BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13204
(189 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P85107|TGS1_RAT Trimethylguanosine synthase OS=Rattus norvegicus GN=Tgs1 PE=1 SV=1
Length = 850
Score = 167 bits (423), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 80/147 (54%), Positives = 108/147 (73%), Gaps = 6/147 (4%)
Query: 43 ESWYSVTPEKVAQHIASRCKAS---DVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLR 99
E W+SVTPEK+A+HIA R S D+++D FCG GGNTIQFA ++VI+IDIDP K+
Sbjct: 661 EGWFSVTPEKIAEHIAGRVSQSFNCDIIVDAFCGVGGNTIQFALTGKRVIAIDIDPVKID 720
Query: 100 LAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARS-SFSIDNIFPEQ 158
LA++NA VYGV+ KI+FI GDF LAP L+ DVVFLSPPWGGP+YA + +F I +
Sbjct: 721 LARNNAEVYGVADKIEFICGDFLLLAPCLKADVVFLSPPWGGPDYATAETFDIRTMM--S 778
Query: 159 GGGRRLFQVARGISPNVGYYLPRTSDV 185
G +F++++ I+ N+ Y+LPR +DV
Sbjct: 779 PDGFEIFRLSQKITNNIVYFLPRNADV 805
>sp|Q923W1|TGS1_MOUSE Trimethylguanosine synthase OS=Mus musculus GN=Tgs1 PE=1 SV=2
Length = 853
Score = 166 bits (421), Expect = 7e-41, Method: Compositional matrix adjust.
Identities = 79/147 (53%), Positives = 108/147 (73%), Gaps = 6/147 (4%)
Query: 43 ESWYSVTPEKVAQHIASRCKAS---DVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLR 99
E W+SVTPEK+A+HIA R + DVV+D FCG GGNTIQFA ++VI+IDIDP K+
Sbjct: 659 EGWFSVTPEKIAEHIAGRVSQAFRCDVVVDAFCGVGGNTIQFALTGKRVIAIDIDPVKID 718
Query: 100 LAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARS-SFSIDNIFPEQ 158
LA++NA VYG++ KI+FI GDF LAP L+ DVVFLSPPWGGP+YA + +F I +
Sbjct: 719 LARNNAEVYGIADKIEFICGDFLLLAPCLKADVVFLSPPWGGPDYATAETFDIRTMM--S 776
Query: 159 GGGRRLFQVARGISPNVGYYLPRTSDV 185
G +F++++ I+ N+ Y+LPR +D+
Sbjct: 777 PDGFEIFRLSQKITNNIVYFLPRNADI 803
>sp|Q96RS0|TGS1_HUMAN Trimethylguanosine synthase OS=Homo sapiens GN=TGS1 PE=1 SV=3
Length = 853
Score = 163 bits (412), Expect = 7e-40, Method: Compositional matrix adjust.
Identities = 79/147 (53%), Positives = 106/147 (72%), Gaps = 6/147 (4%)
Query: 43 ESWYSVTPEKVAQHIASRCKAS---DVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLR 99
E W+SVTPEK+A+HIA R S DVV+D FCG GGNTIQFA +VI+IDIDP K+
Sbjct: 667 EGWFSVTPEKIAEHIAGRVSQSFKCDVVVDAFCGVGGNTIQFALTGMRVIAIDIDPVKIA 726
Query: 100 LAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARS-SFSIDNIFPEQ 158
LA++NA VYG++ KI+FI GDF LA L+ DVVFLSPPWGGP+YA + +F I +
Sbjct: 727 LARNNAEVYGIADKIEFICGDFLLLASFLKADVVFLSPPWGGPDYATAETFDIRTMM--S 784
Query: 159 GGGRRLFQVARGISPNVGYYLPRTSDV 185
G +F++++ I+ N+ Y+LPR +D+
Sbjct: 785 PDGFEIFRLSKKITNNIVYFLPRNADI 811
>sp|Q09814|TGS1_SCHPO Trimethylguanosine synthase OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=tgs1 PE=1 SV=3
Length = 239
Score = 131 bits (330), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 75/156 (48%), Positives = 100/156 (64%), Gaps = 13/156 (8%)
Query: 43 ESWYSVTPEKVAQHIASRCK---ASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLR 99
+SWYSVTPEKVA IA +++ID F GCGGNTIQFA C VISI+IDP K+
Sbjct: 49 QSWYSVTPEKVAVAIAKSVVDFIQPELIIDAFSGCGGNTIQFAKYCP-VISIEIDPIKIA 107
Query: 100 LAQHNASVYGV-SHKIQFIQGDFFALAPSLQ-----GDVVFLSPPWGGPEYA-RSSFSID 152
+A+HN +YG+ S ++ FIQGD SLQ +VF+SPPWGGP Y+ ++ +S++
Sbjct: 108 MAKHNLEIYGIPSSRVTFIQGDVLDTFKSLQFAKDYRSLVFMSPPWGGPSYSGKTVYSLN 167
Query: 153 NIFPEQGGGRRLFQVARGISPNVGYYLPRTSDVFEL 188
++ P LF+ A ISP V +LPR +DV EL
Sbjct: 168 DLNPY--AFDVLFKEATRISPYVAAFLPRNTDVKEL 201
>sp|Q12052|TGS1_YEAST Trimethylguanosine synthase OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=TGS1 PE=1 SV=1
Length = 315
Score = 96.3 bits (238), Expect = 1e-19, Method: Compositional matrix adjust.
