BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13202
(242 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|170041357|ref|XP_001848432.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167864941|gb|EDS28324.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 1034
Score = 144 bits (363), Expect = 3e-32, Method: Composition-based stats.
Identities = 88/252 (34%), Positives = 129/252 (51%), Gaps = 44/252 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL A Q+++ AI P L+ +KL+L+ H R ED+HEFL YL+E + +SYL
Sbjct: 186 MAKTLLASQSQNQGAIKPYLVYSKLRLVCKHLVLGRQEDAHEFLRYLVEAMEKSYLARFK 245
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
S + L LDI + +S+++AL
Sbjct: 246 NSKEFDQLTKETTPLNQILGGYLRSEVKCLSCQHISTTFQHFEDLLLDIRKANSIEDALD 305
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
+FA+E L +N Y+CE C + ATKQFS+E+ P + LKRF+ + KI+ V++
Sbjct: 306 VYFARERL-EENQYKCEACKKRVAATKQFSLERAPFALCIQLKRFSMMGGKINKHVELRN 364
Query: 143 YLEFGKFMHCRR---NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV 199
L+ + + LVS V H G++ GHY IG T SGSY+ F D V+ ++Q V
Sbjct: 365 RLDLSPYCKTGKLTYRLVSMVTHLGNTQHCGHYTAIGGTESGSYYVFDDSSVRPISMQNV 424
Query: 200 --TNAYVVIYEL 209
TNAY++ YEL
Sbjct: 425 TSTNAYIIFYEL 436
>gi|157131284|ref|XP_001662174.1| hypothetical protein AaeL_AAEL002698 [Aedes aegypti]
gi|108881830|gb|EAT46055.1| AAEL002698-PA [Aedes aegypti]
Length = 1100
Score = 144 bits (362), Expect = 5e-32, Method: Compositional matrix adjust.
Identities = 94/257 (36%), Positives = 131/257 (50%), Gaps = 49/257 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL A Q S +I P L+++KL+L+ H R ED+HEFL YL+E + +SYL
Sbjct: 249 MAKTLMASQNSSQGSIKPYLVVSKLQLVCKHLVPGRQEDAHEFLRYLVEAMEKSYLARFK 308
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
S L+ L LDI +++S++EAL
Sbjct: 309 NSKELDQYSKETTPLNQILGGYLRSEVKCLSCHHVSTTFQHFEDLLLDIRKVNSIEEALT 368
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
+FA+E L + Y+CE C K ATKQFS+E+ P + LKRF+ + KI+ V++
Sbjct: 369 MYFARERL-EEMQYKCEACKKKVAATKQFSLERAPFALCIQLKRFSMMGNKINKHVELKT 427
Query: 143 YLEFGKFM------HCRRN--LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQAS 194
L+ F +CR LVS V H GS+ GHY IG T SG+Y+ F D V+
Sbjct: 428 RLDLTPFSSKSAVSNCRLTYKLVSMVTHLGSTQHCGHYTAIGGTESGTYYVFDDSLVRPI 487
Query: 195 NLQQV--TNAYVVIYEL 209
+LQ V TNAY++ YEL
Sbjct: 488 SLQNVTSTNAYIIFYEL 504
>gi|321479440|gb|EFX90396.1| hypothetical protein DAPPUDRAFT_39928 [Daphnia pulex]
Length = 447
Score = 139 bits (351), Expect = 7e-31, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 130/258 (50%), Gaps = 47/258 (18%)
Query: 3 KTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS 62
KTL + +SGS I P L+ N+LKLI H + R ED+HEF+ YL+E + ++YL+ + G+
Sbjct: 186 KTLQSTHDKSGSVIKPILVYNRLKLICKHLVHGRQEDAHEFMRYLMEAMEKAYLQSVGGT 245
Query: 63 ---------NNL----------------------------ELSLDIYQLSSLDEALGQFF 85
N L ++ LDI S+LD+ALG +F
Sbjct: 246 KLDSRSKETNPLGQIFGGYIRTEVTCLKCKHTSTTFQHFQDIPLDIQHASTLDDALGHYF 305
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLE 145
+E L DN Y+CEKC K ATK+FSIE+ P V + LKRF + K+S +Q L
Sbjct: 306 RRERLEGDNAYKCEKCKSKVPATKKFSIERAPNVLCIQLKRFGLMGGKMSKHIQFSRNLN 365
Query: 146 FGKFMHCRRN--------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQ--ASN 195
+F+ + + VS + H G S GHY I S+G + F D V+ + N
Sbjct: 366 LNRFLFHQSSGGPCVTYKFVSLINHMGPSQHCGHYTAIAEASNGQLYLFDDCSVRLISLN 425
Query: 196 LQQVTNAYVVIYELLPSS 213
+ T AYV+IYE + SS
Sbjct: 426 VAMSTGAYVLIYEKVQSS 443
>gi|357619275|gb|EHJ71919.1| hypothetical protein KGM_06054 [Danaus plexippus]
Length = 880
Score = 137 bits (345), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 91/255 (35%), Positives = 125/255 (49%), Gaps = 48/255 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
MR TL A Q G+AI P + +KL+LI H R ED+HEFL YL+E + + YL +
Sbjct: 173 MRATLMATQKSGGAAIKPWQVYSKLRLICKHLTPGRQEDAHEFLRYLVEAMEKCYLSRLI 232
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
++ L+ L LDI + S+LDEAL
Sbjct: 233 NADKLDQYSKETTPLNQILGGYLRSTVRCLACHHLSTTYQHFQDLLLDIRKHSTLDEALD 292
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
FF++E L D Y+CE C K ATKQF IE+ P+V + LKRF+ K+S VQ
Sbjct: 293 SFFSRERL-EDLGYKCEACNKKVSATKQFFIERAPMVLCIALKRFSLAGGKLSKHVQFRK 351
Query: 143 YLEFGKFMHCRRN-------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
+ K+++ + N LVS V H G S SGHY IG + +Y+ F D V+
Sbjct: 352 KINLNKYIYNKNNPHQLSYKLVSLVTHLGPSQNSGHYTAIGQAPNSNYYQFDDSCVRPIP 411
Query: 196 LQQV--TNAYVVIYE 208
L V TNAY++ +E
Sbjct: 412 LSAVLGTNAYIMFFE 426
>gi|345485737|ref|XP_003425327.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like isoform 2
[Nasonia vitripennis]
Length = 888
Score = 131 bits (330), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 132/272 (48%), Gaps = 55/272 (20%)
Query: 3 KTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------ 56
KTL +SG AI P + NKLKLI + ED+HEFL YL+EG+ ++YL
Sbjct: 186 KTLQFSHQKSGEAIKPFYVYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYLARHKAL 245
Query: 57 ------KVISGSNNL-------------------------ELSLDIYQLSSLDEALGQFF 85
K + N + +L LDI + +LDEAL +F
Sbjct: 246 KLDSYSKETTPINQIFGGYIRTEVKCLQCKHVSTTFQHFQDLLLDIRKAGTLDEALAGYF 305
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLE 145
++E+L +N Y+CE C + ATKQF +E+PP V + LKRF+ L KIS + ++
Sbjct: 306 SQEHL-DNNDYKCEACKRRVPATKQFILERPPKVLCVQLKRFSVLGGKISRHIGFKQTVD 364
Query: 146 FGKFMHCRRN-----------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQAS 194
G ++ RR L S V H G S GHY I SSG ++ F D V+
Sbjct: 365 MGPYV--RRQPGEQPSKLIYRLASMVTHMGPSVNCGHYTAIAQVSSGKFYSFDDSSVRPI 422
Query: 195 NLQQV--TNAYVVIYELLPSSLHHLNSSLHSS 224
+L V TNAY++I+E+ P+S N H S
Sbjct: 423 SLNNVVSTNAYIMIFEMEPASA--TNGQAHGS 452
>gi|332027218|gb|EGI67307.1| Ubiquitin carboxyl-terminal hydrolase 36 [Acromyrmex echinatior]
Length = 874
Score = 131 bits (329), Expect = 3e-28, Method: Composition-based stats.
Identities = 91/279 (32%), Positives = 135/279 (48%), Gaps = 49/279 (17%)
Query: 3 KTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------ 56
KTL +SG AI P + NKLKLI + ED+HEFL YL+EG+ R+YL
Sbjct: 177 KTLQFSHQKSGGAIKPFYVYNKLKLICRTMVPGQQEDAHEFLRYLLEGMERAYLTKHKAT 236
Query: 57 -------------KVISGSNNLE------------------LSLDIYQLSSLDEALGQFF 85
++ G E L +DI + ++LDEAL +F
Sbjct: 237 KLDNYSKETTPINQIFGGYIRTEVKCLQCQHVSTTFQHFQDLLVDIRKANTLDEALNSYF 296
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLE 145
++E L +N Y+CE C + ATKQF++E+PP V + LKRF+YL KIS + ++
Sbjct: 297 SREQL-DNNDYKCEACKRRVPATKQFTLERPPKVLCVQLKRFSYLGGKISRHIGFKQTID 355
Query: 146 FGKFM---------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNL 196
G+++ L+S V H G S GHY I SSG Y+ F D V+ +L
Sbjct: 356 MGQYLWREPGESPKQLTYKLMSMVTHMGPSVNCGHYTAIAQVSSGQYYSFDDSCVRPISL 415
Query: 197 QQV--TNAYVVIYELLPSSLHHLNSSLHSSSPGSVEPRT 233
V TNAY++I+E+ S + ++ ++ P +
Sbjct: 416 NNVLSTNAYIMIFEMENDSQTQQTAKMNGTTSAKNMPTS 454
>gi|345485740|ref|XP_003425328.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like isoform 3
[Nasonia vitripennis]
Length = 895
Score = 131 bits (329), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 94/272 (34%), Positives = 132/272 (48%), Gaps = 55/272 (20%)
Query: 3 KTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------ 56
KTL +SG AI P + NKLKLI + ED+HEFL YL+EG+ ++YL
Sbjct: 186 KTLQFSHQKSGEAIKPFYVYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYLARHKAL 245
Query: 57 ------KVISGSNNL-------------------------ELSLDIYQLSSLDEALGQFF 85
K + N + +L LDI + +LDEAL +F
Sbjct: 246 KLDSYSKETTPINQIFGGYIRTEVKCLQCKHVSTTFQHFQDLLLDIRKAGTLDEALAGYF 305
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLE 145
++E+L +N Y+CE C + ATKQF +E+PP V + LKRF+ L KIS + ++
Sbjct: 306 SQEHL-DNNDYKCEACKRRVPATKQFILERPPKVLCVQLKRFSVLGGKISRHIGFKQTVD 364
Query: 146 FGKFMHCRRN-----------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQAS 194
G ++ RR L S V H G S GHY I SSG ++ F D V+
Sbjct: 365 MGPYV--RRQPGEQPSKLIYRLASMVTHMGPSVNCGHYTAIAQVSSGKFYSFDDSSVRPI 422
Query: 195 NLQQV--TNAYVVIYELLPSSLHHLNSSLHSS 224
+L V TNAY++I+E+ P+S N H S
Sbjct: 423 SLNNVVSTNAYIMIFEMEPASA--TNGQAHGS 452
>gi|194750190|ref|XP_001957513.1| GF23992 [Drosophila ananassae]
gi|251765094|sp|B3M3M6.1|UBP36_DROAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|190624795|gb|EDV40319.1| GF23992 [Drosophila ananassae]
Length = 1091
Score = 128 bits (322), Expect = 2e-27, Method: Composition-based stats.
Identities = 95/277 (34%), Positives = 127/277 (45%), Gaps = 60/277 (21%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL A Q + SA+ P LI KLK I H R ED+HEFL +L+E + R+YL
Sbjct: 228 MAKTLQATQT-TQSAVRPFLIYTKLKQICKHMIVGRQEDAHEFLRFLVEAMERAYLMRFR 286
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + SL+EA
Sbjct: 287 NYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKSDSLEEAFE 346
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
+F++E L D Y+CE C K ATKQF +E+ PI + LKRF+ + K++ +
Sbjct: 347 GYFSREKL-EDFGYKCEGCKKKVSATKQFRLERAPITLCIQLKRFSMMGNKLTKQITFKP 405
Query: 143 YLEFGKFMHCR---------RNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ KF LVS V H G S GHY IGST +GSY+ F D V+
Sbjct: 406 RIDLSKFAARSPAASVQPLIYRLVSMVTHLGVSQHCGHYTAIGSTEAGSYYNFDDSYVRP 465
Query: 194 SNLQQV--TNAYVVIYELLPSSLHHLNSSLHSSSPGS 228
+Q V TNAY++ YEL P L +SSP +
Sbjct: 466 IAIQSVCNTNAYIMFYELDP---------LQTSSPAA 493
>gi|380012929|ref|XP_003690525.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Apis
florea]
Length = 884
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 126/255 (49%), Gaps = 49/255 (19%)
Query: 3 KTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------ 56
KTL +SG AI P I NKLKLI + ED+HEFL YL+EG+ ++YL
Sbjct: 178 KTLQFSHQKSGCAIKPFYIYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYLARHKAS 237
Query: 57 ------KVISGSNNL-------------------------ELSLDIYQLSSLDEALGQFF 85
K + N + +L +DI + S+LDEAL +F
Sbjct: 238 KLDSYSKETTPINQIFGGYIRTEVKCLQCRHVSTTFQHFQDLLVDIRKASTLDEALSSYF 297
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLE 145
++E L +N Y+CE C + ATKQFS+E+PP V + LKRF+ L KIS + ++
Sbjct: 298 SREQL-DNNDYKCEACKRRVPATKQFSLERPPKVLCVQLKRFSVLGGKISKHIGFKQTID 356
Query: 146 FGKFMHCRRN---------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNL 196
G ++ L+S V H G S GHY + S+G Y+ F D V+ +L
Sbjct: 357 MGPYLWKEPGEPSQSLTYKLMSIVTHMGPSVNCGHYTAVAKVSTGQYYSFDDSCVRPLSL 416
Query: 197 QQV--TNAYVVIYEL 209
V TNAY++I+E+
Sbjct: 417 SNVLSTNAYIMIFEM 431
>gi|328777507|ref|XP_001120426.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Apis
mellifera]
Length = 884
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 88/255 (34%), Positives = 126/255 (49%), Gaps = 49/255 (19%)
Query: 3 KTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------ 56
KTL +SG AI P I NKLKLI + ED+HEFL YL+EG+ ++YL
Sbjct: 178 KTLQFSHQKSGCAIKPFYIYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYLARHKAS 237
Query: 57 ------KVISGSNNL-------------------------ELSLDIYQLSSLDEALGQFF 85
K + N + +L +DI + S+LDEAL +F
Sbjct: 238 KLDSYSKETTPINQIFGGYIRTEVKCLQCRHVSTTFQHFQDLLVDIRKASTLDEALSSYF 297
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLE 145
++E L +N Y+CE C + ATKQFS+E+PP V + LKRF+ L KIS + ++
Sbjct: 298 SREQL-DNNDYKCEACKRRVPATKQFSLERPPKVLCVQLKRFSVLGGKISKHIGFKQTID 356
Query: 146 FGKFMHCRRN---------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNL 196
G ++ L+S V H G S GHY + S+G Y+ F D V+ +L
Sbjct: 357 MGPYLWKEPGESSQSLTYKLMSIVTHMGPSVNCGHYTAVAKVSTGQYYSFDDSCVRPLSL 416
Query: 197 QQV--TNAYVVIYEL 209
V TNAY++I+E+
Sbjct: 417 SNVLSTNAYIMIFEM 431
>gi|156547946|ref|XP_001604800.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like isoform 1
[Nasonia vitripennis]
Length = 881
Score = 127 bits (319), Expect = 4e-27, Method: Composition-based stats.
Identities = 91/261 (34%), Positives = 128/261 (49%), Gaps = 53/261 (20%)
Query: 3 KTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------ 56
KTL +SG AI P + NKLKLI + ED+HEFL YL+EG+ ++YL
Sbjct: 179 KTLQFSHQKSGEAIKPFYVYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYLARHKAL 238
Query: 57 -------------KVISGSNNLE------------------LSLDIYQLSSLDEALGQFF 85
++ G E L LDI + +LDEAL +F
Sbjct: 239 KLDSYSKETTPINQIFGGYIRTEVKCLQCKHVSTTFQHFQDLLLDIRKAGTLDEALAGYF 298
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLE 145
++E+L +N Y+CE C + ATKQF +E+PP V + LKRF+ L KIS + ++
Sbjct: 299 SQEHL-DNNDYKCEACKRRVPATKQFILERPPKVLCVQLKRFSVLGGKISRHIGFKQTVD 357
Query: 146 FGKFMHCRRN-----------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQAS 194
G ++ RR L S V H G S GHY I SSG ++ F D V+
Sbjct: 358 MGPYV--RRQPGEQPSKLIYRLASMVTHMGPSVNCGHYTAIAQVSSGKFYSFDDSSVRPI 415
Query: 195 NLQQV--TNAYVVIYELLPSS 213
+L V TNAY++I+E+ P+S
Sbjct: 416 SLNNVVSTNAYIMIFEMEPAS 436
>gi|158285526|ref|XP_001237068.2| AGAP007521-PB [Anopheles gambiae str. PEST]
gi|157020034|gb|EAU77612.2| AGAP007521-PB [Anopheles gambiae str. PEST]
Length = 1053
Score = 127 bits (319), Expect = 4e-27, Method: Composition-based stats.
Identities = 89/258 (34%), Positives = 124/258 (48%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL Q+ +A P L+ +KL+L+ H R ED+HEFL YL+E + +SY+
Sbjct: 225 MAKTLLESQSNQ-TAFRPYLVYSKLRLVCKHLVPGRQEDAHEFLRYLVEAMEKSYIGRTK 283
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
S L+ L LDI + +S+DEAL
Sbjct: 284 NSKELDQYSKETTPLNQILGGYLRSEVKCLSCQHVSTTFQHFEDLLLDIRKANSIDEALE 343
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
+FA+E L + Y+CE C + ATKQFS+E+ P V + LKRF+ L KI+ V++
Sbjct: 344 LYFARERL-EEMGYKCEACKRRVAATKQFSLERAPFVLCVQLKRFSMLGAKINKHVELRS 402
Query: 143 YLEFGKFMH--CRRN-------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
L+ + R N L S V H GS+ GHY IG T +G YH F D V+
Sbjct: 403 KLDLTPYSSPAMRSNGGKLTYRLTSMVTHLGSTQHCGHYTAIGHTDAGGYHVFDDSSVRP 462
Query: 194 SNLQQV--TNAYVVIYEL 209
+ V TNAY++ YEL
Sbjct: 463 IGIHNVMSTNAYILFYEL 480
>gi|350421826|ref|XP_003492969.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Bombus
impatiens]
Length = 875
Score = 126 bits (317), Expect = 7e-27, Method: Composition-based stats.
Identities = 88/255 (34%), Positives = 126/255 (49%), Gaps = 49/255 (19%)
Query: 3 KTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------ 56
KTL + +SG AI P I NKLKLI + ED+HEFL YL+EG+ ++YL
Sbjct: 178 KTLQSSHQKSGCAIKPFYIYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYLARHKAS 237
Query: 57 -------------KVISGSNNLE------------------LSLDIYQLSSLDEALGQFF 85
++ G E L +DI + S+LDEAL +F
Sbjct: 238 KLDSYSKETTPINQIFGGYIRTEVKCLQCRHVSTTFQHFQDLLVDIRKASTLDEALSSYF 297
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLE 145
++E L +N Y+CE C + ATKQFS+E+PP V + LKRF+ L KIS + ++
Sbjct: 298 SREQL-DNNDYKCEACKRRVPATKQFSLERPPKVLCVQLKRFSVLGGKISKHIGFKQTID 356
Query: 146 FGKFM---------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNL 196
G ++ L+S V H G S GHY + S+G Y+ F D V+ +L
Sbjct: 357 MGPYLWKEPGEPTQSLTYKLMSIVTHMGPSVNCGHYTAVAKVSTGQYYSFDDSCVRPLSL 416
Query: 197 QQV--TNAYVVIYEL 209
V TNAY++I+E+
Sbjct: 417 SNVFSTNAYIMIFEM 431
>gi|195492054|ref|XP_002093826.1| GE21508 [Drosophila yakuba]
gi|251765138|sp|B4PIW8.1|UBP36_DROYA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|194179927|gb|EDW93538.1| GE21508 [Drosophila yakuba]
Length = 1082
Score = 126 bits (317), Expect = 7e-27, Method: Composition-based stats.
Identities = 89/258 (34%), Positives = 122/258 (47%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL A Q+ SA+ P LI +KLK I H R ED+HEFL +L+E + R+YL
Sbjct: 225 MAKTLLATQSNQ-SAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFR 283
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + SL++A
Sbjct: 284 NYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFE 343
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ + +
Sbjct: 344 GHFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGNKLTKQISLKP 402
Query: 143 YLEFGKFMH---------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ K+ LVS V H G S GHY IGST +GSY+ F D V+
Sbjct: 403 RIDLSKYAARSPAAQAQPLTYRLVSMVTHLGVSQHCGHYTAIGSTDTGSYYNFDDSYVRP 462
Query: 194 SNLQQV--TNAYVVIYEL 209
+Q V TNAY++ YEL
Sbjct: 463 IAMQSVCNTNAYIMFYEL 480
>gi|158285524|ref|XP_001687904.1| AGAP007521-PA [Anopheles gambiae str. PEST]
gi|157020033|gb|EDO64553.1| AGAP007521-PA [Anopheles gambiae str. PEST]
Length = 1219
Score = 126 bits (317), Expect = 8e-27, Method: Composition-based stats.
Identities = 89/258 (34%), Positives = 124/258 (48%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL Q+ +A P L+ +KL+L+ H R ED+HEFL YL+E + +SY+
Sbjct: 271 MAKTLLESQSNQ-TAFRPYLVYSKLRLVCKHLVPGRQEDAHEFLRYLVEAMEKSYIGRTK 329
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
S L+ L LDI + +S+DEAL
Sbjct: 330 NSKELDQYSKETTPLNQILGGYLRSEVKCLSCQHVSTTFQHFEDLLLDIRKANSIDEALE 389
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
+FA+E L + Y+CE C + ATKQFS+E+ P V + LKRF+ L KI+ V++
Sbjct: 390 LYFARERL-EEMGYKCEACKRRVAATKQFSLERAPFVLCVQLKRFSMLGAKINKHVELRS 448
Query: 143 YLEFGKFMH--CRRN-------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
L+ + R N L S V H GS+ GHY IG T +G YH F D V+
Sbjct: 449 KLDLTPYSSPAMRSNGGKLTYRLTSMVTHLGSTQHCGHYTAIGHTDAGGYHVFDDSSVRP 508
Query: 194 SNLQQV--TNAYVVIYEL 209
+ V TNAY++ YEL
Sbjct: 509 IGIHNVMSTNAYILFYEL 526
>gi|91078882|ref|XP_972954.1| PREDICTED: similar to Ubiquitin-specific protease 36 CG5505-PA
[Tribolium castaneum]
gi|270003709|gb|EFA00157.1| hypothetical protein TcasGA2_TC002978 [Tribolium castaneum]
Length = 739
Score = 126 bits (316), Expect = 8e-27, Method: Compositional matrix adjust.
Identities = 89/283 (31%), Positives = 135/283 (47%), Gaps = 47/283 (16%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
MRKTL Q + + I P LI NKL+L+ + R ED+HEFL YL+E + +SYL
Sbjct: 161 MRKTLQDSQQRNTNTIRPLLIYNKLRLVCRNLIPGRQEDAHEFLRYLVEAMEKSYLSRFK 220
Query: 57 ---------KVISGSNNL-------------------------ELSLDIYQLSSLDEALG 82
K + N + +L LDI + +LDEAL
Sbjct: 221 NHSEFDSKVKETTPLNQILGGYLRSAVRCLKCGHVSTTFQHFQDLLLDIRKAQTLDEALE 280
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
+F++E L D+ Y C+ C K ATKQFS+E+ P+V + LKRF+ KI+ +
Sbjct: 281 GYFSREKL-DDDSYHCQSCQKKVPATKQFSLERAPMVLCIQLKRFSVSNNKITKHIHFRQ 339
Query: 143 YLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNL 196
L+ ++ R + LV+ V H G + GHY + SG+++ F D V+ +
Sbjct: 340 RLDLTRYARHRPSVPLIYRLVALVTHMGPTVNCGHYTAVAQAPSGNFYQFDDSMVRVISH 399
Query: 197 QQV--TNAYVVIYELLPSSLHHLNSSLHSSSPGSVEPRTHHRN 237
Q V TNAY+++YEL S N+ ++ + P + N
Sbjct: 400 QAVFNTNAYIMLYELESSPFTKSNNGTNNKIKPPLSPEANTSN 442
>gi|340716721|ref|XP_003396843.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Bombus
terrestris]
Length = 875
Score = 126 bits (316), Expect = 9e-27, Method: Composition-based stats.
Identities = 88/255 (34%), Positives = 126/255 (49%), Gaps = 49/255 (19%)
Query: 3 KTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------ 56
KTL + +SG AI P I NKLKLI + ED+HEFL YL+EG+ ++YL
Sbjct: 178 KTLQSSHQKSGCAIKPFYIYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYLARHKAS 237
Query: 57 -------------KVISGSNNLE------------------LSLDIYQLSSLDEALGQFF 85
++ G E L +DI + S+LDEAL +F
Sbjct: 238 KLDSYSKETTPINQIFGGYIRTEVKCLQCRHVSTTFQHFQDLLVDIRKASTLDEALSSYF 297
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLE 145
++E L +N Y+CE C + ATKQFS+E+PP V + LKRF+ L KIS + ++
Sbjct: 298 SREQL-DNNDYKCEACKRRVPATKQFSLERPPKVLCVQLKRFSVLGGKISKHIGFKQTID 356
Query: 146 FGKFM---------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNL 196
G ++ L+S V H G S GHY + S+G Y+ F D V+ +L
Sbjct: 357 MGPYLWKEPGEPTQSLTYKLMSIVTHMGPSVNCGHYTAVAKVSTGQYYSFDDSCVRPLSL 416
Query: 197 QQV--TNAYVVIYEL 209
V TNAY++I+E+
Sbjct: 417 SNVFSTNAYIMIFEM 431
>gi|242004654|ref|XP_002423195.1| ubiquitin carboxyl-terminal hydrolase DUB-1, putative [Pediculus
humanus corporis]
gi|212506160|gb|EEB10457.1| ubiquitin carboxyl-terminal hydrolase DUB-1, putative [Pediculus
humanus corporis]
Length = 479
Score = 126 bits (316), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 84/255 (32%), Positives = 126/255 (49%), Gaps = 48/255 (18%)
Query: 3 KTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS 62
KTL Q ++G+ + P + +KLK I H + ED+HEF+ YL+E + ++YL G
Sbjct: 173 KTLKCSQQKTGNCMKPISVYSKLKAICKHLSHGSQEDAHEFMRYLLESLEKNYLTRFQGH 232
Query: 63 ------------NNL-------------------------ELSLDIYQLSSLDEALGQFF 85
N + +L LDI + S+L++AL +F
Sbjct: 233 KLDSTSKETTPINQIFGGYIRTEVVCLSCRAVSTTFQHFQDLPLDIRKASTLNDALAGYF 292
Query: 86 AKEYLVR-DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYL 144
+E L ++ Y CEKC K K+F+IEKPP V + LKRF+ KI+ VQ+P YL
Sbjct: 293 ERERLPDGEDAYNCEKCNRKVSVYKKFTIEKPPNVLCVQLKRFSMTNGKITKQVQLPQYL 352
Query: 145 EFGKF----MHCRR----NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNL 196
+ +F +H R LVS + H G S GHY I ++GSY+ F D V+ L
Sbjct: 353 DITRFISTSIHPRHPVKYKLVSMITHMGQSVNCGHYTAIALAANGSYYQFDDSSVRQIPL 412
Query: 197 QQV--TNAYVVIYEL 209
V +AY+++YE+
Sbjct: 413 STVLSMSAYLILYEM 427
>gi|328723134|ref|XP_001946077.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like
[Acyrthosiphon pisum]
Length = 920
Score = 125 bits (315), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 91/267 (34%), Positives = 129/267 (48%), Gaps = 60/267 (22%)
Query: 4 TLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS- 62
T Q +GS+ +I N+L LI H YR ED+HEFL YLIE + R YL V+ +
Sbjct: 181 TFTLSQKHTGSSFKASIITNRLSLICKHLSTYRQEDAHEFLRYLIESMERCYLSVLGHAA 240
Query: 63 -------------NNL-------------------------ELSLDIYQLSSLDEALGQF 84
N + +L LDI ++++AL +
Sbjct: 241 KSLDNYSKETTPINQIFGGYIRTEVTCGKCGHISTTFQHFQDLILDIRHSDNVNDALDNY 300
Query: 85 FAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFN-----YLCLKISCAVQ 139
F KE L D Y CE+C + A K+FSIE+ P V + LKR++ + K S A+Q
Sbjct: 301 FEKEPL--DESYVCERCRRQVAADKKFSIERAPNVLCIQLKRYSVGMGGFSGNKNSKAIQ 358
Query: 140 VPLYLEFG--KFMH---------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGD 188
+ L+ +F H R +LVS VIH+GSS SGHY +G T SGSY+YF D
Sbjct: 359 INERLDLSSYQFDHHKFKIDARPLRYHLVSMVIHYGSSLHSGHYTTLGLTPSGSYYYFND 418
Query: 189 DRVQASNLQQVT---NAYVVIYELLPS 212
V +N + + ++Y++ YEL PS
Sbjct: 419 SNVYQTNFKNYSTSNDSYIIFYELEPS 445
>gi|194867188|ref|XP_001972018.1| GG15285 [Drosophila erecta]
gi|251765095|sp|B3NC86.1|UBP36_DROER RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|190653801|gb|EDV51044.1| GG15285 [Drosophila erecta]
Length = 1085
Score = 124 bits (312), Expect = 3e-26, Method: Composition-based stats.
Identities = 88/258 (34%), Positives = 121/258 (46%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL A Q+ SA+ P LI +KLK I H R ED+HEFL +L+E + R+YL
Sbjct: 225 MAKTLLATQSNQ-SAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFR 283
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + +L++A
Sbjct: 284 NYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADTLEDAFE 343
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 344 GHFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGNKLTKQISFKP 402
Query: 143 YLEFGKFMH---------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ K+ LVS V H G S GHY IGST +GSY+ F D V+
Sbjct: 403 RIDLSKYAARSPAAQAQPLTYRLVSMVTHLGVSQHCGHYTAIGSTDTGSYYNFDDSYVRP 462
Query: 194 SNLQQV--TNAYVVIYEL 209
+Q V TNAY++ YEL
Sbjct: 463 IAMQSVCNTNAYIMFYEL 480
>gi|383858607|ref|XP_003704791.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Megachile
rotundata]
Length = 880
Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats.
Identities = 97/291 (33%), Positives = 140/291 (48%), Gaps = 61/291 (20%)
Query: 3 KTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------ 56
KTL +SG AI P I NKLKLI + ED+HEFL YL+EG+ ++YL
Sbjct: 178 KTLQFSHQKSGCAIKPFYIYNKLKLICRTMVPGQQEDAHEFLRYLLEGMEKAYLTRHKAS 237
Query: 57 -------------KVISGSNNLE------------------LSLDIYQLSSLDEALGQFF 85
++ G E L +DI + S+LDEAL +F
Sbjct: 238 KLDSYSKETTPINQIFGGYIRTEVKCLQCRHVSTTFQHFQDLLVDIRKASTLDEALTSYF 297
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLE 145
++E L +N Y+CE C + ATKQFS+E+PP V + LKRF+ L KIS + ++
Sbjct: 298 SREQL-DNNDYKCEACKKRVPATKQFSLERPPKVLCVQLKRFSVLGGKISKHIGFKQSID 356
Query: 146 FGKFM---------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNL 196
G ++ L+S V H G S GHY + S+G Y+ F D V+ +L
Sbjct: 357 MGPYLWREPGEPIQPLTYKLMSIVTHMGPSVNCGHYTAVAKVSTGQYYSFDDSCVRPISL 416
Query: 197 QQV--TNAYVVIYEL---LPSSLH-----HLNSSLHS----SSPGSVEPRT 233
+ TNAY++I+E+ PS + LN ++ SSPGS + +T
Sbjct: 417 SNMLSTNAYIMIFEMEQQTPSQVQTQQTVKLNGTVTVNNTISSPGSPKNKT 467
>gi|195588034|ref|XP_002083763.1| GD13899 [Drosophila simulans]
gi|251765135|sp|B4QIS3.1|UBP36_DROSI RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|194195772|gb|EDX09348.1| GD13899 [Drosophila simulans]
Length = 988
Score = 124 bits (311), Expect = 3e-26, Method: Composition-based stats.
Identities = 87/258 (33%), Positives = 122/258 (47%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL A Q+ SA+ P LI +KLK I H R ED+HEFL +L+E + R+YL
Sbjct: 130 MAKTLLATQSNQ-SAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFR 188
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + SL++A
Sbjct: 189 NYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFE 248
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 249 GHFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGNKLTKQISFKP 307
Query: 143 YLEFGKFMH---------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ K+ LVS V H G+S GHY IGST +GS++ F D V+
Sbjct: 308 RIDLSKYAARSPAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRP 367
Query: 194 SNLQQV--TNAYVVIYEL 209
+Q V TNAY++ +EL
Sbjct: 368 ITMQNVCNTNAYIMFFEL 385
>gi|442630420|ref|NP_647986.3| scrawny, isoform J [Drosophila melanogaster]
gi|440215343|gb|AAN12110.2| scrawny, isoform J [Drosophila melanogaster]
Length = 906
Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats.
Identities = 86/258 (33%), Positives = 122/258 (47%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL A Q+ SA+ P LI +KLK I H R ED+HEFL +L+E + R+YL
Sbjct: 154 MTKTLLATQSNQ-SAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFR 212
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + SL++A
Sbjct: 213 NYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFE 272
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 273 GHFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGNKLTKQISFKS 331
Query: 143 YLEFGKFMHCRR---------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ K+ + LVS V H G+S GHY IGST +GS++ F D V+
Sbjct: 332 RIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRP 391
Query: 194 SNLQQV--TNAYVVIYEL 209
+ V TNAY++ +EL
Sbjct: 392 IAMHSVCNTNAYIMFFEL 409
>gi|386770655|ref|NP_001246639.1| scrawny, isoform G [Drosophila melanogaster]
gi|386770657|ref|NP_001246640.1| scrawny, isoform H [Drosophila melanogaster]
gi|383291776|gb|AFH04310.1| scrawny, isoform G [Drosophila melanogaster]
gi|383291777|gb|AFH04311.1| scrawny, isoform H [Drosophila melanogaster]
Length = 976
Score = 123 bits (309), Expect = 5e-26, Method: Composition-based stats.
Identities = 86/258 (33%), Positives = 122/258 (47%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL A Q+ SA+ P LI +KLK I H R ED+HEFL +L+E + R+YL
Sbjct: 224 MTKTLLATQSNQ-SAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFR 282
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + SL++A
Sbjct: 283 NYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFE 342
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 343 GHFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGNKLTKQISFKS 401
Query: 143 YLEFGKFMHCRR---------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ K+ + LVS V H G+S GHY IGST +GS++ F D V+
Sbjct: 402 RIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRP 461
Query: 194 SNLQQV--TNAYVVIYEL 209
+ V TNAY++ +EL
Sbjct: 462 IAMHSVCNTNAYIMFFEL 479
>gi|442630418|ref|NP_729093.2| scrawny, isoform I [Drosophila melanogaster]
gi|440215342|gb|AAN12108.2| scrawny, isoform I [Drosophila melanogaster]
Length = 886
Score = 123 bits (309), Expect = 7e-26, Method: Composition-based stats.
Identities = 86/258 (33%), Positives = 122/258 (47%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL A Q+ SA+ P LI +KLK I H R ED+HEFL +L+E + R+YL
Sbjct: 134 MTKTLLATQSNQ-SAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFR 192
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + SL++A
Sbjct: 193 NYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFE 252
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 253 GHFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGNKLTKQISFKS 311
Query: 143 YLEFGKFMHCRR---------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ K+ + LVS V H G+S GHY IGST +GS++ F D V+
Sbjct: 312 RIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRP 371
Query: 194 SNLQQV--TNAYVVIYEL 209
+ V TNAY++ +EL
Sbjct: 372 IAMHSVCNTNAYIMFFEL 389
>gi|74870609|sp|Q9VRP5.2|UBP36_DROME RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
Length = 1085
Score = 123 bits (308), Expect = 7e-26, Method: Composition-based stats.
Identities = 86/258 (33%), Positives = 122/258 (47%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL A Q+ SA+ P LI +KLK I H R ED+HEFL +L+E + R+YL
Sbjct: 224 MTKTLLATQSNQ-SAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFR 282
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + SL++A
Sbjct: 283 NYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFE 342
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 343 GHFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGNKLTKQISFKS 401
Query: 143 YLEFGKFMHCRR---------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ K+ + LVS V H G+S GHY IGST +GS++ F D V+
Sbjct: 402 RIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRP 461
Query: 194 SNLQQV--TNAYVVIYEL 209
+ V TNAY++ +EL
Sbjct: 462 IAMHSVCNTNAYIMFFEL 479
>gi|28416398|gb|AAO42671.1| AT31021p [Drosophila melanogaster]
Length = 1038
Score = 123 bits (308), Expect = 8e-26, Method: Composition-based stats.
Identities = 86/258 (33%), Positives = 122/258 (47%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL A Q+ SA+ P LI +KLK I H R ED+HEFL +L+E + R+YL
Sbjct: 224 MTKTLLATQSNQ-SAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFR 282
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + SL++A
Sbjct: 283 NYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFE 342
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 343 GHFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGNKLTKQISFKS 401
Query: 143 YLEFGKFMHCRR---------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ K+ + LVS V H G+S GHY IGST +GS++ F D V+
Sbjct: 402 RIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRP 461
Query: 194 SNLQQV--TNAYVVIYEL 209
+ V TNAY++ +EL
Sbjct: 462 IAMHSVCNTNAYIMFFEL 479
>gi|24658645|ref|NP_729095.1| scrawny, isoform B [Drosophila melanogaster]
gi|15292143|gb|AAK93340.1| LD40339p [Drosophila melanogaster]
gi|23094122|gb|AAN12111.1| scrawny, isoform B [Drosophila melanogaster]
gi|220947254|gb|ACL86170.1| Usp36-PB [synthetic construct]
Length = 968
Score = 123 bits (308), Expect = 8e-26, Method: Composition-based stats.
Identities = 86/258 (33%), Positives = 122/258 (47%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL A Q+ SA+ P LI +KLK I H R ED+HEFL +L+E + R+YL
Sbjct: 154 MTKTLLATQSNQ-SAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFR 212
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + SL++A
Sbjct: 213 NYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFE 272
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 273 GHFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGNKLTKQISFKS 331
Query: 143 YLEFGKFMHCRR---------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ K+ + LVS V H G+S GHY IGST +GS++ F D V+
Sbjct: 332 RIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRP 391
Query: 194 SNLQQV--TNAYVVIYEL 209
+ V TNAY++ +EL
Sbjct: 392 IAMHSVCNTNAYIMFFEL 409
>gi|33589646|gb|AAQ22589.1| AT24152p [Drosophila melanogaster]
Length = 948
Score = 123 bits (308), Expect = 9e-26, Method: Composition-based stats.
Identities = 86/258 (33%), Positives = 122/258 (47%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL A Q+ SA+ P LI +KLK I H R ED+HEFL +L+E + R+YL
Sbjct: 134 MTKTLLATQSNQ-SAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFR 192
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + SL++A
Sbjct: 193 NYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFE 252
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 253 GHFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGNKLTKQISFKS 311
Query: 143 YLEFGKFMHCRR---------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ K+ + LVS V H G+S GHY IGST +GS++ F D V+
Sbjct: 312 RIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRP 371
Query: 194 SNLQQV--TNAYVVIYEL 209
+ V TNAY++ +EL
Sbjct: 372 IAMHSVCNTNAYIMFFEL 389
>gi|24658617|ref|NP_729092.1| scrawny, isoform D [Drosophila melanogaster]
gi|23094118|gb|AAN12107.1| scrawny, isoform D [Drosophila melanogaster]
gi|209447207|gb|ACI47091.1| FI06147p [Drosophila melanogaster]
Length = 1038
Score = 122 bits (307), Expect = 9e-26, Method: Composition-based stats.
Identities = 86/258 (33%), Positives = 122/258 (47%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL A Q+ SA+ P LI +KLK I H R ED+HEFL +L+E + R+YL
Sbjct: 224 MTKTLLATQSNQ-SAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFR 282
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + SL++A
Sbjct: 283 NYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFE 342
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 343 GHFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGNKLTKQISFKS 401
Query: 143 YLEFGKFMHCRR---------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ K+ + LVS V H G+S GHY IGST +GS++ F D V+
Sbjct: 402 RIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRP 461
Query: 194 SNLQQV--TNAYVVIYEL 209
+ V TNAY++ +EL
Sbjct: 462 IAMHSVCNTNAYIMFFEL 479
>gi|24658632|ref|NP_729094.1| scrawny, isoform C [Drosophila melanogaster]
gi|23094120|gb|AAN12109.1| scrawny, isoform C [Drosophila melanogaster]
Length = 948
Score = 122 bits (307), Expect = 9e-26, Method: Composition-based stats.
Identities = 86/258 (33%), Positives = 122/258 (47%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL A Q+ SA+ P LI +KLK I H R ED+HEFL +L+E + R+YL
Sbjct: 134 MTKTLLATQSNQ-SAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFR 192
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + SL++A
Sbjct: 193 NYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFE 252
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 253 GHFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGNKLTKQISFKS 311
Query: 143 YLEFGKFMHCRR---------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ K+ + LVS V H G+S GHY IGST +GS++ F D V+
Sbjct: 312 RIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRP 371
Query: 194 SNLQQV--TNAYVVIYEL 209
+ V TNAY++ +EL
Sbjct: 372 IAMHSVCNTNAYIMFFEL 389
>gi|307169377|gb|EFN62098.1| Ubiquitin carboxyl-terminal hydrolase 42 [Camponotus floridanus]
Length = 785
Score = 122 bits (307), Expect = 9e-26, Method: Composition-based stats.
Identities = 88/255 (34%), Positives = 124/255 (48%), Gaps = 49/255 (19%)
Query: 3 KTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------ 56
KTL +SG AI P I NKLKLI + ED+HEFL YL+EG+ R+YL
Sbjct: 75 KTLQFSHQKSGGAIKPFYIFNKLKLICRTMVPGQQEDAHEFLRYLLEGMERTYLTRHKAT 134
Query: 57 -------------KVISGSNNLE------------------LSLDIYQLSSLDEALGQFF 85
++ G E L +DI + ++LDEAL +F
Sbjct: 135 KLDSYSKETTPINQIFGGYIRTEVKCLQCQHVSTTFQHFQDLLVDIRKANTLDEALNSYF 194
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLE 145
++E L +N Y+CE C + ATKQF++E+PP V + LKRF+ L KIS + ++
Sbjct: 195 SREQL-DNNDYKCEACKRRVPATKQFTLERPPKVLCVQLKRFSVLGGKISRHIGFKQTID 253
Query: 146 FGKFM---------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNL 196
++ L+S V H G S GHY I SSG Y+ F D V+ +L
Sbjct: 254 MSPYLWREPGESPRPLTYKLMSMVTHMGPSVNCGHYTAIAQVSSGQYYSFDDCCVRPISL 313
Query: 197 QQV--TNAYVVIYEL 209
V TNAY++I+E+
Sbjct: 314 NNVLSTNAYIMIFEM 328
>gi|307193249|gb|EFN76140.1| Ubiquitin carboxyl-terminal hydrolase 36 [Harpegnathos saltator]
Length = 874
Score = 122 bits (306), Expect = 1e-25, Method: Composition-based stats.
Identities = 88/271 (32%), Positives = 132/271 (48%), Gaps = 49/271 (18%)
Query: 3 KTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------ 56
KTL +SG AI P I NKLK I + + ED+HEFL YL+EG+ R+YL
Sbjct: 178 KTLQFSHLKSGGAIKPFHIYNKLKSICRTMMHGQQEDAHEFLRYLLEGMERAYLTRHKAT 237
Query: 57 -------------KVISGSNNLE------------------LSLDIYQLSSLDEALGQFF 85
++ G E L +DI + ++LDEAL +F
Sbjct: 238 KLDSYSKETTPINQIFGGYIRTEVKCLQCQHVSTTFQHFQDLLVDIRKANTLDEALNGYF 297
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLE 145
++E L +N Y+CE C + ATKQF++E+PP V + LKRF+ KIS + ++
Sbjct: 298 SREQL-DNNDYKCEACKRRVPATKQFTLERPPKVLCVQLKRFSVGGGKISRHIGFKQTID 356
Query: 146 FGKFM---------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNL 196
+++ L+S V H G S GHY I SSG Y+ F D V+ +L
Sbjct: 357 MSRYLWREPGESPKQLTYKLMSVVTHMGPSVNCGHYTAIAQVSSGQYYTFDDACVRPISL 416
Query: 197 QQV--TNAYVVIYELLPSSLHHLNSSLHSSS 225
V TNAY++I+E+ SS + + ++ ++
Sbjct: 417 NNVLSTNAYIMIFEMNSSSQNQQTAKVNGTT 447
>gi|312379746|gb|EFR25927.1| hypothetical protein AND_08313 [Anopheles darlingi]
Length = 1237
Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 89/270 (32%), Positives = 121/270 (44%), Gaps = 66/270 (24%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL Q+ SAI P L+ +KL+L+ H R ED+HEFL YL+E + +S+L
Sbjct: 341 MAKTLLDSQSNQ-SAIKPHLVYSKLRLVCKHLVPGRQEDAHEFLRYLVEAMEKSFLGRYK 399
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
S L+ L LDI + +S+DEAL
Sbjct: 400 NSKELDQYSKETTPLNQILGGYLRSEVKCLSCHHISTTFQHFEDLLLDIRRANSIDEALK 459
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
+F +E L + Y CE C + ATKQFS+E+ P V + LKRF KI+ V++
Sbjct: 460 LYFDRERL-EELSYNCEACKKRVAATKQFSLERVPFVLCVQLKRFTINGTKINKHVELRS 518
Query: 143 YLEF---------------------GKFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSG 181
L+ GK + L S V H G+S GHY IG T G
Sbjct: 519 QLDLTPYSSSSSQQQQQRTSGSSSAGKLTY---RLTSMVTHLGTSQHCGHYTAIGQTEGG 575
Query: 182 SYHYFGDDRVQASNLQQV--TNAYVVIYEL 209
+YH F D V+ + V TNAY++ YEL
Sbjct: 576 AYHVFDDSSVRPVGMHNVMSTNAYILFYEL 605
>gi|195127497|ref|XP_002008205.1| GI13361 [Drosophila mojavensis]
gi|251765101|sp|B4KXJ5.1|UBP36_DROMO RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|193919814|gb|EDW18681.1| GI13361 [Drosophila mojavensis]
Length = 1185
Score = 121 bits (304), Expect = 2e-25, Method: Composition-based stats.
Identities = 85/258 (32%), Positives = 119/258 (46%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL Q+ +A+ P LI KL+ I H R ED+HEFL +L+E + ++YL
Sbjct: 253 MAKTLQTTQSNQ-TAVRPFLIYTKLRQICKHMVVGRQEDAHEFLRFLVEAMEKAYLMRFR 311
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + +L+EA
Sbjct: 312 NYKELDQLVKETTPLSQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADTLEEAFD 371
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
+F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 372 GYFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMMGNKLTKQISFKP 430
Query: 143 YLEFGKFMH---------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ +F LVS V H G S GHY IG T SGSY+ F D V+
Sbjct: 431 RIDLSRFAARSPAASTQPLSYRLVSMVTHLGVSQHCGHYTAIGLTESGSYYNFDDSYVRP 490
Query: 194 SNLQQV--TNAYVVIYEL 209
+Q V TNAY++ YEL
Sbjct: 491 IAMQSVCNTNAYIMFYEL 508
>gi|195376439|ref|XP_002047004.1| GJ13192 [Drosophila virilis]
gi|251765136|sp|B4LG38.1|UBP36_DROVI RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|194154162|gb|EDW69346.1| GJ13192 [Drosophila virilis]
Length = 1214
Score = 121 bits (303), Expect = 3e-25, Method: Composition-based stats.
Identities = 85/258 (32%), Positives = 119/258 (46%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL Q+ SA+ P LI KL+ I H R ED+HEFL +L+E + ++YL
Sbjct: 246 MAKTLQTTQSNQ-SAVRPFLIYTKLRQICKHMVVGRQEDAHEFLRFLVEAMEKAYLMRFR 304
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + +L+EA
Sbjct: 305 NFKELDQLVKETTPISQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADTLEEAFD 364
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
+F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 365 GYFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMMGNKLTKQISFKP 423
Query: 143 YLEFGKFMH---------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ +F LVS V H G S GHY IG T +GSY+ F D V+
Sbjct: 424 RIDLSRFAARSPTAAAQPLSYRLVSMVTHLGVSQHCGHYTAIGLTEAGSYYNFDDSYVKP 483
Query: 194 SNLQQV--TNAYVVIYEL 209
+Q V TNAY++ YEL
Sbjct: 484 IAMQSVCNTNAYIMFYEL 501
>gi|195427887|ref|XP_002062008.1| GK17299 [Drosophila willistoni]
gi|251765137|sp|B4MLR8.1|UBP36_DROWI RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|194158093|gb|EDW72994.1| GK17299 [Drosophila willistoni]
Length = 1311
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 125/259 (48%), Gaps = 52/259 (20%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M KTL + Q+ + SAI P I +KLK I H R ED+HEFL +L+E + ++YL
Sbjct: 276 MAKTLQSTQSNA-SAIRPYHIYSKLKQICKHMVIGRQEDAHEFLRFLVEAMEKAYLMRYR 334
Query: 57 ---------KVISGSNNL-------------------------ELSLDIYQLSSLDEALG 82
K + N + +L LDI + +LDEA
Sbjct: 335 NYKELDQLVKETTPLNQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKSDTLDEAFD 394
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
+F++E L D Y+CE C K ATKQFS+++ PI + LKRF+ + K++ +
Sbjct: 395 GYFSRERL-EDMGYKCEGCKKKVSATKQFSLQRAPITLCIQLKRFSMIGNKLTKQISFKP 453
Query: 143 YLEFGKF----------MHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQ 192
++ +F + LVS V H G S GHY IG T SGSY+ F D V+
Sbjct: 454 RIDLSRFAARSPTAQGQLPLTYRLVSLVTHLGVSQHCGHYTAIGLTESGSYYNFDDSYVR 513
Query: 193 ASNLQQV--TNAYVVIYEL 209
+Q V TN+Y++ YEL
Sbjct: 514 PIAMQSVCSTNSYIMFYEL 532
>gi|405973690|gb|EKC38387.1| Ubiquitin carboxyl-terminal hydrolase 36 [Crassostrea gigas]
Length = 1002
Score = 120 bits (301), Expect = 5e-25, Method: Composition-based stats.
Identities = 82/253 (32%), Positives = 124/253 (49%), Gaps = 46/253 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
+++ + C SGS I P+ I+ KLK+IA H + R ED+HEFL Y+++ + +S L
Sbjct: 147 LQRHIKRCYENSGSNIKPQAILQKLKMIAKHMHWGRQEDAHEFLRYVVDSMQKSILNGHA 206
Query: 57 -------------KVISG--------------SNN----LELSLDIYQLSSLDEALGQFF 85
++ G SN L++SLDI + SL++A ++
Sbjct: 207 KLDKFSKETTVVNQIFGGYLRSQVQCLRCKEKSNTYDPFLDISLDIKTVPSLEKAFEKYV 266
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL---KISCAVQVPL 142
E L DN Y C +C K A K+FS+ KPP V + LKRF+Y + KI V P
Sbjct: 267 LPEKLDCDNAYMCNRCKQKVPALKRFSVHKPPNVLTVSLKRFDYSKMVQGKIGRHVHFPE 326
Query: 143 YLEFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNL 196
L +M R +L + ++H G ++ SGHY C SSGS++ D VQ ++
Sbjct: 327 KLNLRPYMSNRGGEPILFHLNAVLVHSGYTANSGHYYCYVKASSGSWYCMNDSNVQQVSV 386
Query: 197 QQV--TNAYVVIY 207
+V AYV+ Y
Sbjct: 387 NRVLGAEAYVLFY 399
>gi|195014496|ref|XP_001984029.1| GH16215 [Drosophila grimshawi]
gi|251765096|sp|B4IXE0.1|UBP36_DROGR RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|193897511|gb|EDV96377.1| GH16215 [Drosophila grimshawi]
Length = 1240
Score = 120 bits (301), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 124/258 (48%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M KTL + Q+ SA+ P LI +KL+ I H R ED+HEFL +LIE + ++YL
Sbjct: 256 MAKTLQSTQSNQ-SAVRPFLIYSKLRQICKHMVVGRQEDAHEFLRFLIEAMEKAYLMRFR 314
Query: 57 ---------KVISGSNNL-------------------------ELSLDIYQLSSLDEALG 82
K + N + +L LDI + +L++A
Sbjct: 315 NYKELDQLVKETTPLNQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKSDTLEDAFD 374
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
+F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 375 GYFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMMGNKLTKQISFKP 433
Query: 143 YLEFGKFMHCRRN---------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ +F LVS V H G S GHY IG T +GSY+ F D V+
Sbjct: 434 RIDLSRFAARSPTAAAQPLSYRLVSMVTHLGVSQHCGHYTAIGLTETGSYYNFDDSCVRP 493
Query: 194 SNLQQV--TNAYVVIYEL 209
+Q V TNAY++ YEL
Sbjct: 494 IAMQSVCNTNAYIMFYEL 511
>gi|195174068|ref|XP_002027804.1| GL16307 [Drosophila persimilis]
gi|194115480|gb|EDW37523.1| GL16307 [Drosophila persimilis]
Length = 530
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 90/269 (33%), Positives = 127/269 (47%), Gaps = 51/269 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M KTL + Q+ SA+ P I +KLK I H R ED+HEFL +L+E + ++YL
Sbjct: 224 MAKTLQSTQS-CQSAMRPFHIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMEKAYLMRFR 282
Query: 57 ---------KVISGSNNL-------------------------ELSLDIYQLSSLDEALG 82
K + N + +L LDI + +L+EA
Sbjct: 283 NFKELDQLVKETTPLNQIFGGYLRSEVRCLSCSHVSITFQHFQDLLLDIRKSDTLEEAFD 342
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
+F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 343 GYFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGNKLTKTISFKP 401
Query: 143 YLEFGKFMHCRR---------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ +F LVS V H G S GHY IG T SGSY+ F D V+
Sbjct: 402 RIDLSRFAARSPAAAAQPLTYRLVSMVTHLGVSQHCGHYTAIGMTESGSYYNFDDSYVRP 461
Query: 194 SNLQQV--TNAYVVIYELLPSSLHHLNSS 220
+Q V TNAY++ YEL S L S+
Sbjct: 462 IAMQSVCNTNAYIMFYELDLSQTTPLKSN 490
>gi|198466021|ref|XP_001353862.2| GA18934 [Drosophila pseudoobscura pseudoobscura]
gi|251765181|sp|Q2LZB1.2|UBP36_DROPS RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|198150413|gb|EAL29597.2| GA18934 [Drosophila pseudoobscura pseudoobscura]
Length = 1059
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 123/258 (47%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M KTL + Q+ SA+ P I +KLK I H R ED+HEFL +L+E + ++YL
Sbjct: 223 MAKTLQSTQS-CQSAMRPFHIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMEKAYLMRFR 281
Query: 57 ---------KVISGSNNL-------------------------ELSLDIYQLSSLDEALG 82
K + N + +L LDI + +L+EA
Sbjct: 282 NFKELDQLVKETTPLNQIFGGYLRSEVRCLSCSHVSITFQHFQDLLLDIRKSDTLEEAFD 341
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
+F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 342 GYFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGNKLTKTISFKP 400
Query: 143 YLEFGKFMHCRR---------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ +F LVS V H G S GHY IG T SGSY+ F D V+
Sbjct: 401 RIDLSRFAARSPAAAAQPLTYRLVSMVTHLGVSQHCGHYTAIGMTESGSYYNFDDSYVRP 460
Query: 194 SNLQQV--TNAYVVIYEL 209
+Q V TNAY++ YEL
Sbjct: 461 IAMQSVCNTNAYIMFYEL 478
>gi|196000410|ref|XP_002110073.1| hypothetical protein TRIADDRAFT_53651 [Trichoplax adhaerens]
gi|190588197|gb|EDV28239.1| hypothetical protein TRIADDRAFT_53651 [Trichoplax adhaerens]
Length = 870
Score = 117 bits (293), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 78/250 (31%), Positives = 115/250 (46%), Gaps = 47/250 (18%)
Query: 5 LAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL-------- 56
+ C +GS++ P I+NKLK IA H ++ R ED+HEFL YL++GI S L
Sbjct: 157 MVRCLKSNGSSVKPWPIVNKLKNIASHIQFGRQEDAHEFLRYLVDGIQSSCLAAYPKNLD 216
Query: 57 ----------------------------KVISGSNNLELSLDIYQLSSLDEALGQFFAKE 88
K I L+LSLDI L++L L +F E
Sbjct: 217 QYSKDTTMIYRIFGGYLRSLVQCAQCKYKSIKYDPMLDLSLDIADLNTLSAMLRKFIEPE 276
Query: 89 YLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL---KISCAVQVPLYLE 145
L ++Y C KC K +A K+F+I + P+V + +KRFN L K S ++ L+
Sbjct: 277 ILSGRDMYTCSKCKVKVKAMKKFTIHRAPVVLTIPIKRFNKFSLFGGKNSRKIKFTETLD 336
Query: 146 FGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV 199
+M + NL ++H G S SGHY C +S+ ++ D V SN+ V
Sbjct: 337 LRPYMTSKTGSPLLYNLYGVLVHSGGSCNSGHYYCYVKSSNNQWYCMNDSHVTKSNINAV 396
Query: 200 --TNAYVVIY 207
AY++ Y
Sbjct: 397 LLQEAYILFY 406
>gi|328699875|ref|XP_001952323.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like
[Acyrthosiphon pisum]
Length = 765
Score = 116 bits (291), Expect = 6e-24, Method: Composition-based stats.
Identities = 86/259 (33%), Positives = 122/259 (47%), Gaps = 60/259 (23%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL--------------- 56
+GS+ +I N+L LI H YR ED+HEFL YLIE + + YL
Sbjct: 145 TGSSFKASIITNRLSLICKHLSTYRQEDAHEFLRYLIESMEQCYLSAFGPAAKSLDNYSK 204
Query: 57 ------KVISGSNNLE------------------LSLDIYQLSSLDEALGQFFAKEYLVR 92
++ G E L LDI ++++AL +F KE L
Sbjct: 205 ETTPINQIFGGYMRTEVMCGKCGHISTTFQHFQDLILDIRHSDNVNDALDNYFKKEPL-- 262
Query: 93 DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFN-----YLCLKISCAVQVPLYLEFG 147
D Y CE C + A K+FSIE+ P V + LKR++ Y K S A+Q+ L+
Sbjct: 263 DESYLCEICQRQVAADKKFSIERAPNVLCIQLKRYSIGMDGYSGNKNSKAIQINERLDLS 322
Query: 148 --KFMH---------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNL 196
+F H R +LVS +IH+GSS GHY +G T SGSY+ F D V +N
Sbjct: 323 SYQFDHHTFKIDVRPLRYHLVSMIIHYGSSLHCGHYTTLGLTPSGSYYCFNDSNVYRTNF 382
Query: 197 QQVT---NAYVVIYELLPS 212
+ + ++Y++ YEL PS
Sbjct: 383 KNYSTSNDSYIIFYELEPS 401
>gi|427793029|gb|JAA61966.1| Putative ubiquitin carboxyl-terminal hydrolase, partial
[Rhipicephalus pulchellus]
Length = 1076
Score = 114 bits (286), Expect = 3e-23, Method: Composition-based stats.
Identities = 84/251 (33%), Positives = 120/251 (47%), Gaps = 49/251 (19%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE--------------------- 49
+SG +I P I +LK IA HF++ + ED+HEFL Y+I+
Sbjct: 227 KSGDSIKPVYIYQRLKAIAKHFQFGQQEDAHEFLRYVIDNLWKAALANYDGGVKLDPASK 286
Query: 50 ----------GIHRSY---LKVISGSNN----LELSLDIYQLSSLDEALGQFFAKEYLVR 92
G HRS +K SN ++L LDI SSL+ AL +F E L
Sbjct: 287 ETTVVNEIFGGYHRSQVTCMKCKEKSNTYDHFMDLILDIKNASSLETALEKFVEPELLQN 346
Query: 93 DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL---KISCAVQVPLYLEFGKF 149
DN Y+C +C K A K+F++ + P V LKRF+ + KI+ V P +LE +
Sbjct: 347 DNAYKCPRCNIKVMAQKRFTVHRAPNVATFQLKRFDANRMFGGKITKHVSYPEHLELRPY 406
Query: 150 MHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN-- 201
M + L + ++H G+S SGHY C S+GS++ D RV ++ QV N
Sbjct: 407 MSDKHGDPVTYRLNAVLVHLGASCNSGHYFCYVRNSNGSWYCMDDSRVHQVSMGQVLNQQ 466
Query: 202 AYVVIYELLPS 212
AYV+ Y PS
Sbjct: 467 AYVLFYVRTPS 477
>gi|167526008|ref|XP_001747338.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163774173|gb|EDQ87805.1| predicted protein [Monosiga brevicollis MX1]
Length = 1125
Score = 114 bits (284), Expect = 4e-23, Method: Composition-based stats.
Identities = 77/252 (30%), Positives = 122/252 (48%), Gaps = 51/252 (20%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK--------- 57
A + +G +I P+ I++KL+ I F R ED+HEF+ +LIE + +S +
Sbjct: 257 ALSSSAGPSITPQAIVSKLRTIYKRFRLGRQEDAHEFMRFLIEALQKSAVSTVGQLDERS 316
Query: 58 ----VISG------------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLV 91
VI G SN L+LSL+I + +LD+AL FF+ E L+
Sbjct: 317 KTTSVIHGIFGGYLRSQVRCLSCKYESNTYDPFLDLSLEIGKCQTLDKALRHFFSPEKLL 376
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL---KISCAVQVPLYLEFGK 148
R+N Y+C+ C +A KQFS P V + LKRF+++ + K+ VQ P L+
Sbjct: 377 RENQYRCDGCRKYVDALKQFSCHHLPNVLTVQLKRFSFISMFGSKVGQFVQYPEILDMAP 436
Query: 149 FMH-----------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQ 197
+++ R L + ++H G S SGHY C S+ ++ D RV ++ Q
Sbjct: 437 YVNKTQQASMTDRGTRYRLYAVLVHAGHSLQSGHYYCYVRNSNNIWYRMDDARVSTASQQ 496
Query: 198 QVT--NAYVVIY 207
+V AY++ Y
Sbjct: 497 EVMRQQAYILFY 508
>gi|302815104|ref|XP_002989234.1| hypothetical protein SELMODRAFT_1651 [Selaginella moellendorffii]
gi|300142977|gb|EFJ09672.1| hypothetical protein SELMODRAFT_1651 [Selaginella moellendorffii]
Length = 309
Score = 112 bits (280), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 112/244 (45%), Gaps = 49/244 (20%)
Query: 13 GSAIIPELIINKLKL----IAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------ 56
G I P +I+++ I+ F+ +R ED+HEFL YL+E + + L
Sbjct: 62 GKVIAPNHMISRVNYSNAGISRAFQPWRQEDAHEFLRYLMEALQKDCLPSKTPMNSPEQE 121
Query: 57 -----KVISG--------SNNLE----------LSLDIYQLSSLDEALGQFFAKEYLVRD 93
K+ G SN LE LSLDI + SL +AL F A E L D
Sbjct: 122 KTLLYKIFGGRLRSQVKCSNCLERSETVDPFLDLSLDITRADSLGKALAWFTANEILDGD 181
Query: 94 NLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL---KISCAVQVPLYLEFGKFM 150
N Y CEKC K A K+F+IE P V + KRF+ L KI V L+ FM
Sbjct: 182 NKYHCEKCKKKVRAIKRFTIETAPNVLTVQFKRFSSTGLHGQKIDKKVHFGRKLDITPFM 241
Query: 151 HCRR-----NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AY 203
R +L ++H G S+ SGHY C TSS +H D RVQ + Q V N AY
Sbjct: 242 SNARDGAVYDLYGVLVHAGWSTRSGHYYCFVRTSSDMWHVLDDSRVQQLSEQTVLNQKAY 301
Query: 204 VVIY 207
++ Y
Sbjct: 302 ILFY 305
>gi|302765142|ref|XP_002965992.1| hypothetical protein SELMODRAFT_1903 [Selaginella moellendorffii]
gi|300166806|gb|EFJ33412.1| hypothetical protein SELMODRAFT_1903 [Selaginella moellendorffii]
Length = 309
Score = 112 bits (279), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 85/244 (34%), Positives = 112/244 (45%), Gaps = 49/244 (20%)
Query: 13 GSAIIPELIINKLKL----IAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------ 56
G I P +I+++ I+ F+ +R ED+HEFL YL+E + + L
Sbjct: 62 GKVIAPNHMISRVNYSNAGISRAFQPWRQEDAHEFLRYLMEALQKDCLPSKTPMNSPEQE 121
Query: 57 -----KVISG--------SNNLE----------LSLDIYQLSSLDEALGQFFAKEYLVRD 93
K+ G SN LE LSLDI + SL +AL F A E L D
Sbjct: 122 KTLLYKIFGGRLRSQVKCSNCLERSETVDPFLDLSLDITRADSLGKALAWFTANEILDGD 181
Query: 94 NLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL---KISCAVQVPLYLEFGKFM 150
N Y CEKC K A K+F+IE P V + KRF+ L KI V L+ FM
Sbjct: 182 NKYHCEKCKKKVRAIKRFTIETAPNVLTVQFKRFSSTGLHGQKIDKKVHFGRKLDITPFM 241
Query: 151 HCRR-----NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AY 203
R +L ++H G S+ SGHY C TSS +H D RVQ + Q V N AY
Sbjct: 242 SNARDGAVYDLYGVLVHAGWSTRSGHYYCFVRTSSDMWHVLDDSRVQQLSEQTVLNQKAY 301
Query: 204 VVIY 207
++ Y
Sbjct: 302 ILFY 305
>gi|432921873|ref|XP_004080264.1| PREDICTED: uncharacterized protein LOC101169567 [Oryzias latipes]
Length = 1080
Score = 111 bits (278), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 77/241 (31%), Positives = 117/241 (48%), Gaps = 43/241 (17%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------- 56
A SG+ I P ++N+LK IA HF Y ED+HEFL Y ++ + +S L
Sbjct: 170 ANSGNVIKPIGVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATT 229
Query: 57 -------------------KVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNL 95
K +S + + L+++L+I S+ +AL QF E L +N
Sbjct: 230 FIHQVFGGYLRSRVKCLSCKAVSDTFDPFLDITLEIKMAPSVSKALEQFVKPEQLDGENA 289
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRR 154
Y+C KC A+K+F+I + P V L LKRF N+ KI+ V+ P L+ FM +
Sbjct: 290 YKCTKCKKMVTASKRFTIHRSPNVLTLSLKRFANFTGGKITKDVKYPESLDLRPFMSQSQ 349
Query: 155 N------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVI 206
L + ++H G S +GHY C S+G ++ D V S+++ V N AYV+
Sbjct: 350 GEPQNYGLYAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRSVLNQQAYVLF 409
Query: 207 Y 207
Y
Sbjct: 410 Y 410
>gi|311266703|ref|XP_003131212.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Sus scrofa]
Length = 1140
Score = 111 bits (277), Expect = 3e-22, Method: Composition-based stats.
Identities = 84/274 (30%), Positives = 125/274 (45%), Gaps = 47/274 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I L+ IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 166 MQNHIVQAFANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGCA 225
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 226 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFV 285
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 286 KPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKEVGYPEFL 345
Query: 145 EFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C SSG ++ D V ASN++
Sbjct: 346 NIRPYMSQSNGEPVLYGLYAVLVHSGYSCHAGHYYCYVKASSGQWYQMNDSLVHASNIKV 405
Query: 199 VTN--AYVVIYELLPSSLHHLNSSLH---SSSPG 227
V N AYV+ Y +P S S+ SS PG
Sbjct: 406 VLNQQAYVLFYLRIPGSKKSPQGSISRTASSLPG 439
>gi|410896095|ref|XP_003961535.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Takifugu
rubripes]
Length = 1162
Score = 110 bits (275), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 83/269 (30%), Positives = 126/269 (46%), Gaps = 46/269 (17%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------- 56
A SG+ I P ++N+LK IA HF Y ED+HEFL Y ++ + +S L
Sbjct: 140 ANSGNVIKPIGVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATT 199
Query: 57 -------------------KVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNL 95
K +S + + L++ L+I S+ +AL QF E L +N
Sbjct: 200 FIHQVFGGYLRSRVKCLNCKAVSDTFDPFLDIPLEIKTAPSVSKALEQFVKPEQLDGENA 259
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRR 154
Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P YL+ FM +
Sbjct: 260 YKCTKCKKMVTASKRFTIHRSANVLTLALKRFANFSGGKITKDVKYPEYLDLRPFMSQSQ 319
Query: 155 ------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVI 206
L + ++H G S +GHY C S+G ++ D V S+++ V N AYV+
Sbjct: 320 GEPQVYGLYAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSISDIRSVLNQQAYVLF 379
Query: 207 Y---ELLPSSLHHLNSSLHSSSPGSVEPR 232
Y + + + N S + PG PR
Sbjct: 380 YIKSSDMKKTGDYSNMSHNPGIPGQSSPR 408
>gi|301766030|ref|XP_002918424.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like
[Ailuropoda melanoleuca]
Length = 1116
Score = 110 bits (275), Expect = 6e-22, Method: Composition-based stats.
Identities = 84/274 (30%), Positives = 126/274 (45%), Gaps = 47/274 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KPDVLSGENAYMCAKCKKKVPASKRFTIHRASNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQSNGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKV 409
Query: 199 VTN--AYVVIYELLPSSLHHLNSSLH---SSSPG 227
V N AYV+ Y +P S + SL SS PG
Sbjct: 410 VLNQQAYVLFYLRIPGSKKSPDGSLSRTVSSLPG 443
>gi|281342803|gb|EFB18387.1| hypothetical protein PANDA_006891 [Ailuropoda melanoleuca]
Length = 1117
Score = 110 bits (274), Expect = 6e-22, Method: Composition-based stats.
Identities = 84/274 (30%), Positives = 126/274 (45%), Gaps = 47/274 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KPDVLSGENAYMCAKCKKKVPASKRFTIHRASNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQSNGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKV 409
Query: 199 VTN--AYVVIYELLPSSLHHLNSSLH---SSSPG 227
V N AYV+ Y +P S + SL SS PG
Sbjct: 410 VLNQQAYVLFYLRIPGSKKSPDGSLSRTVSSLPG 443
>gi|345804557|ref|XP_540463.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Canis lupus
familiaris]
Length = 1116
Score = 110 bits (274), Expect = 6e-22, Method: Composition-based stats.
Identities = 84/274 (30%), Positives = 127/274 (46%), Gaps = 47/274 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQSNGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKV 409
Query: 199 VTN--AYVVIYELLPSSLHHLNSSLH---SSSPG 227
V N AY++ Y +PSS + SL SS PG
Sbjct: 410 VLNQQAYLLFYLRIPSSKRSPDGSLSRTVSSIPG 443
>gi|443717815|gb|ELU08703.1| hypothetical protein CAPTEDRAFT_136598 [Capitella teleta]
Length = 442
Score = 110 bits (274), Expect = 6e-22, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 118/252 (46%), Gaps = 43/252 (17%)
Query: 8 CQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL----------- 56
C G AI P I+ K+KLIA H + R ED+HEFL Y+I+ + +S L
Sbjct: 181 CYENGGQAIKPHAILQKIKLIAKHMHWGRQEDAHEFLRYVIDAMQKSCLNGNTKLDRISK 240
Query: 57 --------------------KVISGSNN----LELSLDIYQLSSLDEALGQFFAKEYLVR 92
K + SN L++S+D+ + ++ +A +F E L
Sbjct: 241 ETTVINQIFGGFLRSQVVCLKCKAKSNTYDPFLDISVDVKNVPNIQKAFEKFVQPEQLDL 300
Query: 93 DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMHC 152
DN Y C KC K A K+F+I KP V + LKR+ + K++ + P L +M
Sbjct: 301 DNAYNCTKCKQKVAAQKRFTIHKPSNVLTIQLKRYGVMGGKVTRHISFPEKLNIRPYMSV 360
Query: 153 RR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYV 204
+ L + ++H G S+ SGHY C +S+ +++ D VQ ++ +V N AY+
Sbjct: 361 SQGAAITYQLYAVLVHMGHSTNSGHYYCYVRSSNQAWYCMNDSMVQQTSQGRVLNSEAYM 420
Query: 205 VIYELLPSSLHH 216
+ Y ++ +H
Sbjct: 421 LFYIRCDAAANH 432
>gi|440892473|gb|ELR45652.1| Ubiquitin carboxyl-terminal hydrolase 36 [Bos grunniens mutus]
Length = 1098
Score = 109 bits (273), Expect = 8e-22, Method: Composition-based stats.
Identities = 84/278 (30%), Positives = 126/278 (45%), Gaps = 49/278 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I L+ IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 168 MQNHIIQAFANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGCA 227
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 228 KLDRQTQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQAANIVRALELFV 287
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 288 KPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 347
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V ASN++
Sbjct: 348 NIRPYMSQSSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHASNIKV 407
Query: 199 VTN--AYVVIYELLPSSLHHLNSSLH-----SSSPGSV 229
V N AYV+ Y +P S S+ SS PG V
Sbjct: 408 VLNQQAYVLFYLRIPGSKKSPEGSISRTASLSSRPGVV 445
>gi|297487366|ref|XP_002696201.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Bos taurus]
gi|296476002|tpg|DAA18117.1| TPA: deubiquitinating enzyme 1-like [Bos taurus]
Length = 1101
Score = 109 bits (273), Expect = 8e-22, Method: Composition-based stats.
Identities = 84/278 (30%), Positives = 126/278 (45%), Gaps = 49/278 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I L+ IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIIQAFANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V ASN++
Sbjct: 350 NIRPYMSQSSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHASNIKV 409
Query: 199 VTN--AYVVIYELLPSSLHHLNSSLH-----SSSPGSV 229
V N AYV+ Y +P S S+ SS PG V
Sbjct: 410 VLNQQAYVLFYLRIPGSKKSPEGSISRTASLSSRPGVV 447
>gi|168015744|ref|XP_001760410.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162688424|gb|EDQ74801.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 312
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 76/251 (30%), Positives = 116/251 (46%), Gaps = 56/251 (22%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH----------------- 52
A SG A+ P ++ L+ I+ F +R ED+HE+L LIEG+H
Sbjct: 57 ASSGGAVSPSTLVKNLRCISKSFRMWRQEDAHEYLRCLIEGLHNCCLPPGVKSNSAVSQE 116
Query: 53 ------------RSYLKV---ISGSNN----LELSLDIYQLSSLDEALGQFFAKEYLVRD 93
RS +K ++ SN L+LSL+I + SL +AL +F A E L D
Sbjct: 117 RSLIHKIFGGRLRSQVKCTVCLTCSNTYDPLLDLSLEIVRADSLTKALNRFTAVEALEGD 176
Query: 94 NLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFM--- 150
N Y C C K A KQF+I+KPP + + KRF+ S ++ +EFG+ +
Sbjct: 177 NKYHCSHCNKKVRALKQFTIDKPPNILTIQFKRFSS---TGSSGGKIDKKIEFGRTLDLK 233
Query: 151 ------------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+ +L + ++H G S+ SGHY C T +H D RV+ + +
Sbjct: 234 PYISNPQVCSATDAKYSLYAVLVHAGWSTHSGHYYCFVRTKGDMWHALDDSRVKQVSEKS 293
Query: 199 VTN--AYVVIY 207
V + AY++ Y
Sbjct: 294 VLDQKAYILFY 304
>gi|426239211|ref|XP_004013519.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Ovis aries]
Length = 1080
Score = 108 bits (271), Expect = 1e-21, Method: Composition-based stats.
Identities = 88/288 (30%), Positives = 132/288 (45%), Gaps = 53/288 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I L+ IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIIQAFANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KPDVLSGENAYMCAKCKRKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V ASN++
Sbjct: 350 NIRPYMSQSSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSSVHASNIKV 409
Query: 199 VTN--AYVVIYELLP-------SSLHHLNSSLHSSSPGSVEPRTHHRN 237
V N AYV+ Y +P S+ + SSL SS P SV P +N
Sbjct: 410 VLNQQAYVLFYLRIPGSKKSPEGSISRMASSL-SSRP-SVVPDHVRKN 455
>gi|358055232|dbj|GAA99001.1| hypothetical protein E5Q_05690 [Mixia osmundae IAM 14324]
Length = 601
Score = 108 bits (271), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 85/275 (30%), Positives = 120/275 (43%), Gaps = 48/275 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + C +S S + P + LK IA HF R EDSHE L ++I+G+ + L
Sbjct: 228 MQDLINRCFGQSRSPLTPRGFTDNLKRIAKHFRLGRQEDSHELLRFVIDGMQQHELAGVP 287
Query: 57 --------------KVISGS------------------NNLELSLDIYQLSSLDEALGQF 84
++ G + L+LSLDI L L +AL +F
Sbjct: 288 PDALKARRDTTMIHRIFGGKLRSRVLCNKCGHASDTFESFLDLSLDIQGLDHLRDALRRF 347
Query: 85 FAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYL 144
F + L N Y+CE C EATKQ++I+ PP V L LKRF L KI ++ L
Sbjct: 348 FQPDDLRGQNKYKCEACTRMVEATKQYTIQSPPQVLTLHLKRFTPLGKKIGRSIGFDEDL 407
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNL-- 196
G+ R L V H G SGHY S GS++ D V S
Sbjct: 408 NLGRHTSEDHGKGLRYRLYGIVHHAGGGPQSGHYIAHVRDSVGSWNRMDDSHVSPSERMP 467
Query: 197 QQVTNAYVVIYELLPSSLHHLNSSLHSSSPGSVEP 231
+Q + AYV+ Y S L+++++ +SP S P
Sbjct: 468 RQSSTAYVLFYARDVS----LSAAINGASPSSGTP 498
>gi|291415162|ref|XP_002723823.1| PREDICTED: ubiquitin specific peptidase 36 [Oryctolagus cuniculus]
Length = 1054
Score = 108 bits (269), Expect = 3e-21, Method: Composition-based stats.
Identities = 86/286 (30%), Positives = 130/286 (45%), Gaps = 48/286 (16%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I L+ IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIIQAFANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSLCKSVSDTYDPYLDIALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+FSI + V L LKRF N+ KI+ V P +L
Sbjct: 290 KPDVLSGENAYLCAKCKKKVPASKRFSIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQSSGEPVTYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 409
Query: 199 VTN--AYVVIYELLPSSLHHLNS--SLHSSSPG--SVEPRTHHRNY 238
V N AYV+ Y +P S S +S PG SV P +N+
Sbjct: 410 VLNQQAYVLFYLRIPGSKKSPQGPISRAASFPGRPSVTPDPSRKNF 455
>gi|351698096|gb|EHB01015.1| Ubiquitin carboxyl-terminal hydrolase 36 [Heterocephalus glaber]
Length = 1107
Score = 107 bits (268), Expect = 3e-21, Method: Composition-based stats.
Identities = 79/257 (30%), Positives = 120/257 (46%), Gaps = 44/257 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 172 MQNHIVQAFANSGNAIKPISFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGYA 231
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 232 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFV 291
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 292 KPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 351
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 352 NIRPYMSQSNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 411
Query: 199 VTN--AYVVIYELLPSS 213
V N AYV+ Y +PSS
Sbjct: 412 VLNQQAYVLFYLRIPSS 428
>gi|345319072|ref|XP_001520693.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36
[Ornithorhynchus anatinus]
Length = 989
Score = 107 bits (268), Expect = 4e-21, Method: Composition-based stats.
Identities = 78/255 (30%), Positives = 117/255 (45%), Gaps = 44/255 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 172 MQNHMIQTFANSGNAIKPFSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGHA 231
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 232 KLDRQTQATTLVHQIFGGYLRSRVKCSLCKSVSDTYDPYLDVALEIRQTANIVRALELFV 291
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-LKISCAVQVPLYL 144
+ L +N Y C KC K A+K+FSI + V L LKRF C KI+ V P +L
Sbjct: 292 KPDVLSGENAYMCAKCKKKVPASKRFSIHRASNVLTLSLKRFANFCGGKITKDVGYPEFL 351
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 352 NIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSSVHSSNIKV 411
Query: 199 VTN--AYVVIYELLP 211
V N AYV+ Y +P
Sbjct: 412 VLNQQAYVLFYLRIP 426
>gi|327285944|ref|XP_003227691.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Anolis
carolinensis]
Length = 1283
Score = 107 bits (267), Expect = 4e-21, Method: Compositional matrix adjust.
Identities = 79/271 (29%), Positives = 127/271 (46%), Gaps = 52/271 (19%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLE--- 66
+ SG+ I P +IN L+ IA HF + ED+HEFL Y ++ + ++ L +GSN L+
Sbjct: 168 SNSGNVIKPMPVINDLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACL---NGSNKLDRHT 224
Query: 67 -----------------------------------LSLDIYQLSSLDEALGQFFAKEYLV 91
++L+I S+++AL QF E L
Sbjct: 225 QATTFIHQIFGGYLRSRVKCMNCKGVSDTFDPYLDITLEIKSAQSINKALEQFVKPEQLD 284
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFM 150
+N Y+C KC A+K+F++ + V L LKRF N+ KI+ V+ P YL+ +M
Sbjct: 285 GENAYKCSKCKKMVPASKRFTVHRASNVLTLSLKRFANFSGGKITKEVKYPEYLDIRPYM 344
Query: 151 HCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--A 202
L + ++H G S +GHY C S+G ++ D V S+++ V N A
Sbjct: 345 SQPNGEPIIYALYAVLVHTGFSCHAGHYYCYIKASNGQWYQMNDSTVSNSDIRTVLNQQA 404
Query: 203 YVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
YV+ Y + + + +HS+ +PG PR
Sbjct: 405 YVLFY-IRSHDMKNGGEHIHSAHTPGQSSPR 434
>gi|148702707|gb|EDL34654.1| mCG13907, isoform CRA_a [Mus musculus]
Length = 1008
Score = 107 bits (267), Expect = 4e-21, Method: Composition-based stats.
Identities = 78/257 (30%), Positives = 119/257 (46%), Gaps = 44/257 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KSDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 409
Query: 199 VTN--AYVVIYELLPSS 213
V N AYV+ Y +P S
Sbjct: 410 VLNQQAYVLFYLRIPGS 426
>gi|432869264|ref|XP_004071701.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Oryzias
latipes]
Length = 1055
Score = 107 bits (267), Expect = 5e-21, Method: Composition-based stats.
Identities = 75/248 (30%), Positives = 117/248 (47%), Gaps = 44/248 (17%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------- 56
A +G+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 179 ANTGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDRQTQAT 238
Query: 57 --------------------KVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDN 94
K +S + + L+++++I Q +++ AL F + L +N
Sbjct: 239 TLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIAVEIRQTANIVRALELFVKPDVLSGEN 298
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMH-- 151
Y C KC K ATK+F++ + V L LKRF N+ KI+ V P +L +M
Sbjct: 299 AYMCAKCKKKVPATKRFTVHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQS 358
Query: 152 ----CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVV 205
L + ++H G S +GHY C S+G ++ D VQ+SN++ V N AYV+
Sbjct: 359 SGDPVMYGLYAVLVHSGYSCHAGHYYCYIKASNGQWYQMNDSMVQSSNIKVVLNQQAYVL 418
Query: 206 IYELLPSS 213
Y +P +
Sbjct: 419 FYLRIPET 426
>gi|148702709|gb|EDL34656.1| mCG13907, isoform CRA_c [Mus musculus]
Length = 1092
Score = 107 bits (266), Expect = 6e-21, Method: Composition-based stats.
Identities = 78/257 (30%), Positives = 119/257 (46%), Gaps = 44/257 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 207 MQNHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYA 266
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 267 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANIVRALELFV 326
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 327 KSDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 386
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 387 NIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 446
Query: 199 VTN--AYVVIYELLPSS 213
V N AYV+ Y +P S
Sbjct: 447 VLNQQAYVLFYLRIPGS 463
>gi|397494913|ref|XP_003818312.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Pan paniscus]
Length = 1122
Score = 106 bits (265), Expect = 7e-21, Method: Composition-based stats.
Identities = 86/287 (29%), Positives = 131/287 (45%), Gaps = 50/287 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 409
Query: 199 VTN--AYVVIYELLPSSLHH----LNSSLHSSSPG--SVEPRTHHRN 237
V N AYV+ Y +P S ++ + SS PG SV P +N
Sbjct: 410 VLNQQAYVLFYLRIPGSKKSPEGLISRTGSSSLPGRPSVIPDHSKKN 456
>gi|426346503|ref|XP_004040916.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Gorilla
gorilla gorilla]
Length = 1123
Score = 106 bits (265), Expect = 7e-21, Method: Composition-based stats.
Identities = 86/287 (29%), Positives = 131/287 (45%), Gaps = 50/287 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 409
Query: 199 VTN--AYVVIYELLPSSLHH----LNSSLHSSSPG--SVEPRTHHRN 237
V N AYV+ Y +P S ++ + SS PG SV P +N
Sbjct: 410 VLNQQAYVLFYLRIPGSKKSPEGLISRTGSSSLPGRPSVIPDHSKKN 456
>gi|410222778|gb|JAA08608.1| ubiquitin specific peptidase 36 [Pan troglodytes]
gi|410266542|gb|JAA21237.1| ubiquitin specific peptidase 36 [Pan troglodytes]
gi|410297248|gb|JAA27224.1| ubiquitin specific peptidase 36 [Pan troglodytes]
gi|410340693|gb|JAA39293.1| ubiquitin specific peptidase 36 [Pan troglodytes]
Length = 1123
Score = 106 bits (265), Expect = 7e-21, Method: Composition-based stats.
Identities = 86/287 (29%), Positives = 131/287 (45%), Gaps = 50/287 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 409
Query: 199 VTN--AYVVIYELLPSSLHH----LNSSLHSSSPG--SVEPRTHHRN 237
V N AYV+ Y +P S ++ + SS PG SV P +N
Sbjct: 410 VLNQQAYVLFYLRIPGSKKSPEGLISRTGSSSLPGRPSVIPDHSKKN 456
>gi|124056592|sp|Q9P275.3|UBP36_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Ubiquitin
thioesterase 36; AltName:
Full=Ubiquitin-specific-processing protease 36
Length = 1121
Score = 106 bits (265), Expect = 7e-21, Method: Composition-based stats.
Identities = 86/287 (29%), Positives = 131/287 (45%), Gaps = 50/287 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 409
Query: 199 VTN--AYVVIYELLPSSLHH----LNSSLHSSSPG--SVEPRTHHRN 237
V N AYV+ Y +P S ++ + SS PG SV P +N
Sbjct: 410 VLNQQAYVLFYLRIPGSKKSPEGLISRTGSSSLPGRPSVIPDHSKKN 456
>gi|7959165|dbj|BAA95977.1| KIAA1453 protein [Homo sapiens]
Length = 1123
Score = 106 bits (265), Expect = 7e-21, Method: Composition-based stats.
Identities = 86/287 (29%), Positives = 131/287 (45%), Gaps = 50/287 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 172 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 231
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 232 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFV 291
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 292 KADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 351
Query: 145 EFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 352 NIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 411
Query: 199 VTN--AYVVIYELLPSSLHH----LNSSLHSSSPG--SVEPRTHHRN 237
V N AYV+ Y +P S ++ + SS PG SV P +N
Sbjct: 412 VLNQQAYVLFYLRIPGSKKSPEGLISRTGSSSLPGRPSVIPDHSKKN 458
>gi|431908709|gb|ELK12301.1| Ubiquitin carboxyl-terminal hydrolase 36 [Pteropus alecto]
Length = 1007
Score = 106 bits (265), Expect = 7e-21, Method: Composition-based stats.
Identities = 77/257 (29%), Positives = 119/257 (46%), Gaps = 44/257 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLSGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
+ +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCRSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQSSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVNSSNIKV 409
Query: 199 VTN--AYVVIYELLPSS 213
V N AYV+ Y +P S
Sbjct: 410 VLNQQAYVLFYLRIPGS 426
>gi|226442882|ref|NP_001028700.1| ubiquitin carboxyl-terminal hydrolase 36 [Mus musculus]
gi|251765139|sp|B1AQJ2.1|UBP36_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Ubiquitin
thioesterase 36; AltName:
Full=Ubiquitin-specific-processing protease 36
Length = 1098
Score = 106 bits (265), Expect = 8e-21, Method: Composition-based stats.
Identities = 78/257 (30%), Positives = 119/257 (46%), Gaps = 44/257 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KSDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 409
Query: 199 VTN--AYVVIYELLPSS 213
V N AYV+ Y +P S
Sbjct: 410 VLNQQAYVLFYLRIPGS 426
>gi|149723495|ref|XP_001491180.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Equus
caballus]
Length = 1122
Score = 106 bits (265), Expect = 8e-21, Method: Composition-based stats.
Identities = 85/280 (30%), Positives = 128/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KPDVLSGENAYMCAKCKKKVPASKRFTIHRTSSVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQSSGEPVVYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKV 409
Query: 199 VTN--AYVVIYELLP-------SSLHHLNSSLHSSSPGSV 229
V N AYV+ Y +P S+ SSL S PG+V
Sbjct: 410 VLNQQAYVLFYLRIPGFKKSPEGSISRTVSSL-PSRPGAV 448
>gi|148702708|gb|EDL34655.1| mCG13907, isoform CRA_b [Mus musculus]
Length = 1037
Score = 106 bits (265), Expect = 8e-21, Method: Composition-based stats.
Identities = 78/257 (30%), Positives = 119/257 (46%), Gaps = 44/257 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 152 MQNHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYA 211
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 212 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANIVRALELFV 271
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 272 KSDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 331
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 332 NIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 391
Query: 199 VTN--AYVVIYELLPSS 213
V N AYV+ Y +P S
Sbjct: 392 VLNQQAYVLFYLRIPGS 408
>gi|168270556|dbj|BAG10071.1| ubiquitin carboxyl-terminal hydrolase 36 [synthetic construct]
Length = 1121
Score = 106 bits (265), Expect = 8e-21, Method: Composition-based stats.
Identities = 86/287 (29%), Positives = 131/287 (45%), Gaps = 50/287 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 409
Query: 199 VTN--AYVVIYELLPSSLHH----LNSSLHSSSPG--SVEPRTHHRN 237
V N AYV+ Y +P S ++ + SS PG SV P +N
Sbjct: 410 VLNQQAYVLFYLRIPGSKKSPEGLISRTGSSSLPGRPSVIPDHSKKN 456
>gi|47940448|gb|AAH71582.1| USP36 protein [Homo sapiens]
Length = 1123
Score = 106 bits (265), Expect = 8e-21, Method: Composition-based stats.
Identities = 86/287 (29%), Positives = 131/287 (45%), Gaps = 50/287 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 409
Query: 199 VTN--AYVVIYELLPSSLHH----LNSSLHSSSPG--SVEPRTHHRN 237
V N AYV+ Y +P S ++ + SS PG SV P +N
Sbjct: 410 VLNQQAYVLFYLRIPGSKKSPEGLISRTGSSSLPGRPSVIPDHSKKN 456
>gi|122114651|ref|NP_079366.3| ubiquitin carboxyl-terminal hydrolase 36 [Homo sapiens]
gi|119609940|gb|EAW89534.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
gi|119609941|gb|EAW89535.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
gi|119609942|gb|EAW89536.1| ubiquitin specific peptidase 36, isoform CRA_b [Homo sapiens]
Length = 1123
Score = 106 bits (264), Expect = 9e-21, Method: Composition-based stats.
Identities = 86/287 (29%), Positives = 131/287 (45%), Gaps = 50/287 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 409
Query: 199 VTN--AYVVIYELLPSSLHH----LNSSLHSSSPG--SVEPRTHHRN 237
V N AYV+ Y +P S ++ + SS PG SV P +N
Sbjct: 410 VLNQQAYVLFYLRIPGSKKSPEGLISRTGSSSLPGRPSVIPDHSKKN 456
>gi|47226066|emb|CAG04440.1| unnamed protein product [Tetraodon nigroviridis]
Length = 535
Score = 106 bits (264), Expect = 9e-21, Method: Compositional matrix adjust.
Identities = 82/270 (30%), Positives = 124/270 (45%), Gaps = 48/270 (17%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------- 56
A +G+ I P ++N+LK IA HF Y ED+HEFL Y ++ + +S L
Sbjct: 86 ANTGNVIKPIGVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATT 145
Query: 57 -------------------KVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNL 95
K +S + + L++ L+I S+ +AL QF E L +N
Sbjct: 146 FIHQVFGGYLRSRVKCLNCKAVSDTFDPFLDIPLEIKTAPSVSKALEQFVKPEQLDGENA 205
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRR 154
Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P YL+ FM +
Sbjct: 206 YKCTKCKKMVTASKRFTIHRSANVLTLALKRFANFSGGKITKDVKYPEYLDLRPFMSQSQ 265
Query: 155 ------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVI 206
L + ++H G S +GHY C S+G ++ D V S+++ V AYV+
Sbjct: 266 GEPQVYGLYAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSISDIRSVLSQQAYVLF 325
Query: 207 YELLPSSLHHLNSSLHSSS----PGSVEPR 232
Y + S + H S PG PR
Sbjct: 326 Y-IKSSDMKKTGDYSHMSHNPGIPGQSSPR 354
>gi|326930828|ref|XP_003211542.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Meleagris
gallopavo]
Length = 874
Score = 106 bits (264), Expect = 9e-21, Method: Composition-based stats.
Identities = 79/270 (29%), Positives = 121/270 (44%), Gaps = 44/270 (16%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 25 MQNHMIQAFANSGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLSGCT 84
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L++SL+I Q +++ AL F
Sbjct: 85 RLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVSLEIRQAANIVRALELFV 144
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C +C K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 145 KSDVLSGENAYMCARCKKKVPASKRFTIHRASNVLTLSLKRFANFSGGKITKDVGYPEFL 204
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V SN++
Sbjct: 205 NIRPYMSQNTGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHCSNIKV 264
Query: 199 VTN--AYVVIYELLPSSLHHLNSSLHSSSP 226
V N AYV+ Y +P + +SP
Sbjct: 265 VLNQQAYVLFYLRIPGPRKGSEGPIAKASP 294
>gi|363740969|ref|XP_424101.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36, partial
[Gallus gallus]
Length = 884
Score = 106 bits (264), Expect = 9e-21, Method: Composition-based stats.
Identities = 78/255 (30%), Positives = 117/255 (45%), Gaps = 44/255 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 36 MQNHMIQAFANSGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLSGCT 95
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L++SL+I Q +++ AL F
Sbjct: 96 RLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVSLEIRQAANIVRALELFV 155
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L DN Y C +C K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 156 KSDVLSGDNAYMCARCKKKVPASKRFTIHRASNVLTLSLKRFANFSGGKITKDVGYPEFL 215
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V SN++
Sbjct: 216 NIRPYMSQNSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHCSNIKV 275
Query: 199 VTN--AYVVIYELLP 211
V N AYV+ Y +P
Sbjct: 276 VLNQQAYVLFYLRIP 290
>gi|297701928|ref|XP_002827948.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Pongo abelii]
Length = 1124
Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats.
Identities = 86/287 (29%), Positives = 131/287 (45%), Gaps = 50/287 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 171 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 230
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 231 KLDRQTQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQAANIVRALELFV 290
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 291 KADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 350
Query: 145 EFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 351 NIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 410
Query: 199 VTN--AYVVIYELLPSSLHH----LNSSLHSSSPG--SVEPRTHHRN 237
V N AYV+ Y +P S ++ + SS PG SV P +N
Sbjct: 411 VLNQQAYVLFYLRIPGSKKSPEGLISRTGSSSLPGRPSVIPDHSKKN 457
>gi|344291363|ref|XP_003417405.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Loxodonta
africana]
Length = 1132
Score = 106 bits (264), Expect = 1e-20, Method: Composition-based stats.
Identities = 79/257 (30%), Positives = 118/257 (45%), Gaps = 44/257 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIIQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANIVRALEVFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+FSI + V L LKRF N+ KI+ V P +L
Sbjct: 290 KPDVLSGENAYMCAKCKKKVPASKRFSIHRASSVLTLSLKRFANFTGGKITKDVGYPEFL 349
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V SN++
Sbjct: 350 NIRPYMSQSNGEPVMYGLYAVLVHSGYSCHAGHYYCYVKVSNGQWYQMNDSLVHLSNIKV 409
Query: 199 VTN--AYVVIYELLPSS 213
V N AYV+ Y +P S
Sbjct: 410 VLNQQAYVLFYLRIPGS 426
>gi|119609939|gb|EAW89533.1| ubiquitin specific peptidase 36, isoform CRA_a [Homo sapiens]
Length = 1075
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 86/287 (29%), Positives = 131/287 (45%), Gaps = 50/287 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 409
Query: 199 VTN--AYVVIYELLPSSLHH----LNSSLHSSSPG--SVEPRTHHRN 237
V N AYV+ Y +P S ++ + SS PG SV P +N
Sbjct: 410 VLNQQAYVLFYLRIPGSKKSPEGLISRTGSSSLPGRPSVIPDHSKKN 456
>gi|410052277|ref|XP_001146571.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Pan
troglodytes]
Length = 1037
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 86/287 (29%), Positives = 131/287 (45%), Gaps = 50/287 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 409
Query: 199 VTN--AYVVIYELLPSSLHH----LNSSLHSSSPG--SVEPRTHHRN 237
V N AYV+ Y +P S ++ + SS PG SV P +N
Sbjct: 410 VLNQQAYVLFYLRIPGSKKSPEGLISRTGSSSLPGRPSVIPDHSKKN 456
>gi|390463858|ref|XP_003733115.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Callithrix jacchus]
Length = 1124
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 80/276 (28%), Positives = 124/276 (44%), Gaps = 44/276 (15%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 169 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 228
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 229 KLDRQTQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDIALEIRQAANIVRALELFV 288
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 289 KADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 348
Query: 145 EFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 349 NMRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 408
Query: 199 VTN--AYVVIYELLPSSLHHLNSSLHSSSPGSVEPR 232
V N AYV+ Y +P S + + S+ R
Sbjct: 409 VLNQQAYVLFYLRIPGSKKSPEGPISKTGSSSLPSR 444
>gi|37360390|dbj|BAC98173.1| mKIAA1453 protein [Mus musculus]
Length = 974
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 78/257 (30%), Positives = 119/257 (46%), Gaps = 44/257 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 207 MQNHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYA 266
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 267 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANIVRALELFV 326
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 327 KSDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 386
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 387 NIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 446
Query: 199 VTN--AYVVIYELLPSS 213
V N AYV+ Y +P S
Sbjct: 447 VLNQQAYVLFYLRIPGS 463
>gi|432118123|gb|ELK38013.1| Ubiquitin carboxyl-terminal hydrolase 36 [Myotis davidii]
Length = 889
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 77/257 (29%), Positives = 119/257 (46%), Gaps = 44/257 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ L A SG+AI P I L+ IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 118 MQNHLVQAFANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIDAMQKACLSGYA 177
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 178 KLDRQTQATTLVHQIFGGCLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFV 237
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C +C K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 238 KPDALSGENAYMCARCKKKVPASKRFTIHRASNVLTLSLKRFANFSGGKITKDVGYPEFL 297
Query: 145 EFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 298 NIRPYMSQSSGEPVVYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKV 357
Query: 199 VTN--AYVVIYELLPSS 213
V N AYV+ Y +P S
Sbjct: 358 VLNQQAYVLFYLRIPGS 374
>gi|354473286|ref|XP_003498867.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Cricetulus
griseus]
gi|344241778|gb|EGV97881.1| Ubiquitin carboxyl-terminal hydrolase 36 [Cricetulus griseus]
Length = 1104
Score = 105 bits (263), Expect = 1e-20, Method: Composition-based stats.
Identities = 78/257 (30%), Positives = 119/257 (46%), Gaps = 44/257 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 409
Query: 199 VTN--AYVVIYELLPSS 213
V N AYV+ Y +P S
Sbjct: 410 VLNQQAYVLFYLRIPGS 426
>gi|348525234|ref|XP_003450127.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Oreochromis
niloticus]
Length = 1149
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 75/257 (29%), Positives = 119/257 (46%), Gaps = 44/257 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A +G+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIIQAFANTGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYP 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++++I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIAVEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K ATK+F++ + V L LKRF N+ KI+ V P +L
Sbjct: 290 KPDVLSGENAYMCAKCKKKVPATKRFTVHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSMVHSSNIKV 409
Query: 199 VTN--AYVVIYELLPSS 213
V N AYV+ Y +P +
Sbjct: 410 VLNQQAYVLFYLRIPET 426
>gi|116283676|gb|AAH27992.1| USP36 protein [Homo sapiens]
Length = 959
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 86/287 (29%), Positives = 131/287 (45%), Gaps = 50/287 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 409
Query: 199 VTN--AYVVIYELLPSSLHH----LNSSLHSSSPG--SVEPRTHHRN 237
V N AYV+ Y +P S ++ + SS PG SV P +N
Sbjct: 410 VLNQQAYVLFYLRIPGSKKSPEGLISRTGSSSLPGRPSVIPDHSKKN 456
>gi|380790487|gb|AFE67119.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
gi|383411117|gb|AFH28772.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
Length = 1123
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 78/257 (30%), Positives = 119/257 (46%), Gaps = 44/257 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 409
Query: 199 VTN--AYVVIYELLPSS 213
V N AYV+ Y +P S
Sbjct: 410 VLNQQAYVLFYLRIPGS 426
>gi|402901257|ref|XP_003913570.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Papio anubis]
Length = 1123
Score = 105 bits (262), Expect = 1e-20, Method: Composition-based stats.
Identities = 78/257 (30%), Positives = 119/257 (46%), Gaps = 44/257 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 409
Query: 199 VTN--AYVVIYELLPSS 213
V N AYV+ Y +P S
Sbjct: 410 VLNQQAYVLFYLRIPGS 426
>gi|384941532|gb|AFI34371.1| ubiquitin carboxyl-terminal hydrolase 36 [Macaca mulatta]
Length = 1123
Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats.
Identities = 78/257 (30%), Positives = 119/257 (46%), Gaps = 44/257 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 409
Query: 199 VTN--AYVVIYELLPSS 213
V N AYV+ Y +P S
Sbjct: 410 VLNQQAYVLFYLRIPGS 426
>gi|116284123|gb|AAH16487.1| USP36 protein [Homo sapiens]
Length = 963
Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats.
Identities = 86/287 (29%), Positives = 131/287 (45%), Gaps = 50/287 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 409
Query: 199 VTN--AYVVIYELLPSSLHH----LNSSLHSSSPG--SVEPRTHHRN 237
V N AYV+ Y +P S ++ + SS PG SV P +N
Sbjct: 410 VLNQQAYVLFYLRIPGSKKSPEGLISRTGSSSLPGRPSVIPDHSKKN 456
>gi|194676314|ref|XP_580726.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Bos taurus]
Length = 1106
Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats.
Identities = 86/283 (30%), Positives = 125/283 (44%), Gaps = 54/283 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLY-------------- 46
M+ + A SG+AI P I L+ IA HF + ED+HEFL Y
Sbjct: 170 MQNHIIQAFANSGNAIKPVSFIRDLRKIARHFRFGNQEDAHEFLRYTIXXXXXXXXXXXX 229
Query: 47 ---------------LIEGIHRSYL---------KVISGSNN--LELSLDIYQLSSLDEA 80
L+ I YL K +S + + L+++L+I Q +++ A
Sbjct: 230 XXXXXKLDRQTQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDVALEIRQAANIVRA 289
Query: 81 LGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQ 139
L F + L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V
Sbjct: 290 LELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVG 349
Query: 140 VPLYLEFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
P +L +M L + ++H G S +GHY C S+G ++ D V A
Sbjct: 350 YPEFLNIRPYMSQSSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHA 409
Query: 194 SNLQQVTN--AYVVIYELLPSSLHHLNSSLH-----SSSPGSV 229
SN++ V N AYV+ Y +P S S+ SS PG V
Sbjct: 410 SNIKVVLNQQAYVLFYLRIPGSKKSPEGSISRTASLSSRPGVV 452
>gi|328766417|gb|EGF76471.1| hypothetical protein BATDEDRAFT_28405 [Batrachochytrium
dendrobatidis JAM81]
Length = 525
Score = 105 bits (262), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 74/238 (31%), Positives = 111/238 (46%), Gaps = 39/238 (16%)
Query: 9 QAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHR--------------- 53
Q S I P L + L+ I+ H R ED+HEF +LIEG+
Sbjct: 147 QTSSEKPIQPRLFVENLRKISRHIRLGRQEDAHEFTRFLIEGLKNGEGDRTPEATLAHAI 206
Query: 54 ---------SYLKVISGSNNLE----LSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEK 100
+ LK S SN L+ +SLDI + +S+++AL +F E L + N Y+C K
Sbjct: 207 FSGKLQSQITCLKCKSTSNTLDPLMDISLDIQKCASVEDALARFTTSELLHKQNQYRCSK 266
Query: 101 CGYKTEATKQFSIEKPPIVFILLLKRFNY---LCLKISCAVQVPLYLEFGKFM--HCRRN 155
C +A KQ ++ +PP+V + LKRF + + KIS V L FM ++N
Sbjct: 267 CNALRDAYKQITVLEPPVVLTVQLKRFGFGHRVGSKISSPVLFKTVLNLYPFMSQSTKQN 326
Query: 156 ----LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S SGHY C G ++ D VQ + + V +AY++ Y
Sbjct: 327 VLYHLFAVLVHSGGSCHSGHYYCFVKAPDGCWYLMNDSLVQQVSEKTVLAQSAYMLFY 384
>gi|7023072|dbj|BAA91825.1| unnamed protein product [Homo sapiens]
Length = 954
Score = 105 bits (262), Expect = 2e-20, Method: Composition-based stats.
Identities = 86/287 (29%), Positives = 131/287 (45%), Gaps = 50/287 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 409
Query: 199 VTN--AYVVIYELLPSSLHH----LNSSLHSSSPG--SVEPRTHHRN 237
V N AYV+ Y +P S ++ + SS PG SV P +N
Sbjct: 410 VLNQQAYVLFYLRIPGSKKSPEGLISRTGSSSLPGRPSVIPDHSKKN 456
>gi|348558248|ref|XP_003464930.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Cavia
porcellus]
Length = 1102
Score = 105 bits (261), Expect = 2e-20, Method: Composition-based stats.
Identities = 79/257 (30%), Positives = 118/257 (45%), Gaps = 44/257 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIVQAFANSGNAIKPISFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQATNIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N KI+ V P +L
Sbjct: 290 KPDVLSGENAYMCAKCRKKVPASKRFTIHRTSNVLTLSLKRFANLSGGKITKDVGYPEFL 349
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V ASN++
Sbjct: 350 NIRPYMSQSNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHASNVKV 409
Query: 199 VTN--AYVVIYELLPSS 213
V N AYV+ Y +P S
Sbjct: 410 VLNQQAYVLFYLRIPGS 426
>gi|157820619|ref|NP_001100539.1| ubiquitin carboxyl-terminal hydrolase 36 [Rattus norvegicus]
gi|149054934|gb|EDM06751.1| ubiquitin specific protease 36 (predicted) [Rattus norvegicus]
Length = 1005
Score = 104 bits (260), Expect = 2e-20, Method: Composition-based stats.
Identities = 77/257 (29%), Positives = 119/257 (46%), Gaps = 44/257 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
+ +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCRSVSDTYDPYLDIALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+FSI + V L LKRF N+ KI+ V P +L
Sbjct: 290 KSDVLSGENAYMCAKCKKKVPASKRFSIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 409
Query: 199 VTN--AYVVIYELLPSS 213
V + AYV+ Y +P S
Sbjct: 410 VLSQQAYVLFYLRIPGS 426
>gi|395533332|ref|XP_003768714.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Sarcophilus
harrisii]
Length = 1142
Score = 104 bits (260), Expect = 3e-20, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 117/248 (47%), Gaps = 44/248 (17%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------- 56
A SG+AI P I LK IA HF + ED+HEFL Y+I+ + ++ L
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYIIDAMQKACLNGYTKLDRQTQAT 238
Query: 57 --------------------KVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDN 94
K +S + + L+++L+I Q +++ AL F + L +N
Sbjct: 239 TLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKPDVLSGEN 298
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCR 153
Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L +M
Sbjct: 299 AYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQS 358
Query: 154 R------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVV 205
L + ++H G S +GHY C S+G ++ D V +SN++ V N AYV+
Sbjct: 359 NGDPIMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVL 418
Query: 206 IYELLPSS 213
Y +P S
Sbjct: 419 FYLRIPGS 426
>gi|47219080|emb|CAG00219.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1113
Score = 104 bits (259), Expect = 4e-20, Method: Composition-based stats.
Identities = 77/275 (28%), Positives = 126/275 (45%), Gaps = 46/275 (16%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A +G+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 171 MQNHIIQAFANTGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLSGYP 230
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++++I Q +++ AL F
Sbjct: 231 KLDRQTQATTLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIAVEIRQAANIVRALELFV 290
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K ATK+F++ + V + LKRF N+ KI+ V P +L
Sbjct: 291 KPDVLSGENAYMCAKCKKKVPATKRFTVHRTSNVLTVSLKRFANFSGGKITKDVGYPEFL 350
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 351 NIRPYMSQSSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKV 410
Query: 199 VTN--AYVVIYELLPSSLHHLNSSLHSSSPGSVEP 231
V N AYV+ Y +P + N+ ++ G + P
Sbjct: 411 VLNQQAYVLFYLRIPET--KKNADGQATKQGVLHP 443
>gi|334323020|ref|XP_001371102.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Monodelphis
domestica]
Length = 1133
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 117/248 (47%), Gaps = 44/248 (17%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------- 56
A SG+AI P I LK IA HF + ED+HEFL Y+I+ + ++ L
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYIIDAMQKACLNGYTKLDRQTQAT 238
Query: 57 --------------------KVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDN 94
K +S + + L+++L+I Q +++ AL F + L +N
Sbjct: 239 TLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKPDVLSGEN 298
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCR 153
Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L +M
Sbjct: 299 AYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQS 358
Query: 154 R------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVV 205
L + ++H G S +GHY C S+G ++ D V +SN++ V N AYV+
Sbjct: 359 NGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVL 418
Query: 206 IYELLPSS 213
Y +P S
Sbjct: 419 FYLRIPGS 426
>gi|410902504|ref|XP_003964734.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Takifugu
rubripes]
Length = 1050
Score = 103 bits (258), Expect = 4e-20, Method: Composition-based stats.
Identities = 74/257 (28%), Positives = 119/257 (46%), Gaps = 44/257 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A +G+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIIQAFANTGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLSGYP 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++++I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIAVEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K ATK+F++ + V + LKRF N+ KI+ V P +L
Sbjct: 290 KPDVLSGENAYMCAKCKKKVPATKRFTVHRTSNVLTVSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKV 409
Query: 199 VTN--AYVVIYELLPSS 213
V N AYV+ Y +P +
Sbjct: 410 VLNQQAYVLFYLRIPET 426
>gi|19075305|ref|NP_587805.1| ubiquitin C-terminal hydrolase Ubp16 [Schizosaccharomyces pombe
972h-]
gi|74626856|sp|O74442.1|UBP16_SCHPO RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 16;
AltName: Full=Deubiquitinating enzyme 16; AltName:
Full=Ubiquitin thioesterase 16; AltName:
Full=Ubiquitin-specific-processing protease 16
gi|3560166|emb|CAA20678.1| ubiquitin C-terminal hydrolase Ubp16 [Schizosaccharomyces pombe]
Length = 457
Score = 103 bits (258), Expect = 4e-20, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 120/257 (46%), Gaps = 48/257 (18%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------- 56
+ SA P I + LK+I+ HF YR ED+HEF+ YL++ +S L
Sbjct: 185 TKRASAFKPSGIQSMLKVISSHFRPYRQEDAHEFMRYLVDAWQKSCLQNHKNLDHPSRET 244
Query: 57 ----KVISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVRDN 94
++ G SN L+LS+D + SSL ++L F E L + N
Sbjct: 245 SVVHRIFGGYLRQQILCSVCKKPSNTYQALLDLSVDA-KGSSLADSLKHFVHAEKLTKQN 303
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL---KISCAVQVPLYLEFGKFM- 150
Y+CE C +A+KQ +I + P + + KRF + KIS + P G +M
Sbjct: 304 KYRCENCKQLVDASKQMTIYRAPNILTIHFKRFTFNGFQSSKISKQISYPESFNLGPYMS 363
Query: 151 ----HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYV 204
C L+ ++H G S+ SGHY +S+G + F DD V S++ +V N AY+
Sbjct: 364 DPNCSCWYELIGVLVHAGGSTRSGHYYSFCKSSNGVWLKFDDDFVSNSSIDRVLNQQAYI 423
Query: 205 VIYEL--LPSSLHHLNS 219
+ Y+ SS H LN+
Sbjct: 424 LQYKRKSTSSSKHKLNT 440
>gi|28502773|gb|AAH47168.1| Usp42 protein [Danio rerio]
Length = 1016
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 123/266 (46%), Gaps = 43/266 (16%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------- 56
A SG+ I P ++N+LK I HF + ED+HEFL Y ++ + +S L
Sbjct: 140 ANSGNVIKPISVLNELKRIGKHFRFGSQEDAHEFLRYTVDAMQKSCLPGNKLDRQTQATT 199
Query: 57 -------------------KVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNL 95
K +S + + L++SL+I +L +A QF E L DN
Sbjct: 200 FVHQIFGGYLRSRVKCLNCKAVSDTFDPYLDISLEIKTAQTLSKAFEQFVKPEQLDGDNA 259
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRR 154
Y+C KC A+K+F++ + V + LKRF N+ KI+ V+ +L+ FM
Sbjct: 260 YKCSKCKKMVTASKRFTVHRSSNVLTISLKRFTNFNGGKITKDVRYAEHLDLRPFMSQSH 319
Query: 155 N------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVI 206
L + ++H G S +GHY C S+G ++ D V S+++ V N AY++
Sbjct: 320 GEPQIYALYAVLVHSGFSCHAGHYYCYIKASNGQWYQMNDSSVSLSDIRTVLNQQAYLLF 379
Query: 207 YELLPSSLHHLNSSLHSSSPGSVEPR 232
Y P + + S + +PG PR
Sbjct: 380 YIRSPDVKNGGDFSQMNHTPGQSSPR 405
>gi|34785787|gb|AAH57482.1| Usp42 protein [Danio rerio]
Length = 985
Score = 103 bits (258), Expect = 5e-20, Method: Compositional matrix adjust.
Identities = 77/266 (28%), Positives = 123/266 (46%), Gaps = 43/266 (16%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------- 56
A SG+ I P ++N+LK I HF + ED+HEFL Y ++ + +S L
Sbjct: 140 ANSGNVIKPISVLNELKRIGKHFRFGSQEDAHEFLRYTVDAMQKSCLPGNKLDRQTQATT 199
Query: 57 -------------------KVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNL 95
K +S + + L++SL+I +L +A QF E L DN
Sbjct: 200 FVHQIFGGYLRSRVKCLNCKAVSDTFDPYLDISLEIKTAQTLSKAFEQFVKPEQLDGDNA 259
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRR 154
Y+C KC A+K+F++ + V + LKRF N+ KI+ V+ +L+ FM
Sbjct: 260 YKCSKCKKMVTASKRFTVHRSSNVLTISLKRFTNFNGGKITKDVRYAEHLDLRPFMSQSH 319
Query: 155 N------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVI 206
L + ++H G S +GHY C S+G ++ D V S+++ V N AY++
Sbjct: 320 GEPQIYALYAVLVHSGFSCHAGHYYCYIKASNGQWYQMNDSSVSLSDIRTVLNQQAYLLF 379
Query: 207 YELLPSSLHHLNSSLHSSSPGSVEPR 232
Y P + + S + +PG PR
Sbjct: 380 YIRSPDVKNGGDFSQMNHTPGQSSPR 405
>gi|441643579|ref|XP_003278478.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36 [Nomascus leucogenys]
Length = 1122
Score = 103 bits (256), Expect = 7e-20, Method: Composition-based stats.
Identities = 84/286 (29%), Positives = 128/286 (44%), Gaps = 49/286 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLE 145
+ L +N Y C KC K A+K+F+I + V L LKR KI+ V P +L
Sbjct: 290 KADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRCQLQRGKITKDVGYPEFLN 349
Query: 146 FGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV 199
+M L + ++H G S +GHY C S+G ++ D V +SN++ V
Sbjct: 350 IRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVV 409
Query: 200 TN--AYVVIYELLPSSLHH----LNSSLHSSSPG--SVEPRTHHRN 237
N AYV+ Y +P S ++ + SS PG SV P +N
Sbjct: 410 LNQQAYVLFYLRIPGSKKSPEGLISRTGSSSLPGRLSVIPDHSKKN 455
>gi|327264744|ref|XP_003217171.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Anolis
carolinensis]
Length = 1114
Score = 103 bits (256), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 78/260 (30%), Positives = 121/260 (46%), Gaps = 44/260 (16%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------- 56
A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 177 ANSGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYTKLDRQTQAT 236
Query: 57 --------------------KVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDN 94
K +S + + L+++L+I Q +++ AL F + L +N
Sbjct: 237 TLVHQIFGGYLRSRVKCSMCKSVSDTYDPFLDVALEIRQAANIVRALELFVKADVLSGEN 296
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCR 153
Y C KC K A+K+F+I + V + LKRF N+ KI+ V P +L +M
Sbjct: 297 AYMCAKCKKKVPASKRFTIHRASNVLTISLKRFANFSGGKITKDVGYPEFLNIRPYMSQS 356
Query: 154 R------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVV 205
L + ++H G S +GHY C S+G ++ D V +SN++ V N AYV+
Sbjct: 357 SGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNIKVVLNQQAYVL 416
Query: 206 IYELLPSSLHHLNSSLHSSS 225
Y +PS+ + + SS
Sbjct: 417 FYLRIPSTRKNPEGPISKSS 436
>gi|10434580|dbj|BAB14306.1| unnamed protein product [Homo sapiens]
gi|37727299|gb|AAO34133.1| deubiquitinating enzyme 1 [Homo sapiens]
Length = 548
Score = 103 bits (256), Expect = 8e-20, Method: Compositional matrix adjust.
Identities = 77/248 (31%), Positives = 116/248 (46%), Gaps = 44/248 (17%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------- 56
A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 179 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCAKLDRQTQAT 238
Query: 57 --------------------KVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDN 94
K +S + + L+++L+I Q +++ AL F + L +N
Sbjct: 239 TLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKADVLSGEN 298
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCR 153
Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L +M
Sbjct: 299 AYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQN 358
Query: 154 R------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVV 205
L + ++H G S +GHY C S+G ++ D V +SN++ V N AYV+
Sbjct: 359 NGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVL 418
Query: 206 IYELLPSS 213
Y +P S
Sbjct: 419 FYLRIPGS 426
>gi|410984363|ref|XP_003998498.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Felis catus]
Length = 1304
Score = 102 bits (255), Expect = 1e-19, Method: Composition-based stats.
Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + HS+ SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHSTHSPGQSSPR 434
>gi|37722101|gb|AAR01977.1| DUB1 [Mus musculus]
Length = 729
Score = 102 bits (254), Expect = 1e-19, Method: Composition-based stats.
Identities = 78/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 158 MQTHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 214
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+ +AL
Sbjct: 215 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALE 274
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V + LKRF N+ KI+ V+ P
Sbjct: 275 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYP 334
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 335 EYLDIRPYMSQPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 394
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V N AYV+ Y + + + S H + SPG PR
Sbjct: 395 IRAVLNQQAYVLFY-IRSHDVKNGGESAHPAHSPGQSSPR 433
>gi|449275065|gb|EMC84050.1| Ubiquitin carboxyl-terminal hydrolase 36, partial [Columba livia]
Length = 349
Score = 102 bits (254), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 74/242 (30%), Positives = 113/242 (46%), Gaps = 44/242 (18%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK------------ 57
A SG+AI P + LK IA H + R ED+HEFL + I+ + ++ L+
Sbjct: 106 ANSGNAIKPVSFVRNLKRIAPHIRFGRQEDAHEFLRFTIDAMQKACLRDHARSDRQTQAT 165
Query: 58 ------------------VISGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDN 94
V G ++ L+++L+I Q +++ AL F + L N
Sbjct: 166 TLIHQIFGGYLQSRVKCSVCRGVSDTFDPCLDVALEITQAANIVRALELFVRPDLLGGAN 225
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMH-- 151
Y C +C K ATK+F+I + P V L LKRF + KI+ V P L +M
Sbjct: 226 AYMCARCKKKVSATKRFTIHRAPNVLTLALKRFAGFTGGKITKDVGYPELLNIRPYMSQT 285
Query: 152 ----CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVV 205
L + ++H G SS +GHY C S+G ++ D+ V+ SN++ V N AYV+
Sbjct: 286 SGDPVMYGLYAVLVHSGYSSHAGHYYCYVKASNGQWYQMNDNVVRPSNVKVVLNQQAYVL 345
Query: 206 IY 207
Y
Sbjct: 346 FY 347
>gi|431918189|gb|ELK17417.1| Ubiquitin carboxyl-terminal hydrolase 42 [Pteropus alecto]
Length = 1361
Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats.
Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + HS+ SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHSAHSPGQSSPR 434
>gi|198414888|ref|XP_002127053.1| PREDICTED: similar to ubiquitin specific protease 36 [Ciona
intestinalis]
Length = 768
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 75/257 (29%), Positives = 117/257 (45%), Gaps = 47/257 (18%)
Query: 6 AACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL--------- 56
+A G +I P I+ L++IA H ++ R ED+HEF+ Y ++ + RS L
Sbjct: 161 SASFGNGGKSIRPMNILKNLRIIAKHLQFGRQEDAHEFIRYSVDAMQRSCLFGLPSKLDI 220
Query: 57 -------------------------KVISGSNN--LELSLDIYQLSSLD--EALGQFFAK 87
+ +S + + L+LSLDI + S D + L F
Sbjct: 221 HTKTTTLVYQIFGGYLRSRVKCRQCRAVSDTFDPFLDLSLDINKQESNDLRKCLENFVKP 280
Query: 88 EYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEF 146
E L DNLY+C +C A+K FSI +PP V + LKRF +++ KI+ + P L
Sbjct: 281 ELLHGDNLYKCYQCKKSVPASKTFSIHRPPNVLTVQLKRFSSFMGNKINRDITYPSKLNL 340
Query: 147 GKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVT 200
G + RN L + ++H G S SGHY ++G ++ F D V + Q
Sbjct: 341 GPYTSSDRNEGPIYDLYAVLVHSGFSCNSGHYYAYAKAANGQWYCFNDSSVNQVSSHQAL 400
Query: 201 N--AYVVIYELLPSSLH 215
N AY++ Y + + H
Sbjct: 401 NQQAYLLFYHRVAETKH 417
>gi|358421676|ref|XP_003585072.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Bos
taurus]
Length = 326
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 78/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 5 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 61
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 62 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 121
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 122 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 181
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 182 EYLDIRPYMSQPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 241
Query: 196 LQQV--TNAYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V AYV+ Y + + + HS+ SPG PR
Sbjct: 242 IRSVLSQQAYVLFY-IRSHDVKNGGELTHSAHSPGQSSPR 280
>gi|392568498|gb|EIW61672.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 664
Score = 102 bits (253), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 68/235 (28%), Positives = 109/235 (46%), Gaps = 43/235 (18%)
Query: 16 IIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN----------- 64
+ P I KL++IA R EDSHEFL YL++ + +S L + G +
Sbjct: 177 VTPYPITTKLQVIAKQMRRGRQEDSHEFLRYLVDALQKSSLAGLPGKVDPKVAEKTWVYK 236
Query: 65 -------------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCE 99
L+LS+DI +++L +AL +F A + L + Y+CE
Sbjct: 237 IFGGLLRSRVNCLSCDYNSDTYDRMLDLSVDIAGVATLKDALRKFVAVDRLRGADKYKCE 296
Query: 100 KCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMHCRR----- 154
KC A K+F+I++ P+V L LKRF+ + KI V P L +M +
Sbjct: 297 KCKKPVNADKRFTIDEAPVVLTLHLKRFSPMGRKIPHPVSYPERLTLQPYMSDGKFGPSY 356
Query: 155 NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV--QASNLQQVTNAYVVIY 207
+L + + H GS SGHY +G+++ D+ V Q+S + +AY++ Y
Sbjct: 357 SLYAVISHAGSGPNSGHYYAHVKGGNGTWYEMNDESVMRQSSAPTNMRSAYMLFY 411
>gi|440899908|gb|ELR51150.1| Ubiquitin carboxyl-terminal hydrolase 42, partial [Bos grunniens
mutus]
Length = 1304
Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats.
Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + HS+ SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHSAHSPGQSSPR 434
>gi|432100061|gb|ELK28954.1| Ubiquitin carboxyl-terminal hydrolase 42 [Myotis davidii]
Length = 1175
Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats.
Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + HS+ SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHSAHSPGQSSPR 434
>gi|426255424|ref|XP_004021348.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 42 [Ovis aries]
Length = 1264
Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats.
Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 158 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 214
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 215 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 274
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 275 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 334
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 335 EYLDIRPYMSQPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 394
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + HS+ SPG PR
Sbjct: 395 IRSVLSQQAYVLFY-IRSHDVKNGGELTHSAHSPGQSSPR 433
>gi|322967638|sp|E1B9W9.1|UBP42_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
Length = 1333
Score = 102 bits (253), Expect = 2e-19, Method: Composition-based stats.
Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + HS+ SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHSAHSPGQSSPR 434
>gi|331284138|ref|NP_001193568.1| ubiquitin carboxyl-terminal hydrolase 42 [Bos taurus]
gi|296473096|tpg|DAA15211.1| TPA: ubiquitin specific protease 42-like [Bos taurus]
Length = 1325
Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + HS+ SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHSAHSPGQSSPR 434
>gi|116686116|ref|NP_084025.2| ubiquitin carboxyl-terminal hydrolase 42 [Mus musculus]
gi|322967639|sp|B2RQC2.1|UBP42_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
gi|148687090|gb|EDL19037.1| ubiquitin specific peptidase 42 [Mus musculus]
gi|187953717|gb|AAI37853.1| Ubiquitin specific peptidase 42 [Mus musculus]
Length = 1324
Score = 101 bits (252), Expect = 2e-19, Method: Composition-based stats.
Identities = 78/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 158 MQTHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 214
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+ +AL
Sbjct: 215 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALE 274
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V + LKRF N+ KI+ V+ P
Sbjct: 275 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYP 334
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 335 EYLDIRPYMSQPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 394
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V N AYV+ Y + + + S H + SPG PR
Sbjct: 395 IRAVLNQQAYVLFY-IRSHDVKNGGESAHPAHSPGQSSPR 433
>gi|354467793|ref|XP_003496353.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like
[Cricetulus griseus]
Length = 1285
Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 126/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 158 MQTHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 214
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+ +AL
Sbjct: 215 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALE 274
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V + LKRF N+ KI+ V+ P
Sbjct: 275 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYP 334
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 335 EYLDIRPYMSQPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 394
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V N AYV+ Y + + + H + SPG PR
Sbjct: 395 IRSVLNQQAYVLFY-IRSHDVKNGGEPAHPTHSPGQSSPR 433
>gi|348502126|ref|XP_003438620.1| PREDICTED: hypothetical protein LOC100709216 [Oreochromis
niloticus]
Length = 1174
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 74/241 (30%), Positives = 116/241 (48%), Gaps = 43/241 (17%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------- 56
A SG+ I P ++N+LK IA HF Y ED+HEFL Y ++ + +S L
Sbjct: 141 ANSGNVIKPIGVLNELKRIAKHFRYGSQEDAHEFLRYTVDAMQKSCLPGTKLDRQTQATS 200
Query: 57 -------------------KVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNL 95
K +S + + L+++L+I ++ +AL QF E L +N
Sbjct: 201 FIHQVFGGYLRSRVKCLNCKAVSDTFDPFLDITLEIKTAPNVSKALEQFVKPEQLDGENA 260
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRR 154
Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ +L+ FM +
Sbjct: 261 YKCTKCKKMVTASKRFTIHRSANVLTLSLKRFANFSGGKITKDVKYLEHLDLRPFMSQSQ 320
Query: 155 N------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVI 206
L + ++H G S +GHY C S+G ++ D V S+++ V N AYV+
Sbjct: 321 GEPQLYGLYAVLVHSGFSCHAGHYFCYIKASNGQWYQMNDSSVSVSDIRTVLNQQAYVLF 380
Query: 207 Y 207
Y
Sbjct: 381 Y 381
>gi|321449079|gb|EFX61718.1| hypothetical protein DAPPUDRAFT_16988 [Daphnia pulex]
Length = 194
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 60/153 (39%), Positives = 84/153 (54%), Gaps = 10/153 (6%)
Query: 66 ELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLK 125
++ LDI S+LD+ALG +F +E L DN Y+CEKC K ATK+FSIE+ P V + LK
Sbjct: 41 DIPLDIQHASTLDDALGHYFRRERLEGDNAYKCEKCKSKVPATKKFSIERAPNVLCIQLK 100
Query: 126 RFNYLCLKISCAVQVPLYLEFGKFMHCRRN--------LVSAVIHHGSSSFSGHYNCIGS 177
RF + K+S +Q L +F+ + + VS + H G S GHY I
Sbjct: 101 RFGLMGGKMSKHIQFSRNLNLNRFLFHQSSGGPCVTYKFVSLINHMGPSQHCGHYTAIAE 160
Query: 178 TSSGSYHYFGDDRVQ--ASNLQQVTNAYVVIYE 208
S+G + F D V+ + N+ T AYV+IYE
Sbjct: 161 ASNGQLYLFDDCSVRLISLNVAMSTGAYVLIYE 193
>gi|51094456|gb|EAL23715.1| ubiquitin specific protease 42 [Homo sapiens]
Length = 1350
Score = 101 bits (251), Expect = 3e-19, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + H + SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHPTHSPGQSSPR 434
>gi|18424054|ref|NP_568873.1| ubiquitin carboxyl-terminal hydrolase 23 [Arabidopsis thaliana]
gi|166201350|sp|Q9FPS4.2|UBP23_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 23; AltName:
Full=Deubiquitinating enzyme 23; Short=AtUBP23; AltName:
Full=Ubiquitin thioesterase 23; AltName:
Full=Ubiquitin-specific-processing protease 23
gi|332009599|gb|AED96982.1| ubiquitin carboxyl-terminal hydrolase 23 [Arabidopsis thaliana]
Length = 859
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 124/255 (48%), Gaps = 50/255 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
++K + + +G + P+ +++ L+ I+ +F R ED+HE+++ L+E +H+ L
Sbjct: 155 IQKHVRTARQANGRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHKCSLPSGV 214
Query: 57 --------------KVISGS-------------NN-----LELSLDIYQLSSLDEALGQF 84
K+ GS +N L+LSLDI + SL AL +F
Sbjct: 215 PSESSDAYRRSLVHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDISKADSLQRALSRF 274
Query: 85 FAKEYLVRDN---LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQV 140
A E L DN +YQCE+C K +A KQ ++ K P V + LKRF + KI V
Sbjct: 275 TAVELL--DNGAKVYQCERCKQKVKAKKQLTVSKAPYVLTVHLKRFEAHRSEKIDRKVDF 332
Query: 141 PLYLEFGKFM------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQAS 194
++ F+ + + L ++H+G SS SGHY C TSSG ++ D+RV
Sbjct: 333 TSAIDMKPFVSGPHEGNLKYTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVVQV 392
Query: 195 NLQQVTN--AYVVIY 207
+ + V N AY++ Y
Sbjct: 393 SEKTVFNQKAYMLFY 407
>gi|11993486|gb|AAG42761.1|AF302671_1 ubiquitin-specific protease 23 [Arabidopsis thaliana]
Length = 859
Score = 101 bits (251), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 124/255 (48%), Gaps = 50/255 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
++K + + +G + P+ +++ L+ I+ +F R ED+HE+++ L+E +H+ L
Sbjct: 155 IQKHVRTARQANGRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHKCSLPSGV 214
Query: 57 --------------KVISGS-------------NN-----LELSLDIYQLSSLDEALGQF 84
K+ GS +N L+LSLDI + SL AL +F
Sbjct: 215 PSESSDAYRRSLVHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDISKADSLQRALSRF 274
Query: 85 FAKEYLVRDN---LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQV 140
A E L DN +YQCE+C K +A KQ ++ K P V + LKRF + KI V
Sbjct: 275 TAVELL--DNGAKVYQCERCKQKVKAKKQLTVSKAPYVLTVHLKRFEAHRSEKIDRKVDF 332
Query: 141 PLYLEFGKFM------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQAS 194
++ F+ + + L ++H+G SS SGHY C TSSG ++ D+RV
Sbjct: 333 TSAIDMKPFVSGPHEGNLKYTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVVQV 392
Query: 195 NLQQVTN--AYVVIY 207
+ + V N AY++ Y
Sbjct: 393 SEKTVFNQKAYMLFY 407
>gi|79750944|ref|NP_115548.1| ubiquitin carboxyl-terminal hydrolase 42 [Homo sapiens]
gi|124376914|gb|AAI32863.1| Ubiquitin specific peptidase 42 [Homo sapiens]
Length = 1316
Score = 100 bits (250), Expect = 4e-19, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + H + SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHPTHSPGQSSPR 434
>gi|334332968|ref|XP_001377522.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 42 [Monodelphis domestica]
Length = 1371
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 113/239 (47%), Gaps = 44/239 (18%)
Query: 13 GSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---------------- 56
G+ I P +IN L+ IA HF + ED+HEFL Y ++ + ++ L
Sbjct: 171 GNVIKPMPVINDLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACLNGSTKLDRHSQATTLV 230
Query: 57 -----------------KVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQ 97
K +S + + L++ L+I S+++AL QF E L +N Y+
Sbjct: 231 CQIFGGYLRSRVKCMNCKGVSDTFDPYLDIPLEIKAAQSVNKALEQFVKPEQLDGENSYK 290
Query: 98 CEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRRN- 155
C KC A+K+F+I + V L LKRF N+ KI+ V+ P YL+ +M
Sbjct: 291 CSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFSGGKIAKDVKYPEYLDIRPYMSQPNGE 350
Query: 156 -----LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
L + ++H G S +GHY C S+G ++ D V S+++ V N AYV+ Y
Sbjct: 351 PIIYVLYAVLVHTGFSCHAGHYYCYIKASNGQWYQMNDSIVSTSDIRSVLNQQAYVLFY 409
>gi|78057011|emb|CAE53097.1| ubiquitin-specific protease 42 [Homo sapiens]
Length = 1325
Score = 100 bits (250), Expect = 4e-19, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + H + SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHPTHSPGQSSPR 434
>gi|157786872|ref|NP_001099379.1| ubiquitin carboxyl-terminal hydrolase 42 [Rattus norvegicus]
gi|322967640|sp|D3ZU96.1|UBP42_RAT RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
gi|149034935|gb|EDL89655.1| ubiquitin specific protease 42 (predicted) [Rattus norvegicus]
Length = 1325
Score = 100 bits (250), Expect = 4e-19, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 158 MQTHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 214
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+ +AL
Sbjct: 215 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALE 274
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V + LKRF N+ KI+ V+ P
Sbjct: 275 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYP 334
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 335 EYLDIRPYMSQPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 394
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V N AYV+ Y + + + + H + SPG PR
Sbjct: 395 IRSVLNQQAYVLFY-IRSHDVKNGGETTHPAHSPGQSSPR 433
>gi|322510098|sp|Q9H9J4.3|UBP42_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 42; AltName:
Full=Deubiquitinating enzyme 42; AltName: Full=Ubiquitin
thioesterase 42; AltName:
Full=Ubiquitin-specific-processing protease 42
Length = 1324
Score = 100 bits (249), Expect = 5e-19, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + H + SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHPTHSPGQSSPR 434
>gi|49616863|gb|AAT67238.1| ubiquitin specific protease 42 [Homo sapiens]
Length = 1324
Score = 100 bits (249), Expect = 5e-19, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + H + SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHPTHSPGQSSPR 434
>gi|395514662|ref|XP_003761533.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Sarcophilus
harrisii]
Length = 1358
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 72/239 (30%), Positives = 113/239 (47%), Gaps = 44/239 (18%)
Query: 13 GSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---------------- 56
G+ I P +IN L+ IA HF + ED+HEFL Y ++ + ++ L
Sbjct: 171 GNVIKPMPVINDLRRIAKHFRFGNQEDAHEFLRYTVDAMQKACLNGSTKLDRHSQATTLV 230
Query: 57 -----------------KVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQ 97
K +S + + L++ L+I S+++AL QF E L +N Y+
Sbjct: 231 CQIFGGYLRSRVKCMNCKGVSDTFDPYLDIPLEIKAAQSVNKALEQFVKPEQLDGENSYK 290
Query: 98 CEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRRN- 155
C KC A+K+F+I + V L LKRF N+ KI+ V+ P YL+ +M
Sbjct: 291 CSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFSGGKIAKDVKYPEYLDIRPYMSQPNGE 350
Query: 156 -----LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
L + ++H G S +GHY C S+G ++ D V S+++ V N AYV+ Y
Sbjct: 351 PIIYVLYAVLVHTGFSCHAGHYYCYIKASNGQWYQMNDSIVSTSDIRSVLNQQAYVLFY 409
>gi|395852854|ref|XP_003798945.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Otolemur
garnettii]
Length = 1330
Score = 100 bits (249), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 77/280 (27%), Positives = 128/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I ++++AL
Sbjct: 216 GSNKLDRHTQATTFVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQTVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENAYKCSKCKKMVTASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQV--TNAYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V AYV+ Y + + + + HS+ SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGSELAHSTHSPGQSSPR 434
>gi|390353834|ref|XP_001179436.2| PREDICTED: uncharacterized protein LOC754104 [Strongylocentrotus
purpuratus]
Length = 1340
Score = 100 bits (249), Expect = 5e-19, Method: Composition-based stats.
