BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13202
(242 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|B3M3M6|UBP36_DROAN Ubiquitin carboxyl-terminal hydrolase 36 OS=Drosophila ananassae
GN=Usp36 PE=3 SV=1
Length = 1091
Score = 128 bits (322), Expect = 3e-29, Method: Composition-based stats.
Identities = 95/277 (34%), Positives = 127/277 (45%), Gaps = 60/277 (21%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL A Q + SA+ P LI KLK I H R ED+HEFL +L+E + R+YL
Sbjct: 228 MAKTLQATQT-TQSAVRPFLIYTKLKQICKHMIVGRQEDAHEFLRFLVEAMERAYLMRFR 286
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + SL+EA
Sbjct: 287 NYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKSDSLEEAFE 346
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
+F++E L D Y+CE C K ATKQF +E+ PI + LKRF+ + K++ +
Sbjct: 347 GYFSREKL-EDFGYKCEGCKKKVSATKQFRLERAPITLCIQLKRFSMMGNKLTKQITFKP 405
Query: 143 YLEFGKFMHCR---------RNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ KF LVS V H G S GHY IGST +GSY+ F D V+
Sbjct: 406 RIDLSKFAARSPAASVQPLIYRLVSMVTHLGVSQHCGHYTAIGSTEAGSYYNFDDSYVRP 465
Query: 194 SNLQQV--TNAYVVIYELLPSSLHHLNSSLHSSSPGS 228
+Q V TNAY++ YEL P L +SSP +
Sbjct: 466 IAIQSVCNTNAYIMFYELDP---------LQTSSPAA 493
>sp|B4PIW8|UBP36_DROYA Ubiquitin carboxyl-terminal hydrolase 36 OS=Drosophila yakuba
GN=Usp36 PE=3 SV=1
Length = 1082
Score = 126 bits (317), Expect = 1e-28, Method: Composition-based stats.
Identities = 89/258 (34%), Positives = 122/258 (47%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL A Q+ SA+ P LI +KLK I H R ED+HEFL +L+E + R+YL
Sbjct: 225 MAKTLLATQSNQ-SAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFR 283
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + SL++A
Sbjct: 284 NYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFE 343
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ + +
Sbjct: 344 GHFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGNKLTKQISLKP 402
Query: 143 YLEFGKFMH---------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ K+ LVS V H G S GHY IGST +GSY+ F D V+
Sbjct: 403 RIDLSKYAARSPAAQAQPLTYRLVSMVTHLGVSQHCGHYTAIGSTDTGSYYNFDDSYVRP 462
Query: 194 SNLQQV--TNAYVVIYEL 209
+Q V TNAY++ YEL
Sbjct: 463 IAMQSVCNTNAYIMFYEL 480
>sp|B3NC86|UBP36_DROER Ubiquitin carboxyl-terminal hydrolase 36 OS=Drosophila erecta
GN=Usp36 PE=3 SV=1
Length = 1085
Score = 124 bits (312), Expect = 5e-28, Method: Composition-based stats.
Identities = 88/258 (34%), Positives = 121/258 (46%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL A Q+ SA+ P LI +KLK I H R ED+HEFL +L+E + R+YL
Sbjct: 225 MAKTLLATQSNQ-SAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFR 283
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + +L++A
Sbjct: 284 NYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADTLEDAFE 343
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 344 GHFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGNKLTKQISFKP 402
Query: 143 YLEFGKFMH---------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ K+ LVS V H G S GHY IGST +GSY+ F D V+
Sbjct: 403 RIDLSKYAARSPAAQAQPLTYRLVSMVTHLGVSQHCGHYTAIGSTDTGSYYNFDDSYVRP 462
Query: 194 SNLQQV--TNAYVVIYEL 209
+Q V TNAY++ YEL
Sbjct: 463 IAMQSVCNTNAYIMFYEL 480
>sp|B4QIS3|UBP36_DROSI Ubiquitin carboxyl-terminal hydrolase 36 OS=Drosophila simulans
GN=Usp36 PE=3 SV=1
Length = 988
Score = 124 bits (311), Expect = 5e-28, Method: Composition-based stats.
Identities = 87/258 (33%), Positives = 122/258 (47%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL A Q+ SA+ P LI +KLK I H R ED+HEFL +L+E + R+YL
Sbjct: 130 MAKTLLATQSNQ-SAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFR 188
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + SL++A
Sbjct: 189 NYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFE 248
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 249 GHFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGNKLTKQISFKP 307
Query: 143 YLEFGKFMH---------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ K+ LVS V H G+S GHY IGST +GS++ F D V+
Sbjct: 308 RIDLSKYAARSPAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRP 367
Query: 194 SNLQQV--TNAYVVIYEL 209
+Q V TNAY++ +EL
Sbjct: 368 ITMQNVCNTNAYIMFFEL 385
>sp|Q9VRP5|UBP36_DROME Ubiquitin carboxyl-terminal hydrolase 36 OS=Drosophila melanogaster
GN=scny PE=1 SV=2
Length = 1085
Score = 123 bits (308), Expect = 1e-27, Method: Composition-based stats.
Identities = 86/258 (33%), Positives = 122/258 (47%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL A Q+ SA+ P LI +KLK I H R ED+HEFL +L+E + R+YL
Sbjct: 224 MTKTLLATQSNQ-SAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFR 282
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + SL++A
Sbjct: 283 NYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFE 342
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 343 GHFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGNKLTKQISFKS 401
Query: 143 YLEFGKFMHCRR---------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ K+ + LVS V H G+S GHY IGST +GS++ F D V+
Sbjct: 402 RIDLSKYAARSQAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRP 461
Query: 194 SNLQQV--TNAYVVIYEL 209
+ V TNAY++ +EL
Sbjct: 462 IAMHSVCNTNAYIMFFEL 479
>sp|B4KXJ5|UBP36_DROMO Ubiquitin carboxyl-terminal hydrolase 36 OS=Drosophila mojavensis
GN=Usp36 PE=3 SV=1
Length = 1185
Score = 121 bits (304), Expect = 4e-27, Method: Composition-based stats.