Identities = 57/155 (36%), Positives = 82/155 (52%), Gaps = 9/155 (5%)
Query: 43 ESWYSVTPEKVAQHIASRCKA----SDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKL 98
E W+SVTPE++A +A+ KA ++ ++D FCG GGNTIQFA V +D +
Sbjct: 73 ELWFSVTPERIACFLANFVKACMPNAERILDVFCGGGGNTIQFAMQFPYVYGVDYSIEHI 132
Query: 99 RLAQHNASVYGVSHKIQFIQGDFFALA-----PSLQGDVVFLSPPWGGPEYARSSFSIDN 153
NA YGV +I +G + L ++ D VF SPPWGGPEY R+
Sbjct: 133 YCTAKNAQSYGVDDRIWLKRGSWKKLVSKQKLSKIKYDCVFGSPPWGGPEYLRNDVYDLE 192
Query: 154 IFPEQGGGRRLFQVARGISPNVGYYLPRTSDVFEL 188
+ G ++ + +SPNV +LPR SD+ +L
Sbjct: 193 QHLKPMGITKMLKSFLKLSPNVIMFLPRNSDLNQL 227
>sp|Q2RFW1|PRMC_MOOTA Release factor glutamine methyltransferase OS=Moorella
thermoacetica (strain ATCC 39073) GN=prmC PE=3 SV=1
Length = 283
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/93 (29%), Positives = 43/93 (46%), Gaps = 4/93 (4%)
Query: 51 EKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVC----QKVISIDIDPAKLRLAQHNAS 106
E V + + R + CG G I + +V + DI PA L +AQ NA
Sbjct: 98 EVVVEAVLERLDPCESYTIADCGTGSGAIALSLAHYLPRARVYATDISPAALTVAQENAR 157
Query: 107 VYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPW 139
G++ ++ +QGDF A L+ D + +PP+
Sbjct: 158 KLGLAARVTLLQGDFLAPLRGLKLDALVANPPY 190
>sp|Q7NGN4|Y3134_GLOVI Uncharacterized RNA methyltransferase gll3134 OS=Gloeobacter
violaceus (strain PCC 7421) GN=gll3134 PE=3 SV=1
Length = 457
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/79 (30%), Positives = 41/79 (51%), Gaps = 1/79 (1%)
Query: 63 ASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFF 122
A V+D +CG G ++ A + V+ I+ + A+ NA + G+ + +F+ G
Sbjct: 315 AEQTVVDAYCGIGTLSLPLARAARAVVGIESHVRSVEQARQNARINGIEN-CRFLAGTVE 373
Query: 123 ALAPSLQGDVVFLSPPWGG 141
AL P L+ D+V + PP G
Sbjct: 374 ALLPDLRADIVVVDPPRKG 392
>sp|Q9KF10|Y687_BACHD Uncharacterized RNA methyltransferase BH0687 OS=Bacillus halodurans
(strain ATCC BAA-125 / DSM 18197 / FERM 7344 / JCM 9153
/ C-125) GN=BH0687 PE=3 SV=1
Length = 458
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 69/144 (47%), Gaps = 13/144 (9%)
Query: 26 GLEYFELTLADAD-NDATESWYSVTPEKVA----QHIA-SRCKASDVVIDGFCGCGGNTI 79
G EY T+ D + S+Y V PE+ Q + + S+ VID +CG G ++
Sbjct: 267 GEEYIYDTIGDIKFAISARSFYQVNPEQTKVLYDQALEFANLTGSETVIDAYCGIGTISL 326
Query: 80 QFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAP-----SLQGDVVF 134
A + V ++I P + A+ NA + G ++ +QF GD + P ++ DV+
Sbjct: 327 FLAQQAKHVYGVEIVPEAISDAKRNARLNGFAN-VQFAVGDAEKVMPWWYAQGVRADVIV 385
Query: 135 LSPPWGGPEYARSSFSIDNIFPEQ 158
+ PP G + A +I N+ P++
Sbjct: 386 VDPPRKGCDEALLK-TILNMKPDR 408
>sp|Q32DK7|PRMB_SHIDS 50S ribosomal protein L3 glutamine methyltransferase OS=Shigella
dysenteriae serotype 1 (strain Sd197) GN=prmB PE=3 SV=2
Length = 310
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 10/130 (7%)
Query: 52 KVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVS 111
K QHI C S GC +A +V ++DI P L +A+ N +G+
Sbjct: 131 KQPQHILDMCTGS--------GCIAIACAYAFPEAEVDAVDISPDALAVAEQNIEEHGLI 182
Query: 112 HKIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARSSFSIDNIFPEQG--GGRRLFQVAR 169
H + I+ D F P +Q D++ +PP+ E + PE G G ++ R
Sbjct: 183 HNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYRHEPELGLASGTDGLKLTR 242
Query: 170 GISPNVGYYL 179
I N YL
Sbjct: 243 RILGNAADYL 252
>sp|P39199|PRMB_ECOLI 50S ribosomal protein L3 glutamine methyltransferase OS=Escherichia
coli (strain K12) GN=prmB PE=1 SV=3
Length = 310
Score = 47.0 bits (110), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 54/130 (41%), Gaps = 10/130 (7%)
Query: 52 KVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVS 111
K QHI C S GC +A +V ++DI P L +A+ N +G+
Sbjct: 131 KQPQHILDMCTGS--------GCIAIACAYAFPDAEVDAVDISPDALAVAEQNIEEHGLI 182
Query: 112 HKIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARSSFSIDNIFPEQG--GGRRLFQVAR 169
H + I+ D F P +Q D++ +PP+ E + PE G G ++ R
Sbjct: 183 HNVIPIRSDLFRDLPKVQYDLIVTNPPYVDAEDMSDLPNEYRHEPELGLASGTDGLKLTR 242
Query: 170 GISPNVGYYL 179
I N YL
Sbjct: 243 RILGNAADYL 252
>sp|P0A293|PRMB_SALTY 50S ribosomal protein L3 glutamine methyltransferase OS=Salmonella
