BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13204
(189 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3GDH|A Chain A, Methyltransferase Domain Of Human Trimethylguanosine
Synthase 1 (Tgs1) Bound To M7gtp And
Adenosyl-Homocysteine (Active Form)
pdb|3GDH|B Chain B, Methyltransferase Domain Of Human Trimethylguanosine
Synthase 1 (Tgs1) Bound To M7gtp And
Adenosyl-Homocysteine (Active Form)
pdb|3GDH|C Chain C, Methyltransferase Domain Of Human Trimethylguanosine
Synthase 1 (Tgs1) Bound To M7gtp And
Adenosyl-Homocysteine (Active Form)
Length = 241
Score = 163 bits (412), Expect = 6e-41, Method: Compositional matrix adjust.
Identities = 79/147 (53%), Positives = 106/147 (72%), Gaps = 6/147 (4%)
Query: 43 ESWYSVTPEKVAQHIASRCKAS---DVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLR 99
E W+SVTPEK+A+HIA R S DVV+D FCG GGNTIQFA +VI+IDIDP K+
Sbjct: 55 EGWFSVTPEKIAEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIA 114
Query: 100 LAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARS-SFSIDNIFPEQ 158
LA++NA VYG++ KI+FI GDF LA L+ DVVFLSPPWGGP+YA + +F I +
Sbjct: 115 LARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWGGPDYATAETFDIRTMMSPD 174
Query: 159 GGGRRLFQVARGISPNVGYYLPRTSDV 185
G +F++++ I+ N+ Y+LPR +D+
Sbjct: 175 --GFEIFRLSKKITNNIVYFLPRNADI 199
>pdb|3EGI|A Chain A, Methyltransferase Domain Of Human Trimethylguanosine
Synthase Tgs1 Bound To M7gpppa (Inactive Form)
pdb|3EGI|B Chain B, Methyltransferase Domain Of Human Trimethylguanosine
Synthase Tgs1 Bound To M7gpppa (Inactive Form)
pdb|3EGI|C Chain C, Methyltransferase Domain Of Human Trimethylguanosine
Synthase Tgs1 Bound To M7gpppa (Inactive Form)
pdb|3EGI|D Chain D, Methyltransferase Domain Of Human Trimethylguanosine
Synthase Tgs1 Bound To M7gpppa (Inactive Form)
Length = 206
Score = 161 bits (408), Expect = 2e-40, Method: Compositional matrix adjust.
Identities = 78/146 (53%), Positives = 104/146 (71%), Gaps = 4/146 (2%)
Query: 43 ESWYSVTPEKVAQHIASRCKAS---DVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLR 99
E W+SVTPEK+A+HIA R S DVV+D FCG GGNTIQFA +VI+IDIDP K+
Sbjct: 20 EGWFSVTPEKIAEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTGXRVIAIDIDPVKIA 79
Query: 100 LAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARSSFSIDNIFPEQG 159
LA++NA VYG++ KI+FI GDF LA L+ DVVFLSPPWGGP+YA + + D
Sbjct: 80 LARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWGGPDYATAE-TFDIRTXXSP 138
Query: 160 GGRRLFQVARGISPNVGYYLPRTSDV 185
G +F++++ I+ N+ Y+LPR +D+
Sbjct: 139 DGFEIFRLSKKITNNIVYFLPRNADI 164
>pdb|2ZZN|A Chain A, The Complex Structure Of Atrm5 And Trnacys
pdb|2ZZN|B Chain B, The Complex Structure Of Atrm5 And Trnacys
pdb|3AY0|A Chain A, Crystal Structure Of Methanocaldococcus Jannaschii Trm5 In
Complex With Adenosine
pdb|3AY0|B Chain B, Crystal Structure Of Methanocaldococcus Jannaschii Trm5 In
Complex With Adenosine
Length = 336
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 56 HIASRCKASDVVIDGFCGCGGNTIQFAAVCQ---KVISIDIDPAKLRLAQHNASVYGVSH 112
I + +DVV+D F G G F+ C+ K+ +IDI+P + L + N + + H
Sbjct: 188 RIMKKVSLNDVVVDMFAGVG----PFSIACKNAKKIYAIDINPHAIELLKKNIKLNKLEH 243
Query: 113 KIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARSSFSIDNIFPEQGG 160
KI I D + ++G+ V ++ P ++ + I E+GG
Sbjct: 244 KIIPILSDVREV--DVKGNRVIMNLPKFAHKFIDKALDI----VEEGG 285
>pdb|1KXZ|A Chain A, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, P1 Spacegroup
pdb|1KXZ|B Chain B, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, P1 Spacegroup
pdb|1KXZ|C Chain C, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, P1 Spacegroup
pdb|1KXZ|D Chain D, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, P1 Spacegroup
pdb|1KXZ|E Chain E, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, P1 Spacegroup
pdb|1KXZ|F Chain F, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, P1 Spacegroup
pdb|1KXZ|G Chain G, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, P1 Spacegroup
pdb|1KXZ|H Chain H, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, P1 Spacegroup
pdb|1L3B|A Chain A, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, C2 Spacegroup W LONG CELL