Identities = 85/258 (32%), Positives = 119/258 (46%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL Q+ +A+ P LI KL+ I H R ED+HEFL +L+E + ++YL
Sbjct: 253 MAKTLQTTQSNQ-TAVRPFLIYTKLRQICKHMVVGRQEDAHEFLRFLVEAMEKAYLMRFR 311
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + +L+EA
Sbjct: 312 NYKELDQLVKETTPLSQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADTLEEAFD 371
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
+F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 372 GYFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMMGNKLTKQISFKP 430
Query: 143 YLEFGKFMH---------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ +F LVS V H G S GHY IG T SGSY+ F D V+
Sbjct: 431 RIDLSRFAARSPAASTQPLSYRLVSMVTHLGVSQHCGHYTAIGLTESGSYYNFDDSYVRP 490
Query: 194 SNLQQV--TNAYVVIYEL 209
+Q V TNAY++ YEL
Sbjct: 491 IAMQSVCNTNAYIMFYEL 508
>sp|B4LG38|UBP36_DROVI Ubiquitin carboxyl-terminal hydrolase 36 OS=Drosophila virilis
GN=Usp36 PE=3 SV=1
Length = 1214
Score = 121 bits (303), Expect = 4e-27, Method: Composition-based stats.
Identities = 85/258 (32%), Positives = 119/258 (46%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL Q+ SA+ P LI KL+ I H R ED+HEFL +L+E + ++YL
Sbjct: 246 MAKTLQTTQSNQ-SAVRPFLIYTKLRQICKHMVVGRQEDAHEFLRFLVEAMEKAYLMRFR 304
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + +L+EA
Sbjct: 305 NFKELDQLVKETTPISQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADTLEEAFD 364
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
+F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 365 GYFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMMGNKLTKQISFKP 423
Query: 143 YLEFGKFMH---------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ +F LVS V H G S GHY IG T +GSY+ F D V+
Sbjct: 424 RIDLSRFAARSPTAAAQPLSYRLVSMVTHLGVSQHCGHYTAIGLTEAGSYYNFDDSYVKP 483
Query: 194 SNLQQV--TNAYVVIYEL 209
+Q V TNAY++ YEL
Sbjct: 484 IAMQSVCNTNAYIMFYEL 501
>sp|B4MLR8|UBP36_DROWI Ubiquitin carboxyl-terminal hydrolase 36 OS=Drosophila willistoni
GN=Usp36 PE=3 SV=1
Length = 1311
Score = 120 bits (302), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 87/259 (33%), Positives = 125/259 (48%), Gaps = 52/259 (20%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M KTL + Q+ + SAI P I +KLK I H R ED+HEFL +L+E + ++YL
Sbjct: 276 MAKTLQSTQSNA-SAIRPYHIYSKLKQICKHMVIGRQEDAHEFLRFLVEAMEKAYLMRYR 334
Query: 57 ---------KVISGSNNL-------------------------ELSLDIYQLSSLDEALG 82
K + N + +L LDI + +LDEA
Sbjct: 335 NYKELDQLVKETTPLNQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKSDTLDEAFD 394
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
+F++E L D Y+CE C K ATKQFS+++ PI + LKRF+ + K++ +
Sbjct: 395 GYFSRERL-EDMGYKCEGCKKKVSATKQFSLQRAPITLCIQLKRFSMIGNKLTKQISFKP 453
Query: 143 YLEFGKF----------MHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQ 192
++ +F + LVS V H G S GHY IG T SGSY+ F D V+
Sbjct: 454 RIDLSRFAARSPTAQGQLPLTYRLVSLVTHLGVSQHCGHYTAIGLTESGSYYNFDDSYVR 513
Query: 193 ASNLQQV--TNAYVVIYEL 209
+Q V TN+Y++ YEL
Sbjct: 514 PIAMQSVCSTNSYIMFYEL 532
>sp|B4IXE0|UBP36_DROGR Ubiquitin carboxyl-terminal hydrolase 36 OS=Drosophila grimshawi
GN=Usp36 PE=3 SV=1
Length = 1240
Score = 120 bits (301), Expect = 9e-27, Method: Compositional matrix adjust.
Identities = 86/258 (33%), Positives = 124/258 (48%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M KTL + Q+ SA+ P LI +KL+ I H R ED+HEFL +LIE + ++YL
Sbjct: 256 MAKTLQSTQSNQ-SAVRPFLIYSKLRQICKHMVVGRQEDAHEFLRFLIEAMEKAYLMRFR 314
Query: 57 ---------KVISGSNNL-------------------------ELSLDIYQLSSLDEALG 82
K + N + +L LDI + +L++A
Sbjct: 315 NYKELDQLVKETTPLNQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKSDTLEDAFD 374
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
+F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 375 GYFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMMGNKLTKQISFKP 433
Query: 143 YLEFGKFMHCRRN---------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ +F LVS V H G S GHY IG T +GSY+ F D V+
Sbjct: 434 RIDLSRFAARSPTAAAQPLSYRLVSMVTHLGVSQHCGHYTAIGLTETGSYYNFDDSCVRP 493
Query: 194 SNLQQV--TNAYVVIYEL 209
+Q V TNAY++ YEL
Sbjct: 494 IAMQSVCNTNAYIMFYEL 511
>sp|Q2LZB1|UBP36_DROPS Ubiquitin carboxyl-terminal hydrolase 36 OS=Drosophila
pseudoobscura pseudoobscura GN=Usp36 PE=3 SV=2
Length = 1059
Score = 120 bits (300), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/258 (33%), Positives = 123/258 (47%), Gaps = 51/258 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M KTL + Q+ SA+ P I +KLK I H R ED+HEFL +L+E + ++YL
Sbjct: 223 MAKTLQSTQS-CQSAMRPFHIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMEKAYLMRFR 281
Query: 57 ---------KVISGSNNL-------------------------ELSLDIYQLSSLDEALG 82
K + N + +L LDI + +L+EA
Sbjct: 282 NFKELDQLVKETTPLNQIFGGYLRSEVRCLSCSHVSITFQHFQDLLLDIRKSDTLEEAFD 341
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
+F++E L D Y+CE C K ATKQFS+E+ PI + LKRF+ + K++ +
Sbjct: 342 GYFSRERL-EDMGYKCEGCKKKVSATKQFSLERAPITLCIQLKRFSMIGNKLTKTISFKP 400
Query: 143 YLEFGKFMHCRR---------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ +F LVS V H G S GHY IG T SGSY+ F D V+
Sbjct: 401 RIDLSRFAARSPAAAAQPLTYRLVSMVTHLGVSQHCGHYTAIGMTESGSYYNFDDSYVRP 460
Query: 194 SNLQQV--TNAYVVIYEL 209
+Q V TNAY++ YEL
Sbjct: 461 IAMQSVCNTNAYIMFYEL 478
>sp|Q9P275|UBP36_HUMAN Ubiquitin carboxyl-terminal hydrolase 36 OS=Homo sapiens GN=USP36
PE=1 SV=3
Length = 1121
Score = 106 bits (265), Expect = 1e-22, Method: Composition-based stats.