typhimurium (strain LT2 / SGSC1412 / ATCC 700720)
GN=prmB PE=3 SV=1
Length = 310
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 51 EKVAQHIASRCKASDVVIDGFC---GCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASV 107
E + H A I C GC +A +V ++DI P L +A+HN
Sbjct: 119 ELINNHFAGLISQQPKYILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEHNIEE 178
Query: 108 YGVSHKIQFIQGDFFALAPSLQGDVVFLSPPW 139
+G+ H + I+ D F P +Q D++ +PP+
Sbjct: 179 HGLIHHVTPIRSDLFRDLPKVQYDLIVTNPPY 210
>sp|P0A294|PRMB_SALTI 50S ribosomal protein L3 glutamine methyltransferase OS=Salmonella
typhi GN=prmB PE=3 SV=1
Length = 310
Score = 46.6 bits (109), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 42/92 (45%), Gaps = 3/92 (3%)
Query: 51 EKVAQHIASRCKASDVVIDGFC---GCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASV 107
E + H A I C GC +A +V ++DI P L +A+HN
Sbjct: 119 ELINNHFAGLISQQPKYILDMCTGSGCIAIACAYAFPDAEVDAVDISPDALAVAEHNIEE 178
Query: 108 YGVSHKIQFIQGDFFALAPSLQGDVVFLSPPW 139
+G+ H + I+ D F P +Q D++ +PP+
Sbjct: 179 HGLIHHVTPIRSDLFRDLPKVQYDLIVTNPPY 210
>sp|Q8ES75|Y768_OCEIH Uncharacterized RNA methyltransferase OB0768 OS=Oceanobacillus
iheyensis (strain DSM 14371 / JCM 11309 / KCTC 3954 /
HTE831) GN=OB0768 PE=3 SV=1
Length = 459
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/82 (31%), Positives = 43/82 (52%), Gaps = 6/82 (7%)
Query: 65 DVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL 124
DVVID +CG G ++ A +KV I++ P + A+ NA + G+++ ++F G +
Sbjct: 311 DVVIDAYCGIGSISLFLAQKAKKVYGIEVVPEAIEDAKMNAEINGMNN-VEFSVGQAEKV 369
Query: 125 APS-----LQGDVVFLSPPWGG 141
P L DV+ + PP G
Sbjct: 370 MPKWKEQGLDPDVIVVDPPRKG 391
>sp|Q8KGF9|Y009_CHLTE Uncharacterized RNA methyltransferase CT0009 OS=Chlorobium tepidum
(strain ATCC 49652 / DSM 12025 / TLS) GN=CT0009 PE=3
SV=1
Length = 483
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 64 SDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFF- 122
D V D +CG G T+ A C++ I I++ + ++ A+ NA + G+S+ + F Q D
Sbjct: 334 EDTVYDLYCGTGTITLYLARHCKQAIGIEVVESAVKDAEMNAELNGLSNTV-FFQADLKN 392
Query: 123 ------ALAPSLQGDVVFLSPPWGG 141
AL P + ++ PP G
Sbjct: 393 FHAMQEALEPYAKPRIIVTDPPRAG 417
>sp|O26820|TMG10_METTH tRNA (guanine(10)-N2)-dimethyltransferase OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=trmG10 PE=3 SV=1
Length = 336
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 40/82 (48%), Gaps = 1/82 (1%)
Query: 59 SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQ 118
S KA D ++D FCG GG I+ + +V+ DID + + N YG++ + I+
Sbjct: 183 SGVKAGDRILDPFCGTGGILIEAGLMGVRVVGADIDWRMVEGTRENLQHYGIT-DFEVIR 241
Query: 119 GDFFALAPSLQGDVVFLSPPWG 140
D L + D + PP+G
Sbjct: 242 SDARDLRLDEKVDAIVTDPPYG 263
>sp|Q5XBK8|Y1070_STRP6 Uncharacterized RNA methyltransferase M6_Spy1070 OS=Streptococcus
pyogenes serotype M6 (strain ATCC BAA-946 / MGAS10394)
GN=M6_Spy1070 PE=3 SV=1
Length = 462
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 41 ATESWY---SVTPEKVAQH-IA-SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDP 95
+ +S+Y +V EK+ Q IA S D+VID + G G + FA + V +++
Sbjct: 288 SAQSFYQVNTVMAEKLYQTAIAFSDLSKDDIVIDAYSGIGTIGLSFAKTVKAVYGVEVIE 347
Query: 96 AKLRLAQHNASVYGVSHKIQFIQGDFFALAP----SLQGDVVFLSPPWGG 141
A +R AQHNA++ G+++ A+A ++ V+ + PP G
Sbjct: 348 AAVRDAQHNAALNGITNAYFVADTAEHAMATWAKDGIKPSVILVDPPRKG 397
>sp|P0DG15|Y1024_STRPQ Uncharacterized RNA methyltransferase SPs0836 OS=Streptococcus
pyogenes serotype M3 (strain SSI-1) GN=SPs0836 PE=3 SV=1
Length = 462
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 41 ATESWY---SVTPEKVAQH-IA-SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDP 95
+ +S+Y +V EK+ Q IA S D+VID + G G + FA + V +++
Sbjct: 288 SAQSFYQVNTVMAEKLYQTAIAFSDLSKDDIVIDAYSGIGTIGLSFAKTVKAVYGVEVIE 347
Query: 96 AKLRLAQHNASVYGVSHKIQFIQGDFFALAP----SLQGDVVFLSPPWGG 141
A +R AQHNA++ G+++ A+A ++ V+ + PP G
Sbjct: 348 AAVRDAQHNAALNGITNAYFVADTAEHAMATWAKDGIKPSVILVDPPRKG 397
>sp|P0DG14|Y1024_STRP3 Uncharacterized RNA methyltransferase SpyM3_1024 OS=Streptococcus
pyogenes serotype M3 (strain ATCC BAA-595 / MGAS315)
