BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13207
(197 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q5RAN6|SEH1_PONAB Nucleoporin SEH1 OS=Pongo abelii GN=SEH1L PE=2 SV=1
Length = 360
Score = 177 bits (450), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 129/208 (62%), Gaps = 41/208 (19%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHK-----------------------D 107
C SC++WN S SR +S I++ + S NA K D
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTD 220
Query: 108 LIHDVAY------DYYGLRMATCSSDQNI--------KVTRDVMGTRFDIETIGNFEDHY 153
+HD+A+ ++ L +AT D I ++T T+F+I + +F++H
Sbjct: 221 PVHDIAFAPNLGRSFHILAIAT--KDVRIFTLKPVRKELTSSGGPTKFEIHIVAHFDNHN 278
Query: 154 CTVWRVSWNITGTIVASSGDDGCVRLWK 181
VWRVSWNITGT++ASSGDDGCVRLWK
Sbjct: 279 SQVWRVSWNITGTVLASSGDDGCVRLWK 306
Score = 70.5 bits (171), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 95 MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKV-TRDVMGTRFDIETIGNFEDHY 153
M+ A SI A+HKDLIHDV++D++G RMATCSSDQ++KV + G D +++ H
Sbjct: 1 MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESG---DWHCTASWKTHS 57
Query: 154 CTVWRVSWNIT--GTIVASSGDDGCVRLWK 181
+VWRV+W G ++AS D +W+
Sbjct: 58 GSVWRVTWAHPEFGQVLASCSFDRTAAVWE 87
>sp|Q96EE3|SEH1_HUMAN Nucleoporin SEH1 OS=Homo sapiens GN=SEH1L PE=1 SV=3
Length = 360
Score = 177 bits (450), Expect = 3e-44, Method: Compositional matrix adjust.
Identities = 98/208 (47%), Positives = 128/208 (61%), Gaps = 41/208 (19%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHK-----------------------D 107
C SC++WN S SR +S I++ + S NA K D
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLMTVTD 220
Query: 108 LIHDVAY------DYYGLRMATCSSDQNI--------KVTRDVMGTRFDIETIGNFEDHY 153
+HD+A+ ++ L +AT D I ++T T+F+I + F++H
Sbjct: 221 PVHDIAFAPNLGRSFHILAIAT--KDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHN 278
Query: 154 CTVWRVSWNITGTIVASSGDDGCVRLWK 181
VWRVSWNITGT++ASSGDDGCVRLWK
Sbjct: 279 SQVWRVSWNITGTVLASSGDDGCVRLWK 306
Score = 70.9 bits (172), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 95 MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKV-TRDVMGTRFDIETIGNFEDHY 153
M+ A SI A+HKDLIHDV++D++G RMATCSSDQ++KV + G D +++ H
Sbjct: 1 MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESG---DWHCTASWKTHS 57
Query: 154 CTVWRVSWNIT--GTIVASSGDDGCVRLWK 181
+VWRV+W G ++AS D +W+
Sbjct: 58 GSVWRVTWAHPEFGQVLASCSFDRTAAVWE 87
>sp|A7YY75|SEH1_BOVIN Nucleoporin SEH1 OS=Bos taurus GN=SEH1L PE=2 SV=1
Length = 360
Score = 176 bits (447), Expect = 7e-44, Method: Compositional matrix adjust.
Identities = 97/208 (46%), Positives = 128/208 (61%), Gaps = 41/208 (19%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHK-----------------------D 107
C SC++WN S SR ++ I++ + S NA K D
Sbjct: 161 CKLSCSCISWNPSSSRAHAPMIAVGSDDSSPNAMAKVQIFEYNENTRKYAKAETLLTVTD 220
Query: 108 LIHDVAY------DYYGLRMATCSSDQNI--------KVTRDVMGTRFDIETIGNFEDHY 153
+HD+A+ ++ L +AT D I ++T T+F+I + F++H
Sbjct: 221 PVHDIAFAPNLGRSFHILAIAT--KDVRIFTLKPVRKELTSSGGPTKFEIHIVAQFDNHN 278
Query: 154 CTVWRVSWNITGTIVASSGDDGCVRLWK 181
VWRVSWNITGT++ASSGDDGCVRLWK
Sbjct: 279 SQVWRVSWNITGTVLASSGDDGCVRLWK 306
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 95 MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC 154
M+ A SI A+HKDLIHDV++D++G RMATCSSDQ++KV + +++ H
Sbjct: 1 MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESGEW--HCTASWKTHSG 58
Query: 155 TVWRVSWNIT--GTIVASSGDDGCVRLWK 181
+VWRV+W G ++AS D +W+
Sbjct: 59 SVWRVTWAHPEFGQVLASCSFDRTAAVWE 87
>sp|Q8R2U0|SEH1_MOUSE Nucleoporin SEH1 OS=Mus musculus GN=Seh1l PE=2 SV=1
Length = 360
Score = 174 bits (442), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 125/206 (60%), Gaps = 37/206 (17%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VR+YEAPDVMNLSQW LQHEV+
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRVYEAPDVMNLSQWSLQHEVS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHK-----------------------D 107
C SC++WN S SR + I++ + S N+ K D
Sbjct: 161 CKLCCSCISWNPSSSRAHPPMIAVGSDDSSPNSMAKVQIFEYNENTRKYAKAETLMTVTD 220
Query: 108 LIHDVAYDYYGLR----MATCSSDQNI--------KVTRDVMGTRFDIETIGNFEDHYCT 155
+HD+A+ R +A + D I ++T T+F+I + F++H
Sbjct: 221 PVHDIAFAPNLGRSFHILAVATKDVRIFTLKPLRKELTSSGGPTKFEIHIVAQFDNHNSQ 280
Query: 156 VWRVSWNITGTIVASSGDDGCVRLWK 181
VWRVSWNITGT++ASSGDDGCVRLWK
Sbjct: 281 VWRVSWNITGTVLASSGDDGCVRLWK 306
Score = 70.9 bits (172), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 57/90 (63%), Gaps = 6/90 (6%)
Query: 95 MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKV-TRDVMGTRFDIETIGNFEDHY 153
M+ A SI A+HKDLIHDV++D++G RMATCSSDQ++KV + G D +++ H
Sbjct: 1 MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESG---DWHCTASWKTHS 57
Query: 154 CTVWRVSWNIT--GTIVASSGDDGCVRLWK 181
+VWRV+W G ++AS D +W+
Sbjct: 58 GSVWRVTWAHPEFGQVLASCSFDRTAAVWE 87
>sp|Q4FZW5|SEH1A_XENLA Nucleoporin seh1-A OS=Xenopus laevis GN=seh1l-a PE=2 SV=1
Length = 360
Score = 172 bits (435), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 124/206 (60%), Gaps = 37/206 (17%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHK-----------------------D 107
C SC++WN S SR +S I++ + S N K D
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNIMGKVQIYEYNENTRKYAKAETLMSVSD 220
Query: 108 LIHDVAYDYYGLR----MATCSSDQNIKVTRDVMG--------TRFDIETIGNFEDHYCT 155
+HD+A+ R +A + D I + + T+F+I T+ F++H
Sbjct: 221 PVHDIAFAPNLGRSFHILAVATKDVRIFTMKPLRKELSSSGGVTKFEIHTVAQFDNHNSQ 280
Query: 156 VWRVSWNITGTIVASSGDDGCVRLWK 181
VWRVSWNITGT++ASSGDDG VRLWK
Sbjct: 281 VWRVSWNITGTVLASSGDDGTVRLWK 306
Score = 69.3 bits (168), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 57/95 (60%), Gaps = 16/95 (16%)
Query: 95 MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN------ 148
M+ A SI A+HKDLIHDV++D++G RMATCSSDQ++KV +D GN
Sbjct: 1 MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKV--------WDKSENGNWHCTAS 52
Query: 149 FEDHYCTVWRVSWNIT--GTIVASSGDDGCVRLWK 181
++ H +VWRV+W G ++AS D +W+
Sbjct: 53 WKTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWE 87
>sp|Q5U4Y8|SEH1_XENTR Nucleoporin seh1 OS=Xenopus tropicalis GN=seh1l PE=2 SV=1
Length = 360
Score = 172 bits (435), Expect = 2e-42, Method: Compositional matrix adjust.
Identities = 95/206 (46%), Positives = 124/206 (60%), Gaps = 37/206 (17%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHK-----------------------D 107
C SC++WN S SR +S I++ + S N K D
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNIMGKVQIYEYNENTRKYAKAETLMSVSD 220
Query: 108 LIHDVAYDYYGLR----MATCSSDQNIKVTRDVMG--------TRFDIETIGNFEDHYCT 155
+HD+A+ R +A + D I + + T+F+I T+ F++H
Sbjct: 221 PVHDIAFAPNLGRSFHILAVATKDVRIFTMKPLRKELSSSGGVTKFEIHTVAQFDNHNSQ 280
Query: 156 VWRVSWNITGTIVASSGDDGCVRLWK 181
VWRVSWNITGT++ASSGDDG VRLWK
Sbjct: 281 VWRVSWNITGTVLASSGDDGTVRLWK 306
Score = 70.1 bits (170), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 95 MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC 154
M+ A SI A+HKDLIHDV++D++G RMATCSSDQ++KV D +++ H
Sbjct: 1 MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDK--SENGDWHCTASWKTHSG 58
Query: 155 TVWRVSWNIT--GTIVASSGDDGCVRLWK 181
+VWRV+W G ++AS D +W+
Sbjct: 59 SVWRVTWAHPEFGQVLASCSFDRTAAVWE 87
>sp|Q6GNF1|SEH1B_XENLA Nucleoporin seh1-B OS=Xenopus laevis GN=seh1l-b PE=2 SV=1
Length = 360
Score = 169 bits (427), Expect = 1e-41, Method: Compositional matrix adjust.
Identities = 94/206 (45%), Positives = 123/206 (59%), Gaps = 37/206 (17%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHK-----------------------D 107
C SC++WN S SR +S I++ + S N K D
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNIMGKVQIYEYNENTRKYAKAETLMSVSD 220
Query: 108 LIHDVAYDYYGLR----MATCSSDQNIKVTRDVMG--------TRFDIETIGNFEDHYCT 155
+HD+A+ R +A + D I + + T+F+ T+ F++H
Sbjct: 221 PVHDIAFAPNLGRSFHILAVATKDVRIFTMKPLRKELSSSGGVTKFENHTVAQFDNHNSQ 280
Query: 156 VWRVSWNITGTIVASSGDDGCVRLWK 181
VWRVSWNITGT++ASSGDDG VRLWK
Sbjct: 281 VWRVSWNITGTVLASSGDDGTVRLWK 306
Score = 68.9 bits (167), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 55/89 (61%), Gaps = 4/89 (4%)
Query: 95 MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC 154
M+ A SI A+HKDLIHDV++D++G RMATCSSDQ++KV + +++ H
Sbjct: 1 MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSENVNW--HCTASWKTHSG 58
Query: 155 TVWRVSWNIT--GTIVASSGDDGCVRLWK 181
+VWRV+W G ++AS D +W+
Sbjct: 59 SVWRVTWAHPEFGQVLASCSFDRTAAVWE 87
>sp|C1BK83|SEH1_OSMMO Nucleoporin seh1 OS=Osmerus mordax GN=seh1l PE=2 SV=1
Length = 364
Score = 167 bits (424), Expect = 3e-41, Method: Compositional matrix adjust.