Identities = 78/243 (32%), Positives = 107/243 (44%), Gaps = 53/243 (21%)
Query: 15 AIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN---------- 64
AI P +I+KLK IA H R ED+HEFL Y+IE + +S L SG +N
Sbjct: 196 AIRPMNMIHKLKSIAKHMHIGRQEDAHEFLRYVIEAMQKSCL---SGYDNKLDRYSKETS 252
Query: 65 -----------------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNL 95
L++SLDI S+ +AL + E L DN
Sbjct: 253 PVHQIFGGYYRSRVICAACQSKSDTFDPFLDISLDIKHAPSVHKALNRLIQSEMLDGDNA 312
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL---KISCAVQVPLYLEFGKFMHC 152
YQC++C K A K+F+I + P + L LKRF + KI+ V YL FM
Sbjct: 313 YQCKRCNRKVLAQKRFTIHRCPNILTLCLKRFEFNRFSMGKINKEVSYSEYLNLRPFMSE 372
Query: 153 RR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYV 204
+ L + + H G S SGHY C + S++ D V +L +V NAYV
Sbjct: 373 TKGPAVGYQLYAVLKHEGGSCNSGHYYCYVRAPNQSWYCMNDSYVSQCSLNRVLNQNAYV 432
Query: 205 VIY 207
+ Y
Sbjct: 433 LFY 435
>gi|71052117|gb|AAH60846.2| USP42 protein, partial [Homo sapiens]
Length = 1202
Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + H + SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHPTHSPGQSSPR 434
>gi|194218707|ref|XP_001493909.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Equus
caballus]
Length = 1393
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 123/268 (45%), Gaps = 52/268 (19%)
Query: 13 GSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLE------ 66
G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +GSN L+
Sbjct: 171 GDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---NGSNKLDRHTQAT 227
Query: 67 --------------------------------LSLDIYQLSSLDEALGQFFAKEYLVRDN 94
++L+I S+++AL QF E L +N
Sbjct: 228 TLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGEN 287
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCR 153
Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P YL+ +M
Sbjct: 288 SYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQP 347
Query: 154 RN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
L + ++H G + +GHY C S+G ++ D V S+++ V AYV+
Sbjct: 348 NGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVL 407
Query: 206 IYELLPSSLHHLNSSLHSS-SPGSVEPR 232
Y + + + HS+ SPG PR
Sbjct: 408 FY-IRSHDVKNGGELTHSTHSPGQSSPR 434
>gi|297679837|ref|XP_002817723.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Pongo abelii]
Length = 1176
Score = 100 bits (249), Expect = 6e-19, Method: Composition-based stats.
Identities = 76/279 (27%), Positives = 126/279 (45%), Gaps = 50/279 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 18 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 74
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 75 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 134
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 135 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 194
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 195 EYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 254
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSSSPGSVEPR 232
++ V + AYV+ Y + + + + SPG PR
Sbjct: 255 IRSVLSQQAYVLFYIRSHDVKNGGDLTHPTHSPGQSSPR 293
>gi|73958002|ref|XP_536882.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 isoform 1
[Canis lupus familiaris]
Length = 1331
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 123/268 (45%), Gaps = 52/268 (19%)
Query: 13 GSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLE------ 66
G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +GSN L+
Sbjct: 171 GDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---NGSNKLDRHTQAT 227
Query: 67 --------------------------------LSLDIYQLSSLDEALGQFFAKEYLVRDN 94
++L+I S+++AL QF E L +N
Sbjct: 228 TLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGEN 287
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCR 153
Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P YL+ +M
Sbjct: 288 SYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQP 347
Query: 154 RN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
L + ++H G + +GHY C S+G ++ D V S+++ V AYV+
Sbjct: 348 NGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVL 407
Query: 206 IYELLPSSLHHLNSSLHSS-SPGSVEPR 232
Y + + + HS+ SPG PR
Sbjct: 408 FY-IRSHDVKNGGELTHSTHSPGQSSPR 434
>gi|301762222|ref|XP_002916532.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like
[Ailuropoda melanoleuca]
Length = 1186
Score = 100 bits (249), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 123/268 (45%), Gaps = 52/268 (19%)
Query: 13 GSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLE------ 66
G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +GSN L+
Sbjct: 29 GDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---NGSNKLDRHTQAT 85
Query: 67 --------------------------------LSLDIYQLSSLDEALGQFFAKEYLVRDN 94
++L+I S+++AL QF E L +N
Sbjct: 86 TLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGEN 145
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCR 153
Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P YL+ +M
Sbjct: 146 SYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQP 205
Query: 154 RN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
L + ++H G + +GHY C S+G ++ D V S+++ V AYV+
Sbjct: 206 NGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVL 265
Query: 206 IYELLPSSLHHLNSSLHSS-SPGSVEPR 232
Y + + + HS+ SPG PR
Sbjct: 266 FY-IRSHDVKNGGEITHSTHSPGQSSPR 292
>gi|34784440|gb|AAH57470.1| Usp36 protein [Danio rerio]
Length = 758
Score = 100 bits (248), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 114/246 (46%), Gaps = 44/246 (17%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------- 56
A + +AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 179 ANTANAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDRQTQAT 238
Query: 57 --------------------KVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDN 94
K +S + + L+++L+I Q +++ AL F + L +N
Sbjct: 239 TLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIALEIRQAANIVRALELFVKPDVLSGEN 298
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCR 153
Y C KC K ATK+F++ + V L LKRF N+ KI+ V P +L +M
Sbjct: 299 AYMCAKCKKKVPATKRFTVHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQS 358
Query: 154 R------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVV 205
L + ++H G S +GHY C S+G ++ D V +SN++ V N AYV+
Sbjct: 359 SGDPVMYGLYAVLVHPGYSCHAGHYYCYVKASNGQWYQMNDSMVHSSNIKVVLNQQAYVL 418
Query: 206 IYELLP 211
Y +P
Sbjct: 419 FYLRIP 424
>gi|10434352|dbj|BAB14232.1| unnamed protein product [Homo sapiens]
Length = 1198
Score = 100 bits (248), Expect = 6e-19, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + H + SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHPTHSPGQSSPR 434
>gi|410266774|gb|JAA21353.1| ubiquitin specific peptidase 42 [Pan troglodytes]
Length = 1316
Score = 100 bits (248), Expect = 6e-19, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + H + SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHPTHSPGQSSPR 434
>gi|397526145|ref|XP_003832997.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Pan paniscus]
Length = 1316
Score = 100 bits (248), Expect = 6e-19, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + H + SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHPTHSPGQSSPR 434
>gi|114612043|ref|XP_527662.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Pan
troglodytes]
gi|410215148|gb|JAA04793.1| ubiquitin specific peptidase 42 [Pan troglodytes]
gi|410304720|gb|JAA30960.1| ubiquitin specific peptidase 42 [Pan troglodytes]
Length = 1316
Score = 100 bits (248), Expect = 6e-19, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + H + SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHPTHSPGQSSPR 434
>gi|332265913|ref|XP_003281959.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Nomascus
leucogenys]
Length = 1315
Score = 100 bits (248), Expect = 6e-19, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + H + SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHPTHSPGQSSPR 434
>gi|119575449|gb|EAW55047.1| ubiquitin specific peptidase 42, isoform CRA_a [Homo sapiens]
Length = 1234
Score = 100 bits (248), Expect = 6e-19, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + H + SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHPTHSPGQSSPR 434
>gi|383422111|gb|AFH34269.1| ubiquitin carboxyl-terminal hydrolase 42 [Macaca mulatta]
Length = 1317
Score = 100 bits (248), Expect = 6e-19, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + H + SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHPTHSPGQSSPR 434
>gi|109065910|ref|XP_001090104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Macaca
mulatta]
Length = 1317
Score = 100 bits (248), Expect = 7e-19, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + H + SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHPTHSPGQSSPR 434
>gi|402862840|ref|XP_003895748.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Papio anubis]
Length = 1316
Score = 100 bits (248), Expect = 7e-19, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + H + SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHPTHSPGQSSPR 434
>gi|194376936|dbj|BAG63029.1| unnamed protein product [Homo sapiens]
Length = 1044
Score = 100 bits (248), Expect = 7e-19, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 5 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 61
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 62 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 121
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 122 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 181
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 182 EYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 241
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + H + SPG PR
Sbjct: 242 IRSVLSQQAYVLFY-IRSHDVKNGGELTHPTHSPGQSSPR 280
>gi|297796717|ref|XP_002866243.1| ubiquitin-specific protease 23 [Arabidopsis lyrata subsp. lyrata]
gi|297312078|gb|EFH42502.1| ubiquitin-specific protease 23 [Arabidopsis lyrata subsp. lyrata]
Length = 863
Score = 99.8 bits (247), Expect = 8e-19, Method: Composition-based stats.
Identities = 76/253 (30%), Positives = 121/253 (47%), Gaps = 46/253 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH-------- 52
++K + + +G + P+ +++ L+ I+ +F R ED+HE+++ L+E +H
Sbjct: 155 IQKHVRTARQATGRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHKCSLPSGV 214
Query: 53 ---------RSYLKVISG---------------SNN----LELSLDIYQLSSLDEALGQF 84
RS + I G SN L+LSLDI + SL AL +F
Sbjct: 215 PSESSDAYRRSLVHNIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDISKADSLQRALSRF 274
Query: 85 FAKEYLVR-DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPL 142
A E L +YQCE+C K +A KQ ++ K P V + LKRF + KI V
Sbjct: 275 TAVELLDDGSKVYQCERCKQKVKARKQLTVSKAPYVLTIHLKRFEAHRSEKIDRKVDFAS 334
Query: 143 YLEFGKFM------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNL 196
++ F+ + + L ++H+G SS SGHY C TSSG ++ D+RV +
Sbjct: 335 AIDMKPFVSGPHEGNLKYTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVLQVSE 394
Query: 197 QQVTN--AYVVIY 207
+ V N AY++ Y
Sbjct: 395 KTVFNQKAYMLFY 407
>gi|68533556|gb|AAH98528.1| Usp36 protein [Danio rerio]
Length = 914
Score = 99.8 bits (247), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 114/246 (46%), Gaps = 44/246 (17%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------- 56
A + +AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 179 ANTANAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDRQTQAT 238
Query: 57 --------------------KVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDN 94
K +S + + L+++L+I Q +++ AL F + L +N
Sbjct: 239 TLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIALEIRQAANIVRALELFVKPDVLSGEN 298
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCR 153
Y C KC K ATK+F++ + V L LKRF N+ KI+ V P +L +M
Sbjct: 299 AYMCAKCKKKVPATKRFTVHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQS 358
Query: 154 R------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVV 205
L + ++H G S +GHY C S+G ++ D V +SN++ V N AYV+
Sbjct: 359 SGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSMVHSSNIKVVLNQQAYVL 418
Query: 206 IYELLP 211
Y +P
Sbjct: 419 FYLRIP 424
>gi|168051663|ref|XP_001778273.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162670370|gb|EDQ56940.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 375
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 79/262 (30%), Positives = 114/262 (43%), Gaps = 66/262 (25%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE-------------------- 49
A G I P I+ L+ I+ F +R ED+HE++ YLIE
Sbjct: 13 ASPGGVISPTYIVKNLRCISKSFRPWRQEDAHEYMRYLIESLDNSCTSAGRGERGVRGAG 72
Query: 50 -----------------------GIHRSYLK--VISGSNN-----LELSLDIYQLSSLDE 79
G RS +K V S +N L+LSL+I + SL +
Sbjct: 73 AQSSSSSSSSSPQHPSLIQQMFGGQLRSQVKCTVCSTCSNTYDPLLDLSLEIVRADSLTK 132
Query: 80 ALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQ 139
AL +F A E L DN Y C C K A KQF+I+K PIV + KRF+ S +
Sbjct: 133 ALNRFTAVEALEGDNQYHCATCKQKVCALKQFTIDKSPIVLTIQFKRFSA--SGSSSGGK 190
Query: 140 VPLYLEFGKFMHCRR------------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFG 187
+ ++FG+ + R +L + ++H G S+ SGHY C TS G +H
Sbjct: 191 IDKKIDFGRTLAMRPYISNPEDSDANYSLYAVLVHAGWSTHSGHYYCFVRTSGGLWHNLD 250
Query: 188 DDRVQASNLQQV--TNAYVVIY 207
D RV+ + + V AY++ Y
Sbjct: 251 DSRVRQVSEKTVLEQKAYILFY 272
>gi|403285988|ref|XP_003934290.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Saimiri
boliviensis boliviensis]
Length = 1319
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 123/268 (45%), Gaps = 52/268 (19%)
Query: 13 GSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLE------ 66
G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +GSN L+
Sbjct: 171 GDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---NGSNKLDRHTQAT 227
Query: 67 --------------------------------LSLDIYQLSSLDEALGQFFAKEYLVRDN 94
++L+I S+++AL QF E L +N
Sbjct: 228 TLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGEN 287
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCR 153
Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P YL+ +M
Sbjct: 288 SYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQP 347
Query: 154 RN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
L + ++H G + +GHY C S+G ++ D V S+++ V AYV+
Sbjct: 348 NGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVL 407
Query: 206 IYELLPSSLHHLNSSLHSS-SPGSVEPR 232
Y + + + HS+ SPG PR
Sbjct: 408 FY-IRSHDVKNGGELTHSTHSPGQSSPR 434
>gi|392592963|gb|EIW82289.1| cysteine proteinase [Coniophora puteana RWD-64-598 SS2]
Length = 503
Score = 99.8 bits (247), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 73/235 (31%), Positives = 104/235 (44%), Gaps = 42/235 (17%)
Query: 15 AIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------------ 56
A P L+ +KL+LIA R ED+HEFL Y ++ + RS L
Sbjct: 18 AFTPYLVTSKLQLIAKSMRRGRQEDAHEFLRYAVDALQRSCLSGYPPKMDHKLAETTWVH 77
Query: 57 KVISG------------------SNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQC 98
K+ G L+LSLDIY +SL EAL +F EYL + Y+C
Sbjct: 78 KLFGGRLRSRVTCRDCGYNSDTYDRILDLSLDIYGSNSLREALRKFVTVEYLKGQDKYKC 137
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMH-----CR 153
EKC A K+F++ + P+V + LKRF+ L KI + +L M
Sbjct: 138 EKCKKPVVAEKKFNVHEAPVVLTIHLKRFSPLGRKIGHFIHYDEHLALQPAMSEGSFGPS 197
Query: 154 RNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQ-QVTNAYVVIY 207
L + H G SGHY +++G ++ DD V S + V NAY++ Y
Sbjct: 198 YTLYGVICHAGGGPNSGHYYAYIKSANGQWYEMNDDMVAPSKVAVGVKNAYILFY 252
>gi|380791957|gb|AFE67854.1| ubiquitin carboxyl-terminal hydrolase 42, partial [Macaca mulatta]
Length = 743
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/254 (27%), Positives = 116/254 (45%), Gaps = 50/254 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQV--TNAYVVIY 207
++ V AYV+ Y
Sbjct: 396 IRSVLSQQAYVLFY 409
>gi|326432192|gb|EGD77762.1| hypothetical protein PTSG_08851 [Salpingoeca sp. ATCC 50818]
Length = 1156
Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats.
Identities = 71/243 (29%), Positives = 110/243 (45%), Gaps = 51/243 (20%)
Query: 16 IIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL-----------------KV 58
++P+ IIN L+ I F +Y+ +D+HEF + L++ + + L +
Sbjct: 176 VLPKGIINHLRQINKAFRHYQQQDAHEFFICLLDAMQTALLGDYKNLDLRVQETTVLHHI 235
Query: 59 ISG--------------SNNLE----LSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEK 100
G SN E LS+DI +SL AL QF KE L + N Y C
Sbjct: 236 FGGYLRSQIQCVRCKHCSNTFESFFDLSIDIKAANSLTRALQQFVTKELLFKTNSYSCSG 295
Query: 101 CGYKTEATKQFSIEKPPIVFILLLKRFNYLC---LKISCAVQVPLYLEFGKFMH------ 151
C K ATKQ +I + P V + LKRF+++ K+ V P+ L +F+
Sbjct: 296 CKNKVPATKQLTIHRLPNVLCIQLKRFSFMSHFGSKLRHKVSYPMQLNVHEFLSRSIRSR 355
Query: 152 -----CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYV 204
CR L ++H G++ SGHY ++G ++ DD V+ S +V N AY+
Sbjct: 356 ISRGACRYELYGVLVHLGATLSSGHYIAYVRAANGMWYCADDDDVRFSKENEVLNQAAYM 415
Query: 205 VIY 207
+ Y
Sbjct: 416 LFY 418
>gi|189517356|ref|XP_688241.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Danio rerio]
Length = 1104
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 74/246 (30%), Positives = 114/246 (46%), Gaps = 44/246 (17%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------- 56
A + +AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 179 ANTANAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYPKLDRQTQAT 238
Query: 57 --------------------KVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDN 94
K +S + + L+++L+I Q +++ AL F + L +N
Sbjct: 239 TLVHQIFGGYLRSRVKCSICKSVSDTYDPYLDIALEIRQAANIVRALELFVKPDVLSGEN 298
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCR 153
Y C KC K ATK+F++ + V L LKRF N+ KI+ V P +L +M
Sbjct: 299 AYMCAKCKKKVPATKRFTVHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQS 358
Query: 154 R------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVV 205
L + ++H G S +GHY C S+G ++ D V +SN++ V N AYV+
Sbjct: 359 SGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSMVHSSNIKVVLNQQAYVL 418
Query: 206 IYELLP 211
Y +P
Sbjct: 419 FYLRIP 424
>gi|440803342|gb|ELR24249.1| Ubiquitin carboxylterminal hydrolase [Acanthamoeba castellanii str.
Neff]
Length = 916
Score = 99.4 bits (246), Expect = 1e-18, Method: Composition-based stats.
Identities = 76/251 (30%), Positives = 115/251 (45%), Gaps = 29/251 (11%)
Query: 2 RKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISG 61
R +AA +A SG AI+P+ I+++L+ I HF R ED+ EFL YL+ G+H+S L
Sbjct: 62 RHVVAALKATSG-AIVPKEIVSQLRAIVKHFRLGRQEDAQEFLCYLLSGMHKSSL----- 115
Query: 62 SNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEK---CGYKTEATKQFSIEKPPI 118
+L I Q S + G +C C ++ A KQ SI + P
Sbjct: 116 PQGEKLEARIEQTSVVHRIFGGHLQSS-------LECTAMRLCAKRSRAKKQLSIHEAPN 168
Query: 119 VFILLLKRFNYLCL---KISCAVQVPLYLEFGKFMHCRR-------NLVSAVIHHGSSSF 168
V + LKRF+Y + KIS + P L FM + +L ++H G +
Sbjct: 169 VLAIQLKRFSYRSMFGGKISKFISYPAKLSLKPFMSKNQYDSNPCYDLYGVLVHSGYDTR 228
Query: 169 SGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIYELLPSSL-HHLNSSLHSSS 225
+GHY C S+G +H D + + +QV AY++ Y P+SL LN + S S
Sbjct: 229 AGHYYCYIKNSNGIWHEMNDSTRRQVSQEQVMKQQAYLLFYVRSPASLPAQLNGNESSES 288
Query: 226 PGSVEPRTHHR 236
+ + R
Sbjct: 289 DQEAKSKKRKR 299
>gi|351704980|gb|EHB07899.1| Ubiquitin carboxyl-terminal hydrolase 42, partial [Heterocephalus
glaber]
Length = 1272
Score = 99.4 bits (246), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 71/242 (29%), Positives = 114/242 (47%), Gaps = 50/242 (20%)
Query: 13 GSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLE------ 66
G + P IIN+++ +A HF + ED+HEFL Y+++G+ ++ L +GSN L+
Sbjct: 154 GDVLKPMSIINEMEDVATHFHFGSQEDAHEFLQYIVDGMQKACL---NGSNKLDRHTQAT 210
Query: 67 --------------------------------LSLDIYQLSSLDEALGQFFAKEYLVRDN 94
++L+I S+++AL QF E L +N
Sbjct: 211 TLVCQIFGGYLRSRVKCLNCKGVSDTFEPFLDITLEIKASPSVNKALEQFVKPEQLDGEN 270
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCR 153
Y+C KC A+K+F+I + V L LKRF N KI+ V+ P YL+ +M +
Sbjct: 271 AYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANTTGGKIAKDVKYPEYLDIRPYMSQQ 330
Query: 154 RN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
L + ++H G + SGHY C S+G ++ D V S+++ V AYV+
Sbjct: 331 NGEPIIYVLYAVLVHAGFNCHSGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVL 390
Query: 206 IY 207
Y
Sbjct: 391 FY 392
>gi|348568324|ref|XP_003469948.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 42-like [Cavia porcellus]
Length = 1224
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 109/242 (45%), Gaps = 50/242 (20%)
Query: 13 GSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLE------ 66
G I P +IN+++ IA HF+ ED+HEFL + ++ + + L SGSN L+
Sbjct: 167 GDVIKPMFVINEMQRIASHFQIGEQEDAHEFLQHTVDAMQEACL---SGSNELDRHTQAT 223
Query: 67 --------------------------------LSLDIYQLSSLDEALGQFFAKEYLVRDN 94
++L+I +++EAL QF E L +N
Sbjct: 224 TLICQVFGGYLRSRVQCLNCKGVSDTFDPYLDITLEIKGARTINEALAQFVKPEQLDGEN 283
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCR 153
YQC KC A+K F+I + V IL LKRF N KI+ V+ P YL+ +M
Sbjct: 284 CYQCSKCKIMVPASKNFTIHQSSNVLILSLKRFSNSTGGKIAKDVKYPEYLDIRPYMSQP 343
Query: 154 RN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
L + +IH G + GHY C S+G ++ D +V S+ + V AYV+
Sbjct: 344 NGEPIVYTLYAVLIHAGYNCRVGHYLCHVKASNGLWYQMNDSKVSPSDTESVLSQQAYVL 403
Query: 206 IY 207
Y
Sbjct: 404 FY 405
>gi|344289865|ref|XP_003416661.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Loxodonta
africana]
Length = 1431
Score = 98.6 bits (244), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 123/268 (45%), Gaps = 52/268 (19%)
Query: 13 GSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLE------ 66
G I P +IN+++ IA HF + ED+HEFL + ++ + ++ L +GSN L+
Sbjct: 171 GDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQHTVDAMQKACL---NGSNKLDRHTQAT 227
Query: 67 --------------------------------LSLDIYQLSSLDEALGQFFAKEYLVRDN 94
++L+I S+++AL QF E L +N
Sbjct: 228 TLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGEN 287
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCR 153
Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P YL+ +M
Sbjct: 288 SYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQP 347
Query: 154 RN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
L + ++H G + +GHY C S+G ++ D V S+++ V AYV+
Sbjct: 348 NGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVL 407
Query: 206 IYELLPSSLHHLNSSLHSS-SPGSVEPR 232
Y + + + HS+ SPG PR
Sbjct: 408 FY-IRSHDVKNGGELTHSTHSPGQSSPR 434
>gi|395825848|ref|XP_003786132.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Otolemur
garnettii]
Length = 1120
Score = 98.6 bits (244), Expect = 2e-18, Method: Composition-based stats.
Identities = 84/287 (29%), Positives = 130/287 (45%), Gaps = 51/287 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 169 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYA 228
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 229 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANIVRALELFV 288
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 289 KPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 348
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V S+ +
Sbjct: 349 NIRPYMSQNSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMDDSLVHPSSGKA 408
Query: 199 VTN--AYVVIYELLPSSLHH----LNSSLHS--SSPGSVEPRTHHRN 237
V + AYV+ Y +P S ++ ++HS S PG V P +N
Sbjct: 409 VLSQQAYVLFYLRIPRSKKSPEGPVSKTVHSLPSRPG-VAPDHTKKN 454
>gi|395330004|gb|EJF62389.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
Length = 691
Score = 98.2 bits (243), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 72/245 (29%), Positives = 106/245 (43%), Gaps = 50/245 (20%)
Query: 15 AIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------------ 56
+ IP +I KL +IA H R EDSHEFL Y ++ + RS L
Sbjct: 188 STIPYPVITKLHVIAKHMRRGRQEDSHEFLRYFVDALQRSALAGAPPRAEHRHRKVDPKL 247
Query: 57 -------KVISG------------------SNNLELSLDIYQLSSLDEALGQFFAKEYLV 91
K+ G L+LS+DI ++SL +AL +F A ++L
Sbjct: 248 AEKTWVYKIFGGLLRSRVSCLSCGYNSDTFDRMLDLSVDIAGVASLRDALRKFVAVDHLR 307
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMH 151
+ Y+CEKC A KQF+I + P V + LKRF+ + KI+ ++ L FM
Sbjct: 308 GADKYKCEKCKKPVNADKQFTIHEAPAVLTVHLKRFSPMGRKIAIPIRYDERLSLEPFMS 367
Query: 152 -----CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQ--ASNLQQVTNAYV 204
L + H G+ SGHY ++G +H DD V + + NAY+
Sbjct: 368 EGSFGPNYTLYGVISHAGNGPNSGHYYAHVKGANGRWHEMNDDYVAPLSGVPTSLKNAYI 427
Query: 205 VIYEL 209
+ Y L
Sbjct: 428 LFYIL 432
>gi|348568306|ref|XP_003469939.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Cavia
porcellus]
Length = 1328
Score = 98.2 bits (243), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 77/268 (28%), Positives = 122/268 (45%), Gaps = 52/268 (19%)
Query: 13 GSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLE------ 66
G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +GSN L+
Sbjct: 169 GDVIKPMFVINEMQRIARHFRFGNQEDAHEFLQYTVDAMQKACL---NGSNKLDRHTQAT 225
Query: 67 --------------------------------LSLDIYQLSSLDEALGQFFAKEYLVRDN 94
++L+I S+++AL QF E L +N
Sbjct: 226 TLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAPSVNKALEQFVKPEQLDGEN 285
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCR 153
Y+C KC A+K+F+I + V L LKRF N KI+ V+ P YL+ +M
Sbjct: 286 SYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANSTGGKIAKDVKYPEYLDIRPYMSQP 345
Query: 154 RN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
L + ++H G + +GHY C S+G ++ D V S+++ V AYV+
Sbjct: 346 NGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVL 405
Query: 206 IYELLPSSLHHLNSSLHSS-SPGSVEPR 232
Y + + + HS+ SPG PR
Sbjct: 406 FY-IRSHDVKNGGELTHSTHSPGQSSPR 432
>gi|224075485|ref|XP_002187464.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Taeniopygia
guttata]
Length = 1079
Score = 98.2 bits (243), Expect = 3e-18, Method: Composition-based stats.
Identities = 76/259 (29%), Positives = 119/259 (45%), Gaps = 47/259 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P II LK I+H+ + R ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHMIQTFANSGNAIKPLSIIRDLKKISHNLRFGRQEDAHEFLRYTIDAMQKACLNGYT 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L++ + +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCLECKTVSDTYDPYLDVTLEVERAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----LKISCAVQVP 141
E L DN Y+C C K A+K+F+I + V + LKRF KI+ V P
Sbjct: 290 KPEQLGGDNAYRCSMCRKKVLASKRFTIHRASNVLTISLKRFGSCSSSGGRKITKDVGYP 349
Query: 142 LYLEFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
+L+ FM + L + ++H G S +GHY C S+G ++ D V SN
Sbjct: 350 EFLDIRPFMSEPKGDPITYGLYAVLVHSGYSCNAGHYFCYVKASNGQWYRMNDHEVHPSN 409
Query: 196 LQQVTN--AYVVIYELLPS 212
++ V N AYV+ Y L S
Sbjct: 410 IKVVLNQQAYVLFYLRLGS 428
>gi|344239651|gb|EGV95754.1| Ubiquitin carboxyl-terminal hydrolase 42 [Cricetulus griseus]
Length = 838
Score = 97.4 bits (241), Expect = 4e-18, Method: Composition-based stats.
Identities = 73/261 (27%), Positives = 119/261 (45%), Gaps = 52/261 (19%)
Query: 20 LIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLE------------- 66
+IN+++ IA HF + ED+HEFL Y ++ + ++ L +GSN L+
Sbjct: 2 FVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---NGSNKLDRHTQATTLVCQIF 58
Query: 67 -------------------------LSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKC 101
++L+I S+ +AL QF E L +N Y+C KC
Sbjct: 59 GGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALEQFVKPEQLDGENSYKCSKC 118
Query: 102 GYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRRN----- 155
A+K+F+I + V + LKRF N+ KI+ V+ P YL+ +M
Sbjct: 119 KKMVPASKRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIY 178
Query: 156 -LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIYELLPS 212
L + ++H G + +GHY C S+G ++ D V S+++ V N AYV+ Y +
Sbjct: 179 VLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLNQQAYVLFY-IRSH 237
Query: 213 SLHHLNSSLHSS-SPGSVEPR 232
+ + H + SPG PR
Sbjct: 238 DVKNGGEPAHPTHSPGQSSPR 258
>gi|302696891|ref|XP_003038124.1| hypothetical protein SCHCODRAFT_37924 [Schizophyllum commune H4-8]
gi|300111821|gb|EFJ03222.1| hypothetical protein SCHCODRAFT_37924, partial [Schizophyllum
commune H4-8]
Length = 314
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 77/251 (30%), Positives = 113/251 (45%), Gaps = 45/251 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ T Q+ + SA P+ I LK A Y R EDSHEFL + IEG+ RS L
Sbjct: 63 MKYTAMRSQSSNKSAFNPDGITRNLKAFAKSLRYGRQEDSHEFLRHAIEGLQRSCLAGQP 122
Query: 57 -KVIS-------------------------GSNN------LELSLDIYQLSSLDEALGQF 84
KV G N+ L+LSLDI++ SSL +AL F
Sbjct: 123 QKVDPKLAETSWVHQLFGGQLRSRVHCKGCGHNSDTYDSILDLSLDIHRTSSLKDALKSF 182
Query: 85 FAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCA------V 138
A +YL + Y+C+ C A K+F+I K P+V + LKRF+ K++ +
Sbjct: 183 VAPDYLKGSDKYKCDHCKKYVNAEKRFTINKAPLVLTIHLKRFSPFGSKLTNLLHYDEHI 242
Query: 139 QVPLYLEFGKFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN--L 196
+ Y+ G F R +L + H GS SGHY + G ++ D+ V +
Sbjct: 243 TLKPYMSEGSFGP-RYSLYGVICHSGSGPNSGHYFSFVKSKQGRWYEMNDESVTPCSKPY 301
Query: 197 QQVTNAYVVIY 207
+ AY+++Y
Sbjct: 302 PMLKTAYMLMY 312
>gi|38014646|gb|AAH60390.1| Usp36 protein [Xenopus laevis]
Length = 715
Score = 97.1 bits (240), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 75/253 (29%), Positives = 115/253 (45%), Gaps = 44/253 (17%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------- 56
A SG+ + P I +LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 177 ANSGNNVKPVSFIRELKRIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYARLDRHSQAT 236
Query: 57 --------------------KVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDN 94
K +S + + L+++L+I + ++ AL F + L +N
Sbjct: 237 SLVHQIFGGYLRSRVTCSICKNVSDTYDPYLDIALEIRNVPNIVCALEMFVKSDILSGEN 296
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCR 153
Y C +C K A+K+FS+ + V L LKRF N KI+ V P +L +M R
Sbjct: 297 AYMCARCKKKVPASKRFSVHRDSNVLTLSLKRFANSSGGKITKEVGYPEFLNLRPYMSQR 356
Query: 154 RN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVV 205
L + ++H G S +GHY C S+G + D V ASN++ V N AYV+
Sbjct: 357 NGNPVMYALYAVLVHSGYSCHAGHYYCYVKASNGQWFQMNDSLVHASNIKVVLNQQAYVL 416
Query: 206 IYELLPSSLHHLN 218
Y + + H N
Sbjct: 417 FYLRVSENRKHDN 429
>gi|356564905|ref|XP_003550687.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Glycine
max]
Length = 903
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 73/243 (30%), Positives = 117/243 (48%), Gaps = 47/243 (19%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL--------------- 56
+G + PE ++ L+ I+ +F R ED+HE+++ L+E +H+ L
Sbjct: 157 TGRILAPEDLVGNLRCISRNFRNARQEDAHEYMVNLLECMHKCCLPSGIPSESPGAYEKS 216
Query: 57 ---KVISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVR-DN 94
K+ G SN L+LSL+I++ SL +AL F A E+L +
Sbjct: 217 FVHKIFGGRLRSQVKCHQCSYCSNKFDPFLDLSLEIFKADSLQKALSNFTAAEWLDGGEK 276
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY--LCLKISCAVQVPLYLEFGKFM-- 150
Y C++C K +A KQ +I K P V + LKRF+ KI VQ L+ F+
Sbjct: 277 EYHCQRCKQKVKALKQLTIHKAPYVLTIHLKRFHAHDTGQKIKKKVQFGCALDLKPFVSG 336
Query: 151 ----HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYV 204
+ +L ++H GSS+ SGHY C TS+ ++ D+RV + ++V N AY+
Sbjct: 337 SNDGDVKYSLYGVLVHAGSSTHSGHYYCYVRTSNNMWYTLDDNRVSHVSEREVLNQQAYM 396
Query: 205 VIY 207
+ Y
Sbjct: 397 LFY 399
>gi|390459112|ref|XP_002744123.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Callithrix
jacchus]
Length = 1319
Score = 96.7 bits (239), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 76/268 (28%), Positives = 122/268 (45%), Gaps = 52/268 (19%)
Query: 13 GSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLE------ 66
G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +GSN L+
Sbjct: 171 GDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---NGSNKLDRHTQAT 227
Query: 67 --------------------------------LSLDIYQLSSLDEALGQFFAKEYLVRDN 94
++L+I S+++AL QF E L +N
Sbjct: 228 TLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGEN 287
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCR 153
Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P YL+ +M
Sbjct: 288 SYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQP 347
Query: 154 RN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
L + ++H G + +GHY C +G ++ D V S+++ V AYV+
Sbjct: 348 NGEPIVYVLYAVLVHTGFNCHAGHYFCYIKAINGLWYQMNDSIVSTSDIRSVLSQQAYVL 407
Query: 206 IYELLPSSLHHLNSSLHSS-SPGSVEPR 232
Y + + + HS+ SPG PR
Sbjct: 408 FY-IKSHDVKNGGELTHSTHSPGQSSPR 434
>gi|260801080|ref|XP_002595424.1| hypothetical protein BRAFLDRAFT_69255 [Branchiostoma floridae]
gi|229280670|gb|EEN51436.1| hypothetical protein BRAFLDRAFT_69255 [Branchiostoma floridae]
Length = 965
Score = 96.3 bits (238), Expect = 9e-18, Method: Composition-based stats.
Identities = 73/245 (29%), Positives = 111/245 (45%), Gaps = 48/245 (19%)
Query: 15 AIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------------ 56
+I P IIN+LK IA ++ R ED+HEF + ++ + R+ L
Sbjct: 198 SIRPMTIINRLKSIAKTMQFGRQEDAHEFFMSVVNAMQRACLMNCNINPNKNVDTSTANT 257
Query: 57 ----KVISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVRDN 94
+V SG SN L+L LDI + SS+ + L ++ E + +N
Sbjct: 258 TIVYQVFSGYCRSQVRCCRCSNLSNTFDPFLDLPLDI-RGSSVQQCLERYVRAEQMSDEN 316
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMHCR- 153
Y CEKC K +A K+ SI + P V + LKRFN + LK++ VQ + +M
Sbjct: 317 AYSCEKCKRKCQAVKKLSIHRAPNVLTISLKRFNNMGLKVTKEVQYSETMNLRAYMSQEG 376
Query: 154 ----RNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
L + ++H G S GHY C +G +H D V+ L V + AY++ Y
Sbjct: 377 PPVIYKLYAVLVHQGFSCHGGHYYCFIKAPNGVWHMMNDSLVRQVGLNTVLSQQAYLLFY 436
Query: 208 ELLPS 212
+PS
Sbjct: 437 IRIPS 441
>gi|388580255|gb|EIM20571.1| cysteine proteinase [Wallemia sebi CBS 633.66]
Length = 515
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 76/258 (29%), Positives = 111/258 (43%), Gaps = 43/258 (16%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL--------------- 56
SG + P ++ LK IA H R ED+ EFL Y ++ + SYL
Sbjct: 174 SGGSFAPAPVVRNLKAIARHMTVGRQEDAQEFLRYAVDALQASYLSNYPKTVKEKHSESN 233
Query: 57 ---KVISG------------------SNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNL 95
K+ G L+LS+++ S++ E+ F A + L N
Sbjct: 234 PIHKIFGGKLRSRVLCQNSKHASDTFDTFLDLSVNVKGCSNIQESFKSFTALDRLEGANK 293
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFM----- 150
Y+CE C ATKQF++ + P + LKRF+ L K++ ++ L+ K+M
Sbjct: 294 YKCENCKKPVAATKQFTVHEAPQCLTVHLKRFSPLGQKLNGSLSFDENLDIQKYMSKGQQ 353
Query: 151 HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQ-QVTNAYVVIYEL 209
+ L V H+G S+ SGHY +G ++ DD V S NAYV+ YE
Sbjct: 354 SPKYRLYGVVSHYGGSARSGHYIAHVKAPNGRWYEMNDDLVSPSKPPFGSKNAYVLFYEK 413
Query: 210 -LPSSLHHLNSSLHSSSP 226
SSL S SSSP
Sbjct: 414 ERSSSLKDAVQSATSSSP 431
>gi|301616377|ref|XP_002937632.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Xenopus
(Silurana) tropicalis]
Length = 809
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 73/242 (30%), Positives = 110/242 (45%), Gaps = 44/242 (18%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------- 56
A SG+ + P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 177 ANSGNNVKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGYARLDRHSQAT 236
Query: 57 --------------------KVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDN 94
K +S + + L+++L+I + ++ AL F + L +N
Sbjct: 237 SLVHQIFGGYLRSRVTCSVCKNVSDTYDPYLDIALEIRNVPNIVCALEMFVKSDVLSGEN 296
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCR 153
Y C +C K A K+FS+ + V L LKRF N KI+ V P +L +M R
Sbjct: 297 AYMCARCKKKVPACKRFSVHRESNVLTLSLKRFANSSGGKITKEVGYPEFLNLRPYMSQR 356
Query: 154 RN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVV 205
L + ++H G S +GHY C S+G ++ D V ASN++ V N AYV+
Sbjct: 357 NGVPVMYALYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHASNIKVVLNQQAYVL 416
Query: 206 IY 207
Y
Sbjct: 417 FY 418
>gi|449476389|ref|XP_002192172.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42, partial
[Taeniopygia guttata]
Length = 1282
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 69/240 (28%), Positives = 113/240 (47%), Gaps = 44/240 (18%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL--------------- 56
S +AI P +IN LK I HF + ED+HEFL + ++ + ++ L
Sbjct: 166 SNNAIKPTSVINGLKRIGKHFHFGSQEDAHEFLCFTVDALQKACLNGSTKLDRSSQATTL 225
Query: 57 ------------------KVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLY 96
K +S + L+++LDI ++S+ AL QF E L +N Y
Sbjct: 226 IYQIFGGYLRSRVKCLNCKAVSDTYEPFLDVTLDIKAVTSVTRALEQFVKPEQLDGENSY 285
Query: 97 QCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRRN 155
+C KC A+K+++I + V + LKRF N+ KI+ V+ P YL+ +M
Sbjct: 286 KCSKCKKMVPASKRYTIHRSSNVLTISLKRFANFTGGKINKDVKYPEYLDLRAYMSQSIG 345
Query: 156 ------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
L + ++H G + +GHY C +G ++ D V+ S+++ V N AYV+ Y
Sbjct: 346 EPLIYALYAVLVHSGFNCNAGHYLCFIKAGNGLWYRMNDASVELSDIKTVLNQQAYVLFY 405
>gi|363739509|ref|XP_414742.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Gallus gallus]
Length = 1323
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 68/237 (28%), Positives = 111/237 (46%), Gaps = 44/237 (18%)
Query: 15 AIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------------ 56
AI P ++++LK I HF + ED+HEFL + ++ + ++ L
Sbjct: 168 AIKPAFVVHELKRIGKHFRFGAQEDAHEFLRFTVDAMQQACLHGCTILDRSSQATTIIHQ 227
Query: 57 ---------------KVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCE 99
K +S + L++ LDI +SS+ +AL QF E L +N Y+C
Sbjct: 228 IFGGFLRSRVKCLNCKAVSDTYEAFLDIPLDIKTVSSVTKALEQFVKPEQLDGENCYKCS 287
Query: 100 KCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRRN--- 155
KC A+K+F+I + V + LKRF N+ KI+ V+ P YL+ +M
Sbjct: 288 KCKKMVPASKRFTIHRSSNVLTISLKRFANFTGGKINKEVKYPEYLDLRAYMSQSIGEPL 347
Query: 156 ---LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G +S +GHY C + G ++ D V SN++ V AY++ Y
Sbjct: 348 IYALYAVLVHSGVNSHAGHYFCFIKAADGLWYQMNDASVVQSNIKTVLGQQAYLLFY 404
>gi|168013682|ref|XP_001759420.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162689350|gb|EDQ75722.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 304
Score = 95.5 bits (236), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 79/238 (33%), Positives = 109/238 (45%), Gaps = 44/238 (18%)
Query: 13 GSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------------------- 49
G P I N+L+ A HF R ED+HE L Y IE
Sbjct: 62 GPIDAPIKIHNRLQYFAKHFRNGRQEDAHELLRYAIEACNHVCVQLHKIVQVGSKEEPNT 121
Query: 50 -------GIHRSYLKVISGSNN-------LELSLDIYQLSSLDEALGQFFAKEYLVRDNL 95
G+ +S +K +S S ++L+LDI +LSSL EAL +FF E L +N
Sbjct: 122 VVKEIFGGLLQSQVKCLSCSTESNKLDEIMDLTLDIVRLSSLSEALCRFFQPEVLDGENK 181
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRR 154
Y+C++C + A KQ S+ + P V ++ +KRF + KI V L +M CR
Sbjct: 182 YRCDQCKKLSPARKQMSVYRAPNVLVIQMKRFEDIYGGKIDRHVHFEERLCLAGYM-CRA 240
Query: 155 ---NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+L V+H GSS SGHY SSG ++ D RV N Q V AY++ Y
Sbjct: 241 GKYSLYGVVVHAGSSQDSGHYYSYVKESSGKWYCCDDARVSQVNAQTVLAEKAYMLFY 298
>gi|195337713|ref|XP_002035470.1| GM14719 [Drosophila sechellia]
gi|251765134|sp|B4HUI5.1|UBP36_DROSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 36; AltName:
Full=Deubiquitinating enzyme 36; AltName: Full=Protein
scrawny; AltName: Full=Ubiquitin thioesterase 36;
AltName: Full=Ubiquitin-specific-processing protease 36
gi|194128563|gb|EDW50606.1| GM14719 [Drosophila sechellia]
Length = 1059
Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats.
Identities = 78/258 (30%), Positives = 110/258 (42%), Gaps = 70/258 (27%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL A Q+ SA+ P LI +KLK I H R ED+HEFL +L+E + R+YL
Sbjct: 220 MAKTLLATQSNQ-SAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFR 278
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + SL++A
Sbjct: 279 NYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFE 338
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
F++E L D Y+CE C K LKRF+ + K++ +
Sbjct: 339 GHFSRERL-EDMGYKCEGCKKK-------------------LKRFSMIGNKLTKQISFKP 378
Query: 143 YLEFGKFMH---------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ K+ LVS V H G+S GHY IGST +GS++ F D V+
Sbjct: 379 RIDLSKYAARSPAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRP 438
Query: 194 SNLQQV--TNAYVVIYEL 209
+Q V TNAY++ +EL
Sbjct: 439 ITMQNVCNTNAYIMFFEL 456
>gi|356498762|ref|XP_003518218.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Glycine
max]
Length = 879
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/243 (29%), Positives = 116/243 (47%), Gaps = 47/243 (19%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL--------------- 56
+G + PE ++ L+ I+ +F R ED+HE+++ L+E +H+ L
Sbjct: 154 TGRILSPEDLVGNLRCISRNFRNARQEDAHEYMVNLLECMHKCCLPSGIPSESPGAYEKS 213
Query: 57 ---KVISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVR-DN 94
K+ G SN L+LSL+I++ SL +AL F A E+L +
Sbjct: 214 FVHKIFGGRLRSQVKCHQCSYCSNKFDPFLDLSLEIFKADSLQKALSNFTAAEWLDGGEK 273
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY--LCLKISCAVQVPLYLEFGKFM-- 150
Y C++C K A KQ +I K P V + LKRF+ KI +Q L+ F+
Sbjct: 274 EYHCQRCKQKVRALKQLTIHKAPYVLTIHLKRFHAHDPGQKIKKKIQFGCALDLKPFVSG 333
Query: 151 ----HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYV 204
+ +L ++H GSS+ SGHY C TS+ ++ D+RV + ++V N AY+
Sbjct: 334 SYDGDVKYSLYGVLVHAGSSTHSGHYYCYVRTSNNMWYTLDDNRVSHVSEREVLNQQAYM 393
Query: 205 VIY 207
+ Y
Sbjct: 394 LFY 396
>gi|393216033|gb|EJD01524.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
Length = 775
Score = 94.4 bits (233), Expect = 4e-17, Method: Composition-based stats.
Identities = 75/254 (29%), Positives = 107/254 (42%), Gaps = 49/254 (19%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL-------------- 56
+ G A P I L IA H R ED+HEFL Y I+ + +S L
Sbjct: 236 KKGRAFTPLPITRNLNSIAKHLRKGRQEDAHEFLRYAIDSLQKSCLAGYPPKIDHKLAET 295
Query: 57 ----KVISGS------------------NNLELSLDIYQLSSLDEALGQFFAKEYLVRDN 94
K+ G + L+LS+DIY +S L EAL +F AK+YL +
Sbjct: 296 TWVHKIFGGQLRSRVTCQQCGYNSDTFDSILDLSIDIYNISGLKEALKKFTAKDYLKGAD 355
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMHCRR 154
Y+CEKC A KQF+I + P V + LKRF + K+ ++ L M +
Sbjct: 356 KYKCEKCKRPVNAEKQFTIHEAPAVLTVHLKRFTPMGRKLQHPIRYDEVLSLQPAMSEGQ 415
Query: 155 N-----LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDD---RVQASNLQQVTNAYVVI 206
+ L + H G SGHY G ++ DD RV + NAY++
Sbjct: 416 HGPTYKLYGVISHMGGGPNSGHYFAHVRGGDGQWYEMNDDSVERVHKPEPLNMKNAYMLF 475
Query: 207 Y-----ELLPSSLH 215
Y E L +++H
Sbjct: 476 YIRQKGEALAAAVH 489
>gi|169861600|ref|XP_001837434.1| Usp36 protein [Coprinopsis cinerea okayama7#130]
gi|116501455|gb|EAU84350.1| Usp36 protein [Coprinopsis cinerea okayama7#130]
Length = 637
Score = 94.4 bits (233), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 105/248 (42%), Gaps = 43/248 (17%)
Query: 3 KTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------ 56
+ +AA S S P I +L+ IA H R ED+HEFL Y I+ + +S L
Sbjct: 171 RQVAAKSFSSRSPFAPSQITGRLQTIAKHMRKGRQEDTHEFLRYAIDALQKSCLAGYPPK 230
Query: 57 ------------KVISG------------------SNNLELSLDIYQLSSLDEALGQFFA 86
K+ G L+LSLDI + ++ +AL +F A
Sbjct: 231 IDQKLAETTWVHKIFGGRLRSRVTCRDCGYNSDTFDRILDLSLDILKSDTIKDALRKFVA 290
Query: 87 KEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEF 146
+YL + Y+CEKC A K+F+I P+V + LKRF+ L KI V +L
Sbjct: 291 IDYLKGADKYKCEKCKKPVTAEKRFTIHDAPLVLTVHLKRFSPLGRKIGHPVTYDDHLSL 350
Query: 147 GKFMH-----CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVT- 200
FM +L + H G SGHY + G + D+ V N ++
Sbjct: 351 QPFMSEGSFGPTYSLYGVICHAGGGPHSGHYYAFVKSRDGKWWEMNDEMVSPINGPPLSK 410
Query: 201 -NAYVVIY 207
+AYV+ Y
Sbjct: 411 KSAYVLFY 418
>gi|336373694|gb|EGO02032.1| hypothetical protein SERLA73DRAFT_49755 [Serpula lacrymans var.
lacrymans S7.3]
Length = 337
Score = 94.0 bits (232), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 71/236 (30%), Positives = 106/236 (44%), Gaps = 43/236 (18%)
Query: 15 AIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------------ 56
A +P I KL+ IA H + R EDSHEFL Y I+ + +S L
Sbjct: 100 AFVPYPITTKLQTIAKHMKRGRQEDSHEFLRYAIDALQKSCLAGYPPKLDPKVAETTWVH 159
Query: 57 KVISG------------------SNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQC 98
++ G + L+LSLDIY ++S+ EAL +F A +YL + Y+C
Sbjct: 160 RIFGGHLRSRVTCRECQHNSDTFDSILDLSLDIYGVASIKEALRKFVAVDYLKGSDKYKC 219
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMHCRR---- 154
EKC A K+F++ P+V + LKRF+ L KI V+ L M +
Sbjct: 220 EKCKKAVIAEKRFTVHDAPVVLTVHLKRFSPLGRKIGHYVKYDDRLGLQPIMSEGQFGPS 279
Query: 155 -NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV--QASNLQQVTNAYVVIY 207
+L + H G SGHY +G ++ D V Q ++ + NAY++ Y
Sbjct: 280 YSLYGVICHAGGGPNSGHYYAHVKGGNGQWYEMNDGMVSSQRNSPVGMKNAYMLFY 335
>gi|9758368|dbj|BAB08869.1| unnamed protein product [Arabidopsis thaliana]
Length = 829
Score = 93.6 bits (231), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 70/229 (30%), Positives = 115/229 (50%), Gaps = 28/229 (12%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
++K + + +G + P+ +++ L+ I+ +F R ED+HE+++ L+E +H+ L
Sbjct: 155 IQKHVRTARQANGRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHKCSLP--- 211
Query: 61 GSNNLELSLDIYQLSSL----------DEALGQFFAKEYLVRDN---LYQCEKCGYKTEA 107
S S D Y+ S + AL +F A E L DN +YQCE+C K +A
Sbjct: 212 -SGVPSESSDAYRRSLVHKIFGGSLRSQRALSRFTAVELL--DNGAKVYQCERCKQKVKA 268
Query: 108 TKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFM------HCRRNLVSAV 160
KQ ++ K P V + LKRF + KI V ++ F+ + + L +
Sbjct: 269 KKQLTVSKAPYVLTVHLKRFEAHRSEKIDRKVDFTSAIDMKPFVSGPHEGNLKYTLYGVL 328
Query: 161 IHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
+H+G SS SGHY C TSSG ++ D+RV + + V N AY++ Y
Sbjct: 329 VHYGRSSHSGHYACFVRTSSGMWYSLDDNRVVQVSEKTVFNQKAYMLFY 377
>gi|302142802|emb|CBI20097.3| unnamed protein product [Vitis vinifera]
Length = 915
Score = 93.2 bits (230), Expect = 8e-17, Method: Composition-based stats.
Identities = 70/254 (27%), Positives = 122/254 (48%), Gaps = 47/254 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
++K ++ +G ++P+ +++ L+ I+ +F R ED+HE++++L+E +H+ L
Sbjct: 156 IQKHVSRALQSTGRILVPKDLVSNLRCISRNFRNARQEDAHEYMVHLLETMHKCCLPSGV 215
Query: 57 --------------KVISG--------------SNN----LELSLDIYQLSSLDEALGQF 84
K+ G SN L+LSL+I++ SL +AL F
Sbjct: 216 PSESPSAYEKSLVHKIFGGLLRSQVKCMQCSYCSNKFDPFLDLSLEIFKADSLHKALVHF 275
Query: 85 FAKEYLVR-DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL--CLKISCAVQVP 141
A E L + YQC++C K +A KQ ++ K P V + LKRF KI V
Sbjct: 276 TATEQLDGGERQYQCQRCKQKVKALKQLTVHKAPYVLTIHLKRFGAHDPGQKIDKKVHFG 335
Query: 142 LYLEFGKFM------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
++ F+ + + L ++H G S+ SGHY C TS+G ++ D+RV +
Sbjct: 336 PTMDLKPFVSGSYEENLKYTLYGVLVHAGWSTHSGHYYCFVRTSTGMWYSLDDNRVVQVS 395
Query: 196 LQQVTN--AYVVIY 207
+ V + AY++ Y
Sbjct: 396 ERTVLDQKAYMLFY 409
>gi|225461822|ref|XP_002283705.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Vitis
vinifera]
Length = 955
Score = 93.2 bits (230), Expect = 8e-17, Method: Composition-based stats.
Identities = 70/254 (27%), Positives = 122/254 (48%), Gaps = 47/254 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
++K ++ +G ++P+ +++ L+ I+ +F R ED+HE++++L+E +H+ L
Sbjct: 156 IQKHVSRALQSTGRILVPKDLVSNLRCISRNFRNARQEDAHEYMVHLLETMHKCCLPSGV 215
Query: 57 --------------KVISG--------------SNN----LELSLDIYQLSSLDEALGQF 84
K+ G SN L+LSL+I++ SL +AL F
Sbjct: 216 PSESPSAYEKSLVHKIFGGLLRSQVKCMQCSYCSNKFDPFLDLSLEIFKADSLHKALVHF 275
Query: 85 FAKEYLVR-DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL--CLKISCAVQVP 141
A E L + YQC++C K +A KQ ++ K P V + LKRF KI V
Sbjct: 276 TATEQLDGGERQYQCQRCKQKVKALKQLTVHKAPYVLTIHLKRFGAHDPGQKIDKKVHFG 335
Query: 142 LYLEFGKFM------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
++ F+ + + L ++H G S+ SGHY C TS+G ++ D+RV +
Sbjct: 336 PTMDLKPFVSGSYEENLKYTLYGVLVHAGWSTHSGHYYCFVRTSTGMWYSLDDNRVVQVS 395
Query: 196 LQQVTN--AYVVIY 207
+ V + AY++ Y
Sbjct: 396 ERTVLDQKAYMLFY 409
>gi|449679016|ref|XP_002157785.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like, partial
[Hydra magnipapillata]
Length = 372
Score = 93.2 bits (230), Expect = 9e-17, Method: Compositional matrix adjust.
Identities = 70/210 (33%), Positives = 96/210 (45%), Gaps = 44/210 (20%)
Query: 9 QAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRS-------------- 54
+ + AI P II KL+ I F + R ED+HEFL Y++EGI +S
Sbjct: 157 RGNTNGAIKPMSIIQKLQFIGKSFRFGRQEDAHEFLRYVVEGIQKSDYVGKPNLDKFSKE 216
Query: 55 -----------------YLKVISGSNNLE----LSLDIYQLSSLDEALGQFFAKEYLVRD 93
LK SN E ++LD+ S++ +AL + + L D
Sbjct: 217 TSVANAIFGGLYRSQVKCLKCNFDSNTFETMMDINLDVKDCSTVIQALQRSVCADRLEGD 276
Query: 94 NLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL---KISCAVQVPLYLEFGKFM 150
N Y CE+C KT A K+ SI K P V L LKRF++ + KIS V P L+ FM
Sbjct: 277 NKYYCERCRMKTVAQKRNSIYKEPNVLTLQLKRFDFTNMFGGKISKNVVFPEELDIRPFM 336
Query: 151 HCRRN------LVSAVIHHGSSSFSGHYNC 174
+N L + ++H G S SGHY C
Sbjct: 337 SVAQNYPLLYKLYAVLVHSGFSCNSGHYYC 366
>gi|342321481|gb|EGU13414.1| Ubiquitin carboxyl-terminal hydrolase [Rhodotorula glutinis ATCC
204091]
Length = 656
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 105/234 (44%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH------------------------- 52
P ++ LK IA H R EDSHEFL + I+ +
Sbjct: 203 PNPVVRNLKKIAKHMRLGRQEDSHEFLRFSIDAMQAAALYGKSPKLEQKIKETTFVHQIF 262
Query: 53 ----RSYLKVISGSNN-------LELSLDI-YQLSSLDEALGQFFAKEYLVRDNLYQCEK 100
RS + ++ +N L+LSLD+ + ++L +AL F + L N Y+CEK
Sbjct: 263 GGRLRSRVHCLACGHNSDTFDSILDLSLDLGNRANTLKDALDNFVRIDKLSGQNKYKCEK 322
Query: 101 CGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMHCRR-----N 155
C A K F+IE P+V + LKRF+ KI+ ++ P L G +M +
Sbjct: 323 CKKLVNAEKYFAIEDAPLVLTVHLKRFSPTGRKITGQLRYPETLHLGPYMSNPKVDPSYR 382
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVT--NAYVVIY 207
L ++H G SGHY +SSG +H DD V + + ++ +AYV+ Y
Sbjct: 383 LYGIILHSGGGPHSGHYTSYVRSSSGKWHDMNDDYVSSLSHPPLSDRDAYVLFY 436
>gi|409049827|gb|EKM59304.1| hypothetical protein PHACADRAFT_88204 [Phanerochaete carnosa
HHB-10118-sp]
Length = 667
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 110/252 (43%), Gaps = 47/252 (18%)
Query: 3 KTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH---------- 52
+ LAA + A++P I L+ IA R EDSHEFL Y ++ +
Sbjct: 177 RELAADSFTAKHAMVPYTITRALQHIAKTMRRGRQEDSHEFLRYAVDALQKSCLAGQPQP 236
Query: 53 -----------------------RSYLKVISGSNN-------LELSLDIYQLSSLDEALG 82
RS +K +S +N L+LS+DI+ +S+L +AL
Sbjct: 237 QSRKVEPKLAETTWVHKIFGGRLRSRVKCLSCGHNSDTFDSMLDLSIDIFGVSNLRDALR 296
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAV---- 138
+F A + L N Y+CEKC A KQF++ P+V + LKRF+ + KI V
Sbjct: 297 KFVAVDQLRGQNKYKCEKCKKHVAADKQFTVHDAPMVLTIHLKRFSPMGRKIPHLVGYDE 356
Query: 139 QVPLYLEFGKFMHCRR-NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV--QASN 195
++ L + H L + H G SGHY ++G +H DD V Q+
Sbjct: 357 RISLQPVMSEGQHGPTYTLFGVISHAGGGPSSGHYYAHVKDAAGQWHEMNDDTVSRQSGA 416
Query: 196 LQQVTNAYVVIY 207
+ NAY++ Y
Sbjct: 417 PLGMKNAYILFY 428
>gi|357133052|ref|XP_003568142.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like
[Brachypodium distachyon]
Length = 641
Score = 92.8 bits (229), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 80/282 (28%), Positives = 119/282 (42%), Gaps = 58/282 (20%)
Query: 2 RKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV--- 58
R+ + +AE+G+ P II L L A HF + R ED+HEFL Y+I+ H + L+V
Sbjct: 77 RQIVRMLRAEAGALDSPGKIIRCLPLFAEHFRWGRQEDAHEFLRYVIDACHTACLRVRKR 136
Query: 59 ----------------------------------------ISGSNN-----LELSLDIYQ 73
G +N +++SLD+
Sbjct: 137 LPAASANGDCGQEEGRGQGNCMLMRETFGGALLSQVKCLVCKGESNKTDEIMDISLDLLG 196
Query: 74 LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-CL 132
SS+ +AL FF E L N Y CE+C T A KQ I + P V ++ LKRF +
Sbjct: 197 SSSVGDALACFFRPELLEGANKYSCERCKKLTSARKQMFILRAPKVLVIQLKRFEGINGG 256
Query: 133 KISCAVQVPLYLEFGKFMHCRR-------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
KI+ + L FM+ + NL ++++H G S SGHY S G ++
Sbjct: 257 KINRNIGFKESLILSDFMYNKNQDSQPVYNLFASIVHSGFSPESGHYYAYVKDSIGRWYC 316
Query: 186 FGDDRVQASNLQQV--TNAYVVIYELLPSSLHHLNSSLHSSS 225
D V S+ Q V Y++ Y L + H + SS+
Sbjct: 317 CNDSHVSLSSSQDVLSEKVYILFYILSSKTQKHCTNGYSSSA 358
>gi|29367503|gb|AAO72607.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
Length = 842
Score = 92.0 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 75/245 (30%), Positives = 115/245 (46%), Gaps = 51/245 (20%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL--------------- 56
+G + P I+ L+ I+ F R ED+HE ++ L+E +H+ L
Sbjct: 61 TGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAYEKS 120
Query: 57 ---KVISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVR-DN 94
K+ G SN L+LSLDI + +SL AL F A+E L +
Sbjct: 121 LVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEELLDGGEK 180
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC--LKISCAVQVPLYLEFGKFM-- 150
YQC++C K A K+F+I+K P V + LKRF+ KI V L+ F+
Sbjct: 181 QYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDLKPFISD 240
Query: 151 ----HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV----QASNLQQVTNA 202
+ + +L ++H G ++ SGHY C TSSG +H D++V +A L+Q A
Sbjct: 241 SKVSNLKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQ--KA 298
Query: 203 YVVIY 207
Y++ Y
Sbjct: 299 YMLFY 303
>gi|357143373|ref|XP_003572898.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like
[Brachypodium distachyon]
Length = 1051
Score = 92.0 bits (227), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 114/246 (46%), Gaps = 53/246 (21%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH------------------- 52
+G + P + L+ I+ F YR ED+HE ++ L+E +H
Sbjct: 141 TGKILTPMQFVKNLRCISRSFRNYRQEDAHELMVNLLESMHKCCLPSGMPSQSPSAYEKS 200
Query: 53 ----------RSYLKVISGSNN-------LELSLDIYQLSSLDEALGQFFAKEYLVRDN- 94
RS +K +S S+ L+LSL+I ++L +AL Q F +E L+ D
Sbjct: 201 LVHRIFGGRLRSQVKCVSCSHCSSKFDPFLDLSLEIANAATLVKAL-QNFTEEELLDDGE 259
Query: 95 -LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL--KISCAVQVPLYLEFGKF-- 149
Y C+ C K A K+F+I+K P V + LKRF+ KI V L+ F
Sbjct: 260 KQYNCQHCRQKVAAKKRFTIDKAPDVLTIHLKRFSPFNPRHKIDKKVDFQPTLDLKPFVS 319
Query: 150 ----MHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV----QASNLQQVTN 201
M R NL ++H G ++ +GHY C TSSG +H D++V +A L+Q
Sbjct: 320 NSEDMDFRYNLYGVLVHAGWNTQAGHYYCFVRTSSGMWHNLDDNQVHQVREADVLRQ--K 377
Query: 202 AYVVIY 207
AY++ Y
Sbjct: 378 AYMLFY 383
>gi|55773913|dbj|BAD72518.1| putative ubiquitin-specific protease 23 [Oryza sativa Japonica
Group]
Length = 874
Score = 92.0 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 75/245 (30%), Positives = 114/245 (46%), Gaps = 51/245 (20%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL--------------- 56
+G + P I+ L+ I+ F R ED+HE ++ L+E +H+ L
Sbjct: 118 TGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAYEKS 177
Query: 57 ---KVISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVR-DN 94
K+ G SN L+LSLDI + +SL AL F A+E L +
Sbjct: 178 LVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEELLDGGEK 237
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC--LKISCAVQVPLYLEFGKFMH- 151
YQC++C K A K+F+I+K P V + LKRF+ KI V L+ F+
Sbjct: 238 QYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDLKPFISD 297
Query: 152 -----CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV----QASNLQQVTNA 202
+ +L ++H G ++ SGHY C TSSG +H D++V +A L+Q A
Sbjct: 298 SKGADFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQ--KA 355
Query: 203 YVVIY 207
Y++ Y
Sbjct: 356 YMLFY 360
>gi|218197715|gb|EEC80142.1| hypothetical protein OsI_21934 [Oryza sativa Indica Group]
Length = 940
Score = 92.0 bits (227), Expect = 2e-16, Method: Composition-based stats.
Identities = 75/245 (30%), Positives = 114/245 (46%), Gaps = 51/245 (20%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL--------------- 56
+G + P I+ L+ I+ F R ED+HE ++ L+E +H+ L
Sbjct: 159 TGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAYEKS 218
Query: 57 ---KVISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVR-DN 94
K+ G SN L+LSLDI + +SL AL F A+E L +
Sbjct: 219 LVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEELLDGGEK 278
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC--LKISCAVQVPLYLEFGKFMH- 151
YQC++C K A K+F+I+K P V + LKRF+ KI V L+ F+
Sbjct: 279 QYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDLKPFISD 338
Query: 152 -----CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV----QASNLQQVTNA 202
+ +L ++H G ++ SGHY C TSSG +H D++V +A L+Q A
Sbjct: 339 SKGADFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQ--KA 396
Query: 203 YVVIY 207
Y++ Y
Sbjct: 397 YMLFY 401
>gi|115466786|ref|NP_001056992.1| Os06g0184300 [Oryza sativa Japonica Group]
gi|55773912|dbj|BAD72517.1| putative ubiquitin-specific protease 23 [Oryza sativa Japonica
Group]
gi|113595032|dbj|BAF18906.1| Os06g0184300 [Oryza sativa Japonica Group]
Length = 899
Score = 91.7 bits (226), Expect = 2e-16, Method: Composition-based stats.
Identities = 75/245 (30%), Positives = 114/245 (46%), Gaps = 51/245 (20%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL--------------- 56
+G + P I+ L+ I+ F R ED+HE ++ L+E +H+ L
Sbjct: 118 TGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAYEKS 177
Query: 57 ---KVISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVR-DN 94
K+ G SN L+LSLDI + +SL AL F A+E L +
Sbjct: 178 LVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEELLDGGEK 237
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC--LKISCAVQVPLYLEFGKFMH- 151
YQC++C K A K+F+I+K P V + LKRF+ KI V L+ F+
Sbjct: 238 QYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDLKPFISD 297
Query: 152 -----CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV----QASNLQQVTNA 202
+ +L ++H G ++ SGHY C TSSG +H D++V +A L+Q A
Sbjct: 298 SKGADFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQ--KA 355
Query: 203 YVVIY 207
Y++ Y
Sbjct: 356 YMLFY 360
>gi|222635089|gb|EEE65221.1| hypothetical protein OsJ_20367 [Oryza sativa Japonica Group]
Length = 940
Score = 91.3 bits (225), Expect = 3e-16, Method: Composition-based stats.
Identities = 75/245 (30%), Positives = 114/245 (46%), Gaps = 51/245 (20%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL--------------- 56
+G + P I+ L+ I+ F R ED+HE ++ L+E +H+ L
Sbjct: 159 TGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAYEKS 218
Query: 57 ---KVISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVR-DN 94
K+ G SN L+LSLDI + +SL AL F A+E L +
Sbjct: 219 LVHKIFGGRLRSQVKCTQCSHCSNKFDPFLDLSLDIGKATSLVRALQNFTAEELLDGGEK 278
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC--LKISCAVQVPLYLEFGKFMH- 151
YQC++C K A K+F+I+K P V + LKRF+ KI V L+ F+
Sbjct: 279 QYQCQRCRKKVVAKKKFTIDKAPYVLTIHLKRFSPFNPREKIDKKVDFQPMLDLKPFISD 338
Query: 152 -----CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV----QASNLQQVTNA 202
+ +L ++H G ++ SGHY C TSSG +H D++V +A L+Q A
Sbjct: 339 SKGADFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGMWHNLDDNQVRQVREADVLRQ--KA 396
Query: 203 YVVIY 207
Y++ Y
Sbjct: 397 YMLFY 401
>gi|170091622|ref|XP_001877033.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164648526|gb|EDR12769.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 312
Score = 90.9 bits (224), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 105/240 (43%), Gaps = 45/240 (18%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL--------------- 56
S ++P I N+L+ IA H R ED+HEFL Y I+ + +S L
Sbjct: 72 SKGPVVPSSITNRLQTIAKHMRKGRQEDTHEFLRYAIDALQKSCLAGHSPKIDPKIAETT 131
Query: 57 ---KVISG------------------SNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNL 95
KV G + L+LSLDI++ SL +AL F A +YL +
Sbjct: 132 WVHKVFGGRLRSRVTCRDCGHNSDTFDSILDLSLDIHKSESLRDALRTFVAIDYLRGADK 191
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMHCRR- 154
Y+CEKC A K+F+I + P+V + KRF+ + KI + +L FM +
Sbjct: 192 YKCEKCKKHVVAEKRFTIHEAPLVLTVHFKRFSPMGRKIGHHINFEEHLSLKPFMSEGQH 251
Query: 155 ----NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDD---RVQASNLQQVTNAYVVIY 207
+L + H G SGHY G + D+ RV ++ + T AY++ Y
Sbjct: 252 GPSYSLYGIICHAGGGPNSGHYYAFVKAKDGQWWEMNDEMRSRVGSAPTNKKT-AYMLFY 310
>gi|428166280|gb|EKX35258.1| hypothetical protein GUITHDRAFT_79938, partial [Guillardia theta
CCMP2712]
Length = 347
Score = 90.5 bits (223), Expect = 5e-16, Method: Compositional matrix adjust.
Identities = 70/240 (29%), Positives = 102/240 (42%), Gaps = 50/240 (20%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH------------------------- 52
P I+N + I R ED+HEF L+E +H
Sbjct: 105 PSNIVNSFRKIGARLRLGRQEDAHEFTRLLMEAMHLADLAACRFTESPYSRAAQTGLVHG 164
Query: 53 ------RSYLKVISGSNN-------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCE 99
RS ++ + N L+LSL+I + ++ +AL F E L +N Y+C
Sbjct: 165 IFGGHLRSQVRCETCRYNSNTYDAFLDLSLEIKKADNITDALRLFTKPEILDGNNKYKCS 224
Query: 100 KCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISC----------AVQVPLYLEFGKF 149
CG KT ATK+FS+ + P+V L LKRF SC +Q+ Y+ G+
Sbjct: 225 HCGCKTRATKRFSVHRAPLVLQLHLKRFETSWSGNSCKLSKHVMFEQTLQLDPYMSEGEK 284
Query: 150 MHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVT--NAYVVIY 207
R NL V+H G S SGHY S+G ++ DD V+ + V AY++ Y
Sbjct: 285 AGSRYNLYGVVVHSGHSMKSGHYYAFVKNSNGVWYEMDDDSVRQVSYSAVARQQAYMLFY 344
>gi|359495422|ref|XP_003634989.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 23-like [Vitis
vinifera]
Length = 997
Score = 90.5 bits (223), Expect = 5e-16, Method: Composition-based stats.
Identities = 70/254 (27%), Positives = 120/254 (47%), Gaps = 47/254 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
++K ++ +G + P+ +++ L+ I+ +F R ED+HE+++ L+E +H+ L
Sbjct: 155 IQKHVSRALQSTGRILAPKDLVSNLRCISRNFRNARQEDAHEYMVNLLETMHKCCLPSGV 214
Query: 57 --------------KVISG--------------SNN----LELSLDIYQLSSLDEALGQF 84
K+ G SN L+LSL+I++ SL +AL F
Sbjct: 215 PSESPSAYEKSLVHKIFGGLLRSQVKCMQCSYCSNKFDPFLDLSLEIFKADSLHKALMHF 274
Query: 85 FAKEYLVR-DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL--CLKISCAVQVP 141
A E L + YQC++C K +A KQ ++ K P V + LKRF KI V
Sbjct: 275 TATEQLDGGERQYQCQRCKQKVKALKQLTVHKAPYVLTIHLKRFGAHDPGQKIDKKVHFG 334
Query: 142 LYLEFGKFM------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
++ F+ + + L ++H G S+ SGHY C TS+G ++ D+RV +
Sbjct: 335 PTMDLKPFVSGSYEENLKYTLYGVLVHAGWSTHSGHYYCFVRTSTGMWYSLDDNRVVQVS 394
Query: 196 LQQVTN--AYVVIY 207
+ V + AY++ Y
Sbjct: 395 ERTVLDQKAYMLFY 408
>gi|393246455|gb|EJD53964.1| cysteine proteinase [Auricularia delicata TFB-10046 SS5]
Length = 662
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 75/272 (27%), Positives = 113/272 (41%), Gaps = 47/272 (17%)
Query: 13 GSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---------------- 56
G+A P I++ L IA R ED+HEFL +LI+ + ++ L
Sbjct: 168 GNAFSPSPILHNLHKIAKSLRRGRQEDAHEFLRFLIDAMQKACLHGQPKKVDPAVAEATW 227
Query: 57 --KVISG------------------SNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLY 96
+V G + L+LSLDI SS+ +AL F A ++L + Y
Sbjct: 228 VSRVFGGKLRSRVRCCSCNHPSDTFDSILDLSLDIQNASSVHQALKHFVAIDHLRGADKY 287
Query: 97 QCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFM------ 150
+CEKC A KQF+I+ P+ + LKRF K++ VQ +L M
Sbjct: 288 KCEKCKKPVNAEKQFTIDSAPLALTVHLKRFTPFGRKLAHVVQYKEHLSLAGAMSKDAKE 347
Query: 151 -HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV--QASNLQQVTNAYVVIY 207
+ L + H GS SGHY +G ++ DD V Q + +AY++ Y
Sbjct: 348 QSPQYKLYGVICHAGSGPNSGHYYAFTKGPNGRWYEMNDDAVSLQTRPPLDLKSAYMLFY 407
Query: 208 ELLPSSLHHLNSSLHSSSPGSVEPRTHHRNYM 239
L LN + + + G R+ R M
Sbjct: 408 --LRDEASALNDIIATDAKGKGPDRSVRRKSM 437
>gi|353234548|emb|CCA66572.1| related to ubiquitin carboxyl-terminal hydrolase 36 [Piriformospora
indica DSM 11827]
Length = 701
Score = 90.1 bits (222), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 71/255 (27%), Positives = 107/255 (41%), Gaps = 42/255 (16%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH------------------ 52
+S A PE I LK I+ YR ED+HEFL + I+ +
Sbjct: 196 KSRQARSPEDIFRNLKRISPTLRQYRQEDAHEFLRFSIDALQLSAQNGVKSVPEKLAATS 255
Query: 53 ----------RSYLKVISGSNN-------LELSLDIYQLSSLDEALGQFFAKEYLVRDNL 95
RS + S +N L+LS+DI + +L +AL F A E L N
Sbjct: 256 WVYRLFGGQFRSRVTCGSCGHNSDTFDTLLDLSVDIAKCDTLKQALRMFSAIERLEGSNK 315
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMHCRRN 155
Y+CEKC A KQ ++ K P+ + LKRF+ KI+ + P L + + +
Sbjct: 316 YKCEKCKKPVNAKKQITVHKAPMALCIQLKRFSPWGRKITNMIDYPETLSLNEILSDNQT 375
Query: 156 -----LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIYE 208
L ++H GS SGHY +G + DD V + NAY++ Y
Sbjct: 376 SPMYQLYGVIVHAGSGPNSGHYYTFVKNYAGKWLRINDDEVDTIPRAPLGSKNAYMLFYM 435
Query: 209 LLPSSLHHLNSSLHS 223
P +++ + +S S
Sbjct: 436 RRPFNINDVVASTSS 450
>gi|357480083|ref|XP_003610327.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355511382|gb|AES92524.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 855
Score = 89.7 bits (221), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 74/248 (29%), Positives = 116/248 (46%), Gaps = 48/248 (19%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---------- 56
A QA +G + P+ ++ L+ I+ +F R ED+HE+++ L+E +H+ L
Sbjct: 147 ALQA-TGRIVSPQDMVGNLRCISRNFRKARQEDAHEYMVNLLESMHKCCLPSGVPSESPG 205
Query: 57 --------KVISG-------------SNN-----LELSLDIYQLSSLDEALGQFFAKEYL 90
K+ G S+N L+LSL+I + SL +AL F A E L
Sbjct: 206 AFEKSLVHKIFGGRLRSQVKCRQCSYSSNKFDPFLDLSLEILKADSLQKALANFTAAELL 265
Query: 91 VR-DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF--NYLCLKISCAVQVPLYLEFG 147
+ Y C++C K +A KQ +I K P V + LKRF + +KI V+ L
Sbjct: 266 DGGEKQYHCQRCKQKVQAVKQLTIHKAPYVLAIHLKRFYAHDPNIKIKKKVRFDSALNLK 325
Query: 148 KFM------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN 201
F+ + +L ++H G S+ SGHY C TS+ ++ D RV Q+V N
Sbjct: 326 PFVSGSSDGDVKYSLYGVLVHSGFSTHSGHYYCYVRTSNNMWYTLDDTRVSHVGEQEVLN 385
Query: 202 --AYVVIY 207
AY++ Y
Sbjct: 386 QQAYMLFY 393
>gi|384252944|gb|EIE26419.1| cysteine proteinase [Coccomyxa subellipsoidea C-169]
Length = 840
Score = 89.7 bits (221), Expect = 1e-15, Method: Composition-based stats.
Identities = 69/222 (31%), Positives = 99/222 (44%), Gaps = 32/222 (14%)
Query: 16 IIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS--------------G 61
I P N L+ I F R ED+HE+L+ L++ +H + L +
Sbjct: 101 ISPRPHANGLRRICRSFRRGRQEDAHEYLVALLDAMHEAALAGYNPKPSREVKCCECGYE 160
Query: 62 SNNLE----LSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPP 117
SN +E + LDI + SL AL ++ E L R+N Y+C K G A K +IE+ P
Sbjct: 161 SNTMESFMDICLDIGRAGSLAHALERYTKPEMLDRENKYKCPKQGRLVRARKTITIERVP 220
Query: 118 IVFILLLKRFNYLCL--KISCAVQVPLYLEFGKFMHCRR------NLVSAVIHHGSSSFS 169
V + LKRF Y KI V +L+ +M RR L ++H G S S
Sbjct: 221 NVLVFQLKRFEYSMYGSKIGKKVDFYTHLDMAPYMSNRRAGPQMYELFGVLVHAGHSVHS 280
Query: 170 GHYNCIGSTSSGSYHYFGDDRVQASNLQQVT----NAYVVIY 207
GHY C +G +H D VQ S + + AY++ Y
Sbjct: 281 GHYFCFVRAPNGLWHRMDD--VQVSQVSERVVLGQKAYILFY 320
>gi|156359561|ref|XP_001624836.1| predicted protein [Nematostella vectensis]
gi|156211638|gb|EDO32736.1| predicted protein [Nematostella vectensis]
Length = 406
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 72/253 (28%), Positives = 107/253 (42%), Gaps = 47/253 (18%)
Query: 2 RKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL----- 56
R L + +I P II +L+ IA H + ED+HEFL Y+I+G+ +S L
Sbjct: 141 RHILRTFNHQQNESIKPLCIIQRLRSIAKHLRFGHQEDAHEFLRYVIDGMQKSCLAGQPE 200
Query: 57 ---------------------------KVISGSNN----LELSLDIYQLSSLDEALGQFF 85
K + SN +E+ +DI S+ A+ +
Sbjct: 201 KMDRYSKETTIVHGIFGGYYRSQVQCLKCHNTSNTFDPLMEIMVDIKHSPSVVRAIQRMC 260
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCLKISCAVQVPL 142
E L DNLYQC +C K A KQ I +PP + + LKRF+Y K+S +
Sbjct: 261 KAELLDGDNLYQCPRCKKKVPAHKQVLIHRPPNILTIQLKRFDYHHMFGGKVSKEITYTE 320
Query: 143 YLEFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNL 196
+L+ FM + L ++H G S SGHY C S+ ++ D V+ L
Sbjct: 321 HLDLRPFMTNPKGPPLKYKLYGVLVHSGYSCNSGHYYCYVRGSNDCWYNMNDSMVRQVGL 380
Query: 197 QQV--TNAYVVIY 207
V AY++ Y
Sbjct: 381 NTVLAQQAYLLFY 393
>gi|328854662|gb|EGG03793.1| hypothetical protein MELLADRAFT_78495 [Melampsora larici-populina
98AG31]
Length = 717
Score = 89.4 bits (220), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 78/268 (29%), Positives = 116/268 (43%), Gaps = 48/268 (17%)
Query: 1 MRKTLAACQAESGSA--IIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEG-------- 50
MR ++ C + +A I P I N L IA R ED+HEFL LIE
Sbjct: 280 MRNLISMCLEPNKTARVIEPTPITNSLTKIAPRMRGGRQEDAHEFLRLLIEAMQNGALGG 339
Query: 51 --------------IHRSYLKVI---------SGSNN-----LELSLDIYQLSSLDEALG 82
IHR + G+++ L+LSLDI + +++ AL
Sbjct: 340 QEAQAKQKDKEATFIHRMFAGKFRSRVTCQHCEGTSDTFDTFLDLSLDIGEANNVPNALR 399
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
+ + L N Y+CEKC +A K+ S+ + P + L +KRFN+ KI+ +Q
Sbjct: 400 KLRKLDLLKGANQYKCEKCKRLRDAKKELSVHEAPPILTLHIKRFNFRGKKINKRIQFSD 459
Query: 143 YLEFGKFM-----HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGD---DRVQAS 194
L+ M H R NL + V H G S+ SGHY TS ++ D DRV
Sbjct: 460 SLDLNAAMDKDAPHTRYNLYAVVCHQGPSNTSGHYYSYIKTSDRQWYRADDCSIDRVDRG 519
Query: 195 NLQQVTNAYVVIYELLPSSLHHLNSSLH 222
+ + AY+ Y P L++++H
Sbjct: 520 QVFRNDEAYIFFYSRDPEDF--LDAAIH 545
>gi|296088835|emb|CBI38293.3| unnamed protein product [Vitis vinifera]
Length = 520
Score = 89.0 bits (219), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 115/243 (47%), Gaps = 47/243 (19%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL--------------- 56
+G + P+ +++ L+ I+ +F R ED+HE+++ L+E +H+ L
Sbjct: 166 TGRILAPKDLVSNLRCISRNFRNARQEDAHEYMVNLLETMHKCCLPSGVPSESPSAYEKS 225
Query: 57 ---KVISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYL-VRDN 94
K+ G SN L+LSL+I++ SL +AL F A E L +
Sbjct: 226 LVHKIFGGLLRSQVKCMQCSYCSNKFDPFLDLSLEIFKADSLHKALMHFTATEQLDGGER 285
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY--LCLKISCAVQVPLYLEFGKFM-- 150
YQC++C K +A KQ ++ K P V + LKRF KI V ++ F+
Sbjct: 286 QYQCQRCKQKVKALKQLTVHKAPYVLTIHLKRFGAHDPGQKIDKKVHFGPTMDLKPFVSG 345
Query: 151 ----HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYV 204
+ + L ++H G S+ SGHY C TS+G ++ D+RV + + V + AY+
Sbjct: 346 SYEENLKYTLYGVLVHAGWSTHSGHYYCFVRTSTGMWYSLDDNRVVQVSERTVLDQKAYM 405
Query: 205 VIY 207
+ Y
Sbjct: 406 LFY 408
>gi|218191741|gb|EEC74168.1| hypothetical protein OsI_09271 [Oryza sativa Indica Group]
Length = 1156
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 76/245 (31%), Positives = 113/245 (46%), Gaps = 51/245 (20%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK--VISGSNN----- 64
+G + P I+ L+ I+ F R ED+HE ++ L+E +H+ L V SGS +
Sbjct: 144 TGKILRPVHIVRNLRCISRSFRISRQEDAHELMVRLLESMHKCCLPSGVPSGSPSAYEKS 203
Query: 65 -----------------------------LELSLDIYQLSSLDEALGQFFAKEYLVR-DN 94
L+LSL+I ++L +AL F A+E L +
Sbjct: 204 LVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEIANAATLVKALQHFTAEELLDGGEK 263
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL--CLKISCAVQ------VPLYLEF 146
Y CE C K A K+F IEK P V + LKRF+ C KI VQ + Y+
Sbjct: 264 QYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPFNPCHKIDKKVQFQPTLNLKPYVSN 323
Query: 147 GKFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV----QASNLQQVTNA 202
+ M + +L ++H G ++ SGHY C TSSG +H D+ V +A L+Q A
Sbjct: 324 PEGMEFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGIWHNLDDNEVYQVREADVLRQ--KA 381
Query: 203 YVVIY 207
Y++ Y
Sbjct: 382 YMLFY 386
>gi|320165971|gb|EFW42870.1| DUB1 [Capsaspora owczarzaki ATCC 30864]
Length = 495
Score = 89.0 bits (219), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 71/231 (30%), Positives = 99/231 (42%), Gaps = 50/231 (21%)
Query: 16 IIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN----------- 64
I P+ II +L+ I F ED+HEFL L+E + +S LK G
Sbjct: 267 IAPKPIIRQLRKIGS-FRLGHQEDAHEFLRCLMESVQQSILKSFGGEKRIAHRVQETTLV 325
Query: 65 ---------------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQ 97
L+LSLDI +S+ +AL ++ E L + N Y
Sbjct: 326 HQMLGGYSNSRVHCTNCKANSDTYEAFLDLSLDIGNCASVADALAKYTVIERLEK-NAYN 384
Query: 98 CEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL---CLKISCAVQVPLYLEFGKFM---- 150
CEKC K ATKQ SI + P V L LKRF++L KI+ ++ L+ FM
Sbjct: 385 CEKCKRKVTATKQTSIHRAPNVLSLHLKRFDFLRSHNAKINRPIRFDEELDLSPFMSKGL 444
Query: 151 ---HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+ R L + ++H G S SGHY C S ++ D V N +Q
Sbjct: 445 PQQNLRYRLYAVLVHAGHSCHSGHYYCYVRNSDNQWYEMNDSHVSIKNKRQ 495
>gi|119575450|gb|EAW55048.1| ubiquitin specific peptidase 42, isoform CRA_b [Homo sapiens]
Length = 1176
Score = 88.6 bits (218), Expect = 2e-15, Method: Composition-based stats.
Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 52/253 (20%)
Query: 28 IAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLE--------------------- 66
IA HF + ED+HEFL Y ++ + ++ L +GSN L+
Sbjct: 149 IARHFRFGNQEDAHEFLQYTVDAMQKACL---NGSNKLDRHTQATTLVCQIFGGYLRSRV 205
Query: 67 -----------------LSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATK 109
++L+I S+++AL QF E L +N Y+C KC A+K
Sbjct: 206 KCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASK 265
Query: 110 QFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIH 162
+F+I + V L LKRF N+ KI+ V+ P YL+ +M L + ++H
Sbjct: 266 RFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIVYVLYAVLVH 325
Query: 163 HGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIYELLPSSLHHLNSS 220
G + +GHY C S+G ++ D V S+++ V + AYV+ Y + + +
Sbjct: 326 TGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY-IRSHDVKNGGEL 384
Query: 221 LHSS-SPGSVEPR 232
H + SPG PR
Sbjct: 385 THPTHSPGQSSPR 397
>gi|313234290|emb|CBY10357.1| unnamed protein product [Oikopleura dioica]
Length = 742
Score = 88.6 bits (218), Expect = 2e-15, Method: Composition-based stats.
Identities = 64/227 (28%), Positives = 103/227 (45%), Gaps = 42/227 (18%)
Query: 14 SAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV--------------- 58
SA P+ I+ L+ IA HF Y R E +HEF ++ + RS ++
Sbjct: 199 SASRPQEIVQNLRKIASHFSYGRQECAHEFTRLFMDALLRSCTRMNGKVDKYEETTTIPH 258
Query: 59 ----------ISGSNN----------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQC 98
+S SN L+++L++ SL + + F E L N+Y+C
Sbjct: 259 RVFGGWLRSRVSCSNCKHNSDTFESFLDINLEMKGCDSLQDCMRHFTMTEILDNGNMYKC 318
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC------LKISCAVQVPLYLEFGKFMHC 152
+KC T A K+F+I +PP V + LKRFN + ++ S + + Y + K M
Sbjct: 319 DKCKKATRAAKRFTIHRPPNVLAISLKRFNMMGNKNGREIRFSSKLDISKYCSYSK-MDN 377
Query: 153 RRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV 199
L + ++H G + SGHY TS G++ F D V ++L+ V
Sbjct: 378 NYELYAILVHAGFTVNSGHYYSYCRTSKGTWSRFDDSCVTPTSLENV 424
>gi|255086819|ref|XP_002509376.1| predicted protein [Micromonas sp. RCC299]
gi|226524654|gb|ACO70634.1| predicted protein [Micromonas sp. RCC299]
Length = 383
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/257 (27%), Positives = 114/257 (44%), Gaps = 57/257 (22%)
Query: 8 CQAESGS--AIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRS----------- 54
C+A +G + P + L+ I+ F R ED+HEF L++ +H
Sbjct: 122 CRALAGERRVVSPSAFVKNLRSISKTFRKGRQEDAHEFARCLLDAMHEKCVEHARPKPPK 181
Query: 55 ---------YLKVISG------------------SNNLELSLDIYQLSSLDEALGQFFAK 87
+V G + ++LSLDI + S++ AL ++ A
Sbjct: 182 NSPRAETTFVFQVFGGRLRSQVTCKTCGRKSDTFDSFMDLSLDIAKAKSVEAALKRYVAV 241
Query: 88 EYLVRDNLYQCEKCGYK---TEATKQFSIEKPPIVFILLLKRFNYLCL---KISCAVQVP 141
E L N Y+CE G K T ATKQF+I+ P+V + LKRF Y+ K++ V+ P
Sbjct: 242 EVLDGSNKYKCEMGGGKPHMTRATKQFTIDAAPLVLTVQLKRFEYVPFGRGKLTQFVEYP 301
Query: 142 LYLEFGKFMHC---------RRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQ 192
L+ M + +L + ++H G S SGHY C ++G ++ D+ V
Sbjct: 302 TSLDITGAMSDANPKARGVEKYSLFAVLVHAGGSMHSGHYYCYVKAATGVWYEMDDEGVS 361
Query: 193 ASNLQQVTN--AYVVIY 207
A++ + N AY++ Y
Sbjct: 362 ATSERTALNQKAYLLFY 378
>gi|449460062|ref|XP_004147765.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Cucumis
sativus]
gi|449519156|ref|XP_004166601.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Cucumis
sativus]
Length = 646
Score = 88.6 bits (218), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 70/233 (30%), Positives = 103/233 (44%), Gaps = 52/233 (22%)
Query: 25 LKLIAHHFEYYRPEDSHEFLLYLIEGIH-------------------------------- 52
L++ A HF R ED+HEFL Y+I+ H
Sbjct: 103 LRIFAEHFRLGRQEDAHEFLRYVIDACHNTCLRLKKLRRNGSYNGGATTGSSTVVKEIFG 162
Query: 53 ---RSYLKVISGSNN-------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
+S +K +S N+ +++SLD+ SSL EAL +FF E L N Y+C+ C
Sbjct: 163 GALQSQVKCLSCGNDSNKVDEIMDISLDVLHSSSLKEALQKFFQLEILDGSNKYKCDNCK 222
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYL-CLKISCAVQVPLYLEFGKFMHCRRN------ 155
A KQ SI + P + ++ LKRF + KI A+ L+ FM C+ +
Sbjct: 223 KLVVARKQMSILQAPNILVIQLKRFEGIFGGKIDKAIAYEESLQLSNFM-CKGSQDSRPE 281
Query: 156 --LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVI 206
L ++H G S+ SGHY +SG ++ D V S LQ+V + V I
Sbjct: 282 YKLFGTIVHSGFSAESGHYYAYIKDASGRWYCCNDSYVTVSTLQEVLSEKVYI 334
>gi|48475065|gb|AAT44134.1| unknown protein, contains ubiquitin carboxyl-terminal hydrolase
[Oryza sativa Japonica Group]
Length = 626
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 56/254 (22%)
Query: 9 QAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV---------- 58
+ E+G+ P II L L A HF + R ED+HEFL Y+I+ H + L++
Sbjct: 67 RTEAGALDSPAKIIRCLPLFAEHFRWGRQEDAHEFLRYIIDACHTAGLRIRKRLPASNAN 126
Query: 59 ---------------------------------ISGSNN-----LELSLDIYQLSSLDEA 80
G +N +++SLD+ +S+ +A
Sbjct: 127 GDAGEEEVRVQGPYMVMKETFGGALLSQVKCLTCKGESNKTDEIMDISLDLPGSNSVADA 186
Query: 81 LGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-CLKISCAVQ 139
L +FF E L N Y CE+C T A KQ + + P V ++ LKRF + KI+ ++
Sbjct: 187 LARFFQPEILEGSNKYSCERCKKLTSARKQLFVLRAPKVLVIQLKRFEGINGGKINRNIE 246
Query: 140 VPLYLEFGKFMHCRR-------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQ 192
L FM+ + NL +++H G S SGHY + G ++ D +
Sbjct: 247 FKETLFLSDFMYNKNQDSLPVYNLFGSIVHSGFSPDSGHYYAYVKDAIGRWYCCNDSHIS 306
Query: 193 ASNLQQVTNAYVVI 206
S+ Q V + V I
Sbjct: 307 PSSSQDVLSEKVYI 320
>gi|426355440|ref|XP_004045130.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42 [Gorilla
gorilla gorilla]
Length = 1237
Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats.
Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 52/253 (20%)
Query: 28 IAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLE--------------------- 66
IA HF + ED+HEFL Y ++ + ++ L +GSN L+
Sbjct: 107 IARHFRFGNQEDAHEFLQYTVDAMQKACL---NGSNKLDRHTQATTLVCQIFGGYLRSRV 163
Query: 67 -----------------LSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATK 109
++L+I S+++AL QF E L +N Y+C KC A+K
Sbjct: 164 KCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASK 223
Query: 110 QFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIH 162
+F+I + V L LKRF N+ KI+ V+ P YL+ +M L + ++H
Sbjct: 224 RFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIVYVLYAVLVH 283
Query: 163 HGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIYELLPSSLHHLNSS 220
G + +GHY C S+G ++ D V S+++ V + AYV+ Y + + +
Sbjct: 284 TGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY-IRSHDVKNGGEL 342
Query: 221 LHSS-SPGSVEPR 232
H + SPG PR
Sbjct: 343 THPTHSPGQSSPR 355
>gi|51094457|gb|EAL23716.1| ubiquitin specific protease 42 [Homo sapiens]
Length = 1246
Score = 88.2 bits (217), Expect = 3e-15, Method: Composition-based stats.
Identities = 71/253 (28%), Positives = 114/253 (45%), Gaps = 52/253 (20%)
Query: 28 IAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLE--------------------- 66
IA HF + ED+HEFL Y ++ + ++ L +GSN L+
Sbjct: 149 IARHFRFGNQEDAHEFLQYTVDAMQKACL---NGSNKLDRHTQATTLVCQIFGGYLRSRV 205
Query: 67 -----------------LSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATK 109
++L+I S+++AL QF E L +N Y+C KC A+K
Sbjct: 206 KCLNCKGVSDTFDPYLDITLEIKAAQSVNKALEQFVKPEQLDGENSYKCSKCKKMVPASK 265
Query: 110 QFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIH 162
+F+I + V L LKRF N+ KI+ V+ P YL+ +M L + ++H
Sbjct: 266 RFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIVYVLYAVLVH 325
Query: 163 HGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIYELLPSSLHHLNSS 220
G + +GHY C S+G ++ D V S+++ V + AYV+ Y + + +
Sbjct: 326 TGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY-IRSHDVKNGGEL 384
Query: 221 LHSS-SPGSVEPR 232
H + SPG PR
Sbjct: 385 THPTHSPGQSSPR 397
>gi|218197083|gb|EEC79510.1| hypothetical protein OsI_20578 [Oryza sativa Indica Group]
Length = 644
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 56/254 (22%)
Query: 9 QAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV---------- 58
+ E+G+ P II L L A HF + R ED+HEFL Y+I+ H + L++
Sbjct: 85 RTEAGALDSPAKIIRCLPLFAEHFRWGRQEDAHEFLRYIIDACHTAGLRIRKRLPASNAN 144
Query: 59 ---------------------------------ISGSNN-----LELSLDIYQLSSLDEA 80
G +N +++SLD+ +S+ +A
Sbjct: 145 GDAGEEEVWVQGPCMVMKETFGGALLSQVKCLTCKGESNKTDEIMDISLDLPGSNSVADA 204
Query: 81 LGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-CLKISCAVQ 139
L +FF E L N Y CE+C T A KQ + + P V ++ LKRF + KI+ ++
Sbjct: 205 LARFFQPEILEGSNKYSCERCKKLTSARKQLFVLRAPKVLVIQLKRFEGINGGKINRNIE 264
Query: 140 VPLYLEFGKFMHCRR-------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQ 192
L FM+ + NL +++H G S SGHY + G ++ D +
Sbjct: 265 FKETLFLSDFMYNKNQDSLPVYNLFGSIVHSGFSPDSGHYYAYVKDAIGRWYCCNDSHIS 324
Query: 193 ASNLQQVTNAYVVI 206
S+ Q V + V I
Sbjct: 325 PSSSQDVLSEKVYI 338
>gi|115464817|ref|NP_001056008.1| Os05g0510300 [Oryza sativa Japonica Group]
gi|113579559|dbj|BAF17922.1| Os05g0510300 [Oryza sativa Japonica Group]
gi|215767681|dbj|BAG99909.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 644
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 56/254 (22%)
Query: 9 QAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV---------- 58
+ E+G+ P II L L A HF + R ED+HEFL Y+I+ H + L++
Sbjct: 85 RTEAGALDSPAKIIRCLPLFAEHFRWGRQEDAHEFLRYIIDACHTAGLRIRKRLPASNAN 144
Query: 59 ---------------------------------ISGSNN-----LELSLDIYQLSSLDEA 80
G +N +++SLD+ +S+ +A
Sbjct: 145 GDAGEEEVRVQGPYMVMKETFGGALLSQVKCLTCKGESNKTDEIMDISLDLPGSNSVADA 204
Query: 81 LGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-CLKISCAVQ 139
L +FF E L N Y CE+C T A KQ + + P V ++ LKRF + KI+ ++
Sbjct: 205 LARFFQPEILEGSNKYSCERCKKLTSARKQLFVLRAPKVLVIQLKRFEGINGGKINRNIE 264
Query: 140 VPLYLEFGKFMHCRR-------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQ 192
L FM+ + NL +++H G S SGHY + G ++ D +
Sbjct: 265 FKETLFLSDFMYNKNQDSLPVYNLFGSIVHSGFSPDSGHYYAYVKDAIGRWYCCNDSHIS 324
Query: 193 ASNLQQVTNAYVVI 206
S+ Q V + V I
Sbjct: 325 PSSSQDVLSEKVYI 338
>gi|222632186|gb|EEE64318.1| hypothetical protein OsJ_19155 [Oryza sativa Japonica Group]
Length = 628
Score = 88.2 bits (217), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 69/254 (27%), Positives = 108/254 (42%), Gaps = 56/254 (22%)
Query: 9 QAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV---------- 58
+ E+G+ P II L L A HF + R ED+HEFL Y+I+ H + L++
Sbjct: 69 RTEAGALDSPAKIIRCLPLFAEHFRWGRQEDAHEFLRYIIDACHTAGLRIRKRLPASNAN 128
Query: 59 ---------------------------------ISGSNN-----LELSLDIYQLSSLDEA 80
G +N +++SLD+ +S+ +A
Sbjct: 129 GDAGEEEVRVQGPYMVMKETFGGALLSQVKCLTCKGESNKTDEIMDISLDLPGSNSVADA 188
Query: 81 LGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-CLKISCAVQ 139
L +FF E L N Y CE+C T A KQ + + P V ++ LKRF + KI+ ++
Sbjct: 189 LARFFQPEILEGSNKYSCERCKKLTSARKQLFVLRAPKVLVIQLKRFEGINGGKINRNIE 248
Query: 140 VPLYLEFGKFMHCRR-------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQ 192
L FM+ + NL +++H G S SGHY + G ++ D +
Sbjct: 249 FKETLFLSDFMYNKNQDSLPVYNLFGSIVHSGFSPDSGHYYAYVKDAIGRWYCCNDSHIS 308
Query: 193 ASNLQQVTNAYVVI 206
S+ Q V + V I
Sbjct: 309 PSSSQDVLSEKVYI 322
>gi|242094960|ref|XP_002437970.1| hypothetical protein SORBIDRAFT_10g005680 [Sorghum bicolor]
gi|241916193|gb|EER89337.1| hypothetical protein SORBIDRAFT_10g005680 [Sorghum bicolor]
Length = 917
Score = 87.8 bits (216), Expect = 3e-15, Method: Composition-based stats.
Identities = 74/245 (30%), Positives = 111/245 (45%), Gaps = 51/245 (20%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL--------------- 56
+G + P I+ L+ I+ F R ED+HE ++ L+E +H+ L
Sbjct: 149 TGKIVTPFRIVKNLRCISRTFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESQSAYDKS 208
Query: 57 ---KVISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVR-DN 94
K+ G SN L+LSLDI + ++L AL F E L
Sbjct: 209 LVHKIFGGRLRSQVKCTRCSHCSNKFDPFLDLSLDIAKATTLVRALENFTEDELLDGGQK 268
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC--LKISCAVQVPLYLEFGKFMH- 151
YQCE+C K A K+F+I+K P V + LKRF+ KI V L+ F+
Sbjct: 269 QYQCERCRQKVVAKKRFTIDKAPNVLTIHLKRFSPFNPREKIDKKVDFQPSLDLKPFVSD 328
Query: 152 -----CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV----QASNLQQVTNA 202
+ +L ++H G ++ SGHY C TSSG +H D++V +A L+Q A
Sbjct: 329 SKGTDFKYSLYGVLVHTGWNTQSGHYYCFVRTSSGMWHNLDDNKVRQVREADVLKQ--KA 386
Query: 203 YVVIY 207
Y++ Y
Sbjct: 387 YMLFY 391
>gi|340368667|ref|XP_003382872.1| PREDICTED: hypothetical protein LOC100636480 [Amphimedon
queenslandica]
Length = 1097
Score = 87.0 bits (214), Expect = 5e-15, Method: Composition-based stats.
Identities = 74/247 (29%), Positives = 108/247 (43%), Gaps = 52/247 (21%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE--------------------- 49
+S + P I++ L++ A HF ED+HEFL Y I+
Sbjct: 180 KSTGVVKPIPIVHNLRVFAKHFRNGHQEDAHEFLRYFIDSLQRISLIGHQPSKLDVFSKH 239
Query: 50 ---------GIHRSYLKVISG---SNN----LELSLDIYQLSSLDEALGQFFAKEYLVRD 93
G HRS +K + SN L++SLDI SL +AL + L +
Sbjct: 240 TTVIHQIFGGYHRSQVKCLKCKRFSNTYDPLLDISLDIKGCPSLQKALFSSIKPDLLDEE 299
Query: 94 NLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL---KISCAVQVPLYLEFGKFM 150
N Y C C T A KQ ++ P V + LKRF + + KI+ VQ P +L+ FM
Sbjct: 300 NKYACPFCKELTRAKKQLTVHVLPKVLTIQLKRFEFNTMFGGKINKTVQYPEHLDMRPFM 359
Query: 151 ------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV----QASNLQQVT 200
H L + ++H+G S SGHY C S+G ++ D V +A+ L Q
Sbjct: 360 SDKEGPHEWYRLYAVLVHYGYSCHSGHYYCYVRNSNGVWYSMNDSMVNQVSKATVLSQ-- 417
Query: 201 NAYVVIY 207
AY++ Y
Sbjct: 418 QAYLLFY 424
>gi|66820851|ref|XP_643982.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
gi|60472353|gb|EAL70306.1| peptidase C19 family protein [Dictyostelium discoideum AX4]
Length = 919
Score = 87.0 bits (214), Expect = 6e-15, Method: Composition-based stats.
Identities = 69/242 (28%), Positives = 106/242 (43%), Gaps = 47/242 (19%)
Query: 13 GSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI--------------HRSYLKV 58
G +I P+ I + ++ IA F R EDSHEF+ ++IE + HR +
Sbjct: 294 GKSITPKEIASNIRKIAPTFRIGRQEDSHEFIRFMIESLQKVSLSKYPKGSINHRDAMTT 353
Query: 59 ISGS------------------NN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNL 95
+ GS +N ++L +DI Q SL + L F E L N
Sbjct: 354 VIGSIFGGYLRSQVKCSQCQYESNTYDPFMDLCVDINQADSLTKGLTNFVKSELLDGSNK 413
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL---KISCAVQVPLYLEFGKFM-- 150
Y+C KC +A K+ I P + +KRF++L KI+ +Q L FM
Sbjct: 414 YKCSKCKKLVKAQKRLQIHIAPPILTCQIKRFSFLGSYGGKINRQIQFDQSLNLSPFMTQ 473
Query: 151 ---HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVV 205
H +L + ++H G S+ SGHY C S+G ++ D V +L V + AY++
Sbjct: 474 SNNHSIYDLYAVLVHLGGSTSSGHYYCYVKGSNGIWYNMDDSSVSQVSLNTVLSQKAYML 533
Query: 206 IY 207
Y
Sbjct: 534 FY 535
>gi|330802246|ref|XP_003289130.1| hypothetical protein DICPUDRAFT_15497 [Dictyostelium purpureum]
gi|325080797|gb|EGC34337.1| hypothetical protein DICPUDRAFT_15497 [Dictyostelium purpureum]
Length = 810
Score = 87.0 bits (214), Expect = 6e-15, Method: Composition-based stats.
Identities = 67/254 (26%), Positives = 112/254 (44%), Gaps = 47/254 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI--------- 51
+ + + A +G +I P+ I ++ +A F R EDSHEF+ ++IE +
Sbjct: 230 LEEHIIASHKATGRSITPKEIAANIRKVAPTFRIGRQEDSHEFIRFVIESLQKVCLSKFP 289
Query: 52 -----HRSYLKVISGS------------------NN-----LELSLDIYQLSSLDEALGQ 83
HR + + GS +N ++L +DI Q SL + L
Sbjct: 290 KGSISHRDSMTTVIGSIFGGYLRSQVKCSVCQYESNTFDPFMDLCVDINQADSLTKGLQN 349
Query: 84 FFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL---KISCAVQV 140
F E L N Y+C KC +A K+ I P + + +KRF++L K++ +Q
Sbjct: 350 FVKSEILDGSNRYKCSKCKKLVKAAKRLQIHISPPILTVQIKRFSFLGSYGGKVNKHIQF 409
Query: 141 PLYLEFGKFM-----HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
L +M H +L + ++H G S+ SGHY C ++G ++ D V +
Sbjct: 410 EQTLNLSPYMTQANDHSIYDLYAVLVHLGGSTNSGHYYCYVKGTNGIWYNMDDSMVSQVS 469
Query: 196 LQQV--TNAYVVIY 207
LQ V + AY++ Y
Sbjct: 470 LQTVLGSKAYMLFY 483
>gi|115449203|ref|NP_001048381.1| Os02g0795000 [Oryza sativa Japonica Group]
gi|47497222|dbj|BAD19267.1| putative hematopoietic-specific IL-2 deubiquitinating enzyme [Oryza
sativa Japonica Group]
gi|113537912|dbj|BAF10295.1| Os02g0795000 [Oryza sativa Japonica Group]
Length = 1185
Score = 87.0 bits (214), Expect = 7e-15, Method: Composition-based stats.
Identities = 75/256 (29%), Positives = 116/256 (45%), Gaps = 51/256 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK--V 58
+++ + + +G + P I+ L+ I+ F R ED+HE ++ L+E +H+ L V
Sbjct: 134 LQRHVNSALQSTGKILRPVHIVRNLRCISRSFRISRQEDAHELMVSLLESMHKCCLPSGV 193
Query: 59 ISGSNN----------------------------------LELSLDIYQLSSLDEALGQF 84
SGS + L+LSL+I ++L +AL F
Sbjct: 194 PSGSPSAYEKSLVHRIFGGLLRSQVRCTTCSHCSNKFDPFLDLSLEIANAATLVKALQHF 253
Query: 85 FAKEYLVR-DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC--LKISCAVQVP 141
A+E L + Y CE C K A K+F IEK P V + LKRF+ KI VQ
Sbjct: 254 TAEELLDGGEKQYNCEHCRQKVVAKKRFMIEKAPSVLTIHLKRFSPFNPRHKIDKKVQFQ 313
Query: 142 LYLEFGKF------MHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV---- 191
L + M + +L ++H G ++ SGHY C TSSG +H D++V
Sbjct: 314 PTLNLKPYVSNPEGMEFKYSLYGVLVHAGWNTQSGHYYCFVRTSSGIWHNLDDNKVYQVR 373
Query: 192 QASNLQQVTNAYVVIY 207
+A L+Q AY++ Y
Sbjct: 374 EADVLRQ--KAYMLFY 387
>gi|18400378|ref|NP_566486.1| ubiquitin carboxyl-terminal hydrolase 25 [Arabidopsis thaliana]
gi|75262798|sp|Q9FPS2.1|UBP25_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 25; AltName:
Full=Deubiquitinating enzyme 25; Short=AtUBP25; AltName:
Full=Ubiquitin thioesterase 25; AltName:
Full=Ubiquitin-specific-processing protease 25
gi|11993490|gb|AAG42763.1|AF302673_1 ubiquitin-specific protease 25 [Arabidopsis thaliana]
gi|60543331|gb|AAX22263.1| At3g14400 [Arabidopsis thaliana]
gi|332641992|gb|AEE75513.1| ubiquitin carboxyl-terminal hydrolase 25 [Arabidopsis thaliana]
Length = 661
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 104/238 (43%), Gaps = 48/238 (20%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK-------------------- 57
P I + LK+ A HF+ R ED+HEFL Y+I+ H + L+
Sbjct: 95 PNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLRYNGNEPFNGNSVVKE 154
Query: 58 VISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCE 99
+ G SN +++SL+I Q SS+ E+L +FF E L +N Y+CE
Sbjct: 155 IFGGALQSQVKCLSCGAESNKADEIMDISLEILQSSSVKESLQKFFQSEILDGNNKYRCE 214
Query: 100 KCGYKTEATKQFSIEKPPIVFILLLKRFNYL-CLKISCAVQVPLYLEFGKFM-------H 151
C A KQ SI + P + ++ LKRF + KI A+ L FM
Sbjct: 215 SCEKLVTARKQMSILQAPNILVIQLKRFGGIFGGKIDKAISFGEILVLSNFMSKASKDPQ 274
Query: 152 CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L ++H G S SGHY S G ++ D V S LQ+V AY++ +
Sbjct: 275 PEYKLFGIIVHSGFSPESGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAYILFF 332
>gi|18086363|gb|AAL57643.1| AT3g14400/MLN21_18 [Arabidopsis thaliana]
Length = 661
Score = 86.7 bits (213), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 104/238 (43%), Gaps = 48/238 (20%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK-------------------- 57
P I + LK+ A HF+ R ED+HEFL Y+I+ H + L+
Sbjct: 95 PNKISSCLKIFAEHFKLGREEDAHEFLRYVIDACHNTSLRLKKLRYNGNEPFNGNSVVKE 154
Query: 58 VISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCE 99
+ G SN +++SL+I Q SS+ E+L +FF E L +N Y+CE
Sbjct: 155 IFGGALQSQVKCLSCGAESNKADEIMDISLEILQSSSVKESLQKFFQSEILDGNNKYRCE 214
Query: 100 KCGYKTEATKQFSIEKPPIVFILLLKRFNYL-CLKISCAVQVPLYLEFGKFM-------H 151
C A KQ SI + P + ++ LKRF + KI A+ L FM
Sbjct: 215 SCEKLVTARKQMSILQAPNILVIQLKRFGGIFGGKIDKAISFGEILVLSNFMSKASKDPQ 274
Query: 152 CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L ++H G S SGHY S G ++ D V S LQ+V AY++ +
Sbjct: 275 PEYKLFGIIVHSGFSPESGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAYILFF 332
>gi|389744531|gb|EIM85714.1| cysteine proteinase [Stereum hirsutum FP-91666 SS1]
Length = 766
Score = 86.7 bits (213), Expect = 8e-15, Method: Composition-based stats.
Identities = 66/239 (27%), Positives = 104/239 (43%), Gaps = 46/239 (19%)
Query: 15 AIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------------ 56
+ P + N L IA H R EDSHEFL Y I+ + +S L
Sbjct: 202 SFTPAQVTNNLSAIAKHLRRGRQEDSHEFLRYAIDALQKSCLAGYPPKLDPKLAETTWVH 261
Query: 57 KVISGS------------------NNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQC 98
K+ G N L+LS+DI+ SS+ +AL +F A + L + Y+C
Sbjct: 262 KLFGGKLRSRVTCQSCGHNSDTFDNILDLSIDIFGASSVQQALKKFVAIDSLKGADKYKC 321
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMHCRR---- 154
+ C + A K+F+I + P+V + LKRF+ L KI A++ L +M +
Sbjct: 322 DACKRRVVAEKRFTIHEAPVVLTIHLKRFSPLGRKIGHAIKYDEKLTLAPYMSEGQFGPS 381
Query: 155 -NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNL-----QQVTNAYVVIY 207
L + H G SGHY +GS++ D+ V + + + +AY++ Y
Sbjct: 382 YALYGVISHAGGGPNSGHYYAHVRGPNGSWYEMNDETVTPAGMGGEAPTGLRSAYMLFY 440
>gi|296086774|emb|CBI32923.3| unnamed protein product [Vitis vinifera]
Length = 635
Score = 86.3 bits (212), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 101/237 (42%), Gaps = 48/237 (20%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS----GSNN--------- 64
P I + L++ A HF R ED+HEFL Y+I+ H + L++ G+N+
Sbjct: 91 PSKIQSCLRIFAEHFRLGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGNNDNGPSTTSVV 150
Query: 65 ---------------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQ 97
+++SLD+ +SL +AL FF E L +N Y+
Sbjct: 151 KDIFGGALQSQVKCLSCGAESNKTDEIMDISLDVLHFNSLKQALQNFFQPEVLDGNNKYK 210
Query: 98 CEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-CLKISCAVQVPLYLEFGKFM------ 150
C+ C A KQ SI + P V ++ LKRF L KI + L +M
Sbjct: 211 CDNCKKLVSARKQMSILQAPNVLVIQLKRFEGLYGGKIDKLIAFEEVLVLSSYMNKASQD 270
Query: 151 -HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVI 206
H NL + ++H G S SGHY + G ++ D V S LQ V + V I
Sbjct: 271 SHPEYNLFATIVHSGYSPESGHYYAYIKDAMGRWYCCNDSYVSLSTLQGVLSEKVYI 327
>gi|225462100|ref|XP_002271760.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Vitis
vinifera]
Length = 631
Score = 86.3 bits (212), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 101/237 (42%), Gaps = 48/237 (20%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS----GSNN--------- 64
P I + L++ A HF R ED+HEFL Y+I+ H + L++ G+N+
Sbjct: 87 PSKIQSCLRIFAEHFRLGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGNNDNGPSTTSVV 146
Query: 65 ---------------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQ 97
+++SLD+ +SL +AL FF E L +N Y+
Sbjct: 147 KDIFGGALQSQVKCLSCGAESNKTDEIMDISLDVLHFNSLKQALQNFFQPEVLDGNNKYK 206
Query: 98 CEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-CLKISCAVQVPLYLEFGKFM------ 150
C+ C A KQ SI + P V ++ LKRF L KI + L +M
Sbjct: 207 CDNCKKLVSARKQMSILQAPNVLVIQLKRFEGLYGGKIDKLIAFEEVLVLSSYMNKASQD 266
Query: 151 -HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVI 206
H NL + ++H G S SGHY + G ++ D V S LQ V + V I
Sbjct: 267 SHPEYNLFATIVHSGYSPESGHYYAYIKDAMGRWYCCNDSYVSLSTLQGVLSEKVYI 323
>gi|224121556|ref|XP_002330730.1| predicted protein [Populus trichocarpa]
gi|222872506|gb|EEF09637.1| predicted protein [Populus trichocarpa]
Length = 621
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 69/239 (28%), Positives = 106/239 (44%), Gaps = 48/239 (20%)
Query: 17 IPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL-------------------- 56
+P I + LK+ A HF R ED+HEFL Y+I+ H + L
Sbjct: 87 VPSKIRSCLKIFAEHFRCGRQEDAHEFLRYVIDACHNTCLRLKKLSWKGIENGGDGSVVK 146
Query: 57 KVISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQC 98
K+ G SN +++SLD+ +S+ +A+ +FF E L +N Y+C
Sbjct: 147 KIFGGALQSQVKCLCCNCESNKVDEIMDISLDVLNSNSVRDAMQKFFQPEVLDGNNKYKC 206
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-CLKISCAVQVPLYLEFGKFM------- 150
E C A KQ S+ + P V ++ LKRF + KI A+ L FM
Sbjct: 207 ENCKKLVAARKQMSVLQAPNVLVIQLKRFEGIFGGKIDKAIAFEEVLVLSSFMSKTSQDP 266
Query: 151 HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
+ NL ++H G S +GHY + G ++ D V S LQ+V + AY++ +
Sbjct: 267 QPKYNLFGIIVHSGYSLEAGHYYAYIKDAIGQWYCCNDSYVTLSTLQEVMSEKAYILFF 325
>gi|224143963|ref|XP_002325138.1| predicted protein [Populus trichocarpa]
gi|222866572|gb|EEF03703.1| predicted protein [Populus trichocarpa]
Length = 436
Score = 85.9 bits (211), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 115/243 (47%), Gaps = 47/243 (19%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL--------------- 56
SG +++P+ +++ L+ I+ +F R ED+HE+++ L+E +H+ L
Sbjct: 168 SGRSLVPKDLVSNLRCISRNFRNARQEDAHEYMVNLLESMHKCCLPSGVPSESPAAYEKS 227
Query: 57 ---KVISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVR-DN 94
K+ G SN L+LSL+I + +L AL F A E L +
Sbjct: 228 LVHKIFGGHLRSQVECQQCSYCSNKFDPFLDLSLEIAKADTLPVALRNFTAAEVLDGGEK 287
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY--LCLKISCAVQVPLYLEFGKFM-- 150
YQC++C K A K+ ++ K P V + LKRF+ K+ V L+ F+
Sbjct: 288 QYQCQRCKQKVRAKKRLTVHKAPHVLTIHLKRFHAHDPGRKVDKKVIFDRSLDIKPFVSG 347
Query: 151 ----HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYV 204
+ +L ++H+G ++ SGHY C TSS +H D++V+ + + V AY+
Sbjct: 348 SYEGELKYSLYGVLVHYGHNTHSGHYVCFVRTSSNMWHLLNDNQVRQVSEKTVLEQKAYM 407
Query: 205 VIY 207
+ Y
Sbjct: 408 LFY 410
>gi|403413958|emb|CCM00658.1| predicted protein [Fibroporia radiculosa]
Length = 1268
Score = 85.9 bits (211), Expect = 1e-14, Method: Composition-based stats.
Identities = 70/233 (30%), Positives = 101/233 (43%), Gaps = 43/233 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------------KVI 59
P I + + +IA H R EDSHEFL Y I+ + ++ L K+
Sbjct: 761 PSQITSNMHVIAKHMRRGRQEDSHEFLRYAIDALQKACLAGYPPKLDPKLAETTWVHKIF 820
Query: 60 SG------------------SNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKC 101
G + L+LS+DI S L EAL +F A ++L + Y+CEKC
Sbjct: 821 GGRLRSRVTCLDCGHNSDTFDSVLDLSIDILGSSGLKEALRKFTAVDHLKGADKYKCEKC 880
Query: 102 GYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFM----HCRRNLV 157
A KQF++ P+V + LKRF+ + KI V+ L M H ++
Sbjct: 881 KKAVTADKQFTVHDAPLVLTIHLKRFSPIGGKIGQPVKYDERLSLQSVMSSGQHGPSYVL 940
Query: 158 SAVIHH-GSSSFSGHYNCIGSTSSGSYHYFGDDRV--QASNLQQVTNAYVVIY 207
AVI H G SGHY S+G ++ DD V + NAY++ Y
Sbjct: 941 YAVISHAGGGPNSGHYYAHVKGSNGQWYEMNDDSVTRHPGAPTGMKNAYILFY 993
>gi|224114846|ref|XP_002316872.1| predicted protein [Populus trichocarpa]
gi|222859937|gb|EEE97484.1| predicted protein [Populus trichocarpa]
Length = 657
Score = 85.5 bits (210), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 70/237 (29%), Positives = 101/237 (42%), Gaps = 48/237 (20%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK-------------------- 57
P I + LK+ A HF R ED+HEFL Y+I+ H + L+
Sbjct: 99 PAKIQSCLKIFAEHFRCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGIENGGGGGVSVV 158
Query: 58 --VISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQ 97
+ G SN +++SLD+ S+ +A+ +FF E L +N Y+
Sbjct: 159 KEIFGGALQSQVKCLCCNYESNKVDEIMDISLDVLNSYSVRDAMQKFFQPEVLDGNNKYK 218
Query: 98 CEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-CLKISCAVQVPLYLEFGKFM------ 150
CEKC A KQ SI + P V ++ LKRF + KI A+ L FM
Sbjct: 219 CEKCQKLVAARKQMSILQAPNVLVIQLKRFEGIFGAKIDKAIAFEEVLVLSSFMSKTSQD 278
Query: 151 -HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVI 206
NL ++H G S SGHY + G ++ D V S LQ+V + V +
Sbjct: 279 PQPEYNLFGTIVHSGYSPESGHYYAYIKDAMGRWYCCNDSYVTLSTLQEVLSEKVYV 335
>gi|357125023|ref|XP_003564195.1| PREDICTED: uncharacterized protein LOC100826635 [Brachypodium
distachyon]
Length = 895
Score = 85.5 bits (210), Expect = 2e-14, Method: Composition-based stats.