GN=SpyM3_1024 PE=3 SV=1
Length = 462
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/110 (29%), Positives = 55/110 (50%), Gaps = 9/110 (8%)
Query: 41 ATESWY---SVTPEKVAQH-IA-SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDP 95
+ +S+Y +V EK+ Q IA S D+VID + G G + FA + V +++
Sbjct: 288 SAQSFYQVNTVMAEKLYQTAIAFSDLSKDDIVIDAYSGIGTIGLSFAKTVKAVYGVEVIE 347
Query: 96 AKLRLAQHNASVYGVSHKIQFIQGDFFALAP----SLQGDVVFLSPPWGG 141
A +R AQHNA++ G+++ A+A ++ V+ + PP G
Sbjct: 348 AAVRDAQHNAALNGITNAYFVADTAEHAMATWAKDGIKPSVILVDPPRKG 397
>sp|Q4UJU4|RFTRM_RICFE Bifunctional methyltransferase OS=Rickettsia felis (strain ATCC
VR-1525 / URRWXCal2) GN=prmC/trmB PE=3 SV=1
Length = 527
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 60/129 (46%), Gaps = 16/129 (12%)
Query: 72 CGCGGNTIQFAAVCQ----KVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPS 127
G G I + +C+ +V++ DI + +A++NA Y V+ +IQ I ++F
Sbjct: 148 LGTGSGCIAISLLCELPNARVVATDISLDAIEVARNNALKYHVTDRIQIIHSNWFENLGK 207
Query: 128 LQGDVVFLSPPW----GGPEYARSSFSID---NIFPEQGGGRRLFQVARGISPNVGYYL- 179
+ DV+ +PP+ PE A + + + +F E+ G Q R I+ N +L
Sbjct: 208 QKFDVIVSNPPYISTDEKPEMALETLNHEPYIALFAEEDG----LQAYRIIAENAKKFLK 263
Query: 180 PRTSDVFEL 188
P V E+
Sbjct: 264 PNGKIVLEI 272
>sp|B3PL62|RLMD_CELJU 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD OS=Cellvibrio
japonicus (strain Ueda107) GN=rlmD PE=3 SV=1
Length = 485
Score = 43.1 bits (100), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/84 (29%), Positives = 45/84 (53%), Gaps = 7/84 (8%)
Query: 64 SDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFA 123
+D+V+D FCG G T+ A+ +VI +++ + AQ NA+ G+ + ++F++ D
Sbjct: 332 NDLVLDFFCGMGNFTLPMASRVARVIGLEVVEPMVTRAQANATRLGLDN-LEFLKADLSQ 390
Query: 124 L-APSL-----QGDVVFLSPPWGG 141
+ +P L Q + L PP G
Sbjct: 391 MDSPRLRQLCSQASAILLDPPRDG 414
>sp|P05409|TMG10_METTL Probable tRNA (guanine(10)-N2)-dimethyltransferase (Fragment)
OS=Methanococcus thermolithotrophicus GN=trmG10 PE=3
SV=1
Length = 162
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 63/143 (44%), Gaps = 19/143 (13%)
Query: 59 SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQ 118
SR K DV++D FCG GG I+ + K+I DID + N Y ++ I I+
Sbjct: 10 SRLKKGDVLLDPFCGTGGFLIEGGFMGLKLIGSDIDDDMVNGTLLNLKSYNLTEHIISIK 69
Query: 119 ----GDFFALAPSLQ---GDVVFLSPPWGGPEYARSSFSIDNIFPEQG-----GGRRLFQ 166
GD + L D + PP+G A+ +I+ IF G G +F
Sbjct: 70 KWNAGDIKSFLKQLNVKYVDGIVTDPPYGISTSAKG--NIEEIFNNLGDVLKKDGYLVFA 127
Query: 167 VARGISPNVGYYLPRTSDVFELF 189
+R I+ ++ +++EL+
Sbjct: 128 SSRKINLDL-----ELMEMYELY 145
>sp|Q5UQR2|YL320_MIMIV Uncharacterized protein L320 OS=Acanthamoeba polyphaga mimivirus
GN=MIMI_L320 PE=4 SV=1
Length = 256
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/108 (24%), Positives = 48/108 (44%), Gaps = 10/108 (9%)
Query: 41 ATESWYSVTPEKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRL 100
+ E W +P++ + + V+ + G GGN + FA + V +I+++ + +
Sbjct: 90 SEEKWRLKSPDQRMKKL--------VITEMTAGVGGNVLNFAKYFKYVNAIELNCIRYKY 141
Query: 101 AQHNASVYGVSHKIQFIQGDFFALAPS--LQGDVVFLSPPWGGPEYAR 146
+N +Y S+ + L L D+VF PPWGG Y +
Sbjct: 142 LNNNIKLYDYSNVNCYNDNSVSLLIEKDDLGQDIVFFDPPWGGGGYKQ 189
>sp|Q59043|Y1649_METJA Putative ribosomal RNA large subunit methyltransferase MJ1649
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1649
PE=3 SV=1
Length = 387
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 42/83 (50%), Gaps = 6/83 (7%)
Query: 62 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGV-SHKIQFIQGD 120
K D V+D C GG ++ A +V+ +D+ L+LA+ N + + + +FI+G+
Sbjct: 212 KEGDRVLDICCYTGGFSVHAAIRGAEVVGVDLSKKALKLAEENIELNNIPKDRYEFIEGN 271
Query: 121 FFALAPSL-----QGDVVFLSPP 138
F + + + DVV L PP
Sbjct: 272 AFEVMKEMIEDKEKFDVVILDPP 294
>sp|Q47WQ1|RLMD_COLP3 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD OS=Colwellia
psychrerythraea (strain 34H / ATCC BAA-681) GN=rlmD PE=3
SV=1
Length = 469
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 35/121 (28%), Positives = 57/121 (47%), Gaps = 8/121 (6%)
Query: 37 ADNDATESWYSVTPEKVAQHIA-SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDP 95