Identities = 92/211 (43%), Positives = 122/211 (57%), Gaps = 40/211 (18%)
Query: 9 EKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQ 68
++ L+ W +R+ LVDSRTSVTDVKF PK +GL+L TC+ADG+VRIYEAPDVMNLSQW LQ
Sbjct: 97 QRGLSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQ 156
Query: 69 HEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHK---------------------- 106
HE++C SC++WN S SR +S I + N +
Sbjct: 157 HEISCKLSCSCISWNPSSSRAHSPMIAVGSDDSNTAYSGKVQIYEYVENTRKYAKVETLM 216
Query: 107 ---DLIHDVAY------DYYGLRMATCSSDQNI-------KVTRDVMGTRFDIETIGNFE 150
D +HD+A+ ++ L +AT D I K + T+ +++ F+
Sbjct: 217 TVTDPVHDIAFAPNLGRSFHVLAIAT--KDVRIFKLIPMRKESSSSGPTKLEVQLQAQFD 274
Query: 151 DHYCTVWRVSWNITGTIVASSGDDGCVRLWK 181
H VWRVSWNIT T++ASSGDDGCVRLWK
Sbjct: 275 GHNSQVWRVSWNITSTLLASSGDDGCVRLWK 305
Score = 70.9 bits (172), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Query: 95 MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC 154
M+ A SI A+HKDLIHDV+YD++G RMATCSSDQ++KV ++ +++ H
Sbjct: 1 MFVARSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDKSDNGEWNC--TASWKTHSG 58
Query: 155 TVWRVSWNIT--GTIVASSGDDGCVRLWK 181
+VWRV+W G ++AS D +W+
Sbjct: 59 SVWRVTWAHPEFGQVLASCSFDRTAAVWE 87
>sp|Q6TGU2|SEH1_DANRE Nucleoporin seh1 OS=Danio rerio GN=seh1l PE=2 SV=2
Length = 364
Score = 167 bits (424), Expect = 4e-41, Method: Compositional matrix adjust.
Identities = 88/214 (41%), Positives = 123/214 (57%), Gaps = 45/214 (21%)
Query: 9 EKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQ 68
++ + W +R+ LVDSRTSVTDVKF PK +GL+L TC+ADG+VRIYEAPDVMNLSQW LQ
Sbjct: 97 QRGQSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQ 156
Query: 69 HEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHK---------------------- 106
HE++C SC++WN S SR + I N +
Sbjct: 157 HEISCKLACSCISWNPSSSRAHPPMIAVGGDDSNGAYSGKVQIHEYNENTRKYAKAETLM 216
Query: 107 ---DLIHDVAY------DYYGLRMATCSSDQNIKVTR----------DVMGTRFDIETIG 147
D +HD+A+ ++ L +AT +++++ + T+F+++ +
Sbjct: 217 TVTDPVHDIAFAPNLGRSFHVLAIAT----KDVRIFKLLPLRRESANSSGPTKFEVQVMA 272
Query: 148 NFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWK 181
F+ H VWRVSWNIT T++ASSGDDGCVRLWK
Sbjct: 273 QFDSHNSQVWRVSWNITSTLLASSGDDGCVRLWK 306
Score = 72.0 bits (175), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 56/89 (62%), Gaps = 4/89 (4%)
Query: 95 MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC 154
M+ A SI A+HKDLIHDV+YD++G RMATCSSDQ++KV G + +++ H
Sbjct: 1 MFVAKSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVWDK--GDDGEWHCTASWKTHSG 58
Query: 155 TVWRVSWNIT--GTIVASSGDDGCVRLWK 181
+VWRV+W G ++AS D +W+
Sbjct: 59 SVWRVTWAHPEFGQVLASCSFDRTAAVWE 87
>sp|Q10099|SEH1_SCHPO Nucleoporin seh1 OS=Schizosaccharomyces pombe (strain 972 / ATCC
24843) GN=seh1 PE=1 SV=1
Length = 339
Score = 101 bits (252), Expect = 3e-21, Method: Compositional matrix adjust.
Identities = 74/219 (33%), Positives = 109/219 (49%), Gaps = 54/219 (24%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC- 73
W + L+D+R++V D+ F P Q G LA +AD +RIYEA + NL+ W L +E+A
Sbjct: 101 WVEVAKLMDARSAVLDISFCPFQHGCKLAAVSADATLRIYEAMEPGNLTYWTLMNEIALM 160
Query: 74 PTLAS-------CLTWNHSFSRFNSISI-------MYEAHSIN-----AE---HKDLIHD 111
P+ S C+ W S R I++ +Y+ +S AE H DLI D
Sbjct: 161 PSPPSRNEQPAFCVNWCPSRWREQYIAVGCMNDAYIYKQNSHGKWKKVAELPGHTDLIRD 220
Query: 112 VAY------DYYGLRMATCSSDQNIKVTR------DVMGTRFD----------------- 142
+ + YY +AT D N+++ + +V D
Sbjct: 221 ICWAPSMGSSYY--LIATACKDGNVRIFKVETLCEEVFQEEEDAGNSMTEDSNFNLNSLK 278
Query: 143 IETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWK 181
+E IG +++H C VWR +N+TGTI++SSGDDGCVRLWK
Sbjct: 279 VELIGEYDNHKCQVWRCRFNVTGTILSSSGDDGCVRLWK 317
Score = 50.1 bits (118), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 52/98 (53%), Gaps = 9/98 (9%)
Query: 98 AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIET---IGNFEDHYC 154
A +I H+DL++DV YD+YG RM +CS+DQ +K V D ET +
Sbjct: 6 ATTIQTNHQDLVNDVTYDFYGRRMVSCSADQRVK----VYDFNDDTETWAITSEWRAGDA 61
Query: 155 TVWRVSWNIT--GTIVASSGDDGCVRLWKLKKKRKKKK 190
++ RV+W G ++A D VR+++ +KK + K
Sbjct: 62 SLMRVAWAHPSFGQVLAVCSLDRGVRIYEEQKKNFESK 99
>sp|O45933|SEH1_CAEEL Nucleoporin SEH1 OS=Caenorhabditis elegans GN=npp-18 PE=3 SV=1
Length = 363
Score = 92.4 bits (228), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 69/224 (30%), Positives = 107/224 (47%), Gaps = 50/224 (22%)
Query: 6 LQSEKCL----NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMN 61
++SEK L +QW RR+ + D+R+ VTD+ F P+ LGL++A+C G VRIYEAPD+++
Sbjct: 96 VRSEKDLKQKESQWIRRTIISDNRSDVTDICFSPRHLGLMMASCNVLGTVRIYEAPDIVD 155
Query: 62 LSQWCLQHEV-ACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHK-------------- 106
S+W L HE+ A T C+TW S SR + I + AE+K
Sbjct: 156 ASRWNLIHELQAFHTRCGCVTW--SLSRMHRPLIAVGSDEKKAENKKRVVIYENIDGLRK 213
Query: 107 -----DLIHDVAYDYYGLR-----------MATCSSD---QNIKVTRDVMGTRFDIETIG 147
L+ D+ L+ +A S D NIKV R + +E
Sbjct: 214 WQRINSLVFDLPCPITDLKFSPISMVDSHQLAVASGDVHVYNIKVARSAILEEDGVENPI 273
Query: 148 NFEDH----------YCTVWRVSWNITGTIVASSGDDGCVRLWK 181
D+ + WR+ +N+ G++++S+ DG +R WK
Sbjct: 274 QLADYNLIKVALLGDHRKAWRLRYNLMGSVISSTSLDGTLRSWK 317
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/99 (33%), Positives = 52/99 (52%), Gaps = 16/99 (16%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED------HYCTVWR 158
H+DLIH V++D +G RMATC+SD + + +D + GN+ H VWR
Sbjct: 16 HRDLIHCVSFDPHGRRMATCASDMTMAI--------WDRKPDGNWRRSAHWKCHGGAVWR 67
Query: 159 VSWNIT--GTIVASSGDDGCVRLWKLKKKRKKKKEEEEE 195
V W G IVA+ D + +W+ + R +K +++E
Sbjct: 68 VIWAHPEFGQIVATCSYDRTIVIWEEQIVRSEKDLKQKE 106
>sp|A8WVD2|SEH1_CAEBR Nucleoporin SEH1 OS=Caenorhabditis briggsae GN=npp-18 PE=3 SV=1
Length = 366
Score = 87.8 bits (216), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 64/211 (30%), Positives = 101/211 (47%), Gaps = 42/211 (19%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV- 71
+QW RR+ + D+R+ VTD+ F P+ LGL LA+C G VRIYEAPDV++ S+W L HE+
Sbjct: 110 SQWIRRTIISDNRSDVTDICFSPRHLGLSLASCNVLGAVRIYEAPDVVDASRWNLIHELQ 169
Query: 72 ACPTLASCLTWNHSFSRFNSIS--------------IMYE----------AHSINAEHKD 107
A T C+TW+ S I+ ++YE HS+ +
Sbjct: 170 AFHTRCGCVTWSLSRMHRPLIAVGSDEKKAGGKERVVIYENIDGLRKWQRIHSLVFDMPC 229
Query: 108 LIHDVAYDYYGL----RMATCSSDQ---NIKVTRDVMGTRFDIETIGNFEDHYCT----- 155
I D+ + + ++A S D NIKV R + ++ + D+
Sbjct: 230 PITDLKFSPISMVDSHQLAIASGDVHVFNIKVPRTAILEEDGVDNPIHLADYSFQRVALL 289
Query: 156 -----VWRVSWNITGTIVASSGDDGCVRLWK 181
WR+ +N+ G+++ S+ DG +R WK
Sbjct: 290 GDQRKAWRIRYNLIGSVITSTSLDGTLRSWK 320
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 50/101 (49%), Gaps = 16/101 (15%)
Query: 97 EAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED----- 151
E + H+DLIH V++D +G RMATC+SD + + +D + GN+
Sbjct: 11 EPYKTVGAHRDLIHCVSFDPHGRRMATCASDMTMAI--------WDRQPDGNWRRSAHWK 62
Query: 152 -HYCTVWRVSWNIT--GTIVASSGDDGCVRLWKLKKKRKKK 189
H VWRV W G IVAS D + +W+ + R +K
Sbjct: 63 CHGGAVWRVIWAHPEFGQIVASCSYDRTIVIWEEQIVRTEK 103
>sp|P53011|SEH1_YEAST Nucleoporin SEH1 OS=Saccharomyces cerevisiae (strain ATCC 204508 /
S288c) GN=SEH1 PE=1 SV=1
Length = 349
Score = 82.0 bits (201), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 69/247 (27%), Positives = 103/247 (41%), Gaps = 72/247 (29%)
Query: 5 PLQSEKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQ 64
P Q E +W + L DS+ S+ VKF P LGL LA DG++R+Y+A + +L
Sbjct: 88 PDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRS 147
Query: 65 WCLQHEVACPTLAS--------CLTWNHSFSRFN----SISIMYEA----------HSIN 102
W L E+ ++ CL+W SRF+ ++S + +A +
Sbjct: 148 WTLTSEMKVLSIPPANHLQSDFCLSW--CPSRFSPEKLAVSALEQAIIYQRGKDGKLHVA 205
Query: 103 AE---HKDLIHDVAYD-----YYGLRMATCSS---------------------------D 127
A+ HK LI +++ +Y L C D
Sbjct: 206 AKLPGHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNMFD 265
Query: 128 QNIKVTRDVMG-------------TRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD 174
+ V D G + +E + +DH VW VSWN+TGTI++S+GDD
Sbjct: 266 NSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDD 325
Query: 175 GCVRLWK 181
G VRLWK
Sbjct: 326 GKVRLWK 332
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 32/83 (38%), Positives = 49/83 (59%), Gaps = 3/83 (3%)
Query: 101 INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160
++ H DL+HDV YD+YG +ATCSSDQ+IKV + T + E ++ H ++ +
Sbjct: 4 FDSGHDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTS-NWELSDSWRAHDSSIVAID 62
Query: 161 WNIT--GTIVASSGDDGCVRLWK 181
W G I+AS+ D V+LW+
Sbjct: 63 WASPEYGRIIASASYDKTVKLWE 85
>sp|A5DXE2|SEC13_LODEL Protein transport protein SEC13 OS=Lodderomyces elongisporus
(strain ATCC 11503 / CBS 2605 / JCM 1781 / NBRC 1676 /
NRRL YB-4239) GN=SEC13 PE=3 SV=1
Length = 304
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 54/91 (59%), Gaps = 4/91 (4%)
Query: 100 SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159
+I H+DLIHD DYYG R+ATCSSD+ IK+ D+ GT + + H +W+V
Sbjct: 3 TIGNAHEDLIHDAVLDYYGKRLATCSSDKTIKI-YDIEGTE-NYKLTATLTGHEGPIWQV 60
Query: 160 SWNIT--GTIVASSGDDGCVRLWKLKKKRKK 188
+W G+I+AS DG V +WK ++ ++
Sbjct: 61 AWAHPKFGSILASCSYDGKVLIWKEQQDTQQ 91
Score = 41.2 bits (95), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 85/220 (38%), Gaps = 45/220 (20%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPD-------------- 58
QW+ + + SV V + P +LG VL ++DG V + + D
Sbjct: 90 QQWSIIAEHTIHQASVNSVSWAPHELGAVLLCTSSDGKVSVVDFNDDGTTSHVIFDAHAI 149
Query: 59 VMNLSQWCL----------------QHE--VACPTLASCLTWNHSFSRFNSISIMYEAHS 100
+N + W QH V C + W ++++ Y +
Sbjct: 150 GVNSASWAPFTAASSTSSKDANTLKQHRRFVTCGSDNLVKIW-----KYDTALETYAEEA 204
Query: 101 INAEHKDLIHDVAYDYYGL---RMATCSSDQNIKV-TRDVMGT-RFDIETIGNFEDHYCT 155
H D + DVA+ L +AT S D + + T+D G + T F D
Sbjct: 205 KLEGHTDWVRDVAWSPSNLVRPYIATASQDCTVLIWTQDKDGKWQSQPLTEEKFPD---V 261
Query: 156 VWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEE 195
WR SW+++G I+A SG D V LWK + K + E E
Sbjct: 262 CWRCSWSLSGNILAVSGGDNKVTLWKENLQGKWESAGEVE 301
>sp|P0CS50|SEC13_CRYNJ Protein transport protein SEC13 OS=Cryptococcus neoformans var.