pdb|1L3B|B Chain B, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, C2 Spacegroup W LONG CELL
pdb|1L3B|C Chain C, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, C2 Spacegroup W LONG CELL
pdb|1L3B|D Chain D, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, C2 Spacegroup W LONG CELL
pdb|1L3B|E Chain E, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, C2 Spacegroup W LONG CELL
pdb|1L3B|F Chain F, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, C2 Spacegroup W LONG CELL
pdb|1L3B|G Chain G, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, C2 Spacegroup W LONG CELL
pdb|1L3B|H Chain H, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, C2 Spacegroup W LONG CELL
pdb|1L3C|A Chain A, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, C2 Spacegroup With Short
Cell
pdb|1L3C|B Chain B, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, C2 Spacegroup With Short
Cell
pdb|1L3C|C Chain C, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, C2 Spacegroup With Short
Cell
pdb|1L3C|D Chain D, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, C2 Spacegroup With Short
Cell
pdb|1L3I|A Chain A, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, Adohcy Binary Complex
pdb|1L3I|B Chain B, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, Adohcy Binary Complex
pdb|1L3I|C Chain C, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, Adohcy Binary Complex
pdb|1L3I|D Chain D, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, Adohcy Binary Complex
pdb|1L3I|E Chain E, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, Adohcy Binary Complex
pdb|1L3I|F Chain F, Mt0146, The Precorrin-6y Methyltransferase (Cbit) Homolog
From M. Thermoautotrophicum, Adohcy Binary Complex
pdb|1F38|A Chain A, X-Ray Crystallographic Structure Of Precorrin 8w
Decarboxylase, The Product Of Gene Mt0146 In The
Methanobacterium Thermoautotrophicum Genome
pdb|1F38|B Chain B, X-Ray Crystallographic Structure Of Precorrin 8w
Decarboxylase, The Product Of Gene Mt0146 In The
Methanobacterium Thermoautotrophicum Genome
pdb|1F38|C Chain C, X-Ray Crystallographic Structure Of Precorrin 8w
Decarboxylase, The Product Of Gene Mt0146 In The
Methanobacterium Thermoautotrophicum Genome
pdb|1F38|D Chain D, X-Ray Crystallographic Structure Of Precorrin 8w
Decarboxylase, The Product Of Gene Mt0146 In The
Methanobacterium Thermoautotrophicum Genome
Length = 192
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 31/57 (54%)
Query: 64 SDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGD 120
+DV +D CG GG T++ A ++V +ID +P + + N +G+ + +GD
Sbjct: 34 NDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEXNLQRHGLGDNVTLXEGD 90
>pdb|1WZN|A Chain A, Crystal Structure Of The Sam-Dependent Methyltransferase
From Pyrococcus Horikoshii Ot3
pdb|1WZN|B Chain B, Crystal Structure Of The Sam-Dependent Methyltransferase
From Pyrococcus Horikoshii Ot3
pdb|1WZN|C Chain C, Crystal Structure Of The Sam-Dependent Methyltransferase
From Pyrococcus Horikoshii Ot3
Length = 252
Score = 40.4 bits (93), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/67 (32%), Positives = 36/67 (53%), Gaps = 2/67 (2%)
Query: 67 VIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP 126
V+D CG G T++ A +V+ +D+ LR+A+ A + KI+F+QGD +A
Sbjct: 45 VLDLACGTGIPTLELAERGYEVVGLDLHEEMLRVARRKAKERNL--KIEFLQGDVLEIAF 102
Query: 127 SLQGDVV 133
+ D V
Sbjct: 103 KNEFDAV 109
>pdb|2ZZM|A Chain A, The Complex Structure Of Atrm5 And Trnaleu
Length = 336
Score = 40.4 bits (93), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Query: 56 HIASRCKASDVVIDGFCGCGGNTIQFAAVCQ---KVISIDIDPAKLRLAQHNASVYGVSH 112
I + +DVV+D F G G F+ C+ K+ +IDI+P + L N + + H
Sbjct: 188 RIMKKVSLNDVVVDMFAGVG----PFSIACKNAKKIYAIDINPHAIELLXKNIKLNKLEH 243
Query: 113 KIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARSSFSIDNIFPEQGG 160
KI I D + ++G+ V ++ P ++ + I E+GG
Sbjct: 244 KIIPILSDVREV--DVKGNRVIMNLPKFAHKFIDKALDI----VEEGG 285
>pdb|2YX1|A Chain A, Crystal Structure Of M.Jannaschii Trna M1g37
Methyltransferase
pdb|2YX1|B Chain B, Crystal Structure Of M.Jannaschii Trna M1g37