+ ND + + V ++Q +A A+D V+D FCG G ++ A ++V+ ++
Sbjct: 294 SSNDFIQINHQVNNAMISQALAWLNILATDNVLDLFCGLGNFSLALAKHAKRVVGVEGMQ 353
Query: 96 AKLRLAQHNASVYGVSHKIQFIQGDF---FALAPSLQG---DVVFLSPPWGGPEYARSSF 149
+ A N+ V G+ + QF Q D + L P +QG D V L P G E A S
Sbjct: 354 TMVDKATQNSLVNGLDN-CQFYQADLNSHWLLEPWVQGQVFDKVLLDPARAGAEQAVSQI 412
Query: 150 S 150
+
Sbjct: 413 A 413
>sp|Q59047|Y1653_METJA Putative ribosomal RNA large subunit methyltransferase MJ1653
OS=Methanocaldococcus jannaschii (strain ATCC 43067 /
DSM 2661 / JAL-1 / JCM 10045 / NBRC 100440) GN=MJ1653
PE=3 SV=1
Length = 385
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 24/83 (28%), Positives = 41/83 (49%), Gaps = 6/83 (7%)
Query: 62 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGV-SHKIQFIQGD 120
K D V+D C GG ++ A +V+ +D+ L+LA+ N + + + +FI+G+
Sbjct: 211 KEGDRVLDICCYTGGFSVHAAIRGAEVVGVDLSKKALKLAEENMELNNIPKDRYEFIEGN 270
Query: 121 FFALAPSL-----QGDVVFLSPP 138
F + + DVV L PP
Sbjct: 271 AFKVMEEFIEDGEKFDVVILDPP 293
>sp|Q8YR05|Y3654_NOSS1 Uncharacterized RNA methyltransferase alr3654 OS=Nostoc sp. (strain
PCC 7120 / UTEX 2576) GN=alr3654 PE=3 SV=1
Length = 460
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 51/100 (51%), Gaps = 5/100 (5%)
Query: 46 YSVTPEKVAQHIASRC--KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQH 103
++ T E + Q I S+ + + +ID +CG G T+ + ++ I +++ P ++ A
Sbjct: 290 FTETAEALLQVIESQLNLQGHETLIDAYCGIGTLTLPLSKQVRQAIGLELQPEAVQQAIV 349
Query: 104 NASVYGVSHKIQFIQGDFFALAPSLQ--GDVVFLSPPWGG 141
NA G+++ ++F G L P + DVV L PP G
Sbjct: 350 NAQHNGINN-VEFQVGAVEKLLPKMGIIPDVVLLDPPRKG 388
>sp|O26249|CBIT_METTH Probable cobalt-precorrin-6Y C(15)-methyltransferase
[decarboxylating] OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=cbiT PE=1 SV=1
Length = 192
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 32/57 (56%)
Query: 64 SDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGD 120
+DV +D CG GG T++ A ++V +ID +P + + N +G+ + ++GD
Sbjct: 34 NDVAVDVGCGTGGVTLELAGRVRRVYAIDRNPEAISTTEMNLQRHGLGDNVTLMEGD 90
>sp|Q837V0|Y728_ENTFA Uncharacterized RNA methyltransferase EF_0728 OS=Enterococcus
faecalis (strain ATCC 700802 / V583) GN=EF_0728 PE=3
SV=1
Length = 457
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/113 (26%), Positives = 53/113 (46%), Gaps = 15/113 (13%)
Query: 41 ATESWYSVTPE-------KVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDI 93
+ S+Y V P+ KV ++ A +++V+D +CG G + A ++V I++
Sbjct: 281 SARSFYQVNPQQTEVMYQKVKEYAA--LTGNEIVVDAYCGIGTIGLTLAQDAKQVYGIEV 338
Query: 94 DPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPS-----LQGDVVFLSPPWGG 141
++ A++NA + + + F G L P LQ DVV + PP G
Sbjct: 339 IEEAVKDAENNAKLNNIENAT-FTAGLAEELLPKLVENGLQPDVVVVDPPRKG 390
>sp|Q58293|TRM5B_METJA tRNA (guanine(37)-N1)-methyltransferase Trm5b OS=Methanocaldococcus
jannaschii (strain ATCC 43067 / DSM 2661 / JAL-1 / JCM
10045 / NBRC 100440) GN=trm5b PE=1 SV=1
Length = 336
Score = 41.6 bits (96), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 51/108 (47%), Gaps = 13/108 (12%)
Query: 56 HIASRCKASDVVIDGFCGCGGNTIQFAAVCQ---KVISIDIDPAKLRLAQHNASVYGVSH 112
I + +DVV+D F G G F+ C+ K+ +IDI+P + L + N + + H
Sbjct: 188 RIMKKVSLNDVVVDMFAGVG----PFSIACKNAKKIYAIDINPHAIELLKKNIKLNKLEH 243
Query: 113 KIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARSSFSIDNIFPEQGG 160
KI I D + ++G+ V ++ P ++ + I E+GG
Sbjct: 244 KIIPILSDVREV--DVKGNRVIMNLPKFAHKFIDKALDI----VEEGG 285
>sp|Q0WDE1|PRMB_YERPE 50S ribosomal protein L3 glutamine methyltransferase OS=Yersinia
pestis GN=prmB PE=3 SV=1
Length = 310
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/88 (26%), Positives = 40/88 (45%), Gaps = 8/88 (9%)
Query: 56 HIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQ 115
HI C S GC +A +V ++DI L + +HN +G+ H++
Sbjct: 135 HILDMCTGS--------GCIAIACAYAFPDAEVDAVDISNDVLAVTEHNIQQHGMEHQVT 186
Query: 116 FIQGDFFALAPSLQGDVVFLSPPWGGPE 143
I+ D F P ++ D++ +PP+ E
Sbjct: 187 PIRSDLFRDLPPIKYDLIVTNPPYVDAE 214
>sp|Q8F9A3|Y292_LEPIN Uncharacterized RNA methyltransferase LA_0292 OS=Leptospira