neoformans serotype D (strain JEC21 / ATCC MYA-565)
GN=SEC13 PE=3 SV=1
Length = 339
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 101 INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160
+ +H+D+IHD DYYG R+ATCSSD+ I++ + G I + H VW+VS
Sbjct: 18 VETQHEDMIHDAQLDYYGKRLATCSSDRTIRIFNVIKGEAKGEPVI--LKGHTAAVWQVS 75
Query: 161 WNIT--GTIVASSGDDGCVRLWK 181
W G+I+AS DG V +WK
Sbjct: 76 WAHPSFGSILASCSYDGRVFIWK 98
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 105 HKDLIHDVAY----DYYGLRMATCSSDQNIKV-TRDVMGTRFD----IETIGNFED-HYC 154
H+D + DVA+ G+ +A+ S D+ + + +R + + + ++ +D H+
Sbjct: 237 HEDWVRDVAWAPNIGLPGMYIASASQDRTVLIHSRPSPSSSWTSAPLLPSLPQSQDPHFP 296
Query: 155 -TVWRVSWNITGTIVASSGDDGCVRLWK 181
VWRVSW++ G ++A S DG V LWK
Sbjct: 297 DAVWRVSWSLAGNVLAVSCGDGKVSLWK 324
>sp|P0CS51|SEC13_CRYNB Protein transport protein SEC13 OS=Cryptococcus neoformans var.
neoformans serotype D (strain B-3501A) GN=SEC13 PE=3
SV=1
Length = 339
Score = 65.9 bits (159), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 4/83 (4%)
Query: 101 INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160
+ +H+D+IHD DYYG R+ATCSSD+ I++ + G I + H VW+VS
Sbjct: 18 VETQHEDMIHDAQLDYYGKRLATCSSDRTIRIFNVIKGEAKGEPVI--LKGHTAAVWQVS 75
Query: 161 WNIT--GTIVASSGDDGCVRLWK 181
W G+I+AS DG V +WK
Sbjct: 76 WAHPSFGSILASCSYDGRVFIWK 98
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 48/88 (54%), Gaps = 11/88 (12%)
Query: 105 HKDLIHDVAY----DYYGLRMATCSSDQNIKV-TRDVMGTRFD----IETIGNFED-HYC 154
H+D + DVA+ G+ +A+ S D+ + + +R + + + ++ +D H+
Sbjct: 237 HEDWVRDVAWAPNIGLPGMYIASASQDRTVLIHSRPSPSSSWTSAPLLPSLPQSQDPHFP 296
Query: 155 -TVWRVSWNITGTIVASSGDDGCVRLWK 181
VWRVSW++ G ++A S DG V LWK
Sbjct: 297 DAVWRVSWSLAGNVLAVSCGDGKVSLWK 324
>sp|Q0CHM0|SEC13_ASPTN Protein transport protein sec13 OS=Aspergillus terreus (strain NIH
2624 / FGSC A1156) GN=sec13 PE=3 SV=1
Length = 309
Score = 65.5 bits (158), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/87 (43%), Positives = 50/87 (57%), Gaps = 15/87 (17%)
Query: 102 NAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIET-----IGNFEDHYCTV 156
N+ H+D+IHD DYYG R+ATCSSD+ IKV F+IE + + H V
Sbjct: 9 NSGHEDMIHDAGLDYYGRRLATCSSDKTIKV--------FEIEGEAHRLVETLKGHEGAV 60
Query: 157 WRVSWNIT--GTIVASSGDDGCVRLWK 181
W V+W GTI+ASS DG V +W+
Sbjct: 61 WCVAWAHPKFGTILASSSYDGKVLIWR 87
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 53/218 (24%), Positives = 87/218 (39%), Gaps = 34/218 (15%)
Query: 8 SEKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCL 67
S + WT+ + SV V + P + G +L ++DG V + E D Q
Sbjct: 95 SPAAGSAWTKVFDFSLHTASVNMVSWAPHESGCLLGCASSDGHVSVLEFQDNSWTHQIFH 154
Query: 68 QHEVACPTLA--------SCLTWNHSFSR-----------------FNSISIMYEAHSIN 102
H + +++ S ++ N + +N + Y
Sbjct: 155 AHGMGVNSISWAPAAAPGSLISANPGPGQQRRFVTGGSDNLLKIWDYNPETKTYNLSQTL 214
Query: 103 AEHKDLIHDVAYDYYGLR---MATCSSDQNIKV-TRDVMGTRFDIETIGNFEDHYCTVWR 158
H D + DVA+ L +A+ S D+ +++ T D F+ +WR
Sbjct: 215 EGHSDWVRDVAWSPSILSKSYIASASQDKTVRIWTSDASNPGQWTSQQLEFD---SVLWR 271
Query: 159 VSWNITGTIVASSGDDGCVRLWK--LKKKRKKKKEEEE 194
VSW+ +G I+A SG D V LWK LK + +K K+ EE
Sbjct: 272 VSWSPSGNILAVSGGDNKVSLWKENLKGQWEKVKDIEE 309
>sp|Q7RZF5|SEC13_NEUCR Protein transport protein sec-13 OS=Neurospora crassa (strain ATCC
24698 / 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=sec-13 PE=3 SV=2
Length = 304
Score = 64.7 bits (156), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 5/82 (6%)
Query: 102 NAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSW 161
N+ H D+IHD DYYG R+ATCSSD+ IK+ ++ +ET+ + H VW V+W
Sbjct: 10 NSGHDDMIHDAVLDYYGRRLATCSSDRTIKIFEIEGESQRLVETL---KGHDGAVWSVAW 66
Query: 162 NIT--GTIVASSGDDGCVRLWK 181
G I+AS+G DG V +W+
Sbjct: 67 AHPKYGNILASAGYDGKVLIWR 88
Score = 45.8 bits (107), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/214 (24%), Positives = 88/214 (41%), Gaps = 37/214 (17%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPD-------------VMN 61
W R + + SV V + P + G +LA ++DG V + E D +N
Sbjct: 94 WQRIFDFALHKASVNIVSWSPHEAGCLLACASSDGNVSVLEFKDNSWEHNIFHAHGLGVN 153
Query: 62 LSQWC---LQHEVACPTLASCLTWNHSFSRFNSISIM--------YEAHSINAE----HK 106
W + T N F S +++ + + E H
Sbjct: 154 SVSWAPATTPGSIVSSNPGPGSTGNRRFVTGGSDNLLKIWTFDPATNGYKLEREPLAGHT 213
Query: 107 DLIHDVAYDYYGLR---MATCSSDQNIKV-TRDVMGTRFDIETIGNFEDHYCTVWRVSWN 162
D + DVA+ L+ +A+ S D+ +++ T D + NF+ VWRVSW+
Sbjct: 214 DWVRDVAWSPTVLQKSYIASASQDKTVRIWTSDAANPGEWKCKVLNFD---AAVWRVSWS 270
Query: 163 ITGTIVASSGDDGCVRLWK--LKKKRKKKKEEEE 194
++G ++A+S D+ V LWK LK + + K EE
Sbjct: 271 LSGNVLAASSDNNKVTLWKENLKGEWENVKTIEE 304
>sp|Q6BZX5|SEC13_YARLI Protein transport protein SEC13 OS=Yarrowia lipolytica (strain CLIB
122 / E 150) GN=SEC13 PE=3 SV=1
Length = 298
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 50/89 (56%), Gaps = 5/89 (5%)
Query: 100 SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159
+I H DLIHD DYYG R+ATCSSD+ IK+ +ET+ H VW+V
Sbjct: 3 TIGNTHDDLIHDAVLDYYGKRLATCSSDKTIKIFEIDGDNHKLVETL---RGHEGPVWQV 59
Query: 160 SWNIT--GTIVASSGDDGCVRLWKLKKKR 186
SW G+I+AS+ DG V +W+ + R
Sbjct: 60 SWAHPKFGSIIASASYDGKVFIWREENGR 88
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 78/189 (41%), Gaps = 35/189 (18%)
Query: 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQ-HEV-------ACPTL 76
SV V + P++ G +L ++DG V + E + N H+V A P +
Sbjct: 98 NASVNSVVWAPQEYGPLLLCASSDGNVSVVEFKEGGNCEATTFAAHDVGANSASWAPPAV 157
Query: 77 ASCLTWNHSFSRFNSISIM-------------------YEAHSINAEHKDLIHDVAYDYY 117
+ L + N+I I+ Y + HKD + DVA+
Sbjct: 158 SGSLIQPINGKASNNIRIVTGGCDNLVKIWKYDPSSKTYVIEETLSGHKDWVRDVAWSSS 217
Query: 118 GLR---MATCSSDQNIKVTRDVMGTRFDIETIGN--FEDHYCTVWRVSWNITGTIVASSG 172
L +A+ S D+ + V + + + + F D VW+VSW+++G ++A SG
Sbjct: 218 VLSKSYIASASQDKTVIVWTQEGNQPWKKKLLQDIPFPD---VVWKVSWSLSGNVLAVSG 274
Query: 173 DDGCVRLWK 181
D V LWK
Sbjct: 275 GDNKVTLWK 283
>sp|Q5B563|SEC13_EMENI Protein transport protein sec13 OS=Emericella nidulans (strain FGSC
A4 / ATCC 38163 / CBS 112.46 / NRRL 194 / M139) GN=sec13
PE=3 SV=1
Length = 309
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 48/82 (58%), Gaps = 5/82 (6%)
Query: 102 NAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSW 161
N+ H D+IHD DYYG R+ATCSSD+ IK+ T +ET+ + H VW V W
Sbjct: 9 NSGHDDMIHDAGLDYYGRRLATCSSDKTIKIFEIEGDTHKLVETL---KGHEGPVWCVEW 65
Query: 162 NIT--GTIVASSGDDGCVRLWK 181
GTI+ASS DG V +W+
Sbjct: 66 AHPKFGTILASSSYDGKVLIWR 87
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/211 (25%), Positives = 89/211 (42%), Gaps = 34/211 (16%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACP 74
WT+ + SV + + P + G +LA ++DG V + E D Q H +
Sbjct: 102 WTKVFDFSLHTASVNMISWAPHETGCLLACASSDGHVSVLEFRDNSWTHQIFHAHGMGVN 161
Query: 75 TLA--------SCLTWNHSFSR-----------------FNSISIMYEAHSINAEHKDLI 109
+++ S ++ N + +N + Y A H D +
Sbjct: 162 SISWAPAASPGSLVSSNPGIGQQRRFVTGGSDNLLKIWDYNPETKTYNATQTLEGHSDWV 221
Query: 110 HDVAYDYYGLR---MATCSSDQNIKV-TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITG 165
DVA+ L +A+ S D+ ++V T D + F++ +WRVSW+ +G
Sbjct: 222 RDVAWSPSILSKSYIASASQDKTVRVWTADASNPGQWTSQVLEFDN---VLWRVSWSPSG 278
Query: 166 TIVASSGDDGCVRLWK--LKKKRKKKKEEEE 194
I+A SG D V LWK L+ + +K K+ EE
Sbjct: 279 NILAVSGGDNKVSLWKENLRGQWEKVKDIEE 309
>sp|A2QHM1|SEC13_ASPNC Protein transport protein sec13 OS=Aspergillus niger (strain CBS
513.88 / FGSC A1513) GN=sec13 PE=3 SV=1
Length = 308
Score = 64.7 bits (156), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 102 NAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSW 161
N+ H ++IHD DYYG R+ATCSSD+ IK+ T IET+ + H VW V+W
