Query psy13207
Match_columns 197
No_of_seqs 243 out of 1083
Neff 11.2
Searched_HMMs 29240
Date Fri Aug 16 22:53:36 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13207.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13207hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3frx_A Guanine nucleotide-bind 100.0 1.3E-29 4.3E-34 186.8 20.5 173 6-191 36-234 (319)
2 2ynn_A Coatomer subunit beta'; 100.0 1.6E-29 5.6E-34 185.0 20.2 175 6-192 73-267 (304)
3 3ow8_A WD repeat-containing pr 100.0 1.6E-29 5.3E-34 186.5 18.9 176 6-194 98-289 (321)
4 3ow8_A WD repeat-containing pr 100.0 3.5E-29 1.2E-33 184.7 19.9 174 6-192 54-245 (321)
5 2ynn_A Coatomer subunit beta'; 100.0 3.4E-29 1.2E-33 183.3 19.6 160 16-187 4-175 (304)
6 4gqb_B Methylosome protein 50; 100.0 4.8E-29 1.6E-33 185.6 19.2 171 6-188 99-293 (344)
7 3fm0_A Protein CIAO1; WDR39,SG 100.0 3.9E-28 1.3E-32 180.7 21.9 170 6-185 34-226 (345)
8 1vyh_C Platelet-activating fac 100.0 2.1E-28 7.1E-33 186.1 20.6 176 6-194 168-379 (410)
9 4g56_B MGC81050 protein; prote 100.0 2.2E-28 7.6E-33 182.8 20.1 173 6-191 157-350 (357)
10 1vyh_C Platelet-activating fac 100.0 2.2E-28 7.4E-33 186.0 19.7 175 6-193 126-336 (410)
11 2xzm_R RACK1; ribosome, transl 100.0 5.5E-28 1.9E-32 179.6 21.4 166 6-184 45-244 (343)
12 4aow_A Guanine nucleotide-bind 100.0 7.4E-28 2.5E-32 177.7 21.6 168 16-191 29-253 (340)
13 4gqb_B Methylosome protein 50; 100.0 7E-28 2.4E-32 179.3 21.0 169 6-186 145-333 (344)
14 2pm7_B Protein transport prote 100.0 8.4E-28 2.9E-32 175.4 20.7 174 6-185 27-239 (297)
15 2hes_X YDR267CP; beta-propelle 100.0 2E-27 6.7E-32 175.9 22.3 174 6-185 30-231 (330)
16 1got_B GT-beta; complex (GTP-b 100.0 1.1E-27 3.8E-32 177.8 20.8 163 16-193 46-224 (340)
17 4ery_A WD repeat-containing pr 100.0 2.6E-27 9E-32 173.5 21.8 165 13-190 11-186 (312)
18 4h5i_A Guanine nucleotide-exch 100.0 5.4E-28 1.9E-32 181.2 18.1 166 6-184 153-343 (365)
19 1got_B GT-beta; complex (GTP-b 100.0 4.1E-27 1.4E-31 174.8 21.9 174 6-189 73-262 (340)
20 2pm7_B Protein transport prote 100.0 3.2E-27 1.1E-31 172.3 20.7 184 6-194 73-295 (297)
21 3f3f_A Nucleoporin SEH1; struc 100.0 4.3E-27 1.5E-31 173.4 21.1 186 6-194 29-347 (351)
22 2hes_X YDR267CP; beta-propelle 100.0 5.8E-27 2E-31 173.3 21.5 174 6-185 76-281 (330)
23 3fm0_A Protein CIAO1; WDR39,SG 100.0 5.8E-27 2E-31 174.3 21.2 164 16-186 6-183 (345)
24 2pbi_B Guanine nucleotide-bind 100.0 5.1E-27 1.7E-31 175.2 20.6 165 16-193 55-238 (354)
25 3dm0_A Maltose-binding peripla 100.0 1.5E-27 5.2E-32 192.0 19.0 174 6-191 401-599 (694)
26 2pbi_B Guanine nucleotide-bind 100.0 5.8E-27 2E-31 175.0 20.5 175 6-188 82-275 (354)
27 1nr0_A Actin interacting prote 100.0 2.5E-27 8.7E-32 188.3 19.6 171 9-191 38-228 (611)
28 4e54_B DNA damage-binding prot 100.0 3.7E-28 1.3E-32 185.9 14.3 176 6-188 138-331 (435)
29 4g56_B MGC81050 protein; prote 100.0 3.3E-27 1.1E-31 176.4 17.6 172 7-190 112-307 (357)
30 1erj_A Transcriptional repress 100.0 1.7E-26 5.8E-31 174.6 21.1 180 6-194 141-351 (393)
31 3frx_A Guanine nucleotide-bind 100.0 2.2E-26 7.7E-31 169.4 20.9 168 14-190 6-191 (319)
32 4ery_A WD repeat-containing pr 100.0 3.3E-26 1.1E-30 167.7 21.6 173 6-191 41-230 (312)
33 3iz6_a 40S ribosomal protein R 100.0 7E-27 2.4E-31 176.0 18.1 166 17-190 58-286 (380)
34 3bg1_A Protein SEC13 homolog; 100.0 7.1E-27 2.4E-31 171.9 17.4 183 6-193 77-302 (316)
35 3dwl_C Actin-related protein 2 100.0 5E-27 1.7E-31 176.0 16.8 175 6-187 29-239 (377)
36 3bg1_A Protein SEC13 homolog; 100.0 7.2E-27 2.5E-31 171.8 16.5 172 6-184 31-247 (316)
37 2ymu_A WD-40 repeat protein; u 99.9 3.1E-26 1.1E-30 180.3 20.5 160 7-181 404-577 (577)
38 2w18_A PALB2, fancn, partner a 99.9 2.2E-26 7.4E-31 168.4 17.7 167 8-183 155-356 (356)
39 3iz6_a 40S ribosomal protein R 99.9 4.2E-26 1.4E-30 171.7 19.7 170 6-187 176-378 (380)
40 4ggc_A P55CDC, cell division c 99.9 5.4E-26 1.9E-30 166.3 19.7 170 8-185 43-316 (318)
41 1nr0_A Actin interacting prote 99.9 8.6E-26 3E-30 179.5 19.9 170 6-190 77-276 (611)
42 3jrp_A Fusion protein of prote 99.9 8.1E-25 2.8E-29 163.4 22.1 175 6-186 29-242 (379)
43 1k8k_C P40, ARP2/3 complex 41 99.9 5.2E-25 1.8E-29 164.3 20.7 181 7-192 27-241 (372)
44 2ymu_A WD-40 repeat protein; u 99.9 4.2E-25 1.4E-29 173.9 20.0 171 6-192 362-546 (577)
45 2aq5_A Coronin-1A; WD40 repeat 99.9 6.3E-25 2.2E-29 166.2 20.1 172 6-187 53-257 (402)
46 1erj_A Transcriptional repress 99.9 4.3E-25 1.5E-29 166.9 18.9 172 6-185 183-390 (393)
47 3jrp_A Fusion protein of prote 99.9 1.1E-24 3.6E-29 162.8 20.6 181 6-190 75-293 (379)
48 2xzm_R RACK1; ribosome, transl 99.9 1.8E-24 6.1E-29 160.7 21.5 164 14-183 10-202 (343)
49 2j04_B YDR362CP, TAU91; beta p 99.9 8.3E-26 2.8E-30 176.3 14.8 165 6-184 231-428 (524)
50 3ei3_B DNA damage-binding prot 99.9 7.7E-25 2.6E-29 164.5 19.6 178 6-191 92-289 (383)
51 4h5i_A Guanine nucleotide-exch 99.9 1.3E-24 4.3E-29 163.0 19.6 176 7-191 101-307 (365)
52 3f3f_A Nucleoporin SEH1; struc 99.9 2.8E-24 9.4E-29 158.4 20.8 163 19-186 5-251 (351)
53 3dw8_B Serine/threonine-protei 99.9 1.6E-24 5.4E-29 165.5 20.1 171 9-187 6-261 (447)
54 4e54_B DNA damage-binding prot 99.9 3.3E-25 1.1E-29 169.5 16.1 166 13-188 107-286 (435)
55 2j04_B YDR362CP, TAU91; beta p 99.9 2.5E-25 8.5E-30 173.7 15.4 180 6-192 179-394 (524)
56 3vl1_A 26S proteasome regulato 99.9 1.9E-24 6.4E-29 164.0 19.9 170 6-187 115-325 (420)
57 3v7d_B Cell division control p 99.9 2.8E-24 9.6E-29 165.2 20.7 173 6-194 138-351 (464)
58 3gre_A Serine/threonine-protei 99.9 2.1E-24 7.3E-29 164.7 19.9 166 19-191 56-252 (437)
59 4aow_A Guanine nucleotide-bind 99.9 3.2E-24 1.1E-28 158.2 20.2 172 6-186 146-339 (340)
60 1sq9_A Antiviral protein SKI8; 99.9 5E-24 1.7E-28 160.5 21.1 168 7-185 145-396 (397)
61 3dm0_A Maltose-binding peripla 99.9 2.2E-24 7.6E-29 173.6 20.4 174 15-193 372-559 (694)
62 3k26_A Polycomb protein EED; W 99.9 4.1E-24 1.4E-28 158.9 20.3 167 20-192 13-200 (366)
63 3dw8_B Serine/threonine-protei 99.9 1.7E-24 6E-29 165.3 18.4 182 6-192 46-324 (447)
64 3zwl_B Eukaryotic translation 99.9 6.4E-24 2.2E-28 157.9 20.4 173 6-191 50-256 (369)
65 4gga_A P55CDC, cell division c 99.9 5.6E-24 1.9E-28 162.0 20.5 177 6-192 205-403 (420)
66 1gxr_A ESG1, transducin-like e 99.9 9.2E-24 3.1E-28 155.4 20.9 160 21-189 47-219 (337)
67 3lrv_A PRE-mRNA-splicing facto 99.9 2.7E-24 9.2E-29 159.7 18.2 171 6-186 91-294 (343)
68 1r5m_A SIR4-interacting protei 99.9 4E-24 1.4E-28 161.8 19.3 171 7-186 127-363 (425)
69 3k26_A Polycomb protein EED; W 99.9 4.1E-25 1.4E-29 164.3 13.5 177 6-188 91-322 (366)
70 3ei3_B DNA damage-binding prot 99.9 1.2E-23 4E-28 158.1 20.9 161 14-185 62-237 (383)
71 4aez_A CDC20, WD repeat-contai 99.9 8.4E-24 2.9E-28 160.1 19.8 174 6-191 192-387 (401)
72 1sq9_A Antiviral protein SKI8; 99.9 8.5E-24 2.9E-28 159.2 18.9 177 6-192 87-330 (397)
73 3sfz_A APAF-1, apoptotic pepti 99.9 9.7E-24 3.3E-28 179.0 20.8 156 20-188 610-778 (1249)
74 1gxr_A ESG1, transducin-like e 99.9 3.1E-23 1.1E-27 152.6 20.8 162 7-183 160-336 (337)
75 3gre_A Serine/threonine-protei 99.9 1.8E-24 6.1E-29 165.2 14.3 179 6-192 82-300 (437)
76 3i2n_A WD repeat-containing pr 99.9 3.1E-23 1E-27 153.8 20.6 173 6-187 135-356 (357)
77 3odt_A Protein DOA1; ubiquitin 99.9 3.4E-23 1.1E-27 151.0 19.9 168 6-190 120-302 (313)
78 3jro_A Fusion protein of prote 99.9 2.9E-23 1E-27 168.6 21.6 175 6-186 27-240 (753)
79 2xyi_A Probable histone-bindin 99.9 2.3E-23 8E-28 159.1 19.8 173 7-186 148-355 (430)
80 3vl1_A 26S proteasome regulato 99.9 3.6E-24 1.2E-28 162.5 15.0 174 6-186 157-367 (420)
81 3mmy_A MRNA export factor; mRN 99.9 1.9E-23 6.5E-28 155.3 18.5 178 6-193 60-313 (368)
82 2xyi_A Probable histone-bindin 99.9 3.8E-23 1.3E-27 158.0 20.6 174 6-184 200-410 (430)
83 3mkq_A Coatomer beta'-subunit; 99.9 8.8E-24 3E-28 172.3 18.0 162 16-189 4-177 (814)
84 2pm9_A Protein WEB1, protein t 99.9 5.1E-24 1.7E-28 161.2 15.5 182 6-193 85-303 (416)
85 1r5m_A SIR4-interacting protei 99.9 2.2E-23 7.5E-28 157.7 18.9 168 7-183 224-424 (425)
86 2pm9_A Protein WEB1, protein t 99.9 7E-24 2.4E-28 160.5 15.7 177 6-188 132-341 (416)
87 2oaj_A Protein SNI1; WD40 repe 99.9 3.7E-24 1.2E-28 176.6 15.2 164 21-188 431-668 (902)
88 2vdu_B TRNA (guanine-N(7)-)-me 99.9 1.8E-23 6E-28 160.6 17.9 158 22-191 99-278 (450)
89 4a11_B DNA excision repair pro 99.9 1.2E-22 4E-27 153.1 21.2 169 9-186 22-220 (408)
90 3jro_A Fusion protein of prote 99.9 2E-23 6.7E-28 169.6 18.0 181 6-190 73-291 (753)
91 1k8k_C P40, ARP2/3 complex 41 99.9 8E-23 2.7E-27 152.5 19.9 169 6-184 70-274 (372)
92 3i2n_A WD repeat-containing pr 99.9 3.6E-23 1.2E-27 153.4 17.9 177 6-186 86-293 (357)
93 4gq1_A NUP37; propeller, trans 99.9 3.1E-24 1E-28 162.3 12.2 172 6-190 107-354 (393)
94 1pgu_A Actin interacting prote 99.9 5.5E-23 1.9E-27 162.5 19.5 175 9-191 38-245 (615)
95 3dwl_C Actin-related protein 2 99.9 1.1E-23 3.8E-28 157.7 14.4 151 22-184 8-177 (377)
96 2oaj_A Protein SNI1; WD40 repe 99.9 2.2E-23 7.6E-28 172.0 17.3 167 6-188 35-246 (902)
97 2aq5_A Coronin-1A; WD40 repeat 99.9 1.9E-22 6.6E-27 152.6 20.7 172 6-187 100-302 (402)
98 3lrv_A PRE-mRNA-splicing facto 99.9 3.6E-23 1.2E-27 153.6 15.2 173 6-191 54-251 (343)
99 4aez_A CDC20, WD repeat-contai 99.9 1.3E-22 4.5E-27 153.6 18.1 170 7-191 110-300 (401)
100 3odt_A Protein DOA1; ubiquitin 99.9 4E-22 1.4E-26 145.3 19.9 152 14-183 7-173 (313)
101 3mkq_A Coatomer beta'-subunit; 99.9 1.6E-22 5.6E-27 164.8 19.5 173 7-191 74-266 (814)
102 4a11_B DNA excision repair pro 99.9 4.6E-22 1.6E-26 149.8 20.2 175 6-188 62-280 (408)
103 1yfq_A Cell cycle arrest prote 99.9 9.8E-23 3.3E-27 150.5 15.8 177 6-193 75-291 (342)
104 3zwl_B Eukaryotic translation 99.9 7.3E-22 2.5E-26 146.8 20.3 165 9-187 141-349 (369)
105 2j04_A TAU60, YPL007P, hypothe 99.9 1.4E-22 4.8E-27 156.9 16.8 168 8-187 65-257 (588)
106 1p22_A F-BOX/WD-repeat protein 99.9 5E-22 1.7E-26 151.9 19.6 167 6-193 149-334 (435)
107 3v7d_B Cell division control p 99.9 1.5E-21 5.3E-26 150.0 21.7 173 6-188 179-385 (464)
108 1p22_A F-BOX/WD-repeat protein 99.9 4.5E-22 1.5E-26 152.1 17.5 162 6-186 189-367 (435)
109 4gga_A P55CDC, cell division c 99.9 4.5E-22 1.6E-26 151.5 16.8 173 8-191 123-317 (420)
110 2ovr_B FBW7, F-BOX/WD repeat p 99.9 1.4E-21 4.7E-26 149.7 19.2 166 6-192 135-316 (445)
111 3sfz_A APAF-1, apoptotic pepti 99.9 1.8E-22 6.1E-27 171.3 15.0 169 6-190 979-1164(1249)
112 2vdu_B TRNA (guanine-N(7)-)-me 99.9 6.3E-21 2.2E-25 146.4 21.2 166 6-182 121-337 (450)
113 2j04_A TAU60, YPL007P, hypothe 99.9 1.1E-21 3.8E-26 152.0 16.7 165 6-183 103-296 (588)
114 4gq1_A NUP37; propeller, trans 99.9 1.4E-21 4.7E-26 147.8 16.7 169 6-183 162-388 (393)
115 3mmy_A MRNA export factor; mRN 99.9 1.3E-21 4.5E-26 145.4 14.7 170 6-183 104-345 (368)
116 1yfq_A Cell cycle arrest prote 99.9 3.8E-21 1.3E-25 142.0 16.9 168 6-185 29-226 (342)
117 1pgu_A Actin interacting prote 99.9 7.2E-21 2.5E-25 150.4 19.5 170 6-191 84-290 (615)
118 2ovr_B FBW7, F-BOX/WD repeat p 99.9 9.3E-21 3.2E-25 145.1 19.2 162 6-185 255-443 (445)
119 3vu4_A KMHSV2; beta-propeller 99.9 2E-20 6.7E-25 139.6 20.1 157 7-185 78-272 (355)
120 4ggc_A P55CDC, cell division c 99.9 8E-20 2.8E-24 133.4 19.4 146 27-186 27-183 (318)
121 3vu4_A KMHSV2; beta-propeller 99.9 1.2E-20 4.1E-25 140.8 14.7 143 6-186 155-338 (355)
122 2oit_A Nucleoporin 214KDA; NH2 99.8 3.3E-20 1.1E-24 142.0 11.3 127 24-183 91-222 (434)
123 1l0q_A Surface layer protein; 99.8 6.7E-18 2.3E-22 126.9 19.9 167 6-189 8-194 (391)
124 1l0q_A Surface layer protein; 99.8 2.9E-17 9.9E-22 123.4 18.1 167 8-191 94-282 (391)
125 3bws_A Protein LP49; two-domai 99.8 5E-17 1.7E-21 123.7 19.5 169 7-190 188-396 (433)
126 2hqs_A Protein TOLB; TOLB, PAL 99.8 7.4E-17 2.5E-21 122.7 19.1 163 10-187 159-347 (415)
127 2w18_A PALB2, fancn, partner a 99.8 3.2E-17 1.1E-21 120.2 15.3 129 39-188 127-273 (356)
128 3bws_A Protein LP49; two-domai 99.8 7.8E-17 2.7E-21 122.6 18.0 154 26-188 123-296 (433)
129 2ojh_A Uncharacterized protein 99.7 1.6E-16 5.3E-21 114.4 16.1 166 5-183 17-203 (297)
130 2oit_A Nucleoporin 214KDA; NH2 99.7 1.8E-16 6.1E-21 121.3 15.5 134 6-185 114-279 (434)
131 2hqs_A Protein TOLB; TOLB, PAL 99.7 9.6E-16 3.3E-20 116.6 17.1 160 10-185 203-388 (415)
132 1nir_A Nitrite reductase; hemo 99.6 2.3E-14 7.8E-19 112.6 17.9 170 7-191 156-362 (543)
133 2ojh_A Uncharacterized protein 99.6 5E-14 1.7E-18 101.2 16.8 167 9-187 61-261 (297)
134 1xfd_A DIP, dipeptidyl aminope 99.6 3.3E-14 1.1E-18 114.8 15.9 172 7-188 34-293 (723)
135 1ri6_A Putative isomerase YBHE 99.6 3.9E-13 1.3E-17 98.8 19.9 170 7-184 12-209 (343)
136 1ri6_A Putative isomerase YBHE 99.6 4.2E-13 1.4E-17 98.6 18.1 170 9-183 105-307 (343)
137 3hfq_A Uncharacterized protein 99.5 3.8E-12 1.3E-16 94.1 20.2 151 27-183 142-316 (347)
138 2ecf_A Dipeptidyl peptidase IV 99.5 3.6E-13 1.2E-17 109.1 15.6 142 25-175 36-230 (741)
139 1pby_B Quinohemoprotein amine 99.5 7.8E-13 2.7E-17 96.9 15.9 150 27-192 83-318 (337)
140 3vgz_A Uncharacterized protein 99.5 7.3E-13 2.5E-17 97.9 15.7 172 9-189 68-267 (353)
141 1z68_A Fibroblast activation p 99.5 1.1E-13 3.7E-18 111.9 11.3 174 8-189 34-296 (719)
142 3hfq_A Uncharacterized protein 99.5 8E-12 2.7E-16 92.4 20.2 172 9-184 62-271 (347)
143 3u4y_A Uncharacterized protein 99.5 2.2E-12 7.6E-17 94.6 17.1 167 9-187 61-255 (331)
144 3u4y_A Uncharacterized protein 99.5 1.4E-11 4.8E-16 90.3 20.7 169 7-187 17-210 (331)
145 3scy_A Hypothetical bacterial 99.5 1.1E-11 3.7E-16 92.2 20.1 153 27-183 156-336 (361)
146 3vgz_A Uncharacterized protein 99.5 1.5E-12 5.1E-17 96.2 15.1 149 25-189 40-220 (353)
147 2z3z_A Dipeptidyl aminopeptida 99.5 4E-13 1.4E-17 108.3 12.6 175 9-189 100-348 (706)
148 1k32_A Tricorn protease; prote 99.5 6.1E-13 2.1E-17 111.7 13.6 147 24-186 294-463 (1045)
149 1jmx_B Amine dehydrogenase; ox 99.5 1.5E-12 5.1E-17 95.9 14.1 151 27-191 93-332 (349)
150 1xfd_A DIP, dipeptidyl aminope 99.5 1.1E-13 3.7E-18 111.8 7.8 139 26-175 17-194 (723)
151 1nir_A Nitrite reductase; hemo 99.4 8.4E-12 2.9E-16 98.0 17.5 166 8-184 198-402 (543)
152 3scy_A Hypothetical bacterial 99.4 1E-10 3.5E-15 86.9 21.8 171 9-183 74-290 (361)
153 2ecf_A Dipeptidyl peptidase IV 99.4 4.5E-12 1.6E-16 102.6 15.1 150 27-188 110-325 (741)
154 3o4h_A Acylamino-acid-releasin 99.4 3.3E-12 1.1E-16 101.0 12.6 139 28-182 112-274 (582)
155 2z3z_A Dipeptidyl aminopeptida 99.4 5.6E-11 1.9E-15 95.8 18.9 169 8-186 233-437 (706)
156 1xip_A Nucleoporin NUP159; bet 99.4 1.5E-11 5.1E-16 92.2 13.7 140 27-186 39-193 (388)
157 1k32_A Tricorn protease; prote 99.4 2.9E-11 9.9E-16 101.7 16.2 148 21-184 332-502 (1045)
158 1pby_B Quinohemoprotein amine 99.4 2.7E-11 9.4E-16 88.7 13.9 135 40-188 2-167 (337)
159 4a5s_A Dipeptidyl peptidase 4 99.3 2.9E-11 9.8E-16 98.3 14.6 138 25-174 16-191 (740)
160 3o4h_A Acylamino-acid-releasin 99.3 6.4E-11 2.2E-15 93.6 16.2 161 8-188 42-231 (582)
161 1jmx_B Amine dehydrogenase; ox 99.3 1.7E-11 5.9E-16 90.3 11.8 149 30-190 4-181 (349)
162 1z68_A Fibroblast activation p 99.3 3.1E-11 1.1E-15 97.6 12.3 134 29-174 19-189 (719)
163 1q7f_A NHL, brain tumor CG1071 99.3 1.5E-09 5.2E-14 78.0 18.5 150 24-186 119-282 (286)
164 1jof_A Carboxy-CIS,CIS-muconat 99.2 7.7E-10 2.6E-14 82.5 16.2 149 25-183 39-223 (365)
165 3fvz_A Peptidyl-glycine alpha- 99.2 1.8E-09 6.2E-14 79.5 17.7 155 24-190 22-233 (329)
166 1jof_A Carboxy-CIS,CIS-muconat 99.2 9.7E-10 3.3E-14 82.0 16.2 168 8-185 117-342 (365)
167 4a5s_A Dipeptidyl peptidase 4 99.2 4.9E-10 1.7E-14 91.1 13.8 167 9-186 35-296 (740)
168 3pe7_A Oligogalacturonate lyas 99.2 2.9E-09 9.9E-14 79.6 16.9 152 21-186 76-275 (388)
169 3fvz_A Peptidyl-glycine alpha- 99.2 7E-09 2.4E-13 76.3 17.9 154 23-185 140-323 (329)
170 2oiz_A Aromatic amine dehydrog 99.2 2.8E-09 9.6E-14 79.6 15.8 56 128-191 286-343 (361)
171 3azo_A Aminopeptidase; POP fam 99.1 1.8E-09 6.1E-14 86.5 15.3 147 24-183 128-322 (662)
172 3e5z_A Putative gluconolactona 99.1 8.6E-09 2.9E-13 74.5 17.6 167 9-183 49-245 (296)
173 1q7f_A NHL, brain tumor CG1071 99.1 1.1E-08 3.7E-13 73.6 17.8 154 22-184 26-194 (286)
174 2dg1_A DRP35, lactonase; beta 99.1 5.8E-08 2E-12 71.2 19.6 165 7-184 24-213 (333)
175 2xdw_A Prolyl endopeptidase; a 99.0 1.9E-08 6.7E-13 81.3 15.8 153 23-186 122-322 (710)
176 3pe7_A Oligogalacturonate lyas 99.0 2.6E-08 9E-13 74.4 15.2 152 20-185 25-226 (388)
177 1rwi_B Serine/threonine-protei 99.0 6.8E-08 2.3E-12 68.6 16.3 150 26-187 108-267 (270)
178 3azo_A Aminopeptidase; POP fam 98.9 1.2E-08 4.3E-13 81.6 11.6 156 21-184 19-226 (662)