Identities = 86/287 (29%), Positives = 131/287 (45%), Gaps = 50/287 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHIVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGCA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDVALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KADVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMHCRR------NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQNNGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 409
Query: 199 VTN--AYVVIYELLPSSLHH----LNSSLHSSSPG--SVEPRTHHRN 237
V N AYV+ Y +P S ++ + SS PG SV P +N
Sbjct: 410 VLNQQAYVLFYLRIPGSKKSPEGLISRTGSSSLPGRPSVIPDHSKKN 456
>sp|B1AQJ2|UBP36_MOUSE Ubiquitin carboxyl-terminal hydrolase 36 OS=Mus musculus GN=Usp36
PE=2 SV=1
Length = 1098
Score = 106 bits (265), Expect = 1e-22, Method: Composition-based stats.
Identities = 78/257 (30%), Positives = 119/257 (46%), Gaps = 44/257 (17%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
M+ + A SG+AI P I LK IA HF + ED+HEFL Y I+ + ++ L
Sbjct: 170 MQNHMVQAFANSGNAIKPVSFIRDLKKIARHFRFGNQEDAHEFLRYTIDAMQKACLNGYA 229
Query: 57 -----------------------------KVISGSNN--LELSLDIYQLSSLDEALGQFF 85
K +S + + L+++L+I Q +++ AL F
Sbjct: 230 KLDRQTQATTLVHQIFGGYLRSRVKCSVCKSVSDTYDPYLDIALEIRQAANIVRALELFV 289
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYL 144
+ L +N Y C KC K A+K+F+I + V L LKRF N+ KI+ V P +L
Sbjct: 290 KSDVLSGENAYMCAKCKKKVPASKRFTIHRTSNVLTLSLKRFANFSGGKITKDVGYPEFL 349
Query: 145 EFGKFMH------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQ 198
+M L + ++H G S +GHY C S+G ++ D V +SN++
Sbjct: 350 NIRPYMSQSSGDPVMYGLYAVLVHSGYSCHAGHYYCYVKASNGQWYQMNDSLVHSSNVKV 409
Query: 199 VTN--AYVVIYELLPSS 213
V N AYV+ Y +P S
Sbjct: 410 VLNQQAYVLFYLRIPGS 426
>sp|O74442|UBP16_SCHPO Probable ubiquitin carboxyl-terminal hydrolase 16
OS=Schizosaccharomyces pombe (strain 972 / ATCC 24843)
GN=ubp16 PE=1 SV=1
Length = 457
Score = 103 bits (258), Expect = 8e-22, Method: Compositional matrix adjust.
Identities = 79/257 (30%), Positives = 120/257 (46%), Gaps = 48/257 (18%)
Query: 10 AESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL------------- 56
+ SA P I + LK+I+ HF YR ED+HEF+ YL++ +S L
Sbjct: 185 TKRASAFKPSGIQSMLKVISSHFRPYRQEDAHEFMRYLVDAWQKSCLQNHKNLDHPSRET 244
Query: 57 ----KVISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVRDN 94
++ G SN L+LS+D + SSL ++L F E L + N
Sbjct: 245 SVVHRIFGGYLRQQILCSVCKKPSNTYQALLDLSVDA-KGSSLADSLKHFVHAEKLTKQN 303
Query: 95 LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL---KISCAVQVPLYLEFGKFM- 150
Y+CE C +A+KQ +I + P + + KRF + KIS + P G +M
Sbjct: 304 KYRCENCKQLVDASKQMTIYRAPNILTIHFKRFTFNGFQSSKISKQISYPESFNLGPYMS 363
Query: 151 ----HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQVTN--AYV 204
C L+ ++H G S+ SGHY +S+G + F DD V S++ +V N AY+
Sbjct: 364 DPNCSCWYELIGVLVHAGGSTRSGHYYSFCKSSNGVWLKFDDDFVSNSSIDRVLNQQAYI 423
Query: 205 VIYEL--LPSSLHHLNS 219
+ Y+ SS H LN+
Sbjct: 424 LQYKRKSTSSSKHKLNT 440
>sp|E1B9W9|UBP42_BOVIN Ubiquitin carboxyl-terminal hydrolase 42 OS=Bos taurus GN=USP42
PE=3 SV=1
Length = 1333
Score = 102 bits (253), Expect = 4e-21, Method: Composition-based stats.
Identities = 78/280 (27%), Positives = 128/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + HS+ SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHSAHSPGQSSPR 434
>sp|B2RQC2|UBP42_MOUSE Ubiquitin carboxyl-terminal hydrolase 42 OS=Mus musculus GN=Usp42
PE=2 SV=1
Length = 1324
Score = 101 bits (252), Expect = 4e-21, Method: Composition-based stats.
Identities = 78/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 158 MQTHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 214
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+ +AL
Sbjct: 215 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALE 274
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V + LKRF N+ KI+ V+ P
Sbjct: 275 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYP 334
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 335 EYLDIRPYMSQPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 394
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V N AYV+ Y + + + S H + SPG PR
Sbjct: 395 IRAVLNQQAYVLFY-IRSHDVKNGGESAHPAHSPGQSSPR 433
>sp|Q9FPS4|UBP23_ARATH Ubiquitin carboxyl-terminal hydrolase 23 OS=Arabidopsis thaliana
GN=UBP23 PE=2 SV=2
Length = 859
Score = 101 bits (251), Expect = 6e-21, Method: Compositional matrix adjust.