Sbjct: 8 NSGHDEMIHDAGLDYYGRRLATCSSDKTIKIFEIEGETHRLIETL---KGHEGAVWCVAW 64
Query: 162 NIT--GTIVASSGDDGCVRLWK 181
GTI+ASS DG V +W+
Sbjct: 65 AHPKFGTILASSSYDGKVLIWR 86
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 53/217 (24%), Positives = 89/217 (41%), Gaps = 46/217 (21%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACP 74
WT+ + SV V + P + G +LA ++DG V + E D Q H +
Sbjct: 101 WTKVFDFSLHTASVNMVSWAPHESGCLLACASSDGHVSVLEFRDNSWTHQIFHAHGMGVN 160
Query: 75 TLA--------SCLTWNHSFSR-----------------FNSISIMYEAHSINAEHKDLI 109
+++ S ++ N + +N + Y H D +
Sbjct: 161 SISWAPAAAPGSLISSNPGPGQQRRFVTGGSDNLLKIWDYNPETKTYNNTQTLEGHSDWV 220
Query: 110 HDVAYDYYGLR---MATCSSDQNIKV-TRDV------MGTRFDIETIGNFEDHYCTVWRV 159
DVA+ L +A+ S D+ +++ T D + + +T+ +WRV
Sbjct: 221 RDVAWSPSVLSKSYIASASQDKTVRIWTSDASNPGQWTSQQLEFDTV---------LWRV 271
Query: 160 SWNITGTIVASSGDDGCVRLWK--LKKKRKKKKEEEE 194
SW+ +G I+A SG D V LWK LK + +K K+ EE
Sbjct: 272 SWSPSGNILAVSGGDNKVSLWKENLKGQWEKVKDIEE 308
>sp|Q1DZQ0|SEC13_COCIM Protein transport protein SEC13 OS=Coccidioides immitis (strain RS)
GN=SEC13 PE=3 SV=1
Length = 304
Score = 64.3 bits (155), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/82 (45%), Positives = 49/82 (59%), Gaps = 5/82 (6%)
Query: 102 NAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSW 161
N+ H D+IHD DYYG R+ATCSSD+ IK+ + IET+ + H VW V+W
Sbjct: 7 NSGHDDMIHDAGMDYYGRRLATCSSDKTIKIFELEGDSHRLIETL---KGHEGAVWCVAW 63
Query: 162 NIT--GTIVASSGDDGCVRLWK 181
GTI+ASS DG V +W+
Sbjct: 64 AHPKFGTILASSSYDGKVLIWR 85
Score = 50.1 bits (118), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 55/213 (25%), Positives = 87/213 (40%), Gaps = 34/213 (15%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPD-----------VMN 61
+ W+R + SV V + P +LG VLA ++DG V + E D M
Sbjct: 95 SSWSRVFDFSLHTASVNMVSWAPHELGCVLACASSDGHVSVLEFRDNSWTHQIFHAHGMG 154
Query: 62 LSQWCLQHEVACPTLASCLTWNHSFSRF--------------NSISIMYEAHSINAEHKD 107
++ A ++ S RF N + Y + H
Sbjct: 155 VNSVSWAPAAAPGSVISATPSTGQIRRFVTGGSDNLVKIWDYNPETKTYATSHVLEGHTG 214
Query: 108 LIHDVAYDYYGLR---MATCSSDQNIKV-TRDVMGTRFDIETIGNFEDHYCTVWRVSWNI 163
+ DV++ L +A+ S D+ +++ T D E + + VWRVSW++
Sbjct: 215 WVRDVSWSPSILSRSYIASASQDKTVRIWTSDPSNPN---EWTSHQLEFDAVVWRVSWSL 271
Query: 164 TGTIVASSGDDGCVRLWK--LKKKRKKKKEEEE 194
+G I+A SG D V LWK LK + +K K+ EE
Sbjct: 272 SGNILAVSGGDNKVSLWKENLKGQWEKVKDIEE 304
>sp|O94319|SEC13_SCHPO Protein transport protein sec13 OS=Schizosaccharomyces pombe
(strain 972 / ATCC 24843) GN=sec13 PE=1 SV=1
Length = 297
Score = 64.3 bits (155), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 50/84 (59%), Gaps = 5/84 (5%)
Query: 100 SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159
+++ +H D+IHD DYYG R+ATCSSDQ IKV + +ET+ H VW++
Sbjct: 3 TVDTQHDDMIHDAILDYYGKRLATCSSDQTIKVFSIENNQQTLLETL---RGHSGPVWQL 59
Query: 160 SWNIT--GTIVASSGDDGCVRLWK 181
W GTI+AS+ DG V +W+
Sbjct: 60 GWAHPKFGTILASASYDGHVIVWR 83
Score = 36.2 bits (82), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 84/203 (41%), Gaps = 34/203 (16%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNL-SQWCLQHEVAC 73
W+ + + SV V + P + G +LA ++DG V + E D + ++ HE C
Sbjct: 89 WSELMDHTAHQASVNAVSWAPHEYGALLACASSDGKVSVLEFKDDGSCDTRIFTAHEPGC 148
Query: 74 -------PTLASCLTWNHSFSRF---------NSISIMYEAHSIN--------AEHKDLI 109
P+L+ + + N + I +N A H D
Sbjct: 149 NAVCWSPPSLSGSVVGQSPAAGPKKLATAGCDNLVKIWAFDAGVNNWILEDTLAGHVDWT 208
Query: 110 HDVAY-DYYGLR---MATCSSDQNIKV-TRDVMGTRFDIE-TIGNFEDHYCTVWRVSWNI 163
DVA+ GL +A+ S D+N+ + T++ G T F D WRVSW++
Sbjct: 209 RDVAWAPSVGLTKTYLASASQDKNVFIWTKEGDGPWQKTPLTEEKFPD---IAWRVSWSL 265
Query: 164 TGTIVASSGDDGCVRLWKLKKKR 186
+G I+A S D V L+K + +
Sbjct: 266 SGNILAVSCGDNKVYLFKESQNK 288
>sp|Q04491|SEC13_YEAST Protein transport protein SEC13 OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=SEC13 PE=1 SV=1
Length = 297
Score = 63.9 bits (154), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 48/88 (54%), Gaps = 5/88 (5%)
Query: 101 INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160
I H +LIHD DYYG R+ATCSSD+ IK+ +V G + I H VWRV
Sbjct: 4 IANAHNELIHDAVLDYYGKRLATCSSDKTIKIF-EVEGETHKL--IDTLTGHEGPVWRVD 60
Query: 161 WNIT--GTIVASSGDDGCVRLWKLKKKR 186
W GTI+AS DG V +WK + R
Sbjct: 61 WAHPKFGTILASCSYDGKVLIWKEENGR 88
Score = 39.3 bits (90), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 31/98 (31%), Positives = 49/98 (50%), Gaps = 5/98 (5%)
Query: 88 RFNSISIMYEAHSINAEHKDLIHDVAYDYYGL---RMATCSSDQN-IKVTRDVMGTRFDI 143
++NS + Y S H D + DVA+ L +A+ S D+ I T+D +
Sbjct: 186 KYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWK- 244
Query: 144 ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWK 181
+T+ E +WR SW+++G ++A SG D V LWK
Sbjct: 245 KTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWK 282
>sp|Q5AEF2|SEC13_CANAL Protein transport protein SEC13 OS=Candida albicans (strain SC5314
/ ATCC MYA-2876) GN=SEC13 PE=1 SV=2
Length = 298
Score = 63.9 bits (154), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 100 SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159
+I H DLIHD DYYG R+ATCSSD+ IK+ D+ GT + + I H VW+V
Sbjct: 3 TIGNAHDDLIHDAVLDYYGKRLATCSSDKTIKI-FDLDGTD-NYKLITTLTGHEGPVWQV 60
Query: 160 SWNIT--GTIVASSGDDGCVRLWKLKKKRKK 188
SW G+I+AS DG +WK + + ++
Sbjct: 61 SWAHPKFGSILASCSYDGKALIWKEQPETQQ 91
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 52/211 (24%), Positives = 89/211 (42%), Gaps = 31/211 (14%)
Query: 14 QWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQ-HEVA 72
QW+ + + SV V + P +LG VL ++DG V + + D S H +
Sbjct: 91 QWSIIAEHTVHQASVNSVSWAPHELGAVLLCTSSDGKVSVVDFNDDGTTSHVIFDAHAIG 150
Query: 73 CPT---------------------LASCLTWNHS-FSRFNSISIMYEAHSINAEHKDLIH 110
+ + SC + N + ++++ + Y + H D +
Sbjct: 151 ANSATWAPVSTSSKDSAALKQQRRIVSCGSDNLAKIWKYDAANNTYVEEAKLEGHTDWVR 210
Query: 111 DVAYDYYGL---RMATCSSDQNIKV-TRDVMGT-RFDIETIGNFEDHYCTVWRVSWNITG 165
DVA+ L +AT S D+ + + T+D G + + T F D WR SW+++G
Sbjct: 211 DVAWSPSNLIRSYIATASQDRTVLIWTQDRDGKWQKQLLTEEKFPD---VCWRCSWSLSG 267
Query: 166 TIVASSGDDGCVRLWKLKKKRKKKKEEEEEE 196
I+A SG D V LWK + K + E ++
Sbjct: 268 NILAVSGGDNKVSLWKENLQGKWESAGEVDQ 298
>sp|Q4PCB8|SEC13_USTMA Protein transport protein SEC13 OS=Ustilago maydis (strain 521 /
FGSC 9021) GN=SEC13 PE=3 SV=1
Length = 364
Score = 63.5 bits (153), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/83 (42%), Positives = 47/83 (56%), Gaps = 4/83 (4%)
Query: 101 INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160
I +H+D++HD D+YG R+ATCSSD+ +KV V GT T H VW+V+
Sbjct: 21 IETQHEDMVHDAQLDFYGKRLATCSSDRTVKVFDIVNGTPS--TTAETLHGHQGPVWQVA 78
Query: 161 WN--ITGTIVASSGDDGCVRLWK 181
W G I+AS DG V +WK
Sbjct: 79 WAHPTFGDILASCSYDGKVVIWK 101
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/225 (23%), Positives = 83/225 (36%), Gaps = 64/225 (28%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACP 74
WT+ SV + + P +LG +LA ++DG V + N W + A P
Sbjct: 131 WTKIKEHTLHTASVNSISWAPHELGSILACASSDGNVSVLT---FNNDGTWAVDLVAAHP 187
Query: 75 TLASCLTWNHSF--------------------------SRF------NSISIMYEAHSIN 102
+ ++W + RF N++ I + N
Sbjct: 188 VGCNAVSWAPAVVPGSLISAQSVGANAGAASNGEAKLVKRFASAGCDNTVKIWEFSQEAN 247
Query: 103 --------AEHKDLIHDVAY-DYYGLR---MATCSSDQNIKV-TRD-------------V 136
H D + DVA+ GL +AT S D+ + + T+D +
Sbjct: 248 RFVEVEALQGHSDWVRDVAFAPNVGLPRSYLATASQDRTVLIWTQDSPTAAWSKTALNPI 307
Query: 137 MGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWK 181
+ F D TVWRVSW+++G ++A S DG + LWK
Sbjct: 308 SASAAAGAGSNKFPD---TVWRVSWSVSGNVLAVSCGDGKITLWK 349
>sp|A3LNW3|SEC13_PICST Protein transport protein SEC13 OS=Scheffersomyces stipitis (strain