179 2bkl_A Prolyl endopeptidase; m 98.9 2E-08 7E-13 81.1 12.5 122 23-184 118-261 (695)
180 3e5z_A Putative gluconolactona 98.9 1.5E-07 5.1E-12 67.9 15.4 147 21-183 23-201 (296)
181 3c5m_A Oligogalacturonate lyas 98.9 4E-08 1.4E-12 73.4 12.5 149 29-186 84-275 (396)
182 3no2_A Uncharacterized protein 98.9 6.8E-08 2.3E-12 69.4 13.1 138 39-187 5-157 (276)
183 1qks_A Cytochrome CD1 nitrite 98.9 5E-07 1.7E-11 71.3 18.8 151 27-189 198-378 (567)
184 1xip_A Nucleoporin NUP159; bet 98.8 1.2E-07 4.1E-12 71.2 13.8 128 23-171 86-231 (388)
185 3g4e_A Regucalcin; six bladed 98.8 8.7E-07 3E-11 64.1 17.8 161 24-190 52-235 (297)
186 3no2_A Uncharacterized protein 98.8 2.4E-07 8.2E-12 66.6 14.2 165 7-189 12-200 (276)
187 2dg1_A DRP35, lactonase; beta 98.8 2E-06 7E-11 62.9 19.5 154 23-183 84-262 (333)
188 2bkl_A Prolyl endopeptidase; m 98.8 5.7E-07 1.9E-11 72.7 16.9 166 8-183 145-348 (695)
189 1rwi_B Serine/threonine-protei 98.8 9.7E-07 3.3E-11 62.5 16.1 147 26-185 67-223 (270)
190 3c5m_A Oligogalacturonate lyas 98.8 2.4E-07 8.1E-12 69.2 13.4 159 10-183 168-381 (396)
191 1pjx_A Dfpase, DIISOPROPYLFLUO 98.7 1.9E-06 6.5E-11 62.4 16.3 147 26-186 117-301 (314)
192 1yr2_A Prolyl oligopeptidase; 98.7 5.2E-07 1.8E-11 73.4 14.3 149 24-185 161-351 (741)
193 1pjx_A Dfpase, DIISOPROPYLFLUO 98.7 5.5E-06 1.9E-10 59.9 17.8 159 24-187 69-259 (314)
194 2gop_A Trilobed protease; beta 98.7 1.2E-06 4.3E-11 64.3 14.5 131 28-184 106-291 (347)
195 2gop_A Trilobed protease; beta 98.7 7.9E-07 2.7E-11 65.4 13.3 134 26-183 15-206 (347)
196 2z2n_A Virginiamycin B lyase; 98.6 1.7E-05 5.7E-10 56.8 19.3 150 21-182 10-169 (299)
197 2xdw_A Prolyl endopeptidase; a 98.6 1.2E-05 4E-10 65.2 18.9 149 24-186 231-416 (710)
198 3dsm_A Uncharacterized protein 98.6 8.9E-06 3.1E-10 59.7 16.7 151 25-187 83-256 (328)
199 2ghs_A AGR_C_1268P; regucalcin 98.5 3.2E-05 1.1E-09 56.7 17.9 153 25-183 89-259 (326)
200 2z2n_A Virginiamycin B lyase; 98.4 6.2E-05 2.1E-09 53.8 18.0 148 24-183 97-254 (299)
201 3dsm_A Uncharacterized protein 98.4 7.5E-06 2.6E-10 60.1 13.3 146 27-188 45-216 (328)
202 2ghs_A AGR_C_1268P; regucalcin 98.4 9.9E-05 3.4E-09 54.0 18.5 141 27-183 50-209 (326)
203 1yr2_A Prolyl oligopeptidase; 98.4 9E-06 3.1E-10 66.2 13.3 108 76-185 164-304 (741)
204 3hrp_A Uncharacterized protein 98.4 4.4E-05 1.5E-09 57.9 16.1 146 26-184 131-298 (409)
205 3g4e_A Regucalcin; six bladed 98.3 5.3E-05 1.8E-09 54.7 15.9 133 26-172 98-260 (297)
206 3iuj_A Prolyl endopeptidase; h 98.3 3E-06 1E-10 68.5 10.1 135 23-186 126-270 (693)
207 1qks_A Cytochrome CD1 nitrite 98.3 1.2E-05 4E-10 63.6 12.8 109 39-191 167-282 (567)
208 2qc5_A Streptogramin B lactona 98.3 0.00032 1.1E-08 50.0 19.5 149 22-182 16-174 (300)
209 3dr2_A Exported gluconolactona 98.3 7.4E-05 2.5E-09 54.1 15.8 149 21-185 40-225 (305)
210 2mad_H Methylamine dehydrogena 98.2 0.0002 7E-09 53.6 17.5 56 129-190 299-356 (373)
211 2qc5_A Streptogramin B lactona 98.2 0.00035 1.2E-08 49.8 17.9 147 25-183 103-259 (300)
212 3hrp_A Uncharacterized protein 98.2 0.00024 8.1E-09 53.8 17.2 148 24-182 217-408 (409)
213 3nol_A Glutamine cyclotransfer 98.2 0.00026 8.8E-09 50.1 16.0 161 13-191 29-208 (262)
214 2oiz_A Aromatic amine dehydrog 98.2 2.4E-05 8.3E-10 58.2 11.5 89 31-166 259-360 (361)
215 3dr2_A Exported gluconolactona 98.1 0.00013 4.5E-09 52.7 14.2 150 22-183 82-266 (305)
216 2iwa_A Glutamine cyclotransfer 98.1 0.00087 3E-08 47.7 18.8 159 15-191 9-188 (266)
217 2qe8_A Uncharacterized protein 98.1 0.00019 6.6E-09 52.9 15.0 121 23-181 64-223 (343)
218 3iuj_A Prolyl endopeptidase; h 98.1 0.00012 4.2E-09 59.2 14.8 164 10-184 155-359 (693)
219 1mda_H Methylamine dehydrogena 98.0 0.00021 7.3E-09 53.3 13.8 58 129-192 295-354 (368)
220 3c75_H MADH, methylamine dehyd 98.0 0.00017 5.9E-09 54.9 13.4 37 155-191 371-409 (426)
221 3nok_A Glutaminyl cyclase; bet 97.9 0.00077 2.6E-08 47.7 14.2 146 27-190 56-216 (268)
222 3mbr_X Glutamine cyclotransfer 97.8 0.0031 1.1E-07 44.1 17.2 157 14-190 8-185 (243)
223 2qe8_A Uncharacterized protein 97.8 0.00074 2.5E-08 49.7 13.5 145 26-177 120-314 (343)
224 2hz6_A Endoplasmic reticulum t 97.8 3.6E-06 1.2E-10 63.0 0.9 130 39-187 9-152 (369)
225 3sjl_D Methylamine dehydrogena 97.8 0.0024 8.1E-08 47.9 16.0 137 31-184 38-208 (386)
226 3sjl_D Methylamine dehydrogena 97.7 0.0013 4.3E-08 49.4 13.5 146 30-185 82-257 (386)
227 2ece_A 462AA long hypothetical 97.7 0.0038 1.3E-07 47.7 15.4 152 28-185 140-353 (462)
228 2mad_H Methylamine dehydrogena 97.6 0.0014 5E-08 48.9 12.4 121 33-190 28-162 (373)
229 2xe4_A Oligopeptidase B; hydro 97.4 0.0068 2.3E-07 49.6 14.7 155 23-189 170-359 (751)
230 2ece_A 462AA long hypothetical 97.3 0.019 6.6E-07 43.9 14.8 138 28-172 190-399 (462)
231 3c75_H MADH, methylamine dehyd 97.3 0.00097 3.3E-08 50.8 7.6 119 39-191 84-216 (426)
232 1fwx_A Nitrous oxide reductase 97.2 0.0017 5.8E-08 51.2 8.8 111 74-184 276-431 (595)
233 3tc9_A Hypothetical hydrolase; 97.2 0.033 1.1E-06 42.5 15.4 144 27-184 138-301 (430)
234 2iwa_A Glutamine cyclotransfer 97.0 0.053 1.8E-06 38.5 13.9 135 39-186 76-239 (266)
235 3hxj_A Pyrrolo-quinoline quino 96.9 0.037 1.3E-06 39.8 12.7 140 25-185 176-325 (330)
236 1mda_H Methylamine dehydrogena 96.8 0.0035 1.2E-07 46.8 6.7 54 126-184 94-158 (368)
237 3nol_A Glutamine cyclotransfer 96.6 0.085 2.9E-06 37.3 12.4 120 39-173 97-244 (262)
238 3qqz_A Putative uncharacterize 96.6 0.11 3.6E-06 36.7 16.2 127 19-183 20-150 (255)
239 2hz6_A Endoplasmic reticulum t 96.5 0.002 6.8E-08 48.0 3.8 63 116-187 9-71 (369)
240 3hxj_A Pyrrolo-quinoline quino 96.5 0.088 3E-06 37.8 12.3 138 26-182 137-282 (330)
241 1kb0_A Quinohemoprotein alcoho 96.5 0.036 1.2E-06 44.8 10.9 58 127-190 456-513 (677)
242 3qqz_A Putative uncharacterize 96.4 0.14 4.8E-06 36.1 16.8 148 27-181 71-250 (255)
243 1yiq_A Quinohemoprotein alcoho 96.4 0.071 2.4E-06 43.2 12.2 56 127-188 454-509 (689)
244 1k3i_A Galactose oxidase precu 96.4 0.24 8.1E-06 39.8 15.2 76 109-191 245-329 (656)
245 2fp8_A Strictosidine synthase; 96.3 0.17 6E-06 36.5 14.3 141 27-185 127-314 (322)
246 1npe_A Nidogen, entactin; glyc 96.1 0.2 6.8E-06 35.1 19.2 147 27-184 37-198 (267)
247 3mbr_X Glutamine cyclotransfer 96.0 0.22 7.6E-06 34.8 12.9 120 39-173 75-223 (243)
248 3q7m_A Lipoprotein YFGL, BAMB; 96.0 0.16 5.4E-06 37.5 11.6 112 39-187 53-165 (376)
249 2fp8_A Strictosidine synthase; 95.9 0.31 1.1E-05 35.1 16.4 146 27-183 81-268 (322)
250 3q7m_A Lipoprotein YFGL, BAMB; 95.7 0.069 2.4E-06 39.4 8.7 126 39-181 239-375 (376)
251 1fwx_A Nitrous oxide reductase 95.7 0.62 2.1E-05 37.0 14.1 150 26-184 134-361 (595)
252 2xe4_A Oligopeptidase B; hydro 95.6 0.77 2.6E-05 37.6 15.6 143 29-181 224-395 (751)
253 4hw6_A Hypothetical protein, I 95.6 0.54 1.9E-05 35.8 15.6 146 26-183 139-303 (433)
254 3nok_A Glutaminyl cyclase; bet 95.6 0.16 5.4E-06 36.1 9.5 124 31-172 101-253 (268)
255 3pbp_A Nucleoporin NUP82; beta 95.5 0.56 1.9E-05 35.7 14.2 135 27-186 67-214 (452)
256 4a2l_A BT_4663, two-component 95.4 0.9 3.1E-05 37.3 19.4 151 26-186 263-438 (795)
257 2p9w_A MAL S 1 allergenic prot 95.4 0.47 1.6E-05 34.8 11.6 31 155-185 186-216 (334)
258 3kya_A Putative phosphatase; s 95.3 0.75 2.6E-05 35.8 13.3 154 27-183 140-340 (496)
259 1npe_A Nidogen, entactin; glyc 95.3 0.45 1.5E-05 33.2 18.2 153 26-191 79-245 (267)
260 1kb0_A Quinohemoprotein alcoho 95.0 0.16 5.6E-06 41.0 9.2 61 116-183 488-566 (677)
261 1yiq_A Quinohemoprotein alcoho 94.3 0.21 7E-06 40.5 8.3 47 116-169 486-533 (689)
262 3v64_C Agrin; beta propeller, 93.3 1.8 6.1E-05 31.8 18.7 146 27-184 74-234 (349)
263 1n7d_A LDL receptor, low-densi 93.1 0.94 3.2E-05 36.8 10.1 149 26-184 406-571 (699)
264 4a2l_A BT_4663, two-component 93.0 3.2 0.00011 34.1 19.0 145 26-185 406-572 (795)
265 2ad6_A Methanol dehydrogenase 93.0 0.66 2.3E-05 36.7 8.9 57 126-188 442-498 (571)
266 3sre_A PON1, serum paraoxonase 92.8 2.2 7.5E-05 31.6 16.1 31 155-185 222-253 (355)
267 3v65_B Low-density lipoprotein 92.8 2.3 7.7E-05 31.7 17.4 148 26-184 116-277 (386)
268 3v9f_A Two-component system se 92.6 3.6 0.00012 33.7 16.8 145 26-185 407-569 (781)
269 1kv9_A Type II quinohemoprotei 92.1 2.2 7.5E-05 34.4 11.0 59 125-189 435-493 (668)
270 1tl2_A L10, protein (tachylect 91.9 2.2 7.5E-05 29.5 10.2 68 109-180 90-159 (236)
271 4hw6_A Hypothetical protein, I 91.7 3.4 0.00012 31.4 14.3 143 28-183 230-432 (433)
272 1flg_A Protein (quinoprotein e 91.4 1.1 3.7E-05 35.6 8.4 57 126-188 464-520 (582)
273 2xbg_A YCF48-like protein; pho 91.3 3.1 0.00011 30.1 17.1 155 24-192 120-286 (327)
274 3tc9_A Hypothetical hydrolase; 91.2 3.9 0.00013 31.0 14.4 57 27-89 227-284 (430)
275 1n7d_A LDL receptor, low-densi 91.2 1.6 5.4E-05 35.5 9.3 152 28-189 455-619 (699)
276 3sov_A LRP-6, low-density lipo 90.9 3.4 0.00012 29.9 18.0 148 27-184 36-197 (318)
277 1w6s_A Methanol dehydrogenase 90.7 2.2 7.4E-05 34.1 9.4 57 126-188 451-507 (599)
278 1cru_A Protein (soluble quinop 89.9 5.3 0.00018 30.6 16.8 58 26-85 27-87 (454)
279 2ism_A Putative oxidoreductase 89.8 4.6 0.00016 29.6 12.2 27 26-55 31-57 (352)
280 3kya_A Putative phosphatase; s 89.2 6.6 0.00023 30.5 15.2 41 155-195 445-486 (496)
281 1flg_A Protein (quinoprotein e 88.3 5 0.00017 31.8 9.9 50 115-171 496-547 (582)
282 1ijq_A LDL receptor, low-densi 88.1 5.8 0.0002 28.5 19.7 148 25-184 29-195 (316)
283 3v65_B Low-density lipoprotein 87.8 6.9 0.00024 29.1 18.0 149 27-187 160-321 (386)
284 4gq2_M Nucleoporin NUP120; bet 87.6 1.6 5.5E-05 36.9 6.9 38 27-66 237-274 (950)
285 2p4o_A Hypothetical protein; p 87.5 6 0.00021 28.1 10.0 73 107-186 32-106 (306)
286 3das_A Putative oxidoreductase 87.5 7 0.00024 28.8 13.4 33 25-59 31-63 (347)
287 4gq2_M Nucleoporin NUP120; bet 86.9 5 0.00017 34.0 9.5 36 155-190 237-272 (950)
288 2p4o_A Hypothetical protein; p 86.8 6.6 0.00023 27.9 20.8 154 15-184 22-198 (306)
289 1k3i_A Galactose oxidase precu 86.8 11 0.00037 30.3 16.1 57 28-90 245-302 (656)
290 3m0c_C LDL receptor, low-densi 86.8 12 0.00042 30.9 19.6 153 25-185 423-590 (791)
291 2ad6_A Methanol dehydrogenase 85.8 5.4 0.00019 31.5 8.8 48 116-170 475-523 (571)
292 3v9f_A Two-component system se 84.7 15 0.00052 30.0 17.8 147 26-184 363-524 (781)
293 2xn4_A Kelch-like protein 2; s 83.6 9.4 0.00032 26.9 16.4 65 122-192 209-283 (302)
294 2vpj_A Kelch-like protein 12; 83.5 9.5 0.00033 26.8 15.4 65 122-192 211-285 (301)
295 4asc_A Kelch repeat and BTB do 83.2 10 0.00035 27.0 14.1 57 129-191 213-283 (315)
296 3pbp_A Nucleoporin NUP82; beta 83.1 14 0.00047 28.3 15.1 32 153-184 124-158 (452)
297 4fhn_B Nucleoporin NUP120; pro 82.7 0.94 3.2E-05 39.0 3.5 39 27-67 239-277 (1139)
298 3p5b_L Low density lipoprotein 82.7 13 0.00044 27.8 19.7 152 25-184 111-277 (400)
299 3amr_A 3-phytase; beta-propell 82.5 13 0.00044 27.6 11.0 58 122-183 91-161 (355)
300 3ii7_A Kelch-like protein 7; p 82.5 11 0.00037 26.7 15.5 58 128-191 216-278 (306)
301 2xbg_A YCF48-like protein; pho 82.2 12 0.0004 27.0 16.4 147 23-182 160-320 (327)
302 1kv9_A Type II quinohemoprotei 82.1 4.8 0.00017 32.5 7.2 65 115-187 116-190 (668)
303 3amr_A 3-phytase; beta-propell 80.0 16 0.00055 27.1 14.6 123 26-183 128-262 (355)
304 3a9g_A Putative uncharacterize 79.2 16 0.00056 26.7 10.2 27 26-55 29-55 (354)
305 3p5b_L Low density lipoprotein 78.8 18 0.00062 27.0 20.3 153 26-188 159-324 (400)
306 1ijq_A LDL receptor, low-densi 78.3 16 0.00055 26.1 18.7 152 27-188 78-242 (316)
307 3v64_C Agrin; beta propeller, 77.6 18 0.00062 26.4 19.2 149 27-187 117-278 (349)
308 3ei3_A DNA damage-binding prot 77.1 37 0.0013 29.6 12.0 75 106-187 513-594 (1158)
309 2xn4_A Kelch-like protein 2; s 76.1 18 0.0006 25.4 15.3 59 128-192 173-236 (302)
310 1zgk_A Kelch-like ECH-associat 75.9 18 0.00062 25.5 14.8 65 122-192 220-294 (308)
311 3f7f_A Nucleoporin NUP120; nuc 75.0 5.5 0.00019 32.5 5.4 38 26-67 222-259 (729)
312 2g8s_A Glucose/sorbosone dehyd 73.9 23 0.0008 25.8 13.1 28 27-57 19-47 (353)
313 1zgk_A Kelch-like ECH-associat 73.1 22 0.00075 25.1 14.8 59 128-192 184-247 (308)
314 2woz_A Kelch repeat and BTB do 71.1 25 0.00085 24.9 13.6 57 129-191 223-293 (318)
315 4fhn_B Nucleoporin NUP120; pro 70.1 1.8 6.1E-05 37.4 1.7 36 155-190 239-274 (1139)
316 3sov_A LRP-6, low-density lipo 70.1 28 0.00095 25.1 18.1 149 28-188 81-242 (318)
317 2wg3_C Hedgehog-interacting pr 69.5 36 0.0012 26.1 14.8 30 26-57 14-44 (463)
318 3sre_A PON1, serum paraoxonase 69.5 31 0.0011 25.4 16.1 142 27-174 113-287 (355)
319 1tl2_A L10, protein (tachylect 68.6 10 0.00035 26.2 4.9 71 108-184 42-116 (236)
320 1w6s_A Methanol dehydrogenase 68.0 32 0.0011 27.5 8.3 59 122-187 125-194 (599)
321 3m0c_C LDL receptor, low-densi 67.1 54 0.0018 27.2 19.9 152 26-187 471-635 (791)
322 2be1_A Serine/threonine-protei 66.9 15 0.00052 26.9 5.9 24 39-62 10-33 (339)
323 3s94_A LRP-6, low-density lipo 65.0 52 0.0018 26.3 16.9 150 25-185 39-203 (619)
324 3f7f_A Nucleoporin NUP120; nuc 64.3 8.1 0.00028 31.6 4.3 35 155-191 223-257 (729)
325 1cru_A Protein (soluble quinop 63.9 42 0.0014 25.6 8.1 38 154-191 405-449 (454)
326 3ii7_A Kelch-like protein 7; p 63.0 36 0.0012 23.8 14.8 59 128-192 169-232 (306)
327 3s94_A LRP-6, low-density lipo 62.9 57 0.002 26.1 15.0 151 26-188 84-247 (619)
328 2uvk_A YJHT; unknown function, 60.9 43 0.0015 24.1 13.7 60 129-193 286-351 (357)
329 1bpo_A Protein (clathrin); cla 58.0 64 0.0022 25.0 15.4 157 26-188 106-293 (494)
330 4a0p_A LRP6, LRP-6, low-densit 57.7 72 0.0025 25.6 19.3 147 26-184 37-197 (628)
331 2vpj_A Kelch-like protein 12; 57.2 46 0.0016 23.2 16.7 65 122-192 164-238 (301)
332 4asc_A Kelch repeat and BTB do 56.1 50 0.0017 23.3 16.1 59 128-192 165-228 (315)
333 3das_A Putative oxidoreductase 55.8 31 0.0011 25.4 5.9 33 153-185 31-63 (347)
334 3zwu_A Alkaline phosphatase PH 53.8 38 0.0013 27.0 6.4 59 28-92 478-548 (592)
335 3al9_A Plexin-A2; beta-propell 49.7 80 0.0027 24.9 7.6 71 108-179 401-476 (539)
336 4gz8_A Semaphorin-3A; multi-do 48.2 86 0.0029 25.5 7.7 61 119-179 430-495 (667)
337 2p9w_A MAL S 1 allergenic prot 46.5 84 0.0029 23.0 13.5 37 22-59 9-45 (334)
338 1q47_A Semaphorin 3A; beta pro 43.2 94 0.0032 24.2 7.0 72 108-179 405-487 (495)
339 2xzh_A Clathrin heavy chain 1; 43.0 1E+02 0.0034 22.9 18.0 158 25-188 106-294 (365)
340 2xzh_A Clathrin heavy chain 1; 39.7 1.1E+02 0.0039 22.6 14.1 72 107-185 107-190 (365)
341 2g8s_A Glucose/sorbosone dehyd 39.4 56 0.0019 23.8 5.1 28 155-183 19-47 (353)
342 1olz_A Semaphorin 4D; developm 38.8 1.5E+02 0.0051 24.1 7.8 58 120-179 417-477 (663)
343 3nvq_A Semaphorin-7A; beta-pro 35.8 1.3E+02 0.0046 24.0 6.9 61 119-179 381-444 (590)
344 4a9v_A PHOX; hydrolase, beta-p 35.7 1.5E+02 0.0052 23.7 7.1 17 26-44 476-492 (592)
345 1xi4_A Clathrin heavy chain; a 33.3 2.9E+02 0.0099 25.4 12.4 173 10-188 86-293 (1630)
346 3sbq_A Nitrous-oxide reductase 32.7 2E+02 0.0067 23.3 10.9 99 74-172 322-453 (638)
347 2zwa_A Leucine carboxyl methyl 31.7 2.1E+02 0.0071 23.2 12.1 62 122-186 505-579 (695)
348 3ol2_B Plexin-B1; beta-propell 31.4 1.9E+02 0.0066 22.8 8.2 70 108-179 388-461 (528)
349 2ism_A Putative oxidoreductase 31.4 1.5E+02 0.0051 21.5 9.9 71 107-184 31-114 (352)
350 2be1_A Serine/threonine-protei 30.5 1.2E+02 0.004 22.3 5.5 59 122-185 14-77 (339)
351 1xi4_A Clathrin heavy chain; a 29.2 3.4E+02 0.012 24.9 9.9 72 107-185 106-189 (1630)
352 4a0p_A LRP6, LRP-6, low-densit 29.2 2.2E+02 0.0076 22.8 19.6 151 26-184 340-508 (628)
353 1ukf_A Avirulence protein AVRP 28.2 97 0.0033 20.5 4.2 37 23-60 116-152 (188)
354 3a9g_A Putative uncharacterize 28.2 1.7E+02 0.0059 21.2 10.0 72 107-184 29-114 (354)
355 3sbq_A Nitrous-oxide reductase 28.0 67 0.0023 25.8 4.0 30 156-185 325-355 (638)
356 3ei3_A DNA damage-binding prot 26.2 3.3E+02 0.011 23.9 16.9 36 25-60 553-593 (1158)
357 3zwu_A Alkaline phosphatase PH 24.2 2.8E+02 0.0095 22.2 7.2 19 153-171 530-548 (592)
358 2woz_A Kelch repeat and BTB do 24.2 1.9E+02 0.0064 20.2 15.0 59 128-192 175-238 (318)
359 1zso_A Hypothetical protein; s 21.7 75 0.0026 20.6 2.8 37 156-193 112-148 (164)
No 1
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.97 E-value=1.3e-29 Score=186.79 Aligned_cols=173 Identities=16% Similarity=0.238 Sum_probs=147.6
Q ss_pred cccccccceeeee----------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCC
Q psy13207 6 LQSEKCLNQWTRR----------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPT 75 (197)
Q Consensus 6 ~~~~~~~~~w~~~----------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~ 75 (197)
+..|+++++|++. ..+.+|...|.+++|+|+ +.+|++|+.|++|++||+.+++.+..+. .+..