Identities = 77/255 (30%), Positives = 124/255 (48%), Gaps = 50/255 (19%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYL---- 56
++K + + +G + P+ +++ L+ I+ +F R ED+HE+++ L+E +H+ L
Sbjct: 155 IQKHVRTARQANGRILAPKDLVSNLRCISRNFRNCRQEDAHEYMINLLECMHKCSLPSGV 214
Query: 57 --------------KVISGS-------------NN-----LELSLDIYQLSSLDEALGQF 84
K+ GS +N L+LSLDI + SL AL +F
Sbjct: 215 PSESSDAYRRSLVHKIFGGSLRSQVKCEQCSHCSNKFDPFLDLSLDISKADSLQRALSRF 274
Query: 85 FAKEYLVRDN---LYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQV 140
A E L DN +YQCE+C K +A KQ ++ K P V + LKRF + KI V
Sbjct: 275 TAVELL--DNGAKVYQCERCKQKVKAKKQLTVSKAPYVLTVHLKRFEAHRSEKIDRKVDF 332
Query: 141 PLYLEFGKFM------HCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQAS 194
++ F+ + + L ++H+G SS SGHY C TSSG ++ D+RV
Sbjct: 333 TSAIDMKPFVSGPHEGNLKYTLYGVLVHYGRSSHSGHYACFVRTSSGMWYSLDDNRVVQV 392
Query: 195 NLQQVTN--AYVVIY 207
+ + V N AY++ Y
Sbjct: 393 SEKTVFNQKAYMLFY 407
>sp|D3ZU96|UBP42_RAT Ubiquitin carboxyl-terminal hydrolase 42 OS=Rattus norvegicus
GN=Usp42 PE=3 SV=1
Length = 1325
Score = 100 bits (250), Expect = 8e-21, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 158 MQTHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 214
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+ +AL
Sbjct: 215 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVTKALE 274
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V + LKRF N+ KI+ V+ P
Sbjct: 275 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTISLKRFANFTGGKIAKDVKYP 334
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 335 EYLDIRPYMSQPNGEPIIYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 394
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V N AYV+ Y + + + + H + SPG PR
Sbjct: 395 IRSVLNQQAYVLFY-IRSHDVKNGGETTHPAHSPGQSSPR 433
>sp|Q9H9J4|UBP42_HUMAN Ubiquitin carboxyl-terminal hydrolase 42 OS=Homo sapiens GN=USP42
PE=1 SV=3
Length = 1324
Score = 100 bits (249), Expect = 8e-21, Method: Composition-based stats.
Identities = 77/280 (27%), Positives = 127/280 (45%), Gaps = 52/280 (18%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M+ + + G I P +IN+++ IA HF + ED+HEFL Y ++ + ++ L +
Sbjct: 159 MQAHITQALSNPGDVIKPMFVINEMRRIARHFRFGNQEDAHEFLQYTVDAMQKACL---N 215
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
GSN L+ ++L+I S+++AL
Sbjct: 216 GSNKLDRHTQATTLVCQIFGGYLRSRVKCLNCKGVSDTFDPYLDITLEIKAAQSVNKALE 275
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVP 141
QF E L +N Y+C KC A+K+F+I + V L LKRF N+ KI+ V+ P
Sbjct: 276 QFVKPEQLDGENSYKCSKCKKMVPASKRFTIHRSSNVLTLSLKRFANFTGGKIAKDVKYP 335
Query: 142 LYLEFGKFMHCRRN------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASN 195
YL+ +M L + ++H G + +GHY C S+G ++ D V S+
Sbjct: 336 EYLDIRPYMSQPNGEPIVYVLYAVLVHTGFNCHAGHYFCYIKASNGLWYQMNDSIVSTSD 395
Query: 196 LQQVTN--AYVVIYELLPSSLHHLNSSLHSS-SPGSVEPR 232
++ V + AYV+ Y + + + H + SPG PR
Sbjct: 396 IRSVLSQQAYVLFY-IRSHDVKNGGELTHPTHSPGQSSPR 434
>sp|B4HUI5|UBP36_DROSE Ubiquitin carboxyl-terminal hydrolase 36 OS=Drosophila sechellia
GN=Usp36 PE=3 SV=1
Length = 1059
Score = 94.4 bits (233), Expect = 6e-19, Method: Composition-based stats.
Identities = 78/258 (30%), Positives = 110/258 (42%), Gaps = 70/258 (27%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
M KTL A Q+ SA+ P LI +KLK I H R ED+HEFL +L+E + R+YL
Sbjct: 220 MAKTLLATQSNQ-SAVRPFLIYSKLKQICKHMVVGRQEDAHEFLRFLVEAMERAYLMRFR 278
Query: 61 GSNNLE--------------------------------------LSLDIYQLSSLDEALG 82
L+ L LDI + SL++A
Sbjct: 279 NYKELDQLVKETTPLGQIFGGYLRSEVRCLSCNHVSITFQHFQDLLLDIRKADSLEDAFE 338
Query: 83 QFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCLKISCAVQVPL 142
F++E L D Y+CE C K LKRF+ + K++ +
Sbjct: 339 GHFSRERL-EDMGYKCEGCKKK-------------------LKRFSMIGNKLTKQISFKP 378
Query: 143 YLEFGKFMH---------CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQA 193
++ K+ LVS V H G+S GHY IGST +GS++ F D V+
Sbjct: 379 RIDLSKYAARSPAAQAQPLTYRLVSMVTHLGASQHCGHYTAIGSTDTGSFYNFDDSYVRP 438
Query: 194 SNLQQV--TNAYVVIYEL 209
+Q V TNAY++ +EL
Sbjct: 439 ITMQNVCNTNAYIMFFEL 456
>sp|Q9FPS2|UBP25_ARATH Ubiquitin carboxyl-terminal hydrolase 25 OS=Arabidopsis thaliana
GN=UBP25 PE=2 SV=1
Length = 661
Score = 86.7 bits (213), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 72/238 (30%), Positives = 104/238 (43%), Gaps = 48/238 (20%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK-------------------- 57
P I + LK+ A HF+ R ED+HEFL Y+I+ H + L+
Sbjct: 95 PNKISSCLKIFAEHFKLGRQEDAHEFLRYVIDACHNTSLRLKKLRYNGNEPFNGNSVVKE 154
Query: 58 VISG--------------SNN----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCE 99
+ G SN +++SL+I Q SS+ E+L +FF E L +N Y+CE
Sbjct: 155 IFGGALQSQVKCLSCGAESNKADEIMDISLEILQSSSVKESLQKFFQSEILDGNNKYRCE 214
Query: 100 KCGYKTEATKQFSIEKPPIVFILLLKRFNYL-CLKISCAVQVPLYLEFGKFM-------H 151
C A KQ SI + P + ++ LKRF + KI A+ L FM
Sbjct: 215 SCEKLVTARKQMSILQAPNILVIQLKRFGGIFGGKIDKAISFGEILVLSNFMSKASKDPQ 274
Query: 152 CRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L ++H G S SGHY S G ++ D V S LQ+V AY++ +
Sbjct: 275 PEYKLFGIIVHSGFSPESGHYYAYVKDSLGRWYCCNDSFVSLSTLQEVLSEKAYILFF 332
>sp|Q7M764|U17L2_MOUSE Ubiquitin carboxyl-terminal hydrolase 17 OS=Mus musculus GN=Usp17l2
PE=3 SV=2
Length = 540
Score = 80.1 bits (196), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 58/231 (25%), Positives = 102/231 (44%), Gaps = 44/231 (19%)
Query: 21 IINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGSNN---------------- 64