interrogans serogroup Icterohaemorrhagiae serovar Lai
(strain 56601) GN=LA_0292 PE=3 SV=1
Length = 393
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 44 SWYSVTP---EKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRL 100
+++ V P E + I + V+D +CG G ++ A+ +KVI ++ + + +R
Sbjct: 228 TFFQVNPFQIENLYNLILEDLPENKCVVDAYCGIGTISLYIASKSKKVIGLEENSSSIRS 287
Query: 101 AQHNASVYGVSHKIQFIQG---DFFALAPSLQGDVVFLSPPWGG 141
A + G+ + + FI+G D A + DVV L PP G
Sbjct: 288 AIGASKANGIEN-VHFIKGKVLDTLRAALNENSDVVVLDPPREG 330
>sp|Q72VP7|Y249_LEPIC Uncharacterized RNA methyltransferase LIC_10249 OS=Leptospira
interrogans serogroup Icterohaemorrhagiae serovar
copenhageni (strain Fiocruz L1-130) GN=LIC_10249 PE=3
SV=1
Length = 393
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 50/104 (48%), Gaps = 7/104 (6%)
Query: 44 SWYSVTP---EKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRL 100
+++ V P E + I + V+D +CG G ++ A+ +KVI ++ + + +R
Sbjct: 228 TFFQVNPFQIENLYNLILEDLPENKCVVDAYCGIGTISLYIASKSKKVIGLEENSSSIRS 287
Query: 101 AQHNASVYGVSHKIQFIQG---DFFALAPSLQGDVVFLSPPWGG 141
A + G+ + + FI+G D A + DVV L PP G
Sbjct: 288 AIGASKANGIEN-VHFIKGKVLDTLRAALNENSDVVVLDPPREG 330
>sp|O53284|Y3037_MYCTU Uncharacterized S-adenosylmethionine-dependent methyltransferase
MT3122/Rv3037c OS=Mycobacterium tuberculosis GN=MT3122
PE=3 SV=1
Length = 358
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 56/139 (40%), Gaps = 24/139 (17%)
Query: 43 ESWYSVTPEKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQ 102
E+ T VA+H A R A VV D C G + + + DIDP +L +A+
Sbjct: 43 EALQQATAAPVARHRARRL-AGRVVHDATCSIGTELAALRELAVRAVGSDIDPVRLAMAR 101
Query: 103 HNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARSSFSIDNIFPEQGGGR 162
HN + G+ + + D L P + VV + P AR S GR
Sbjct: 102 HNLAALGM--EADLCRADV--LHPVTRDAVVVIDP-------ARRS-----------NGR 139
Query: 163 RLFQVARGISPNVGYYLPR 181
R F +A P +G L R
Sbjct: 140 RRFHLA-DYQPGLGPLLDR 157
>sp|P73374|Y1967_SYNY3 Uncharacterized RNA methyltransferase sll1967 OS=Synechocystis sp.
(strain PCC 6803 / Kazusa) GN=sll1967 PE=3 SV=1
Length = 463
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/90 (25%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 62 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDF 121
+ +++++D + G G T+ A ++ I+I+++ + Q NA + +++ + F+ G
Sbjct: 315 QGAELLVDAYAGVGTFTLPLARQVRQAIAIEVNQDSVHQGQRNAEINQIAN-VDFLAGTV 373
Query: 122 FALAPSLQG--DVVFLSPPWGG--PEYARS 147
+ P+L DV+ L PP G PE R
Sbjct: 374 ETVLPTLSEIPDVLLLDPPRKGCAPEVLRE 403
>sp|Q74N58|Y053_NANEQ Uncharacterized RNA methyltransferase NEQ053 OS=Nanoarchaeum
equitans (strain Kin4-M) GN=NEQ053 PE=3 SV=1
Length = 447
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 51/104 (49%), Gaps = 12/104 (11%)
Query: 42 TESWYSVTPEKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLA 101
T S+ +V K+ + + +DVV+D + G G ++Q A +KVI I+I + +A
Sbjct: 285 TNSYQAVNLVKIVKEFLEPSE-NDVVLDLYSGVGLFSLQIANEVKKVIGIEIVEEAVEMA 343
Query: 102 QHNASVYGVSHKIQFIQGDFFA----LAPSLQGDVVFLSPPWGG 141
+ NAS I I +F A AP ++ + + + PP G
Sbjct: 344 KLNAS-------INNIDAEFIASPVEKAPIIKANKIIVDPPRAG 380
>sp|Q54QK7|DIM1_DICDI Probable dimethyladenosine transferase OS=Dictyostelium discoideum
GN=dimt1 PE=3 SV=1
Length = 314
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 35/66 (53%)
Query: 59 SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQ 118
S+ K++D V++ G G T++ C+KVI+I++DP Q + + +Q I
Sbjct: 51 SQLKSTDTVLEIGPGTGNLTMKLLENCKKVIAIEVDPRMAAELQKRVAASPYAQHLQIIL 110
Query: 119 GDFFAL 124
GDF +
Sbjct: 111 GDFLKV 116
>sp|Q1II29|PRMC_KORVE Release factor glutamine methyltransferase OS=Koribacter versatilis
(strain Ellin345) GN=prmC PE=3 SV=1
Length = 280
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 53/111 (47%), Gaps = 6/111 (5%)
Query: 73 GCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFF-ALAPSLQGD 131
GC T+ KV ++DI P L++AQ NA+ + +++F D A+ P Q D
Sbjct: 124 GCIAATLAKEFPRMKVTAVDISPEALQIAQANAA--RLEAQVEFRVSDLLSAIEPGRQFD 181
Query: 132 VVFLSPPWGGP-EYARSSFSIDNIFPEQG--GGRRLFQVARGISPNVGYYL 179
++ +PP+ G E + + + P GG R + + ++P V +L