Identities = 72/245 (29%), Positives = 110/245 (44%), Gaps = 51/245 (20%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL--------------- 56
+G + P I+ L+ I+ F R ED+HE ++ L+E +H+ L
Sbjct: 112 TGKIVTPSQIVKNLRCISRSFRNSRQEDAHELMVNLLESMHKCCLPSGVPSESPSAYEKS 171
Query: 57 ---KVISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYL-VRDN 94
++ G SN L+LSLDI + S+L AL F E L
Sbjct: 172 LVHRIFGGRLRSQVKCTRCSHCSNKFDPFLDLSLDIAKASNLVRALQNFTEDELLDGGQK 231
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL--KISCAVQVPLYLEFGKFMH- 151
YQCE+C K A K+F+I++ P V + LKRF+ KI V L+ F+
Sbjct: 232 QYQCERCRQKVVAKKRFTIDRAPNVLTIHLKRFSPFNPRDKIDKKVDFQPVLDLKPFVSD 291
Query: 152 -----CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV----QASNLQQVTNA 202
+ +L ++H G ++ GHY C TSSG +H D++V +A L+Q A
Sbjct: 292 SKVSDYKYSLYGVLVHAGWNTQCGHYYCFVRTSSGMWHNLDDNQVRQVREADVLKQ--KA 349
Query: 203 YVVIY 207
Y++ Y
Sbjct: 350 YMLFY 354
>gi|226506140|ref|NP_001147905.1| UBP25 [Zea mays]
gi|195614492|gb|ACG29076.1| UBP25 [Zea mays]
Length = 644
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 106/253 (41%), Gaps = 55/253 (21%)
Query: 9 QAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK-----VISGSN 63
+A++G+ P +I + L A HF + R ED+HEFL Y+++ H + L+ + G+N
Sbjct: 84 RADAGALDSPAKVIRCMPLFAEHFRWGRQEDAHEFLRYVVDACHTAGLRTRKLLLAKGAN 143
Query: 64 N------------------------------------------LELSLDIYQLSSLDEAL 81
+++SLD+ SS+ +AL
Sbjct: 144 GNCGEDGRGQGACLVMRETFGGALLSQVKCLVCNRESNKTDEIMDISLDLPGSSSVADAL 203
Query: 82 GQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-CLKISCAVQV 140
+FF E L N Y CE+C T A KQ + + P V ++ LKRF + KI+ ++
Sbjct: 204 ARFFKPEILEGANKYSCERCKTLTSAQKQMFMLRAPKVLVIQLKRFEGINGGKINRNIEF 263
Query: 141 PLYLEFGKFMHCRR-------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
L M+ + NL ++H G S SGHY SG + D V
Sbjct: 264 KETLGISDCMYNKSQDPQPVYNLFGCIVHSGLSPESGHYYAYVKDPSGQWFCCNDSHVSL 323
Query: 194 SNLQQVTNAYVVI 206
S+ Q V + V I
Sbjct: 324 SSSQNVLSEKVYI 336
>gi|255579710|ref|XP_002530694.1| cysteine-type endopeptidase, putative [Ricinus communis]
gi|223529750|gb|EEF31689.1| cysteine-type endopeptidase, putative [Ricinus communis]
Length = 777
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 64/232 (27%), Positives = 108/232 (46%), Gaps = 35/232 (15%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK------------- 57
E S + P I++K++ I H + R ED+HEFL Y ++ + +LK
Sbjct: 410 EGESPLSPIRILSKIQKIGSHLGHGREEDAHEFLRYAVDTMQSVFLKEAGSLVPLSEEST 469
Query: 58 ------VISGSNNLELSLDIY-----QLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTE 106
+ S E +D+ + SL++AL QF A E L +N Y C +C +
Sbjct: 470 LIKCMRCLGKSERFERIMDLTVEIDGNIESLEQALTQFTADEMLDGENKYNCSRCKSYVK 529
Query: 107 ATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------LVSA 159
A K+ +I + P + ++LKRF K++ +V+ P L+ +M + L +
Sbjct: 530 AKKKLTILEAPNILTIVLKRFQSSNFGKLNKSVRFPEVLDMAPYMCGTSDKSPQYSLYAV 589
Query: 160 VIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
V+H S + +GHY C TS G + D V+ L++V AY+++Y
Sbjct: 590 VVHRDTMSDASTGHYVCYIKTSRGEWFGINDSIVKPVELKRVLLEEAYMLLY 641
>gi|302781702|ref|XP_002972625.1| hypothetical protein SELMODRAFT_2140 [Selaginella moellendorffii]
gi|300160092|gb|EFJ26711.1| hypothetical protein SELMODRAFT_2140 [Selaginella moellendorffii]
Length = 303
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 100/231 (43%), Gaps = 42/231 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI---------------HRSYLKVISG- 61
P+ I L+ A HF R ED+HE L Y I+ ++ +K I G
Sbjct: 66 PQRIYKYLQTFAKHFRAGRQEDAHELLRYAIDACDSACARLQKRGSKSSDQTVMKEIFGG 125
Query: 62 ------------------SNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGY 103
+ ++LSLDI + +L EA+ FF E L +N YQCEKC
Sbjct: 126 FLQSQIWCLSCNAVSSKLDSVMDLSLDIVRTKTLKEAICNFFQPEVLDGNNKYQCEKCKK 185
Query: 104 KTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFM-------HCRRN 155
+ A KQ SI + P V ++ LKRF N+L KI V+ L+ M H +
Sbjct: 186 LSVARKQLSIYQSPNVLVIQLKRFENFLGGKIDAHVEFEEELKLRSHMSKNSPDVHPDYS 245
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVI 206
L + V+H G S + GHY G ++ D V A++ V + V I
Sbjct: 246 LYAVVVHSGFSQYGGHYYAYVKDPRGQWYCCNDSFVSAASSATVLSERVYI 296
>gi|255584453|ref|XP_002532957.1| conserved hypothetical protein [Ricinus communis]
gi|223527267|gb|EEF29423.1| conserved hypothetical protein [Ricinus communis]
Length = 834
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 114/243 (46%), Gaps = 47/243 (19%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL--------------- 56
+G +++P+ +++ L+ I+ +F R ED+HE+++ L+E +H+ L
Sbjct: 66 TGRSLVPKDLVSNLRCISRNFRNARQEDAHEYMVNLLESMHKCCLPSGVPSESPAAYEKS 125
Query: 57 ---KVISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVR-DN 94
K+ G SN L+LSL+I + +L AL F A E L +
Sbjct: 126 LVHKIFGGRLRSQVECQQCSYCSNKFDPFLDLSLEIVKADTLPVALRNFTAAELLDGGEK 185
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY--LCLKISCAVQVPLYLEFGKFM-- 150
YQC+KC K A K+ ++ P V + LKRF+ K+ V L+ F+
Sbjct: 186 HYQCQKCKQKVRAKKRLTVHNAPNVLTIHLKRFHAHDPGRKVDKKVLFDHSLDMKPFVSG 245
Query: 151 ----HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYV 204
+ +L ++H G S+ SGHY C TSSG +H D+ V+ + + V + AY+
Sbjct: 246 SYEGDLKYSLYGVLVHFGHSTHSGHYVCFIRTSSGIWHLLNDNEVRPVSEKVVLDQKAYM 305
Query: 205 VIY 207
+ Y
Sbjct: 306 LFY 308
>gi|330822504|ref|XP_003291691.1| hypothetical protein DICPUDRAFT_156310 [Dictyostelium purpureum]
gi|325078127|gb|EGC31796.1| hypothetical protein DICPUDRAFT_156310 [Dictyostelium purpureum]
Length = 536
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 117/267 (43%), Gaps = 50/267 (18%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH--------------RSYL 56
E+G +I P +I ++ +A F R EDSHEF ++I+ + R +
Sbjct: 172 ETGKSITPIVIAKNIEKVAPTFRIGRQEDSHEFFCFVIDSLQKVCLSKFPKGTISPRDSM 231
Query: 57 KVISGS-----------------------NNLELSLDIYQLSSLDEALGQFFAKEYLVRD 93
I GS ++LS+DI Q SL + L F E L +
Sbjct: 232 TTIIGSIFGGYLRSQLKCSVCQYESNKFDEFMDLSIDINQADSLTKGLQNFVKPEILDGE 291
Query: 94 NLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL---CLKISCAVQVPLYLEFGKFM 150
N Y+C KC +A K IE P + + +KRF++L K + +Q L+ +M
Sbjct: 292 NGYKCAKCKKLVKAEKSLQIEISPPILTVQIKRFSFLDSYGGKDNKHIQFGQTLDLSPYM 351
Query: 151 -----HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAY 203
H +L + ++H G S+ SGHY C ++G ++ D V +L+ V + AY
Sbjct: 352 TQTNDHSIYDLYAVLVHLGDSTNSGHYYCYVKGTNGVWYKMDDSMVSQVSLKSVLRSKAY 411
Query: 204 VVIY---ELLPSSLHHLNSSLHSSSPG 227
++ Y + + S + NS + ++ G
Sbjct: 412 MLFYSKRDTVKSINTNTNSVIQKNTLG 438
>gi|302780611|ref|XP_002972080.1| hypothetical protein SELMODRAFT_2133 [Selaginella moellendorffii]
gi|300160379|gb|EFJ26997.1| hypothetical protein SELMODRAFT_2133 [Selaginella moellendorffii]
Length = 303
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 70/231 (30%), Positives = 100/231 (43%), Gaps = 42/231 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI---------------HRSYLKVISG- 61
P+ I L+ A HF R ED+HE L Y I+ ++ +K I G
Sbjct: 66 PQRIYKYLQTFAKHFRAGRQEDAHELLRYAIDACDSACARLQKRGSKSSDQTVMKEIFGG 125
Query: 62 ------------------SNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGY 103
+ ++LSLDI + +L EA+ FF E L +N YQCEKC
Sbjct: 126 FLQSQIWCLSCNAVSSKLDSVMDLSLDIVRTKTLKEAICNFFQPEVLDGNNKYQCEKCKK 185
Query: 104 KTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFM-------HCRRN 155
+ A KQ SI + P V ++ LKRF N+L KI V+ L+ M H +
Sbjct: 186 LSVARKQLSIYQSPNVLVIQLKRFENFLGGKIDTHVEFEEELKLRSHMSKNSPDVHPDYS 245
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVI 206
L + V+H G S + GHY G ++ D V A++ V + V I
Sbjct: 246 LYAVVVHSGFSQYGGHYYAYVKDPRGQWYCCNDSFVSAASSATVLSERVYI 296
>gi|255577279|ref|XP_002529521.1| cysteine-type endopeptidase, putative [Ricinus communis]
gi|223531005|gb|EEF32859.1| cysteine-type endopeptidase, putative [Ricinus communis]
Length = 644
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 105/249 (42%), Gaps = 61/249 (24%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS------GSNN------- 64
P I + LK+ A HF+ + ED+HEFL Y+I+ H + L+++ SNN
Sbjct: 95 PAKIQSCLKIFAEHFKGGQQEDAHEFLRYVIDACHNTCLRLMKLRRKGINSNNKNYDNDT 154
Query: 65 --------------------------------------LELSLDIYQLSSLDEALGQFFA 86
+++SLD+ +SL EA+ +FF
Sbjct: 155 TTSTSTSTSVVKEIFGGTLQSQVKCLSCHSESNKVDEIMDISLDVLHSNSLREAMQKFFQ 214
Query: 87 KEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-CLKISCAVQVPLYLE 145
E L +N Y+CE C A KQ SI + P + ++ LKRF + KI A+ L
Sbjct: 215 PEILDGNNKYRCESCKKLVAARKQMSILQAPNILVIQLKRFEGIFGGKIDKAIAFEEVLV 274
Query: 146 FGKFMHCRR--------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQ 197
FM C+ NL ++H G S SGHY ++G ++ D V S +Q
Sbjct: 275 LSSFM-CKGSQDPRPEYNLFGTIVHSGYSPESGHYYAYIKDATGRWYCCNDSYVTLSTMQ 333
Query: 198 QVTNAYVVI 206
V + V I
Sbjct: 334 DVLSEKVYI 342
>gi|297834320|ref|XP_002885042.1| ubiquitin-specific protease 25 [Arabidopsis lyrata subsp. lyrata]
gi|297330882|gb|EFH61301.1| ubiquitin-specific protease 25 [Arabidopsis lyrata subsp. lyrata]
Length = 662
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 71/238 (29%), Positives = 104/238 (43%), Gaps = 48/238 (20%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV----ISG------------ 61
P I + LK+ A HF+ R ED+HEFL Y+I+ H + L++ I G
Sbjct: 95 PNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLRIKGNEPFNGNTVVKE 154
Query: 62 ------------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCE 99
SN +++SL+I SS+ E++ +FF E L +N Y+CE
Sbjct: 155 IFGGALQSQVKCLSCGAESNKADEIMDISLEILHSSSVKESMQKFFQSEILDGNNKYKCE 214
Query: 100 KCGYKTEATKQFSIEKPPIVFILLLKRFNYL-CLKISCAVQVPLYLEFGKFM-------H 151
C A KQ SI + P + ++ LKRF + KI A+ L FM
Sbjct: 215 TCEKLVTARKQMSILQAPNILVIQLKRFGGIFGGKIDKAISFGEILVLSNFMSKASKDPQ 274
Query: 152 CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L ++H G S SGHY S G ++ D V S LQ+V AY++ +
Sbjct: 275 PEYKLFGIIVHSGFSPESGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAYILFF 332
>gi|407037720|gb|EKE38765.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Entamoeba nuttalli P19]
Length = 584
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 61/241 (25%), Positives = 106/241 (43%), Gaps = 39/241 (16%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
+ + + ++ + P + LK ++ + Y+ ED+ EF L L++ +H + +
Sbjct: 109 LERIMKEAFEKNNQPLKPIVFEKNLKKLSSSLQRYQQEDATEFYLLLLDHLHEAI--IGK 166
Query: 61 GSNNLE-------------------------------LSLDIYQLSSLDEALGQFFAKEY 89
G N + L ++I + +L+ QFF KE
Sbjct: 167 GKNKISAISSIFHVELVSRITCYNCTRFNDHDEHFSVLPIEITKQKTLESGFDQFFKKEM 226
Query: 90 LVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKF 149
+ Y CEKC K+ +K + ++ P + + LKRF + KI+ V PL L K+
Sbjct: 227 ISH---YHCEKCNTKSNVSKYYFFKRLPWILPIQLKRFTWDEKKINGKVAFPLQLNISKY 283
Query: 150 -MHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVI 206
M +L + V+H G + FSGHY T SG + F DD V+ +++ V AY++
Sbjct: 284 GMDGLYDLYAIVVHLGKTKFSGHYISYCKTPSGGWFRFDDDEVKPVSIKAVLQEEAYMLF 343
Query: 207 Y 207
Y
Sbjct: 344 Y 344
>gi|149742816|ref|XP_001494472.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Equus
caballus]
Length = 535
Score = 84.3 bits (207), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 111/248 (44%), Gaps = 44/248 (17%)
Query: 4 TLAACQAESGSAII-PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRS----YLKV 58
TL A Q A+ P +I L + F R ED+HEFL++ ++ + ++ Y +V
Sbjct: 125 TLCAMQVHITRALYHPGDVIQPLPELVTGFHRRRQEDAHEFLMFTLDAMQQACLSEYKQV 184
Query: 59 ISGSNN------------------------------LELSLDIYQLSSLDEALGQFFAKE 88
S+N L+++LDI S+++AL Q E
Sbjct: 185 DGHSDNTLVRQIFGGYWRSQIQCLHCHGVSDTFDPYLDVTLDIKAALSVNQALEQLVKPE 244
Query: 89 YLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFG 147
L +N Y C C K A+K ++ V +LLLKRF N+ K+ VQ P YL+
Sbjct: 245 KLDGENSYHCSMCLKKVPASKTLTLHTSSKVLMLLLKRFSNFTGSKMPKDVQYPEYLDMQ 304
Query: 148 KFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN 201
++M + + L + ++H G S +GHY C +G ++ D +V A ++ +
Sbjct: 305 QYMSQQNSGPLLYVLYAVLVHAGWSCHNGHYFCYIKAGNGQWYKMDDAKVTACDVTSALS 364
Query: 202 --AYVVIY 207
AYV+ Y
Sbjct: 365 QCAYVLFY 372
>gi|297273759|ref|XP_001108648.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36-like [Macaca
mulatta]
Length = 1122
Score = 84.0 bits (206), Expect = 5e-14, Method: Composition-based stats.
Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 11/179 (6%)
Query: 46 YLIEGIHRSYLKVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGY 103
YL + S K +S + + L+++L+I Q +++ AL F + L +N Y C KC
Sbjct: 247 YLRSRVKCSMCKSVSDTYDPYLDVALEIRQAANIVRALELFVKADVLSGENAYMCAKCKK 306
Query: 104 KTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRR------NL 156
K A+K+F+I + V L LKRF N+ KI+ V P +L +M L
Sbjct: 307 KVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPVMYGL 366
Query: 157 VSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIYELLPSS 213
+ ++H G S +GHY C S+G ++ D V +SN++ V N AYV+ Y +P S
Sbjct: 367 YAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRIPGS 425
>gi|167387647|ref|XP_001738248.1| ubiquitin carboxyl-terminal hydrolase DUB-1 [Entamoeba dispar
SAW760]
gi|165898621|gb|EDR25439.1| ubiquitin carboxyl-terminal hydrolase DUB-1, putative [Entamoeba
dispar SAW760]
Length = 585
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 105/235 (44%), Gaps = 39/235 (16%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLE 66
A + + + P + LK ++ + Y+ ED+ EF L LI+ +H + + G N +
Sbjct: 116 AFEKNNNQPLKPIIFEKNLKKLSSSLQRYQQEDATEFYLLLIDHLHEAIIG--KGKNKIS 173
Query: 67 -------------------------------LSLDIYQLSSLDEALGQFFAKEYLVRDNL 95
L ++I + +L+ QFF KE +
Sbjct: 174 AISSIFHVELISRITCYNCTRFNDHDEHFSVLPIEITKQKTLESGFDQFFKKEMISH--- 230
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKF-MHCRR 154
Y CEKC K+ A+K + ++ P V + LKRF + KI+ V PL L K+ +
Sbjct: 231 YHCEKCNTKSNASKCYFFKRLPWVLPIQLKRFTWDEKKINGKVTFPLQLNISKYGVDGLY 290
Query: 155 NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+L + V+H G + FSGHY T SG + F D+ V+ +++ V AY++ Y
Sbjct: 291 DLYAIVVHLGKTKFSGHYISYCKTPSGGWFRFDDEEVKPVSIKVVLQEEAYMLFY 345
>gi|410981888|ref|XP_004001484.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 36-like, partial [Felis catus]
Length = 872
Score = 83.6 bits (205), Expect = 7e-14, Method: Composition-based stats.
Identities = 56/167 (33%), Positives = 84/167 (50%), Gaps = 12/167 (7%)
Query: 73 QLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLC 131
Q +++ AL F + L +N Y C KC K A+K+F+I + V L LKRF N+
Sbjct: 1 QAANIVRALELFVKPDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSG 60
Query: 132 LKISCAVQVPLYLEFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
KI+ V P +L +M L + ++H G S +GHY C S+G ++
Sbjct: 61 GKITKDVGYPEFLNLRPYMSQSSGEPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQ 120
Query: 186 FGDDRVQASNLQQVTN--AYVVIYELLPSSLHHLNSSL---HSSSPG 227
D V++SN++ V N AYV+ Y +P S + SL SS+PG
Sbjct: 121 MNDSSVRSSNIKVVLNQQAYVLFYMQIPGSKKSPDGSLPRTASSAPG 167
>gi|355754426|gb|EHH58391.1| hypothetical protein EGM_08229 [Macaca fascicularis]
Length = 1130
Score = 83.6 bits (205), Expect = 7e-14, Method: Composition-based stats.
Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 11/179 (6%)
Query: 46 YLIEGIHRSYLKVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGY 103
YL + S K +S + + L+++L+I Q +++ AL F + L +N Y C KC
Sbjct: 251 YLRSRVKCSMCKSVSDTYDPYLDVALEIRQAANIVRALELFVKADVLSGENAYMCAKCKK 310
Query: 104 KTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRR------NL 156
K A+K+F+I + V L LKRF N+ KI+ V P +L +M L
Sbjct: 311 KVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPVMYGL 370
Query: 157 VSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIYELLPSS 213
+ ++H G S +GHY C S+G ++ D V +SN++ V N AYV+ Y +P S
Sbjct: 371 YAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRIPGS 429
>gi|355568976|gb|EHH25257.1| hypothetical protein EGK_09045 [Macaca mulatta]
Length = 1126
Score = 83.6 bits (205), Expect = 7e-14, Method: Composition-based stats.
Identities = 58/179 (32%), Positives = 91/179 (50%), Gaps = 11/179 (6%)
Query: 46 YLIEGIHRSYLKVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGY 103
YL + S K +S + + L+++L+I Q +++ AL F + L +N Y C KC
Sbjct: 251 YLRSRVKCSMCKSVSDTYDPYLDVALEIRQAANIVRALELFVKADVLSGENAYMCAKCKK 310
Query: 104 KTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRR------NL 156
K A+K+F+I + V L LKRF N+ KI+ V P +L +M L
Sbjct: 311 KVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQNNGDPVMYGL 370
Query: 157 VSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIYELLPSS 213
+ ++H G S +GHY C S+G ++ D V +SN++ V N AYV+ Y +P S
Sbjct: 371 YAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRIPGS 429
>gi|340508861|gb|EGR34476.1| hypothetical protein IMG5_010250 [Ichthyophthirius multifiliis]
Length = 347
Score = 83.6 bits (205), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 107/246 (43%), Gaps = 39/246 (15%)
Query: 1 MRKTLAACQAESGSAII-PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVI 59
++K + C + + + II P IIN +K I +F + DSHEFL +L+E + +SY I
Sbjct: 70 VQKHVKQCFSNNSNNIIAPSEIINNMKYINKNFRLGKQHDSHEFLRFLLEAMQKSYFIDI 129
Query: 60 SGSNNLELSLDIYQL--------------------------------SSLDEALGQFFAK 87
LE I+ + ++D++ FF K
Sbjct: 130 KKQKILEEQTPIFNIFGGKLISQIQCFSCKQISQNIETFYDLLLECKQNIDQSFESFFKK 189
Query: 88 EYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFG 147
E L +N Y+C C + +K + I+K P + + LKRFN +K++ Q +
Sbjct: 190 EILSGNNKYRCSFCKNLVDCSKGYVIQKFPNILTIQLKRFNNFMMKVNKHTQFAPTINLK 249
Query: 148 KFMHCRR----NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN-- 201
K+ ++ +L +IH G GHY C + + ++ D V + Q+V N
Sbjct: 250 KYSTNQKDQIYDLYGILIHVGHDLNYGHYYCYTKSPNKQWYCMNDSSVNQVSFQEVQNEK 309
Query: 202 AYVVIY 207
A+++ Y
Sbjct: 310 AFLLFY 315
>gi|357148128|ref|XP_003574640.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like
[Brachypodium distachyon]
Length = 970
Score = 83.2 bits (204), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 72/256 (28%), Positives = 119/256 (46%), Gaps = 53/256 (20%)
Query: 14 SAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH--------------------- 52
+A+ P I++ L I F + ED+HEFL + I+ +
Sbjct: 512 TALSPTGILSHLHEIGSSFGPGKQEDAHEFLRHSIDAMQSVCMKEARKSGAHRLAEETTL 571
Query: 53 ---------RSYLKVIS--GSNN-----LELSLDIY-QLSSLDEALGQFFAKEYLVRDNL 95
RS +K GS+ L+L+++I +SSL+EAL +F + E L +N
Sbjct: 572 VQLIFGGYLRSKIKCTRCHGSSEQSERMLDLTVEIDGDISSLEEALQRFTSTEVLDGNNR 631
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRR 154
YQC +C A K+ +I + P V + LKR+ KIS A++ P L +M
Sbjct: 632 YQCTRCKSYERAKKKLTISEAPNVLTIALKRYQSGKFGKISKAIRFPETLNLSSYMSTTD 691
Query: 155 N------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYV 204
+ L V+HH +++FSGHY C + G ++ D +V++ +L+ V + AY+
Sbjct: 692 DNSPVYSLYGVVVHHDVMNAAFSGHYVCYVKDTHGKWYKTDDSQVKSVSLENVMSKCAYM 751
Query: 205 VIY----ELLPSSLHH 216
++Y PSS+ H
Sbjct: 752 LLYARCSPRAPSSVRH 767
>gi|147832340|emb|CAN75517.1| hypothetical protein VITISV_033021 [Vitis vinifera]
Length = 918
Score = 83.2 bits (204), Expect = 8e-14, Method: Composition-based stats.
Identities = 66/227 (29%), Positives = 106/227 (46%), Gaps = 47/227 (20%)
Query: 28 IAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------------KVISG-------- 61
I+ +F R ED+HE++++L+E +H+ L K+ G
Sbjct: 146 ISRNFRNARQEDAHEYMVHLLETMHKCCLPSGVPSESPSAYEKSLVHKIFGGLLRSQVKC 205
Query: 62 ------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVR-DNLYQCEKCGYKTEATKQ 110
SN L+LSL+I++ SL +AL F A E L + YQC++C K +A KQ
Sbjct: 206 MQCSYCSNKFDPFLDLSLEIFKADSLHKALVHFTATEQLDGGERQYQCQRCKQKVKALKQ 265
Query: 111 FSIEKPPIVFILLLKRFNYL--CLKISCAVQVPLYLEFGKFM------HCRRNLVSAVIH 162
++ K P V + LKRF KI V ++ F+ + + L ++H
Sbjct: 266 LTVHKAPYVLTIHLKRFGAHDPGQKIDKKVHFGPTMDLKPFVSGSYEENLKYTLYGVLVH 325
Query: 163 HGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
G S+ SGHY C TS+G ++ D+RV + + V + AY++ Y
Sbjct: 326 AGWSTHSGHYYCFVRTSTGMWYSLDDNRVVQVSERTVLDQKAYMLFY 372
>gi|443897312|dbj|GAC74653.1| ubiquitin carboxyl-terminal hydrolase [Pseudozyma antarctica T-34]
Length = 744
Score = 83.2 bits (204), Expect = 9e-14, Method: Composition-based stats.
Identities = 73/263 (27%), Positives = 112/263 (42%), Gaps = 49/263 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL--------------------- 56
P+ LK A R ED+HE+L +L+E + +S L
Sbjct: 266 PQEFNRNLKAFAKPLRQGRQEDAHEYLRFLLEALQQSCLARAPKSLKPDDPARRTTFVHK 325
Query: 57 ----KVIS-------GSNN------LELSLDIYQ-LSSLDEALGQFFAKEYLVRDNLYQC 98
K+ S G N+ ++LSLD+ + ++SL +AL F AK++L Y+C
Sbjct: 326 TFGGKLRSRVMCHSCGHNSDTFDPFMDLSLDVRKGINSLTDALRAFVAKDHLTGAEKYKC 385
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMH-----CR 153
+KC K +ATKQF+I+ P + LKRF K+S + L ++ R
Sbjct: 386 DKCKRKVDATKQFTIDAAPPALTVHLKRFTVFGGKVSRQIAFDDMLNIAPYLSVNNGPAR 445
Query: 154 RNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN---AYVVIYELL 210
L + V H+GS SGHY + SG + D V TN AY++ Y L
Sbjct: 446 YRLYATVHHYGSGPNSGHYVASVRSPSGKWMRMDDSHVAEMGRSGPTNDQSAYILFY--L 503
Query: 211 PSSLHHLNSSLHSSSPGSVEPRT 233
L ++L + +P P +
Sbjct: 504 REKDEALETALAAVAPPKSAPTS 526
>gi|356502067|ref|XP_003519843.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Glycine
max]
Length = 938
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 124/268 (46%), Gaps = 51/268 (19%)
Query: 9 QAESG-SAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNL-- 65
+A+ G S + P I++K+ I H R ED+HEFL +++ + LK + S+ L
Sbjct: 468 KAKEGISPLSPIGILSKIHKIGSHLGRGREEDAHEFLRCVVDTMQSICLKEVGVSSPLAE 527
Query: 66 ---------------------------------ELSLDIY-QLSSLDEALGQFFAKEYLV 91
+L+++I + +L+EALGQF A E L
Sbjct: 528 ETTLVSYTFGGYLRSKIKCLRCLGKSERYERMMDLTVEIDGDIGTLEEALGQFTAPEILD 587
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFM 150
+DN Y C +C +A K+ ++ + P + ++LKRF K++ +VQ P L +M
Sbjct: 588 KDNKYNCSRCKTYVKARKKLTVLEAPNILTIVLKRFQSGNFEKLNKSVQFPEVLNMAPYM 647
Query: 151 HCRRN------LVSAVIHHG----SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV- 199
++ L + V+H +++FSGHY C G + D RV+ L +V
Sbjct: 648 SGTKDKSPLYSLYAVVVHLDLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVL 707
Query: 200 -TNAYVVIYEL-LPSSLHHLNSSLHSSS 225
AY+++Y P L ++S++ SS+
Sbjct: 708 SERAYMLLYARHSPKPLGLVSSNVISSA 735
>gi|115476910|ref|NP_001062051.1| Os08g0478500 [Oryza sativa Japonica Group]
gi|42407867|dbj|BAD09009.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
gi|113624020|dbj|BAF23965.1| Os08g0478500 [Oryza sativa Japonica Group]
Length = 978
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/267 (26%), Positives = 124/267 (46%), Gaps = 51/267 (19%)
Query: 15 AIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE-------------GIHR-----SYL 56
A+ P I++ L I F + ED+HEFL Y I+ G HR + +
Sbjct: 511 ALSPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRLHEETTLM 570
Query: 57 KVISGS-------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLY 96
++I G L+L+++I +SSL+ AL +F + E L DN Y
Sbjct: 571 QLIFGGYLRSKIRCTRCDATSEQHERILDLTVEIDGDISSLEGALERFTSTEVLDGDNKY 630
Query: 97 QCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN 155
+C +C A K+ +I + P V + LKR+ KI+ A++ P L ++M + +
Sbjct: 631 KCSRCKSHERAKKKLTISEAPNVLTIALKRYQSGKFGKINKAIRFPETLNLQRYMSPKAD 690
Query: 156 -------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYV 204
L + V+HH +++FSGHY C + G ++ D +V+ +L+ V + AY+
Sbjct: 691 DTSPVYSLYAVVVHHDIMNAAFSGHYVCYVKDTHGKWYKTDDSQVKPVSLENVMSKCAYM 750
Query: 205 VIY-ELLPSSLHHLNSSLHSSSPGSVE 230
++Y P + + +L + P V+
Sbjct: 751 LLYARCSPRAPSSVRPALMAQDPARVK 777
>gi|218202292|gb|EEC84719.1| hypothetical protein OsI_31685 [Oryza sativa Indica Group]
Length = 927
Score = 82.8 bits (203), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 49/239 (20%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK-------------------- 57
P I++ L+ I F R ED+HEFL Y I+ + + +K
Sbjct: 446 PTGILSHLRDIGSSFGPGREEDAHEFLRYAIDTMQSASMKEAKKNGVYGLPEETTLVQLI 505
Query: 58 ------------VISGSNN-----LELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQCE 99
+ GS+ L+L+++I +++L+EAL +F + E L DN Y C
Sbjct: 506 FGGYLRSKIKCTMCQGSSEQCERILDLTVEIDGDINTLEEALHRFTSTEILDGDNRYNCS 565
Query: 100 KCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN--- 155
+C A K+ +I + P + + LKR+ KI+ AV+ YL +M +
Sbjct: 566 RCKSYERAKKKLTISEAPNILTIALKRYQSGNFGKINKAVRFTEYLNLSNYMSTADDISP 625
Query: 156 ---LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
L + V+HH +++FSGHY C + G +H D +V+ +L++V + AY++ Y
Sbjct: 626 VYQLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWHKMDDSQVKPVSLEKVLSKCAYMLFY 684
>gi|50725209|dbj|BAD33960.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
gi|222641732|gb|EEE69864.1| hypothetical protein OsJ_29670 [Oryza sativa Japonica Group]
Length = 940
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 111/239 (46%), Gaps = 49/239 (20%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK-------------------- 57
P I++ L+ I F R ED+HEFL Y I+ + + +K
Sbjct: 459 PTGILSHLRDIGSSFGPGREEDAHEFLRYAIDTMQSASMKEAKKNGVYGLPEETTLVQLI 518
Query: 58 ------------VISGSNN-----LELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQCE 99
+ GS+ L+L+++I +++L+EAL +F + E L DN Y C
Sbjct: 519 FGGYLRSKIKCTMCQGSSEQCERILDLTVEIDGDINTLEEALHRFTSTEILDGDNRYNCS 578
Query: 100 KCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN--- 155
+C A K+ +I + P + + LKR+ KI+ AV+ YL +M +
Sbjct: 579 RCKSYERAKKKLTISEAPNILTIALKRYQSGNFGKINKAVRFTEYLNLSNYMSTADDISP 638
Query: 156 ---LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
L + V+HH +++FSGHY C + G +H D +V+ +L++V + AY++ Y
Sbjct: 639 VYQLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWHKMDDSQVKPVSLEKVLSKCAYMLFY 697
>gi|297609602|ref|NP_001063411.2| Os09g0464400 [Oryza sativa Japonica Group]
gi|255678959|dbj|BAF25325.2| Os09g0464400 [Oryza sativa Japonica Group]
Length = 918
Score = 82.4 bits (202), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 113/243 (46%), Gaps = 49/243 (20%)
Query: 14 SAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK---------------- 57
S + P I++ L+ I F R ED+HEFL Y I+ + + +K
Sbjct: 455 SHLSPTGILSHLRDIGSSFGPGREEDAHEFLRYAIDTMQSASMKEAKKNGVYGLPEETTL 514
Query: 58 ----------------VISGSNN-----LELSLDIY-QLSSLDEALGQFFAKEYLVRDNL 95
+ GS+ L+L+++I +++L+EAL +F + E L DN
Sbjct: 515 VQLIFGGYLRSKIKCTMCQGSSEQCERILDLTVEIDGDINTLEEALHRFTSTEILDGDNR 574
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRR 154
Y C +C A K+ +I + P + + LKR+ KI+ AV+ YL +M
Sbjct: 575 YNCSRCKSYERAKKKLTISEAPNILTIALKRYQSGNFGKINKAVRFTEYLNLSNYMSTAD 634
Query: 155 N------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYV 204
+ L + V+HH +++FSGHY C + G +H D +V+ +L++V + AY+
Sbjct: 635 DISPVYQLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWHKMDDSQVKPVSLEKVLSKCAYM 694
Query: 205 VIY 207
+ Y
Sbjct: 695 LFY 697
>gi|413952907|gb|AFW85556.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 903
Score = 82.4 bits (202), Expect = 1e-13, Method: Composition-based stats.
Identities = 72/245 (29%), Positives = 108/245 (44%), Gaps = 51/245 (20%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL--------------- 56
+G + P I+ L+ I+ F R ED+HE ++ L+E +H+ L
Sbjct: 149 TGKIVTPFRIVKNLRCISRTFRNSRQEDAHELMVNLLESMHKCCLPSGVSTESQSAYDKS 208
Query: 57 ---KVISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVR-DN 94
K+ G SN L+LSL+I + ++L AL F E L
Sbjct: 209 LVHKIFGGRLRSQVKCTRCLHCSNKFDPFLDLSLEIAKATTLVRALENFTEDELLDEGQK 268
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC--LKISCAVQVPLYLEFGKFMH- 151
Y+CE+C K A K+ +I+K P V + LKRF+ KI V L+ F+
Sbjct: 269 EYECERCRQKVVAKKRLTIDKAPNVLTIHLKRFSPFNPREKIDKKVDFQSILDLKPFVSD 328
Query: 152 -----CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV----QASNLQQVTNA 202
+ +L ++H G S+ SGHY C TSSG +H D V +A L+Q A
Sbjct: 329 SKGTDFKYSLYGVLVHTGWSTQSGHYYCYVRTSSGMWHNLDDKEVRQVREADVLKQ--KA 386
Query: 203 YVVIY 207
Y++ Y
Sbjct: 387 YMLFY 391
>gi|409079510|gb|EKM79871.1| hypothetical protein AGABI1DRAFT_23476, partial [Agaricus bisporus
var. burnettii JB137-S8]
gi|426192538|gb|EKV42474.1| hypothetical protein AGABI2DRAFT_53097, partial [Agaricus bisporus
var. bisporus H97]
Length = 309
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/228 (28%), Positives = 97/228 (42%), Gaps = 43/228 (18%)
Query: 23 NKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------------KVISG--- 61
+L+ IA H R EDSHEFL Y I+ + +S L K+ G
Sbjct: 80 GRLQTIAKHMRRGRQEDSHEFLRYAIDAMQKSCLAGFPPKAEAKLGEATWVHKIFGGRLR 139
Query: 62 ---------------SNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTE 106
L+LSLDI + SL EAL F + ++L + Y+CEKC
Sbjct: 140 SRVSCQNCDHNSDTFDRILDLSLDIMRADSLKEALRSFISPDFLKGADKYKCEKCKKHVN 199
Query: 107 ATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMHCRR-----NLVSAVI 161
A K+F+I + P V + LKRF+ L KI V +L +M + +L +
Sbjct: 200 AEKRFTIHEAPSVLTVHLKRFSPLGRKIGHHVIYDEHLNLQPYMSKGQYGFTYSLYGVIC 259
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVT--NAYVVIY 207
H G SGHY + SG ++ D+ + V+ AY++ Y
Sbjct: 260 HAGGGPNSGHYFAFVKSRSGRWYEMNDEMASPISGPPVSKKTAYILFY 307
>gi|357153956|ref|XP_003576621.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like
[Brachypodium distachyon]
Length = 959
Score = 82.4 bits (202), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 69/243 (28%), Positives = 110/243 (45%), Gaps = 49/243 (20%)
Query: 14 SAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK---------------- 57
S + P I++ L I F + ED+HEFL Y I+ I R+ +K
Sbjct: 482 SPLSPTGILSHLHDIGSSFGLGKEEDAHEFLRYAIDTIQRASMKEAEKNGVGKLAEETTL 541
Query: 58 -------------------VISGSNN--LELSLDIY-QLSSLDEALGQFFAKEYLVRDNL 95
V SG L+L+++I +S+L+EAL QF + E L DN
Sbjct: 542 MQLMFGGFVRSQIKCTKCQVSSGQCERILDLTVEIDGDISTLEEALHQFTSTEVLDGDNK 601
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY-LCLKISCAVQVPLYLEFGKFMHCRR 154
Y C +C A K+ +I + P + + LKR+ KI+ A+ P L +M
Sbjct: 602 YHCSRCNSYERAKKKLTIYEAPNILTIALKRYQTGSSGKINKAISFPECLNLSSYMSTTN 661
Query: 155 N------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYV 204
+ L + V+HH +++FSGHY C S +H D +V++ +L++V AY+
Sbjct: 662 DYSPVYRLYAVVVHHDVQNAAFSGHYVCYVKDSHEKWHEMDDRQVKSVSLEKVLTKCAYM 721
Query: 205 VIY 207
+ Y
Sbjct: 722 LFY 724
>gi|308808989|ref|XP_003081804.1| putative ubiquitin-specific protease (ISS) [Ostreococcus tauri]
gi|116060271|emb|CAL55607.1| putative ubiquitin-specific protease (ISS) [Ostreococcus tauri]
Length = 688
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 67/254 (26%), Positives = 114/254 (44%), Gaps = 58/254 (22%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS----------- 60
SG I P ++ ++ ++ F R ED+HE L++ +H+ ++++
Sbjct: 182 SGRTIAPTAVVKNMRALSKTFRKGRQEDAHELARCLLDAMHKKCVELVKPKISPNSARGE 241
Query: 61 ---------------------GSNN------LELSLDIYQLSSLDEALGQFFAKEYLVRD 93
G N+ L+LSL++ + S+ A F E L D
Sbjct: 242 TSFVWKVFGGKLRSRVNCKTCGRNSETFDPFLDLSLEVGRAKSVLGAFKLFTHTEILDGD 301
Query: 94 NLYQCEKCGYK------TEATKQFSIEKPPIVFILLLKRFNYLCL---KISCAVQVPLYL 144
N Y+CE T+A+KQF++++ P V + LKRF Y+ K+S V+ PL L
Sbjct: 302 NKYKCEGKNPGQSKPHFTKASKQFTVDQAPNVLAVQLKRFAYVPFGRGKLSHFVEYPLVL 361
Query: 145 EFGKFMHCR-RN--------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
+ ++ RN L ++H GSSS SGHY C T++G++ D+ V + +
Sbjct: 362 DVTPYLSDEDRNSKNRAVYDLYGVLVHAGSSSNSGHYYCFVKTATGTWCEMDDESVSSVS 421
Query: 196 LQQV--TNAYVVIY 207
+ V AY++ Y
Sbjct: 422 EKTVLKQQAYLLFY 435
>gi|351702295|gb|EHB05214.1| Ubiquitin carboxyl-terminal hydrolase 17 [Heterocephalus glaber]
Length = 491
Score = 82.0 bits (201), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 103/226 (45%), Gaps = 36/226 (15%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE--------------------GIHRSYLK 57
P +I L + F + ED+HEFL+++++ G RS +K
Sbjct: 106 PGRVIQPLHTLIAAFHRQKQEDAHEFLMFIVDAMQQAELHSEDRELMHHIFGGYWRSQIK 165
Query: 58 VI-SGSNN------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQ 110
+ GS + L+++LDI S+ +AL + A E L DN Y C C K ATK
Sbjct: 166 CLHCGSTSDTFDPYLDITLDIKAAQSVKQALTRSIAPEELSGDNAYHCSVCLQKMPATKT 225
Query: 111 FSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRR------NLVSAVIHH 163
S+ V IL+LKRF ++ K + VQ L+ +M + L + +IH
Sbjct: 226 MSLHTSSEVLILVLKRFSDFTGEKFAKHVQYSECLDMQPYMSEQNRGPLLYTLYAVLIHA 285
Query: 164 GSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
GS+ SGHY G ++ D++V A + + V +AYV+ Y
Sbjct: 286 GSTCHSGHYFSYVKAGDGRWYQMNDNKVTACDTRCVLAQDAYVLFY 331
>gi|443706691|gb|ELU02606.1| hypothetical protein CAPTEDRAFT_165719 [Capitella teleta]
Length = 515
Score = 81.6 bits (200), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/287 (27%), Positives = 113/287 (39%), Gaps = 81/287 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
+RKTL A S +AI PE + + + + F Y+ +D+HEF+ YL++ +H + +I
Sbjct: 212 LRKTLVALWQGSKAAISPESLFSVIWKVVPRFRGYQQQDAHEFMRYLLDRLHTELMTLIP 271
Query: 61 ----------------GSNN-----------------------------LELSLDIYQ-- 73
G ++ L++SLDI
Sbjct: 272 YNATVRPNSPYVGSPLGKSSVVTAIFGGILQSEVNCLICGMESKKHDPFLDISLDIPSKF 331
Query: 74 ------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFI 121
+ L + L F E L LY C C + +TK+F I + P V
Sbjct: 332 TCKTPNPKNGEIVCDLSDCLSSFTDVEELEDTELYMCANCKCRQRSTKKFWIRRLPNVLC 391
Query: 122 LLLKRF---NYLCLKISCAVQVPLY-LEFGKFM----HCRRN-----------LVSAVIH 162
L LKRF YL +K+ + PL LE FM H RN L + V+H
Sbjct: 392 LHLKRFRWSTYLRVKVDTHINFPLRGLEMNHFMLDNLHETRNSSASGSQSKYDLAAVVVH 451
Query: 163 HGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVT--NAYVVIY 207
HGS + SGHY G YH F D V + + V AY++ Y
Sbjct: 452 HGSGAGSGHYTSYAVHEGGWYH-FNDSSVTQCDEETVAKCKAYILFY 497
>gi|67478714|ref|XP_654739.1| ubiquitin carboxyl-terminal hydrolase family protein [Entamoeba
histolytica HM-1:IMSS]
gi|56471811|gb|EAL49353.1| ubiquitin carboxyl-terminal hydrolase family protein [Entamoeba
histolytica HM-1:IMSS]
gi|449702725|gb|EMD43311.1| ubiquitin carboxylterminal hydrolase family protein [Entamoeba
histolytica KU27]
Length = 584
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 106/241 (43%), Gaps = 39/241 (16%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
+ + + ++ + P + LK ++ + Y+ ED+ EF L L++ +H + +
Sbjct: 109 LERIMKEAFEKNNQPLKPIVFEKNLKKLSSSLQRYQQEDATEFYLLLLDHLHEAI--IGK 166
Query: 61 GSNNLE-------------------------------LSLDIYQLSSLDEALGQFFAKEY 89
G N + L ++I + +L+ QFF KE
Sbjct: 167 GKNKISAISSIFHVELVSRITCYNCTRFNDHDEHFSVLPIEITKQKTLESGFDQFFKKEM 226
Query: 90 LVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKF 149
+ Y CEKC K+ +K + ++ P + + LKRF + KI+ V PL L K+
Sbjct: 227 ISH---YHCEKCNTKSNVSKYYFFKRLPWILPIQLKRFTWDEKKINGKVAFPLQLNISKY 283
Query: 150 -MHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVI 206
M +L + V+H G + FSGHY T SG + F D+ V+ +++ V AY++
Sbjct: 284 GMDGLYDLYAIVVHLGKTKFSGHYISYCKTPSGGWFRFDDEEVKPVSIKVVLQEEAYMLF 343
Query: 207 Y 207
Y
Sbjct: 344 Y 344
>gi|356497712|ref|XP_003517703.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Glycine
max]
Length = 927
Score = 81.6 bits (200), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 71/266 (26%), Positives = 123/266 (46%), Gaps = 49/266 (18%)
Query: 9 QAESG-SAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNL-- 65
+A+ G S + P I++K+ I H + ED+HEFL ++ + LK + S+ L
Sbjct: 466 KAKEGISPLSPIGILSKIHKIGSHLGRGKEEDAHEFLRCAVDTMQSVCLKEVGVSSPLAE 525
Query: 66 ---------------------------------ELSLDIY-QLSSLDEALGQFFAKEYLV 91
+L+++I + +L+EALGQF A E L
Sbjct: 526 ETTLVGYTFGGYLRSKIKCLRCLGKSERYERMMDLTVEIDGDIGTLEEALGQFTAPEILD 585
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFM 150
+DN Y C +C +A K+ ++ + P + ++LKRF K++ +VQ P L +M
Sbjct: 586 KDNKYNCSRCKTYEKARKKLTVLEAPNILTIVLKRFQSGNFEKLNKSVQFPEVLNMAPYM 645
Query: 151 HCRRN------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--T 200
++ L + V+H +++FSGHY C G + D RV+ L +V
Sbjct: 646 SGTKDKSPLYSLYAVVVHLDIMNAAFSGHYVCYVKNIQGEWFRTDDSRVEPVELSRVLSE 705
Query: 201 NAYVVIYEL-LPSSLHHLNSSLHSSS 225
AY+++Y P L ++S++ SS+
Sbjct: 706 RAYMLLYARHSPKPLGLVSSNVISSA 731
>gi|345781712|ref|XP_854129.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 81.3 bits (199), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 60/188 (31%), Positives = 94/188 (50%), Gaps = 17/188 (9%)
Query: 36 RPEDSHEFLLYLIEGIHRSYLKVI--SGSNN-----LELSLDIYQLSSLDEALGQFFAKE 88
RP+DS + L EG RS ++ + G ++ L++SLDI S+ +AL Q E
Sbjct: 187 RPQDS-TLIQQLFEGYWRSQIQCLHCQGISSTLEPYLDISLDIGDAHSVSQALEQLVKPE 245
Query: 89 YLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFG 147
L +N Y C KC K A+K ++ P V IL+L+RF+ L K++ VQ P L+
Sbjct: 246 LLEGENAYHCRKCLEKVPASKVLTLHTSPKVLILVLRRFSDLTGNKMTKEVQYPERLDMQ 305
Query: 148 KFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV-- 199
++ +R L + ++H G S SGHY C +G ++ D +V A ++
Sbjct: 306 HYLSEQRAGPLVYVLYAVLVHAGRSCHSGHYFCFVKAGNGQWYKMDDAKVSACDVTCALR 365
Query: 200 TNAYVVIY 207
AYV+ Y
Sbjct: 366 QPAYVLFY 373
>gi|348560035|ref|XP_003465820.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Cavia
porcellus]
Length = 435
Score = 81.3 bits (199), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 65/224 (29%), Positives = 102/224 (45%), Gaps = 44/224 (19%)
Query: 28 IAHHFEYYRPEDSHEFLLYLIEGIH----------------------------RSYLKVI 59
IA HF + ED+HEFL Y ++ + RS +K +
Sbjct: 135 IASHFRFGNQEDAHEFLQYTLDAMQEACLQGSYELDRHTQATTLIYQIFGGYLRSRVKCL 194
Query: 60 S--GSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFS 112
+ G ++ L+++L+I + S++EAL QF E L +N Y+C KC A+K S
Sbjct: 195 NCRGVSDTFDLYLDVTLEIQDVRSVNEALAQFVKPEQLEGENCYKCSKCNSMVPASKSLS 254
Query: 113 IEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMH------CRRNLVSAVIHHGS 165
I +P V L LKRF N KI+ V+ P +L +M + +L + ++H GS
Sbjct: 255 IHRPSNVLTLSLKRFSNCTGSKIAKIVKYPEHLNIRAYMSQPSGEAMQYSLYAVLVHTGS 314
Query: 166 SSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
GHY S+G ++ D V S++ V AY++ Y
Sbjct: 315 KCCVGHYFSYVKASNGLWYQMNDFMVSPSDISSVLSQQAYILFY 358
>gi|209876007|ref|XP_002139446.1| ubiquitin carboxyl-terminal hydrolase domain-containing protein
[Cryptosporidium muris RN66]
gi|209555052|gb|EEA05097.1| ubiquitin carboxyl-terminal hydrolase domain-containing protein
[Cryptosporidium muris RN66]
Length = 757
Score = 80.9 bits (198), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 107/270 (39%), Gaps = 75/270 (27%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRS-------------YLK 57
+S AI P ++ KLI F +D+HEFL Y +EG+H++ L
Sbjct: 172 KSQRAIAPNILRCAQKLIWRKFRIGIMQDAHEFLRYFLEGLHKASVPKNLQSDDIFRKLN 231
Query: 58 VISGSNN-----------------------------LELSLDIYQLSSLDEALGQFFAKE 88
I S +++ LDI +SSL+ A F KE
Sbjct: 232 PIDTSTTYIGQLFCGFFRSQIVCFSCLYMSNTYDPFMDIPLDIVGVSSLENAFSIFTKKE 291
Query: 89 YLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF--------------------- 127
YL N Y+C KC K++A+K+ IEK P + + LKRF
Sbjct: 292 YLRGANQYKCPKCEKKSDASKEVLIEKLPPLLTIQLKRFSFIGHGNRKPYKSIKYNEVLD 351
Query: 128 --NYLCLKISCAVQVPLYLEFGKFMHCRR----NLVSAVIHHGSSSFSGHYNCIGSTSSG 181
+Y+ K +C QV Y CR+ +L S V H G S GHY +
Sbjct: 352 MSSYMTTKNTCNSQV--YTPDNSLDTCRQSFIYDLWSVVCHSGGSLSGGHYYTYAKGLNN 409
Query: 182 SYHYFGDDRVQASN----LQQVTNAYVVIY 207
++ F D+ V+ S L + AY++ Y
Sbjct: 410 QWYCFNDETVRISKSSEVLSETIGAYLLFY 439
>gi|213402519|ref|XP_002172032.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
japonicus yFS275]
gi|212000079|gb|EEB05739.1| ubiquitin carboxyl-terminal hydrolase [Schizosaccharomyces
japonicus yFS275]
Length = 441
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/233 (28%), Positives = 101/233 (43%), Gaps = 20/233 (8%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M K + + SA P I + LK+IA HF YR ED+HEF+ YLI+ +S L+
Sbjct: 182 MMKAYPSKGKKRASAFKPTGIQSMLKVIASHFRPYRQEDAHEFMRYLIDSWQKSCLQSFK 241
Query: 61 G----SNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEAT------KQ 110
S L I+ ++ L + C + T KQ
Sbjct: 242 NLDHPSRETSLIHRIFGGPAVHTHLCSTCHSRRTCTTSSSHCPSTVARNCKTLGGMLQKQ 301
Query: 111 FSIEKPPIVFILLLKRFNYLCL---KISCAVQVPLYLEFGKFMH-----CRRNLVSAVIH 162
++ + P L LKRF + KI+ V P L+ G FM C L ++H
Sbjct: 302 MTVYRAPNYLTLHLKRFTFNSFHSHKITKHVAYPELLDLGPFMSDANRACVYELCGVLVH 361
Query: 163 HGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIYELLPSS 213
G S+ SGHY +SSG++ F DD V +++ +V AY+++Y P +
Sbjct: 362 AGGSTRSGHYYSFCKSSSGTWLKFDDDFVSNTSIDRVLSQQAYILLYRRKPGA 414
>gi|335302607|ref|XP_003359505.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Sus scrofa]
Length = 517
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 102/223 (45%), Gaps = 33/223 (14%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHR--------------------SYLK 57
P +I K + F +R ED+HEFL++ ++ + R L+
Sbjct: 139 PGDVIQPRKDLVASFHRHRQEDAHEFLMFALDAMQRCPSEDTLIQQIFGGCWRSQIQCLR 198
Query: 58 VISGSNN----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSI 113
+ S+ L+++LDI S+++AL + E L +N Y C C K ATK+ ++
Sbjct: 199 CLGVSDTFDPYLDVTLDITAAQSVEQALRELVKAEKLDGENAYHCGVCLRKGPATKRLTL 258
Query: 114 EKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRR------NLVSAVIHHGSS 166
+ V IL+LKRF + K+ V+ P +L+ ++ ++ L + ++H G +
Sbjct: 259 HRASKVLILVLKRFTDVTGDKMDKKVRYPEHLDLQPYLSVQKAGALDYELFAVLVHSGWT 318
Query: 167 SFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
GHY C +G ++ D +V A + +AYV+ Y
Sbjct: 319 CHQGHYFCYIRAGNGWWYRMDDSKVTACDTASALSQSAYVLFY 361
>gi|348550615|ref|XP_003461127.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Cavia
porcellus]
Length = 391
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 104/234 (44%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH------------------------- 52
P I + +I HF + ED+HEFL Y ++ +
Sbjct: 156 PGDAIKPIAVITSHFRFGNQEDAHEFLQYTLDAMQKACLQGSYELDRHTQATTLIYQIFG 215
Query: 53 ---RSYLKVIS--GSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
RS +K ++ G ++ L+++L+I + S++EAL QF E L +N Y+C KC
Sbjct: 216 GYLRSRVKCLNCRGVSDTFDLYLDVTLEIQDVRSVNEALAQFVKPEQLEGENCYKCSKCN 275
Query: 103 YKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMH------CRRN 155
A+K SI +P V L LK F N KI+ V+ P +L +M + +
Sbjct: 276 SMVPASKSLSIHRPSNVLTLTLKGFSNCTGSKIAKIVKYPEHLNIRAYMSQPSGEAMQYS 335
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H GS GHY S+G ++ D V S++ V AY++ Y
Sbjct: 336 LYAVLVHTGSKCCVGHYFSYVKASNGLWYQMNDFMVSPSDISSVLSQQAYILFY 389
>gi|145351758|ref|XP_001420231.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144580465|gb|ABO98524.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 316
Score = 80.5 bits (197), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 67/256 (26%), Positives = 113/256 (44%), Gaps = 63/256 (24%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS----------- 60
SG I P ++ L+ ++ F R ED+HE L++ +H+ ++V+
Sbjct: 61 SGRTIAPTALVKNLRALSKTFRKGRQEDAHELARCLLDAMHKKCVEVVKPKISPNSARAE 120
Query: 61 ---------------------GSNN------LELSLDIYQLSSLDEALGQFFAKEYLVRD 93
G N+ L+LSL++ + S+ A F E L D
Sbjct: 121 TSFVWKVFGGRLRSQVNCKTCGRNSETFDPFLDLSLEVGRAKSVLGAFKMFTHTEVLDGD 180
Query: 94 NLYQCEKCGYK-----TEATKQFSIEKPPIVFILLLKRFNYLCL---KISCAVQVPLYLE 145
N Y+CE T+A+KQF++ + P V L LKRF Y+ K++ V+ PL L+
Sbjct: 181 NKYRCEGKSANSKSHLTKASKQFTVNQAPNVLALQLKRFAYVPFGRGKLNHFVEYPLELD 240
Query: 146 F------------GKFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
GK ++ +L ++H G+SS SGHY C ++G++ DD + +
Sbjct: 241 ITPYTSDEGLTSRGKAVY---DLYGVLVHAGNSSNSGHYYCFVKVATGTWCLMDDDEITS 297
Query: 194 SNLQQV--TNAYVVIY 207
+ + V AY++ Y
Sbjct: 298 VSEKVVLKQQAYLLFY 313
>gi|356509862|ref|XP_003523663.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 742
Score = 80.1 bits (196), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 68/262 (25%), Positives = 118/262 (45%), Gaps = 53/262 (20%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--------- 62
S A P I+++L I+ Y R ED+HEF+ + I+ + L G
Sbjct: 236 SSQAFSPMNILSRLPNISGTLGYGRQEDAHEFMRFSIDAMQSVCLDEFGGEKVVPPRNQE 295
Query: 63 -----------------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLVR 92
N ++L+++I+ +SL+E L QF AKE+L
Sbjct: 296 TTLIQHIFGGHLQSEVICTECEKNSNQYENMMDLTVEIHGDAASLEECLDQFTAKEWLHG 355
Query: 93 DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMH 151
DN+Y+C+ C +A K+ ++++ P + + LKRF K++ V P L+ +M
Sbjct: 356 DNMYKCDGCKGYVKAWKRLTVKQAPNILTIALKRFQSGRFGKLNKRVTFPETLDLSPYMS 415
Query: 152 CRRN------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TN 201
+ L + V+H ++SF GHY C G+++ D +V + L++V
Sbjct: 416 EVGDGSDIYKLYAVVVHIDMLNASFFGHYICYIKDFCGNWYRIDDWKVSSVELEEVLSQG 475
Query: 202 AYVVIYELL---PSSLHHLNSS 220
AY+++Y + PS L + SS
Sbjct: 476 AYMLLYSRVNARPSGLQSIESS 497
>gi|300681222|sp|Q7M764.2|U17L2_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17;
Short=USP17; AltName: Full=Deubiquitinating enzyme
17-like protein 2; AltName: Full=Deubiquitinating
protein 3; Short=DUB-3; AltName: Full=Deubiquitinating
protein 6; AltName: Full=Ubiquitin carboxyl-terminal
hydrolase 17-like protein 2; AltName: Full=Ubiquitin
thioesterase 17-like protein 2; AltName:
Full=Ubiquitin-specific-processing protease 17-like
protein 2
Length = 540
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 102/231 (44%), Gaps = 44/231 (19%)
Query: 21 IINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN---------------- 64
++ +++ F ++ ED+HEFL++ +E +H S L+V S+
Sbjct: 149 VMKPSQILTSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSDPTPQDTSPIHDIFGGWW 208
Query: 65 -------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKT 105
L++ LDI S+++AL E L+ +N Y C +C K
Sbjct: 209 RSQIKCLHCQGTSHTFDPFLDVPLDISSAQSVNQALWDTGKSEELLGENAYYCGRCRQKM 268
Query: 106 EATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRRN------LVS 158
A+K + P V +L+LKRF+ + K+ V P +L+ ++ L +
Sbjct: 269 PASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVSYPEFLDLKPYLSEPTGGPLPYALYA 328
Query: 159 AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
++H G++S SGHY C G ++ D +V ++ V NAYV+ Y
Sbjct: 329 VLVHDGATSNSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFY 379
>gi|379698859|ref|NP_001243902.1| ubiquitin carboxyl-terminal hydrolase 17 [Mus musculus]
Length = 540
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 102/231 (44%), Gaps = 44/231 (19%)
Query: 21 IINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN---------------- 64
++ +++ F ++ ED+HEFL++ +E +H S L+V S+
Sbjct: 149 VMKPSQILTSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSDPTPQDTSPIHDIFGGWW 208
Query: 65 -------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKT 105
L++ LDI S+++AL E L+ +N Y C +C K
Sbjct: 209 RSQIKCLHCQGTSHTFDPFLDVPLDISSAQSVNQALWDTGKSEELLGENAYYCGRCRQKM 268
Query: 106 EATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRRN------LVS 158
A+K + P V +L+LKRF+ + K+ V P +L+ ++ L +
Sbjct: 269 PASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVSYPEFLDLKPYLSEPTGGPLPYALYA 328
Query: 159 AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
++H G++S SGHY C G ++ D +V ++ V NAYV+ Y
Sbjct: 329 VLVHDGATSNSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFY 379
>gi|242040109|ref|XP_002467449.1| hypothetical protein SORBIDRAFT_01g028253 [Sorghum bicolor]
gi|241921303|gb|EER94447.1| hypothetical protein SORBIDRAFT_01g028253 [Sorghum bicolor]
Length = 306
Score = 80.1 bits (196), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 67/241 (27%), Positives = 106/241 (43%), Gaps = 48/241 (19%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN------- 64
SGS+ PE+ IN+LK I+ F+ +D+ EFL L++ + + S +
Sbjct: 54 SGSSFYPEIFINRLKSISSDFKSGVQQDAQEFLRCLLDKLDEDSIAPRSSEESSTTKEGS 113
Query: 65 -----------------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNL 95
L+LSLD+ + +L +AL Q F L++D
Sbjct: 114 VVKEIFRGCLKSQLRCPECDRCSDKSEPFLDLSLDLNMVETLMDAL-QSFTNTELIKD-- 170
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMHCRRN 155
+ C+ C + K F IE+ P V ++ LKRF KI V+ PL L+ FM +
Sbjct: 171 FMCDGCKSRVSMEKHFKIEQAPEVLVIHLKRFTNSESKIWDKVKYPLELDINSFMSSSDD 230
Query: 156 LVSA-------VIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV-QASNLQQVTN-AYVVI 206
+ + V+ H + SGHY C +S ++ F DD+V Q S + N AY++
Sbjct: 231 VSCSFKYDLYGVVEHLGAYGSGHYVCYIRSSEADWYKFNDDKVYQCSVDSALENAAYLLF 290
Query: 207 Y 207
Y
Sbjct: 291 Y 291
>gi|41019553|tpe|CAD66057.1| TPA: mouse deubiquitinating enzyme 6 [Mus musculus]
Length = 505
Score = 79.7 bits (195), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 102/231 (44%), Gaps = 44/231 (19%)
Query: 21 IINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN---------------- 64
++ +++ F ++ ED+HEFL++ +E +H S L+V S+
Sbjct: 114 VMKPSQILTSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSDPTPQDTSPIHDIFGGWW 173
Query: 65 -------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKT 105
L++ LDI S+++AL E L+ +N Y C +C K
Sbjct: 174 RSQIKCLHCQGTSHTFDPFLDVPLDISSAQSVNQALWDTGKSEELLGENAYYCGRCRQKM 233
Query: 106 EATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRRN------LVS 158
A+K + P V +L+LKRF+ + K+ V P +L+ ++ L +
Sbjct: 234 PASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVSYPEFLDLKPYLSEPTGGPLPYALYA 293
Query: 159 AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
++H G++S SGHY C G ++ D +V ++ V NAYV+ Y
Sbjct: 294 VLVHDGATSNSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFY 344
>gi|414869933|tpg|DAA48490.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 973
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/243 (27%), Positives = 107/243 (44%), Gaps = 50/243 (20%)
Query: 15 AIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH---------------------- 52
A+ P I++ L I F + ED+HEFL Y I+ +
Sbjct: 521 ALSPTGILSHLNDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKGGVLQSAEETTLV 580
Query: 53 --------RSYLKVIS---GSNNLELSLDIY-----QLSSLDEALGQFFAKEYLVRDNLY 96
RS +K S E LD+ +SSL EAL +F + E L +N Y
Sbjct: 581 QLIFGGYLRSKIKCSRCHVSSEQCEPMLDLTVEIDGDISSLGEALVRFTSTEVLDGENKY 640
Query: 97 QCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN 155
C +C A K+ +IE+ P + + LKR+ KIS A++ P L ++M+ +
Sbjct: 641 HCSRCKSYERAKKKLTIEEAPNILTIALKRYQSGKFGKISKAIRFPETLNLARYMNPDTD 700
Query: 156 LVSA-------VIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYV 204
+S V+HH +++FSGHY C + G + D +V+ +L V + AY+
Sbjct: 701 DISPVYSLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWFKADDSQVKPVSLDNVMSKCAYM 760
Query: 205 VIY 207
++Y
Sbjct: 761 LLY 763
>gi|449019625|dbj|BAM83027.1| hypothetical protein, conserved [Cyanidioschyzon merolae strain
10D]
Length = 500
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 70/262 (26%), Positives = 106/262 (40%), Gaps = 58/262 (22%)
Query: 3 KTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK----- 57
+ L + +A+ P II L I + R ED+HEFL +L+E I RS +
Sbjct: 185 RQLLVVRPSGTNAVAPTEIIRNLPAICRRYRVGRQEDAHEFLRFLLESIARSCSRRGERR 244
Query: 58 -----------VISGSNN--------------------------------LELSLDIYQL 74
V S N+ L+LSLD Q
Sbjct: 245 LPSQQVSSDELVASDCNHGTGWITRIFGGLLRSRVICRTCQHKSYRTERFLDLSLDFRQS 304
Query: 75 SSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKI 134
+S+ + L F A E L N Y C C ++A KQ I + P+V L LKRF+ L K+
Sbjct: 305 ASISKCLEHFAATELLAGRNRYDCAACHGYSDAEKQIRIRQAPVVLTLHLKRFHAL-RKL 363
Query: 135 SCAVQVPLYLEFGKFMH-------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFG 187
S V+ +L+ +M L + ++H G S SGHY ++SG++
Sbjct: 364 SGVVRFSEWLDLRPYMAEEFVAGPVMYRLFAVIVHEGHSLSSGHYYAFVRSASGAWLRCD 423
Query: 188 DDRVQASNLQQV--TNAYVVIY 207
D+ + + V AY++ Y
Sbjct: 424 DEHLSRVGIGSVFAQQAYLLFY 445
>gi|147857493|emb|CAN82847.1| hypothetical protein VITISV_000504 [Vitis vinifera]
Length = 1142
Score = 79.7 bits (195), Expect = 1e-12, Method: Composition-based stats.
Identities = 68/254 (26%), Positives = 116/254 (45%), Gaps = 54/254 (21%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
++K ++ +G + P+ +++ L+ R ED+HE+++ L+E +H+ L
Sbjct: 346 IQKHVSRALQSTGRILAPKDLVSNLR-------NARQEDAHEYMVNLLETMHKCCLPSGV 398
Query: 57 --------------KVISG--------------SNN----LELSLDIYQLSSLDEALGQF 84
K+ G SN L+LSL+I++ SL +AL F
Sbjct: 399 PSESPSAYEKSLVHKIFGGLLRSQVKCMQCSYCSNKFDPFLDLSLEIFKADSLHKALMHF 458
Query: 85 FAKEYLVR-DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL--CLKISCAVQVP 141
A E L + YQC++C K +A KQ ++ K P V + LKRF KI V
Sbjct: 459 TATEQLDGGERQYQCQRCKQKVKALKQLTVHKAPYVLTIHLKRFGAHDPGQKIDKKVHFG 518
Query: 142 LYLEFGKFM------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
++ F+ + + L ++H G S+ SGHY C TS+G ++ D+RV +
Sbjct: 519 PTMDLKPFVSGSYEENLKYTLYGVLVHAGWSTHSGHYYCFVRTSTGMWYSLDDNRVVQVS 578
Query: 196 LQQVTN--AYVVIY 207
+ V + AY++ Y
Sbjct: 579 ERTVLDQKAYMLFY 592
>gi|224142061|ref|XP_002324377.1| predicted protein [Populus trichocarpa]
gi|222865811|gb|EEF02942.1| predicted protein [Populus trichocarpa]
Length = 489
Score = 79.7 bits (195), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 63/248 (25%), Positives = 111/248 (44%), Gaps = 50/248 (20%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS------- 62
++S P I+++L+ I + Y R ED+HEF+ + I+ + L G
Sbjct: 237 SQSALPFSPMNILSRLRNIGGNLGYGRQEDAHEFMRFAIDTMQSVCLDEFGGEKAVEPAS 296
Query: 63 -------------------------------NNLELSLDIY-QLSSLDEALGQFFAKEYL 90
N ++L+++I+ SL+E L QF KE+L
Sbjct: 297 QETTIIQHIFGGRLQSQVICTKCNKISNQFENMMDLTVEIHGDAESLEECLNQFTDKEWL 356
Query: 91 VRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKF 149
+N+Y+C+ C +A K+ +I++ P V + LKRF K++ V P L+ +
Sbjct: 357 HGENMYKCDGCNDYVKAWKRLTIQRAPNVLTIALKRFQSGRFGKLNKRVTFPETLDLSPY 416
Query: 150 MHCRRN------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV-- 199
M + + L + V+H ++SF GHY C G++H D +V + L +V
Sbjct: 417 MSEKGDGADVYKLYAVVVHVDMLNASFFGHYICYTKDFHGNWHRIDDSKVSSVELDEVLS 476
Query: 200 TNAYVVIY 207
AY+++Y
Sbjct: 477 QGAYMLLY 484
>gi|356518197|ref|XP_003527768.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 734
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 66/259 (25%), Positives = 116/259 (44%), Gaps = 53/259 (20%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--------- 62
S A P I+++L I+ Y R ED+HEF+ + I+ + L G
Sbjct: 228 SSQAFSPMNILSRLPNISGTLGYGRQEDAHEFIRFAIDAMQSVCLDEFGGEKVVPPKHQE 287
Query: 63 -----------------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLVR 92
N ++L+++I+ +SL+E L QF AKE+L
Sbjct: 288 TTLIQHIFGGHLQSEVICTECEKNSNQYENMMDLNVEIHGDAASLEECLDQFTAKEWLHG 347
Query: 93 DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMH 151
DN+Y+C+ C +A K+ ++++ P + + LKRF K++ V P L+ +M
Sbjct: 348 DNMYKCDGCKGYVKAWKRLTVKRAPNILTIALKRFQSGRFGKLNKRVTFPETLDLSPYMS 407
Query: 152 CRRN------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TN 201
+ L + V+H ++SF GHY C G+++ D +V + L++V
Sbjct: 408 EAGDGSDIYKLYAVVVHIDMLNASFFGHYICFIKDLCGNWYRIDDWKVSSVELEEVLSQG 467
Query: 202 AYVVIYELL---PSSLHHL 217
AY+++Y + PS L +
Sbjct: 468 AYMLLYSRVNARPSGLQSI 486
>gi|356525831|ref|XP_003531525.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Glycine
max]
Length = 641
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/242 (26%), Positives = 104/242 (42%), Gaps = 54/242 (22%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV---------ISGSNN---- 64
P I + +++ A +F R ED+HEFL Y+I+ H + L++ +G +
Sbjct: 90 PSKIQSCIRIFAENFRCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGAEANGGGDEAGG 149
Query: 65 -------------------------------LELSLDIYQLSSLDEALGQFFAKEYLVRD 93
+++SLD++ +SL +++ +FF E L +
Sbjct: 150 STVVKEIFGGALQSQVKCLCCGYESNKVDEIMDISLDVFHSNSLKDSMQKFFQPEVLDGN 209
Query: 94 NLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHC 152
N Y+C+ C A KQ SI + P + ++ LKRF L KI AV L FM C
Sbjct: 210 NKYKCDSCKKLVAAKKQMSILQAPNILVIQLKRFEGILGGKIDKAVAFEEVLVLSSFM-C 268
Query: 153 RRN--------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTNAYV 204
+ + L ++H G S SGHY + G ++ D V + LQ+V + V
Sbjct: 269 KASQDPQPEYKLFGTIVHSGYSPESGHYYAYIKDAMGRWYCCDDSCVTVATLQEVLSEKV 328
Query: 205 VI 206
I
Sbjct: 329 YI 330
>gi|422295802|gb|EKU23101.1| hypothetical protein NGA_0518320 [Nannochloropsis gaditana CCMP526]
Length = 526
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 67/240 (27%), Positives = 103/240 (42%), Gaps = 46/240 (19%)
Query: 14 SAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL----------------- 56
S I P+ I+ LK + HF R ED+HEFL +L++ + L
Sbjct: 229 SPISPKAIVGNLKALNRHFRVGRQEDAHEFLRHLLDALQSGCLQAARVKSNAPGRLAETT 288
Query: 57 ---KVISG------------------SNNLELSLDIY-QLSSLDEALGQFFAKEYLVRDN 94
++ G N L+LSL+I+ ++ L+EAL +F A E L R N
Sbjct: 289 FVHRIFGGYLRSQVRCTQCGHCSNTYDNFLDLSLEIHGKVGRLEEALARFTAVETLDRAN 348
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY--LCLKISCAVQVPLYLEF---GKF 149
++C C A K+ S P V + LKRF + K+S V P L G
Sbjct: 349 RWRCPACSQLVCAQKRLSFHTAPNVCTVQLKRFMFGSRSSKLSKNVAYPESLRLSLSGPE 408
Query: 150 MHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
R L ++H G+S GHY + ++G ++ D +V+ L V +AY++ Y
Sbjct: 409 GSARYRLAGVLVHAGASVNMGHYYSLVKAANGCWYEMDDAQVRQVGLPTVLHQHAYLLFY 468
>gi|413955111|gb|AFW87760.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 813
Score = 79.0 bits (193), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 64/249 (25%), Positives = 106/249 (42%), Gaps = 52/249 (20%)
Query: 8 CQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL----------- 56
C SGS+ PE+ +N LK I+ +F +D+ EFL L++ + +
Sbjct: 190 CMRLSGSSFYPEIFVNHLKSISSNFRSGVQQDAQEFLRCLLDKLDEDSIAPRFSEESSSS 249
Query: 57 -------------KVISGSNN------------------LELSLDIYQLSSLDEALGQFF 85
++ SG L+LSLD+ + +L +AL Q F
Sbjct: 250 EESSSTEEGSVVKEIFSGCLKSQLRCPECNHYSDKSEPFLDLSLDLNMVETLMDAL-QSF 308
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLE 145
L++D + C+ C + K F IE+ P V ++ LKRF KI V+ P+ L+
Sbjct: 309 TNTELIKD--FMCDGCKSRVNLEKHFKIEQAPEVLVIHLKRFTNFESKIRDKVKFPIELD 366
Query: 146 FGKFMHCRRNLVS-----AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVT 200
FM + + V+ H + SGHY C +S ++ F DD+V ++
Sbjct: 367 INSFMSSSDDTLQKYDLYGVVEHLGAYGSGHYVCYIRSSEADWYKFNDDKVCKCSVASAL 426
Query: 201 N--AYVVIY 207
+ AY++ Y
Sbjct: 427 DSAAYLLFY 435
>gi|301102127|ref|XP_002900151.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
gi|262102303|gb|EEY60355.1| ubiquitin-specific protease, putative [Phytophthora infestans
T30-4]
Length = 739
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 73/246 (29%), Positives = 112/246 (45%), Gaps = 52/246 (21%)
Query: 19 ELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK---VISGSNN----------- 64
EL++N ++ I+ F R EDSHEF L++ + RS L+ + S S++
Sbjct: 218 ELVMN-VRHISKSFRIGRQEDSHEFFRLLLDSMQRSCLRKAHIKSESHSAASTTFVYRMF 276
Query: 65 -----------------------LELSLDIYQ-LSSLDEALGQFFAKEYLVRDNLYQCEK 100
L+LSL+I + S+ AL F A E L N ++C
Sbjct: 277 GGKLKNHLKCAKCGFVSERFDDFLDLSLEISNGVHSVKGALRHFTAIEKLDERNAWKCSS 336
Query: 101 CGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFM--HC--RR-- 154
CG + A K SI + P V ++ LKRF+ + KI ++ P L+ M +C RR
Sbjct: 337 CGKPSRAEKGLSIAECPNVLMIQLKRFDLMFGKIKRHIEFPRSLDIASGMSKNCEDRRRG 396
Query: 155 ----NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY- 207
L + ++H G S+ GHY SSG ++ DD V+ +L V AY++ Y
Sbjct: 397 RTKYELHAVLVHAGFSTDCGHYYAFVKGSSGQWYEMNDDSVRWVSLDTVLQQKAYMLFYS 456
Query: 208 ELLPSS 213
+LP S
Sbjct: 457 RVLPPS 462
>gi|74140773|dbj|BAC40791.2| unnamed protein product [Mus musculus]
Length = 467
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 44/231 (19%)
Query: 21 IINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV---------------------- 58
I+ +++ F Y+ ED+HEFL++ +E +H S L+V
Sbjct: 115 IMKPSQILTSAFHKYQQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSPIHDIFGGWW 174
Query: 59 --------ISGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKT 105
G+++ L++ LDI S+++AL E L +N Y C +C K
Sbjct: 175 RSQIKCLLCQGTSDTYDPFLDVPLDISSAQSVNQALWDTEKSEELHGENAYYCGRCRQKM 234
Query: 106 EATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRR------NLVS 158
A+K + P V +L+LKRF+ + K+ V P +L+ ++ L +
Sbjct: 235 PASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVSYPEFLDLKPYLSQPTAGPLPYALYA 294
Query: 159 AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
++H G++ SGHY C G ++ D +V ++ V NAYV+ Y
Sbjct: 295 VLVHDGATCHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFY 345
>gi|299470394|emb|CBN80155.1| Ubiquitin-specific protease 16 [Ectocarpus siliculosus]
Length = 1055
Score = 79.0 bits (193), Expect = 2e-12, Method: Composition-based stats.
Identities = 68/244 (27%), Positives = 103/244 (42%), Gaps = 46/244 (18%)
Query: 15 AIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK---VISGSNN------- 64
AI P++++ L++I F R ED+HEFL +L++ + YLK V S + N
Sbjct: 149 AISPKVLVQNLRMIGRQFRQGRQEDAHEFLRHLLDKMVDCYLKRRGVKSSAPNRLAETTP 208
Query: 65 ----------------------------LELSLDIYQ-LSSLDEALGQFFAKEYLVRDNL 95
++LS+D+ + + S+D AL +F A E L N
Sbjct: 209 INRIFGGYLRSRLKCTKCGHCSDTFDPFMDLSMDLSRGVRSIDVALRRFVATERLGSGNE 268
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL--CLKISCAVQVPLYLEF---GKFM 150
++C C +A K S+ KPP +L LKRF + KI +Q L G
Sbjct: 269 WRCGGCKKPVQAEKSLSVFKPPNALVLQLKRFVFTRKASKIKDHIQFADVLNLSVSGPER 328
Query: 151 HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIYE 208
+L V+H G S SGHY + +G + D V + V AYV+ Y
Sbjct: 329 SALYDLTGVVVHAGGSMSSGHYYAYVRSCAGMWSRMDDCSVSKVKRETVLRDQAYVLFYT 388
Query: 209 LLPS 212
P+
Sbjct: 389 RRPA 392
>gi|194697876|gb|ACF83022.1| unknown [Zea mays]
Length = 495
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 107/243 (44%), Gaps = 50/243 (20%)
Query: 15 AIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK----------------- 57
A+ P I++ L I F + ED+HEFL Y I+ + +K
Sbjct: 43 ALSPTGILSHLNDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKGGVLQSAEETTLV 102
Query: 58 --VISG--------------SNNLELSLDIY-----QLSSLDEALGQFFAKEYLVRDNLY 96
+ G S E LD+ +SSL EAL +F + E L +N Y
Sbjct: 103 QLIFGGYLRSKIKCSRCHVSSEQCEPMLDLTVEIDGDISSLGEALVRFTSTEVLDGENKY 162
Query: 97 QCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN 155
C +C A K+ +IE+ P + + LKR+ KIS A++ P L ++M+ +
Sbjct: 163 HCSRCKSYERAKKKLTIEEAPNILTIALKRYQSGKFGKISKAIRFPETLNLARYMNPDTD 222
Query: 156 LVS-------AVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYV 204
+S V+HH +++FSGHY C + G + D +V+ +L V + AY+
Sbjct: 223 DISPVYSLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWFKADDSQVKPVSLDNVMSKCAYM 282
Query: 205 VIY 207
++Y
Sbjct: 283 LLY 285
>gi|219841872|gb|AAI45563.1| Usp-ps protein [Mus musculus]
Length = 540
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 44/231 (19%)
Query: 21 IINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV---------------------- 58
I+ +++ F Y+ ED+HEFL++ +E +H S L+V
Sbjct: 148 IMKPSQILTSAFHKYQQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSPIHDIFGGWW 207
Query: 59 --------ISGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKT 105
G+++ L++ LDI S+++AL E L +N Y C +C K
Sbjct: 208 RSQIKCLLCQGTSDTYDPFLDVPLDISSAQSVNQALWDTEKSEELHGENAYYCGRCRQKM 267
Query: 106 EATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRR------NLVS 158
A+K + P V +L+LKRF+ + K+ V P +L+ ++ L +
Sbjct: 268 PASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVSYPEFLDLKPYLSQPTAGPLPYALYA 327
Query: 159 AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
++H G++ SGHY C G ++ D +V ++ V NAYV+ Y
Sbjct: 328 VLVHDGATCHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFY 378
>gi|74206968|dbj|BAE33280.1| unnamed protein product [Mus musculus]
gi|187952153|gb|AAI39143.1| Ubiquitin specific peptidase, pseudogene (USP17 homolog) [Mus
musculus]
Length = 541
Score = 79.0 bits (193), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 59/231 (25%), Positives = 102/231 (44%), Gaps = 44/231 (19%)
Query: 21 IINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV---------------------- 58
I+ +++ F Y+ ED+HEFL++ +E +H S L+V
Sbjct: 149 IMKPSQILTSAFHKYQQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSPIHDIFGGWW 208
Query: 59 --------ISGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKT 105
G+++ L++ LDI S+++AL E L +N Y C +C K
Sbjct: 209 RSQIKCLLCQGTSDTYDPFLDVPLDISSAQSVNQALWDTEKSEELHGENAYYCGRCRQKM 268
Query: 106 EATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRR------NLVS 158
A+K + P V +L+LKRF+ + K+ V P +L+ ++ L +
Sbjct: 269 PASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVSYPEFLDLKPYLSQPTAGPLPYALYA 328
Query: 159 AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
++H G++ SGHY C G ++ D +V ++ V NAYV+ Y
Sbjct: 329 VLVHDGATCHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFY 379
>gi|356556930|ref|XP_003546773.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 25-like [Glycine
max]
Length = 652
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 104/243 (42%), Gaps = 55/243 (22%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK-------------------- 57
P I + +++ A +F R ED+HEFL Y+I+ H + L+
Sbjct: 90 PSKIQSCIRIFAENFRCGRQEDAHEFLRYVIDACHNTCLRLKKLRRKGAEANGGGGGDTG 149
Query: 58 -------VISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVR 92
+ G SN +++SLD++ +SL +++ +FF E L
Sbjct: 150 GGTVVKEIFGGALQSQVKCLCCGYESNKVDEIMDISLDVFHSNSLKDSMQKFFQPEVLDG 209
Query: 93 DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMH 151
+N Y+C+ C A KQ SI + P + ++ LKRF L KI AV L FM
Sbjct: 210 NNKYKCDSCKKLVAAKKQMSILQAPNILVIQLKRFEGILGGKIDKAVAFEEVLVLSSFM- 268
Query: 152 CRRN--------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTNAY 203
C+ + L ++H G S SGHY + G ++ D V + LQ+V +
Sbjct: 269 CKASQDPQPEYKLFGTIVHSGYSPESGHYYAYIKDAMGRWYCCDDSCVTVATLQEVLSEK 328
Query: 204 VVI 206
V I
Sbjct: 329 VYI 331
>gi|291408075|ref|XP_002720394.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 503
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 104/234 (44%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F R ED+HEFL++ ++
Sbjct: 115 PGDVIQPCQALAAAFHRNRQEDAHEFLVFTVDALKAAGLPGLMNVVGPKEDKSLSHQIFG 174
Query: 50 GIHRSYLKVIS--GSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G +S +K + G ++ L+++LDI S+ +AL Q E L +N Y+C C
Sbjct: 175 GYWKSQIKCLQCQGVSDTLDPYLDIALDIKTADSVQQALEQLVKPEELDGENAYECGICL 234
Query: 103 YKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRRN------ 155
KT A+K ++ V I +LKRF ++ KI+ VQ P L+ +M +
Sbjct: 235 KKTAASKTLVLQSSGNVLIFVLKRFSDFTGEKIARQVQYPECLDMRPYMSQQSGRPLEYV 294
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
L +A++H G GHY C +G ++ D +V A ++ V N AYV+ Y
Sbjct: 295 LYAALVHVGLRCQKGHYFCYVKAGNGHWYKMDDAKVTACDITSVLNQSAYVLFY 348
>gi|343427156|emb|CBQ70684.1| related to ubiquitin carboxyl-terminal hydrolase 36 [Sporisorium
reilianum SRZ2]
Length = 761
Score = 78.6 bits (192), Expect = 2e-12, Method: Composition-based stats.
Identities = 65/237 (27%), Positives = 98/237 (41%), Gaps = 47/237 (19%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS----------------- 60
P+ LK A R ED+HE+L +L+E + +S L S
Sbjct: 269 PKEFNRNLKAFAKPLRQGRQEDAHEYLRFLLEALQQSCLARASKSLKPDDPIRRTTFVQK 328
Query: 61 ---------------GSNN------LELSLDIYQ-LSSLDEALGQFFAKEYLVRDNLYQC 98
G N+ ++LSL++ + ++SL +A F AK++L Y+C
Sbjct: 329 MFGGKLRSRVTCHSCGHNSDTFDPFMDLSLEVRKGITSLTDAFRAFVAKDHLTGSEKYKC 388
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMHCRR---- 154
+KC K +ATKQF+IE P + LKRF K+S + L ++ R
Sbjct: 389 DKCKRKVDATKQFTIEAAPPALTVHLKRFTAFGGKVSRQINFDESLNIAPYLSVNRGPAR 448
Query: 155 -NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN---AYVVIY 207
L + V H+GS SGHY + SG + D V N AY++ Y
Sbjct: 449 YKLYAVVHHYGSGPNSGHYVASVRSPSGKWTRMDDSLVSEMGRSGPLNDQSAYILFY 505
>gi|145487085|ref|XP_001429548.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124396641|emb|CAK62150.1| unnamed protein product [Paramecium tetraurelia]
Length = 547
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 73/245 (29%), Positives = 112/245 (45%), Gaps = 49/245 (20%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------------- 49
A ++G+ I +L+ +LI + F+ + DS EFL Y IE
Sbjct: 299 AANKKAGAFIKIQLL---KQLIKNKFDPRQQHDSQEFLRYFIEQLTVEMQGQFKYDQPIT 355
Query: 50 -----GIHRSYLKVISGSNN-------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQ 97
G S +K + L+LSL + +L +LD+ L FFA+E L + YQ
Sbjct: 356 EIAFQGQMMSLIKCDQCNQQSTKFESFLDLSLSMNKLQTLDKCLRLFFAQEIL--SDHYQ 413
Query: 98 CEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC--LKISCAVQVPLYLEFGKF--MHCR 153
CE C +T A K++ I PP+ ++ LKRF +K++ V+ P+ L+ +F + +
Sbjct: 414 CENCCNETRAVKKYVIGTPPLYLMIHLKRFQVYPNRIKLNGHVRFPISLDVQEFCSIKAK 473
Query: 154 RNLVSAVIHHGSSSFSGHYNCIGSTSSGSY--------HYFGDDRVQASNLQQV--TNAY 203
L S ++H G+S GHY S Y +YF D +V Q V AY
Sbjct: 474 YKLRSIIVHQGTSE-RGHYVSFSSRQDQVYRQLLYYQWYYFDDHKVYLVTEQDVLQQQAY 532
Query: 204 VVIYE 208
V+IYE
Sbjct: 533 VLIYE 537
>gi|222640740|gb|EEE68872.1| hypothetical protein OsJ_27681 [Oryza sativa Japonica Group]
Length = 897
Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 72/267 (26%), Positives = 122/267 (45%), Gaps = 51/267 (19%)
Query: 15 AIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE-------------GIHR-----SYL 56
A+ P I++ L I F + ED+HEFL Y I+ G HR + +
Sbjct: 430 ALSPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRLHEETTLM 489
Query: 57 KVISG---------------SNNLELSLDIY-----QLSSLDEALGQFFAKEYLVRDNLY 96
++I G S E LD+ +SSL+ AL +F + E L DN Y
Sbjct: 490 QLIFGGYLRSKIRCTRCDATSEQHERILDLTVEIDGDISSLEGALERFTSTEVLDGDNKY 549
Query: 97 QCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN 155
+C +C A K+ +I + P V + LKR+ KI+ A++ P L ++M + +
Sbjct: 550 KCSRCKSHERAKKKLTISEAPNVLTIALKRYQSGKFGKINKAIRFPETLNLQRYMSPKAD 609
Query: 156 -------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYV 204
L + V+HH +++FSGHY C + G ++ D +V+ +L+ V + AY+
Sbjct: 610 DTSPVYSLYAVVVHHDIMNAAFSGHYVCYVKDTHGKWYKTDDSQVKPVSLENVMSKCAYM 669
Query: 205 VIY-ELLPSSLHHLNSSLHSSSPGSVE 230
++Y P + + +L + P V+
Sbjct: 670 LLYARCSPRAPSSVRPALMAQDPARVK 696
>gi|118388360|ref|XP_001027278.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila]
gi|89309048|gb|EAS07036.1| Ubiquitin carboxyl-terminal hydrolase family protein [Tetrahymena
thermophila SB210]
Length = 778
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/235 (27%), Positives = 102/235 (43%), Gaps = 45/235 (19%)
Query: 16 IIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL-----------------KV 58
+ P II ++ I F+ R +DSHE L L+E + +S L K+
Sbjct: 120 VQPRKIIQNMRYINKKFKLGRQDDSHELLRLLLESMQKSALDFKPKVDQKIEEATPIYKM 179
Query: 59 ISG--------------SNNLE----LSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEK 100
+G S N+E LSL+ + S+ ++ FF KE L +N Y+C K
Sbjct: 180 FAGKLKSQVECSVCNYRSENIEAFYDLSLECKE--SVQKSFELFFRKEKLEGNNKYRCSK 237
Query: 101 CGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMHCRR------ 154
C EA K + I + P V L +KRFN +KI+ Q P ++ K++
Sbjct: 238 CKKLVEAQKGYVIHQLPNVLTLQIKRFNNFMMKINTHTQFPAEIDISKYVQQANKKPEIY 297
Query: 155 NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTNA--YVVIY 207
+L +IH G GHY C S+ ++ D V + Q+V+ Y++ Y
Sbjct: 298 DLYGVLIHIGGGLHFGHYYCYVKNSNDMWYCMNDSSVSQRSFQEVSKERPYLLFY 352
>gi|301789131|ref|XP_002929987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Ailuropoda melanoleuca]
Length = 531
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 106/248 (42%), Gaps = 45/248 (18%)
Query: 5 LAACQAESGSAII-PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSN 63
L A QA A+ P +I L + F ++ ED+HEFL++ + + ++ L S+
Sbjct: 125 LCALQAHMTRALCHPGDVIRPLPRLLAAFHTHQQEDAHEFLMFTLGAMQQACLPEDKPSD 184
Query: 64 N-----------------------------------LELSLDIYQLSSLDEALGQFFAKE 88
L++SLDI S+ +AL Q E
Sbjct: 185 PQSEDATLIRQIFGGYWRSQIHCLHCQGISSTMDPYLDISLDIEAAQSVSQALEQLVKPE 244
Query: 89 YLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFG 147
L +N Y C C K A+K ++ P V IL+LKRF ++ K++ V P +L+
Sbjct: 245 KLDGENAYHCNTCLGKVPASKMLTLHTPSKVLILVLKRFSDFTGNKMAKDVHYPEHLDMQ 304
Query: 148 KFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV-- 199
++ +R L + ++H G S SGHY C +G ++ D +V A +
Sbjct: 305 PYLCEQRAGPLVYVLYAVLVHAGWSCHSGHYFCFVKAGNGQWYKMDDSKVTARDATCALS 364
Query: 200 TNAYVVIY 207
+AYV+ Y
Sbjct: 365 QHAYVLFY 372
>gi|115445271|ref|NP_001046415.1| Os02g0244300 [Oryza sativa Japonica Group]
gi|113535946|dbj|BAF08329.1| Os02g0244300 [Oryza sativa Japonica Group]
Length = 975
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 109/252 (43%), Gaps = 50/252 (19%)
Query: 6 AACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNL 65
A+ ESG + P I++ L+ I ED+HEFL +L+ + + L + G +
Sbjct: 493 ASTLRESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACLDGLGGEKQV 552
Query: 66 ELSL-------------------------------DIYQLS--------SLDEALGQFFA 86
E SL +I L+ SL +AL QF A
Sbjct: 553 EASLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTA 612
Query: 87 KEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLE 145
E L +N+Y+C +C +A KQ S+ + P + ++LKRF KI+ V P L+
Sbjct: 613 PEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQTGKYGKINKCVTFPDMLD 672
Query: 146 FGKFMHCRRN------LVSAVIHHGS--SSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQ 197
F+ + L + V+H + +SFSGHY G++ D VQA +L
Sbjct: 673 MVPFVTGAGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLN 732
Query: 198 QVTN--AYVVIY 207
QV + AY++ Y
Sbjct: 733 QVMSEGAYMLFY 744
>gi|168040440|ref|XP_001772702.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162675927|gb|EDQ62416.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 428
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 61/248 (24%), Positives = 108/248 (43%), Gaps = 51/248 (20%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISG--------- 61
E+ + P I+++++ I H Y + ED+HEF+ + I+ + + L G
Sbjct: 179 ETQNPFSPIRILSRIRSIGSHLGYGKQEDAHEFMRFAIDSMQSTCLDEFGGEKAVDPATQ 238
Query: 62 --------------------------SNNLELSLDIYQ-----LSSLDEALGQFFAKEYL 90
SN E +D+ + SL++A+ QF A E L
Sbjct: 239 ETTLIHHIFGGHLQSQVVKCMECHHESNRYESMMDLAVEIHGVVESLEDAIAQFTAAEML 298
Query: 91 VRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKF 149
DN Y+C++C A K+ ++ + P + + LKRF K++ V P L+ +
Sbjct: 299 DGDNKYKCDRCNAYVRAGKRLTVHEAPNILTIALKRFQSGKFGKLNKRVTFPKTLDMSPY 358
Query: 150 MHCRRN------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV-- 199
M + L + V+H ++SF GHY C S+G ++ D +V+ L++V
Sbjct: 359 MSGTNDDSPLYGLYAVVVHVDLLNASFFGHYICYVKDSNGVWYKIDDSKVKEVELEKVLA 418
Query: 200 TNAYVVIY 207
AY++ Y
Sbjct: 419 QKAYMLFY 426
>gi|417402232|gb|JAA47969.1| Putative ubiquitin carboxyl-terminal hydrolase 3 [Desmodus
rotundus]
Length = 520
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 116/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 222 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 281
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 282 GVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 341
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 342 LDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCRKKQKSTKKFWIQ 401
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E +C +L + V+
Sbjct: 402 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVV 461
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY + G + +F D V ++ V AY++ Y
Sbjct: 462 HHGSGVGSGHYTAY-AKHEGRWFHFNDSTVTLADEDTVVKAKAYILFY 508
>gi|6681237|ref|NP_031913.1| ubiquitin carboxyl-terminal hydrolase DUB-1 [Mus musculus]
gi|2501457|sp|Q61068.1|UBPW_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase DUB-1; AltName:
Full=Deubiquitinating enzyme 1; AltName: Full=Ubiquitin
thioesterase DUB-1; AltName:
Full=Ubiquitin-specific-processing protease DUB-1
gi|1302630|gb|AAC52532.1| DUB-1 [Mus musculus]
gi|148684794|gb|EDL16741.1| mCG66629 [Mus musculus]
Length = 526
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 102/240 (42%), Gaps = 50/240 (20%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV------------- 58
SG + P I+ F ++ ED+HEFL++ +E +H S L+V
Sbjct: 112 SGDVMKPSHILTSA------FHKHQQEDAHEFLMFTLETMHESCLQVHRQSKPTSEDSSP 165
Query: 59 -----------------ISGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLY 96
G+++ L++ LDI S+ +AL E L DN Y
Sbjct: 166 IHDIFGGWWRSQIKCLLCQGTSDTYDRFLDIPLDISSAQSVKQALWDTEKSEELCGDNAY 225
Query: 97 QCEKCGYKTEATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRRN 155
C KC K A+K + P V +++L RF+ + K+ V P +L+ ++
Sbjct: 226 YCGKCRQKMPASKTLHVHIAPKVLMVVLNRFSAFTGNKLDRKVSYPEFLDLKPYLSEPTG 285
Query: 156 ------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G++S SGHY C G ++ D +V ++ V NAYV+ Y
Sbjct: 286 GPLPYALYAVLVHDGATSHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFY 345
>gi|281345036|gb|EFB20620.1| hypothetical protein PANDA_020318 [Ailuropoda melanoleuca]
Length = 411
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 65/248 (26%), Positives = 106/248 (42%), Gaps = 45/248 (18%)
Query: 5 LAACQAESGSAII-PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSN 63
L A QA A+ P +I L + F ++ ED+HEFL++ + + ++ L S+
Sbjct: 125 LCALQAHMTRALCHPGDVIRPLPRLLAAFHTHQQEDAHEFLMFTLGAMQQACLPEDKPSD 184
Query: 64 N-----------------------------------LELSLDIYQLSSLDEALGQFFAKE 88
L++SLDI S+ +AL Q E
Sbjct: 185 PQSEDATLIRQIFGGYWRSQIHCLHCQGISSTMDPYLDISLDIEAAQSVSQALEQLVKPE 244
Query: 89 YLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFG 147
L +N Y C C K A+K ++ P V IL+LKRF ++ K++ V P +L+
Sbjct: 245 KLDGENAYHCNTCLGKVPASKMLTLHTPSKVLILVLKRFSDFTGNKMAKDVHYPEHLDMQ 304
Query: 148 KFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN 201
++ +R L + ++H G S SGHY C +G ++ D +V A + +
Sbjct: 305 PYLCEQRAGPLVYVLYAVLVHAGWSCHSGHYFCFVKAGNGQWYKMDDSKVTARDATCALS 364
Query: 202 --AYVVIY 207
AYV+ Y
Sbjct: 365 QHAYVLFY 372
>gi|187954679|gb|AAI40989.1| Deubiquitinating enzyme 1 [Mus musculus]
Length = 526
Score = 78.2 bits (191), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 102/240 (42%), Gaps = 50/240 (20%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV------------- 58
SG + P I+ F ++ ED+HEFL++ +E +H S L+V
Sbjct: 112 SGDVMKPSHILTSA------FHKHQQEDAHEFLMFTLETMHESCLQVHRQSKPTSEDSSP 165
Query: 59 -----------------ISGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLY 96
G+++ L++ LDI S+ +AL E L DN Y
Sbjct: 166 IHDIFGGWWRSQIKCLLCQGTSDTYDCFLDIPLDISSAQSVKQALWDTEKSEELCGDNAY 225
Query: 97 QCEKCGYKTEATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRRN 155
C KC K A+K + P V +++L RF+ + K+ V P +L+ ++
Sbjct: 226 YCGKCREKMPASKTLHVHIAPKVLMVVLNRFSAFTGNKLDRKVSYPEFLDLKPYLSEPTG 285
Query: 156 ------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G++S SGHY C G ++ D +V ++ V NAYV+ Y
Sbjct: 286 GPLPYALYAVLVHDGATSHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFY 345
>gi|348673035|gb|EGZ12854.1| hypothetical protein PHYSODRAFT_511733 [Phytophthora sojae]
Length = 742
Score = 78.2 bits (191), Expect = 3e-12, Method: Composition-based stats.
Identities = 69/265 (26%), Positives = 119/265 (44%), Gaps = 52/265 (19%)
Query: 1 MRKTLAACQAESGSAII-PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK-- 57
M + L + + + ++ P+ ++ ++ I+ F R EDSHEF L++ + RS L+
Sbjct: 182 MSRLLQSVHGNNAAKVLQPKELVMNVRHISKSFRIGRQEDSHEFFRLLLDSMQRSCLRKA 241
Query: 58 -----------------VISG------------------SNNLELSLDI-YQLSSLDEAL 81
+ G + L+LSL+I + ++++ AL
Sbjct: 242 NIKSETHSAASTTFVHRIFGGMLKNYLKCAKCGYVSERFDDFLDLSLEIAHGVNTVKGAL 301
Query: 82 GQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVP 141
F A E L N ++C CG + A K +I + P V ++ LKRF+ + KI ++ P
Sbjct: 302 NHFTAIETLDDRNAWKCTSCGKPSRAEKGLTIAECPNVLMIQLKRFDLMFGKIKRHIEFP 361
Query: 142 LYLEFGKFM--HC--RR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV 191
L+ M +C RR L + ++H G S+ GHY SSG ++ DD V
Sbjct: 362 RMLDIASGMSKNCEDRRRGRTKYELHAVLVHAGFSTDCGHYYAFVKGSSGQWYEMNDDTV 421
Query: 192 QASNLQQV--TNAYVVIY-ELLPSS 213
+ ++ V AY++ Y +LP S
Sbjct: 422 RWVSIDMVLQQKAYMLFYSRVLPLS 446
>gi|242081757|ref|XP_002445647.1| hypothetical protein SORBIDRAFT_07g023330 [Sorghum bicolor]
gi|241941997|gb|EES15142.1| hypothetical protein SORBIDRAFT_07g023330 [Sorghum bicolor]
Length = 998
Score = 77.8 bits (190), Expect = 3e-12, Method: Composition-based stats.
Identities = 68/244 (27%), Positives = 107/244 (43%), Gaps = 50/244 (20%)
Query: 14 SAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS------------- 60
+A+ P I++ L I + ED+HEFL Y I+ + +K S
Sbjct: 525 TALSPTGILSHLHDIGSSLGPGKQEDAHEFLRYAIDAMQSVCMKEASKGGVIQSMEETTL 584
Query: 61 --------------------GSNNLELSLDIY-----QLSSLDEALGQFFAKEYLVRDNL 95
S E LD+ +SSLDEAL +F + E L +N
Sbjct: 585 VQLIFGGYLRSKIKCSRCHVSSEQCEPMLDLTVEIDGDISSLDEALERFTSTEVLDGENK 644
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRR 154
Y C +C A K+ +IE+ P V + LKR+ KIS A++ P L G +M+
Sbjct: 645 YHCSRCKSYERAKKKLTIEEAPNVLTIALKRYQSGKFGKISKAIRFPDTLNMGHYMNPDT 704
Query: 155 N-------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AY 203
+ L + V+HH +++FSGHY C + G + D +V+ +L V + AY
Sbjct: 705 DDISPVYSLYAVVVHHDVMNAAFSGHYVCYVKDTQGKWFKADDSQVKPVSLDNVMSKCAY 764
Query: 204 VVIY 207
+++Y
Sbjct: 765 MLLY 768
>gi|388851883|emb|CCF54477.1| related to ubiquitin carboxyl-terminal hydrolase 36 [Ustilago
hordei]
Length = 749
Score = 77.8 bits (190), Expect = 4e-12, Method: Composition-based stats.
Identities = 67/237 (28%), Positives = 99/237 (41%), Gaps = 47/237 (19%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL--------------------K 57
P+ LK A R ED+HE+L +L+E + ++ L K
Sbjct: 273 PQEFNRNLKAFAKPLRQGRQEDAHEYLRFLLEALQQACLSRAPKSLKPDDPIRRTTFVQK 332
Query: 58 VISG-----------SNN-------LELSLDIYQ-LSSLDEALGQFFAKEYLVRDNLYQC 98
+ G S+N ++LSLD+ + ++SL +A F AK++L Y+C
Sbjct: 333 MFGGKLRSRVTCHNCSHNSDTFDPFMDLSLDVRKGINSLTDAFRAFVAKDHLTGSEKYKC 392
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMH-----CR 153
+KC K +ATKQF+IE P + LKRF KIS + L ++ R
Sbjct: 393 DKCKRKVDATKQFTIESCPPALTVHLKRFTAFGGKISRQISFDESLNIAPYLSENRGPVR 452
Query: 154 RNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN---AYVVIY 207
L +AV H+GS SGHY G + D V N AY++ Y
Sbjct: 453 YKLYAAVHHYGSGPNSGHYVASVKAPCGKWTRMDDSHVSEIGRGGPVNDQSAYILFY 509
>gi|50252264|dbj|BAD28270.1| putative ubiquitin-specific protease [Oryza sativa Japonica Group]
Length = 919
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 109/252 (43%), Gaps = 50/252 (19%)
Query: 6 AACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNL 65
A+ ESG + P I++ L+ I ED+HEFL +L+ + + L + G +
Sbjct: 437 ASTLRESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACLDGLGGEKQV 496
Query: 66 ELSL-------------------------------DIYQLS--------SLDEALGQFFA 86
E SL +I L+ SL +AL QF A
Sbjct: 497 EASLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTA 556
Query: 87 KEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLE 145
E L +N+Y+C +C +A KQ S+ + P + ++LKRF KI+ V P L+
Sbjct: 557 PEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQTGKYGKINKCVTFPDMLD 616
Query: 146 FGKFMHCRRN------LVSAVIHHGS--SSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQ 197
F+ + L + V+H + +SFSGHY G++ D VQA +L
Sbjct: 617 MVPFVTGAGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLN 676
Query: 198 QVTN--AYVVIY 207
QV + AY++ Y
Sbjct: 677 QVMSEGAYMLFY 688
>gi|218190388|gb|EEC72815.1| hypothetical protein OsI_06524 [Oryza sativa Indica Group]
Length = 808
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 109/252 (43%), Gaps = 50/252 (19%)
Query: 6 AACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNL 65
A+ ESG + P I++ L+ I ED+HEFL +L+ + + L + G +
Sbjct: 326 ASTLRESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACLDGLGGEKQV 385
Query: 66 ELSL-------------------------------DIYQLS--------SLDEALGQFFA 86
E SL +I L+ SL +AL QF A
Sbjct: 386 EASLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTA 445
Query: 87 KEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLE 145
E L +N+Y+C +C +A KQ S+ + P + ++LKRF KI+ V P L+
Sbjct: 446 PEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQTGKYGKINKCVTFPDMLD 505
Query: 146 FGKFMHCRRN------LVSAVIHHGS--SSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQ 197
F+ + L + V+H + +SFSGHY G++ D VQA +L
Sbjct: 506 MVPFVTGAGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLN 565
Query: 198 QVTN--AYVVIY 207
QV + AY++ Y
Sbjct: 566 QVMSEGAYMLFY 577
>gi|222622509|gb|EEE56641.1| hypothetical protein OsJ_06049 [Oryza sativa Japonica Group]
Length = 897
Score = 77.8 bits (190), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 70/252 (27%), Positives = 109/252 (43%), Gaps = 50/252 (19%)
Query: 6 AACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNL 65
A+ ESG + P I++ L+ I ED+HEFL +L+ + + L + G +
Sbjct: 401 ASTLRESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQGACLDGLGGEKQV 460
Query: 66 ELSL-------------------------------DIYQLS--------SLDEALGQFFA 86
E SL +I L+ SL +AL QF A
Sbjct: 461 EASLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTA 520
Query: 87 KEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLE 145
E L +N+Y+C +C +A KQ S+ + P + ++LKRF KI+ V P L+
Sbjct: 521 PEDLDGENMYKCGRCSAYVKARKQLSVHEVPNILTVVLKRFQTGKYGKINKCVTFPDMLD 580
Query: 146 FGKFMHCRRN------LVSAVIHHGS--SSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQ 197
F+ + L + V+H + +SFSGHY G++ D VQA +L
Sbjct: 581 MVPFVTGAGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQAVSLN 640
Query: 198 QVTN--AYVVIY 207
QV + AY++ Y
Sbjct: 641 QVMSEGAYMLFY 652
>gi|242064616|ref|XP_002453597.1| hypothetical protein SORBIDRAFT_04g008750 [Sorghum bicolor]
gi|241933428|gb|EES06573.1| hypothetical protein SORBIDRAFT_04g008750 [Sorghum bicolor]
Length = 966
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 108/247 (43%), Gaps = 50/247 (20%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS-------- 62
ESG + P I++ L+ I ED+HEFL +L+ + + L + G
Sbjct: 494 ESGGPLSPSRILSNLRNIGCRLGGGTQEDAHEFLRHLVMSMQAACLDGLGGEKHVEPSLQ 553
Query: 63 ------------------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLV 91
N ++L+L+I+ + SL +AL QF A E L
Sbjct: 554 ETTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDLD 613
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFM 150
DN+Y+C +C +A KQ S+ + P + L+LKRF KI+ V P L+ F+
Sbjct: 614 GDNMYKCGRCSAYVKARKQLSVHEVPNILTLVLKRFQSGKYGKINKCVTFPDMLDMVPFV 673
Query: 151 HCRRN------LVSAVIHHGS--SSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN- 201
+ L + V+H + +SFSGHY G++ D VQ ++ QV +
Sbjct: 674 TGSGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQVVSVNQVMSE 733
Query: 202 -AYVVIY 207
AY++ Y
Sbjct: 734 GAYMLFY 740
>gi|34324152|gb|AAN10252.1| deubiquitinating enzyme [Mus musculus]
Length = 526
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 102/240 (42%), Gaps = 50/240 (20%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV------------- 58
SG + P I+ F ++ ED+HEFL++ +E +H S L+V
Sbjct: 112 SGDVMKPSHILTSA------FHKHQQEDAHEFLMFTLETMHESCLQVHRQSKPTSEDSLP 165
Query: 59 -----------------ISGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLY 96
G+++ L++ LDI S+ +AL E L DN Y
Sbjct: 166 IHDIFGGWWRSQIKCLLCQGTSDTYDRFLDIPLDISSAQSVKQALWDTEKSEELCGDNAY 225
Query: 97 QCEKCGYKTEATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRR- 154
C KC K A+K + P V +++L RF+ + K+ V P +L+ ++
Sbjct: 226 YCGKCRQKMPASKTLHVHIAPKVLMVVLNRFSAFTGNKLDRKVSYPEFLDLKPYLSEPTG 285
Query: 155 -----NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G++S SGHY C G ++ D +V ++ V NAYV+ Y
Sbjct: 286 GPLPYTLYAVLVHDGATSHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLSY 345
>gi|326510035|dbj|BAJ87234.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 979
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 50/247 (20%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS-------- 62
ESG + P I++ L+ I ED+HEFL +L+ + + L + G
Sbjct: 500 ESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQAACLDGLGGEKQVEQSLQ 559
Query: 63 ------------------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLV 91
N ++L+L+I+ + SL +AL QF A E L
Sbjct: 560 ETTLIQQMFGGRLKSKVKCLRCHHESERYENIMDLTLEIHGWVESLQDALTQFTAPEDLD 619
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFM 150
DN+Y+C +C +A KQ S+ + P + ++LKRF KI+ V P L+ F+
Sbjct: 620 GDNMYKCGRCCAYVKARKQLSVHEVPNILTVVLKRFQTGKYGKINKCVTFPDMLDMVPFV 679
Query: 151 HCRRN------LVSAVIHHGS--SSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN- 201
+ L + V+H + +SFSGHY G++ D V+A +L QV +
Sbjct: 680 TGAGDHPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVKAVSLNQVMSE 739
Query: 202 -AYVVIY 207
AY++ Y
Sbjct: 740 GAYMLFY 746
>gi|339245907|ref|XP_003374587.1| ubiquitin carboxyl- hydrolase family protein [Trichinella spiralis]
gi|316972184|gb|EFV55872.1| ubiquitin carboxyl- hydrolase family protein [Trichinella spiralis]
Length = 918
Score = 77.4 bits (189), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 68/253 (26%), Positives = 106/253 (41%), Gaps = 49/253 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
+++ AA ++ SGS P I ++ + + R ED+HEFL Y ++
Sbjct: 221 VKRVFAAAKSNSGS-FSPTHIAQHIRCVMKSHSHGRQEDAHEFLRYFVDAMQNAALFPYR 279
Query: 50 -------------------GIHRS--------YLKVISGSNNLELSLDIYQLSSLDEALG 82
G HRS Y+ VI L+LSL+I Q ++++ A+
Sbjct: 280 GRNLDIFTQETSIISRIFGGFHRSQIVCNNCQYVSVIYDPF-LDLSLEIKQWNTVEHAMA 338
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
+ E L D+ Y C +C + A K +I P V + LKRF++ KI +
Sbjct: 339 HYTKMETLSNDDAYNCPRCKRRVSARKILTIHSAPNVLTIHLKRFDHFG-KIDRHIGYSD 397
Query: 143 YLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV--QAS 194
+ FM ++ L VIH+G S+ SGHY G +H D RV +S
Sbjct: 398 RMNLRPFMTEKQGPPVNYRLYGVVIHNGRSTNSGHYYAFVCNPLGQWHLMDDSRVCPVSS 457
Query: 195 NLQQVTNAYVVIY 207
+AYV+ Y
Sbjct: 458 ESALKASAYVLFY 470
>gi|297794145|ref|XP_002864957.1| hypothetical protein ARALYDRAFT_332761 [Arabidopsis lyrata subsp.
lyrata]
gi|297310792|gb|EFH41216.1| hypothetical protein ARALYDRAFT_332761 [Arabidopsis lyrata subsp.
lyrata]
Length = 731
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 70/242 (28%), Positives = 104/242 (42%), Gaps = 48/242 (19%)
Query: 14 SAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISG------------ 61
S + P I++KL+ I H + ED+HEFL +E + +LK S
Sbjct: 389 SPLSPIKILSKLQKIGKHLGPGKEEDAHEFLRCAVETMQSVFLKEASAAGPFAEETTLVG 448
Query: 62 -------------------SNNLELSLDIY-----QLSSLDEALGQFFAKEYLVRDNLYQ 97
S EL +D+ + SL+EAL QF A E L +N Y
Sbjct: 449 LTFGGYLHSKIKCMKCLHKSEQSELMMDLTVEIDGDIGSLEEALAQFTAYEVLDGENRYF 508
Query: 98 CEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFM------ 150
C +C +A K+ I + P + ++LKRF K+S + P L+ G +M
Sbjct: 509 CGRCKSYQKAKKKLMILEGPNILTVVLKRFQSDNFGKLSKPIHFPELLDIGPYMSDPNHG 568
Query: 151 -HCRRNLVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
H +L + V+H S+SFSGHY C T G + D V L+ V AY++
Sbjct: 569 DHPVYSLYAVVVHLDAMSTSFSGHYVCYIKTLHGDWFKIDDSNVFRVQLETVLLEGAYML 628
Query: 206 IY 207
+Y
Sbjct: 629 LY 630
>gi|219519282|gb|AAI45059.1| Dub1a protein [Mus musculus]
gi|223460645|gb|AAI37943.1| Dub1a protein [Mus musculus]
Length = 467
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 99/231 (42%), Gaps = 44/231 (19%)
Query: 21 IINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN---------------- 64
++ +++ F + ED+HEFL++ +E +H S L+V S
Sbjct: 114 VMKPSQILTSAFHKRKQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSPIHDIFGGWW 173
Query: 65 -------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKT 105
L++ LDI + S+ +AL E L +N Y C +C K
Sbjct: 174 RSQIKCHHCQGTSYSYDPFLDIPLDISSVQSVKQALQDTEKAEELCGENSYYCGRCRQKK 233
Query: 106 EATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRRN------LVS 158
A+K + P V +L+LKRF+ + K+ V P +L+ ++ L +
Sbjct: 234 PASKTLKLYSAPKVLMLVLKRFSGSMGKKLDRKVSYPEFLDLKPYLSQPTGGPLPYALYA 293
Query: 159 AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
++H G++ SGHY C G ++ D +V + ++ V NAYV+ Y
Sbjct: 294 VLVHEGATCHSGHYFCCVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFY 344
>gi|359321516|ref|XP_853986.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 573
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 45/221 (20%)
Query: 32 FEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN--------------------------- 64
F ++ ED+HE+L+++++ + ++ L S+
Sbjct: 153 FHRHKQEDAHEYLMFILDAMQQACLPEDKLSDPECPQDSTLIQQLFGGYWRSQIQCLHCQ 212
Query: 65 ---------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
L++SLDI S+ +AL Q E L +N Y C KC K A+K ++
Sbjct: 213 GISSTLEPYLDISLDIGDAHSVSQALEQLVKPELLEGENAYHCSKCLEKVPASKVLTLHT 272
Query: 116 PPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSF 168
P V IL+L+RF+ L K++ VQ P L+ ++ +R L + ++H G S
Sbjct: 273 SPKVLILVLRRFSDLTGNKMTKEVQYPERLDMQHYLSEQRAGPLVYVLYAVLVHAGRSCH 332
Query: 169 SGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
SGHY C +G ++ D +V A ++ AYV+ Y
Sbjct: 333 SGHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYVLFY 373
>gi|2739431|gb|AAB95194.1| hematopoietic-specific IL-2 deubiquitinating enzyme [Mus musculus]
Length = 545
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 44/231 (19%)
Query: 21 IINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV---------------------- 58
++ +++ F ++ ED+HEFL++ +E +H S L+V
Sbjct: 115 VMKPSQILTSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSPIHDIFGGLW 174
Query: 59 --------ISGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKT 105
G+++ L++ LDI S+++AL E L +N Y C +C K
Sbjct: 175 RSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKSEELRGENAYYCGRCRQKM 234
Query: 106 EATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRRN------LVS 158
A+K I P V +L+LKRF+ ++ K+ V P +L+ ++ L +
Sbjct: 235 PASKTLHIHSAPKVLLLVLKRFSAFMGNKLDRKVSYPEFLDLKPYLSQPTGGPLPYALYA 294
Query: 159 AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
++H G++ SGHY G+++ D +V + ++ V NAYV+ Y
Sbjct: 295 VLVHEGATCHSGHYFSYVKARHGAWYKMDDTKVTSCDVTSVLNENAYVLFY 345
>gi|2739433|gb|AAB94636.1| hematopoietic-specific IL-2 deubiquitinating enzyme [Mus musculus]
Length = 545
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 44/231 (19%)
Query: 21 IINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV---------------------- 58
++ +++ F ++ ED+HEFL++ +E +H S L+V
Sbjct: 115 VMKPSQILTSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSPIHDIFGGLW 174
Query: 59 --------ISGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKT 105
G+++ L++ LDI S+++AL E L +N Y C +C K
Sbjct: 175 RSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKSEELRGENAYYCGRCRQKM 234
Query: 106 EATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRRN------LVS 158
A+K I P V +L+LKRF+ ++ K+ V P +L+ ++ L +
Sbjct: 235 PASKTLHIHSAPKVLLLVLKRFSAFMGNKLDRKVSYPEFLDLKPYLSQPTGGPLPYALYA 294
Query: 159 AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
++H G++ SGHY G+++ D +V + ++ V NAYV+ Y
Sbjct: 295 VLVHEGATCHSGHYFSYVKARHGAWYKMDDTKVTSCDVTSVLNENAYVLFY 345
>gi|119964688|ref|NP_034219.3| deubiquitinating enzyme 2 [Mus musculus]
gi|148684713|gb|EDL16660.1| mCG122921 [Mus musculus]
gi|157169780|gb|AAI52900.1| Deubiquitinating enzyme 2 [synthetic construct]
Length = 545
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 104/231 (45%), Gaps = 44/231 (19%)
Query: 21 IINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV---------------------- 58
++ +++ F ++ ED+HEFL++ +E +H S L+V
Sbjct: 115 VMKPSQILTSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSPIHDIFGGLW 174
Query: 59 --------ISGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKT 105
G+++ L++ LDI S+++AL E L +N Y C +C K
Sbjct: 175 RSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKSEELRGENAYYCGRCRQKM 234
Query: 106 EATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRRN------LVS 158
A+K I P V +L+LKRF+ ++ K+ V P +L+ ++ L +
Sbjct: 235 PASKTLHIHSAPKVLLLVLKRFSAFMGNKLDRKVSYPEFLDLKPYLSQPTGGPLPYALYA 294
Query: 159 AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
++H G++ SGHY G+++ D +V + ++ V NAYV+ Y
Sbjct: 295 VLVHEGATCHSGHYFSYVKARHGAWYKMDDTKVTSCDVTSVLNENAYVLFY 345
>gi|354501314|ref|XP_003512737.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Cricetulus griseus]
gi|344238609|gb|EGV94712.1| Ubiquitin carboxyl-terminal hydrolase DUB-1 [Cricetulus griseus]
Length = 482
Score = 77.4 bits (189), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 68/279 (24%), Positives = 117/279 (41%), Gaps = 59/279 (21%)
Query: 21 IINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL-----------------KVISGSN 63
+I + + F +R ED+HEFLL+ + +H S L ++ GS
Sbjct: 173 VIQPSEKLTAAFHKHRQEDAHEFLLFTLNAMHTSCLPGSKLLGCTSEQSSLIHEIFGGSW 232
Query: 64 N------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKT 105
L+++LDI S+++AL +E L +N Y C+ C KT
Sbjct: 233 KSQIKCLHCNETTDLLEPFLDITLDIQTAQSVNQALENLVMEEQLCGENAYHCDNCRQKT 292
Query: 106 EATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRR------NLVS 158
A+K +++ P V +L+L RF+ + K V P +F ++ +L +
Sbjct: 293 MASKTLTVKDAPKVLLLVLNRFSEFTGDKKDRKVSYPESFDFQPYISQSHRQPLFYSLYA 352
Query: 159 AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY--------- 207
++H G + SGHY C +G ++ D V ++ V + AYV+ Y
Sbjct: 353 VLVHDGVTCHSGHYFCYVKAGNGHWYKMDDSSVTRCDVNSVLSEPAYVLFYVQQTDLRTN 412
Query: 208 -ELLPSSLHHLNSSLHSS----SPG-SVEPRTHHRNYMA 240
+L + H + S +++ SP + EP H N A
Sbjct: 413 LWVLSQAEHQVGESWYTTINRGSPTEAAEPPDHTENTAA 451
>gi|345781818|ref|XP_851591.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 45/221 (20%)
Query: 32 FEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN--------------------------- 64
F ++ ED+HE+L+++++ + ++ L S+
Sbjct: 153 FHRHKQEDAHEYLMFILDAMQQACLPEDKLSDPECPQDSTLIQQLFGGYWRSQIQCLHCQ 212
Query: 65 ---------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
L++SLDI S+ +AL Q E L +N Y C KC K A+K ++
Sbjct: 213 GISSTLEPYLDISLDIGAAHSISQALEQLMKPELLEGENAYHCSKCLEKVPASKVLTLHT 272
Query: 116 PPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSF 168
P V IL+L+RF+ L K++ VQ P L+ ++ +R L + ++H G S
Sbjct: 273 SPKVLILVLRRFSDLTGNKMTKEVQYPERLDMQHYLSEQRAGPLVYVLYAVLVHAGRSCH 332
Query: 169 SGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
SGHY C +G ++ D +V A ++ AYV+ Y
Sbjct: 333 SGHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYVLFY 373
>gi|302854895|ref|XP_002958951.1| hypothetical protein VOLCADRAFT_70119 [Volvox carteri f.
nagariensis]
gi|300255697|gb|EFJ39986.1| hypothetical protein VOLCADRAFT_70119 [Volvox carteri f.
nagariensis]
Length = 252
Score = 77.0 bits (188), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 69/234 (29%), Positives = 98/234 (41%), Gaps = 51/234 (21%)
Query: 25 LKLIAH-----HFEYYRPEDSHEFLLYLIEGIHRSYLK------------------VISG 61
L+ +AH F R EDSHEFL L++ +H + LK + G
Sbjct: 17 LQALAHTPPLAEFRLGRQEDSHEFLRCLLDAMHEACLKRFKPKPPPELAATTFVYRIFGG 76
Query: 62 SNN------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGY 103
L+LSL+I + SL+ AL F A E L N Y+C K
Sbjct: 77 RLRSQIECEGVDYVSRTYDPFLDLSLEINRAQSLERALSAFTAPEVLDGPNKYRCPKNNK 136
Query: 104 KTEATKQFSIEKPPIVFILLLKRFNY--LCLKISCAVQVPLYLEFGKFMHCRRN------ 155
A K+ S+E+ P V + KRF Y KI+ V L+ +M +
Sbjct: 137 LVRAVKRISVEEAPNVLTVHFKRFEYGGFGAKINKKVDFGTQLDLRPYMSNVKGPQQLYE 196
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
L ++HHG S SGHY C ++G +H D RV A + V + AY++ Y
Sbjct: 197 LYGVLVHHGYSVNSGHYICYVKAANGLWHVCDDHRVTAVGERTVLDQRAYILFY 250
>gi|359324293|ref|XP_003640328.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 45/221 (20%)
Query: 32 FEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN--------------------------- 64
F ++ ED+HE+L+++++ + ++ L S+
Sbjct: 153 FHRHKQEDAHEYLMFILDAMQQACLPEDKLSDPECPQDSTLIQQLFGGYWRSQIQCLHCQ 212
Query: 65 ---------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
L++SLDI S+ +AL Q E L +N Y C KC K A+K ++
Sbjct: 213 GISSTLEPYLDISLDIGDAHSVSQALEQLVKPELLEGENAYHCSKCLEKVPASKVLTLHT 272
Query: 116 PPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSF 168
P V IL+L+RF+ L K++ VQ P L+ ++ +R L + ++H G S
Sbjct: 273 SPKVLILVLRRFSDLTGNKMTKEVQYPERLDMQHYLSEQRAGPLVYVLYAVLVHAGRSCH 332
Query: 169 SGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
SGHY C +G ++ D +V A ++ AYV+ Y
Sbjct: 333 SGHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYVLFY 373
>gi|14994718|gb|AAK77003.1| deubiquitinating enzyme 2A [Mus musculus]
Length = 545
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 44/231 (19%)
Query: 21 IINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV---------------------- 58
++ +++ F ++ ED+HEFL++ +E +H S L+V
Sbjct: 115 VMKPSQILTSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSPIHDIFGGLW 174
Query: 59 --------ISGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKT 105
G+++ L++ LDI S+++AL E L +N Y C +C K
Sbjct: 175 RSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKSEELRGENAYYCGRCRQKM 234
Query: 106 EATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRRN------LVS 158
A+K I P V +L+LKRF+ ++ K+ V P +L+ ++ L +
Sbjct: 235 PASKTLHIHSAPKVLLLVLKRFSAFMGNKLDRKVSYPEFLDLKPYLSQPTGGPLPYALYA 294
Query: 159 AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
++H G++ SGHY G ++ D +V + ++ V NAYV+ Y
Sbjct: 295 VLVHEGATCHSGHYFSYVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFY 345
>gi|449273422|gb|EMC82916.1| Ubiquitin carboxyl-terminal hydrolase 46, partial [Columba livia]
Length = 347
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 72/261 (27%), Positives = 111/261 (42%), Gaps = 55/261 (21%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI---HRSYLKVISGSN 63
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I + K+ +G+
Sbjct: 76 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADMEKQNGKLKNGNM 135
Query: 64 N----------------------------------------LELSLDIYQLSSLDEALGQ 83
N L+LS+D+ Q +S+ L
Sbjct: 136 NEAEENNKQELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTSITHCLRD 195
Query: 84 FFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAV 138
F E L + Y CE C K EA K+ ++K P++ L LKRF Y+ K+S V
Sbjct: 196 FSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRV 255
Query: 139 QVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQ 192
PL L G ++ R +LV+ V+H GS GHY I S G + F DD V+
Sbjct: 256 VFPLELRLFNTSGDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLLFDDDIVE 314
Query: 193 ASNLQQVTNAYVVIYELLPSS 213
+ Q + Y + ++ +S
Sbjct: 315 KIDAQAIEEFYGLTSDISKNS 335
>gi|330840214|ref|XP_003292114.1| hypothetical protein DICPUDRAFT_156792 [Dictyostelium purpureum]
gi|325077668|gb|EGC31366.1| hypothetical protein DICPUDRAFT_156792 [Dictyostelium purpureum]
Length = 413
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/238 (26%), Positives = 102/238 (42%), Gaps = 46/238 (19%)
Query: 5 LAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH------------ 52
+ A +G A P +I ++ +A F R EDSHEF ++I+ +
Sbjct: 63 IIASHKATGKATTPLVIAKNIEKVAPTFRIGRQEDSHEFFCFVIDSLQKVCLSKFPKGSI 122
Query: 53 --RSYLKVISGS-----------------------NNLELSLDIYQLSSLDEALGQFFAK 87
R + + GS ++L ++I Q +SL + L F
Sbjct: 123 SPRDSMTTVIGSIFGGYLRSQVKCTVCQYESNTFDEFMDLCVEINQANSLTKGLQNFVKP 182
Query: 88 EYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL---KISCAVQVPLYL 144
E L +N Y+C+KC +A K IE P V + +KRF++L K + +Q L
Sbjct: 183 EILDGENGYKCKKCNKLVKAEKSLQIEISPPVLTVQIKRFSFLNSYGGKDNKHIQFGQTL 242
Query: 145 EFGKFMHCRRN-----LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV-QASNL 196
+ +M + + L S ++H G S+ SGHY C S+G ++ D V QA N+
Sbjct: 243 DLSPYMTQKNDYSIYDLNSVLVHLGDSANSGHYYCYVKGSNGVWYKMDDSMVSQAYNV 300
>gi|112983634|ref|NP_001001559.2| deubiquitinating enzyme 2a [Mus musculus]
gi|148684706|gb|EDL16653.1| mCG124600 [Mus musculus]
gi|148922521|gb|AAI46299.1| Deubiquitinating enzyme 2a [synthetic construct]
gi|151555365|gb|AAI48744.1| Deubiquitinating enzyme 2a [synthetic construct]
Length = 545
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 103/231 (44%), Gaps = 44/231 (19%)
Query: 21 IINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV---------------------- 58
++ +++ F ++ ED+HEFL++ +E +H S L+V
Sbjct: 115 VMKPSQILTSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSPIHDIFGGLW 174
Query: 59 --------ISGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKT 105
G+++ L++ LDI S+++AL E L +N Y C +C K
Sbjct: 175 RSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKSEELRGENAYYCGRCRQKM 234
Query: 106 EATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRRN------LVS 158
A+K I P V +L+LKRF+ ++ K+ V P +L+ ++ L +
Sbjct: 235 PASKTLHIHSAPKVLLLVLKRFSAFMGNKLDRKVSYPEFLDLKPYLSQPTGGPLPYALYA 294
Query: 159 AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
++H G++ SGHY G ++ D +V + ++ V NAYV+ Y
Sbjct: 295 VLVHEGATCHSGHYFSYVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFY 345
>gi|18400597|ref|NP_565576.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
gi|75265927|sp|Q9SJA1.2|UBP19_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 19; AltName:
Full=Deubiquitinating enzyme 19; Short=AtUBP19; AltName:
Full=Ubiquitin thioesterase 19; AltName:
Full=Ubiquitin-specific-processing protease 19
gi|13430806|gb|AAK26025.1|AF360315_1 putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|15810655|gb|AAL07252.1| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|20197976|gb|AAD23896.2| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|330252513|gb|AEC07607.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
Length = 672
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 62/275 (22%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--------------- 62
P II++L I + Y R ED+HE + + I+ + L G
Sbjct: 238 PMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLDEFGGEKVVPPRAQETTLIQY 297
Query: 63 -----------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQC 98
N ++L+++I+ SL+E L QF AKE+L DNLY+C
Sbjct: 298 IFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNLYKC 357
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRR--- 154
++C +A K+ SI P + + LKRF K++ + P + G +M
Sbjct: 358 DRCDDYVKACKRLSIRCAPNILTIALKRFQGGRFGKLNKRISFPETFDLGPYMSGGGEGS 417
Query: 155 ---NLVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H ++SF GHY C G+++ D V+ L+ V AY+++Y
Sbjct: 418 DVYKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRAYMLLY 477
Query: 208 ELL---PSSLHHLNS---------SLHSSSPGSVE 230
+ PS+L S + S+ GSVE
Sbjct: 478 SRVQPRPSNLRSEESQDEKKTDTLNTESNQDGSVE 512
>gi|242011010|ref|XP_002426250.1| Ubl carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
gi|212510313|gb|EEB13512.1| Ubl carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
Length = 511
Score = 77.0 bits (188), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 64/241 (26%), Positives = 102/241 (42%), Gaps = 35/241 (14%)
Query: 1 MRKTLAAC-QAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVI 59
+RK L + Q + AI P + + + + F Y+ +D+HEFL Y+++ +H L ++
Sbjct: 259 LRKVLISLNQGDGKEAISPNELFSAIWKVVPRFRGYQQQDAHEFLRYMLDRLHTELLSLL 318
Query: 60 SGSNNLELSLDIY-----QLSSLDEAL---------GQFFAKEYLVRDNLYQCEKCGYKT 105
+ D Y + LDE L F E L LY C C K
Sbjct: 319 PDETLRDNIPDKYLYSQKKTKDLDETLPPCTIADCLTSFIEVEELAETELYYCNNCKSKQ 378
Query: 106 EATKQFSIEKPPIVFILLLKRFNY---LCLKISCAVQVPLY-LEFGKF----MHCRR--- 154
+TK+F I + P V L LKRF + KI + P L+ +F +H R
Sbjct: 379 RSTKRFWIRRLPNVLCLHLKRFRWNSHFRTKIDTEIVFPTTALDMSQFVLSNIHETRQSG 438
Query: 155 ------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTNA--YVVI 206
+L + ++HHGS GHY + + G + +F D V+ + V Y++
Sbjct: 439 AGTNLYDLAAVIVHHGSGVGCGHYTAF-AINDGEWFHFNDSTVRPTGQATVAKCKPYILF 497
Query: 207 Y 207
Y
Sbjct: 498 Y 498
>gi|224089481|ref|XP_002308728.1| predicted protein [Populus trichocarpa]
gi|222854704|gb|EEE92251.1| predicted protein [Populus trichocarpa]
Length = 489
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 107/240 (44%), Gaps = 50/240 (20%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--------------- 62
P II++L I + Y R ED+HEF+ I+ + L G
Sbjct: 245 PINIISRLPNIGGNLGYGRQEDAHEFMRLAIDTMQSVCLDEFGGEKAVEPASQETTIIQH 304
Query: 63 -----------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQC 98
N ++L+++I+ +SL+E L QF KE+L +N+Y+C
Sbjct: 305 IFGGRLQSQVICTKCNKISNQFENMMDLTVEIHGDAASLEECLDQFTDKEWLHGENMYKC 364
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN-- 155
++C +A K+ +I++ P V + LKRF K++ V P L+ +M +
Sbjct: 365 DRCNDYVKAWKRLTIQRAPNVLTIALKRFQSGRFGKLNKRVTFPEMLDLSPYMSEGGDGT 424
Query: 156 ----LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + V+H ++SF GHY C G++H D +V + L +V AY+++Y
Sbjct: 425 DVYKLYAVVVHVDMLNASFFGHYICYTKDFHGNWHRIDDCKVSSVELDEVLSQGAYMLVY 484
>gi|359321530|ref|XP_851647.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 76.6 bits (187), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 60/190 (31%), Positives = 95/190 (50%), Gaps = 21/190 (11%)
Query: 36 RPEDSHEFLLYLIEGIHRSYLKVI--SGSNN-----LELSLDIYQLSSLDEALGQFFAKE 88
RP+DS + L G RS ++ + G ++ L++SLDI S+ +AL Q E
Sbjct: 187 RPQDS-TLIQQLFGGYWRSQIQCLHCQGISSTLEPYLDISLDIGDAHSVSQALEQLVKPE 245
Query: 89 YLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFG 147
L +N Y C KC K A+K ++ P V IL+L+RF+ L K++ VQ P L+
Sbjct: 246 LLEGENAYHCSKCLEKVPASKVLTLHTSPKVLILVLRRFSNLTGNKMTKEVQYPERLDLQ 305
Query: 148 KFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN----LQ 197
++ +R L + ++H G S SGHY C +G ++ D +V + + L+
Sbjct: 306 HYLSEQRAGPLVYVLYAVLVHAGRSCHSGHYFCFIKAGNGQWYKMDDAKVSSCDVICALR 365
Query: 198 QVTNAYVVIY 207
Q AYV+ Y
Sbjct: 366 Q--PAYVLFY 373
>gi|334184421|ref|NP_001189593.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
gi|227206324|dbj|BAH57217.1| AT2G24640 [Arabidopsis thaliana]
gi|330252514|gb|AEC07608.1| ubiquitin carboxyl-terminal hydrolase 19 [Arabidopsis thaliana]
Length = 502
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 62/275 (22%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--------------- 62
P II++L I + Y R ED+HE + + I+ + L G
Sbjct: 68 PMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLDEFGGEKVVPPRAQETTLIQY 127
Query: 63 -----------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQC 98
N ++L+++I+ SL+E L QF AKE+L DNLY+C
Sbjct: 128 IFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNLYKC 187
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRR--- 154
++C +A K+ SI P + + LKRF K++ + P + G +M
Sbjct: 188 DRCDDYVKACKRLSIRCAPNILTIALKRFQGGRFGKLNKRISFPETFDLGPYMSGGGEGS 247
Query: 155 ---NLVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H ++SF GHY C G+++ D V+ L+ V AY+++Y
Sbjct: 248 DVYKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRAYMLLY 307
Query: 208 ELL---PSSLHHLNS---------SLHSSSPGSVE 230
+ PS+L S + S+ GSVE
Sbjct: 308 SRVQPRPSNLRSEESQDEKKTDTLNTESNQDGSVE 342
>gi|359324297|ref|XP_003640330.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 645
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 98/221 (44%), Gaps = 45/221 (20%)
Query: 32 FEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN--------------------------- 64
F ++ ED+HE+L+++++ + ++ L S+
Sbjct: 263 FHRHKQEDAHEYLMFILDAMQQACLPEDKLSDPECPQDSTLIQQLFGGYWRSQIQCLHCQ 322
Query: 65 ---------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
L++SLDI S+ +AL Q E L +N Y C KC K A+K ++
Sbjct: 323 GISSTLEPYLDISLDIGDAHSVSQALEQLVKPELLEGENAYHCSKCLEKVPASKVLTLHT 382
Query: 116 PPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSF 168
P V IL+L+RF+ L K++ VQ P L+ ++ +R L + ++H G S
Sbjct: 383 SPKVLILVLRRFSDLTGNKMTKEVQYPERLDMQHYLSEQRAGPLVYVLYAVLVHAGRSCH 442
Query: 169 SGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
SGHY C +G ++ D +V A ++ AYV+ Y
Sbjct: 443 SGHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYVLFY 483
>gi|32402146|gb|AAP81046.1| deubiquitinating enzyme 1A [Mus musculus]
Length = 465
Score = 76.6 bits (187), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 57/218 (26%), Positives = 94/218 (43%), Gaps = 44/218 (20%)
Query: 34 YYRPEDSHEFLLYLIEGIHRSYLKVISGSNN----------------------------- 64
+ R ED+HEFL++ +E +H S L+V S
Sbjct: 127 HKRKEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSPIHDIFGGWWRSQIKCHHCQGTS 186
Query: 65 ------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPI 118
L++ LDI + S+ +AL E L +N Y C +C K A+K + P
Sbjct: 187 YSYDPFLDIPLDISSVQSVKQALQDTEKAEELCGENSYYCGRCRQKKPASKTLKLYSAPK 246
Query: 119 VFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGH 171
V +L+LKRF+ + K+ V P +L+ ++ L + ++H G++ SGH
Sbjct: 247 VLMLVLKRFSGSMGKKLDRKVSYPEFLDLKPYLSQPTGGPLPYALYAVLVHEGATCHSGH 306
Query: 172 YNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
Y C G ++ D +V + ++ V NAYV+ Y
Sbjct: 307 YFCCVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFY 344
>gi|328868712|gb|EGG17090.1| peptidase C19 family protein [Dictyostelium fasciculatum]
Length = 857
Score = 76.6 bits (187), Expect = 9e-12, Method: Composition-based stats.
Identities = 68/239 (28%), Positives = 104/239 (43%), Gaps = 44/239 (18%)
Query: 13 GSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH--------------RSYLKV 58
G AI P+ I LK A F R EDSHEF+ +++EG R +
Sbjct: 348 GRAITPKEIAINLKKFAPGFRLGRQEDSHEFIRFILEGCQKVCLSKYAKGSVTPRDSMTT 407
Query: 59 ISGS------------------NN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNL 95
+ GS +N ++LS+DI+ S+ +A+ QF EYL N
Sbjct: 408 VIGSIFGGYLQSQVKCTQCSYESNTFDPFMDLSVDIHTSDSITKAMQQFVKAEYLDGANK 467
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMHCRR- 154
Y+C KC A+K+ ++ P + + LKRFNY K + +Q L+ +M
Sbjct: 468 YKCCKCKKLVRASKRMTVHVAPSILTIQLKRFNYNGSKSNRQIQYESTLDLSPYMSNSTK 527
Query: 155 ----NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+L ++H G S+ SGHY C S+ +H D+ V + N AY++ Y
Sbjct: 528 DAVYDLYGVLVHSGGSTNSGHYYCYVKGSTNLWHNMNDNFVSSVNQPTALGQRAYILFY 586
>gi|215736860|dbj|BAG95789.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 750
Score = 76.6 bits (187), Expect = 9e-12, Method: Composition-based stats.