++ +++ F ++ ED+HEFL++ +E +H S L+V S+
Sbjct: 149 VMKPSQILTSAFHKHQQEDAHEFLMFTLETMHESCLQVHRQSDPTPQDTSPIHDIFGGWW 208
Query: 65 -------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKT 105
L++ LDI S+++AL E L+ +N Y C +C K
Sbjct: 209 RSQIKCLHCQGTSHTFDPFLDVPLDISSAQSVNQALWDTGKSEELLGENAYYCGRCRQKM 268
Query: 106 EATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRRN------LVS 158
A+K + P V +L+LKRF+ + K+ V P +L+ ++ L +
Sbjct: 269 PASKTLHVHIAPKVLLLVLKRFSAFTGNKLDRKVSYPEFLDLKPYLSEPTGGPLPYALYA 328
Query: 159 AVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
++H G++S SGHY C G ++ D +V ++ V NAYV+ Y
Sbjct: 329 VLVHDGATSNSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFY 379
>sp|Q61068|UBPW_MOUSE Ubiquitin carboxyl-terminal hydrolase DUB-1 OS=Mus musculus GN=Dub1
PE=1 SV=1
Length = 526
Score = 78.2 bits (191), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 62/240 (25%), Positives = 102/240 (42%), Gaps = 50/240 (20%)
Query: 12 SGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKV------------- 58
SG + P I+ F ++ ED+HEFL++ +E +H S L+V
Sbjct: 112 SGDVMKPSHILTSA------FHKHQQEDAHEFLMFTLETMHESCLQVHRQSKPTSEDSSP 165
Query: 59 -----------------ISGSNN-----LELSLDIYQLSSLDEALGQFFAKEYLVRDNLY 96
G+++ L++ LDI S+ +AL E L DN Y
Sbjct: 166 IHDIFGGWWRSQIKCLLCQGTSDTYDRFLDIPLDISSAQSVKQALWDTEKSEELCGDNAY 225
Query: 97 QCEKCGYKTEATKQFSIEKPPIVFILLLKRFN-YLCLKISCAVQVPLYLEFGKFMHCRRN 155
C KC K A+K + P V +++L RF+ + K+ V P +L+ ++
Sbjct: 226 YCGKCRQKMPASKTLHVHIAPKVLMVVLNRFSAFTGNKLDRKVSYPEFLDLKPYLSEPTG 285
Query: 156 ------LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G++S SGHY C G ++ D +V ++ V NAYV+ Y
Sbjct: 286 GPLPYALYAVLVHDGATSHSGHYFCCVKAGHGKWYKMDDTKVTRCDVTSVLNENAYVLFY 345
>sp|Q9SJA1|UBP19_ARATH Ubiquitin carboxyl-terminal hydrolase 19 OS=Arabidopsis thaliana
GN=UBP19 PE=2 SV=2
Length = 672
Score = 77.0 bits (188), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 71/275 (25%), Positives = 116/275 (42%), Gaps = 62/275 (22%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--------------- 62
P II++L I + Y R ED+HE + + I+ + L G
Sbjct: 238 PMNIISRLPNIGGNLGYGRQEDAHELMRFAIDMMQSVCLDEFGGEKVVPPRAQETTLIQY 297
Query: 63 -----------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQC 98
N ++L+++I+ SL+E L QF AKE+L DNLY+C
Sbjct: 298 IFGGLLQSQVQCTACSNVSDQYENMMDLTVEIHGDAVSLEECLDQFTAKEWLQGDNLYKC 357
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRR--- 154
++C +A K+ SI P + + LKRF K++ + P + G +M
Sbjct: 358 DRCDDYVKACKRLSIRCAPNILTIALKRFQGGRFGKLNKRISFPETFDLGPYMSGGGEGS 417
Query: 155 ---NLVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H ++SF GHY C G+++ D V+ L+ V AY+++Y
Sbjct: 418 DVYKLYAVIVHLDMLNASFFGHYICYVKDFRGNWYRIDDSEVEKVELEDVLSQRAYMLLY 477
Query: 208 ELL---PSSLHHLNS---------SLHSSSPGSVE 230
+ PS+L S + S+ GSVE
Sbjct: 478 SRVQPRPSNLRSEESQDEKKTDTLNTESNQDGSVE 512
>sp|C9JJH3|U17LA_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 10 OS=Homo
sapiens GN=USP17L10 PE=3 SV=1
Length = 530
Score = 75.1 bits (183), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 64/235 (27%), Positives = 102/235 (43%), Gaps = 44/235 (18%)
Query: 17 IPELIINKLKLIAHHFEYYRPEDSHEFLLYLIE--------------------------- 49
IP +I + +A F + ED+HEFL++ ++
Sbjct: 138 IPGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMRKACLPGHKQVDRHSKDTTLIHQIF 197
Query: 50 -GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKC 101
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 198 GGYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVC 257
Query: 102 GYKTEATKQFSIEKPPIVFILLLKRF-NYLCLKISCAVQVPLYLEFGKFMHCRRN----- 155
+ A+K ++ V IL+LKRF + KI+ VQ P L+ +M +
Sbjct: 258 LQRAPASKTLTLHNSAKVLILVLKRFPDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLVY 317
Query: 156 -LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY+ G ++ D V AS++ V AYV+ Y
Sbjct: 318 VLYAVLVHAGWSCHNGHYSSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>sp|D6RA61|U17LM_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 22 OS=Homo
sapiens GN=USP17L22 PE=3 SV=1
Length = 530
Score = 72.0 bits (175), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M +
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>sp|Q6QN14|U17L6_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 6 OS=Homo
sapiens GN=USP17L6 PE=1 SV=2
Length = 398
Score = 72.0 bits (175), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 101/234 (43%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M +
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>sp|Q5RBQ4|UBP46_PONAB Ubiquitin carboxyl-terminal hydrolase 46 OS=Pongo abelii GN=USP46
PE=2 SV=1
Length = 366
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 88 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 147
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 148 KLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 207
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 208 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 267
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 268 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 326
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISKNS 354
>sp|P62069|UBP46_MOUSE Ubiquitin carboxyl-terminal hydrolase 46 OS=Mus musculus GN=Usp46
PE=1 SV=1
Length = 366
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 88 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 147