ATCC 58785 / CBS 6054 / NBRC 10063 / NRRL Y-11545)
GN=SEC13 PE=3 SV=2
Length = 302
Score = 63.5 bits (153), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 52/91 (57%), Gaps = 4/91 (4%)
Query: 100 SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159
+I H DLIHD DYYG R+ATCSSD++I + D+ GT + + H VW+V
Sbjct: 3 TIGNAHNDLIHDAVLDYYGKRLATCSSDKSINIF-DIDGTE-SYKLVSTLTGHDGPVWQV 60
Query: 160 SWNIT--GTIVASSGDDGCVRLWKLKKKRKK 188
SW G+I+AS DG +WK + + ++
Sbjct: 61 SWAHPKFGSILASCSFDGKALIWKEQPETQQ 91
Score = 46.2 bits (108), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/200 (25%), Positives = 81/200 (40%), Gaps = 35/200 (17%)
Query: 14 QWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPD--------------V 59
QW+ + + SV V + P +LG VL ++DG V + + D
Sbjct: 91 QWSIIAEHSVHQASVNSVSWAPHELGAVLLCASSDGKVSVVDFNDDGTTSHVVFDAHAIG 150
Query: 60 MNLSQWCLQHEVACPTL--ASCLTWNHSFS-----------RFNSISIMYEAHSINAEHK 106
N + W P A+ L F ++++ + Y + H
Sbjct: 151 ANSASWAPLSSTPSPNQKDAASLKQQRRFVTCGSDNLAKIWKYDAANNTYVEEARLEGHT 210
Query: 107 DLIHDVAYDYYGL---RMATCSSDQNIKV-TRDVMGT-RFDIETIGNFEDHYCTVWRVSW 161
D + DVA+ L +AT S D+ + + T+D G + + T F D WR SW
Sbjct: 211 DWVRDVAWSPSMLVRTYIATASQDRTVLIWTQDKAGKWQKQLLTEDKFPD---VCWRCSW 267
Query: 162 NITGTIVASSGDDGCVRLWK 181
+++G I+A SG D V LWK
Sbjct: 268 SLSGNILAVSGGDNKVSLWK 287
>sp|Q6FNV4|SC131_CANGA Protein transport protein SEC13-1 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=SEC131 PE=3 SV=1
Length = 298
Score = 63.2 bits (152), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/84 (44%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT 164
H DLIHD DYYG ++ATCSSD+ IK+ +V G + + H VWRV W
Sbjct: 8 HNDLIHDAVLDYYGKKLATCSSDKTIKIF-EVEGESHKL--VDTLVGHEGPVWRVDWAHP 64
Query: 165 --GTIVASSGDDGCVRLWKLKKKR 186
GTI+AS DG V +WK + R
Sbjct: 65 KFGTILASCSYDGKVIIWKEENDR 88
Score = 41.2 bits (95), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/99 (32%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 88 RFNSISIMYEAHSINAEHKDLIHDVAYDYYGL---RMATCSSDQ--NIKVTRDVMGTRFD 142
R+N + Y H D + DVA+ L +A+ S D+ NI D G
Sbjct: 187 RYNPETQSYLVEDTLEGHSDWVRDVAWSPSVLLRSYIASVSQDRTCNIWTQEDNTGPW-- 244
Query: 143 IETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWK 181
++T E+ +WR SW+++G I+A SG D V LWK
Sbjct: 245 VKTQLTPEEFPDVLWRASWSLSGNILAISGGDNKVTLWK 283
>sp|Q6CSZ5|SEC13_KLULA Protein transport protein SEC13 OS=Kluyveromyces lactis (strain
ATCC 8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL
Y-1140 / WM37) GN=SEC13 PE=3 SV=1
Length = 302
Score = 62.4 bits (150), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/84 (41%), Positives = 47/84 (55%), Gaps = 5/84 (5%)
Query: 100 SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159
+IN H +LIHD DYYG R+ATCSSD +K+ +V G + + + H VW+V
Sbjct: 3 TINNAHSELIHDAVLDYYGKRLATCSSDHTVKI-FEVEGETHKL--VDTLQGHEGPVWQV 59
Query: 160 SWNIT--GTIVASSGDDGCVRLWK 181
W G I+AS DG V +WK
Sbjct: 60 DWAHPKFGVILASCSYDGKVLIWK 83
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 31/99 (31%), Positives = 47/99 (47%), Gaps = 7/99 (7%)
Query: 88 RFNSISIMYEAHSINAEHKDLIHDVAYDYYGLR---MATCSSDQN-IKVTRDVMGTRFDI 143
++NS + Y H D + DVA+ L +A+ S D+ I T+D +
Sbjct: 191 KYNSDAATYLLEHTLEGHSDWVRDVAWSPTVLSRSYLASVSQDRTCIIWTQDSKEDTWKK 250
Query: 144 ETIGNFEDHYCTV-WRVSWNITGTIVASSGDDGCVRLWK 181
+ ED + V WR SW+++G I+A S D V LWK
Sbjct: 251 TLLK--EDKFPDVLWRASWSLSGNILALSCGDNTVTLWK 287
>sp|Q9D1M0|SEC13_MOUSE Protein SEC13 homolog OS=Mus musculus GN=Sec13 PE=2 SV=3
Length = 322
Score = 62.0 bits (149), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 58/103 (56%), Gaps = 8/103 (7%)
Query: 92 ISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED 151
+S+M ++++ H+D+IHD DYYG R+ATCSSD+++K+ G + I +
Sbjct: 2 VSVM---NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQI---LIADLRG 55
Query: 152 HYCTVWRVSWN--ITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192
H VW+V+W + G I+AS D V +WK + +K E
Sbjct: 56 HEGPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHE 98
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 105 HKDLIHDVAY-DYYGL---RMATCSSDQNIKV--TRDVMGTRFDIETIGNFEDHYCTVWR 158
H D + DVA+ GL +A+CS D + + D G + + + F D VW
Sbjct: 211 HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFND---VVWH 267
Query: 159 VSWNITGTIVASSGDDGCVRLWK 181
VSW+IT I+A SG D V LWK
Sbjct: 268 VSWSITANILAVSGGDNKVTLWK 290
Score = 31.6 bits (70), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 40/191 (20%)
Query: 39 GLVLATCAADGLVRIYEAPDVMNLSQ-------------W--CLQHEVACPTLASCLTWN 83
G LATC++D V+I+ DV N Q W H + LASC +++
Sbjct: 25 GTRLATCSSDRSVKIF---DVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASC-SYD 80
Query: 84 HSFSRFNSISIMYEAHSINAEHKDLIHDV--AYDYYGLRMATCSSDQNIKVTRDVMGTRF 141
+ + +E ++ H ++ V A YGL +A SSD I + ++
Sbjct: 81 RKVIIWKEENGTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQW 140
Query: 142 DIETIGNFEDHYCTVWRVSWN---ITGTIV--------------ASSGDDGCVRLWKLKK 184
+++ I N C VSW + G+++ AS G D ++LW+ ++
Sbjct: 141 EVKKINNAHTIGCNA--VSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWREEE 198
Query: 185 KRKKKKEEEEE 195
+ K+E++ E
Sbjct: 199 DGQWKEEQKLE 209
>sp|A5DHD9|SEC13_PICGU Protein transport protein SEC13 OS=Meyerozyma guilliermondii
(strain ATCC 6260 / CBS 566 / DSM 6381 / JCM 1539 / NBRC
10279 / NRRL Y-324) GN=SEC13 PE=3 SV=2
Length = 290
Score = 62.0 bits (149), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 51/95 (53%), Gaps = 16/95 (16%)
Query: 100 SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE------DHY 153
+I H +LIHD DYYG R+ATCSSD+ IK+ F++E N++ H
Sbjct: 3 TIANAHDELIHDAVLDYYGKRLATCSSDKTIKI--------FEVEGTENYQLTETLVGHE 54
Query: 154 CTVWRVSWNIT--GTIVASSGDDGCVRLWKLKKKR 186
VW+V+W G+I+AS DG V +WK R
Sbjct: 55 GPVWQVAWAHPKFGSILASCSYDGKVLVWKESPDR 89
Score = 40.4 bits (93), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 44/179 (24%), Positives = 74/179 (41%), Gaps = 26/179 (14%)
Query: 25 RTSVTDVKFGPKQLGLVLATCAADGLVR-------------IYEAPDV-MNLSQWCLQHE 70
+ SV V + P +LG VL ++DG V I+EA + +N + W +
Sbjct: 101 QASVNSVSWAPHELGAVLLCTSSDGRVSVVDFNDDGTSTHIIFEAHKIGVNSASWAPV-D 159
Query: 71 VACPTLASCLTWNHSFSRFNSISIMYEAHSINAE---HKDLIHDVAYDYYGL---RMATC 124
P + + ++ S+ + A+ H D + DV + L +AT
Sbjct: 160 TKSPVRRFVTGGSDNLAKVWSLDASKSTYVEEAKLEGHTDWVRDVCWSPSALVRSYIATA 219
Query: 125 SSDQNIKVTRDVMGTRFDIETIGN--FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWK 181
S D+ + + ++ + + F D WR SW+ +G I+A SG D V LWK
Sbjct: 220 SQDRTVLIWHQDGEGKWQKQKLTEELFPD---VCWRCSWSFSGNILAVSGGDNKVSLWK 275
>sp|Q5XFW8|SEC13_RAT Protein SEC13 homolog OS=Rattus norvegicus GN=Sec13 PE=1 SV=1
Length = 322
Score = 61.6 bits (148), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 99 HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWR 158
++++ H+D+IHD DYYG R+ATCSSD+++K+ G + I + H VW+
Sbjct: 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQI---LIADLRGHEGPVWQ 62
Query: 159 VSWN--ITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192
V+W + G I+AS D V +WK + +K E
Sbjct: 63 VAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHE 98
Score = 44.3 bits (103), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 42/83 (50%), Gaps = 9/83 (10%)
Query: 105 HKDLIHDVAY-DYYGL---RMATCSSDQNIKV--TRDVMGTRFDIETIGNFEDHYCTVWR 158
H D + DVA+ GL +A+CS D + + D G + + + F D VW
Sbjct: 211 HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFND---VVWH 267
Query: 159 VSWNITGTIVASSGDDGCVRLWK 181
VSW+IT I+A SG D V LWK
Sbjct: 268 VSWSITANILAVSGGDNKVTLWK 290
Score = 31.6 bits (70), Expect = 3.9, Method: Compositional matrix adjust.