Sbjct: 182 MIVSNPPYVGECEADKVQRQVKDFEPHCAVFGGERGMDIIKRLAPQVWEHL 232
>sp|O31503|RLMCD_BACSU 23S rRNA (uracil-C(5))-methyltransferase RlmCD OS=Bacillus subtilis
(strain 168) GN=rlmCD PE=1 SV=1
Length = 459
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 52/111 (46%), Gaps = 11/111 (9%)
Query: 41 ATESWYSVTPE--KVAQHIA---SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDP 95
+ S+Y V PE KV A + + + VID +CG G ++ A +KV ++I P
Sbjct: 284 SARSFYQVNPEQTKVLYDKALEYAELQGEETVIDAYCGIGTISLFLAKQAKKVYGVEIVP 343
Query: 96 AKLRLAQHNASVYGVSHKIQFIQGDFFALAPS-----LQGDVVFLSPPWGG 141
+ A+ NA + G ++ +F G+ + P + D + + PP G
Sbjct: 344 EAIEDAKRNAELNGNTNA-EFAVGEAETVIPKWYEEGITADTLVVDPPRKG 393
>sp|Q8ZZA9|CBIT_PYRAE Probable cobalt-precorrin-6Y C(15)-methyltransferase
[decarboxylating] OS=Pyrobaculum aerophilum (strain ATCC
51768 / IM2 / DSM 7523 / JCM 9630 / NBRC 100827) GN=cbiT
PE=3 SV=1
Length = 196
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 36/72 (50%), Gaps = 3/72 (4%)
Query: 60 RCKASDVVIDGFCGCGGNTIQFAAVC---QKVISIDIDPAKLRLAQHNASVYGVSHKIQF 116
R ++D CG G +++ A + KV +ID DP + + + NA+ +GV ++
Sbjct: 37 RLIKGGTLVDVGCGTGTISVEAALIMGEGSKVYAIDKDPLAVEITKKNAAKFGVGDRLIV 96
Query: 117 IQGDFFALAPSL 128
+GD L P L
Sbjct: 97 AEGDALELLPKL 108
>sp|B2FJ58|RLMKL_STRMK Ribosomal RNA large subunit methyltransferase K/L
OS=Stenotrophomonas maltophilia (strain K279a) GN=rlmL
PE=3 SV=1
Length = 712
Score = 40.8 bits (94), Expect = 0.005, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 92 DIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL-APSLQGDVVFLSPPW 139
DIDP ++ A+ NA V GV+H I+F + D L AP + V +PP+
Sbjct: 266 DIDPTAIQAARENAEVAGVAHAIRFTRADVADLAAPEQEIGAVVCNPPY 314
>sp|B4SQ79|RLMKL_STRM5 Ribosomal RNA large subunit methyltransferase K/L
OS=Stenotrophomonas maltophilia (strain R551-3) GN=rlmL
PE=3 SV=1
Length = 712
Score = 40.8 bits (94), Expect = 0.005, Method: Composition-based stats.
Identities = 20/49 (40%), Positives = 29/49 (59%), Gaps = 1/49 (2%)
Query: 92 DIDPAKLRLAQHNASVYGVSHKIQFIQGDFFAL-APSLQGDVVFLSPPW 139
DIDP ++ A+ NA V GV+H I+F + D L AP + V +PP+
Sbjct: 266 DIDPTAIQAARENAEVAGVAHAIRFTRADVADLAAPEQEIGAVVCNPPY 314
>sp|B1XU70|RLMD_POLNS 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD
OS=Polynucleobacter necessarius subsp. necessarius
(strain STIR1) GN=rlmD PE=3 SV=1
Length = 475
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 38/82 (46%), Gaps = 7/82 (8%)
Query: 62 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDF 121
+ +D V+D FCG G T+ A ++V+ I+ + A+ NA G+S K F+Q D
Sbjct: 319 QPTDRVLDLFCGIGNFTLPLARKAKQVLGIEGLESLTARAKSNAQHNGLSDKASFMQSDL 378
Query: 122 FALAPSLQGDVVFLSPPWGGPE 143
F + WGG E
Sbjct: 379 FEVTSETVAS-------WGGAE 393
>sp|A5D3Y3|PRMA_PELTS Ribosomal protein L11 methyltransferase OS=Pelotomaculum
thermopropionicum (strain DSM 13744 / JCM 10971 / SI)
GN=prmA PE=3 SV=1
Length = 308
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 29/53 (54%), Gaps = 3/53 (5%)
Query: 73 GCGGNTIQFAAV---CQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDFF 122
G G + AA +V+++DIDP R+A NA GV+ K+Q +QG+
Sbjct: 178 GTGSGVLAVAAARLGAGRVVAVDIDPLACRVAAGNAERNGVAGKVQVVQGNLL 230
>sp|Q97LN4|Y523_CLOAB Uncharacterized RNA methyltransferase CA_C0523 OS=Clostridium
acetobutylicum (strain ATCC 824 / DSM 792 / JCM 1419 /
LMG 5710 / VKM B-1787) GN=CA_C0523 PE=3 SV=1
Length = 460
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 56/115 (48%), Gaps = 11/115 (9%)
Query: 39 NDATESWYSVTPEKVAQHIASRCK-----ASDVVIDGFCGCGGNTIQFAAVCQKVISIDI 93
N +++S++ V P + + ++ K +VV D +CG G ++ + +KV ++I
Sbjct: 282 NISSKSFFQVNPIQTEKLYSAALKYAGLTGKEVVFDAYCGTGTISLFLSQNAKKVYGVEI 341
Query: 94 DPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSL--QG---DVVFLSPPWGGPE 143
P + A+ NA G+ + +FI G P L +G +VV + PP G E
Sbjct: 342 IPEAIENAKINAKQNGIEN-TEFIVGKSEEEIPKLIEKGIAPEVVVVDPPRKGCE 395
>sp|Q9UY84|TMG10_PYRAB tRNA (guanine(10)-N2)-dimethyltransferase OS=Pyrococcus abyssi
(strain GE5 / Orsay) GN=trmG10 PE=1 SV=2
Length = 329
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/94 (26%), Positives = 45/94 (47%), Gaps = 4/94 (4%)