Methyltransferase
Length = 336
Score = 40.0 bits (92), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 50/108 (46%), Gaps = 13/108 (12%)
Query: 56 HIASRCKASDVVIDGFCGCGGNTIQFAAVCQ---KVISIDIDPAKLRLAQHNASVYGVSH 112
I + +DVV+D F G G F+ C+ K+ +IDI+P + L + N + + H
Sbjct: 188 RIXKKVSLNDVVVDXFAGVG----PFSIACKNAKKIYAIDINPHAIELLKKNIKLNKLEH 243
Query: 113 KIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARSSFSIDNIFPEQGG 160
KI I D + ++G+ V + P ++ + I E+GG
Sbjct: 244 KIIPILSDVREV--DVKGNRVIXNLPKFAHKFIDKALDI----VEEGG 285
>pdb|3LDU|A Chain A, The Crystal Structure Of A Possible Methylase From
Clostridium Difficile 630
Length = 385
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/101 (26%), Positives = 43/101 (42%), Gaps = 9/101 (8%)
Query: 87 KVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYAR 146
K+ DID + +A+ NA + GV I+F GD + + +PP+G E
Sbjct: 259 KIYGYDIDEESIDIARENAEIAGVDEYIEFNVGDATQFKSEDEFGFIITNPPYG--ERLE 316
Query: 147 SSFSIDNIFPEQGGGRRLFQVARGISPNVGYYLPRTSDVFE 187
S+ ++ E G R + N YYL + + FE
Sbjct: 317 DKDSVKQLYKELGYAFRKLK-------NWSYYLITSYEDFE 350
>pdb|2H1R|A Chain A, Crystal Structure Of A Dimethyladenosine Transferase
From Plasmodium Falciparum
pdb|2H1R|B Chain B, Crystal Structure Of A Dimethyladenosine Transferase
From Plasmodium Falciparum
Length = 299
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 58 ASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDID 94
A++ K+SD+V++ CG G T++ + +KVI+IDID
Sbjct: 37 AAKIKSSDIVLEIGCGTGNLTVKLLPLAKKVITIDID 73
>pdb|3CJT|A Chain A, Ribosomal Protein L11 Methyltransferase (prma) In Complex
With Dimethylated Ribosomal Protein L11
pdb|3CJT|C Chain C, Ribosomal Protein L11 Methyltransferase (prma) In Complex
With Dimethylated Ribosomal Protein L11
pdb|3CJT|E Chain E, Ribosomal Protein L11 Methyltransferase (prma) In Complex
With Dimethylated Ribosomal Protein L11
pdb|3CJT|G Chain G, Ribosomal Protein L11 Methyltransferase (prma) In Complex
With Dimethylated Ribosomal Protein L11
pdb|3CJT|I Chain I, Ribosomal Protein L11 Methyltransferase (prma) In Complex
With Dimethylated Ribosomal Protein L11
pdb|3CJT|K Chain K, Ribosomal Protein L11 Methyltransferase (prma) In Complex
With Dimethylated Ribosomal Protein L11
pdb|3CJT|M Chain M, Ribosomal Protein L11 Methyltransferase (prma) In Complex
With Dimethylated Ribosomal Protein L11
pdb|3CJT|O Chain O, Ribosomal Protein L11 Methyltransferase (prma) In Complex
With Dimethylated Ribosomal Protein L11
Length = 254
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 55 QHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKI 114
+ +A + D V+D G G I + K + +DIDP L A+ NA GV +
Sbjct: 112 KALARHLRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGV--RP 169
Query: 115 QFIQGDFFALAP 126
+F++G A P
Sbjct: 170 RFLEGSLEAALP 181
>pdb|1UFK|A Chain A, Crystal Structure Of Tt0836
pdb|2NXE|A Chain A, T. Thermophilus Ribosomal Protein L11 Methyltransferase
(Prma) In Complex With S-Adenosyl-L-Methionine
pdb|2NXE|B Chain B, T. Thermophilus Ribosomal Protein L11 Methyltransferase
(Prma) In Complex With S-Adenosyl-L-Methionine
pdb|2NXJ|A Chain A, T.Thermophilus Ribosomal Protein L11 Methyltransferase
(Prma) In Space Group P 21 21 2
pdb|2NXJ|B Chain B, T.Thermophilus Ribosomal Protein L11 Methyltransferase
(Prma) In Space Group P 21 21 2
pdb|2NXN|A Chain A, T. Thermophilus Ribosomal Protein L11 Methyltransferase
(Prma) In Complex With Ribosomal Protein L11
pdb|2NXC|A Chain A, Apo-Form Of T. Thermophilus Ribosomal Protein L11
Methyltransferase (Prma)
pdb|3CJQ|A Chain A, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
With Dimethylated Ribosomal Protein L11 In Space Group
P212121
pdb|3CJQ|D Chain D, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
With Dimethylated Ribosomal Protein L11 In Space Group
P212121
pdb|3CJQ|G Chain G, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
With Dimethylated Ribosomal Protein L11 In Space Group
P212121
pdb|3CJR|A Chain A, Ribosomal Protein L11 Methyltransferase (prma) In Complex
With Ribosomal Protein L11 (k39a) And Inhibitor
Sinefungin.