Identities = 46/191 (24%), Positives = 81/191 (42%), Gaps = 40/191 (20%)
Query: 39 GLVLATCAADGLVRIYEAPDVMNLSQ-------------W--CLQHEVACPTLASCLTWN 83
G LATC++D V+I+ DV N Q W H + LASC +++
Sbjct: 25 GTRLATCSSDRSVKIF---DVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASC-SYD 80
Query: 84 HSFSRFNSISIMYEAHSINAEHKDLIHDV--AYDYYGLRMATCSSDQNIKVTRDVMGTRF 141
+ + +E ++ H ++ V A YGL +A SSD I + ++
Sbjct: 81 RKVIIWKEENGTWEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQW 140
Query: 142 DIETIGNFEDHYCTVWRVSWN---ITGTIV--------------ASSGDDGCVRLWKLKK 184
+++ I N C VSW + G+++ AS G D ++LW+ ++
Sbjct: 141 EVKKINNAHTIGCNA--VSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWREEE 198
Query: 185 KRKKKKEEEEE 195
+ K+E++ E
Sbjct: 199 DGQWKEEQKLE 209
>sp|Q6BIR1|SEC13_DEBHA Protein transport protein SEC13 OS=Debaryomyces hansenii (strain
ATCC 36239 / CBS 767 / JCM 1990 / NBRC 0083 / IGC 2968)
GN=SEC13 PE=3 SV=1
Length = 297
Score = 61.2 bits (147), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 53/91 (58%), Gaps = 4/91 (4%)
Query: 100 SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159
+I H DLIHD DYYG R+ATCSSD+ IK+ +V GT + + + H VW+V
Sbjct: 3 TIGNAHDDLIHDAVLDYYGKRLATCSSDKTIKLF-EVEGTE-NYKLVETLIGHEGPVWQV 60
Query: 160 SWNIT--GTIVASSGDDGCVRLWKLKKKRKK 188
+W G+I+AS DG +WK + + ++
Sbjct: 61 AWAHPKFGSILASCSYDGKALIWKEQPETQQ 91
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 49/214 (22%), Positives = 86/214 (40%), Gaps = 39/214 (18%)
Query: 14 QWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPD--------------V 59
QW+ + + SV V + P +LG +L ++DG V + + D
Sbjct: 91 QWSIIAEHTVHQASVNSVSWAPHELGAILLCTSSDGKVSVVDFNDDGTTSHIIFDAHAIG 150
Query: 60 MNLSQWC--------------LQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEH 105
+N + W ++ V C + W +F+S Y ++ H
Sbjct: 151 VNSASWAPLSNNNTKGKDTNSIRRFVTCGSDNLAKIW-----KFDSSKNAYIEEAVLEGH 205
Query: 106 KDLIHDVAYDYYGL---RMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTV-WRVSW 161
D + DV + L +AT S D+ + + ++ + + E+ + V WR SW
Sbjct: 206 TDWVRDVCWSPSILIRSYIATASQDRTVLIWSQDNNGKWQKQLL--TEEMFPDVCWRCSW 263
Query: 162 NITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEE 195
+++G I+A SG D V LWK + K + E E
Sbjct: 264 SLSGNILAVSGGDNKVSLWKENLQGKWESAGEVE 297
>sp|P53024|SEC13_PICPG Protein transport protein SEC13 OS=Komagataella pastoris (strain
GS115 / ATCC 20864) GN=SEC13 PE=3 SV=3
Length = 289
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 46/85 (54%), Gaps = 7/85 (8%)
Query: 100 SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTR-DVMGTRFDIETIGNFEDHYCTVWR 158
+I H DLIHD DYYG R+ATCSSD+ IK+ D R IG H VW+
Sbjct: 3 TIGNAHDDLIHDAVLDYYGRRLATCSSDKTIKIFEIDGENQRLVETLIG----HEGPVWQ 58
Query: 159 VSWNIT--GTIVASSGDDGCVRLWK 181
V+W G I+AS DG V +WK
Sbjct: 59 VAWAHPKFGVILASCSYDGKVLIWK 83
Score = 47.4 bits (111), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 46/188 (24%), Positives = 78/188 (41%), Gaps = 23/188 (12%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACP 74
W + + + SV V + P + G VL ++DG + I E D L +Q
Sbjct: 89 WNKVAEHSVHQASVNSVSWAPHEYGPVLLCASSDGKISIVEFKDGGALEPIVIQGHAIGV 148
Query: 75 TLASC--LTWNHSFSRF---------------NSISIMYEAHSINAEHKDLIHDVAYDYY 117
AS ++ + RF ++ E + H D + DVA+
Sbjct: 149 NAASWAPISLPDNTRRFVSGGCDNLVKIWRYDDAAKTFIEEEAFQG-HSDWVRDVAWSPS 207
Query: 118 GLR---MATCSSDQNIKV-TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGD 173
L +AT S D+ + + T+D +++ + + E WR SW+++G ++A SG
Sbjct: 208 RLSKSYIATASQDRTVLIWTKDGKSNKWEKQPLTK-EKFPDVCWRASWSLSGNVLAISGG 266
Query: 174 DGCVRLWK 181
D V LWK
Sbjct: 267 DNKVTLWK 274
>sp|Q3ZCC9|SEC13_BOVIN Protein SEC13 homolog OS=Bos taurus GN=SEC13 PE=2 SV=1
Length = 322
Score = 60.8 bits (146), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/101 (34%), Positives = 55/101 (54%), Gaps = 15/101 (14%)
Query: 99 HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIG-----NFEDHY 153
++++ H+D+IHD DYYG R+ATCSSD+++K+ FD+ G + H
Sbjct: 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKI--------FDVRNGGQILVADLRGHE 57
Query: 154 CTVWRVSWN--ITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192
VW+V+W + G I+AS D V +WK + +K E
Sbjct: 58 GPVWQVAWAHPMYGNILASCSYDRKVIIWKEENGTWEKTHE 98
Score = 47.4 bits (111), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/204 (25%), Positives = 76/204 (37%), Gaps = 43/204 (21%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQ-----H 69
W + +SV V + P GL+LA ++DG + + L QW ++ H
Sbjct: 93 WEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLT---YTGLGQWEVKKINNAH 149
Query: 70 EVAC-------PTLASCLTWNHSFSRFNSISIMYEAHSIN-------------------A 103
+ C + L S + N I N
Sbjct: 150 TIGCNAVSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKLWKEEEDGQWKEEQKLE 209
Query: 104 EHKDLIHDVAY-DYYGL---RMATCSSDQNIKV--TRDVMGTRFDIETIGNFEDHYCTVW 157
H D + DVA+ GL +A+CS D + V D G + + + F D VW
Sbjct: 210 AHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVWTCDDASGNTWSPKLLHKFND---VVW 266
Query: 158 RVSWNITGTIVASSGDDGCVRLWK 181
VSW+IT I+A SG D V LWK
Sbjct: 267 HVSWSITANILAVSGGDNKVTLWK 290
Score = 32.0 bits (71), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 50/196 (25%), Positives = 79/196 (40%), Gaps = 50/196 (25%)
Query: 39 GLVLATCAADGLVRIYEAPDVMNLSQ-------------W--CLQHEVACPTLASCLTWN 83
G LATC++D V+I+ DV N Q W H + LASC
Sbjct: 25 GTRLATCSSDRSVKIF---DVRNGGQILVADLRGHEGPVWQVAWAHPMYGNILASC---- 77
Query: 84 HSFSRFNSISIMYEAHSINAEHKDLIHDVAYDY-------YGLRMATCSSDQNIKVTRDV 136
S+ R I E + H+ HD + + YGL +A SSD I +
Sbjct: 78 -SYDR-KVIIWKEENGTWEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYT 135
Query: 137 MGTRFDIETIGNFEDHYCTVWRVSWN---ITGTIV--------------ASSGDDGCVRL 179
+++++ I N C VSW + G+++ AS G D ++L
Sbjct: 136 GLGQWEVKKINNAHTIGCNA--VSWAPAVVPGSLIDQPSGQKPNYIKKFASGGCDNLIKL 193
Query: 180 WKLKKKRKKKKEEEEE 195
WK ++ + K+E++ E
Sbjct: 194 WKEEEDGQWKEEQKLE 209
>sp|P55735|SEC13_HUMAN Protein SEC13 homolog OS=Homo sapiens GN=SEC13 PE=1 SV=3
Length = 322
Score = 60.8 bits (146), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 99 HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWR 158
++++ H+D+IHD DYYG R+ATCSSD+++K+ G + I + H VW+
Sbjct: 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVRNGGQI---LIADLRGHEGPVWQ 62
Query: 159 VSWN--ITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192
V+W + G I+AS D V +W+ + +K E
Sbjct: 63 VAWAHPMYGNILASCSYDRKVIIWREENGTWEKSHE 98
Score = 43.9 bits (102), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 77/201 (38%), Gaps = 37/201 (18%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRI--YEAPDVMNLSQWCLQHEVA 72
W + +SV V + P GL+LA ++DG + + Y + + H +
Sbjct: 93 WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIG 152
Query: 73 C------PTLASCLTWNHS-------FSRF------NSISIMYEAHSINAE-------HK 106
C P + +H RF N I + E + H
Sbjct: 153 CNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLEAHS 212
Query: 107 DLIHDVAY-DYYGL---RMATCSSDQNIKV--TRDVMGTRFDIETIGNFEDHYCTVWRVS 160
D + DVA+ GL +A+CS D + + D + + + F D VW VS
Sbjct: 213 DWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFND---VVWHVS 269
Query: 161 WNITGTIVASSGDDGCVRLWK 181
W+IT I+A SG D V LWK
Sbjct: 270 WSITANILAVSGGDNKVTLWK 290
Score = 33.9 bits (76), Expect = 0.73, Method: Compositional matrix adjust.