T Consensus 36 ~s~D~~v~~W~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~d--g~~l~s~s~D~~v~~wd~~~~~~~~~~~-----~h~~ 108 (319)
T 3frx_A 36 ASRDKTLISWKLTGDDQKFGVPVRSFKGHSHIVQDCTLTAD--GAYALSASWDKTLRLWDVATGETYQRFV-----GHKS 108 (319)
T ss_dssp EETTSEEEEEEEEEETTEEEEEEEEEECCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTEEEEEEE-----CCSS
T ss_pred ecCCccEEEecCCCCCccccccceEEeCCcccEEEEEECCC--CCEEEEEeCCCEEEEEECCCCCeeEEEc-----cCCC
Confidence 4678999999864 357899999999999999 9999999999999999999876543322 2367
Q ss_pred CeeeEEEccCCCcccce-----eEEEE-----eeEecccCCCceeEEEEcCC------CeEEEEeeCCCeEEEEEccCCc
Q psy13207 76 LASCLTWNHSFSRFNSI-----SIMYE-----AHSINAEHKDLIHDVAYDYY------GLRMATCSSDQNIKVTRDVMGT 139 (197)
Q Consensus 76 ~~~~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~i~~~~~~~~------~~~~~s~~~d~~i~~~d~~~~~ 139 (197)
.|.+++|+|++..++++ +++|+ +..+. +|...|.+++|++. ...+++++.|+.|++||+++
T Consensus 109 ~v~~~~~~~~~~~l~s~s~D~~i~vwd~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~l~s~~~d~~i~~wd~~~-- 185 (319)
T 3frx_A 109 DVMSVDIDKKASMIISGSRDKTIKVWTIKGQCLATLL-GHNDWVSQVRVVPNEKADDDSVTIISAGNDKMVKAWNLNQ-- 185 (319)
T ss_dssp CEEEEEECTTSCEEEEEETTSCEEEEETTSCEEEEEC-CCSSCEEEEEECCC------CCEEEEEETTSCEEEEETTT--
T ss_pred cEEEEEEcCCCCEEEEEeCCCeEEEEECCCCeEEEEe-ccCCcEEEEEEccCCCCCCCccEEEEEeCCCEEEEEECCc--
Confidence 89999999999998776 89999 56677 89999999999842 23459999999999999976
Q ss_pred ccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 140 RFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 140 ~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
......+.+|...|.+++|+|+|++|++++.||+|++||+++.+....+
T Consensus 186 ---~~~~~~~~~h~~~v~~~~~sp~g~~l~s~~~dg~i~iwd~~~~~~~~~~ 234 (319)
T 3frx_A 186 ---FQIEADFIGHNSNINTLTASPDGTLIASAGKDGEIMLWNLAAKKAMYTL 234 (319)
T ss_dssp ---TEEEEEECCCCSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred ---chhheeecCCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 5677788899999999999999999999999999999999987655444
No 2
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=1.6e-29 Score=184.97 Aligned_cols=175 Identities=15% Similarity=0.216 Sum_probs=143.2
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeee
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~ 79 (197)
+..|+++++|++. ..+.+|.+.|.+++|+|+ +.+|++|+.|++|++||++++..+ ...+. +...|.+
T Consensus 73 ~s~d~~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~sgs~D~~v~lWd~~~~~~~-----~~~~~~h~~~v~~ 145 (304)
T 2ynn_A 73 GSDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPT--KPYVLSGSDDLTVKLWNWENNWAL-----EQTFEGHEHFVMC 145 (304)
T ss_dssp EETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSS--SSEEEEEETTSCEEEEEGGGTTEE-----EEEECCCCSCEEE
T ss_pred ECCCCEEEEEECCCCcEEEEEeCCCCcEEEEEEcCC--CCEEEEECCCCeEEEEECCCCcch-----hhhhcccCCcEEE
Confidence 4568899999864 468899999999999999 999999999999999999875332 12222 3678999
Q ss_pred EEEcc-CCCcccce-----eEEEEe------eEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceee
Q psy13207 80 LTWNH-SFSRFNSI-----SIMYEA------HSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIET 145 (197)
Q Consensus 80 ~~~~~-~~~~~~~~-----~~~~~~------~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~ 145 (197)
++|+| ++..++++ +++||+ ..+...|...+..++|+ ++.-+|++++.|+.|++||+++ ..+
T Consensus 146 v~~~p~~~~~l~sgs~D~~v~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~s~s~D~~i~iWd~~~-----~~~ 220 (304)
T 2ynn_A 146 VAFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT-----KSC 220 (304)
T ss_dssp EEECTTCTTEEEEEETTSEEEEEETTCSSCSEEEECCCTTCEEEEEECCSTTCCEEEEEETTSEEEEEETTT-----TEE
T ss_pred EEECCCCCCEEEEEeCCCeEEEEECCCCCccceeccCCcCcEEEEEEEEcCCCCEEEEEcCCCeEEEEeCCC-----Ccc
Confidence 99999 45667665 899992 23332567889999997 3443449999999999999987 678
Q ss_pred eeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 146 IGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 146 ~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
+..+.+|...|.+++|+|++++|++|+.||+|++||+++.+....+.
T Consensus 221 ~~~~~~h~~~v~~~~~~p~~~~l~s~s~Dg~i~iWd~~~~~~~~~~~ 267 (304)
T 2ynn_A 221 VATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTLN 267 (304)
T ss_dssp EEEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred ceeeCCCCCCEEEEEECCCCCEEEEEcCCCeEEEEECCCCceeeecc
Confidence 88899999999999999999999999999999999999877655544
No 3
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.97 E-value=1.6e-29 Score=186.54 Aligned_cols=176 Identities=16% Similarity=0.193 Sum_probs=149.3
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..|+++++|++. ..+..|...+.+++|+|+ +++|++++.||.|++|++.+++....+. .....+.++
T Consensus 98 ~s~D~~i~lWd~~~~~~~~~~~~~~~~~~~~~~spd--g~~l~~g~~dg~v~i~~~~~~~~~~~~~-----~~~~~v~~~ 170 (321)
T 3ow8_A 98 SSLDAHIRLWDLENGKQIKSIDAGPVDAWTLAFSPD--SQYLATGTHVGKVNIFGVESGKKEYSLD-----TRGKFILSI 170 (321)
T ss_dssp EETTSEEEEEETTTTEEEEEEECCTTCCCCEEECTT--SSEEEEECTTSEEEEEETTTCSEEEEEE-----CSSSCEEEE
T ss_pred EeCCCcEEEEECCCCCEEEEEeCCCccEEEEEECCC--CCEEEEEcCCCcEEEEEcCCCceeEEec-----CCCceEEEE
Confidence 4678999999864 357788899999999999 9999999999999999998876432221 125679999
Q ss_pred EEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeee
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF 149 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 149 (197)
+|+|++++++++ +++|| +..+. +|...|.+++|+|+.-+|++++.|+.|++||+++ ......+
T Consensus 171 ~~spdg~~lasg~~dg~i~iwd~~~~~~~~~~~-~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~-----~~~~~~~ 244 (321)
T 3ow8_A 171 AYSPDGKYLASGAIDGIINIFDIATGKLLHTLE-GHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQH-----ANLAGTL 244 (321)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCCCEEEECTTSCEEEEECTTSCEEEEETTT-----CCEEEEE
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCcEEEEEc-ccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCC-----cceeEEE
Confidence 999999998876 89999 56677 8999999999995554459999999999999976 5677888
Q ss_pred cCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 150 EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 150 ~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
.+|...|.+++|+|++++|++++.|++|++||+++++....+..+
T Consensus 245 ~~h~~~v~~~~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~h 289 (321)
T 3ow8_A 245 SGHASWVLNVAFCPDDTHFVSSSSDKSVKVWDVGTRTCVHTFFDH 289 (321)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred cCCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCCCEEEEEEcCC
Confidence 999999999999999999999999999999999988776655443
No 4
>3ow8_A WD repeat-containing protein 61; structural genomics consortium, SGC, transcriptio; 2.30A {Homo sapiens}
Probab=99.97 E-value=3.5e-29 Score=184.66 Aligned_cols=174 Identities=14% Similarity=0.228 Sum_probs=147.3
Q ss_pred cccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 6 LQSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
+..|+++++|+.. ..+.+|...|.+++|+|+ +..+++++.|++|++||+.+++.+..+. .+...+.
T Consensus 54 gs~D~~v~vW~~~~~~~~~~~~l~gh~~~v~~~~~~~~--~~~l~s~s~D~~i~lWd~~~~~~~~~~~-----~~~~~~~ 126 (321)
T 3ow8_A 54 GSLDDLVKVWKWRDERLDLQWSLEGHQLGVVSVDISHT--LPIAASSSLDAHIRLWDLENGKQIKSID-----AGPVDAW 126 (321)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECSS--SSEEEEEETTSEEEEEETTTTEEEEEEE-----CCTTCCC
T ss_pred EcCCCCEEEEECCCCCeeeeeeeccCCCCEEEEEECCC--CCEEEEEeCCCcEEEEECCCCCEEEEEe-----CCCccEE
Confidence 5678999999864 257899999999999998 9999999999999999999876543332 1256788
Q ss_pred eEEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeee
Q psy13207 79 CLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIG 147 (197)
Q Consensus 79 ~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 147 (197)
+++|+|++++++++ +++|+ ...+. .|...+.+++|+++.-+|++|+.|+.|++||+++ .+.+.
T Consensus 127 ~~~~spdg~~l~~g~~dg~v~i~~~~~~~~~~~~~-~~~~~v~~~~~spdg~~lasg~~dg~i~iwd~~~-----~~~~~ 200 (321)
T 3ow8_A 127 TLAFSPDSQYLATGTHVGKVNIFGVESGKKEYSLD-TRGKFILSIAYSPDGKYLASGAIDGIINIFDIAT-----GKLLH 200 (321)
T ss_dssp CEEECTTSSEEEEECTTSEEEEEETTTCSEEEEEE-CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-----TEEEE
T ss_pred EEEECCCCCEEEEEcCCCcEEEEEcCCCceeEEec-CCCceEEEEEECCCCCEEEEEcCCCeEEEEECCC-----CcEEE
Confidence 99999999998775 79999 44556 7888999999995544459999999999999987 67788
Q ss_pred eecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 148 NFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 148 ~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
.+.+|..+|.+++|+|++++|++++.|++|++||+++......+.
T Consensus 201 ~~~~h~~~v~~l~~spd~~~l~s~s~dg~i~iwd~~~~~~~~~~~ 245 (321)
T 3ow8_A 201 TLEGHAMPIRSLTFSPDSQLLVTASDDGYIKIYDVQHANLAGTLS 245 (321)
T ss_dssp EECCCSSCCCEEEECTTSCEEEEECTTSCEEEEETTTCCEEEEEC
T ss_pred EEcccCCceeEEEEcCCCCEEEEEcCCCeEEEEECCCcceeEEEc
Confidence 899999999999999999999999999999999998876555443
No 5
>2ynn_A Coatomer subunit beta'; protein transport, peptide binding protein, membrane traffic COPI-mediated trafficking, dilysine motifs; 1.78A {Saccharomyces cerevisiae} PDB: 2yno_A
Probab=99.97 E-value=3.4e-29 Score=183.27 Aligned_cols=160 Identities=16% Similarity=0.150 Sum_probs=135.9
Q ss_pred eeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---
Q psy13207 16 TRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--- 92 (197)
Q Consensus 16 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 92 (197)
++..+|.+|.+.|.+++|+|+ +.+|++++.||+|++||+.++..+..+. .+..++.+++|+|++++++++
T Consensus 4 ~~~~~~~~h~~~V~~~~fsp~--~~~l~s~~~dg~v~lWd~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~s~s~d 76 (304)
T 2ynn_A 4 DIKKTFSNRSDRVKGIDFHPT--EPWVLTTLYSGRVELWNYETQVEVRSIQ-----VTETPVRAGKFIARKNWIIVGSDD 76 (304)
T ss_dssp CCEEEEEEECSCEEEEEECSS--SSEEEEEETTSEEEEEETTTTEEEEEEE-----CCSSCEEEEEEEGGGTEEEEEETT
T ss_pred eeEEeecCCCCceEEEEECCC--CCEEEEEcCCCcEEEEECCCCceeEEee-----ccCCcEEEEEEeCCCCEEEEECCC
Confidence 456678999999999999999 9999999999999999998876543322 125689999999999998776
Q ss_pred --eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEcc-
Q psy13207 93 --SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNI- 163 (197)
Q Consensus 93 --~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p- 163 (197)
+++|+ +..+. +|...|.+++|+|+.-+|++|+.|+.|++||+++. ......+.+|...|.+++|+|
T Consensus 77 ~~i~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sgs~D~~v~lWd~~~~----~~~~~~~~~h~~~v~~v~~~p~ 151 (304)
T 2ynn_A 77 FRIRVFNYNTGEKVVDFE-AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN----WALEQTFEGHEHFVMCVAFNPK 151 (304)
T ss_dssp SEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEEGGGT----TEEEEEECCCCSCEEEEEECTT
T ss_pred CEEEEEECCCCcEEEEEe-CCCCcEEEEEEcCCCCEEEEECCCCeEEEEECCCC----cchhhhhcccCCcEEEEEECCC
Confidence 89999 56677 89999999999955544599999999999999752 245567889999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 164 TGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 164 ~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
++.+|++|+.|++|++||+++...
T Consensus 152 ~~~~l~sgs~D~~v~iwd~~~~~~ 175 (304)
T 2ynn_A 152 DPSTFASGCLDRTVKVWSLGQSTP 175 (304)
T ss_dssp CTTEEEEEETTSEEEEEETTCSSC
T ss_pred CCCEEEEEeCCCeEEEEECCCCCc
Confidence 679999999999999999976554
No 6
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.97 E-value=4.8e-29 Score=185.58 Aligned_cols=171 Identities=12% Similarity=0.132 Sum_probs=135.9
Q ss_pred cccccccceeeeee---------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCC
Q psy13207 6 LQSEKCLNQWTRRS---------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTL 76 (197)
Q Consensus 6 ~~~~~~~~~w~~~~---------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~ 76 (197)
+..|+++++|++.. .+.+|.+.|++++|+|+ |++|++|+.|++|++||+.+++.+..+. .+...
T Consensus 99 ~s~dg~v~lWd~~~~~~~~~~~~~~~~H~~~V~~v~~spd--g~~l~sgs~d~~i~iwd~~~~~~~~~~~-----~h~~~ 171 (344)
T 4gqb_B 99 ASDSGAVELWELDENETLIVSKFCKYEHDDIVSTVSVLSS--GTQAVSGSKDICIKVWDLAQQVVLSSYR-----AHAAQ 171 (344)
T ss_dssp EETTSEEEEEEECTTSSCEEEEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTTEEEEEEC-----CCSSC
T ss_pred EECCCEEEEEeccCCCceeEeeccccCCCCCEEEEEECCC--CCEEEEEeCCCeEEEEECCCCcEEEEEc-----CcCCc
Confidence 45689999998752 24589999999999999 9999999999999999999876543322 13678
Q ss_pred eeeEEEccCCCc-ccce-----eEEEE------eeEec-ccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEccCCcccc
Q psy13207 77 ASCLTWNHSFSR-FNSI-----SIMYE------AHSIN-AEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFD 142 (197)
Q Consensus 77 ~~~~~~~~~~~~-~~~~-----~~~~~------~~~~~-~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~ 142 (197)
|.+++|+|++.. ++++ +++|| +..+. ..|...+.+++|++ +..+|++|+.|+.|++||+++
T Consensus 172 V~~~~~~~~~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~l~sg~~dg~v~~wd~~~----- 246 (344)
T 4gqb_B 172 VTCVAASPHKDSVFLSCSEDNRILLWDTRCPKPASQIGCSAPGYLPTSLAWHPQQSEVFVFGDENGTVSLVDTKS----- 246 (344)
T ss_dssp EEEEEECSSCTTEEEEEETTSCEEEEETTSSSCEEECC----CCCEEEEEECSSCTTEEEEEETTSEEEEEESCC-----
T ss_pred eEEEEecCCCCCceeeeccccccccccccccceeeeeecceeeccceeeeecCCCCcceEEeccCCcEEEEECCC-----
Confidence 999999999875 4443 89999 33332 14566789999983 333338999999999999987
Q ss_pred eeeeeeecCceecEEEEEEccCC-CEEEEEeCCCcEEEEEcCCCcch
Q psy13207 143 IETIGNFEDHYCTVWRVSWNITG-TIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 143 ~~~~~~~~~h~~~v~~~~~~p~~-~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
.+++..+.+|...|++++|+|++ ++|++|+.|++|++||+++++..
T Consensus 247 ~~~~~~~~~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~~~~~ 293 (344)
T 4gqb_B 247 TSCVLSSAVHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSLSELF 293 (344)
T ss_dssp --CCEEEECCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTCCEEE
T ss_pred CcEEEEEcCCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCCCcEE
Confidence 67788899999999999999997 68999999999999999876543
No 7
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.97 E-value=3.9e-28 Score=180.65 Aligned_cols=170 Identities=20% Similarity=0.316 Sum_probs=138.8
Q ss_pred cccccccceeeeee--------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCC
Q psy13207 6 LQSEKCLNQWTRRS--------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTL 76 (197)
Q Consensus 6 ~~~~~~~~~w~~~~--------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~ 76 (197)
+..|+++++|+... ...+|...|.+++|+|+ +++|++|+.|+++++|++..... .....+. +...
T Consensus 34 ~~~D~~i~iw~~~~~~~~~~~~~~~~h~~~v~~~~~sp~--g~~l~s~s~D~~v~iw~~~~~~~----~~~~~~~~h~~~ 107 (345)
T 3fm0_A 34 CGGDRRIRIWGTEGDSWICKSVLSEGHQRTVRKVAWSPC--GNYLASASFDATTCIWKKNQDDF----ECVTTLEGHENE 107 (345)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECSSCSSCEEEEEECTT--SSEEEEEETTSCEEEEEECCC-E----EEEEEECCCSSC
T ss_pred EcCCCeEEEEEcCCCcceeeeeeccccCCcEEEEEECCC--CCEEEEEECCCcEEEEEccCCCe----EEEEEccCCCCC
Confidence 46789999998753 13689999999999999 99999999999999999876532 1122333 3678
Q ss_pred eeeEEEccCCCcccce-----eEEEE---------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccc
Q psy13207 77 ASCLTWNHSFSRFNSI-----SIMYE---------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFD 142 (197)
Q Consensus 77 ~~~~~~~~~~~~~~~~-----~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~ 142 (197)
|.+++|+|++++|+++ +++|+ +..+. +|...|.+++|+|+.-+|++++.|+.|++||.++. .
T Consensus 108 v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~s~s~d~~i~~w~~~~~---~ 183 (345)
T 3fm0_A 108 VKSVAWAPSGNLLATCSRDKSVWVWEVDEEDEYECVSVLN-SHTQDVKHVVWHPSQELLASASYDDTVKLYREEED---D 183 (345)
T ss_dssp EEEEEECTTSSEEEEEETTSCEEEEEECTTSCEEEEEEEC-CCCSCEEEEEECSSSSCEEEEETTSCEEEEEEETT---E
T ss_pred ceEEEEeCCCCEEEEEECCCeEEEEECCCCCCeEEEEEec-CcCCCeEEEEECCCCCEEEEEeCCCcEEEEEecCC---C
Confidence 9999999999998876 79999 23455 89999999999944333499999999999998752 1
Q ss_pred eeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 143 IETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 143 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
..+...+.+|...|++++|+|+|++|++++.|++|++|+....
T Consensus 184 ~~~~~~~~~h~~~v~~l~~sp~g~~l~s~s~D~~v~iW~~~~~ 226 (345)
T 3fm0_A 184 WVCCATLEGHESTVWSLAFDPSGQRLASCSDDRTVRIWRQYLP 226 (345)
T ss_dssp EEEEEEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEEEECT
T ss_pred EEEEEEecCCCCceEEEEECCCCCEEEEEeCCCeEEEeccccC
Confidence 3456778899999999999999999999999999999997543
No 8
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.96 E-value=2.1e-28 Score=186.08 Aligned_cols=176 Identities=16% Similarity=0.244 Sum_probs=149.5
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..|+++++|++. .++.+|...|.+++|+|+ +.+|++|+.|++|++||+.++..+..+. .+...+.++
T Consensus 168 gs~D~~i~iwd~~~~~~~~~~~~h~~~V~~v~~~p~--~~~l~s~s~D~~i~~wd~~~~~~~~~~~-----~h~~~v~~~ 240 (410)
T 1vyh_C 168 CSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPN--GDHIVSASRDKTIKMWEVQTGYCVKTFT-----GHREWVRMV 240 (410)
T ss_dssp EETTSCCCEEETTSSCEEECCCCCSSCEEEEEECSS--SSEEEEEETTSEEEEEETTTCCEEEEEE-----CCSSCEEEE
T ss_pred EeCCCeEEEEeCCCCceeEEEcCCCCCEEEEEEeCC--CCEEEEEeCCCeEEEEECCCCcEEEEEe-----CCCccEEEE
Confidence 4678999999754 457899999999999998 9999999999999999999876543332 125679999
Q ss_pred EEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCC--------------------CeEEEEeeCCCe
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYY--------------------GLRMATCSSDQN 129 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~--------------------~~~~~s~~~d~~ 129 (197)
.|+|++..++++ +++|+ ...+. .|...|.+++|+++ .-+|++|+.|+.
T Consensus 241 ~~~~~g~~l~s~s~D~~v~vwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~ 319 (410)
T 1vyh_C 241 RPNQDGTLIASCSNDQTVRVWVVATKECKAELR-EHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKT 319 (410)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSE
T ss_pred EECCCCCEEEEEcCCCeEEEEECCCCceeeEec-CCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCe
Confidence 999999998776 89999 55666 89999999999853 223499999999
Q ss_pred EEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 130 IKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 130 i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
|++||+++ ..++..+.+|...|.+++|+|+|++|++++.||+|++||+++++....+..+
T Consensus 320 i~iwd~~~-----~~~~~~~~~h~~~v~~v~~~~~g~~l~s~s~D~~i~vwd~~~~~~~~~~~~h 379 (410)
T 1vyh_C 320 IKMWDVST-----GMCLMTLVGHDNWVRGVLFHSGGKFILSCADDKTLRVWDYKNKRCMKTLNAH 379 (410)
T ss_dssp EEEEETTT-----TEEEEEEECCSSCEEEEEECSSSSCEEEEETTTEEEEECCTTSCCCEEEECC
T ss_pred EEEEECCC-----CceEEEEECCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECCCCceEEEEcCC
Confidence 99999987 6778888999999999999999999999999999999999888776665544
No 9
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.96 E-value=2.2e-28 Score=182.83 Aligned_cols=173 Identities=18% Similarity=0.239 Sum_probs=134.6
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..++.+++|++. ..+.+|...|++++|+|++ ..++++++.||+|++||+++++....... ......+.++
T Consensus 157 gs~dg~v~iwd~~~~~~~~~~~~h~~~v~~v~~s~~~-~~~~~s~~~dg~v~~wd~~~~~~~~~~~~---~~~~~~v~~v 232 (357)
T 4g56_B 157 GGKDFSVKVWDLSQKAVLKSYNAHSSEVNCVAACPGK-DTIFLSCGEDGRILLWDTRKPKPATRIDF---CASDTIPTSV 232 (357)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTTC-SSCEEEEETTSCEEECCTTSSSCBCBCCC---TTCCSCEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEEcCCCCCEEEEEEccCC-CceeeeeccCCceEEEECCCCceeeeeee---ccccccccch
Confidence 4678899999764 4688999999999999972 35789999999999999988765433221 1125678999
Q ss_pred EEccCCCc-ccce-----eEEEE------eeEecccCCCceeEEEEcC---CCeEEEEeeCCCeEEEEEccCCcccceee
Q psy13207 81 TWNHSFSR-FNSI-----SIMYE------AHSINAEHKDLIHDVAYDY---YGLRMATCSSDQNIKVTRDVMGTRFDIET 145 (197)
Q Consensus 81 ~~~~~~~~-~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~---~~~~~~s~~~d~~i~~~d~~~~~~~~~~~ 145 (197)
+|+|++.. ++++ +++|| +..+. +|...|++++|++ .++ ++|+.|+.|++||+++ .+.
T Consensus 233 ~~sp~~~~~la~g~~d~~i~~wd~~~~~~~~~~~-~~~~~v~~l~~sp~~~~~l--asgs~D~~i~iwd~~~-----~~~ 304 (357)
T 4g56_B 233 TWHPEKDDTFACGDETGNVSLVNIKNPDSAQTSA-VHSQNITGLAYSYHSSPFL--ASISEDCTVAVLDADF-----SEV 304 (357)
T ss_dssp EECTTSTTEEEEEESSSCEEEEESSCGGGCEEEC-CCSSCEEEEEECSSSSCCE--EEEETTSCEEEECTTS-----CEE
T ss_pred hhhhcccceEEEeecccceeEEECCCCcEeEEEe-ccceeEEEEEEcCCCCCEE--EEEeCCCEEEEEECCC-----CcE
Confidence 99998654 5544 89999 66677 8999999999983 345 9999999999999976 444
Q ss_pred eeeecCceecEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 146 IGNFEDHYCTVWRVSWNI-TGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 146 ~~~~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
+. ..+|...|++++|+| ++++|++++.||+|++|++...++...+
T Consensus 305 ~~-~~~H~~~V~~vafsP~d~~~l~s~s~Dg~v~iW~~~~~~~~~~~ 350 (357)
T 4g56_B 305 FR-DLSHRDFVTGVAWSPLDHSKFTTVGWDHKVLHHHLPSEGRTENL 350 (357)
T ss_dssp EE-ECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECC--------
T ss_pred eE-ECCCCCCEEEEEEeCCCCCEEEEEcCCCeEEEEECCCCCccccc
Confidence 44 447999999999999 7999999999999999999876554443
No 10
>1vyh_C Platelet-activating factor acetylhydrolase IB alpha subunit; lissencephaly, platelet activacting factor, regulator of cytoplasmic dynein; 3.4A {Mus musculus} SCOP: b.69.4.1
Probab=99.96 E-value=2.2e-28 Score=185.99 Aligned_cols=175 Identities=19% Similarity=0.322 Sum_probs=148.1
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..|+++++|+.. ..+.+|.+.|.+++|+|+ +++|++|+.|++|++||+.+.+.+..+. .+...|.++
T Consensus 126 ~s~Dg~i~vwd~~~~~~~~~l~~h~~~V~~v~~~~~--~~~l~sgs~D~~i~iwd~~~~~~~~~~~-----~h~~~V~~v 198 (410)
T 1vyh_C 126 ASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHS--GKLLASCSADMTIKLWDFQGFECIRTMH-----GHDHNVSSV 198 (410)
T ss_dssp EESSSCEEEEETTTCCCCEEECCCSSCEEEEEECTT--SSEEEEEETTSCCCEEETTSSCEEECCC-----CCSSCEEEE
T ss_pred EeCCCeEEEEECCCCcEEEEEeccCCcEEEEEEcCC--CCEEEEEeCCCeEEEEeCCCCceeEEEc-----CCCCCEEEE
Confidence 4578999999854 468899999999999998 9999999999999999998765443322 126789999
Q ss_pred EEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeee
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF 149 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 149 (197)
+|+|++.+++++ +++|| +..+. +|...|.+++|+++.-+|++|+.|+.|++||+++ ......+
T Consensus 199 ~~~p~~~~l~s~s~D~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~g~~l~s~s~D~~v~vwd~~~-----~~~~~~~ 272 (410)
T 1vyh_C 199 SIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFT-GHREWVRMVRPNQDGTLIASCSNDQTVRVWVVAT-----KECKAEL 272 (410)
T ss_dssp EECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-----CCEEEEE
T ss_pred EEeCCCCEEEEEeCCCeEEEEECCCCcEEEEEe-CCCccEEEEEECCCCCEEEEEcCCCeEEEEECCC-----CceeeEe
Confidence 999999998766 89999 56777 8999999999995444449999999999999976 5677788
Q ss_pred cCceecEEEEEEccC--------------------CCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 150 EDHYCTVWRVSWNIT--------------------GTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 150 ~~h~~~v~~~~~~p~--------------------~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
.+|...|.+++|+|+ |.+|++|+.|++|++||++++.....+..