Identities = 56/156 (35%), Positives = 83/156 (53%), Gaps = 15/156 (9%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYL-VRDNLYQCEKCGYKTEATKQFSIEKPPIVFILL 123
L+LSLDI + +SL AL F A+E L + YQC++C K A K+F+I+K P V +
Sbjct: 58 LDLSLDIGKATSLVRALQNFTAEELLDGGEKQYQCQRCRKKVVAKKKFTIDKAPYVLTIH 117
Query: 124 LKRFNYLC--LKISCAVQVPLYLEFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCI 175
LKRF+ KI V L+ F+ + +L ++H G ++ SGHY C
Sbjct: 118 LKRFSPFNPREKIDKKVDFQPMLDLKPFISDSKGADFKYSLYGVLVHAGWNTQSGHYYCF 177
Query: 176 GSTSSGSYHYFGDDRV----QASNLQQVTNAYVVIY 207
TSSG +H D++V +A L+Q AY++ Y
Sbjct: 178 VRTSSGMWHNLDDNQVRQVREADVLRQ--KAYMLFY 211
>gi|307103899|gb|EFN52156.1| hypothetical protein CHLNCDRAFT_139325 [Chlorella variabilis]
Length = 799
Score = 76.3 bits (186), Expect = 9e-12, Method: Composition-based stats.
Identities = 66/240 (27%), Positives = 102/240 (42%), Gaps = 46/240 (19%)
Query: 14 SAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHR-----------------SYL 56
S + P L+ I+ F R ED+HEFL+ L++ +H S++
Sbjct: 102 SPLAPMKFAKSLRRISRSFRLGRQEDAHEFLIALLDAMHEASIAGITPKPSPELAQTSFI 161
Query: 57 KVISG---------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQ 97
I G SN ++LSL+I + SS+ AL F E L N Y+
Sbjct: 162 YRIFGGRMRSQVKCSECGYESNTYDPCIDLSLEITRASSVKRALEHFTKGEVLDGGNKYK 221
Query: 98 CEKCGYKTEATKQFSIEKPPIVFILLLKR--FNYLCLKISCAVQVPLYLEFGKFMH---- 151
C + A K+ +++ P V ++ LKR F++ KIS + L L+ G FM
Sbjct: 222 CPRQQKAVRAVKRMTVDSAPNVLMIQLKRFEFSFSGHKISKKIDFDLELDLGPFMSEAPL 281
Query: 152 --CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+L + ++H G S SGHY +G +H D V +QV AY++ Y
Sbjct: 282 VPALYDLYAVLVHSGHSVHSGHYYAYVRAPNGIWHICDDTHVAQVAERQVMAQKAYILFY 341
>gi|291411125|ref|XP_002721843.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 500
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL-----------------KVIS 60
P +I +++A F R ED+HEFL++ ++ + + L +++
Sbjct: 111 PGDVIQPCQVLAAGFHTNRQEDAHEFLMFALDVLKAAGLPGLTDGVGPQEDQSPSQQIVG 170
Query: 61 G------------------SNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G LE++LDI S+++AL E L +N Y C C
Sbjct: 171 GHWRSQIQCLQCQGISETLDPYLEIALDIKTADSVEQALQHLVQPEELAGENAYHCATCR 230
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRRN------ 155
KT A+K +++ V + +LKRF+ + K+ V P L+ +M +
Sbjct: 231 QKTAASKTLTLQSAGKVLLFVLKRFSEFTGEKLGGQVHYPECLDMRPYMSQQNGRPLDYV 290
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
L + ++H G SGHY C SG ++ D +V A + V N AYV+ Y
Sbjct: 291 LYAVLVHVGLRCQSGHYFCYVKAGSGHWYKMDDAKVTACDTTCVLNQSAYVLFY 344
>gi|291411123|ref|XP_002721842.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 530
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL-----------------KVIS 60
P +I +++A F R ED+HEFL++ ++ + + L +++
Sbjct: 141 PGDVIQPCQVLAAGFHTNRQEDAHEFLMFALDVLKAAGLPGLTDGVGPQEDQSPSQQIVG 200
Query: 61 G------------------SNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G LE++LDI S+++AL E L +N Y C C
Sbjct: 201 GHWRSQIQCLQCQGISETLDPYLEIALDIKTADSVEQALQHLVQPEELAGENAYHCATCR 260
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRRN------ 155
KT A+K +++ V + +LKRF+ + K+ V P L+ +M +
Sbjct: 261 QKTAASKTLTLQSAGKVLLFVLKRFSEFTGEKLGGQVHYPECLDMRPYMSQQNGRPLDYV 320
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
L + ++H G SGHY C SG ++ D +V A + V N AYV+ Y
Sbjct: 321 LYAVLVHVGLRCQSGHYFCYVKAGSGHWYKMDDAKVTACDTTCVLNQSAYVLFY 374
>gi|355728036|gb|AES09395.1| ubiquitin specific peptidase 36 [Mustela putorius furo]
Length = 270
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 54/177 (30%), Positives = 83/177 (46%), Gaps = 36/177 (20%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------- 56
A SG+AI P I LK IA HF + ED+HEFL Y+++ + ++ L
Sbjct: 69 ANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYIVDAMQKACLNGCAKLDRQTQAT 128
Query: 57 --------------------KVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDN 94
K +S + + L+++L+I Q +++ AL F + L +N
Sbjct: 129 TLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFVKPDVLSGEN 188
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFM 150
Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L +M
Sbjct: 189 AYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYM 245
>gi|145504743|ref|XP_001438338.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124405510|emb|CAK70941.1| unnamed protein product [Paramecium tetraurelia]
Length = 538
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 69/237 (29%), Positives = 111/237 (46%), Gaps = 42/237 (17%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------------- 49
A ++G+ I +L+ +LI F+ + DS EFL Y IE
Sbjct: 299 AVNKKAGAFIKIQLL---KQLIKSKFDPRQQHDSQEFLRYFIEQLTVEIQGQFKYDQPIT 355
Query: 50 -----GIHRSYLKVISGSNN-------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQ 97
G S +K + L+LSL + +L +L++ L FFA+E L + YQ
Sbjct: 356 EIVFQGQMMSLIKCDQCNQQSTKFESFLDLSLPMNKLQTLEKCLKLFFAQEIL--SDHYQ 413
Query: 98 CEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC--LKISCAVQVPLYLEFGKF--MHCR 153
CE C +T A K++ I PP+ ++ LKRF +K++ V+ P+ L+ +F + +
Sbjct: 414 CENCYNETRAVKKYVIGTPPLYLMIHLKRFQVYPNRIKLNGHVRFPISLDVQEFCSIKAK 473
Query: 154 RNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIYE 208
L S ++H G+ GHY S+ ++YF D ++ Q V AYV+IYE
Sbjct: 474 YKLRSIIVHQGTPE-RGHY-VTFSSRQDQWYYFDDHKIYLVTEQDVLQQQAYVLIYE 528
>gi|345806604|ref|XP_003435458.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Canis lupus familiaris]
Length = 408
Score = 76.3 bits (186), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 97/221 (43%), Gaps = 45/221 (20%)
Query: 32 FEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN--------------------------- 64
F ++ ED+HE+L+++++ + ++ L S+
Sbjct: 26 FHRHKQEDAHEYLMFILDAMQQACLPQDKLSDPECPQDSTLIQQLFGGYWRSQIQCLHCQ 85
Query: 65 ---------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
L++SLDI S+ +AL Q E L +N Y C KC K A+K ++
Sbjct: 86 GISSTLEPYLDISLDIGDAHSVSQALEQLVKPELLEGENAYHCSKCLEKVPASKVLTLHT 145
Query: 116 PPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSF 168
P V IL+L+RF+ L K++ VQ P L+ ++ +R L + ++H G S
Sbjct: 146 SPKVLILVLRRFSDLTGNKMTKEVQYPERLDLQHYLSEQRTGPLVYVLYAVLVHAGRSCH 205
Query: 169 SGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
SGHY C +G ++ D +V ++ AYV+ Y
Sbjct: 206 SGHYFCFVKAGNGQWYKMDDAKVSTCDVTCALRQPAYVLFY 246
>gi|115299771|ref|NP_958811.2| deubiquitinating enzyme 1a [Mus musculus]
Length = 468
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 57/220 (25%), Positives = 94/220 (42%), Gaps = 44/220 (20%)
Query: 32 FEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN--------------------------- 64
F + ED+HEFL++ +E +H S L+V S
Sbjct: 126 FHKRKQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSPIHDIFGGWWRSQIKCHHCQG 185
Query: 65 --------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKP 116
L++ LDI + S+ +AL E L +N Y C +C K A+K +
Sbjct: 186 TSYSYDPFLDIPLDISSVQSVKQALQDTEKAEELCGENSYYCGRCRQKKPASKTLKLYSA 245
Query: 117 PIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFS 169
P V +L+LKRF+ + K+ V P +L+ ++ L + ++H G++ S
Sbjct: 246 PKVLMLVLKRFSGSMGKKLDRKVSYPEFLDLKPYLSQPTGGPLPYALYAVLVHEGATCHS 305
Query: 170 GHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
GHY C G ++ D +V + ++ V NAYV+ Y
Sbjct: 306 GHYFCCVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFY 345
>gi|339255776|ref|XP_003370631.1| ubiquitin carboxyl- hydrolase superfamily [Trichinella spiralis]
gi|316965826|gb|EFV50494.1| ubiquitin carboxyl- hydrolase superfamily [Trichinella spiralis]
Length = 330
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 71/240 (29%), Positives = 101/240 (42%), Gaps = 58/240 (24%)
Query: 9 QAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYL-----------------IEGI 51
Q I P+ I +LK F+ Y +D+HEFL YL I G
Sbjct: 55 QKRRVGTIAPKKFIGRLKKENDLFDNYMQQDAHEFLNYLLNTVADILLEEKRHEKRISGG 114
Query: 52 HRSYLK-----------VISGS------------------NNLELSLDIYQLSSLDEALG 82
H++ +K V G+ + L+LS+D+ Q +S+ L
Sbjct: 115 HKTQVKDKLAEHTWVHDVFQGTLTNETRCLNCETVSSKDEDFLDLSVDVQQNTSITHCLR 174
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----CLKISCA 137
+F A E L ++ Y C+ C K EA K+ I+K P++ L LKRF Y+ K+S
Sbjct: 175 EFSATETLCNEHKYYCDICCSKQEAQKRMRIKKLPLILALHLKRFKYVEQYNRYTKLSYR 234
Query: 138 VQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV 191
V PL L H N LV+ V+H GS+ GHY + S G + F DD V
Sbjct: 235 VLFPLELRLFNTSHDAVNPDRMYDLVAVVVHCGSTPNRGHYITV-VKSQGFWLLFDDDVV 293
>gi|426358866|ref|XP_004046711.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Gorilla
gorilla gorilla]
Length = 530
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL----KVISGSNN--------- 64
P +I + +A F + ED+HEFL++ ++ + ++ L +V SN+
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFAVDAMKKACLPGHKQVDHHSNDTTLIHQIFG 198
Query: 65 ----------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
L+++LDI S+ +AL Q E L +N YQC C
Sbjct: 199 GYWRSQIRCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYQCGLCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K ++ V IL+LKRF+ + K++ VQ P L+ +M +
Sbjct: 259 QKAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S SGHY G ++ D V AS + V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHSGHYLSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFY 372
>gi|413926008|gb|AFW65940.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 489
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 68/252 (26%), Positives = 109/252 (43%), Gaps = 50/252 (19%)
Query: 6 AACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--- 62
A+ ESG + P I++ L+ I ED+HEFL +L+ + + L + G
Sbjct: 8 ASTLRESGGPLSPSRILSNLRNIGCRLGGGTQEDAHEFLRHLVMSMQAACLDGLGGEKHV 67
Query: 63 -----------------------------------NNLELSLDIY-QLSSLDEALGQFFA 86
N ++L+L+I+ + SL +AL QF A
Sbjct: 68 EPSLQETTLIQQMFGGRLKSKVKCLRCYHESERYENIMDLTLEIHGWVESLQDALTQFTA 127
Query: 87 KEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLE 145
E L DN+Y+C C +A KQ S+ + P + ++LKRF KI+ V P L+
Sbjct: 128 PEDLDGDNMYKCGSCAAYVKARKQLSVHEVPNILTVVLKRFQSGKYGKINKCVTFPDMLD 187
Query: 146 FGKFMHCRRN------LVSAVIHHGS--SSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQ 197
F+ + L + V+H + +SFSGHY G++ D VQ ++
Sbjct: 188 MVPFVTGSGDNPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVQVVSVN 247
Query: 198 QVTN--AYVVIY 207
QV + AY++ Y
Sbjct: 248 QVMSEGAYMLFY 259
>gi|315468039|ref|NP_001186800.1| ubiquitin specific peptidase 3 [Danio rerio]
Length = 524
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 73/287 (25%), Positives = 112/287 (39%), Gaps = 82/287 (28%)
Query: 2 RKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISG 61
RKTL + S +A P+ + + I F Y+ +D+HEFL YL++ +HR +G
Sbjct: 227 RKTLCSLWQGSQTAFSPDALFYVIWKIMPSFRGYQQQDAHEFLRYLLDHLHREMQGNKNG 286
Query: 62 SNN----------------------------------------------------LELSL 69
S + L+LSL
Sbjct: 287 SPSPPVTSDEPNHASESKCFINGTSTIVTSVFGGVLQNEVYCLICGTESRKFDPFLDLSL 346
Query: 70 DIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
DI +L + L F E L LY C KC + ++TK+F I+K
Sbjct: 347 DIPNQFRIKTTKDQEPGPTCTLSDCLRSFTDLEELDETELYMCHKCKKRQKSTKKFWIQK 406
Query: 116 PPIVFILLLKRFNYLCL---KISCAVQVPLY-LEFGKFM---------HCRRNLVSAVIH 162
P V L LKRF++ K+ V+ P+ L+ ++ C +L + V+H
Sbjct: 407 LPKVLCLHLKRFHWTAFLRNKVDTYVEFPMCGLDMKSYLLEPENSLPERCLYDLAAVVVH 466
Query: 163 HGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HGS SGHY G G +++F D V + + V AY++ Y
Sbjct: 467 HGSGIGSGHYTAYGR-HEGQWYHFNDSTVTLVSEEAVLKAKAYILFY 512
>gi|431904918|gb|ELK10055.1| Ubiquitin carboxyl-terminal hydrolase 17-like protein 2 [Pteropus
alecto]
Length = 492
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 105/233 (45%), Gaps = 45/233 (19%)
Query: 19 ELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------------------------G 50
E+I LIA F ++ ED+HEFL++ ++ G
Sbjct: 105 EVIQPATGLIAG-FHRHKQEDAHEFLMFTVDAMQQACLREPERRGRRCGDSTPIRRIFGG 163
Query: 51 IHRSYLKVIS--GSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGY 103
RS +K + G ++ L+++LDI S+ +AL E L DN Y C C
Sbjct: 164 YWRSQVKCLRCHGVSDTLDPYLDITLDIQAAQSVTQALELLVKPEKLDGDNSYHCGVCLE 223
Query: 104 KTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRR------NL 156
K A+K ++ P V IL+LKRF ++ K++ VQ P +L+ +++ + L
Sbjct: 224 KVPASKTLTLHAPSEVLILVLKRFSDFTGSKLAKEVQYPEHLDMRQYLSQQDAGPLEYEL 283
Query: 157 VSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+ ++H G + SGHY C +G + D +V A ++ +AYV+ Y
Sbjct: 284 YAVLVHAGGTCRSGHYFCYIKAGNGQWFKMDDAKVTACDVSSALSQDAYVLFY 336
>gi|301604742|ref|XP_002932001.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 42-like [Xenopus
(Silurana) tropicalis]
Length = 185
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 72/153 (47%), Gaps = 35/153 (22%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------- 56
+ SG I P ++N L+ I+ +F Y ED+HEFL Y ++ + +S L
Sbjct: 14 SNSGGVIKPSAVVNDLRRISKNFRYGSQEDAHEFLRYTVDEMQKSCLRGSCRLDRHTQAT 73
Query: 57 --------------------KVISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDN 94
K +S + + L+L+L+I S+++AL QF E L DN
Sbjct: 74 TLIHQVFGGYLRSRVTCLSCKAVSDTYDQYLDLTLEIKMAHSVNQALEQFVRPEQLDGDN 133
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF 127
Y+C KC A+K+F+I + V L LKRF
Sbjct: 134 AYKCSKCKQMVTASKRFTIHRTSNVLTLSLKRF 166
>gi|109085555|ref|XP_001084204.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Macaca mulatta]
Length = 529
Score = 75.9 bits (185), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 70/270 (25%), Positives = 116/270 (42%), Gaps = 46/270 (17%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL+++++
Sbjct: 139 PGHVIQPSQTLAAGFHRGKQEDAHEFLMFIVDAMKKACLPGHKQVDHDSEDTTLIHQIFG 198
Query: 50 GIHRSYLKVI--SGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K + G ++ L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GCWRSQIKCLHCQGVSDTFDPYLDIALDIRAAQSVKQALEQVVKPEELNGENAYHCGLCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K F++ V IL+LKRF+ + K++ VQ P L+ +M +
Sbjct: 259 QKAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIYELLPSS 213
L + ++H G S +GHY G ++ D +V A ++ V AYV+ Y + S
Sbjct: 319 LYAVLVHAGWSCHNGHYLSFVKAPGGQWYKMDDAKVTACSIASVLSQQAYVLFY-IQKSQ 377
Query: 214 LHHLNSSLH-SSSPGSVEPRTHHRNYMAHE 242
L + S+ PG++ R M E
Sbjct: 378 LERCSESVSMGREPGALGAEHKDRRAMQGE 407
>gi|73979654|ref|XP_854031.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Canis
lupus familiaris]
Length = 535
Score = 75.9 bits (185), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/221 (26%), Positives = 97/221 (43%), Gaps = 45/221 (20%)
Query: 32 FEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN--------------------------- 64
F ++ ED+HE+L+++++ + ++ L S+
Sbjct: 153 FHRHKQEDAHEYLMFILDAMQQACLPEDKLSDPECPQDSTLIQQLFGGYWRSQIQCLHCQ 212
Query: 65 ---------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
L++SLDI S+ +AL Q E L +N Y C KC K A+K ++
Sbjct: 213 GISSTLEPYLDISLDIGDAHSVSQALEQLMKPELLEGENAYHCSKCLEKVPASKVLTLHT 272
Query: 116 PPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSF 168
P V IL+L+RF+ L K++ VQ P L+ + +R L + ++H G S
Sbjct: 273 SPKVLILVLRRFSDLTGNKMTKEVQYPERLDMQHCLSEQRAGPLVYVLYAVLVHTGRSCH 332
Query: 169 SGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
SGHY C +G ++ D +V A ++ AYV+ Y
Sbjct: 333 SGHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYVLFY 373
>gi|242049526|ref|XP_002462507.1| hypothetical protein SORBIDRAFT_02g026980 [Sorghum bicolor]
gi|241925884|gb|EER99028.1| hypothetical protein SORBIDRAFT_02g026980 [Sorghum bicolor]
Length = 867
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/243 (27%), Positives = 112/243 (46%), Gaps = 49/243 (20%)
Query: 14 SAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE------------------------ 49
S + P I+ L I F + ED+HEFL Y I+
Sbjct: 414 SLVSPTGILCHLNEIGVSFGHGAEEDAHEFLRYAIDKMQSASIKEAKKNGIQQLAEETTL 473
Query: 50 ------GIHRSYLKV----ISGSNN---LELSLDIY-QLSSLDEALGQFFAKEYLVRDNL 95
G RS +K +S + L+L+++I +++LD AL +F + E L DN
Sbjct: 474 VHFIFGGYLRSKIKCTKCQVSSKQSERILDLTVEIDGDINTLDGALRRFTSSEVLDGDNR 533
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRR 154
Y C +C A K+ +I + P + + LKR+ L + S V+ P +L ++M
Sbjct: 534 YHCSRCNSYERAQKKLTILEAPNILTIALKRYQSGVLGETSKVVKFPEHLNLSQYMSRTD 593
Query: 155 N------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYV 204
+ L + V+HH +++ SGHY C S G +H D++V+ ++Q+V + AY+
Sbjct: 594 DSSPVYTLYAVVVHHNVSNATVSGHYVCYVKDSQGKWHEMDDNKVKPVSIQKVLSKCAYM 653
Query: 205 VIY 207
++Y
Sbjct: 654 LLY 656
>gi|339254984|ref|XP_003371133.1| ubiquitin carboxyl- hydrolase 36 [Trichinella spiralis]
gi|316960713|gb|EFV48060.1| ubiquitin carboxyl- hydrolase 36 [Trichinella spiralis]
Length = 247
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 97/234 (41%), Gaps = 47/234 (20%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
+++ AA ++ SGS P I ++ + + R ED+HEFL Y ++
Sbjct: 17 VKRVFAAAKSNSGS-FSPTHIAQHIRCVMKSHSHGRQEDAHEFLRYFVDAMQNAALFPYR 75
Query: 50 -------------------GIHRS--------YLKVISGSNNLELSLDIYQLSSLDEALG 82
G HRS Y+ VI L+LSL+I Q ++++ A+
Sbjct: 76 GRNLDIFTQETSIISRIFGGFHRSQIVCNNCQYVSVIYDPF-LDLSLEIKQWNTVEHAMA 134
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
+ E L D+ Y C +C + A K +I P V + LKRF++ KI +
Sbjct: 135 HYTKMETLSNDDAYNCPRCKRRVSARKILTIHSAPNVLTIHLKRFDHFG-KIDRHIGYSD 193
Query: 143 YLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDR 190
+ FM ++ L VIH+G S+ SGHY G +H D R
Sbjct: 194 RMNLRPFMTEKQGPPVNYRLYGVVIHNGRSTNSGHYYAFVCNPLGQWHLMDDSR 247
>gi|359494410|ref|XP_002266179.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Vitis
vinifera]
Length = 906
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 115/282 (40%), Gaps = 67/282 (23%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS-------- 62
ESG + P I++ ++ I ED+HEFL L+ + L+ + G
Sbjct: 436 ESGGPLSPSRILSHMRSINCQIGDGSQEDAHEFLRLLVTSMQSICLEKLGGEREVDARLQ 495
Query: 63 ------------------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLV 91
N ++L+L+I+ + SL++AL QF E L
Sbjct: 496 ETTFIQHTFGGRLRSKVKCLRCHLESERYENIMDLTLEIFGWVESLEDALTQFTTPEDLD 555
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFM 150
+N+Y+C +C A KQ SI + P + ++LKRF KI+ + P L+ FM
Sbjct: 556 GENMYRCRRCTTYVRARKQLSIHEAPNILTIVLKRFQEGRYGKINKCITFPDMLDMIPFM 615
Query: 151 HCRRN------LVSAVIHHGS--SSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN- 201
+ L + V+H + +SFSGHY G++ D VQ + QV +
Sbjct: 616 TGTYDVPPLYMLYAVVVHMDTLNASFSGHYVAYVKDLQGNWFRVDDAEVQPVSTNQVMSE 675
Query: 202 -AYVVIY-----------------ELLPSSLHHLNSSLHSSS 225
AY++ Y + P+S H +S H SS
Sbjct: 676 GAYILFYMRSWPRPPRAFPVKAIQQQAPASAKHCSSKTHKSS 717
>gi|255573501|ref|XP_002527676.1| conserved hypothetical protein [Ricinus communis]
gi|223532981|gb|EEF34747.1| conserved hypothetical protein [Ricinus communis]
Length = 753
Score = 75.5 bits (184), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 66/230 (28%), Positives = 96/230 (41%), Gaps = 51/230 (22%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV-------ISGSNN 64
SG A+ P I++ LK I+ FE Y+ ED+HEFL L++ + R L S NN
Sbjct: 241 SGKAVSPSKIVDNLKQISSCFEKYQQEDAHEFLQCLLDKLERCCLDPGLSDEASSSPENN 300
Query: 65 L-----------------------------ELSLDIYQLSSLDEALGQFFAKEYLVR-DN 94
+ +LSL+I + +L AL F E + D+
Sbjct: 301 IVERVFGGRLVSKLRCCNCGHCSDKYEPLIDLSLEIEDVGNLQSALESFTKVEKIEDVDS 360
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCLKISCAVQVPLYLEFGKF-- 149
+ C C + KQ +++ P V L LKRF KI V+ PL L +
Sbjct: 361 KFICNHCKEEGSREKQLMLDQAPSVSALHLKRFKTDGSFIEKIDKHVEFPLELNLKPYTK 420
Query: 150 --MHCRRNLV-------SAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDR 190
C +N V + V+H+G S SGHY C +S ++H D R
Sbjct: 421 SSQDCNKNQVDLKYQLYAIVVHNGLSPTSGHYFCFVRSSPSTWHKLDDCR 470
>gi|378925630|ref|NP_001243781.1| ubiquitin specific peptidase 17-like family member 10 [Homo
sapiens]
gi|449061953|sp|C9JJH3.1|U17LA_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
10
Length = 530
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 102/235 (43%), Gaps = 44/235 (18%)
Query: 17 IPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE--------------------------- 49
IP +I + +A F + ED+HEFL++ ++
Sbjct: 138 IPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMRKACLPGHKQVDRHSKDTTLIHQIF 197
Query: 50 -GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKC 101
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 198 GGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVC 257
Query: 102 GYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRRN----- 155
+ A+K ++ V IL+LKRF + KI+ VQ P L+ +M +
Sbjct: 258 LQRAPASKTLTLHNSAKVLILVLKRFPDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLVY 317
Query: 156 -LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY+ G ++ D V AS++ V AYV+ Y
Sbjct: 318 VLYAVLVHAGWSCHNGHYSSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>gi|410074817|ref|XP_003954991.1| hypothetical protein KAFR_0A04210 [Kazachstania africana CBS 2517]
gi|372461573|emb|CCF55856.1| hypothetical protein KAFR_0A04210 [Kazachstania africana CBS 2517]
Length = 440
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 62/230 (26%), Positives = 97/230 (42%), Gaps = 49/230 (21%)
Query: 28 IAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN----------------------- 64
I +F Y +D+HEFL +++ +HR Y + +NN
Sbjct: 208 INDNFAGYSQQDAHEFLQFILNRLHRDYKLTSTYTNNTDSCSCLIHSIFQGKLKSSIVCP 267
Query: 65 -------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQF 111
++LSLDI ++L + L F KE L D Y C C + KQ
Sbjct: 268 ECHDNSKTVTDPYIDLSLDIKDKATLYQCLDSFHKKETL-HDYNYHCPNCDTMQDPIKQL 326
Query: 112 SIEKPPIVFILLLKRFNYL----CLKISCAVQVPLYLEFGKFMHCRRNLVS------AVI 161
+I+K P V +L LKRF +L +K++ ++ P YL K+ H N S VI
Sbjct: 327 TIDKLPPVLVLQLKRFEHLNNGQNVKLNAFIEFPTYLNMKKYCHTEENNSSIIYELNGVI 386
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIYEL 209
H + GHY S ++ F D V + + ++V AY++ Y +
Sbjct: 387 SHIGTVNEGHYIATLKLDSNNWFKFNDSMVTSISEEEVLKDQAYLLFYSI 436
>gi|297825441|ref|XP_002880603.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297326442|gb|EFH56862.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 650
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 71/278 (25%), Positives = 121/278 (43%), Gaps = 61/278 (21%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLL-------------------------------Y 46
P II++L I + Y R ED+HE + Y
Sbjct: 238 PMNIISRLPNIGGNLGYGRQEDAHELMRSAIDMMQSVCLDEFGGEKVVPPRAQETTLIQY 297
Query: 47 LIEGIHRSYLKVISGSN-------NLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQC 98
+ G+ +S ++ + SN ++L+++I+ SL+E L QF AKE+L DNLY+C
Sbjct: 298 IFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNLYKC 357
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRR--- 154
++C +A K+ SI P + + LKRF K++ + P + G +M
Sbjct: 358 DRCDDYVKACKRLSIRCAPNILTIALKRFQGGRFGKLNKRISFPETFDLGPYMSSGVEGS 417
Query: 155 ---NLVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H ++SF GHY C G+++ D V+ L+ V AY+++Y
Sbjct: 418 DVYKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRAYMLLY 477
Query: 208 ELL---PSSLHHLNSSLHSSSPGSVEPRTHHRNYMAHE 242
+ PS+L S G E +T N +++
Sbjct: 478 SRVQPRPSNLR--------SEEGQDEKKTDTLNTESNQ 507
>gi|296086860|emb|CBI33027.3| unnamed protein product [Vitis vinifera]
Length = 894
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 72/282 (25%), Positives = 115/282 (40%), Gaps = 67/282 (23%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS-------- 62
ESG + P I++ ++ I ED+HEFL L+ + L+ + G
Sbjct: 465 ESGGPLSPSRILSHMRSINCQIGDGSQEDAHEFLRLLVTSMQSICLEKLGGEREVDARLQ 524
Query: 63 ------------------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLV 91
N ++L+L+I+ + SL++AL QF E L
Sbjct: 525 ETTFIQHTFGGRLRSKVKCLRCHLESERYENIMDLTLEIFGWVESLEDALTQFTTPEDLD 584
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFM 150
+N+Y+C +C A KQ SI + P + ++LKRF KI+ + P L+ FM
Sbjct: 585 GENMYRCRRCTTYVRARKQLSIHEAPNILTIVLKRFQEGRYGKINKCITFPDMLDMIPFM 644
Query: 151 HCRRN------LVSAVIHHGS--SSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN- 201
+ L + V+H + +SFSGHY G++ D VQ + QV +
Sbjct: 645 TGTYDVPPLYMLYAVVVHMDTLNASFSGHYVAYVKDLQGNWFRVDDAEVQPVSTNQVMSE 704
Query: 202 -AYVVIY-----------------ELLPSSLHHLNSSLHSSS 225
AY++ Y + P+S H +S H SS
Sbjct: 705 GAYILFYMRSWPRPPRAFPVKAIQQQAPASAKHCSSKTHKSS 746
>gi|168044470|ref|XP_001774704.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162674004|gb|EDQ60519.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 411
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 58/230 (25%), Positives = 101/230 (43%), Gaps = 48/230 (20%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN------------- 64
P I+++++ I +H Y R ED+HEF+ + I+ + L G +
Sbjct: 181 PIRILSRIRNIGNHLGYGRQEDAHEFMRFAIDSMQSICLDEFGGEKDVDPATQETTLIHH 240
Query: 65 -------------------------LELSLDIYQL-SSLDEALGQFFAKEYLVRDNLYQC 98
++L+++I+ + SL++A+ QF E L DN Y+C
Sbjct: 241 IFGGHLQSQVKCMQCHHESNRYESMMDLAVEIHGVVDSLEDAIAQFTTIEMLDGDNKYKC 300
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN-- 155
++C A KQ ++ + P V + LKRF K++ V P L+ +M +
Sbjct: 301 DRCNAYVRARKQLTVYEAPNVLTIALKRFQSGKFGKLNKRVTFPEVLDMSPYMSGANDHP 360
Query: 156 ----LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV 199
L + V+H ++SF GHY C S+G ++ D +VQ L+ V
Sbjct: 361 LLYRLYAVVVHVDMLNASFFGHYICFVKDSNGVWYKIDDRKVQRHYLRAV 410
>gi|15088628|gb|AAK84135.1|AF393637_1 deubiquitinating enzyme 2A [Mus musculus]
Length = 545
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 57/231 (24%), Positives = 102/231 (44%), Gaps = 44/231 (19%)
Query: 21 IINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV---------------------- 58
++ +++ F ++ ED+HEFL++ +E +H S L+V
Sbjct: 115 VMKPSQILTSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSEPTSEDSSPIHDIFGGLW 174
Query: 59 --------ISGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKT 105
G+++ L++ LDI S+++AL E L +N Y C +C K
Sbjct: 175 RSQIKCLHCQGTSDTYDRFLDVPLDISSAQSVNQALWDTEKSEELRGENAYYCGRCRQKM 234
Query: 106 EATKQFSIEKPPIVFILLLKRFNY-LCLKISCAVQVPLYLEFGKFMHCRRN------LVS 158
A+K I P V +L+LKRF+ + K+ V P +L+ ++ L +
Sbjct: 235 PASKTLHIHSAPKVLLLVLKRFSASMGNKLDRKVSYPEFLDLKPYLSQPTGGPLPYALYA 294
Query: 159 AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
++H G++ SGHY G ++ D +V + ++ V NAYV+ Y
Sbjct: 295 VLVHEGATCHSGHYFSYVKAGHGKWYKMDDTKVTSCDVTSVLNENAYVLFY 345
>gi|357620428|gb|EHJ72623.1| hypothetical protein KGM_20167 [Danaus plexippus]
Length = 563
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 67/257 (26%), Positives = 108/257 (42%), Gaps = 62/257 (24%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS----------- 60
S +AI PE + + + F Y+ +D+HEFL Y+++ +H +++
Sbjct: 301 SKAAISPECLFLVIWKVVPRFRGYQQQDAHEFLRYMLDRLHTELQQLVPDRPEGVKAPAS 360
Query: 61 -------------------GSNN------LELSLDIYQLS------SLDEALGQFFAKEY 89
G+ + L+LSL++ + SL + L F E
Sbjct: 361 IVTAVFGGTLQSEVRCLACGTESKKFDPFLDLSLELPESGRHDAPVSLTDCLASFVQIEE 420
Query: 90 LVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF---NYLCLKISCAVQVPLY-LE 145
L Y C C K ++TKQF I + P V L LKRF NY K+ ++ PL L+
Sbjct: 421 LADTERYFCSSCKCKQKSTKQFWIRRLPNVLCLHLKRFRWHNYFRTKVDTSISFPLLSLD 480
Query: 146 FGKFM-----HCRR--------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQ 192
F+ RR +L + ++HHGS + SGHY +H F D V+
Sbjct: 481 MSGFVLPNVPDTRRSGRGSLLYDLAAVIVHHGSGAGSGHYTAFAINEEQWFH-FNDQTVR 539
Query: 193 ASNLQQVTNA--YVVIY 207
A++ V + Y++ Y
Sbjct: 540 ATDSAAVASCKPYILFY 556
>gi|222623104|gb|EEE57236.1| hypothetical protein OsJ_07224 [Oryza sativa Japonica Group]
Length = 451
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 23/170 (13%)
Query: 47 LIEGIHRSYLKVISGSNN--------------LELSLDIYQLSSLDEALGQFFAKEYLVR 92
L+ +HR++ +++ +LS+D+ Q SSL L FF+ E L
Sbjct: 248 LVTLVHRTFQGILTNETKCLMCDTITAKDETFFDLSIDVEQNSSLTSCLKSFFSTEILNG 307
Query: 93 DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-----KISCAVQVPLYLEFG 147
++ + C+KC EA K+ I+K P V ++ LKRF Y+ K+S V PL L+ G
Sbjct: 308 EDKFFCDKCSSLQEAHKRMKIKKAPHVLVIHLKRFKYVEQLSRHKKLSYRVVYPLELKLG 367
Query: 148 KF---MHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQAS 194
C +L + V+H GSS GHY S G++ F DD VQ S
Sbjct: 368 SMSEDADCEYSLFAVVVHVGSSPNHGHY-VSQIKSHGNWLSFDDDTVQIS 416
>gi|390363573|ref|XP_781718.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3
[Strongylocentrotus purpuratus]
Length = 503
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 70/275 (25%), Positives = 114/275 (41%), Gaps = 69/275 (25%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHR------- 53
+RKTL A +AI P+ + + I F Y+ +D+HEF+ YL++ +H
Sbjct: 208 IRKTLCALWQGDQTAISPDSLFTVMWKIFPRFRGYQQQDAHEFMRYLLDRLHTELQGSTW 267
Query: 54 ------------SYLKVISG-------------------SNNLELSLDI----------- 71
+ + VI G L++SLDI
Sbjct: 268 PTTPKKQTNGHATIVSVIFGGLLLSEVTCRPCGSLYKKIDPFLDVSLDIPERFRPRSKNK 327
Query: 72 --YQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY 129
Q+ L + + F A E L Y C KC + +TK+F ++ P V + LKRF +
Sbjct: 328 DGSQVCRLQDCMQSFIAVEELEETEQYMCPKCQQRQPSTKKFWLKAIPNVLCIHLKRFTW 387
Query: 130 ---LCLKISCAVQVPLY-LEFGKFM---HCRR--------NLVSAVIHHGSSSFSGHYNC 174
L KI VQ P+ L+ FM C+ +L + ++H GS + +GHY
Sbjct: 388 SGFLRTKIDTYVQFPMKGLDIQPFMLGPECQDENVSTTVYDLAAVIVHQGSGAGAGHYIA 447
Query: 175 IGSTSSGSYHYFGDDRVQASNLQQVT--NAYVVIY 207
+ ++G ++ F D V + +T AY++ Y
Sbjct: 448 F-AVNNGQWYCFNDSTVTPVEEKVITRCKAYILFY 481
>gi|444724306|gb|ELW64916.1| Ubiquitin carboxyl-terminal hydrolase 42 [Tupaia chinensis]
Length = 1157
Score = 75.1 bits (183), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 58/216 (26%), Positives = 94/216 (43%), Gaps = 48/216 (22%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVF 120
GSN KC A+K+F+I + V
Sbjct: 216 GSN------------------------------------KCKKMVPASKRFTIHRSSNVL 239
Query: 121 ILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
L LKRF N+ KI+ V+ P YL+ +M L + ++H G + +GHY
Sbjct: 240 TLSLKRFANFTGGKIAKDVKYPEYLDIRPYMSQPNGEPIIYVLYAVLVHTGFNCHAGHYF 299
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
C S+G ++ D V S+++ V AYV+ Y
Sbjct: 300 CYIKASNGLWYQMNDSIVSTSDIRSVLSQQAYVLFY 335
>gi|331232103|ref|XP_003328714.1| hypothetical protein PGTG_10673 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|309307704|gb|EFP84295.1| hypothetical protein PGTG_10673 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 690
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 64/233 (27%), Positives = 95/233 (40%), Gaps = 46/233 (19%)
Query: 15 AIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------------ 56
AI P I L A R ED+HEFL L+E + L
Sbjct: 250 AIEPSPINRALSKFAPTMRGGRQEDAHEFLRLLVEAMQNGALQGRAEKAKQKQKESTFVH 309
Query: 57 KVISG------------------SNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQC 98
++ G N L+LSLDI Q +S+ AL + + L N Y+C
Sbjct: 310 RMFGGKLRSRVVCEHCNTPSDTFDNFLDLSLDISQANSVSSALKAYHKFDRLRGANQYKC 369
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMHCRRNLV- 157
+KC +A K S+ P + L LKRFN+ KI+ V L+ M ++
Sbjct: 370 DKCKCLRDAKKSMSVFSAPPILTLHLKRFNFRGRKINKRVNFEDSLDLKPAMSNESDITG 429
Query: 158 ----SAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVI 206
+ V H G S+ SGHY S+G + Y DD S ++ ++++ V+
Sbjct: 430 YKLYAVVCHRGQSNKSGHYYAHVKASNGKW-YVADD----STVESISDSRTVL 477
>gi|326919202|ref|XP_003205871.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Meleagris
gallopavo]
Length = 578
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 300 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 359
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 360 KLKNGNMNEAEENNKQELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 419
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 420 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 479
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G ++ R +LV+ V+H GS GHY I S G +
Sbjct: 480 TKLSYRVVFPLELRLFNTSGDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 538
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 539 FDDDIVEKIDAQAIEEFYGLTSDISKNS 566
>gi|323447154|gb|EGB03098.1| hypothetical protein AURANDRAFT_2843 [Aureococcus anophagefferens]
Length = 277
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 57/217 (26%), Positives = 92/217 (42%), Gaps = 28/217 (12%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH------RSYLKVISG---SNNLE-- 66
P ++ +L+ + F+ R ED+HEFLL L++ + + ++ + G S+ L
Sbjct: 62 PRELVKRLRAVGDQFQPGRQEDAHEFLLALLDAVEPPLSSTANPVRAVFGGRTSSTLRCP 121
Query: 67 ------------LSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
L L + +L AL F A E L D + C CG + TK+ +
Sbjct: 122 ECDYESATEEPFLDLSLEPKPTLARALDAFTAPEELENDE-WCCRCCGERVRPTKRLGVA 180
Query: 115 KPPIVFILLLKRFNYLCLKIS--CAVQVPLYLEFGKFMHCRRNLVSAVIHHGSSSFSGHY 172
P ++ L R++ KI A + L LE LV ++H G S+ GHY
Sbjct: 181 AAPKALVVHLNRYDGRGGKIEEHVAFEPRLELETTDGGAASYGLVGVLVHRGQSTRCGHY 240
Query: 173 NCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
T SG++ F D V+ +V AY++ Y
Sbjct: 241 TAFCRTRSGAWSCFDDAAVRTCTFAEVLRQEAYMLFY 277
>gi|164660262|ref|XP_001731254.1| hypothetical protein MGL_1437 [Malassezia globosa CBS 7966]
gi|159105154|gb|EDP44040.1| hypothetical protein MGL_1437 [Malassezia globosa CBS 7966]
Length = 574
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/294 (24%), Positives = 118/294 (40%), Gaps = 69/294 (23%)
Query: 14 SAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH--------------------- 52
SA+ P ++ L+ A R ED+HE+L L+E +
Sbjct: 200 SAVSPTAFVSNLRKFARPLRPGRQEDAHEYLRLLLEALQQACTCFAGKDIKPNDPILSTT 259
Query: 53 ----------RSYLKVISGSNN-------LELSLDIYQ-LSSLDEALGQFFAKEYLVRDN 94
RS + S +N L+LSLD+ + + ++ +AL F A E L +
Sbjct: 260 LIQRIFGGRLRSRVTCYSCRHNSDTYDPMLDLSLDVRKGIHTVKQALDAFTAAEALA--D 317
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMHCRR 154
YQC+ C + EATK+FSI++ P+V + LKRF KI+ + L G++M R
Sbjct: 318 KYQCDHCQRRVEATKRFSIDQAPMVLTVHLKRFGIFGNKINKPISYSDRLHLGRYMSERD 377
Query: 155 NLVS---------------------AVIHH-GSSSFSGHYNCIGSTSSGSYHYFGDDRVQ 192
+ A++HH GS GHY + S S + D
Sbjct: 378 KGLGADVEDEPDLGTLGAAQQYRLFAIVHHYGSGPNVGHY--VASVRSADGQWLRMDDSF 435
Query: 193 ASNLQQV----TNAYVVIYELLPSSLHHLNSSLHSSSPGSVEPRTHHRNYMAHE 242
S L Q +AY++ Y P ++ + +SP + + R+ H+
Sbjct: 436 VSKLPQCPLDDPSAYLLFYLREPITMEESSKPTTMTSPKKRKAASIKRDDDGHD 489
>gi|125561915|gb|EAZ07363.1| hypothetical protein OsI_29613 [Oryza sativa Indica Group]
Length = 978
Score = 74.7 bits (182), Expect = 3e-11, Method: Composition-based stats.
Identities = 71/267 (26%), Positives = 121/267 (45%), Gaps = 51/267 (19%)
Query: 15 AIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE-------------GIHR-----SYL 56
A+ P I++ L I F + ED+HEFL Y I+ G HR + +
Sbjct: 511 ALSPTGILSHLPDIGSSFGPGKQEDAHEFLRYAIDAMQSVCMKEARKSGTHRLHEETTLM 570
Query: 57 KVISG---------------SNNLELSLDIY-----QLSSLDEALGQFFAKEYLVRDNLY 96
++I G S E LD+ +SSL+ AL +F + E L DN Y
Sbjct: 571 QLIFGGYLRSKIRCTRCDATSEQHERILDLTVEIDGDISSLEGALERFTSTEVLDGDNKY 630
Query: 97 QCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN 155
+C +C A K+ +I + P V + LKR+ KI+ A++ P L ++M + +
Sbjct: 631 KCSRCKSHERAKKKLTISEAPNVLTIALKRYQSGKFGKINKAIRFPETLNLQRYMSPKAD 690
Query: 156 LVS-------AVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYV 204
S + +HH +++FSGHY C + G ++ D +V+ +L+ V + AY+
Sbjct: 691 DTSPGLQPVCSGVHHDIMNAAFSGHYVCYVKDTHGKWYKTDDSQVKPVSLENVMSKCAYM 750
Query: 205 VIY-ELLPSSLHHLNSSLHSSSPGSVE 230
++Y P + + +L + P V+
Sbjct: 751 LLYARCSPRAPSSVRPALMAQDPARVK 777
>gi|449662479|ref|XP_002167244.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Hydra
magnipapillata]
Length = 503
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 76/274 (27%), Positives = 110/274 (40%), Gaps = 68/274 (24%)
Query: 1 MRKTLAA-CQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK-- 57
+RK L A Q S +AI PE + + + F Y+ D+HEF+ L++ +H L
Sbjct: 213 LRKVLCALWQQGSNTAISPESLFTVVWKVVPRFRGYQQHDAHEFMHCLLDRVHNELLTSK 272
Query: 58 --------VISGSNNLELSLDIYQLS--------------SLD----------------- 78
+ISG +L D+ L+ SLD
Sbjct: 273 RFTNGCDTIISGIFGGQLQSDVTCLTCGTISKKQEAYRDLSLDIPFKPKLKTSPGKKKTP 332
Query: 79 ------EALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL 132
+ L F E L Y CEKC K +TK+F I + P V L LKRF Y L
Sbjct: 333 SACQLIDCLQSFVEMETLDESEWYMCEKCNKKQPSTKKFWILRLPNVLCLHLKRFRYSPL 392
Query: 133 ---KISCAVQVPLY-LEFGKFM-----HCRR--------NLVSAVIHHGSSSFSGHYNCI 175
K+ V+ P+ L F+ R +L + V+HHGS + SGHY
Sbjct: 393 ARTKVDTFVRFPIKELNMDPFILKTNQKTNRMSIKAHLYDLAACVVHHGSGAGSGHYTTY 452
Query: 176 GSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
GS++ F D V +N + + AY++ Y
Sbjct: 453 AR-HEGSWYNFNDSSVSLTNEESIQHCKAYILFY 485
>gi|168037578|ref|XP_001771280.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162677369|gb|EDQ63840.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 336
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 65/244 (26%), Positives = 111/244 (45%), Gaps = 53/244 (21%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFL---LYLIEGI----------------HRSYLKV 58
P I++ L+ IA Y ED+HEF+ ++L++ I ++
Sbjct: 88 PSGILSHLRSIARGLNYGNQEDAHEFMSSAIHLMQSICLDEAGGEKGVDSCTQQTTFTHH 147
Query: 59 ISG---------------SNNLELSLDIY-----QLSSLDEALGQFFAKEYLVRDNLYQC 98
I G SN E+ +D+ + SL++ALG F A E L +N Y+C
Sbjct: 148 IFGGLLQSQVKCNQCHLQSNRYEVMMDLAVEIPGNVRSLEDALGVFTAPEILDGENKYKC 207
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----LKISCAVQVPLYLEFGKFMHCRR 154
+C +A KQ ++ + P + ++ LKRF L K++ V P L+ G +M R
Sbjct: 208 NRCDAYVDAYKQLTVHEAPNILVVTLKRFKSLQGGRYGKLTNYVAFPEVLDMGPYMSGNR 267
Query: 155 NLVS-----AVIHHGS---SSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYV 204
L AV+ H S ++ +GHY C+ +G ++ D +V + VT+ AY+
Sbjct: 268 GLTPVYNLYAVVVHASVSNAAHNGHYFCLVKNPNGYWYRADDAKVTEVGVDWVTSQEAYI 327
Query: 205 VIYE 208
++Y+
Sbjct: 328 LLYK 331
>gi|125539986|gb|EAY86381.1| hypothetical protein OsI_07760 [Oryza sativa Indica Group]
Length = 415
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 23/170 (13%)
Query: 47 LIEGIHRSYLKVISGSNN--------------LELSLDIYQLSSLDEALGQFFAKEYLVR 92
L+ +HR++ +++ +LS+D+ Q SSL L FF+ E L
Sbjct: 212 LVTLVHRTFQGILTNETKCLMCDTITAKDETFFDLSIDVEQNSSLTSCLKSFFSTEILNG 271
Query: 93 DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-----KISCAVQVPLYLEFG 147
++ + C+KC EA K+ I+K P V ++ LKRF Y+ K+S V PL L+ G
Sbjct: 272 EDKFFCDKCSSLQEAHKRMKIKKAPHVLVIHLKRFKYVEQLSRHKKLSYRVVYPLELKLG 331
Query: 148 KF---MHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQAS 194
C +L + V+H GSS GHY S G++ F DD VQ S
Sbjct: 332 SMSEDADCEYSLFAVVVHVGSSPNHGHY-VSQIKSHGNWLSFDDDTVQIS 380
>gi|260832998|ref|XP_002611444.1| hypothetical protein BRAFLDRAFT_63924 [Branchiostoma floridae]
gi|229296815|gb|EEN67454.1| hypothetical protein BRAFLDRAFT_63924 [Branchiostoma floridae]
Length = 349
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 71/260 (27%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLKVIS 60
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ + + K I+
Sbjct: 77 ATQKKKVGVIAPKKFIARLRKENELFDNYMQQDAHEFLNYLLNTVADLLQAEKQQAKGIN 136
Query: 61 GSNN------------------------------------LELSLDIYQLSSLDEALGQF 84
G++N L+LS+D+ Q +S+ L F
Sbjct: 137 GTDNNTKSDPTWVHDIFQGTLTNETRCLCCETVSSKDEDFLDLSVDVDQNTSITHCLRGF 196
Query: 85 FAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQ 139
E L + Y CE C K EA K+ ++K P++ L LKRF Y+ K+S V
Sbjct: 197 SNTETLCSEYKYYCEMCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVV 256
Query: 140 VPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
PL L N LV+ VIH GS GHY I S G + F DD V+
Sbjct: 257 FPLELRLFNTSDDAVNADKIYDLVAVVIHCGSGPNRGHYITI-VKSHGFWLLFDDDIVEK 315
Query: 194 SNLQQVTNAYVVIYELLPSS 213
+ + + Y + ++ +S
Sbjct: 316 IDAHAIEDFYGLTSDIQKTS 335
>gi|115446845|ref|NP_001047202.1| Os02g0573400 [Oryza sativa Japonica Group]
gi|46806341|dbj|BAD17530.1| putative ubiquitin-specific protease 3 (UBP3) [Oryza sativa
Japonica Group]
gi|113536733|dbj|BAF09116.1| Os02g0573400 [Oryza sativa Japonica Group]
Length = 415
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 55/170 (32%), Positives = 82/170 (48%), Gaps = 23/170 (13%)
Query: 47 LIEGIHRSYLKVISGSNN--------------LELSLDIYQLSSLDEALGQFFAKEYLVR 92
L+ +HR++ +++ +LS+D+ Q SSL L FF+ E L
Sbjct: 212 LVTLVHRTFQGILTNETKCLMCDTITAKDETFFDLSIDVEQNSSLTSCLKSFFSTEILNG 271
Query: 93 DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-----KISCAVQVPLYLEFG 147
++ + C+KC EA K+ I+K P V ++ LKRF Y+ K+S V PL L+ G
Sbjct: 272 EDKFFCDKCSSLQEAHKRMKIKKAPHVLVIHLKRFKYVEQLSRHKKLSYRVVYPLELKLG 331
Query: 148 KF---MHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQAS 194
C +L + V+H GSS GHY S G++ F DD VQ S
Sbjct: 332 SMSEDADCEYSLFAVVVHVGSSPNHGHY-VSQIKSHGNWLSFDDDTVQIS 380
>gi|291234105|ref|XP_002736998.1| PREDICTED: deubiquitinating enzyme 1-like [Saccoglossus
kowalevskii]
Length = 349
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/260 (28%), Positives = 107/260 (41%), Gaps = 54/260 (20%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLKVIS 60
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I + K +
Sbjct: 77 ASQKKKVGVIAPKKFIARLRKENELFDNYMQQDAHEFLNYLLNTIADLLQAEKQGGKPKN 136
Query: 61 GSNN------------------------------------LELSLDIYQLSSLDEALGQF 84
G++N L+LS+D+ Q +S+ L F
Sbjct: 137 GNDNQIKPEPTWVHDIFQGTLTNETRCLCCEAVSSKDEDFLDLSVDVDQNTSITHCLRGF 196
Query: 85 FAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQ 139
+ E L + Y CE C K EA K+ ++K P++ L LKRF Y+ K+S V
Sbjct: 197 SSTETLCSEYKYYCENCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRYTKLSYRVV 256
Query: 140 VPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
PL L N LV+ VIH GS GHY I S G + F DD V+
Sbjct: 257 FPLELRLMNTSDDAFNPDKLYDLVAVVIHCGSGPNRGHYITI-VKSHGFWLLFDDDIVEK 315
Query: 194 SNLQQVTNAYVVIYELLPSS 213
+ Q + Y + +L +S
Sbjct: 316 IDAQAIEEFYGLTSDLQKTS 335
>gi|410908263|ref|XP_003967610.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Takifugu
rubripes]
Length = 612
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 115/288 (39%), Gaps = 83/288 (28%)
Query: 2 RKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLI------------- 48
RKTL + S +A P+ + + I F Y+ +D+HEF+ YL+
Sbjct: 224 RKTLCSLWQGSQTAFSPDSLFYTIWKIMPSFRGYQQQDAHEFMRYLLDHLHRELQYGRNG 283
Query: 49 --------EGIHRSYLK--------------------------VISGSNN------LELS 68
+G+ S +I G+ + L+LS
Sbjct: 284 ASHAASPQDGVRLSAADGKCCINGTASVVTSIFGGILQNEVNCLICGTESRKFDPFLDLS 343
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI +L + L F E L LY C KC + ++TK+F ++
Sbjct: 344 LDIPSQFRQKRSKDQEPGPTCTLSDCLRSFTDLEELDETELYFCHKCKKRQKSTKKFWVQ 403
Query: 115 KPPIVFILLLKRFNYLCL---KISCAVQVPLY-LEFGKFM---------HCRRNLVSAVI 161
K P V L LKRF++ KI V+ PL L+ ++ C +LV+ V+
Sbjct: 404 KLPKVLCLHLKRFHWTAFLRNKIDTYVEFPLKGLDMRGYLLEPENSLPESCVYDLVAVVV 463
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY GS G +++F D V +N V AY++ Y
Sbjct: 464 HHGSGVGSGHYTAYGS-HEGCWYHFNDSTVTLTNEDAVRKAKAYILFY 510
>gi|224116680|ref|XP_002317364.1| predicted protein [Populus trichocarpa]
gi|222860429|gb|EEE97976.1| predicted protein [Populus trichocarpa]
Length = 777
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 103/247 (41%), Gaps = 50/247 (20%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS-------- 62
E G + P I+ ++ I H ED+HEFL LI + L+ + G
Sbjct: 438 ECGGPLSPSRILLHMRNINHQIGDGSQEDAHEFLRLLIASMQSICLEKLGGEDKVDPRLQ 497
Query: 63 ------------------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLV 91
N ++L+L+I+ + SL++AL QF E L
Sbjct: 498 ETTFIQHTFGGRLRSKVKCLRCHHESERYENIMDLTLEIFGWVKSLEDALTQFTTPEELD 557
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFM 150
+N+Y+C +C A KQ SI + P + ++LKRF KI+ + P L+ FM
Sbjct: 558 GENMYRCGRCAAYVRARKQLSIHEAPNILTIVLKRFQEGKYGKINKCITFPDMLDMIPFM 617
Query: 151 HCRRN------LVSAVIHHGS--SSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVT-- 200
+ L + V+H + +SFSGHY GS+ D V ++ QV
Sbjct: 618 TGTGDVPPLYMLYAVVVHLDTLNASFSGHYVAYVKDLQGSWFRIDDTEVHPVSMSQVMLE 677
Query: 201 NAYVVIY 207
AY++ Y
Sbjct: 678 GAYILFY 684
>gi|67594014|ref|XP_665769.1| hypothetical protein [Cryptosporidium hominis TU502]
gi|54656592|gb|EAL35536.1| hypothetical protein Chro.80498, partial [Cryptosporidium hominis]
Length = 671
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 64/264 (24%), Positives = 107/264 (40%), Gaps = 57/264 (21%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK--- 57
M + ++ ++ I KLI F D+ EFL Y +E +H+S L
Sbjct: 168 MLDNTSKSNIKNDQPVVSSFIKCAQKLIWKRFRIGMMHDAQEFLRYFLEALHKSCLPKNL 227
Query: 58 ----------VISGSNN-----------------------------LELSLDIYQLSSLD 78
I+ S +++ LDI +S+L+
Sbjct: 228 QTDQTFRKIHPIAASTTYIGQLFCGFFLSRIVCHNCQYTSNTYDPFMDVPLDIMGVSNLE 287
Query: 79 EALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL---CLKIS 135
AL F EYL +N Y C KC +++A+KQ IEK P + + LKRF+Y+ K +
Sbjct: 288 NALKLFTKIEYLKGENRYMCPKCNQRSDASKQLLIEKLPPLLTIQLKRFSYVGHGSRKPN 347
Query: 136 CAVQVPLYLEFGKFMHCRR--------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFG 187
A+ L+ ++ + L + V H G++ GHY + ++ F
Sbjct: 348 KAINFSDVLDLQPYISSKTYSESSYIYKLWAVVCHSGNTLSCGHYYTHAKSIDNKWYCFN 407
Query: 188 DDRVQASNLQQVTN----AYVVIY 207
DD V+ + ++ V N AY++ Y
Sbjct: 408 DDYVKPTRIENVLNENHKAYLLFY 431
>gi|50746997|ref|XP_420711.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Gallus gallus]
gi|449500647|ref|XP_002193246.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Taeniopygia
guttata]
Length = 366
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 111/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 88 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 147
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 148 KLKNGNMNEAEENNKQELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 207
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 208 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 267
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G ++ R +LV+ V+H GS GHY I S G +
Sbjct: 268 TKLSYRVVFPLELRLFNTSGDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 326
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISKNS 354
>gi|356529718|ref|XP_003533435.1| PREDICTED: uncharacterized protein LOC100808015 [Glycine max]
Length = 730
Score = 74.3 bits (181), Expect = 4e-11, Method: Composition-based stats.
Identities = 69/278 (24%), Positives = 114/278 (41%), Gaps = 63/278 (22%)
Query: 13 GSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---------------- 56
G + P +N L + F Y+ ED+HEF+ ++ + R +L
Sbjct: 186 GGTLSPLKFVNNLNYFSSDFRRYQQEDAHEFMQCALDKLERCFLDLKKSNLNFEDDNLVE 245
Query: 57 KVISG--------------SNNLE----LSLDIYQLSSLDEALGQFFAKEYLVRDNLYQC 98
KV G SN E +SL+I + SL AL F E + D ++C
Sbjct: 246 KVFGGRFISKLQCSTCGHTSNTFEPLIDMSLEIDNVDSLPSALESFTKVENI--DENFRC 303
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFN---YLCLKISCAVQVPLYLEFGKF------ 149
+ C + KQ +++ P V L LKRF L KI + PL L+ +
Sbjct: 304 DNCKEEVSMEKQLMLDQTPSVAALHLKRFKTNGILVEKIDKHIDFPLELDLQPYTIKVME 363
Query: 150 -------MHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN- 201
+ + +L + V+H G SS SGHY C ++ ++H D V ++ V +
Sbjct: 364 DLVAENDVPLKYDLYAIVVHTGLSSTSGHYFCFVRSAPDTWHKLDDSMVTKVSVDSVLSQ 423
Query: 202 -AYVVIY---------ELLPSSLHHLNSSLHSSSPGSV 229
AY++ Y ++ L+ ++ ++SP SV
Sbjct: 424 EAYILFYARQGTPWFSSIMEEKTQCLDPNIMTTSPKSV 461
>gi|147832982|emb|CAN68406.1| hypothetical protein VITISV_035043 [Vitis vinifera]
Length = 945
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 72/285 (25%), Positives = 115/285 (40%), Gaps = 70/285 (24%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS-------- 62
ESG + P I++ ++ I ED+HEFL L+ + L+ + G
Sbjct: 472 ESGGPLSPSRILSHMRSINCQIGDGSQEDAHEFLRLLVTSMQSICLEKLGGEREVDARLQ 531
Query: 63 ---------------------------------NNLELSLDIY-QLSSLDEALGQFFAKE 88
N ++L+L+I+ + SL++AL QF E
Sbjct: 532 ETTFIQHTFGGRLRSKCNQVKCLRCHLESERYENIMDLTLEIFGWVESLEDALTQFTTPE 591
Query: 89 YLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFG 147
L +N+Y+C +C A KQ SI + P + ++LKRF KI+ + P L+
Sbjct: 592 DLDGENMYRCRRCTTYVRARKQLSIHEAPNILTIVLKRFQEGRYGKINKCITFPDMLDMI 651
Query: 148 KFMHCRRN------LVSAVIHHGS--SSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV 199
FM + L + V+H + +SFSGHY G++ D VQ + QV
Sbjct: 652 PFMTGTYDVPPLYMLYAVVVHMDTLNASFSGHYVAYVKDLQGNWFRVDDAEVQPVSTNQV 711
Query: 200 TN--AYVVIY-----------------ELLPSSLHHLNSSLHSSS 225
+ AY++ Y + P+S H +S H SS
Sbjct: 712 MSEGAYILFYMRSWPRPPRAFPVKAIQQQAPASAKHCSSKTHKSS 756
>gi|307204808|gb|EFN83366.1| Ubiquitin carboxyl-terminal hydrolase 3 [Harpegnathos saltator]
Length = 550
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 66/268 (24%), Positives = 111/268 (41%), Gaps = 72/268 (26%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS--------- 60
+G AI PE + + + F Y+ +D+HEFL Y+++ +H L+++
Sbjct: 274 GSNGQAISPECLFLAIWKVVPRFRGYQQQDAHEFLTYMLDRLHTELLQLLPRLGHEPPGL 333
Query: 61 -GSNNL-----------------------------ELSLDI-----------YQLSSLDE 79
G ++ +LSLDI ++ SL
Sbjct: 334 RGKQSIVTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTY 393
Query: 80 ALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----LKIS 135
+L +FF E L LY C+ C K +TK+F I + P V L +KRF + C K+
Sbjct: 394 SLTRFFKVEELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRW-CNSYRSKVD 452
Query: 136 CAVQVPL-YLEFGKF----MHCRR---------NLVSAVIHHGSSSFSGHYNCIGSTSSG 181
V P+ L+ F M R +L + ++HHGS + +GHY + G
Sbjct: 453 TQVDFPMESLDMSAFTVRGMTGTRLGAQNSHLYDLAAVIVHHGSGAGTGHYTAF-AVHDG 511
Query: 182 SYHYFGDDRVQASNLQQVTNA--YVVIY 207
+ +F D V+ ++ + V Y++ Y
Sbjct: 512 QWFHFNDSSVRPASTESVAKCKPYILFY 539
>gi|403280795|ref|XP_003931895.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 36 [Saimiri
boliviensis boliviensis]
Length = 1119
Score = 73.9 bits (180), Expect = 5e-11, Method: Composition-based stats.
Identities = 77/299 (25%), Positives = 115/299 (38%), Gaps = 74/299 (24%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSMCKSVSDTYDPYLDIALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEK--------------CGYKTEATKQFSIEKPPIVFILLLKRFNYLC 131
+ L +N Y C K C T A K + + L Y+
Sbjct: 290 KADVLSGENAYMCAKIMAVLSRVSSVLSWCAQPTAAMPAAITAKNDVGYPEFLNIRPYMS 349
Query: 132 LKISCAVQVPLYLEFGKFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV 191
V LY + ++H G S +GHY C S+G ++ D V
Sbjct: 350 QNNGDPVMYGLY--------------AVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLV 395
Query: 192 QASNLQQVTN--AYVVIYELLPSS-------LHHLNSSLHSSSPGSVEPRTHHRNYMAH 241
+SN++ V N AYV+ Y +P S + SS S P SV P H + M H
Sbjct: 396 HSSNVKVVLNQQAYVLFYLRIPGSKKSPEGPISKTGSSSLPSRP-SVAP-DHSKKNMGH 452
>gi|341875422|gb|EGT31357.1| hypothetical protein CAEBREN_29462 [Caenorhabditis brenneri]
Length = 551
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 62/231 (26%), Positives = 96/231 (41%), Gaps = 51/231 (22%)
Query: 28 IAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV----------------------------- 58
+ F +R D+HEF+ YL++ +H K
Sbjct: 314 VCTRFRGFRQHDAHEFMKYLLDQMHTELKKCKNLPEMPEDDEKVTPLSRHFEGMLQSSVV 373
Query: 59 --ISG--SNNLE----LSLDIYQLSS----LDEALGQFFAKEYLVRDNLYQCEKCGYKTE 106
+ G SN L+ LSLDI ++S L + L FF KE L + + C KC K
Sbjct: 374 CQVCGNCSNKLDEFWDLSLDIPRISKPRIRLSDCLSDFFKKEILEKGDKPMCSKCNTKQT 433
Query: 107 ATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLY-LEFGKFMH-------CRRNLVS 158
+KQ I+K P V L +KRF KI ++ P+ L +F+ C L S
Sbjct: 434 CSKQLFIKKLPEVLCLQIKRFKDGGGKIDTLIEFPMQSLSVDEFLTEDSDEPPCTYELQS 493
Query: 159 AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVT--NAYVVIY 207
++H G SGHY G +++F D +V + ++ AY+++Y
Sbjct: 494 IIVHVGYGCQSGHYVAFGRRGGAKWYHFDDTKVTTAEPSLISKQKAYLLLY 544
>gi|402912553|ref|XP_003918821.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 69/264 (26%), Positives = 114/264 (43%), Gaps = 46/264 (17%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL+++++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFIVDAMKKACLPGHKQADHDSEDTTLIHQIFG 198
Query: 50 GIHRSYLKVI--SGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K + G ++ L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQSVKQALEQVVKPEELNGENAYHCGLCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K F++ V IL+LKRF+ + K++ VQ P L+ +M +
Sbjct: 259 QKAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDIQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIYELLPSS 213
L + ++H G S +GHY G ++ D V A ++ V AYV+ Y + S
Sbjct: 319 LYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFY-IQKSE 377
Query: 214 LHHLNSSLH-SSSPGSVEPRTHHR 236
L + S+ PG++ HR
Sbjct: 378 LERCSESVSVGREPGALGAEHKHR 401
>gi|348552570|ref|XP_003462100.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Cavia
porcellus]
Length = 491
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 61/226 (26%), Positives = 101/226 (44%), Gaps = 36/226 (15%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE--------------------GIHRSYLK 57
P +I + + F ED+HEFL+++++ G RS +K
Sbjct: 113 PGRVIQPSRALLADFHRENQEDAHEFLMFIVDAMQKVDLHSENRSLVREIFGGYWRSQIK 172
Query: 58 VIS-GSNN------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQ 110
+ GS + L++ LDI S+ +AL + E L +N Y C C K A+K
Sbjct: 173 CLQCGSTSDTFDPYLDIPLDIKSTRSVKQALARSVQPEELSGENAYHCSICLQKMPASKT 232
Query: 111 FSIEKPPIVFILLLKRFNYLC-LKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHH 163
++ V I+LLKRF+ + KI+ VQ L+ +M + N L + ++H
Sbjct: 233 LTLHTASKVLIILLKRFSDVTGKKIAKHVQYSECLDMQPYMSEQNNKPLLYTLYAVLVHA 292
Query: 164 GSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ--VTNAYVVIY 207
G +S SGHY G ++ D++V A + + +AYV+ Y
Sbjct: 293 GFTSHSGHYFSYVRAGDGHWYKMNDNKVTACDRTSALIQDAYVLFY 338
>gi|291411127|ref|XP_002721844.1| PREDICTED: deubiquitinating enzyme 3-like [Oryctolagus cuniculus]
Length = 530
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLY----------------------------LIE 49
P +I +++A F R ED+HEFL++ ++
Sbjct: 141 PGDVIQPCQVLAAGFHTNRQEDAHEFLMFALDVLKAVGLPGLTDGVGPQEDQSPSQQIVG 200
Query: 50 GIHRSYLKVISGSN-------NLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS ++ + LE++LDI S+++AL E L +N Y C C
Sbjct: 201 GHWRSQIQCLQCQGISETLDPYLEIALDIKTADSVEQALQHLVQPEELAGENAYHCATCL 260
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRRN------ 155
KT A+K +++ V + +LKRF+ + K+ V P L+ +M +
Sbjct: 261 QKTAASKTLTLQSAGKVLLFVLKRFSEFTGEKLGGQVHYPECLDMRPYMSQQNGRPLDYV 320
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
L + ++H G SGHY C +G ++ D +V A + V N AYV+ Y
Sbjct: 321 LYAVLVHVGLRCQSGHYFCYVKAGNGHWYKMDDAKVTACDTTCVLNQSAYVLFY 374
>gi|387019611|gb|AFJ51923.1| Ubiquitin carboxyl-terminal hydrolase 46-like [Crotalus adamanteus]
Length = 366
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 112/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ + +
Sbjct: 88 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTVADILQEEKKQEKQNG 147
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 148 KLKNGNVNEAEENSKQELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 207
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 208 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 267
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G+ ++ R +LV+ V+H GS GHY I S G +
Sbjct: 268 TKLSYRVVFPLELRLFNTSGEAINLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 326
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISKNS 354
>gi|449447371|ref|XP_004141442.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Cucumis
sativus]
Length = 711
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 50/240 (20%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--------------- 62
P II +L I + Y R ED+HEF+ + I+ + + L G
Sbjct: 252 PNNIILRLPNIGGNLGYGRQEDAHEFMRFAIDRMQLACLDEFGGEKAVCAHSRETTIIQH 311
Query: 63 -----------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQC 98
N ++L+++I+ +SL+E L QF E+L DN Y+C
Sbjct: 312 IFGGQLQSQVICTNCNNVSNQHENMMDLTVEIHGDAASLEECLDQFTKIEWLHGDNKYKC 371
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMH---CRR 154
+ C +A+K+ +I++ P + + LKRF K++ V P L+ +M R+
Sbjct: 372 DGCNDYVKASKRLTIKQAPNILTIALKRFQSGRFGKLNKKVAFPETLDLSPYMSEAGDRK 431
Query: 155 N---LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+ L + V+H ++SF GHY C SG+++ D +V +L++V AY+++Y
Sbjct: 432 DVYRLYAVVVHVDMLNASFFGHYICYIKDFSGNWYRIDDCKVFKVDLEEVLSQGAYMILY 491
>gi|449486818|ref|XP_004157412.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Cucumis
sativus]
Length = 711
Score = 73.9 bits (180), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 63/240 (26%), Positives = 110/240 (45%), Gaps = 50/240 (20%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--------------- 62
P II +L I + Y R ED+HEF+ + I+ + + L G
Sbjct: 252 PNNIILRLPNIGGNLGYGRQEDAHEFMRFAIDRMQLACLDEFGGEKAVCAHSRETTIIQH 311
Query: 63 -----------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQC 98
N ++L+++I+ +SL+E L QF E+L DN Y+C
Sbjct: 312 IFGGQLQSQVICTNCNNVSNQHENMMDLTVEIHGDAASLEECLDQFTKIEWLHGDNKYKC 371
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMH---CRR 154
+ C +A+K+ +I++ P + + LKRF K++ V P L+ +M R+
Sbjct: 372 DGCNDYVKASKRLTIKQAPNILTIALKRFQSGRFGKLNKKVAFPETLDLSPYMSEAGDRK 431
Query: 155 N---LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+ L + V+H ++SF GHY C SG+++ D +V +L++V AY+++Y
Sbjct: 432 DVYRLYAVVVHVDMLNASFFGHYICYIKDFSGNWYRIDDCKVFKVDLEEVLSQGAYMILY 491
>gi|71005508|ref|XP_757420.1| hypothetical protein UM01273.1 [Ustilago maydis 521]
gi|46096903|gb|EAK82136.1| hypothetical protein UM01273.1 [Ustilago maydis 521]
Length = 756
Score = 73.6 bits (179), Expect = 6e-11, Method: Composition-based stats.
Identities = 65/230 (28%), Positives = 96/230 (41%), Gaps = 47/230 (20%)
Query: 25 LKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS------------------------ 60
LK A R ED+HE+L +L+E + + L S
Sbjct: 278 LKAFARPLRQGRQEDAHEYLRFLLEALQQGCLSRASKSLKPDDPIRATSFVQKIFGGKLR 337
Query: 61 --------GSNN------LELSLDIYQ-LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKT 105
G N+ ++LSLD+ + ++SL +A F AK+ L Y+C+KC K
Sbjct: 338 SRVTCHKCGHNSDTFDPFMDLSLDVRKGINSLTDAFRAFVAKDQLTGSEKYKCDKCKRKV 397
Query: 106 EATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMH-----CRRNLVSAV 160
+ATKQF+IE P + LKRF+ KIS V L ++ R L + V
Sbjct: 398 DATKQFTIETAPPALTVHLKRFSPFGGKISRQVAFDEKLNIAPYLSVNHGPVRYKLYAVV 457
Query: 161 IHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQ---ASNLQQVTNAYVVIY 207
H+GS SGHY + G + D V +S +AY++ Y
Sbjct: 458 HHYGSGPNSGHYVASVRSPFGKWTRMDDSHVSEMGSSGPLGDQSAYILFY 507
>gi|359324338|ref|XP_540055.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 524
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 57/221 (25%), Positives = 98/221 (44%), Gaps = 45/221 (20%)
Query: 32 FEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN--------------------------- 64
F ++ ED+HE+L+++++ + ++ L S+
Sbjct: 142 FHRHKQEDAHEYLMFILDAMQQACLPEDKLSDPECPQDSTLIQQLFGGYWRSQIQCLHCQ 201
Query: 65 ---------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
L++SLDI S+ +AL Q E L +N Y C KC K A+K ++
Sbjct: 202 GISSTLEPYLDISLDIGDAHSVSQALEQLVKPELLEGENGYHCSKCLEKVPASKVLTLHT 261
Query: 116 PPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSF 168
P V IL+L+RF+ L K++ VQ P L+ ++ +R L + +++ G S
Sbjct: 262 SPKVLILVLRRFSDLTGNKMTKEVQYPERLDMQHYLSEQRAGPLVYVLYAVLVYAGRSCH 321
Query: 169 SGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
SGHY C +G ++ D +V A ++ AYV+ Y
Sbjct: 322 SGHYFCFVKAGNGQWYKMDDAKVSACDVTCALRQPAYVLFY 362
>gi|156373862|ref|XP_001629529.1| predicted protein [Nematostella vectensis]
gi|156216531|gb|EDO37466.1| predicted protein [Nematostella vectensis]
Length = 452
Score = 73.6 bits (179), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 69/268 (25%), Positives = 109/268 (40%), Gaps = 62/268 (23%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---K 57
+RK L A + + PE + + + + F Y+ +D+HEF+ YL++ +H L K
Sbjct: 171 LRKVLCALWQGNCVSHSPEALFSTVWKVVPRFRGYQQQDAHEFMHYLMDRLHTELLLSQK 230
Query: 58 VISGSNN-----------------------------LELSLDI---YQ----------LS 75
G + L+LSL+I +Q
Sbjct: 231 ACFGQDTIVTGIFGGILQSEVTCLTCMTESRKLDPFLDLSLEIPPEFQTRKAKSRENPFC 290
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL--- 132
L++ + F A E L LY C KC K ++TK+F I++ P V L LKRF +
Sbjct: 291 QLEDCMKHFVALEKLAESELYMCLKCKKKEQSTKKFWIQRLPNVLCLHLKRFRFQAFLRS 350
Query: 133 KISCAVQVPLY-----------LEFGKFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSG 181
KI VQ P+ E G+ +L + V+HHGS +GHY + G
Sbjct: 351 KIDTYVQFPIRGLDMSPYTLKGQEKGETKPVLYDLAAVVVHHGSGVSAGHYTTF-AFHDG 409
Query: 182 SYHYFGDDRVQASNLQQVT--NAYVVIY 207
+++ F D V + + V Y+ Y
Sbjct: 410 AWYNFNDSSVSRIDEEMVAKCKGYIFFY 437
>gi|357485233|ref|XP_003612904.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355514239|gb|AES95862.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 715
Score = 73.6 bits (179), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 70/279 (25%), Positives = 118/279 (42%), Gaps = 56/279 (20%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSY----- 55
M+++L + +G I P + ++ LK + F ++ ED+HEF+ ++ + +
Sbjct: 206 MKQSLES----TGRVISPVVFVDNLKQFSSDFRRHQQEDAHEFMQCALDKLETCFSNFEE 261
Query: 56 ----LKVISGS------------------NNLELSLDIYQLSSLDEALGQFFAKEYLVRD 93
KV GS ++LSL+I + S+ AL F E + D
Sbjct: 262 DNIAKKVFGGSLVSKLRCCNCSRSSITNEQLIDLSLEIENVDSISSALESFTMVENI--D 319
Query: 94 NLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF----NYLCLKISCAVQVPLYLEFGKF 149
+CE C + KQ +++ P + LKRF N KI + PL L+ +
Sbjct: 320 AKLKCEGCNEEVSVEKQLMLDQTPSIAAFHLKRFKTVGNNAVEKIDKHINFPLELDLQPY 379
Query: 150 M--------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV-- 199
+ +L + V+H+G+SS SGHY C T+ ++H D V + V
Sbjct: 380 TILNESDNASLKYDLYAVVVHNGTSSDSGHYFCFVRTAPDTWHKLDDSMVTKVSEGTVLS 439
Query: 200 TNAYVVIY---------ELLPSSLHHLNSSLHSSSPGSV 229
AY++ Y S++ LN S ++SP SV
Sbjct: 440 QEAYILFYARQGTPWFSSFAESTIPCLNLSRMNTSPKSV 478
>gi|348505611|ref|XP_003440354.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Oreochromis
niloticus]
Length = 623
Score = 73.2 bits (178), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 77/288 (26%), Positives = 115/288 (39%), Gaps = 83/288 (28%)
Query: 2 RKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLI------------- 48
RKTL + + +A P+ + + I F Y+ +D+HEF+ YL+
Sbjct: 224 RKTLCSLWQGNQTAFSPDSLFYAIWKIMPSFRGYQQQDAHEFMRYLLDHLHRELQYSRNG 283
Query: 49 --------EGIHRSYLK--------------------------VISGSNN------LELS 68
+G+ S +I G+ + L+LS
Sbjct: 284 ASHPLSPQDGVRLSSTDGKCCTNGTASVVTSIFGGILQNEVNCLICGTESRKFDPFLDLS 343
Query: 69 LDI--------------YQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI +L + L F E L LY C KC + ++TK+F I+
Sbjct: 344 LDIPSQFRQKRNKDQEPVPTCTLRDCLHSFTDLEELDDTELYYCHKCKKRQKSTKKFWIQ 403
Query: 115 KPPIVFILLLKRFNYLCL---KISCAVQVPL--------YLEFGKFM--HCRRNLVSAVI 161
K P V L LKRF++ K+ V+ PL LE K + C +LV+ V+
Sbjct: 404 KLPKVLCLHLKRFHWTAFLRNKVDTYVEFPLKGLDMRGYLLEPEKSLPGSCLYDLVAVVV 463
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY GS G +++F D V +N V AY++ Y
Sbjct: 464 HHGSGVGSGHYTAYGS-HEGRWYHFNDSTVTLTNEDTVRKAKAYILFY 510
>gi|302142049|emb|CBI19252.3| unnamed protein product [Vitis vinifera]
Length = 841
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 49/246 (19%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV--ISGSNNLE-- 66
E S + P I+++++ I H + ED+HEFL Y I+ + LK ++ S +LE
Sbjct: 528 EGNSPLSPLGILSQIRNIGSHLGNGKEEDAHEFLRYAIDAMQSVCLKEAGVNASGSLEEE 587
Query: 67 ---------------------------------LSLDIY-QLSSLDEALGQFFAKEYLVR 92
L+++I + +L+EAL +F + E L
Sbjct: 588 TSLIGLTFGGYLRSKIKCMKCHGKSERHERMMDLTVEIEGDIGTLEEALHKFTSTEILDG 647
Query: 93 DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMH 151
+N YQC +C +A K+ ++ + P + + LKRF K++ +++ P L+ FM
Sbjct: 648 ENKYQCSRCKSYEKAKKKLTVSEAPNILTIALKRFQSGKFGKLNKSIRFPEILDLAPFMS 707
Query: 152 CRRN------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TN 201
+ L + V+H +++FSGHY C + D V+ L++V
Sbjct: 708 GTSDKSPIYRLYAVVVHLDIMNAAFSGHYVCYVKNIQNKWFKIDDSTVKPVELERVLTKG 767
Query: 202 AYVVIY 207
AY+++Y
Sbjct: 768 AYMLLY 773
>gi|357140850|ref|XP_003571975.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like
[Brachypodium distachyon]
Length = 971
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 67/252 (26%), Positives = 110/252 (43%), Gaps = 50/252 (19%)
Query: 6 AACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--- 62
A+ ESG + P I++ L+ I ED+HEFL +L+ + + L + G
Sbjct: 487 ASTLRESGGPVSPSRILSNLRNIGCRLGGGSQEDAHEFLRHLVMSMQAACLDGLGGEKHV 546
Query: 63 -----------------------------------NNLELSLDIY-QLSSLDEALGQFFA 86
N ++L+L+I+ + SL +AL QF A
Sbjct: 547 EPSLQETTLIQQMFGGRLKSKVKCLRCLHESERYENIMDLTLEIHGWVESLQDALTQFTA 606
Query: 87 KEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLE 145
E L +N+Y+C +C +A KQ S+ + P + ++LKRF KI+ V P L+
Sbjct: 607 PEDLDGENMYKCGRCCAYVKARKQLSVHEVPNILTVVLKRFQTGKYGKINKCVTFPEMLD 666
Query: 146 FGKFMHCRRN------LVSAVIHHGS--SSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQ 197
F+ + L + V+H + +SFSGHY G++ D V+A +
Sbjct: 667 MVPFVTGAGDHPPLYFLYAVVVHVDTENASFSGHYISYVKDMQGTWLRIDDSEVKAVSPN 726
Query: 198 QVTN--AYVVIY 207
QV + AY++ Y
Sbjct: 727 QVMSEGAYMLFY 738
>gi|9279587|dbj|BAB01045.1| unnamed protein product [Arabidopsis thaliana]
Length = 632
Score = 73.2 bits (178), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 78/172 (45%), Gaps = 39/172 (22%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK-------------------- 57
P I + LK+ A HF+ R ED+HEFL Y+I+ H + L+
Sbjct: 95 PNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLRYNGNEPFNGNSVVKE 154
Query: 58 VISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCE 99
+ G SN +++SL+I Q SS+ E+L +FF E L +N Y+CE
Sbjct: 155 IFGGALQSQVKCLSCGAESNKADEIMDISLEILQSSSVKESLQKFFQSEILDGNNKYRCE 214
Query: 100 KCGYKTEATKQFSIEKPPIVFILLLKRFNYL-CLKISCAVQVPLYLEFGKFM 150
C A KQ SI + P + ++ LKRF + KI A+ L FM
Sbjct: 215 SCEKLVTARKQMSILQAPNILVIQLKRFGGIFGGKIDKAISFGEILVLSNFM 266
>gi|402913327|ref|XP_003919158.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 392
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL+++++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFIVDAMKKACLPGHKQVDHDSEDTTLIHQIFG 198
Query: 50 GIHRSYLKVI--SGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K + G ++ L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQSVKQALEQVVKPEELNGENAYHCGLCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K F++ V IL+LKRF+ + K++ VQ P L+ +M +
Sbjct: 259 QKAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDIQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V A ++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFY 372
>gi|66361578|ref|XP_627322.1| ubiquitin carboxyl-terminal hydrolase of the cysteine proteinase
fold [Cryptosporidium parvum Iowa II]
gi|46228703|gb|EAK89573.1| ubiquitin carboxyl-terminal hydrolase of the cysteine proteinase
fold [Cryptosporidium parvum Iowa II]
Length = 765
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/273 (23%), Positives = 107/273 (39%), Gaps = 66/273 (24%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV-- 58
M + ++ ++ I KLI F D+ EFL Y +E +H+S L
Sbjct: 168 MLDNTSKSNTKNDQPVVSSFIKCAQKLIWKRFRIGMMHDAQEFLRYFLEALHKSCLPKNL 227
Query: 59 -----------ISGSNN-----------------------------LELSLDIYQLSSLD 78
I+ S +++ LDI +S+L+
Sbjct: 228 QTDQTFRKIHPIAASTTYIGQLFCGFFLSRIVCHNCQYTSNTYDPFMDVPLDIMGVSNLE 287
Query: 79 EALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL---CLKIS 135
AL F EYL +N Y C KC +++A+KQ IEK P + + LKRF+Y+ K +
Sbjct: 288 NALKLFTKIEYLKGENRYMCPKCNQRSDASKQLLIEKLPPLLTIQLKRFSYVGHGSRKPN 347
Query: 136 CAVQVPLYLEFGKFMHCRR-----------------NLVSAVIHHGSSSFSGHYNCIGST 178
A+ L+ +M + L + V H G++ GHY +
Sbjct: 348 KAINFSDVLDLQPYMSSKTYSESKVSSSKSESSYIYKLWAVVCHSGNTLSCGHYYTHAKS 407
Query: 179 SSGSYHYFGDDRVQASNLQQVTN----AYVVIY 207
++ F DD V+ + ++ V N AY++ Y
Sbjct: 408 IDNKWYCFNDDYVKPTRIENVLNENHKAYLLFY 440
>gi|402912282|ref|XP_003918703.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
gi|402912555|ref|XP_003918822.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 73.2 bits (178), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL+++++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFIVDAMKKACLPGHKQVDHDSEDTTLIHQIFG 198
Query: 50 GIHRSYLKVI--SGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K + G ++ L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQSVKQALEQVVKPEELNGENAYHCGLCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K F++ V IL+LKRF+ + K++ VQ P L+ +M +
Sbjct: 259 QKAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDIQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V A ++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFY 372
>gi|359495665|ref|XP_003635052.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Vitis
vinifera]
Length = 942
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/244 (25%), Positives = 104/244 (42%), Gaps = 47/244 (19%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK------------- 57
E S + P I+++++ I H + R ED+HEFL Y ++ + LK
Sbjct: 454 EGKSPLSPMGILSQIQRIGSHLGHGREEDAHEFLRYAVDTMQSVCLKDTGVVGPLAEDTT 513
Query: 58 ----VISG--------------SNNLELSLDIY-----QLSSLDEALGQFFAKEYLVRDN 94
G S E +D+ + +L+EAL QF A E L +N
Sbjct: 514 LVGLTFGGYLLSKIKCMKCQGKSERCERMMDLTVEIDGDIGTLEEALAQFTATEILDGEN 573
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCR 153
YQC +C +A K+ + + P + ++LKRF K++ +V+ P L +M
Sbjct: 574 KYQCGRCRSYEKAKKKLMVLEAPNILTIVLKRFQSSNFGKLNKSVRFPETLNLTPYMSGT 633
Query: 154 RN------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAY 203
+ L + V+H +++FSGHY C G + D V L +V AY
Sbjct: 634 DDRYPVYSLYAVVVHLDIMNAAFSGHYVCFVKNFLGDWFRIDDSTVTPVELDRVLLEGAY 693
Query: 204 VVIY 207
+++Y
Sbjct: 694 MLLY 697
>gi|345806352|ref|XP_851787.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Canis lupus familiaris]
Length = 535
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/221 (25%), Positives = 97/221 (43%), Gaps = 45/221 (20%)
Query: 32 FEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN--------------------------- 64
F ++ ED+HE+L+++++ + ++ L S+
Sbjct: 153 FHRHKQEDAHEYLMFILDAMQQACLPEDKLSDPECPQDSTLIQQLFGGYWRSQIQCLHCQ 212
Query: 65 ---------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
L++SLDI S+ +AL Q E L +N Y C KC K A+K ++
Sbjct: 213 GISSTLEPYLDISLDIGAAHSVSQALEQLVKPELLEGENAYHCSKCLEKVPASKVLTLHT 272
Query: 116 PPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSF 168
P V IL+L+RF+ L K++ V+ P L+ + +R L + ++H G S
Sbjct: 273 SPKVLILVLRRFSDLTGNKMTKEVRYPERLDMQHCLSEQRAGLLVYVLYAVLVHAGRSCH 332
Query: 169 SGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
SGHY C +G ++ D +V A ++ AY++ Y
Sbjct: 333 SGHYFCFVKAGNGQWYKMDDAKVSACDVTCALHQPAYILFY 373
>gi|225459111|ref|XP_002283885.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Vitis
vinifera]
Length = 1213
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 49/246 (19%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV--ISGSNNLE-- 66
E S + P I+++++ I H + ED+HEFL Y I+ + LK ++ S +LE
Sbjct: 706 EGNSPLSPLGILSQIRNIGSHLGNGKEEDAHEFLRYAIDAMQSVCLKEAGVNASGSLEEE 765
Query: 67 ---------------------------------LSLDIY-QLSSLDEALGQFFAKEYLVR 92
L+++I + +L+EAL +F + E L
Sbjct: 766 TSLIGLTFGGYLRSKIKCMKCHGKSERHERMMDLTVEIEGDIGTLEEALHKFTSTEILDG 825
Query: 93 DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMH 151
+N YQC +C +A K+ ++ + P + + LKRF K++ +++ P L+ FM
Sbjct: 826 ENKYQCSRCKSYEKAKKKLTVSEAPNILTIALKRFQSGKFGKLNKSIRFPEILDLAPFMS 885
Query: 152 CRRN------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TN 201
+ L + V+H +++FSGHY C + D V+ L++V
Sbjct: 886 GTSDKSPIYRLYAVVVHLDIMNAAFSGHYVCYVKNIQNKWFKIDDSTVKPVELERVLTKG 945
Query: 202 AYVVIY 207
AY+++Y
Sbjct: 946 AYMLLY 951
>gi|159469257|ref|XP_001692784.1| predicted protein [Chlamydomonas reinhardtii]
gi|158278037|gb|EDP03803.1| predicted protein [Chlamydomonas reinhardtii]
Length = 263
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/220 (28%), Positives = 90/220 (40%), Gaps = 50/220 (22%)
Query: 38 EDSHEFLLYLIEGIHRSYLKVISGSNN--------------------------------- 64
EDSHEFL L++ +H + L+ +
Sbjct: 42 EDSHEFLRCLLDAMHEACLRRFRPAKPPPELAATTFVYRIFGGRLKSQIECDGVDYVSRT 101
Query: 65 ----LELSLDIYQLSSLDEALGQFFAKEYLVRDNL---YQCEKCGYKTEATKQFSIEKPP 117
L+LSL+I + +SL+ AL F A E L +C C ATK+ SIE P
Sbjct: 102 FDPFLDLSLEINRAASLERALAAFTAAEVLTAPTTSHGRRCGSCASWVRATKRISIEDAP 161
Query: 118 IVFILLLKRFNY--LCLKISCAVQVPLYLEFGKFMHCRR------NLVSAVIHHGSSSFS 169
V + LKRF Y KI+ V L +M + +L ++HHG S S
Sbjct: 162 NVLTVHLKRFEYGGFGAKINKHVAFGTELNLRPYMSATKGPALMYDLYGVLVHHGYSVNS 221
Query: 170 GHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
GHY C ++G +H D RV A + V + AY++ Y
Sbjct: 222 GHYICYVKAANGLWHVCDDHRVAAVGERTVLDQRAYILFY 261
>gi|327281244|ref|XP_003225359.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Anolis
carolinensis]
Length = 366
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/268 (26%), Positives = 111/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ + +
Sbjct: 88 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTVADILQEEKKQEKQNG 147
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
++ +G+ N L+LS+D+ Q +S
Sbjct: 148 RLRNGNMNETEENNKQDLTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 207
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 208 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 267
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G ++ R +LV+ V+H GS GHY I S G +
Sbjct: 268 TKLSYRVVFPLELRLFNTSGDAINLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 326
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISKNS 354
>gi|402912765|ref|XP_003918915.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 400
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 102/234 (43%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL+++++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFIVDAMKKACLPGHKQVDHDSEDTTLIHQIFG 198
Query: 50 GIHRSYLKVI--SGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K + G ++ L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQSVKQALEQVVKPEELNGENAYHCGLCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K F++ V IL+LKRF+ + K++ VQ P L+ +M +
Sbjct: 259 QKAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDVQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V A ++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFY 372
>gi|147776521|emb|CAN74012.1| hypothetical protein VITISV_003549 [Vitis vinifera]
Length = 1225
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 110/246 (44%), Gaps = 49/246 (19%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV--ISGSNNLE-- 66
E S + P I+++++ I H + ED+HEFL Y I+ + LK ++ S +LE
Sbjct: 718 EGNSPLSPLGILSQIRNIGSHLGNGKEEDAHEFLRYAIDAMQSVCLKEAGVNASGSLEEE 777
Query: 67 ---------------------------------LSLDIY-QLSSLDEALGQFFAKEYLVR 92
L+++I + +L+EAL +F + E L
Sbjct: 778 TSLIGLTFGGYLRSKIKCMKCHGKSERHERMMDLTVEIEGDIGTLEEALHKFTSTEILDG 837
Query: 93 DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMH 151
+N YQC +C +A K+ ++ + P + + LKRF K++ +++ P L+ FM
Sbjct: 838 ENKYQCSRCKSYEKAKKKLTVSEAPNILTIALKRFQSGKFGKLNKSIRFPEILDLAPFMS 897
Query: 152 CRRN------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TN 201
+ L + V+H +++FSGHY C + D V+ L++V
Sbjct: 898 GTSDKSPIYRLYAVVVHLDIMNAAFSGHYVCYVKNIQNKWFKIDDSTVKPVELERVLTKG 957
Query: 202 AYVVIY 207
AY+++Y
Sbjct: 958 AYMLLY 963
>gi|449453974|ref|XP_004144731.1| PREDICTED: uncharacterized protein LOC101219654 [Cucumis sativus]
Length = 933
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 72/255 (28%), Positives = 116/255 (45%), Gaps = 48/255 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
++K ++ SG + P+ +++ L+ I+ +F R ED+HE+++ L+E +H+ L
Sbjct: 149 IQKHVSRALQSSGRILAPKDLVSNLRCISRNFRNARQEDAHEYMVNLLESMHKCCLPLGL 208
Query: 57 --------------KVISG--------------SNN----LELSLDIYQLSSLDEALGQF 84
K+ G SN L+LSLDI + S+ +A F
Sbjct: 209 PSESPSAYEKSLVHKIFGGRLRSQVKCMQCSFCSNKFDPFLDLSLDIVKADSIYKAFKNF 268
Query: 85 FAKEYLV-RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL--KISCAVQVP 141
E L + YQC++C K +A KQF++ K P V + LKRF L KI +
Sbjct: 269 TTPELLDGGERQYQCQQCKQKVKALKQFTVHKAPYVLTIHLKRFQSYNLEEKIHKKIHFG 328
Query: 142 LYLEFGKFM-------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQAS 194
L+ F+ + L ++HHG S+ SGHY C TSS ++ D+RV
Sbjct: 329 PTLDLAPFVSGSYADGDLKYTLYGVLVHHGGSTRSGHYYCYVRTSSAMWYALDDNRVSHV 388
Query: 195 NLQQV--TNAYVVIY 207
+ V AY++ Y
Sbjct: 389 GDRTVYEQQAYMLFY 403
>gi|427788575|gb|JAA59739.1| Putative ubiquitin carboxyl-terminal hydrolase [Rhipicephalus
pulchellus]
Length = 996
Score = 72.8 bits (177), Expect = 1e-10, Method: Composition-based stats.
Identities = 60/184 (32%), Positives = 85/184 (46%), Gaps = 23/184 (12%)
Query: 66 ELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLK 125
EL L+I L L+EAL QF +E L N Y C CG A + + + P V L L
Sbjct: 252 ELDLNIKGLRHLEEALNQFLREEKLEGSNQYSCGVCGGMRNAVRCIRLRRLPPVLNLQLL 311
Query: 126 RFNYL----CLKISCAVQVPLYLEFGKFMHCRR-------NLVSAVIHHGSSSFSGHYNC 174
RF + C KI+ A+Q L+ H R+ L++ +IH GSS+ SGHY
Sbjct: 312 RFGFDRQAGCRKINTALQFTETLDLSA--HLRKPPGSMVYTLMAVLIHQGSSANSGHYVA 369
Query: 175 -IGSTSSGSYHYFGDD---RVQASNLQQVTNAYVVIYELLPSSLHHLNSSLHSSSPGSVE 230
I +SGS++ F DD +++ +LQ T+ E P+ S S P +
Sbjct: 370 HIKDRTSGSWYLFNDDGVCKMRGRHLQLNTD------EENPTRAQSTGSDDASEPPKRLA 423
Query: 231 PRTH 234
TH
Sbjct: 424 KGTH 427
>gi|325190752|emb|CCA25244.1| ubiquitinspecific protease putative [Albugo laibachii Nc14]
Length = 699
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 111/263 (42%), Gaps = 48/263 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVI---SGSNNL--------- 65
P + ++L++ HF R ED+HEF L++ I +S L+ S S+ L
Sbjct: 183 PRDFVMNVRLLSKHFRIGRQEDAHEFFRSLLDSIQKSSLQAARFASDSDPLASTTMIPRI 242
Query: 66 -------------------------ELSLDIYQ-LSSLDEALGQFFAKEYLVRDNLYQCE 99
+LSL+I+ + ++ EA+ F A E L N ++C
Sbjct: 243 FGGKLKSSLKCVKCSYVSEHLEDFQDLSLEIHNGIQTITEAIDHFTAVEKLDETNAWKCT 302
Query: 100 KCGYKTEATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRR---- 154
KC A K +I + P V ++ LKRF+ +L K+ + PL L +
Sbjct: 303 KCRLFNRAEKGLTIAEYPNVLVIQLKRFDGFLGGKLKKHISFPLELALPNTCKSKSQNRT 362
Query: 155 --NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY-EL 209
L + ++H G S+ GHY SS ++ DD V+ + V AY++ Y +
Sbjct: 363 KYTLYAILVHAGHSTDCGHYYAFVKGSSRQWYEMNDDSVRWVSADTVLSQRAYMLFYSRV 422
Query: 210 LPSSLHHLNSSLHSSSPGSVEPR 232
+ +S+ + G+V+ R
Sbjct: 423 IDKDTKPATTSISNVKEGAVQQR 445
>gi|242083438|ref|XP_002442144.1| hypothetical protein SORBIDRAFT_08g014950 [Sorghum bicolor]
gi|241942837|gb|EES15982.1| hypothetical protein SORBIDRAFT_08g014950 [Sorghum bicolor]
Length = 315
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 74/145 (51%), Gaps = 11/145 (7%)
Query: 66 ELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLK 125
EL L+I L++L+E+L +F++E L +N Y CE C + +AT+ + P V LK
Sbjct: 162 ELELNIKGLNTLEESLNDYFSEEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLK 221
Query: 126 RFNYLC-----LKISCAVQVPLYLEFGKFM-----HCRRNLVSAVIHHGSSSFSGHYNC- 174
R+ +L KIS P L+ GK + C +L + ++H G+ + SGHY
Sbjct: 222 RYVFLPKTTTKKKISSTFSFPRQLDLGKRLSNPSSSCTYDLAAILVHKGTGANSGHYVAH 281
Query: 175 IGSTSSGSYHYFGDDRVQASNLQQV 199
I S+G + F D+ V +Q V
Sbjct: 282 IKDESNGQWWEFDDETVSKLGVQPV 306
>gi|242210465|ref|XP_002471075.1| predicted protein [Postia placenta Mad-698-R]
gi|220729865|gb|EED83732.1| predicted protein [Postia placenta Mad-698-R]
Length = 269
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 67/228 (29%), Positives = 96/228 (42%), Gaps = 46/228 (20%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------------------ 51
AE GS + P I+KLK + F +D+HEFL +L+ I
Sbjct: 18 AERGS-VAPRAFIDKLKELNELFRGSMHQDAHEFLNFLLNKIVEEMEDDRRLGYPVQATI 76
Query: 52 -HRSYLKVISGSNN--------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLY 96
HR + V++ L+LS+DI Q SS+ L QF A E L + N +
Sbjct: 77 VHRLFEGVLTSETRCLTCETVSSRDESFLDLSIDIEQNSSVTACLRQFSASEMLCQKNKF 136
Query: 97 QCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQVPLYLEFGKFMH 151
C+ C EA K+ I+K P + L LKRF Y +K++ V P L +
Sbjct: 137 FCDSCCDLQEAEKRMKIKKLPNILALHLKRFKYQEDVGKYIKLAYRVAFPFQLRLFNTVD 196
Query: 152 CRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
N L + V+H G+ GHY I + G++ F DD V
Sbjct: 197 DAENPDRLYELFAIVVHIGNGPHHGHYVTI-IKARGTWLLFDDDSVDT 243
>gi|255545936|ref|XP_002514028.1| conserved hypothetical protein [Ricinus communis]
gi|223547114|gb|EEF48611.1| conserved hypothetical protein [Ricinus communis]
Length = 1060
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 114/267 (42%), Gaps = 52/267 (19%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNL----- 65
E S + P I+++L+ IA R ED+HEFL Y I+ + LK +G N L
Sbjct: 580 EGKSPLSPIGILSQLQNIASQLGTGREEDAHEFLRYAIDTMQSVCLKE-AGVNALGSFEE 638
Query: 66 ---------------------------------ELSLDIY-QLSSLDEALGQFFAKEYLV 91
+L+++I + L++AL +F E L
Sbjct: 639 ETTLIGLTFGGYLRSKIKCMKCHYKSERHERMMDLTVEIEGDIEKLEDALRRFTGTEILD 698
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFM 150
DN YQC +C +A K+ +I + P V + LKRF K++ +++ P L+ +M
Sbjct: 699 GDNKYQCGRCKSYEKAKKKLTILEAPNVLTIALKRFQSGKFGKLNKSIRFPEILDLAPYM 758
Query: 151 HCRRN------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--T 200
+ L V+H ++SFSGHY C + D V A L++V
Sbjct: 759 SGTSDKSPIYRLYGVVVHLDIMNASFSGHYVCYVKNVQNKWFKIDDSTVTAVELERVLTK 818
Query: 201 NAYVVIY-ELLPSSLHHLNSSLHSSSP 226
AY+++Y P + + + + SS P
Sbjct: 819 GAYMLLYARCSPRAPRLIRNRIASSDP 845
>gi|114598756|ref|XP_001139436.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Pan
troglodytes]
Length = 530
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 102/235 (43%), Gaps = 44/235 (18%)
Query: 17 IPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE--------------------------- 49
IP +I + +A F + ED+HEFL++ ++
Sbjct: 138 IPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMEKACLPGHKQVEHHSKDTTLIHQIF 197
Query: 50 -GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKC 101
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 198 GGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGLC 257
Query: 102 GYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN----- 155
+ A+K ++ V IL+LKRF+ + K++ VQ P L+ +M +
Sbjct: 258 LQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLVY 317
Query: 156 -LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 318 VLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>gi|297735922|emb|CBI18698.3| unnamed protein product [Vitis vinifera]
Length = 669
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 103/244 (42%), Gaps = 47/244 (19%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS---------- 60
E S + P I+++++ I H + R ED+HEFL Y ++ + LK
Sbjct: 424 EGKSPLSPMGILSQIQRIGSHLGHGREEDAHEFLRYAVDTMQSVCLKDTGVVGPLAEDTT 483
Query: 61 ---------------------GSNNLELSLDIY-----QLSSLDEALGQFFAKEYLVRDN 94
S E +D+ + +L+EAL QF A E L +N
Sbjct: 484 LVGLTFGGYLLSKIKCMKCQGKSERCERMMDLTVEIDGDIGTLEEALAQFTATEILDGEN 543
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCR 153
YQC +C +A K+ + + P + ++LKRF K++ +V+ P L +M
Sbjct: 544 KYQCGRCRSYEKAKKKLMVLEAPNILTIVLKRFQSSNFGKLNKSVRFPETLNLTPYMSGT 603
Query: 154 RN------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAY 203
+ L + V+H +++FSGHY C G + D V L +V AY
Sbjct: 604 DDRYPVYSLYAVVVHLDIMNAAFSGHYVCFVKNFLGDWFRIDDSTVTPVELDRVLLEGAY 663
Query: 204 VVIY 207
+++Y
Sbjct: 664 MLLY 667
>gi|403335477|gb|EJY66914.1| Ubiquitin carboxyl-terminal hydrolase [Oxytricha trifallax]
Length = 783
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 108/263 (41%), Gaps = 72/263 (27%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEG---------------IHR-----SYLK 57
P+LI+++LK I + + + ED+HEFL+ +E IH+ LK
Sbjct: 164 PQLIVSRLKTIWNRYRVGQQEDAHEFLILFLESFINSCFQTARPPRDIIHKHQYKTPILK 223
Query: 58 VISG--------------SNNLE----LSLDIY--------QLSSLDEALGQFFAKEYLV 91
+ G SN E LSLD+ + + L +F E+L
Sbjct: 224 IFGGKSRSQVHCLGCNYKSNTFEDLITLSLDLPFGARGKPPGPMTFESCLNRFCTSEHLK 283
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKF-- 149
+N YQC C K EATK+FSI+K P + I+ KRF+ K+ ++ P +F
Sbjct: 284 GENKYQCSNCKKKCEATKRFSIDKTPRILIIHFKRFDAFGRKVPTFIKYPQSFSLKEFTS 343
Query: 150 ----------------MHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFG 187
+ +N L V+H G SGHY S+G+++
Sbjct: 344 QSIDAKHDPKIRQELQTNTDKNSQELYDLFGVVVHMGGGCRSGHYYSYCKNSTGNWYECD 403
Query: 188 DDRVQASNLQQV--TNAYVVIYE 208
D + S+ +Q AYV+ Y+
Sbjct: 404 DSSISTSSTEQALKQQAYVLFYQ 426
>gi|47226065|emb|CAG04439.1| unnamed protein product [Tetraodon nigroviridis]
Length = 269
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 51/153 (33%), Positives = 76/153 (49%), Gaps = 11/153 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L + L+I +S + AL QF E L + Y C C A K +I + V L+L
Sbjct: 116 LNILLEIKTVSDVSTALEQFVRPEILGGPDAYSCSSCKKMVTAIKSLTIHRSTNVLTLVL 175
Query: 125 KRFNYLCL--KISCAVQVPLYLEFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIG 176
KRF+ +C KI+ V+ P YL+ FM + L + ++H+G SS SGHY C
Sbjct: 176 KRFD-ICAGEKINKDVRYPEYLDLYPFMSETQEKPLVYRLYAVLVHYGRSSHSGHYFCYI 234
Query: 177 STSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
S G ++ D+ V +++Q V AYV+ Y
Sbjct: 235 KASDGQWYRMNDNSVIITDIQSVLAKQAYVLFY 267
>gi|242006825|ref|XP_002424245.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
gi|212507614|gb|EEB11507.1| ubiquitin carboxyl-terminal hydrolase, putative [Pediculus humanus
corporis]
Length = 344
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 68/263 (25%), Positives = 108/263 (41%), Gaps = 57/263 (21%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH-------------- 52
A Q + +I P+ I +L+ F+ Y +D+HEF +L+ I+
Sbjct: 68 ATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFFNFLVNHINEIILAERHQITSNK 127
Query: 53 ------------------------------RSYLKVISGSNNL-ELSLDIYQLSSLDEAL 81
+ +L V S + +L +DI Q +S+ L
Sbjct: 128 SNSKGTSINIITNNSGDSGSTEPTWVHEIFKEFLPVSSKDEDFFDLQVDIDQNTSITHCL 187
Query: 82 GQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----LKISC 136
F E L DN ++C+ C EA K+ ++K P++ L LKRF Y+ +K+S
Sbjct: 188 KCFSNTETLCGDNKFKCDNCSSYQEAQKRMRVKKLPMILALHLKRFKYMEQYNRHIKVSH 247
Query: 137 AVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDR 190
V PL L ++ R +LV+ VIH GS GHY I S G + F DD
Sbjct: 248 RVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISI-VKSHGFWLLFDDDM 306
Query: 191 VQASNLQQVTNAYVVIYELLPSS 213
V + + + Y + ++ SS
Sbjct: 307 VDKIDASTIEDFYGLTSDIQKSS 329
>gi|452824642|gb|EME31643.1| ubiquitin carboxyl-terminal hydrolase 36/42 [Galdieria sulphuraria]
Length = 605
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 61/231 (26%), Positives = 98/231 (42%), Gaps = 49/231 (21%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--------------- 62
P ++ LK+++ +F R D+HE++ +L++ ++R L + G
Sbjct: 165 PVDLVRNLKVLSRNFTPGRQADAHEYIRFLLDDMNRILLGIPRGKLCHDRQQEMHTLVHE 224
Query: 63 ------------NN-----------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCE 99
N L++SLD+ +S+L +AL F E L N Y C
Sbjct: 225 IFGGCYESKVSCQNCGSSSDTVEPFLDVSLDLEGVSTLAKALKGFTTPERLFGPNRYFCS 284
Query: 100 KCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMHCRRN---- 155
+C +T+A+K F + P VFI LKRF L K + V +F F+ + N
Sbjct: 285 QCKQRTDASKVFQFRRIPNVFIFHLKRFR-LSKKENKFVSYDETFDFSPFIPLKGNSIRK 343
Query: 156 -----LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN 201
L + ++H G S GHY S+G + Y DD + +QQ N
Sbjct: 344 PVYYRLCAVIVHEGFSIHGGHYYAYVRNSNGIW-YLKDDECTSRVVQQKVN 393
>gi|432920839|ref|XP_004080002.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Oryzias
latipes]
Length = 367
Score = 72.4 bits (176), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 69/255 (27%), Positives = 109/255 (42%), Gaps = 59/255 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLI------------------ 48
A Q + I P+ I++L+ F+ Y +D+HEFL YL+
Sbjct: 92 ATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNTXXXXXXXXXXGGGGGG 151
Query: 49 ----------EGIHRSYL-KVISGS------------------NNLELSLDIYQLSSLDE 79
+ I ++++ ++ G+ + L+LS+D+ Q +S+
Sbjct: 152 GGGGGGGGGGKEIQQTWVHEIFQGTLTNETRCLNCEAVSSKDEDFLDLSVDVEQNTSITH 211
Query: 80 ALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----LKI 134
L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+ K+
Sbjct: 212 CLRGFSNTETLCSECKYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFKYMDQLHRYTKL 271
Query: 135 SCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGD 188
S V PL L G + R +LV+ V+H GS GHY I S G + F D
Sbjct: 272 SYRVVFPLELRLFNTSGDATNPERMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLLFDD 330
Query: 189 DRVQASNLQQVTNAY 203
D V+ + Q + Y
Sbjct: 331 DIVEKIDAQAIEEFY 345
>gi|350535651|ref|NP_001232206.1| putative ubiquitin specific protease 12 [Taeniopygia guttata]
gi|197127197|gb|ACH43695.1| putative ubiquitin specific protease 12 [Taeniopygia guttata]
Length = 344
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/252 (28%), Positives = 104/252 (41%), Gaps = 61/252 (24%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 92 ATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEEKKQEKQNG 151
Query: 57 KVISGS---------------------------------------NNLELSLDIYQLSSL 77
K+ +GS + L+LS+D+ Q +S+
Sbjct: 152 KLQNGSIESEEGDKPDLTWVHEIFQGTLTNETRCLNCEAVSSKDEDFLDLSVDVEQNTSI 211
Query: 78 DEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----L 132
L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 212 THCLRGFSNTETLCSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFKYMDQLHRYT 271
Query: 133 KISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYF 186
K+S V PL L G + R +LV+ V+H GS GHY I S G + F
Sbjct: 272 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLLF 330
Query: 187 GDDRVQASNLQQ 198
DD V+ QQ
Sbjct: 331 DDDIVEVGKEQQ 342
>gi|358422719|ref|XP_001252302.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 759
Score = 72.4 bits (176), Expect = 2e-10, Method: Composition-based stats.
Identities = 66/252 (26%), Positives = 108/252 (42%), Gaps = 51/252 (20%)
Query: 4 TLAACQAESGSAIIP--ELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISG 61
TL A +A A++ E+I + L+A F ++ ED+HEFL++ + + + L
Sbjct: 136 TLCAMRAHVTRALLHAGEVIRPREDLLAG-FHRHQKEDAHEFLMFTLNAVQQGCLSASQP 194
Query: 62 SNN-----------------------------------LELSLDIYQLSSLDEALGQFFA 86
S + L++SLDI S+++AL +
Sbjct: 195 SGHASEDTTVIRQIFGGTWRSQIQCLRCLSVSDTFDPYLDISLDITAAQSVEQALRELVK 254
Query: 87 KEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-LKISCAVQVPLYLE 145
E L DN Y C C K ATK+ ++ V +L+LKRF + K + V+ P L+
Sbjct: 255 PEKLDADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTLVSGAKRAQEVRYPQCLD 314
Query: 146 FGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN---- 195
+ R+ L + ++H G S GHY C +G ++ D +V A +
Sbjct: 315 LQPYTSERKAGPLGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAA 374
Query: 196 LQQVTNAYVVIY 207
L Q +AYV+ Y
Sbjct: 375 LSQ--SAYVLFY 384
>gi|444520452|gb|ELV13004.1| Ubiquitin carboxyl-terminal hydrolase 17-like protein 2 [Tupaia
chinensis]
Length = 442
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 65/234 (27%), Positives = 101/234 (43%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P II +A F ED+HEFL++ +E
Sbjct: 55 PGSIIQPSYALAASFHRNEQEDAHEFLMFTLEAMQEASLSGQKHFDHPSEDSTLIRAIFG 114
Query: 50 GIHRSYLKVI---SGSNN----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K + S S+ L++SLDI S+ +AL + E L +N Y C C
Sbjct: 115 GYWRSQIKCLHCHSVSDTFDPYLDISLDIKTAQSVSQALEELVKPEELDGENAYHCSVCL 174
Query: 103 YKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRR------N 155
+ A+K ++ V IL+LKRF ++ K + AVQ P L+ + +
Sbjct: 175 ERRLASKTLTLHASSKVLILVLKRFSDFTGEKTTKAVQYPECLDMQTYTSEQNRGPLIYG 234
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
L + ++H GSS +GHY C +G ++ D V A ++ V + AYV+ Y
Sbjct: 235 LYAVLVHAGSSCHNGHYFCYIKAGNGQWYKMDDAEVTACDVTVVLSQPAYVLFY 288
>gi|313234636|emb|CBY10591.1| unnamed protein product [Oikopleura dioica]
Length = 482
Score = 72.4 bits (176), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/247 (27%), Positives = 109/247 (44%), Gaps = 65/247 (26%)
Query: 25 LKLIAHHFEY---YRPEDSHEFLLYLIEGIH-RSYLKVISGSNNL--------------- 65
L L+ + EY Y +D+HEFL+ +++ IH R ++ GS +L
Sbjct: 230 LLLVWRNSEYLAGYEQQDAHEFLIAVLDMIHERLQPRIEGGSIDLTGHAERSIIDQVFTG 289
Query: 66 ----------------------ELSLDIYQL--SSLDEALGQFFAKEYLVRDNLYQCEKC 101
++SLDI Q+ +SL + L +F KE L + C+KC
Sbjct: 290 YMQSNVVCNQCGNISQTIDPLRDISLDIPQVPSASLMDCLSKFTKKEQLGNASKINCKKC 349
Query: 102 GYKTEATKQFSIEKPPIVFILLLKRFNYLCL----KISCAVQVPLYLEFGKFMHCRRNL- 156
G + E++KQ +I + P+V L LKRF K++ V P L+ G FM RN
Sbjct: 350 GKRQESSKQLTISRLPVVACLHLKRFEQTATGSRSKVATPVSFPKTLDMGPFMSSARNTS 409
Query: 157 --------------VSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN- 201
+ AV++H + SGHY +S S+ D + ++++QV N
Sbjct: 410 LSPEFCDSAHYKYELFAVVNHMGNLQSGHYTSFIRQTS-SWFRCDDSLITKASIEQVLNS 468
Query: 202 -AYVVIY 207
AY++ Y
Sbjct: 469 EAYLLFY 475
>gi|449490903|ref|XP_004158744.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 23-like [Cucumis sativus]
Length = 898
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/254 (28%), Positives = 115/254 (45%), Gaps = 47/254 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
++K ++ SG + P+ +++ L+ I+ +F R ED+HE+++ L+E +H+ L
Sbjct: 149 IQKHVSRALQSSGRILAPKDLVSNLRCISRNFRNARQEDAHEYMVNLLESMHKCCLPLGL 208
Query: 57 --------------KVISG--------------SNN----LELSLDIYQLSSLDEALGQF 84
K+ G SN L+LSLDI + S+ +A F
Sbjct: 209 PSESPSAYEKSLVHKIFGGRLRSQVKCMQCSXCSNKFDPFLDLSLDIVKADSIYKAFKNF 268
Query: 85 FAKEYLVRD-NLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL--KISCAVQVP 141
E L YQC++C K +A KQF++ K P V + LKRF L KI +
Sbjct: 269 TTPELLDGGXRQYQCQQCKQKVKALKQFTVHKAPYVLTIHLKRFQSYNLEEKIHKKIHFG 328
Query: 142 LYLEFGKFM------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
L+ F+ + L ++HHG S+ SGHY C TSS ++ D+RV
Sbjct: 329 PTLDLAPFVSGSYDGDLKYTLYGVLVHHGGSTRSGHYYCYVRTSSAMWYALDDNRVSHVG 388
Query: 196 LQQV--TNAYVVIY 207
+ V AY++ Y
Sbjct: 389 DRTVYEQQAYMLFY 402
>gi|196005903|ref|XP_002112818.1| hypothetical protein TRIADDRAFT_50293 [Trichoplax adhaerens]
gi|190584859|gb|EDV24928.1| hypothetical protein TRIADDRAFT_50293 [Trichoplax adhaerens]
Length = 327
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/240 (28%), Positives = 100/240 (41%), Gaps = 36/240 (15%)
Query: 9 QAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYLKV 58
Q I P+ I KL+ F+ Y +D+HEFL YL+ I H + +
Sbjct: 77 QRRKIGVIAPKKFIAKLRKENDLFDNYMQQDAHEFLNYLLNTIADILQAATWVHEIFEGI 136
Query: 59 ISGSNN--------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYK 104
+ L+LS+D+ + +S+ L F + E L D Y CE+C K
Sbjct: 137 LVNETRCLCCESVSCKDESFLDLSVDVEENTSITSCLKGFSSTETLRSDQKYYCEQCCGK 196
Query: 105 TEATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN---- 155
EA K+ ++K P L LKRF Y+ K+S V PL ++ + N
Sbjct: 197 QEAEKRMRVKKLPKTLALHLKRFKYVEDLHRYTKLSYRVVFPLEIKLFNMSNDATNPDQM 256
Query: 156 --LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
L + V+H GS GHY I S G + F DD V+ + + Y + E SS
Sbjct: 257 YDLFAVVVHCGSGPNRGHYISI-VKSHGFWLLFDDDAVEKIEPNAMEDFYGLASETYKSS 315
>gi|357485235|ref|XP_003612905.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355514240|gb|AES95863.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 739
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 60/245 (24%), Positives = 106/245 (43%), Gaps = 45/245 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+++L + +G I P + ++ LK + F ++ ED+HEF+ ++ + +
Sbjct: 206 MKQSLES----TGRVISPVVFVDNLKQFSSDFRRHQQEDAHEFMQCALDKLETCFSNFEE 261
Query: 57 -----KVISGS------------------NNLELSLDIYQLSSLDEALGQFFAKEYLVRD 93
KV GS ++LSL+I + S+ AL F E + D
Sbjct: 262 DNIAKKVFGGSLVSKLRCCNCSRSSITNEQLIDLSLEIENVDSISSALESFTMVENI--D 319
Query: 94 NLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF----NYLCLKISCAVQVPLYLEFGKF 149
+CE C + KQ +++ P + LKRF N KI + PL L+ +
Sbjct: 320 AKLKCEGCNEEVSVEKQLMLDQTPSIAAFHLKRFKTVGNNAVEKIDKHINFPLELDLQPY 379
Query: 150 M--------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN 201
+ +L + V+H+G+SS SGHY C T+ ++H D V ++ L +
Sbjct: 380 TILNESDNASLKYDLYAVVVHNGTSSDSGHYFCFVRTAPDTWHKLDDSMVASAILVPLGR 439
Query: 202 AYVVI 206
+V+
Sbjct: 440 DLIVL 444
>gi|334331351|ref|XP_001371592.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Monodelphis domestica]
Length = 379
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 101 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 160
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 161 KLKNGNMNEPVENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 220
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 221 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 280
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 281 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 339
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 340 FDDDIVEKIDAQAIEEFYGLTSDISKNS 367
>gi|10434108|dbj|BAB14133.1| unnamed protein product [Homo sapiens]
Length = 366
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 88 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 147
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 148 KLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 207
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P+V L LKRF Y+
Sbjct: 208 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMVLALHLKRFKYMEQLRRY 267
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 268 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 326
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISKNS 354
>gi|33333160|gb|AAQ11741.1| deubiquitinating enzyme DUB1 [Homo sapiens]
Length = 530
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M +
Sbjct: 259 QRASASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>gi|387019715|gb|AFJ51975.1| Ubiquitin specific peptidase 46 [Crotalus adamanteus]
Length = 369
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 111/267 (41%), Gaps = 61/267 (22%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 92 ATQKKKVGVIPPKRFISRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEEKKQEKQNG 151
Query: 57 KVISGS---------------------------------------NNLELSLDIYQLSSL 77
K+ +GS + L+LS+D+ Q +S+
Sbjct: 152 KLQNGSIESDEGEKAELTWVHEIFQGALTNETRCLNCEAVSSKDEDFLDLSVDVEQNTSI 211
Query: 78 DEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----L 132
L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 212 THCLRGFSNTETLCSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFKYMDQLHRYT 271
Query: 133 KISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYF 186
K+S V PL L G + R +LV+ V+H GS GHY I S G + F
Sbjct: 272 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLLF 330
Query: 187 GDDRVQASNLQQVTNAYVVIYELLPSS 213
DD V+ + Q + Y + ++ +S
Sbjct: 331 DDDIVEKIDAQAIEEFYGLTSDISKNS 357
>gi|332819099|ref|XP_001175011.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17 [Pan
troglodytes]
Length = 354
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/235 (26%), Positives = 102/235 (43%), Gaps = 44/235 (18%)
Query: 17 IPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE--------------------------- 49
IP +I + +A F + ED+HEFL++ ++
Sbjct: 31 IPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMEKACLPGHKQVEHHSKDTTLIHQIF 90
Query: 50 -GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKC 101
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 91 GGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGLC 150
Query: 102 GYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN----- 155
+ A+K ++ V IL+LKRF+ + K++ VQ P L+ +M +
Sbjct: 151 LQRAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLVY 210
Query: 156 -LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 211 VLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSVTSVLSQQAYVLFY 265
>gi|189236253|ref|XP_974193.2| PREDICTED: similar to conserved hypothetical protein [Tribolium
castaneum]
Length = 354
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/269 (26%), Positives = 109/269 (40%), Gaps = 63/269 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---KVISGSN 63
A Q + +I P+ I +L+ F+ Y +D+HEFL +LI I L + S +N
Sbjct: 73 ATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHISEIILAERQQNSTTN 132
Query: 64 NL------------------------------------------------ELSLDIYQLS 75
N+ +L +DI Q +
Sbjct: 133 NIKSKATGENGTAHTTPEPTWVHEIFQGILTSETRCLNCENVSSKDEDFFDLQVDIEQNT 192
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC---- 131
S+ L F E L DN ++C+ C EA K+ ++K P++ L LKRF Y+
Sbjct: 193 SITHCLRCFSNTETLCSDNKFKCDNCSSYQEAQKRMRVKKLPMILALHLKRFKYMEQYNR 252
Query: 132 -LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
+K+S V PL L ++ R +LV+ VIH GS GHY I S G +
Sbjct: 253 HIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISI-VKSHGFWL 311
Query: 185 YFGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD+V + + + Y + + SS
Sbjct: 312 LFDDDQVDKIDASTIEDFYGLTSDTQKSS 340
>gi|444727772|gb|ELW68250.1| Ubiquitin carboxyl-terminal hydrolase 36 [Tupaia chinensis]
Length = 2413
Score = 72.0 bits (175), Expect = 2e-10, Method: Composition-based stats.
Identities = 54/178 (30%), Positives = 83/178 (46%), Gaps = 37/178 (20%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 417 MQNHITQAFANSGNAIKPVSFIRDLKKIARHFRFGSQEDAHEFLRYTIDAMQKACLNGCA 476
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 477 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANIVRALELFV 536
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPL 142
+ L +N Y C +C K A+K+F+I + V L LKRF N+ KI+ V VP+
Sbjct: 537 KPDVLSGENAYMCARCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKIT-KVSVPI 593
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 47/137 (34%), Positives = 68/137 (49%), Gaps = 11/137 (8%)
Query: 101 CGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMH------CR 153
C K A+K+F+I + V L LKRF N+ KI+ V P +L +M
Sbjct: 619 CKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFLNIRPYMSQSSGEPVM 678
Query: 154 RNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIYELLP 211
L + ++H G S +GHY C SSG ++ D V +SN++ V N AYV+ Y +P
Sbjct: 679 YGLYAVLVHSGYSCHAGHYYCYVKASSGQWYQMNDSLVHSSNVKVVLNQQAYVLFYLRIP 738
Query: 212 SSLHHLNSSLHSSSPGS 228
S S++ S PGS
Sbjct: 739 GSRKSSESAV--SRPGS 753
>gi|379030610|ref|NP_001243792.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 22 [Homo
sapiens]
gi|449061962|sp|D6RA61.1|U17LM_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
22
Length = 530
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M +
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>gi|395843772|ref|XP_003794647.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2
[Otolemur garnettii]
Length = 354
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 76 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 135
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 136 KLKNGNMNETAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 195
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 196 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 255
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 256 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 314
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 315 FDDDIVEKIDAQAIEEFYGLTSDISKNS 342
>gi|221042968|dbj|BAH13161.1| unnamed protein product [Homo sapiens]
Length = 354
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 76 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 135
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 136 KLKNGNMNEPAENNKPELTWVHEIFQGTLANETRCLNCETVSSKDEDFLDLSVDVEQNTS 195
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 196 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 255
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 256 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 314
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 315 FDDDIVEKIDAQAIEEFYGLTSDISKNS 342
>gi|340708658|ref|XP_003392939.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Bombus
terrestris]
Length = 354
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 108/264 (40%), Gaps = 58/264 (21%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH------RSYLKVIS 60
A Q + +I P+ I +L+ F+ Y +D+HEFL +LI I+ RS K
Sbjct: 78 ATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERSQSKPTG 137
Query: 61 GS----------------------------------------NNLELSLDIYQLSSLDEA 80
G + +L +D+ Q +S+
Sbjct: 138 GKCGAGDAGSPPEPTWVHEIFQGILTSETRCLNCETVSSKDEDFFDLQVDVDQNTSITHC 197
Query: 81 LGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----LKIS 135
L F E L DN ++C+ C EA K+ ++K P++ L LKRF Y+ +K+S
Sbjct: 198 LRCFSNTETLCSDNKFKCDHCSSYQEAQKRMRVKKLPMILALHLKRFKYVEQYNRHIKVS 257
Query: 136 CAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDD 189
V PL L ++ R +LV+ VIH GS GHY I S G + F DD
Sbjct: 258 HRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISI-VKSHGFWLLFDDD 316
Query: 190 RVQASNLQQVTNAYVVIYELLPSS 213
V + + + Y + ++ SS
Sbjct: 317 MVDKIDASTIEDFYGLTSDIQKSS 340
>gi|224126461|ref|XP_002329560.1| predicted protein [Populus trichocarpa]
gi|222870269|gb|EEF07400.1| predicted protein [Populus trichocarpa]
Length = 809
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 103/248 (41%), Gaps = 50/248 (20%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV-----ISGSNN 64
A SG + P ++N L I+ F Y+ ED+HEFL L+E + RS L IS S +
Sbjct: 320 ASSGKILEPLKLVNNLDSISSFFRRYQQEDAHEFLQCLLERLERSCLDSSLTDDISSSQD 379
Query: 65 -------------------------------LELSLDIYQLSSLDEALGQFFAKEYLVR- 92
++LSL+I +L AL F E +
Sbjct: 380 KNIVERVFGGRLVSKLRCCNCGHFSDKYEPLIDLSLEIEDADTLQIALESFTNVEKIEDS 439
Query: 93 DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL---KISCAVQVPLYLEFGKF 149
+ + CE C + KQ ++K P + L LKRF KI V+ PL L+ +
Sbjct: 440 ETKFTCENCKEEVSREKQLMLDKAPSIAALHLKRFKIDGTSVEKIGKHVEFPLELDLKPY 499
Query: 150 MHC--------RRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN 201
++ + L + V+H G S SGHY C +S ++H D V + V +
Sbjct: 500 INDNDSNDVGFKYQLYAVVVHKGYSLTSGHYVCYIRSSPDTWHKLDDPEVSKEREEFVLS 559
Query: 202 --AYVVIY 207
AY++ Y
Sbjct: 560 QAAYILFY 567
>gi|270005509|gb|EFA01957.1| hypothetical protein TcasGA2_TC007573 [Tribolium castaneum]
Length = 366
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/269 (26%), Positives = 109/269 (40%), Gaps = 63/269 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLI------------------ 48
A Q + +I P+ I +L+ F+ Y +D+HEFL +LI
Sbjct: 85 ATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHISEIILAERQQNSTTN 144
Query: 49 --------------------------EGIHRSYLKVISGSNN-------LELSLDIYQLS 75
+GI S + ++ N +L +DI Q +
Sbjct: 145 NIKSKATGENGTAHTTPEPTWVHEIFQGILTSETRCLNCENVSSKDEDFFDLQVDIEQNT 204
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC---- 131
S+ L F E L DN ++C+ C EA K+ ++K P++ L LKRF Y+
Sbjct: 205 SITHCLRCFSNTETLCSDNKFKCDNCSSYQEAQKRMRVKKLPMILALHLKRFKYMEQYNR 264
Query: 132 -LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
+K+S V PL L ++ R +LV+ VIH GS GHY I S G +
Sbjct: 265 HIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISI-VKSHGFWL 323
Query: 185 YFGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD+V + + + Y + + SS
Sbjct: 324 LFDDDQVDKIDASTIEDFYGLTSDTQKSS 352
>gi|326924494|ref|XP_003208462.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Meleagris
gallopavo]
Length = 414
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/267 (26%), Positives = 111/267 (41%), Gaps = 61/267 (22%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 137 ATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEEKKQEKQNG 196
Query: 57 KVISGS---------------------------------------NNLELSLDIYQLSSL 77
K+ +GS + L+LS+D+ Q +S+
Sbjct: 197 KLQNGSIESEEGDKTDLTWVHEIFQGTLTNETRCLNCEAVSSKDEDFLDLSVDVEQNTSI 256
Query: 78 DEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----L 132
L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 257 THCLRGFSNTETLCSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFKYMDQLHRYT 316
Query: 133 KISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYF 186
K+S V PL L G + R +LV+ V+H GS GHY I S G + F
Sbjct: 317 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLLF 375
Query: 187 GDDRVQASNLQQVTNAYVVIYELLPSS 213
DD V+ + Q + Y + ++ +S
Sbjct: 376 DDDIVEKIDAQAIEEFYGLTSDISKNS 402
>gi|187663985|sp|Q6QN14.2|U17L6_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
6; AltName: Full=Deubiquitinating enzyme 17-like protein
6; AltName: Full=Ubiquitin thioesterase 17-like protein
6; AltName: Full=Ubiquitin-specific-processing protease
17-like protein 6
Length = 398
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M +
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>gi|301756861|ref|XP_002914278.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Ailuropoda
melanoleuca]
gi|281347308|gb|EFB22892.1| hypothetical protein PANDA_002153 [Ailuropoda melanoleuca]
Length = 520
Score = 72.0 bits (175), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 116/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 222 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 281
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 282 GVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 341
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C +C K ++TK+F I+
Sbjct: 342 LDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHRCKKKQKSTKKFWIQ 401
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E HC +L + V+
Sbjct: 402 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPEHCLYDLAAVVV 461
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY + G + +F D V ++ V AY++ Y
Sbjct: 462 HHGSGVGSGHYTAYAA-HEGRWFHFNDSTVTLTDEDTVVKAKAYILFY 508
>gi|350413154|ref|XP_003489897.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Bombus
impatiens]
Length = 369
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 108/264 (40%), Gaps = 58/264 (21%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH------RSYLKVIS 60
A Q + +I P+ I +L+ F+ Y +D+HEFL +LI I+ RS K
Sbjct: 93 ATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERSQSKPTG 152
Query: 61 GS----------------------------------------NNLELSLDIYQLSSLDEA 80
G + +L +D+ Q +S+
Sbjct: 153 GKCGAGDAGSPPEPTWVHEIFQGILTSETRCLNCETVSSKDEDFFDLQVDVDQNTSITHC 212
Query: 81 LGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----LKIS 135
L F E L DN ++C+ C EA K+ ++K P++ L LKRF Y+ +K+S
Sbjct: 213 LRCFSNTETLCSDNKFKCDHCSSYQEAQKRMRVKKLPMILALHLKRFKYVEQYNRHIKVS 272
Query: 136 CAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDD 189
V PL L ++ R +LV+ VIH GS GHY I S G + F DD
Sbjct: 273 HRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISI-VKSHGFWLLFDDD 331
Query: 190 RVQASNLQQVTNAYVVIYELLPSS 213
V + + + Y + ++ SS
Sbjct: 332 MVDKIDASTIEDFYGLTSDIQKSS 355
>gi|426232189|ref|XP_004010116.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Ovis aries]
Length = 384
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 106 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 165
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 166 KLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 225
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 226 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 285
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 286 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 344
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 345 FDDDIVEKIDAQAIEEFYGLTSDISKNS 372
>gi|33333162|gb|AAQ11742.1| deubiquitinating enzyme DUB2 [Homo sapiens]
Length = 530
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M +
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITPVLTQQAYVLFY 372
>gi|45386059|gb|AAS59847.1| deubiquitinating enzyme DUB4 [Homo sapiens]
Length = 398
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M +
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLTQQAYVLFY 372
>gi|299470395|emb|CBN80156.1| conserved unknown protein [Ectocarpus siliculosus]
Length = 782
Score = 71.6 bits (174), Expect = 2e-10, Method: Composition-based stats.