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 148 KLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 207
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 208 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 267
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 268 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 326
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISKNS 354
>sp|P62068|UBP46_HUMAN Ubiquitin carboxyl-terminal hydrolase 46 OS=Homo sapiens GN=USP46
PE=1 SV=1
Length = 366
Score = 71.6 bits (174), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/268 (26%), Positives = 110/268 (41%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q + I P+ I++L+ F+ Y +D+HEFL YL+ I +
Sbjct: 88 ATQKKKVGVIPPKKFISRLRKENDLFDNYMQQDAHEFLNYLLNTIADILQEEKKQEKQNG 147
Query: 57 KVISGSNN----------------------------------------LELSLDIYQLSS 76
K+ +G+ N L+LS+D+ Q +S
Sbjct: 148 KLKNGNMNEPAENNKPELTWVHEIFQGTLTNETRCLNCETVSSKDEDFLDLSVDVEQNTS 207
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL-----C 131
+ L F E L + Y CE C K EA K+ ++K P++ L LKRF Y+
Sbjct: 208 ITHCLRDFSNTETLCSEQKYYCETCCSKQEAQKRMRVKKLPMILALHLKRFKYMEQLHRY 267
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L ++ R +LV+ V+H GS GHY I S G +
Sbjct: 268 TKLSYRVVFPLELRLFNTSSDAVNLDRMYDLVAVVVHCGSGPNRGHYITI-VKSHGFWLL 326
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 327 FDDDIVEKIDAQAIEEFYGLTSDISKNS 354
>sp|C9JVI0|U17LB_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 11 OS=Homo
sapiens GN=USP17L11 PE=3 SV=1
Length = 530
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQTNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>sp|D6R9N7|U17LI_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 18 OS=Homo
sapiens GN=USP17L18 PE=3 SV=1
Length = 530
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQTNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>sp|D6RCP7|U17LJ_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 19 OS=Homo
sapiens GN=USP17L19 PE=3 SV=1
Length = 530
Score = 71.2 bits (173), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQTNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>sp|Q67XW5|UBP18_ARATH Ubiquitin carboxyl-terminal hydrolase 18 OS=Arabidopsis thaliana
GN=UBP18 PE=2 SV=2
Length = 631
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 59/242 (24%), Positives = 106/242 (43%), Gaps = 54/242 (22%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVISGS--------------- 62
P II++L I Y R ED+HEF+ Y I+ + L G
Sbjct: 232 PMNIISRLTNIGGTLGYGRQEDAHEFMRYAIDMMQSVCLDEFGGEKIVPPRSQETTLIQY 291
Query: 63 -----------------------NNLELSLDIY-QLSSLDEALGQFFAKEYLVRDNLYQC 98
N ++L ++++ SL+E L QF A+E+L DN+Y+C
Sbjct: 292 IFGGLLQSQVQCTVCNHVSDQYENMMDLIVEMHGDAGSLEECLDQFTAEEWLHGDNMYKC 351
Query: 99 EKCGYKTEATKQFSIEKPPIVFILLLKRFN---YLCLKISCAVQVPLYLEFGKFMHCRRN 155
++C +A K+ +I + P + + LKR+ Y K++ + P L+ +M +
Sbjct: 352 DRCSDYVKACKRLTIRRAPNILTIALKRYQGGRY--GKLNKRISFPETLDLNPYMSEGGD 409
Query: 156 ------LVSAVIHHG--SSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
L + ++H ++SF GHY C G+++ D +++ L+ V AY++
Sbjct: 410 GSDVYKLYAVIVHLDMLNASFFGHYICYIKDFCGNWYRIDDSEIESVELEDVLSQRAYML 469
Query: 206 IY 207
+Y
Sbjct: 470 LY 471
>sp|D6RBQ6|U17LH_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 17 OS=Homo
sapiens GN=USP17L17 PE=3 SV=1
Length = 530
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M +
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V A+++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTAASITSVLSQQAYVLFY 372
>sp|Q9FKP5|UBP17_ARATH Ubiquitin carboxyl-terminal hydrolase 17 OS=Arabidopsis thaliana
GN=UBP17 PE=2 SV=1
Length = 731
Score = 70.9 bits (172), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 68/248 (27%), Positives = 105/248 (42%), Gaps = 49/248 (19%)
Query: 9 QAESG-SAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK---------- 57
+A G S + P I++KL+ I H + ED+HEFL ++ + +LK
Sbjct: 383 KARGGESPLSPIKILSKLQKIGKHLGPGKEEDAHEFLRCAVDTMQSVFLKEAPAAGPFAE 442
Query: 58 ---------------------VISGSNNLELSLDIY-----QLSSLDEALGQFFAKEYLV 91
+ S EL +D+ + SL+EAL QF A E L
Sbjct: 443 ETTLVGLTFGGYLHSKIKCMACLHKSERPELMMDLTVEIDGDIGSLEEALAQFTAYEVLD 502
Query: 92 RDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFM 150
+N Y C +C +A K+ I + P + ++LKRF K+S + P L+ +M
Sbjct: 503 GENRYFCGRCKSYQKAKKKLMILEGPNILTVVLKRFQSDNFGKLSKPIHFPELLDISPYM 562
Query: 151 -------HCRRNLVSAVIHHGSSS--FSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV-- 199
H +L + V+H + S FSGHY C T G + D V L+ V
Sbjct: 563 SDPNHGDHPVYSLYAVVVHLDAMSTLFSGHYVCYIKTLDGDWFKIDDSNVFPVQLETVLL 622
Query: 200 TNAYVVIY 207
AY+++Y
Sbjct: 623 EGAYMLLY 630
>sp|C9JLJ4|U17LD_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 13 OS=Homo
sapiens GN=USP17L13 PE=2 SV=1
Length = 530
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 62/234 (26%), Positives = 101/234 (43%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHPSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M +
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V A+++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTAASITSVLSQQAYVLFY 372
>sp|D6RJB6|U17LK_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 20 OS=Homo
sapiens GN=USP17L20 PE=3 SV=1
Length = 530
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>sp|Q0WX57|U17LO_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 24 OS=Homo
sapiens GN=USP17L24 PE=1 SV=2