T Consensus 273 ~~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~l~sgs~D~~i~iwd~~~~~~~~~~~~ 336 (410)
T 1vyh_C 273 REHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFLLSGSRDKTIKMWDVSTGMCLMTLVG 336 (410)
T ss_dssp CCCSSCEEEEEECCSCGGGGGGGCCSCC-------CCEEEEEETTSEEEEEETTTTEEEEEEEC
T ss_pred cCCCceEEEEEEcCcccccchhhhccccccccCCCCCEEEEEeCCCeEEEEECCCCceEEEEEC
Confidence 899999999999996 67999999999999999998776655443
No 11
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.96 E-value=5.5e-28 Score=179.60 Aligned_cols=166 Identities=16% Similarity=0.223 Sum_probs=137.4
Q ss_pred cccccccceeeee------------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc
Q psy13207 6 LQSEKCLNQWTRR------------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC 73 (197)
Q Consensus 6 ~~~~~~~~~w~~~------------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~ 73 (197)
+..|+++++|++. ..+.+|...|.+++|+|+ +.+|++|+.|++|++||+++++.+..+. .+
T Consensus 45 gs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~--~~~l~s~s~D~~v~lwd~~~~~~~~~~~-----~h 117 (343)
T 2xzm_R 45 GSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQE--NCFAISSSWDKTLRLWDLRTGTTYKRFV-----GH 117 (343)
T ss_dssp EETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSS--TTEEEEEETTSEEEEEETTSSCEEEEEE-----CC
T ss_pred EcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCC--CCEEEEEcCCCcEEEEECCCCcEEEEEc-----CC
Confidence 4678999999874 357899999999999998 9999999999999999999876543322 23
Q ss_pred CCCeeeEEEccCCCcccce-----eEEEEee-----Eec--ccCCCceeEEEEcCCC----------eEEEEeeCCCeEE
Q psy13207 74 PTLASCLTWNHSFSRFNSI-----SIMYEAH-----SIN--AEHKDLIHDVAYDYYG----------LRMATCSSDQNIK 131 (197)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~-----~~~~~~~-----~~~--~~~~~~i~~~~~~~~~----------~~~~s~~~d~~i~ 131 (197)
...|.+++|+|++++++++ +++|++. ... ..|...|.+++|++.. -+|++++.|+.|+
T Consensus 118 ~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~ 197 (343)
T 2xzm_R 118 QSEVYSVAFSPDNRQILSAGAEREIKLWNILGECKFSSAEKENHSDWVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLK 197 (343)
T ss_dssp CSCEEEEEECSSTTEEEEEETTSCEEEEESSSCEEEECCTTTSCSSCEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEE
T ss_pred CCcEEEEEECCCCCEEEEEcCCCEEEEEeccCCceeeeecccCCCceeeeeeeccccccccccCCCCCEEEEEcCCCEEE
Confidence 6789999999999998766 8999931 111 1588899999999432 2349999999999
Q ss_pred EEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 132 VTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 132 ~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
+||.. ......+.+|...|.+++|+|+|++|++|+.||.|++||+..
T Consensus 198 iwd~~------~~~~~~~~~h~~~v~~~~~s~~g~~l~sgs~dg~v~iwd~~~ 244 (343)
T 2xzm_R 198 VWNTN------FQIRYTFKAHESNVNHLSISPNGKYIATGGKDKKLLIWDILN 244 (343)
T ss_dssp EEETT------TEEEEEEECCSSCEEEEEECTTSSEEEEEETTCEEEEEESSC
T ss_pred EEcCC------CceeEEEcCccccceEEEECCCCCEEEEEcCCCeEEEEECCC
Confidence 99954 456667889999999999999999999999999999999954
No 12
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.96 E-value=7.4e-28 Score=177.75 Aligned_cols=168 Identities=17% Similarity=0.145 Sum_probs=132.8
Q ss_pred eeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEEccCCCcccce--
Q psy13207 16 TRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTWNHSFSRFNSI-- 92 (197)
Q Consensus 16 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~-- 92 (197)
.+..+|++|.++|++++|+|+. +++|+||+.|++|+|||+.+.+...... ...+. +...|.+++|+|++++++++
T Consensus 29 ~l~~tL~GH~~~V~~v~~sp~~-~~~l~S~s~D~~i~vWd~~~~~~~~~~~-~~~l~~h~~~V~~~~~s~dg~~l~s~~~ 106 (340)
T 4aow_A 29 TLRGTLKGHNGWVTQIATTPQF-PDMILSASRDKTIIMWKLTRDETNYGIP-QRALRGHSHFVSDVVISSDGQFALSGSW 106 (340)
T ss_dssp EEEEEECCCSSCEEEEEECTTC-TTEEEEEETTSCEEEEEECCSSSCSEEE-EEEECCCSSCEEEEEECTTSSEEEEEET
T ss_pred EEEEEECCccCCEEEEEEeCCC-CCEEEEEcCCCeEEEEECCCCCccccee-eEEEeCCCCCEEEEEECCCCCEEEEEcc
Confidence 4556799999999999999962 6899999999999999998765332221 22333 36789999999999988665
Q ss_pred ---eEEEE-------------------------------------------------eeEecccCCCceeEEEEc--CCC
Q psy13207 93 ---SIMYE-------------------------------------------------AHSINAEHKDLIHDVAYD--YYG 118 (197)
Q Consensus 93 ---~~~~~-------------------------------------------------~~~~~~~~~~~i~~~~~~--~~~ 118 (197)
+++|+ ..... +|...+..++|+ +..
T Consensus 107 d~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~s~d~~~~~~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ 185 (340)
T 4aow_A 107 DGTLRLWDLTTGTTTRRFVGHTKDVLSVAFSSDNRQIVSGSRDKTIKLWNTLGVCKYTVQDE-SHSEWVSCVRFSPNSSN 185 (340)
T ss_dssp TSEEEEEETTTTEEEEEEECCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSS-SCSSCEEEEEECSCSSS
T ss_pred cccceEEeecccceeeeecCCCCceeEEEEeecCccceeecCCCeEEEEEeCCCceEEEEec-cccCcccceEEccCCCC
Confidence 33444 11122 677888999998 444
Q ss_pred eEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 119 LRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 119 ~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
.++++++.|+.|++||+++ .+.+..+.+|...|.+++|+|++++|++|+.||+|++||+++.+....+
T Consensus 186 ~~~~s~~~d~~i~i~d~~~-----~~~~~~~~~h~~~v~~~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~ 253 (340)
T 4aow_A 186 PIIVSCGWDKLVKVWNLAN-----CKLKTNHIGHTGYLNTVTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTL 253 (340)
T ss_dssp CEEEEEETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEECTTSSEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred cEEEEEcCCCEEEEEECCC-----CceeeEecCCCCcEEEEEECCCCCEEEEEeCCCeEEEEEeccCceeeee
Confidence 4458999999999999976 6778888999999999999999999999999999999999987655443
No 13
>4gqb_B Methylosome protein 50; TIM barrel, beta-propeller, methyltransferase, methylation, transferase-protein binding complex; HET: 0XU; 2.06A {Homo sapiens}
Probab=99.96 E-value=7e-28 Score=179.31 Aligned_cols=169 Identities=18% Similarity=0.221 Sum_probs=134.3
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCC-cEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLG-LVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
+..|+++++|++. ..+.+|.+.|.+++|+|+ + .+|++|+.|++|++||+++++....+... .....+.+
T Consensus 145 gs~d~~i~iwd~~~~~~~~~~~~h~~~V~~~~~~~~--~~~~l~s~s~D~~v~iwd~~~~~~~~~~~~~---~~~~~~~~ 219 (344)
T 4gqb_B 145 GSKDICIKVWDLAQQVVLSSYRAHAAQVTCVAASPH--KDSVFLSCSEDNRILLWDTRCPKPASQIGCS---APGYLPTS 219 (344)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECSS--CTTEEEEEETTSCEEEEETTSSSCEEECC-------CCCEEE
T ss_pred EeCCCeEEEEECCCCcEEEEEcCcCCceEEEEecCC--CCCceeeeccccccccccccccceeeeeecc---eeecccee
Confidence 4678999999854 468899999999999998 5 57899999999999999987654332211 12456889
Q ss_pred EEEccCCCc-ccce-----eEEEE------eeEecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 80 LTWNHSFSR-FNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 80 ~~~~~~~~~-~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
++|+|++.. ++++ +++|| +..+. +|...|++++|+|+. -+|++|+.|+.|++||.++ .+ +
T Consensus 220 ~~~~p~~~~~l~sg~~dg~v~~wd~~~~~~~~~~~-~h~~~v~~v~fsp~g~~~lasgs~D~~i~vwd~~~-----~~-~ 292 (344)
T 4gqb_B 220 LAWHPQQSEVFVFGDENGTVSLVDTKSTSCVLSSA-VHSQCVTGLVFSPHSVPFLASLSEDCSLAVLDSSL-----SE-L 292 (344)
T ss_dssp EEECSSCTTEEEEEETTSEEEEEESCC--CCEEEE-CCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTC-----CE-E
T ss_pred eeecCCCCcceEEeccCCcEEEEECCCCcEEEEEc-CCCCCEEEEEEccCCCeEEEEEeCCCeEEEEECCC-----Cc-E
Confidence 999997654 5544 89999 66777 899999999999432 2239999999999999975 33 4
Q ss_pred eeecCceecEEEEEEccCCC-EEEEEeCCCcEEEEEcCCCc
Q psy13207 147 GNFEDHYCTVWRVSWNITGT-IVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~-~l~~~~~dg~i~iw~~~~~~ 186 (197)
..+.+|...|++++|+|+++ +|++++.|++|++|++.+..
T Consensus 293 ~~~~~H~~~V~~v~~sp~~~~llas~s~D~~v~~w~v~~~~ 333 (344)
T 4gqb_B 293 FRSQAHRDFVRDATWSPLNHSLLTTVGWDHQVVHHVVPTEP 333 (344)
T ss_dssp EEECCCSSCEEEEEECSSSTTEEEEEETTSCEEEEECCC--
T ss_pred EEEcCCCCCEEEEEEeCCCCeEEEEEcCCCeEEEEECCCCC
Confidence 45789999999999999875 67799999999999998643
No 14
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=8.4e-28 Score=175.37 Aligned_cols=174 Identities=18% Similarity=0.224 Sum_probs=136.9
Q ss_pred cccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCe
Q psy13207 6 LQSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLA 77 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~ 77 (197)
+..|+++++|++. .++.+|.++|.+++|+|...+++|+||+.|++|++||+.+++... ...+. +...|
T Consensus 27 ~s~D~~v~iw~~~~~~~~~~~~l~gH~~~V~~v~~s~~~~g~~l~s~s~D~~v~iWd~~~~~~~~----~~~~~~h~~~v 102 (297)
T 2pm7_B 27 CSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVMIWKEENGRWSQ----IAVHAVHSASV 102 (297)
T ss_dssp EETTSCEEEEEBCSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTTEEEEEEBSSSCBCC----CEEECCCSSCE
T ss_pred EeCCCEEEEEecCCCCcEEEEEEccccCCeEEEEecCCCcCCEEEEEcCCCEEEEEEcCCCceEE----EEEeecCCCce
Confidence 4678999999874 357899999999999863227899999999999999998764211 11222 36789
Q ss_pred eeEEEccC--CCcccce-----eEEEEe--------eEecccCCCceeEEEEcCCC-------------eEEEEeeCCCe
Q psy13207 78 SCLTWNHS--FSRFNSI-----SIMYEA--------HSINAEHKDLIHDVAYDYYG-------------LRMATCSSDQN 129 (197)
Q Consensus 78 ~~~~~~~~--~~~~~~~-----~~~~~~--------~~~~~~~~~~i~~~~~~~~~-------------~~~~s~~~d~~ 129 (197)
.+++|+|+ +..++++ +++|++ ..+. +|...|.+++|+|+. -+|++|+.|+.
T Consensus 103 ~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~ 181 (297)
T 2pm7_B 103 NSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSPIIID-AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNL 181 (297)
T ss_dssp EEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCCEEEE-CCSSCEEEEEECCCC------------CCEEEEEETTSC
T ss_pred eEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceeeeeee-cccCccceEeecCCcccccccCCCCCCcceEEEEcCCCc
Confidence 99999998 6777665 799993 2344 789999999999641 23499999999
Q ss_pred EEEEEccCCcccceeeeeeecCceecEEEEEEccCC---CEEEEEeCCCcEEEEEcCCC
Q psy13207 130 IKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITG---TIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 130 i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~---~~l~~~~~dg~i~iw~~~~~ 185 (197)
|++||+++... .......+.+|...|.+++|+|++ ++|++++.|++|++||++..
T Consensus 182 v~lwd~~~~~~-~~~~~~~l~~H~~~V~~v~~sp~~~~~~~las~s~D~~v~iWd~~~~ 239 (297)
T 2pm7_B 182 VKIWKYNSDAQ-TYVLESTLEGHSDWVRDVAWSPTVLLRSYMASVSQDRTCIIWTQDNE 239 (297)
T ss_dssp EEEEEEETTTT-EEEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESST
T ss_pred EEEEEEcCCCc-eEEEEEEecCCCCceEEEEECCCCCCceEEEEEECCCcEEEEEeCCC
Confidence 99999975321 123566788999999999999984 89999999999999999764
No 15
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=2e-27 Score=175.86 Aligned_cols=174 Identities=18% Similarity=0.292 Sum_probs=135.7
Q ss_pred cccccccceeeeee-------ee-cC-CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccc-cceeccceec-cC
Q psy13207 6 LQSEKCLNQWTRRS-------NL-VD-SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNL-SQWCLQHEVA-CP 74 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-------~~-~~-h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~-~~~~~~~~~~-~~ 74 (197)
+..|+++++|++.. .+ .+ |..+|.+++|+|+ +++|++|+.|++|+||++...... ........+. +.
T Consensus 30 ~~~D~~i~lw~~~~~~~~~~~~~~~~~h~~~v~~v~~sp~--~~~las~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~ 107 (330)
T 2hes_X 30 GSTDRKIKLVSVKYDDFTLIDVLDETAHKKAIRSVAWRPH--TSLLAAGSFDSTVSIWAKEESADRTFEMDLLAIIEGHE 107 (330)
T ss_dssp EESSSCEEEEECSSSCCEEEEEECTTCCCSCEEEEEECTT--SSEEEEEETTSCEEEEEC-------CCCEEEEEEC---
T ss_pred EcCCCEEEEEEecCCCeEEEEEEecCCccCCEEEEEECCC--CCEEEEEeCCCcEEEEEcccCcCccccceeEEEEcCCC
Confidence 46789999997642 24 34 9999999999998 999999999999999998643211 1112223333 36
Q ss_pred CCeeeEEEccCCCcccce-----eEEEEe----------eEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCc
Q psy13207 75 TLASCLTWNHSFSRFNSI-----SIMYEA----------HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGT 139 (197)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~-----~~~~~~----------~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~ 139 (197)
..|.+++|+|++++|+++ +++|++ ..+. +|...|.+++|+|+.-+|++++.|+.|++||..+.
T Consensus 108 ~~V~~v~~sp~g~~las~s~D~~v~iwd~~~~~~~~~~~~~~~-~h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~- 185 (330)
T 2hes_X 108 NEVKGVAWSNDGYYLATCSRDKSVWIWETDESGEEYECISVLQ-EHSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDD- 185 (330)
T ss_dssp -CEEEEEECTTSCEEEEEETTSCEEEEECCTTCCCCEEEEEEC-CCSSCEEEEEECSSSSEEEEEETTSCEEEEEEETT-
T ss_pred CcEEEEEECCCCCEEEEEeCCCEEEEEeccCCCCCeEEEEEec-cCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCC-
Confidence 789999999999998876 899994 3455 79999999999955444599999999999998651
Q ss_pred ccceeeeeeecCceecEEEEEEccC--CCEEEEEeCCCcEEEEEcCCC
Q psy13207 140 RFDIETIGNFEDHYCTVWRVSWNIT--GTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 140 ~~~~~~~~~~~~h~~~v~~~~~~p~--~~~l~~~~~dg~i~iw~~~~~ 185 (197)
...++..+.+|...|++++|+|+ +.+|++++.|++|++||++..
T Consensus 186 --~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~~ 231 (330)
T 2hes_X 186 --DWECVAVLNGHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMGD 231 (330)
T ss_dssp --EEEEEEEECCCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEEE
T ss_pred --CeeEEEEccCCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecCC
Confidence 13677889999999999999998 779999999999999998754
No 16
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.96 E-value=1.1e-27 Score=177.82 Aligned_cols=163 Identities=13% Similarity=0.165 Sum_probs=138.6
Q ss_pred eeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---
Q psy13207 16 TRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--- 92 (197)
Q Consensus 16 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 92 (197)
....++.+|.++|.+++|+|+ +++|++|+.||+|++||+.+++.+..+. .+...+.+++|+|++++++++
T Consensus 46 ~~~~~l~gH~~~v~~~~~s~d--~~~l~s~s~Dg~v~iWd~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~s~~~d 118 (340)
T 1got_B 46 RTRRTLRGHLAKIYAMHWGTD--SRLLLSASQDGKLIIWDSYTTNKVHAIP-----LRSSWVMTCAYAPSGNYVACGGLD 118 (340)
T ss_dssp CEEEEECCCSSCEEEEEECTT--SSEEEEEETTTEEEEEETTTCCEEEEEE-----CSSSCEEEEEECTTSSEEEEEETT
T ss_pred hhheeecCCCCceEEEEECCC--CCEEEEEeCCCcEEEEECCCCCcceEee-----cCCccEEEEEECCCCCEEEEEeCC
Confidence 445678999999999999999 9999999999999999998876543322 125679999999999998776
Q ss_pred --eEEEE----------eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEE
Q psy13207 93 --SIMYE----------AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159 (197)
Q Consensus 93 --~~~~~----------~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~ 159 (197)
+++|+ ...+. +|...|.++.|+ ...+ ++++.|+.|++||+++ ...+..+.+|...|.++
T Consensus 119 ~~v~iw~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~l--~s~s~d~~i~~wd~~~-----~~~~~~~~~h~~~v~~~ 190 (340)
T 1got_B 119 NICSIYNLKTREGNVRVSRELA-GHTGYLSCCRFLDDNQI--VTSSGDTTCALWDIET-----GQQTTTFTGHTGDVMSL 190 (340)
T ss_dssp CEEEEEETTTCSBSCEEEEEEE-CCSSCEEEEEEEETTEE--EEEETTSCEEEEETTT-----TEEEEEECCCSSCEEEE
T ss_pred CeEEEEECccCCCcceeEEEec-CCCccEEEEEECCCCcE--EEEECCCcEEEEECCC-----CcEEEEEcCCCCceEEE
Confidence 79998 23455 799999999999 5556 9999999999999977 67788889999999999
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 160 SWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 160 ~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
+|+|+++++++|+.|++|++||++++.....+..
T Consensus 191 ~~~~~~~~l~sg~~d~~v~~wd~~~~~~~~~~~~ 224 (340)
T 1got_B 191 SLAPDTRLFVSGACDASAKLWDVREGMCRQTFTG 224 (340)
T ss_dssp EECTTSSEEEEEETTSCEEEEETTTCSEEEEECC
T ss_pred EECCCCCEEEEEeCCCcEEEEECCCCeeEEEEcC
Confidence 9999999999999999999999998776555443
No 17
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.96 E-value=2.6e-27 Score=173.52 Aligned_cols=165 Identities=20% Similarity=0.291 Sum_probs=140.7
Q ss_pred ceeeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce
Q psy13207 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI 92 (197)
Q Consensus 13 ~~w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (197)
+.+.+..++.+|..+|.+++|+|+ +++|++++.||.|++|++.+++....+. .+...+.+++|+|++++++++
T Consensus 11 ~~~~~~~~~~gh~~~v~~~~~s~~--~~~l~s~~~dg~i~iw~~~~~~~~~~~~-----~h~~~v~~~~~~~~~~~l~s~ 83 (312)
T 4ery_A 11 PNYALKFTLAGHTKAVSSVKFSPN--GEWLASSSADKLIKIWGAYDGKFEKTIS-----GHKLGISDVAWSSDSNLLVSA 83 (312)
T ss_dssp CCCEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSEEEEE
T ss_pred CCceeEEEEcccCCcEEEEEECCC--CCEEEEeeCCCeEEEEeCCCcccchhhc-----cCCCceEEEEEcCCCCEEEEE
Confidence 456777889999999999999998 9999999999999999998765432221 236789999999999998766
Q ss_pred -----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEE
Q psy13207 93 -----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSW 161 (197)
Q Consensus 93 -----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~ 161 (197)
+++|+ +..+. +|...|.+++|+++.-+|++|+.|+.|++||+++ .+.+..+..|..+|.+++|
T Consensus 84 ~~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~i~iwd~~~-----~~~~~~~~~~~~~v~~~~~ 157 (312)
T 4ery_A 84 SDDKTLKIWDVSSGKCLKTLK-GHSNYVFCCNFNPQSNLIVSGSFDESVRIWDVKT-----GKCLKTLPAHSDPVSAVHF 157 (312)
T ss_dssp ETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSCEEEEETTT-----CCEEEEECCCSSCEEEEEE
T ss_pred CCCCEEEEEECCCCcEEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCC-----CEEEEEecCCCCcEEEEEE
Confidence 89999 56677 8999999999995443449999999999999986 6677888899999999999
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 162 NITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 162 ~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
+|++++|++++.||.|++||+++++....
T Consensus 158 ~~~~~~l~~~~~d~~i~~wd~~~~~~~~~ 186 (312)
T 4ery_A 158 NRDGSLIVSSSYDGLCRIWDTASGQCLKT 186 (312)
T ss_dssp CTTSSEEEEEETTSCEEEEETTTCCEEEE
T ss_pred cCCCCEEEEEeCCCcEEEEECCCCceeeE
Confidence 99999999999999999999988765443
No 18
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.96 E-value=5.4e-28 Score=181.24 Aligned_cols=166 Identities=13% Similarity=0.106 Sum_probs=130.1
Q ss_pred cccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..|+++++|++.. .+ .|...|.+++|+|+ |++|++++.| .+.+|+..++..+.... ...+...+.++
T Consensus 153 ~~~d~~i~iwd~~~~~~~~~~-~~~~~V~~v~fspd--g~~l~s~s~~-~~~~~~~~~~~~~~~~~---~~~~~~~v~~v 225 (365)
T 4h5i_A 153 SKVPAIMRIIDPSDLTEKFEI-ETRGEVKDLHFSTD--GKVVAYITGS-SLEVISTVTGSCIARKT---DFDKNWSLSKI 225 (365)
T ss_dssp SCSSCEEEEEETTTTEEEEEE-ECSSCCCEEEECTT--SSEEEEECSS-CEEEEETTTCCEEEEEC---CCCTTEEEEEE
T ss_pred CCCCCEEEEeECCCCcEEEEe-CCCCceEEEEEccC--CceEEeccce-eEEEEEeccCcceeeee---cCCCCCCEEEE
Confidence 34678999998642 34 47788999999999 9999999855 56666666554332111 11125578999
Q ss_pred EEccCCCcccce---------eEEEE----------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCccc
Q psy13207 81 TWNHSFSRFNSI---------SIMYE----------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRF 141 (197)
Q Consensus 81 ~~~~~~~~~~~~---------~~~~~----------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~ 141 (197)
+|+|++..++++ ++.|+ ...+. +|...|++++|+|+.-+|++|+.|+.|+|||+++
T Consensus 226 ~fspdg~~l~~~s~d~~~~~~i~~~~~~~~~~~~~~~~~~~-~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~---- 300 (365)
T 4h5i_A 226 NFIADDTVLIAASLKKGKGIVLTKISIKSGNTSVLRSKQVT-NRFKGITSMDVDMKGELAVLASNDNSIALVKLKD---- 300 (365)
T ss_dssp EEEETTEEEEEEEESSSCCEEEEEEEEETTEEEEEEEEEEE-SSCSCEEEEEECTTSCEEEEEETTSCEEEEETTT----
T ss_pred EEcCCCCEEEEEecCCcceeEEeecccccceecceeeeeec-CCCCCeEeEEECCCCCceEEEcCCCEEEEEECCC----
Confidence 999999988654 46666 23455 7899999999996555559999999999999987
Q ss_pred ceeeeee-ecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 142 DIETIGN-FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 142 ~~~~~~~-~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
.+++.. +.+|...|++++|+|||++||+||.|++|+||+++.