Identities = 69/261 (26%), Positives = 106/261 (40%), Gaps = 66/261 (25%)
Query: 9 QAESGSA----IIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL-------- 56
Q +SGSA I P + L+ I F R ED+HEFL +L++ + SYL
Sbjct: 206 QTKSGSAEQQAIRPRTFSDNLRKIGEKFRRGRQEDAHEFLRHLVDKMAGSYLERRGVDPF 265
Query: 57 ------------KVISG--------------SNN----LELSLDIYQLSS---------L 77
+V G S+ ++L++++ ++ S L
Sbjct: 266 APNRLAETTPIHRVFGGYLRSQLKCSECGFCSDTFDPFMDLAMNVEKVDSSGVAMNERSL 325
Query: 78 DEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCA 137
AL +F A E L N ++C C EA K S+ KPP + LKRF + +
Sbjct: 326 QAALRRFTAPETLGAGNEWKCGGCNKLVEAEKNLSVFKPPNALVFQLKRFGF----TNGP 381
Query: 138 VQVPLYLEFGKFMH---------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGD 188
+V ++ FG ++ +L V+H G + SGHY +S+GS+ D
Sbjct: 382 RKVKDHISFGDKLNLEVSGPERWANYDLTGVVVHSGKTMSSGHYYAYVRSSAGSWARMND 441
Query: 189 DRVQASNLQQV--TNAYVVIY 207
V L V AYV+ Y
Sbjct: 442 SVVTKVTLDTVLRDKAYVLFY 462
>gi|194209163|ref|XP_001917117.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Equus
caballus]
Length = 360
Score = 71.6 bits (174), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 82 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 141
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 142 KLKNGNMNETAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 201
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 202 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 261
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 262 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 320
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 321 FDDDIVEKIDAQAIEEFYGLTSDISKNS 348
>gi|395542774|ref|XP_003773300.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Sarcophilus
harrisii]
Length = 373
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 105/258 (40%), Gaps = 62/258 (24%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 95 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 154
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 155 KLKNGNMNEPVENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 214
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 215 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 274
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 275 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 333
Query: 186 FGDDRVQASNLQQVTNAY 203
F DD V+ + Q + Y
Sbjct: 334 FDDDIVEKIDAQAIEEFY 351
>gi|207079973|ref|NP_001128936.1| DKFZP469E158 protein [Pongo abelii]
gi|55728156|emb|CAH90828.1| hypothetical protein [Pongo abelii]
Length = 339
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 61 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 120
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 121 KLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 180
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 181 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 240
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 241 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 299
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 300 FDDDIVEKIDAQAIEEFYGLTSDISKNS 327
>gi|149035244|gb|EDL89948.1| similar to ubiquitin specific protease 46 (predicted) [Rattus
norvegicus]
Length = 347
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 69 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 128
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 129 KLKNGNMNEPAENSKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 188
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 189 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 248
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 249 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 307
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 308 FDDDIVEKIDAQAIEEFYGLTSDISKNS 335
>gi|327289850|ref|XP_003229637.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Anolis
carolinensis]
Length = 479
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 111/270 (41%), Gaps = 64/270 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 199 ATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEEKKQEKQNG 258
Query: 57 KVISGS------------------------------------------NNLELSLDIYQL 74
K+ +GS + L+LS+D+ Q
Sbjct: 259 KLQNGSLESSGGDEGEKGDLTWVHEIFQGTLTNETRCLNCEAVSSKDEDFLDLSVDVEQN 318
Query: 75 SSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC--- 131
+S+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 319 TSITHCLRGFSNTETLCSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFKYMDQLH 378
Query: 132 --LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSY 183
K+S V PL L G + R +LV+ V+H GS GHY I S G +
Sbjct: 379 RYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFW 437
Query: 184 HYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 438 LLFDDDIVEKIDAQAIEEFYGLTSDISKNS 467
>gi|281352654|gb|EFB28238.1| hypothetical protein PANDA_008082 [Ailuropoda melanoleuca]
gi|351697652|gb|EHB00571.1| Ubiquitin carboxyl-terminal hydrolase 46, partial [Heterocephalus
glaber]
Length = 354
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 76 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 135
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 136 KLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 195
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 196 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 255
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 256 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 314
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 315 FDDDIVEKIDAQAIEEFYGLTSDISKNS 342
>gi|332244521|ref|XP_003271421.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Nomascus leucogenys]
Length = 529
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGDVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMRKACLPGHKQVDPHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKVI--SGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K + G ++ L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCQGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K ++ V IL+LKRF+ + K++ VQ P L+ +M +
Sbjct: 259 QKAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS + V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFY 372
>gi|432111639|gb|ELK34741.1| Ubiquitin carboxyl-terminal hydrolase 46 [Myotis davidii]
Length = 370
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 92 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 151
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 152 KLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 211
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 212 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 271
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 272 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 330
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 331 FDDDIVEKIDAQAIEEFYGLTSDISKNS 358
>gi|354501689|ref|XP_003512921.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Cricetulus griseus]
Length = 459
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 181 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 240
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 241 KLKNGNMNEPAESNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 300
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 301 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 360
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 361 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 419
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 420 FDDDIVEKIDAQAIEEFYGLTSDISKNS 447
>gi|29243896|ref|NP_808229.1| ubiquitin carboxyl-terminal hydrolase 46 [Mus musculus]
gi|31377709|ref|NP_073743.2| ubiquitin carboxyl-terminal hydrolase 46 isoform 1 [Homo sapiens]
gi|197097492|ref|NP_001127337.1| ubiquitin carboxyl-terminal hydrolase 46 [Pongo abelii]
gi|329112531|ref|NP_001179373.2| ubiquitin carboxyl-terminal hydrolase 46 [Bos taurus]
gi|388454621|ref|NP_001253892.1| ubiquitin carboxyl-terminal hydrolase 46 [Macaca mulatta]
gi|114594803|ref|XP_517296.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2 [Pan
troglodytes]
gi|332238466|ref|XP_003268419.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1
[Nomascus leucogenys]
gi|402869825|ref|XP_003898946.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1
[Papio anubis]
gi|426344309|ref|XP_004038716.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1
[Gorilla gorilla gorilla]
gi|49065850|sp|P62068.1|UBP46_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 46; AltName:
Full=Deubiquitinating enzyme 46; AltName: Full=Ubiquitin
thioesterase 46; AltName:
Full=Ubiquitin-specific-processing protease 46
gi|49065851|sp|P62069.1|UBP46_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 46; AltName:
Full=Deubiquitinating enzyme 46; AltName: Full=Ubiquitin
thioesterase 46; AltName:
Full=Ubiquitin-specific-processing protease 46
gi|75055084|sp|Q5RBQ4.1|UBP46_PONAB RecName: Full=Ubiquitin carboxyl-terminal hydrolase 46; AltName:
Full=Deubiquitinating enzyme 46; AltName: Full=Ubiquitin
thioesterase 46; AltName:
Full=Ubiquitin-specific-processing protease 46
gi|10436670|dbj|BAB14881.1| unnamed protein product [Homo sapiens]
gi|22902225|gb|AAH37574.1| Ubiquitin specific peptidase 46 [Homo sapiens]
gi|25059082|gb|AAH39916.1| Ubiquitin specific peptidase 46 [Mus musculus]
gi|55728112|emb|CAH90806.1| hypothetical protein [Pongo abelii]
gi|74208300|dbj|BAE26353.1| unnamed protein product [Mus musculus]
gi|119625840|gb|EAX05435.1| ubiquitin specific peptidase 46, isoform CRA_b [Homo sapiens]
gi|124000509|gb|ABM87763.1| ubiquitin specific peptidase 46 [synthetic construct]
gi|157928604|gb|ABW03598.1| ubiquitin specific peptidase 46 [synthetic construct]
gi|319433467|gb|ADV57651.1| ubiquitin specific protease 46 [Homo sapiens]
gi|380783867|gb|AFE63809.1| ubiquitin carboxyl-terminal hydrolase 46 isoform 1 [Macaca mulatta]
gi|384943090|gb|AFI35150.1| ubiquitin carboxyl-terminal hydrolase 46 isoform 1 [Macaca mulatta]
gi|410210120|gb|JAA02279.1| ubiquitin specific peptidase 46 [Pan troglodytes]
gi|410254346|gb|JAA15140.1| ubiquitin specific peptidase 46 [Pan troglodytes]
gi|410289942|gb|JAA23571.1| ubiquitin specific peptidase 46 [Pan troglodytes]
gi|410342789|gb|JAA40341.1| ubiquitin specific peptidase 46 [Pan troglodytes]
gi|417399762|gb|JAA46868.1| Putative ubiquitin carboxyl-terminal hydrolase 46 [Desmodus
rotundus]
Length = 366
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 88 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 147
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 148 KLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 207
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 208 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 267
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 268 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 326
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISKNS 354
>gi|410957766|ref|XP_003985495.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Felis catus]
Length = 369
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 91 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 150
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 151 KLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 210
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 211 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 270
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 271 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 329
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 330 FDDDIVEKIDAQAIEEFYGLTSDISKNS 357
>gi|402912436|ref|XP_003918772.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL+++++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFIVDAMKKACLPGHKQVDHDSEDTTLIHQIFG 198
Query: 50 GIHRSYLKVI--SGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K + G ++ L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQSVKQALEQVMKPEELNGENAYHCGLCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K F++ V IL+LKRF+ + K++ VQ P L+ +M +
Sbjct: 259 QKAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G +GHY G ++ D V A ++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWCCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFY 372
>gi|291411119|ref|XP_002721840.1| PREDICTED: ubiquitin specific peptidase 46 [Oryctolagus cuniculus]
Length = 360
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 82 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 141
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 142 KLKNGNMNEPAENNKAELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 201
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 202 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 261
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 262 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 320
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 321 FDDDIVEKIDAQAIEEFYGLTSDISKNS 348
>gi|300797766|ref|NP_001178525.1| ubiquitin carboxyl-terminal hydrolase 46 [Rattus norvegicus]
gi|319433465|gb|ADV57650.1| ubiquitin specific protease 46 [Rattus norvegicus]
Length = 366
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 88 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 147
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 148 KLKNGNMNEPAENSKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 207
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 208 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 267
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 268 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 326
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISKNS 354
>gi|125556320|gb|EAZ01926.1| hypothetical protein OsI_23952 [Oryza sativa Indica Group]
Length = 1079
Score = 71.6 bits (174), Expect = 3e-10, Method: Composition-based stats.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 49/247 (19%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS------- 62
+ES P+ I++ L I + + R ED+HEF+ + I+ + + L G
Sbjct: 272 SESMHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACLDEFGGEKAVDPST 331
Query: 63 -------------------------------NNLELSLDIY-QLSSLDEALGQFFAKEYL 90
N ++L+++I+ SL+E L +F A E+L
Sbjct: 332 QETTLIQHIFGGRLQSQVQCTACGMVSNRYENMMDLTVEIHGDADSLEECLDKFTAVEWL 391
Query: 91 VRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKF 149
DN Y+C+ C +A K+ ++ + P + + LKRF K++ V P+ L+ +
Sbjct: 392 DGDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRFQSGRFGKLNKRVTFPMKLDLTPY 451
Query: 150 MHC-----RRNLVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--T 200
M + +L + V+H ++SF GHY C G ++ D +V A + ++V
Sbjct: 452 MSSTDGSDQYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVDEEEVHAQ 511
Query: 201 NAYVVIY 207
AY+++Y
Sbjct: 512 GAYMLLY 518
>gi|348571693|ref|XP_003471630.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Cavia
porcellus]
Length = 409
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 131 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 190
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 191 KLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 250
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 251 ITHCLRDFSNTETLCSEQKYYCEMCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 310
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 311 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 369
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 370 FDDDIVEKIDAQAIEEFYGLTSDISKNS 397
>gi|344288367|ref|XP_003415922.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Loxodonta
africana]
Length = 359
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 81 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 140
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 141 KLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 200
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 201 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 260
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 261 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 319
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 320 FDDDIVEKIDAQAIEEFYGLTSDISKNS 347
>gi|148705919|gb|EDL37866.1| ubiquitin specific peptidase 46, isoform CRA_b [Mus musculus]
Length = 359
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 81 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 140
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 141 KLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 200
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 201 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 260
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 261 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 319
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 320 FDDDIVEKIDAQAIEEFYGLTSDISKNS 347
>gi|332019434|gb|EGI59918.1| Ubiquitin carboxyl-terminal hydrolase 46 [Acromyrmex echinatior]
Length = 470
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 108/265 (40%), Gaps = 59/265 (22%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH------RSYLKVIS 60
A Q + +I P+ I +L+ F+ Y +D+HEFL +LI I+ R+ K
Sbjct: 193 ATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERTQSKPTG 252
Query: 61 GS-----------------------------------------NNLELSLDIYQLSSLDE 79
G + +L +D+ Q +S+
Sbjct: 253 GKCGAGDAAGSPPEPTWVHEIFQGILTSETRCLNCETVSSKDEDFFDLQVDVDQNTSITH 312
Query: 80 ALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----LKI 134
L F E L DN ++C+ C EA K+ ++K P++ L LKRF Y+ +K+
Sbjct: 313 CLRCFSNTETLCSDNKFKCDHCSSYQEAQKRMRVKKLPMILALHLKRFKYVEQYNRHIKV 372
Query: 135 SCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGD 188
S V PL L ++ R +LV+ VIH GS GHY I S G + F D
Sbjct: 373 SHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISI-VKSHGFWLLFDD 431
Query: 189 DRVQASNLQQVTNAYVVIYELLPSS 213
D V + + + Y + ++ SS
Sbjct: 432 DMVDKIDASTIEDFYGLTSDIQKSS 456
>gi|66530407|ref|XP_625039.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Apis
mellifera]
gi|380023380|ref|XP_003695501.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Apis
florea]
Length = 354
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 70/264 (26%), Positives = 108/264 (40%), Gaps = 58/264 (21%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH------RSYLKVIS 60
A Q + +I P+ I +L+ F+ Y +D+HEFL +LI I+ RS K
Sbjct: 78 ATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERSQSKPAG 137
Query: 61 GS----------------------------------------NNLELSLDIYQLSSLDEA 80
G + +L +D+ Q +S+
Sbjct: 138 GKCGAGDAGSPPEPTWVHEIFQGILTSETRCLNCETVSSKDEDFFDLQVDVDQNTSITHC 197
Query: 81 LGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----LKIS 135
L F E L DN ++C+ C EA K+ ++K P++ L LKRF Y+ +K+S
Sbjct: 198 LRCFSNTETLCSDNKFKCDHCSSYQEAQKRMRVKKLPMILALHLKRFKYVEQYNRHIKVS 257
Query: 136 CAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDD 189
V PL L ++ R +LV+ VIH GS GHY I S G + F DD
Sbjct: 258 HRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISI-VKSHGFWLLFDDD 316
Query: 190 RVQASNLQQVTNAYVVIYELLPSS 213
V + + + Y + ++ SS
Sbjct: 317 MVDKIDASTIEDFYGLTSDIQKSS 340
>gi|356546765|ref|XP_003541793.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Glycine
max]
Length = 990
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 105/247 (42%), Gaps = 50/247 (20%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS-------- 62
E+G + P I+ ++ I H ED+HEFL LI + L+ + G
Sbjct: 528 ENGDPLSPSRILWHMRSINCHMGEGNQEDAHEFLRLLIASMQSICLEALGGEKKVDPRLQ 587
Query: 63 ------------------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLV 91
N ++L+L+I + SL++AL QF + E L
Sbjct: 588 ETTFIQHTFGGRLQSKVKCLKCNHESERYENIMDLTLEILGWVESLEDALTQFTSPEDLD 647
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFM 150
+N+Y+C +C A KQ SI + P + ++LKRF KI+ + P L+ FM
Sbjct: 648 GENMYRCGRCTSYVRARKQLSIHEAPNILTIVLKRFQEGRYGKINKCITFPEMLDMIPFM 707
Query: 151 HCRRN------LVSAVIHHGS--SSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN- 201
+ L + V+H + +SFSGHY G++ D VQ + QV +
Sbjct: 708 TGTGDIPPLYMLYAVVVHLDTLNASFSGHYVSYVKDLQGNWFRIDDIEVQPVLVNQVMSE 767
Query: 202 -AYVVIY 207
AY++ Y
Sbjct: 768 GAYILFY 774
>gi|296486535|tpg|DAA28648.1| TPA: ubiquitin specific peptidase 46-like [Bos taurus]
Length = 382
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 104 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 163
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 164 KLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 223
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 224 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 283
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 284 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 342
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 343 FDDDIVEKIDAQAIEEFYGLTSDISKNS 370
>gi|390460899|ref|XP_002745872.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Callithrix
jacchus]
Length = 359
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 81 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 140
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 141 KLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 200
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 201 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 260
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 261 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 319
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 320 FDDDIVEKIDAQAIEEFYGLTSDISKNS 347
>gi|395843770|ref|XP_003794646.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1
[Otolemur garnettii]
Length = 366
Score = 71.6 bits (174), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 88 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 147
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 148 KLKNGNMNETAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 207
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 208 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 267
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 268 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 326
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISKNS 354
>gi|356556906|ref|XP_003546761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 15-like [Glycine
max]
Length = 989
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 66/247 (26%), Positives = 106/247 (42%), Gaps = 50/247 (20%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS-------- 62
E+G+ + P I+ ++ I H ED+HEFL LI + L+ + G
Sbjct: 526 ENGAPLSPSRILWHMRSINCHMGEGSQEDAHEFLRLLIASMQSICLEGLGGEKKVDPRIQ 585
Query: 63 ------------------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLV 91
N ++L+L+I + SL++AL QF + E L
Sbjct: 586 ETTFIQHTFGGRLQSKVKCLNCNHESERYENIMDLTLEILGWVESLEDALTQFTSPEDLD 645
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFM 150
+N+Y+C +C A KQ SI + P + ++LKRF KI+ + P L+ FM
Sbjct: 646 GENMYRCGRCTSYVRARKQLSIHEAPNILTIVLKRFQEGRYGKINKCITFPEMLDMIPFM 705
Query: 151 HCRRN------LVSAVIHHGS--SSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN- 201
+ L + V+H + +SFSGHY G++ D VQ + QV +
Sbjct: 706 TGTGDIPPLYMLYAVVVHLDTLNASFSGHYVSYVKDLQGNWFRIDDAEVQPVLINQVMSE 765
Query: 202 -AYVVIY 207
AY++ Y
Sbjct: 766 GAYILFY 772
>gi|197116355|ref|NP_001127695.1| ubiquitin carboxyl-terminal hydrolase 46 isoform 2 [Homo sapiens]
gi|114594805|ref|XP_001148401.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 1 [Pan
troglodytes]
gi|301768068|ref|XP_002919453.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Ailuropoda melanoleuca]
gi|332238468|ref|XP_003268420.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2
[Nomascus leucogenys]
gi|397469742|ref|XP_003806502.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Pan paniscus]
gi|402869827|ref|XP_003898947.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2
[Papio anubis]
gi|403284661|ref|XP_003933679.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Saimiri
boliviensis boliviensis]
gi|426344311|ref|XP_004038717.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 isoform 2
[Gorilla gorilla gorilla]
gi|221044064|dbj|BAH13709.1| unnamed protein product [Homo sapiens]
Length = 359
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 81 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 140
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 141 KLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 200
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 201 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 260
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 261 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 319
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 320 FDDDIVEKIDAQAIEEFYGLTSDISKNS 347
>gi|109133433|ref|XP_001082678.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Macaca
mulatta]
Length = 530
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/235 (26%), Positives = 101/235 (42%), Gaps = 44/235 (18%)
Query: 17 IPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE--------------------------- 49
IP +I + +A F + ED+HEFL++ ++
Sbjct: 138 IPGRVIQPSQALAADFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIF 197
Query: 50 -GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKC 101
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 198 GGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLC 257
Query: 102 GYKTEATKQFSIEKPPIVFILLLKRFNYLC-LKISCAVQVPLYLEFGKFMHCRRN----- 155
+ A+K ++ V IL+LKRF+ + K++ V P L+ +M +
Sbjct: 258 LQRAPASKTLTLHTSAKVLILVLKRFSDVTGSKLAKNVHYPECLDMQPYMSQQNTGPLVY 317
Query: 156 -LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 318 VLYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>gi|90079713|dbj|BAE89536.1| unnamed protein product [Macaca fascicularis]
Length = 359
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 81 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 140
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 141 KLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 200
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 201 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 260
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 261 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 319
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 320 FDDDIVEKIDAQAIEEFYGLTSDISQNS 347
>gi|340727179|ref|XP_003401926.1| PREDICTED: hypothetical protein LOC100649397 [Bombus terrestris]
Length = 977
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 27/222 (12%)
Query: 17 IPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLELSLD-IYQLS 75
IPE+ + K + Y R EDS ++ + G RS L S +++ ++LD + LS
Sbjct: 759 IPEMYTDSQKAVESWKRYLRSEDS--MIVDVFVGQLRSSLHCTS-CDHVSVTLDPFWDLS 815
Query: 76 ----------SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLK 125
L + L F +E L D C KC + + TK FSI+K P + ++ LK
Sbjct: 816 LPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVIHLK 875
Query: 126 RFNYLCL---KISCAVQVPLY-LEFGKFM-----HCRRNLVSAVIHHGSSSFSGHYNC-I 175
RF+ + K++ V PL L+ F C NL V +H ++ SGHY
Sbjct: 876 RFSPMERFRSKLNVMVDFPLTGLDLSAFAAPRVPGCTYNLY-GVANHSGTTHSGHYTAYC 934
Query: 176 GSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIYELLPSSLH 215
SG +H + D RV + V + AYV+ YE P S H
Sbjct: 935 KHPYSGEWHEYNDSRVSVVPARSVVSNEAYVLFYEQQPHSSH 976
>gi|163914907|ref|NP_001106637.1| ubiquitin specific peptidase 46 [Xenopus (Silurana) tropicalis]
gi|160774253|gb|AAI55531.1| LOC100127879 protein [Xenopus (Silurana) tropicalis]
Length = 369
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 106/257 (41%), Gaps = 61/257 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---------- 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I L
Sbjct: 92 ATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNTIADLLLEERKQEKQNG 151
Query: 57 KVISGS---------------------------------------NNLELSLDIYQLSSL 77
K+ +G+ + L+LS+D+ Q +S+
Sbjct: 152 KLQNGTLEAPEPEKSDLTWVHEIFQGTLTNETRCLNCEAVSSKDEDFLDLSVDVEQNTSI 211
Query: 78 DEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----L 132
L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 212 THCLRGFSNTETLCSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFKYMDQLHRYT 271
Query: 133 KISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYF 186
K+S V PL L G + R +LV+ V+H GS GHY I S G + F
Sbjct: 272 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLLF 330
Query: 187 GDDRVQASNLQQVTNAY 203
DD V+ + Q + Y
Sbjct: 331 DDDIVEKIDAQAIEEFY 347
>gi|350424674|ref|XP_003493875.1| PREDICTED: hypothetical protein LOC100741560 [Bombus impatiens]
Length = 979
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 27/222 (12%)
Query: 17 IPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLELSLD-IYQLS 75
IPE+ + K + Y R EDS ++ + G RS L S +++ ++LD + LS
Sbjct: 761 IPEMYTDSQKAVESWKRYLRSEDS--MIVDVFVGQLRSSLHCTS-CDHVSVTLDPFWDLS 817
Query: 76 ----------SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLK 125
L + L F +E L D C KC + + TK FSI+K P + ++ LK
Sbjct: 818 LPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVIHLK 877
Query: 126 RFNYLCL---KISCAVQVPLY-LEFGKFM-----HCRRNLVSAVIHHGSSSFSGHYNC-I 175
RF+ + K++ V PL L+ F C NL V +H ++ SGHY
Sbjct: 878 RFSPMERFRSKLNVMVDFPLTGLDLSAFAAPRVPGCTYNLY-GVANHSGTTHSGHYTAYC 936
Query: 176 GSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIYELLPSSLH 215
SG +H + D RV + V + AYV+ YE P S H
Sbjct: 937 KHPYSGEWHEYNDSRVSVVPARSVVSNEAYVLFYEQQPHSSH 978
>gi|119613077|gb|EAW92671.1| hCG1807742 [Homo sapiens]
Length = 314
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 55 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 114
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 115 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 174
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M +
Sbjct: 175 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLVYV 234
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 235 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 288
>gi|332244679|ref|XP_003271501.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like isoform 1 [Nomascus leucogenys]
gi|332267671|ref|XP_003282805.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Nomascus leucogenys]
gi|441611210|ref|XP_004088001.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like isoform 2 [Nomascus leucogenys]
Length = 529
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMRKACLPGHKQVDPHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKVI--SGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K + G ++ L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCQGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K ++ V IL+LKRF+ + K++ VQ P L+ +M +
Sbjct: 259 QKAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS + V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFY 372
>gi|307207931|gb|EFN85490.1| Ubiquitin carboxyl-terminal hydrolase 46 [Harpegnathos saltator]
Length = 353
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 69/263 (26%), Positives = 108/263 (41%), Gaps = 57/263 (21%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH-----RSYLKVISG 61
A Q + +I P+ I +L+ F+ Y +D+HEFL +LI I+ R+ K G
Sbjct: 78 ATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILERTQSKPAGG 137
Query: 62 S----------------------------------------NNLELSLDIYQLSSLDEAL 81
+ +L +D+ Q +S+ L
Sbjct: 138 KCGAGDAGSPPEPTWVHEIFQGILTSETRCLNCETVSSKDEDFFDLQVDVDQNTSITHCL 197
Query: 82 GQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----LKISC 136
F E L DN ++C+ C EA K+ ++K P++ L LKRF Y+ +K+S
Sbjct: 198 RCFSNTETLCSDNKFKCDHCSSYQEAQKRMRVKKLPMILALHLKRFKYVEQYNRHIKVSH 257
Query: 137 AVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDR 190
V PL L ++ R +LV+ VIH GS GHY I S G + F DD
Sbjct: 258 RVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISI-VKSHGFWLLFDDDM 316
Query: 191 VQASNLQQVTNAYVVIYELLPSS 213
V + + + Y + ++ SS
Sbjct: 317 VDKIDASTIEDFYGLTSDIQKSS 339
>gi|378925634|ref|NP_001243783.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 11 [Homo
sapiens]
gi|449061954|sp|C9JVI0.1|U17LB_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
11
Length = 530
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQTNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>gi|219110875|ref|XP_002177189.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411724|gb|EEC51652.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1003
Score = 71.2 bits (173), Expect = 3e-10, Method: Composition-based stats.
Identities = 70/277 (25%), Positives = 108/277 (38%), Gaps = 81/277 (29%)
Query: 12 SGSAIIPELIINKLKLIA-------HHFEYYRPEDSHEFLLYLIE--------------- 49
SGS++ P I+ + + + F R ED+HEFL++L++
Sbjct: 314 SGSSLAPRAIVQAVPTLGSCGSRKGYKFRPGRQEDAHEFLVHLLDAMNDGELKEAGINQN 373
Query: 50 ------------------------GIHRSYLKVISGSN---------NLELSLDIYQLSS 76
G RS ++ S +N NL L + +S
Sbjct: 374 ASGWRDRLPIPRLDETTFIHRIFGGYFRSQVRCTSCNNRSNTYDPLLNLSLEVSRKACNS 433
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY------- 129
+ +AL +F KE L N ++C C ATKQ ++ +PP+ + LKRF Y
Sbjct: 434 VAQALHEFTRKETLDSQNQWKCSGCKKYVCATKQLTVFRPPLSLCIQLKRFTYSGRLKFS 493
Query: 130 ----------LCLKISCAVQVP--LYLEFGKFMHCRRNLVSAVIHHGSSSFSGHYNCI-- 175
KIS +++ P L L C +L VIH G S+ SGHY
Sbjct: 494 VGFGSFGNGGGGQKISKSIEFPAQLKLPLSDGRSCGYSLTGIVIHVGGSASSGHYTAYVR 553
Query: 176 --GSTSSGSYHYFGDDRVQASNLQQV---TNAYVVIY 207
G S + + D V+A + Q V +AY++ Y
Sbjct: 554 KPGGGSKSQWFHMDDSFVEAVSEQTVLRQRDAYLLFY 590
>gi|379030599|ref|NP_001243788.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 18 [Homo
sapiens]
gi|449061958|sp|D6R9N7.1|U17LI_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
18
Length = 530
Score = 71.2 bits (173), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQTNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>gi|379030602|ref|NP_001243789.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 19 [Homo
sapiens]
gi|449061959|sp|D6RCP7.1|U17LJ_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
19
Length = 530
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQTNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>gi|402912993|ref|XP_003919017.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Papio anubis]
Length = 529
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL+++++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFIVDAMKKACLPGHKQVDHDSEDTTLIHQIFG 198
Query: 50 GIHRSYLKVI--SGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K + G ++ L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQSVKQALEQVVKPEELNGENAYHCGLCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K F++ V IL+LKRF+ + K++ VQ P L+ +M +
Sbjct: 259 QKAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G +GHY G ++ D V A ++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWCCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFY 372
>gi|335293447|ref|XP_003129021.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46 [Sus scrofa]
Length = 376
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 98 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 157
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 158 KLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 217
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 218 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 277
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 278 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 336
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 337 FDDDIVEKIDAQAIEEFYGLTSDISKNS 364
>gi|224056573|ref|XP_002298917.1| predicted protein [Populus trichocarpa]
gi|222846175|gb|EEE83722.1| predicted protein [Populus trichocarpa]
Length = 665
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 67/248 (27%), Positives = 105/248 (42%), Gaps = 50/248 (20%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE--------------------- 49
E G + P I+ ++ I ED+HEFL LI
Sbjct: 408 ECGGPLSPSRILLHMRKINCQIGDGSQEDAHEFLRLLIASMQSICLERLGGEDKVDPRLQ 467
Query: 50 ----------GIHRSYLKVISG-------SNNLELSLDIY-QLSSLDEALGQFFAKEYLV 91
G+ RS +K + N ++L+L+I+ + SL++AL QF E L
Sbjct: 468 ETTFIQHTFGGLLRSKVKCLRCHHESERYENIMDLTLEIFGWVESLEDALTQFTTPEELD 527
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFM 150
+N+Y+C +C A KQ SI + P + ++LKRF KI+ + P L+ FM
Sbjct: 528 GENMYRCGRCAAYVRARKQLSIHEAPNILTIVLKRFQEGKYGKINKCITFPDMLDMIPFM 587
Query: 151 HCRRN------LVSAVIHHGS--SSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVT-- 200
+ L + V+H + +SFSGHY GS+ D V ++ QV
Sbjct: 588 TGMGDVPPLYMLYAVVVHLDTLNASFSGHYVAYVKDLRGSWFKIDDTEVHPVSMSQVMLE 647
Query: 201 NAYVVIYE 208
AY++ Y+
Sbjct: 648 GAYILFYK 655
>gi|345806341|ref|XP_003435418.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like, partial
[Canis lupus familiaris]
Length = 597
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/223 (26%), Positives = 97/223 (43%), Gaps = 49/223 (21%)
Query: 32 FEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN--------------------------- 64
F ++ ED+HE+L+++++ + ++ L S++
Sbjct: 153 FHTHKQEDAHEYLMFILDAMQQACLPEDKPSDSQHAQDSTLIQHIFGGYWRSQIQCLHCQ 212
Query: 65 ---------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
L++SLDI S+ +AL Q E L +N Y C KC K A+K +
Sbjct: 213 GISSTLEPYLDISLDIGAAQSVSQALEQLVKPEMLEGENAYHCSKCLEKVPASKVLTWHS 272
Query: 116 PPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSF 168
V IL+LKRF ++ K++ +Q P L+ + RR L + ++H G S
Sbjct: 273 CAKVLILVLKRFSDFTGNKMTKEMQYPECLDMQHSLSERRAGPLVYVLYAVLVHAGWSCH 332
Query: 169 SGHYNCIGSTSSGSYHYFGDDRVQA----SNLQQVTNAYVVIY 207
SG Y C +G +H D ++ A L+Q+ AYV+ Y
Sbjct: 333 SGRYFCFVKAGNGQWHKMDDAKISACVVTCALRQL--AYVLFY 373
>gi|51535049|dbj|BAD37420.1| putative ubiquitin-specific protease 15 [Oryza sativa Japonica
Group]
gi|51535599|dbj|BAD37542.1| putative ubiquitin-specific protease 15 [Oryza sativa Japonica
Group]
Length = 1069
Score = 71.2 bits (173), Expect = 4e-10, Method: Composition-based stats.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 49/247 (19%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS------- 62
+ES P+ I++ L I + + R ED+HEF+ + I+ + + L G
Sbjct: 262 SESMHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACLDEFGGEKAVDPST 321
Query: 63 -------------------------------NNLELSLDIY-QLSSLDEALGQFFAKEYL 90
N ++L+++I+ SL+E L +F A E+L
Sbjct: 322 QETTLIQHIFGGRLQSQVQCTACGMVSNRYENMMDLTVEIHGDADSLEECLDKFTAVEWL 381
Query: 91 VRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKF 149
DN Y+C+ C +A K+ ++ + P + + LKRF K++ V P+ L+ +
Sbjct: 382 DGDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRFQSGRFGKLNKRVTFPMKLDLTPY 441
Query: 150 MHC-----RRNLVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--T 200
M + +L + V+H ++SF GHY C G ++ D +V A + ++V
Sbjct: 442 MSSTDGSDQYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVDEEEVHAQ 501
Query: 201 NAYVVIY 207
AY+++Y
Sbjct: 502 GAYMLLY 508
>gi|380013085|ref|XP_003690600.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Apis
florea]
Length = 542
Score = 71.2 bits (173), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 107/268 (39%), Gaps = 72/268 (26%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS--------- 60
+G AI PE + + + F Y+ +D+HEFL Y+++ +H L+++
Sbjct: 266 GSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYMLDRLHTELLQLLPRLGHEPLGL 325
Query: 61 -GSNNL-----------------------------ELSLDI-----------YQLSSLDE 79
G ++ +LSLDI ++ SL
Sbjct: 326 RGKQSIVTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTY 385
Query: 80 ALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----LKIS 135
+L +FF E L LY C+ C K +TK+F I + P V L +KRF + C K+
Sbjct: 386 SLTRFFKVEELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRW-CNSYRSKVD 444
Query: 136 CAVQVPLY-LEFGKFMHCRRN-------------LVSAVIHHGSSSFSGHYNCIGSTSSG 181
V P+ L+ F N L + ++HHGS + +GHY + G
Sbjct: 445 TQVDFPMKSLDMSAFTVRGVNGTKLGASNSHLYDLAAVIVHHGSGAGTGHYTAF-AVHDG 503
Query: 182 SYHYFGDDRVQASNLQQVTNA--YVVIY 207
+ +F D V+ + V Y++ Y
Sbjct: 504 QWFHFNDSSVRPATTDAVAKCKPYILFY 531
>gi|297303100|ref|XP_002806114.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like, partial
[Macaca mulatta]
Length = 347
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL-----------------KVIS 60
P +I + + F + ED+HEFL+++++ + R+ L ++
Sbjct: 38 PGHVIQPSQALVAGFHRGKQEDAHEFLMFIVDAMKRACLPGHKQVDHDSEDTTLIHQIFG 97
Query: 61 GSNN------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 98 GCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQSVKQALEQVVKPEELNGENAYHCGLCL 157
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K F++ V IL+LKRF+ + K++ VQ P L+ +M +
Sbjct: 158 QKAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLVYV 217
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V A ++ V AYV+ Y
Sbjct: 218 LYAVLVHAGWSCHNGHYLSYVKAPGGQWYKMDDAEVTACSIASVLSQQAYVLFY 271
>gi|51971603|dbj|BAD44466.1| unknown protein [Arabidopsis thaliana]
Length = 631
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 54/242 (22%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--------------- 62
P II++L I Y R ED+HEF+ Y I+ + L G
Sbjct: 232 PMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCLDEFGGEKIVPPRSQETTLIQY 291
Query: 63 -----------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQC 98
N ++L ++++ SL+E L QF A+E+L DN+Y+C
Sbjct: 292 IFGGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAGSLEECLDQFTAEEWLHGDNMYKC 351
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFN---YLCLKISCAVQVPLYLEFGKFMHCRRN 155
++C +A K+ +I + P + + LKR+ Y K++ + P L+ +M +
Sbjct: 352 DRCSDYVKACKRLTIRRAPNILTIALKRYQGGRY--GKLNKRISFPETLDLNPYMSEGGD 409
Query: 156 ------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
L + ++H ++SF GHY C G+++ D +++ L+ V AY++
Sbjct: 410 GSDVYKLYAVIVHLDMLNASFFGHYICYIKDFCGNWYRIDDSEIESVELEDVLSQRAYML 469
Query: 206 IY 207
+Y
Sbjct: 470 LY 471
>gi|405972649|gb|EKC37407.1| Ubiquitin carboxyl-terminal hydrolase 3 [Crassostrea gigas]
Length = 479
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 74/282 (26%), Positives = 111/282 (39%), Gaps = 76/282 (26%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
+RKTL A S AI PE + + + F Y+ +D+HEF+ YL++ +H L ++
Sbjct: 182 LRKTLCALWQGSKGAISPESLFAVIWKVVPRFRGYQQQDAHEFMRYLLDRLHTELLTLLP 241
Query: 61 GSNN-----------------------------------------LELSLDIYQ------ 73
N+ L+LSLDI Q
Sbjct: 242 YPNSDSPFIGPKGKSTIVTAIFGGLLQNEVTCLVCGVESKKHDPFLDLSLDIPQQFCTRG 301
Query: 74 ---------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
+L + L F E L LY C C K +TK+F I + P V L +
Sbjct: 302 VKAKDGEQLRCTLSDCLQSFTELEELEESELYMCSTCKKKQRSTKKFWIRRLPNVLCLHI 361
Query: 125 KRFNY---LCLKISCAVQVPLY-LEFGKF----MHCRR---------NLVSAVIHHGSSS 167
KRF + +K+ V+ PL L K+ +H R +L + V+HHGS +
Sbjct: 362 KRFRWQSFFRVKLETFVEFPLEGLNMHKYILDNLHETRGSGSGSNEYDLAAVVVHHGSGA 421
Query: 168 FSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVT--NAYVVIY 207
SGHY + G + +F D V + V AY++ Y
Sbjct: 422 GSGHYTSY-ARHEGQWFHFNDSTVTPCEPETVAKCKAYILFY 462
>gi|383854138|ref|XP_003702579.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Megachile
rotundata]
Length = 542
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 109/268 (40%), Gaps = 72/268 (26%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS--------- 60
+G AI PE + + + F Y+ +D+HEFL Y+++ +H L+++
Sbjct: 266 GSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYMLDRLHTELLQLLPRLGHEPLGL 325
Query: 61 -GSNNL-----------------------------ELSLDI-----------YQLSSLDE 79
G ++ +LSLDI ++ SL
Sbjct: 326 RGKQSIVTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTY 385
Query: 80 ALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----LKIS 135
+L +FF E L LY C+ C K +TK+F I + P V L +KRF + C K+
Sbjct: 386 SLSRFFKVEELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRW-CNSYRSKVD 444
Query: 136 CAVQVPLY-LEFGKF----MHCRR---------NLVSAVIHHGSSSFSGHYNCIGSTSSG 181
V P+ L+ F M + +L + ++HHGS + +GHY + G
Sbjct: 445 TQVDFPMKSLDMSAFTVRGMTGTKLGASNSHLYDLAAVIVHHGSGAGTGHYTAF-AVHDG 503
Query: 182 SYHYFGDDRVQASNLQQVTNA--YVVIY 207
+ +F D V+ + V Y++ Y
Sbjct: 504 QWFHFNDSSVRPATTDAVAKCKPYILFY 531
>gi|125598076|gb|EAZ37856.1| hypothetical protein OsJ_22202 [Oryza sativa Japonica Group]
Length = 995
Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 49/247 (19%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS------- 62
+ES P+ I++ L I + + R ED+HEF+ + I+ + + L G
Sbjct: 188 SESMHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACLDEFGGEKAVDPST 247
Query: 63 -------------------------------NNLELSLDIY-QLSSLDEALGQFFAKEYL 90
N ++L+++I+ SL+E L +F A E+L
Sbjct: 248 QETTLIQHIFGGRLQSQVQCTACGMVSNRYENMMDLTVEIHGDADSLEECLDKFTAVEWL 307
Query: 91 VRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKF 149
DN Y+C+ C +A K+ ++ + P + + LKRF K++ V P+ L+ +
Sbjct: 308 DGDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRFQSGRFGKLNKRVTFPMKLDLTPY 367
Query: 150 MHC-----RRNLVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--T 200
M + +L + V+H ++SF GHY C G ++ D +V A + ++V
Sbjct: 368 MSSTDGSDQYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVDEEEVHAQ 427
Query: 201 NAYVVIY 207
AY+++Y
Sbjct: 428 GAYMLLY 434
>gi|15236036|ref|NP_194895.1| ubiquitin carboxyl-terminal hydrolase 18 [Arabidopsis thaliana]
gi|166201351|sp|Q67XW5.2|UBP18_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 18; AltName:
Full=Deubiquitinating enzyme 18; Short=AtUBP18; AltName:
Full=Ubiquitin thioesterase 18; AltName:
Full=Ubiquitin-specific-processing protease 18
gi|3281861|emb|CAA19756.1| putative protein [Arabidopsis thaliana]
gi|7270070|emb|CAB79885.1| putative protein [Arabidopsis thaliana]
gi|23296513|gb|AAN13075.1| unknown protein [Arabidopsis thaliana]
gi|332660543|gb|AEE85943.1| ubiquitin carboxyl-terminal hydrolase 18 [Arabidopsis thaliana]
Length = 631
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 54/242 (22%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--------------- 62
P II++L I Y R ED+HEF+ Y I+ + L G
Sbjct: 232 PMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCLDEFGGEKIVPPRSQETTLIQY 291
Query: 63 -----------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQC 98
N ++L ++++ SL+E L QF A+E+L DN+Y+C
Sbjct: 292 IFGGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAGSLEECLDQFTAEEWLHGDNMYKC 351
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFN---YLCLKISCAVQVPLYLEFGKFMHCRRN 155
++C +A K+ +I + P + + LKR+ Y K++ + P L+ +M +
Sbjct: 352 DRCSDYVKACKRLTIRRAPNILTIALKRYQGGRY--GKLNKRISFPETLDLNPYMSEGGD 409
Query: 156 ------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
L + ++H ++SF GHY C G+++ D +++ L+ V AY++
Sbjct: 410 GSDVYKLYAVIVHLDMLNASFFGHYICYIKDFCGNWYRIDDSEIESVELEDVLSQRAYML 469
Query: 206 IY 207
+Y
Sbjct: 470 LY 471
>gi|322790247|gb|EFZ15246.1| hypothetical protein SINV_08745 [Solenopsis invicta]
Length = 355
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 69/265 (26%), Positives = 108/265 (40%), Gaps = 59/265 (22%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH------RSYLKVIS 60
A Q + +I P+ I +L+ F+ Y +D+HEFL +LI I+ R+ K
Sbjct: 78 ATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERTQSKPTG 137
Query: 61 GS-----------------------------------------NNLELSLDIYQLSSLDE 79
G + +L +D+ Q +S+
Sbjct: 138 GKCGAGDAAGSPPEPTWVHEIFQGILTSETRCLNCETVSSKDEDFFDLQVDVDQNTSITH 197
Query: 80 ALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----LKI 134
L F E L DN ++C+ C EA K+ ++K P++ L LKRF Y+ +K+
Sbjct: 198 CLRCFSNTETLCSDNKFKCDHCSSYQEAQKRMRVKKLPMILALHLKRFKYVEQYNRHIKV 257
Query: 135 SCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGD 188
S V PL L ++ R +LV+ VIH GS GHY I S G + F D
Sbjct: 258 SHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISI-VKSHGFWLLFDD 316
Query: 189 DRVQASNLQQVTNAYVVIYELLPSS 213
D V + + + Y + ++ SS
Sbjct: 317 DMVDKIDASTIEDFYGLTSDIQKSS 341
>gi|378925638|ref|NP_001243786.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 17 [Homo
sapiens]
gi|449061957|sp|D6RBQ6.1|U17LH_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
17
Length = 530
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M +
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V A+++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTAASITSVLSQQAYVLFY 372
>gi|66501571|ref|XP_392160.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Apis
mellifera]
Length = 541
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/268 (24%), Positives = 107/268 (39%), Gaps = 72/268 (26%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS--------- 60
+G AI PE + + + F Y+ +D+HEFL Y+++ +H L+++
Sbjct: 265 GSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYMLDRLHTELLQLLPRLGHEPLGL 324
Query: 61 -GSNNL-----------------------------ELSLDI-----------YQLSSLDE 79
G ++ +LSLDI ++ SL
Sbjct: 325 RGKQSIVTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTY 384
Query: 80 ALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----LKIS 135
+L +FF E L LY C+ C K +TK+F I + P V L +KRF + C K+
Sbjct: 385 SLTRFFKVEELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRW-CNSYRSKVD 443
Query: 136 CAVQVPLY-LEFGKFMHCRRN-------------LVSAVIHHGSSSFSGHYNCIGSTSSG 181
V P+ L+ F N L + ++HHGS + +GHY + G
Sbjct: 444 TQVDFPMKSLDMSAFTVRGVNGTKLGASNSHLYDLAAVIVHHGSGAGTGHYTAF-AVHDG 502
Query: 182 SYHYFGDDRVQASNLQQVTNA--YVVIY 207
+ +F D V+ + V Y++ Y
Sbjct: 503 QWFHFNDSSVRPATTDAVAKCKPYILFY 530
>gi|328784869|ref|XP_392493.4| PREDICTED: hypothetical protein LOC408964 [Apis mellifera]
Length = 987
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 27/222 (12%)
Query: 17 IPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLELSLD-IYQLS 75
IPE+ + K + Y R EDS ++ + G RS L S +++ ++LD + LS
Sbjct: 769 IPEMYTDSQKAVESWKRYLRSEDS--MIVDVFVGQLRSSLHCTS-CDHVSVTLDPFWDLS 825
Query: 76 ----------SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLK 125
L + L F +E L D C KC + + TK FSI+K P + ++ LK
Sbjct: 826 LPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVIHLK 885
Query: 126 RFNYLCL---KISCAVQVPLY-LEFGKFM-----HCRRNLVSAVIHHGSSSFSGHYNC-I 175
RF+ + K++ V PL L+ F C NL V +H ++ SGHY
Sbjct: 886 RFSPMERFRSKLNVMVDFPLTGLDLSAFAAPRVPGCTYNLY-GVANHSGTTHSGHYTAYC 944
Query: 176 GSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIYELLPSSLH 215
S +H + D RV A + V + AYV+ YE P S H
Sbjct: 945 KHPYSAEWHEYNDSRVSAVPARSVVSNEAYVLFYEQQPHSSH 986
>gi|297468710|ref|XP_002706267.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 763
Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats.
Identities = 66/252 (26%), Positives = 108/252 (42%), Gaps = 51/252 (20%)
Query: 4 TLAACQAESGSAIIP--ELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISG 61
TL A +A A++ E+I + L+A F ++ ED+HEFL++ + + + L
Sbjct: 136 TLCAMRAHVTRALLHAGEVIRPRKDLLAG-FHRHQQEDAHEFLMFTLNAMQQGCLSASQP 194
Query: 62 SNN-----------------------------------LELSLDIYQLSSLDEALGQFFA 86
S + L++SLDI S+++AL +
Sbjct: 195 SGHASEDTTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVK 254
Query: 87 KEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-LKISCAVQVPLYLE 145
E L DN Y C C K ATK+ ++ V +L+LKRF + K + V+ P L+
Sbjct: 255 PEKLDADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEVRYPQCLD 314
Query: 146 FGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN---- 195
+ R+ L + ++H G S GHY C +G ++ D +V A +
Sbjct: 315 LQPYTSERKAGPLGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAA 374
Query: 196 LQQVTNAYVVIY 207
L Q +AYV+ Y
Sbjct: 375 LSQ--SAYVLFY 384
>gi|119922838|ref|XP_001254514.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 480
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 19 ELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN-------------- 64
E+I + L+A F ++ ED+HEFL++ + + + L S +
Sbjct: 100 EVIRPRKDLLAG-FHRHQQEDAHEFLMFTLNAMQQGCLSASQPSGHASEDTTVIRQIFGG 158
Query: 65 ---------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGY 103
L++SLDI S+++AL + E L DN Y C C
Sbjct: 159 TWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDCGVCLR 218
Query: 104 KTEATKQFSIEKPPIVFILLLKRFNYLC-LKISCAVQVPLYLEFGKFMHCRRN------L 156
K ATK+ ++ V +L+LKRF + K + V+ P L+ + R+ L
Sbjct: 219 KVPATKRLTLHSTSQVLVLVLKRFTLVSGAKRAQEVRYPQCLDLQPYTSERKAGPLGYVL 278
Query: 157 VSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+ ++H G S GHY C +G ++ D +V A + +AYV+ Y
Sbjct: 279 YAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFY 331
>gi|115469288|ref|NP_001058243.1| Os06g0654000 [Oryza sativa Japonica Group]
gi|113596283|dbj|BAF20157.1| Os06g0654000, partial [Oryza sativa Japonica Group]
Length = 944
Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats.
Identities = 60/247 (24%), Positives = 110/247 (44%), Gaps = 49/247 (19%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS------- 62
+ES P+ I++ L I + + R ED+HEF+ + I+ + + L G
Sbjct: 137 SESMHPFAPKNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACLDEFGGEKAVDPST 196
Query: 63 -------------------------------NNLELSLDIY-QLSSLDEALGQFFAKEYL 90
N ++L+++I+ SL+E L +F A E+L
Sbjct: 197 QETTLIQHIFGGRLQSQVQCTACGMVSNRYENMMDLTVEIHGDADSLEECLDKFTAVEWL 256
Query: 91 VRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKF 149
DN Y+C+ C +A K+ ++ + P + + LKRF K++ V P+ L+ +
Sbjct: 257 DGDNKYKCDGCSDYVKAQKRLTVYQAPNILTITLKRFQSGRFGKLNKRVTFPMKLDLTPY 316
Query: 150 MHC-----RRNLVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--T 200
M + +L + V+H ++SF GHY C G ++ D +V A + ++V
Sbjct: 317 MSSTDGSDQYDLYAVVVHLDMLNASFFGHYICYIKNYRGRWYKIDDCKVMAVDEEEVHAQ 376
Query: 201 NAYVVIY 207
AY+++Y
Sbjct: 377 GAYMLLY 383
>gi|15238468|ref|NP_201348.1| ubiquitin carboxyl-terminal hydrolase 17 [Arabidopsis thaliana]
gi|75262625|sp|Q9FKP5.1|UBP17_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17; AltName:
Full=Deubiquitinating enzyme 17; Short=AtUBP17; AltName:
Full=Ubiquitin thioesterase 17; AltName:
Full=Ubiquitin-specific-processing protease 17
gi|9759625|dbj|BAB11567.1| unnamed protein product [Arabidopsis thaliana]
gi|332010675|gb|AED98058.1| ubiquitin carboxyl-terminal hydrolase 17 [Arabidopsis thaliana]
Length = 731
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 105/248 (42%), Gaps = 49/248 (19%)
Query: 9 QAESG-SAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK---------- 57
+A G S + P I++KL+ I H + ED+HEFL ++ + +LK
Sbjct: 383 KARGGESPLSPIKILSKLQKIGKHLGPGKEEDAHEFLRCAVDTMQSVFLKEAPAAGPFAE 442
Query: 58 ---------------------VISGSNNLELSLDIY-----QLSSLDEALGQFFAKEYLV 91
+ S EL +D+ + SL+EAL QF A E L
Sbjct: 443 ETTLVGLTFGGYLHSKIKCMACLHKSERPELMMDLTVEIDGDIGSLEEALAQFTAYEVLD 502
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFM 150
+N Y C +C +A K+ I + P + ++LKRF K+S + P L+ +M
Sbjct: 503 GENRYFCGRCKSYQKAKKKLMILEGPNILTVVLKRFQSDNFGKLSKPIHFPELLDISPYM 562
Query: 151 -------HCRRNLVSAVIHHGSSS--FSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV-- 199
H +L + V+H + S FSGHY C T G + D V L+ V
Sbjct: 563 SDPNHGDHPVYSLYAVVVHLDAMSTLFSGHYVCYIKTLDGDWFKIDDSNVFPVQLETVLL 622
Query: 200 TNAYVVIY 207
AY+++Y
Sbjct: 623 EGAYMLLY 630
>gi|440898709|gb|ELR50140.1| Ubiquitin carboxyl-terminal hydrolase 46, partial [Bos grunniens
mutus]
Length = 371
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 93 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 152
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 153 KLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 212
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 213 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 272
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 273 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 331
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 332 FDDDIVEKIDAQAIEEFYGLTSDISKNS 359
>gi|378925636|ref|NP_001243784.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 13 [Homo
sapiens]
gi|449061955|sp|C9JLJ4.1|U17LD_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
13
Length = 530
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHPSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M +
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V A+++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTAASITSVLSQQAYVLFY 372
>gi|194680862|ref|XP_001255688.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 575
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/233 (27%), Positives = 102/233 (43%), Gaps = 45/233 (19%)
Query: 19 ELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------------------------G 50
E+I + L+A F ++ ED+HEFL++ + G
Sbjct: 153 EVIRPREDLLAG-FHRHQKEDAHEFLMFTLNAVQQGCLSASQPSGHASEDTTVIRQIFGG 211
Query: 51 IHRSY---LKVISGSNN----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGY 103
RS L+ +S S+ L++SLDI S+++AL + E L DN Y C C
Sbjct: 212 TWRSQIQCLRCLSVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDCGVCLR 271
Query: 104 KTEATKQFSIEKPPIVFILLLKRFNYLC-LKISCAVQVPLYLEFGKFMHCRRN------L 156
K ATK+ ++ V +L+LKRF + K + V+ P L+ + R+ L
Sbjct: 272 KVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEVRYPQCLDLQPYTSERKAGPLGYVL 331
Query: 157 VSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+ ++H G S GHY C +G ++ D +V A + +AYV+ Y
Sbjct: 332 YAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFY 384
>gi|401413930|ref|XP_003886412.1| conserved hypothetical protein [Neospora caninum Liverpool]
gi|325120832|emb|CBZ56387.1| conserved hypothetical protein [Neospora caninum Liverpool]
Length = 2533
Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats.
Identities = 45/124 (36%), Positives = 59/124 (47%), Gaps = 8/124 (6%)
Query: 66 ELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLK 125
E S + ++ SL E F KE L +N Y CE C K EA K I PP I++
Sbjct: 2335 EPSSEFWEGPSLQEFFDAFVKKERLFGENSYACEVCKAKREALKWQEIVSPPAHLIIIFN 2394
Query: 126 RFNYLCL-----KISCAVQVPLYLEFGKFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSS 180
R+++ K S V + L G F + L +AVIH G+S+ GHY CIG S
Sbjct: 2395 RYSWSVFSNEKKKTSTHVHINRTLTIGPFTY---ELYAAVIHAGASANVGHYYCIGRRSE 2451
Query: 181 GSYH 184
S H
Sbjct: 2452 TSLH 2455
>gi|322800426|gb|EFZ21430.1| hypothetical protein SINV_08883 [Solenopsis invicta]
Length = 604
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 109/269 (40%), Gaps = 73/269 (27%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS--------- 60
+G AI PE + + + F Y+ +D+HEFL Y+++ +H L+++
Sbjct: 327 GSNGQAISPECLFLAIWKVVPRFRGYQQQDAHEFLTYMLDRLHTELLQLLPRLGHEPLGL 386
Query: 61 -GSNNL-----------------------------ELSLDI------------YQLSSLD 78
G ++ +LSLDI ++ SL
Sbjct: 387 RGKQSIVTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRSRTKEQEEVCSLT 446
Query: 79 EALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----LKI 134
+L +FF E L LY C+ C K +TK+F I + P V L +KRF + C K+
Sbjct: 447 YSLTRFFKVEELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRW-CNSYRSKV 505
Query: 135 SCAVQVPL-YLEFGKF----MHCRR---------NLVSAVIHHGSSSFSGHYNCIGSTSS 180
V P+ L+ F + R +L + ++HHGS + +GHY +
Sbjct: 506 DTQVDFPMESLDMSAFTVRGVTGTRLGAQNSHLYDLAAVIVHHGSGAGTGHYTAF-AVHD 564
Query: 181 GSYHYFGDDRVQASNLQQVTNA--YVVIY 207
G + +F D V+ + V Y++ Y
Sbjct: 565 GQWFHFNDSSVRPATTDAVAKCKPYILFY 593
>gi|379030604|ref|NP_001243790.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 20 [Homo
sapiens]
gi|449061960|sp|D6RJB6.1|U17LK_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
20
Length = 530
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>gi|308802820|ref|XP_003078723.1| Ubiquitin C-terminal hydrolase (ISS) [Ostreococcus tauri]
gi|116057176|emb|CAL51603.1| Ubiquitin C-terminal hydrolase (ISS) [Ostreococcus tauri]
Length = 1084
Score = 70.9 bits (172), Expect = 4e-10, Method: Composition-based stats.
Identities = 51/163 (31%), Positives = 77/163 (47%), Gaps = 12/163 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q +S+ L F AKE L +++ +QC++CG EA K+ I+ P V L L
Sbjct: 906 LDLSVDVDQNTSITACLNNFSAKELLDKNDKFQCDRCGGLHEAQKRLLIQSAPKVLSLHL 965
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFM------HCRRNLVSAVIHHGSSSFSGHYN 173
KRF Y+ K++ V P L+ R L S V+H GS GHY
Sbjct: 966 KRFKYIEALGRHAKLNHRVVFPSELKLPNLSDDADDPDVRYVLFSVVVHIGSGPNHGHYV 1025
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSSLHH 216
C ++ + F DD V+ + +Q+ + E P H
Sbjct: 1026 CF-VKNNHRWFLFDDDTVEVVDEEQLHRVFGSTVERGPMGSEH 1067
>gi|334191675|ref|NP_001229255.1| ubiquitin specific peptidase 17-like family member 25 [Homo
sapiens]
gi|334191677|ref|NP_001229257.1| ubiquitin specific peptidase 17-like family member 26 [Homo
sapiens]
gi|334191681|ref|NP_001229259.1| ubiquitin specific peptidase 17-like family member 27 [Homo
sapiens]
gi|334191683|ref|NP_001229260.1| ubiquitin specific peptidase 17-like family member 28 [Homo
sapiens]
gi|334191685|ref|NP_001229261.1| ubiquitin specific peptidase 17-like family member 29 [Homo
sapiens]
gi|337756779|ref|NP_001229256.1| ubiquitin specific peptidase 17-like family member 24 [Homo
sapiens]
gi|379030622|ref|NP_001243796.1| ubiquitin specific peptidase 17-like family member 30 [Homo
sapiens]
gi|187663978|sp|Q0WX57.2|U17LO_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
24; AltName: Full=Deubiquitinating enzyme 17; AltName:
Full=Ubiquitin thioesterase 17; AltName:
Full=Ubiquitin-specific-processing protease 17
Length = 530
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>gi|380020720|ref|XP_003694227.1| PREDICTED: uncharacterized protein LOC100870505 [Apis florea]
Length = 1055
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 68/222 (30%), Positives = 101/222 (45%), Gaps = 27/222 (12%)
Query: 17 IPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLELSLD-IYQLS 75
IPE+ + K + Y R EDS ++ + G RS L S +++ ++LD + LS
Sbjct: 837 IPEMYTDSQKAVESWKRYLRSEDS--MIVDVFVGQLRSSLHCTS-CDHVSVTLDPFWDLS 893
Query: 76 ----------SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLK 125
L + L F +E L D C KC + + TK FSI+K P + ++ LK
Sbjct: 894 LPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVIHLK 953
Query: 126 RFNYLCL---KISCAVQVPLY-LEFGKFM-----HCRRNLVSAVIHHGSSSFSGHYNC-I 175
RF+ + K++ V PL L+ F C NL V +H ++ SGHY
Sbjct: 954 RFSPMERFRSKLNVMVDFPLTGLDLSAFAAPRVPGCTYNLY-GVANHSGTTHSGHYTAYC 1012
Query: 176 GSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIYELLPSSLH 215
S +H + D RV A + V + AYV+ YE P S H
Sbjct: 1013 KHPYSAEWHEYNDSRVSAVPARSVVSNEAYVLFYEQQPHSSH 1054
>gi|440897206|gb|ELR48950.1| Ubiquitin carboxyl-terminal hydrolase 17-like protein 6, partial
[Bos grunniens mutus]
Length = 334
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 64/250 (25%), Positives = 106/250 (42%), Gaps = 47/250 (18%)
Query: 4 TLAACQAESGSAII--PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISG 61
TL A +A A++ E+I + L+A F ++ ED+HEFL++ + + + L
Sbjct: 40 TLCAMRAHVTRALLHAGEVIRPRKDLLAG-FHRHQQEDAHEFLMFTLNAMQQGCLSASQP 98
Query: 62 SNN-----------------------------------LELSLDIYQLSSLDEALGQFFA 86
S + L++SLDI S+++AL +
Sbjct: 99 SGHASEDTTVIRQIFGGTWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVK 158
Query: 87 KEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-LKISCAVQVPLYLE 145
E L DN Y C C K ATK+ ++ V +L+LKRF + K + V+ P L+
Sbjct: 159 PEKLDADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEVRYPQCLD 218
Query: 146 FGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV 199
+ R+ L + ++H G S GHY C +G ++ D +V A +
Sbjct: 219 LQPYTSERKAGPLGYVLYAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAA 278
Query: 200 --TNAYVVIY 207
+AYV+ Y
Sbjct: 279 LSQSAYVLFY 288
>gi|119929781|ref|XP_874913.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 558
Score = 70.9 bits (172), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 19 ELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN-------------- 64
E+I + L+A F ++ ED+HEFL++ + + + L S +
Sbjct: 178 EVIRPRKDLLAG-FHRHQQEDAHEFLMFTLNAMQQGCLSASQPSGHASEDTTVIRQIFGG 236
Query: 65 ---------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGY 103
L++SLDI S+++AL + E L DN Y C C
Sbjct: 237 TWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDCGVCLR 296
Query: 104 KTEATKQFSIEKPPIVFILLLKRFNYLC-LKISCAVQVPLYLEFGKFMHCRRN------L 156
K ATK+ ++ V +L+LKRF + K + V+ P L+ + R+ L
Sbjct: 297 KVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEVRYPQCLDLQPYTSERKAGPLGYVL 356
Query: 157 VSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+ ++H G S GHY C +G ++ D +V A + +AYV+ Y
Sbjct: 357 YAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFY 409
>gi|440896875|gb|ELR48685.1| Ubiquitin carboxyl-terminal hydrolase 17, partial [Bos grunniens
mutus]
Length = 468
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 19 ELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN-------------- 64
E+I + L+A F ++ ED+HEFL++ + + + L S +
Sbjct: 88 EVIRPRKDLLAG-FHRHQQEDAHEFLMFTLNAMQQGCLSASQPSGHASEDTTIIRQIFGG 146
Query: 65 ---------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGY 103
L++SLDI S+++AL + E L DN Y C C
Sbjct: 147 TWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDCGVCLR 206
Query: 104 KTEATKQFSIEKPPIVFILLLKRFNYLC-LKISCAVQVPLYLEFGKFMHCRRN------L 156
K ATK+ ++ V +L+LKRF + K + V+ P L+ + R+ L
Sbjct: 207 KVPATKRLALHSTSQVLVLVLKRFTPVSGAKRAQEVRYPQCLDLQPYTSERKAGPLGYVL 266
Query: 157 VSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+ ++H G S GHY C +G ++ D +V A + +AYV+ Y
Sbjct: 267 YAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFY 319
>gi|281201291|gb|EFA75503.1| peptidase C19 family protein [Polysphondylium pallidum PN500]
Length = 643
Score = 70.5 bits (171), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 71/135 (52%), Gaps = 8/135 (5%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
++LS+DI Q SL +AL +F E L N Y+C KC +A+K+ +I P V + L
Sbjct: 260 MDLSVDINQADSLSKALQRFVKAEQLDGSNKYKCCKCKKLVKASKRMTIHVAPPVLTVQL 319
Query: 125 KRFNYLCL---KISCAVQVPLYLEFGKFMHCRRNLV-----SAVIHHGSSSFSGHYNCIG 176
KRF++L KIS VQ L +M N V ++H GSS+ SGHY C
Sbjct: 320 KRFSFLGFHGGKISKPVQFDPVLNLTPYMTTSTNDVVYDLYGVLVHAGSSTNSGHYYCYT 379
Query: 177 STSSGSYHYFGDDRV 191
+SSG +H D+ V
Sbjct: 380 KSSSGVWHGLNDESV 394
>gi|326524007|dbj|BAJ97014.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1026
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 105/242 (43%), Gaps = 49/242 (20%)
Query: 15 AIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS------------ 62
A P I+++L+ I + + R ED+HEF+ + I+ + + L G
Sbjct: 197 AFAPMNILSRLRNIGGNLGFGRQEDAHEFMRFAIDKMQSACLDEYGGEKVVDHSTQETTV 256
Query: 63 --------------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLVRDNL 95
N ++L+++I+ SL++ L QF A E+L DN
Sbjct: 257 IQHIFGGRLQSQVQCTACGMVSNRYENMMDLTVEIHGDAESLEKCLDQFTAVEWLDGDNK 316
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRR 154
Y+C+ C +A K ++ + P + + LKRF K++ V P L+ +M
Sbjct: 317 YKCDGCNDYVKARKHLTVHQAPNILTITLKRFQSGRFGKLNKKVTFPTTLDLTPYMSTTD 376
Query: 155 -----NLVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
+L + V+H ++SF GHY C G + D +V A + ++V AY++
Sbjct: 377 GTDQYDLYAVVVHLDMLNASFFGHYICYIKHHRGCWLKIDDCKVMAVDEEEVHAQGAYML 436
Query: 206 IY 207
+Y
Sbjct: 437 LY 438
>gi|426358879|ref|XP_004046717.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Gorilla gorilla gorilla]
Length = 407
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL----KVISGSNN--------- 64
P +I + +A F + ED+HEFL++ ++ + ++ L +V SN+
Sbjct: 16 PGHVIQPSQALAAGFHRGKQEDAHEFLMFAVDAMKKACLPGHKQVDHHSNDTTLIHQIFG 75
Query: 65 ----------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
L+++LDI S+ +AL Q E L +N YQC C
Sbjct: 76 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYQCGLCL 135
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K ++ V IL+LKRF+ + K++ VQ P L+ +M +
Sbjct: 136 QKAPASKTLTLHTSAKVLILVLKRFSDVTANKLAKNVQYPECLDMQPYMSQQNTGPLVYV 195
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S S HY G ++ D V AS + V AY + Y
Sbjct: 196 LYAVLVHAGWSCHSRHYLSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYDLFY 249
>gi|383856530|ref|XP_003703761.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Megachile
rotundata]
Length = 354
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/264 (25%), Positives = 109/264 (41%), Gaps = 58/264 (21%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLI------------------ 48
A Q + +I P+ I +L+ F+ Y +D+HEFL +LI
Sbjct: 78 ATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSKPAG 137
Query: 49 ---------------------EGIHRSYLKVIS-------GSNNLELSLDIYQLSSLDEA 80
+GI S + ++ + +L +D+ Q +S+
Sbjct: 138 GKCGAGDAGSPPEPTWVHEIFQGILTSETRCLNCETVSSKDEDFFDLQVDVDQNTSITHC 197
Query: 81 LGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----LKIS 135
L F E L DN ++C+ C EA K+ ++K P++ L LKRF Y+ +K+S
Sbjct: 198 LRCFSNTETLCSDNKFKCDHCSSYQEAQKRMRVKKLPMILALHLKRFKYVEQYNRHIKVS 257
Query: 136 CAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDD 189
V PL L ++ R +LV+ VIH GS GHY I S G + F DD
Sbjct: 258 HRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISI-VKSHGFWLLFDDD 316
Query: 190 RVQASNLQQVTNAYVVIYELLPSS 213
V + + + Y + ++ SS
Sbjct: 317 MVDKIDASTIEDFYGLTSDIQKSS 340
>gi|326502202|dbj|BAJ95164.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 408
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 83/172 (48%), Gaps = 25/172 (14%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+DI Q SSL L FF+ E L ++ + C+ C EA K+ I+K P + ++ L
Sbjct: 239 LDLSIDIEQNSSLTSCLKSFFSTEILNAEDKFFCDNCCSLQEAQKRMKIKKAPQILVIHL 298
Query: 125 KRFNYLCL-----KISCAVQVPLYLEFGKF---MHCRRNLVSAVIHHGSSSFSGHYNCIG 176
KRF ++ K+S V P+ L+ + C +L + V+H GS + GHY +
Sbjct: 299 KRFKFIEQLSQHKKLSYRVVYPMELKLSSASDDVDCAYSLFAVVVHLGSGANQGHY--VS 356
Query: 177 STSSGS-YHYFGD---DRVQASNLQ-----------QVTNAYVVIYELLPSS 213
SG + F D DR+Q S LQ + Y++ YE + S
Sbjct: 357 QIKSGDHWLSFDDDSVDRIQESTLQTFYGSSREYSGNTDHGYILFYESISKS 408
>gi|345490133|ref|XP_001599439.2| PREDICTED: hypothetical protein LOC100114408 [Nasonia vitripennis]
Length = 823
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 68/221 (30%), Positives = 100/221 (45%), Gaps = 25/221 (11%)
Query: 17 IPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV-------ISGSNNLELSL 69
IP+ + +K Y R EDS ++ + G RS L+ ++ +LSL
Sbjct: 605 IPDSYSDSMKAAESWKRYLRSEDS--TIVDVFVGQLRSSLRCTVCDHVSVTLDPFWDLSL 662
Query: 70 DIYQLSS---LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKR 126
I S L++ L F +E L D C KC + + TK F+I+K P + ++ LKR
Sbjct: 663 PIPSRSGTVRLNQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFAIQKFPKILVIHLKR 722
Query: 127 FNYLCL---KISCAVQVPLY-LEFGKF-----MHCRRNLVSAVIHHGSSSFSGHYNC-IG 176
F+ + K+S V PL LE F C NL V +H ++ SGHY
Sbjct: 723 FSPMERFRGKLSVLVDFPLTGLELSAFAAPRVQGCTYNLY-GVANHSGTTHSGHYTAYCK 781
Query: 177 STSSGSYHYFGDDRVQASNLQQV--TNAYVVIYELLPSSLH 215
SG +H + D RV + + V + AYV+ YE P S H
Sbjct: 782 HPYSGEWHEYNDSRVTPVSARSVVSSEAYVLFYEQQPHSSH 822
>gi|268573334|ref|XP_002641644.1| Hypothetical protein CBG09971 [Caenorhabditis briggsae]
Length = 415
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 80/174 (45%), Gaps = 22/174 (12%)
Query: 36 RPEDSHEFLLYLIEGIHRSYLKVIS-------GSNNLELSLDIYQLSSLDEALGQFFAKE 88
RPE + ++ + EGI + K +S N L+LS+D+ Q +S+ L F E
Sbjct: 181 RPEST--WIHEIFEGILTNETKCLSCDTKSCKDENFLDLSIDVEQNTSITHCLRVFSETE 238
Query: 89 YLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----LKISCAVQVPLY 143
L D Y CE C K EA K+ I+KPP + L LKRF Y+ K+S V PL
Sbjct: 239 TLCGDQKYYCETCSSKQEAQKRMRIKKPPQLLALHLKRFKYVDSLNRHTKLSYRVVFPLE 298
Query: 144 LEFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV 191
L +LV+ V+H G++ GHY I S S+ DD +
Sbjct: 299 LRLFNVSDDAEEADQIYDLVATVVHCGATPNRGHY--ITLVKSNSFWLVFDDDI 350
>gi|193210242|ref|NP_499162.2| Protein USP-46, isoform a [Caenorhabditis elegans]
gi|161784339|sp|P34547.3|UBPX_CAEEL RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase 46;
AltName: Full=Deubiquitinating enzyme; AltName:
Full=Ubiquitin thioesterase; AltName:
Full=Ubiquitin-specific-processing protease
gi|148589129|emb|CAB54286.2| Protein USP-46, isoform a [Caenorhabditis elegans]
Length = 426
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 26/180 (14%)
Query: 33 EYYRPEDSHEFLLYLIEGIHRSYLKVIS-------GSNNLELSLDIYQLSSLDEALGQFF 85
E+ D+ ++ + +GI + + +S + L+LS+D+ Q +S+ L F
Sbjct: 186 EFLNKSDTTTWIHEIFQGILTNETRCLSCETVSSKDEDFLDLSIDVEQNTSISHCLRVFS 245
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----LKISCAVQV 140
E L D Y CE C K EA K+ I+KPP + L LKRF ++ K+S V
Sbjct: 246 ETETLCGDQKYFCETCSSKQEAQKRMRIKKPPQLLALHLKRFKFVEPLNRHTKLSYRVVF 305
Query: 141 PLYL---------EFGKFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV 191
PL L E+G M+ +LV+ V+H G++ GHY I S S+ DD +
Sbjct: 306 PLELRLFNVSDDAEYGDRMY---DLVATVVHCGATPNRGHY--ITLVKSNSFWLVFDDDI 360
>gi|297798806|ref|XP_002867287.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
gi|297313123|gb|EFH43546.1| ubiquitin carboxyl-terminal hydrolase family protein [Arabidopsis
lyrata subsp. lyrata]
Length = 618
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 107/242 (44%), Gaps = 54/242 (22%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--------------- 62
P II++L I Y R ED+HEF+ Y I+ + L+ G
Sbjct: 232 PMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCLEEFGGEKIVPPRSQETTLIQY 291
Query: 63 -----------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQC 98
N ++L ++++ SL+E L QF A+E+L DN+Y+C
Sbjct: 292 IFGGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAVSLEECLDQFTAEEWLHGDNMYKC 351
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFN---YLCLKISCAVQVPLYLEFGKFMHCRRN 155
++C +A K+ +I + P + + LKR+ Y K++ + P L+ +M +
Sbjct: 352 DRCSDYVKACKRLTIWRAPNILTIALKRYQGGRY--GKLNKRISFPATLDLNPYMSEGGD 409
Query: 156 ------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
L + ++H ++SF GHY C G+++ D +++ L+ V AY++
Sbjct: 410 GSDVYKLYAVIVHLDMLNASFFGHYICYIKDFCGNWYRIDDSEIESVELEDVLSQRAYML 469
Query: 206 IY 207
+Y
Sbjct: 470 LY 471
>gi|334191679|ref|NP_001229258.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 5 [Homo
sapiens]
gi|187663984|sp|A8MUK1.2|U17L5_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
5; AltName: Full=Deubiquitinating enzyme 17-like protein
5; AltName: Full=Ubiquitin thioesterase 17-like protein
5; AltName: Full=Ubiquitin-specific-processing protease
17-like protein 5
Length = 530
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLAKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>gi|40804411|gb|AAR91701.1| deubiquitinating enzyme 3 [Homo sapiens]
gi|162317638|gb|AAI56291.1| Deubiquitinating enzyme 3 [synthetic construct]
gi|162319434|gb|AAI57074.1| Deubiquitinating enzyme 3 [synthetic construct]
Length = 530
Score = 70.5 bits (171), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 99/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKVI-------SGSNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GCWRSQIKCLHCHGIPDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + K++ VQ P L+ +M +
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>gi|119914980|ref|XP_001256113.1| PREDICTED: ubiquitin specific peptidase 17-like 2-like [Bos taurus]
Length = 533
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 19 ELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN-------------- 64
E+I + L+A F ++ ED+HEFL++ + + + L S +
Sbjct: 153 EVIRPRKDLLAG-FHRHQQEDAHEFLMFTLNAMQQGCLSASQPSGHASEDTTVIRQIFGG 211
Query: 65 ---------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGY 103
L++SLDI S+++AL + E L DN Y C C
Sbjct: 212 TWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDCGVCLR 271
Query: 104 KTEATKQFSIEKPPIVFILLLKRFNYLC-LKISCAVQVPLYLEFGKFMHCRRN------L 156
K ATK+ ++ V +L+LKRF + K + V+ P L+ + R+ L
Sbjct: 272 KVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEVRYPQCLDLQPYTSERKAGPLGYVL 331
Query: 157 VSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+ ++H G S GHY C +G ++ D +V A + +AYV+ Y
Sbjct: 332 YAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFY 384
>gi|307180288|gb|EFN68321.1| Ubiquitin carboxyl-terminal hydrolase 46 [Camponotus floridanus]
Length = 327
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 68/265 (25%), Positives = 109/265 (41%), Gaps = 59/265 (22%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLI------------------ 48
A Q + +I P+ I +L+ F+ Y +D+HEFL +LI
Sbjct: 50 ATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERTQNKPAG 109
Query: 49 ----------------------EGIHRSYLKVIS-------GSNNLELSLDIYQLSSLDE 79
+GI S + ++ + +L +D+ Q +S+
Sbjct: 110 GKCGAGDAAGSPPEPTWVHEIFQGILTSETRCLNCETVSSKDEDFFDLQVDVDQNTSITH 169
Query: 80 ALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----LKI 134
L F E L DN ++C+ C EA K+ ++K P++ L LKRF Y+ +K+
Sbjct: 170 CLRCFSNTETLCSDNKFKCDHCSSYQEAQKRMRVKKLPMILALHLKRFKYVEQYNRHIKV 229
Query: 135 SCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGD 188
S V PL L ++ R +LV+ VIH GS GHY I S G + F D
Sbjct: 230 SHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISI-VKSHGFWLLFDD 288
Query: 189 DRVQASNLQQVTNAYVVIYELLPSS 213
D V + + + Y + ++ SS
Sbjct: 289 DMVDKIDASTIEDFYGLTSDIQKSS 313
>gi|193210244|ref|NP_499163.2| Protein USP-46, isoform b [Caenorhabditis elegans]
gi|148589130|emb|CAB54287.2| Protein USP-46, isoform b [Caenorhabditis elegans]
Length = 414
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 26/180 (14%)
Query: 33 EYYRPEDSHEFLLYLIEGIHRSYLKVIS-------GSNNLELSLDIYQLSSLDEALGQFF 85
E+ D+ ++ + +GI + + +S + L+LS+D+ Q +S+ L F
Sbjct: 174 EFLNKSDTTTWIHEIFQGILTNETRCLSCETVSSKDEDFLDLSIDVEQNTSISHCLRVFS 233
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----LKISCAVQV 140
E L D Y CE C K EA K+ I+KPP + L LKRF ++ K+S V
Sbjct: 234 ETETLCGDQKYFCETCSSKQEAQKRMRIKKPPQLLALHLKRFKFVEPLNRHTKLSYRVVF 293
Query: 141 PLYL---------EFGKFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV 191
PL L E+G M+ +LV+ V+H G++ GHY I S S+ DD +
Sbjct: 294 PLELRLFNVSDDAEYGDRMY---DLVATVVHCGATPNRGHY--ITLVKSNSFWLVFDDDI 348
>gi|330822492|ref|XP_003291685.1| hypothetical protein DICPUDRAFT_6348 [Dictyostelium purpureum]
gi|325078121|gb|EGC31790.1| hypothetical protein DICPUDRAFT_6348 [Dictyostelium purpureum]
Length = 328
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 67/250 (26%), Positives = 109/250 (43%), Gaps = 47/250 (18%)
Query: 5 LAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH------------ 52
+ A +G +I P +I ++ +A F R EDSHEF ++I+ +
Sbjct: 77 IIASHQATGKSITPLVIAKNIEKVAPTFRIGRQEDSHEFFCFVIDSLQKVCLAKFPKGSI 136
Query: 53 --RSYLKVISGS-----------------------NNLELSLDIYQLSSLDEALGQFFAK 87
R + + GS ++L ++I Q +SL + L F
Sbjct: 137 SPRDSMTTVIGSIFGGYLRSQVKCTVCQYESNTFDEFMDLCVEINQANSLTKGLQNFVKP 196
Query: 88 EYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL---CLKISCAVQVPLYL 144
E L +N Y+C+KC +A K IE P V + +KRF++L K + +Q L
Sbjct: 197 EILDGENGYKCKKCKKLVKAEKSLQIEISPPVLTVQIKRFSFLNSYGGKDNKHIQFCQTL 256
Query: 145 EFGKFM-----HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV 199
+ +M H +L S ++H G S+ SGHY C S+G ++ D V +LQ V
Sbjct: 257 DLSPYMTQTNDHSIYDLNSVLVHLGDSTNSGHYYCYVKGSNGVWYKMDDSMVSQVSLQTV 316
Query: 200 --TNAYVVIY 207
+ AY++ Y
Sbjct: 317 LRSKAYMLFY 326
>gi|413923519|gb|AFW63451.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 591
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 62/245 (25%), Positives = 96/245 (39%), Gaps = 50/245 (20%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN------- 64
SGS I P + L+ ++ F + ED+HEFL L++ +H+ L +S
Sbjct: 105 SGSVIAPAKFRDNLRKLSSDFWPGQQEDAHEFLRCLLDNLHKCTLDPMSKGKGSSFDEES 164
Query: 65 -----------------------------LELSLDIYQLSSLDEALGQFFAKEYL-VRDN 94
L+LSL+I Q+ L +AL F E + +N
Sbjct: 165 IVNEIFGGQLKSHLSCCECGHSSETFEPFLDLSLEIDQVDHLVDALQSFTKVEQIGDSEN 224
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL---CLKISCAVQVPLYLEFGKFMH 151
CE C + KQ ++ + P V LKRF L KI V PL ++ F H
Sbjct: 225 KLTCESCNAQVSKNKQLTLHRAPDVIAFHLKRFTTLDNSVEKIDKHVVYPLEVDLKPF-H 283
Query: 152 CRRNLVS-------AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--A 202
+ V V+ H GHY C +S ++++ D +V + N A
Sbjct: 284 SNPDTVGGLKYDLYGVVEHSGLPNYGHYTCTIRSSPSTWYFMNDSKVDSCTDSSALNQEA 343
Query: 203 YVVIY 207
Y++ Y
Sbjct: 344 YILFY 348
>gi|340721026|ref|XP_003398928.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Bombus
terrestris]
Length = 541
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 108/269 (40%), Gaps = 74/269 (27%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS--------- 60
+G AI PE + + + F Y+ +D+HEFL Y+++ +H L+++
Sbjct: 265 GSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYMLDRLHTELLQLLPRLGHEPLGL 324
Query: 61 -GSNNL-----------------------------ELSLDI-----------YQLSSLDE 79
G ++ +LSLDI ++ SL
Sbjct: 325 RGKQSIVTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTY 384
Query: 80 ALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----LKIS 135
+L +FF E L LY C+ C K +TK+F I + P V L +KRF + C K+
Sbjct: 385 SLTRFFKVEELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRW-CNSYRSKVD 443
Query: 136 CAVQVPLY-LEFGKFMHCRR--------------NLVSAVIHHGSSSFSGHYNCIGSTSS 180
V P+ L+ F R +L + ++HHGS + +GHY +
Sbjct: 444 TQVDFPMKSLDMSAFT-VRGVSGTKLGASNSHLYDLAAVIVHHGSGAGTGHYTAF-AVHD 501
Query: 181 GSYHYFGDDRVQASNLQQVTNA--YVVIY 207
G + +F D V+ + V Y++ Y
Sbjct: 502 GQWFHFNDSSVRPATTDAVAKCKPYILFY 530
>gi|119929526|ref|XP_001251337.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Bos taurus]
Length = 533
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 19 ELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN-------------- 64
E+I + L+A F ++ ED+HEFL++ + + + L S +
Sbjct: 153 EVIRPRKDLLAG-FHRHQQEDAHEFLMFTLNAMQQGCLSASQPSGHASEDTTVIRQIFGG 211
Query: 65 ---------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGY 103
L++SLDI S+++AL + E L DN Y C C
Sbjct: 212 TWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDCGVCLR 271
Query: 104 KTEATKQFSIEKPPIVFILLLKRFNYLC-LKISCAVQVPLYLEFGKFMHCRRN------L 156
K ATK+ ++ V +L+LKRF + K + V+ P L+ + R+ L
Sbjct: 272 KVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEVRYPQCLDLQPYTSERKAGPLGYVL 331
Query: 157 VSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+ ++H G S GHY C +G ++ D +V A + +AYV+ Y
Sbjct: 332 YAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFY 384
>gi|449061956|sp|C9J2P7.1|U17LF_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
15
Length = 530
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI VQ P L+ +M +
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIDKNVQYPECLDMKLYMSQTNSGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>gi|254564677|ref|XP_002489449.1| Ubiquitin-specific protease that deubiquitinates ubiquitin-protein
moieties [Komagataella pastoris GS115]
gi|238029245|emb|CAY67168.1| Ubiquitin-specific protease that deubiquitinates ubiquitin-protein
moieties [Komagataella pastoris GS115]
gi|328349877|emb|CCA36277.1| ubiquitin carboxyl-terminal hydrolase 10 [Komagataella pastoris CBS
7435]
Length = 679
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 77/172 (44%), Gaps = 23/172 (13%)
Query: 76 SLDEALGQFFAKEYLVRDNL----YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY-- 129
S++ ++ FF+ E + D Y CEKC +T A K +I+ P I+ LKRF Y
Sbjct: 500 SIERSIKDFFSSELIKTDKKDKTGYVCEKCNKRTNAVKVSTIDTAPESLIIHLKRFRYDG 559
Query: 130 ---LCLKISCAVQVPLYLEFGKFMH----CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGS 182
K+ V P LE ++ R L+S ++H G S SGHY C +
Sbjct: 560 NSNSSTKVKTGVSYPETLEMTEYTTTNFPARYKLLSVILHEGRSVSSGHYICYSRQPDNT 619
Query: 183 YHYFGDDRVQASNLQQV---TNAYVVIYE-------LLPSSLHHLNSSLHSS 224
+ + D+ V +Q +AYV++Y+ L PSS L S SS
Sbjct: 620 WASYDDEYVNTMPEKQALKDPSAYVLVYQRITHKSILEPSSATSLKRSKPSS 671
>gi|350404719|ref|XP_003487196.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Bombus
impatiens]
Length = 541
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 65/269 (24%), Positives = 108/269 (40%), Gaps = 74/269 (27%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS--------- 60
+G AI PE + + + F Y+ +D+HEFL Y+++ +H L+++
Sbjct: 265 GSNGQAISPECLFLVIWKVVPRFRGYQQQDAHEFLTYMLDRLHTELLQLLPRLGHEPLGL 324
Query: 61 -GSNNL-----------------------------ELSLDI-----------YQLSSLDE 79
G ++ +LSLDI ++ SL
Sbjct: 325 RGKQSIVTAVFGGTLLSVVHCMNCRTDSKTHEPFQDLSLDIPDRLQRRTKEQEEVCSLTY 384
Query: 80 ALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----LKIS 135
+L +FF E L LY C+ C K +TK+F I + P V L +KRF + C K+
Sbjct: 385 SLTRFFKVEELADSELYFCDNCMGKQRSTKRFWIHRLPNVLCLHIKRFRW-CNSYRSKVD 443
Query: 136 CAVQVPLY-LEFGKFMHCRR--------------NLVSAVIHHGSSSFSGHYNCIGSTSS 180
V P+ L+ F R +L + ++HHGS + +GHY +
Sbjct: 444 TQVDFPMKSLDMSAFT-VRGVSGTKLGASNSHLYDLAAVIVHHGSGAGTGHYTAF-AVHD 501
Query: 181 GSYHYFGDDRVQASNLQQVTNA--YVVIY 207
G + +F D V+ + V Y++ Y
Sbjct: 502 GQWFHFNDSSVRPATTDAVAKCKPYILFY 530
>gi|426259087|ref|XP_004023133.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Ovis aries]
Length = 533
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 59/233 (25%), Positives = 98/233 (42%), Gaps = 45/233 (19%)
Query: 19 ELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN-------------- 64
E+I L+A F ++ ED+HEFL++ + G+ + L S +
Sbjct: 153 EVIRPHRDLLAG-FHRHQQEDAHEFLMFTLSGMQQGCLSASQPSGHASEDTSVVRQIFGG 211
Query: 65 ---------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGY 103
L++SLDI S+++AL + E L +N Y C C
Sbjct: 212 TWRSQIQCLHCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLEAENAYDCGVCLR 271
Query: 104 KTEATKQFSIEKPPIVFILLLKRFNYLC-LKISCAVQVPLYLEFGKFMHCRRN------L 156
K ATK+ ++ V +L+LKRF L K + V+ P L+ + R+ L
Sbjct: 272 KVPATKRLTLHSTSQVLVLVLKRFTQLSGAKRAQEVRYPQCLDVQPYTSERKAGPLGYVL 331
Query: 157 VSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+ ++H G S GHY C +G ++ D +V A + +AY++ Y
Sbjct: 332 YAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYILFY 384
>gi|378925632|ref|NP_001243782.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 12 [Homo
sapiens]
gi|449061964|sp|C9JPN9.1|UL17C_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
12
Length = 530
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M
Sbjct: 259 QRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>gi|109514144|ref|XP_001067099.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 isoform 1
[Rattus norvegicus]
gi|392352299|ref|XP_003751173.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Rattus
norvegicus]
gi|392354053|ref|XP_577055.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Rattus
norvegicus]
Length = 363
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 108/268 (40%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLK--- 57
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 88 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 147
Query: 58 ------VISGSNN-----------------------------------LELSLDIYQLSS 76
V S NN L+LS+D+ Q +S
Sbjct: 148 RLRNGDVDSEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 207
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 208 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 267
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 268 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 326
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISKNS 354
>gi|414885081|tpg|DAA61095.1| TPA: hypothetical protein ZEAMMB73_937400 [Zea mays]
Length = 920
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 11/137 (8%)
Query: 66 ELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLK 125
EL L+I L++L+E+L ++F++E L +N Y CE C + +AT+ + P V LK
Sbjct: 245 ELELNIKGLNNLEESLNEYFSEEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLK 304
Query: 126 RFNYLC-----LKISCAVQVPLYLEFGKFM-----HCRRNLVSAVIHHGSSSFSGHYNC- 174
R+ +L KIS P L+ GK + C L + +IH G+ + SGHY
Sbjct: 305 RYVFLPKTTTKKKISSTFSFPGQLDLGKRLSEPSSSCTYALSAILIHKGTGANSGHYVAH 364
Query: 175 IGSTSSGSYHYFGDDRV 191
I S+G + F D+ V
Sbjct: 365 IKDESNGQWWEFDDETV 381
>gi|414885082|tpg|DAA61096.1| TPA: hypothetical protein ZEAMMB73_937400 [Zea mays]
gi|414885083|tpg|DAA61097.1| TPA: hypothetical protein ZEAMMB73_937400 [Zea mays]
Length = 1075
Score = 70.1 bits (170), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 71/137 (51%), Gaps = 11/137 (8%)
Query: 66 ELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLK 125
EL L+I L++L+E+L ++F++E L +N Y CE C + +AT+ + P V LK
Sbjct: 245 ELELNIKGLNNLEESLNEYFSEEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLK 304
Query: 126 RFNYLC-----LKISCAVQVPLYLEFGKFM-----HCRRNLVSAVIHHGSSSFSGHYNC- 174
R+ +L KIS P L+ GK + C L + +IH G+ + SGHY
Sbjct: 305 RYVFLPKTTTKKKISSTFSFPGQLDLGKRLSEPSSSCTYALSAILIHKGTGANSGHYVAH 364
Query: 175 IGSTSSGSYHYFGDDRV 191
I S+G + F D+ V
Sbjct: 365 IKDESNGQWWEFDDETV 381
>gi|359496742|ref|XP_003635320.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Vitis
vinifera]
Length = 860
Score = 70.1 bits (170), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 62/244 (25%), Positives = 104/244 (42%), Gaps = 48/244 (19%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS---------- 60
E S + P I+++++ I H + R ED+HEFL Y ++ + LK
Sbjct: 453 EGKSPLSPMGILSQIQRIGSHLGHGREEDAHEFLRYAVDTMQSVCLKDTGVVGPLAEDTT 512
Query: 61 ---------------------GSNNLELSLDIY-----QLSSLDEALGQFFAKEYLVRDN 94
S E +D+ + +L+EAL QF A E L +N
Sbjct: 513 LVGLTFGGYLLSKIKCMKCRGKSERCERMMDLTVEIDGDIGTLEEALAQFTATEILDGEN 572
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCR 153
YQC +C +A K+ + + P + ++LKRF K++ +V+ P L +M
Sbjct: 573 KYQCGRCRSYEKAKKKLMVLEAPNILTIVLKRFQSSNFGKLNKSVRFPETLNMTPYMSGT 632
Query: 154 RN------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAY 203
+ L + V+H +++FSGHY C + G + D V L +V AY
Sbjct: 633 DDRYPVYSLYAVVVHLDIMNAAFSGHYVCF-VKNLGDWFRIDDSTVTPVELDRVLLEGAY 691
Query: 204 VVIY 207
+++Y
Sbjct: 692 MLLY 695
>gi|37778800|gb|AAO38845.1| deubiquitinating enzyme 3 [Homo sapiens]
Length = 530
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSIISVLSQQAYVLFY 372
>gi|302774793|ref|XP_002970813.1| hypothetical protein SELMODRAFT_171601 [Selaginella moellendorffii]
gi|300161524|gb|EFJ28139.1| hypothetical protein SELMODRAFT_171601 [Selaginella moellendorffii]
Length = 419
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 60/241 (24%), Positives = 106/241 (43%), Gaps = 50/241 (20%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--------------- 62
P I+++L+ I + Y R ED+HEF+ ++ + + L G
Sbjct: 178 PIKILSRLRSIGNSLGYGRQEDAHEFMRLAVDCMQKICLDEAGGETTLDARTQETTLIQH 237
Query: 63 -----------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQC 98
N L+LS+ I + SL++AL QF + E+L DN Y+C
Sbjct: 238 IFGGYLQSQVVCCQCQQRSNLYENMLDLSVGIQGNVESLEDALKQFTSPEWLDGDNKYRC 297
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN-- 155
++C A K+ S+ + P + + LKRF KI+ V P L+ +M +
Sbjct: 298 DRCNAYVRAKKRLSVHEAPNILTIALKRFQGGKFGKINKKVTFPEELDMVPYMSGTVDTP 357
Query: 156 ----LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
L + V+H ++S+ GHY C +G++ D +V+ + +V + AY+++Y
Sbjct: 358 PAYKLYAVVVHVDMLNASYFGHYVCYVRAGNGAWFKVDDSKVKEVDQIRVMSQKAYMLLY 417
Query: 208 E 208
Sbjct: 418 R 418
>gi|379643059|ref|NP_001243823.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 15 [Homo
sapiens]
Length = 559
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI VQ P L+ +M +
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIDKNVQYPECLDMKLYMSQTNSGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>gi|432863250|ref|XP_004070044.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Oryzias
latipes]
Length = 508
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 76/288 (26%), Positives = 113/288 (39%), Gaps = 83/288 (28%)
Query: 2 RKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLI------------- 48
RKTL + + +A P+ + + I F Y+ +D+HEF+ YL+
Sbjct: 148 RKTLCSLWQGNQTAFSPDSLFYAIWKIMPSFRGYQQQDAHEFMRYLLDHLHRELQYSRNG 207
Query: 49 --------EGIHRSYLK--------------------------VISGSNN------LELS 68
+G+ S + +I G+ + L+LS
Sbjct: 208 ASHPVSPQDGVRLSSAEGKCCTNGAPSVVTSIFGGLLQNEVNCLICGTESRKFDPFLDLS 267
Query: 69 LDI--------------YQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI +L + L F E L LY C KC + ++TK+F I
Sbjct: 268 LDIPSQFRQKRSKDQEPSPTCTLRDCLYSFTDLEELDETELYYCHKCKKRQKSTKKFWIH 327
Query: 115 KPPIVFILLLKRFNYLCL---KISCAVQVPLY-LEFGKFM---------HCRRNLVSAVI 161
P V L LKRF++ KI V+ PL L+ ++ C +LV+ V+
Sbjct: 328 NLPKVLCLHLKRFHWTAFLRNKIDTYVEFPLKGLDMRGYLLEPENSLPGSCLYDLVAVVV 387
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY GS + YH F D V +N V AY++ Y
Sbjct: 388 HHGSGVGSGHYTAYGSHEACWYH-FNDSTVTLTNEDTVRKAKAYILFY 434
>gi|379030606|ref|NP_001243791.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 21 [Homo
sapiens]
gi|449061961|sp|D6R901.1|U17LL_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
21
Length = 530
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M
Sbjct: 259 QRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>gi|119929524|ref|XP_001251224.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 490
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 45/233 (19%)
Query: 19 ELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN-------------- 64
E+I + L+A F ++ ED+HEFL++ + + + L S +
Sbjct: 110 EVIRPRKDLLAG-FHRHQQEDAHEFLMFTLNAMQQGCLSASQPSGHASEDTTVIRQIFGG 168
Query: 65 ---------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGY 103
L++SLDI S+++AL + E L DN Y C C
Sbjct: 169 TWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDCGVCLR 228
Query: 104 KTEATKQFSIEKPPIVFILLLKRFNYLC-LKISCAVQVPLYLEFGKFMHCRRN------L 156
K ATK+ ++ V +L+LKRF + K + + P L+ + R+ L
Sbjct: 229 KVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEARYPQCLDLQPYTSERKAGPLGYVL 288
Query: 157 VSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+ ++H G S GHY C +G ++ D +V A + +AYV+ Y
Sbjct: 289 YAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFY 341
>gi|332244569|ref|XP_003271445.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
6-like [Nomascus leucogenys]
Length = 399
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 99/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRS----YLKVISGSNN--------- 64
P +I + +A F + ED+HEFL++ ++ + ++ Y +V S +
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMRKACLPGYKQVDPHSKDTTLIHQIFG 198
Query: 65 ----------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCQGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K ++ V IL+LKRF+ + K++ VQ P L+ +M +
Sbjct: 259 QKAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D+V AS + V AY + Y
Sbjct: 319 LYAVLVHAGWSGHNGHYFSYVKAQEGQWYKMDGDQVTASGITSVLSQQAYDLFY 372
>gi|153792150|ref|NP_958804.2| ubiquitin carboxyl-terminal hydrolase 17 [Homo sapiens]
gi|187663988|sp|Q6R6M4.2|U17L2_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17;
Short=USP17; AltName: Full=Deubiquitinating enzyme
17-like protein 2; AltName: Full=Deubiquitinating
protein 3; Short=DUB-3; AltName: Full=Ubiquitin
carboxyl-terminal hydrolase 17-like protein 2; AltName:
Full=Ubiquitin thioesterase 17-like protein 2; AltName:
Full=Ubiquitin-specific-processing protease 17-like
protein 2
Length = 530
Score = 69.7 bits (169), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + K++ VQ P L+ +M +
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S GHY G ++ D +V A ++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHDGHYFSYVKAQEGQWYKMDDAKVTACSITSVLSQQAYVLFY 372
>gi|348540583|ref|XP_003457767.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform 1
[Oreochromis niloticus]
Length = 371
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 69/269 (25%), Positives = 108/269 (40%), Gaps = 63/269 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------------- 49
A Q + I P+ I++L+ F+ Y +D+HEFL YL+
Sbjct: 92 ATQKKKVGVIPPKKFISRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEEKSQERQQN 151
Query: 50 --------------------GIHRSYLKVISGSNN--------------LELSLDIYQLS 75
+H + ++ L+LS+D+ Q +
Sbjct: 152 GKLVQNGGGEGEGGKETQQTWVHEIFQGTLTNETRCLNCEAVSSKDEDFLDLSVDVEQNT 211
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC---- 131
S+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 212 SITHCLRGFSNTETLCSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHLKRFKYMDQLHR 271
Query: 132 -LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
K+S V PL L G + R +LV+ V+H GS GHY I S G +
Sbjct: 272 YTKLSYRVVFPLELRLFNTSGDATNPDRLYDLVAVVVHCGSGPNRGHYITI-VKSHGFWL 330
Query: 185 YFGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 331 LFDDDIVEKIDAQAIEEFYGLTSDISKNS 359
>gi|50306927|ref|XP_453439.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642573|emb|CAH00535.1| KLLA0D08459p [Kluyveromyces lactis]
Length = 750
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 86/177 (48%), Gaps = 21/177 (11%)
Query: 59 ISGSNNLELSLDIYQLS----SLDEALGQFFAKEYLVR-DNL--YQCEKCGYKTEATKQF 111
+ N+++ S+D Q S S+++++ FF E + R DN Y CEKC T A K
Sbjct: 527 VGQDNSIDNSVDQQQSSKRRFSIEKSIRDFFNPELIKRVDNKEGYTCEKCKKVTNALKSN 586
Query: 112 SIEKPPIVFILLLKRFNY---LCLKISCAVQVPLYLEFGKFMH-------CRRNLVSAVI 161
I + P ++ LK+F + K+ AV P++L+ ++ H R L+S V+
Sbjct: 587 KIIRAPETLVVHLKKFRFNGTSSSKMKQAVSYPMFLDLTEYCHESISSLPVRYQLISVVV 646
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDD---RVQASNLQQVTNAYVVIY-ELLPSSL 214
H G S SGHY GS+ + D+ ++ L + NAY ++Y L P S+
Sbjct: 647 HEGRSLSSGHYIAHCKQPDGSWATYDDEYINKISEKQLLKEPNAYFLVYTRLTPKSV 703
>gi|426358757|ref|XP_004046661.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Gorilla
gorilla gorilla]
Length = 530
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 99/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKVIS--GSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K + G ++ L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSEIKCLHCHGMSDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCALCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K ++ V IL+LKRF+ + K++ VQ P L+ +M +
Sbjct: 259 QKAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS + AYV+ Y
Sbjct: 319 LYAVLVHTGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSALSQQAYVLFY 372
>gi|262205503|ref|NP_001160048.1| ubiquitin carboxyl-terminal hydrolase 12 [Rattus norvegicus]
gi|262036776|emb|CBH26010.1| ubiquitin specific protease 12 [Rattus norvegicus]
Length = 370
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 108/268 (40%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLK--- 57
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 92 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 151
Query: 58 ------VISGSNN-----------------------------------LELSLDIYQLSS 76
V S NN L+LS+D+ Q +S
Sbjct: 152 RLRNGDVDSEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 211
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 212 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 271
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 272 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 330
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 331 FDDDIVEKIDAQAIEEFYGLTSDISKNS 358
>gi|321249377|ref|XP_003191439.1| hypothetical protein CGB_A4490C [Cryptococcus gattii WM276]
gi|317457906|gb|ADV19652.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 643
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 65/239 (27%), Positives = 95/239 (39%), Gaps = 56/239 (23%)
Query: 25 LKLIAHHFEYYRPEDSHEFLLYLIEGI-----------------HRSYLKVISGS----- 62
L I F R ED+HEF ++ + + H S++ + G
Sbjct: 220 LSQIKKGFSKNRQEDTHEFFRFVTDALQNTALAKLPKDTPEKIKHTSWVYRVWGGRVRSR 279
Query: 63 ------NN--------LELSLDIYQLS--SLDEALGQFFAKEYLVRDNLYQCEKCGYKTE 106
NN L+LSLD+ + S+ L F ++ L DN Y CEKC K
Sbjct: 280 VVCSRCNNPSDTFDSFLDLSLDVNKQGKKSVLGMLAGFTKEDKLEGDNKYHCEKCKCKAN 339
Query: 107 ATKQFSIEKPPIVFILLLKRF--NY-------LCLKISCAVQVPLYLEFGKFM------H 151
ATK F +++ P V L LKRF NY K + ++ L+ +M
Sbjct: 340 ATKSFKVDQAPPVLTLHLKRFSVNYNPYSGRARAEKFNQPIKFEQNLDMAPYMVDPKSPG 399
Query: 152 CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN---AYVVIY 207
+ L H G+ GHY + SG + + DD V L+QV N AY++ Y
Sbjct: 400 SKYRLFGVTCHRGTELRFGHYTSYVRSPSGQWFHADDDDVSPVQLEQVLNDKTAYLLSY 458
>gi|242096572|ref|XP_002438776.1| hypothetical protein SORBIDRAFT_10g026010 [Sorghum bicolor]
gi|241916999|gb|EER90143.1| hypothetical protein SORBIDRAFT_10g026010 [Sorghum bicolor]
Length = 979
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/239 (24%), Positives = 102/239 (42%), Gaps = 49/239 (20%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISG---------------- 61
P I++ L I + + R ED+HEF+ + I+ + + L G
Sbjct: 252 PTNILSHLPNIGGNLGFGRQEDAHEFMRFAIDKMQSACLDEYGGEKAVDLSTQETTIIQH 311
Query: 62 ----------------------SNNLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQC 98
N ++L+++I SL++ L QF A E+L DN Y+C
Sbjct: 312 IFGGRLQSQVQCTACGMVSNRYDNMMDLTVEIQGDAESLEKCLDQFTAIEWLDGDNKYKC 371
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRR--- 154
+ C +A K S+ + P + + LKRF K++ V P+ L+ + C
Sbjct: 372 DGCNDYVKARKHLSVHQAPNILTITLKRFQSGRFGKLNKRVTFPMELDLTPYTSCTDGSD 431
Query: 155 --NLVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+L + V+H ++SF GHY C G ++ D +V + ++V AY+++Y
Sbjct: 432 LYDLYAVVVHLDMLNASFFGHYICYIKGYQGRWYKIDDCKVMVVDEEEVHAQGAYMLLY 490
>gi|426358871|ref|XP_004046713.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Gorilla gorilla gorilla]
Length = 355
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+++LDI S+ +AL Q E L +N YQC C K A+K ++ V IL+L
Sbjct: 46 LDIALDIQAAQSVKQALEQLVKPEELNGENAYQCGLCLQKAPASKTLTLHTSAKVLILVL 105
Query: 125 KRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGS 177
KRF+ + K++ VQ P L+ +M + L + ++H G S SGHY
Sbjct: 106 KRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGWSCHSGHYLSYVK 165
Query: 178 TSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
G ++ D V AS + V AYV+ Y
Sbjct: 166 AQEGQWYKMDDAEVTASGITSVLSQQAYVLFY 197
>gi|426236775|ref|XP_004012342.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Ovis aries]
Length = 486
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 72/263 (27%), Positives = 105/263 (39%), Gaps = 61/263 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLKV-- 58
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 209 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 268
Query: 59 ------ISGSNN-----------------------------------LELSLDIYQLSSL 77
I NN L+LS+D+ Q +S+
Sbjct: 269 RLPNGNIDSENNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSI 328
Query: 78 DEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----L 132
L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 329 THCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT 388
Query: 133 KISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYF 186
K+S V PL L G + R +LV+ V+H GS GHY I S + F
Sbjct: 389 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLLF 447
Query: 187 GDDRVQASNLQQVTNAYVVIYEL 209
DD V+ + Q + Y + ++
Sbjct: 448 DDDIVEKIDAQAIEEFYGLTSDI 470
>gi|149034864|gb|EDL89584.1| rCG42642 [Rattus norvegicus]
Length = 364
Score = 69.7 bits (169), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 74/268 (27%), Positives = 108/268 (40%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLK--- 57
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 86 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 145
Query: 58 ------VISGSNN-----------------------------------LELSLDIYQLSS 76
V S NN L+LS+D+ Q +S
Sbjct: 146 RLRNGDVDSEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 205
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 206 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 265
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 266 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 324
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 325 FDDDIVEKIDAQAIEEFYGLTSDISKNS 352
>gi|345310501|ref|XP_001515746.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 46-like [Ornithorhynchus anatinus]
Length = 347
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 107/268 (39%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------------- 49
A Q + I P+ I++L+ F+ Y +D+HEFL YL+
Sbjct: 69 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKPNG 128
Query: 50 -------------------GIHRSYLKVISGSNN--------------LELSLDIYQLSS 76
+H + ++ L+LS+D+ Q +S
Sbjct: 129 KLRNGHLSEAGENDKSEPTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 188
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 189 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 248
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 249 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 307
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 308 FDDDIVEKIDAQAIEEFYGLTSDISKNS 335
>gi|395520835|ref|XP_003764528.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Sarcophilus
harrisii]
Length = 599
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 109/268 (40%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLK--- 57
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 321 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 380
Query: 58 ------VISGSNN-----------------------------------LELSLDIYQLSS 76
+ S +NN L+LS+D+ Q +S
Sbjct: 381 RLPNGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 440
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 441 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 500
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 501 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 559
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 560 FDDDIVEKIDAQAIEEFYGLTSDISKNS 587
>gi|345779600|ref|XP_849650.2| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 46 isoform 2 [Canis lupus familiaris]
Length = 389
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 108/268 (40%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 111 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 170
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L LS+D+ Q +S
Sbjct: 171 KLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLALSVDVEQNTS 230
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 231 XTHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 290
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 291 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 349
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 350 FDDDIVEKIDAQAIEEFYGLTSDISKNS 377
>gi|308501535|ref|XP_003112952.1| CRE-USP-46 protein [Caenorhabditis remanei]
gi|308265253|gb|EFP09206.1| CRE-USP-46 protein [Caenorhabditis remanei]
Length = 439
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 70/143 (48%), Gaps = 19/143 (13%)
Query: 63 NNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFIL 122
N L+LS+D+ Q +S+ L F E L D Y CE C K EA K+ I+KPP + L
Sbjct: 236 NFLDLSIDVEQNTSITHCLRVFSETETLCGDQKYFCETCSSKQEAQKRMRIKKPPQLLAL 295
Query: 123 LLKRFNYLC-----LKISCAVQVPLYL---------EFGKFMHCRRNLVSAVIHHGSSSF 168
LKRF Y+ K+S V PL L E G M+ +LV+ V+H G++
Sbjct: 296 HLKRFKYVDSLNRHTKLSYRVVFPLELRLFNVSDDAEHGDRMY---DLVATVVHCGATPN 352
Query: 169 SGHYNCIGSTSSGSYHYFGDDRV 191
GHY I S S+ DD +
Sbjct: 353 RGHY--ITLVKSNSFWLVFDDDI 373
>gi|126327583|ref|XP_001376012.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Monodelphis
domestica]
Length = 376
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 109/268 (40%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLK--- 57
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 98 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 157
Query: 58 ------VISGSNN-----------------------------------LELSLDIYQLSS 76
+ S +NN L+LS+D+ Q +S
Sbjct: 158 RLPNGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 217
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 218 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 277
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 278 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 336
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 337 FDDDIVEKIDAQAIEEFYGLTSDISKNS 364
>gi|326914260|ref|XP_003203444.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Meleagris
gallopavo]
Length = 359
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 107/267 (40%), Gaps = 61/267 (22%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLKV-- 58
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 82 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 141
Query: 59 ------ISGSNN-----------------------------------LELSLDIYQLSSL 77
I NN L+LS+D+ Q +S+
Sbjct: 142 RLPNGNIDNENNSPPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSI 201
Query: 78 DEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----L 132
L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 202 THCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT 261
Query: 133 KISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYF 186
K+S V PL L G + R +LV+ V+H GS GHY I S + F
Sbjct: 262 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLLF 320
Query: 187 GDDRVQASNLQQVTNAYVVIYELLPSS 213
DD V+ + Q + Y + ++ +S
Sbjct: 321 DDDIVEKIDAQAIEEFYGLTSDISKNS 347
>gi|119922836|ref|XP_001254468.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Bos taurus]
Length = 691
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 45/233 (19%)
Query: 19 ELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN-------------- 64
E+I + L+A F ++ ED+HEFL++ + + + L S +
Sbjct: 167 EVIRPRKDLLAG-FHRHQQEDAHEFLMFTLNAMQQGCLSASQPSGHASEDTTVIRQIFGG 225
Query: 65 ---------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGY 103
L++SLDI S+++AL + E L DN Y C C
Sbjct: 226 TWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDCGVCLR 285
Query: 104 KTEATKQFSIEKPPIVFILLLKRFNYLC-LKISCAVQVPLYLEFGKFMHCRRN------L 156
K ATK+ ++ V +L+LKRF + K + + P L+ + R+ L
Sbjct: 286 KVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEARYPQCLDLQPYTSERKAGPLGYVL 345
Query: 157 VSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+ ++H G S GHY C +G ++ D +V A + +AYV+ Y
Sbjct: 346 YAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFY 398
>gi|363729307|ref|XP_425636.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Gallus gallus]
Length = 354
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 107/267 (40%), Gaps = 61/267 (22%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLKV-- 58
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 77 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 136
Query: 59 ------ISGSNN-----------------------------------LELSLDIYQLSSL 77
I NN L+LS+D+ Q +S+
Sbjct: 137 RLPNGNIDNENNSPPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSI 196
Query: 78 DEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----L 132
L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 197 THCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT 256
Query: 133 KISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYF 186
K+S V PL L G + R +LV+ V+H GS GHY I S + F
Sbjct: 257 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLLF 315
Query: 187 GDDRVQASNLQQVTNAYVVIYELLPSS 213
DD V+ + Q + Y + ++ +S
Sbjct: 316 DDDIVEKIDAQAIEEFYGLTSDISKNS 342
>gi|354468571|ref|XP_003496726.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Cricetulus griseus]
Length = 450
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 108/268 (40%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLK--- 57
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 172 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 231
Query: 58 ------VISGSNN-----------------------------------LELSLDIYQLSS 76
V + NN L+LS+D+ Q +S
Sbjct: 232 RLRNGDVDTEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 291
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 292 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 351
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 352 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 410
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 411 FDDDIVEKIDAQAIEEFYGLTSDISKNS 438
>gi|348504876|ref|XP_003439987.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Oreochromis niloticus]
Length = 369
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q +S+ L F E L + Y CE C K EA K+ ++K P++ L L
Sbjct: 199 LDLSVDVEQNTSITHCLRDFSNTETLCSEYKYYCETCCSKQEAQKRMRVKKLPMILALHL 258
Query: 125 KRFNYL-----CLKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L G ++ R +LV+ V+H GS GHY
Sbjct: 259 KRFKYMEQLHRYTKLSYRVVFPLELRLFNTSGDAVNLDRMYDLVAVVVHCGSGPNRGHYI 318
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
I S G + F DD V+ + Q + Y + ++ +S
Sbjct: 319 TI-VKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNS 357
>gi|344284611|ref|XP_003414059.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Loxodonta
africana]
Length = 368
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 109/268 (40%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLK--- 57
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 90 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 149
Query: 58 ------VISGSNN-----------------------------------LELSLDIYQLSS 76
+ S +NN L+LS+D+ Q +S
Sbjct: 150 RLPNGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 209
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 210 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 269
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 270 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 328
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 329 FDDDIVEKIDAQAIEEFYGLTSDISKNS 356
>gi|148231175|ref|NP_001091528.1| ubiquitin carboxyl-terminal hydrolase 12 [Bos taurus]
gi|251765091|sp|A5D9H7.1|UBP12_BOVIN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName:
Full=Ubiquitin-specific-processing protease 12
gi|146231922|gb|ABQ13036.1| ubiquitin-specific protease 12-like 1 [Bos taurus]
gi|296481741|tpg|DAA23856.1| TPA: ubiquitin carboxyl-terminal hydrolase 12 [Bos taurus]
Length = 369
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 107/267 (40%), Gaps = 61/267 (22%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLKV-- 58
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 92 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 151
Query: 59 ------ISGSNN-----------------------------------LELSLDIYQLSSL 77
I NN L+LS+D+ Q +S+
Sbjct: 152 RLPNGNIDSENNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSI 211
Query: 78 DEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----L 132
L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 212 THCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT 271
Query: 133 KISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYF 186
K+S V PL L G + R +LV+ V+H GS GHY I S + F
Sbjct: 272 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLLF 330
Query: 187 GDDRVQASNLQQVTNAYVVIYELLPSS 213
DD V+ + Q + Y + ++ +S
Sbjct: 331 DDDIVEKIDAQAIEEFYGLTSDISKNS 357
>gi|301777688|ref|XP_002924262.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like, partial
[Ailuropoda melanoleuca]
Length = 354
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 109/268 (40%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLK--- 57
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 76 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 135
Query: 58 ------VISGSNN-----------------------------------LELSLDIYQLSS 76
+ S +NN L+LS+D+ Q +S
Sbjct: 136 RLPNGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 195
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 196 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 255
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 256 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 314
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 315 FDDDIVEKIDAQAIEEFYGLTSDISKNS 342
>gi|432853252|ref|XP_004067615.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Oryzias
latipes]
Length = 369
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q +S+ L F E L + Y CE C K EA K+ ++K P++ L L
Sbjct: 199 LDLSVDVEQNTSITHCLRDFSNTETLCSEYKYYCETCCSKQEAQKRMRVKKLPMILALHL 258
Query: 125 KRFNYL-----CLKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L G ++ R +LV+ V+H GS GHY
Sbjct: 259 KRFKYMEQLHRYTKLSYRVVFPLELRLFNTSGDAVNLDRMYDLVAVVVHCGSGPNRGHYI 318
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
I S G + F DD V+ + Q + Y + ++ +S
Sbjct: 319 TI-VKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNS 357
>gi|410920842|ref|XP_003973892.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like [Takifugu
rubripes]
Length = 369
Score = 69.3 bits (168), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q +S+ L F E L + Y CE C K EA K+ ++K P++ L L
Sbjct: 199 LDLSVDVEQNTSITHCLRDFSNTETLCSEYKYYCETCCSKQEAQKRMRVKKLPMILALHL 258
Query: 125 KRFNYL-----CLKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L G ++ R +LV+ V+H GS GHY
Sbjct: 259 KRFKYMEQLHRYTKLSYRVVFPLELRLFNTSGDAVNLDRMYDLVAVVVHCGSGPNRGHYI 318
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
I S G + F DD V+ + Q + Y + ++ +S
Sbjct: 319 TI-VKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNS 357
>gi|440900637|gb|ELR51720.1| Ubiquitin carboxyl-terminal hydrolase 12, partial [Bos grunniens
mutus]
Length = 353
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 107/267 (40%), Gaps = 61/267 (22%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLKV-- 58
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 76 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 135
Query: 59 ------ISGSNN-----------------------------------LELSLDIYQLSSL 77
I NN L+LS+D+ Q +S+
Sbjct: 136 RLPNGNIDSENNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSI 195
Query: 78 DEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----L 132
L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 196 THCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT 255
Query: 133 KISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYF 186
K+S V PL L G + R +LV+ V+H GS GHY I S + F
Sbjct: 256 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLLF 314
Query: 187 GDDRVQASNLQQVTNAYVVIYELLPSS 213
DD V+ + Q + Y + ++ +S
Sbjct: 315 DDDIVEKIDAQAIEEFYGLTSDISKNS 341
>gi|413943501|gb|AFW76150.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 944
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 63/250 (25%), Positives = 107/250 (42%), Gaps = 51/250 (20%)
Query: 9 QAESGS--AIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLE 66
Q SGS P I++ L I + R ED+HEF+ + I+ + + L G ++
Sbjct: 247 QRASGSLHPFAPTNILSHLPNIGGNLGVGRQEDAHEFMRFAIDKMQSACLDEYGGEKAVD 306
Query: 67 LSL-------------------------------DIYQLS--------SLDEALGQFFAK 87
LS+ ++ L+ SL+ L QF A
Sbjct: 307 LSIQETTIIQHIFGGRLQSQVQCTTCGMVSNRYDNMMDLTVEIQGDAESLERCLDQFTAV 366
Query: 88 EYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEF 146
E+L DN Y+C+ C +A K S+++ P + + LKRF K++ V P+ L+
Sbjct: 367 EWLDGDNKYKCDGCNDYVKARKHLSVQQAPNILTITLKRFQTGRFGKLNKRVTFPMELDL 426
Query: 147 GKFMHCRR-----NLVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV 199
+M C +L + V+H ++SF GHY C G ++ D +V + ++V
Sbjct: 427 TPYMSCTDGSDLYDLYAVVVHLDMLNASFFGHYICYIKGYQGRWYKIDDCKVMVVDEEEV 486
Query: 200 --TNAYVVIY 207
AY+++Y
Sbjct: 487 HAQGAYMLLY 496
>gi|281345515|gb|EFB21099.1| hypothetical protein PANDA_013569 [Ailuropoda melanoleuca]
Length = 327
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 109/268 (40%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLK--- 57
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 49 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 108
Query: 58 ------VISGSNN-----------------------------------LELSLDIYQLSS 76
+ S +NN L+LS+D+ Q +S
Sbjct: 109 RLPNGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 168
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 169 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 228
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 229 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 287
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 288 FDDDIVEKIDAQAIEEFYGLTSDISKNS 315
>gi|47219352|emb|CAG10981.1| unnamed protein product [Tetraodon nigroviridis]
Length = 369
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q +S+ L F E L + Y CE C K EA K+ ++K P++ L L
Sbjct: 199 LDLSVDVEQNTSITHCLRDFSNTETLCSEYKYYCETCCSKQEAQKRMRVKKLPMILALHL 258
Query: 125 KRFNYL-----CLKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L G ++ R +LV+ V+H GS GHY
Sbjct: 259 KRFKYMEQLHRYTKLSYRVVFPLELRLFNTSGDAVNLDRMYDLVAVVVHCGSGPNRGHYI 318
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
I S G + F DD V+ + Q + Y + ++ +S
Sbjct: 319 TI-VKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNS 357
>gi|440804615|gb|ELR25492.1| ubiquitin specific protease, putative [Acanthamoeba castellanii
str. Neff]
Length = 695
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/158 (29%), Positives = 81/158 (51%), Gaps = 17/158 (10%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+L+L++ +SL+EAL + E+ Y+C +C A KQ ++++ P + ++ L
Sbjct: 211 LDLNLELSAGASLEEALDSYTTIEHFDLSTGYKCGRCNKVVTAQKQLTVDRAPPILVVQL 270
Query: 125 KRFNYLC--LKISCAVQVPLYLEFGKFMHCRRN--------LVSAVIHHGSSSFSGHYNC 174
KRF+ + KI+ V L+ K M + L ++H+G + FSGHY
Sbjct: 271 KRFDVMSGGGKINKTVTFREQLDIAKVMSEDKKEEGGVLYELYGTIVHYGRTMFSGHYVS 330
Query: 175 IGSTSSGSYHYFGDDRVQASN----LQQVTNAYVVIYE 208
S+G +H F DD+V N L+Q NAY++ ++
Sbjct: 331 F-IKSNGLWHLFDDDQVVEVNNAIVLKQ--NAYMLFFQ 365
>gi|395850175|ref|XP_003797673.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Otolemur
garnettii]
gi|335773139|gb|AEH58293.1| ubiquitin carboxyl-terminal hydrolase 1-like protein [Equus
caballus]
Length = 370
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 109/268 (40%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLK--- 57
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 92 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 151
Query: 58 ------VISGSNN-----------------------------------LELSLDIYQLSS 76
+ S +NN L+LS+D+ Q +S
Sbjct: 152 RLPNGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 211
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 212 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 271
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 272 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 330
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 331 FDDDIVEKIDAQAIEEFYGLTSDISKNS 358
>gi|431920985|gb|ELK18754.1| Ubiquitin carboxyl-terminal hydrolase 12 [Pteropus alecto]
Length = 479
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/258 (26%), Positives = 104/258 (40%), Gaps = 62/258 (24%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLI------------------ 48
A Q + I P+ I +L+ F+ Y +D+HEFL YL+
Sbjct: 201 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 260
Query: 49 ---------EG---------IHRSYLKVISGSNN--------------LELSLDIYQLSS 76
EG +H + ++ L+LS+D+ Q +S
Sbjct: 261 RLPNGSIDGEGSGGAPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 320
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L ++ Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 321 ITHCLRGFSNTETLCSEHKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 380
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 381 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 439
Query: 186 FGDDRVQASNLQQVTNAY 203
F DD V+ + Q + Y
Sbjct: 440 FDDDIVEKIDAQAIEEFY 457
>gi|358058415|dbj|GAA95799.1| hypothetical protein E5Q_02456 [Mixia osmundae IAM 14324]
Length = 774
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 72/275 (26%), Positives = 104/275 (37%), Gaps = 62/275 (22%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEG---------------- 50
+ Q ++ + P+ I +LK F +D+HEFL YLI
Sbjct: 253 SSQPKALGTVAPQAFITQLKRENELFRSTMHQDAHEFLNYLINTVSEDVEERAKGFTRPD 312
Query: 51 ----------IHRSYLKVISGSNN--------------LELSLDIYQLSSLDEALGQFFA 86
IH + +++ L+LS+DI Q SS+ L QF A
Sbjct: 313 GELANRSSTFIHSLFAGLLTNETRCLTCETVTSRDEAFLDLSIDIEQNSSISACLRQFSA 372
Query: 87 KEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQVP 141
E L N + C+ CG EA K+ +++ P V L LKRF Y +K+ V P
Sbjct: 373 SEMLCSRNKFSCDHCGSLQEAEKRMKVKELPNVLALHLKRFKYQENLGRHVKLGYRVVFP 432
Query: 142 LYLEF------GKFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
L L K L + V+H G GHY + T S + F DD V N
Sbjct: 433 LELRLFNTADDAKDADRLYELFAIVVHIGIGPHHGHYVTVLRTGS-RWLLFDDDSVTLVN 491
Query: 196 LQQVTN----------AYVVIYELLPSSLHHLNSS 220
++ AYV+ Y+ +H L S
Sbjct: 492 EAEIQTFFGGGTASGGAYVLFYQAAELDVHALAVS 526
>gi|154275196|ref|XP_001538449.1| hypothetical protein HCAG_06054 [Ajellomyces capsulatus NAm1]
gi|150414889|gb|EDN10251.1| hypothetical protein HCAG_06054 [Ajellomyces capsulatus NAm1]
Length = 746
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 56/199 (28%), Positives = 86/199 (43%), Gaps = 22/199 (11%)
Query: 25 LKLIAHHFEYYRP---EDSHEFLLYLIEGI--------HRSYLKVISGSNNLELSLDIYQ 73
L+++ E +R +D+HEFL L+ + RS I + +LS+D+ Q
Sbjct: 207 LEVLRREHEMFRTAMHQDAHEFLNLLLNEVVANVEAEAERSLPPEIDQQSESDLSVDLDQ 266
Query: 74 LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL--- 130
SS+ L +F +E L N + C+ CG EA K+ I++ P + L LKRF Y
Sbjct: 267 HSSVTSCLRKFSEEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHLKRFKYTEDL 326
Query: 131 --CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGS 182
K+ V P YL + L + V+H G + GHY I T
Sbjct: 327 QRLQKLFHRVVYPYYLRLFNTTDDTEDPDRLYELYAVVVHIGGGPYHGHYVAIIKTEDRG 386
Query: 183 YHYFGDDRVQASNLQQVTN 201
+ F D+ V+ + V N
Sbjct: 387 WLLFDDEMVEPVDKNYVRN 405
>gi|224063313|ref|XP_002301091.1| predicted protein [Populus trichocarpa]
gi|222842817|gb|EEE80364.1| predicted protein [Populus trichocarpa]
Length = 1095
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/266 (24%), Positives = 113/266 (42%), Gaps = 50/266 (18%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH------------------ 52
E S + P I+++L+ I R ED+HEFL Y I+ +
Sbjct: 615 EGKSPLSPIGILSQLQNIGSQLGNGREEDAHEFLRYAIDAMQSVCLKEARVNAVDSFEEE 674
Query: 53 ------------RSYLKVIS-------GSNNLELSLDIY-QLSSLDEALGQFFAKEYLVR 92
RS +K + ++L+++I + L++AL +F E L
Sbjct: 675 ATLIGLTFGGYLRSKIKCMKCHYKSEWQERMMDLTVEIEGDIGKLEDALRRFTGTEILDG 734
Query: 93 DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMH 151
DN YQC +C +A K+ +I + P V + LKRF K++ +++ P L+ +M
Sbjct: 735 DNKYQCGRCRSYEKAKKKLTILEAPNVLTIALKRFQSGKFGKLNKSIRFPEILDLAPYMS 794
Query: 152 CRRN------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TN 201
+ L ++H +++FSGHY C + D V A L++V
Sbjct: 795 GTSDKSPIYRLYGVIVHLDVMNAAFSGHYVCYVKNIQNKWFKIDDSTVTAVELERVLSKG 854
Query: 202 AYVVIY-ELLPSSLHHLNSSLHSSSP 226
AY+++Y P + + S + SS P
Sbjct: 855 AYMLLYARCSPRAPRLIRSRIISSDP 880
>gi|211904161|ref|NP_001127798.2| ubiquitin specific peptidase [Nasonia vitripennis]
Length = 353
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/263 (25%), Positives = 109/263 (41%), Gaps = 57/263 (21%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLI------------------ 48
A Q + +I P+ I +L+ F+ Y +D+HEFL +LI
Sbjct: 78 ATQKKKVGSIAPKKFIARLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNQSKPAG 137
Query: 49 --------------------EGIHRSYLKVIS-------GSNNLELSLDIYQLSSLDEAL 81
+GI S + ++ + +L +D+ Q +S+ L
Sbjct: 138 GKGAGDAGTPPEPTWVHEIFQGILTSETRCLNCETVSSKDEDFFDLQVDVDQNTSITHCL 197
Query: 82 GQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----LKISC 136
F E L DN ++C+ C EA K+ ++K P++ L LKRF Y+ +K+S
Sbjct: 198 KCFSNTETLCSDNKFKCDHCSSYQEAQKRMMLKKLPMILALHLKRFKYVEQYNRHIKVSH 257
Query: 137 AVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDR 190
V PL L ++ R +LV+ VIH GS GHY I S G + F DD
Sbjct: 258 RVVFPLELRLFNTSDDAVNPDRLYDLVAVVIHCGSGPNRGHYISI-VKSHGFWLLFDDDM 316
Query: 191 VQASNLQQVTNAYVVIYELLPSS 213
V + + + Y + ++ +S
Sbjct: 317 VDKIDSSTIEDFYGLTSDIQKNS 339
>gi|449479063|ref|XP_002187377.2| PREDICTED: uncharacterized protein LOC100225609 [Taeniopygia
guttata]
Length = 819
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 50/255 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK--- 57
+RK L++ S SAI+P ++ LK I FEY R E++++FL ++ +HR+ L
Sbjct: 180 VRKVLSS----SASAILPGAVLRDLKFIGEEFEYDRQENAYKFLRRTLDAMHRACLSCNL 235
Query: 58 ------------------------------VISGSNNLELSLDIYQLSSLDEALGQFFAK 87
V S L++SLDI SSL L
Sbjct: 236 DVSSQETTIVHQIFRGFMKSRVTCLSCQAVVDSYKAFLDVSLDIKAASSLTTVLEDCVTP 295
Query: 88 EYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEF 146
+ L + ++C KC K A+K+ ++ + P V L L+R + + KI+ V+ P YL+
Sbjct: 296 KQLDQKGCFRCSKCKKKAAASKKVTVHRAPRVLTLCLERADQWTGTKINKFVEYPEYLDL 355
Query: 147 GKFMH--------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M C +L + VIH G + GH+ C S+G ++ D+ V ++
Sbjct: 356 RPYMSDTAGEPLLC--SLYAIVIHSGDTCLEGHFLCYVKASNGLWYRMDDESVDNCDIHT 413
Query: 199 V--TNAYVVIYELLP 211
V AY++ Y P
Sbjct: 414 VLGQQAYLLFYARAP 428
>gi|335296741|ref|XP_003130951.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Sus scrofa]
Length = 366
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 107/268 (39%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLKV-- 58
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 88 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 147
Query: 59 ------ISGSNN------------------------------------LELSLDIYQLSS 76
I NN L+LS+D+ Q +S
Sbjct: 148 RLPNGNIDTENNHSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 207
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 208 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 267
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 268 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPHRGHYIAI-VKSHDFWLL 326
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISKNS 354
>gi|410947218|ref|XP_003980349.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Felis catus]
Length = 440
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 107/268 (39%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLKV-- 58
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 162 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 221
Query: 59 ------ISGSNN------------------------------------LELSLDIYQLSS 76
I NN L+LS+D+ Q +S
Sbjct: 222 RLPNGNIDSENNSSPPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 281
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 282 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 341
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 342 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 400
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 401 FDDDIVEKIDAQAIEEFYGLTSDISKNS 428
>gi|294979873|pdb|3MHH|A Chain A, Structure Of The Saga Ubp8SGF11SUS1SGF73 DUB MODULE
gi|294979877|pdb|3MHS|A Chain A, Structure Of The Saga Ubp8SGF11SUS1SGF73 DUB MODULE BOUND
Ubiquitin Aldehyde
gi|400261283|pdb|4FJC|A Chain A, Structure Of The Saga Ubp8SGF11(1-72, Delta-Znf)SUS1SGF73
DUB Module
gi|400261287|pdb|4FJC|E Chain E, Structure Of The Saga Ubp8SGF11(1-72, Delta-Znf)SUS1SGF73
DUB Module
Length = 476
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 97/244 (39%), Gaps = 64/244 (26%)
Query: 28 IAHHFEYYRPEDSHEFLLYLIEGIHRSYL------KVISGSNN----------------- 64
I + Y +D+HEF ++I IH+SY+ K +S +NN
Sbjct: 231 INQNLAGYSQQDAHEFWQFIINQIHQSYVLDLPNAKEVSRANNKQCECIVHTVFEGSLES 290
Query: 65 ------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTE 106
L+LSLDI L E L F KE L +D Y C +C +
Sbjct: 291 SIVCPGCQNNSKTTIDPFLDLSLDIKDKKKLYECLDSFHKKEQL-KDFNYHCGECNSTQD 349
Query: 107 ATKQFSIEKPPIVFILLLKRFNYLC----LKISCAVQVPLYL---------------EFG 147
A KQ I K P V +L LKRF +L K+ ++ P YL E G
Sbjct: 350 AIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYCSTKEKDKHSENG 409
Query: 148 KFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
K L+ V H G+ + GHY S G + F D V + + ++V AY++
Sbjct: 410 KVPDIIYELIGIVSHKGTVN-EGHYIAFCKISGGQWFKFNDSMVSSISQEEVLKEQAYLL 468
Query: 206 IYEL 209
Y +
Sbjct: 469 FYTI 472
>gi|291410352|ref|XP_002721472.1| PREDICTED: Ubiquitin carboxyl-terminal hydrolase 12-like
[Oryctolagus cuniculus]
Length = 475
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/258 (27%), Positives = 104/258 (40%), Gaps = 62/258 (24%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLK--- 57
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 197 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 256
Query: 58 ------VISGSNN-----------------------------------LELSLDIYQLSS 76
+ S +NN L+LS+D+ Q +S
Sbjct: 257 RLPNGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 316
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 317 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 376
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 377 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 435
Query: 186 FGDDRVQASNLQQVTNAY 203
F DD V+ + Q + Y
Sbjct: 436 FDDDIVEKIDAQAIEEFY 453
>gi|148227948|ref|NP_001080289.1| ubiquitin specific peptidase 46 [Xenopus laevis]
gi|27696466|gb|AAH44045.1| Usp46-prov protein [Xenopus laevis]
Length = 249
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q +S+ L F E L + Y CE+C K EA K+ ++K P++ L L
Sbjct: 79 LDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHL 138
Query: 125 KRFNYLC-----LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L G + R +LV+ V+H GS GHY
Sbjct: 139 KRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYI 198
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
I S G + F DD V+ + Q + Y + ++ +S
Sbjct: 199 TI-VKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNS 237
>gi|350276273|ref|NP_001231910.1| ubiquitin carboxyl-terminal hydrolase 46 [Danio rerio]
gi|251765180|sp|A5WWB0.2|UBP46_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 46; AltName:
Full=Deubiquitinating enzyme 46; AltName: Full=Ubiquitin
thioesterase 46; AltName:
Full=Ubiquitin-specific-processing protease 46
Length = 370
Score = 68.9 bits (167), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q +S+ L F E L + Y CE C K EA K+ ++K P++ L L
Sbjct: 200 LDLSVDVEQNTSITHCLRDFSNTETLCSEYKYYCEMCCSKQEAQKRMRVKKLPMILALHL 259
Query: 125 KRFNYL-----CLKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L G ++ R +LV+ V+H GS GHY
Sbjct: 260 KRFKYMEQLHRYTKLSYRVVFPLELRLFNTSGDAVNLDRMYDLVAVVVHCGSGPNRGHYI 319
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
I S G + F DD V+ + Q + Y + ++ +S
Sbjct: 320 TI-VKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNS 358
>gi|164424898|ref|XP_965281.2| hypothetical protein NCU08378 [Neurospora crassa OR74A]
gi|157070708|gb|EAA36045.2| hypothetical protein NCU08378 [Neurospora crassa OR74A]
Length = 827
Score = 68.9 bits (167), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + SS+ L +F A+E L N + C++CG EA K+ I+K P V L L
Sbjct: 295 LDLSIDLEEHSSVTSCLRKFSAEEMLCERNKFHCDRCGGLQEAEKRMKIKKLPKVLALHL 354
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P YL + L + ++H G +++ GHY
Sbjct: 355 KRFKYTEDYSRLQKLFHRVVYPYYLRMFNTTDDAEDPDRIYELYAVIVHIGGNAYHGHYV 414
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 415 SIIKTKDRGWVLFDDEMVEPVDKNFVANFFGDKPGMACAYVLFYQ 459
>gi|213510860|ref|NP_001133405.1| ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
gi|209153653|gb|ACI33173.1| Ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
Length = 372
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/270 (27%), Positives = 110/270 (40%), Gaps = 64/270 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q I P+ I +L+ F+ Y +D+HEFL YL+ I ++
Sbjct: 92 ANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEERKQDKTNG 151
Query: 57 KVISGS-----NN-------------------------------------LELSLDIYQL 74
++ +GS NN L+LS+D+ Q
Sbjct: 152 RLANGSLDSQNNNSNAPPPSTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN 211
Query: 75 SSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL---- 130
+S+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 212 TSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQLQ 271
Query: 131 -CLKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSY 183
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 272 RYTKLSYRVVFPLELRLFNTSGDATNPERLYDLVAVVVHCGSGPNRGHYIAI-VKSHDFW 330
Query: 184 HYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + E+ +S
Sbjct: 331 LLFDDDIVEKIDAQAIEEFYGLTSEISKNS 360
>gi|170084517|ref|XP_001873482.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164651034|gb|EDR15274.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 368
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 97/236 (41%), Gaps = 57/236 (24%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEG-------------------- 50
E G+ + P I+K+K + F +D+HEFL++L+
Sbjct: 106 ERGT-VSPRAFIDKVKELNELFRGTMHQDTHEFLMFLLNRIVEEIEEERKELLNGGAKEE 164
Query: 51 ----------IHRSYLKVISGSNN--------------LELSLDIYQLSSLDEALGQFFA 86
+H+ + V++ L+LS+DI Q SS+ L QF A
Sbjct: 165 DRTSPQDATLVHKLFEGVLTSETRCLTCETVSSRDESFLDLSIDIEQNSSVTACLRQFSA 224
Query: 87 KEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---------LCLKISCA 137
E L + N + C+ C EA K+ I+K P V L LKRF Y L +++
Sbjct: 225 SEMLCQKNKFFCDACCDLQEAEKRMKIKKLPNVLALHLKRFKYQEDVGRYIKLAYRVAFP 284
Query: 138 VQVPLYLEFGKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV 191
+ + L+ R NL + V+H G+ GHY I T GS+ F DD V
Sbjct: 285 MDLRLFNTVDDMDDSDRLYNLFAVVVHIGNGPHHGHYISIIKT-HGSWLVFDDDNV 339
>gi|119929778|ref|XP_001255627.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Bos
taurus]
Length = 533
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 45/233 (19%)
Query: 19 ELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN-------------- 64
E+I + L+A F ++ ED+HEFL++ + + + L S +
Sbjct: 153 EVIRPRKDLLAG-FHRHQQEDAHEFLMFTLNAMQQGCLSASQPSGHASEDTTVIRQIFGG 211
Query: 65 ---------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGY 103
L++SLDI S+++AL + E L DN Y C C
Sbjct: 212 TWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDCGVCLR 271
Query: 104 KTEATKQFSIEKPPIVFILLLKRFNYLC-LKISCAVQVPLYLEFGKFMHCRRN------L 156
K ATK+ ++ V +L+LKRF + K + + P L+ + R+ L
Sbjct: 272 KVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEARYPQCLDLQPYTSERKAGPLGYVL 331
Query: 157 VSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+ ++H G S GHY C +G ++ D +V A + +AYV+ Y
Sbjct: 332 YAVLVHSGWSCERGHYFCYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFY 384
>gi|327281639|ref|XP_003225554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Anolis
carolinensis]
Length = 370
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 107/268 (39%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLK--- 57
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ + R K
Sbjct: 92 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTVADILQEERKQEKQNG 151
Query: 58 -----VISGSNN------------------------------------LELSLDIYQLSS 76
I NN L+LS+D+ Q +S
Sbjct: 152 RLPNGCIDSENNNSLPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 211
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 212 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 271
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 272 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 330
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 331 FDDDIVEKIDAQAIEEFYGLTSDISKNS 358
>gi|242000514|ref|XP_002434900.1| hypothetical protein IscW_ISCW018973 [Ixodes scapularis]
gi|215498230|gb|EEC07724.1| hypothetical protein IscW_ISCW018973 [Ixodes scapularis]
Length = 1161
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 49/156 (31%), Positives = 70/156 (44%), Gaps = 41/156 (26%)
Query: 36 RPEDSHEFLLYLIE-------------------------------GIHRSY---LKVISG 61
+ ED+HEFL Y+++ G HRS ++
Sbjct: 420 KQEDAHEFLRYVVDNLWKAALANHDGGPKLDPASKETTVVNEIFGGYHRSQVICMRCKKT 479
Query: 62 SNN----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPP 117
SN ++L LDI SSL++AL +F E L DN Y+C +C K EA K+F++ +PP
Sbjct: 480 SNTYDHFMDLILDIKNASSLEKALEKFVEPELLQNDNAYKCPRCNVKVEAQKRFTVHRPP 539
Query: 118 IVFILLLKRFNYLCL---KISCAVQVPLYLEFGKFM 150
V KRF+ + KI+ V P LE FM
Sbjct: 540 NVATFQFKRFDSNRMFGGKITKHVSYPERLEMRPFM 575
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 32/79 (40%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 75 SSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-- 132
SSL++AL +F E L DN Y+C +C K EA K+F++ +PP V KRF+ +
Sbjct: 339 SSLEKALEKFVEPELLQNDNAYKCPRCNVKVEAQKRFTVHRPPNVATFQFKRFDSNRMFG 398
Query: 133 -KISCAVQVPLYLEFGKFM 150
KI+ V P LE FM
Sbjct: 399 GKITKHVSYPERLEMRPFM 417
>gi|400261275|pdb|4FIP|A Chain A, Structure Of The Saga Ubp8(S144n)SGF11(1-72,
Delta-Znf)SUS1SGF73 Dub Module
gi|400261279|pdb|4FIP|E Chain E, Structure Of The Saga Ubp8(S144n)SGF11(1-72,
Delta-Znf)SUS1SGF73 Dub Module
gi|400261291|pdb|4FK5|A Chain A, Structure Of The Saga Ubp8(S144n)SGF11SUS1SGF73 DUB MODULE
Length = 476
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 97/244 (39%), Gaps = 64/244 (26%)
Query: 28 IAHHFEYYRPEDSHEFLLYLIEGIHRSYL------KVISGSNN----------------- 64
I + Y +D+HEF ++I IH+SY+ K +S +NN
Sbjct: 231 INQNLAGYSQQDAHEFWQFIINQIHQSYVLDLPNAKEVSRANNKQCECIVHTVFEGSLES 290
Query: 65 ------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTE 106
L+LSLDI L E L F KE L +D Y C +C +
Sbjct: 291 SIVCPGCQNNSKTTIDPFLDLSLDIKDKKKLYECLDSFHKKEQL-KDFNYHCGECNSTQD 349
Query: 107 ATKQFSIEKPPIVFILLLKRFNYLC----LKISCAVQVPLYL---------------EFG 147
A KQ I K P V +L LKRF +L K+ ++ P YL E G
Sbjct: 350 AIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYCSTKEKDKHSENG 409
Query: 148 KFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
K L+ V H G+ + GHY S G + F D V + + ++V AY++
Sbjct: 410 KVPDIIYELIGIVSHKGTVN-EGHYIAFCKISGGQWFKFNDSMVSSISQEEVLKEQAYLL 468
Query: 206 IYEL 209
Y +
Sbjct: 469 FYTI 472
>gi|417410176|gb|JAA51565.1| Putative ubiquitin carboxyl-terminal hydrolase 12, partial
[Desmodus rotundus]
Length = 374
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I +
Sbjct: 96 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 155
Query: 57 KVISGS----NN------------------------------------LELSLDIYQLSS 76
++ +GS NN L+LS+D+ Q +S
Sbjct: 156 RLPNGSVDSENNHSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 215
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 216 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 275
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 276 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 334
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 335 FDDDIVEKIDAQAIEEFYGLTSDISKNS 362
>gi|6323879|ref|NP_013950.1| Ubp8p [Saccharomyces cerevisiae S288c]
gi|1717872|sp|P50102.1|UBP8_YEAST RecName: Full=Ubiquitin carboxyl-terminal hydrolase 8; AltName:
Full=Deubiquitinating enzyme 8; AltName: Full=Ubiquitin
thioesterase 8; AltName:
Full=Ubiquitin-specific-processing protease 8
gi|295789530|pdb|3M99|A Chain A, Structure Of The Ubp8-Sgf11-Sgf73-Sus1 Saga Dub Module
gi|887604|emb|CAA90194.1| unknown [Saccharomyces cerevisiae]
gi|151945927|gb|EDN64159.1| ubiquitin-specific processing protease [Saccharomyces cerevisiae
YJM789]
gi|285814227|tpg|DAA10122.1| TPA: Ubp8p [Saccharomyces cerevisiae S288c]
gi|392297392|gb|EIW08492.1| Ubp8p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 471
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 97/244 (39%), Gaps = 64/244 (26%)
Query: 28 IAHHFEYYRPEDSHEFLLYLIEGIHRSYL------KVISGSNN----------------- 64
I + Y +D+HEF ++I IH+SY+ K +S +NN
Sbjct: 226 INQNLAGYSQQDAHEFWQFIINQIHQSYVLDLPNAKEVSRANNKQCECIVHTVFEGSLES 285
Query: 65 ------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTE 106
L+LSLDI L E L F KE L +D Y C +C +
Sbjct: 286 SIVCPGCQNNSKTTIDPFLDLSLDIKDKKKLYECLDSFHKKEQL-KDFNYHCGECNSTQD 344
Query: 107 ATKQFSIEKPPIVFILLLKRFNYLC----LKISCAVQVPLYL---------------EFG 147
A KQ I K P V +L LKRF +L K+ ++ P YL E G
Sbjct: 345 AIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYCSTKEKDKHSENG 404
Query: 148 KFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
K L+ V H G+ + GHY S G + F D V + + ++V AY++
Sbjct: 405 KVPDIIYELIGIVSHKGTVN-EGHYIAFCKISGGQWFKFNDSMVSSISQEEVLKEQAYLL 463
Query: 206 IYEL 209
Y +
Sbjct: 464 FYTI 467
>gi|268569258|ref|XP_002640473.1| Hypothetical protein CBG13606 [Caenorhabditis briggsae]
Length = 538
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 93/226 (41%), Gaps = 50/226 (22%)
Query: 31 HFEYYRPEDSHEFLLYLIEGIHRSYLKV-------------ISGS--------------- 62
F +R DSHEFL YL++ +H K IS S
Sbjct: 307 RFRGFRQHDSHEFLRYLLDQMHTEMRKCRNLPEMPDDKTTPISKSFEGTLQSSVICQTCR 366
Query: 63 -------NNLELSLDIYQLSS----LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQF 111
+ ++LSLD+ ++S L + L FF +E L + +C KC K +KQ
Sbjct: 367 NVSNKMDDFMDLSLDVPRVSKARYRLSDCLDLFFQRELLEKGEKPECSKCKSKQTCSKQM 426
Query: 112 SIEKPPIVFILLLKRFNYLCLKISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHH 163
I+K P V L +KRF KI ++ PL L F+ C L S ++H
Sbjct: 427 FIKKLPEVLCLHIKRFRDNGGKIDTLIEFPLTGLSVDDFLTEDSDEPPCVYELHSIIVHI 486
Query: 164 GSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
G SGHY G + Y F D V+A +T AYV++Y
Sbjct: 487 GYGCSSGHYIAFGRRGAKWYQ-FDDTVVKAMETSNITKQRAYVLMY 531
>gi|134133230|ref|NP_001077025.1| ubiquitin carboxyl-terminal hydrolase 12A [Danio rerio]
gi|251765092|sp|A4FUN7.1|UBP12_DANRE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12A; AltName:
Full=Deubiquitinating enzyme 12A; AltName:
Full=Ubiquitin thioesterase 12A; AltName:
Full=Ubiquitin-specific-processing protease 12A
gi|133778337|gb|AAI15287.1| Usp12 protein [Danio rerio]
Length = 371
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 109/269 (40%), Gaps = 63/269 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q I P+ I +L+ F+ Y +D+HEFL YL+ I +
Sbjct: 92 ANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEERKQDKQNG 151
Query: 57 KVISGS-----NN------------------------------------LELSLDIYQLS 75
K+ +G+ NN L+LS+D+ Q +
Sbjct: 152 KLANGTLDSQNNNSTPPSTTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT 211
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL----- 130
S+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 212 SITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQLQR 271
Query: 131 CLKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 272 YTKLSYRVVFPLELRLFNTSGDATNPERLYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWL 330
Query: 185 YFGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + E+ +S
Sbjct: 331 LFDDDIVEKIDAQAIEEFYGLTSEISKNS 359
>gi|391328793|ref|XP_003738868.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Metaseiulus occidentalis]
Length = 334
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 69/242 (28%), Positives = 102/242 (42%), Gaps = 52/242 (21%)
Query: 2 RKTLAACQAE----------SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI 51
R+TL C A+ + P+ I +L+ F+ Y +D+HEFL YL+ I
Sbjct: 61 RETLLTCLADLFHNIHSHKKKTGTLAPKKFIARLRKDNEVFDNYLQQDAHEFLNYLLNTI 120
Query: 52 -----------HRSYL-----------------KVISGSNN--LELSLDIYQLSSLDEAL 81
S++ + IS + L+LS+DI +S+ L
Sbjct: 121 GDLLQAESISKEPSWVHEIFQGTLVNETRCLTCETISSKDEDFLDLSVDISPNTSISHCL 180
Query: 82 GQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----CLKISC 136
F + E L ++ Y CE+C K EA K ++K P + L LKRF Y K+S
Sbjct: 181 RGFSSTETLRGEHKYHCEQCNSKQEAQKSLKVKKLPPILALHLKRFKYTEQQNRNTKLSW 240
Query: 137 AVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDR 190
V PL L ++ R +LV+ V+H G+ GHY I S G + F DD
Sbjct: 241 RVVFPLELRLFNTSDDAVNGDRLYDLVAIVVHCGTGPNRGHYISI-VKSHGVWLLFDDDI 299
Query: 191 VQ 192
V
Sbjct: 300 VD 301
>gi|19338632|gb|AAL86740.1|AF441835_1 deubiquitinating enzyme UBH1 [Mus musculus]
Length = 355
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 108/268 (40%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLK--- 57
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 77 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 136
Query: 58 ------VISGSNN-----------------------------------LELSLDIYQLSS 76
V + NN L+LS+D+ Q +S
Sbjct: 137 RLRNGDVDNEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 196
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 197 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPLILALHLKRFKYMDQLHRY 256
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 257 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 315
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 316 FDDDIVEKIDAQAIEEFYGLTSDISKNS 343
>gi|34328057|ref|NP_035799.1| ubiquitin carboxyl-terminal hydrolase 12 [Mus musculus]
gi|81881643|sp|Q9D9M2.2|UBP12_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName: Full=Ubiquitin-hydrolyzing
enzyme 1; AltName: Full=Ubiquitin-specific-processing
protease 12
gi|26330798|dbj|BAC29129.1| unnamed protein product [Mus musculus]
gi|26355005|dbj|BAB24720.2| unnamed protein product [Mus musculus]
gi|45768743|gb|AAH68136.1| Ubiquitin specific peptidase 12 [Mus musculus]
gi|74189064|dbj|BAE39295.1| unnamed protein product [Mus musculus]
Length = 370
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 108/268 (40%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLK--- 57
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 92 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 151
Query: 58 ------VISGSNN-----------------------------------LELSLDIYQLSS 76
V + NN L+LS+D+ Q +S
Sbjct: 152 RLRNGDVDNEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 211
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 212 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPLILALHLKRFKYMDQLHRY 271
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 272 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 330
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 331 FDDDIVEKIDAQAIEEFYGLTSDISKNS 358
>gi|426343802|ref|XP_004038475.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
6-like, partial [Gorilla gorilla gorilla]
Length = 387
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 60/234 (25%), Positives = 98/234 (41%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL----KVISGSNN--------- 64
P +I + +A F + ED+HEFL++ ++ + ++ L +V SN+
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFAVDAMKKACLPGHKQVDHHSNDTTLIHQIFG 198
Query: 65 ----------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCALCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K ++ V IL+LKRF+ + K+ VQ P L+ +M +
Sbjct: 259 QKAPASKTLTLHTSAKVLILVLKRFSDVTGNKLVKNVQYPECLDMQPYMSQQITGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS + AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSALSQQAYVLFY 372
>gi|413936572|gb|AFW71123.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 890
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 82/157 (52%), Gaps = 12/157 (7%)
Query: 63 NNLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFI 121
N ++L+L+I+ + SL +AL QF A E L DN+Y+C +C +A KQ S+ + P +
Sbjct: 501 NIMDLTLEIHGWVESLQDALTQFTAPEDLDGDNMYKCGRCSAYVKARKQLSVHEVPNILT 560
Query: 122 LLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGS--SSFSGHY 172
++LKRF KI+ V P L+ F+ + L + V+H + +SFSGHY
Sbjct: 561 VVLKRFQSGKYGKINKCVTFPDMLDMVPFVTGSGDNPPLYFLYAVVVHVDTENASFSGHY 620
Query: 173 NCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
G++ D VQ ++ QV + AY++ Y
Sbjct: 621 ISYVKDMQGTWLRIDDSEVQVVSVNQVMSEGAYMLFY 657
>gi|413936571|gb|AFW71122.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 821
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 82/157 (52%), Gaps = 12/157 (7%)
Query: 63 NNLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFI 121
N ++L+L+I+ + SL +AL QF A E L DN+Y+C +C +A KQ S+ + P +
Sbjct: 501 NIMDLTLEIHGWVESLQDALTQFTAPEDLDGDNMYKCGRCSAYVKARKQLSVHEVPNILT 560
Query: 122 LLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGS--SSFSGHY 172
++LKRF KI+ V P L+ F+ + L + V+H + +SFSGHY
Sbjct: 561 VVLKRFQSGKYGKINKCVTFPDMLDMVPFVTGSGDNPPLYFLYAVVVHVDTENASFSGHY 620
Query: 173 NCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
G++ D VQ ++ QV + AY++ Y
Sbjct: 621 ISYVKDMQGTWLRIDDSEVQVVSVNQVMSEGAYMLFY 657
>gi|336464190|gb|EGO52430.1| hypothetical protein NEUTE1DRAFT_125926 [Neurospora tetrasperma
FGSC 2508]
Length = 827
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + SS+ L +F A+E L N + C++CG EA K+ I+K P V L L
Sbjct: 295 LDLSIDLEEHSSVTSCLRKFSAEEMLCERNKFHCDRCGGLQEAEKRMKIKKLPKVLALHL 354
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P YL + L + ++H G +++ GHY
Sbjct: 355 KRFKYTEDYSRLQKLFHRVVYPYYLRMFNTTDDAEDPDRIYELYAVIVHIGGNAYHGHYV 414
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 415 SIIKTKDRGWVLFDDEMVEPVDKNFVANFFGDKPGMACAYVLFYQ 459
>gi|73993500|ref|XP_543159.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Canis lupus
familiaris]
Length = 370
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 109/268 (40%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLK--- 57
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 92 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 151
Query: 58 ------VISGSNN-----------------------------------LELSLDIYQLSS 76
+ S +NN L+LS+D+ Q +S
Sbjct: 152 RLPNGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 211
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 212 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 271
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 272 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHEFWLL 330
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 331 FDDDIVEKIDAQAIEEFYGLTSDISKNS 358
>gi|350296273|gb|EGZ77250.1| cysteine proteinase [Neurospora tetrasperma FGSC 2509]
Length = 819
Score = 68.6 bits (166), Expect = 2e-09, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + SS+ L +F A+E L N + C++CG EA K+ I+K P V L L
Sbjct: 295 LDLSIDLEEHSSVTSCLRKFSAEEMLCERNKFHCDRCGGLQEAEKRMKIKKLPKVLALHL 354
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P YL + L + ++H G +++ GHY
Sbjct: 355 KRFKYTEDYSRLQKLFHRVVYPYYLRMFNTTDDAEDPDRIYELYAVIVHIGGNAYHGHYV 414
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 415 SIIKTKDRGWVLFDDEMVEPVDKNFVANFFGDKPGMACAYVLFYQ 459
>gi|392344528|ref|XP_001071809.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein 2
[Rattus norvegicus]
Length = 832
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 44/231 (19%)
Query: 21 IINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN---------------- 64
++ +++ F +R ED+HEFL++ + +H S L+ S
Sbjct: 443 VMKPSEILTSTFHKHRQEDAHEFLMFTLNAMHESCLRGCKQSETSSKDSSLIYDIFGGQM 502
Query: 65 -------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKT 105
L L LDI S+ +AL E L DN Y C +C K
Sbjct: 503 RSQIKCHHCQGTLDSYDPFLNLFLDICSAQSVKQALEDLVKLEELQGDNAYYCGRCREKM 562
Query: 106 EATKQFSIEKPPIVFILLLKR-FNYLCLKISCAVQVPLYLEFGKFMHCRR------NLVS 158
A+K ++ V +L+L R +++ K++ V P YL+ ++ L +
Sbjct: 563 PASKTTKVQTASKVLLLVLNRSYDFGGDKLNRVVSYPEYLDLQPYLSQPTAGPLPYALYA 622
Query: 159 AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
++H G + SGHY C S G ++ D +V ++ V + AY++ Y
Sbjct: 623 VLVHDGVTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFY 673
>gi|224138132|ref|XP_002326526.1| predicted protein [Populus trichocarpa]
gi|222833848|gb|EEE72325.1| predicted protein [Populus trichocarpa]
Length = 835
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 67/247 (27%), Positives = 101/247 (40%), Gaps = 51/247 (20%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHR----SYLKVISGSNN--- 64
SG + P ++N L+ I+ F Y+ ED+HEFL L+E + R S L S S++
Sbjct: 334 SGKILEPLKLVNNLENISSVFRRYQQEDAHEFLQCLLERLERHCLDSSLTDDSASSHDKN 393
Query: 65 -----------------------------LELSLDIYQLSSLDEALGQFFAKEYLVR-DN 94
++LSL+I SL AL F E + +
Sbjct: 394 IVERVFGGRLVSKLRCCNCGHCSDKYEPLIDLSLEIEDADSLQSALESFTKVEKIEDSET 453
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL---KISCAVQVPLYLEFGKFMH 151
+ CE C + KQ +++ P V L LK F KI VQ PL L+ + +
Sbjct: 454 KFTCESCKEEVSREKQLMLDQAPSVAALHLKIFKIDGTSVEKIGKHVQFPLELDLKPYTN 513
Query: 152 CRRN---------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN- 201
+ L + V+H G S SGHY C +S ++H D V + V +
Sbjct: 514 DNEDSDEVGFKYQLYAVVVHKGDSLMSGHYFCYIRSSPDTWHKLDDPEVSKEQEEFVLSQ 573
Query: 202 -AYVVIY 207
AY++ Y
Sbjct: 574 AAYILFY 580
>gi|194221795|ref|XP_001492940.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Equus
caballus]
Length = 414
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 109/268 (40%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLK--- 57
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 136 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 195
Query: 58 ------VISGSNN-----------------------------------LELSLDIYQLSS 76
+ S +NN L+LS+D+ Q +S
Sbjct: 196 RLPNGNIDSENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 255
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 256 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 315
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 316 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 374
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 375 FDDDIVEKIDAQAIEEFYGLTSDISKNS 402
>gi|334184367|ref|NP_001189575.1| ubiquitin carboxyl-terminal hydrolase 4 [Arabidopsis thaliana]
gi|330252198|gb|AEC07292.1| ubiquitin carboxyl-terminal hydrolase 4 [Arabidopsis thaliana]
Length = 379
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 33/215 (15%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
+ K A +A++ ++ PE I N LK + + P ++ +H+ + +++
Sbjct: 140 LEKETQATKADNETSSSPEKIANVLKAPLANGVHKEP---------IVTWVHKIFQGILT 190
Query: 61 GSNN--------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTE 106
L+LSLDI Q SS+ L F + E L ++ + C+KC E
Sbjct: 191 NETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQE 250
Query: 107 ATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQVPLYLEFG----KFMHCRRNLV 157
A K+ I+KPP + ++ LKRF Y+ K+S V PL L+ +++ +L
Sbjct: 251 AQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVDEYVDIEYSLF 310
Query: 158 SAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQ 192
+ V+H GS GHY + S + +F D+ V+
Sbjct: 311 AVVVHVGSGPNHGHYVSL-VKSHNHWLFFDDESVE 344
>gi|297804390|ref|XP_002870079.1| hypothetical protein ARALYDRAFT_329738 [Arabidopsis lyrata subsp.