Length = 530
Score = 70.9 bits (172), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>sp|P34547|UBPX_CAEEL Probable ubiquitin carboxyl-terminal hydrolase 46 OS=Caenorhabditis
elegans GN=usp-46 PE=3 SV=3
Length = 426
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 55/180 (30%), Positives = 85/180 (47%), Gaps = 26/180 (14%)
Query: 33 EYYRPEDSHEFLLYLIEGIHRSYLKVIS-------GSNNLELSLDIYQLSSLDEALGQFF 85
E+ D+ ++ + +GI + + +S + L+LS+D+ Q +S+ L F
Sbjct: 186 EFLNKSDTTTWIHEIFQGILTNETRCLSCETVSSKDEDFLDLSIDVEQNTSISHCLRVFS 245
Query: 86 AKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----LKISCAVQV 140
E L D Y CE C K EA K+ I+KPP + L LKRF ++ K+S V
Sbjct: 246 ETETLCGDQKYFCETCSSKQEAQKRMRIKKPPQLLALHLKRFKFVEPLNRHTKLSYRVVF 305
Query: 141 PLYL---------EFGKFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRV 191
PL L E+G M+ +LV+ V+H G++ GHY I S S+ DD +
Sbjct: 306 PLELRLFNVSDDAEYGDRMY---DLVATVVHCGATPNRGHY--ITLVKSNSFWLVFDDDI 360
Score = 35.0 bits (79), Expect = 0.52, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 25/51 (49%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLK 57
A Q I P+ I KLK F+ Y +D+HEF YLI I + ++
Sbjct: 84 ASQKRRVGTIAPKRFITKLKKENELFDNYMQQDAHEFFNYLINTISETLIQ 134
>sp|A8MUK1|U17L5_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 5 OS=Homo
sapiens GN=USP17L5 PE=2 SV=2
Length = 530
Score = 70.5 bits (171), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLAKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>sp|C9J2P7|U17LF_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 15 OS=Homo
sapiens GN=USP17L15 PE=3 SV=1
Length = 530
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI VQ P L+ +M +
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKIDKNVQYPECLDMKLYMSQTNSGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>sp|C9JPN9|UL17C_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 12 OS=Homo
sapiens GN=USP17L12 PE=3 SV=1
Length = 530
Score = 70.1 bits (170), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M
Sbjct: 259 QRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>sp|D6R901|U17LL_HUMAN Ubiquitin carboxyl-terminal hydrolase 17-like protein 21 OS=Homo
sapiens GN=USP17L21 PE=3 SV=1
Length = 530
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 63/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GYWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVQQALEQLVKPEELNGENAYHCGVCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + KI+ VQ P L+ +M
Sbjct: 259 QRAPASKMLTLLTSAKVLILVLKRFSDVTGNKIAKNVQYPECLDMQPYMSQPNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S +GHY G ++ D V AS++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHNGHYFSYVKAQEGQWYKMDDAEVTASSITSVLSQQAYVLFY 372
>sp|Q6R6M4|U17L2_HUMAN Ubiquitin carboxyl-terminal hydrolase 17 OS=Homo sapiens GN=USP17L2
PE=1 SV=2
Length = 530
Score = 69.7 bits (169), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 61/234 (26%), Positives = 100/234 (42%), Gaps = 44/234 (18%)
Query: 18 PELIINKLKLIAHHFEYYRPEDSHEFLLYLIE---------------------------- 49
P +I + +A F + ED+HEFL++ ++
Sbjct: 139 PGHVIQPSQALAAGFHRGKQEDAHEFLMFTVDAMKKACLPGHKQVDHHSKDTTLIHQIFG 198
Query: 50 GIHRSYLKV-----ISGSNN--LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCG 102
G RS +K IS + + L+++LDI S+ +AL Q E L +N Y C C
Sbjct: 199 GCWRSQIKCLHCHGISDTFDPYLDIALDIQAAQSVKQALEQLVKPEELNGENAYHCGLCL 258
Query: 103 YKTEATKQFSIEKPPIVFILLLKRFNYLCL-KISCAVQVPLYLEFGKFMHCRRN------ 155
+ A+K ++ V IL+LKRF+ + K++ VQ P L+ +M +
Sbjct: 259 QRAPASKTLTLHTSAKVLILVLKRFSDVTGNKLAKNVQYPECLDMQPYMSQQNTGPLVYV 318
Query: 156 LVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVVIY 207
L + ++H G S GHY G ++ D +V A ++ V AYV+ Y
Sbjct: 319 LYAVLVHAGWSCHDGHYFSYVKAQEGQWYKMDDAKVTACSITSVLSQQAYVLFY 372
>sp|A5D9H7|UBP12_BOVIN Ubiquitin carboxyl-terminal hydrolase 12 OS=Bos taurus GN=USP12
PE=2 SV=1
Length = 369
Score = 69.3 bits (168), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 73/267 (27%), Positives = 107/267 (40%), Gaps = 61/267 (22%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLKV-- 58
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 92 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 151
Query: 59 ------ISGSNN-----------------------------------LELSLDIYQLSSL 77
I NN L+LS+D+ Q +S+
Sbjct: 152 RLPNGNIDSENNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTSI 211
Query: 78 DEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC-----L 132
L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 212 THCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPMILALHLKRFKYMDQLHRYT 271
Query: 133 KISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYF 186
K+S V PL L G + R +LV+ V+H GS GHY I S + F
Sbjct: 272 KLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLLF 330
Query: 187 GDDRVQASNLQQVTNAYVVIYELLPSS 213
DD V+ + Q + Y + ++ +S
Sbjct: 331 DDDIVEKIDAQAIEEFYGLTSDISKNS 357
>sp|A5WWB0|UBP46_DANRE Ubiquitin carboxyl-terminal hydrolase 46 OS=Danio rerio GN=usp46
PE=3 SV=2
Length = 370
Score = 68.9 bits (167), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 79/160 (49%), Gaps = 12/160 (7%)
Query: 65 LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLL 124
L+LS+D+ Q +S+ L F E L + Y CE C K EA K+ ++K P++ L L
Sbjct: 200 LDLSVDVEQNTSITHCLRDFSNTETLCSEYKYYCEMCCSKQEAQKRMRVKKLPMILALHL 259
Query: 125 KRFNYL-----CLKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYN 173