pdb|3EGV|A Chain A, Ribosomal Protein L11 Methyltransferase (Prma) In Complex
With Trimethylated Ribosomal Protein L11
pdb|2ZBP|A Chain A, Crystal Structure Of Ribosomal Protein L11
Methyltransferase From Thermus Thermophilus In Complex
With S-Adenosyl-L-Methionine
pdb|2ZBQ|A Chain A, Crystal Structure Of Ribosomal Protein L11
Methyltransferase From Thermus Thermophilus In Complex
With S-Adenosyl-L-Homocysteine
pdb|2ZBR|A Chain A, Crystal Structure Of Ribosomal Protein L11
Methyltransferase From Thermus Thermophilus In Complex
With S-adenosyl-ornithine
Length = 254
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 34/72 (47%), Gaps = 2/72 (2%)
Query: 55 QHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKI 114
+ +A + D V+D G G I + K + +DIDP L A+ NA GV +
Sbjct: 112 KALARHLRPGDKVLDLGTGSGVLAIAAEKLGGKALGVDIDPMVLPQAEANAKRNGV--RP 169
Query: 115 QFIQGDFFALAP 126
+F++G A P
Sbjct: 170 RFLEGSLEAALP 181
>pdb|2YXD|A Chain A, Crystal Structure Of Cobalamin Biosynthesis Precorrin 8w
Decarboxylase (Cbit)
pdb|2YXD|B Chain B, Crystal Structure Of Cobalamin Biosynthesis Precorrin 8w
Decarboxylase (Cbit)
Length = 183
Score = 36.2 bits (82), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 31/55 (56%), Gaps = 1/55 (1%)
Query: 65 DVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQG 119
DVV+D CG GG T++ A C+ V +ID + + + N + + + + Q I+G
Sbjct: 37 DVVVDVGCGSGGXTVEIAKRCKFVYAIDYLDGAIEVTKQNLAKFNIKN-CQIIKG 90
>pdb|3MGG|A Chain A, Crystal Structure Of Methyl Transferase From
Methanosarcina Mazei
pdb|3MGG|B Chain B, Crystal Structure Of Methyl Transferase From
Methanosarcina Mazei
Length = 276
Score = 35.4 bits (80), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 32/60 (53%), Gaps = 3/60 (5%)
Query: 67 VIDGFCGCGGNTIQFAAVC--QKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL 124
V++ CG G T+ A ++ SIDI P L A+ N G+ + ++F+Q + F+L
Sbjct: 41 VLEAGCGIGAQTVILAKNNPDAEITSIDISPESLEKARENTEKNGIKN-VKFLQANIFSL 99
>pdb|1WS6|A Chain A, The Structure Of Thermus Thermphillus Hb8 Hypothetical
Protein Ttha0928
Length = 171
Score = 34.7 bits (78), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 18/75 (24%), Positives = 36/75 (48%), Gaps = 3/75 (4%)
Query: 68 IDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPS 127
+D F G G ++ A+ + + ++ DP +RL + N G+ ++ + + F
Sbjct: 46 LDPFAGSGAVGLEAASEGWEAVLVEKDPEAVRLLKENVRRTGLGARVVALPVEVFLPEAK 105
Query: 128 LQGD---VVFLSPPW 139
QG+ V F +PP+
Sbjct: 106 AQGERFTVAFXAPPY 120
>pdb|3TLJ|A Chain A, Crystal Structure Of Trm14 From Pyrococcus Furiosus In
Complex With S- Adenosyl-L-Homocysteine
pdb|3TLJ|B Chain B, Crystal Structure Of Trm14 From Pyrococcus Furiosus In
Complex With S- Adenosyl-L-Homocysteine
pdb|3TM4|A Chain A, Crystal Structure Of Trm14 From Pyrococcus Furiosus In
Complex With S- Adenosylmethionine
pdb|3TM4|B Chain B, Crystal Structure Of Trm14 From Pyrococcus Furiosus In
Complex With S- Adenosylmethionine
pdb|3TM5|A Chain A, Crystal Structure Of Trm14 From Pyrococcus Furiosus In
Complex With Sinefungin
pdb|3TM5|B Chain B, Crystal Structure Of Trm14 From Pyrococcus Furiosus In
Complex With Sinefungin
Length = 373
Score = 34.3 bits (77), Expect = 0.040, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 3/77 (3%)
Query: 67 VIDGFCGCGGNTIQFA--AVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL 124
V+D CG G I+ A ++I I+ L A+ NA GV KI+FIQGD L
Sbjct: 221 VLDPMCGSGTILIELALRRYSGEIIGIEKYRKHLIGAEMNALAAGVLDKIKFIQGDATQL 280
Query: 125 APSLQG-DVVFLSPPWG 140
+ + D + P+G
Sbjct: 281 SQYVDSVDFAISNLPYG 297
>pdb|2BH2|A Chain A, Crystal Structure Of E. Coli 5-Methyluridine
Methyltransferase Ruma In Complex With Ribosomal Rna
Substrate And S-Adenosylhomocysteine.