T Consensus 301 -~~~~~~~~~gH~~~V~~v~fSpdg~~laS~S~D~tvrvw~ip~ 343 (365)
T 4h5i_A 301 -LSMSKIFKQAHSFAITEVTISPDSTYVASVSAANTIHIIKLPL 343 (365)
T ss_dssp -TEEEEEETTSSSSCEEEEEECTTSCEEEEEETTSEEEEEECCT
T ss_pred -CcEEEEecCcccCCEEEEEECCCCCEEEEEeCCCeEEEEEcCC
Confidence 667766 578999999999999999999999999999999964
No 19
>1got_B GT-beta; complex (GTP-binding/transducer), G protein, heterotrimer signal transduction; HET: GDP; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1b9y_A 1b9x_A* 2trc_B 1tbg_A 1gg2_B* 1omw_B 1gp2_B 1xhm_A 2qns_A 3ah8_B* 3cik_B 3kj5_A 3krw_B* 3krx_B* 3psc_B 3pvu_B* 3pvw_B* 1a0r_B* 2bcj_B* 3sn6_B*
Probab=99.96 E-value=4.1e-27 Score=174.76 Aligned_cols=174 Identities=15% Similarity=0.187 Sum_probs=143.3
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeee
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~ 79 (197)
+..|+++++|+.. ..+..|...|.+++|+|+ +++|++|+.|+.+++|++.+..... .....+. +...+.+
T Consensus 73 ~s~Dg~v~iWd~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~s~~~d~~v~iw~~~~~~~~~--~~~~~~~~h~~~v~~ 148 (340)
T 1got_B 73 ASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPS--GNYVACGGLDNICSIYNLKTREGNV--RVSRELAGHTGYLSC 148 (340)
T ss_dssp EETTTEEEEEETTTCCEEEEEECSSSCEEEEEECTT--SSEEEEEETTCEEEEEETTTCSBSC--EEEEEEECCSSCEEE
T ss_pred EeCCCcEEEEECCCCCcceEeecCCccEEEEEECCC--CCEEEEEeCCCeEEEEECccCCCcc--eeEEEecCCCccEEE
Confidence 4678999999853 457789999999999999 9999999999999999998654211 1122222 3678999
Q ss_pred EEEccCCCcccce----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeee
Q psy13207 80 LTWNHSFSRFNSI----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF 149 (197)
Q Consensus 80 ~~~~~~~~~~~~~----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 149 (197)
+.|++++..+.++ +++|| +..+. +|...|.+++|+++.-+|++|+.|+.|++||+++ ..+...+
T Consensus 149 ~~~~~~~~l~s~s~d~~i~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sg~~d~~v~~wd~~~-----~~~~~~~ 222 (340)
T 1got_B 149 CRFLDDNQIVTSSGDTTCALWDIETGQQTTTFT-GHTGDVMSLSLAPDTRLFVSGACDASAKLWDVRE-----GMCRQTF 222 (340)
T ss_dssp EEEEETTEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-----CSEEEEE
T ss_pred EEECCCCcEEEEECCCcEEEEECCCCcEEEEEc-CCCCceEEEEECCCCCEEEEEeCCCcEEEEECCC-----CeeEEEE
Confidence 9999988754333 89999 56677 8999999999995544459999999999999976 6677888
Q ss_pred cCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchh
Q psy13207 150 EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 150 ~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~ 189 (197)
.+|...|.+++|+|++++|++++.||+|++||+++.+...
T Consensus 223 ~~h~~~v~~v~~~p~~~~l~s~s~d~~v~iwd~~~~~~~~ 262 (340)
T 1got_B 223 TGHESDINAICFFPNGNAFATGSDDATCRLFDLRADQELM 262 (340)
T ss_dssp CCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEEE
T ss_pred cCCcCCEEEEEEcCCCCEEEEEcCCCcEEEEECCCCcEEE
Confidence 9999999999999999999999999999999998765443
No 20
>2pm7_B Protein transport protein SEC13, protein transport protein SEC31; beta propeller, alpha solenoid; 2.35A {Saccharomyces cerevisiae} PDB: 2pm9_B 2pm6_B 3iko_A 3mzk_A 3mzl_A
Probab=99.96 E-value=3.2e-27 Score=172.28 Aligned_cols=184 Identities=22% Similarity=0.307 Sum_probs=138.5
Q ss_pred cccccccceeeeee-------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee-ccCCCe
Q psy13207 6 LQSEKCLNQWTRRS-------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV-ACPTLA 77 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~-~~~~~~ 77 (197)
+..|+++++|++.. .+.+|...|.+++|+|+..+.+|++++.|++|++||+++...... ..+ .+...+
T Consensus 73 ~s~D~~v~iWd~~~~~~~~~~~~~~h~~~v~~v~~~p~~~g~~l~s~s~d~~v~~wd~~~~~~~~~----~~~~~h~~~v 148 (297)
T 2pm7_B 73 CSYDGKVMIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPMLLVASSDGKVSVVEFKENGTTSP----IIIDAHAIGV 148 (297)
T ss_dssp EETTTEEEEEEBSSSCBCCCEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEEBCSSSCBCC----EEEECCSSCE
T ss_pred EcCCCEEEEEEcCCCceEEEEEeecCCCceeEEEeCcCCCCcEEEEEECCCcEEEEEecCCCceee----eeeecccCcc
Confidence 46789999998752 367899999999999963367999999999999999987532211 112 236789
Q ss_pred eeEEEccC-------------CCcccce-----eEEEEe----------eEecccCCCceeEEEEcCCC---eEEEEeeC
Q psy13207 78 SCLTWNHS-------------FSRFNSI-----SIMYEA----------HSINAEHKDLIHDVAYDYYG---LRMATCSS 126 (197)
Q Consensus 78 ~~~~~~~~-------------~~~~~~~-----~~~~~~----------~~~~~~~~~~i~~~~~~~~~---~~~~s~~~ 126 (197)
.+++|+|+ ++.|+++ +++||+ ..+. +|...|.+++|+|+. -+|++++.
T Consensus 149 ~~~~~~p~~~~~~~~~~~~~~~~~l~sgs~D~~v~lwd~~~~~~~~~~~~~l~-~H~~~V~~v~~sp~~~~~~~las~s~ 227 (297)
T 2pm7_B 149 NSASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRSYMASVSQ 227 (297)
T ss_dssp EEEEECCCC------------CCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSEEEEEEET
T ss_pred ceEeecCCcccccccCCCCCCcceEEEEcCCCcEEEEEEcCCCceEEEEEEec-CCCCceEEEEECCCCCCceEEEEEEC
Confidence 99999997 3566655 899982 3456 899999999999652 44599999
Q ss_pred CCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 127 DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 127 d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
|+.|++||+++........+.....|...|++++|+|+|++|++++.||+|++|+....+.|..+.+.
T Consensus 228 D~~v~iWd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~las~~~D~~v~lw~~~~~g~w~~~~~~ 295 (297)
T 2pm7_B 228 DRTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEPAGEV 295 (297)
T ss_dssp TSCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEC---
T ss_pred CCcEEEEEeCCCCCccceeeeecccCCCcEEEEEECCCCCEEEEEcCCCcEEEEEECCCCcEEecccc
Confidence 99999999975211001111112567889999999999999999999999999999877777766544
No 21
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.96 E-value=4.3e-27 Score=173.40 Aligned_cols=186 Identities=23% Similarity=0.387 Sum_probs=145.1
Q ss_pred cccccccceeeee---------eeecCCCcceeEEEECC--CCCCcEEEEEeCCCcEEEEEcCCccccc---ceecccee
Q psy13207 6 LQSEKCLNQWTRR---------SNLVDSRTSVTDVKFGP--KQLGLVLATCAADGLVRIYEAPDVMNLS---QWCLQHEV 71 (197)
Q Consensus 6 ~~~~~~~~~w~~~---------~~~~~h~~~v~~~~~~~--~~~~~~l~s~~~dg~v~iw~~~~~~~~~---~~~~~~~~ 71 (197)
+..|+.+++|++. ..+.+|..+|.+++|+| + +++|++++.||.|++||+.++.... .+.....+
T Consensus 29 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~d--~~~l~s~~~dg~v~vwd~~~~~~~~~~~~~~~~~~~ 106 (351)
T 3f3f_A 29 CSSDQHIKVFKLDKDTSNWELSDSWRAHDSSIVAIDWASPEY--GRIIASASYDKTVKLWEEDPDQEECSGRRWNKLCTL 106 (351)
T ss_dssp EETTSEEEEEEECSSSCCEEEEEEEECCSSCEEEEEECCGGG--CSEEEEEETTSCEEEEEECTTSCTTSSCSEEEEEEE
T ss_pred eeCCCeEEEEECCCCCCcceecceeccCCCcEEEEEEcCCCC--CCEEEEEcCCCeEEEEecCCCcccccccCcceeeee
Confidence 3568899999765 24578999999999999 5 8899999999999999998764321 11222233
Q ss_pred c-cCCCeeeEEEccC--CCcccce-----eEEEEe---------------------------------------------
Q psy13207 72 A-CPTLASCLTWNHS--FSRFNSI-----SIMYEA--------------------------------------------- 98 (197)
Q Consensus 72 ~-~~~~~~~~~~~~~--~~~~~~~-----~~~~~~--------------------------------------------- 98 (197)
. +...+.+++|+|+ +.+++++ +++||+
T Consensus 107 ~~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~~~~~~l~ 186 (351)
T 3f3f_A 107 NDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVLSIPPANHLQSDFCLSWCPSRFSPEKLA 186 (351)
T ss_dssp CCCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESCSCCCSSCSCCCEEEEECCCSSSCCEEE
T ss_pred cccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhccccccccccccccccCCcccceeEEEeccCCCCCcEEE
Confidence 2 3678999999999 8877665 788881
Q ss_pred ---------------------eEecccCCCceeEEEEcCCC----eEEEEeeCCCeEEEEEccCCc--------------
Q psy13207 99 ---------------------HSINAEHKDLIHDVAYDYYG----LRMATCSSDQNIKVTRDVMGT-------------- 139 (197)
Q Consensus 99 ---------------------~~~~~~~~~~i~~~~~~~~~----~~~~s~~~d~~i~~~d~~~~~-------------- 139 (197)
..+. +|...|.+++|+++. -+|++++.|+.|++||++...
T Consensus 187 ~~~~~~~~~~~~~~~~~~~~~~~~~-~h~~~i~~~~~~p~~~~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~~~~~~~ 265 (351)
T 3f3f_A 187 VSALEQAIIYQRGKDGKLHVAAKLP-GHKSLIRSISWAPSIGRWYQLIATGCKDGRIRIFKITEKLSPLASEESLTNSNM 265 (351)
T ss_dssp EEETTEEEEEEECTTSCEEEEEECC-CCCSCEEEEEECCCSSCSSEEEEEEETTSCEEEEEEEECC--------------
T ss_pred EecCCCcEEEEccCCCceeeeeecC-CCCcceeEEEECCCCCCcceEEEEEcCCCeEEEEeCCCCcCccccCCcccceec
Confidence 1123 588899999999554 344999999999999997521
Q ss_pred ---------------------------ccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 140 ---------------------------RFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 140 ---------------------------~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
......+..+.+|...|++++|+|++++|++++.||.|++|++.+++.+..+.
T Consensus 266 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 345 (351)
T 3f3f_A 266 FDNSADVDMDAQGRSDSNTEEKAELQSNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLWKATYSNEFKCMS 345 (351)
T ss_dssp -------------------------CCSEEEEEEEEECTTSSCEEEEEECSSSCCEEEEETTSCEEEEEECTTSCEEEEE
T ss_pred cCCCcccccccccccccccceeeeecccccccEEEEEecccccEEEEEEcCCCCEEEEecCCCcEEEEecCcCcchhhee
Confidence 01235677788999999999999999999999999999999999988776665
Q ss_pred hh
Q psy13207 193 EE 194 (197)
Q Consensus 193 ~~ 194 (197)
..
T Consensus 346 ~~ 347 (351)
T 3f3f_A 346 VI 347 (351)
T ss_dssp EE
T ss_pred eh
Confidence 43
No 22
>2hes_X YDR267CP; beta-propeller, WD40 repeat, biosynthetic protein; 1.70A {Saccharomyces cerevisiae}
Probab=99.96 E-value=5.8e-27 Score=173.31 Aligned_cols=174 Identities=19% Similarity=0.332 Sum_probs=131.3
Q ss_pred cccccccceeeee------------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-
Q psy13207 6 LQSEKCLNQWTRR------------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA- 72 (197)
Q Consensus 6 ~~~~~~~~~w~~~------------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~- 72 (197)
+..|+++++|++. ..+.+|...|.+++|+|+ +++|++|+.|++|++||+...... +.....+.
T Consensus 76 ~s~D~~v~iw~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~sp~--g~~las~s~D~~v~iwd~~~~~~~--~~~~~~~~~ 151 (330)
T 2hes_X 76 GSFDSTVSIWAKEESADRTFEMDLLAIIEGHENEVKGVAWSND--GYYLATCSRDKSVWIWETDESGEE--YECISVLQE 151 (330)
T ss_dssp EETTSCEEEEEC-------CCCEEEEEEC----CEEEEEECTT--SCEEEEEETTSCEEEEECCTTCCC--CEEEEEECC
T ss_pred EeCCCcEEEEEcccCcCccccceeEEEEcCCCCcEEEEEECCC--CCEEEEEeCCCEEEEEeccCCCCC--eEEEEEecc
Confidence 4568999999762 347899999999999999 999999999999999999543211 11122233
Q ss_pred cCCCeeeEEEccCCCcccce-----eEEEE--------eeEecccCCCceeEEEEcCC--CeEEEEeeCCCeEEEEEccC
Q psy13207 73 CPTLASCLTWNHSFSRFNSI-----SIMYE--------AHSINAEHKDLIHDVAYDYY--GLRMATCSSDQNIKVTRDVM 137 (197)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~-----~~~~~--------~~~~~~~~~~~i~~~~~~~~--~~~~~s~~~d~~i~~~d~~~ 137 (197)
+...|.+++|+|++.+++++ +++|+ +..+. +|...|.+++|+++ ..+|++++.|+.|++||++.
T Consensus 152 h~~~v~~v~~~p~~~~l~s~s~D~~i~iW~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~l~s~s~D~~v~iw~~~~ 230 (330)
T 2hes_X 152 HSQDVKHVIWHPSEALLASSSYDDTVRIWKDYDDDWECVAVLN-GHEGTVWSSDFDKTEGVFRLCSGSDDSTVRVWKYMG 230 (330)
T ss_dssp CSSCEEEEEECSSSSEEEEEETTSCEEEEEEETTEEEEEEEEC-CCSSCEEEEEECCSSSSCEEEEEETTSCEEEEEEEE
T ss_pred CCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCCeeEEEEcc-CCCCcEEEEEecCCCCeeEEEEEeCCCeEEEEEecC
Confidence 36789999999999998776 79998 34566 89999999999955 44559999999999999864
Q ss_pred Ccc---cceeeeeeecC-ceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 138 GTR---FDIETIGNFED-HYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 138 ~~~---~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
... ........+.. |...|.+++|++++ +|++++.||+|++|+...+
T Consensus 231 ~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~~-~l~s~~~dg~v~iw~~~~~ 281 (330)
T 2hes_X 231 DDEDDQQEWVCEAILPDVHKRQVYNVAWGFNG-LIASVGADGVLAVYEEVDG 281 (330)
T ss_dssp ECTTSCEEEEEEEECCSCCSSCEEEEEECTTS-CEEEEETTSCEEEEEEETT
T ss_pred CCccccceeEEeeecccccccceEEEEEcCCC-EEEEEeCCCEEEEEEcCCC
Confidence 210 01134444554 88999999999765 7999999999999998764
No 23
>3fm0_A Protein CIAO1; WDR39,SGC,WD40,CIAO1, nucleus, WD repeat, biosynthetic prote structural genomics, structural genomics consortium; 1.70A {Homo sapiens}
Probab=99.96 E-value=5.8e-27 Score=174.32 Aligned_cols=164 Identities=19% Similarity=0.312 Sum_probs=133.8
Q ss_pred eeeeeecCCCc-ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce--
Q psy13207 16 TRRSNLVDSRT-SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-- 92 (197)
Q Consensus 16 ~~~~~~~~h~~-~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 92 (197)
.+..++.+|.. .|.+++|+|+ |++|++|+.|++|+|||+.+......... ...+...|.+++|+|++++|+++
T Consensus 6 ~~~~~~~~h~~~~v~~l~~sp~--g~~las~~~D~~i~iw~~~~~~~~~~~~~--~~~h~~~v~~~~~sp~g~~l~s~s~ 81 (345)
T 3fm0_A 6 VLLGRVPAHPDSRCWFLAWNPA--GTLLASCGGDRRIRIWGTEGDSWICKSVL--SEGHQRTVRKVAWSPCGNYLASASF 81 (345)
T ss_dssp EEEEEECCSTTSCEEEEEECTT--SSCEEEEETTSCEEEEEEETTEEEEEEEE--CSSCSSCEEEEEECTTSSEEEEEET
T ss_pred EEeeeecCCCCCcEEEEEECCC--CCEEEEEcCCCeEEEEEcCCCcceeeeee--ccccCCcEEEEEECCCCCEEEEEEC
Confidence 45567889988 9999999999 99999999999999999877642211110 11236789999999999998876
Q ss_pred ---eEEEE--------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEE
Q psy13207 93 ---SIMYE--------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSW 161 (197)
Q Consensus 93 ---~~~~~--------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~ 161 (197)
+++|+ +..+. +|...|.+++|+|+.-+|++|+.|+.|++||+++.. ....+..+.+|...|.+++|
T Consensus 82 D~~v~iw~~~~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~s~D~~v~iwd~~~~~--~~~~~~~~~~h~~~v~~~~~ 158 (345)
T 3fm0_A 82 DATTCIWKKNQDDFECVTTLE-GHENEVKSVAWAPSGNLLATCSRDKSVWVWEVDEED--EYECVSVLNSHTQDVKHVVW 158 (345)
T ss_dssp TSCEEEEEECCC-EEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEEECTTS--CEEEEEEECCCCSCEEEEEE
T ss_pred CCcEEEEEccCCCeEEEEEcc-CCCCCceEEEEeCCCCEEEEEECCCeEEEEECCCCC--CeEEEEEecCcCCCeEEEEE
Confidence 79998 34566 899999999999544444999999999999997531 13456778899999999999
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 162 NITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 162 ~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
+|++++|++++.|++|++||.+..+
T Consensus 159 ~p~~~~l~s~s~d~~i~~w~~~~~~ 183 (345)
T 3fm0_A 159 HPSQELLASASYDDTVKLYREEEDD 183 (345)
T ss_dssp CSSSSCEEEEETTSCEEEEEEETTE
T ss_pred CCCCCEEEEEeCCCcEEEEEecCCC
Confidence 9999999999999999999987653
No 24
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.96 E-value=5.1e-27 Score=175.24 Aligned_cols=165 Identities=15% Similarity=0.167 Sum_probs=137.5
Q ss_pred eeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---
Q psy13207 16 TRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--- 92 (197)
Q Consensus 16 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 92 (197)
....++.+|.++|++++|+|+ +.+|+||+.||+|++||..+.+....+.. +...+.+++|+|++..++++
T Consensus 55 ~~~~~l~gH~~~V~~~~~s~d--~~~l~s~s~Dg~v~vWd~~~~~~~~~~~~-----~~~~v~~~~~sp~g~~lasg~~d 127 (354)
T 2pbi_B 55 KTRRTLKGHGNKVLCMDWCKD--KRRIVSSSQDGKVIVWDSFTTNKEHAVTM-----PCTWVMACAYAPSGCAIACGGLD 127 (354)
T ss_dssp CEEEEEECCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTCCEEEEEEC-----SSSCCCEEEECTTSSEEEEESTT
T ss_pred EEEEEecCCCCeEEEEEECCC--CCEEEEEeCCCeEEEEECCCCCcceEEec-----CCCCEEEEEECCCCCEEEEeeCC
Confidence 345678999999999999999 99999999999999999887754433221 25678999999999998876
Q ss_pred --eEEEE------------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEE
Q psy13207 93 --SIMYE------------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWR 158 (197)
Q Consensus 93 --~~~~~------------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~ 158 (197)
+++|+ ...+. .|...|.+++|+++.-.|++++.|+.|++||+++ .+.+..+.+|...|.+
T Consensus 128 ~~i~v~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~t~s~D~~v~lwd~~~-----~~~~~~~~~h~~~v~~ 201 (354)
T 2pbi_B 128 NKCSVYPLTFDKNENMAAKKKSVA-MHTNYLSACSFTNSDMQILTASGDGTCALWDVES-----GQLLQSFHGHGADVLC 201 (354)
T ss_dssp SEEEEEECCCCTTCCSGGGCEEEE-ECSSCEEEEEECSSSSEEEEEETTSEEEEEETTT-----CCEEEEEECCSSCEEE
T ss_pred CCEEEEEEeccccccccccceeee-ccCCcEEEEEEeCCCCEEEEEeCCCcEEEEeCCC-----CeEEEEEcCCCCCeEE
Confidence 78897 23455 7999999999995443449999999999999987 6778889999999999
Q ss_pred EEEcc--CCCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 159 VSWNI--TGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 159 ~~~~p--~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
++|+| ++++|++|+.||+|++||+++++....+..
T Consensus 202 ~~~~~~~~g~~l~sgs~Dg~v~~wd~~~~~~~~~~~~ 238 (354)
T 2pbi_B 202 LDLAPSETGNTFVSGGCDKKAMVWDMRSGQCVQAFET 238 (354)
T ss_dssp EEECCCSSCCEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred EEEEeCCCCCEEEEEeCCCeEEEEECCCCcEEEEecC
Confidence 99988 578999999999999999998876655543
No 25
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.96 E-value=1.5e-27 Score=192.00 Aligned_cols=174 Identities=19% Similarity=0.268 Sum_probs=145.1
Q ss_pred cccccccceeeee----------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCC
Q psy13207 6 LQSEKCLNQWTRR----------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPT 75 (197)
Q Consensus 6 ~~~~~~~~~w~~~----------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~ 75 (197)
+..|+++++|++. ..+.+|...|.+++|+|+ +++|+||+.||+|++||+.++.....+. .+..
T Consensus 401 ~s~D~~i~~W~~~~~~~~~~~~~~~~~~h~~~v~~v~~s~~--g~~l~sgs~Dg~v~vwd~~~~~~~~~~~-----~h~~ 473 (694)
T 3dm0_A 401 ASRDKSIILWKLTKDDKAYGVAQRRLTGHSHFVEDVVLSSD--GQFALSGSWDGELRLWDLAAGVSTRRFV-----GHTK 473 (694)
T ss_dssp EETTSEEEEEECCCSTTCSCEEEEEEECCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTEEEEEEE-----CCSS
T ss_pred EeCCCcEEEEEccCCCcccccccceecCCCCcEEEEEECCC--CCEEEEEeCCCcEEEEECCCCcceeEEe-----CCCC
Confidence 5678999999864 357899999999999999 9999999999999999998876543222 2367
Q ss_pred CeeeEEEccCCCcccce-----eEEEEe-----eEec---ccCCCceeEEEEcCCC--eEEEEeeCCCeEEEEEccCCcc
Q psy13207 76 LASCLTWNHSFSRFNSI-----SIMYEA-----HSIN---AEHKDLIHDVAYDYYG--LRMATCSSDQNIKVTRDVMGTR 140 (197)
Q Consensus 76 ~~~~~~~~~~~~~~~~~-----~~~~~~-----~~~~---~~~~~~i~~~~~~~~~--~~~~s~~~d~~i~~~d~~~~~~ 140 (197)
.|.+++|+|+++.++++ +++|+. ..+. .+|...|.+++|+++. ..+++++.|+.|++||+++
T Consensus 474 ~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~s~d~~v~vwd~~~--- 550 (694)
T 3dm0_A 474 DVLSVAFSLDNRQIVSASRDRTIKLWNTLGECKYTISEGGEGHRDWVSCVRFSPNTLQPTIVSASWDKTVKVWNLSN--- 550 (694)
T ss_dssp CEEEEEECTTSSCEEEEETTSCEEEECTTSCEEEEECSSTTSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTT---
T ss_pred CEEEEEEeCCCCEEEEEeCCCEEEEEECCCCcceeeccCCCCCCCcEEEEEEeCCCCcceEEEEeCCCeEEEEECCC---
Confidence 89999999999998876 799991 1221 2688899999999442 2349999999999999976
Q ss_pred cceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 141 FDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 141 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
......+.+|...|.+++|+|++++|++++.||+|++||+++++....+
T Consensus 551 --~~~~~~~~~h~~~v~~v~~spdg~~l~sg~~Dg~i~iwd~~~~~~~~~~ 599 (694)
T 3dm0_A 551 --CKLRSTLAGHTGYVSTVAVSPDGSLCASGGKDGVVLLWDLAEGKKLYSL 599 (694)
T ss_dssp --CCEEEEECCCSSCEEEEEECTTSSEEEEEETTSBCEEEETTTTEEEECC
T ss_pred --CcEEEEEcCCCCCEEEEEEeCCCCEEEEEeCCCeEEEEECCCCceEEEe
Confidence 6677888999999999999999999999999999999999887655443
No 26
>2pbi_B Guanine nucleotide-binding protein subunit beta 5; helix WRAP, RGS domain, DEP domain, DHEX domain, GGL domain, propeller, signaling protein; 1.95A {Mus musculus}
Probab=99.96 E-value=5.8e-27 Score=174.95 Aligned_cols=175 Identities=18% Similarity=0.210 Sum_probs=143.3
Q ss_pred cccccccceeee-----eeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeee
Q psy13207 6 LQSEKCLNQWTR-----RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~-----~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~ 79 (197)
+..|+++++|+. ...+..|...|.+++|+|+ +..|++|+.|+.+++|++..............+. +...+.+
T Consensus 82 ~s~Dg~v~vWd~~~~~~~~~~~~~~~~v~~~~~sp~--g~~lasg~~d~~i~v~~~~~~~~~~~~~~~~~~~~h~~~v~~ 159 (354)
T 2pbi_B 82 SSQDGKVIVWDSFTTNKEHAVTMPCTWVMACAYAPS--GCAIACGGLDNKCSVYPLTFDKNENMAAKKKSVAMHTNYLSA 159 (354)
T ss_dssp EETTSEEEEEETTTCCEEEEEECSSSCCCEEEECTT--SSEEEEESTTSEEEEEECCCCTTCCSGGGCEEEEECSSCEEE
T ss_pred EeCCCeEEEEECCCCCcceEEecCCCCEEEEEECCC--CCEEEEeeCCCCEEEEEEeccccccccccceeeeccCCcEEE
Confidence 467899999974 3456778899999999999 9999999999999999987543221111122222 3678999
Q ss_pred EEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcC--CCeEEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 80 LTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDY--YGLRMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 80 ~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~--~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
+.|+|++..++++ +++|| +..+. +|...|.+++|++ +.-+|++|+.|+.|++||+++ ..++
T Consensus 160 ~~~~~~~~~l~t~s~D~~v~lwd~~~~~~~~~~~-~h~~~v~~~~~~~~~~g~~l~sgs~Dg~v~~wd~~~-----~~~~ 233 (354)
T 2pbi_B 160 CSFTNSDMQILTASGDGTCALWDVESGQLLQSFH-GHGADVLCLDLAPSETGNTFVSGGCDKKAMVWDMRS-----GQCV 233 (354)
T ss_dssp EEECSSSSEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECCCSSCCEEEEEETTSCEEEEETTT-----CCEE
T ss_pred EEEeCCCCEEEEEeCCCcEEEEeCCCCeEEEEEc-CCCCCeEEEEEEeCCCCCEEEEEeCCCeEEEEECCC-----CcEE
Confidence 9999999888765 89999 56777 8999999999973 222339999999999999987 6778
Q ss_pred eeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
..+.+|...|.+++|+|++++|++++.|++|++||++.....