Identities = 48/191 (25%), Positives = 81/191 (42%), Gaps = 40/191 (20%)
Query: 39 GLVLATCAADGLVRIYEAPDVMNLSQ-------------W--CLQHEVACPTLASCLTWN 83
G LATC++D V+I+ DV N Q W H + LASC +++
Sbjct: 25 GTRLATCSSDRSVKIF---DVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASC-SYD 80
Query: 84 HSFSRFNSISIMYEAHSINAEHKDLIHDV--AYDYYGLRMATCSSDQNIKVTRDVMGTRF 141
+ + +E +A H ++ V A YGL +A SSD I + ++
Sbjct: 81 RKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQW 140
Query: 142 DIETIGNFEDHYCTVWRVSWN---ITGTIV--------------ASSGDDGCVRLWKLKK 184
+++ I N C VSW + G+++ AS G D ++LWK ++
Sbjct: 141 EVKKINNAHTIGCNA--VSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEE 198
Query: 185 KRKKKKEEEEE 195
+ K+E++ E
Sbjct: 199 DGQWKEEQKLE 209
>sp|Q75BS2|SEC13_ASHGO Protein transport protein SEC13 OS=Ashbya gossypii (strain ATCC
10895 / CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=SEC13
PE=3 SV=1
Length = 295
Score = 59.3 bits (142), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 5/89 (5%)
Query: 100 SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159
+I H +LIHD DYYG R+ATCSSD+ I++ +V G + + + H VW+V
Sbjct: 3 TITNAHTELIHDAVLDYYGKRLATCSSDKTIQIF-EVDGDSHKL--VDSLHGHEGPVWQV 59
Query: 160 SWNIT--GTIVASSGDDGCVRLWKLKKKR 186
W G I+AS DG V +WK + R
Sbjct: 60 DWAHPKFGVILASCSYDGKVLIWKEENGR 88
Score = 40.0 bits (92), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 50/112 (44%), Gaps = 3/112 (2%)
Query: 88 RFNSISIMYEAHSINAEHKDLIHDVAYDYYGLR---MATCSSDQNIKVTRDVMGTRFDIE 144
++N + Y A H D + DVA+ L +AT S D+ + +
Sbjct: 184 KYNPEANTYLLEDTLAAHADWVRDVAWSPSVLPRAYLATVSQDRTCIIWTQENNQGPWTK 243
Query: 145 TIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEEE 196
T+ + +WR SW+++G I+A SG D V LWK + K + E E+
Sbjct: 244 TLLKEDKFPDVLWRASWSLSGNILALSGGDNKVTLWKENLEGKWESAAEIEQ 295
>sp|Q4WNK7|SEC13_ASPFU Protein transport protein sec13 OS=Neosartorya fumigata (strain
ATCC MYA-4609 / Af293 / CBS 101355 / FGSC A1100)
GN=sec13 PE=3 SV=1
Length = 306
Score = 57.8 bits (138), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/76 (46%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 108 LIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT--G 165
L HD DYYG R+ATCSSD+ IK+ T IET+ + H VW V+W G
Sbjct: 12 LQHDAGLDYYGRRLATCSSDKTIKIFEIEGETHRLIETL---KGHEGAVWCVAWAHPKFG 68
Query: 166 TIVASSGDDGCVRLWK 181
TI+ASS DG V +W+
Sbjct: 69 TILASSSYDGKVLIWR 84
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 55/221 (24%), Positives = 88/221 (39%), Gaps = 54/221 (24%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACP 74
WT+ + SV V + P + G +LA ++DG V + E D + W Q A
Sbjct: 99 WTKVFDFSLHTASVNMVSWAPHESGCLLACASSDGHVSVLEFRD----NSWTHQIFHAHG 154
Query: 75 TLASCLTWNHSFSR-----------------------------FNSISIMYEAHSINAEH 105
+ ++W + S +N S Y H
Sbjct: 155 MGVNSISWAPAASPGSLISSNPGPGQQRRFVTGGSDNLLKIWDYNPESKTYNLSQTLEGH 214
Query: 106 KDLIHDVAYDYYGLR---MATCSSDQNIKV-TRDV------MGTRFDIETIGNFEDHYCT 155
D + DVA+ L +A+ S D+ +++ T D + + +T+
Sbjct: 215 SDWVRDVAWSPSILSKSYIASASQDKTVRIWTSDASNPGQWTSQQLEFDTV--------- 265
Query: 156 VWRVSWNITGTIVASSGDDGCVRLWK--LKKKRKKKKEEEE 194
+WRVSW+ +G I+A SG D V LWK LK + +K K+ EE
Sbjct: 266 LWRVSWSPSGNILAVSGGDNKVSLWKENLKGQWEKVKDIEE 306
>sp|A1CGS0|SEC13_ASPCL Protein transport protein sec13 OS=Aspergillus clavatus (strain
ATCC 1007 / CBS 513.65 / DSM 816 / NCTC 3887 / NRRL 1)
GN=sec13 PE=3 SV=1
Length = 295
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 108 LIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT--G 165
+IHD DYYG R+ATCSSD+ IK+ T ET+ + H VW V+W G
Sbjct: 1 MIHDAGLDYYGRRLATCSSDKTIKIFEIEGETHRLAETL---KGHEGAVWCVAWAHPKFG 57
Query: 166 TIVASSGDDGCVRLWK 181
TI+ASS DG V +W+
Sbjct: 58 TILASSSYDGKVLIWR 73
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 55/224 (24%), Positives = 91/224 (40%), Gaps = 46/224 (20%)
Query: 8 SEKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCL 67
S + WT+ + SV V + P + G +LA ++DG V + E D Q
Sbjct: 81 SPAAGSAWTKVFDFSLHTASVNMVSWAPHESGCLLACASSDGHVSVLEFRDNSWTHQIFH 140
Query: 68 QHEVACPTLA--------SCLTWNHSFSR-----------------FNSISIMYEAHSIN 102
H + +++ S ++ N + +N S Y
Sbjct: 141 AHGMGVNSISWAPAAAPGSLISSNPGPGQQRRFVTGGSDNLLKIWDYNPESKTYNITQTL 200
Query: 103 AEHKDLIHDVAYDYYGLR---MATCSSDQNIKV-TRDV------MGTRFDIETIGNFEDH 152
H D + DVA+ L +A+ S D+ +++ T D + + +T+
Sbjct: 201 EGHSDWVRDVAWSPSILSKSYIASASQDKTVRIWTSDASNPGQWTSQQLEFDTV------ 254
Query: 153 YCTVWRVSWNITGTIVASSGDDGCVRLWK--LKKKRKKKKEEEE 194
+WRVSW+ +G I+A SG D V LWK LK + +K K+ EE
Sbjct: 255 ---LWRVSWSPSGNILAVSGGDNKVSLWKENLKGQWEKVKDIEE 295
>sp|Q2GSM6|SEC13_CHAGB Protein transport protein SEC13 OS=Chaetomium globosum (strain ATCC
6205 / CBS 148.51 / DSM 1962 / NBRC 6347 / NRRL 1970)
GN=SEC13 PE=3 SV=1
Length = 290
Score = 57.4 bits (137), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 45/76 (59%), Gaps = 5/76 (6%)
Query: 108 LIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT--G 165
+IHD DYYG R+ATCSSD+ IK+ T+ ET+ + H VW VSW G
Sbjct: 1 MIHDAVLDYYGRRLATCSSDRTIKIFEIEGETQRLTETL---KGHDGAVWCVSWAHPKYG 57
Query: 166 TIVASSGDDGCVRLWK 181
I+AS+G DG V +W+
Sbjct: 58 NILASAGYDGKVLIWR 73
Score = 44.7 bits (104), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 51/201 (25%), Positives = 86/201 (42%), Gaps = 38/201 (18%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPD--------------VM 60
W R + + SV V + P + G VLA ++DG V + E D +
Sbjct: 79 WQRIYDFSLHKASVNVVSWSPHEAGCVLACASSDGNVSVLEFKDNNSWEHSIFHAHGLGV 138
Query: 61 NLSQWCLQHEVACPTLASCLTWNHSFSRF------NSISI-----MYEAHSINAE----H 105
N W + + RF N++ I A+ + E H
Sbjct: 139 NSVSWAPATNPGSIVSSKPSPKSTGNRRFVTGGSDNALKIWAFDAATGAYKLEREPLTGH 198
Query: 106 KDLIHDVAYDYYGLR---MATCSSDQNIKV-TRDVMGTR-FDIETIGNFEDHYCTVWRVS 160
D + DVA+ L+ +A+ S D+ +++ T D + ++ + +G F+ VWRVS
Sbjct: 199 TDWVRDVAWSPTVLQKSYIASASEDRTVRIWTSDPANPQQWNCKVLG-FD---AAVWRVS 254
Query: 161 WNITGTIVASSGDDGCVRLWK 181
W+++G ++A+SG D V LWK
Sbjct: 255 WSLSGNVLAASGGDNKVTLWK 275
>sp|Q54DS8|SEC13_DICDI Protein transport protein SEC13 OS=Dictyostelium discoideum
GN=sec13 PE=3 SV=1
Length = 301
Score = 57.4 bits (137), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 57/203 (28%), Positives = 89/203 (43%), Gaps = 41/203 (20%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRI-------YEAPDVMNLSQW 65
N W+ SV + + P + GL LA ++DG V I +EAP + +SQ
Sbjct: 90 NSWSIIHQYAGHELSVNSISWAPHEFGLSLACASSDGSVTIHNYNNNVWEAPQKIQVSQI 149
Query: 66 CLQH----EVACPT------------------LASCLTWNHSFSRFNSISIMYEAHSINA 103
+ A PT SC ++ F ++ +
Sbjct: 150 GVNSVSWSPAAIPTSLVNSANTIIPAPIKRIVTGSC---DNLIKIFKNVEDKWILDKQLE 206
Query: 104 EHKDLIHDVAY-DYYGL---RMATCSSDQNIKV-TRDVMGTRFDIETIGNFEDHYCTVWR 158
+HKD + DVA+ GL ++A+CS D+++ V T+D G + + + F+D VWR
Sbjct: 207 DHKDWVRDVAWAPNIGLPYSKIASCSQDRSVIVWTQDENGV-WSGKPLPKFDD---IVWR 262
Query: 159 VSWNITGTIVASSGDDGCVRLWK 181
VSW++ G I+A S D V LWK
Sbjct: 263 VSWSVIGNILAVSCGDNQVTLWK 285
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 52/85 (61%), Gaps = 5/85 (5%)
Query: 99 HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWR 158
++++ H+D++HD +DYYG +ATCSSD+ IK+ DV G + + + + H VW+
Sbjct: 4 QNVDSGHEDMVHDAQFDYYGKFLATCSSDKMIKIF-DVGGE--NPQHLVDLRGHEGPVWQ 60
Query: 159 VSWNIT--GTIVASSGDDGCVRLWK 181
V+W G I+AS+ D V +WK
Sbjct: 61 VAWAHPKFGKILASASYDRKVIVWK 85
>sp|A4REK3|SEC13_MAGO7 Protein transport protein SEC13 OS=Magnaporthe oryzae (strain 70-15
/ ATCC MYA-4617 / FGSC 8958) GN=SEC13 PE=3 SV=3
Length = 289
Score = 56.6 bits (135), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 5/76 (6%)
Query: 108 LIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT--G 165
+IHD DYYG R+ATCSSD+ IK+ T ET+ + H VW V+W G
Sbjct: 1 MIHDAVLDYYGRRLATCSSDRTIKIFEVEGETHRLTETL---KGHEGAVWCVAWAHPKYG 57
Query: 166 TIVASSGDDGCVRLWK 181
I+ASSG DG V +W+
Sbjct: 58 NILASSGYDGKVFIWR 73
Score = 40.4 bits (93), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 51/199 (25%), Positives = 86/199 (43%), Gaps = 35/199 (17%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-- 72
W + + + SV V + P + G +LA ++DG V + E D Q L H
Sbjct: 79 WQKIFDFALHKASVNIVSWSPHESGCLLACASSDGHVSVLEFKDNSFDHQTFLAHGQGVN 138
Query: 73 ----CPTLA--SCLTWNHSFS---RF--------------NSISIMY--EAHSINAEHKD 107
P+ A S ++ N + + RF ++ S Y E + + H D
Sbjct: 139 SVSWAPSTAPGSIISTNATPAAQRRFVTGGSDNTLKIWSWDAASAQYRCEEGGVLSGHTD 198
Query: 108 LIHDVAYDYYGLR---MATCSSDQNIKV-TRDVMGTR-FDIETIGNFEDHYCTVWRVSWN 162
+ DV + L+ +A+ S D+ +++ T D + + F+ TVWRVSW+
Sbjct: 199 WVLDVDWSPTVLQKSYIASASQDRTVRIWTSDSSNPGVWQSRVLKEFD---TTVWRVSWS 255
Query: 163 ITGTIVASSGDDGCVRLWK 181
++G ++A S D V LWK
Sbjct: 256 LSGNVLAVSSGDNKVTLWK 274
>sp|Q2UG43|SEC13_ASPOR Protein transport protein sec13 OS=Aspergillus oryzae (strain ATCC
42149 / RIB 40) GN=sec13 PE=3 SV=1
Length = 294
Score = 56.2 bits (134), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/75 (42%), Positives = 44/75 (58%), Gaps = 5/75 (6%)
Query: 109 IHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT--GT 166
+HD DYYG R+ATCSSD+ IK+ T +ET+ + H VW ++W GT
Sbjct: 1 MHDAGLDYYGRRLATCSSDKTIKIFEIEGETHRLVETL---KGHEGAVWCIAWAHPKFGT 57
Query: 167 IVASSGDDGCVRLWK 181
I+ASS DG V +W+
Sbjct: 58 ILASSSYDGKVLIWR 72
Score = 52.8 bits (125), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 58/228 (25%), Positives = 93/228 (40%), Gaps = 54/228 (23%)
Query: 8 SEKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCL 67
S +N WT+ + SV V + P + G +LA ++DG V + E D + W
Sbjct: 80 SPVAVNTWTKVFDFSLHTASVNMVSWAPHESGCLLACASSDGHVSVLEFQD----NSWTH 135
Query: 68 QHEVACPTLASCLTWNHSFSR-----------------------------FNSISIMYEA 98
Q A + ++W + S +NS + Y
Sbjct: 136 QIFHAHGMGVNSISWAPAASPGSLISANPGPGQQRRFVTGGSDNLLKIWDYNSETKSYNL 195
Query: 99 HSINAEHKDLIHDVAYDYYGLR---MATCSSDQNIKV-TRDV------MGTRFDIETIGN 148