pdb|2BH2|B Chain B, Crystal Structure Of E. Coli 5-Methyluridine
Methyltransferase Ruma In Complex With Ribosomal Rna
Substrate And S-Adenosylhomocysteine
Length = 433
Score = 34.3 bits (77), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 13/68 (19%)
Query: 45 WYSVTPEKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHN 104
W V PE D V+D FCG G T+ A V+ ++ PA + Q N
Sbjct: 281 WLDVQPE-------------DRVLDLFCGMGNFTLPLATQAASVVGVEGVPALVEKGQQN 327
Query: 105 ASVYGVSH 112
A + G+ +
Sbjct: 328 ARLNGLQN 335
>pdb|1UWV|A Chain A, Crystal Structure Of Ruma, The Iron-Sulfur Cluster
Containing E. Coli 23s Ribosomal Rna 5-Methyluridine
Methyltransferase
Length = 433
Score = 33.9 bits (76), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 29/68 (42%), Gaps = 13/68 (19%)
Query: 45 WYSVTPEKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHN 104
W V PE D V+D FCG G T+ A V+ ++ PA + Q N
Sbjct: 281 WLDVQPE-------------DRVLDLFCGXGNFTLPLATQAASVVGVEGVPALVEKGQQN 327
Query: 105 ASVYGVSH 112
A + G+ +
Sbjct: 328 ARLNGLQN 335
>pdb|3SM3|A Chain A, Crystal Structure Of Sam-Dependent Methyltransferases
Q8puk2_metma From Methanosarcina Mazei. Northeast
Structural Genomics Consortium Target Mar262
Length = 235
Score = 33.1 bits (74), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 30/57 (52%)
Query: 57 IASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHK 113
I + + D ++D CG G +++ A+ V IDI+ +RLA+ A G++ K
Sbjct: 24 IHNYLQEDDEILDIGCGSGKISLELASKGYSVTGIDINSEAIRLAETAARSPGLNQK 80
>pdb|3A25|A Chain A, Crystal Structure Of P. Horikoshii Tyw2 In Complex With
Adomet
pdb|3A26|A Chain A, Crystal Structure Of P. Horikoshii Tyw2 In Complex With
Mesado
Length = 301
Score = 33.1 bits (74), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 36/176 (20%), Positives = 67/176 (38%), Gaps = 18/176 (10%)
Query: 20 TVNNSTGLEYFELTLADADNDATESWYSVTPEKVAQHIASRCKASDVVIDGFCGCGGNTI 79
TV+ G++Y D + +S K +A K ++V+D F G G ++
Sbjct: 113 TVHVENGIKY--------KLDVAKIMFSPANVKERVRMAKVAKPDELVVDMFAGIGHLSL 164
Query: 80 QFAAVCQ-KVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPP 138
A + KVI+I+ DP + N + V ++ D D + +
Sbjct: 165 PIAVYGKAKVIAIEKDPYTFKFLVENIHLNKVEDRMSAYNMDNRDFPGENIADRILMGYV 224
Query: 139 WGGPEYARSSFSI---------DNIFPEQGGGRRLFQVARGISPNVGYYLPRTSDV 185
E+ + SI N PE+ R F+ + I+ GY + + +++
Sbjct: 225 VRTHEFIPKALSIAKDGAIIHYHNTVPEKLMPREPFETFKRITKEYGYDVEKLNEL 280
>pdb|3S1L|A Chain A, Crystal Structure Of Apo-Form Furx
pdb|3S1L|B Chain B, Crystal Structure Of Apo-Form Furx
pdb|3S1L|C Chain C, Crystal Structure Of Apo-Form Furx
pdb|3S1L|D Chain D, Crystal Structure Of Apo-Form Furx
pdb|3S2E|A Chain A, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|B Chain B, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|C Chain C, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|D Chain D, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|E Chain E, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|F Chain F, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|G Chain G, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2E|H Chain H, Crystal Structure Of Furx Nadh Complex 1
pdb|3S2F|A Chain A, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|B Chain B, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|C Chain C, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|D Chain D, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|E Chain E, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|F Chain F, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|G Chain G, Crystal Structure Of Furx Nadh:furfural