Query: 50 PEKVAQHIASRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYG 109
P ++A+ + + +A+ ++D F G GG I+ + KV IDI + A+ N YG
Sbjct: 166 PPRIARAMVNLTRATREILDPFMGTGGMLIEAGLMGLKVYGIDIREDMVEGAKINLEYYG 225
Query: 110 VSHKIQFIQGDFFALAPSLQG---DVVFLSPPWG 140
V + + GD + + G + + PP+G
Sbjct: 226 VKDYVVKV-GDATKIKEAFPGKTFEAIATDPPYG 258
>sp|Q99Z86|Y1346_STRP1 Uncharacterized RNA methyltransferase SPy_1346/M5005_Spy1098
OS=Streptococcus pyogenes serotype M1 GN=SPy_1346 PE=3
SV=1
Length = 462
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 41 ATESWY---SVTPEKVAQH-IA-SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDP 95
+ +S+Y +V EK+ Q IA S D+VID + G G + FA + V +++
Sbjct: 288 SAQSFYQVNTVMAEKLYQTAIAFSDLSKDDIVIDAYSGIGTIGLSFAKTVKAVYGVEVIE 347
Query: 96 AKLRLAQHNASVYGVSHKIQFIQGDFFALAP----SLQGDVVFLSPPWGG 141
A +R AQ NA++ G+++ A+A ++ V+ + PP G
Sbjct: 348 AAVRDAQQNAALNGITNAYFVADTAEHAMATWAKDGIKPSVILVDPPRKG 397
>sp|Q8P0H4|Y1360_STRP8 Uncharacterized RNA methyltransferase spyM18_1360 OS=Streptococcus
pyogenes serotype M18 (strain MGAS8232) GN=spyM18_1360
PE=3 SV=1
Length = 462
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 54/110 (49%), Gaps = 9/110 (8%)
Query: 41 ATESWY---SVTPEKVAQH-IA-SRCKASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDP 95
+ +S+Y +V EK+ Q IA S D+VID + G G + FA + V +++
Sbjct: 288 SAQSFYQVNTVMAEKLYQTAIAFSDLSKDDIVIDAYSGIGTIGLSFAKTVKAVYGVEVIE 347
Query: 96 AKLRLAQHNASVYGVSHKIQFIQGDFFALAP----SLQGDVVFLSPPWGG 141
A +R AQ NA++ G+++ A+A ++ V+ + PP G
Sbjct: 348 AAVRDAQQNAALNGITNAYFVADTAEHAMATWAKDGIKPSVILVDPPRKG 397
>sp|A4SRC5|RLMD_AERS4 23S rRNA (uracil(1939)-C(5))-methyltransferase RlmD OS=Aeromonas
salmonicida (strain A449) GN=rlmD PE=3 SV=1
Length = 439
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 66/149 (44%), Gaps = 16/149 (10%)
Query: 32 LTLADADNDATESWYSVTPEKVAQHIA-SRCKASDVVIDGFCGCGGNTIQFAAVCQKVIS 90
L+LA A D + + VAQ +A D V+D FCG G T+ A ++V+
Sbjct: 262 LSLAFAPGDFIQVNGPINQSMVAQALAWLGASKDDKVLDLFCGIGNFTLPLARQAREVVG 321
Query: 91 IDIDPAKLRLAQHNASVYGVSHKIQFIQGDFFALAPSLQGDVVFLSPPWGGPEYARSSFS 150
++ D A + A+ NA G+ + +F + D L GD+V +S +AR F
Sbjct: 322 VEGDLAMVARAEENARRNGIDNA-RFYKAD-------LSGDIVGMS-------WAREGFD 366
Query: 151 IDNIFPEQGGGRRLFQVARGISPNVGYYL 179
+ + P + G + +SP Y+
Sbjct: 367 LVLLDPARPGALEVMGHVVKLSPKRVVYV 395
>sp|A5UJR5|CBIT_METS3 Probable cobalt-precorrin-6Y C(15)-methyltransferase
[decarboxylating] OS=Methanobrevibacter smithii (strain
PS / ATCC 35061 / DSM 861) GN=cbiT PE=3 SV=1
Length = 187
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 30/55 (54%)
Query: 64 SDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQ 118
+D V+D CG GG T +FA +KV SID +P + + + N + + ++ I
Sbjct: 34 NDEVVDVGCGTGGITCEFAQRAKKVTSIDTNPDAISVTKQNLEKFNLGDNVELIN 88
>sp|Q891A0|Y2481_CLOTE Uncharacterized RNA methyltransferase CTC_02481 OS=Clostridium
tetani (strain Massachusetts / E88) GN=CTC_02481 PE=3
SV=1
Length = 460
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 42/87 (48%), Gaps = 6/87 (6%)
Query: 62 KASDVVIDGFCGCGGNTIQFAAVCQKVISIDIDPAKLRLAQHNASVYGVSHKIQFIQGDF 121
K +VV D +CG G ++ + +KV ++I + A+ NA V + + FI G+
Sbjct: 307 KGDEVVFDAYCGTGTISLFLSQKAKKVYGVEIVNEAIESAKLNARENNVDN-VDFIVGES 365
Query: 122 FALAPSL-----QGDVVFLSPPWGGPE 143
+ P L + DVV + PP G E
Sbjct: 366 EQIIPELIEKGIKADVVVVDPPRKGCE 392
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.320 0.137 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 72,248,092
Number of Sequences: 539616
Number of extensions: 2916109
Number of successful extensions: 8184
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 199
Number of HSP's successfully gapped in prelim test: 340
Number of HSP's that attempted gapping in prelim test: 7946
Number of HSP's gapped (non-prelim): 549
length of query: 189
length of database: 191,569,459
effective HSP length: 111
effective length of query: 78
effective length of database: 131,672,083
effective search space: 10270422474
effective search space used: 10270422474
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)