lyrata]
gi|297315915|gb|EFH46338.1| hypothetical protein ARALYDRAFT_329738 [Arabidopsis lyrata subsp.
lyrata]
Length = 1082
Score = 68.6 bits (166), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 75/266 (28%), Positives = 114/266 (42%), Gaps = 54/266 (20%)
Query: 16 IIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHR------------SYLKVISG-- 61
I P +N L + F+ Y+ ED+HEFL +E + R S V +G
Sbjct: 626 IAPYYFLNNLNYFSPDFQRYQQEDAHEFLQAFLEKLERCGSDRRSFHGNISSQDVFAGRL 685
Query: 62 ----------------SNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKT 105
++ LSL+I +L AL F E L D C+ C K
Sbjct: 686 ISGLRCCNCNSVSETFEKSVGLSLEIEDADTLGSALESFTRVEKL--DEQLTCDTCNEKV 743
Query: 106 EATKQFSIEKPPIVFILLLKRF---NYLCLKISCAVQVPLYLEFGKFM-HCRRNLVSA-- 159
KQ ++K P+V LKRF + KI V++PL ++ +M + + N VS
Sbjct: 744 SKEKQMLLDKLPLVATFHLKRFKTNGFFMEKIFKHVKIPLEIDLQPYMRNSQENEVSTKY 803
Query: 160 -----VIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY--ELL 210
V H G S GHY+ ++ +H+F D +V + +V ++Y++ Y E
Sbjct: 804 HLYALVEHLGYSVAYGHYSSYVRSAPKIWHHFDDSKVTRIDEDRVLSQDSYILFYAREGT 863
Query: 211 P--SSLHH-----LNSSLHSSSPGSV 229
P SS + L +SL +SSP SV
Sbjct: 864 PWFSSAYEELQPLLEASLLNSSPKSV 889
>gi|148673864|gb|EDL05811.1| ubiquitin specific peptidase 12 [Mus musculus]
Length = 355
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 108/268 (40%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLK--- 57
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 77 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 136
Query: 58 ------VISGSNN-----------------------------------LELSLDIYQLSS 76
V + NN L+LS+D+ Q +S
Sbjct: 137 RLRNGDVDNEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 196
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 197 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPLILALHLKRFKYMDQLHRY 256
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 257 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 315
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 316 FDDDIVEKIDAQAIEEFYGLTSDISKNS 343
>gi|443688793|gb|ELT91385.1| hypothetical protein CAPTEDRAFT_151271 [Capitella teleta]
Length = 412
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/150 (35%), Positives = 74/150 (49%), Gaps = 12/150 (8%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC---L 132
SL+ F ++E L D C KC + + TK FSI++ P V I+ LKRFN
Sbjct: 260 SLESCFELFTSEEVLDGDEKPMCSKCKKRQKCTKSFSIQRFPKVLIIHLKRFNQDSSYRS 319
Query: 133 KISCAVQVPLY-LEFGKFMHCRRNLVS-----AVIHHGSSSFSGHYNCIGS-TSSGSYHY 185
K+S V PL LE +F + + AV +H + F GHY + ++H+
Sbjct: 320 KLSTMVNFPLQSLELNQFAAEKNGAPAMYNLFAVSNHSGTPFGGHYTAYTKHPETSTWHH 379
Query: 186 FGDDRV-QASNLQ-QVTNAYVVIYELLPSS 213
F D RV Q S Q Q + AYV+ YEL+ S
Sbjct: 380 FSDTRVSQISESQVQSSEAYVLFYELVDHS 409
>gi|18399935|ref|NP_565532.1| ubiquitin carboxyl-terminal hydrolase 4 [Arabidopsis thaliana]
gi|62901382|sp|Q8LAM0.2|UBP4_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 4; AltName:
Full=Deubiquitinating enzyme 4; Short=AtUBP4; AltName:
Full=Ubiquitin thioesterase 4; AltName:
Full=Ubiquitin-specific-processing protease 4
gi|2347100|gb|AAB67967.1| ubiquitin-specific protease [Arabidopsis thaliana]
gi|4567196|gb|AAD23612.1| ubiquitin-specific protease 4 (UBP4) [Arabidopsis thaliana]
gi|15081737|gb|AAK82523.1| At2g22310/T26C19.3 [Arabidopsis thaliana]
gi|18252271|gb|AAL62016.1| At2g22310/T26C19.3 [Arabidopsis thaliana]
gi|330252197|gb|AEC07291.1| ubiquitin carboxyl-terminal hydrolase 4 [Arabidopsis thaliana]
Length = 365
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 33/215 (15%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
+ K A +A++ ++ PE I N LK + + P ++ +H+ + +++
Sbjct: 126 LEKETQATKADNETSSSPEKIANVLKAPLANGVHKEP---------IVTWVHKIFQGILT 176
Query: 61 GSNN--------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTE 106
L+LSLDI Q SS+ L F + E L ++ + C+KC E
Sbjct: 177 NETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQE 236
Query: 107 ATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQVPLYLEFG----KFMHCRRNLV 157
A K+ I+KPP + ++ LKRF Y+ K+S V PL L+ +++ +L
Sbjct: 237 AQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVDEYVDIEYSLF 296
Query: 158 SAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQ 192
+ V+H GS GHY + S + +F D+ V+
Sbjct: 297 AVVVHVGSGPNHGHYVSL-VKSHNHWLFFDDESVE 330
>gi|341877732|gb|EGT33667.1| hypothetical protein CAEBREN_23731 [Caenorhabditis brenneri]
Length = 434
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 50/141 (35%), Positives = 68/141 (48%), Gaps = 19/141 (13%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q +S+ L F E L D Y CE C K EA K+ I+ PP V L L
Sbjct: 231 LDLSIDVEQNTSISHCLRVFSETETLCGDQKYFCETCSSKQEAQKRMRIKTPPPVLALHL 290
Query: 125 KRFNYLC-----LKISCAVQVPLYLE---------FGKFMHCRRNLVSAVIHHGSSSFSG 170
KRF Y+ K+S V PL L +G M+ +LV+ V+H G++ G
Sbjct: 291 KRFKYVDSLNRHTKLSYRVVFPLELRLFNVSDDAVYGDRMY---DLVATVVHCGATPNRG 347
Query: 171 HYNCIGSTSSGSYHYFGDDRV 191
HY I S S+ DD +
Sbjct: 348 HY--ITLVKSNSFWLVFDDDI 366
>gi|410906841|ref|XP_003966900.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Takifugu
rubripes]
Length = 374
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q +S+ L F E L + Y CE+C K EA K+ ++K P++ L L
Sbjct: 204 LDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHL 263
Query: 125 KRFNYLC-----LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L G + R +LV+ V+H GS GHY
Sbjct: 264 KRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYI 323
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
I S G + F DD V+ + Q + Y + ++ +S
Sbjct: 324 TI-VKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNS 362
>gi|348540585|ref|XP_003457768.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform 2
[Oreochromis niloticus]
Length = 372
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q +S+ L F E L + Y CE+C K EA K+ ++K P++ L L
Sbjct: 202 LDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHL 261
Query: 125 KRFNYLC-----LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L G + R +LV+ V+H GS GHY
Sbjct: 262 KRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRLYDLVAVVVHCGSGPNRGHYI 321
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
I S G + F DD V+ + Q + Y + ++ +S
Sbjct: 322 TI-VKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNS 360
>gi|221060400|ref|XP_002260845.1| Ubiquitin carboxyl-terminal hydrolase [Plasmodium knowlesi strain
H]
gi|193810919|emb|CAQ42817.1| Ubiquitin carboxyl-terminal hydrolase, putative [Plasmodium
knowlesi strain H]
Length = 1237
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 74/283 (26%), Positives = 114/283 (40%), Gaps = 55/283 (19%)
Query: 7 ACQAESGSAIIPELIINKLK-LIAHHFEYYRPEDSHEFLLYLIEGIHRSY---------- 55
AC S I ++I +K I +++ ED HE+L Y + + RS
Sbjct: 708 ACNIISKKCGIKNMLIPYIKKYICNNYIVGYQEDVHEYLRYFLCSLERSSFSSSIYIQKM 767
Query: 56 -------LKVISGSNNL--------ELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEK 100
+ + + NN+ ELSLDI ++L+EAL ++ +KE L+ DN Y C+
Sbjct: 768 FTGVTKNITICTKCNNVSLKYEQYYELSLDISSSNNLEEALKKYLSKETLMGDNGYYCDN 827
Query: 101 CGYKTEATKQFSIEKPPIVFILLLKRF----NYLCLKISCAVQVPLYLEFGKFMHC---- 152
C K +ATKQ I K P V + +KRF + +K + PLYL+ +++
Sbjct: 828 CRKKKKATKQCVINKLPRVLTIQIKRFFMNSKFNVVKNHKHISYPLYLDMKGYVNNYDLF 887
Query: 153 ----RRNLVS----------AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
N++S + H GS S N GS G D+ + Q
Sbjct: 888 QNDFNNNVISLYEKVNSSTGGISHQGSGVASDTRNGAGSDQRNGA---GSDQRNGAGSDQ 944
Query: 199 VTNAYVVIYELLPSSLHHLNSSLHSSSPGSVEPRTHHRNYMAH 241
S++H N S+P P H N +AH
Sbjct: 945 RNGVGSDQRNGASSNMHGDN----QSAPQGGRPNPHVLNQIAH 983
>gi|356518408|ref|XP_003527871.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
max]
Length = 1125
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/246 (26%), Positives = 105/246 (42%), Gaps = 49/246 (19%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE--------------------- 49
++ SA+ P II+ L+ I R ED+HEFL ++I+
Sbjct: 657 DTKSAVSPMGIISHLQNIGSQLGNGREEDAHEFLRHVIDTMQSVCLTEAGVNASGSLEED 716
Query: 50 ---------GIHRSYLKVISGSNN-------LELSLDIY-QLSSLDEALGQFFAKEYLVR 92
G RS +K + ++L+++I ++++L EAL +F + E L
Sbjct: 717 TTLMGQTFGGYLRSKIKCMRCGGKSEHQERMMDLTVEIEGEITTLVEALRRFTSTETLDG 776
Query: 93 DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMH 151
+N Y C +C +A K+ ++ + P V + LKRF K++ +Q P L FM
Sbjct: 777 ENKYHCVRCKSYEKAKKKLTVSEAPNVLTVALKRFQSGKFGKLNKPIQFPEILNLAPFMS 836
Query: 152 CRRN------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TN 201
+ L V+H ++SFSGHY C + D V A L +V
Sbjct: 837 GTSDKSPIYRLYGVVVHLDVMNASFSGHYVCYVKNIQNKWSKVDDSVVTAVELDRVLTKG 896
Query: 202 AYVVIY 207
AY++ Y
Sbjct: 897 AYILFY 902
>gi|189521699|ref|XP_688359.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like isoform 2
[Danio rerio]
Length = 383
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q +S+ L F E L + Y CE+C K EA K+ ++K P++ L L
Sbjct: 213 LDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEQCRSKQEAQKRMRVKKLPMILALHL 272
Query: 125 KRFNYLC-----LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L G + R +LV+ V+H GS GHY
Sbjct: 273 KRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRLYDLVAVVVHCGSGPNRGHYI 332
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
I S G + F DD V+ + Q + Y + ++ +S
Sbjct: 333 TI-VKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNS 371
>gi|51969076|dbj|BAD43230.1| unknown protein [Arabidopsis thaliana]
Length = 631
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 58/242 (23%), Positives = 105/242 (43%), Gaps = 54/242 (22%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--------------- 62
P II++L I Y R ED+HEF+ Y I+ + L G
Sbjct: 232 PMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCLDEFGGEKIVPPRSQETTLIQY 291
Query: 63 -----------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQC 98
N ++L ++++ SL+E L QF A+E+L DN+Y+C
Sbjct: 292 IFGGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAGSLEECLDQFTAEEWLHGDNMYKC 351
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFN---YLCLKISCAVQVPLYLEFGKFMHCRRN 155
++C +A K+ +I + P + + LKR+ Y K++ + P L+ +M +
Sbjct: 352 DRCSDYVKACKRLTIRRAPNILTIALKRYQGGRY--GKLNKRISFPETLDLNPYMSEGGD 409
Query: 156 ------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
L + ++H ++SF HY C G+++ D +++ L+ V AY++
Sbjct: 410 GSDVYKLYAVIVHLDMLNASFFSHYICYIKDFCGNWYRIDDSEIESVELEDVLSQRAYML 469
Query: 206 IY 207
+Y
Sbjct: 470 LY 471
>gi|392337921|ref|XP_001074389.3| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase DUB-1 [Rattus norvegicus]
Length = 549
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 44/231 (19%)
Query: 21 IINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN---------------- 64
++ +++ F +R ED+HEFL++ + +H S L+ S
Sbjct: 160 VMKPSEILTSTFHKHRQEDAHEFLMFTLNAMHESCLRGCKQSETSSKDSSLIYDIFGGQM 219
Query: 65 -------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKT 105
L L LDI S+ +AL E L DN Y C +C K
Sbjct: 220 RSQIKCHHCQGTLDSYDPFLNLFLDICSAQSVKQALEDLVKLEELQGDNAYYCGRCREKM 279
Query: 106 EATKQFSIEKPPIVFILLLKR-FNYLCLKISCAVQVPLYLEFGKFMHCRR------NLVS 158
A+K ++ V +L+L R +++ K++ V P YL+ ++ L +
Sbjct: 280 PASKTTKVQTASKVLLLVLNRSYDFGGDKLNRVVSYPEYLDLQPYLSQPTAGPLPYALYA 339
Query: 159 AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
++H G + SGHY C S G ++ D +V ++ V + AY++ Y
Sbjct: 340 VLVHDGVTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFY 390
>gi|399217770|emb|CCF74657.1| unnamed protein product [Babesia microti strain RI]
Length = 584
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 64/234 (27%), Positives = 99/234 (42%), Gaps = 44/234 (18%)
Query: 13 GSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHR---------SYLKVISGS- 62
G+ P I K K I + + +DSHEFL YL+E SY + + G
Sbjct: 154 GAVNNPFFSITK-KAIWSRYVPGKQQDSHEFLRYLVESFSTPMGAKSAPDSYKRNLIGQA 212
Query: 63 ----------------------NNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEK 100
N L+++LDI + SL+ + +F + L N Y C K
Sbjct: 213 FHGTLKTTVKCLQCKYTSEKLENFLDIALDITK-ESLENCIAEFIQPQQLTGSNKYHCPK 271
Query: 101 CGYKTEATKQFSIEKPPIVFILLLKRFN---YLCLKISCAVQVPLYLEFGKFMHCRRNLV 157
C K +AT + K P+V + LKRFN + K +++ P +++ + L
Sbjct: 272 CKNKRDATISLNFGKLPVVLCIALKRFNSGIFGLEKTFRSLKYPQHMDLNGINY---ELS 328
Query: 158 SAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN----LQQVTNAYVVIY 207
+ V H G S +SGHY G ++ F D V S L+Q +AY++ Y
Sbjct: 329 ALVCHLGHSLYSGHYVAYARAGHGFWNKFDDSHVSLSEKHQVLEQAKSAYLLFY 382
>gi|21593319|gb|AAM65268.1| ubiquitin-specific protease 4 (UBP4) [Arabidopsis thaliana]
Length = 365
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 33/215 (15%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
+ K A +A++ ++ PE I N LK + + P ++ +H+ + +++
Sbjct: 126 LEKETQATKADNETSSSPEKIANVLKAPLANGVHKEP---------IVTWVHKIFKGILT 176
Query: 61 GSNN--------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTE 106
L+LSLDI Q SS+ L F + E L ++ + C+KC E
Sbjct: 177 NETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQE 236
Query: 107 ATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQVPLYLEFG----KFMHCRRNLV 157
A K+ I+KPP + ++ LKRF Y+ K+S V PL L+ +++ +L
Sbjct: 237 AQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVDEYVDIEYSLF 296
Query: 158 SAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQ 192
+ V+H GS GHY + S + +F D+ V+
Sbjct: 297 AVVVHVGSGPNHGHYVSL-VKSHNHWLFFDDESVE 330
>gi|345795041|ref|XP_544715.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Canis
lupus familiaris]
Length = 520
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 117/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 222 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 281
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 282 GVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 341
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 342 LDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 401
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E HC +L + V+
Sbjct: 402 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPEHCLYDLAAVVV 461
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ V AY++ Y
Sbjct: 462 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEDTVVKAKAYILFY 508
>gi|345795043|ref|XP_865326.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Canis
lupus familiaris]
Length = 476
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 117/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 178 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 237
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 238 GVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 297
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 298 LDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 357
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E HC +L + V+
Sbjct: 358 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPEHCLYDLAAVVV 417
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ V AY++ Y
Sbjct: 418 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEDTVVKAKAYILFY 464
>gi|212722906|ref|NP_001132802.1| uncharacterized protein LOC100194291 [Zea mays]
gi|194695428|gb|ACF81798.1| unknown [Zea mays]
gi|413937406|gb|AFW71957.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 417
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 65/265 (24%), Positives = 108/265 (40%), Gaps = 68/265 (25%)
Query: 5 LAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYL----------------- 47
++A + ++G I P+ I ++ + +F Y +D+HEFL +L
Sbjct: 123 ISASKKKTG-VIAPKRFIQMVRKLNEYFRGYMHQDAHEFLNFLLNEIVDILEKESSSAKD 181
Query: 48 ------------------------IEGIHRSYLKVISGSNN--------------LELSL 69
+ +H+++ +++ +LS+
Sbjct: 182 SPGTTSSENVSNGAAVDGVRKEPLVTWVHKNFQGILTNETRCLMCETITAKDETFFDLSV 241
Query: 70 DIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY 129
DI Q SSL L FF+ E L D+ + C+KC EA K+ I+K P + ++ LKRF +
Sbjct: 242 DIEQNSSLTSCLKNFFSTETLNADDKFFCDKCCSLQEAEKRMKIKKAPQILVIHLKRFKF 301
Query: 130 LCL-----KISCAVQVPLYLEFGK---FMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSG 181
+ K+S V PL L+ C +L + V+H GS GHY + S
Sbjct: 302 IEQLNRHKKLSYRVVYPLELKLSSNSADADCEYSLFAVVVHLGSGPNQGHYVAM-IKSHD 360
Query: 182 SYHYFGDDRVQ---ASNLQQVTNAY 203
+ F DD V+ S LQ +Y
Sbjct: 361 HWLSFDDDNVEMIPESTLQTFYGSY 385
>gi|348512186|ref|XP_003443624.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Oreochromis niloticus]
gi|432928205|ref|XP_004081104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Oryzias
latipes]
Length = 372
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 110/270 (40%), Gaps = 64/270 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q I P+ I +L+ F+ Y +D+HEFL YL+ I ++
Sbjct: 92 ANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEERKQEKTNG 151
Query: 57 KVISGS-----NN-------------------------------------LELSLDIYQL 74
++ +G+ NN L+LS+D+ Q
Sbjct: 152 RLANGTLDSQNNNSNATPAPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN 211
Query: 75 SSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL---- 130
+S+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 212 TSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQLQ 271
Query: 131 -CLKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSY 183
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 272 RYTKLSYRVVFPLELRLFNTSGDATNPERLYDLVAVVVHCGSGPNRGHYIAI-VKSHDFW 330
Query: 184 HYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + E+ +S
Sbjct: 331 LLFDDDIVEKIDAQAIEEFYGLTSEISKNS 360
>gi|410908997|ref|XP_003967977.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Takifugu
rubripes]
gi|47223359|emb|CAG04220.1| unnamed protein product [Tetraodon nigroviridis]
Length = 372
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 72/270 (26%), Positives = 110/270 (40%), Gaps = 64/270 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q I P+ I +L+ F+ Y +D+HEFL YL+ I ++
Sbjct: 92 ANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEERKQEKTNG 151
Query: 57 KVISGS-----NN-------------------------------------LELSLDIYQL 74
++ +G+ NN L+LS+D+ Q
Sbjct: 152 RLANGTLDSQNNNSNATPAPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQN 211
Query: 75 SSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL---- 130
+S+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 212 TSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQLQ 271
Query: 131 -CLKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSY 183
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 272 RYTKLSYRVVFPLELRLFNTSGDATNPERLYDLVAVVVHCGSGPNRGHYIAI-VKSHDFW 330
Query: 184 HYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + E+ +S
Sbjct: 331 LLFDDDIVEKIDAQAIEEFYGLTSEISKNS 360
>gi|355727980|gb|AES09374.1| ubiquitin specific peptidase 3 [Mustela putorius furo]
Length = 472
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 117/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 174 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 233
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 234 GVSRSAILQENSALSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 293
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 294 LDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 353
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E HC +L + V+
Sbjct: 354 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPEHCLYDLAAVVV 413
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ V AY++ Y
Sbjct: 414 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEDTVVKAKAYILFY 460
>gi|119625839|gb|EAX05434.1| ubiquitin specific peptidase 46, isoform CRA_a [Homo sapiens]
Length = 250
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q +S+ L F E L + Y CE C K EA K+ ++K P++ L L
Sbjct: 80 LDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHL 139
Query: 125 KRFNYL-----CLKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L ++ R +LV+ V+H GS GHY
Sbjct: 140 KRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYI 199
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
I S G + F DD V+ + Q + Y + ++ +S
Sbjct: 200 TI-VKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNS 238
>gi|349580513|dbj|GAA25673.1| K7_Ubp8p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 471
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 97/244 (39%), Gaps = 64/244 (26%)
Query: 28 IAHHFEYYRPEDSHEFLLYLIEGIHRSYL------KVISGSNN----------------- 64
I + Y +D+HEF ++I IH+SY+ K +S +NN
Sbjct: 226 INQNLAGYSQQDAHEFWQFIINQIHQSYVLDLPNAKEVSRANNKQCECIVHTVFEGSLES 285
Query: 65 ------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTE 106
L+LSLDI L E L F KE L +D Y C +C +
Sbjct: 286 SIVCPGCQNNSKTTIDPFLDLSLDIKDKKKLYECLDSFHKKEQL-KDFNYHCGECNSTQD 344
Query: 107 ATKQFSIEKPPIVFILLLKRFNYLC----LKISCAVQVPLYL---------------EFG 147
A KQ I K P V +L LKRF +L K+ ++ P YL E G
Sbjct: 345 AIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYCSTKEKDKHSENG 404
Query: 148 KFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
K L+ V H G+ + GHY S G + F D V + + ++V AY++
Sbjct: 405 KVPDIIYELIGIVSHKGTVN-EGHYIAFCKISGGQWFKFNDSIVSSISQEEVLKEQAYLL 463
Query: 206 IYEL 209
Y +
Sbjct: 464 FYTI 467
>gi|428167496|gb|EKX36454.1| hypothetical protein GUITHDRAFT_165733 [Guillardia theta CCMP2712]
Length = 1003
Score = 68.2 bits (165), Expect = 3e-09, Method: Composition-based stats.
Identities = 65/275 (23%), Positives = 112/275 (40%), Gaps = 72/275 (26%)
Query: 38 EDSHEFLLYLIEGIHRSYL-----------KVISGSNNLELSLDIYQL------------ 74
ED+HE+L+ L+E +HR + + +S + +LEL+ I+Q+
Sbjct: 15 EDAHEYLVNLLEKLHRHHADELFPPLTCHQEWLSKNRHLELTTCIHQIFGGKICSEVRCR 74
Query: 75 ---------------------------SSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEA 107
+SL++ L Q+ +E L N Y CEKC +++A
Sbjct: 75 SCGGSSKTFDLITDLALEIQNANTLEGASLEDCLLQYTIEEQLGMSNAYLCEKCKRRSQA 134
Query: 108 TKQFSIEKPPIVFILLLKRFNYLCL---KISCAVQVPLYLEFGKFMHCRR--------NL 156
TKQ I P + ++ LKRF++ L KIS ++ P L+ ++ +L
Sbjct: 135 TKQLRIHTLPNILVVQLKRFSFWGLHGGKISRSISYPAVLDMRPYLTSPERHFNNSIYDL 194
Query: 157 VSAVIHHGSSSFSGHY------NCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY- 207
++H GSS GHY C GS++ D +L NAY++ Y
Sbjct: 195 YGVLVHEGSSLQYGHYLSYVKHAC--KHKEGSWYQMDDSHTMKVDLDTALRQNAYILFYA 252
Query: 208 ELLPSSLHHLNSSLHSSSPGSVEPRTHHRNYMAHE 242
P + + + S + T R+++ +E
Sbjct: 253 RRFPRTESLVQNESDSEDQSQSQDGTSARSHLDYE 287
>gi|195113703|ref|XP_002001407.1| GI21992 [Drosophila mojavensis]
gi|193918001|gb|EDW16868.1| GI21992 [Drosophila mojavensis]
Length = 361
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 68/270 (25%), Positives = 107/270 (39%), Gaps = 64/270 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLI------------------ 48
A Q + +I P+ I +L+ F+ Y +D+HEFL +LI
Sbjct: 78 ATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNSGKTPA 137
Query: 49 ---------------------------EGIHRSYLKVIS-------GSNNLELSLDIYQL 74
+GI S + ++ N +L +D+ Q
Sbjct: 138 AGSSATTTPIGQTNGANTEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVDVDQN 197
Query: 75 SSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC--- 131
+S+ L F E L DN ++C+ C EA K+ ++K P++ L LKRF Y+
Sbjct: 198 TSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQFN 257
Query: 132 --LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSY 183
+K+S V PL L ++ R +L + VIH GS GHY I S G +
Sbjct: 258 RHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISI-VKSHGLW 316
Query: 184 HYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V + + Y + ++ SS
Sbjct: 317 LLFDDDMVDKIEASTIEDFYGLTSDIHKSS 346
>gi|224043232|ref|XP_002192348.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Taeniopygia
guttata]
Length = 358
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 70/267 (26%), Positives = 109/267 (40%), Gaps = 61/267 (22%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I +
Sbjct: 81 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 140
Query: 57 KVISGSNN---------------------------------------LELSLDIYQLSSL 77
++ +GS + L+LS+D+ Q +S+
Sbjct: 141 RLPNGSVDSESSSPPDPTWVHEIFQGTLTNETRCLTCETVSSKDEDFLDLSVDVEQNTSI 200
Query: 78 DEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----L 132
L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 201 THCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT 260
Query: 133 KISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYF 186
K+S V PL L G + R +LV+ V+H GS GHY I S + F
Sbjct: 261 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLLF 319
Query: 187 GDDRVQASNLQQVTNAYVVIYELLPSS 213
DD V+ + Q + Y + ++ +S
Sbjct: 320 DDDIVEKIDAQAIEEFYGLTSDISKNS 346
>gi|449269690|gb|EMC80441.1| Ubiquitin carboxyl-terminal hydrolase 12, partial [Columba livia]
Length = 353
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 69/267 (25%), Positives = 106/267 (39%), Gaps = 61/267 (22%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI--------------- 51
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I
Sbjct: 76 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 135
Query: 52 --------------------HRSYLKVISGSNN--------------LELSLDIYQLSSL 77
H + ++ L+LS+D+ Q +S+
Sbjct: 136 RLPNGNIDNENKSPPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSI 195
Query: 78 DEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----L 132
L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 196 THCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT 255
Query: 133 KISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYF 186
K+S V PL L G + R +LV+ V+H GS GHY I S + F
Sbjct: 256 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLLF 314
Query: 187 GDDRVQASNLQQVTNAYVVIYELLPSS 213
DD V+ + Q + Y + ++ +S
Sbjct: 315 DDDIVEKIDAQAIEEFYGLTSDISKNS 341
>gi|384495371|gb|EIE85862.1| hypothetical protein RO3G_10572 [Rhizopus delemar RA 99-880]
Length = 493
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/244 (25%), Positives = 102/244 (41%), Gaps = 52/244 (21%)
Query: 14 SAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS------------- 60
SAI P + LK I+ + R ED+HEF ++L++ +SY + S
Sbjct: 143 SAISPNYFTSNLKKISSNLLLGRQEDAHEFFMFLLDAFTKSYTPLNSKLTPQEEDAGLVH 202
Query: 61 ------------------GSNN----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQC 98
SN+ L+LS+ I S+ AL +F + + + Y C
Sbjct: 203 TIFGGKLQSQVTCNNCKANSNSYDRFLDLSVQINGEKSIQNALSRFIEADTI---DGYNC 259
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQVPLYLEFGKFMHCR 153
+ C K A KQ + + P ++ LKRF Y KI +V+ P L+ ++
Sbjct: 260 DACKQKVRAYKQMTANEVPHNLVIHLKRFEYDMYSNGMRKIHKSVKFPETLDMAPYISKE 319
Query: 154 RNLVSA-------VIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYV 204
+ + +A ++H GSS +GHY G + D+ V ++ +V AY+
Sbjct: 320 KKVQAAEYKLYAVLVHAGSSCDAGHYFAYVKNPQGGWLLINDETVHPVSINEVLSQRAYM 379
Query: 205 VIYE 208
+ YE
Sbjct: 380 LFYE 383
>gi|443694057|gb|ELT95284.1| hypothetical protein CAPTEDRAFT_97991, partial [Capitella teleta]
Length = 841
Score = 67.8 bits (164), Expect = 4e-09, Method: Composition-based stats.
Identities = 48/145 (33%), Positives = 71/145 (48%), Gaps = 15/145 (10%)
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCLK 133
L + L FF+++ L DN+Y CEKC K + + P + + LKRF + K
Sbjct: 458 LQDCLAAFFSEDELKGDNMYSCEKCKKLRNGKKYSKVMRLPEILCIHLKRFRHEFMFSTK 517
Query: 134 ISCAVQVPLY-LEFGKFMH--CRR-----NLVSAVIHHGSSSFSGHYNCIGSTS-SGSYH 184
I+ V PL L+ G ++H C +LV+ + HHG++ GHY S ++
Sbjct: 518 INSYVSFPLENLDMGPYLHKDCENQVTTYDLVAVICHHGTAG-GGHYTSYALNHLSQQWY 576
Query: 185 YFGDDRVQASNLQQVTN--AYVVIY 207
F D V +LQQV N AYV+ Y
Sbjct: 577 EFDDQYVTEVDLQQVENCEAYVLFY 601
>gi|323307659|gb|EGA60924.1| Ubp8p [Saccharomyces cerevisiae FostersO]
Length = 471
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 96/244 (39%), Gaps = 64/244 (26%)
Query: 28 IAHHFEYYRPEDSHEFLLYLIEGIHRSYL------KVISGSNN----------------- 64
I + Y +D+HEF ++I IH+SY+ K +S +NN
Sbjct: 226 INQNLAGYSQQDAHEFWQFIINQIHQSYVLDLPNAKEVSRANNKQCECIVHTVFEGSLES 285
Query: 65 ------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTE 106
L+LSLDI L E L F KE L +D Y C +C +
Sbjct: 286 SIVCPGCQNNSKTTIDPFLDLSLDIKDKKKLYECLDSFHKKEQL-KDFNYHCGECNSTQD 344
Query: 107 ATKQFSIEKPPIVFILLLKRFNYLC----LKISCAVQVPLYL---------------EFG 147
A KQ I K P V +L LKRF +L K+ ++ P YL E G
Sbjct: 345 AIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYCSTKEKDKHSENG 404
Query: 148 KFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
K L+ V H G+ + GHY S G + F D V + + +V AY++
Sbjct: 405 KVPDIIYELIGIVSHKGTVN-EGHYIAFCKISGGQWFKFNDSMVSSISQAEVLKEQAYLL 463
Query: 206 IYEL 209
Y +
Sbjct: 464 FYTI 467
>gi|366989503|ref|XP_003674519.1| hypothetical protein NCAS_0B00580 [Naumovozyma castellii CBS 4309]
gi|342300383|emb|CCC68142.1| hypothetical protein NCAS_0B00580 [Naumovozyma castellii CBS 4309]
Length = 466
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 94/234 (40%), Gaps = 55/234 (23%)
Query: 28 IAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS---GSNN-------------------- 64
I +F Y +D+HEFL Y + +H+ Y + S NN
Sbjct: 232 INENFAGYSQQDAHEFLQYFLNQLHQDYKRDSSHNEQENNCPCVAHSIFQGELKSSIVCP 291
Query: 65 -------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQF 111
++LSLDI + L + L F KE L D Y C +C + KQF
Sbjct: 292 ECQNDSKTIIDPFMDLSLDIKDKTDLYQCLDSFHKKEKL-HDFNYHCSRCNTSLDPIKQF 350
Query: 112 SIEKPPIVFILLLKRFNYLC----LKISCAVQVPLYLEFGKFMHCRRNL----------V 157
+I K P + +L LKRF + +K++ VQ PLYL + C RN +
Sbjct: 351 TINKLPPMLVLQLKRFEHFVNGTNVKLNEFVQYPLYLNMRDY--CDRNTNQETPDIIYEL 408
Query: 158 SAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIYEL 209
+ ++ H S GHY + + G + F D + + AY++ Y +
Sbjct: 409 TGILSHIGSINEGHYVVVLKINDGRWFKFNDSMISVIKEDEALKQQAYLLFYTV 462
>gi|414865456|tpg|DAA44013.1| TPA: hypothetical protein ZEAMMB73_788400 [Zea mays]
Length = 541
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 11/137 (8%)
Query: 66 ELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLK 125
EL L+I ++L+E+L +F++E LV +N Y CE C + +AT+ + P V LK
Sbjct: 245 ELELNIKGFNNLEESLDDYFSEEGLVGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLK 304
Query: 126 RFNYLC-----LKISCAVQVPLYLEFGKFMHCRRN-----LVSAVIHHGSSSFSGHYNC- 174
R+ +L KIS + P L+ GK + + L + +IH G+++ SGHY
Sbjct: 305 RYVFLPKTTTKKKISSSFSFPGQLDMGKRLSNPTSSYTYELAAILIHKGTAANSGHYVAH 364
Query: 175 IGSTSSGSYHYFGDDRV 191
I S+G + F D+ V
Sbjct: 365 IKDESNGQWWEFDDETV 381
>gi|190408449|gb|EDV11714.1| ubiquitin carboxyl-terminal hydrolase 8 [Saccharomyces cerevisiae
RM11-1a]
gi|256271624|gb|EEU06666.1| Ubp8p [Saccharomyces cerevisiae JAY291]
gi|259148808|emb|CAY82053.1| Ubp8p [Saccharomyces cerevisiae EC1118]
gi|323303444|gb|EGA57239.1| Ubp8p [Saccharomyces cerevisiae FostersB]
gi|323332143|gb|EGA73554.1| Ubp8p [Saccharomyces cerevisiae AWRI796]
gi|323336055|gb|EGA77329.1| Ubp8p [Saccharomyces cerevisiae Vin13]
gi|323347039|gb|EGA81315.1| Ubp8p [Saccharomyces cerevisiae Lalvin QA23]
gi|323353165|gb|EGA85465.1| Ubp8p [Saccharomyces cerevisiae VL3]
Length = 471
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 96/244 (39%), Gaps = 64/244 (26%)
Query: 28 IAHHFEYYRPEDSHEFLLYLIEGIHRSYL------KVISGSNN----------------- 64
I + Y +D+HEF ++I IH+SY+ K +S +NN
Sbjct: 226 INQNLAGYSQQDAHEFWQFIINQIHQSYVLDLPNAKEVSRANNKQCECIVHTVFEGSLES 285
Query: 65 ------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTE 106
L+LSLDI L E L F KE L +D Y C +C +
Sbjct: 286 SIVCPGCQNNSKTTIDPFLDLSLDIKDKKKLYECLDSFHKKEQL-KDFNYHCGECNSTQD 344
Query: 107 ATKQFSIEKPPIVFILLLKRFNYLC----LKISCAVQVPLYL---------------EFG 147
A KQ I K P V +L LKRF +L K+ ++ P YL E G
Sbjct: 345 AIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYCSTKEKDKHSENG 404
Query: 148 KFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
K L+ V H G+ + GHY S G + F D V + + +V AY++
Sbjct: 405 KVPDIIYELIGIVSHKGTVN-EGHYIAFCKISGGQWFKFNDSMVSSISQAEVLKEQAYLL 463
Query: 206 IYEL 209
Y +
Sbjct: 464 FYTI 467
>gi|297274160|ref|XP_001117796.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Macaca
mulatta]
Length = 626
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 101/258 (39%), Gaps = 62/258 (24%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------------- 49
A Q + I P+ I +L+ F+ Y +D+HEFL YL+
Sbjct: 348 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 407
Query: 50 -------------------GIHRSYLKVISGSNN--------------LELSLDIYQLSS 76
+H + ++ L+LS+D+ Q +S
Sbjct: 408 RLPNGNIDNENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 467
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 468 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 527
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 528 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 586
Query: 186 FGDDRVQASNLQQVTNAY 203
F DD V+ + Q + Y
Sbjct: 587 FDDDIVEKIDAQAIEEFY 604
>gi|255085010|ref|XP_002504936.1| predicted protein [Micromonas sp. RCC299]
gi|226520205|gb|ACO66194.1| predicted protein [Micromonas sp. RCC299]
Length = 376
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/150 (30%), Positives = 69/150 (46%), Gaps = 12/150 (8%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
++LSLDI Q +S+ L QF + E L + +QC+ CG EA K+ ++ P V L L
Sbjct: 176 MDLSLDIEQNASVSACLKQFSSNELLASQDKFQCDACGGLQEAHKRMLVKSSPKVLALHL 235
Query: 125 KRFNYL-----------CLKISCAVQVPLYLEFGKFMHCRRNLVSAVIHHGSSSFSGHYN 173
KRF YL + +++P E L + V+H GS GHY
Sbjct: 236 KRFKYLESLGRHAKLMHRVVFPSELKIPNMTEDADGQDAAYQLFAVVVHVGSGPNHGHYV 295
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAY 203
C+ S G + + DD V+ + + N +
Sbjct: 296 CL-VKSHGQWLTYDDDTVELMDDDAMNNFF 324
>gi|414865457|tpg|DAA44014.1| TPA: hypothetical protein ZEAMMB73_788400 [Zea mays]
Length = 1073
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 45/137 (32%), Positives = 72/137 (52%), Gaps = 11/137 (8%)
Query: 66 ELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLK 125
EL L+I ++L+E+L +F++E LV +N Y CE C + +AT+ + P V LK
Sbjct: 245 ELELNIKGFNNLEESLDDYFSEEGLVGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLK 304
Query: 126 RFNYLC-----LKISCAVQVPLYLEFGKFMHCRRN-----LVSAVIHHGSSSFSGHYNC- 174
R+ +L KIS + P L+ GK + + L + +IH G+++ SGHY
Sbjct: 305 RYVFLPKTTTKKKISSSFSFPGQLDMGKRLSNPTSSYTYELAAILIHKGTAANSGHYVAH 364
Query: 175 IGSTSSGSYHYFGDDRV 191
I S+G + F D+ V
Sbjct: 365 IKDESNGQWWEFDDETV 381
>gi|109459181|ref|XP_219062.4| PREDICTED: ubiquitin carboxyl-terminal hydrolase DUB-1-like [Rattus
norvegicus]
Length = 504
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 44/231 (19%)
Query: 21 IINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN---------------- 64
++ +++ F +R ED+HEFL++ + +H S L+ S
Sbjct: 115 VMKPSEILTSTFHKHRQEDAHEFLMFTLNTMHESCLRGCKQSETTSKDSSLIYDIFGGQM 174
Query: 65 -------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKT 105
L L LDI S+ +AL E L DN Y C +C K
Sbjct: 175 RSQIKCHHCQGTLDSYDPFLNLFLDICSAQSVKQALEDLVKVEELQGDNAYYCGRCREKM 234
Query: 106 EATKQFSIEKPPIVFILLLKR-FNYLCLKISCAVQVPLYLEFGKFMHCRR------NLVS 158
A+K ++ V +L+L R +++ K++ V P YL+ ++ L +
Sbjct: 235 PASKTTKVQTASKVLLLVLNRSYDFGGDKLNRVVSYPEYLDLQPYLSQPTAGPLPYALYA 294
Query: 159 AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
++H G + SGHY C S G ++ D +V ++ V + AY++ Y
Sbjct: 295 VLVHDGVTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFY 345
>gi|303288592|ref|XP_003063584.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226454652|gb|EEH51957.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 294
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/255 (26%), Positives = 104/255 (40%), Gaps = 63/255 (24%)
Query: 16 IIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------KVISG-- 61
+ P + L L+A HF R ED+HE L +E + S L ++ G
Sbjct: 40 LTPVPVFGNLHLLARHFTRGRQEDAHELLRLCLESMDESCLLNAGRAPPTVVERIFQGAF 99
Query: 62 ------------SNNLELSLDI-----YQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYK 104
SN + LD+ ++ + +AL F +E L +N Y+CE C
Sbjct: 100 RNQVKCGACGAKSNAYDPFLDVSLELPRRVHRVRDALELFTKEETLEGENAYKCEACDAL 159
Query: 105 TEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFMH--------CRRNL 156
ATK+ +I + P V ++ LKRF+ KIS V +E M R L
Sbjct: 160 RPATKRLTIHEAPAVLVIHLKRFDLFGGKISRPVAFDDVVELSGHMSDTAVESRGPRYRL 219
Query: 157 VSAVIHHGSSSFSGHY---------------------NCIGSTSSG-SYHYFGDDRVQAS 194
+ V+H GSS GHY + G+ SSG ++ F D V+
Sbjct: 220 YAMVVHAGSSVGCGHYYAYARASGGGGGGGGAAAEEDSFYGTRSSGDDWYLFDDAVVRPV 279
Query: 195 NLQQVTN--AYVVIY 207
+ ++V + AYV+ Y
Sbjct: 280 SAREVFDDEAYVLFY 294
>gi|393213328|gb|EJC98825.1| cysteine proteinase [Fomitiporia mediterranea MF3/22]
Length = 846
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 68/259 (26%), Positives = 104/259 (40%), Gaps = 67/259 (25%)
Query: 16 IIPELIINKLKLIAHHFEYYRPEDSHEFLLYLI----EGIHRSYLKVISGSNN------- 64
+ P + KLK F +D+HEFL+YL+ E + V SGS++
Sbjct: 121 VAPRAFVEKLKKENELFRSSMHQDAHEFLIYLLNKIAEDLEEEARNVRSGSSSGEDRKTN 180
Query: 65 -----------------------------------LELSLDIYQLSSLDEALGQFFAKEY 89
L+LS+DI Q SS+ L QF A E
Sbjct: 181 SSTNSNIVHDLFEGVLTSETRCLTCETVSSRDEAFLDLSIDIEQNSSVTACLRQFSASEM 240
Query: 90 LVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---------LCLKISCAVQV 140
L + N + C+ C EA K+ I++ P V L LKRF Y L +++ +++
Sbjct: 241 LCQKNKFFCDSCCGLQEAEKRMKIKRLPNVLALHLKRFKYQEDVGKYIKLAYRVAFPLEL 300
Query: 141 PLYLEFGKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
L+ + R L + VIH G+ + GHY I S+ S+ F DD V+
Sbjct: 301 RLFNTADDAVDPDRLYELFAIVIHIGNGPYHGHYVAI-VKSNESWLVFDDDSVEKIKESD 359
Query: 199 VTN---------AYVVIYE 208
++ AYV+ Y+
Sbjct: 360 ISKYYGDSNSGAAYVLFYQ 378
>gi|336261244|ref|XP_003345413.1| hypothetical protein SMAC_04644 [Sordaria macrospora k-hell]
gi|380090667|emb|CCC11662.1| unnamed protein product [Sordaria macrospora k-hell]
Length = 860
Score = 67.4 bits (163), Expect = 4e-09, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + SS+ L +F A+E L N + C+ CG EA K+ I+K P V L L
Sbjct: 317 LDLSIDLEEHSSVTSCLRKFSAEEMLCERNKFHCDHCGGLQEAEKRMKIKKLPKVLALHL 376
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P YL + L + ++H G +++ GHY
Sbjct: 377 KRFKYTEDYSRLQKLFHRVVYPYYLRMFNTTDDAEDPDRIYELYAVIVHIGGNAYHGHYV 436
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 437 SIIKTKDRGWVLFDDEMVEPVDKNFVANFFGDKPGMACAYVLFYQ 481
>gi|109462598|ref|XP_001074163.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase DUB-1-like [Rattus
norvegicus]
Length = 504
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 55/231 (23%), Positives = 95/231 (41%), Gaps = 44/231 (19%)
Query: 21 IINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN---------------- 64
++ +++ F +R ED+HEFL++ + +H S L+ S
Sbjct: 115 VMKPSEILTSTFHKHRQEDAHEFLMFTLNTMHESCLRGCKQSETTSKDSSLIYDIFGGQM 174
Query: 65 -------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKT 105
L L LDI S+ +AL E L DN Y C +C K
Sbjct: 175 RSQIKCHHCQGTLDSYDPFLNLFLDICSAQSVKQALEDLVKVEELQGDNAYYCGRCREKM 234
Query: 106 EATKQFSIEKPPIVFILLLKR-FNYLCLKISCAVQVPLYLEFGKFMHCRR------NLVS 158
A+K ++ V +L+L R +++ K++ V P YL+ ++ L +
Sbjct: 235 PASKTTKVQTASKVLLLVLNRSYDFGGDKLNRVVSYPEYLDLQPYLSQPTAGPLPYALYA 294
Query: 159 AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
++H G + SGHY C S G ++ D +V ++ V + AY++ Y
Sbjct: 295 VLVHDGVTCSSGHYFCYVKASHGKWYKMDDSKVTRCDVSSVLSEPAYLLFY 345
>gi|195399524|ref|XP_002058369.1| GJ14347 [Drosophila virilis]
gi|194141929|gb|EDW58337.1| GJ14347 [Drosophila virilis]
Length = 363
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 69/272 (25%), Positives = 106/272 (38%), Gaps = 66/272 (24%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---------- 56
A Q + +I P+ I +L+ F+ Y +D+HEFL +LI I+ L
Sbjct: 78 ATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNTGSSTG 137
Query: 57 KVISGS--------------------------------------------NNLELSLDIY 72
K +G N +L +D+
Sbjct: 138 KTAAGGAIPGPNAQTNGANTEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVDVD 197
Query: 73 QLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC- 131
Q +S+ L F E L DN ++C+ C EA K+ ++K P++ L LKRF Y+
Sbjct: 198 QNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYMEQ 257
Query: 132 ----LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSG 181
+K+S V PL L ++ R +L + VIH GS GHY I S G
Sbjct: 258 FNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISI-VKSHG 316
Query: 182 SYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
+ F DD V + + Y + ++ SS
Sbjct: 317 LWLLFDDDMVDKIEASTIEDFYGLTSDIHKSS 348
>gi|403216293|emb|CCK70790.1| hypothetical protein KNAG_0F01220 [Kazachstania naganishii CBS
8797]
Length = 784
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 48/169 (28%), Positives = 80/169 (47%), Gaps = 21/169 (12%)
Query: 76 SLDEALGQFFAKEYLVRDNL---YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY--- 129
S+++++ FF E + DN Y CEKC T A K+ SI + P ++ LK+F +
Sbjct: 549 SIEKSIKDFFNPELIRVDNEQKGYVCEKCHKTTNAAKRNSILRAPETLLVHLKKFRFNGT 608
Query: 130 LCLKISCAVQVPLYLEFGKF------------MHCRRNLVSAVIHHGSSSFSGHYNCIGS 177
K+ AV P++L+ K+ + + L+S V+H G S SGHY
Sbjct: 609 SSSKMKQAVSYPMFLDLTKYCDKEATPKGQDVLPVKYQLISVVVHEGRSLSSGHYIAHCK 668
Query: 178 TSSGSYHYFGDD---RVQASNLQQVTNAYVVIYELLPSSLHHLNSSLHS 223
GS+ + D+ ++ ++ + +NAY ++Y L S L L S
Sbjct: 669 QPDGSWSTYDDEYINKITERDVLRESNAYYLVYTRLTSKAIKLRDDLSS 717
>gi|402222682|gb|EJU02748.1| hypothetical protein DACRYDRAFT_78606 [Dacryopinax sp. DJM-731 SS1]
Length = 900
Score = 67.4 bits (163), Expect = 5e-09, Method: Composition-based stats.
Identities = 69/274 (25%), Positives = 111/274 (40%), Gaps = 54/274 (19%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLI---------------------E 49
E + P I LK F + +D+HEFL YL+ E
Sbjct: 62 EEKGMVSPSAFIAALKKENVDFRTSQHQDAHEFLNYLLNRVAEDIDENRTRPTMVQSLFE 121
Query: 50 GIHRSYLKVIS-------GSNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G+ + + +S L+LS+DI SS+ L +F E L+ DN ++C+ C
Sbjct: 122 GLLTNETRCLSCNTVSHRDETFLDLSIDIEPNSSVTACLREFSKGEMLLEDNRFRCDHCN 181
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYL--------CLKISCAVQVPLYLEFGKFMHCRR 154
+A K+ ++ P V L LKRF Y+ K++ V PL L +
Sbjct: 182 EYCDAEKRMKVKTLPNVLALHLKRFKYIEDANRNIRPTKLTYRVAFPLELRLFDTSDDAQ 241
Query: 155 N------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGD---DRVQASNLQQV------ 199
N L + V+H G+ GHY + T G + F D D ++ S++ +
Sbjct: 242 NPDRLYELFAIVVHIGAGLAHGHYVTVVRT-QGKWVLFDDEAVDVIKESDIMKYFGDAPG 300
Query: 200 TNAYVVIYELLPSSLHHLN--SSLHSSSPGSVEP 231
YV+ Y+ + +H L LH ++P + P
Sbjct: 301 GQGYVLFYQAVDMDIHALGLPDRLHHAAPKTTIP 334
>gi|355749411|gb|EHH53810.1| hypothetical protein EGM_14513 [Macaca fascicularis]
Length = 401
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q +S+ L F E L + Y CE C K EA K+ ++K P++ L L
Sbjct: 231 LDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHL 290
Query: 125 KRFNYL-----CLKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L ++ R +LV+ V+H GS GHY
Sbjct: 291 KRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYI 350
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
I S G + F DD V+ + Q + Y + ++ +S
Sbjct: 351 TI-VKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNS 389
>gi|345319054|ref|XP_001519444.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12
[Ornithorhynchus anatinus]
Length = 368
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 72/268 (26%), Positives = 109/268 (40%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLK--- 57
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ + R K
Sbjct: 90 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTVADILQEERKQEKQNG 149
Query: 58 ------VISGSNN-----------------------------------LELSLDIYQLSS 76
+ S +NN L+LS+D+ Q +S
Sbjct: 150 RLPNGNLDSENNNSPPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 209
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 210 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 269
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 270 TKLSYRVVFPLELRLFNTSGGATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 328
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 329 FDDDIVEKIDAQAIEEFYGLTSDISKNS 356
>gi|355687430|gb|EHH26014.1| hypothetical protein EGK_15892 [Macaca mulatta]
Length = 401
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q +S+ L F E L + Y CE C K EA K+ ++K P++ L L
Sbjct: 231 LDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHL 290
Query: 125 KRFNYL-----CLKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L ++ R +LV+ V+H GS GHY
Sbjct: 291 KRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYI 350
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
I S G + F DD V+ + Q + Y + ++ +S
Sbjct: 351 TI-VKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNS 389
>gi|302697379|ref|XP_003038368.1| hypothetical protein SCHCODRAFT_63953 [Schizophyllum commune H4-8]
gi|300112065|gb|EFJ03466.1| hypothetical protein SCHCODRAFT_63953, partial [Schizophyllum
commune H4-8]
Length = 425
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/249 (27%), Positives = 97/249 (38%), Gaps = 69/249 (27%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------------------ 51
AE G+ + P I+KLK + F +D+HEFL YL+ I
Sbjct: 153 AEKGT-VAPRAFIDKLKEMNELFRSTMHQDAHEFLNYLLNKIVEEVEQQARAQPGADDST 211
Query: 52 ------------------------HRSYLKVISGSNN--------------LELSLDIYQ 73
HR + V++ L+LS+DI Q
Sbjct: 212 LAPTVLTNTASTNSGTPPEDATLVHRLFEGVLTSETRCLTCETVSSRDECFLDLSIDIEQ 271
Query: 74 LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---- 129
SS+ L QF A E L + N + C+ C EA K+ I+K P V L LKRF Y
Sbjct: 272 NSSVTACLRQFSASEMLCQKNKFFCDSCCELQEAEKRMKIKKLPNVLALHLKRFKYQEDQ 331
Query: 130 -----LCLKISCAVQVPLYLEFGKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGS 182
L +++ ++ L+ R NL + V+H G+ GHY I T G+
Sbjct: 332 QKYVKLAYRVAFPFELRLFNTVDDMDEPDRLFNLFAIVVHIGAGPHHGHYISIIKT-LGT 390
Query: 183 YHYFGDDRV 191
+ F DD V
Sbjct: 391 WLVFDDDNV 399
>gi|403255383|ref|XP_003920416.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Saimiri
boliviensis boliviensis]
Length = 413
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 106/268 (39%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------------- 49
A Q + I P+ I +L+ F+ Y +D+HEFL YL+
Sbjct: 135 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 194
Query: 50 -------------------GIHRSYLKVISGSNN--------------LELSLDIYQLSS 76
+H + ++ L+LS+D+ Q +S
Sbjct: 195 RLPNGNIDNENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 254
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 255 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 314
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 315 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 373
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 374 FDDDIVEKIDAQAIEEFYGLTSDISKNS 401
>gi|302772254|ref|XP_002969545.1| hypothetical protein SELMODRAFT_91996 [Selaginella moellendorffii]
gi|300163021|gb|EFJ29633.1| hypothetical protein SELMODRAFT_91996 [Selaginella moellendorffii]
Length = 374
Score = 67.4 bits (163), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 56/222 (25%), Positives = 95/222 (42%), Gaps = 48/222 (21%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--------------- 62
P I+++L+ I + Y R ED+HEF+ ++ + + L G
Sbjct: 147 PIKILSRLRSIGNSLGYGRQEDAHEFMRLAVDCMQKICLDEAGGETTLDARTQETTLIQH 206
Query: 63 -----------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQC 98
N L+LS+ I + SL++AL QF + E+L DN Y+C
Sbjct: 207 IFGGYLQSQVVCCQCQQRSNLYENMLDLSVGIQGNVESLEDALKQFTSPEWLDGDNKYRC 266
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN-- 155
++C A K+ S+ + P + + LKRF KI+ V P L+ +M +
Sbjct: 267 DRCNAYVRAKKRLSVHEAPNILTIALKRFQGGKFGKINKKVTFPEELDMVPYMSGTVDTP 326
Query: 156 ----LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRV 191
L + V+H ++S+ GHY C +G++ D +V
Sbjct: 327 PAYELYAVVVHVDMLNASYFGHYVCYVRAGNGAWFKVDDSKV 368
>gi|441624164|ref|XP_003270353.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Nomascus
leucogenys]
gi|3220154|gb|AAC23551.1| ubiquitin hydrolyzing enzyme I [Homo sapiens]
Length = 355
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 106/268 (39%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------------- 49
A Q + I P+ I +L+ F+ Y +D+HEFL YL+
Sbjct: 77 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 136
Query: 50 -------------------GIHRSYLKVISGSNN--------------LELSLDIYQLSS 76
+H + ++ L+LS+D+ Q +S
Sbjct: 137 RLPNGNIDNENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 196
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 197 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 256
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 257 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 315
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 316 FDDDIVEKIDAQAIEEFYGLTSDISKNS 343
>gi|297473553|ref|XP_002707829.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin specific peptidase
17-like 2-like [Bos taurus]
gi|296488783|tpg|DAA30896.1| TPA: ubiquitin specific peptidase 17-like [Bos taurus]
Length = 473
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 54/214 (25%), Positives = 88/214 (41%), Gaps = 44/214 (20%)
Query: 38 EDSHEFLLYLIEGIHRSYLKVISGSNN--------------------------------- 64
ED+HEFL++ + + + L S +
Sbjct: 111 EDAHEFLMFTLNAMQQGCLSASQPSGHASEDTTVIRQIFGGTWRSQIQCLRCLGVSDTFD 170
Query: 65 --LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFIL 122
L++SLDI S+++AL + E L DN Y C C K ATK+ ++ V +L
Sbjct: 171 PYLDISLDITAAQSVEQALRELVKPEKLDADNAYDCGVCLRKVPATKRLTLHSTSQVLVL 230
Query: 123 LLKRFNYLC-LKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCI 175
+LKRF + K + V+ P L+ + R+ L + ++H G S GHY C
Sbjct: 231 VLKRFTPVSGAKRAQEVRYPQCLDLQPYTSERKAGPLGYVLYAVLVHSGWSCERGHYFCY 290
Query: 176 GSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+G ++ D +V A + +AYV+ Y
Sbjct: 291 VRAGNGQWYKMDDAKVTACDETAALSQSAYVLFY 324
>gi|303284199|ref|XP_003061390.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226456720|gb|EEH54020.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 308
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 103/246 (41%), Gaps = 59/246 (23%)
Query: 16 IIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHR-------------------SYL 56
I P + L+ ++ F R ED+HEF L++ +H+ S++
Sbjct: 68 IAPATFVKNLRALSKTFRKGRQEDAHEFARCLLDAMHKRCVDAARPKPKEGSARSETSFV 127
Query: 57 KVISGS-------------------NNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQ 97
+ G + ++LSLD+ + S+ AL + A E L N Y+
Sbjct: 128 WQVFGGRLRSRVACKTCGKMSDTFDSFMDLSLDVARSRSVQSALKSYTAVEVLDGANKYK 187
Query: 98 CEKCGYK---TEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKFM---- 150
CE K T ATKQF+I+ P V + + + K++ V+ P L+ + M
Sbjct: 188 CEMGPGKPHMTRATKQFTIDAAPKVLTIQAR---FTRRKLNQFVEYPTRLDVSEAMSDAS 244
Query: 151 -----HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV----QASNLQQVTN 201
R +L ++H G S SGHY C S+G ++ D+ V + + L Q
Sbjct: 245 PRARGRERYSLFGVLVHSGGSMHSGHYYCYVKGSTGHWYEMDDEGVSPVSEKTALSQ--R 302
Query: 202 AYVVIY 207
AY++ Y
Sbjct: 303 AYLLFY 308
>gi|56541157|gb|AAH87530.1| LOC496173 protein, partial [Xenopus laevis]
Length = 376
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 106/268 (39%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------------- 49
A Q + I P+ I +L+ F+ Y +D+HEFL YL+
Sbjct: 98 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 157
Query: 50 -------------------GIHRSYLKVISGSNN--------------LELSLDIYQLSS 76
+H + ++ L+LS+D+ Q +S
Sbjct: 158 RIPNGNIDNENNNNTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 217
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 218 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 277
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 278 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 336
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 337 FDDDIVEKIDAQAIEEFYGLTSDISKNS 364
>gi|225465557|ref|XP_002275104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Vitis vinifera]
gi|297745125|emb|CBI38964.3| unnamed protein product [Vitis vinifera]
Length = 369
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 69/136 (50%), Gaps = 9/136 (6%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LSLDI Q SS+ L F + E L ++ + C+KC EA K+ I+KPP + ++ L
Sbjct: 197 LDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHL 256
Query: 125 KRFNYLCL-----KISCAVQVPLYLEFGKFMH---CRRNLVSAVIHHGSSSFSGHYNCIG 176
KRF Y+ K+S V PL L+ M L + V+H GS GHY +
Sbjct: 257 KRFKYMEQLGRHKKLSYRVVFPLELKLANSMEDVDSEYTLFAVVVHVGSGPNHGHYVSL- 315
Query: 177 STSSGSYHYFGDDRVQ 192
S + +F D+ V+
Sbjct: 316 VKSHNHWLFFDDENVE 331
>gi|67968614|dbj|BAE00666.1| unnamed protein product [Macaca fascicularis]
Length = 435
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 117/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 137 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 196
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 197 GVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 256
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 257 LDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 316
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E C +L + V+
Sbjct: 317 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGLESCLYDLAAVVV 376
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 377 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 423
>gi|410961062|ref|XP_003987104.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Felis catus]
Length = 503
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 118/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 205 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 264
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +SGSN L+LS
Sbjct: 265 GVSRSAILQENSALSGSNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 324
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 325 LDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 384
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPLY-LEFGKFM---------HCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL L+ ++ C +L + V+
Sbjct: 385 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVV 444
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ V AY++ Y
Sbjct: 445 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEDTVVKAKAYILFY 491
>gi|148234164|ref|NP_001089397.1| ubiquitin carboxyl-terminal hydrolase 12-A [Xenopus laevis]
gi|82177909|sp|Q52KZ6.1|UB12A_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12-A; AltName:
Full=Deubiquitinating enzyme 12-A; AltName:
Full=Ubiquitin thioesterase 12-A; AltName:
Full=Ubiquitin-specific-processing protease 12-A
gi|62825915|gb|AAH94130.1| MGC115150 protein [Xenopus laevis]
Length = 370
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 101/258 (39%), Gaps = 62/258 (24%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------------- 49
A Q + I P+ I +L+ F+ Y +D+HEFL YL+
Sbjct: 92 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 151
Query: 50 -------------------GIHRSYLKVISGSNN--------------LELSLDIYQLSS 76
+H + ++ L+LS+D+ Q +S
Sbjct: 152 RIPNGNIDNENNNSAPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 211
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 212 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 271
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 272 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 330
Query: 186 FGDDRVQASNLQQVTNAY 203
F DD V+ + Q + Y
Sbjct: 331 FDDDIVEKIDAQAIEEFY 348
>gi|397495119|ref|XP_003818408.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Pan paniscus]
Length = 361
Score = 67.0 bits (162), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 106/268 (39%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------------- 49
A Q + I P+ I +L+ F+ Y +D+HEFL YL+
Sbjct: 83 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 142
Query: 50 -------------------GIHRSYLKVISGSNN--------------LELSLDIYQLSS 76
+H + ++ L+LS+D+ Q +S
Sbjct: 143 RLPNGNIDNENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 202
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 203 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 262
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 263 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 321
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 322 FDDDIVEKIDAQAIEEFYGLTSDISKNS 349
>gi|405963602|gb|EKC29164.1| Ubiquitin carboxyl-terminal hydrolase 46 [Crassostrea gigas]
Length = 1411
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 65/251 (25%), Positives = 103/251 (41%), Gaps = 55/251 (21%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI-------HRSYLKVI 59
A Q + I P+ I +L+ F+ + +D+HEFL YL+ + + I
Sbjct: 1138 ASQKKKVGTIAPKKFITRLRKEYDLFDNFMQQDAHEFLNYLLNRVSELLQAEKQGNKGKI 1197
Query: 60 SGSNN------------------------------------LELSLDIYQLSSLDEALGQ 83
+G+ N L+LS+D+ Q +S+ L
Sbjct: 1198 NGAENQNKTEPTWVEDLFQGTFTNETRCLTCETVSSKDEDFLDLSVDVEQNTSITHCLRG 1257
Query: 84 FFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---------LCLKI 134
F + E L ++ Y CE CG K EA K+ ++K P + L LKRF Y L ++
Sbjct: 1258 FSSMETLSDEHKYYCEVCGTKQEAQKRMRVKKLPKILALHLKRFKYMEQLNRFTKLSHRV 1317
Query: 135 SCAVQVPLYLEFGKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQ 192
++ L+ + R +LV+ VIH GS+ GHY I S G + F DD V
Sbjct: 1318 LFTFELRLFETSDDAYNPDRMYDLVAVVIHIGSTLNRGHYVSI-VKSDGFWLLFDDDVVD 1376
Query: 193 ASNLQQVTNAY 203
+ + + Y
Sbjct: 1377 KIDPSAIEDFY 1387
>gi|251765111|sp|Q5M981.2|UB12B_XENLA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12-B; AltName:
Full=Deubiquitinating enzyme 12-B; AltName:
Full=Ubiquitin thioesterase 12-B; AltName:
Full=Ubiquitin-specific-processing protease 12-B
Length = 370
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 101/258 (39%), Gaps = 62/258 (24%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------------- 49
A Q + I P+ I +L+ F+ Y +D+HEFL YL+
Sbjct: 92 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 151
Query: 50 -------------------GIHRSYLKVISGSNN--------------LELSLDIYQLSS 76
+H + ++ L+LS+D+ Q +S
Sbjct: 152 RIPNGNIDNENNNNTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 211
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 212 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 271
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 272 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 330
Query: 186 FGDDRVQASNLQQVTNAY 203
F DD V+ + Q + Y
Sbjct: 331 FDDDIVEKIDAQAIEEFY 348
>gi|195621226|gb|ACG32443.1| ubiquitin carboxyl-terminal hydrolase 4 [Zea mays]
Length = 417
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 47/136 (34%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
+LS+DI Q SSL L FF+ E L D+ + C+KC EA K+ I+K P + ++ L
Sbjct: 237 FDLSVDIEQNSSLTSCLKNFFSTETLNADDKFFCDKCCSLQEAEKRMKIKKAPQILVIHL 296
Query: 125 KRFNYLCL-----KISCAVQVPLYLEFGK---FMHCRRNLVSAVIHHGSSSFSGHYNCIG 176
KRF ++ K+S V PL L+ C +L + V+H GS GHY +
Sbjct: 297 KRFKFIEQLNRHKKLSYRVVYPLELKLSSNSADADCEYSLFAVVVHLGSGPNQGHYVAM- 355
Query: 177 STSSGSYHYFGDDRVQ 192
S + F DD V+
Sbjct: 356 IKSHDHWLSFDDDNVE 371
>gi|359322364|ref|XP_003639838.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Canis
lupus familiaris]
Length = 533
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 97/223 (43%), Gaps = 49/223 (21%)
Query: 32 FEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN--------------------------- 64
F ++ ED+HE+L+++++ + ++ L S++
Sbjct: 153 FHTHKQEDAHEYLMFILDAMQQACLPEDKPSDSQHAQDSTLIQHIFGGYWRSQIQCLHCQ 212
Query: 65 ---------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
L++SLDI S+ +AL Q E L +N Y C KC K A+K ++
Sbjct: 213 SISSTLEPYLDISLDIGAAQSVSQALEQLVKPEMLEGENAYHCCKCLEKVPASKVLTLHS 272
Query: 116 PPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSF 168
V IL+LK F ++ K++ +Q P L+ + +R L + ++H G S
Sbjct: 273 CAKVLILVLKGFSDFTGNKMTKEMQYPECLDMQHSLSEQRAGPLVYVLYAVLVHAGWSCH 332
Query: 169 SGHYNCIGSTSSGSYHYFGDDRVQA----SNLQQVTNAYVVIY 207
SG Y C +G +H D +V A L+Q+ AYV+ Y
Sbjct: 333 SGRYFCFVKAGNGQWHKMDDAKVSACVVTCALRQL--AYVLFY 373
>gi|344293364|ref|XP_003418393.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Loxodonta
africana]
Length = 520
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 118/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 222 FRKTLCALWQGSPTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 281
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 282 GVSRSAILQENSTLSASNKCCINGASTVVTAIFGGVLQNEVNCLICGTESRKFDPFLDLS 341
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 342 LDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 401
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E +C +L + V+
Sbjct: 402 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVV 461
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 462 HHGSGVGSGHYTAF-ATHEGRWFHFNDSTVTLTDEETVLKAKAYILFY 508
>gi|359476454|ref|XP_002271840.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Vitis
vinifera]
Length = 940
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/240 (23%), Positives = 102/240 (42%), Gaps = 50/240 (20%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--------------- 62
P I+++L I + Y + ED+HEF+ + I+ + L G
Sbjct: 260 PINILSRLPSIGGNLGYGKQEDAHEFMRFAIDTMQSVCLDEFGGEKSVHPSSQETTLIQH 319
Query: 63 -----------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQC 98
N ++L+++I+ +SL+E L QF E+L +N+Y+C
Sbjct: 320 IFGGHLQSQVICTKCSKISNQYENMMDLTVEIHGDAASLEECLDQFTVTEWLHGENMYKC 379
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRR--- 154
+ C +A+K+ ++ P + + LKRF K++ V P L+ +M
Sbjct: 380 DGCNDYVKASKRLTVRHAPNILTIALKRFQSGRFGKLNKRVTFPETLDLSPYMSKAVVGT 439
Query: 155 ---NLVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + V+H ++SF GHY C G+++ D +V L V AY+++Y
Sbjct: 440 DVYKLYAVVVHLDMLNASFFGHYVCYTKDFGGNWYRIDDCKVTRVELDDVLSQGAYMLLY 499
>gi|320165578|gb|EFW42477.1| ubiquitin specific peptidase 12 [Capsaspora owczarzaki ATCC 30864]
Length = 451
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+DI Q SS+ L F A E L D Y CE+C EA K+ ++K P V L L
Sbjct: 239 LDLSIDIEQHSSITSCLRNFSATETLQSDQKYFCEQCCALQEAQKRMRVKKLPKVLALHL 298
Query: 125 KRFNYL-----CLKISCAVQVPLYL---EFGKFMHCRRNLVSAVIHHGSSSFSGHYNCIG 176
KRF Y+ K+ V PL L E +LVS V+H GS GHY I
Sbjct: 299 KRFKYIEELQRYRKLHHRVAFPLELRLFETSDEDSAFYDLVSIVVHVGSGPNRGHYIAI- 357
Query: 177 STSSGSYHYFGD---DRVQASNLQ 197
S G + F D D V+ SNLQ
Sbjct: 358 VKSHGYWLSFDDDYVDLVEESNLQ 381
>gi|397568230|gb|EJK46029.1| hypothetical protein THAOC_35324 [Thalassiosira oceanica]
Length = 753
Score = 67.0 bits (162), Expect = 7e-09, Method: Composition-based stats.
Identities = 67/240 (27%), Positives = 103/240 (42%), Gaps = 42/240 (17%)
Query: 9 QAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEF----------------LLYLIEGIH 52
Q S + P I + I+ Y+ ED+HEF L L +G+
Sbjct: 304 QGSSNHVVDPGSITRHVHKISPTLRPYQQEDAHEFFRSLLSALTMHGQNARLSSLFDGLL 363
Query: 53 RSYL-------KVISGSNNLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQCEKCGYK 104
S L ++ ++LSLDI +++LD AL +F +E L N C +C K
Sbjct: 364 ESSLVCQTCGKTSLTRDRYMDLSLDITGNVATLDGALEKFTEEETLSDSNKVFCSRCQLK 423
Query: 105 TEATKQFSIEKPPIVFILLLKRFNY----LCLKISCAVQVPLYLEFGKFMHCRRN----- 155
TK + P + ++ KRF Y ++S V PL LE G++M R N
Sbjct: 424 RVMTKGLRLATAPTMLVINYKRFAYDMYGRMSRLSKPVHFPLRLEIGEYM-SRANRGKPQ 482
Query: 156 ---LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQAS-NLQQV--TNAYVVIYEL 209
LV+ ++H G S GHY G Y +D V ++ +V + AYV++YE+
Sbjct: 483 PYTLVAVLVHRGRSCDRGHY--FAYVRKGKDWYLCNDSVVTKVDVSEVLKSQAYVLVYEV 540
>gi|301624586|ref|XP_002941584.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-A-like [Xenopus
(Silurana) tropicalis]
Length = 380
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 101/258 (39%), Gaps = 62/258 (24%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------------- 49
A Q + I P+ I +L+ F+ Y +D+HEFL YL+
Sbjct: 102 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 161
Query: 50 -------------------GIHRSYLKVISGSNN--------------LELSLDIYQLSS 76
+H + ++ L+LS+D+ Q +S
Sbjct: 162 RIPNGNIDNENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 221
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 222 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 281
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 282 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 340
Query: 186 FGDDRVQASNLQQVTNAY 203
F DD V+ + Q + Y
Sbjct: 341 FDDDIVEKIDAQAIEEFY 358
>gi|194680854|ref|XP_001255420.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Bos taurus]
Length = 333
Score = 67.0 bits (162), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/152 (30%), Positives = 73/152 (48%), Gaps = 9/152 (5%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L++SLDI S+++AL + E L DN Y C C K ATK+ ++ V +L+L
Sbjct: 26 LDISLDITAAQSVEQALRELVKPEKLDADNAYDCGVCLRKVPATKRLTLHSTSQVLVLVL 85
Query: 125 KRFNYLC-LKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGS 177
KRF + K + V+ P L+ + R+ L + ++H G S GHY C
Sbjct: 86 KRFTPVSGAKRAQEVRYPQCLDLQPYTSERKAGPLGYVLYAVLVHSGWSCERGHYFCYVR 145
Query: 178 TSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+G ++ D +V A + +AYV+ Y
Sbjct: 146 AGNGQWYKMDDAKVTACDETAALSQSAYVLFY 177
>gi|402877470|ref|XP_003902449.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 331
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 85/182 (46%), Gaps = 11/182 (6%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+++LDI S+ +AL Q E L +N Y C C K A+K F++ V IL+L
Sbjct: 44 LDIALDIQAAQSVKQALEQVVKPEELNGENAYHCGLCLQKAPASKTFTLHTSAKVLILVL 103
Query: 125 KRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGS 177
KRF+ + K++ VQ P L+ +M + L + ++H G S +GHY
Sbjct: 104 KRFSDVTGNKLAKNVQYPECLDIQPYMSQQNTGPLVYVLYAVLVHAGWSCHNGHYLSYVK 163
Query: 178 TSSGSYHYFGDDRVQASNLQQV--TNAYVVIYELLPSSLHHLNSSLH-SSSPGSVEPRTH 234
G ++ D V A ++ V AYV+ Y + S L + S+ PG++
Sbjct: 164 APGGQWYKMDDAEVTACSIASVLSQQAYVLFY-IQKSELERCSESVSVGREPGALGAEHK 222
Query: 235 HR 236
HR
Sbjct: 223 HR 224
>gi|301500675|ref|NP_872294.2| ubiquitin carboxyl-terminal hydrolase 12 [Homo sapiens]
gi|296203592|ref|XP_002748984.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Callithrix
jacchus]
gi|332841062|ref|XP_001135418.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Pan
troglodytes]
gi|402901626|ref|XP_003913746.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12 [Papio anubis]
gi|118572732|sp|O75317.2|UBP12_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName: Full=Ubiquitin-hydrolyzing
enzyme 1; AltName: Full=Ubiquitin-specific-processing
protease 12
gi|119628797|gb|EAX08392.1| ubiquitin specific peptidase 12, isoform CRA_a [Homo sapiens]
gi|158260393|dbj|BAF82374.1| unnamed protein product [Homo sapiens]
gi|380810518|gb|AFE77134.1| ubiquitin carboxyl-terminal hydrolase 12 [Macaca mulatta]
gi|383416533|gb|AFH31480.1| ubiquitin carboxyl-terminal hydrolase 12 [Macaca mulatta]
gi|384945814|gb|AFI36512.1| ubiquitin carboxyl-terminal hydrolase 12 [Macaca mulatta]
gi|410219534|gb|JAA06986.1| ubiquitin specific peptidase 12 [Pan troglodytes]
gi|410266420|gb|JAA21176.1| ubiquitin specific peptidase 12 [Pan troglodytes]
gi|410292612|gb|JAA24906.1| ubiquitin specific peptidase 12 [Pan troglodytes]
gi|410355297|gb|JAA44252.1| ubiquitin specific peptidase 12 [Pan troglodytes]
Length = 370
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 67/258 (25%), Positives = 101/258 (39%), Gaps = 62/258 (24%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------------- 49
A Q + I P+ I +L+ F+ Y +D+HEFL YL+
Sbjct: 92 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 151
Query: 50 -------------------GIHRSYLKVISGSNN--------------LELSLDIYQLSS 76
+H + ++ L+LS+D+ Q +S
Sbjct: 152 RLPNGNIDNENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 211
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 212 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 271
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 272 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 330
Query: 186 FGDDRVQASNLQQVTNAY 203
F DD V+ + Q + Y
Sbjct: 331 FDDDIVEKIDAQAIEEFY 348
>gi|145345991|ref|XP_001417481.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577708|gb|ABO95774.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 344
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 72/148 (48%), Gaps = 13/148 (8%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q +S+ L F AKE L +++ +QC++CG EA K+ I + P V L L
Sbjct: 172 LDLSVDVEQNTSITACLNNFSAKELLDKNDKFQCDRCGGLHEAQKRMLIHEAPKVLSLHL 231
Query: 125 KRFNYLC-----LKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y+ K++ V P L+ + N L + V+H GS GHY
Sbjct: 232 KRFKYIEALGRHAKLNHRVVFPSELKIPNLIDEAENPDASYKLFAVVVHIGSGPNHGHYV 291
Query: 174 CIGSTSSGSYHYFGD--DRVQASNLQQV 199
C + + Y D + V LQQV
Sbjct: 292 CFAKNNHRWFLYDDDCVEVVDEEQLQQV 319
>gi|426358881|ref|XP_004046718.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Gorilla gorilla gorilla]
Length = 414
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 98/234 (41%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 23 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 82
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 83 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCL 142
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K ++ V IL+LKRF+ + K++ VQ P L+ +M +
Sbjct: 143 QKAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLVYV 202
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G +GHY G ++ D V AS + AYV+ Y
Sbjct: 203 LYAVLVHAGWICHNGHYFSYVKAQEGQWYKMDDAEVTASGITSALSQQAYVLFY 256
>gi|336390086|gb|EGO31229.1| hypothetical protein SERLADRAFT_336365 [Serpula lacrymans var.
lacrymans S7.9]
Length = 272
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 65/226 (28%), Positives = 92/226 (40%), Gaps = 48/226 (21%)
Query: 15 AIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLI-------------------------- 48
+ P I+KLK + F +D+HEF YL+
Sbjct: 22 TVAPRAFIDKLKELNELFRSTMHQDAHEFSNYLLNRIVEEMEDERKHYQTAVPSGATFIH 81
Query: 49 ---EGIHRSYLKVISGSNN-------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQC 98
EGI S + ++ N L+LS+DI Q SS+ L QF A E L + N + C
Sbjct: 82 KIFEGILTSETRCLTCENVSARDESFLDLSIDIEQNSSVTACLRQFSASEMLCQKNKFFC 141
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQVPLYLEFGKFMHCR 153
+ C EA K+ I++ P V L LKRF Y +K++ V P L +
Sbjct: 142 DSCCDLQEAEKRMKIKRLPNVLALHLKRFKYQEDVQKYIKLAYRVAFPFELRLFNTVDDA 201
Query: 154 RN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
+N L + V+H G+ GHY I T G + F DD V
Sbjct: 202 QNPDRLYELFAIVVHIGTGPHHGHYVSIIRT-MGFWLIFDDDTVDT 246
>gi|58258753|ref|XP_566789.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57222926|gb|AAW40970.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 576
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 86/211 (40%), Gaps = 29/211 (13%)
Query: 26 KLIAHHFEYYRPED-SHEFLLYLIEGIHRSYLKVISGSNN--------LELSLDIYQLS- 75
+ AH PE H +Y I G V S NN L+LSLD+ +
Sbjct: 181 RKFAHTTSRDTPEKIKHTSWVYRIWGGRVRSRVVCSRCNNPSDTFDSFLDLSLDVNKQGK 240
Query: 76 -SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF--NY--- 129
S+ L F ++ L DN Y CE+C K ATK F I++ P + L LKRF NY
Sbjct: 241 KSVLGMLAGFTKEDRLEGDNKYHCERCKRKANATKSFKIDQAPPILTLHLKRFSVNYNPY 300
Query: 130 ----LCLKISCAVQVPLYLEFGKFM------HCRRNLVSAVIHHGSSSFSGHYNCIGSTS 179
K + ++ L+ +M + L H G+ GHY
Sbjct: 301 SGRARAEKFNQPIKFEQTLDIAPYMVDPASPGTKYRLFGVTCHRGTELRFGHYTSYVRGP 360
Query: 180 SGSYHYFGDDRVQASNLQQVTN---AYVVIY 207
SG + + DD V L+QV N AY++ Y
Sbjct: 361 SGQWFHADDDEVSPVQLEQVLNDKTAYLLSY 391
>gi|221502626|gb|EEE28346.1| ubiquitin specific protease, putative [Toxoplasma gondii VEG]
Length = 2560
Score = 66.6 bits (161), Expect = 8e-09, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 62/126 (49%), Gaps = 8/126 (6%)
Query: 70 DIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY 129
D+++ SL E KE L +N Y CE C K +A K I PP I++L R+++
Sbjct: 2367 DVWEGPSLQEFFDALVKKERLSGENAYACEVCKTKRDAVKWQEIVSPPAHLIVVLNRYSW 2426
Query: 130 LCL-----KISCAVQVPLYLEFGKFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
K + V V L G F + L +AVIH G+S+ SGHY C+G S +
Sbjct: 2427 SVFSNEKKKNATHVHVDGTLTIGVFTY---ELYAAVIHAGASANSGHYYCLGRRSEFPRN 2483
Query: 185 YFGDDR 190
GD++
Sbjct: 2484 GAGDNK 2489
>gi|348583073|ref|XP_003477299.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like [Cavia
porcellus]
Length = 369
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 68/268 (25%), Positives = 106/268 (39%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------------- 49
A Q + I P+ I +L+ F+ Y +D+HEFL YL+
Sbjct: 91 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 150
Query: 50 -------------------GIHRSYLKVISGSNN--------------LELSLDIYQLSS 76
+H + ++ L+LS+D+ Q +S
Sbjct: 151 RLPNGNIDNENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 210
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 211 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 270
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 271 AKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 329
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 330 FDDDIVEKIDAQAIEEFYGLTSDISKNS 357
>gi|389742087|gb|EIM83274.1| cysteine proteinase, partial [Stereum hirsutum FP-91666 SS1]
Length = 382
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 67/236 (28%), Positives = 97/236 (41%), Gaps = 62/236 (26%)
Query: 15 AIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLI------------------EG------ 50
+ P I+KLK + F +D+HEFL YL+ EG
Sbjct: 121 TVSPRAFIDKLKEVNELFRSTMHQDAHEFLNYLLNKIVEEVGVDEHHKDKDGEGEDLRTG 180
Query: 51 --------IHRSYLKVISGSNN--------------LELSLDIYQLSSLDEALGQFFAKE 88
+HR + V++ L+LS+DI Q SS+ L QF A E
Sbjct: 181 SSQDDTTLVHRLFEGVLTSETRCLTCETVSSRDESFLDLSIDIEQNSSVTACLRQFSASE 240
Query: 89 YLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----LKISCAVQVPLY 143
L + N + C+ C EA K+ I+K P V L LKRF Y +K++ V PL
Sbjct: 241 MLCQKNKFFCDSCCGLQEAEKRMKIKKLPNVLALHLKRFKYQDDVQKYIKLAYRVAFPLE 300
Query: 144 LEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCI--GSTSSGSYHYFGDDRV 191
L + ++ L + V+H G+ GHY I G T S+ F DD++
Sbjct: 301 LRLFNTVDDAQDPDRLYELFAIVVHIGNGPHHGHYITIVKGPT---SWLVFDDDKI 353
>gi|224084576|ref|XP_002307344.1| predicted protein [Populus trichocarpa]
gi|222856793|gb|EEE94340.1| predicted protein [Populus trichocarpa]
Length = 325
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/247 (25%), Positives = 106/247 (42%), Gaps = 51/247 (20%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLE---- 66
E S + P I+++L+ I R ED+HEFL Y I+ + LK +G N ++
Sbjct: 78 EGKSPLSPLGILSQLQNIGSQLGNGREEDAHEFLRYAIDAMQSVCLKE-AGVNAMDSFAE 136
Query: 67 ----------------------------------LSLDIY-QLSSLDEALGQFFAKEYLV 91
L+++I + L++AL +F + E L
Sbjct: 137 ETTLIGLTFGGYLHSKIKCMKCHYKSERQERMMDLTVEIEGNIGKLEDALRRFTSAEILD 196
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFM 150
DN YQC +C +A K+ +I + P V + LKRF K++ +++ P L+ +M
Sbjct: 197 GDNKYQCGRCKSYEKAKKKMTILEAPNVLTIALKRFQSGKFGKLNKSIRFPEILDLAPYM 256
Query: 151 HCRRN------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--T 200
+ L ++H +++FSGHY C + D V A L++V
Sbjct: 257 SGTSDKSPIYRLYGVIVHLDVMNAAFSGHYVCYVKNIQNKWFKIDDSTVTAVELERVLSK 316
Query: 201 NAYVVIY 207
AY+++Y
Sbjct: 317 GAYMLLY 323
>gi|19913514|gb|AAH26072.1| Ubiquitin specific peptidase 12 [Homo sapiens]
gi|123994797|gb|ABM85000.1| ubiquitin specific peptidase 12 [synthetic construct]
Length = 370
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 70/258 (27%), Positives = 104/258 (40%), Gaps = 62/258 (24%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYL------------------- 47
A Q + I P+ I +L+ F+ Y +D+HEFL YL
Sbjct: 92 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 151
Query: 48 --------------------IEGIHRSYL---------KVISGSNN--LELSLDIYQLSS 76
++ I + L + IS + L+LS+D+ Q +S
Sbjct: 152 RLPNGNIDNENNNSTPDPTWVDEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 211
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 212 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRY 271
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 272 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 330
Query: 186 FGDDRVQASNLQQVTNAY 203
F DD V+ + Q + Y
Sbjct: 331 FDDDIVEKIDAQAIEEFY 348
>gi|134106815|ref|XP_777949.1| hypothetical protein CNBA4180 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50260649|gb|EAL23302.1| hypothetical protein CNBA4180 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 659
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/211 (29%), Positives = 86/211 (40%), Gaps = 29/211 (13%)
Query: 26 KLIAHHFEYYRPED-SHEFLLYLIEGIHRSYLKVISGSNN--------LELSLDIYQLS- 75
+ AH PE H +Y I G V S NN L+LSLD+ +
Sbjct: 264 RKFAHTTSRDTPEKIKHTSWVYRIWGGRVRSRVVCSRCNNPSDTFDSFLDLSLDVNKQGK 323
Query: 76 -SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF--NY--- 129
S+ L F ++ L DN Y CE+C K ATK F I++ P + L LKRF NY
Sbjct: 324 KSVLGMLAGFTKEDRLEGDNKYHCERCKRKANATKSFKIDQAPPILTLHLKRFSVNYNPY 383
Query: 130 ----LCLKISCAVQVPLYLEFGKFM------HCRRNLVSAVIHHGSSSFSGHYNCIGSTS 179
K + ++ L+ +M + L H G+ GHY
Sbjct: 384 SGRARAEKFNQPIKFEQTLDIAPYMVDPASPGTKYRLFGVTCHRGTELRFGHYTSYVRGP 443
Query: 180 SGSYHYFGDDRVQASNLQQVTN---AYVVIY 207
SG + + DD V L+QV N AY++ Y
Sbjct: 444 SGQWFHADDDEVSPVQLEQVLNDKTAYLLSY 474
>gi|358395839|gb|EHK45226.1| hypothetical protein TRIATDRAFT_292767 [Trichoderma atroviride IMI
206040]
Length = 729
Score = 66.6 bits (161), Expect = 9e-09, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ +++ P V L L
Sbjct: 309 LDLSIDLEQHSSVTSCLRKFSAEEMLCERNKFHCDHCGGLQEAEKRMKVKRLPKVLTLHL 368
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G +++ GHY
Sbjct: 369 KRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTDDAEDPDRMYELYAVVVHIGGNAYHGHYV 428
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 429 SIIKTKDRGWVLFDDEMVEPVDKHFVRNFFGDKPGMATAYVLFYQ 473
>gi|251765093|sp|C0HB46.1|UBP12_SALSA RecName: Full=Ubiquitin carboxyl-terminal hydrolase 12; AltName:
Full=Deubiquitinating enzyme 12; AltName: Full=Ubiquitin
thioesterase 12; AltName:
Full=Ubiquitin-specific-processing protease 12
gi|223649014|gb|ACN11265.1| Ubiquitin carboxyl-terminal hydrolase 12 [Salmo salar]
Length = 372
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q +S+ L F E L + Y CE+C K EA K+ ++K P++ L L
Sbjct: 202 LDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHL 261
Query: 125 KRFNYL-----CLKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L G + R +LV+ V+H GS GHY
Sbjct: 262 KRFKYMEQLQRYTKLSYRVVFPLELRLFNTSGDATNPERLYDLVAVVVHCGSGPNRGHYI 321
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
I S + F DD V+ + Q + Y + E+ +S
Sbjct: 322 AI-VKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSEISKNS 360
>gi|67470089|ref|XP_651015.1| ubiquitin carboxyl-terminal hydrolase [Entamoeba histolytica
HM-1:IMSS]
gi|56467696|gb|EAL45629.1| ubiquitin carboxyl-terminal hydrolase, putative [Entamoeba
histolytica HM-1:IMSS]
gi|449708107|gb|EMD47629.1| ubiquitin carboxylterminal hydrolase, putative [Entamoeba
histolytica KU27]
Length = 642
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL----C 131
SL+ L FF + L + N ++C +CG K A ++ IE PP V ++ LKRF Y
Sbjct: 502 SLEWCLNDFFKENILGKGNEWKCSQCGKKVNARQKCIIEYPPNVLVIQLKRFRYTEHLSV 561
Query: 132 LKISCAVQVPLYLEFGKFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV 191
+K + V PL ++ +F + +++V++H + GHY S + F DD V
Sbjct: 562 VKDNSLVYFPLEIDLHQFGMVGKYRLNSVVNHRGTLNGGHYYSYCRCGS-DWFVFNDDTV 620
Query: 192 QASNLQQVT--NAYVVIYE 208
N V NA+++ YE
Sbjct: 621 TRLNTNHVVTNNAFMLFYE 639
>gi|395502639|ref|XP_003755686.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Sarcophilus
harrisii]
Length = 711
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 84/287 (29%), Positives = 117/287 (40%), Gaps = 82/287 (28%)
Query: 2 RKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE-----------G 50
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++ G
Sbjct: 414 RKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNG 473
Query: 51 IHRSYL----KVISGSNN-------------------------------------LELSL 69
+ RS + +S SN L+LSL
Sbjct: 474 VSRSVILQENSSLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSL 533
Query: 70 DIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
DI L SL + L F E L LY C KC K ++TK+F I+K
Sbjct: 534 DIPSQFRNKRSKNQENGPLCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQK 593
Query: 116 PPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVIH 162
P V L LKRF+ YL K+ V+ PL YL E C +L + V+H
Sbjct: 594 LPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVH 653
Query: 163 HGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 654 HGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 699
>gi|196016423|ref|XP_002118064.1| hypothetical protein TRIADDRAFT_33494 [Trichoplax adhaerens]
gi|190579367|gb|EDV19464.1| hypothetical protein TRIADDRAFT_33494 [Trichoplax adhaerens]
Length = 342
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 84/157 (53%), Gaps = 15/157 (9%)
Query: 66 ELSLDIYQLSSLD--EALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILL 123
+LSL I ++S++ + L F +E L DN+ C KC KT TK+ S++K P + ++
Sbjct: 179 DLSLPIPKISTITLLDCLKLFTREETLSGDNMPTCSKCKTKTVCTKKLSVQKFPQILVIH 238
Query: 124 LKRFNYL--CLKISCAVQVPL-YLEFGKF------MHCRRNLVSAVIHHGSSSFSGHYNC 174
KRF+ + K++ + P+ L+ F + C+ NL A+ +H S+ GHY
Sbjct: 239 FKRFSGIHYRTKLNTLIDFPIDKLDLLNFAGTTSTISCKYNLY-AISNHSGSTVGGHYTA 297
Query: 175 -IGSTSSGSYHYFGDDRVQ--ASNLQQVTNAYVVIYE 208
S + +++ F D RVQ +SN + + AYV+ YE
Sbjct: 298 YCKSPHTQTWYMFNDTRVQPVSSNEVKSSQAYVLFYE 334
>gi|356551761|ref|XP_003544242.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
max]
Length = 1045
Score = 66.6 bits (161), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 105/246 (42%), Gaps = 50/246 (20%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN------ 64
++ S I P I+++L+ I R ED+HEFL +E + L + SG N
Sbjct: 564 DTNSPISPVGILSQLQNIGSQLGNGREEDAHEFLRLAVETMQSVCL-MESGDNMSDSLKE 622
Query: 65 --------------------------------LELSLDIY-QLSSLDEALGQFFAKEYLV 91
++L+++I ++++L+EAL QF + E L
Sbjct: 623 ETNLMGLTFGGYLQSKIKCMKCGGKSECQERMMDLTVEIEGEITTLEEALQQFTSAETLD 682
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFM 150
+N Y C +C +A K+ ++ + P V + LKRF K++ ++ P L+ FM
Sbjct: 683 GENKYHCVRCKSYEKAKKKMTVSEAPNVLTIALKRFQSGKFGKLNKPIRFPEILDLAPFM 742
Query: 151 HCRRNLV-----SAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TN 201
+L V+H +++FSGHY C + D V A L+ V
Sbjct: 743 SGTSDLPIYRLYGVVVHLDIMNAAFSGHYVCYVKNFQSRWFKVDDSVVTAVELESVLAKG 802
Query: 202 AYVVIY 207
AY++ Y
Sbjct: 803 AYMLFY 808
>gi|308505570|ref|XP_003114968.1| CRE-USP-3 protein [Caenorhabditis remanei]
gi|308259150|gb|EFP03103.1| CRE-USP-3 protein [Caenorhabditis remanei]
Length = 547
Score = 66.6 bits (161), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/226 (29%), Positives = 93/226 (41%), Gaps = 50/226 (22%)
Query: 31 HFEYYRPEDSHEFLLYLI----------------------------EGIHRSYLKVISGS 62
F +R DSHEFL YL+ EGI +S + +
Sbjct: 316 RFRGFRQHDSHEFLRYLLDQLNTEMRKCRHLPDMPDDKVTPISKHFEGILQSSVICQTCR 375
Query: 63 NN-------LELSLDIYQLSS----LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQF 111
N ++LSLD+ +LS L + L FF KE L + +C KC K +KQ
Sbjct: 376 NCSNKMDEFMDLSLDVPRLSKARIRLSDCLDLFFQKELLEKGEKPECSKCKSKQTCSKQM 435
Query: 112 SIEKPPIVFILLLKRFNYLCLKISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHH 163
I+K P V L +KRF KI ++ P+ L F+ C +L S ++H
Sbjct: 436 FIKKLPDVLCLHIKRFRDNGGKIDTLIEFPMAGLSVDDFLTEDSDEPPCVYDLQSIIVHI 495
Query: 164 GSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVT--NAYVVIY 207
G SGHY G Y F D V+ + V+ AYV++Y
Sbjct: 496 GYGCSSGHYIAFGRRGQKWYQ-FDDTVVKPVDTSLVSKQKAYVLMY 540
>gi|379030626|ref|NP_001243798.1| inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 7
[Homo sapiens]
gi|187653908|sp|P0C7H9.1|U17L7_HUMAN RecName: Full=Inactive ubiquitin carboxyl-terminal hydrolase
17-like protein 7
Length = 530
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 58/234 (24%), Positives = 97/234 (41%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRS----------------------- 54
P +I +++A F ED+HEFL++ ++ + ++
Sbjct: 139 PGHVIQPSQVLAAGFHRGEQEDAHEFLMFTVDAMKKACLPGHKQLDHHSKDTTLIHQIFG 198
Query: 55 --------YLKVISGSNN----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
YL S+ L+++LDI S+ +AL Q + L +N Y C C
Sbjct: 199 AYWRSQIKYLHCHGVSDTFDPYLDIALDIQAAQSVKQALEQLVKPKELNGENAYHCGLCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K ++ V IL+LKRF+ + K++ VQ P + +M +
Sbjct: 259 QKAPASKTLTLPTSAKVLILVLKRFSDVTGNKLAKNVQYPKCRDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS + V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASGITSVLSQQAYVLFY 372
>gi|260949473|ref|XP_002619033.1| hypothetical protein CLUG_00192 [Clavispora lusitaniae ATCC 42720]
gi|238846605|gb|EEQ36069.1| hypothetical protein CLUG_00192 [Clavispora lusitaniae ATCC 42720]
Length = 650
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/248 (22%), Positives = 107/248 (43%), Gaps = 55/248 (22%)
Query: 16 IIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------KVISGSN 63
+ P+ ++ +L I ++ EDSHE+L+ L+ + + G
Sbjct: 375 VNPKRLVQRLGDINCMMSEWQQEDSHEYLMSLMARLQEDSTPKGRKLAESVVYDIFGGVL 434
Query: 64 NLEL-----------SLDIYQLS-------------SLDEALGQFFAKEYLVRD-----N 94
+ E+ + Y LS S+++++ FF++E + RD +
Sbjct: 435 DQEVVCQQCGGVSTTKQEFYDLSLGLRKRRAEGGRYSIEKSIADFFSRETIKRDAADAAS 494
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCLKISCAVQVPLYLEFGKFM- 150
Y CE+C +T ATK+ ++ + P ++ +KRF + K+ V YL+ +M
Sbjct: 495 GYHCERCQQRTVATKKSTVAEAPQTLVVHVKRFKFNGNSSAKVKQPVAYTKYLDLTPYMT 554
Query: 151 ---HCRRNLVSAVIHHGSSSFSGHY--NCIGSTSSGSYHYFGDDRVQASNLQQVTN---A 202
CR L++ ++H G S SGHY +C+ G++ + D+ + + N A
Sbjct: 555 SGSECRYQLLAVIVHEGRSMSSGHYVAHCL--QPDGTWATYDDEYINQIAERDALNDPAA 612
Query: 203 YVVIYELL 210
Y ++Y L
Sbjct: 613 YCLVYTRL 620
>gi|168011115|ref|XP_001758249.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690705|gb|EDQ77071.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 430
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 66/255 (25%), Positives = 112/255 (43%), Gaps = 56/255 (21%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISG---------------- 61
P I++ L I ++ ED+HEF++ I + L G
Sbjct: 161 PSNILSHLSNIGRGLDFGNQEDAHEFMISAIHLMQSICLDGAGGENAVDACTEETTLIHH 220
Query: 62 ------------------SNNLELSLDIY-----QLSSLDEALGQFFAKEYLVRDNLYQC 98
SN+ E+ +D+ + SL++AL QF A E+L +N Y+C
Sbjct: 221 IFGGLLQSQVTCKQCRHQSNSYEIMMDLTVEINRNVRSLEDALAQFSAHEFLHGENKYKC 280
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFN---YLCLKISCAVQVPLYLEFGKFMHCRR- 154
++C +A K+ ++ + P V ++ LKRF Y K++ V P L+ +M
Sbjct: 281 DRCDAYVDAYKRIAVHEAPNVLVVTLKRFKGGRY--EKLTKEVVFPEILDLTPYMSENGD 338
Query: 155 -----NLVSAVIHHGSSSFS--GHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVV 205
NL + V+H S+ S GHY C+ S ++ D +V ++ VT+ AY++
Sbjct: 339 RPPHYNLYAVVVHVNESNASHYGHYFCLVMNPSSHWYRVDDMKVTEVSVNWVTSQEAYIL 398
Query: 206 IYELLPSSLHHLNSS 220
+Y+ SS +LN S
Sbjct: 399 LYK--RSSFSNLNLS 411
>gi|255713968|ref|XP_002553266.1| KLTH0D12760p [Lachancea thermotolerans]
gi|238934646|emb|CAR22828.1| KLTH0D12760p [Lachancea thermotolerans CBS 6340]
Length = 453
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 60/224 (26%), Positives = 89/224 (39%), Gaps = 53/224 (23%)
Query: 35 YRPEDSHEFLLYLIEGIHRSYLKVI-------------------------------SGSN 63
Y +D+HEFL + + +H +++V GSN
Sbjct: 226 YSQQDAHEFLQFFLNQLHADHVRVAQTNVKAENCNCILHTAFQGSLRSSILCTDCQDGSN 285
Query: 64 -----NLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPI 118
++LSLDI S+L E L F E L N + C CG KQ +I K P
Sbjct: 286 ITFDPMMDLSLDIKNKSTLVECLQSFHKGERLTDFN-HHCSSCGSVQNPIKQMTIAKLPP 344
Query: 119 VFILLLKRFNYLC----LKISCAVQVPLYLEFGKFMHCRR---------NLVSAVIHHGS 165
V +L LKRF +L +K++ + P YL F H LV+ + GS
Sbjct: 345 VLVLQLKRFEHLMNGNNVKLNGEITYPAYLNMAPFCHHSEARSVPDMVYELVAVISQEGS 404
Query: 166 SSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+ GHY C+ G + F D + + + V AY++ Y
Sbjct: 405 VN-QGHYTCMCKVPGGQWFRFNDTMIVSITEEDVLRQQAYLLFY 447
>gi|167386813|ref|XP_001737912.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165899097|gb|EDR25783.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 158
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 7/139 (5%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL----C 131
SL+ L FF + L + N ++C +CG K A ++ IE PP V ++ LKRF Y
Sbjct: 18 SLEWCLNDFFKENMLGKGNEWKCSQCGKKVNARQKCIIEYPPNVLVIQLKRFRYTEHLSV 77
Query: 132 LKISCAVQVPLYLEFGKFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV 191
+K + + L ++ +F + +++V++H + +GHY S + F DD V
Sbjct: 78 VKDNSLIYFSLEIDLRRFGMLGKYRLNSVVNHRGTLNNGHYYSYCRCGS-EWFVFNDDTV 136
Query: 192 QASNLQQV--TNAYVVIYE 208
+ N Q+ NA+++ YE
Sbjct: 137 TSLNTNQIVTNNAFMLFYE 155
>gi|356554161|ref|XP_003545417.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 729
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 50/246 (20%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--------- 62
S A P I+++L I Y R ED+HEF+ + I+ + L G
Sbjct: 241 SSQAFSPMNILSRLPNIGGTLGYGRQEDAHEFMRFSIDTMQSVCLDEFGGEKAVPPNLQE 300
Query: 63 -----------------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLVR 92
N ++L+++I+ +SL+E L QF A+E L
Sbjct: 301 TTLIQHIFGGRLQSEVICTKCNKISNQYENMMDLTVEIHGDAASLEECLDQFTARERLDG 360
Query: 93 DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMH 151
+N+Y+CE C +A K+ +++ P + + LKRF K++ + P L +M
Sbjct: 361 ENMYKCEGCKDYVKAWKRLTVKCAPNILTIALKRFQSGRFGKLNKRISFPETLNLSPYMS 420
Query: 152 CRRN------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN-- 201
+ L V+H ++SF GHY C G+++ D +V +++V +
Sbjct: 421 EAGDGSDIYKLYGVVVHIDMLNASFFGHYICYIKDFQGNWYRIDDWKVMTVEVEEVLSQG 480
Query: 202 AYVVIY 207
AY+++Y
Sbjct: 481 AYMLLY 486
>gi|50291547|ref|XP_448206.1| hypothetical protein [Candida glabrata CBS 138]
gi|49527517|emb|CAG61157.1| unnamed protein product [Candida glabrata]
Length = 771
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 50/170 (29%), Positives = 78/170 (45%), Gaps = 16/170 (9%)
Query: 76 SLDEALGQFFAKEYLVRDNL---YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY--- 129
S+++++ FF E + D Y CEKC T A K+ SI + P ++ LK+F +
Sbjct: 571 SIEKSIRDFFNPELIKVDKEKKGYVCEKCHKTTNALKRNSILRAPETLLVHLKKFRFNGT 630
Query: 130 LCLKISCAVQVPLYL-------EFGKFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGS 182
K+ AV P++L E K + + L+S V+H G S SGHY GS
Sbjct: 631 SSSKMKQAVSYPMFLDMTEYCEESKKMLPVKYELLSVVVHEGRSLSSGHYIAHCKQPDGS 690
Query: 183 YHYFGDDRVQASNLQQV---TNAYVVIYELLPSSLHHLNSSLHSSSPGSV 229
+ + D+ + ++V NAY V+Y L LN S+P +
Sbjct: 691 WATYDDEYINKITEREVLKERNAYYVLYTRLTPKSVQLNEPKKQSTPNPI 740
>gi|290993516|ref|XP_002679379.1| predicted protein [Naegleria gruberi]
gi|284092995|gb|EFC46635.1| predicted protein [Naegleria gruberi]
Length = 365
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/134 (32%), Positives = 64/134 (47%), Gaps = 8/134 (5%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ + L F + L +N + C++C EA I++ P V + L
Sbjct: 193 LDLSVDVQQYSSITQCLKNFSGMQILKSNNKFYCDRCCSHQEAQTSMKIKRQPQVLAIQL 252
Query: 125 KRFNYLC---LKISCAVQVPLYLEFGKFMHCRR----NLVSAVIHHGSSSFSGHYNCIGS 177
KRF Y+ K+S V P + + L +AV+H GS GHY CI
Sbjct: 253 KRFKYMNNNFKKLSYRVTFPFDFKLPNLSQDEKVKTYKLFAAVVHIGSGPNCGHYKCI-I 311
Query: 178 TSSGSYHYFGDDRV 191
S + F DD+V
Sbjct: 312 RSEERWFLFDDDKV 325
>gi|126277020|ref|XP_001366252.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Monodelphis
domestica]
Length = 520
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 117/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 222 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 281
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 282 GVSRSVILQENSSLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 341
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI L SL + L F E L LY C KC K ++TK+F I+
Sbjct: 342 LDIPSQFRNKRSKNQENGPLCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 401
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E C +L + V+
Sbjct: 402 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVV 461
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 462 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|50554945|ref|XP_504881.1| YALI0F01903p [Yarrowia lipolytica]
gi|49650751|emb|CAG77683.1| YALI0F01903p [Yarrowia lipolytica CLIB122]
Length = 826
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 71/261 (27%), Positives = 104/261 (39%), Gaps = 55/261 (21%)
Query: 3 KTLAACQAESGSAI---IPELIINKLKLIAHHFEYYRPEDSHEFLLYLI----------- 48
K + C +E+ S I P +I LK F +D+HEFL +L+
Sbjct: 338 KDIFECMSENSSRIGIMSPSNLITVLKRENELFRSSMHQDAHEFLNFLLNEVIESVDGSS 397
Query: 49 -------------EGIHRSYLKVIS-------GSNNLELSLDIYQLSSLDEALGQFFAKE 88
EG S K ++ + L+LS+D+ + SS+ L QF A E
Sbjct: 398 ASRDDSKWIHELFEGSLTSETKCLTCESVSRRHESFLDLSIDLERNSSVTACLRQFSASE 457
Query: 89 YLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQVPLY 143
L N + C+ C EA K+ I++ P V L LKRF + K+ V P Y
Sbjct: 458 MLCERNKFHCDTCCGLQEAEKRMKIQRLPKVLALHLKRFKFTEDMQRNTKLFHRVVYPKY 517
Query: 144 LE-FGKFMHCRR-----NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQ 197
L F C L + V+H G + GHY + T + F D+ V+A +
Sbjct: 518 LRMFETTFDCPDPDKLYELYAVVVHIGGGPYHGHYVSVVKTEHAGWLLFDDEMVEAVDPH 577
Query: 198 QVTN----------AYVVIYE 208
V N AYV+ Y+
Sbjct: 578 YVFNFFGDNRGLASAYVLFYQ 598
>gi|366995313|ref|XP_003677420.1| hypothetical protein NCAS_0G01800 [Naumovozyma castellii CBS 4309]
gi|342303289|emb|CCC71067.1| hypothetical protein NCAS_0G01800 [Naumovozyma castellii CBS 4309]
Length = 875
Score = 66.2 bits (160), Expect = 1e-08, Method: Composition-based stats.