pdb|3S2F|H Chain H, Crystal Structure Of Furx Nadh:furfural
pdb|3S2G|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2G|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol I
pdb|3S2I|A Chain A, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|B Chain B, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|C Chain C, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|D Chain D, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|E Chain E, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|F Chain F, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|G Chain G, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
pdb|3S2I|H Chain H, Crystal Structure Of Furx Nadh+:furfuryl Alcohol Ii
Length = 340
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%), Gaps = 1/39 (2%)
Query: 66 VVIDGFCGCGGNTIQFA-AVCQKVISIDIDPAKLRLAQH 103
VVI G G G +Q+A A+ +V ++DID AKL LA+
Sbjct: 170 VVISGIGGLGHVAVQYARAMGLRVAAVDIDDAKLNLARR 208
>pdb|1ZQ9|A Chain A, Crystal Structure Of Human Dimethyladenosine Transferase
pdb|1ZQ9|B Chain B, Crystal Structure Of Human Dimethyladenosine Transferase
Length = 285
Score = 30.8 bits (68), Expect = 0.47, Method: Compositional matrix adjust.
Identities = 15/59 (25%), Positives = 30/59 (50%)
Query: 62 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGD 120
+ +DVV++ G G T++ +KV++ ++DP + V+ K+Q + GD
Sbjct: 27 RPTDVVLEVGPGTGNMTVKLLEKAKKVVACELDPRLVAELHKRVQGTPVASKLQVLVGD 85
>pdb|3K6R|A Chain A, Crystal Structure Of Putative Transferase Ph0793 From
Pyrococcus Horikoshii
Length = 278
Score = 30.4 bits (67), Expect = 0.57, Method: Compositional matrix adjust.
Identities = 31/141 (21%), Positives = 52/141 (36%), Gaps = 12/141 (8%)
Query: 49 TPEKVAQHI--ASRCKASDVVIDGFCGCGGNTIQFAAVCQ-KVISIDIDPAKLRLAQHNA 105
+P V + + A K ++V+D F G G ++ A + KVI+I+ DP + N
Sbjct: 109 SPANVKERVRXAKVAKPDELVVDXFAGIGHLSLPIAVYGKAKVIAIEKDPYTFKFLVENI 168
Query: 106 SVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARSSFSI---------DNIFP 156
+ V + D D + E+ + SI N P
Sbjct: 169 HLNKVEDRXSAYNXDNRDFPGENIADRILXGYVVRTHEFIPKALSIAKDGAIIHYHNTVP 228
Query: 157 EQGGGRRLFQVARGISPNVGY 177
E+ R F+ + I+ GY
Sbjct: 229 EKLXPREPFETFKRITKEYGY 249
>pdb|3LCC|A Chain A, Structure Of A Sam-Dependent Halide Methyltransferase From
Arabidopsis Thaliana
Length = 235
Score = 30.4 bits (67), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 32/66 (48%), Gaps = 6/66 (9%)
Query: 72 CGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQ---FIQGDFFALAPSL 128
CG G + + A+ + V+ +DI + L A YG S K + F++ D F P+
Sbjct: 75 CGGGHDVVAMASPERFVVGLDISESALAKANET---YGSSPKAEYFSFVKEDVFTWRPTE 131
Query: 129 QGDVVF 134
D++F
Sbjct: 132 LFDLIF 137
>pdb|3L8D|A Chain A, Crystal Structure Of Methyltransferase From Bacillus
Thuringiensis
Length = 242
Score = 29.6 bits (65), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 19/87 (21%), Positives = 35/87 (40%), Gaps = 4/87 (4%)
Query: 38 DNDATESWYSVTPEKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAK 97
+ ++ E W S + + K V+D CG G T + + K + +DI
Sbjct: 28 NQNSQEXWDSGSRSTIIPFFEQYVKKEAEVLDVGCGDGYGTYKLSRTGYKAVGVDISEVX 87
Query: 98 LRLAQHNASVYGVSHKIQFIQGDFFAL 124
++ + G + FI+GD +L
Sbjct: 88 IQKGKER----GEGPDLSFIKGDLSSL 110
>pdb|3M4X|A Chain A, Structure Of A Ribosomal Methyltransferase
Length = 456