H D + DVA+ L +A+ S D+ +++ T DV + + +T+
Sbjct: 196 SQTLEGHSDWVRDVAWSPSILSKSYIASASQDKTVRIWTSDVSNPGQWASQQLEFDTV-- 253
Query: 149 FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWK--LKKKRKKKKEEEE 194
+WRVSW+ +G I+A SG D V LWK LK + +K K+ EE
Sbjct: 254 -------LWRVSWSPSGNILAVSGGDNKVSLWKENLKGQWEKVKDIEE 294
>sp|Q0UNA9|SEC13_PHANO Protein transport protein SEC13 OS=Phaeosphaeria nodorum (strain
SN15 / ATCC MYA-4574 / FGSC 10173) GN=SEC13 PE=3 SV=1
Length = 302
Score = 53.5 bits (127), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 51/94 (54%), Gaps = 5/94 (5%)
Query: 101 INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160
++ E ++ HD DYYG R+ATCSSD+ IK+ +V G + + + H VW V+
Sbjct: 11 LSIEANEVQHDAVLDYYGRRLATCSSDKTIKIF-EVEGDKHTL--VETLRGHEGPVWCVA 67
Query: 161 WNIT--GTIVASSGDDGCVRLWKLKKKRKKKKEE 192
W G I+ASS DG V +W+ + +K E
Sbjct: 68 WAHPKYGNILASSSYDGKVIIWREQSSTWQKIYE 101
Score = 45.1 bits (105), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 43/193 (22%), Positives = 80/193 (41%), Gaps = 51/193 (26%)
Query: 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSF 86
SV V + P ++G +LA ++DG V + E D + W AC + + ++W +
Sbjct: 108 SVNIVAWAPHEVGCLLACASSDGNVSVLEFKD----NAWSHVIFQACGSGVNSVSWAPAV 163
Query: 87 SR------------------------------FNSISIMYEAHSINAEHKDLIHDVAYDY 116
+ F++ + +++ I H D + DVA+
Sbjct: 164 APGQVVSASGNQAGAARRFVTGGSDCQVKLWDFSAETGSWQSTQILTGHTDWVRDVAWSP 223
Query: 117 YGLR---MATCSSDQNIKV-----TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIV 168
L +A+ S D+ +++ RD T +++ + WRVSW+++G ++
Sbjct: 224 TVLSKSYIASASQDKTVRIWTSSDLRDWKSTVLNVDAVA---------WRVSWSLSGNVL 274
Query: 169 ASSGDDGCVRLWK 181
A S D V LWK
Sbjct: 275 AVSTGDNRVSLWK 287
>sp|Q9N4A7|SEC13_CAEEL Protein SEC13 homolog OS=Caenorhabditis elegans GN=npp-20 PE=2 SV=1
Length = 313
Score = 52.0 bits (123), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/96 (34%), Positives = 51/96 (53%), Gaps = 8/96 (8%)
Query: 101 INAEHKDLIHDVAYDYYGLRMATCSSDQNIKV--TRDVMGTRFDIETIGNFEDHYCTVWR 158
I+ +H+D IHD + YG R+ATC SD+ +K+ R + E +G H VW+
Sbjct: 8 IDTQHRDAIHDAQLNIYGSRLATCGSDRLVKIFEVRPNGQSYPMAELVG----HSGPVWK 63
Query: 159 VSWNIT--GTIVASSGDDGCVRLWKLKKKRKKKKEE 192
VSW G ++AS+ D V +W ++ R +K E
Sbjct: 64 VSWAHPKYGGLLASASYDKKVIIWNEQQGRWQKAYE 99
Score = 32.3 bits (72), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 15/41 (36%), Positives = 21/41 (51%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRI 53
+W + S T V F P Q GL+LA+ +ADG + I
Sbjct: 92 GRWQKAYEWAAHEASTTCVAFAPHQYGLMLASASADGDIGI 132
>sp|Q6FQU6|SC132_CANGA Protein transport protein SEC13-2 OS=Candida glabrata (strain ATCC
2001 / CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65)
GN=SEC132 PE=3 SV=1
Length = 303
Score = 51.6 bits (122), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 47/86 (54%), Gaps = 8/86 (9%)
Query: 101 INAEHKDLIHDVAYDYYGLRMATCSSDQNIKV--TRDVMGTRFDIETIGNFEDHYCTVWR 158
I H+ +IH A +YYG R+ATCSSD+ +K+ DV + +ET+ H VW
Sbjct: 4 IENAHEGVIHHAALNYYGTRLATCSSDKTVKIFEINDVNNSSSLLETL---VGHEGPVWY 60
Query: 159 VSW---NITGTIVASSGDDGCVRLWK 181
W ++ ++A+ G DG V +WK
Sbjct: 61 ADWCHPSLGENLLATCGYDGKVLIWK 86
Score = 31.6 bits (70), Expect = 3.5, Method: Compositional matrix adjust.
Identities = 47/189 (24%), Positives = 76/189 (40%), Gaps = 37/189 (19%)
Query: 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQ--HEVACPTL--ASCLTW 82
SV VK+ P + GL+L +ADG + + E D S L H+ ++ A +
Sbjct: 106 SVNCVKWAPHEYGLILLCGSADGKISVVELKDGQIASTKILDNAHKFGVNSISWAPLMKT 165
Query: 83 NHS----------------------FSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGL- 119
+ S +F+ Y HKD + V + L
Sbjct: 166 DSSDDGDETTAVKQFISGGNDNLVKIWKFDDDQETYVVADTLEGHKDAVTAVDWSPTTLL 225
Query: 120 --RMATCSSDQNIKV-TRDVMGTRFDIETI----GNFEDHYCTVWRVSWNITGTIVASSG 172
+A+ S+D+ V T+D + D + I G FE +V SW+++G ++A S
Sbjct: 226 QSYVASVSNDKQCLVWTQDHSSKKNDWKKISVNEGKFEQKLGSV---SWSLSGNLLAVSD 282
Query: 173 DDGCVRLWK 181
DD V +WK
Sbjct: 283 DDKNVTIWK 291
>sp|A8XJ40|SEC13_CAEBR Protein SEC13 homolog OS=Caenorhabditis briggsae GN=npp-20 PE=3
SV=2
Length = 306
Score = 51.2 bits (121), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/102 (32%), Positives = 50/102 (49%), Gaps = 16/102 (15%)
Query: 101 INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN------FEDHYC 154
I+ +H+D IHD + YG R+ATC SD+ +K+ F++ G H
Sbjct: 8 IDTQHRDAIHDAQLNIYGNRLATCGSDRLVKI--------FEVRPNGQSYPLIELSGHNG 59
Query: 155 TVWRVSWNIT--GTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194
VW+VSW G ++AS+ D V +W+ R +K E E
Sbjct: 60 PVWKVSWAHPKYGGLLASASYDKKVIIWQEVNGRWQKTYEWE 101
Score = 42.7 bits (99), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 52/216 (24%), Positives = 82/216 (37%), Gaps = 43/216 (19%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQW------- 65
+W + SVT V F P Q GL+LA+ +ADG + I QW
Sbjct: 92 GRWQKTYEWETHEASVTSVAFAPHQFGLMLASSSADGTIGILRFD--AQTQQWQSSRIQN 149
Query: 66 CLQHEVACPTLASCLTWNHSFSRFNSIS--IMYEAHSINAE------------HKDLIHD 111
C V + A RF S + + +N E HKD + +
Sbjct: 150 CHDQGVNSVSWAPGTADPAGKKRFVSAGNDKLVKIWLLNEELNEWTCEKAIHCHKDFVRE 209
Query: 112 VAY----DYYGLRMATCSSDQNIKVTRDVMGTRFDIETI----GNFEDHYCTVWRVSWNI 163
A+ + + +C D N+ + R DIET E C ++ S++
Sbjct: 210 AAWCPVTNKGQHSIVSCGLDGNLVLYRIA-----DIETAEWKSKLLEQAPCALYHASFSP 264
Query: 164 TGTIVASSGDDGCVRLWK-------LKKKRKKKKEE 192
G+ ++ SGDD + LW+ +K R+ K+ E
Sbjct: 265 CGSFLSVSGDDNMITLWRENLQGQWIKIPRENKERE 300
>sp|Q8BHJ5|TBL1R_MOUSE F-box-like/WD repeat-containing protein TBL1XR1 OS=Mus musculus
GN=Tbl1xr1 PE=2 SV=1
Length = 514
Score = 50.4 bits (119), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 53/193 (27%), Positives = 90/193 (46%), Gaps = 27/193 (13%)
Query: 2 GPSPLQSEKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMN 61
GP+ L C+ + + V S VT + + + G +LAT + DG RI+ N
Sbjct: 205 GPTQLVLRHCIREGGQD---VPSNKDVTSLDWNSE--GTLLATGSYDGFARIWTKDG--N 257
Query: 62 LSQWCLQHEVACPTLASCLTWNHSF-----SRFNSISIMYEAHSINAEHKDLIH-----D 111
L+ QH+ P A L WN + + +I+++AH+ A+ + H D
Sbjct: 258 LASTLGQHK--GPIFA--LKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALD 313
Query: 112 VAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASS 171
V + A+CS+D I V + +G I+T F+ H V + W+ TG ++AS
Sbjct: 314 VDWQSNN-TFASCSTDMCIHVCK--LGQDRPIKT---FQGHTNEVNAIKWDPTGNLLASC 367
Query: 172 GDDGCVRLWKLKK 184
DD +++W +K+
Sbjct: 368 SDDMTLKIWSMKQ 380
>sp|Q4R8H1|TBL1X_MACFA F-box-like/WD repeat-containing protein TBL1X OS=Macaca
fascicularis GN=TBL1X PE=2 SV=1
Length = 569
Score = 49.7 bits (117), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 77/156 (49%), Gaps = 20/156 (12%)
Query: 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRF-----NSIS 93
G +LAT + DG RI+ + NL+ QH+ P A L WN + + +
Sbjct: 292 GTLLATGSYDGFARIWT--EDGNLASTLGQHK--GPIFA--LKWNRKGNYILSAGVDKTT 345
Query: 94 IMYEAHSINAEHKDLIHDV-AYDY---YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF 149
I+++AH+ A+ + H A D + A+CS+D I V R +G ++T F
Sbjct: 346 IIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHVCR--LGCDRPVKT---F 400
Query: 150 EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185
+ H V + W+ +G ++AS DD +++W +K++
Sbjct: 401 QGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQE 436
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 45/92 (48%), Gaps = 20/92 (21%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKV---TRDVMGTRFDIETIGNFEDHYCTVWRVSW 161
H + ++ + +D G+ +A+CS D +K+ ++V I + + H ++ + W
Sbjct: 403 HTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEV--------CIHDLQAHNKEIYTIKW 454
Query: 162 NITGT---------IVASSGDDGCVRLWKLKK 184
+ TG ++AS+ D VRLW +++
Sbjct: 455 SPTGPATSNPNSNIMLASASFDSTVRLWDIER 486
>sp|O60907|TBL1X_HUMAN F-box-like/WD repeat-containing protein TBL1X OS=Homo sapiens
GN=TBL1X PE=1 SV=3
Length = 577
Score = 48.1 bits (113), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/156 (28%), Positives = 76/156 (48%), Gaps = 20/156 (12%)
Query: 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRF-----NSIS 93
G +LAT + DG RI+ + NL+ QH+ P A L WN + + +
Sbjct: 300 GTLLATGSYDGFARIWT--EDGNLASTLGQHK--GPIFA--LKWNRKGNYILSAGVDKTT 353
Query: 94 IMYEAHSINAEHKDLIHDV-AYDY---YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF 149
I+++AH+ A+ + H A D A+CS+D I V R +G ++T F
Sbjct: 354 IIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHVCR--LGCDRPVKT---F 408
Query: 150 EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185
+ H V + W+ +G ++AS DD +++W +K++
Sbjct: 409 QGHTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQE 444
Score = 33.1 bits (74), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/92 (22%), Positives = 45/92 (48%), Gaps = 20/92 (21%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKV---TRDVMGTRFDIETIGNFEDHYCTVWRVSW 161
H + ++ + +D G+ +A+CS D +K+ ++V I + + H ++ + W
Sbjct: 411 HTNEVNAIKWDPSGMLLASCSDDMTLKIWSMKQEV--------CIHDLQAHNKEIYTIKW 462
Query: 162 NITGT---------IVASSGDDGCVRLWKLKK 184
+ TG ++AS+ D VRLW +++
Sbjct: 463 SPTGPATSNPNSNIMLASASFDSTVRLWDIER 494
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.319 0.132 0.416
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 77,916,661
Number of Sequences: 539616
Number of extensions: 3065106
Number of successful extensions: 15760
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 250
Number of HSP's successfully gapped in prelim test: 270
Number of HSP's that attempted gapping in prelim test: 14048
Number of HSP's gapped (non-prelim): 1672
length of query: 197
length of database: 191,569,459
effective HSP length: 111
effective length of query: 86
effective length of database: 131,672,083
effective search space: 11323799138
effective search space used: 11323799138
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 58 (26.9 bits)