Identities = 51/167 (30%), Positives = 82/167 (49%), Gaps = 22/167 (13%)
Query: 70 DIYQLS---SLDEALGQFFAKEYLVRDNL---YQCEKCGYKTEATKQFSIEKPPIVFILL 123
D QLS S+++++ FF E + D Y CEKC T ATK+ SI + P ++
Sbjct: 589 DASQLSKRFSIEKSIKDFFNPELIRVDKEKKGYVCEKCHKTTNATKRSSILRAPETLLVH 648
Query: 124 LKRFNY---LCLKISCAVQVPLYLEFGKF---------MHCRRNLVSAVIHHGSSSFSGH 171
LK+F + K+ AV P+YL+ ++ + + L+S V+H G S SGH
Sbjct: 649 LKKFRFNGTTSSKMKQAVSYPMYLDMTEYCETPSGTKQLPVKYELLSVVVHEGRSLSSGH 708
Query: 172 YNCIGSTSSGSYHYFGDD---RVQASNLQQVTNAYVVIY-ELLPSSL 214
Y GS+ + D+ ++ N+ + NAY ++Y L P S+
Sbjct: 709 YIAHCRQPDGSWATYDDEYINKISELNVLKEANAYYLLYTRLTPRSI 755
>gi|297742807|emb|CBI35523.3| unnamed protein product [Vitis vinifera]
Length = 723
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 94/223 (42%), Gaps = 45/223 (20%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK------------- 57
E S + P I+++++ I H + R ED+HEFL Y ++ + LK
Sbjct: 423 EGKSPLSPMGILSQIQRIGSHLGHGREEDAHEFLRYAVDTMQSVCLKDTGVVGPLAEDTT 482
Query: 58 ----VISG--------------SNNLELSLDIY-----QLSSLDEALGQFFAKEYLVRDN 94
G S E +D+ + +L+EAL QF A E L +N
Sbjct: 483 LVGLTFGGYLLSKIKCMKCRGKSERCERMMDLTVEIDGDIGTLEEALAQFTATEILDGEN 542
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCR 153
YQC +C +A K+ + + P + ++LKRF K++ +V+ P L +M
Sbjct: 543 KYQCGRCRSYEKAKKKLMVLEAPNILTIVLKRFQSSNFGKLNKSVRFPETLNMTPYMSGT 602
Query: 154 RN------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGD 188
+ L + V+H +++FSGHY C G + D
Sbjct: 603 DDRYPVYSLYAVVVHLDIMNAAFSGHYVCFVKNFLGDWFRIDD 645
>gi|395745204|ref|XP_003780559.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 12 [Pongo abelii]
Length = 362
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 67/269 (24%), Positives = 106/269 (39%), Gaps = 63/269 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------------- 49
A Q + I P+ I +L+ F+ Y +D+HEFL YL+
Sbjct: 83 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 142
Query: 50 -------------------GIHRSYLKVISGSNN---------------LELSLDIYQLS 75
+H + ++ ++LS+D+ Q +
Sbjct: 143 RLPNGNIDNENNNSTPDPTWVHEIFQGTLTNETRCLTCETISSTKMKIFIDLSVDVQQNT 202
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC---- 131
S+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 203 SITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHR 262
Query: 132 -LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 263 YTKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWL 321
Query: 185 YFGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 322 LFDDDIVEKIDAQAIEEFYGLTSDISKNS 350
>gi|307174453|gb|EFN64948.1| Ubiquitin carboxyl-terminal hydrolase 48 [Camponotus floridanus]
Length = 919
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 40/134 (29%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Query: 69 LDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFN 128
LD+ ++L EA+ ++ ++E L N Y C C K +A + +E P + L RF
Sbjct: 239 LDLQLAATLKEAIDKYLSEEQLTGANQYHCVTCSDKKDARRFIRLESLPETLNIQLMRFV 298
Query: 129 Y-----LCLKISCAVQVPLYLEFGKFMHCR-----RNLVSAVIHHGSSSFSGHYNCIGST 178
+ K++ +Q P L+ +++ C+ NLV+ + H G S+ SGHY
Sbjct: 299 FHRDSGQKKKLNSYIQFPEDLDMSEYVRCQPQTHLYNLVAVLSHKGPSAHSGHYIANICN 358
Query: 179 SSGSYHYFGDDRVQ 192
SSG ++ F DD+V+
Sbjct: 359 SSGEWYQFSDDKVE 372
>gi|395746826|ref|XP_003778518.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
Length = 498
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 117/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 200 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 259
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 260 GVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 319
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 320 LDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 379
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E C +L + V+
Sbjct: 380 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVV 439
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 440 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 486
>gi|440636366|gb|ELR06285.1| hypothetical protein GMDG_02079 [Geomyces destructans 20631-21]
Length = 761
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
++LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P + L L
Sbjct: 321 IDLSIDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPKILTLHL 380
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G +++ GHY
Sbjct: 381 KRFKYTEDMTRLQKLFHRVVYPYHLRMFNTTDDAEDPDRLYELYAVVVHIGGNAYHGHYI 440
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 441 SIIKTQDRGWLLFDDEMVEPVDKHYVRNFFGDKPGMACAYVLFYQ 485
>gi|332235883|ref|XP_003267134.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
[Nomascus leucogenys]
Length = 498
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 117/287 (40%), Gaps = 82/287 (28%)
Query: 2 RKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE-----------G 50
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++ G
Sbjct: 201 RKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNG 260
Query: 51 IHRSYL----KVISGSNN-------------------------------------LELSL 69
+ RS + +S SN L+LSL
Sbjct: 261 VSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSL 320
Query: 70 DIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
DI + SL + L F E L LY C KC K ++TK+F I+K
Sbjct: 321 DIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQK 380
Query: 116 PPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVIH 162
P V L LKRF+ YL K+ V+ PL YL E C +L + V+H
Sbjct: 381 LPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVH 440
Query: 163 HGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 441 HGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 486
>gi|242065518|ref|XP_002454048.1| hypothetical protein SORBIDRAFT_04g023700 [Sorghum bicolor]
gi|241933879|gb|EES07024.1| hypothetical protein SORBIDRAFT_04g023700 [Sorghum bicolor]
Length = 419
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 62/253 (24%), Positives = 100/253 (39%), Gaps = 67/253 (26%)
Query: 5 LAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYL----------------- 47
++A + ++G I P+ I ++ + +F Y +D+HEFL +L
Sbjct: 123 ISASKKKTG-VIAPKRFIQMVRKLNEYFRGYMHQDAHEFLNFLLNEIVDILEKESSSAKD 181
Query: 48 ------------------------IEGIHRSYLKVISGSNN--------------LELSL 69
+ +H+S+ ++ +LS+
Sbjct: 182 SPGTTSPEKVSNGATVDEVRKEPLVTWVHKSFQGTLTNETRCLMCETITAKDETFFDLSV 241
Query: 70 DIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY 129
DI Q SSL L FF+ E L D+ + C+KC EA K+ I+K P ++ LKRF +
Sbjct: 242 DIEQNSSLTSCLKNFFSTETLNADDKFFCDKCCSLQEAEKRMKIKKVPQTLVIHLKRFKF 301
Query: 130 L-----CLKISCAVQVPLYLEF-----GKFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTS 179
+ K+S V PL L+ C +L + V+H GS GHY S
Sbjct: 302 IEQLNRNKKLSYRVVYPLELKLSSSSSDAVADCEYSLFAVVVHLGSGPNQGHY-VAKIKS 360
Query: 180 SGSYHYFGDDRVQ 192
+ F DD V+
Sbjct: 361 HDHWLSFDDDNVE 373
>gi|145496599|ref|XP_001434290.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124401414|emb|CAK66893.1| unnamed protein product [Paramecium tetraurelia]
Length = 532
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 61/216 (28%), Positives = 95/216 (43%), Gaps = 38/216 (17%)
Query: 26 KLIAHHFEYYRPEDSHEFLLYLIEGIHR-----SYLKVISG------------------- 61
KLI + F D EFL YL E +++ Y + I+
Sbjct: 315 KLIKNQFAPNLQHDCQEFLCYLTEQLNKELKQNKYDQAITEILFQGQMMQQIQCHKCKQT 374
Query: 62 ----SNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPP 117
+ ELSL + + L + L QFFA+E L D+ Y C +C T+A K++ I P
Sbjct: 375 SSKFESFFELSLSMNNMKGLKQCLSQFFAQEVL--DDDYMCNQCNRTTKAIKKYMIGTAP 432
Query: 118 IVFILLLKRFNYLCLKISCAVQVPLYLEFGKF--MHCRRNLVSAVIHHGSSSFSGHY-NC 174
I+ LKRF K+ ++ L+ +F + + L S ++H+G+ GHY N
Sbjct: 433 QFLIIHLKRFQE--KKLHNYIEFQNNLDITEFCSVKAQYKLKSVIVHYGTQE-KGHYVNF 489
Query: 175 IGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIYE 208
++YF D RVQ + Q V AY++ +E
Sbjct: 490 SKIQVQLKWYYFDDHRVQFAREQDVLRQQAYILFFE 525
>gi|426379399|ref|XP_004056385.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gorilla gorilla
gorilla]
Length = 724
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 117/287 (40%), Gaps = 82/287 (28%)
Query: 2 RKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE-----------G 50
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++ G
Sbjct: 427 RKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNG 486
Query: 51 IHRSYL----KVISGSNN-------------------------------------LELSL 69
+ RS + +S SN L+LSL
Sbjct: 487 VSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSL 546
Query: 70 DIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
DI + SL + L F E L LY C KC K ++TK+F I+K
Sbjct: 547 DIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQK 606
Query: 116 PPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVIH 162
P V L LKRF+ YL K+ V+ PL YL E C +L + V+H
Sbjct: 607 LPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVH 666
Query: 163 HGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 667 HGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 712
>gi|357117231|ref|XP_003560376.1| PREDICTED: uncharacterized protein LOC100846465 [Brachypodium
distachyon]
Length = 1046
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 56/239 (23%), Positives = 102/239 (42%), Gaps = 49/239 (20%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--------------- 62
P I++ L I + + + ED+HEF+ + I+ + + L G
Sbjct: 269 PMKILSHLPNIGGNLGFGKQEDAHEFMRFAIDKMQSACLDEFGGEKVVDLSIQETTIIQH 328
Query: 63 -----------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQC 98
N ++L+++I+ SL+E L QF A E+L DN Y+C
Sbjct: 329 IFGGRLRSQVQCTACGMVSNRYENMMDLTVEIHGDAESLEECLNQFTAVEWLDGDNKYRC 388
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRR--- 154
+ C +A K ++ + P + + LKRF K++ V P L+ ++M
Sbjct: 389 DGCSDYVKAQKHLTVHQAPNILTITLKRFQSGRYGKLNKRVTFPTKLDLTRYMSTTDGSD 448
Query: 155 --NLVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+L + V+H ++S+ GHY C G + D +V + ++V AY+++Y
Sbjct: 449 QYDLYAVVVHLDMMNASYFGHYICYIKDFRGRWRKVDDCKVMIVDEEEVHAQGAYMLLY 507
>gi|114657520|ref|XP_001173962.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pan
troglodytes]
Length = 498
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 117/287 (40%), Gaps = 82/287 (28%)
Query: 2 RKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE-----------G 50
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++ G
Sbjct: 201 RKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNG 260
Query: 51 IHRSYL----KVISGSNN-------------------------------------LELSL 69
+ RS + +S SN L+LSL
Sbjct: 261 VSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSL 320
Query: 70 DIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
DI + SL + L F E L LY C KC K ++TK+F I+K
Sbjct: 321 DIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQK 380
Query: 116 PPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVIH 162
P V L LKRF+ YL K+ V+ PL YL E C +L + V+H
Sbjct: 381 LPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVH 440
Query: 163 HGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 441 HGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 486
>gi|66801727|ref|XP_629788.1| hypothetical protein DDB_G0292046 [Dictyostelium discoideum AX4]
gi|60463186|gb|EAL61379.1| hypothetical protein DDB_G0292046 [Dictyostelium discoideum AX4]
Length = 3240
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 73/154 (47%), Gaps = 27/154 (17%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L LS+D+ S+ E++ F +E+LV DN Y+CE C + +A K+ IEK P IL +
Sbjct: 2389 LSLSMDVKNKRSIAESMASFVDEEFLVGDNKYKCESCDSRVDAIKRTLIEKLPNTLILHM 2448
Query: 125 KRFNYLCL-----KISCAVQVPLYLEFGKFM--------------------HCRRNLVSA 159
KRF + K++ + P+ L+ +F R +L
Sbjct: 2449 KRFEFDLDTMRNNKLNDFYEFPMLLDIEQFTVESVERREKNNILMTSIDPNQYRYSLSGI 2508
Query: 160 VIHHGSSSFSGHY-NCIGSTSSGSYHYFGDDRVQ 192
V+H G++ SGHY I +++G++ D VQ
Sbjct: 2509 VLHQGTAD-SGHYFTLIKDSTNGNWFELNDTLVQ 2541
>gi|380798287|gb|AFE71019.1| ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
Length = 491
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 117/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 193 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 252
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 253 GVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 312
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 313 LDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 372
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E C +L + V+
Sbjct: 373 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVV 432
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 433 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 479
>gi|385303854|gb|EIF47904.1| ubiquitin carboxyl-terminal hydrolase [Dekkera bruxellensis
AWRI1499]
Length = 375
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/168 (30%), Positives = 82/168 (48%), Gaps = 19/168 (11%)
Query: 57 KVISGSNNLELSLDIYQ----LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFS 112
K ++ L+LSL+I + L +LD L +F E L D L+ C +C KT TKQ
Sbjct: 204 KHVTXDPMLDLSLEIRERNESLKTLDXCLQKFTKPEKL--DILFSCPRCAKKTGVTKQLQ 261
Query: 113 IEKPPIVFILLLKRFNYLCL--KISCAVQVPLYLEFGKF-MHCRRNLVS--------AVI 161
I K P + LKRF ++ + K+ V +PL L+ K+ + +RN S AV+
Sbjct: 262 IRKLPPTLCIQLKRFEHVNVSTKLEAHVDIPLILDMSKYTLDGKRNGDSGSDLYELYAVV 321
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+H + +GHY + G + F D V + + V + AY++ Y
Sbjct: 322 YHIGNVNTGHYISLVKDRDGMWFKFDDSHVVRVSEKDVLASQAYLLFY 369
>gi|388453361|ref|NP_001252999.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
gi|383423389|gb|AFH34908.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
gi|384939762|gb|AFI33486.1| ubiquitin carboxyl-terminal hydrolase 3 [Macaca mulatta]
Length = 520
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 117/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 222 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 281
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 282 GVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 341
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 342 LDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 401
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E C +L + V+
Sbjct: 402 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVV 461
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 462 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|410212190|gb|JAA03314.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410255768|gb|JAA15851.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410292238|gb|JAA24719.1| ubiquitin specific peptidase 3 [Pan troglodytes]
gi|410334293|gb|JAA36093.1| ubiquitin specific peptidase 3 [Pan troglodytes]
Length = 520
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 117/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 222 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 281
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 282 GVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 341
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 342 LDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 401
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E C +L + V+
Sbjct: 402 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVV 461
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 462 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|297696821|ref|XP_002825578.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3 [Pongo
abelii]
Length = 520
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 117/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 222 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 281
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 282 GVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 341
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 342 LDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 401
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E C +L + V+
Sbjct: 402 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVV 461
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 462 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|237842393|ref|XP_002370494.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
gi|211968158|gb|EEB03354.1| hypothetical protein, conserved [Toxoplasma gondii ME49]
Length = 2530
Score = 65.9 bits (159), Expect = 1e-08, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 70 DIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY 129
D+++ SL E KE L +N Y CE C K +A K I PP I++L R+++
Sbjct: 2337 DVWEGPSLQEFFDALVKKERLCGENAYACEVCKTKRDAVKWQEIVSPPAHLIVVLNRYSW 2396
Query: 130 LCL-----KISCAVQVPLYLEFGKFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
K V V L G F + L +AVIH G+S+ SGHY C+G S +
Sbjct: 2397 SVFSNEKKKNVTHVHVDGTLTIGVFTY---ELYAAVIHAGASANSGHYYCLGRRSEFPRN 2453
Query: 185 YFGDDR 190
GD++
Sbjct: 2454 GAGDNK 2459
>gi|226531818|ref|NP_001142184.1| uncharacterized protein LOC100274352 [Zea mays]
gi|194703162|gb|ACF85665.1| unknown [Zea mays]
gi|194707512|gb|ACF87840.1| unknown [Zea mays]
gi|414865257|tpg|DAA43814.1| TPA: putative ubiquitin carboxyl-terminal hydrolase superfamily
protein [Zea mays]
Length = 366
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 80/171 (46%), Gaps = 29/171 (16%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
+LSLDI Q SSL L F + E L ++ + C+KC EA K+ I+KPP + ++ L
Sbjct: 196 FDLSLDIEQNSSLTSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPNILVIHL 255
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L K ++ N L + V+H GS GHY
Sbjct: 256 KRFKYIEQLQRYKKLSYRVVFPLEL---KLLNTVDNSDLEYSLFAVVVHVGSGPNHGHYI 312
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQV--------------TNAYVVIYELL 210
+ S + +F D+ V+ ++ V N Y++ YE L
Sbjct: 313 SL-VKSHNHWLFFDDENVEMTDESMVQAFFGSPQEFSGNTDNGYILFYESL 362
>gi|29165728|gb|AAH49274.1| Ubiquitin specific peptidase 12 [Mus musculus]
Length = 250
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q +S+ L F E L + Y CE+C K EA K+ ++K P++ L L
Sbjct: 80 LDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPLILALHL 139
Query: 125 KRFNYLC-----LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L G + R +LV+ V+H GS GHY
Sbjct: 140 KRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYI 199
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
I S + F DD V+ + Q + Y + ++ +S
Sbjct: 200 AI-VKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNS 238
>gi|395746828|ref|XP_003778519.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Pongo abelii]
Length = 431
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 117/287 (40%), Gaps = 82/287 (28%)
Query: 2 RKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE-----------G 50
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++ G
Sbjct: 134 RKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNG 193
Query: 51 IHRSYL----KVISGSNN-------------------------------------LELSL 69
+ RS + +S SN L+LSL
Sbjct: 194 VSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSL 253
Query: 70 DIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
DI + SL + L F E L LY C KC K ++TK+F I+K
Sbjct: 254 DIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQK 313
Query: 116 PPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVIH 162
P V L LKRF+ YL K+ V+ PL YL E C +L + V+H
Sbjct: 314 LPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVH 373
Query: 163 HGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 374 HGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 419
>gi|221041392|dbj|BAH12373.1| unnamed protein product [Homo sapiens]
Length = 225
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 49/140 (35%), Positives = 69/140 (49%), Gaps = 12/140 (8%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q +S+ L F E L + Y CE C K EA K+ ++K P++ L L
Sbjct: 80 LDLSVDVEQNTSITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHL 139
Query: 125 KRFNYL-----CLKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L ++ R +LV+ V+H GS GHY
Sbjct: 140 KRFKYMEQLHRYTKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYI 199
Query: 174 CIGSTSSGSYHYFGDDRVQA 193
I S G + F DD V+
Sbjct: 200 TI-VKSHGFWLLFDDDIVEV 218
>gi|397515506|ref|XP_003827991.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 3 [Pan paniscus]
Length = 501
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 118/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 203 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 262
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 263 GVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 322
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 323 LDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 382
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPLY-LEFGKFM---------HCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL L+ ++ C +L + V+
Sbjct: 383 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVV 442
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 443 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 489
>gi|395335131|gb|EJF67507.1| cysteine proteinase [Dichomitus squalens LYAD-421 SS1]
Length = 909
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 57/184 (30%), Positives = 80/184 (43%), Gaps = 21/184 (11%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
++LS+DI Q SS+ L QF A E L + N + C+ C EA K+ I+K P V L L
Sbjct: 215 IDLSIDIEQNSSVTACLRQFSASEMLCQKNKFFCDSCCDLQEAEKRMKIKKLPNVLALHL 274
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y +K++ V PL L + + L + V+H G+ GHY
Sbjct: 275 KRFKYQEDLGKYIKLAYRVAFPLELRLFNTVDDAEDPDRLYELFAIVVHIGNGPHHGHYV 334
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVT---------NAYVVIYELLPSSLHHLNSSLHSS 224
I + G + F DD V + AYV+ Y+ + L L S
Sbjct: 335 TI-IKARGVWTLFDDDSVSTVKESDIPKYFGDSNSGTAYVLYYQAVDIDLAALGLKSASP 393
Query: 225 SPGS 228
PGS
Sbjct: 394 PPGS 397
>gi|332235881|ref|XP_003267133.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Nomascus leucogenys]
Length = 520
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 117/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 222 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 281
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 282 GVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 341
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 342 LDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 401
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E C +L + V+
Sbjct: 402 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVV 461
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 462 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|47681481|gb|AAT37507.1| UBP protein [Homo sapiens]
Length = 498
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 117/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 200 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 259
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 260 GVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 319
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 320 LDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 379
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E C +L + V+
Sbjct: 380 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVV 439
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 440 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 486
>gi|90075368|dbj|BAE87364.1| unnamed protein product [Macaca fascicularis]
Length = 431
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 117/287 (40%), Gaps = 82/287 (28%)
Query: 2 RKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE-----------G 50
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++ G
Sbjct: 134 RKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNG 193
Query: 51 IHRSYL----KVISGSNN-------------------------------------LELSL 69
+ RS + +S SN L+LSL
Sbjct: 194 VSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSL 253
Query: 70 DIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
DI + SL + L F E L LY C KC K ++TK+F I+K
Sbjct: 254 DIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQK 313
Query: 116 PPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVIH 162
P V L LKRF+ YL K+ V+ PL YL E C +L + V+H
Sbjct: 314 LPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVH 373
Query: 163 HGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 374 HGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 419
>gi|357614773|gb|EHJ69266.1| hypothetical protein KGM_20368 [Danaus plexippus]
Length = 377
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 49/160 (30%), Positives = 77/160 (48%), Gaps = 12/160 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
+L +D+ Q +S+ L F E L DN ++C+ C EA K+ ++K P++ L L
Sbjct: 204 FDLQVDVDQNTSITHCLKCFSDTETLCNDNKFKCDNCSSYQEAQKRMRVKKLPLILALHL 263
Query: 125 KRFNYLC-----LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYN 173
KRF Y+ +K+S V PL L ++ R +LV+ V+H GS GHY
Sbjct: 264 KRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLVAVVVHCGSGPNRGHYI 323
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
I S G + F DD V + + + Y + ++ SS
Sbjct: 324 SI-VKSHGFWLLFDDDMVDKIDASAIEDFYGLTSDIQKSS 362
>gi|355692783|gb|EHH27386.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca mulatta]
gi|355778099|gb|EHH63135.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Macaca
fascicularis]
Length = 490
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 117/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 192 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 251
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 252 GVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 311
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 312 LDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 371
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E C +L + V+
Sbjct: 372 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVV 431
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 432 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 478
>gi|242036661|ref|XP_002465725.1| hypothetical protein SORBIDRAFT_01g044530 [Sorghum bicolor]
gi|241919579|gb|EER92723.1| hypothetical protein SORBIDRAFT_01g044530 [Sorghum bicolor]
Length = 366
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/171 (31%), Positives = 80/171 (46%), Gaps = 29/171 (16%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
+LSLDI Q SSL L F + E L ++ + C+KC EA K+ I+KPP + ++ L
Sbjct: 196 FDLSLDIEQNSSLTSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPNILVIHL 255
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L K ++ N L + V+H GS GHY
Sbjct: 256 KRFKYIEQLQRYKKLSYRVVFPLEL---KLLNTVDNSDLEYSLFAVVVHVGSGPNHGHYI 312
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQV--------------TNAYVVIYELL 210
+ S + +F D+ V+ ++ V N Y++ YE L
Sbjct: 313 SL-VKSHNHWLFFDDENVEMTDESMVQAFFGSPQEFSGNTDNGYILFYESL 362
>gi|336377045|gb|EGO05380.1| hypothetical protein SERLA73DRAFT_83040 [Serpula lacrymans var.
lacrymans S7.3]
Length = 933
Score = 65.9 bits (159), Expect = 2e-08, Method: Composition-based stats.
Identities = 63/211 (29%), Positives = 91/211 (43%), Gaps = 28/211 (13%)
Query: 43 FLLYLIEGIHRSYLKVISGSNN-------LELSLDIYQLSSLDEALGQFFAKEYLVRDNL 95
F+ + EGI S + ++ N L+LS+DI Q SS+ L QF A E L + N
Sbjct: 214 FIHKIFEGILTSETRCLTCENVSARDESFLDLSIDIEQNSSVTACLRQFSASEMLCQKNK 273
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQVPLYLEFGKFM 150
+ C+ C EA K+ I++ P V L LKRF Y +K++ V P L +
Sbjct: 274 FFCDSCCDLQEAEKRMKIKRLPNVLALHLKRFKYQEDVQKYIKLAYRVAFPFELRLFNTV 333
Query: 151 HCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVT---- 200
+N L + V+H G+ GHY I T G + F DD V +
Sbjct: 334 DDAQNPDRLYELFAIVVHIGTGPHHGHYVSIIRT-MGFWLIFDDDTVDTIKESDIPKYFG 392
Query: 201 -----NAYVVIYELLPSSLHHLNSSLHSSSP 226
+AYV+ Y+ + L L SS P
Sbjct: 393 DSNSGSAYVLYYQAVDLDLAALGLRPTSSEP 423
>gi|357489973|ref|XP_003615274.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355516609|gb|AES98232.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 1050
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 62/242 (25%), Positives = 108/242 (44%), Gaps = 54/242 (22%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P I+++L+ I R ED+HEFL +++E
Sbjct: 606 PIGILSQLQSIGSQLGNGREEDAHEFLRHVVETMQSVCLMECGVDASDALKEQTNLVGLT 665
Query: 50 --GIHRSYLKVISGSNN-------LELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQCE 99
G RS ++ + ++L+++I +++SL+EAL QF + E L +N Y C
Sbjct: 666 FGGYLRSKIQCMKCGGKSERQERMMDLTVEIEGEITSLEEALKQFTSTETLDGENKYHCG 725
Query: 100 KCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRNLV- 157
+C +A KQ ++ + P V + LKRF K++ +++ P L+ FM +L
Sbjct: 726 RCKSYEKAKKQMAVSEAPNVLTIALKRFRSGKFGKLNKSIRFPEILDLAPFMSGTSDLAI 785
Query: 158 ----SAVIHHGS--SSFSGHYNCIGSTSSGSYHYFGDD----RVQASNLQQV--TNAYVV 205
V+H + ++FSGHY +G + +F D RV L+ V AY++
Sbjct: 786 YRLYGVVVHLDTMNAAFSGHY--VGYVKNFQNSWFKVDDSVVRVTPVELETVLTKGAYML 843
Query: 206 IY 207
+Y
Sbjct: 844 LY 845
>gi|345316872|ref|XP_003429803.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Ornithorhynchus
anatinus]
Length = 494
Score = 65.9 bits (159), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/287 (28%), Positives = 117/287 (40%), Gaps = 82/287 (28%)
Query: 2 RKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE-----------G 50
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++ G
Sbjct: 197 RKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNG 256
Query: 51 IHRSYL----KVISGSNN-------------------------------------LELSL 69
+ RS + +S SN L+LSL
Sbjct: 257 VSRSVILQENSGLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSL 316
Query: 70 DIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
DI + SL + L F E L LY C KC K ++TK+F I+K
Sbjct: 317 DIPSQFRNKRSKNQENGPMCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQK 376
Query: 116 PPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVIH 162
P V L LKRF+ YL K+ V+ PL YL E C +L + V+H
Sbjct: 377 LPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVH 436
Query: 163 HGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 437 HGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 482
>gi|426233170|ref|XP_004010590.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Ovis
aries]
Length = 520
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 116/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 222 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 281
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
GI RS + +S SN L+LS
Sbjct: 282 GISRSSILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 341
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI SL + L F E L LY C KC K ++TK+F I+
Sbjct: 342 LDIPSQFRNKRSKNQENGPTCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 401
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E +C +L + V+
Sbjct: 402 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVV 461
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ V AY++ Y
Sbjct: 462 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEDTVVKAKAYILFY 508
>gi|432117381|gb|ELK37725.1| Ubiquitin carboxyl-terminal hydrolase 46, partial [Myotis davidii]
Length = 422
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 78/160 (48%), Gaps = 12/160 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q +S+ L F E L + Y CE+C K EA K+ ++K P++ L L
Sbjct: 252 LDLSVDVEQNTSITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHL 311
Query: 125 KRFNYLC-----LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L G + R +LV+ V+H GS GHY
Sbjct: 312 KRFKYMDQLHRYTKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYI 371
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
I S + F DD V+ + Q + Y + ++ +S
Sbjct: 372 AI-VKSHDFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNS 410
>gi|297696819|ref|XP_002825577.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Pongo
abelii]
gi|332235885|ref|XP_003267135.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 3
[Nomascus leucogenys]
Length = 476
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 117/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 178 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 237
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 238 GVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 297
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 298 LDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 357
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E C +L + V+
Sbjct: 358 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVV 417
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 418 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 464
>gi|55770886|ref|NP_006528.2| ubiquitin carboxyl-terminal hydrolase 3 isoform 1 [Homo sapiens]
gi|205371844|sp|Q9Y6I4.2|UBP3_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|17390251|gb|AAH18113.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|30583377|gb|AAP35933.1| ubiquitin specific protease 3 [Homo sapiens]
gi|61359968|gb|AAX41792.1| ubiquitin specific protease 3 [synthetic construct]
gi|61359975|gb|AAX41793.1| ubiquitin specific protease 3 [synthetic construct]
gi|76828049|gb|AAI07138.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|76828053|gb|AAI07139.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|112180754|gb|AAH65300.1| Ubiquitin specific peptidase 3 [Homo sapiens]
gi|119598057|gb|EAW77651.1| ubiquitin specific peptidase 3 [Homo sapiens]
gi|123980244|gb|ABM81951.1| ubiquitin specific peptidase 3 [synthetic construct]
gi|123995059|gb|ABM85131.1| ubiquitin specific peptidase 3 [synthetic construct]
gi|168277636|dbj|BAG10796.1| ubiquitin carboxyl-terminal hydrolase 3 [synthetic construct]
Length = 520
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 117/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 222 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 281
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 282 GVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 341
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 342 LDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 401
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E C +L + V+
Sbjct: 402 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVV 461
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 462 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|403298210|ref|XP_003939924.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Saimiri
boliviensis boliviensis]
Length = 498
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 118/287 (41%), Gaps = 82/287 (28%)
Query: 2 RKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE-----------G 50
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++ G
Sbjct: 201 RKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNG 260
Query: 51 IHRSYL----KVISGSNN-------------------------------------LELSL 69
+ RS + +S SN L+LSL
Sbjct: 261 VSRSTILQENSALSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSL 320
Query: 70 DIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
DI + SL + L F E L LY C KC K ++TK+F I+K
Sbjct: 321 DIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQK 380
Query: 116 PPIVFILLLKRFN---YLCLKISCAVQVPLY-LEFGKFM---------HCRRNLVSAVIH 162
P V L LKRF+ YL K+ V+ PL L+ ++ C +L + V+H
Sbjct: 381 LPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPDSCLYDLAAVVVH 440
Query: 163 HGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 441 HGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 486
>gi|393246859|gb|EJD54367.1| cysteine proteinase, partial [Auricularia delicata TFB-10046 SS5]
Length = 263
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 60/222 (27%), Positives = 95/222 (42%), Gaps = 39/222 (17%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLI--------------------E 49
A+ + P +NK++ + F +D+HEF+ YL+ E
Sbjct: 17 ADDKGTVSPLAFVNKVRQLHEPFRSPAHQDAHEFMNYLLNKIVEDIDSDAHITFVHALFE 76
Query: 50 GIHRSYLKVISGSNN-------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G+ S + ++ N L+LS+DI Q SS+ L F A E L + N + C+ C
Sbjct: 77 GVLTSETRCLTCENVSSRDESFLDLSIDIEQNSSVTACLRSFSASEMLCQRNKFFCDACC 136
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNY---------LCLKISCAVQVPLYLEFGKFMHCR 153
EA K+ I+K P V L LKRF Y L +++ ++ L+
Sbjct: 137 GLQEAEKRMKIKKLPNVLALHLKRFKYQEDTQKYVKLAYRVAFPHELRLFDTVDDAEDPD 196
Query: 154 R--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
R L + V+H G+ GHY I S G++ F D+ V+
Sbjct: 197 RLYELFAIVVHIGTGPHHGHYIAI-IKSRGTWLVFDDNSVET 237
>gi|224088268|ref|XP_002308398.1| predicted protein [Populus trichocarpa]
gi|222854374|gb|EEE91921.1| predicted protein [Populus trichocarpa]
Length = 751
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/154 (30%), Positives = 77/154 (50%), Gaps = 11/154 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVR-DNLYQCEKCGYKTEATKQFSIEKPPIVFILL 123
L+LSL+I + +L L F A + L + YQC++C K A K ++ K P V +
Sbjct: 58 LDLSLEIAKADTLPALLRNFTAADMLDGGEKHYQCQRCKQKVRAKKWLTVHKAPHVLTIH 117
Query: 124 LKRFNYL--CLKISCAVQVPLYLEFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCI 175
LKRF+ K+ V L+ F+ + +L ++H+G ++ SGHY C
Sbjct: 118 LKRFHAHDPGRKVDRKVIFDRSLDMKPFVSGSYEGDLKYSLYGVLVHYGHNTHSGHYVCF 177
Query: 176 GSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
TSSG +H D++V+ + + V AY++ Y
Sbjct: 178 VRTSSGIWHLLNDNQVRQVSEKAVLEQKAYMLFY 211
>gi|375493565|ref|NP_001243631.1| ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Homo sapiens]
Length = 476
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 117/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 178 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 237
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 238 GVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 297
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 298 LDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 357
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E C +L + V+
Sbjct: 358 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVV 417
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 418 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 464
>gi|357114488|ref|XP_003559032.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 26-like
[Brachypodium distachyon]
Length = 1074
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 69/137 (50%), Gaps = 11/137 (8%)
Query: 66 ELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLK 125
EL L+I L++L+E+L + + E L +N Y CE C + +AT+ + P V LK
Sbjct: 245 ELELNIKGLNNLEESLDDYLSVEALNGENQYSCESCQKRVDATRCIKLRSLPPVVNFQLK 304
Query: 126 RFNYLC-----LKISCAVQVPLYLEFGKFMHCRR-----NLVSAVIHHGSSSFSGHYNC- 174
R+ +L KIS A P L+ GK + +L + +IH GS++ SGHY
Sbjct: 305 RYVFLPKTTTKKKISSAFSFPAQLDMGKRLSNPSSSYTYDLAAILIHKGSAANSGHYVAH 364
Query: 175 IGSTSSGSYHYFGDDRV 191
I SS + F D+ V
Sbjct: 365 IKDESSCQWWEFDDECV 381
>gi|221485180|gb|EEE23470.1| hypothetical protein TGGT1_104760 [Toxoplasma gondii GT1]
Length = 2513
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 43/126 (34%), Positives = 61/126 (48%), Gaps = 8/126 (6%)
Query: 70 DIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY 129
D+++ SL E KE L +N Y CE C K +A K I PP I++L R+++
Sbjct: 2320 DVWEGPSLQEFFDALVKKERLSGENAYACEVCKTKRDAVKWQEIVSPPAHLIVVLNRYSW 2379
Query: 130 LCL-----KISCAVQVPLYLEFGKFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
K V V L G F + L +AVIH G+S+ SGHY C+G S +
Sbjct: 2380 SVFSNEKKKNVTHVHVDGTLTIGVFTY---ELYAAVIHAGASANSGHYYCLGRRSEFPRN 2436
Query: 185 YFGDDR 190
GD++
Sbjct: 2437 GAGDNK 2442
>gi|5734755|gb|AAD50020.1|AC007651_15 Unknown protein [Arabidopsis thaliana]
Length = 891
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/292 (23%), Positives = 114/292 (39%), Gaps = 65/292 (22%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS-------- 62
ESG + I++ ++ I ED+HEFL L+ + L+ + G
Sbjct: 462 ESGGPLSASRILSHMRSINCQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQ 521
Query: 63 ------------------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLV 91
N ++L+L+IY + SL +AL QF E L
Sbjct: 522 ETTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDLD 581
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFM 150
+N+Y+C +C A K+ SI + P + ++LKRF KI+ + P L+ FM
Sbjct: 582 GENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQEGRYGKINKCISFPEMLDMIPFM 641
Query: 151 HCRRN------LVSAVIHHGS--SSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTNA 202
+ L + ++H + +SFSGHY G+++ D + + QV +
Sbjct: 642 TRTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMSE 701
Query: 203 ------YVVIYELLPSSLHHLNSSLHSSSP-----------GSVEPRTHHRN 237
Y+ Y H+ + +H S P +PR H+N
Sbjct: 702 GAYMLFYMRSYPRPQRGEHNGKAPVHHSQPRNEMKEQRKPVNRFKPRADHKN 753
>gi|403356401|gb|EJY77794.1| Ubiquitin carboxyl-terminal hydrolase family protein [Oxytricha
trifallax]
Length = 1107
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 78/172 (45%), Gaps = 29/172 (16%)
Query: 66 ELSLDIYQLSSLDEALGQFFAKEYL--VRDNLYQCEKCGYKTEATKQFSIEKPPIVFILL 123
++SL I Q +L ++L F A E L D +Y C +C KT A + P I+
Sbjct: 941 DISLSITQ--NLKQSLQHFLATEKLEGTPDEMYSCIRCQTKTNAKIKKRFLNLPKYLIIN 998
Query: 124 LKRF----NYLCLKISCAVQVPLYLEF-----------GKFMHCRRNLVSAVIHHGSSSF 168
LKRF N+ +K ++ PL ++ GKFM L S V+H G +
Sbjct: 999 LKRFQEVQNHQFIKNKKPIEYPLSMDMDDYCNQPWDKLGKFM-----LQSVVLHKGQTIE 1053
Query: 169 SGHYNCIGSTSSGSYHYFGDDRVQASN-----LQQVTNAYVVIYELLPSSLH 215
SGHYNCI G + + D +Q LQ +A ++IYE + + +
Sbjct: 1054 SGHYNCITRRLDGQWWFCNDSEIQRVTKVEHVLQSKKSASILIYEKIDADIQ 1105
>gi|219126258|ref|XP_002183378.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217405134|gb|EEC45078.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 190
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 57/191 (29%), Positives = 82/191 (42%), Gaps = 39/191 (20%)
Query: 38 EDSHEFLLYLI-----EGIHRSYLKVISG------------------SNNLELSLDIY-- 72
ED+HEFL L+ G ++S + G ++LSLDI
Sbjct: 1 EDAHEFLRALLGTLTMSGQNKSLSSLFDGLLESAVTCQTCRRPSLTRDRYMDLSLDIQAE 60
Query: 73 QLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-- 130
Q+ +L +AL +F E L +N C +CG K ATK + P + + KRF +
Sbjct: 61 QIETLTDALHEFTKTELLNGENKVNCGRCGTKRIATKGLRLATAPSILVCHFKRFAFDRF 120
Query: 131 --CLKISCAVQVPLYLEFGKFMHCRRN--------LVSAVIHHGSSSFSGHYNCIGSTSS 180
++S VQ PL LE G +M R N LV+ ++H G S GHY
Sbjct: 121 GNVARLSRKVQFPLRLEIGAYMS-RVNKARPPPYDLVAVLVHQGQSCERGHYVAF-VKKH 178
Query: 181 GSYHYFGDDRV 191
G + D+RV
Sbjct: 179 GEWFECNDERV 189
>gi|401841065|gb|EJT43615.1| UBP8-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 473
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 64/239 (26%), Positives = 94/239 (39%), Gaps = 66/239 (27%)
Query: 35 YRPEDSHEFLLYLIEGIHRSYL------KVISGSNN------------------------ 64
Y +D+HEF +LI IH+SY+ K + +NN
Sbjct: 233 YSQQDAHEFWQFLINEIHQSYVLSLPNPKEVDRANNKRCDCIVHTVFEGSLESSIVCPGC 292
Query: 65 -----------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSI 113
++LSLDI L E L F KE L++D Y C +C +A KQ I
Sbjct: 293 QNNSKTTIDPFMDLSLDIKDKQKLYECLDSFHKKE-LLKDFNYHCGECNSTQDAIKQLGI 351
Query: 114 EKPPIVFILLLKRFNYLC----LKISCAVQVPLYLEF-----------------GKFMHC 152
+ P V +L LKRF +L K+ ++ P YL GK
Sbjct: 352 HRLPSVLVLQLKRFEHLLNGTNRKLDDFIEFPTYLNMKSYCSTAESESENHIGNGKVPDI 411
Query: 153 RRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIYEL 209
L+ V H G+ + GHY S G + F D V + + ++V AY++ Y +
Sbjct: 412 IYELIGIVSHKGTVN-EGHYIAFCKISGGQWFKFNDSMVSSISQEEVLKEQAYLLFYTI 469
>gi|401626223|gb|EJS44179.1| ubp8p [Saccharomyces arboricola H-6]
Length = 473
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 68/246 (27%), Positives = 95/246 (38%), Gaps = 66/246 (26%)
Query: 28 IAHHFEYYRPEDSHEFLLYLIEGIHRSYL----------------------KVISGS--- 62
I + Y +D+HEF ++I IH+SY+ V GS
Sbjct: 226 INQNLAGYSQQDAHEFWQFIINQIHQSYVLSLENPKEAESANDKHCDCIVHTVFEGSLES 285
Query: 63 --------NN--------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTE 106
NN ++LSLDI L E L F KE L++D Y C KC +
Sbjct: 286 SIVCPGCQNNSKTTIDPFMDLSLDIKDKKKLYECLDSFHKKE-LLKDFNYHCGKCNSTQD 344
Query: 107 ATKQFSIEKPPIVFILLLKRFNYLC----LKISCAVQVPLYLEF---------------- 146
A KQ I K P V +L LKRF +L K+ ++ P YL
Sbjct: 345 AIKQLGIHKLPSVLVLQLKRFEHLLNGTNRKLDDFIEFPTYLNMKSYCSKGESESEKHIG 404
Query: 147 -GKFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAY 203
GK L+ V H G+ + GHY S G + F D V + + + V AY
Sbjct: 405 NGKVPDIIYELIGIVSHRGTVN-EGHYIAFCKISGGQWFKFNDSMVSSISQEGVLKEQAY 463
Query: 204 VVIYEL 209
++ Y +
Sbjct: 464 LLFYTV 469
>gi|440907019|gb|ELR57212.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Bos grunniens
mutus]
Length = 492
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 116/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 194 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 253
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
GI RS + +S SN L+LS
Sbjct: 254 GISRSSILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 313
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI SL + L F E L LY C KC K ++TK+F I+
Sbjct: 314 LDIPSQFRNKRSKNQENGPTCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 373
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E +C +L + V+
Sbjct: 374 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVV 433
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ V AY++ Y
Sbjct: 434 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEDTVLKAKAYILFY 480
>gi|426233172|ref|XP_004010591.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2 [Ovis
aries]
Length = 476
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 84/288 (29%), Positives = 116/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 178 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 237
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
GI RS + +S SN L+LS
Sbjct: 238 GISRSSILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 297
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI SL + L F E L LY C KC K ++TK+F I+
Sbjct: 298 LDIPSQFRNKRSKNQENGPTCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 357
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E +C +L + V+
Sbjct: 358 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVV 417
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ V AY++ Y
Sbjct: 418 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEDTVVKAKAYILFY 464
>gi|356563968|ref|XP_003550229.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 19-like [Glycine
max]
Length = 735
Score = 65.5 bits (158), Expect = 2e-08, Method: Composition-based stats.
Identities = 60/246 (24%), Positives = 106/246 (43%), Gaps = 50/246 (20%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--------- 62
S A P I+++L I Y + ED+HEF+ + I+ + L G
Sbjct: 242 SSQAFSPMNILSRLPNIGGTLGYGKQEDAHEFMRFSIDTMQSVCLDEFGGEKAVPPNLQE 301
Query: 63 -----------------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLVR 92
N ++L+++I+ +SL+E L QF AKE L
Sbjct: 302 TTLIQHIFGGRLQSEVICTKCDKISNQYENMMDLTVEIHGDAASLEECLDQFTAKERLDG 361
Query: 93 DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMH 151
+N+Y+CE C +A K+ +++ P + + LKRF K++ + P L +M
Sbjct: 362 ENMYKCEGCKDYVKAWKRLTVKCAPNILTIALKRFQSGRFGKLNKRIAFPETLNLSPYMS 421
Query: 152 CRRN------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN-- 201
+ L V+H ++SF GHY C G+++ D +V +++V +
Sbjct: 422 EAGDGSDIYKLYGVVVHIDMLNASFFGHYICYIKDFQGNWYRIDDWKVMTVEVEEVLSQG 481
Query: 202 AYVVIY 207
AY+++Y
Sbjct: 482 AYMLLY 487
>gi|407039044|gb|EKE39435.1| ubiquitin carboxyl-terminal hydrolase domain containing protein
[Entamoeba nuttalli P19]
Length = 638
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 69/139 (49%), Gaps = 7/139 (5%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL----C 131
SL+ L FF + L + N ++C +CG K A ++ IE PP V ++ LKRF Y
Sbjct: 498 SLEWCLNDFFKENILGKGNEWKCSQCGKKVNARQKCIIEYPPNVLVIQLKRFRYTEHLSV 557
Query: 132 LKISCAVQVPLYLEFGKFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV 191
+K + V P+ ++ +F + +++V++H + GHY S + F DD V
Sbjct: 558 VKDNSLVYFPIEIDLHQFGMVGKYRLNSVVNHRGTLNGGHYYSYCRCGS-DWFVFNDDTV 616
Query: 192 QASNLQQVT--NAYVVIYE 208
N + NA+++ YE
Sbjct: 617 TRLNTNHIVTNNAFMLFYE 635
>gi|396472217|ref|XP_003839053.1| hypothetical protein LEMA_P027260.1 [Leptosphaeria maculans JN3]
gi|312215622|emb|CBX95574.1| hypothetical protein LEMA_P027260.1 [Leptosphaeria maculans JN3]
Length = 758
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 47 LIEGIHRSYLKVISGSNN-------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCE 99
L EG S + ++ N L+LS+D+ Q SS+ L +F +E L N + C+
Sbjct: 294 LFEGTLTSETRCLTCENTSQRDEIFLDLSVDLEQHSSVTSCLRKFSEEEMLCERNKFHCD 353
Query: 100 KCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQVPLYLEFGKFMHCRR 154
CG EA K+ I++ P + L LKRF Y K+ V P YL
Sbjct: 354 NCGGLQEAEKRMKIKRLPKILALHLKRFKYTEDLQRLQKLFHRVVYPFYLRLFNTTDDAE 413
Query: 155 N------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN------- 201
+ L + V+H G + GHY I T + F D+ V+ + V N
Sbjct: 414 DPDRLYELYAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDEMVEPVDKAYVRNFFGGENV 473
Query: 202 ---AYVVIYE 208
AYV+ Y+
Sbjct: 474 LACAYVLFYQ 483
>gi|440295045|gb|ELP87974.1| hypothetical protein EIN_418530 [Entamoeba invadens IP1]
Length = 600
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/216 (23%), Positives = 101/216 (46%), Gaps = 35/216 (16%)
Query: 25 LKLIAHHFEYYRPEDSHEFLLYLIEGIH-------RSYLKVISG---------------- 61
LK+++ E Y ED+ EF + L++ +H ++ + +IS
Sbjct: 140 LKILSKSLERYEQEDATEFYVLLLDHLHEAAIGKGKNKISIISSIFHTTLTSRITCYNCL 199
Query: 62 --SNNLE----LSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
S++ E L +++ + +L+ L FF K+ L + Y C+KC ++A+K++ +++
Sbjct: 200 GISDSNEQFSFLPVEVTKDKTLESGLDVFFKKDVL---DGYTCDKCKTSSKASKRYFVKE 256
Query: 116 PPIVFILLLKRFNYLCLKISCAVQVPLYLEFGKF-MHCRRNLVSAVIHHGSSSFSGHYNC 174
P V + +KRF + KI+ V+ P L K+ +L ++H G + GHY C
Sbjct: 257 LPWVLAIQIKRFGWDERKINGFVKFPSELNMSKYGKDGLFDLYGVIVHLGRTKHGGHYIC 316
Query: 175 IGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIYE 208
+ + DD V + ++ V + Y++ Y+
Sbjct: 317 YIKGPNSGWFQCDDDTVTSVPIKTVLKSEGYMLFYK 352
>gi|18420557|ref|NP_568074.1| ubiquitin carboxyl-terminal hydrolase 3 [Arabidopsis thaliana]
gi|62901126|sp|O24454.1|UBP3_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; Short=AtUBP3; AltName:
Full=Ubiquitin thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|2347098|gb|AAB67966.1| ubiquitin-specific protease [Arabidopsis thaliana]
gi|4490742|emb|CAB38904.1| ubiquitin-specific protease (AtUBP3) [Arabidopsis thaliana]
gi|7271046|emb|CAB80654.1| ubiquitin-specific protease (AtUBP3) [Arabidopsis thaliana]
gi|16604539|gb|AAL24275.1| AT4g39910/T5J17_80 [Arabidopsis thaliana]
gi|18958042|gb|AAL79594.1| AT4g39910/T5J17_80 [Arabidopsis thaliana]
gi|332661736|gb|AEE87136.1| ubiquitin carboxyl-terminal hydrolase 3 [Arabidopsis thaliana]
Length = 371
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LSLDI Q SS+ L F + E L ++ + C+KC EA K+ I+KPP + ++ L
Sbjct: 200 LDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHL 259
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGK----FMHCRRNLVSAVIHHGSSSFSGHYNCI 175
KRF Y+ K+S V PL L+ + +L + V+H GS GHY +
Sbjct: 260 KRFKYIEQLGRYKKLSYRVVFPLELKLSNTVEPYADVEYSLFAVVVHVGSGPNHGHYVSL 319
Query: 176 GSTSSGSYHYFGDDRVQ 192
S + +F D+ V+
Sbjct: 320 -VKSHNHWLFFDDENVE 335
>gi|297802104|ref|XP_002868936.1| ubiquitin-specific protease 3 [Arabidopsis lyrata subsp. lyrata]
gi|297314772|gb|EFH45195.1| ubiquitin-specific protease 3 [Arabidopsis lyrata subsp. lyrata]
Length = 371
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/137 (33%), Positives = 70/137 (51%), Gaps = 10/137 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LSLDI Q SS+ L F + E L ++ + C+KC EA K+ I+KPP + ++ L
Sbjct: 200 LDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHL 259
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGK----FMHCRRNLVSAVIHHGSSSFSGHYNCI 175
KRF Y+ K+S V PL L+ + +L + V+H GS GHY +
Sbjct: 260 KRFKYIEQLGRYKKLSYRVVFPLELKLSNTVEPYADVEYSLFAVVVHVGSGPNHGHYVSL 319
Query: 176 GSTSSGSYHYFGDDRVQ 192
S + +F D+ V+
Sbjct: 320 -VKSHNHWLFFDDENVE 335
>gi|430812209|emb|CCJ30362.1| unnamed protein product [Pneumocystis jirovecii]
Length = 471
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 68/144 (47%), Gaps = 14/144 (9%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + +S+ L FFA E L N + C+ CG EA K I++ P + L L
Sbjct: 167 LDLSIDVSKNTSVTSCLNAFFAPEMLCEKNKFHCDFCGNLQEAEKCVKIKRLPEILTLHL 226
Query: 125 KRF-------NYLCLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGH 171
KRF +Y K+ V P +L + + L + V+H GS GH
Sbjct: 227 KRFKCAEENGDYKFFKLFHTVVYPYHLRLSNIANDVNDSDRLYELYAVVVHLGSGPCHGH 286
Query: 172 YNCIGSTSSGSYHYFGDDRVQASN 195
Y + T SG + F D+RV+ N
Sbjct: 287 YVSVIKTESG-WTLFDDERVEPVN 309
>gi|356498842|ref|XP_003518257.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
max]
Length = 1036
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 61/246 (24%), Positives = 107/246 (43%), Gaps = 50/246 (20%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN------ 64
++ S + P I+++L+ I R ED+HEFL ++E + L + SG N
Sbjct: 563 DTNSPMSPLGILSQLQNIGSQLGNGREEDAHEFLRLVVETMQSVCL-MESGDNMSDSLKE 621
Query: 65 --------------------------------LELSLDIY-QLSSLDEALGQFFAKEYLV 91
++L+++I ++++L+EAL QF + E L
Sbjct: 622 ETNLMGLTFGGYLQSKIKCMKCGGKSERQERMMDLTVEIEGEIATLEEALRQFTSAETLD 681
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFM 150
+N Y+C +C +A K+ ++ + P V + LKRF K++ ++ P L+ FM
Sbjct: 682 GENKYRCVRCKSYEKAKKKMTVLEAPNVLTIALKRFQSGKFGKLNKPIRFPEILDLAPFM 741
Query: 151 HCRRNLV-----SAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TN 201
+L V+H +++FSGHY C + D V A L+ V
Sbjct: 742 SGTSDLPIYRLYGVVVHLDIMNAAFSGHYVCYVKNFQSRWFKVDDSVVTAVELESVLAKG 801
Query: 202 AYVVIY 207
AY++ Y
Sbjct: 802 AYMLFY 807
>gi|171695326|ref|XP_001912587.1| hypothetical protein [Podospora anserina S mat+]
gi|170947905|emb|CAP60069.1| unnamed protein product [Podospora anserina S mat+]
Length = 840
Score = 65.1 bits (157), Expect = 2e-08, Method: Composition-based stats.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + SS+ L +F A+E L N + C+ CG EA K+ ++K P V L L
Sbjct: 319 LDLSIDLEEHSSVTSCLQKFSAEEMLCERNKFHCDHCGGLQEAEKRMKVKKLPKVLALHL 378
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ + P ++ + L + VIH G +++ GHY
Sbjct: 379 KRFKYTEDYSRLQKLFHRIVYPYHIRMFNTTDDAEDQDRLYELYAVVIHIGGNAYHGHYV 438
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
+ T + F D+ V+ + V N AYV+ Y+
Sbjct: 439 SVIKTKDRGWLLFDDEMVEPVDKHFVKNFFGDKPGMACAYVLFYQ 483
>gi|357465295|ref|XP_003602929.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355491977|gb|AES73180.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 1116
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 62/246 (25%), Positives = 108/246 (43%), Gaps = 49/246 (19%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------GIH-------- 52
++ S + P I+++L+ I + ED+HEFL + I+ GI+
Sbjct: 641 DTKSPLSPTGILSQLQSIGSQLGNGKEEDAHEFLRHAIDTMQSVCLMEAGINASGSSEED 700
Query: 53 ------------RSYLKVISGSNN-------LELSLDIY-QLSSLDEALGQFFAKEYLVR 92
RS +K + ++L+++I ++S+L EAL +F + E L
Sbjct: 701 TTLMGQTFGGYLRSKIKCMKCGGKSERQERMMDLTVEIEGEISTLAEALRRFTSTETLDG 760
Query: 93 DNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMH 151
+N Y C +C +A K+ ++ + P + + LKRF K++ VQ P L+ F+
Sbjct: 761 ENKYHCVRCKSYQKAKKKLTVSEAPNILTVALKRFQSGKFGKLNKPVQFPEILDLAPFVS 820
Query: 152 CRRN------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TN 201
+ L V+H ++SFSGHY C + D V A L++V
Sbjct: 821 GTSDKTPIYRLYGVVVHLDVMNASFSGHYVCYLKNIQNKWFKVDDSVVTAVELERVLTKG 880
Query: 202 AYVVIY 207
AY++ Y
Sbjct: 881 AYMLFY 886
>gi|343172716|gb|AEL99061.1| ubiquitin carboxyl-terminal hydrolase, partial [Silene latifolia]
Length = 227
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
+LSLDI Q SS+ L F + E L ++ + C+KC EA K+ I+KPP + ++ L
Sbjct: 61 FDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCSSLQEAQKRMKIKKPPHILVIHL 120
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRR---NLVSAVIHHGSSSFSGHYNCIG 176
KRF Y+ K+S V PL L+ + + +L + V+H GS GHY +
Sbjct: 121 KRFKYIEQLGRYKKLSYRVVFPLELKLSETVEDTDREYSLFAVVVHVGSGPNHGHYVSL- 179
Query: 177 STSSGSYHYFGDDRVQ 192
S + +F D+ V+
Sbjct: 180 VKSHNHWLFFDDENVE 195
>gi|303282773|ref|XP_003060678.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226458149|gb|EEH55447.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 376
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 65/263 (24%), Positives = 102/263 (38%), Gaps = 54/263 (20%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLY-------LIEGIHRSYLKVI 59
A Q + P+ I +LK F + +D+HEFL Y ++E HR+
Sbjct: 78 AGQKKRTGVFAPKKFIARLKKDNELFRSFMHQDAHEFLNYVLNECVEILEKEHRAAHPTP 137
Query: 60 SGSNN----------------------------------LELSLDIYQLSSLDEALGQFF 85
+G++ L+LSLD+ Q +S+ L F
Sbjct: 138 AGASAPPITTWIHDIFQGQLTNQTRCLWCENVTSRKEAFLDLSLDVEQNASVTSCLRTFS 197
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----LKISCAVQV 140
+ E L + +QC+ CG EA K+ ++ P V + LKRF Y+ K+ V
Sbjct: 198 SNETLDSADKFQCDACGGLQEAHKRMLVKTAPPVLAMHLKRFKYIESLGRHKKLMHRVVF 257
Query: 141 PLYLEFGKFM-------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
P L+ L + V+H GS GHY C+ S G + + DD VQ
Sbjct: 258 PDELKLNNMEDDLPGTPDAAYGLFAVVVHVGSGPNHGHYVCL-VKSHGQWLTYDDDDVQL 316
Query: 194 SNLQQVTNAYVVIYELLPSSLHH 216
++ + N + E S+ H
Sbjct: 317 ADASALQNVFGSTREHGGSNTEH 339
>gi|402912520|ref|XP_003918809.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 332
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 57/224 (25%), Positives = 96/224 (42%), Gaps = 44/224 (19%)
Query: 28 IAHHFEYYRPEDSHEFLLYLIE----------------------------GIHRSYLKVI 59
+A F + D+HEFL+++++ G RS +K +
Sbjct: 1 MAAGFHRGKQADAHEFLMFIVDAMKKACLPGHKQVDHDSEDTTLIHQIFGGCWRSQIKCL 60
Query: 60 --SGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFS 112
G ++ L+++LDI S+ +AL Q E L +N Y C C K A+K F+
Sbjct: 61 HCQGVSDTFDPYLDIALDIQAAQSVKQALEQVVKPEELNGENAYHCGLCLQKAPASKTFT 120
Query: 113 IEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGS 165
+ V IL+LKRF+ + K++ VQ P L+ +M + L + ++H G
Sbjct: 121 LHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLVYVLYAVLVHAGW 180
Query: 166 SSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+GHY G ++ D + A ++ V AYV+ Y
Sbjct: 181 CCHNGHYLSYVKAPGGQWYKMDDAEITACSIASVLSQQAYVLFY 224
>gi|343172718|gb|AEL99062.1| ubiquitin carboxyl-terminal hydrolase, partial [Silene latifolia]
Length = 227
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
+LSLDI Q SS+ L F + E L ++ + C+KC EA K+ I+KPP + ++ L
Sbjct: 61 FDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCSSLQEAQKRMKIKKPPHILVIHL 120
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRR---NLVSAVIHHGSSSFSGHYNCIG 176
KRF Y+ K+S V PL L+ + + +L + V+H GS GHY +
Sbjct: 121 KRFKYIEQLGRYKKLSYRVVFPLELKLSETVEDTDREYSLFAVVVHVGSGPNHGHYVSL- 179
Query: 177 STSSGSYHYFGDDRVQ 192
S + +F D+ V+
Sbjct: 180 VKSHNHWLFFDDENVE 195
>gi|347838295|emb|CCD52867.1| similar to U1biquitin-specific peptidase [Botryotinia fuckeliana]
Length = 774
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + SS+ L +F A+E L N + C+ CG EA K+ I+ P V +L L
Sbjct: 321 LDLSIDLEKNSSVTSCLQKFSAEEMLCEKNKFHCDTCGGLQEAEKRMKIKTLPKVLVLHL 380
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF + K+ V P +L + L + V+H G+++F GHY
Sbjct: 381 KRFKWTDDLTRLQKLFYTVNYPYHLRMFNTTDDAEDPDRLYELYAVVVHIGTNAFHGHYV 440
Query: 174 CIGSTSSGSYHYFGDDRVQ 192
+ T + F D+ V+
Sbjct: 441 AVIKTEDRGWLLFDDEMVE 459
>gi|302503460|ref|XP_003013690.1| ubiquitin C-terminal hydrolase CreB [Arthroderma benhamiae CBS
112371]
gi|291177255|gb|EFE33050.1| ubiquitin C-terminal hydrolase CreB [Arthroderma benhamiae CBS
112371]
Length = 1147
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F +E L N + C+ CG EA K+ I++ P + L L
Sbjct: 579 LDLSVDLEQHSSVTSCLRKFSQEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 638
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P YL + L + V+H G + GHY
Sbjct: 639 KRFKYTEDQQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 698
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 699 AIIKTEDRGWLLFDDEMVEPVDKSYVRNFFGDKPGQACAYVLFYQ 743
>gi|326476285|gb|EGE00295.1| ubiquitin C-terminal hydrolase CreB [Trichophyton tonsurans CBS
112818]
Length = 881
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F +E L N + C+ CG EA K+ I++ P + L L
Sbjct: 319 LDLSVDLEQHSSVTSCLRKFSQEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 378
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P YL + L + V+H G + GHY
Sbjct: 379 KRFKYTEDQQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 438
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 439 AIIKTEDRGWLLFDDEMVEPVDKSYVRNFFGDKPGQACAYVLFYQ 483
>gi|327294411|ref|XP_003231901.1| ubiquitin C-terminal hydrolase CreB [Trichophyton rubrum CBS
118892]
gi|326465846|gb|EGD91299.1| ubiquitin C-terminal hydrolase CreB [Trichophyton rubrum CBS
118892]
Length = 878
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F +E L N + C+ CG EA K+ I++ P + L L
Sbjct: 318 LDLSVDLEQHSSVTSCLRKFSQEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 377
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P YL + L + V+H G + GHY
Sbjct: 378 KRFKYTEDQQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 437
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 438 AIIKTEDRGWLLFDDEMVEPVDKSYVRNFFGDKPGQACAYVLFYQ 482
>gi|340517400|gb|EGR47644.1| deubiquinating enzyme [Trichoderma reesei QM6a]
Length = 729
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + SS+ L +F A+E L N + C+ CG EA K+ +++ P V L L
Sbjct: 311 LDLSIDLEEHSSVTSCLRKFSAEEMLCERNKFHCDHCGGLQEAEKRMKVKRLPKVLTLHL 370
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G +++ GHY
Sbjct: 371 KRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTEDAEDPDRMYELYAVVVHIGGNAYHGHYV 430
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 431 SIIKTPDRGWVLFDDEMVEPVDKHFVRNFFGDKPGMATAYVLFYQ 475
>gi|326478997|gb|EGE03007.1| ubiquitin carboxyl-terminal hydrolase [Trichophyton equinum CBS
127.97]
Length = 881
Score = 65.1 bits (157), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F +E L N + C+ CG EA K+ I++ P + L L
Sbjct: 319 LDLSVDLEQHSSVTSCLRKFSQEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 378
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P YL + L + V+H G + GHY
Sbjct: 379 KRFKYTEDQQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 438
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 439 AIIKTEDRGWLLFDDEMVEPVDKSYVRNFFGDKPGQACAYVLFYQ 483
>gi|119924425|ref|XP_001250435.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Bos taurus]
Length = 533
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 58/233 (24%), Positives = 97/233 (41%), Gaps = 45/233 (19%)
Query: 19 ELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN-------------- 64
E+I + L+A F ++ ED+HEFL++ + + + L S +
Sbjct: 153 EVIRPRKDLLAG-FHRHQQEDAHEFLMFTLNAMQQGCLSASQPSGHASEDTTVIRQIFGG 211
Query: 65 ---------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGY 103
L++SLDI S+++AL + E L DN Y C C
Sbjct: 212 TWRSQIQCLRCLGVSDTFDPYLDISLDITAAQSVEQALRELVKPEKLDADNAYDCGVCLR 271
Query: 104 KTEATKQFSIEKPPIVFILLLKRFNYLC-LKISCAVQVPLYLEFGKFMHCRRN------L 156
K ATK+ ++ V +L+LKRF + K + V+ P L+ + R+ L
Sbjct: 272 KVPATKRLTLHSTSQVLVLVLKRFTPVSGAKRAQEVRYPQCLDLQPYTSERKAGPLGYVL 331
Query: 157 VSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
+ ++H G S GHY +G ++ D +V A + +AYV+ Y
Sbjct: 332 YAVLVHSGWSCERGHYFYYVRAGNGQWYKMDDAKVTACDETAALSQSAYVLFY 384
>gi|153792416|ref|NP_001093229.1| ubiquitin carboxyl-terminal hydrolase 3 [Equus caballus]
gi|148529824|gb|ABQ82144.1| ubiquitin specific peptidase 3 [Equus caballus]
Length = 520
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 117/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 222 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 281
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 282 GVSRSAILQENSTLSPSNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 341
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 342 LDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 401
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E +C +L + V+
Sbjct: 402 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVV 461
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ V AY++ Y
Sbjct: 462 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEDTVVKAKAYILFY 508
>gi|353232926|emb|CCD80281.1| ubiquitin-specific peptidase 22 (C19 family) [Schistosoma mansoni]
Length = 550
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 49/156 (31%), Positives = 76/156 (48%), Gaps = 16/156 (10%)
Query: 65 LELSLDIYQL--SSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFIL 122
L+LSLD+ Q +SL LG +F E + D L C +C A KQFS+ P V
Sbjct: 389 LDLSLDVIQRGSTSLQACLGSYFRPELI--DGLIWCSQCNIGRPAVKQFSLLHLPNVLCF 446
Query: 123 LLKRFNYLCLKISCAVQVPLYLEFGKFMHC---------RRNLVSAVIHHGSSSFSGHYN 173
LKR ++ KI+ ++ P+ L+ ++H + + AV++H + SGHY
Sbjct: 447 YLKRCHHD-TKINTSITFPVELDMAPYLHQIVGDQSAWYDKYSLYAVLNHSGQTNSGHYT 505
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
S+ D +V + NL V T+AYV++Y
Sbjct: 506 AYIRVGPTSWCLCDDQKVVSVNLNDVLHTDAYVLLY 541
>gi|406602917|emb|CCH45581.1| Ubiquitin carboxyl-terminal hydrolase [Wickerhamomyces ciferrii]
Length = 358
Score = 65.1 bits (157), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 76/157 (48%), Gaps = 16/157 (10%)
Query: 65 LELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILL 123
++LSL+I Q ++ + L F E L D Y C KC +T ATKQ SI K P V L
Sbjct: 199 IDLSLEISGQNDNVVDCLRNFTQTEQL--DIKYSCSKCNQRTNATKQLSILKFPNVLSLQ 256
Query: 124 LKRF--NYLCLKISCAVQVPLYLEFGKFMHCRRNL---------VSAVIHHGSSSFSGHY 172
LKRF N +KI ++ P+++ +F N+ + AV+ H S +GHY
Sbjct: 257 LKRFKHNNQSIKIESFIKFPMFINMSEFATISNNVPQAGALNYELFAVVCHIGSVNTGHY 316
Query: 173 NCIGSTSSGSYHYFGDDRVQASNLQQVT--NAYVVIY 207
+ + G + F D V +QV+ AY++ Y
Sbjct: 317 ITVIKNNEGKWFRFDDSVVTLLEWEQVSKLQAYLLFY 353
>gi|256084798|ref|XP_002578613.1| ubiquitin-specific peptidase 22 (C19 family) [Schistosoma mansoni]
Length = 489
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 66/250 (26%), Positives = 103/250 (41%), Gaps = 59/250 (23%)
Query: 14 SAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL----------------- 56
+ +P ++ + L A H Y D+HEFL+ L+ IH +
Sbjct: 234 TPFVPNNLLYAIWLHASHLAGYEQRDAHEFLITLLTLIHGHLVGEESPHDHDVSSSRESS 293
Query: 57 ----------------KVIS--GSNN--------LELSLDIYQL--SSLDEALGQFFAKE 88
VIS G + L+LSLD+ Q +SL LG +F E
Sbjct: 294 DSCDCIVHQVFFGDLESVISYEGCEHRSSTVDPFLDLSLDVIQRGSTSLQACLGSYFRPE 353
Query: 89 YLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPLYLEFGK 148
+ D L C +C A KQFS+ P V LKR ++ KI+ ++ P+ L+
Sbjct: 354 LI--DGLIWCSQCNIGRPAVKQFSLLHLPNVLCFYLKRCHHD-TKINTSITFPVELDMAP 410
Query: 149 FMH---------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV 199
++H + + AV++H + SGHY S+ D +V + NL V
Sbjct: 411 YLHQIVGDQSAWYDKYSLYAVLNHSGQTNSGHYTAYIRVGPTSWCLCDDQKVVSVNLNDV 470
Query: 200 --TNAYVVIY 207
T+AYV++Y
Sbjct: 471 LHTDAYVLLY 480
>gi|255947126|ref|XP_002564330.1| Pc22g02860 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211591347|emb|CAP97574.1| Pc22g02860 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 766
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P V L L
Sbjct: 305 LDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRVLALHL 364
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 365 KRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 424
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 425 AIIKTEDRGWLLFDDELVEPVDKSYVRNFFGDRPGLACAYVLFYQ 469
>gi|391346587|ref|XP_003747554.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like
[Metaseiulus occidentalis]
Length = 332
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 74/285 (25%), Positives = 112/285 (39%), Gaps = 79/285 (27%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH----------------- 52
++ GSAI P ++++ A F Y +D+ EFL YL++G+H
Sbjct: 50 SKDGSAISPTEFRSQIQKYAPRFMGYSQQDAQEFLRYLLQGLHEDVNRVRIQPRGTCLPE 109
Query: 53 ---------------RSYLKV--------------------------ISGSNNLELSLDI 71
R YL+V ++ +LSL I
Sbjct: 110 IDGSLSDHQKAAESWRRYLRVDDSRIVDLFVGQLKSTLKCSECGHKSVTFDPFWDLSLPI 169
Query: 72 YQ----LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF 127
S+L + L F +E L D C++C + TK SI K P + +L LKRF
Sbjct: 170 SDSRCTASTLQQCLEYFTKEEVLDGDEKPTCDQCKKRQRMTKNLSIWKCPKILVLHLKRF 229
Query: 128 N---YLCLKISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHHGSSSFSGHY--NC 174
K+ VQ PL L+ FM C+ NL+ V +H S+ SGHY C
Sbjct: 230 GNSERYRSKLETNVQFPLRNLDISAFMSNGGDSHFCKYNLI-GVSNHSGSTHSGHYTATC 288
Query: 175 IGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIYELLPSSLHHL 217
+ + ++ D RV +V + AYV+ YEL ++ L
Sbjct: 289 LNPINR-QWYSCNDARVSEVGESRVVSSEAYVLFYELDGTTFSRL 332
>gi|239611216|gb|EEQ88203.1| ubiquitin C-terminal hydrolase CreB [Ajellomyces dermatitidis ER-3]
Length = 786
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F +E L N + C+ CG EA K+ I++ P + L L
Sbjct: 245 LDLSVDLDQHSSVTSCLRKFSEEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 304
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P YL + L + V+H G + GHY
Sbjct: 305 KRFKYTEDLQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 364
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 365 AIIKTEDRGWLLFDDEMVEPVDKNYVRNFFGDRPGLACAYVLFYQ 409
>gi|330921681|ref|XP_003299523.1| hypothetical protein PTT_10531 [Pyrenophora teres f. teres 0-1]
gi|311326748|gb|EFQ92362.1| hypothetical protein PTT_10531 [Pyrenophora teres f. teres 0-1]
Length = 764
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 47 LIEGIHRSYLKVISGSNN-------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCE 99
L EG S + ++ N L+LS+D+ Q SS+ L +F +E L N + C+
Sbjct: 294 LFEGTLTSETRCLTCENTSQRDEAFLDLSVDLEQHSSVTSCLRKFSEEEMLCERNKFHCD 353
Query: 100 KCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQVPLYLEFGKFMHCRR 154
CG EA K+ I++ P + L LKRF Y K+ V P YL
Sbjct: 354 NCGGLQEAEKRMKIKRLPKILALHLKRFKYTEDLQRLQKLFHRVVYPFYLRLFNTTDDAE 413
Query: 155 N------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN------- 201
+ L + V+H G + GHY I T + F D+ V+ + V N
Sbjct: 414 DPDRLYELYAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDEMVEPVDKAYVRNFFGGENV 473
Query: 202 ---AYVVIYE 208
AYV+ Y+
Sbjct: 474 LACAYVLFYQ 483
>gi|315056421|ref|XP_003177585.1| ubiquitin carboxyl-terminal hydrolase 13 [Arthroderma gypseum CBS
118893]
gi|311339431|gb|EFQ98633.1| ubiquitin carboxyl-terminal hydrolase 13 [Arthroderma gypseum CBS
118893]
Length = 876
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F +E L N + C+ CG EA K+ I++ P + L L
Sbjct: 319 LDLSVDLEQHSSVTSCLRKFSQEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 378
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P YL + L + V+H G + GHY
Sbjct: 379 KRFKYTEDQQKLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 438
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 439 AIIKTEDRGWLLFDDEMVEPVDKSYVRNFFGDKPGQACAYVLFYQ 483
>gi|225468498|ref|XP_002270407.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Vitis vinifera]
Length = 369
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LSLDI Q SS+ L F + E L ++ + C+KC EA K+ I+KPP + ++ L
Sbjct: 197 LDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHL 256
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMH---CRRNLVSAVIHHGSSSFSGHYNCIG 176
KRF Y+ K+S V PL L+ + +L + V+H GS GHY +
Sbjct: 257 KRFKYIEQLGRYKKLSYRVVFPLELKLSNTVEDADSEYSLFAVVVHVGSGPNHGHYVSL- 315
Query: 177 STSSGSYHYFGDDRVQ 192
S + +F D+ V+
Sbjct: 316 VKSHNHWLFFDDENVE 331
>gi|431895934|gb|ELK05352.1| Ubiquitin carboxyl-terminal hydrolase 3 [Pteropus alecto]
Length = 520
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 116/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 222 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 281
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 282 GVSRSAILQENSTLSASNKCCINGASTVVTAIFGGFLQNEVNCLICGTESRKFDPFLDLS 341
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 342 LDIPSQFRNKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 401
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E C +L + V+
Sbjct: 402 KLPKVLCLHLKRFHWTAYLRNKVDIYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVV 461
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ V AY++ Y
Sbjct: 462 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEDTVVKAKAYILFY 508
>gi|147810044|emb|CAN67091.1| hypothetical protein VITISV_006756 [Vitis vinifera]
Length = 366
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LSLDI Q SS+ L F + E L ++ + C+KC EA K+ I+KPP + ++ L
Sbjct: 194 LDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHL 253
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMH---CRRNLVSAVIHHGSSSFSGHYNCIG 176
KRF Y+ K+S V PL L+ + +L + V+H GS GHY +
Sbjct: 254 KRFKYIEQLGRYKKLSYRVVFPLELKLSNTVEDADSEYSLFAVVVHVGSGPNHGHYVSL- 312
Query: 177 STSSGSYHYFGDDRVQ 192
S + +F D+ V+
Sbjct: 313 VKSHNHWLFFDDENVE 328
>gi|356525469|ref|XP_003531347.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like isoform 1
[Glycine max]
Length = 369
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LSLDI Q SS+ L F + E L ++ + C+KC EA K+ I+KPP + ++ L
Sbjct: 197 LDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHL 256
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMH---CRRNLVSAVIHHGSSSFSGHYNCIG 176
KRF Y+ K+S V PL L+ + +L + V+H GS GHY +
Sbjct: 257 KRFKYMEQLGRYKKLSYRVVFPLELKLSNTVEDADIEYSLFAVVVHVGSGPNHGHYVSL- 315
Query: 177 STSSGSYHYFGDDRVQ 192
S + +F D+ V+
Sbjct: 316 VKSHNHWLFFDDENVE 331
>gi|356512699|ref|XP_003525054.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Glycine
max]
Length = 369
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LSLDI Q SS+ L F + E L ++ + C+KC EA K+ I+KPP + ++ L
Sbjct: 197 LDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHL 256
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMH---CRRNLVSAVIHHGSSSFSGHYNCIG 176
KRF Y+ K+S V PL L+ + +L + V+H GS GHY +
Sbjct: 257 KRFKYMEQLGRYKKLSYRVVFPLELKLSNTVEDADIEYSLFAVVVHVGSGPNHGHYVSL- 315
Query: 177 STSSGSYHYFGDDRVQ 192
S + +F D+ V+
Sbjct: 316 VKSHNHWLFFDDENVE 331
>gi|327348777|gb|EGE77634.1| ubiquitin C-terminal hydrolase CreB [Ajellomyces dermatitidis ATCC
18188]
Length = 858
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F +E L N + C+ CG EA K+ I++ P + L L
Sbjct: 317 LDLSVDLDQHSSVTSCLRKFSEEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 376
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P YL + L + V+H G + GHY
Sbjct: 377 KRFKYTEDLQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 436
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 437 AIIKTEDRGWLLFDDEMVEPVDKNYVRNFFGDRPGLACAYVLFYQ 481
>gi|340508519|gb|EGR34208.1| ubiquitin carboxyl-terminal hydrolase family protein, putative
[Ichthyophthirius multifiliis]
Length = 2201
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 45/142 (31%), Positives = 69/142 (48%), Gaps = 18/142 (12%)
Query: 75 SSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC--- 131
S+L E L F E L DN Y CEKC K KQ SI+K P + I++LKRF++
Sbjct: 1531 STLGECLDSFVQGEMLDGDNSYFCEKCNAKVPTLKQQSIKKLPNLLIIVLKRFHFDIESM 1590
Query: 132 --LKISCAVQVPLYLEFGKFM------------HCRRNLVSAVIHHGSSSFSGHYNCIGS 177
KI+ + P L+ ++ + + L +IH G+S SGHY I
Sbjct: 1591 QKTKINAYCEFPFDLDMKQYTKLNEENEQYGNEYFQYKLRGIIIHQGTSD-SGHYYSIIQ 1649
Query: 178 TSSGSYHYFGDDRVQASNLQQV 199
G++ F D ++Q ++Q++
Sbjct: 1650 EKEGNWMEFNDMQIQPFDIQEI 1671
>gi|296826590|ref|XP_002851002.1| ubiquitin C-terminal hydrolase CreB [Arthroderma otae CBS 113480]
gi|238838556|gb|EEQ28218.1| ubiquitin C-terminal hydrolase CreB [Arthroderma otae CBS 113480]
Length = 796
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F +E L N + C+ CG EA K+ I++ P + L L
Sbjct: 251 LDLSVDLEQHSSVTSCLRKFSEEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 310
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P YL + L + V+H G + GHY
Sbjct: 311 KRFKYTEDLQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 370
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 371 AIIKTEDRGWLLFDDEMVEPVDKSYVRNFFGDRPGQACAYVLFYQ 415
>gi|388580652|gb|EIM20965.1| cysteine proteinase, partial [Wallemia sebi CBS 633.66]
Length = 304
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 64/256 (25%), Positives = 101/256 (39%), Gaps = 53/256 (20%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNL- 65
+ Q + I + + KL+ F +D+HEFL YL+ + ++ S+ L
Sbjct: 50 STQPKRTGVIQTKSFVEKLRQENELFRSTTHQDAHEFLNYLLNRVAEDLTRLTKSSHTLV 109
Query: 66 ----------------------------ELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQ 97
+LS+++ + S++ E L F +E L + N +
Sbjct: 110 HSLFEGTLTNETKCMTCENITHRDESFLDLSINVEEDSNVTECLSNFSVREMLCQKNKFF 169
Query: 98 CEKCGYKTEATKQFSIEKPPIVFILLLKRFNY-----LCLKISCAVQVPLYLEFGKFMH- 151
C+ CG EA K I+K P + L LKRF Y +K+S V P LE G
Sbjct: 170 CDSCGGLQEAEKWMRIKKLPNILALHLKRFKYQEDQSRYIKLSYRVAFPFLLEPGSLSST 229
Query: 152 CRR--------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN-- 201
C+ L + +IH GS GHY I S + F DD+V + +++
Sbjct: 230 CQGAENSDKMYRLFAVIIHIGSGPHHGHYVSI-IKSYDRWVLFDDDKVSVVDEHELSKFF 288
Query: 202 -------AYVVIYELL 210
YV YE +
Sbjct: 289 GNDPAGEGYVFFYETV 304
>gi|291402890|ref|XP_002718220.1| PREDICTED: ubiquitin thiolesterase 3 [Oryctolagus cuniculus]
Length = 520
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 119/288 (41%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 222 FRKTLCALWQGSQTAFSPESLFYVIWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 281
Query: 50 GIHRSYL-----------------------------------KVISGSNN------LELS 68
G+ RS + +I G+ + L+LS
Sbjct: 282 GVSRSAVLQENSTLSASSKCCVNGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 341
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 342 LDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 401
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E +C +L + V+
Sbjct: 402 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSDPENCLYDLAAVVV 461
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 462 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVGKAKAYILFY 508
>gi|354474362|ref|XP_003499400.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus
griseus]
Length = 502
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 118/287 (41%), Gaps = 82/287 (28%)
Query: 2 RKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE-----------G 50
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++ G
Sbjct: 205 RKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNG 264
Query: 51 IHRSYL----KVISGSNN-------------------------------------LELSL 69
+ RS + +S +N L+LSL
Sbjct: 265 VPRSSILQENSTLSANNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSL 324
Query: 70 DIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
DI + SL + L F E L LY C KC K ++TK+F I+K
Sbjct: 325 DIPSQFRSKRSKNQESGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQK 384
Query: 116 PPIVFILLLKRFN---YLCLKISCAVQVPLY-LEFGKFM---------HCRRNLVSAVIH 162
P V L LKRF+ YL K+ V+ PL L+ ++ C +L + V+H
Sbjct: 385 LPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENIGPESCLYDLAAVVVH 444
Query: 163 HGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 445 HGSGVGSGHYTAY-ATHEGRWFHFNDSTVTVTDEETVGKAKAYILFY 490
>gi|224082308|ref|XP_002306642.1| predicted protein [Populus trichocarpa]
gi|222856091|gb|EEE93638.1| predicted protein [Populus trichocarpa]
Length = 1084
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 49/143 (34%), Positives = 73/143 (51%), Gaps = 14/143 (9%)
Query: 66 ELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLK 125
EL +++ L SLDE+L Q+ + E L +N Y CE C + +AT + + P V LK
Sbjct: 245 ELQMNVKGLKSLDESLDQYLSVEQLHGENQYNCELCKSRVDATHRIRLRTLPDVLNFQLK 304
Query: 126 RFNYLC-----LKISCAVQVPLYLEFGKFMHCRRNL-----VSAV-IHHGSSSFSGHYNC 174
R+ +L KI+ A P L+ G+ + L +SAV IH G++ SGHY
Sbjct: 305 RYEFLPKTTTRKKITSAFGFPGELDMGRRLSEPSQLEWIYDLSAVLIHKGTAVNSGHYIA 364
Query: 175 -IGSTSSGSYHYFGDDRVQASNL 196
I ++G + F D+ V SNL
Sbjct: 365 HIKDENTGQWWEFDDEHV--SNL 385
>gi|344251056|gb|EGW07160.1| Ubiquitin carboxyl-terminal hydrolase 3 [Cricetulus griseus]
Length = 435
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 118/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 137 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 196
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S +N L+LS
Sbjct: 197 GVPRSSILQENSTLSANNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 256
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 257 LDIPSQFRSKRSKNQESGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 316
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPLY-LEFGKFM---------HCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL L+ ++ C +L + V+
Sbjct: 317 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENIGPESCLYDLAAVVV 376
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 377 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTVTDEETVGKAKAYILFY 423
>gi|169602479|ref|XP_001794661.1| hypothetical protein SNOG_04241 [Phaeosphaeria nodorum SN15]
gi|160706178|gb|EAT88001.2| hypothetical protein SNOG_04241 [Phaeosphaeria nodorum SN15]
Length = 733
Score = 64.7 bits (156), Expect = 3e-08, Method: Composition-based stats.
Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 47 LIEGIHRSYLKVISGSNN-------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCE 99
L EG S + ++ N L+LS+D+ Q SS+ L +F +E L N + C+
Sbjct: 297 LFEGTLTSETRCLTCENTSQRDEAFLDLSVDLEQHSSVTSCLRKFSEEEMLCERNKFHCD 356
Query: 100 KCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQVPLYLEFGKFMHCRR 154
CG EA K+ I++ P + L LKRF Y K+ V P YL
Sbjct: 357 NCGGLQEAEKRMKIKRLPKILALHLKRFKYTEDLQRLQKLFHRVVYPFYLRLFNTTDDAE 416
Query: 155 N------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN------- 201
+ L + V+H G + GHY I T + F D+ V+ + V N
Sbjct: 417 DPDRLYELYAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDEMVEPVDKAYVRNFFGGEGV 476
Query: 202 ---AYVVIYE 208
AYV+ Y+
Sbjct: 477 LACAYVLFYQ 486
>gi|356525471|ref|XP_003531348.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like isoform 2
[Glycine max]
Length = 383
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 70/136 (51%), Gaps = 9/136 (6%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LSLDI Q SS+ L F + E L ++ + C+KC EA K+ I+KPP + ++ L
Sbjct: 211 LDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHL 270
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMH---CRRNLVSAVIHHGSSSFSGHYNCIG 176
KRF Y+ K+S V PL L+ + +L + V+H GS GHY +
Sbjct: 271 KRFKYMEQLGRYKKLSYRVVFPLELKLSNTVEDADIEYSLFAVVVHVGSGPNHGHYVSL- 329
Query: 177 STSSGSYHYFGDDRVQ 192
S + +F D+ V+
Sbjct: 330 VKSHNHWLFFDDENVE 345
>gi|302665211|ref|XP_003024218.1| ubiquitin C-terminal hydrolase CreB [Trichophyton verrucosum HKI
0517]
gi|291188264|gb|EFE43607.1| ubiquitin C-terminal hydrolase CreB [Trichophyton verrucosum HKI
0517]
Length = 876
Score = 64.7 bits (156), Expect = 4e-08, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F +E L N + C+ CG EA K+ I++ P + L L
Sbjct: 320 LDLSVDLEQHSSVTSCLRKFSQEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 379
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P YL + L + V+H G + GHY
Sbjct: 380 KRFKYTEDQQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 439
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 440 AIIKTEDRGWLLFDDEMVEPVDKSYVRNFFGDKPGQACAYVLFYQ 484
>gi|452001543|gb|EMD94002.1| hypothetical protein COCHEDRAFT_1222608 [Cochliobolus
heterostrophus C5]
Length = 745
Score = 64.3 bits (155), Expect = 4e-08, Method: Composition-based stats.
Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 47 LIEGIHRSYLKVISGSNN-------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCE 99
L EG S + ++ N L+LS+D+ Q SS+ L +F +E L N + C+
Sbjct: 294 LFEGTLTSETRCLTCENTSQRDEAFLDLSVDLEQHSSVTSCLRKFSEEEMLCERNKFHCD 353
Query: 100 KCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQVPLYLEFGKFMHCRR 154
CG EA K+ I++ P + L LKRF Y K+ V P YL
Sbjct: 354 NCGGLQEAEKRMKIKRLPKILALHLKRFKYTEDLQRLQKLFHRVVYPFYLRLFNTTDDAE 413
Query: 155 N------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN------- 201
+ L + V+H G + GHY I T + F D+ V+ + V N
Sbjct: 414 DPDRLYELYAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDEMVEPVDKAYVRNFFGGENV 473
Query: 202 ---AYVVIYE 208
AYV+ Y+
Sbjct: 474 LACAYVLFYQ 483
>gi|397479331|ref|XP_003810977.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 12-like [Pan paniscus]
Length = 365
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 66/258 (25%), Positives = 97/258 (37%), Gaps = 63/258 (24%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEG---------------- 50
A Q + I P+ I +L+ F+ Y +D HEFL YL+
Sbjct: 88 ATQKKKXGVIPPKKFITRLQKEDELFDNYMQQDPHEFLNYLLNTIADILQEERKQEKQNG 147
Query: 51 --------------------IHRSYLKVISGSNN--------------LELSLDIYQLSS 76
+H + ++ L+LS+D+ Q +S
Sbjct: 148 RLPNGNINNENNNSTPDPMRVHEIFQGTLTNETRCLTCETMSSKDEDFLDLSVDVEQNTS 207
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY-----LC 131
+ L F E L + Y CE+C K EA K+ + K P++ LKRF Y
Sbjct: 208 ITHCLRAFSNTETLCSEYKYYCEECRSKQEAHKRRKVXKLPMILAPHLKRFKYKDQLHRL 267
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GH CI S +
Sbjct: 268 TKLSYQVVFPLKLSLFNTSGDATNPDRMYSLVAVVVHCGSGPSRGH--CIVIVKSHDFWL 325
Query: 186 FGDDRVQASNLQQVTNAY 203
F DD V+ + Q + Y
Sbjct: 326 FDDDIVEKIDAQAIEEVY 343
>gi|116182392|ref|XP_001221045.1| hypothetical protein CHGG_01824 [Chaetomium globosum CBS 148.51]
gi|88186121|gb|EAQ93589.1| hypothetical protein CHGG_01824 [Chaetomium globosum CBS 148.51]
Length = 842
Score = 64.3 bits (155), Expect = 4e-08, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 74/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + SS+ L F A+E L N + C+ CG EA K+ ++K P V L L
Sbjct: 313 LDLSIDLEEHSSVTACLQSFSAEEMLCERNKFHCDHCGGLQEAEKRMKVKKLPKVLALHL 372
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G +++ GHY
Sbjct: 373 KRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTDDAEDPDRMYELYAVVVHIGGNAYHGHYV 432
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
+ T + F D+ V+ + V N AYV+ Y+
Sbjct: 433 AVIKTKDRGWLLFDDEMVEPVDKNFVRNFFGDKPGMACAYVLFYQ 477
>gi|296083782|emb|CBI23999.3| unnamed protein product [Vitis vinifera]
Length = 892
Score = 64.3 bits (155), Expect = 4e-08, Method: Composition-based stats.
Identities = 57/240 (23%), Positives = 103/240 (42%), Gaps = 50/240 (20%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--------------- 62
P I+++L I + Y + ED+HEF+ + I+ + L G
Sbjct: 184 PINILSRLPSIGGNLGYGKQEDAHEFMRFAIDTMQSVCLDEFGGEKSVHPSSQETTLIQH 243
Query: 63 -----------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQC 98
N ++L+++I+ +SL+E L QF E+L +N+Y+C
Sbjct: 244 IFGGHLQSQVICTKCSKISNQYENMMDLTVEIHGDAASLEECLDQFTVTEWLHGENMYKC 303
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCR---- 153
+ C +A+K+ ++ P + + LKRF K++ V P L+ +M
Sbjct: 304 DGCNDYVKASKRLTVRHAPNILTIALKRFQSGRFGKLNKRVTFPETLDLSPYMSKAVVGT 363
Query: 154 --RNLVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYVVIY 207
L + V+H ++SF GHY C G+++ D +V L V + AY+++Y
Sbjct: 364 DVYKLYAVVVHLDMLNASFFGHYVCYTKDFGGNWYRIDDCKVTRVELDDVLSQGAYMLLY 423
>gi|451849727|gb|EMD63030.1| hypothetical protein COCSADRAFT_191282 [Cochliobolus sativus
ND90Pr]
Length = 745
Score = 64.3 bits (155), Expect = 4e-08, Method: Composition-based stats.
Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 47 LIEGIHRSYLKVISGSNN-------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCE 99
L EG S + ++ N L+LS+D+ Q SS+ L +F +E L N + C+
Sbjct: 294 LFEGTLTSETRCLTCENTSQRDEAFLDLSVDLEQHSSVTSCLRKFSEEEMLCERNKFHCD 353
Query: 100 KCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQVPLYLEFGKFMHCRR 154
CG EA K+ I++ P + L LKRF Y K+ V P YL
Sbjct: 354 NCGGLQEAEKRMKIKRLPKILALHLKRFKYTEDLQRLQKLFHRVVYPFYLRLFNTTDDAE 413
Query: 155 N------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN------- 201
+ L + V+H G + GHY I T + F D+ V+ + V N
Sbjct: 414 DPDRLYELYAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDEMVEPVDKAYVRNFFGGENV 473
Query: 202 ---AYVVIYE 208
AYV+ Y+
Sbjct: 474 LACAYVLFYQ 483
>gi|307214716|gb|EFN89645.1| Ubiquitin carboxyl-terminal hydrolase 48 [Harpegnathos saltator]
Length = 919
Score = 64.3 bits (155), Expect = 4e-08, Method: Composition-based stats.
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 10/134 (7%)
Query: 69 LDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFN 128
LD+ ++L EA+ ++ ++E L N Y C C K +A + +E P + L RF
Sbjct: 239 LDLQLAATLKEAIDKYLSEEQLTGANQYHCTTCNDKKDARRFIRLETLPDTLNIQLMRFV 298
Query: 129 Y-----LCLKISCAVQVPLYLEFGKFMHCR-----RNLVSAVIHHGSSSFSGHYNCIGST 178
+ K++ +Q P L+ +++ C+ +LV+ + H G S+ SGHY
Sbjct: 299 FHRDSGQKKKLNSYIQFPEDLDMSEYVRCQPQTHLYSLVAVLSHKGPSAHSGHYIANICN 358
Query: 179 SSGSYHYFGDDRVQ 192
SSG ++ F DD+V+
Sbjct: 359 SSGEWYQFSDDKVE 372
>gi|256070419|ref|XP_002571540.1| ubiquitin-specific peptidase 46 (C19 family) [Schistosoma mansoni]
Length = 414
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 113/282 (40%), Gaps = 70/282 (24%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH------------------------- 52
P+ I KLK F+ Y +D+HEFL YL+ I
Sbjct: 104 PKRFIQKLKRENGLFDNYLQQDAHEFLNYLLNKIADIIRAEQQPIGVDAEDPSDCEMTDV 163
Query: 53 ---------RSYL-KVISGS------------------NNLELSLDIYQLSSLDEALGQF 84
R+++ ++ GS N L+LS+D+ + + L F
Sbjct: 164 SESNRKHSGRNWIHEIFQGSLTNETRCLNCDNVRTKEENFLDLSVDVGENVDISYCLRCF 223
Query: 85 FAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY-----LCLKISCAVQ 139
E + DN Y CE C K EA ++ I+KPP++ L LKRF Y +K+S V
Sbjct: 224 SDTETMRSDNKYYCEFCRCKQEAQRRMRIKKPPLLLALHLKRFKYSENLNRFIKLSYRVA 283
Query: 140 VPLYLEFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
P+ L NL++ V+H GS GHY + S G + F D+ V+
Sbjct: 284 FPMELRLFNMSSDSSNDDRLYNLMAVVVHSGSGPNRGHYVTL-VKSHGLWFLFDDELVEK 342
Query: 194 SNLQQVTNAYVVIYELLPSS-----LHHLNSSLHSSSPGSVE 230
+ + + + E SS L +L++ + SS+ + +
Sbjct: 343 IHRTNIEDFFGSSTETSKSSYTAYILFYLDAKVASSTSTATD 384
>gi|134055383|emb|CAK43937.1| unnamed protein product [Aspergillus niger]
Length = 774
Score = 64.3 bits (155), Expect = 4e-08, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P + L L
Sbjct: 318 LDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 377
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 378 KRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 437
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 438 SIIKTQDRGWLLFDDEMVEPVDKNYVRNFFGDKPGLACAYVLFYQ 482
>gi|429858292|gb|ELA33117.1| ubiquitin carboxyl-terminal hydrolase [Colletotrichum
gloeosporioides Nara gc5]
Length = 750
Score = 64.3 bits (155), Expect = 4e-08, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + SS+ L +F A+E L N + C+ CG EA K+ I++ P V L L
Sbjct: 327 LDLSIDLDEHSSVTSCLRKFSAEEMLCERNKFHCDHCGGLQEAEKRMKIKRLPKVLALHL 386
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G +++ GHY
Sbjct: 387 KRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTDDAEDPDRMYELYAVVVHIGGNAYHGHYV 446
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
+ T + F D+ V+ + V N AYV+ Y+
Sbjct: 447 SVIKTKDRGWVLFDDEMVEPVDKHFVRNFFGDKPGMACAYVLFYQ 491
>gi|58267246|ref|XP_570779.1| hypothetical protein [Cryptococcus neoformans var. neoformans
JEC21]
gi|57227013|gb|AAW43472.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 728
Score = 64.3 bits (155), Expect = 4e-08, Method: Composition-based stats.
Identities = 57/216 (26%), Positives = 90/216 (41%), Gaps = 27/216 (12%)
Query: 43 FLLYLIEGIHRSYLKVIS-------GSNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNL 95
F+ L +GI S K +S ++LS+DI Q S+ L QF + E +
Sbjct: 366 FVEALFQGITTSETKCLSCETISSRDEEFIDLSVDIEQHCSITSCLRQFSSDEMMSGREK 425
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRF----NYLCLKISCAVQVPLYL-EFGKFM 150
+ CE C EA + I++ P + + LKRF +Y +K+ V P L
Sbjct: 426 FSCESCSGHQEAKRSIRIKRLPPILAVHLKRFAHNESYRAIKLFYRVNHPTTLIPPNTTD 485
Query: 151 HCRR-----NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVT----- 200
+C +LV+ ++H G+ GHY + T SG + DD ++A Q+
Sbjct: 486 NCENPDQIYDLVAIMVHIGNGPVQGHYVTVKRTPSGRWVMCDDDNIEAIEENQLEYWLGN 545
Query: 201 ----NAYVVIYELLPSSLHHLNSSLHSSSP-GSVEP 231
YV+ Y+ + HL + P G EP
Sbjct: 546 RTQGQGYVLFYQARGITAEHLGLKVEKRKPNGVFEP 581
>gi|443718172|gb|ELU08917.1| hypothetical protein CAPTEDRAFT_127326, partial [Capitella teleta]
Length = 363
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 70/274 (25%), Positives = 105/274 (38%), Gaps = 68/274 (24%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYL-------IEGIHRSY---- 55
A Q + I P+ I +L+ F+ Y +D+HEFL YL ++G ++
Sbjct: 79 ATQKKKVGTIAPKKFIQRLRKENELFDNYMQQDAHEFLNYLLNTVADLLQGENKQLKGGG 138
Query: 56 -LKVISGSNN--------------------------------------------LELSLD 70
++G+ N L+LS+D
Sbjct: 139 KANAVNGATNHHQGNFHDNSKSDPTWVHNIFQGTLTNETRCLNCETVSSKDEDFLDLSVD 198
Query: 71 IYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL 130
+ Q +S+ L F + E L + Y CE C K EA K+ ++K P + L LKRF Y+
Sbjct: 199 VEQNTSITHCLRDFSSTETLCSEYKYYCEVCCSKQEAQKRMRVKKLPHILALHLKRFKYM 258
Query: 131 -----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTS 179
K+S V PL L N L++ VIH G+ GHY I S
Sbjct: 259 EQLNRYTKLSYRVVFPLELRLFNTSDDASNPDRLYDLIAVVIHCGTGPNRGHYISI-VKS 317
Query: 180 SGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
G + F DD V + + Y + +L SS
Sbjct: 318 HGLWLLFDDDIVDKIEVSAIEEFYGMTSDLQKSS 351
>gi|2894598|emb|CAA17132.1| putative protein [Arabidopsis thaliana]
gi|7268541|emb|CAB78791.1| putative protein [Arabidopsis thaliana]
Length = 1082
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 100/235 (42%), Gaps = 45/235 (19%)
Query: 16 IIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE-----GIHRSYLK------------V 58
I P + L + F+ Y+ ED+HEFL +E G R+ + +
Sbjct: 628 IAPYFFFDNLNYFSPDFQRYQQEDAHEFLQAFLEKLEICGSDRTSFRGDITSQDVFSGRL 687
Query: 59 ISG-------------SNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKT 105
ISG ++ LSL+I + +L AL F E L D C+ C K
Sbjct: 688 ISGLRCCNCDYVSETYEKSVGLSLEIEDVDTLGSALESFTRVEKL--DEQLTCDNCNEKV 745
Query: 106 EATKQFSIEKPPIVFILLLKRFNYLCL---KISCAVQVPLYLEFGKFM-HCRRNLVSA-- 159
KQ ++K P+V LKRF L KI V++PL ++ +M + + N VS
Sbjct: 746 SKEKQLLLDKLPLVATFHLKRFKNNGLYMEKIYKHVKIPLEIDLQPYMRNIQENEVSTKY 805
Query: 160 -----VIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
V H G S GHY+ ++ +H+F D +V + V ++Y++ Y
Sbjct: 806 HLYALVEHFGYSVAYGHYSSYVRSAPKIWHHFDDSKVTRIDEDMVLSQDSYILFY 860
>gi|358365313|dbj|GAA81935.1| carbon catabolite repression protein B [Aspergillus kawachii IFO
4308]
Length = 747
Score = 64.3 bits (155), Expect = 4e-08, Method: Composition-based stats.
Identities = 57/206 (27%), Positives = 91/206 (44%), Gaps = 29/206 (14%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P + L L
Sbjct: 290 LDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 349
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 350 KRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 409
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE-------LLPSSLHH 216
I T + F D+ V+ + V N AYV+ Y+ L + +
Sbjct: 410 SIIKTQDRGWLLFDDEMVEPVDKNYVRNFFGDKPGLACAYVLFYQETTLEAVLKEQEMEN 469
Query: 217 LNSSLHSSSPGSVEPRTH-HRNYMAH 241
+N+S ++ +V+P H + +AH
Sbjct: 470 MNASAADANEAAVKPNGFPHPSGLAH 495
>gi|350645319|emb|CCD59942.1| ubiquitin-specific peptidase 46 (C19 family) [Schistosoma mansoni]
Length = 414
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 71/282 (25%), Positives = 113/282 (40%), Gaps = 70/282 (24%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH------------------------- 52
P+ I KLK F+ Y +D+HEFL YL+ I
Sbjct: 104 PKKFIQKLKRENGLFDNYLQQDAHEFLNYLLNKIADIIRAEQQPIGVDAEDPSDCEMTDV 163
Query: 53 ---------RSYL-KVISGS------------------NNLELSLDIYQLSSLDEALGQF 84
R+++ ++ GS N L+LS+D+ + + L F
Sbjct: 164 SESNRKHSGRNWIHEIFQGSLTNETRCLNCDNVRTKEENFLDLSVDVGENVDISYCLRCF 223
Query: 85 FAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY-----LCLKISCAVQ 139
E + DN Y CE C K EA ++ I+KPP++ L LKRF Y +K+S V
Sbjct: 224 SDTETMRSDNKYYCEFCRCKQEAQRRMRIKKPPLLLALHLKRFKYSENLNRFIKLSYRVA 283
Query: 140 VPLYLEFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
P+ L NL++ V+H GS GHY + S G + F D+ V+
Sbjct: 284 FPMELRLFNMSSDSSNDDRLYNLMAVVVHSGSGPNRGHYVTL-VKSHGLWFLFDDELVEK 342
Query: 194 SNLQQVTNAYVVIYELLPSS-----LHHLNSSLHSSSPGSVE 230
+ + + + E SS L +L++ + SS+ + +
Sbjct: 343 IHRTNIEDFFGSSTETSKSSYTAYILFYLDAKVASSTSTATD 384
>gi|18414985|ref|NP_567544.1| ubiquitin carboxyl-terminal hydrolase 20 [Arabidopsis thaliana]
gi|75262803|sp|Q9FPS7.1|UBP20_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 20; AltName:
Full=Deubiquitinating enzyme 20; Short=AtUBP20; AltName:
Full=Ubiquitin thioesterase 20; AltName:
Full=Ubiquitin-specific-processing protease 20
gi|11993480|gb|AAG42758.1|AF302668_1 ubiquitin-specific protease 20 [Arabidopsis thaliana]
gi|332658563|gb|AEE83963.1| ubiquitin carboxyl-terminal hydrolase 20 [Arabidopsis thaliana]
Length = 695
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 64/236 (27%), Positives = 100/236 (42%), Gaps = 45/236 (19%)
Query: 15 AIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE-----GIHRSYLK------------ 57
I P + L + F+ Y+ ED+HEFL +E G R+ +
Sbjct: 240 PIAPYFFFDNLNYFSPDFQRYQQEDAHEFLQAFLEKLEICGSDRTSFRGDITSQDVFSGR 299
Query: 58 VISG-------------SNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYK 104
+ISG ++ LSL+I + +L AL F E L D C+ C K
Sbjct: 300 LISGLRCCNCDYVSETYEKSVGLSLEIEDVDTLGSALESFTRVEKL--DEQLTCDNCNEK 357
Query: 105 TEATKQFSIEKPPIVFILLLKRFNYLCL---KISCAVQVPLYLEFGKFM-HCRRNLVSA- 159
KQ ++K P+V LKRF L KI V++PL ++ +M + + N VS
Sbjct: 358 VSKEKQLLLDKLPLVATFHLKRFKNNGLYMEKIYKHVKIPLEIDLQPYMRNIQENEVSTK 417
Query: 160 ------VIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
V H G S GHY+ ++ +H+F D +V + V ++Y++ Y
Sbjct: 418 YHLYALVEHFGYSVAYGHYSSYVRSAPKIWHHFDDSKVTRIDEDMVLSQDSYILFY 473
>gi|310791022|gb|EFQ26555.1| ubiquitin carboxyl-terminal hydrolase [Glomerella graminicola
M1.001]
Length = 753
Score = 64.3 bits (155), Expect = 4e-08, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + SS+ L +F A+E L N + C+ CG EA K+ I++ P V L L
Sbjct: 326 LDLSIDLEEHSSVTSCLRKFSAEEMLCERNKFHCDHCGGLQEAEKRMKIKRLPKVLALHL 385
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G +++ GHY
Sbjct: 386 KRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTDDAEDPDRLYELYAVVVHIGGNAYHGHYV 445
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
+ T + F D+ V+ + V N AYV+ Y+
Sbjct: 446 SVIKTKDRGWVLFDDEMVEPVDKHFVRNFFGDKPGMACAYVLFYQ 490
>gi|194376096|dbj|BAG62807.1| unnamed protein product [Homo sapiens]
Length = 476
Score = 64.3 bits (155), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 117/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 178 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 237
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 238 GVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 297
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 298 LDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 357
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E C +L + V+
Sbjct: 358 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVV 417
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 418 HHGSGVGSGHYIAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 464
>gi|395822291|ref|XP_003784454.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Otolemur garnettii]
Length = 520
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 117/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH-------- 52
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++ +H
Sbjct: 222 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQDGFN 281
Query: 53 ---------------RSYLKVISGSNN-----------------------------LELS 68
S I+GS+ L+LS
Sbjct: 282 GVSHSAILQENSTLSTSNKCCINGSSTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 341
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 342 LDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 401
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E +C +L + V+
Sbjct: 402 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVV 461
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 462 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|154309531|ref|XP_001554099.1| hypothetical protein BC1G_07236 [Botryotinia fuckeliana B05.10]
Length = 773
Score = 64.3 bits (155), Expect = 5e-08, Method: Composition-based stats.
Identities = 42/139 (30%), Positives = 67/139 (48%), Gaps = 11/139 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + SS+ L +F A+E L N + C+ CG EA K+ I+ P V +L L
Sbjct: 320 LDLSIDLEKNSSVTSCLQKFSAEEMLCEKNKFHCDTCGGLQEAEKRMKIKTLPKVLVLHL 379
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF + K+ V P +L + L + V+H G+++F GHY
Sbjct: 380 KRFKWTDDLTRLQKLFYTVNYPYHLRMFNTTDDAEDPDRLYELYAVVVHIGTNAFHGHYV 439
Query: 174 CIGSTSSGSYHYFGDDRVQ 192
+ T + F D+ V+
Sbjct: 440 AVIKTEDRGWLLFDDEMVE 458
>gi|379030633|ref|NP_001243801.1| inactive ubiquitin carboxyl-terminal hydrolase 17-like protein 8
[Homo sapiens]
gi|187653909|sp|P0C7I0.1|U17L8_HUMAN RecName: Full=Inactive ubiquitin carboxyl-terminal hydrolase
17-like protein 8
Length = 530
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 98/234 (41%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYPCGLCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+ ++ V IL+LKRF + K++ VQ P L+ +M +
Sbjct: 259 QRAPASNTLTLHTSAKVLILVLKRFCDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +G+Y G ++ D V A ++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGYYFSYVKAQEGQWYKMDDAEVTACSITSVLSQQAYVLFY 372
>gi|297850108|ref|XP_002892935.1| ubiquitin-specific protease 15 [Arabidopsis lyrata subsp. lyrata]
gi|297338777|gb|EFH69194.1| ubiquitin-specific protease 15 [Arabidopsis lyrata subsp. lyrata]
Length = 926
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 61/247 (24%), Positives = 103/247 (41%), Gaps = 50/247 (20%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS-------- 62
ESG + I++ ++ I ED+HEFL L+ + L+ + G
Sbjct: 499 ESGGPLSASRILSHMRSINCQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQ 558
Query: 63 ------------------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLV 91
N ++L+L+IY + SL +AL QF E L
Sbjct: 559 ETTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDLD 618
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFM 150
+N+Y+C +C A K+ SI + P + ++LKRF KI+ + P L+ FM
Sbjct: 619 GENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQEGRYGKINKCISFPEMLDMIPFM 678
Query: 151 HCRRN------LVSAVIHHGS--SSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN- 201
+ L + ++H + +SFSGHY G+++ D + + QV +
Sbjct: 679 TRTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHRVPMTQVMSE 738
Query: 202 -AYVVIY 207
AY++ Y
Sbjct: 739 GAYMLFY 745
>gi|330801622|ref|XP_003288824.1| hypothetical protein DICPUDRAFT_34644 [Dictyostelium purpureum]
gi|325081115|gb|EGC34643.1| hypothetical protein DICPUDRAFT_34644 [Dictyostelium purpureum]
Length = 3068
Score = 64.3 bits (155), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 45/153 (29%), Positives = 69/153 (45%), Gaps = 27/153 (17%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L LS+D+ SL E+L F +E LV DN Y+CE C + +A K+ I++ P IL L
Sbjct: 2238 LSLSMDVKNKRSLAESLASFIDEELLVGDNKYKCESCDGRVDAIKRTLIDRCPNTLILQL 2297
Query: 125 KRF-----NYLCLKISCAVQVPLYLEFGKFM---------------------HCRRNLVS 158
KRF N +K++ + P+ L+ F + L
Sbjct: 2298 KRFEFDLDNMRNIKLNDFYEFPMLLDIEPFTVESVERKEKSNILMMSSMDPNEYKYTLSG 2357
Query: 159 AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV 191
V+H G++ SGHY + ++GS+ D V
Sbjct: 2358 IVLHQGTAD-SGHYISLIKDTNGSWFELNDTLV 2389
>gi|321457258|gb|EFX68348.1| hypothetical protein DAPPUDRAFT_63211 [Daphnia pulex]
Length = 1069
Score = 63.9 bits (154), Expect = 5e-08, Method: Composition-based stats.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 14/142 (9%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LSL +LDE L +F +E L + Y CE C K AT+ + P + + L
Sbjct: 238 LDLSLGSKSDVTLDECLAEFLHEEKLEGTDQYFCENCSSKQNATRSIRLRHLPAMLNIQL 297
Query: 125 KRFNY-----LCLKISCAVQVPLYLEFGKFMHCR--------RNLVSAVIHHGSSSFSGH 171
RF + L K+S V P +E ++ + +L + +IH G S++SGH
Sbjct: 298 LRFVFDRKTGLKKKVSSMVHFPFVVEMSNYVKTQGEEPSSLTYDLSAVLIHRGPSAYSGH 357
Query: 172 YNC-IGSTSSGSYHYFGDDRVQ 192
Y I +G+++ F D+ VQ
Sbjct: 358 YIAHIKDPVTGTWYKFNDEVVQ 379
>gi|255080844|ref|XP_002503995.1| predicted protein [Micromonas sp. RCC299]
gi|226519262|gb|ACO65253.1| predicted protein [Micromonas sp. RCC299]
Length = 2921
Score = 63.9 bits (154), Expect = 5e-08, Method: Composition-based stats.
Identities = 59/223 (26%), Positives = 87/223 (39%), Gaps = 52/223 (23%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQ--FSIEKPPIVFIL 122
+ +S+D+ L E+L + E L DN + CE+CG K +A K+ FS EK P ++
Sbjct: 2017 VHVSVDVRNKRDLVESLASYVQGELLESDNQWFCEQCGKKVDAVKRACFSGEKLPNTLLV 2076
Query: 123 LLKRFNY-----LCLKISCAVQVPLYLEFGKFM--------------------------H 151
LKRF + LKI + P+ L+ F H
Sbjct: 2077 HLKRFEFDYETMQRLKIKSRFEFPMELDMSPFTVEGIERDASAESDPTAPVPELPLGPDH 2136
Query: 152 CRRNLVSAVIHHGSSSFSGHY-------------NCIGSTSSGSYHYFGDDRVQ---ASN 195
R LV V+H G ++F+GHY N +H + D RV+ +N
Sbjct: 2137 YRYRLVGVVVHSG-TAFAGHYYSYIRERGAPPGANAAEHGVGARWHVYDDQRVEPYDVAN 2195
Query: 196 LQQVT--NAYVVIYELLPSSLHHLNSSLHSSSPGSVEPRTHHR 236
L+ T Y V S H ++ LH + PR R
Sbjct: 2196 LEADTFGGKYTVNMSQFTGSDHDVSGDLHGPAHHHHVPRQSGR 2238
>gi|379030631|ref|NP_001243800.1| ubiquitin carboxyl-terminal hydrolase 17-like protein 3 [Homo
sapiens]
gi|187653918|sp|A6NCW0.1|U17L3_HUMAN RecName: Full=Ubiquitin carboxyl-terminal hydrolase 17-like protein
3; AltName: Full=Deubiquitinating enzyme 17-like protein
3; AltName: Full=Ubiquitin thioesterase 17-like protein
3; AltName: Full=Ubiquitin-specific-processing protease
17-like protein 3
Length = 530
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 59/234 (25%), Positives = 96/234 (41%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED HEFL++ ++
Sbjct: 139 PGHVIQPSQALASGFHRGKQEDVHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+ ++ V IL+LKRF+ + K++ VQ P L+ +M +
Sbjct: 259 QRAPASNTLTLHTSAKVLILVLKRFSDVAGNKLAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S GHY G ++ D V ++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHDGHYFSYVKAQEGQWYKMDDAEVTVCSITSVLSQQAYVLFY 372
>gi|317025538|ref|XP_001389270.2| ubiquitin carboxyl-terminal hydrolase creB [Aspergillus niger CBS
513.88]
gi|300681004|sp|A2Q9N1.2|CREB_ASPNC RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase creB;
AltName: Full=Carbon catabolite repression protein B;
AltName: Full=Deubiquitinating enzyme creB; AltName:
Full=Ubiquitin thioesterase creB; AltName:
Full=Ubiquitin-hydrolyzing enzyme creB; AltName:
Full=Ubiquitin-specific-processing protease creB
Length = 758
Score = 63.9 bits (154), Expect = 5e-08, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P + L L
Sbjct: 302 LDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 361
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 362 KRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 421
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 422 SIIKTQDRGWLLFDDEMVEPVDKNYVRNFFGDKPGLACAYVLFYQ 466
>gi|425768622|gb|EKV07140.1| Ubiquitin carboxyl-terminal hydrolase [Penicillium digitatum PHI26]
gi|425776047|gb|EKV14285.1| Ubiquitin carboxyl-terminal hydrolase [Penicillium digitatum Pd1]
Length = 793
Score = 63.9 bits (154), Expect = 5e-08, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P V L L
Sbjct: 326 LDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRVLALHL 385
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 386 KRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 445
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 446 AIIKTEDRGWLLFDDELVEPVDKSYVRNFFGDRPGLACAYVLFYQ 490
>gi|21450103|ref|NP_659186.1| ubiquitin carboxyl-terminal hydrolase 3 [Mus musculus]
gi|30580632|sp|Q91W36.1|UBP3_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 3; AltName:
Full=Deubiquitinating enzyme 3; AltName: Full=Ubiquitin
thioesterase 3; AltName:
Full=Ubiquitin-specific-processing protease 3
gi|16877850|gb|AAH17156.1| Ubiquitin specific peptidase 3 [Mus musculus]
gi|26327065|dbj|BAC27276.1| unnamed protein product [Mus musculus]
gi|148694176|gb|EDL26123.1| ubiquitin specific peptidase 3 [Mus musculus]
Length = 520
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/288 (27%), Positives = 116/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 222 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 281
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 282 GVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 341
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 342 LDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 401
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPLY-LEFGKFM---------HCRRNLVSAVI 161
K P L LKRF+ YL K+ VQ PL L+ ++ C +L + V+
Sbjct: 402 KLPKALCLHLKRFHWTAYLRNKVDTYVQFPLRGLDMKCYLLEPENSGPDSCLYDLAAVVV 461
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY + G + +F D V ++ + V AY++ Y
Sbjct: 462 HHGSGVGSGHYTAY-AVHEGRWFHFNDSTVTVTDEETVGKAKAYILFY 508
>gi|357113662|ref|XP_003558620.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like
[Brachypodium distachyon]
Length = 366
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 80/169 (47%), Gaps = 29/169 (17%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LSLDI Q SS+ L F + E L ++ + C+KC EA K+ I+KPP + ++ L
Sbjct: 196 LDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPNILVIHL 255
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L K ++ N L + ++H GS GHY
Sbjct: 256 KRFKYIEQLGRYKKLSYRVVFPLEL---KLINTVDNSDLEYSLFAVLVHVGSGPNHGHYI 312
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQV--------------TNAYVVIYE 208
+ S + +F D+ V+ ++ V N Y++ YE
Sbjct: 313 SL-VKSHNHWLFFDDENVEMTDESMVQTFFGSAQEFSGNTDNGYILFYE 360
>gi|74179937|dbj|BAE36525.1| unnamed protein product [Mus musculus]
Length = 482
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 116/287 (40%), Gaps = 82/287 (28%)
Query: 2 RKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE-----------G 50
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++ G
Sbjct: 185 RKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNG 244
Query: 51 IHRSYL----KVISGSNN-------------------------------------LELSL 69
+ RS + +S SN L+LSL
Sbjct: 245 VSRSAILQEKSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSL 304
Query: 70 DIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
DI + SL + L F E L LY C KC K ++TK+F I+K
Sbjct: 305 DIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQK 364
Query: 116 PPIVFILLLKRFN---YLCLKISCAVQVPLY-LEFGKFM---------HCRRNLVSAVIH 162
P L LKRF+ YL K+ VQ PL L+ ++ C +L + V+H
Sbjct: 365 LPKALCLHLKRFHWTAYLRNKVDTYVQFPLRGLDMKCYLLEPENSGPDSCLYDLAAVVVH 424
Query: 163 HGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HGS SGHY + G + +F D V ++ + V AY++ Y
Sbjct: 425 HGSGVGSGHYTAY-AVHEGRWFHFNDSTVTVTDEETVGKAKAYILFY 470
>gi|395822293|ref|XP_003784455.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 2
[Otolemur garnettii]
Length = 476
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 82/288 (28%), Positives = 117/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH-------- 52
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++ +H
Sbjct: 178 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQDGFN 237
Query: 53 ---------------RSYLKVISGSNN-----------------------------LELS 68
S I+GS+ L+LS
Sbjct: 238 GVSHSAILQENSTLSTSNKCCINGSSTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 297
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 298 LDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 357
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E +C +L + V+
Sbjct: 358 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPENCLYDLAAVVV 417
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 418 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 464
>gi|449438831|ref|XP_004137191.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cucumis
sativus]
gi|449524412|ref|XP_004169217.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Cucumis
sativus]
Length = 369
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 46/136 (33%), Positives = 69/136 (50%), Gaps = 9/136 (6%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LSLDI Q SS+ L F + E L ++ + C+KC EA K+ I+KPP + ++ L
Sbjct: 197 LDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHL 256
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMH---CRRNLVSAVIHHGSSSFSGHYNCIG 176
KRF Y+ K+ V PL L+ M +L + V+H GS GHY +
Sbjct: 257 KRFKYIEQLGRYKKLLYRVVFPLELKLSNTMEDADSEYSLFAVVVHVGSGPNHGHYVSL- 315
Query: 177 STSSGSYHYFGDDRVQ 192
S + +F D+ V+
Sbjct: 316 VKSHNHWLFFDDENVE 331
>gi|380491290|emb|CCF35426.1| ubiquitin carboxyl-terminal hydrolase, partial [Colletotrichum
higginsianum]
Length = 737
Score = 63.9 bits (154), Expect = 5e-08, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + SS+ L +F A+E L N + C+ CG EA K+ I++ P V L L
Sbjct: 313 LDLSIDLEEHSSVTSCLRKFSAEEMLCERNKFHCDHCGGLQEAEKRMKIKRLPKVLALHL 372
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G +++ GHY
Sbjct: 373 KRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTDDAEDPDRLYELYAVVVHIGGNAYHGHYV 432
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
+ T + F D+ V+ + V N AYV+ Y+
Sbjct: 433 SVIKTKDRGWVLFDDEMVEPVDKHFVRNFFGDKPGMACAYVLFYQ 477
>gi|379045587|gb|AFC87622.1| putative ubiquitin carboxyl-terminal hydrolase CreB [Penicillium
decumbens]
Length = 769
Score = 63.9 bits (154), Expect = 5e-08, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P V L L
Sbjct: 308 LDLSVDLEQHSSVTACLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRVLALHL 367
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 368 KRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 427
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 428 AIIKTEDRGWLLFDDELVEPVDKNYVRNFFGDKPGLACAYVLFYQ 472
>gi|449472093|ref|XP_002191422.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Taeniopygia
guttata]
Length = 640
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 117/287 (40%), Gaps = 82/287 (28%)
Query: 2 RKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE-----------G 50
RKTL A + +A PE + + I +F Y+ +D+HEF+ YL++ G
Sbjct: 343 RKTLCALWQGNQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNG 402
Query: 51 IHRSYL----KVISGSNN-------------------------------------LELSL 69
+ RS + +S SN L+LSL
Sbjct: 403 VSRSVILQENSSLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSL 462
Query: 70 DIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
DI + +L + L F E L LY C KC K ++TK+F I+K
Sbjct: 463 DIPSQFRNKRTKNQESGPMCTLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQK 522
Query: 116 PPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVIH 162
P V L LKRF+ YL K+ V+ PL YL E C +LV+ V+H
Sbjct: 523 LPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLVAVVVH 582
Query: 163 HGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HGS SGHY + G + +F D V ++ + V AY++ Y
Sbjct: 583 HGSGVGSGHYTAYAA-HEGRWFHFNDSTVTLTDEETVGKAKAYILFY 628
>gi|389624701|ref|XP_003710004.1| ubiquitin carboxyl-terminal hydrolase 13 [Magnaporthe oryzae 70-15]
gi|351649533|gb|EHA57392.1| ubiquitin carboxyl-terminal hydrolase 13 [Magnaporthe oryzae 70-15]
Length = 766
Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + SS+ L +F A+E L N + C+ CG EA K+ I++ P V L L
Sbjct: 327 LDLSIDLDEHSSVTSCLRKFSAEEMLCERNKFHCDHCGGLQEAEKRMKIKRLPKVLALHL 386
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G +++ GHY
Sbjct: 387 KRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTPDAEDPDRVYELYAVVVHIGGNAYHGHYV 446
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
+ T+ + F D+ V+ + V N AYV+ Y+
Sbjct: 447 SVIKTADRGWLLFDDEMVEPVDKHFVRNFFGDRPGMACAYVLFYQ 491
>gi|18394440|ref|NP_564014.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
gi|166201354|sp|Q9FPS9.2|UBP15_ARATH RecName: Full=Ubiquitin carboxyl-terminal hydrolase 15; AltName:
Full=Deubiquitinating enzyme 15; Short=AtUBP15; AltName:
Full=Ubiquitin thioesterase 15; AltName:
Full=Ubiquitin-specific-processing protease 15
gi|332191421|gb|AEE29542.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
Length = 924
Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats.
Identities = 72/292 (24%), Positives = 118/292 (40%), Gaps = 65/292 (22%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS-------- 62
ESG + I++ ++ I ED+HEFL L+ + L+ + G
Sbjct: 495 ESGGPLSASRILSHMRSINCQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQ 554
Query: 63 ------------------------------NNLELSLDIYQ-LSSLDEALGQFFAKEYLV 91
N ++L+L+IY + SL +AL QF E L
Sbjct: 555 ETTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDLD 614
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFM 150
+N+Y+C +C A K+ SI + P + ++LKRF KI+ + P L+ FM
Sbjct: 615 GENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQEGRYGKINKCISFPEMLDMIPFM 674
Query: 151 HCRRN-----LVSAVIHH---GSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN- 201
+ ++ AVI H ++SFSGHY G+++ D + + QV +
Sbjct: 675 TRTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMSE 734
Query: 202 -AYVVIY-ELLPSSL---HHLNSSLHSSSP-----------GSVEPRTHHRN 237
AY++ Y P H+ + +H S P +PR H+N
Sbjct: 735 GAYMLFYMRSYPRPQRGEHNGKAPVHHSQPRNEMKEQRKPVNRFKPRADHKN 786
>gi|405117812|gb|AFR92587.1| ubiquitin C-terminal hydrolase Ubp16 [Cryptococcus neoformans var.
grubii H99]
Length = 624
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/209 (29%), Positives = 84/209 (40%), Gaps = 29/209 (13%)
Query: 28 IAHHFEYYRPED-SHEFLLYLIEGIHRSYLKVISGSNN--------LELSLDIYQLS--S 76
AH PE H +Y I G V S NN L+LSLD+ + S
Sbjct: 230 FAHKTSRDIPEKIKHTSWVYRIWGGRVRSRVVCSRCNNPSDTFDSFLDLSLDVNKQGKKS 289
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF--NY----- 129
+ L F ++ L DN Y CE+C K ATK F I++ P + L LKRF NY
Sbjct: 290 VLGMLAGFTKEDKLEGDNKYHCERCKRKANATKSFKIDQAPPILTLHLKRFSVNYNHYSG 349
Query: 130 --LCLKISCAVQVPLYLEFGKFM------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSG 181
K + ++ L+ +M + L H G+ GHY SG
Sbjct: 350 RARAEKFNQPIKFEQTLDIAPYMVNPGSSGTKYRLFGVTCHRGTELRFGHYTSYVRGPSG 409
Query: 182 SYHYFGDDRVQASNLQQVTN---AYVVIY 207
+ + DD V L QV N AY++ Y
Sbjct: 410 QWFHADDDDVSPVQLVQVLNDKTAYLLSY 438
>gi|334182643|ref|NP_001185019.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
gi|332191422|gb|AEE29543.1| ubiquitin carboxyl-terminal hydrolase 15 [Arabidopsis thaliana]
Length = 928
Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats.