Score = 29.6 bits (65), Expect = 0.96, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 33/72 (45%), Gaps = 3/72 (4%)
Query: 46 YSVTPEKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQK---VISIDIDPAKLRLAQ 102
YS P A+ K + V+D GG + Q AA + +++ +I P + ++
Sbjct: 88 YSQEPSAXIVGTAAAAKPGEKVLDLCAAPGGKSTQLAAQXKGKGLLVTNEIFPKRAKILS 147
Query: 103 HNASVYGVSHKI 114
N +GVS+ I
Sbjct: 148 ENIERWGVSNAI 159
>pdb|1IXK|A Chain A, Crystal Structure Analysis Of Methyltransferase Homolog
Protein From Pyrococcus Horikoshii
Length = 315
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 22/88 (25%), Positives = 37/88 (42%), Gaps = 3/88 (3%)
Query: 57 IASRCKASDVVIDGFCGCGGNTIQFAAVCQK---VISIDIDPAKLRLAQHNASVYGVSHK 113
+A K ++V D GG T A + + + + D+D +LR + N S GV +
Sbjct: 112 VALDPKPGEIVADXAAAPGGKTSYLAQLXRNDGVIYAFDVDENRLRETRLNLSRLGVLNV 171
Query: 114 IQFIQGDFFALAPSLQGDVVFLSPPWGG 141
I F +++ D + L P G
Sbjct: 172 ILFHSSSLHIGELNVEFDKILLDAPCTG 199
>pdb|1VL5|A Chain A, Crystal Structure Of A Putative Methyltransferase (Bh2331)
From Bacillus Halodurans C-125 At 1.95 A Resolution
pdb|1VL5|B Chain B, Crystal Structure Of A Putative Methyltransferase (Bh2331)
From Bacillus Halodurans C-125 At 1.95 A Resolution
pdb|1VL5|C Chain C, Crystal Structure Of A Putative Methyltransferase (Bh2331)
From Bacillus Halodurans C-125 At 1.95 A Resolution
pdb|1VL5|D Chain D, Crystal Structure Of A Putative Methyltransferase (Bh2331)
From Bacillus Halodurans C-125 At 1.95 A Resolution
Length = 260
Score = 29.3 bits (64), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 3/60 (5%)
Query: 62 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSH-KIQFIQGD 120
K ++ V+D G G FA +KV++ D+ L++A+ A + G H +++++QGD
Sbjct: 36 KGNEEVLDVATGGGHVANAFAPFVKKVVAFDLTEDILKVAR--AFIEGNGHQQVEYVQGD 93
>pdb|1XXL|A Chain A, The Crystal Structure Of Ycgj Protein From Bacillus
Subitilis At 2.1 A Resolution
pdb|1XXL|B Chain B, The Crystal Structure Of Ycgj Protein From Bacillus
Subitilis At 2.1 A Resolution
pdb|2GLU|A Chain A, The Crystal Structure Of Ycgj Protein From Bacillus
Subitilis
pdb|2GLU|B Chain B, The Crystal Structure Of Ycgj Protein From Bacillus
Subitilis
Length = 239
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 17/61 (27%), Positives = 29/61 (47%), Gaps = 1/61 (1%)
Query: 59 SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQ 118
+ C+A V+D G G + F+ Q+ I +D + +A A GV + ++F Q
Sbjct: 17 AECRAEHRVLDIGAGAGHTALAFSPYVQECIGVDATKEXVEVASSFAQEKGVEN-VRFQQ 75
Query: 119 G 119
G
Sbjct: 76 G 76
>pdb|1VE3|A Chain A, Crystal Structure Of Ph0226 Protein From Pyrococcus
Horikoshii Ot3
pdb|1VE3|B Chain B, Crystal Structure Of Ph0226 Protein From Pyrococcus
Horikoshii Ot3
Length = 227
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 23/93 (24%), Positives = 38/93 (40%), Gaps = 4/93 (4%)
Query: 28 EYFELTLADADNDATESWYSVTPEKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQK 87
EY+ + D ++ E Y E + + K V+D CG GG + +
Sbjct: 5 EYYRVFPTYTDINSQE--YRSRIETLEPLLXKYXKKRGKVLDLACGVGGFSFLLEDYGFE 62
Query: 88 VISIDIDPAKLRLAQHNASVYGVSHKIQFIQGD 120
V+ +DI +R A+ A ++FI GD
Sbjct: 63 VVGVDISEDXIRKAREYAK--SRESNVEFIVGD 93
>pdb|1LLU|A Chain A, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|B Chain B, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|C Chain C, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|D Chain D, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|E Chain E, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|F Chain F, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|G Chain G, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