T Consensus 234 ~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~v~lwd~~~~~~~ 275 (354)
T 2pbi_B 234 QAFETHESDVNSVRYYPSGDAFASGSDDATCRLYDLRADREV 275 (354)
T ss_dssp EEECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTTEEE
T ss_pred EEecCCCCCeEEEEEeCCCCEEEEEeCCCeEEEEECCCCcEE
Confidence 888999999999999999999999999999999999876543
No 27
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.96 E-value=2.5e-27 Score=188.33 Aligned_cols=171 Identities=16% Similarity=0.287 Sum_probs=140.7
Q ss_pred ccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEE
Q psy13207 9 EKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTW 82 (197)
Q Consensus 9 ~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~ 82 (197)
+..+++|++. ..+.+|...|++++|+|+ |++||+|+.|++|+|||+.+++... ...+. +...|.+++|
T Consensus 38 ~~~v~l~~~~~~~~~~~~~~h~~~v~~~~~spd--g~~lasg~~d~~v~lWd~~~~~~~~----~~~~~~~~~~v~~v~f 111 (611)
T 1nr0_A 38 GTSVYTVPVGSLTDTEIYTEHSHQTTVAKTSPS--GYYCASGDVHGNVRIWDTTQTTHIL----KTTIPVFSGPVKDISW 111 (611)
T ss_dssp TTEEEEEETTCSSCCEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEESSSTTCCE----EEEEECSSSCEEEEEE
T ss_pred CCEEEEecCCCcccCeEecCCCCceEEEEECCC--CcEEEEEeCCCCEEEeECCCCccee----eEeecccCCceEEEEE
Confidence 4578888764 358899999999999999 9999999999999999987543221 11222 2678999999
Q ss_pred ccCCCcccce---------eEEEE----eeEecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEccCCcccceeeeee
Q psy13207 83 NHSFSRFNSI---------SIMYE----AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMGTRFDIETIGN 148 (197)
Q Consensus 83 ~~~~~~~~~~---------~~~~~----~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 148 (197)
+|+++.++++ +++|+ +..+. +|...|++++|+|+. .+|++|+.|+.|++||.++ .++...
T Consensus 112 s~dg~~l~~~~~~~~~~~~v~~wd~~~~~~~l~-gh~~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~-----~~~~~~ 185 (611)
T 1nr0_A 112 DSESKRIAAVGEGRERFGHVFLFDTGTSNGNLT-GQARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPP-----FKFKST 185 (611)
T ss_dssp CTTSCEEEEEECCSSCSEEEEETTTCCBCBCCC-CCSSCEEEEEECSSSSCEEEEEETTSCEEEEETTT-----BEEEEE
T ss_pred CCCCCEEEEEECCCCceeEEEEeeCCCCcceec-CCCCCceEEEECCCCCeEEEEEeCCCeEEEEECCC-----CeEeee
Confidence 9999988643 56676 45666 899999999999543 2349999999999999875 677788
Q ss_pred ecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 149 FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 149 ~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
+.+|...|.+++|+|+|++|++++.|++|++||+.+++....+
T Consensus 186 l~~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~g~~~~~~ 228 (611)
T 1nr0_A 186 FGEHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVF 228 (611)
T ss_dssp ECCCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCEEEEC
T ss_pred eccccCceEEEEECCCCCEEEEEECCCcEEEEECCCCcEeeee
Confidence 9999999999999999999999999999999999877655444
No 28
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.96 E-value=3.7e-28 Score=185.86 Aligned_cols=176 Identities=14% Similarity=0.102 Sum_probs=137.1
Q ss_pred cccccccceeeeee-------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 6 LQSEKCLNQWTRRS-------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
+..|++|++|++.. .+.+|.++|++++|+|.+ +++|+||+.||+|++||+++.... .+. ..-.....+.
T Consensus 138 Gs~dg~i~lWd~~~~~~~~~~~~~gH~~~V~~l~f~p~~-~~~l~s~s~D~~v~iwd~~~~~~~-~~~--~~~~~~~~~~ 213 (435)
T 4e54_B 138 GSKGGDIMLWNFGIKDKPTFIKGIGAGGSITGLKFNPLN-TNQFYASSMEGTTRLQDFKGNILR-VFA--SSDTINIWFC 213 (435)
T ss_dssp EETTSCEEEECSSCCSCCEEECCCSSSCCCCEEEECSSC-TTEEEEECSSSCEEEEETTSCEEE-EEE--CCSSCSCCCC
T ss_pred EeCCCEEEEEECCCCCceeEEEccCCCCCEEEEEEeCCC-CCEEEEEeCCCEEEEeeccCCcee-EEe--ccCCCCccEE
Confidence 56889999998642 356899999999999842 789999999999999999764321 111 0001145678
Q ss_pred eEEEccCCCcccce-----eEEEE-----eeEecccCCCceeEEEEcCC-CeEEEEeeCCCeEEEEEccCCcccceeeee
Q psy13207 79 CLTWNHSFSRFNSI-----SIMYE-----AHSINAEHKDLIHDVAYDYY-GLRMATCSSDQNIKVTRDVMGTRFDIETIG 147 (197)
Q Consensus 79 ~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~i~~~~~~~~-~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 147 (197)
+++|+|++.+++++ +++|+ +..+. +|...|.+++|+++ ..+|++++.|+.|++||+++... ...+.
T Consensus 214 ~~~~~~~~~~l~~g~~dg~i~~wd~~~~~~~~~~-~h~~~v~~v~~~p~~~~~~~s~s~d~~v~iwd~~~~~~--~~~~~ 290 (435)
T 4e54_B 214 SLDVSASSRMVVTGDNVGNVILLNMDGKELWNLR-MHKKKVTHVALNPCCDWFLATASVDQTVKIWDLRQVRG--KASFL 290 (435)
T ss_dssp CEEEETTTTEEEEECSSSBEEEEESSSCBCCCSB-CCSSCEEEEEECTTCSSEEEEEETTSBCCEEETTTCCS--SSCCS
T ss_pred EEEECCCCCEEEEEeCCCcEeeeccCcceeEEEe-cccceEEeeeecCCCceEEEEecCcceeeEEecccccc--cceEE
Confidence 99999999998776 89999 55666 89999999999932 22338999999999999976321 12233
Q ss_pred eecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 148 NFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 148 ~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
...+|...|.+++|+|+|++|++++.||+|++||+++....
T Consensus 291 ~~~~h~~~v~~~~~spdg~~l~s~~~D~~i~iwd~~~~~~~ 331 (435)
T 4e54_B 291 YSLPHRHPVNAACFSPDGARLLTTDQKSEIRVYSASQWDCP 331 (435)
T ss_dssp BCCBCSSCEEECCBCTTSSEEEEEESSSCEEEEESSSSSSE
T ss_pred EeeeccccccceeECCCCCeeEEEcCCCEEEEEECCCCccc
Confidence 44678999999999999999999999999999999876543
No 29
>4g56_B MGC81050 protein; protein arginine methyltransferase, protein complexes, histo methylation, transferase; HET: SAH; 2.95A {Xenopus laevis}
Probab=99.95 E-value=3.3e-27 Score=176.44 Aligned_cols=172 Identities=11% Similarity=0.138 Sum_probs=134.6
Q ss_pred ccccccceeeeee---------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCe
Q psy13207 7 QSEKCLNQWTRRS---------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLA 77 (197)
Q Consensus 7 ~~~~~~~~w~~~~---------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 77 (197)
..++++++|++.. ...+|.+.|.+++|+|+ +++|++|+.|++|++||+.+++.+..+. .+...+
T Consensus 112 s~dg~v~lWd~~~~~~~~~~~~~~~~h~~~V~~v~~spd--g~~l~sgs~dg~v~iwd~~~~~~~~~~~-----~h~~~v 184 (357)
T 4g56_B 112 SDSGAVELWEILEKESLLVNKFAKYEHDDIVKTLSVFSD--GTQAVSGGKDFSVKVWDLSQKAVLKSYN-----AHSSEV 184 (357)
T ss_dssp ETTSCEEEC--------CCCCEEECCCSSCEEEEEECSS--SSEEEEEETTSCEEEEETTTTEEEEEEC-----CCSSCE
T ss_pred ECCCEEEEeeccccceeEEEeeccCCCCCCEEEEEECCC--CCEEEEEeCCCeEEEEECCCCcEEEEEc-----CCCCCE
Confidence 4578999998753 23479999999999999 9999999999999999999876543332 126789
Q ss_pred eeEEEccCCCc-ccce-----eEEEEe------eEec-ccCCCceeEEEEcCC-CeEEEEeeCCCeEEEEEccCCcccce
Q psy13207 78 SCLTWNHSFSR-FNSI-----SIMYEA------HSIN-AEHKDLIHDVAYDYY-GLRMATCSSDQNIKVTRDVMGTRFDI 143 (197)
Q Consensus 78 ~~~~~~~~~~~-~~~~-----~~~~~~------~~~~-~~~~~~i~~~~~~~~-~~~~~s~~~d~~i~~~d~~~~~~~~~ 143 (197)
.+++|++++.. ++++ +++||+ ..+. ..|...+.+++|+|+ ..+|++|+.|+.|++||+++ .
T Consensus 185 ~~v~~s~~~~~~~~s~~~dg~v~~wd~~~~~~~~~~~~~~~~~~v~~v~~sp~~~~~la~g~~d~~i~~wd~~~-----~ 259 (357)
T 4g56_B 185 NCVAACPGKDTIFLSCGEDGRILLWDTRKPKPATRIDFCASDTIPTSVTWHPEKDDTFACGDETGNVSLVNIKN-----P 259 (357)
T ss_dssp EEEEECTTCSSCEEEEETTSCEEECCTTSSSCBCBCCCTTCCSCEEEEEECTTSTTEEEEEESSSCEEEEESSC-----G
T ss_pred EEEEEccCCCceeeeeccCCceEEEECCCCceeeeeeeccccccccchhhhhcccceEEEeecccceeEEECCC-----C
Confidence 99999999864 4433 899992 1111 146678999999832 22338999999999999976 6
Q ss_pred eeeeeecCceecEEEEEEccCC-CEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 144 ETIGNFEDHYCTVWRVSWNITG-TIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 144 ~~~~~~~~h~~~v~~~~~~p~~-~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
+.+..+.+|...|++++|+|++ ++|++++.|++|++||+++++....
T Consensus 260 ~~~~~~~~~~~~v~~l~~sp~~~~~lasgs~D~~i~iwd~~~~~~~~~ 307 (357)
T 4g56_B 260 DSAQTSAVHSQNITGLAYSYHSSPFLASISEDCTVAVLDADFSEVFRD 307 (357)
T ss_dssp GGCEEECCCSSCEEEEEECSSSSCCEEEEETTSCEEEECTTSCEEEEE
T ss_pred cEeEEEeccceeEEEEEEcCCCCCEEEEEeCCCEEEEEECCCCcEeEE
Confidence 6778888999999999999987 6899999999999999988765443
No 30
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.95 E-value=1.7e-26 Score=174.61 Aligned_cols=180 Identities=14% Similarity=0.134 Sum_probs=142.1
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..|+.+++|++. ..+.+|...|.+++|+|+ +.+|++++.|++|++||+++++.... +.....+.++
T Consensus 141 ~~~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~p~--~~~l~s~s~d~~v~iwd~~~~~~~~~------~~~~~~v~~~ 212 (393)
T 1erj_A 141 GAEDRLIRIWDIENRKIVMILQGHEQDIYSLDYFPS--GDKLVSGSGDRTVRIWDLRTGQCSLT------LSIEDGVTTV 212 (393)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTEEEEE------EECSSCEEEE
T ss_pred EcCCCeEEEEECCCCcEEEEEccCCCCEEEEEEcCC--CCEEEEecCCCcEEEEECCCCeeEEE------EEcCCCcEEE
Confidence 4568899999854 468899999999999999 99999999999999999988754332 2235678999
Q ss_pred EEcc-CCCcccce-----eEEEE------eeEe-------cccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcc-
Q psy13207 81 TWNH-SFSRFNSI-----SIMYE------AHSI-------NAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTR- 140 (197)
Q Consensus 81 ~~~~-~~~~~~~~-----~~~~~------~~~~-------~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~- 140 (197)
+|+| ++.+++++ +++|| +..+ . +|...|.+++|+++.-+|++++.|+.|++||+++...
T Consensus 213 ~~~~~~~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~-~h~~~v~~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~ 291 (393)
T 1erj_A 213 AVSPGDGKYIAAGSLDRAVRVWDSETGFLVERLDSENESGT-GHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNK 291 (393)
T ss_dssp EECSTTCCEEEEEETTSCEEEEETTTCCEEEEEC------C-CCSSCEEEEEECTTSSEEEEEETTSEEEEEEC------
T ss_pred EEECCCCCEEEEEcCCCcEEEEECCCCcEEEeecccccCCC-CCCCCEEEEEECCCCCEEEEEeCCCEEEEEECCCCCCc
Confidence 9999 78888765 79999 2233 3 6889999999995444449999999999999975211
Q ss_pred ------cceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 141 ------FDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 141 ------~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
....+...+.+|...|.+++|+|++++|++|+.|+.|++||+++++....+..+
T Consensus 292 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~~~~~~~~~l~~h 351 (393)
T 1erj_A 292 SDSKTPNSGTCEVTYIGHKDFVLSVATTQNDEYILSGSKDRGVLFWDKKSGNPLLMLQGH 351 (393)
T ss_dssp ---------CEEEEEECCSSCEEEEEECGGGCEEEEEETTSEEEEEETTTCCEEEEEECC
T ss_pred ccccCCCCCcceEEEecccCcEEEEEECCCCCEEEEEeCCCeEEEEECCCCeEEEEECCC
Confidence 112345667889999999999999999999999999999999988766555433
No 31
>3frx_A Guanine nucleotide-binding protein subunit beta- like protein; RACK1, WD40, beta propeller, ribosome, translation, acetylation; 2.13A {Saccharomyces cerevisiae} PDB: 3izb_a 3o2z_T 3o30_T 3u5c_g 3u5g_g 3rfg_A 3rfh_A 1trj_A 3jyv_R*
Probab=99.95 E-value=2.2e-26 Score=169.43 Aligned_cols=168 Identities=16% Similarity=0.093 Sum_probs=135.6
Q ss_pred eeeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEEccCCCcccce
Q psy13207 14 QWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTWNHSFSRFNSI 92 (197)
Q Consensus 14 ~w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~ 92 (197)
...+..+|.+|.++|.+++|+|++ +++|+||+.|++|++|++........ .....+. +...|.+++|+|++++++++
T Consensus 6 ~~~l~~~l~gH~~~V~~l~~~~~~-~~~l~s~s~D~~v~~W~~~~~~~~~~-~~~~~~~~h~~~v~~~~~s~dg~~l~s~ 83 (319)
T 3frx_A 6 VLVLRGTLEGHNGWVTSLATSAGQ-PNLLLSASRDKTLISWKLTGDDQKFG-VPVRSFKGHSHIVQDCTLTADGAYALSA 83 (319)
T ss_dssp EEEEEEEECCCSSCEEEEEECSSC-TTEEEEEETTSEEEEEEEEEETTEEE-EEEEEEECCSSCEEEEEECTTSSEEEEE
T ss_pred EEEEEEEEccccceEEEEEccCCC-ccEEEEecCCccEEEecCCCCCcccc-ccceEEeCCcccEEEEEECCCCCEEEEE
Confidence 346677899999999999999962 58999999999999999865432111 1122333 36789999999999998776
Q ss_pred -----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEE
Q psy13207 93 -----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSW 161 (197)
Q Consensus 93 -----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~ 161 (197)
+++|| +..+. +|...|.+++|+++.-+|++|+.|+.|++||++ ...+..+.+|...|.+++|
T Consensus 84 s~D~~v~~wd~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~s~D~~i~vwd~~------~~~~~~~~~h~~~v~~~~~ 156 (319)
T 3frx_A 84 SWDKTLRLWDVATGETYQRFV-GHKSDVMSVDIDKKASMIISGSRDKTIKVWTIK------GQCLATLLGHNDWVSQVRV 156 (319)
T ss_dssp ETTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSCEEEEEETTSCEEEEETT------SCEEEEECCCSSCEEEEEE
T ss_pred eCCCEEEEEECCCCCeeEEEc-cCCCcEEEEEEcCCCCEEEEEeCCCeEEEEECC------CCeEEEEeccCCcEEEEEE
Confidence 89999 56677 899999999999544444999999999999986 4567788899999999999
Q ss_pred ccC------CCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 162 NIT------GTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 162 ~p~------~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
+|. +.++++++.|+.|++||+++.+....
T Consensus 157 ~~~~~~~~~~~~l~s~~~d~~i~~wd~~~~~~~~~ 191 (319)
T 3frx_A 157 VPNEKADDDSVTIISAGNDKMVKAWNLNQFQIEAD 191 (319)
T ss_dssp CCC------CCEEEEEETTSCEEEEETTTTEEEEE
T ss_pred ccCCCCCCCccEEEEEeCCCEEEEEECCcchhhee
Confidence 985 45899999999999999987654433
No 32
>4ery_A WD repeat-containing protein 5; WD40, WIN motif, beta propeller, 3-10 helix, lysine methyltransferase, RBBP5, ASH2L, core complex; 1.30A {Homo sapiens} PDB: 2h6k_A* 2h68_A* 2h6q_A* 3eg6_A 4erq_A 2h6n_A 4erz_A 4es0_A 4esg_A 4ewr_A 2gnq_A 2xl2_A 2xl3_A 3uvk_A* 3psl_A* 3uvl_A 3uvm_A 3uvn_A 3uvo_A 2h14_A ...
Probab=99.95 E-value=3.3e-26 Score=167.66 Aligned_cols=173 Identities=15% Similarity=0.267 Sum_probs=142.4
Q ss_pred cccccccceeee-----eeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTR-----RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~-----~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..|+.+++|+. ...+.+|...|.+++|+|+ +++|++++.|+.|++||+.+++.+..+. .+...+.++
T Consensus 41 ~~~dg~i~iw~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~i~vwd~~~~~~~~~~~-----~~~~~v~~~ 113 (312)
T 4ery_A 41 SSADKLIKIWGAYDGKFEKTISGHKLGISDVAWSSD--SNLLVSASDDKTLKIWDVSSGKCLKTLK-----GHSNYVFCC 113 (312)
T ss_dssp EETTSCEEEEETTTCCEEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTCCEEEEEE-----CCSSCEEEE
T ss_pred eeCCCeEEEEeCCCcccchhhccCCCceEEEEEcCC--CCEEEEECCCCEEEEEECCCCcEEEEEc-----CCCCCEEEE
Confidence 456889999975 3467899999999999998 9999999999999999998876543322 126789999
Q ss_pred EEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeee
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF 149 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 149 (197)
.|+|++.+++++ +++|| +..+. .|...|.+++|+++.-+|++++.|+.|++||+++ .+.+..+
T Consensus 114 ~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~i~~wd~~~-----~~~~~~~ 187 (312)
T 4ery_A 114 NFNPQSNLIVSGSFDESVRIWDVKTGKCLKTLP-AHSDPVSAVHFNRDGSLIVSSSYDGLCRIWDTAS-----GQCLKTL 187 (312)
T ss_dssp EECSSSSEEEEEETTSCEEEEETTTCCEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-----CCEEEEE
T ss_pred EEcCCCCEEEEEeCCCcEEEEECCCCEEEEEec-CCCCcEEEEEEcCCCCEEEEEeCCCcEEEEECCC-----CceeeEE
Confidence 999999998766 79999 55666 8999999999994443449999999999999976 4444443
Q ss_pred -cCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 150 -EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 150 -~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
..+...+..++|+|++++|++++.||.|++||+++++....+
T Consensus 188 ~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 230 (312)
T 4ery_A 188 IDDDNPPVSFVKFSPNGKYILAATLDNTLKLWDYSKGKCLKTY 230 (312)
T ss_dssp CCSSCCCEEEEEECTTSSEEEEEETTTEEEEEETTTTEEEEEE
T ss_pred eccCCCceEEEEECCCCCEEEEEcCCCeEEEEECCCCcEEEEE
Confidence 446678999999999999999999999999999887655444
No 33
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.95 E-value=7e-27 Score=175.96 Aligned_cols=166 Identities=13% Similarity=0.189 Sum_probs=124.1
Q ss_pred eeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccc---------------------------
Q psy13207 17 RRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQH--------------------------- 69 (197)
Q Consensus 17 ~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~--------------------------- 69 (197)
...+|.+|.++|++++|+|+ +.+|+||+.||+|++||+.+++....+....
T Consensus 58 ~~~~l~gH~~~V~~~~~sp~--~~~l~s~s~D~~v~iWd~~~~~~~~~~~~h~~~v~~~~~s~~g~~las~~~d~~v~iw 135 (380)
T 3iz6_a 58 CCRTLQGHSGKVYSLDWTPE--KNWIVSASQDGRLIVWNALTSQKTHAIKLHCPWVMECAFAPNGQSVACGGLDSACSIF 135 (380)
T ss_dssp EEEEECCCSSCEEEEEECTT--SSCEEEEETTSEEEEEETTTTEEEEEEECCCTTCCCCEECTTSSEEEECCSSSCCEEE
T ss_pred EeecccccccEEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCccceEEecCCCCEEEEEECCCCCEEEEeeCCCcEEEE
Confidence 44678999999999999998 9999999999999999998765443222100
Q ss_pred ----------------eec-cCCCeeeEEEccCCC-cccce-----eEEEE------eeEe----cccCCCceeEEEEc-
Q psy13207 70 ----------------EVA-CPTLASCLTWNHSFS-RFNSI-----SIMYE------AHSI----NAEHKDLIHDVAYD- 115 (197)
Q Consensus 70 ----------------~~~-~~~~~~~~~~~~~~~-~~~~~-----~~~~~------~~~~----~~~~~~~i~~~~~~- 115 (197)
.+. +...+.++.|.|++. .++++ +++|| +..+ ..+|...|.+++|+
T Consensus 136 ~~~~~~~~~~~~~~~~~~~gh~~~v~~~~~~~~~~~~l~s~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~ 215 (380)
T 3iz6_a 136 NLSSQADRDGNMPVSRVLTGHKGYASSCQYVPDQETRLITGSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINS 215 (380)
T ss_dssp ECCCCSSCCCSSTTCCBCCCCSSCCCCCBCCSSSSSCEEEECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECS
T ss_pred ECCCCccccCCccceeeccCCCcceEEEEEecCCCCEEEEECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeec
Confidence 000 123344555555433 23333 68887 2223 12688899999997
Q ss_pred --CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 116 --YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 116 --~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
++.+ ++|+.|+.|++||++.. ...+..+.+|...|.+++|+|++++|++++.||+|++||++++.....
T Consensus 216 ~~~~~l--~sgs~D~~v~~wd~~~~----~~~~~~~~~h~~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~ 286 (380)
T 3iz6_a 216 LNANMF--ISGSCDTTVRLWDLRIT----SRAVRTYHGHEGDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQV 286 (380)
T ss_dssp SSCCEE--EEEETTSCEEEEETTTT----CCCCEEECCCSSCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEE
T ss_pred CCCCEE--EEEECCCeEEEEECCCC----CcceEEECCcCCCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEE
Confidence 3455 99999999999998742 456778889999999999999999999999999999999998765443
No 34
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.95 E-value=7.1e-27 Score=171.89 Aligned_cols=183 Identities=22% Similarity=0.334 Sum_probs=136.5
Q ss_pred cccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCe
Q psy13207 6 LQSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLA 77 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~ 77 (197)
+..|+++++|++. ..+.+|...|.+++|+|+..+.+|++|+.|++|++||++..... .....+. +...+
T Consensus 77 ~s~D~~v~iWd~~~~~~~~~~~~~~h~~~V~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~---~~~~~~~~h~~~v 153 (316)
T 3bg1_A 77 CSYDRKVIIWREENGTWEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQW---EVKKINNAHTIGC 153 (316)
T ss_dssp EETTSCEEEECCSSSCCCEEEEECCCSSCCCEEEECCTTTCSCEEEECSSSCEEEEEECSSSCE---EECCBTTSSSSCB
T ss_pred EECCCEEEEEECCCCcceEEEEccCCCCceEEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCc---ceeeeeccccCCc
Confidence 4578999999864 24678999999999999644679999999999999999865321 1111111 25678
Q ss_pred eeEEEccCC-----------------Ccccce-----eEEEEe---------eEecccCCCceeEEEEcCCC----eEEE
Q psy13207 78 SCLTWNHSF-----------------SRFNSI-----SIMYEA---------HSINAEHKDLIHDVAYDYYG----LRMA 122 (197)
Q Consensus 78 ~~~~~~~~~-----------------~~~~~~-----~~~~~~---------~~~~~~~~~~i~~~~~~~~~----~~~~ 122 (197)
.+++|+|+. .+++++ +++|++ ..+. +|...|++++|+|+. -+|+
T Consensus 154 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sgs~D~~v~lWd~~~~~~~~~~~~l~-~h~~~V~~v~~sp~~~~~~~~la 232 (316)
T 3bg1_A 154 NAVSWAPAVVPGSLIDHPSGQKPNYIKRFASGGCDNLIKLWKEEEDGQWKEEQKLE-AHSDWVRDVAWAPSIGLPTSTIA 232 (316)
T ss_dssp CCCEECCCCCC------CCSCCCCCCCBEECCBTTSBCCEEEECTTSCEEEEECCB-CCSSCEEEEECCCCSSCSCCEEE
T ss_pred ceEEEccccCCccccccccccCccccceEEEecCCCeEEEEEeCCCCccceeeecc-cCCCceEEEEecCCCCCCCceEE
Confidence 899999973 456554 799983 2345 799999999999543 3349
Q ss_pred EeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 123 TCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 123 s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
+++.|+.|++|++++.... ......+..|...|++++|+|++++|++++.|++|++|+....+.|..+..