Identities = 72/292 (24%), Positives = 118/292 (40%), Gaps = 65/292 (22%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS-------- 62
ESG + I++ ++ I ED+HEFL L+ + L+ + G
Sbjct: 499 ESGGPLSASRILSHMRSINCQIGDGSQEDAHEFLRLLVASMQSICLERLGGETKVDPRLQ 558
Query: 63 ------------------------------NNLELSLDIYQ-LSSLDEALGQFFAKEYLV 91
N ++L+L+IY + SL +AL QF E L
Sbjct: 559 ETTLVQHMFGGRLRSKVKCLRCDHESERYENIMDLTLEIYGWVESLQDALTQFTRPEDLD 618
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFM 150
+N+Y+C +C A K+ SI + P + ++LKRF KI+ + P L+ FM
Sbjct: 619 GENMYRCSRCAGYVRARKELSIHEAPNILTIVLKRFQEGRYGKINKCISFPEMLDMIPFM 678
Query: 151 HCRRN-----LVSAVIHH---GSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN- 201
+ ++ AVI H ++SFSGHY G+++ D + + QV +
Sbjct: 679 TRTGDVPPLYMLYAVIVHLDTLNASFSGHYISYVKDLRGNWYRIDDSEIHPVPMTQVMSE 738
Query: 202 -AYVVIY-ELLPSSL---HHLNSSLHSSSP-----------GSVEPRTHHRN 237
AY++ Y P H+ + +H S P +PR H+N
Sbjct: 739 GAYMLFYMRSYPRPQRGEHNGKAPVHHSQPRNEMKEQRKPVNRFKPRADHKN 790
>gi|194910722|ref|XP_001982216.1| GG11165 [Drosophila erecta]
gi|190656854|gb|EDV54086.1| GG11165 [Drosophila erecta]
Length = 364
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 106/274 (38%), Gaps = 68/274 (24%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLY-------------------- 46
A Q + +I P+ I +L+ F+ Y +D+HEFL +
Sbjct: 78 ATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNAGPSNG 137
Query: 47 -----------------------------LIEGIHRSYLKVIS-------GSNNLELSLD 70
+ +GI S + ++ N +L +D
Sbjct: 138 NPKSSSQGGSTRNGTGTNGANSEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVD 197
Query: 71 IYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL 130
+ Q +S+ L F E L DN ++C+ C EA K+ ++K P++ L LKRF Y+
Sbjct: 198 VDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYM 257
Query: 131 C-----LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTS 179
+K+S V PL L ++ R +L + VIH GS GHY I S
Sbjct: 258 EQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISI-VKS 316
Query: 180 SGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
G + F DD V + + Y + ++ SS
Sbjct: 317 HGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSS 350
>gi|432901665|ref|XP_004076886.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Oryzias
latipes]
Length = 401
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 82/164 (50%), Gaps = 17/164 (10%)
Query: 66 ELSLDIYQLS----SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFI 121
+LS+ I Q +L + L F ++ L + C KC + + TK+FSI+K P + +
Sbjct: 230 DLSIPIAQERPGEVTLKDCLRLFTKEDVLDGEEKPTCNKCKARRKCTKRFSIQKFPQILV 289
Query: 122 LLLKRF---NYLCLKISCAVQVPLY-LEFGKFM-----HCRRNLVSAVIHHGSSSFSGHY 172
+ LKRF N K+S V PL L+ +F H NL AV +H ++ GHY
Sbjct: 290 IHLKRFSDSNSRSSKLSTFVNFPLKELDLREFSADNSEHPVYNLY-AVSNHTGNTLGGHY 348
Query: 173 NCIGSTSS-GSYHYFGDDRVQASNLQQV--TNAYVVIYELLPSS 213
+ G ++ + D RV + QV +NAYV+ YEL PSS
Sbjct: 349 TAYCRNPALGEWYSYNDSRVSPISSGQVRTSNAYVLFYELAPSS 392
>gi|412989987|emb|CCO20629.1| predicted protein [Bathycoccus prasinos]
Length = 706
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 62/241 (25%), Positives = 100/241 (41%), Gaps = 56/241 (23%)
Query: 23 NKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN-------LELSLDIYQLS 75
N KL A+ + E F+ + G RS + S +++SL+ ++
Sbjct: 206 NGKKLTANAIDPESKEAETTFIWRVFGGQLRSCVTCQSCGRESAKLDPCMDMSLECAKVK 265
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL--- 132
SL++AL F E L DN Y+CE C + A KQFS++K P V + LKRF ++
Sbjct: 266 SLEQALKLFTRVEVLDGDNKYRCEGCKKLSRAKKQFSVDKAPNVLQIQLKRFEFVPFGRG 325
Query: 133 KISCAVQVPLYLEFGKFMHC-------RR------------------------------- 154
K+S ++ PL L+ ++ RR
Sbjct: 326 KLSQFIEYPLVLDLTSYLTSILKINGGRRGKKRSKSANNAVLDDIMGGSSTEKAFSSSSS 385
Query: 155 --NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVT----NAYVVIYE 208
+L+ ++H GSS SGHY +G + D+ V +N+ + T AY++ Y
Sbjct: 386 VYDLIGVLVHAGSSMNSGHYYSYVKAQNGFWFEMDDESV--TNVSEKTVLRQKAYLLFYS 443
Query: 209 L 209
L
Sbjct: 444 L 444
>gi|403182891|gb|EJY57700.1| AAEL017004-PA [Aedes aegypti]
Length = 666
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 63 NNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFIL 122
N +L +D+ Q +S+ L F E L DN ++C+ C EA K+ ++K P++ L
Sbjct: 492 NFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILAL 551
Query: 123 LLKRFNYLC-----LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGH 171
LKRF Y+ +K+S V PL L ++ R +L++ VIH GS GH
Sbjct: 552 HLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLMAVVIHCGSGPNRGH 611
Query: 172 YNCIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
Y I S G + F DD V + + Y + ++ SS
Sbjct: 612 YISI-VKSHGFWLLFDDDMVDKIEASTIEDFYGLTSDIQKSS 652
>gi|195573010|ref|XP_002104488.1| GD20983 [Drosophila simulans]
gi|194200415|gb|EDX13991.1| GD20983 [Drosophila simulans]
Length = 364
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 106/274 (38%), Gaps = 68/274 (24%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLY-------------------- 46
A Q + +I P+ I +L+ F+ Y +D+HEFL +
Sbjct: 78 ATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNAGPSNG 137
Query: 47 -----------------------------LIEGIHRSYLKVIS-------GSNNLELSLD 70
+ +GI S + ++ N +L +D
Sbjct: 138 NPKATNQGGSTRNGTGTNGANSEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVD 197
Query: 71 IYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL 130
+ Q +S+ L F E L DN ++C+ C EA K+ ++K P++ L LKRF Y+
Sbjct: 198 VDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYM 257
Query: 131 C-----LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTS 179
+K+S V PL L ++ R +L + VIH GS GHY I S
Sbjct: 258 EQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISI-VKS 316
Query: 180 SGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
G + F DD V + + Y + ++ SS
Sbjct: 317 HGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSS 350
>gi|361131981|gb|EHL03596.1| putative ubiquitin carboxyl-terminal hydrolase creB [Glarea
lozoyensis 74030]
Length = 685
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + SS+ L +F A+E L N + C+ CG EA K+ I+K P + L L
Sbjct: 264 LDLSIDLEEHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKKLPKILTLHL 323
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H GS+++ GHY
Sbjct: 324 KRFKYTEDMTRLQKLFHRVVYPYHLRMFNTTDDAEDPDRLYELYAIVVHIGSNAYHGHYV 383
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
+ T + F D+ V+ + V N AYV+ Y+
Sbjct: 384 SVIKTQDRGWLLFDDEMVEPVDKHYVKNFFGDKPGQACAYVLFYQ 428
>gi|384497193|gb|EIE87684.1| hypothetical protein RO3G_12395 [Rhizopus delemar RA 99-880]
Length = 551
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 80/175 (45%), Gaps = 22/175 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
++LS+D+ SS+ L QF A E L N Y C+ C EA K+ I+K P + L L
Sbjct: 297 MDLSIDVEMNSSITSCLRQFSASETLCHKNKYYCDICSGLQEAEKRMKIKKLPNILALHL 356
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y +K++ V P L + L S VIH GS GHY
Sbjct: 357 KRFKYQEQLQKYIKLTYRVVFPFELRLFNTSDDTEDADRMYELWSIVIHIGSGPHHGHYV 416
Query: 174 CIGSTSSGSYHYFGDD---RVQASNLQQ-------VTNAYVVIYELLPSSLHHLN 218
I S+G + F DD ++Q ++Q+ + YV+ Y+ + ++ +N
Sbjct: 417 AI-VKSNGQWMLFDDDVVTQIQEEDIQKYFSDLPGSGSGYVLFYQAIDLDMNTIN 470
>gi|328698286|ref|XP_001952840.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 46-like
[Acyrthosiphon pisum]
Length = 385
Score = 63.9 bits (154), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 75/160 (46%), Gaps = 12/160 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
+L +DI Q +S+ L F E L DN ++C+ C EA K ++K P++ L L
Sbjct: 197 FDLQVDIDQNTSITHCLRCFSNTEMLCSDNKFKCDNCCSYQEAQKCMRVKKLPMILALHL 256
Query: 125 KRFNYLC-----LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYN 173
KRF Y+ +K+S V PL L ++ R NLV+ VIH GS GHY
Sbjct: 257 KRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRMYNLVAVVIHCGSGPNRGHYI 316
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
I S + F DD V + + + Y + +L SS
Sbjct: 317 SI-VKSHDFWLLFDDDMVDKIDQSAIEDFYGLTSDLQKSS 355
>gi|226289925|gb|EEH45409.1| ubiquitin carboxyl-terminal hydrolase [Paracoccidioides
brasiliensis Pb18]
Length = 832
Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F +E L N + C+ CG EA K+ I++ P + L L
Sbjct: 318 LDLSVDLDQHSSVTSCLRKFSEEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 377
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P YL + L + V+H G + GHY
Sbjct: 378 KRFKYTEDLQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 437
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 438 AIIKTEDMGWLLFDDEMVEPVDKNYVRNFFGDRPGLACAYVLFYQ 482
>gi|440467462|gb|ELQ36685.1| ubiquitin carboxyl-terminal hydrolase 13 [Magnaporthe oryzae Y34]
Length = 779
Score = 63.9 bits (154), Expect = 6e-08, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + SS+ L +F A+E L N + C+ CG EA K+ I++ P V L L
Sbjct: 340 LDLSIDLDEHSSVTSCLRKFSAEEMLCERNKFHCDHCGGLQEAEKRMKIKRLPKVLALHL 399
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G +++ GHY
Sbjct: 400 KRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTPDAEDPDRVYELYAVVVHIGGNAYHGHYV 459
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
+ T+ + F D+ V+ + V N AYV+ Y+
Sbjct: 460 SVIKTADRGWLLFDDEMVEPVDKHFVRNFFGDRPGMACAYVLFYQ 504
>gi|195502725|ref|XP_002098352.1| GE10332 [Drosophila yakuba]
gi|194184453|gb|EDW98064.1| GE10332 [Drosophila yakuba]
Length = 364
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 66/274 (24%), Positives = 106/274 (38%), Gaps = 68/274 (24%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLY-------------------- 46
A Q + +I P+ I +L+ F+ Y +D+HEFL +
Sbjct: 78 ATQKKKVGSIAPKKFITRLRKEKEEFDNYMQQDAHEFLNFLINHINEIILAERNAGPSNG 137
Query: 47 -----------------------------LIEGIHRSYLKVIS-------GSNNLELSLD 70
+ +GI S + ++ N +L +D
Sbjct: 138 NPKASNQGGSTRNGTGSNGANSEPTWVHEIFQGILTSETRCLNCETVSSKDENFFDLQVD 197
Query: 71 IYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL 130
+ Q +S+ L F E L DN ++C+ C EA K+ ++K P++ L LKRF Y+
Sbjct: 198 VDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILALHLKRFKYM 257
Query: 131 C-----LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTS 179
+K+S V PL L ++ R +L + VIH GS GHY I S
Sbjct: 258 EQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGHYISI-VKS 316
Query: 180 SGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
G + F DD V + + Y + ++ SS
Sbjct: 317 HGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSS 350
>gi|449266379|gb|EMC77432.1| Ubiquitin carboxyl-terminal hydrolase 3, partial [Columba livia]
Length = 490
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 81/287 (28%), Positives = 116/287 (40%), Gaps = 82/287 (28%)
Query: 2 RKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE-----------G 50
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++ G
Sbjct: 193 RKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNG 252
Query: 51 IHRSYL----KVISGSNN-------------------------------------LELSL 69
+ RS + +S SN L+LSL
Sbjct: 253 VSRSVILQENATLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSL 312
Query: 70 DIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
DI + +L + L F E L LY C KC K ++TK+F I+K
Sbjct: 313 DIPSQFRNKRTKNQENGPMCTLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQK 372
Query: 116 PPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVIH 162
P V L LKRF+ YL K+ V+ PL YL E C +L + V+H
Sbjct: 373 LPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVH 432
Query: 163 HGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HGS SGHY + G + +F D V ++ + V AY++ Y
Sbjct: 433 HGSGVGSGHYTAYAA-HEGRWFHFNDSTVTLTDEETVVKAKAYILFY 478
>gi|170031964|ref|XP_001843853.1| conserved hypothetical protein [Culex quinquefasciatus]
gi|167871433|gb|EDS34816.1| conserved hypothetical protein [Culex quinquefasciatus]
Length = 380
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 63 NNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFIL 122
N +L +D+ Q +S+ L F E L DN ++C+ C EA K+ ++K P++ L
Sbjct: 206 NFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILAL 265
Query: 123 LLKRFNYLC-----LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGH 171
LKRF Y+ +K+S V PL L ++ R +L++ VIH GS GH
Sbjct: 266 HLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLMAVVIHCGSGPNRGH 325
Query: 172 YNCIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
Y I S G + F DD V + + Y + ++ SS
Sbjct: 326 YISI-VKSHGFWLLFDDDMVDKIEASTIEDFYGLTSDIQKSS 366
>gi|152112339|sp|A2XDG4.1|UBP26_ORYSI RecName: Full=Ubiquitin carboxyl-terminal hydrolase 26; AltName:
Full=Deubiquitinating enzyme 26; AltName: Full=Ubiquitin
thioesterase 26; AltName:
Full=Ubiquitin-specific-processing protease 26
gi|125542735|gb|EAY88874.1| hypothetical protein OsI_10351 [Oryza sativa Indica Group]
Length = 1079
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 11/137 (8%)
Query: 66 ELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLK 125
EL L+I L++L+++L + + E L +N Y CE C + +AT+ + P V LK
Sbjct: 244 ELELNIKGLNNLEQSLDDYLSTEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLK 303
Query: 126 RFNYLC-----LKISCAVQVPLYLEFGKFMHCRRN-----LVSAVIHHGSSSFSGHYNC- 174
R+ +L KIS A P L+ GK + + L + +IH GS++ SGHY
Sbjct: 304 RYVFLPKTTTKKKISSAFSFPGQLDMGKRLSNPSSSYTYGLSAILIHKGSAANSGHYVAH 363
Query: 175 IGSTSSGSYHYFGDDRV 191
+ S+G + F D+ V
Sbjct: 364 VKDESNGQWWEFDDEHV 380
>gi|152112340|sp|A3AF13.2|UBP26_ORYSJ RecName: Full=Ubiquitin carboxyl-terminal hydrolase 26; AltName:
Full=Deubiquitinating enzyme 26; AltName: Full=Ubiquitin
thioesterase 26; AltName:
Full=Ubiquitin-specific-processing protease 26
gi|222624351|gb|EEE58483.1| hypothetical protein OsJ_09742 [Oryza sativa Japonica Group]
Length = 1079
Score = 63.5 bits (153), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 70/137 (51%), Gaps = 11/137 (8%)
Query: 66 ELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLK 125
EL L+I L++L+++L + + E L +N Y CE C + +AT+ + P V LK
Sbjct: 244 ELELNIKGLNNLEQSLDDYLSTEALDGENQYFCESCQKRVDATRCIKLRSLPPVVNFQLK 303
Query: 126 RFNYLC-----LKISCAVQVPLYLEFGKFMHCRRN-----LVSAVIHHGSSSFSGHYNC- 174
R+ +L KIS A P L+ GK + + L + +IH GS++ SGHY
Sbjct: 304 RYVFLPKTTTKKKISSAFSFPGQLDMGKRLSNPSSSYTYGLSAILIHKGSAANSGHYVAH 363
Query: 175 IGSTSSGSYHYFGDDRV 191
+ S+G + F D+ V
Sbjct: 364 VKDESNGQWWEFDDEHV 380
>gi|146323881|ref|XP_751541.2| ubiquitin C-terminal hydrolase CreB [Aspergillus fumigatus Af293]
gi|129557489|gb|EAL89503.2| ubiquitin C-terminal hydrolase CreB [Aspergillus fumigatus Af293]
Length = 775
Score = 63.5 bits (153), Expect = 6e-08, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P + L L
Sbjct: 302 LDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 361
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 362 KRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 421
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 422 AIIKTEDRGWLLFDDEMVEPVDKNYVKNFFGDKPGLACAYVLFYQ 466
>gi|67526259|ref|XP_661191.1| hypothetical protein AN3587.2 [Aspergillus nidulans FGSC A4]
gi|74630656|sp|Q96V54.1|CREB_EMENI RecName: Full=Ubiquitin carboxyl-terminal hydrolase creB; AltName:
Full=Carbon catabolite repression protein B; AltName:
Full=Deubiquitinating enzyme creB; AltName:
Full=Ubiquitin thioesterase creB; AltName:
Full=Ubiquitin-hydrolyzing enzyme creB; AltName:
Full=Ubiquitin-specific-processing protease creB
gi|15637187|gb|AAL04454.1| CREB [Emericella nidulans]
gi|40740605|gb|EAA59795.1| hypothetical protein AN3587.2 [Aspergillus nidulans FGSC A4]
gi|259481888|tpe|CBF75829.1| TPA: Ubiquitin carboxyl-terminal hydrolase (EC 3.1.2.15)
[Source:UniProtKB/TrEMBL;Acc:Q96V54] [Aspergillus
nidulans FGSC A4]
Length = 766
Score = 63.5 bits (153), Expect = 6e-08, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P + L L
Sbjct: 300 LDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 359
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 360 KRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 419
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 420 SIIKTQDRGWLLFDDEMVEPVDKNYVRNFFGDKPGLACAYVLFYQ 464
>gi|403216854|emb|CCK71350.1| hypothetical protein KNAG_0G02930 [Kazachstania naganishii CBS
8797]
Length = 459
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 59/237 (24%), Positives = 97/237 (40%), Gaps = 56/237 (23%)
Query: 28 IAHHFEYYRPEDSHEFLLYLIEGIHRSYLK---------VISGSNNL------------- 65
I +F Y +D+HEFL +L+ +H Y + V S S+ L
Sbjct: 217 INQNFAGYSQQDAHEFLQFLLNQLHCDYKRERQVDEDKEVRSSSSQLCHCIVHSSFQGTL 276
Query: 66 ---------------------ELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYK 104
+LSLDI +L + L F +E L D Y C +C
Sbjct: 277 RSSIVCPECQDDSKTMLDPFLDLSLDIKGQRTLYDCLDSFHRREQL-HDFDYHCPRCQTS 335
Query: 105 TEATKQFSIEKPPIVFILLLKRFNYLC----LKISCAVQVPLYLEFGKFMHCRRNL---- 156
+ KQ +IE+ +L LKRF +L +K++ VQ PL+L+ ++
Sbjct: 336 RDPIKQLTIERLAPTLVLQLKRFEHLTSGQNVKLNDPVQFPLHLDMSRYCTGGEPTTSIV 395
Query: 157 --VSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIYEL 209
+S V+ H + GHY + +SG + F D + + + V AY+++Y +
Sbjct: 396 YRLSGVVSHSGTVNEGHYTAVLQLNSGEWFKFNDSMISVVSAEDVLREQAYLLLYTV 452
>gi|406866254|gb|EKD19294.1| ubiquitin carboxyl-terminal hydrolase [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 750
Score = 63.5 bits (153), Expect = 7e-08, Method: Composition-based stats.
Identities = 47/165 (28%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + SS+ L +F A+E L N + C+ CG EA K+ I++ P + L L
Sbjct: 331 LDLSIDLEEHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPKILALHL 390
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G +++ GHY
Sbjct: 391 KRFKYTEDMTRLQKLFHRVVYPYHLRMFNTTDDAEDPDRLYELYAVVVHIGGNAYHGHYV 450
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
+ T + F D+ V+ + V N AYV+ Y+
Sbjct: 451 SVIKTQDRGWLLFDDEMVEPVDKHYVRNFFGDKPGMACAYVLFYQ 495
>gi|255548628|ref|XP_002515370.1| cysteine-type endopeptidase, putative [Ricinus communis]
gi|223545314|gb|EEF46819.1| cysteine-type endopeptidase, putative [Ricinus communis]
Length = 632
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 61/253 (24%), Positives = 108/253 (42%), Gaps = 53/253 (20%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISG---------------- 61
P I+++L I + Y + ED+HEF+ + I+ + L G
Sbjct: 239 PMSILSRLPNIGGNLGYGKQEDAHEFMRFAIDTMQSVCLDEYGGEKAVDPAFQETTLIQH 298
Query: 62 ------------------SNNLELSLDIY-----QLSSLDEALGQFFAKEYLVRDNLYQC 98
SN LE +D+ SL++ L QF +E L +N+Y+C
Sbjct: 299 IFGGHLQSQVICTKCNKISNQLENMMDLTVEIHGDSGSLEDCLEQFTDREQLHGENMYRC 358
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN-- 155
+ C +A K+ +I + P + + LKRF K++ V P L+ + +
Sbjct: 359 DGCNDYVKAWKRLTIRRAPNILTIALKRFQSGRFGKLNKRVAFPESLDLSPYTSEGGDGT 418
Query: 156 ----LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + V+H ++SF GHY C G+++ D +V++ L++V AY+++Y
Sbjct: 419 DVYRLYAVVVHVDMLNASFFGHYICYIKDFCGNWYRVDDCKVRSVELEEVLSQGAYMLLY 478
Query: 208 ELL---PSSLHHL 217
+ PS L +
Sbjct: 479 SRISARPSCLRTV 491
>gi|189203173|ref|XP_001937922.1| ubiquitin carboxyl-terminal hydrolase 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
gi|187985021|gb|EDU50509.1| ubiquitin carboxyl-terminal hydrolase 2 [Pyrenophora
tritici-repentis Pt-1C-BFP]
Length = 705
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 80/190 (42%), Gaps = 28/190 (14%)
Query: 47 LIEGIHRSYLKVISGSNN-------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCE 99
L EG S + ++ N L+LS+D+ Q SS+ L +F +E L N + C+
Sbjct: 240 LFEGTLTSETRCLTCENTSQRDEAFLDLSVDLEQHSSVTSCLRKFSEEEMLCERNKFHCD 299
Query: 100 KCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQVPLYLEFGKFMHCRR 154
CG EA K+ I++ P + L LKRF Y K+ V P YL
Sbjct: 300 NCGGLQEAEKRMKIKRLPKILALHLKRFKYTEDLQRLQKLFHRVVYPFYLRLFNTTDDAE 359
Query: 155 N------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN------- 201
+ L + V+H G + GHY I T + F D+ V+ + V N
Sbjct: 360 DPDRLYELYAVVVHIGGGPYHGHYVSIIKTQDRGWLLFDDEMVEPVDKAYVRNFFGGENV 419
Query: 202 ---AYVVIYE 208
AYV+ Y+
Sbjct: 420 LACAYVLFYQ 429
>gi|367018374|ref|XP_003658472.1| hypothetical protein MYCTH_2055311 [Myceliophthora thermophila ATCC
42464]
gi|347005739|gb|AEO53227.1| hypothetical protein MYCTH_2055311 [Myceliophthora thermophila ATCC
42464]
Length = 899
Score = 63.5 bits (153), Expect = 7e-08, Method: Composition-based stats.
Identities = 49/167 (29%), Positives = 75/167 (44%), Gaps = 25/167 (14%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + SS+ L F A+E L N + C+ CG EA K+ ++K P + L L
Sbjct: 326 LDLSIDLEEHSSVTACLLNFSAEEMLCERNKFHCDHCGGLQEAEKRMKVKKLPKILALHL 385
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHC--------RRNLVSAVIHHGSSSFSGH 171
KRF Y K+ V P +L FM L + V+H G +++ GH
Sbjct: 386 KRFKYTEDYSRLQKLFHRVVYPYHLRM--FMTTDDAEDPDRMYELYAVVVHIGGNAYHGH 443
Query: 172 YNCIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
Y + T + F D+ V+ + V N AYV+ Y+
Sbjct: 444 YVAVIKTKDRGWLLFDDEMVEPVDKHFVRNFFGDKPGMACAYVLFYQ 490
>gi|119499990|ref|XP_001266752.1| ubiquitin C-terminal hydrolase CreB [Neosartorya fischeri NRRL 181]
gi|119414917|gb|EAW24855.1| ubiquitin C-terminal hydrolase CreB [Neosartorya fischeri NRRL 181]
Length = 729
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P + L L
Sbjct: 270 LDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 329
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 330 KRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 389
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 390 AIIKTEDRGWLLFDDEMVEPVDKNYVKNFFGDKPGLACAYVLFYQ 434
>gi|340924161|gb|EGS19064.1| ubiquitin carboxyl-terminal hydrolase-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 926
Score = 63.5 bits (153), Expect = 7e-08, Method: Composition-based stats.
Identities = 47/165 (28%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + SS+ L +F A+E L N + C+ CG EA K+ ++K P + L L
Sbjct: 305 LDLSIDLEEHSSVTSCLQKFSAEEMLCERNKFFCDHCGGLQEAEKRMKVKKLPKILALHL 364
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L ++ L + V+H G +++ GHY
Sbjct: 365 KRFKYTEDYSRLQKLFHRVVYPYHLRLFNTTDDAQDPDRLYELYAVVVHIGGNAYHGHYV 424
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
+ T + F D+ V+ + V N AYV+ Y+
Sbjct: 425 VVIKTKDRGWLLFDDEMVEPVDKHFVRNFFGDKPGMACAYVLFYQ 469
>gi|240281920|gb|EER45423.1| ubiquitin C-terminal hydrolase [Ajellomyces capsulatus H143]
gi|325088054|gb|EGC41364.1| ubiquitin C-terminal hydrolase CreB [Ajellomyces capsulatus H88]
Length = 770
Score = 63.5 bits (153), Expect = 7e-08, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F +E L N + C+ CG EA K+ I++ P + L L
Sbjct: 241 LDLSVDLDQHSSVTSCLRKFSEEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 300
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P YL + L + V+H G + GHY
Sbjct: 301 KRFKYTEDLQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 360
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 361 AIIKTEDRGWLLFDDEMVEPVDKNYVRNFFGDRPGLACAYVLFYQ 405
>gi|83764653|dbj|BAE54797.1| unnamed protein product [Aspergillus oryzae RIB40]
Length = 707
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P + L L
Sbjct: 254 LDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 313
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 314 KRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 373
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 374 AIIKTQDRGWLLFDDEMVEPVDKNYVRNFFGDRPGLACAYVLFYQ 418
>gi|238504084|ref|XP_002383274.1| ubiquitin C-terminal hydrolase CreB [Aspergillus flavus NRRL3357]
gi|317138278|ref|XP_001816799.2| ubiquitin carboxyl-terminal hydrolase creB [Aspergillus oryzae
RIB40]
gi|300680899|sp|B8NSV5.1|CREB_ASPFN RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase creB;
AltName: Full=Carbon catabolite repression protein B;
AltName: Full=Deubiquitinating enzyme creB; AltName:
Full=Ubiquitin thioesterase creB; AltName:
Full=Ubiquitin-hydrolyzing enzyme creB; AltName:
Full=Ubiquitin-specific-processing protease creB
gi|220690745|gb|EED47094.1| ubiquitin C-terminal hydrolase CreB [Aspergillus flavus NRRL3357]
gi|391863176|gb|EIT72488.1| ubiquitin-specific protease [Aspergillus oryzae 3.042]
Length = 755
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P + L L
Sbjct: 302 LDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 361
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 362 KRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 421
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 422 AIIKTQDRGWLLFDDEMVEPVDKNYVRNFFGDRPGLACAYVLFYQ 466
>gi|300681006|sp|Q0CT11.2|CREB_ASPTN RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase creB;
AltName: Full=Carbon catabolite repression protein B;
AltName: Full=Deubiquitinating enzyme creB; AltName:
Full=Ubiquitin thioesterase creB; AltName:
Full=Ubiquitin-hydrolyzing enzyme creB; AltName:
Full=Ubiquitin-specific-processing protease creB
Length = 768
Score = 63.5 bits (153), Expect = 7e-08, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P + L L
Sbjct: 302 LDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 361
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 362 KRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 421
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 422 AIIKTQDRGWLLFDDEMVEPVDKNYVRNFFGDKPGLACAYVLFYQ 466
>gi|300681005|sp|Q2UUG8.2|CREB_ASPOR RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase creB;
AltName: Full=Carbon catabolite repression protein B;
AltName: Full=Deubiquitinating enzyme creB; AltName:
Full=Ubiquitin thioesterase creB; AltName:
Full=Ubiquitin-hydrolyzing enzyme creB; AltName:
Full=Ubiquitin-specific-processing protease creB
Length = 754
Score = 63.5 bits (153), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P + L L
Sbjct: 301 LDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 360
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 361 KRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 420
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 421 AIIKTQDRGWLLFDDEMVEPVDKNYVRNFFGDRPGLACAYVLFYQ 465
>gi|115389692|ref|XP_001212351.1| ubiquitin carboxyl-terminal hydrolase 12 [Aspergillus terreus
NIH2624]
gi|114194747|gb|EAU36447.1| ubiquitin carboxyl-terminal hydrolase 12 [Aspergillus terreus
NIH2624]
Length = 757
Score = 63.5 bits (153), Expect = 7e-08, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P + L L
Sbjct: 291 LDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 350
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 351 KRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 410
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 411 AIIKTQDRGWLLFDDEMVEPVDKNYVRNFFGDKPGLACAYVLFYQ 455
>gi|332018399|gb|EGI58993.1| Ubiquitin carboxyl-terminal hydrolase 2 [Acromyrmex echinatior]
Length = 749
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 101/222 (45%), Gaps = 27/222 (12%)
Query: 17 IPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLELSLD-IYQLS 75
IP+ + K + Y R EDS ++ + G RS L+ S +++ ++LD + LS
Sbjct: 531 IPDSYTDMQKAVESWKRYLRSEDS--TIVDVFVGQLRSSLRCTS-CDHVSVTLDPFWDLS 587
Query: 76 ----------SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLK 125
L + L F +E L D C KC + + TK FSI+K P + ++ LK
Sbjct: 588 LPIPARSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVIHLK 647
Query: 126 RFNYLCL---KISCAVQVPLY-LEFGKFM-----HCRRNLVSAVIHHGSSSFSGHYNC-I 175
RF+ + K++ V PL L+ F C NL V +H +++SGHY
Sbjct: 648 RFSPMERFRGKLNVMVDFPLTGLDLSAFAAPRVPGCTYNLY-GVANHSGTTYSGHYTAYC 706
Query: 176 GSTSSGSYHYFGD--DRVQASNLQQVTNAYVVIYELLPSSLH 215
SG +H + D V +S + AYV+ YE P S H
Sbjct: 707 KHPYSGEWHEYNDSRVSVVSSRSVVSSEAYVLFYEQQPHSSH 748
>gi|312376797|gb|EFR23784.1| hypothetical protein AND_12248 [Anopheles darlingi]
Length = 379
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 63 NNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFIL 122
N +L +D+ Q +S+ L F E L DN ++C+ C EA K+ ++K P++ L
Sbjct: 205 NFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILAL 264
Query: 123 LLKRFNYLC-----LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGH 171
LKRF Y+ +K+S V PL L ++ R +L++ VIH GS GH
Sbjct: 265 HLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLMAVVIHCGSGPNRGH 324
Query: 172 YNCIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
Y I S G + F DD V + + Y + ++ SS
Sbjct: 325 YISI-VKSHGFWLLFDDDMVDKIEASTIEDFYGLTSDIQKSS 365
>gi|395822081|ref|XP_003784352.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Otolemur
garnettii]
Length = 1125
Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCL 132
+L + L FFA++ L DN+Y CEKC K ++K P + + LKRF +
Sbjct: 751 TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFST 810
Query: 133 KISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
KIS V PL L+ F+ +L+S + HHG++S SGHY + +
Sbjct: 811 KISTHVSFPLEGLDLQPFLAKDSPTQIVTYDLLSVICHHGTAS-SGHYIAYCRNNLNNLW 869
Query: 185 YFGDD----RVQASNLQQVTNAYVVIY 207
Y DD +V S +Q AYV+ Y
Sbjct: 870 YEFDDQSVTQVSESTVQN-AEAYVLFY 895
>gi|225682518|gb|EEH20802.1| ubiquitin carboxyl-terminal hydrolase [Paracoccidioides
brasiliensis Pb03]
Length = 765
Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F +E L N + C+ CG EA K+ I++ P + L L
Sbjct: 262 LDLSVDLDQHSSVTSCLRKFSEEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 321
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P YL + L + V+H G + GHY
Sbjct: 322 KRFKYTEDLQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 381
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 382 AIIKTEDMGWLLFDDEMVEPVDKNYVRNFFGDRPGLACAYVLFYQ 426
>gi|225558998|gb|EEH07281.1| ubiquitin C-terminal hydrolase [Ajellomyces capsulatus G186AR]
Length = 770
Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F +E L N + C+ CG EA K+ I++ P + L L
Sbjct: 241 LDLSVDLDQHSSVTSCLRKFSEEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 300
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P YL + L + V+H G + GHY
Sbjct: 301 KRFKYTEDLQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 360
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 361 AIIKTEDMGWLLFDDEMVEPVDKNYVRNFFGDRPGLACAYVLFYQ 405
>gi|224093752|ref|XP_002309976.1| predicted protein [Populus trichocarpa]
gi|222852879|gb|EEE90426.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 69/136 (50%), Gaps = 9/136 (6%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
+LSLDI Q SS+ L F + E L ++ + C+KC EA K+ I+KPP + ++ L
Sbjct: 197 FDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHL 256
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMH---CRRNLVSAVIHHGSSSFSGHYNCIG 176
KRF Y+ K+S V PL L+ + +L + V+H GS GHY +
Sbjct: 257 KRFKYIEQLGRYKKLSYRVVFPLELKLSNTVEDADIEYSLFAVVVHVGSGPNHGHYVSL- 315
Query: 177 STSSGSYHYFGDDRVQ 192
S + +F D+ V+
Sbjct: 316 VKSHNHWLFFDDENVE 331
>gi|344297595|ref|XP_003420482.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Loxodonta
africana]
gi|344297601|ref|XP_003420485.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Loxodonta
africana]
Length = 529
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 100/235 (42%), Gaps = 46/235 (19%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV------------------- 58
P ++ +A ++ ED+HEFL+ ++ + ++ L+
Sbjct: 135 PGDVMEPSHALARGLHRHQQEDAHEFLMSTLDAVQKACLRSHRHLRGLSEDTTLIRRIFG 194
Query: 59 -----------ISGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G ++ L+++LDI S+++AL Q E L +N YQC C
Sbjct: 195 GYWRSRIQCCHCQGVSDTFDPYLDITLDIQAAQSVNQALEQLVTAEELDGENSYQCRICQ 254
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K ++ P +L+LKRF+ L K + V+ P L+ + + R++
Sbjct: 255 RKMPASKTLTLHTCPEALVLVLKRFSDLSGDKNAKQVRYPASLDVSRCLS-RQDGGPAAY 313
Query: 156 -LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G + +GHY +G ++ D V A ++ V AY + Y
Sbjct: 314 RLYAVLVHVGWTCHTGHYLSYVKAGNGKWYRMDDAEVSACDVTCVLSQQAYALFY 368
>gi|365988142|ref|XP_003670902.1| hypothetical protein NDAI_0F03410 [Naumovozyma dairenensis CBS 421]
gi|343769673|emb|CCD25659.1| hypothetical protein NDAI_0F03410 [Naumovozyma dairenensis CBS 421]
Length = 870
Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats.
Identities = 48/162 (29%), Positives = 79/162 (48%), Gaps = 16/162 (9%)
Query: 76 SLDEALGQFFAKEYLV---RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY--- 129
++++A+ FF E L D Y CEKC T A K+ +I + P ++ LK+F +
Sbjct: 670 TIEKAIRDFFNPELLKVDKNDKGYVCEKCNKTTNAIKRSTILRAPETLVVHLKKFRFNGS 729
Query: 130 LCLKISCAVQVPLYLEFGKF-------MHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGS 182
K+ AV P+YL+ ++ + + L+S V+H G S SGHY G+
Sbjct: 730 TSSKMKQAVSYPMYLDITEYCESSKKVLPAKYQLLSVVVHEGRSLSSGHYIAHCRQPDGT 789
Query: 183 YHYFGDDRV-QASNLQQVT--NAYVVIYELLPSSLHHLNSSL 221
+ + D+ + + S L+ +T NAY ++Y L L SL
Sbjct: 790 WATYDDELINKISELKLLTEPNAYYLVYTRLTPRAIPLKDSL 831
>gi|300681001|sp|A1CW53.2|CREB_NEOFI RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase creB;
AltName: Full=Carbon catabolite repression protein B;
AltName: Full=Deubiquitinating enzyme creB; AltName:
Full=Ubiquitin thioesterase creB; AltName:
Full=Ubiquitin-hydrolyzing enzyme creB; AltName:
Full=Ubiquitin-specific-processing protease creB
Length = 761
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P + L L
Sbjct: 302 LDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 361
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 362 KRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 421
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 422 AIIKTEDRGWLLFDDEMVEPVDKNYVKNFFGDKPGLACAYVLFYQ 466
>gi|158300486|ref|XP_320388.3| AGAP012139-PA [Anopheles gambiae str. PEST]
gi|157013182|gb|EAA00200.3| AGAP012139-PA [Anopheles gambiae str. PEST]
Length = 367
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 77/162 (47%), Gaps = 12/162 (7%)
Query: 63 NNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFIL 122
N +L +D+ Q +S+ L F E L DN ++C+ C EA K+ ++K P++ L
Sbjct: 193 NFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILAL 252
Query: 123 LLKRFNYLC-----LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGH 171
LKRF Y+ +K+S V PL L ++ R +L++ VIH GS GH
Sbjct: 253 HLKRFKYMEQYNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLMAVVIHCGSGPNRGH 312
Query: 172 YNCIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
Y I S G + F DD V + + Y + ++ SS
Sbjct: 313 YISI-VKSHGFWLLFDDDMVDKIEASTIEDFYGLTSDIQKSS 353
>gi|397465443|ref|XP_003804505.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Pan paniscus]
Length = 403
Score = 63.5 bits (153), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 95/234 (40%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ +E
Sbjct: 12 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVEAMKKACLPGHKQVDHHSKDTTLIHQIFG 71
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 72 GYWRSQIKCLHCHGISDTFDPYLDITLDIQAAQSVKQALEQLVKPEELNGENAYHCGLCL 131
Query: 103 YKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K ++ IL+L RF N C K++ VQ +M +
Sbjct: 132 QKAPASKTLTLHTSAKFLILVLNRFSNVTCNKLARNVQYRECFYMQPYMSQQSTCPLVYV 191
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ + V AS + V AYV+ Y
Sbjct: 192 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDEADVTASGITSVLSQQAYVLFY 245
>gi|440480427|gb|ELQ61089.1| ubiquitin carboxyl-terminal hydrolase 13 [Magnaporthe oryzae P131]
Length = 821
Score = 63.5 bits (153), Expect = 8e-08, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + SS+ L +F A+E L N + C+ CG EA K+ I++ P V L L
Sbjct: 382 LDLSIDLDEHSSVTSCLRKFSAEEMLCERNKFHCDHCGGLQEAEKRMKIKRLPKVLALHL 441
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G +++ GHY
Sbjct: 442 KRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTPDAEDPDRVYELYAVVVHIGGNAYHGHYV 501
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
+ T+ + F D+ V+ + V N AYV+ Y+
Sbjct: 502 SVIKTADRGWLLFDDEMVEPVDKHFVRNFFGDRPGMACAYVLFYQ 546
>gi|357517045|ref|XP_003628811.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355522833|gb|AET03287.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 737
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 61/250 (24%), Positives = 103/250 (41%), Gaps = 50/250 (20%)
Query: 2 RKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL----- 56
R L S S I+P ++ L + F ED+HEF+ Y + + R +
Sbjct: 261 RDHLDDALERSRSPIVPRELVKNLNYFSAGFVIGNQEDAHEFMQYALNKLKRGFPVGEEN 320
Query: 57 ---KVISG--------------SNNLE----LSLDIYQLSSLDEALGQFFAKEYLVRDNL 95
++ G S+ E +SL+I +S++ +AL F E + D
Sbjct: 321 LIDQIFGGRLVSKLRCCCCGHSSDKFEPLIDMSLEIEHVSTIQQALESFTKVEKM--DGK 378
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQ-VPLYLEFGKFMHCRR 154
+ C C + KQ ++K P V LKRF LK +V+ + Y++F K + +
Sbjct: 379 FICSDCNQEVTMEKQLMLDKAPSVAAFHLKRF----LKDGDSVKKIDKYVDFSKELDLKP 434
Query: 155 ---------------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV 199
L + V H G S SGHY ++ ++ DD+V + + ++V
Sbjct: 435 YTCGSSSGDNVLLKYELYAVVEHRGPSPNSGHYFSFVRSAPDKWYLMDDDKVSSVSEEEV 494
Query: 200 TN--AYVVIY 207
N AY++ Y
Sbjct: 495 LNRKAYILFY 504
>gi|432892779|ref|XP_004075833.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Oryzias
latipes]
Length = 667
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 81/164 (49%), Gaps = 16/164 (9%)
Query: 65 LELSLDIYQLS----SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVF 120
+LSL I + S SL + + F ++ L D C +C + TK+F I+K P +
Sbjct: 503 WDLSLPISKKSYGEVSLMDCMRLFTKEDVLDGDEKPTCYRCKARRRCTKKFRIQKFPKIL 562
Query: 121 ILLLKRFN--YLCLKISCAVQVPL----YLEF--GKFMHCRRNLVSAVIHHGSSSFSGHY 172
+L LKRF+ K+S V PL EF G + NL AV +H ++ GHY
Sbjct: 563 VLHLKRFSEARRTSKLSTFVNFPLKDLDLREFASGNSTNAMYNLY-AVSNHSGTTMGGHY 621
Query: 173 NC-IGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIYELLPSS 213
+ +SG ++ F D RV + QV ++AYV+ YEL SS
Sbjct: 622 TAYCRNPNSGEWYTFNDSRVTPMSSSQVRSSDAYVLFYELASSS 665
>gi|224081136|ref|XP_002306306.1| predicted protein [Populus trichocarpa]
gi|222855755|gb|EEE93302.1| predicted protein [Populus trichocarpa]
Length = 370
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 69/136 (50%), Gaps = 9/136 (6%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
+LSLDI Q SS+ L F + E L ++ + C+KC EA K+ I+KPP + ++ L
Sbjct: 197 FDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHL 256
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMH---CRRNLVSAVIHHGSSSFSGHYNCIG 176
KRF Y+ K+S V PL L+ + +L + V+H GS GHY +
Sbjct: 257 KRFKYIEQLGRYKKLSYRVVFPLELKLSNTVEDADIEYSLFAVVVHVGSGPNHGHYVSL- 315
Query: 177 STSSGSYHYFGDDRVQ 192
S + +F D+ V+
Sbjct: 316 VKSHNHWLFFDDENVE 331
>gi|403164667|ref|XP_003324741.2| hypothetical protein PGTG_06278 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
gi|375165262|gb|EFP80322.2| hypothetical protein PGTG_06278 [Puccinia graminis f. sp. tritici
CRL 75-36-700-3]
Length = 1285
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 50/165 (30%), Positives = 79/165 (47%), Gaps = 22/165 (13%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS++I+Q +SL L QF A E L + N + C++C EA K+ I+K P V L L
Sbjct: 413 LDLSINIHQNTSLTACLRQFSASEMLCQKNKFSCDQCCSLQEAEKRMKIKKLPNVLALHL 472
Query: 125 KRFNY---------LCLKISCAVQVPLYLEFGKFMHCRR--NLVSAVIHHGSSSFSGHYN 173
KRF Y L ++ ++ L+ R L + V+H G+ GHY
Sbjct: 473 KRFKYQENLQRYTKLTYRVVFPFELKLFNTTDDIQDPDRLYELWAIVVHIGAGPHHGHYV 532
Query: 174 CIGSTSSGSYHYFGDD---RVQASNLQQ-------VTNAYVVIYE 208
I S G + F D+ R++ ++Q+ V + YV+ Y+
Sbjct: 533 TILK-SHGQWLLFDDNIVTRIEERDIQKYYGDTPGVGSGYVLFYQ 576
>gi|392597880|gb|EIW87202.1| cysteine proteinase, partial [Coniophora puteana RWD-64-598 SS2]
Length = 275
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 66/234 (28%), Positives = 95/234 (40%), Gaps = 52/234 (22%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLI--------------------- 48
A+ G+ + P I+KLK + F +D+HEFL YL+
Sbjct: 18 ADKGT-VAPRAFIDKLKELNEAFRNTMHQDAHEFLNYLLNRIVEEIEEEKKNLHANGNGG 76
Query: 49 -----------EGIHRSYLKVIS-------GSNNLELSLDIYQLSSLDEALGQFFAKEYL 90
EGI S + ++ + L+LS+DI SS+ L QF A E L
Sbjct: 77 DNGSTFIHQIFEGILTSETRCLTCEKVSARDESFLDLSIDIEANSSVTACLRQFSASEML 136
Query: 91 VRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQVPLYLE 145
+ N + C+ C EA K+ I++ P V L LKRF Y +K++ V P L
Sbjct: 137 CQRNKFFCDGCCDYQEAEKRMKIKRLPNVLALHLKRFKYQEEVQKYIKLAYRVAFPFELR 196
Query: 146 FGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
+ N L + V+H GS GHY I T G + F D+ V
Sbjct: 197 LFNTVDDAENPDRMYELFAIVVHIGSGPNHGHYVSIIKT-MGIWLIFDDETVDT 249
>gi|50548343|ref|XP_501641.1| YALI0C09438p [Yarrowia lipolytica]
gi|49647508|emb|CAG81946.1| YALI0C09438p [Yarrowia lipolytica CLIB122]
Length = 526
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 45/154 (29%), Positives = 74/154 (48%), Gaps = 15/154 (9%)
Query: 64 NLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILL 123
+L L + + +SL L ++ A E + Y CE C +K +++KPP+V
Sbjct: 373 DLSLQIPLKGQASLSSCLDKYTAPEQME----YFCENCKSHESVSKTLALKKPPVVLSFQ 428
Query: 124 LKRFNYL---CLKISCAVQVPLYLEFGKFMHCRRN-----LVSAVIHHGSSSFSGHYNCI 175
LKRF + KI V+ PLYL+ + + + L + V HHGS + +GHY C+
Sbjct: 429 LKRFQHTGSSSSKIDTHVEFPLYLDMSPYTCSQESGLVYELYAVVCHHGSLN-TGHYTCM 487
Query: 176 GSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
++ F D + ++QQV AY++ Y
Sbjct: 488 VKGRDMHWYNFDDVTITRVDVQQVLAARAYLLFY 521
>gi|300680898|sp|B0Y4P5.1|CREB_ASPFC RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase creB;
AltName: Full=Carbon catabolite repression protein B;
AltName: Full=Deubiquitinating enzyme creB; AltName:
Full=Ubiquitin thioesterase creB; AltName:
Full=Ubiquitin-hydrolyzing enzyme creB; AltName:
Full=Ubiquitin-specific-processing protease creB
gi|159125527|gb|EDP50644.1| ubiquitin C-terminal hydrolase CreB [Aspergillus fumigatus A1163]
Length = 767
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P + L L
Sbjct: 296 LDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 355
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 356 KRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 415
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 416 AIIKTEDRGWLLFDDEMVEPVDKNYVKNFFGDKPGLACAYVLFYQ 460
>gi|344297597|ref|XP_003420483.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like [Loxodonta africana]
Length = 529
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 100/235 (42%), Gaps = 46/235 (19%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV------------------- 58
P ++ +A ++ ED+HEFL+ ++ + ++ L+
Sbjct: 135 PGDVMEPSHALARGLHRHQQEDAHEFLMSALDAVQKACLRSHRHLRGLSEDTTLIRRIFG 194
Query: 59 -----------ISGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G ++ L+++LDI S+++AL Q E L +N YQC C
Sbjct: 195 GYWRSRIQCCHCQGVSDTFDPYLDITLDIQAAQSVNQALEQLVTAEELDGENSYQCRICQ 254
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K ++ P +L+LKRF+ L K + V+ P L+ + + R++
Sbjct: 255 RKMPASKTLTLHTCPEALVLVLKRFSDLSGDKNAKQVRYPASLDVSRCLS-RQDGGPAAY 313
Query: 156 -LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G + +GHY +G ++ D V A ++ V AY + Y
Sbjct: 314 RLYAVLVHVGWTCHTGHYLSYVKAGNGKWYRMDDAEVSACDVTCVLSQQAYALFY 368
>gi|261205668|ref|XP_002627571.1| ubiquitin C-terminal hydrolase CreB [Ajellomyces dermatitidis
SLH14081]
gi|239592630|gb|EEQ75211.1| ubiquitin C-terminal hydrolase CreB [Ajellomyces dermatitidis
SLH14081]
Length = 790
Score = 63.2 bits (152), Expect = 9e-08, Method: Composition-based stats.
Identities = 45/150 (30%), Positives = 67/150 (44%), Gaps = 11/150 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F +E L N + C+ CG EA K+ I++ P + L L
Sbjct: 317 LDLSVDLDQHSSVTSCLRKFSEEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 376
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P YL + L + V+H G + GHY
Sbjct: 377 KRFKYTEDLQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 436
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAY 203
I T + F D+ V+ + V N +
Sbjct: 437 AIIKTEDRGWLLFDDEMVEPVDKNYVRNFF 466
>gi|402874529|ref|XP_003901088.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3-like [Papio
anubis]
Length = 351
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 83/288 (28%), Positives = 117/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 53 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 112
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S SN L+LS
Sbjct: 113 GVSRSAILQENSTLSASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 172
Query: 69 LDI-YQLSS-------------LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI Q S + + L F E L LY C KC K ++TK+F I+
Sbjct: 173 LDIPSQFRSKRSKNQENGPVCWVRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 232
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E C +L + V+
Sbjct: 233 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVV 292
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY +T G + +F D V ++ + V AY++ Y
Sbjct: 293 HHGSGVGSGHYTAY-ATHEGRWFHFNDSTVTLTDEETVVKAKAYILFY 339
>gi|407929229|gb|EKG22064.1| Peptidase C19 ubiquitin carboxyl-terminal hydrolase 2 [Macrophomina
phaseolina MS6]
Length = 693
Score = 63.2 bits (152), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F +E L N + C+ CG EA K+ +++ P + L L
Sbjct: 161 LDLSVDLEQNSSVTSCLKRFSEEEMLCERNKFHCDNCGGLQEAEKRMKVKRLPRILALHL 220
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P YL + L + V+H G ++ GHY
Sbjct: 221 KRFKYTEDMQRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYELYAVVVHIGGGAYHGHYV 280
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 281 SIIKTEDRGWLLFDDEMVEPVDKAYVRNFFGGENVLACAYVLFYQ 325
>gi|294658181|ref|XP_460519.2| DEHA2F03520p [Debaryomyces hansenii CBS767]
gi|202952935|emb|CAG88832.2| DEHA2F03520p [Debaryomyces hansenii CBS767]
Length = 697
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 75/157 (47%), Gaps = 15/157 (9%)
Query: 73 QLSSLDEALGQFFAKEYLVRDNL-----YQCEKCGYKTEATKQFSIEKPPIVFILLLKRF 127
Q ++++++ +FF+ E + D Y CE C K+ A K +I++ P + LKRF
Sbjct: 522 QRYTIEKSIQEFFSSELIKLDRKDKSSGYDCENCKQKSNACKISTIDRSPETLTVHLKRF 581
Query: 128 NY---LCLKISCAVQVPLYLEFGKFMHCRR----NLVSAVIHHGSSSFSGHYNCIGSTSS 180
+ K+ ++ P YL+ KF + LVS ++H G S SGHY
Sbjct: 582 KFNGNSSSKVKQSISYPNYLDLTKFTTLKTPTKYQLVSVIVHEGRSISSGHYIAHCLQPD 641
Query: 181 GSYHYFGDDRVQASNLQQV---TNAYVVIYELLPSSL 214
G++ + D+ + N ++ +AYV++Y L L
Sbjct: 642 GTWSTYDDEYINKINEKEALSDPSAYVLVYTKLTPRL 678
>gi|358338304|dbj|GAA56635.1| ubiquitin carboxyl-terminal hydrolase 12/46 [Clonorchis sinensis]
Length = 828
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/138 (34%), Positives = 64/138 (46%), Gaps = 12/138 (8%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+DI Q S+ L F E + +N Y CE C K EA K ++KPP++ L L
Sbjct: 537 LDLSVDIAQNCSIVYCLKFFSDTEMMQSENKYYCEFCRCKQEAQKCMRVKKPPLILALHL 596
Query: 125 KRFNY-----LCLKISCAVQVPLYLEF------GKFMHCRRNLVSAVIHHGSSSFSGHYN 173
KRF Y K+SC V P L + L++ V+H GS GHY
Sbjct: 597 KRFKYSEEVNSFTKLSCRVVFPTELRLPNTSGGAADQNWLYKLIAVVVHSGSGPNRGHYV 656
Query: 174 CIGSTSSGSYHYFGDDRV 191
+ S G + F D+ V
Sbjct: 657 TL-VKSHGLWLLFDDEVV 673
>gi|300681027|sp|Q4WQI1.3|CREB_ASPFU RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase creB;
AltName: Full=Carbon catabolite repression protein B;
AltName: Full=Deubiquitinating enzyme creB; AltName:
Full=Ubiquitin thioesterase creB; AltName:
Full=Ubiquitin-hydrolyzing enzyme creB; AltName:
Full=Ubiquitin-specific-processing protease creB
Length = 775
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P + L L
Sbjct: 302 LDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 361
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 362 KRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 421
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 422 AIIKTEDRGWLLFDDEMVEPVDKNYVKNFFGDKPGLACAYVLFYQ 466
>gi|321456319|gb|EFX67430.1| hypothetical protein DAPPUDRAFT_261673 [Daphnia pulex]
Length = 722
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 55/202 (27%), Positives = 92/202 (45%), Gaps = 35/202 (17%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LSL +LDE L +F +E L + Y CE C K AT+ + P + + L
Sbjct: 207 LDLSLGSKSDVTLDECLAEFLHEEKLEGTDQYFCENCSSKQNATRSIRLRHLPAMLNIQL 266
Query: 125 KRFNY-----LCLKISCAVQVPLYLEFGKFMHCRR--------NLVSAVIHHGSSSFSGH 171
RF + L K+S V P +E ++ + +L + +IH G S++SGH
Sbjct: 267 LRFVFDRKTGLKKKVSSMVHFPFVVEMSNYVKTQGVEPSSLTYDLSAVLIHRGPSAYSGH 326
Query: 172 YNC-IGSTSSGSYHYFGD---DRVQASNLQ-------QVT-------NAYVVIYE----L 209
Y I +G+++ F D +++ +N + +VT NAY+++Y
Sbjct: 327 YIAHIKDPVTGTWYKFNDGVVQKIEGTNFKLGIEEDLEVTKGSHGSSNAYMLVYSRRDAA 386
Query: 210 LPSSLHHLNSSLHSSSPGSVEP 231
P S+ +++ S P SV P
Sbjct: 387 KPESVPVCSTTPSLSDPCSVLP 408
>gi|195143509|ref|XP_002012740.1| GL23766 [Drosophila persimilis]
gi|194101683|gb|EDW23726.1| GL23766 [Drosophila persimilis]
Length = 421
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 12/162 (7%)
Query: 63 NNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFIL 122
N +L +D+ Q +S+ L F E L DN ++C+ C EA K+ ++K P++ L
Sbjct: 247 NFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILAL 306
Query: 123 LLKRFNYLC-----LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGH 171
LKRF Y+ +K+S V PL L ++ R +L + VIH GS GH
Sbjct: 307 HLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGH 366
Query: 172 YNCIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
Y I S G + F DD V + + Y + ++ SS
Sbjct: 367 YISI-VKSHGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSS 407
>gi|134111809|ref|XP_775440.1| hypothetical protein CNBE1550 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50258099|gb|EAL20793.1| hypothetical protein CNBE1550 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 802
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 56/216 (25%), Positives = 90/216 (41%), Gaps = 27/216 (12%)
Query: 43 FLLYLIEGIHRSYLKVIS-------GSNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNL 95
F+ L +GI S K +S ++LS+DI Q S+ L QF + E +
Sbjct: 366 FVEALFQGITTSETKCLSCETISSRDEEFIDLSVDIEQHCSITSCLRQFSSDEMMSGREK 425
Query: 96 YQCEKCGYKTEATKQFSIEKPPIVFILLLKRF----NYLCLKISCAVQVPLYL-EFGKFM 150
+ CE C EA + I++ P + + LKRF +Y +K+ V P L
Sbjct: 426 FSCESCSGHQEAKRSIRIKRLPPILAVHLKRFAHNESYRAIKLFYRVNHPTTLIPPNTTD 485
Query: 151 HCRR-----NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVT----- 200
+C +LV+ ++H G+ GHY + T SG + DD ++A Q+
Sbjct: 486 NCENPDQIYDLVAIMVHIGNGPVQGHYVTVKRTPSGRWVMCDDDNIEAIEENQLEYWLGN 545
Query: 201 ----NAYVVIYELLPSSLHHLNSSLHSSSP-GSVEP 231
YV+ Y+ + H+ + P G EP
Sbjct: 546 RTQGQGYVLFYQARGITAEHVGLKVEKRKPNGVFEP 581
>gi|254566709|ref|XP_002490465.1| Ubiquitin-specific protease [Komagataella pastoris GS115]
gi|238030261|emb|CAY68184.1| Ubiquitin-specific protease [Komagataella pastoris GS115]
gi|328350857|emb|CCA37257.1| ubiquitin carboxyl-terminal hydrolase 22/27/51 [Komagataella
pastoris CBS 7435]
Length = 502
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/252 (26%), Positives = 104/252 (41%), Gaps = 63/252 (25%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL-----------------KVIS 60
P ++ + + Y +D+HEF +L++ IH+S K +
Sbjct: 251 PTALLTAAWRVKNSLAGYSEQDAHEFWQFLLDEIHKSDTELHPELDDTSTCRCITHKTFA 310
Query: 61 G-------------SNN-----LELSLDIYQLS----SLDEALGQFFAKEYLVRDNLYQC 98
G S N L+LSL+I ++S +L++ L F +KE L D++ C
Sbjct: 311 GQLQSTVTCEKCLHSKNTVDPMLDLSLEIAKISKDKVTLNDCLDLFTSKEKL--DSMTIC 368
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC---LKISCAVQVPLYLEFGKFMHCRR- 154
C +T TKQ + K P + LKRF + KI V PL+L+ +
Sbjct: 369 SHCKKETTRTKQLLVRKLPPILAFQLKRFEHSASSSTKIETHVGFPLFLDMEPYTVSETL 428
Query: 155 ---------------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV 199
L + VIH GS + +GHY CI G++ F D R+ + V
Sbjct: 429 NSNEQGRASWGLMTYQLFAIVIHIGSVN-TGHYICIIKNRDGNWFKFDDSRITLVSQDYV 487
Query: 200 --TNAYVVIYEL 209
+NAY++ Y L
Sbjct: 488 SKSNAYLLYYIL 499
>gi|255580900|ref|XP_002531269.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
gi|223529154|gb|EEF31133.1| Ubiquitin carboxyl-terminal hydrolase, putative [Ricinus communis]
Length = 369
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 69/136 (50%), Gaps = 9/136 (6%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
+LSLDI Q SS+ L F + E L ++ + C+KC EA K+ I+KPP + ++ L
Sbjct: 197 FDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHL 256
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMH---CRRNLVSAVIHHGSSSFSGHYNCIG 176
KRF Y+ K+S V PL L+ + +L + V+H GS GHY +
Sbjct: 257 KRFKYIEQLSRYKKLSYRVVFPLELKLSNTVEDSDIEYSLFAVVVHVGSGPNHGHYVSL- 315
Query: 177 STSSGSYHYFGDDRVQ 192
S + +F D+ V+
Sbjct: 316 VKSHNHWLFFDDENVE 331
>gi|212541927|ref|XP_002151118.1| ubiquitin hydrolase CreB [Talaromyces marneffei ATCC 18224]
gi|210066025|gb|EEA20118.1| ubiquitin hydrolase CreB [Talaromyces marneffei ATCC 18224]
Length = 730
Score = 63.2 bits (152), Expect = 1e-07, Method: Composition-based stats.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P + L L
Sbjct: 280 LDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPKILALHL 339
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 340 KRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 399
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 400 SIIKTEDRGWLLFDDEMVEPVDKSYVHNFFGDRPGLACAYVLFYQ 444
>gi|357463327|ref|XP_003601945.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
gi|355490993|gb|AES72196.1| Ubiquitin carboxyl-terminal hydrolase [Medicago truncatula]
Length = 366
Score = 63.2 bits (152), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/234 (24%), Positives = 88/234 (37%), Gaps = 67/234 (28%)
Query: 9 QAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE------------------- 49
Q I P+ + +LK F Y +D+HEFL YL+
Sbjct: 82 QKRKTGVIAPKRFVQRLKKQNELFRSYMHQDAHEFLNYLLNELVDILEREAHAEKDDQGT 141
Query: 50 --------------------------GIHRSYLKVISGSNN--------------LELSL 69
+H+++ +++ +LSL
Sbjct: 142 LLPSEKIANGPKSGLANGAKKAPLATWVHKNFQGILTNETRCLQCETVTARDETFFDLSL 201
Query: 70 DIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY 129
DI Q SS+ L F + E L ++ + C+KC EA K+ I++PP V ++ LKRF Y
Sbjct: 202 DIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKRPPRVLVIHLKRFKY 261
Query: 130 L-----CLKISCAVQVPLYLEFGKF---MHCRRNLVSAVIHHGSSSFSGHYNCI 175
+ K+S V PL L +L + V+H GS GHY C+
Sbjct: 262 MEQLGRYKKLSYRVVFPLELRLSDTDEEADIEYSLFAVVVHVGSGPNHGHYVCL 315
>gi|258573855|ref|XP_002541109.1| CREB protein [Uncinocarpus reesii 1704]
gi|237901375|gb|EEP75776.1| CREB protein [Uncinocarpus reesii 1704]
Length = 738
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/165 (30%), Positives = 72/165 (43%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F +E L N + C+ CG EA K+ I++ P V L L
Sbjct: 274 LDLSVDLEQHSSVTACLRKFSEEEVLCERNKFHCDNCGGLQEAEKRMKIKRLPKVLALHL 333
Query: 125 KRFNY-----LCLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P YL + L + V+H G + GHY
Sbjct: 334 KRFKYSEELDRLQKLFHRVVYPYYLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 393
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 394 AIIKTVDRGWLLFDDEMVEPVDKSFVRNFFGDRPGLGSAYVLFYQ 438
>gi|115451255|ref|NP_001049228.1| Os03g0190800 [Oryza sativa Japonica Group]
gi|24756890|gb|AAN64154.1| Putative ubiquitin-specific protease 3 [Oryza sativa Japonica
Group]
gi|108706601|gb|ABF94396.1| Ubiquitin carboxyl-terminal hydrolase 4, putative, expressed [Oryza
sativa Japonica Group]
gi|113547699|dbj|BAF11142.1| Os03g0190800 [Oryza sativa Japonica Group]
gi|125542717|gb|EAY88856.1| hypothetical protein OsI_10330 [Oryza sativa Indica Group]
gi|125585222|gb|EAZ25886.1| hypothetical protein OsJ_09723 [Oryza sativa Japonica Group]
gi|215697258|dbj|BAG91252.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 366
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/171 (30%), Positives = 80/171 (46%), Gaps = 29/171 (16%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
+LSLDI Q SS+ L F + E L ++ + C+KC EA K+ I+KPP + ++ L
Sbjct: 196 FDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPNILVIHL 255
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L K ++ N L + ++H GS GHY
Sbjct: 256 KRFKYIEQLGRYKKLSYRVVFPLEL---KLINTVDNSDLEYSLFAVLVHVGSGPNHGHYI 312
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQV--------------TNAYVVIYELL 210
+ S + +F D+ V+ ++ V N Y++ YE L
Sbjct: 313 SL-VKSHNHWLFFDDENVEMTDESMVQTFFGSAQEFSGNTDNGYILFYESL 362
>gi|344297603|ref|XP_003420486.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Loxodonta
africana]
Length = 621
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 57/235 (24%), Positives = 100/235 (42%), Gaps = 46/235 (19%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH----RSY--LKVISGSNNL------ 65
P ++ +A ++ ED+HEFL+ ++ + RSY L+ +S L
Sbjct: 135 PGDVMEPSHALARGLHRHQQEDAHEFLMSTLDAVQKACLRSYRHLRGLSEDTTLIRRIFG 194
Query: 66 -----------------------ELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
+++LDI S+++AL Q E L +N YQC C
Sbjct: 195 GYWRSRIQCRHCQGVSDTFDPYLDITLDIQAAQSVNQALEQLVTAEELDGENSYQCRICQ 254
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K ++ P +L+LKRF+ L K + V+ P L+ + + R++
Sbjct: 255 RKMPASKTLTLHTCPEALVLVLKRFSDLSGDKNAKQVRYPASLDVSRCLS-RQDGGPAAY 313
Query: 156 -LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G + +GHY +G ++ D V A ++ V AY + Y
Sbjct: 314 RLYAVLVHVGWTCHTGHYLSYVKAGNGKWYRMDDAEVSACDVTCVLSQQAYALFY 368
>gi|195443886|ref|XP_002069621.1| GK11474 [Drosophila willistoni]
gi|194165706|gb|EDW80607.1| GK11474 [Drosophila willistoni]
Length = 438
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 12/162 (7%)
Query: 63 NNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFIL 122
N +L +D+ Q +S+ L F E L DN ++C+ C EA K+ ++K P++ L
Sbjct: 264 NFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILAL 323
Query: 123 LLKRFNYLC-----LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGH 171
LKRF Y+ +K+S V PL L ++ R +L + VIH GS GH
Sbjct: 324 HLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGH 383
Query: 172 YNCIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
Y I S G + F DD V + + Y + ++ SS
Sbjct: 384 YISI-VKSHGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSS 424
>gi|390337799|ref|XP_783431.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 12-like
[Strongylocentrotus purpuratus]
Length = 370
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 53/163 (32%), Positives = 76/163 (46%), Gaps = 18/163 (11%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q +S+ L F E L + Y CE C K EA K+ ++K P + L L
Sbjct: 199 LDLSVDVEQNTSITHCLRGFSNTETLCHEYKYYCETCCSKQEAQKRMQVKKLPQLLALHL 258
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRR---------NLVSAVIHHGSSSFSG 170
KRF Y+ K+S V PL L + M+ +LVS V+H GS G
Sbjct: 259 KRFKYMEQSHRYTKLSYRVVFPLEL---RLMNTSDDAEAPDKLYDLVSVVVHCGSGPNRG 315
Query: 171 HYNCIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
HY I S G + F DD V+ + + Y + E+ +S
Sbjct: 316 HYITI-VKSFGFWLLFDDDMVEKIEISSIEEFYGLATEVQKNS 357
>gi|70794797|ref|NP_001020595.1| ubiquitin carboxyl-terminal hydrolase 3 [Rattus norvegicus]
gi|68480670|gb|AAY97907.1| ubiquitin specific protease 3 [Rattus norvegicus]
Length = 520
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 79/288 (27%), Positives = 115/288 (39%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F YR +D+HEF+ YL++
Sbjct: 222 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYRQQDAHEFMRYLLDHLHLELQGGFN 281
Query: 50 GIHRSYL----KVISGSNN-------------------------------------LELS 68
G+ RS + +S +N L+LS
Sbjct: 282 GVSRSAILQENSTLSANNKCCINGASTVVTTIFGGILQNEVNCLICGTESRKFDPFLDLS 341
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 342 LDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 401
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPLY-LEFGKFM---------HCRRNLVSAVI 161
K P L LKRF+ YL K+ VQ PL L+ ++ C +L + +
Sbjct: 402 KLPKALCLHLKRFHWTAYLRNKVDTYVQFPLRGLDMKCYLLEPENSGPDSCLYDLAAVFV 461
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY + G + +F D V ++ + V AY++ Y
Sbjct: 462 HHGSGVGSGHYTAY-AVHEGRWFHFNDSTVTVTDEETVGKAKAYILFY 508
>gi|300681008|sp|A1CIL1.2|CREB_ASPCL RecName: Full=Probable ubiquitin carboxyl-terminal hydrolase creB;
AltName: Full=Carbon catabolite repression protein B;
AltName: Full=Deubiquitinating enzyme creB; AltName:
Full=Ubiquitin thioesterase creB; AltName:
Full=Ubiquitin-hydrolyzing enzyme creB; AltName:
Full=Ubiquitin-specific-processing protease creB
Length = 760
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P + L L
Sbjct: 303 LDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 362
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 363 KRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 422
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 423 AIIKTEDRGWLLFDDELVEPVDKNYVRNFFGDKPGLACAYVLFYQ 467
>gi|296213409|ref|XP_002753258.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 isoform 1
[Callithrix jacchus]
Length = 520
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 81/288 (28%), Positives = 117/288 (40%), Gaps = 82/288 (28%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE----------- 49
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++
Sbjct: 222 FRKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFN 281
Query: 50 GIHRSYL------------KVISGSNN-----------------------------LELS 68
G+ RS + I+G++ L+LS
Sbjct: 282 GVSRSAILQENSTLFASNKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLS 341
Query: 69 LDIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIE 114
LDI + SL + L F E L LY C KC K ++TK+F I+
Sbjct: 342 LDIPSQFRSKRSKNQENGPVCSLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQ 401
Query: 115 KPPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVI 161
K P V L LKRF+ YL K+ V+ PL YL E C +L + V+
Sbjct: 402 KLPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVV 461
Query: 162 HHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HHGS SGHY + G + +F D V ++ + V AY++ Y
Sbjct: 462 HHGSGVGSGHYTAYAA-HEGRWFHFNDSTVTVTDEETVVKAKAYILFY 508
>gi|224066813|ref|XP_002302228.1| predicted protein [Populus trichocarpa]
gi|222843954|gb|EEE81501.1| predicted protein [Populus trichocarpa]
Length = 1055
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 14/143 (9%)
Query: 66 ELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLK 125
EL L++ L SLDE+L Q+ + E L +N Y CE C +AT + + P V LK
Sbjct: 245 ELELNVKGLKSLDESLDQYLSVEQLHGENQYNCELCKSTVDATHRIRLRTLPDVLNFQLK 304
Query: 126 RFNYLC-----LKISCAVQVPLYLEFG------KFMHCRRNLVSAVIHHGSSSFSGHYNC 174
R+ +L KI+ A P L+ G + +L + +IH G++ SGHY
Sbjct: 305 RYEFLPKTTTRKKITSAFGFPGELDMGLRLSEPSQLEWIYDLSAVLIHKGTAVNSGHYIA 364
Query: 175 -IGSTSSGSYHYFGDDRVQASNL 196
I ++G + F D+ V SNL
Sbjct: 365 HIKDENTGQWWVFDDEHV--SNL 385
>gi|50305101|ref|XP_452509.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49641642|emb|CAH01360.1| KLLA0C06974p [Kluyveromyces lactis]
Length = 446
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 91/229 (39%), Gaps = 51/229 (22%)
Query: 28 IAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN----------------------- 64
I HH +D+HE+ +L+ +H + +V S
Sbjct: 217 INHHLVGSSQQDAHEYWQFLLNQLHTDHARVFGSSKAPDCQCITHRIFQGYLKNTLQCSQ 276
Query: 65 -----------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSI 113
++LSL+I L++ L F +E L D Y+C+ C KQ ++
Sbjct: 277 CGFSKTTIDPIMDLSLEIKNNPKLEDCLDHFQREETLT-DFHYECQSCKQNQGVVKQLTL 335
Query: 114 EKPPIVFILLLKRF----NYLCLKISCAVQVPLYLEFGKFM---------HCRRNLVSAV 160
K P V ++ LKRF N K++ VQ PL+L + + +L++ V
Sbjct: 336 HKAPNVLVIQLKRFEHQLNGQSAKLNDRVQFPLHLNLKPHLFQIEDEYIPNIAYDLLNVV 395
Query: 161 IHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
H G+ GHY + T G + F D V + +QV AY++ Y
Sbjct: 396 SHQGTVD-QGHYTTVSKTEDGQWFKFNDSVVTSVTEEQVLEQQAYLLFY 443
>gi|121708473|ref|XP_001272142.1| ubiquitin C-terminal hydrolase CreB [Aspergillus clavatus NRRL 1]
gi|119400290|gb|EAW10716.1| ubiquitin C-terminal hydrolase CreB [Aspergillus clavatus NRRL 1]
Length = 772
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P + L L
Sbjct: 315 LDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 374
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 375 KRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 434
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 435 AIIKTEDRGWLLFDDELVEPVDKNYVRNFFGDKPGLACAYVLFYQ 479
>gi|24649152|ref|NP_651099.1| CG7023 [Drosophila melanogaster]
gi|195331161|ref|XP_002032271.1| GM26467 [Drosophila sechellia]
gi|7300926|gb|AAF56066.1| CG7023 [Drosophila melanogaster]
gi|33636511|gb|AAQ23553.1| RE52890p [Drosophila melanogaster]
gi|194121214|gb|EDW43257.1| GM26467 [Drosophila sechellia]
gi|220951116|gb|ACL88101.1| CG7023-PB [synthetic construct]
Length = 424
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 12/162 (7%)
Query: 63 NNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFIL 122
N +L +D+ Q +S+ L F E L DN ++C+ C EA K+ ++K P++ L
Sbjct: 250 NFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILAL 309
Query: 123 LLKRFNYLC-----LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGH 171
LKRF Y+ +K+S V PL L ++ R +L + VIH GS GH
Sbjct: 310 HLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGH 369
Query: 172 YNCIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
Y I S G + F DD V + + Y + ++ SS
Sbjct: 370 YISI-VKSHGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSS 410
>gi|321453514|gb|EFX64742.1| hypothetical protein DAPPUDRAFT_65946 [Daphnia pulex]
Length = 347
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 14/142 (9%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LSL +LDE L +F +E L + Y CE C K AT+ + P + + L
Sbjct: 108 LDLSLGSKSDVTLDECLAEFLHEEKLEGTDQYFCENCSSKQNATRSIRLRHLPAMLNIQL 167
Query: 125 KRFNY-----LCLKISCAVQVPLYLEFGKFMHCRR--------NLVSAVIHHGSSSFSGH 171
RF + L K+S V P +E ++ + +L + +IH G S++SGH
Sbjct: 168 LRFVFDRKTGLKKKVSSMVHFPFVVEMSNYVETQGVAPSSLTYDLSAVLIHRGPSAYSGH 227
Query: 172 YNC-IGSTSSGSYHYFGDDRVQ 192
Y I +G+++ F D+ VQ
Sbjct: 228 YIAHIKDPVTGTWYKFNDEVVQ 249
>gi|242770179|ref|XP_002341925.1| ubiquitin C-terminal hydrolase CreB [Talaromyces stipitatus ATCC
10500]
gi|218725121|gb|EED24538.1| ubiquitin C-terminal hydrolase CreB [Talaromyces stipitatus ATCC
10500]
Length = 762
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P + L L
Sbjct: 317 LDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPKILALHL 376
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 377 KRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 436
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 437 SIIKTEDRGWLLFDDEMVEPVDKSYVRNFFGDRPGLACAYVLFYQ 481
>gi|150865635|ref|XP_001384943.2| hypothetical protein PICST_32361 [Scheffersomyces stipitis CBS
6054]
gi|149386891|gb|ABN66914.2| predicted protein [Scheffersomyces stipitis CBS 6054]
Length = 565
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 81/170 (47%), Gaps = 29/170 (17%)
Query: 65 LELSLDIYQLSS--------LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKP 116
++LSL+I L S L + L F + E L D +Y C+ CG KT+A K S++
Sbjct: 393 VDLSLEINHLKSNHPGSQIDLYDCLDLFTSDEKL--DVMYTCQSCGDKTKAIKSLSVKSL 450
Query: 117 PIVFILLLKRFNYLCL-----KISCAVQVPLYLEFGKFM-----HCRRNL-------VSA 159
P V + LKRF + L KI +++PLYL ++ H + + A
Sbjct: 451 PPVLSIQLKRFKHNSLNDTSSKIETPIKIPLYLNMTRYSIGHDPHDSEQIDEDKIFELFA 510
Query: 160 VIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
++ H S +GHY + +G + F D V + ++V TNAY+V Y
Sbjct: 511 LVCHIGSVNTGHYIVLTKDGNGQWFKFDDSVVSMVSQEEVTNTNAYLVFY 560
>gi|322705635|gb|EFY97219.1| ubiquitin hydrolase CreB [Metarhizium anisopliae ARSEF 23]
Length = 790
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + +S+ L +F A+E L N + C+ CG EA K+ +++ P + L L
Sbjct: 353 LDLSIDLEEHASVTSCLRKFSAEEMLCERNKFHCDHCGGLQEAEKRMKVKRLPKILTLHL 412
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G +++ GHY
Sbjct: 413 KRFKYTEDYSRLQKLFHRVVYPYHLRMFNTTDDAEDPDRLYELYAVVVHIGGNAYHGHYV 472
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 473 SIIKTKDRGWLLFDDEMVEPVDKHFVRNFFGDKPGMATAYVLFYQ 517
>gi|198450754|ref|XP_001358111.2| GA20039 [Drosophila pseudoobscura pseudoobscura]
gi|198131177|gb|EAL27248.2| GA20039 [Drosophila pseudoobscura pseudoobscura]
Length = 432
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 12/162 (7%)
Query: 63 NNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFIL 122
N +L +D+ Q +S+ L F E L DN ++C+ C EA K+ ++K P++ L
Sbjct: 258 NFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILAL 317
Query: 123 LLKRFNYLC-----LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGH 171
LKRF Y+ +K+S V PL L ++ R +L + VIH GS GH
Sbjct: 318 HLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGH 377
Query: 172 YNCIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
Y I S G + F DD V + + Y + ++ SS
Sbjct: 378 YISI-VKSHGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSS 418
>gi|357604445|gb|EHJ64192.1| putative ubiquitin specific protease 41 [Danaus plexippus]
Length = 913
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/144 (33%), Positives = 70/144 (48%), Gaps = 12/144 (8%)
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFN---YLCLK 133
L + L F +E L D C KCG + + K F++ K P V +L LKRF+ K
Sbjct: 769 LQQCLQHFVREEELDGDEKPTCSKCGVRRKCLKWFTVHKFPQVLVLHLKRFSPTERFRGK 828
Query: 134 ISCAVQVPLY-LEFGKF----MHCRRNLVSAVIHHGSSSFSGHYNC-IGSTSSGSYHYFG 187
+S V+ PL L+ F H NL AV +H +++SGHY +G +H +
Sbjct: 829 LSVVVEFPLSGLDMSPFAASPTHATYNLY-AVSNHSGTTYSGHYTAYCKHPYTGDWHEYN 887
Query: 188 DDRVQASNLQQVTN--AYVVIYEL 209
D RV + + + AYV+ YEL
Sbjct: 888 DSRVTPIRSRDIVSAEAYVLFYEL 911
>gi|297278990|ref|XP_002808266.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33-like [Macaca mulatta]
Length = 1001
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCL 132
+L + L FFA++ L DN+Y CEKC K ++K P + + LKRF +
Sbjct: 627 TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFST 686
Query: 133 KISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
KIS V PL L+ F+ +L+S + HHG++S SGHY + +
Sbjct: 687 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS-SGHYIAYCRNNLNNLW 745
Query: 185 YFGDDR----VQASNLQQVTNAYVVIY 207
Y DD+ V S +Q AYV+ Y
Sbjct: 746 YEFDDQSVTEVSESTVQN-AEAYVLFY 771
>gi|167527071|ref|XP_001747868.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163773617|gb|EDQ87255.1| predicted protein [Monosiga brevicollis MX1]
Length = 900
Score = 62.8 bits (151), Expect = 1e-07, Method: Composition-based stats.
Identities = 59/209 (28%), Positives = 87/209 (41%), Gaps = 38/209 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
++ T A + A P ++ LKL E + +DSHEFL I R
Sbjct: 239 LQLTFAFLSSSLQRAYRPAHLVQALKL-----EPHVQQDSHEFLKLFAALIER------- 286
Query: 61 GSNNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVF 120
N EL Q L +L +E+L DN Y C +C K +A +Q +++ P V
Sbjct: 287 ---NFEL-----QHGDLIRSLQAMLTEEHLTGDNQYHCSQCEAKHDAARQVLLDQLPDVL 338
Query: 121 ILLLKRFNYLCL-----KISCAVQVPLYLEFGKFMHC------RR------NLVSAVIHH 163
L L RF Y K++ A + P L+ F RR +L + ++H
Sbjct: 339 HLQLMRFVYDLTTFRKKKVTKAFRFPAVLDMSAFAKTTQGAKKRRSSDRLYDLSAVLLHR 398
Query: 164 GSSSFSGHYNC-IGSTSSGSYHYFGDDRV 191
GSS+ GHY I +G + F D+ V
Sbjct: 399 GSSATCGHYMAQIRHPKTGKWFLFNDEEV 427
>gi|307177521|gb|EFN66632.1| Ubiquitin carboxyl-terminal hydrolase 2 [Camponotus floridanus]
Length = 762
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 66/222 (29%), Positives = 100/222 (45%), Gaps = 27/222 (12%)
Query: 17 IPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNLELSLD-IYQLS 75
IP+ + K + Y R EDS ++ + G RS L S +++ ++LD + LS
Sbjct: 544 IPDSYTDMQKAVESWKRYLRSEDS--MIVDVFVGQLRSSLHCTS-CDHVSVTLDPFWDLS 600
Query: 76 ----------SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLK 125
L + L F +E L D C KC + + TK FSI+K P + ++ LK
Sbjct: 601 LPIPGRSGTVKLSQCLEHFTREEVLDGDEKPTCSKCQMRRKCTKSFSIQKFPKILVIHLK 660
Query: 126 RFNYLCL---KISCAVQVPLY-LEFGKFMH-----CRRNLVSAVIHHGSSSFSGHYNC-I 175
RF+ + K++ V PL L+ F C NL V +H +++SGHY
Sbjct: 661 RFSPMERFRGKLNVMVDFPLTGLDLSAFAAPRVPGCTYNLY-GVANHSGTTYSGHYTAYC 719
Query: 176 GSTSSGSYHYFGD--DRVQASNLQQVTNAYVVIYELLPSSLH 215
SG +H + D V +S + AYV+ YE P S H
Sbjct: 720 KHPYSGEWHEYNDSRVSVVSSRSVVSSEAYVLFYEQQPHSSH 761
>gi|340058350|emb|CCC52705.1| putative ubiquitin hydrolase [Trypanosoma vivax Y486]
Length = 558
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 67/140 (47%), Gaps = 9/140 (6%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCL 132
S+++ LG + +E L D+LY C C +ATKQ + P + + +KRF
Sbjct: 416 SIEDCLGAYCREETLDSDSLYHCISCKKNVKATKQLLLYSLPKILFITIKRFRSYGDFSN 475
Query: 133 KISCAVQVPLYLEFGKFMHCRR-----NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFG 187
KIS + +L+ FM + +LVS V H GS+ GHY TS G +
Sbjct: 476 KISDPIVFQKHLDMAPFMCSNQKNTIYSLVSVVNHQGSTG-GGHYTADCITSEGVWFSVS 534
Query: 188 DDRVQASNLQQVTNAYVVIY 207
D+RV+ S +AY++ Y
Sbjct: 535 DERVEESKSPDYRHAYILCY 554
>gi|62320711|dbj|BAD95379.1| putative ubiquitin carboxyl terminal hydrolase [Arabidopsis
thaliana]
gi|227202736|dbj|BAH56841.1| AT2G24640 [Arabidopsis thaliana]
Length = 418
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/149 (28%), Positives = 70/149 (46%), Gaps = 39/149 (26%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P II++L I + Y R ED+HE + + I+
Sbjct: 238 PMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLDEFGGEKVVPPRAQETTLIQY 297
Query: 50 ---GIHRSYLKVISGSN-------NLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQC 98
G+ +S ++ + SN ++L+++I+ SL+E L QF AKE+L DNLY+C
Sbjct: 298 IFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNLYKC 357
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRF 127
++C +A K+ SI P + + LKRF
Sbjct: 358 DRCDDYVKACKRLSIRCAPNILTIALKRF 386
>gi|344297599|ref|XP_003420484.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like [Loxodonta
africana]
Length = 529
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 54/235 (22%), Positives = 100/235 (42%), Gaps = 46/235 (19%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV------------------- 58
P ++ +A ++ ED+HEFL+ ++ + ++ L+
Sbjct: 135 PGDVMEPSHALARGLHRHQQEDAHEFLMSTLDAVQKACLRSHRHLRGLSEDTTLIRRIFG 194
Query: 59 -----------ISGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G ++ L+++LDI S+++AL Q E L +N YQC C
Sbjct: 195 GYWRSRIQCCHCQGVSDTFDPYLDITLDIQAAQSVNQALEQLVTVEELDGENSYQCRICQ 254
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K ++ P +L+LKRF+ L K + V+ P L+ + + R++
Sbjct: 255 RKMPASKTLTLHTCPEALVLVLKRFSDLSGDKNAKQVRYPASLDVSRCLS-RQDGGPAAY 313
Query: 156 -LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G + +GHY +G ++ D V A ++ V AY + Y
Sbjct: 314 RLYAVLVHVGWTCHTGHYLSYVKAGNGKWYRMDDAEVSACDVTCVLSQQAYALFY 368
>gi|194743990|ref|XP_001954481.1| GF16711 [Drosophila ananassae]
gi|190627518|gb|EDV43042.1| GF16711 [Drosophila ananassae]
Length = 416
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 12/162 (7%)
Query: 63 NNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFIL 122
N +L +D+ Q +S+ L F E L DN ++C+ C EA K+ ++K P++ L
Sbjct: 242 NFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILAL 301
Query: 123 LLKRFNYLC-----LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGH 171
LKRF Y+ +K+S V PL L ++ R +L + VIH GS GH
Sbjct: 302 HLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGH 361
Query: 172 YNCIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
Y I S G + F DD V + + Y + ++ SS
Sbjct: 362 YISI-VKSHGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSS 402
>gi|427783739|gb|JAA57321.1| Putative ubiquitin-specific protease [Rhipicephalus pulchellus]
Length = 387
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 73/160 (45%), Gaps = 12/160 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q +S+ L F E L ++ Y CE C K EA K+ ++K P++ L L
Sbjct: 217 LDLSVDVSQNTSITHCLRGFSNTETLCSEHKYYCENCCSKQEAQKRMRVKKLPMILALHL 276
Query: 125 KRFNYLC-----LKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+S V PL L N LV+ VIH GS GHY
Sbjct: 277 KRFKYTEQQNRHTKLSYRVVFPLELRLFNTSDDAYNPDRMYDLVAVVIHCGSGPNRGHYI 336
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
I S G + F DD V + + + Y + + +S
Sbjct: 337 SI-VKSHGLWLLFDDDIVDKIDASAIEDFYGLTSDTPKTS 375
>gi|350638345|gb|EHA26701.1| ubiquitin-specific protease [Aspergillus niger ATCC 1015]
Length = 708
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F A+E L N + C+ CG EA K+ I++ P + L L
Sbjct: 252 LDLSVDLEQHSSVTSCLRKFSAEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 311
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 312 KRFKYTEDLQRLQKLFHRVVYPYHLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 371
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + F D+ V+ + V N AYV+ Y+
Sbjct: 372 SIIKTQDRGWLLFDDEMVEPVDKNYVRNFFGDKPGLACAYVLFYQ 416
>gi|321453519|gb|EFX64747.1| hypothetical protein DAPPUDRAFT_333877 [Daphnia pulex]
Length = 374
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 43/142 (30%), Positives = 68/142 (47%), Gaps = 14/142 (9%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LSL +LDE L +F +E L + Y CE C K AT+ + P + + L
Sbjct: 111 LDLSLGSKSDVTLDECLAEFLHEEKLEGTDQYFCENCSSKQNATRSIRLRHLPAMLNIQL 170
Query: 125 KRFNY-----LCLKISCAVQVPLYLEFGKFMHCRR--------NLVSAVIHHGSSSFSGH 171
RF + L K+S V P +E ++ + +L + +IH G S++SGH
Sbjct: 171 LRFVFDRKTGLKKKVSSMVHFPFVVEMSNYVETQGVAPSSLTYDLSAVLIHRGPSAYSGH 230
Query: 172 YNC-IGSTSSGSYHYFGDDRVQ 192
Y I +G+++ F D+ VQ
Sbjct: 231 YIAHIKDPVTGTWYKFNDEVVQ 252
>gi|321258933|ref|XP_003194187.1| ubiquitin thiolesterase 9 [Cryptococcus gattii WM276]
gi|317460658|gb|ADV22400.1| Ubiquitin thiolesterase 9, putative [Cryptococcus gattii WM276]
Length = 732
Score = 62.4 bits (150), Expect = 1e-07, Method: Composition-based stats.
Identities = 50/187 (26%), Positives = 79/187 (42%), Gaps = 20/187 (10%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
++LS+DI Q S+ L QF + E + + CE C EA + I++ P + + L
Sbjct: 398 IDLSVDIEQHCSITSCLRQFSSDEMMSGREKFSCESCSGHQEAKRSIRIKRLPPILAIHL 457
Query: 125 KRF----NYLCLKISCAVQVPLYL-EFGKFMHCRR-----NLVSAVIHHGSSSFSGHYNC 174
KRF NY +K+ V P L +C +LV+ ++H G+ GHY
Sbjct: 458 KRFAHNENYRAIKLFYRVNHPTTLIPPNTTDNCENPDQIYDLVAIMVHIGNGPVQGHYVT 517
Query: 175 IGSTSSGSYHYFGDDRVQASNLQQVT---------NAYVVIYELLPSSLHHLNSSLHSSS 225
+ T SG + DD ++A Q+ YV+ Y+ + L +
Sbjct: 518 VKRTPSGRWVMCDDDNIEAIEENQLEYWLGNRTQGQGYVLFYQARGITAEQLGLKVEKRK 577
Query: 226 P-GSVEP 231
P G EP
Sbjct: 578 PNGVFEP 584
>gi|356540277|ref|XP_003538616.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 4-like [Glycine
max]
Length = 369
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 68/136 (50%), Gaps = 9/136 (6%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
+LSLDI Q SS+ L F + E L ++ + C+KC EA K+ I+KPP + ++ L
Sbjct: 197 FDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKPPHILVIHL 256
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMH---CRRNLVSAVIHHGSSSFSGHYNCIG 176
KRF Y+ K+S V PL L+ +L + V+H GS GHY +
Sbjct: 257 KRFKYIEQLGRYKKLSYRVVFPLELKLSDTAENSDIEYSLFAVVVHVGSGPNHGHYVSL- 315
Query: 177 STSSGSYHYFGDDRVQ 192
S + +F D+ V+
Sbjct: 316 VKSHNHWLFFDDENVE 331
>gi|302847648|ref|XP_002955358.1| hypothetical protein VOLCADRAFT_65702 [Volvox carteri f.
nagariensis]
gi|300259430|gb|EFJ43658.1| hypothetical protein VOLCADRAFT_65702 [Volvox carteri f.
nagariensis]
Length = 293
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/157 (32%), Positives = 69/157 (43%), Gaps = 19/157 (12%)
Query: 67 LSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKR 126
L LDI + S+ E L F E L DN Y+C+KC A KQ +I P V +L LKR
Sbjct: 138 LPLDIARARSVHEGLRSFIEAERLDGDNKYKCDKCRQLVPAIKQTTIWDDPNVLVLHLKR 197
Query: 127 FN--YLCLKISCAVQVPLYLEFGKFMHCRR------------NLVSAVIHHGSSSFSGHY 172
F+ L KI+ Q LE + L ++H G+S SGHY
Sbjct: 198 FDGGSLLGKITRHQQ---ELELAETGGDDAGADGGGGHSSIYTLTGVLVHQGASLHSGHY 254
Query: 173 NCIGSTSSGSYHYFGDDRVQASNLQQVT--NAYVVIY 207
S G + D V ++L+QV AY++ Y
Sbjct: 255 YAFVRDSHGGWSCMNDSHVYGTSLEQVRQEQAYLLFY 291
>gi|413938346|gb|AFW72897.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 531
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 96/246 (39%), Gaps = 52/246 (21%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN------- 64
SGS I P + L+ ++ F + ED+HEFL L++ +H L S S
Sbjct: 54 SGSVIAPTKFRDSLRKLSLDFTPGQQEDAHEFLRCLLDNLHECTLDPKSKSKGSSFEEES 113
Query: 65 -----------------------------LELSLDIYQLSSLDEALGQFFAKEYLVRD-- 93
L+LSL+I Q+ L +AL Q F K V D
Sbjct: 114 IVKEIFGGQLKSHLSCCECGHSSETFEPFLDLSLEIDQVDHLVDAL-QSFTKVEQVGDSE 172
Query: 94 NLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL---CLKISCAVQVPLYLEFGKF- 149
N CE C + KQ ++ + P V LKRF L KI V PL ++ F
Sbjct: 173 NKLTCESCNARVCKNKQLTLYRAPDVIAFHLKRFTTLDNSVKKIDKYVAYPLEVDLKPFH 232
Query: 150 ------MHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN-- 201
+ +L V H G ++ GHY C +S +++ D V + N
Sbjct: 233 SNPETVGELKYDLYGVVEHSGLPNY-GHYVCTIRSSPSTWYLMNDSNVDSITDSSALNQE 291
Query: 202 AYVVIY 207
AY++ Y
Sbjct: 292 AYILFY 297
>gi|340375672|ref|XP_003386358.1| PREDICTED: hypothetical protein LOC100638851 [Amphimedon
queenslandica]
Length = 1002
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 14/146 (9%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL---CL 132
+L + F A+E L+++N +C KCG +K+ ++K P FIL LKRF++ +
Sbjct: 849 TLSDCFRLFAAEEKLIKENRPRCSKCGTLQNFSKKLEVQKFPESFILHLKRFSFQDGHLV 908
Query: 133 KISCAVQVPLYLEFGKFMHCRRNLVS------AVIHHGSSSFSGHYNCIGSTSSGSYHYF 186
K++ AV+VP L + + + S VIHH GHY +G ++ F
Sbjct: 909 KLTSAVKVPTTLSVKEIAADKESAKSFYYELYGVIHHSGYLDGGHYQA-DCKHNGKWYNF 967
Query: 187 GDDRVQASNLQQVT----NAYVVIYE 208
DD V + ++T + Y++ YE
Sbjct: 968 NDDIVSKKSTAEITVPSSSPYLLFYE 993
>gi|13529590|gb|AAH05506.1| Usp33 protein, partial [Mus musculus]
Length = 956
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCL 132
+L + L FFA++ L DN+Y CEKC K ++K P + + LKRF +
Sbjct: 582 TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFST 641
Query: 133 KISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
KIS V PL L+ F+ +L+S + HHG++S SGHY + +
Sbjct: 642 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS-SGHYIAYCRNNLNNLW 700
Query: 185 YFGDDR----VQASNLQQVTNAYVVIY 207
Y DD+ V S +Q AYV+ Y
Sbjct: 701 YEFDDQSVTEVSESTVQN-AEAYVLFY 726
>gi|374106004|gb|AEY94914.1| FABL145Wp [Ashbya gossypii FDAG1]
Length = 749
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 20/180 (11%)
Query: 76 SLDEALGQFFAKEYLVR-DNL--YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY--- 129
S+++++ FF E + + DN Y CEKC T A K+ I + P ++ LK+F +
Sbjct: 547 SIEKSIRDFFNPELIKKVDNKEGYVCEKCKATTNAIKRNMILRAPETLLVHLKKFRFNGT 606
Query: 130 LCLKISCAVQVPLYL-------EFGKFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGS 182
K+ AV PL++ E K + + L+S V+H G S SGHY G+
Sbjct: 607 SSSKMKQAVSYPLFMDLTEYCVEAAKCLPVKYQLISVVVHEGRSLSSGHYIAHCKQPDGT 666
Query: 183 YHYFGDD---RVQASNLQQVTNAYVVIY-ELLPSSL---HHLNSSLHSSSPGSVEPRTHH 235
+ + D+ ++ N+ + NAY ++Y L P S+ ++S H S R H
Sbjct: 667 WATYDDEYINKITERNVLKEVNAYYLVYTRLTPKSVKLTEKMDSHAHDLKNSSAAARATH 726
>gi|296208309|ref|XP_002751018.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Callithrix
jacchus]
Length = 1035
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCL 132
+L + L FFA++ L DN+Y CEKC K ++K P + + LKRF +
Sbjct: 661 TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFST 720
Query: 133 KISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
KIS V PL L+ F+ +L+S + HHG++S SGHY + +
Sbjct: 721 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS-SGHYIAYCRNNLNNLW 779
Query: 185 YFGDDR----VQASNLQQVTNAYVVIY 207
Y DD+ V S +Q AYV+ Y
Sbjct: 780 YEFDDQSVTEVSESTVQN-AEAYVLFY 805
>gi|195054050|ref|XP_001993939.1| GH22304 [Drosophila grimshawi]
gi|193895809|gb|EDV94675.1| GH22304 [Drosophila grimshawi]
Length = 432
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/162 (30%), Positives = 76/162 (46%), Gaps = 12/162 (7%)
Query: 63 NNLELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFIL 122
N +L +D+ Q +S+ L F E L DN ++C+ C EA K+ ++K P++ L
Sbjct: 257 NFFDLQVDVDQNTSITHCLRCFSNTETLCSDNKFKCDNCCSYQEAQKRMRVKKLPMILAL 316
Query: 123 LLKRFNYLC-----LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGH 171
LKRF Y+ +K+S V PL L ++ R +L + VIH GS GH
Sbjct: 317 HLKRFKYMEQFNRHIKVSHRVVFPLELRLFNTSDDAVNPDRLYDLTAVVIHCGSGPNRGH 376
Query: 172 YNCIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
Y I S G + F DD V + + Y + ++ SS
Sbjct: 377 YISI-VKSHGLWLLFDDDMVDKIEASTIEDFYGLTSDIHKSS 417
>gi|427785435|gb|JAA58169.1| Putative ubiquitin carboxyl-terminal hydrolase 20 [Rhipicephalus
pulchellus]
Length = 834
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/146 (32%), Positives = 71/146 (48%), Gaps = 15/146 (10%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL--- 132
+L + L FF+ + L DN+Y C+KC K + + P V + LKRF + +
Sbjct: 448 ALQDCLAAFFSADELKGDNMYSCDKCCKLRNGIKYSRVLQLPEVLCIHLKRFRHEVMFSS 507
Query: 133 KISCAVQVPLY-LEFGKFMH--CRR-----NLVSAVIHHGSSSFSGHYNCIGSTS-SGSY 183
KIS V PL L+ F+H C R +L++ + HHG++ F GHY + +
Sbjct: 508 KISSYVSFPLEGLDMAPFLHSECPRSATTYDLMAVICHHGTAGF-GHYTTYALNHLNDQW 566
Query: 184 HYFGDDRVQASNLQQVTN--AYVVIY 207
+ F D V + Q V N AYV+ Y
Sbjct: 567 YEFDDQYVTSVEPQVVQNCEAYVLFY 592
>gi|58477257|gb|AAH89315.1| Usp33 protein, partial [Mus musculus]
Length = 954
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCL 132
+L + L FFA++ L DN+Y CEKC K ++K P + + LKRF +
Sbjct: 580 TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFST 639
Query: 133 KISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
KIS V PL L+ F+ +L+S + HHG++S SGHY + +
Sbjct: 640 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS-SGHYIAYCRNNLNNLW 698
Query: 185 YFGDDR----VQASNLQQVTNAYVVIY 207
Y DD+ V S +Q AYV+ Y
Sbjct: 699 YEFDDQSVTEVSESTVQN-AEAYVLFY 724
>gi|45185085|ref|NP_982802.1| ABL145Wp [Ashbya gossypii ATCC 10895]
gi|44980721|gb|AAS50626.1| ABL145Wp [Ashbya gossypii ATCC 10895]
Length = 749
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 51/180 (28%), Positives = 84/180 (46%), Gaps = 20/180 (11%)
Query: 76 SLDEALGQFFAKEYLVR-DNL--YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY--- 129
S+++++ FF E + + DN Y CEKC T A K+ I + P ++ LK+F +
Sbjct: 547 SIEKSIRDFFNPELIKKVDNKEGYVCEKCKATTNAIKRNMILRAPETLLVHLKKFRFNGT 606
Query: 130 LCLKISCAVQVPLYL-------EFGKFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGS 182
K+ AV PL++ E K + + L+S V+H G S SGHY G+
Sbjct: 607 SSSKMKQAVSYPLFMDLTEYCVEAAKCLPVKYQLISVVVHEGRSLSSGHYIAHCKQPDGT 666
Query: 183 YHYFGDD---RVQASNLQQVTNAYVVIY-ELLPSSL---HHLNSSLHSSSPGSVEPRTHH 235
+ + D+ ++ N+ + NAY ++Y L P S+ ++S H S R H
Sbjct: 667 WATYDDEYINKITERNVLKEVNAYYLVYTRLTPKSVKLTEKMDSHAHDLKNSSAAARATH 726
>gi|326527689|dbj|BAK08119.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 366
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/174 (29%), Positives = 81/174 (46%), Gaps = 29/174 (16%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LSLDI Q SS+ L F + E L ++ + C+KC EA K+ I+K P + ++ L
Sbjct: 196 LDLSLDIEQNSSITSCLKNFSSTETLNAEDKFFCDKCCSLQEAQKRMKIKKQPNILVIHL 255
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y+ K++ V PL L K M+ N L + ++H GS GHY
Sbjct: 256 KRFKYIEQLGRYKKLTYRVVFPLEL---KLMNTVDNSDLEYSLFAVLVHVGSGPNHGHYI 312
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQV--------------TNAYVVIYELLPSS 213
+ S + +F D+ V+ ++ V N Y++ YE L +
Sbjct: 313 SV-VKSHNHWLFFDDETVEMTDESMVQTFFGSAQEFSGNTDNGYILFYESLAKT 365
>gi|320586987|gb|EFW99650.1| ubiquitin c-terminal hydrolase [Grosmannia clavigera kw1407]
Length = 800
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/165 (27%), Positives = 76/165 (46%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + SS+ L +F A+E L + + C+ CG EA K+ I++ P + L L
Sbjct: 335 LDLSIDLEEHSSVTSCLRKFSAEEMLCERDKFHCDTCGGLQEAEKRMKIKRLPKILALHL 394
Query: 125 KRFNY---------LCLKISCAVQVPLYLEFGKFMHCRR--NLVSAVIHHGSSSFSGHYN 173
KRF Y L ++ Q+ ++ R L + VIH G +++ GHY
Sbjct: 395 KRFKYAENYTKLEKLFHRVVYPYQLRMFNTTDDAQDPDRLYELYAVVIHIGGNAYHGHYV 454
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
+ T + F D+ V+ + V N AYV+ Y+
Sbjct: 455 AVIKTKERGWLLFDDEMVEPVDKHYVRNFFGDKPGTACAYVLFYQ 499
>gi|328858578|gb|EGG07690.1| ubiquitin carboxyl-terminal hydrolase 12 [Melampsora
larici-populina 98AG31]
Length = 1076
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/165 (32%), Positives = 78/165 (47%), Gaps = 22/165 (13%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+DI Q +SL L QF A E L + N + C++C EA K+ I+K P V L L
Sbjct: 400 LDLSIDIEQNTSLTACLRQFSASEMLCQKNKFSCDQCCSLQEAEKRMKIKKLPNVLALHL 459
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y +K++ V P L N L + V+H G+ GHY
Sbjct: 460 KRFKYQEELQRYIKLTYRVVFPFELRLFNTTDDIPNPDRLYELWAIVVHIGTGPHHGHYV 519
Query: 174 CIGSTSSGSYHYFGDDRV---QASNLQQ-------VTNAYVVIYE 208
I SSG + F D+ V + + +Q+ V + YV+ Y+
Sbjct: 520 TI-LKSSGRWLLFDDNVVTLIEENEIQKYYGDTPGVGSGYVLFYQ 563
>gi|356510092|ref|XP_003523774.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 16-like [Glycine
max]
Length = 1063
Score = 62.4 bits (150), Expect = 2e-07, Method: Composition-based stats.
Identities = 63/247 (25%), Positives = 106/247 (42%), Gaps = 51/247 (20%)
Query: 11 ESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNNL----- 65
++ SA+ P II+ L+ I R ED+HEFL ++I+ + +S + +G N L
Sbjct: 660 DTKSAVSPMGIISHLQNIGSQLANGREEDAHEFLRHVIDTM-QSVCLMEAGVNALGSLEE 718
Query: 66 ---------------------------------ELSLDIY-QLSSLDEALGQFFAKEYLV 91
+L+++I ++++L EAL +F + E L
Sbjct: 719 DTTLMGQTFGGYLLSKIKCMRCGGKSERQERMMDLTVEIEGEITTLVEALRRFTSTETLD 778
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFM 150
+N Y C +C +A K+ ++ + P V + LKRF K++ +Q P L FM
Sbjct: 779 GENKYHCVRCKSYEKAKKKLTVSEAPNVLTVALKRFQSGKFGKLNKPIQFPEILNLAPFM 838
Query: 151 HCRRN------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--T 200
+ L V+H +++FSGHY C + D V A L +V
Sbjct: 839 SGTSDKSPIYRLYGVVVHLDIMNAAFSGHYVCYVKNIQNKWFKVDDSVVTAVELDRVLTK 898
Query: 201 NAYVVIY 207
AY++ Y
Sbjct: 899 GAYMLFY 905
>gi|299756478|ref|XP_001829362.2| ubiquitin C-terminal hydrolase [Coprinopsis cinerea okayama7#130]
gi|298411695|gb|EAU92322.2| ubiquitin C-terminal hydrolase [Coprinopsis cinerea okayama7#130]
Length = 944
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 66/143 (46%), Gaps = 22/143 (15%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+DI Q SS+ L QF A E L N + C+ C EA K+ I+K P V L L
Sbjct: 258 LDLSIDIEQNSSVTACLRQFSASEMLCNRNKFFCDACCDLQEAEKRMKIKKLPNVLALHL 317
Query: 125 KRFNY---------LCLKISCAVQVPLYLEFGKFMHCRR--NLVSAVIHHGSSSFSGHY- 172
KRF Y L +++ + + L+ R +L + V+H G+ GHY
Sbjct: 318 KRFKYQEDLGRYIKLTYRVAFPMDLRLFNTVDDMEDADRLYHLFAIVVHIGNGPHHGHYI 377
Query: 173 ----NCIGSTSSGSYHYFGDDRV 191
NC G++ F DD V
Sbjct: 378 SIIKNC------GTWFVFDDDNV 394
>gi|56758386|gb|AAW27333.1| SJCHGC05977 protein [Schistosoma japonicum]
Length = 412
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 64/240 (26%), Positives = 95/240 (39%), Gaps = 66/240 (27%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIH------------------------- 52
P+ I KLK F+ Y +D+HEFL YL+ I
Sbjct: 104 PKKFIQKLKRENGLFDNYLQQDAHEFLNYLLNKIADIIRAEQQSTEVEGEDDSNDSEVTD 163
Query: 53 ----------RSYL-KVISGS------------------NNLELSLDIYQLSSLDEALGQ 83
R+++ ++ GS N L+LS+D+ + + L
Sbjct: 164 VSENMKKHNGRNWIHEIFQGSLTNETRCLNCDNVRTKEENFLDLSVDVGENVDISYCLRC 223
Query: 84 FFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY-----LCLKISCAV 138
F E + DN Y CE C K EA ++ I+KPP++ L LKRF Y +K+S V
Sbjct: 224 FSETETMRSDNKYYCEFCRCKQEAQRRMRIKKPPLLLALHLKRFKYSENLNRFIKLSYRV 283
Query: 139 QVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQ 192
P+ L N L++ V+H GS GHY + S G + F D+ V+
Sbjct: 284 AFPMELRLFNTSSDSSNADRLYSLMAVVVHSGSGPNRGHYITL-VKSHGLWFLFDDELVE 342
>gi|148679977|gb|EDL11924.1| ubiquitin specific peptidase 33, isoform CRA_b [Mus musculus]
Length = 909
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCL 132
+L + L FFA++ L DN+Y CEKC K ++K P + + LKRF +
Sbjct: 535 TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFST 594
Query: 133 KISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
KIS V PL L+ F+ +L+S + HHG++S SGHY + +
Sbjct: 595 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS-SGHYIAYCRNNLNNLW 653
Query: 185 YFGDDR----VQASNLQQVTNAYVVIY 207
Y DD+ V S +Q AYV+ Y
Sbjct: 654 YEFDDQSVTEVSESTVQN-AEAYVLFY 679
>gi|367052119|ref|XP_003656438.1| hypothetical protein THITE_2121057 [Thielavia terrestris NRRL 8126]
gi|347003703|gb|AEO70102.1| hypothetical protein THITE_2121057 [Thielavia terrestris NRRL 8126]
Length = 692
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 49/165 (29%), Positives = 75/165 (45%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ + SS+ L QF A+E L N + C+ CG EA K+ ++K P V L L
Sbjct: 172 LDLSIDLEEHSSVTACLQQFSAEEMLCERNKFHCDHCGGLQEAEKRMKVKKLPKVLALHL 231
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G +++ GHY
Sbjct: 232 KRFKYTEDYSRLQKLFHRVVYPYHLRLFNTTDDAEDPDRMYELYAVVVHIGGNAYHGHYV 291
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
+ T + F D+ V+ + V N AYV+ Y+
Sbjct: 292 AVIKTKDRGWLLFDDEMVEPVDKSFVQNFFGDKPGMACAYVLFYQ 336
>gi|344278786|ref|XP_003411173.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33-like [Loxodonta
africana]
Length = 1108
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCL 132
+L + L FFA++ L DN+Y CEKC K ++K P + + LKRF +
Sbjct: 734 TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFST 793
Query: 133 KISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
KIS V PL L+ F+ +L+S + HHG++S SGHY + +
Sbjct: 794 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS-SGHYIAYCRNNLNNLW 852
Query: 185 YFGDDR----VQASNLQQVTNAYVVIY 207
Y DD+ V S +Q AYV+ Y
Sbjct: 853 YEFDDQSVTEVSESTVQN-AEAYVLFY 878
>gi|148679976|gb|EDL11923.1| ubiquitin specific peptidase 33, isoform CRA_a [Mus musculus]
Length = 901
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCL 132
+L + L FFA++ L DN+Y CEKC K ++K P + + LKRF +
Sbjct: 527 TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFST 586
Query: 133 KISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
KIS V PL L+ F+ +L+S + HHG++S SGHY + +
Sbjct: 587 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS-SGHYIAYCRNNLNNLW 645
Query: 185 YFGDDR----VQASNLQQVTNAYVVIY 207
Y DD+ V S +Q AYV+ Y
Sbjct: 646 YEFDDQSVTEVSESTVQN-AEAYVLFY 671
>gi|116008150|ref|NP_573510.2| ubiquitin carboxyl-terminal hydrolase 33 isoform 1 [Mus musculus]
gi|281312489|sp|Q8R5K2.2|UBP33_MOUSE RecName: Full=Ubiquitin carboxyl-terminal hydrolase 33; AltName:
Full=Deubiquitinating enzyme 33; AltName: Full=Ubiquitin
thioesterase 33; AltName:
Full=Ubiquitin-specific-processing protease 33; AltName:
Full=VHL-interacting deubiquitinating enzyme 1
gi|148921994|gb|AAI46303.1| Ubiquitin specific peptidase 33 [synthetic construct]
gi|151556748|gb|AAI48746.1| Ubiquitin specific peptidase 33 [synthetic construct]
Length = 909
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCL 132
+L + L FFA++ L DN+Y CEKC K ++K P + + LKRF +
Sbjct: 535 TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFST 594
Query: 133 KISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
KIS V PL L+ F+ +L+S + HHG++S SGHY + +
Sbjct: 595 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS-SGHYIAYCRNNLNNLW 653
Query: 185 YFGDDR----VQASNLQQVTNAYVVIY 207
Y DD+ V S +Q AYV+ Y
Sbjct: 654 YEFDDQSVTEVSESTVQN-AEAYVLFY 679
>gi|453085849|gb|EMF13892.1| cysteine proteinase [Mycosphaerella populorum SO2202]
Length = 809
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/198 (27%), Positives = 82/198 (41%), Gaps = 36/198 (18%)
Query: 47 LIEGIHRSYLKVISGSNN-------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCE 99
L EG+ S + ++ N L+LS+D+ SS+ L +F +E L N + C+
Sbjct: 288 LFEGLLTSETRCLTCENTSQRDEAFLDLSVDLDAHSSVTSCLRKFSEEEMLCERNKFHCD 347
Query: 100 KCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQVPLYLEFGKFMHCRR 154
CG EA K+ I++ P + L LKRF Y K+ V P YL
Sbjct: 348 NCGGLQEAEKRMKIKRLPRILALHLKRFKYTEDLQRLQKLFHRVVYPFYLRLFNTTDDAE 407
Query: 155 N------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQ---------------- 192
+ L S V+H G + GHY I T + F D+ V+
Sbjct: 408 DSDRLYELYSVVVHIGGGPYHGHYVSIVKTEDRGWLLFDDELVEPVSKDYVQQFFGGEPV 467
Query: 193 --ASNLQQVTNAYVVIYE 208
A + +Q+ AYV+ Y+
Sbjct: 468 PGAQDAKQLACAYVLFYQ 485
>gi|452822703|gb|EME29720.1| ubiquitin carboxyl-terminal hydrolase 12/46 [Galdieria sulphuraria]
Length = 444
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/185 (29%), Positives = 84/185 (45%), Gaps = 19/185 (10%)
Query: 47 LIEGIHRSYLKVISGSNN-------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCE 99
L EG+ + ++ +S N +LS+DI Q SS+ L F + E L + + + C+
Sbjct: 245 LFEGLLTNEVRCLSCENVTQRVESFFDLSVDIDQNSSITSCLRNFCSTELLTKHDKFFCD 304
Query: 100 KCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQVPLYLEFGKFMHCRR 154
C EA + I+K P + L LKRF ++ K+S V PL L
Sbjct: 305 ACCSLQEAERSVRIKKLPYILALHLKRFKFMEQYQRYKKLSYRVVFPLQLRLFNVSEDAE 364
Query: 155 N------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYE 208
+ LV+ VIH GS GHY C+ S G + F D+ V+ + + + +E
Sbjct: 365 DPDRLYSLVAVVIHVGSGPNHGHYVCL-IKSYGRWILFDDECVELKDENDLEAVFGSSFE 423
Query: 209 LLPSS 213
+ PSS
Sbjct: 424 MGPSS 428
>gi|18698437|gb|AAL78316.1|AF383174_1 pVHL-interacting deubiquitinating enzyme 1 [Mus musculus]
Length = 909
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCL 132
+L + L FFA++ L DN+Y CEKC K ++K P + + LKRF +
Sbjct: 535 TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFST 594
Query: 133 KISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
KIS V PL L+ F+ +L+S + HHG++S SGHY + +
Sbjct: 595 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS-SGHYIAYCRNNLNNLW 653
Query: 185 YFGDDR----VQASNLQQVTNAYVVIY 207
Y DD+ V S +Q AYV+ Y
Sbjct: 654 YEFDDQSVTEVSESTVQN-AEAYVLFY 679
>gi|295661127|ref|XP_002791119.1| ubiquitin carboxyl-terminal hydrolase [Paracoccidioides sp.
'lutzii' Pb01]
gi|226281046|gb|EEH36612.1| ubiquitin carboxyl-terminal hydrolase [Paracoccidioides sp.
'lutzii' Pb01]
Length = 793
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/165 (29%), Positives = 73/165 (44%), Gaps = 21/165 (12%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q SS+ L +F +E L N + C+ CG EA K+ I++ P + L L
Sbjct: 269 LDLSVDLDQHSSVTSCLRKFSEEEMLCERNKFHCDNCGGLQEAEKRMKIKRLPRILALHL 328
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y K+ V P +L + L + V+H G + GHY
Sbjct: 329 KRFKYTEDLQRLQKLFHRVVYPYFLRLFNTTDDAEDPDRLYELYAVVVHIGGGPYHGHYV 388
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTN----------AYVVIYE 208
I T + + F D+ V+ + V N AYV+ Y+
Sbjct: 389 AIIKTENMGWLLFDDEMVEPVDKNYVRNFFGDRPGLACAYVLFYQ 433
>gi|357197190|ref|NP_001239415.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 3 [Mus musculus]
Length = 901
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCL 132
+L + L FFA++ L DN+Y CEKC K ++K P + + LKRF +
Sbjct: 527 TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFST 586
Query: 133 KISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
KIS V PL L+ F+ +L+S + HHG++S SGHY + +
Sbjct: 587 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS-SGHYIAYCRNNLNNLW 645
Query: 185 YFGDDR----VQASNLQQVTNAYVVIY 207
Y DD+ V S +Q AYV+ Y
Sbjct: 646 YEFDDQSVTEVSESTVQN-AEAYVLFY 671
>gi|449541532|gb|EMD32515.1| hypothetical protein CERSUDRAFT_87833 [Ceriporiopsis subvermispora
B]
Length = 898
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 54/186 (29%), Positives = 82/186 (44%), Gaps = 21/186 (11%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+DI Q SS+ L QF A E L + N + C+ C EA K+ I+K P V L L
Sbjct: 282 LDLSIDIEQNSSVTACLRQFSASEMLCQKNKFFCDFCCDLQEAEKRMKIKKLPNVLALHL 341
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y +K++ V PL L + + L + V+H G+ GHY
Sbjct: 342 KRFKYQEDLGKYIKLAYRVAFPLQLRLFNTVDDAEDPDRLYELFAIVVHIGNGPHHGHYV 401
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVT---------NAYVVIYELLPSSLHHLNSSLHSS 224
I + G + F DD V+ + +AYV+ Y+ + + L
Sbjct: 402 TI-IKARGIWMLFDDDNVETIKESDIPRYFGDSSSGSAYVLYYQAVDLDMAALGLRAPEP 460
Query: 225 SPGSVE 230
+P + +
Sbjct: 461 APSTTD 466
>gi|410967706|ref|XP_003990358.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Felis catus]
Length = 1042
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCL 132
+L + L FFA++ L DN+Y CEKC K ++K P + + LKRF +
Sbjct: 668 TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFST 727
Query: 133 KISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
KIS V PL L+ F+ +L+S + HHG++S SGHY + +
Sbjct: 728 KISTHVSFPLEGLDLQPFLAKDSPVQIVTYDLLSVICHHGTAS-SGHYIAYCRNNLNNLW 786
Query: 185 YFGDDR----VQASNLQQVTNAYVVIY 207
Y DD+ V S +Q AYV+ Y
Sbjct: 787 YEFDDQSVTEVSESTVQN-AEAYVLFY 812
>gi|302759609|ref|XP_002963227.1| hypothetical protein SELMODRAFT_438411 [Selaginella moellendorffii]
gi|300168495|gb|EFJ35098.1| hypothetical protein SELMODRAFT_438411 [Selaginella moellendorffii]
Length = 364
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 73/154 (47%), Gaps = 17/154 (11%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LSLDI Q SS+ L F + E L+ D+ + C+KC EA K+ I+ P + L L
Sbjct: 189 LDLSLDIEQNSSVTSCLRNFSSTETLIADDKFFCDKCCSLQEAQKRMKIKTQPRILALHL 248
Query: 125 KRFNYL-----CLKISCAVQVPLYL------EFGKFMHCRRNLVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L E +L + V+H GS GHY
Sbjct: 249 KRFKYMEQLGRYKKLSYRVVFPLELKLCNTAEDAPGSESEYSLFAVVVHVGSGPNHGHY- 307
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIY 207
+ S ++ F DD N++ + +YV +
Sbjct: 308 -VSLVKSHNHWLFFDDE----NVEMIDESYVQTF 336
>gi|302785516|ref|XP_002974529.1| hypothetical protein SELMODRAFT_414775 [Selaginella moellendorffii]
gi|300157424|gb|EFJ24049.1| hypothetical protein SELMODRAFT_414775 [Selaginella moellendorffii]
Length = 364
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 73/154 (47%), Gaps = 17/154 (11%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LSLDI Q SS+ L F + E L+ D+ + C+KC EA K+ I+ P + L L
Sbjct: 189 LDLSLDIEQNSSVTSCLRNFSSTETLIADDKFFCDKCCSLQEAQKRMKIKTQPRILALHL 248
Query: 125 KRFNYL-----CLKISCAVQVPLYL------EFGKFMHCRRNLVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L E +L + V+H GS GHY
Sbjct: 249 KRFKYMEQLGRYKKLSYRVVFPLELKLCNTAEDAPGSESEYSLFAVVVHVGSGPNHGHY- 307
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIY 207
+ S ++ F DD N++ + +YV +
Sbjct: 308 -VSLVKSHNHWLFFDDE----NVEMIDESYVQTF 336
>gi|344237481|gb|EGV93584.1| Ubiquitin carboxyl-terminal hydrolase 33 [Cricetulus griseus]
Length = 910
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCL 132
+L + L FFA++ L DN+Y CEKC K ++K P + + LKRF +
Sbjct: 536 TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFST 595
Query: 133 KISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
KIS V PL L+ F+ +L+S + HHG++S SGHY + +
Sbjct: 596 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS-SGHYIAYCRNNLNNLW 654
Query: 185 YFGDDR----VQASNLQQVTNAYVVIY 207
Y DD+ V S +Q AYV+ Y
Sbjct: 655 YEFDDQSVTEVSESTVQN-AEAYVLFY 680
>gi|147816255|emb|CAN77546.1| hypothetical protein VITISV_025214 [Vitis vinifera]
Length = 1043
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/198 (26%), Positives = 89/198 (44%), Gaps = 35/198 (17%)
Query: 65 LELSLDI-YQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILL 123
++L+++I + +L+EAL QF A E L +N YQC +C +A K+ + + P + ++
Sbjct: 487 MDLTVEIDGDIGTLEEALAQFTATEILDGENKYQCGRCRSYEKAKKKLMVLEAPNILTIV 546
Query: 124 LKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHG--SSSFSGHYNC 174
LKRF K++ +V+ P L +M + L + V+H +++FSGHY C
Sbjct: 547 LKRFQSSNFGKLNKSVRFPETLNXTPYMSGTDDRYPVYSLYAVVVHLDIMNAAFSGHYVC 606
Query: 175 IGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY-----------------------EL 209
G + D V L +V AY+++Y E
Sbjct: 607 FVKNFLGDWFRIDDSTVTPVELDRVLLEGAYMLLYASPLALSRNMAVSHEGKLKMRNLEA 666
Query: 210 LPSSLHHLNSSLHSSSPG 227
+PSSL +S+ PG
Sbjct: 667 VPSSLAATKPRSNSAVPG 684
>gi|74180673|dbj|BAE25565.1| unnamed protein product [Mus musculus]
Length = 880
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCL 132
+L + L FFA++ L DN+Y CEKC K ++K P + + LKRF +
Sbjct: 535 TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFST 594
Query: 133 KISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
KIS V PL L+ F+ +L+S + HHG++S SGHY + +
Sbjct: 595 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS-SGHYIAYCRNNLNNLW 653
Query: 185 YFGDDR----VQASNLQQVTNAYVVIY 207
Y DD+ V S +Q AYV+ Y
Sbjct: 654 YEFDDQSVTEVSESTVQN-AEAYVLFY 679
>gi|402912939|ref|XP_003918993.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 17-like protein
2-like, partial [Papio anubis]
Length = 340
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 52/197 (26%), Positives = 87/197 (44%), Gaps = 42/197 (21%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEF +++++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFPMFIVDAMKKACLPGHKQVDHDSEDTTLIHQIFG 198
Query: 50 GIHRSYLKVI--SGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K + G ++ L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GCWRSQIKCLHCQGVSDTFDPYLDIALDIQAAQSVKQALEQVVKPEELNGENAYHCGLCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
K A+K F++ V IL+LKRF+ + K++ VQ P L+ +M +
Sbjct: 259 QKAPASKTFTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDIQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHY 172
L + ++H G S +GHY
Sbjct: 319 LYAVLVHAGWSCHNGHY 335
>gi|390604838|gb|EIN14229.1| cysteine proteinase, partial [Punctularia strigosozonata HHB-11173
SS5]
Length = 421
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 67/142 (47%), Gaps = 15/142 (10%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+DI Q SS+ L QF A E L + N + C+ C EA K+ I++ P V L L
Sbjct: 254 LDLSVDIEQNSSITACLRQFSASEMLCQRNKFFCDSCCDLQEAEKRMKIKRLPNVLALHL 313
Query: 125 KRFNY-----LCLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y +K++ V PL L + ++ L + V+H G+ GHY
Sbjct: 314 KRFKYQEDVGRYIKLAYRVAFPLELRLFNTVDDAQDPDRLYKLFAIVVHIGNGPHHGHYI 373
Query: 174 CI----GSTSSGSYHYFGDDRV 191
I + G + F DD V
Sbjct: 374 TIVKAANPNAPGQWLVFDDDNV 395
>gi|363737872|ref|XP_413755.3| PREDICTED: ubiquitin carboxyl-terminal hydrolase 3 [Gallus gallus]
Length = 520
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 80/287 (27%), Positives = 117/287 (40%), Gaps = 82/287 (28%)
Query: 2 RKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE-----------G 50
RKTL A S +A PE + + I +F Y+ +D+HEF+ YL++ G
Sbjct: 223 RKTLCALWQGSQTAFSPESLFYVVWKIMPNFRGYQQQDAHEFMRYLLDHLHLELQGGFNG 282
Query: 51 IHRSYL------------KVISGSNN-----------------------------LELSL 69
+ RS + I+G++ L+LSL
Sbjct: 283 VSRSVILQENSSLTASSKCCINGASTVVTAIFGGILQNEVNCLICGTESRKFDPFLDLSL 342
Query: 70 DIYQ--------------LSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEK 115
DI + +L + L F E L LY C KC K ++TK+F I+K
Sbjct: 343 DIPSQFRNKRTKNQENGPMCTLRDCLRSFTDLEELDETELYMCHKCKKKQKSTKKFWIQK 402
Query: 116 PPIVFILLLKRFN---YLCLKISCAVQVPL-------YL---EFGKFMHCRRNLVSAVIH 162
P V L LKRF+ YL K+ V+ PL YL E C +L + V+H
Sbjct: 403 LPKVLCLHLKRFHWTAYLRNKVDTYVEFPLRGLDMKCYLLEPENSGPESCLYDLAAVVVH 462
Query: 163 HGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
HGS SGHY + G + +F D V ++ + V AY++ Y
Sbjct: 463 HGSGVGSGHYTAYAA-HEGRWFHFNDSTVTLTDEETVVKAKAYILFY 508
>gi|332222240|ref|XP_003260275.1| PREDICTED: LOW QUALITY PROTEIN: ubiquitin carboxyl-terminal
hydrolase 33 [Nomascus leucogenys]
Length = 942
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCL 132
+L + L FFA++ L DN+Y CEKC K ++K P + + LKRF +
Sbjct: 568 TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFST 627
Query: 133 KISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
KIS V PL L+ F+ +L+S + HHG++S SGHY + +
Sbjct: 628 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS-SGHYIAYCRNNLNNLW 686
Query: 185 YFGDDR----VQASNLQQVTNAYVVIY 207
Y DD+ V S +Q AYV+ Y
Sbjct: 687 YEFDDQSVTEVSESTVQN-AEAYVLFY 712
>gi|300797726|ref|NP_001178023.1| ubiquitin carboxyl-terminal hydrolase 33 [Rattus norvegicus]
Length = 897
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCL 132
+L + L FFA++ L DN+Y CEKC K ++K P + + LKRF +
Sbjct: 527 TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFST 586
Query: 133 KISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
KIS V PL L+ F+ +L+S + HHG++S SGHY + +
Sbjct: 587 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS-SGHYIAYCRNNLNNLW 645
Query: 185 YFGDDR----VQASNLQQVTNAYVVIY 207
Y DD+ V S +Q AYV+ Y
Sbjct: 646 YEFDDQSVTEVSESTVQN-AEAYVLFY 671
>gi|125817446|ref|XP_001337596.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
rerio]
gi|125817457|ref|XP_692507.2| PREDICTED: ubiquitin carboxyl-terminal hydrolase 2-like [Danio
rerio]
Length = 398
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 84/164 (51%), Gaps = 18/164 (10%)
Query: 66 ELSLDIYQLS---SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFIL 122
+LSL I + S SL++ L F ++ L + C +C + + TK+F+I+K P + +L
Sbjct: 235 DLSLPIAKTSGEVSLNDCLRLFTKEDVLDGNERPTCHRCKTRRKCTKKFTIQKFPKILVL 294
Query: 123 LLKRFNYLCL---KISCAVQVPLY-LEFGKFMHCRRNLVSAVI------HHGSSSFSGHY 172
LKRF+ + K+S V PL L+ +F N V+AV +H +S GHY
Sbjct: 295 HLKRFSECRVRTSKLSTFVNFPLKELDLREFAS--DNSVNAVYNLYAVSNHTGTSLGGHY 352
Query: 173 NC-IGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIYELLPSS 213
S +G ++ + D RV + QV ++AYV+ YE SS
Sbjct: 353 TAYCRSPCTGEWYTYNDSRVSPMSSSQVCSSDAYVLFYECATSS 396
>gi|351698851|gb|EHB01770.1| Ubiquitin carboxyl-terminal hydrolase 33 [Heterocephalus glaber]
Length = 909
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCL 132
+L + L FFA++ L DN+Y CEKC K ++K P + + LKRF +
Sbjct: 535 TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFST 594
Query: 133 KISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
KIS V PL L+ F+ +L+S + HHG++S SGHY + +
Sbjct: 595 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS-SGHYIAYCRNNLNNLW 653
Query: 185 YFGDDR----VQASNLQQVTNAYVVIY 207
Y DD+ V S +Q AYV+ Y
Sbjct: 654 YEFDDQSVTEVSESTVQN-AEAYVLFY 679
>gi|195998894|ref|XP_002109315.1| hypothetical protein TRIADDRAFT_53214 [Trichoplax adhaerens]
gi|190587439|gb|EDV27481.1| hypothetical protein TRIADDRAFT_53214 [Trichoplax adhaerens]
Length = 813
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 46/143 (32%), Positives = 67/143 (46%), Gaps = 16/143 (11%)
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF---NYLCLK 133
L++ L FF ++ L DN+Y CEKC K I P + L LKRF +Y K
Sbjct: 447 LEDCLSTFFEEDELKGDNMYNCEKCKKLRNGIKYSKITHLPEILCLHLKRFKHDSYSTSK 506
Query: 134 ISCAVQVPLY-LEFGKFMHCRR-------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
I+C+V PL LE F++ +LV+ + HHG++ GHY C Y
Sbjct: 507 INCSVNFPLTGLEMKSFLNTGHKIQSTTYDLVAIISHHGAAG-GGHYVCYALNCINHRWY 565
Query: 186 FGDDRVQASNLQQVTNAYVVIYE 208
DD N+ +V + +V+ E
Sbjct: 566 EYDD----INVTEVADEFVLSVE 584
>gi|148679978|gb|EDL11925.1| ubiquitin specific peptidase 33, isoform CRA_c [Mus musculus]
Length = 897
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCL 132
+L + L FFA++ L DN+Y CEKC K ++K P + + LKRF +
Sbjct: 527 TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFST 586
Query: 133 KISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
KIS V PL L+ F+ +L+S + HHG++S SGHY + +
Sbjct: 587 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS-SGHYIAYCRNNLNNLW 645
Query: 185 YFGDDR----VQASNLQQVTNAYVVIY 207
Y DD+ V S +Q AYV+ Y
Sbjct: 646 YEFDDQSVTEVSESTVQN-AEAYVLFY 671
>gi|116008148|ref|NP_001070144.1| ubiquitin carboxyl-terminal hydrolase 33 isoform 2 [Mus musculus]
Length = 897
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCL 132
+L + L FFA++ L DN+Y CEKC K ++K P + + LKRF +
Sbjct: 527 TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFST 586
Query: 133 KISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
KIS V PL L+ F+ +L+S + HHG++S SGHY + +
Sbjct: 587 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS-SGHYIAYCRNNLNNLW 645
Query: 185 YFGDDR----VQASNLQQVTNAYVVIY 207
Y DD+ V S +Q AYV+ Y
Sbjct: 646 YEFDDQSVTEVSESTVQN-AEAYVLFY 671
>gi|354468064|ref|XP_003496487.1| PREDICTED: ubiquitin carboxyl-terminal hydrolase 33 [Cricetulus
griseus]
Length = 898
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 48/147 (32%), Positives = 70/147 (47%), Gaps = 17/147 (11%)
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY---LCL 132
+L + L FFA++ L DN+Y CEKC K ++K P + + LKRF +
Sbjct: 528 TLQDCLAAFFARDELKGDNMYSCEKCKKLRNGVKFCKVQKFPEILCIHLKRFRHELMFST 587
Query: 133 KISCAVQVPLY-LEFGKFMH-------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
KIS V PL L+ F+ +L+S + HHG++S SGHY + +
Sbjct: 588 KISTHVSFPLEGLDLQPFLAKDSPAQIVTYDLLSVICHHGTAS-SGHYIAYCRNNLNNLW 646
Query: 185 YFGDDR----VQASNLQQVTNAYVVIY 207
Y DD+ V S +Q AYV+ Y
Sbjct: 647 YEFDDQSVTEVSESTVQN-AEAYVLFY 672
>gi|392570543|gb|EIW63715.1| cysteine proteinase [Trametes versicolor FP-101664 SS1]
Length = 923
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 47/138 (34%), Positives = 67/138 (48%), Gaps = 12/138 (8%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
++LS+DI Q SS+ L QF A E L + N + C+ C EA K+ I+K P V L L
Sbjct: 268 IDLSIDIEQNSSVTACLRQFSASEMLCQKNKFFCDSCCDLQEAEKRMKIKKLPNVLALHL 327
Query: 125 KRFNYL-----CLKISCAVQVPLYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYN 173
KRF Y +K++ V PL L + + L + V+H G+ GHY
Sbjct: 328 KRFKYQEDVGKYIKLAYRVAFPLELRLFNTVDDAEDPDRLYELYAIVVHIGTGPHHGHYV 387
Query: 174 CIGSTSSGSYHYFGDDRV 191
I + G++ F DD V
Sbjct: 388 TI-IKARGTWMLFDDDTV 404
>gi|413938345|gb|AFW72896.1| putative ubiquitin carboxyl-terminal hydrolase superfamily protein
[Zea mays]
Length = 463
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 66/246 (26%), Positives = 96/246 (39%), Gaps = 52/246 (21%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN------- 64
SGS I P + L+ ++ F + ED+HEFL L++ +H L S S
Sbjct: 54 SGSVIAPTKFRDSLRKLSLDFTPGQQEDAHEFLRCLLDNLHECTLDPKSKSKGSSFEEES 113
Query: 65 -----------------------------LELSLDIYQLSSLDEALGQFFAKEYLVRD-- 93
L+LSL+I Q+ L +AL Q F K V D
Sbjct: 114 IVKEIFGGQLKSHLSCCECGHSSETFEPFLDLSLEIDQVDHLVDAL-QSFTKVEQVGDSE 172
Query: 94 NLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL---CLKISCAVQVPLYLEFGKF- 149
N CE C + KQ ++ + P V LKRF L KI V PL ++ F
Sbjct: 173 NKLTCESCNARVCKNKQLTLYRAPDVIAFHLKRFTTLDNSVKKIDKYVAYPLEVDLKPFH 232
Query: 150 ------MHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN-- 201
+ +L V H G ++ GHY C +S +++ D V + N
Sbjct: 233 SNPETVGELKYDLYGVVEHSGLPNY-GHYVCTIRSSPSTWYLMNDSNVDSITDSSALNQE 291
Query: 202 AYVVIY 207
AY++ Y
Sbjct: 292 AYILFY 297
>gi|444317308|ref|XP_004179311.1| hypothetical protein TBLA_0B09760 [Tetrapisispora blattae CBS 6284]
gi|387512351|emb|CCH59792.1| hypothetical protein TBLA_0B09760 [Tetrapisispora blattae CBS 6284]
Length = 898
Score = 62.0 bits (149), Expect = 2e-07, Method: Composition-based stats.
Identities = 43/152 (28%), Positives = 74/152 (48%), Gaps = 17/152 (11%)
Query: 76 SLDEALGQFFAKEYLVRDNL---YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY--- 129
S+++++ FF E + D Y CEKC T ATK+ +I + P ++ LK+F +
Sbjct: 663 SIEKSIRDFFNPELIKVDKEKKGYVCEKCNKTTNATKRSTILRAPETLLIHLKKFRFNGT 722
Query: 130 LCLKISCAVQVPLYLEFGKF--------MHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSG 181
K+ AV P++L+ +F + + L+S V+H G S SGHY G
Sbjct: 723 SSSKMKQAVSYPMFLDLTEFCEAGKDSILPVKYQLLSVVVHEGRSLSSGHYIAHCKQPDG 782
Query: 182 SYHYFGDD---RVQASNLQQVTNAYVVIYELL 210
S+ + D+ ++ + + NAY ++Y L
Sbjct: 783 SWATYDDEYINKISEREMLKEPNAYYLLYTRL 814
>gi|320583354|gb|EFW97569.1| ubiquitin carboxyl-terminal hydrolase putative [Ogataea
parapolymorpha DL-1]
Length = 718
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/150 (28%), Positives = 68/150 (45%), Gaps = 15/150 (10%)
Query: 76 SLDEALGQFFAKEYLVRDNL----YQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNY-- 129
SL+ ++ FF+ E L D Y CE C T A K +IE+ P + LKRF +
Sbjct: 540 SLENSIRDFFSPELLKTDKKDKSGYTCENCKKTTNAIKISTIERAPETLTVHLKRFRFNG 599
Query: 130 -LCLKISCAVQVPLYLEFGKFMH-----CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSY 183
+K+ V P L+ ++ + L S ++H G S SGHY GS+
Sbjct: 600 SSSMKVKANVTYPETLDLSEYTTSMNSPTKYKLSSVIVHQGRSVSSGHYIAHCRQPDGSW 659
Query: 184 HYFGDD---RVQASNLQQVTNAYVVIYELL 210
+ D+ +++A + +AYV+ Y L
Sbjct: 660 ATYDDEFINKIKARDALSDESAYVLFYSRL 689
>gi|296421086|ref|XP_002840097.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295636309|emb|CAZ84288.1| unnamed protein product [Tuber melanosporum]
Length = 654
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 54/190 (28%), Positives = 81/190 (42%), Gaps = 28/190 (14%)
Query: 47 LIEGIHRSYLKVISGSNN-------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCE 99
L EG+ S K ++ N L+LS+D+ + SS+ L F A E L N + C+
Sbjct: 173 LFEGLLTSETKCLTCENVSRRDEQFLDLSIDLEKNSSVTSCLRNFSASEMLCERNKFHCD 232
Query: 100 KCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQVPLYLEFGKFMHCRR 154
CG EA K+ I++ P V L LKRF ++ K+ V P +L
Sbjct: 233 SCGGLQEAEKRMKIKRLPKVLALHLKRFKFMENLGRFEKLHYRVLYPYHLRLFNTTDDAE 292
Query: 155 N------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN------- 201
+ L + V+H G + GHY I T + F D+ V+ + V N
Sbjct: 293 DPDRLYELYAVVVHIGGGPYHGHYVAIVKTEDKGWLLFDDELVEPVDKAFVRNFFGERPG 352
Query: 202 ---AYVVIYE 208
AYV+ Y+
Sbjct: 353 MACAYVLFYQ 362
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.322 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,729,974,083
Number of Sequences: 23463169
Number of extensions: 149094726
Number of successful extensions: 364453
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 3034
Number of HSP's successfully gapped in prelim test: 2330
Number of HSP's that attempted gapping in prelim test: 355113
Number of HSP's gapped (non-prelim): 8831
length of query: 242
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 104
effective length of database: 9,121,278,045
effective search space: 948612916680
effective search space used: 948612916680
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 75 (33.5 bits)