pdb|1LLU|H Chain H, The Ternary Complex Of Pseudomonas Aeruginosa Alcohol
Dehydrogenase With Its Coenzyme And Weak Substrate
Length = 342
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 23/38 (60%), Gaps = 1/38 (2%)
Query: 66 VVIDGFCGCGGNTIQFA-AVCQKVISIDIDPAKLRLAQ 102
V I G G G +Q+A A+ V +IDID AKL LA+
Sbjct: 174 VAISGIGGLGHVAVQYARAMGLHVAAIDIDDAKLELAR 211
>pdb|2ZIE|A Chain A, Crystal Structure Of Ttha0409, Putatative Dna Modification
Methylase From Thermus Thermophilus Hb8-
Selenomethionine Derivative
pdb|2ZIE|B Chain B, Crystal Structure Of Ttha0409, Putatative Dna Modification
Methylase From Thermus Thermophilus Hb8-
Selenomethionine Derivative
Length = 297
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 29 YFELTLADADNDATESWYSVTPEKVAQHIASRCK-ASDVVIDGFCGCGGNTIQFAAVCQK 87
+F D ++T+ + P ++A+ + DVV+D F G G I A ++
Sbjct: 200 FFRQIWDDIPGESTKDHPAPFPLELAERLVRXFSFVGDVVLDPFAGTGTTLIAAARWGRR 259
Query: 88 VISIDIDPAKLRLAQHN 104
+ +++ P +LA+
Sbjct: 260 ALGVELVPRYAQLAKER 276
>pdb|2ZIF|A Chain A, Crystal Structure Of Ttha0409, Putative Dna Modification
Methylase From Thermus Thermophilus Hb8- Complexed With
S- Adenosyl-L-Methionine
pdb|2ZIF|B Chain B, Crystal Structure Of Ttha0409, Putative Dna Modification
Methylase From Thermus Thermophilus Hb8- Complexed With
S- Adenosyl-L-Methionine
pdb|2ZIG|A Chain A, Crystal Structure Of Ttha0409, Putative Dna Modification
Methylase From Thermus Thermophilus Hb8
pdb|2ZIG|B Chain B, Crystal Structure Of Ttha0409, Putative Dna Modification
Methylase From Thermus Thermophilus Hb8
Length = 297
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 17/77 (22%), Positives = 35/77 (45%), Gaps = 1/77 (1%)
Query: 29 YFELTLADADNDATESWYSVTPEKVAQHIASRCK-ASDVVIDGFCGCGGNTIQFAAVCQK 87
+F D ++T+ + P ++A+ + DVV+D F G G I A ++
Sbjct: 200 FFRQIWDDIPGESTKDHPAPFPLELAERLVRMFSFVGDVVLDPFAGTGTTLIAAARWGRR 259
Query: 88 VISIDIDPAKLRLAQHN 104
+ +++ P +LA+
Sbjct: 260 ALGVELVPRYAQLAKER 276
>pdb|3C3Y|A Chain A, Crystal Structure Of Pfomt, Phenylpropanoid And Flavonoid
O- Methyltransferase From M. Crystallinum
pdb|3C3Y|B Chain B, Crystal Structure Of Pfomt, Phenylpropanoid And Flavonoid
O- Methyltransferase From M. Crystallinum
Length = 237
Score = 27.7 bits (60), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 17/45 (37%), Positives = 21/45 (46%), Gaps = 1/45 (2%)
Query: 87 KVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGD-FFALAPSLQG 130
K+ +ID D + GV HKI FI+ D AL LQG
Sbjct: 97 KITAIDFDREAYEIGLPFIRKAGVEHKINFIESDAMLALDNLLQG 141
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.320 0.137 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,828,945
Number of Sequences: 62578
Number of extensions: 233783
Number of successful extensions: 608
Number of sequences better than 100.0: 33
Number of HSP's better than 100.0 without gapping: 16
Number of HSP's successfully gapped in prelim test: 17
Number of HSP's that attempted gapping in prelim test: 584
Number of HSP's gapped (non-prelim): 33
length of query: 189
length of database: 14,973,337
effective HSP length: 93
effective length of query: 96
effective length of database: 9,153,583
effective search space: 878743968
effective search space used: 878743968
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 48 (23.1 bits)