T Consensus 233 s~s~D~~v~iw~~~~~~~~-~~~~~~~~~~~~~v~~v~~sp~g~~las~~~D~~v~lw~~~~~g~~~~~~~ 302 (316)
T 3bg1_A 233 SCSQDGRVFIWTCDDASSN-TWSPKLLHKFNDVVWHVSWSITANILAVSGGDNKVTLWKESVDGQWVCISD 302 (316)
T ss_dssp EEETTCEEEEEECSSTTCC-CCBCCEEEECSSCEEEEEECTTTCCEEEEESSSCEEEEEECTTSCEEEEEE
T ss_pred EEcCCCeEEEEEccCcccc-chhhhhhhcCCCcEEEEEEcCCCCEEEEEcCCCeEEEEEECCCCcEEEeee
Confidence 9999999999998652100 111223456788999999999999999999999999999986666655443
No 35
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.95 E-value=5e-27 Score=175.98 Aligned_cols=175 Identities=14% Similarity=0.168 Sum_probs=134.8
Q ss_pred cccccccceeeeee-------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee-ccCCCe
Q psy13207 6 LQSEKCLNQWTRRS-------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV-ACPTLA 77 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~-~~~~~~ 77 (197)
+..++.+++|++.. .+.+|..+|.+++|+|+ +++|++++.|++|++||+.+++... ....+ .+...+
T Consensus 29 ~~~d~~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~s~~--~~~l~s~s~d~~v~vwd~~~~~~~~---~~~~~~~~~~~v 103 (377)
T 3dwl_C 29 TTATNQVELYEQDGNGWKHARTFSDHDKIVTCVDWAPK--SNRIVTCSQDRNAYVYEKRPDGTWK---QTLVLLRLNRAA 103 (377)
T ss_dssp CCSSSCBCEEEEETTEEEECCCBCCCSSCEEEEEECTT--TCCEEEEETTSSEEEC------CCC---CEEECCCCSSCE
T ss_pred ecCCCEEEEEEccCCceEEEEEEecCCceEEEEEEeCC--CCEEEEEeCCCeEEEEEcCCCCcee---eeeEecccCCce
Confidence 34688999998763 36789999999999999 9999999999999999998765111 11111 236789
Q ss_pred eeEEEccCCCcccce-----eEEEE---------eeEeccc-CCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcc--
Q psy13207 78 SCLTWNHSFSRFNSI-----SIMYE---------AHSINAE-HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTR-- 140 (197)
Q Consensus 78 ~~~~~~~~~~~~~~~-----~~~~~---------~~~~~~~-~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~-- 140 (197)
.+++|+|+++.++++ +++|+ ...+. . |...|.+++|+++.-+|++++.|+.|++||++....
T Consensus 104 ~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~-~~h~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~ 182 (377)
T 3dwl_C 104 TFVRWSPNEDKFAVGSGARVISVCYFEQENDWWVSKHLK-RPLRSTILSLDWHPNNVLLAAGCADRKAYVLSAYVRDVDA 182 (377)
T ss_dssp EEEECCTTSSCCEEEESSSCEEECCC-----CCCCEEEC-SSCCSCEEEEEECTTSSEEEEEESSSCEEEEEECCSSCC-
T ss_pred EEEEECCCCCEEEEEecCCeEEEEEECCcccceeeeEee-cccCCCeEEEEEcCCCCEEEEEeCCCEEEEEEEEecccCC
Confidence 999999999998776 78998 23455 4 999999999995544449999999999999853110
Q ss_pred -----------cceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 141 -----------FDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 141 -----------~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
....++..+ +|...|.+++|+|++++|++++.||.|++||+++++.
T Consensus 183 ~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~sp~~~~l~~~~~d~~i~iwd~~~~~~ 239 (377)
T 3dwl_C 183 KPEASVWGSRLPFNTVCAEY-PSGGWVHAVGFSPSGNALAYAGHDSSVTIAYPSAPEQ 239 (377)
T ss_dssp CCCSCSSCSCCCEEEEEECC-CCSSSEEEEEECTTSSCEEEEETTTEEC-CEECSTTS
T ss_pred Cccccccccccchhhhhhcc-cCCceEEEEEECCCCCEEEEEeCCCcEEEEECCCCCC
Confidence 014456666 8999999999999999999999999999999998776
No 36
>3bg1_A Protein SEC13 homolog; NPC, transport, WD repeat, autocatalytic cleavage, mRNA transport, nuclear pore complex, nucleus, phosphoprotein; 3.00A {Homo sapiens} PDB: 3bg0_A
Probab=99.95 E-value=7.2e-27 Score=171.85 Aligned_cols=172 Identities=20% Similarity=0.234 Sum_probs=135.0
Q ss_pred cccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCe
Q psy13207 6 LQSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLA 77 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~ 77 (197)
+..|+++++|++. ..+.+|.++|.+++|+|...+++|+||+.|++|++||+++++... ...+. +...|
T Consensus 31 gs~D~~v~lwd~~~~~~~~~~~l~gH~~~V~~v~~~~~~~~~~l~s~s~D~~v~iWd~~~~~~~~----~~~~~~h~~~V 106 (316)
T 3bg1_A 31 CSSDRSVKIFDVRNGGQILIADLRGHEGPVWQVAWAHPMYGNILASCSYDRKVIIWREENGTWEK----SHEHAGHDSSV 106 (316)
T ss_dssp EETTTEEEEEEEETTEEEEEEEEECCSSCEEEEEECCGGGSSCEEEEETTSCEEEECCSSSCCCE----EEEECCCSSCC
T ss_pred EeCCCeEEEEEecCCCcEEEEEEcCCCccEEEEEeCCCCCCCEEEEEECCCEEEEEECCCCcceE----EEEccCCCCce
Confidence 4678999999864 357899999999999862127899999999999999998753211 11222 36789
Q ss_pred eeEEEccC--CCcccce-----eEEEEee---------EecccCCCceeEEEEcCCC-----------------eEEEEe
Q psy13207 78 SCLTWNHS--FSRFNSI-----SIMYEAH---------SINAEHKDLIHDVAYDYYG-----------------LRMATC 124 (197)
Q Consensus 78 ~~~~~~~~--~~~~~~~-----~~~~~~~---------~~~~~~~~~i~~~~~~~~~-----------------~~~~s~ 124 (197)
.+++|+|+ +.+++++ +++|++. .+. +|...+.+++|+++. -+|++|
T Consensus 107 ~~v~~~p~~~g~~lasgs~D~~i~lwd~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~sg 185 (316)
T 3bg1_A 107 NSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINN-AHTIGCNAVSWAPAVVPGSLIDHPSGQKPNYIKRFASG 185 (316)
T ss_dssp CEEEECCTTTCSCEEEECSSSCEEEEEECSSSCEEECCBTT-SSSSCBCCCEECCCCCC------CCSCCCCCCCBEECC
T ss_pred EEEEECCCCCCcEEEEEcCCCCEEEEecCCCCCcceeeeec-cccCCcceEEEccccCCccccccccccCccccceEEEe
Confidence 99999998 6677665 7999832 223 788899999998541 234999
Q ss_pred eCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCC----CEEEEEeCCCcEEEEEcCC
Q psy13207 125 SSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITG----TIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 125 ~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~----~~l~~~~~dg~i~iw~~~~ 184 (197)
+.|+.|++||.+... ...++..+.+|...|.+++|+|++ ++|++++.|++|++|+++.
T Consensus 186 s~D~~v~lWd~~~~~--~~~~~~~l~~h~~~V~~v~~sp~~~~~~~~las~s~D~~v~iw~~~~ 247 (316)
T 3bg1_A 186 GCDNLIKLWKEEEDG--QWKEEQKLEAHSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDD 247 (316)
T ss_dssp BTTSBCCEEEECTTS--CEEEEECCBCCSSCEEEEECCCCSSCSCCEEEEEETTCEEEEEECSS
T ss_pred cCCCeEEEEEeCCCC--ccceeeecccCCCceEEEEecCCCCCCCceEEEEcCCCeEEEEEccC
Confidence 999999999996421 124667788999999999999986 8999999999999999876
No 37
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.95 E-value=3.1e-26 Score=180.32 Aligned_cols=160 Identities=21% Similarity=0.402 Sum_probs=135.4
Q ss_pred ccccccceeeee----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEE
Q psy13207 7 QSEKCLNQWTRR----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTW 82 (197)
Q Consensus 7 ~~~~~~~~w~~~----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (197)
..++.+++|+.. ..+.+|...|.+++|+|+ +++|++++.|++|++||.... .+..+ ..+...+.+++|
T Consensus 404 ~~d~~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d--~~~l~~~~~d~~v~~w~~~~~-~~~~~-----~~~~~~v~~~~~ 475 (577)
T 2ymu_A 404 SDDKTVKLWNRNGQLLQTLTGHSSSVWGVAFSPD--DQTIASASDDKTVKLWNRNGQ-LLQTL-----TGHSSSVRGVAF 475 (577)
T ss_dssp ETTSEEEEECTTCCEEEEEECCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTSC-EEEEE-----ECCSSCEEEEEE
T ss_pred eCCCEEEEEeCCCCEEEEecCCCCCeEEEEECCC--CCEEEEEcCCCEEEEEECCCC-EEEEE-----cCCCCCEEEEEE
Confidence 467889999743 457899999999999999 999999999999999996532 22111 123678999999
Q ss_pred ccCCCcccce-----eEEEE-----eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCc
Q psy13207 83 NHSFSRFNSI-----SIMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDH 152 (197)
Q Consensus 83 ~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h 152 (197)
+|++++++++ +++|+ +..+. +|...|++++|+|+.-+|++++.|+.|++||.. .+++..+.+|
T Consensus 476 spd~~~las~~~d~~i~iw~~~~~~~~~~~-~h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~~------~~~~~~~~~h 548 (577)
T 2ymu_A 476 SPDGQTIASASDDKTVKLWNRNGQLLQTLT-GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN------GQLLQTLTGH 548 (577)
T ss_dssp CTTSCEEEEEETTSEEEEEETTSCEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSEEEEECTT------SCEEEEEECC
T ss_pred cCCCCEEEEEeCCCEEEEEcCCCCEEEEEe-CCCCCEEEEEEcCCCCEEEEEECcCEEEEEeCC------CCEEEEEcCC
Confidence 9999999875 89999 67777 899999999999444334999999999999964 5678889999
Q ss_pred eecEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy13207 153 YCTVWRVSWNITGTIVASSGDDGCVRLWK 181 (197)
Q Consensus 153 ~~~v~~~~~~p~~~~l~~~~~dg~i~iw~ 181 (197)
...|++++|+|||++|++++.|++|++||
T Consensus 549 ~~~v~~~~fs~dg~~l~s~~~D~~i~~Wd 577 (577)
T 2ymu_A 549 SSSVWGVAFSPDGQTIASASSDKTVKLWN 577 (577)
T ss_dssp SSCEEEEEECTTSSCEEEEETTSCEEEEC
T ss_pred CCCEEEEEEcCCCCEEEEEeCCCEEEEeC
Confidence 99999999999999999999999999997
No 38
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.95 E-value=2.2e-26 Score=168.38 Aligned_cols=167 Identities=11% Similarity=0.049 Sum_probs=125.4
Q ss_pred cccccceeeee------eeecCCCcceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 8 SEKCLNQWTRR------SNLVDSRTSVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 8 ~~~~~~~w~~~------~~~~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
.++.++.|.+. ..+.+|...+..++|+| ++++.+|++++.|++|+|||+.+++.+..+.-... ....+.++
T Consensus 155 ~d~~V~~~~~s~dG~~~~s~~~~~~~v~~l~fs~~~g~~~~LaSgS~D~TIkIWDl~TGk~l~tL~g~~~--~v~~v~~v 232 (356)
T 2w18_A 155 SDQQVEVMTFAEDGGGKENQFLMPPEETILTFAEVQGMQEALLGTTIMNNIVIWNLKTGQLLKKMHIDDS--YQASVCHK 232 (356)
T ss_dssp TTCEEEEEEECTTSCEEEEEEECCCSSCEEEEEEEETSTTEEEEEETTSEEEEEETTTCCEEEEEECCC-----CCCEEE
T ss_pred CCCcEEEEEECCCCceeeeeccCCCceeeEEeeccCCCCceEEEecCCCcEEEEECCCCcEEEEEcCCCc--ceeeeEEE
Confidence 57888899872 34568999999999998 22279999999999999999999987665532111 12367788
Q ss_pred EEccCCCccc------------ce-----eEEEE------eeEe----cccCCCceeEEEEcCCCeEEEEeeCCCeEEEE
Q psy13207 81 TWNHSFSRFN------------SI-----SIMYE------AHSI----NAEHKDLIHDVAYDYYGLRMATCSSDQNIKVT 133 (197)
Q Consensus 81 ~~~~~~~~~~------------~~-----~~~~~------~~~~----~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~ 133 (197)
+|+|++.+++ ++ +++|+ +..+ +.+|...+.+..+++..+ ++++.|++|++|
T Consensus 233 afSpdG~~lvs~s~~~~~w~laSGs~D~tIklWd~~tgk~l~v~~~~~p~Gh~~~~lsg~~sg~~l--ASgS~DgTIkIW 310 (356)
T 2w18_A 233 AYSEMGLLFIVLSHPCAKESESLRSPVFQLIVINPKTTLSVGVMLYCLPPGQAGRFLEGDVKDHCA--AAILTSGTIAIW 310 (356)
T ss_dssp EEEETTEEEEEEC------------CCEEEEEEETTTTEEEEEEEECCCTTCCCCEEEEEEETTEE--EEEETTSCEEEE
T ss_pred EECCCCCEEEEeccCCCcceeeccCCCcEEEEEECCCCEEEEEEEeeccCCCcceeEccccCCCEE--EEEcCCCcEEEE
Confidence 9999998763 22 68888 2222 225655555555555666 999999999999
Q ss_pred EccCCcccceeeeeeecCceecEE-EEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 134 RDVMGTRFDIETIGNFEDHYCTVW-RVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 134 d~~~~~~~~~~~~~~~~~h~~~v~-~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
|+.+ ++++..+.+|...+. .++|+|||++|++|+.|++|+|||+.
T Consensus 311 Dl~t-----Gk~l~tL~gH~~~vvs~vafSPDG~~LaSGS~D~TIklWd~~ 356 (356)
T 2w18_A 311 DLLL-----GQCTALLPPVSDQHWSFVKWSGTDSHLLAGQKDGNIFVYHYS 356 (356)
T ss_dssp ETTT-----CSEEEEECCC--CCCCEEEECSSSSEEEEECTTSCEEEEEEC
T ss_pred ECCC-----CcEEEEecCCCCCeEEEEEECCCCCEEEEEECCCcEEEecCC
Confidence 9987 788889999987655 58999999999999999999999963
No 39
>3iz6_a 40S ribosomal protein RACK1 (RACK1); eukaryotic ribosome,homology modeling,de novo modeling,ribos proteins,novel ribosomal proteins, ribosome; 5.50A {Triticum aestivum}
Probab=99.95 E-value=4.2e-26 Score=171.71 Aligned_cols=170 Identities=12% Similarity=0.193 Sum_probs=132.8
Q ss_pred cccccccceeeeee-----ee-----cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cC
Q psy13207 6 LQSEKCLNQWTRRS-----NL-----VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CP 74 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-----~~-----~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~ 74 (197)
+..|+++++|++.. .+ .+|...|.++.|+|.+ +++|++|+.|++|++||++..... ...+. +.
T Consensus 176 ~s~D~~i~~wd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~sgs~D~~v~~wd~~~~~~~-----~~~~~~h~ 249 (380)
T 3iz6_a 176 GSGDQTCVLWDVTTGQRISIFGSEFPSGHTADVLSLSINSLN-ANMFISGSCDTTVRLWDLRITSRA-----VRTYHGHE 249 (380)
T ss_dssp ECTTSCEEEECTTTCCEEEEECCCSSSSCCSCEEEEEECSSS-CCEEEEEETTSCEEEEETTTTCCC-----CEEECCCS
T ss_pred ECCCCcEEEEEcCCCcEEEEeecccCCCCccCeEEEEeecCC-CCEEEEEECCCeEEEEECCCCCcc-----eEEECCcC
Confidence 35789999998642 23 6799999999998731 889999999999999999743221 12222 36
Q ss_pred CCeeeEEEccCCCcccce-----eEEEE------eeEecccC-------CCceeEEEEcCCCeEEEEeeCCCeEEEEEcc
Q psy13207 75 TLASCLTWNHSFSRFNSI-----SIMYE------AHSINAEH-------KDLIHDVAYDYYGLRMATCSSDQNIKVTRDV 136 (197)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~-------~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~ 136 (197)
..|.+++|+|++.+++++ +++|| +..+. .+ ...+.+++|+++.-+|++|+.||.|++||..
T Consensus 250 ~~v~~v~~~p~~~~l~s~s~D~~i~lwd~~~~~~~~~~~-~~~~~~~~~~~~v~~~~~s~~g~~l~~g~~dg~i~vwd~~ 328 (380)
T 3iz6_a 250 GDINSVKFFPDGQRFGTGSDDGTCRLFDMRTGHQLQVYN-REPDRNDNELPIVTSVAFSISGRLLFAGYSNGDCYVWDTL 328 (380)
T ss_dssp SCCCEEEECTTSSEEEEECSSSCEEEEETTTTEEEEEEC-CCCSSSCCSSCSCSEEEECSSSSEEEEECTTSCEEEEETT
T ss_pred CCeEEEEEecCCCeEEEEcCCCeEEEEECCCCcEEEEec-ccccccccccCceEEEEECCCCCEEEEEECCCCEEEEECC
Confidence 789999999999998876 89999 33333 22 2348999999444444999999999999987
Q ss_pred CCcccceeeeeee----cCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 137 MGTRFDIETIGNF----EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 137 ~~~~~~~~~~~~~----~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
. .+.+..+ .+|...|.+++|+|+|++|++|+.|++|++|++...++
T Consensus 329 ~-----~~~~~~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~D~~i~iW~~~~~~~ 378 (380)
T 3iz6_a 329 L-----AEMVLNLGTLQNSHEGRISCLGLSSDGSALCTGSWDKNLKIWAFSGHRK 378 (380)
T ss_dssp T-----CCEEEEECCSCSSCCCCCCEEEECSSSSEEEEECTTSCEEEEECCSSSS
T ss_pred C-----CceEEEEecccCCCCCceEEEEECCCCCEEEEeeCCCCEEEEecCCCcc
Confidence 5 4444444 67999999999999999999999999999999986543
No 40
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.95 E-value=5.4e-26 Score=166.28 Aligned_cols=170 Identities=14% Similarity=0.237 Sum_probs=125.7
Q ss_pred cccccceeeee-----ee--ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecc------------
Q psy13207 8 SEKCLNQWTRR-----SN--LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQ------------ 68 (197)
Q Consensus 8 ~~~~~~~w~~~-----~~--~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~------------ 68 (197)
.|+++++|+.. .. +.+|...|.+++|+|+ +++|++|+.||+|++|++.+++.+..+...
T Consensus 43 ~D~tV~iWd~~tg~~~~~~~~~~~~~~V~~v~~~~~--~~~l~sgs~Dg~v~iw~~~~~~~~~~~~~h~~~~~~~~~~~~ 120 (318)
T 4ggc_A 43 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKE--GNYLAVGTSSAEVQLWDVQQQKRLRNMTSHSARVGSLSWNSY 120 (318)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTT--SSEEEEEETTSEEEEEETTTTEEEEEEECCSSCEEEEEEETT
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCeEEEEEECCC--CCEEEEEECCCcEEEeecCCceeEEEecCccceEEEeecCCC
Confidence 47899999854 22 4578889999999999 999999999999999999887644332110
Q ss_pred -----------------------ceec-cCCCeeeEEEccCCCcccce-----eEEEEe---------------------
Q psy13207 69 -----------------------HEVA-CPTLASCLTWNHSFSRFNSI-----SIMYEA--------------------- 98 (197)
Q Consensus 69 -----------------------~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~--------------------- 98 (197)
..+. +...+..+.+.+++.+++++ +++||+
T Consensus 121 ~l~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~v~ 200 (318)
T 4ggc_A 121 ILSSGSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGGWVPLQTFTQHQGAVK 200 (318)
T ss_dssp EEEEEETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCBTTBSCCSEEECCCCSCEE
T ss_pred EEEEEecCCceEeeecCCCceeEEEEcCccCceEEEEEcCCCCEEEEEecCcceeEEECCCCcccccceeeecccCCceE
Confidence 0011 14556777888888777654 677760
Q ss_pred ---------------------------------eEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccce
Q psy13207 99 ---------------------------------HSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDI 143 (197)
Q Consensus 99 ---------------------------------~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~ 143 (197)
.... .+...+..+.|+ +..+.+++++.|+.|++||+++ .
T Consensus 201 ~~~~~~~~~~~~~~~~~~~~~~i~lwd~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~sg~~d~~i~iwd~~~-----~ 274 (318)
T 4ggc_A 201 AVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV-DAHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT-----M 274 (318)
T ss_dssp EEEECTTSTTEEEEEECTTTCEEEEEETTTCCEEEEE-ECSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT-----C
T ss_pred EEEecCCCCcEEEEEecCCCCEEEEEecccccccccc-cceeeeeeeeecccccceEEEEEcCCCEEEEEECCC-----C
Confidence 0011 233445566666 3444334455789999999976 6
Q ss_pred eeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 144 ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 144 ~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
+++..+.+|...|++++|+|+|++|++|+.||+|++||+...
T Consensus 275 ~~~~~l~gH~~~V~~l~~spdg~~l~S~s~D~~v~iWd~~~~ 316 (318)
T 4ggc_A 275 AKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFEL 316 (318)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCC
T ss_pred cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCC
Confidence 788899999999999999999999999999999999999764
No 41
>1nr0_A Actin interacting protein 1; beta propeller, WD40 repeat, ADF, cofilin, structural genomics, PSI, protein structure initiative; 1.70A {Caenorhabditis elegans} SCOP: b.69.4.1 b.69.4.1 PDB: 1pev_A
Probab=99.94 E-value=8.6e-26 Score=179.54 Aligned_cols=170 Identities=19% Similarity=0.330 Sum_probs=136.7
Q ss_pred cccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCC----CcEEEEEcCCcccccceeccceeccC
Q psy13207 6 LQSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAAD----GLVRIYEAPDVMNLSQWCLQHEVACP 74 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d----g~v~iw~~~~~~~~~~~~~~~~~~~~ 74 (197)
+..|+++++|++. ..+.+|.++|.+++|+|+ ++.|++++.+ ++|++||... ....+. .+.
T Consensus 77 g~~d~~v~lWd~~~~~~~~~~~~~~~~~~v~~v~fs~d--g~~l~~~~~~~~~~~~v~~wd~~~--~~~~l~-----gh~ 147 (611)
T 1nr0_A 77 GDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSE--SKRIAAVGEGRERFGHVFLFDTGT--SNGNLT-----GQA 147 (611)
T ss_dssp EETTSEEEEEESSSTTCCEEEEEECSSSCEEEEEECTT--SCEEEEEECCSSCSEEEEETTTCC--BCBCCC-----CCS
T ss_pred EeCCCCEEEeECCCCcceeeEeecccCCceEEEEECCC--CCEEEEEECCCCceeEEEEeeCCC--Ccceec-----CCC
Confidence 4578999999863 357789999999999999 9999988865 4788888432 222111 136
Q ss_pred CCeeeEEEccCCCc-ccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccc
Q psy13207 75 TLASCLTWNHSFSR-FNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFD 142 (197)
Q Consensus 75 ~~~~~~~~~~~~~~-~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~ 142 (197)
..|.+++|+|++.. ++++ +++|+ +..+. +|...|.+++|+|+.-+|++++.|+.|++||..+
T Consensus 148 ~~v~~v~f~p~~~~~l~s~s~D~~v~lwd~~~~~~~~~l~-~H~~~V~~v~fspdg~~las~s~D~~i~lwd~~~----- 221 (611)
T 1nr0_A 148 RAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFG-EHTKFVHSVRYNPDGSLFASTGGDGTIVLYNGVD----- 221 (611)
T ss_dssp SCEEEEEECSSSSCEEEEEETTSCEEEEETTTBEEEEEEC-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-----
T ss_pred CCceEEEECCCCCeEEEEEeCCCeEEEEECCCCeEeeeec-cccCceEEEEECCCCCEEEEEECCCcEEEEECCC-----
Confidence 78999999999875 6654 89999 45677 8999999999995554559999999999999876
Q ss_pred eeeeeeec-------CceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 143 IETIGNFE-------DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 143 ~~~~~~~~-------~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
++.+..+. +|...|.+++|+|+|++|++++.|++|++||+++++....