KRF Y+ K+S V PL L G ++ R +LV+ V+H GS GHY
Sbjct: 260 KRFKYMEQLHRYTKLSYRVVFPLELRLFNTSGDAVNLDRMYDLVAVVVHCGSGPNRGHYI 319
Query: 174 CIGSTSSGSYHYFGDDRVQASNLQQVTNAYVVIYELLPSS 213
I S G + F DD V+ + Q + Y + ++ +S
Sbjct: 320 TI-VKSHGFWLLFDDDIVEKIDAQAIEEFYGLTSDISKNS 358
>sp|P50102|UBP8_YEAST Ubiquitin carboxyl-terminal hydrolase 8 OS=Saccharomyces cerevisiae
(strain ATCC 204508 / S288c) GN=UBP8 PE=1 SV=1
Length = 471
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/244 (27%), Positives = 97/244 (39%), Gaps = 64/244 (26%)
Query: 28 IAHHFEYYRPEDSHEFLLYLIEGIHRSYL------KVISGSNN----------------- 64
I + Y +D+HEF ++I IH+SY+ K +S +NN
Sbjct: 226 INQNLAGYSQQDAHEFWQFIINQIHQSYVLDLPNAKEVSRANNKQCECIVHTVFEGSLES 285
Query: 65 ------------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTE 106
L+LSLDI L E L F KE L +D Y C +C +
Sbjct: 286 SIVCPGCQNNSKTTIDPFLDLSLDIKDKKKLYECLDSFHKKEQL-KDFNYHCGECNSTQD 344
Query: 107 ATKQFSIEKPPIVFILLLKRFNYLC----LKISCAVQVPLYL---------------EFG 147
A KQ I K P V +L LKRF +L K+ ++ P YL E G
Sbjct: 345 AIKQLGIHKLPSVLVLQLKRFEHLLNGSNRKLDDFIEFPTYLNMKNYCSTKEKDKHSENG 404
Query: 148 KFMHCRRNLVSAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQASNLQQV--TNAYVV 205
K L+ V H G+ + GHY S G + F D V + + ++V AY++
Sbjct: 405 KVPDIIYELIGIVSHKGTVN-EGHYIAFCKISGGQWFKFNDSMVSSISQEEVLKEQAYLL 463
Query: 206 IYEL 209
Y +
Sbjct: 464 FYTI 467
>sp|A4FUN7|UBP12_DANRE Ubiquitin carboxyl-terminal hydrolase 12A OS=Danio rerio GN=usp12a
PE=2 SV=1
Length = 371
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/269 (27%), Positives = 109/269 (40%), Gaps = 63/269 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI----------HRSYL 56
A Q I P+ I +L+ F+ Y +D+HEFL YL+ I +
Sbjct: 92 ANQKRKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADLLQEERKQDKQNG 151
Query: 57 KVISGS-----NN------------------------------------LELSLDIYQLS 75
K+ +G+ NN L+LS+D+ Q +
Sbjct: 152 KLANGTLDSQNNNSTPPSTTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNT 211
Query: 76 SLDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYL----- 130
S+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 212 SITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMRVKKLPMILALHLKRFKYMEQLQR 271
Query: 131 CLKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYH 184
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 272 YTKLSYRVVFPLELRLFNTSGDATNPERLYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWL 330
Query: 185 YFGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + E+ +S
Sbjct: 331 LFDDDIVEKIDAQAIEEFYGLTSEISKNS 359
>sp|Q9D9M2|UBP12_MOUSE Ubiquitin carboxyl-terminal hydrolase 12 OS=Mus musculus GN=Usp12
PE=2 SV=2
Length = 370
Score = 68.6 bits (166), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 73/268 (27%), Positives = 108/268 (40%), Gaps = 62/268 (23%)
Query: 7 ACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGI------HRSYLK--- 57
A Q + I P+ I +L+ F+ Y +D+HEFL YL+ I R K
Sbjct: 92 ATQKKKVGVIPPKKFITRLRKENELFDNYMQQDAHEFLNYLLNTIADILQEERKQEKQNG 151
Query: 58 ------VISGSNN-----------------------------------LELSLDIYQLSS 76
V + NN L+LS+D+ Q +S
Sbjct: 152 RLRNGDVDNEDNNSTPDPTWVHEIFQGTLTNETRCLTCETISSKDEDFLDLSVDVEQNTS 211
Query: 77 LDEALGQFFAKEYLVRDNLYQCEKCGYKTEATKQFSIEKPPIVFILLLKRFNYLC----- 131
+ L F E L + Y CE+C K EA K+ ++K P++ L LKRF Y+
Sbjct: 212 ITHCLRGFSNTETLCSEYKYYCEECRSKQEAHKRMKVKKLPLILALHLKRFKYMDQLHRY 271
Query: 132 LKISCAVQVPLYLEF----GKFMHCRR--NLVSAVIHHGSSSFSGHYNCIGSTSSGSYHY 185
K+S V PL L G + R +LV+ V+H GS GHY I S +
Sbjct: 272 TKLSYRVVFPLELRLFNTSGDATNPDRMYDLVAVVVHCGSGPNRGHYIAI-VKSHDFWLL 330
Query: 186 FGDDRVQASNLQQVTNAYVVIYELLPSS 213
F DD V+ + Q + Y + ++ +S
Sbjct: 331 FDDDIVEKIDAQAIEEFYGLTSDISKNS 358
>sp|Q8LAM0|UBP4_ARATH Ubiquitin carboxyl-terminal hydrolase 4 OS=Arabidopsis thaliana
GN=UBP4 PE=1 SV=2
Length = 365
Score = 68.2 bits (165), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 57/215 (26%), Positives = 99/215 (46%), Gaps = 33/215 (15%)
Query: 1 MRKTLAACQAESGSAIIPELIINKLKLIAHHFEYYRPEDSHEFLLYLIEGIHRSYLKVIS 60
+ K A +A++ ++ PE I N LK + + P ++ +H+ + +++
Sbjct: 126 LEKETQATKADNETSSSPEKIANVLKAPLANGVHKEP---------IVTWVHKIFQGILT 176
Query: 61 GSNN--------------LELSLDIYQLSSLDEALGQFFAKEYLVRDNLYQCEKCGYKTE 106
L+LSLDI Q SS+ L F + E L ++ + C+KC E
Sbjct: 177 NETRCLRCETVTARDETFLDLSLDIEQNSSITSCLKNFSSTETLHAEDKFFCDKCCSLQE 236
Query: 107 ATKQFSIEKPPIVFILLLKRFNYL-----CLKISCAVQVPLYLEFG----KFMHCRRNLV 157
A K+ I+KPP + ++ LKRF Y+ K+S V PL L+ +++ +L
Sbjct: 237 AQKRMKIKKPPHILVIHLKRFKYMEQLGRYKKLSYRVVFPLELKLSNTVDEYVDIEYSLF 296
Query: 158 SAVIHHGSSSFSGHYNCIGSTSSGSYHYFGDDRVQ 192
+ V+H GS GHY + S + +F D+ V+
Sbjct: 297 AVVVHVGSGPNHGHYVSL-VKSHNHWLFFDDESVE 330
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.322 0.136 0.405
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 88,947,015
Number of Sequences: 539616
Number of extensions: 3586619
Number of successful extensions: 9041
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 187
Number of HSP's successfully gapped in prelim test: 68
Number of HSP's that attempted gapping in prelim test: 8534
Number of HSP's gapped (non-prelim): 434
length of query: 242
length of database: 191,569,459
effective HSP length: 114
effective length of query: 128
effective length of database: 130,053,235
effective search space: 16646814080
effective search space used: 16646814080
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.9 bits)
S2: 59 (27.3 bits)