T Consensus 222 g~~~~~~~~~~~~~~~h~~~V~~v~~spdg~~l~s~s~D~~v~lWd~~~~~~~~~ 276 (611)
T 1nr0_A 222 GTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKIWNVATLKVEKT 276 (611)
T ss_dssp CCEEEECBCTTSSSCSSSSCEEEEEECTTSSEEEEEETTSEEEEEETTTTEEEEE
T ss_pred CcEeeeeccccccccccCCCEEEEEECCCCCEEEEEeCCCeEEEEeCCCCceeee
Confidence 45555552 7999999999999999999999999999999988765443
No 42
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=8.1e-25 Score=163.43 Aligned_cols=175 Identities=18% Similarity=0.227 Sum_probs=140.8
Q ss_pred cccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCe
Q psy13207 6 LQSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLA 77 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~ 77 (197)
+..++.+++|++. ..+.+|..+|.+++|+|+.++++|++|+.||.|++||+.+++.. ....+. +...+
T Consensus 29 ~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iwd~~~~~~~----~~~~~~~~~~~v 104 (379)
T 3jrp_A 29 CSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWS----QIAVHAVHSASV 104 (379)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSCEEEEEEETTEEE----EEEEECCCSSCE
T ss_pred EECCCcEEEEecCCCcceeeeEecCCCCcEEEEEeCCCCCCCEEEEeccCCEEEEEEcCCCcee----EeeeecCCCcce
Confidence 3568899999875 35789999999999986533789999999999999999876421 112222 36789
Q ss_pred eeEEEccC--CCcccce-----eEEEE--------eeEecccCCCceeEEEEcC-------------CCeEEEEeeCCCe
Q psy13207 78 SCLTWNHS--FSRFNSI-----SIMYE--------AHSINAEHKDLIHDVAYDY-------------YGLRMATCSSDQN 129 (197)
Q Consensus 78 ~~~~~~~~--~~~~~~~-----~~~~~--------~~~~~~~~~~~i~~~~~~~-------------~~~~~~s~~~d~~ 129 (197)
.+++|+|+ +..++++ +++|+ ...+. .|...|.+++|++ +.-.|++++.|+.
T Consensus 105 ~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~ 183 (379)
T 3jrp_A 105 NSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID-AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNL 183 (379)
T ss_dssp EEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEEEE-CCTTCEEEEEECCCC----------CTTCEEEEEETTSC
T ss_pred EEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEEec-CCCCceEEEEEcCccccccccccCCCCCCEEEEEeCCCe
Confidence 99999999 8887665 79999 33444 7899999999996 4555699999999
Q ss_pred EEEEEccCCcccceeeeeeecCceecEEEEEEccC---CCEEEEEeCCCcEEEEEcCCCc
Q psy13207 130 IKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT---GTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 130 i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~---~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
|++||+++.... ......+.+|...|.+++|+|+ +++|++++.||.|++||++...
T Consensus 184 i~i~d~~~~~~~-~~~~~~~~~h~~~v~~~~~sp~~~~~~~l~s~~~dg~i~iwd~~~~~ 242 (379)
T 3jrp_A 184 VKIWKYNSDAQT-YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 242 (379)
T ss_dssp EEEEEEETTTTE-EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEETTSCEEEEEESSTT
T ss_pred EEEEEecCCCcc-eeeEEEEecccCcEeEEEECCCCCCCCeEEEEeCCCEEEEEeCCCCC
Confidence 999999763211 3456678899999999999999 8999999999999999998753
No 43
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.94 E-value=5.2e-25 Score=164.31 Aligned_cols=181 Identities=15% Similarity=0.148 Sum_probs=143.1
Q ss_pred ccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 7 QSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 7 ~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
..++.+++|+.. ..+.+|...|.+++|+|+ +++|++++.||.|++||+.+.+...... ...+...+.+
T Consensus 27 ~~d~~v~i~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~---~~~~~~~v~~ 101 (372)
T 1k8k_C 27 PNNHEVHIYEKSGNKWVQVHELKEHNGQVTGVDWAPD--SNRIVTCGTDRNAYVWTLKGRTWKPTLV---ILRINRAARC 101 (372)
T ss_dssp CSSSEEEEEEEETTEEEEEEEEECCSSCEEEEEEETT--TTEEEEEETTSCEEEEEEETTEEEEEEE---CCCCSSCEEE
T ss_pred eCCCEEEEEeCCCCcEEeeeeecCCCCcccEEEEeCC--CCEEEEEcCCCeEEEEECCCCeeeeeEE---eecCCCceeE
Confidence 467889999754 357789999999999998 9999999999999999997765322211 1223678999
Q ss_pred EEEccCCCcccce-----eEEEEe---------eEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCc------
Q psy13207 80 LTWNHSFSRFNSI-----SIMYEA---------HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGT------ 139 (197)
Q Consensus 80 ~~~~~~~~~~~~~-----~~~~~~---------~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~------ 139 (197)
++|+|++++++++ +++|++ ..+...|...|.+++|+++.-+|++++.|+.|++||++...
T Consensus 102 ~~~~~~~~~l~~~~~d~~v~i~d~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~ 181 (372)
T 1k8k_C 102 VRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPA 181 (372)
T ss_dssp EEECTTSSEEEEEETTSSEEEEEEETTTTEEEEEEECTTCCSCEEEEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCC
T ss_pred EEECCCCCEEEEEeCCCEEEEEEecCCCcceeeeeeecccCCCeeEEEEcCCCCEEEEEcCCCCEEEEEccccccccccc
Confidence 9999999998766 789982 23323688999999999554444999999999999964210
Q ss_pred -------ccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 140 -------RFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 140 -------~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
......+..+.+|...|.+++|+|++++|++++.||.|++||+++++....+.
T Consensus 182 ~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 241 (372)
T 1k8k_C 182 PTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKMAVATLA 241 (372)
T ss_dssp CBTTBSCCCTTCEEEECCCCSSCEEEEEECSSSSEEEEEETTTEEEEEEGGGTTEEEEEE
T ss_pred ccccccccchhhheEecCCCCCeEEEEEECCCCCEEEEEeCCCEEEEEECCCCceeEEEc
Confidence 01246777788899999999999999999999999999999999877655544
No 44
>2ymu_A WD-40 repeat protein; unknown function, two domains; 1.79A {Nostoc punctiforme}
Probab=99.94 E-value=4.2e-25 Score=173.88 Aligned_cols=171 Identities=20% Similarity=0.350 Sum_probs=140.5
Q ss_pred cccccccceeee----eeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 6 LQSEKCLNQWTR----RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 6 ~~~~~~~~~w~~----~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
+..++.+++|+. ...+.+|...|.+++|+|+ +++|++++.|+.|++||... +.+..+ ..+...+.+++
T Consensus 362 ~~~dg~v~~~~~~~~~~~~~~~~~~~v~~~~~s~d--g~~l~~~~~d~~v~~~~~~~-~~~~~~-----~~~~~~v~~~~ 433 (577)
T 2ymu_A 362 ASDDKTVKLWNRNGQLLQTLTGHSSSVRGVAFSPD--GQTIASASDDKTVKLWNRNG-QLLQTL-----TGHSSSVWGVA 433 (577)
T ss_dssp EETTSEEEEEETTCCEEEEEECCSSCEEEEEECTT--SSCEEEEETTSEEEEECTTC-CEEEEE-----ECCSSCEEEEE
T ss_pred EeCCCEEEEEcCCCCEEEEecCCCCCeEEEEECCC--CCEEEEEeCCCEEEEEeCCC-CEEEEe-----cCCCCCeEEEE
Confidence 356788899974 3457889999999999999 99999999999999999643 222111 12367899999
Q ss_pred EccCCCcccce-----eEEEE-----eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC
Q psy13207 82 WNHSFSRFNSI-----SIMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED 151 (197)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 151 (197)
|+|++++++++ +++|+ +..+. +|...|.+++|+|+.-+|++++.|+.|++||.. .+.+..+.+
T Consensus 434 ~s~d~~~l~~~~~d~~v~~w~~~~~~~~~~~-~~~~~v~~~~~spd~~~las~~~d~~i~iw~~~------~~~~~~~~~ 506 (577)
T 2ymu_A 434 FSPDDQTIASASDDKTVKLWNRNGQLLQTLT-GHSSSVRGVAFSPDGQTIASASDDKTVKLWNRN------GQLLQTLTG 506 (577)
T ss_dssp ECTTSSEEEEEETTSEEEEEETTSCEEEEEE-CCSSCEEEEEECTTSCEEEEEETTSEEEEEETT------SCEEEEEEC
T ss_pred ECCCCCEEEEEcCCCEEEEEECCCCEEEEEc-CCCCCEEEEEEcCCCCEEEEEeCCCEEEEEcCC------CCEEEEEeC
Confidence 99999998765 79999 66677 899999999999555455999999999999964 567788899
Q ss_pred ceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 152 HYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 152 h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
|...|.+++|+|+|++|++++.||.|++||. +++.+..+.
T Consensus 507 h~~~v~~l~~s~dg~~l~s~~~dg~v~lwd~-~~~~~~~~~ 546 (577)
T 2ymu_A 507 HSSSVRGVAFSPDGQTIASASDDKTVKLWNR-NGQLLQTLT 546 (577)
T ss_dssp CSSCEEEEEECTTSSCEEEEETTSEEEEECT-TSCEEEEEE
T ss_pred CCCCEEEEEEcCCCCEEEEEECcCEEEEEeC-CCCEEEEEc
Confidence 9999999999999999999999999999996 344444443
No 45
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.94 E-value=6.3e-25 Score=166.20 Aligned_cols=172 Identities=16% Similarity=0.201 Sum_probs=138.8
Q ss_pred cccccccceeeeee---------eecCCCcceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccce-eccceec-c
Q psy13207 6 LQSEKCLNQWTRRS---------NLVDSRTSVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQW-CLQHEVA-C 73 (197)
Q Consensus 6 ~~~~~~~~~w~~~~---------~~~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~-~~~~~~~-~ 73 (197)
+..++.+++|++.. .+.+|.++|.+++|+| + +++|++|+.||+|++||+.++...... .....+. +
T Consensus 53 ~~~~g~i~v~~~~~~~~~~~~~~~~~~h~~~V~~~~~~p~~--~~~l~s~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h 130 (402)
T 2aq5_A 53 ASGGGAFLVLPLGKTGRVDKNVPLVCGHTAPVLDIAWCPHN--DNVIASGSEDCTVMVWEIPDGGLVLPLREPVITLEGH 130 (402)
T ss_dssp CSSSCCEEEEETTCCEECCTTCCCBCCCSSCEEEEEECTTC--TTEEEEEETTSEEEEEECCTTCCSSCBCSCSEEEECC
T ss_pred EcCCCEEEEEECccCCCCCCCCceEecCCCCEEEEEeCCCC--CCEEEEEeCCCeEEEEEccCCCCccccCCceEEecCC
Confidence 45678999998632 3678999999999999 7 899999999999999999877432211 1122233 3
Q ss_pred CCCeeeEEEccCC-Ccccce-----eEEEE------eeEe--cccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccC
Q psy13207 74 PTLASCLTWNHSF-SRFNSI-----SIMYE------AHSI--NAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVM 137 (197)
Q Consensus 74 ~~~~~~~~~~~~~-~~~~~~-----~~~~~------~~~~--~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~ 137 (197)
...|.+++|+|++ ..++++ +++|| +..+ . .|...|.+++|+ ++.+ ++++.|+.|++||+++
T Consensus 131 ~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l--~~~~~d~~i~iwd~~~ 207 (402)
T 2aq5_A 131 TKRVGIVAWHPTAQNVLLSAGCDNVILVWDVGTGAAVLTLGPD-VHPDTIYSVDWSRDGALI--CTSCRDKRVRVIEPRK 207 (402)
T ss_dssp SSCEEEEEECSSBTTEEEEEETTSCEEEEETTTTEEEEEECTT-TCCSCEEEEEECTTSSCE--EEEETTSEEEEEETTT
T ss_pred CCeEEEEEECcCCCCEEEEEcCCCEEEEEECCCCCccEEEecC-CCCCceEEEEECCCCCEE--EEEecCCcEEEEeCCC
Confidence 6789999999998 466554 89999 5566 5 799999999999 5556 9999999999999986
Q ss_pred Ccccceeeeeee-cCceec-EEEEEEccCCCEEEEE---eCCCcEEEEEcCCCcc
Q psy13207 138 GTRFDIETIGNF-EDHYCT-VWRVSWNITGTIVASS---GDDGCVRLWKLKKKRK 187 (197)
Q Consensus 138 ~~~~~~~~~~~~-~~h~~~-v~~~~~~p~~~~l~~~---~~dg~i~iw~~~~~~~ 187 (197)
...+..+ .+|... +.+++|+|++++|++| +.|+.|++||+++.+.
T Consensus 208 -----~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~~~~~ 257 (402)
T 2aq5_A 208 -----GTVVAEKDRPHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTKHLEE 257 (402)
T ss_dssp -----TEEEEEEECSSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETTBCSS
T ss_pred -----CceeeeeccCCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCccccC
Confidence 5666666 678765 8999999999999999 7999999999987654
No 46
>1erj_A Transcriptional repressor TUP1; beta-propeller, transcription inhibitor; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1
Probab=99.94 E-value=4.3e-25 Score=166.90 Aligned_cols=172 Identities=17% Similarity=0.211 Sum_probs=136.6
Q ss_pred cccccccceeeeee----eecCCCcceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccce--eccCCCee
Q psy13207 6 LQSEKCLNQWTRRS----NLVDSRTSVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHE--VACPTLAS 78 (197)
Q Consensus 6 ~~~~~~~~~w~~~~----~~~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~--~~~~~~~~ 78 (197)
+..|+++++|++.. ....+...+.+++|+| + +.+|++|+.|+.|++||+.++..+..+..... ..+...+.
T Consensus 183 ~s~d~~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~s~d~~v~iwd~~~~~~~~~~~~~~~~~~~h~~~v~ 260 (393)
T 1erj_A 183 GSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGD--GKYIAAGSLDRAVRVWDSETGFLVERLDSENESGTGHKDSVY 260 (393)
T ss_dssp EETTSEEEEEETTTTEEEEEEECSSCEEEEEECSTT--CCEEEEEETTSCEEEEETTTCCEEEEEC------CCCSSCEE
T ss_pred ecCCCcEEEEECCCCeeEEEEEcCCCcEEEEEECCC--CCEEEEEcCCCcEEEEECCCCcEEEeecccccCCCCCCCCEE
Confidence 45788999998642 1123667899999999 6 89999999999999999988765443321111 12367899
Q ss_pred eEEEccCCCcccce-----eEEEEee------------------EecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEc
Q psy13207 79 CLTWNHSFSRFNSI-----SIMYEAH------------------SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRD 135 (197)
Q Consensus 79 ~~~~~~~~~~~~~~-----~~~~~~~------------------~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~ 135 (197)
+++|+|++.+++++ +++||+. .+. +|...|.+++|+++.-+|++|+.|+.|++||.
T Consensus 261 ~v~~~~~g~~l~s~s~d~~v~~wd~~~~~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~sgs~D~~v~iwd~ 339 (393)
T 1erj_A 261 SVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYI-GHKDFVLSVATTQNDEYILSGSKDRGVLFWDK 339 (393)
T ss_dssp EEEECTTSSEEEEEETTSEEEEEEC---------------CEEEEEE-CCSSCEEEEEECGGGCEEEEEETTSEEEEEET
T ss_pred EEEECCCCCEEEEEeCCCEEEEEECCCCCCcccccCCCCCcceEEEe-cccCcEEEEEECCCCCEEEEEeCCCeEEEEEC
Confidence 99999999998766 7999932 344 78899999999944334499999999999999
Q ss_pred cCCcccceeeeeeecCceecEEEEEEcc------CCCEEEEEeCCCcEEEEEcCCC
Q psy13207 136 VMGTRFDIETIGNFEDHYCTVWRVSWNI------TGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 136 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p------~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
++ ...+..+.+|...|.+++|+| ++++|++|+.||+|++|+++..
T Consensus 340 ~~-----~~~~~~l~~h~~~v~~v~~~~~~~~~p~~~~l~sgs~Dg~i~iW~~~~~ 390 (393)
T 1erj_A 340 KS-----GNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKKI 390 (393)
T ss_dssp TT-----CCEEEEEECCSSCEEEEEECSSCTTCTTCEEEEEEETTSEEEEEEEEEC
T ss_pred CC-----CeEEEEECCCCCCEEEEEecCCcCcCCCCCEEEEECCCCcEEECccccc
Confidence 77 677788899999999999986 6889999999999999998653
No 47
>3jrp_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum; 2.60A {Saccharomyces cerevisiae}
Probab=99.94 E-value=1.1e-24 Score=162.81 Aligned_cols=181 Identities=22% Similarity=0.301 Sum_probs=140.9
Q ss_pred cccccccceeeeee-------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 6 LQSEKCLNQWTRRS-------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
+..|+.+++|++.. .+.+|...|.+++|+|+..+.+|++++.|+.|++||+.......... ...+...+.
T Consensus 75 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~~---~~~~~~~v~ 151 (379)
T 3jrp_A 75 CSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPII---IDAHAIGVN 151 (379)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCTTSCCCEEE---EECCTTCEE
T ss_pred eccCCEEEEEEcCCCceeEeeeecCCCcceEEEEeCCCCCCCEEEEecCCCcEEEEecCCCCceeeEE---ecCCCCceE
Confidence 45688999998653 46689999999999997335789999999999999998764332221 112367899
Q ss_pred eEEEcc-------------CCCcccce-----eEEEE----------eeEecccCCCceeEEEEcCC---CeEEEEeeCC
Q psy13207 79 CLTWNH-------------SFSRFNSI-----SIMYE----------AHSINAEHKDLIHDVAYDYY---GLRMATCSSD 127 (197)
Q Consensus 79 ~~~~~~-------------~~~~~~~~-----~~~~~----------~~~~~~~~~~~i~~~~~~~~---~~~~~s~~~d 127 (197)
+++|+| ++..++++ +++|| +..+. +|...|.+++|+++ .-+|++++.|
T Consensus 152 ~~~~~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~~~l~s~~~d 230 (379)
T 3jrp_A 152 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRSYLASVSQD 230 (379)
T ss_dssp EEEECCCC----------CTTCEEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSEEEEEEETT
T ss_pred EEEEcCccccccccccCCCCCCEEEEEeCCCeEEEEEecCCCcceeeEEEEe-cccCcEeEEEECCCCCCCCeEEEEeCC
Confidence 999999 57777665 79998 24555 79999999999976 5666999999
Q ss_pred CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 128 QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 128 ~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
+.|++||+++........+.....|...|.+++|+|++++|++++.||.|++|+++....+..
T Consensus 231 g~i~iwd~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~g~~l~~~~~dg~i~iw~~~~~~~~~~ 293 (379)
T 3jrp_A 231 RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEP 293 (379)
T ss_dssp SCEEEEEESSTTSCCEEEESSSSCCSSCEEEEEECSSSCCEEEEESSSSEEEEEEEETTEEEE
T ss_pred CEEEEEeCCCCCccceeeeeccccCCCcEEEEEEcCCCCEEEEecCCCcEEEEeCCCCCcccc
Confidence 999999998632211223333445888999999999999999999999999999986554443
No 48
>2xzm_R RACK1; ribosome, translation; 3.93A {Tetrahymena thermophila} PDB: 2xzn_R
Probab=99.94 E-value=1.8e-24 Score=160.68 Aligned_cols=164 Identities=17% Similarity=0.131 Sum_probs=128.0
Q ss_pred eeeeeeeecCCCcceeEEEE-----CC-CCCCcEEEEEeCCCcEEEEEcCCcccccce-eccceec-cCCCeeeEEEccC
Q psy13207 14 QWTRRSNLVDSRTSVTDVKF-----GP-KQLGLVLATCAADGLVRIYEAPDVMNLSQW-CLQHEVA-CPTLASCLTWNHS 85 (197)
Q Consensus 14 ~w~~~~~~~~h~~~v~~~~~-----~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~-~~~~~~~-~~~~~~~~~~~~~ 85 (197)
...+...|.+|.++|+++.| ++ + +.+|+||+.|++|++||+...+..... .....+. +...|.+++|+|+
T Consensus 10 ~~~~~~~l~gH~~~V~~~~~~~s~~~~~d--~~~l~sgs~D~~v~iWd~~~~~~~~~~~~~~~~l~~h~~~V~~~~~~~~ 87 (343)
T 2xzm_R 10 QVVKRGILEGHSDWVTSIVAGFSQKENED--SPVLISGSRDKTVMIWKLYEEEQNGYFGIPHKALTGHNHFVSDLALSQE 87 (343)
T ss_dssp EEEEEEEEECCSSCEEEEEECCCSSTTCC--CCEEEEEETTSCEEEEEECSSCCSSBSEEEEEEECCCSSCEEEEEECSS
T ss_pred EeeeeeeeccchhhhhheeeEEEeecCCC--CCEEEEEcCCCEEEEEECCcCCcccccccccchhccCCCceEEEEECCC
Confidence 34556789999999999999 66 6 899999999999999999765432111 1122333 3678999999999
Q ss_pred CCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCcee
Q psy13207 86 FSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC 154 (197)
Q Consensus 86 ~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~ 154 (197)
+.+++++ +++|| +..+. +|...|.+++|+++.-+|++++.|+.|++||+... .........+|..
T Consensus 88 ~~~l~s~s~D~~v~lwd~~~~~~~~~~~-~h~~~v~~v~~sp~~~~l~s~~~d~~i~~wd~~~~---~~~~~~~~~~~~~ 163 (343)
T 2xzm_R 88 NCFAISSSWDKTLRLWDLRTGTTYKRFV-GHQSEVYSVAFSPDNRQILSAGAEREIKLWNILGE---CKFSSAEKENHSD 163 (343)
T ss_dssp TTEEEEEETTSEEEEEETTSSCEEEEEE-CCCSCEEEEEECSSTTEEEEEETTSCEEEEESSSC---EEEECCTTTSCSS
T ss_pred CCEEEEEcCCCcEEEEECCCCcEEEEEc-CCCCcEEEEEECCCCCEEEEEcCCCEEEEEeccCC---ceeeeecccCCCc
Confidence 9998765 89999 56677 89999999999955444499999999999998631 0111122347889
Q ss_pred cEEEEEEccCC----------CEEEEEeCCCcEEEEEcC
Q psy13207 155 TVWRVSWNITG----------TIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 155 ~v~~~~~~p~~----------~~l~~~~~dg~i~iw~~~ 183 (197)
.|.+++|+|++ .+|++++.||+|++||..
T Consensus 164 ~v~~~~~~~~~~~~~~~~~~~~~l~s~~~d~~i~iwd~~ 202 (343)
T 2xzm_R 164 WVSCVRYSPIMKSANKVQPFAPYFASVGWDGRLKVWNTN 202 (343)
T ss_dssp CEEEEEECCCCCSCSCCCSSCCEEEEEETTSEEEEEETT
T ss_pred eeeeeeeccccccccccCCCCCEEEEEcCCCEEEEEcCC
Confidence 99999999987 799999999999999953
No 49
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.94 E-value=8.3e-26 Score=176.34 Aligned_cols=165 Identities=9% Similarity=0.064 Sum_probs=131.1
Q ss_pred cccccccceeeeee----------------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccc
Q psy13207 6 LQSEKCLNQWTRRS----------------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQH 69 (197)
Q Consensus 6 ~~~~~~~~~w~~~~----------------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~ 69 (197)
+..|+++++|++.. .+.+|...|.+++|+|+ + .|++|+.||+|++||++++.... .
T Consensus 231 ~s~DgtvrlWd~~~~~~~~~~~~~~~~p~~~l~~h~~~v~sv~~s~~--~-~lasgs~DgtV~lWD~~~~~~~~-----~ 302 (524)
T 2j04_B 231 VSQEGTINFLEIIDNATDVHVFKMCEKPSLTLSLADSLITTFDFLSP--T-TVVCGFKNGFVAEFDLTDPEVPS-----F 302 (524)
T ss_dssp EETTSCEEEEECCCCSSSSSEEECCCSCSEEECCTTTCEEEEEESSS--S-EEEEEETTSEEEEEETTBCSSCS-----E
T ss_pred EecCCeEEEEEcCCCccccccceeecCceEEEEcCCCCEEEEEecCC--C-eEEEEeCCCEEEEEECCCCCCce-----E
Confidence 45689999998742 46789999999999985 5 79999999999999998763221 1
Q ss_pred eec-cCCCeeeE--EEccCC-Ccccce-----eEEEE------eeEecccCCC--ceeEEEEcCCCeEEEEeeCCCeEEE
Q psy13207 70 EVA-CPTLASCL--TWNHSF-SRFNSI-----SIMYE------AHSINAEHKD--LIHDVAYDYYGLRMATCSSDQNIKV 132 (197)
Q Consensus 70 ~~~-~~~~~~~~--~~~~~~-~~~~~~-----~~~~~------~~~~~~~~~~--~i~~~~~~~~~~~~~s~~~d~~i~~ 132 (197)
.+. +...|.++ .|+|++ .+++++ +++|| +..+. +|.. .|.+++|+|+.-.|++++.|+.|++
T Consensus 303 ~~~~H~~~V~sv~~~~s~~g~~~laS~S~D~tvklWD~~~~~~~~~~~-~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~l 381 (524)
T 2j04_B 303 YDQVHDSYILSVSTAYSDFEDTVVSTVAVDGYFYIFNPKDIATTKTTV-SRFRGSNLVPVVYCPQIYSYIYSDGASSLRA 381 (524)
T ss_dssp EEECSSSCEEEEEEECCTTSCCEEEEEETTSEEEEECGGGHHHHCEEE-EECSCCSCCCEEEETTTTEEEEECSSSEEEE
T ss_pred EeecccccEEEEEEEcCCCCCeEEEEeccCCeEEEEECCCCCcccccc-cccccCcccceEeCCCcCeEEEeCCCCcEEE
Confidence 122 36789998 578887 677665 89999 33444 5543 4889999965434499999999999
Q ss_pred EEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 133 TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 133 ~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
||+++ ..++..+.+|...|++++|+|+|++|++|+.||+|++||+..
T Consensus 382 wd~~~-----~~~~~~l~gH~~~V~sva~Sp~g~~l~Sgs~Dgtv~lwd~~~ 428 (524)
T 2j04_B 382 VPSRA-----AFAVHPLVSRETTITAIGVSRLHPMVLAGSADGSLIITNAAR 428 (524)
T ss_dssp EETTC-----TTCCEEEEECSSCEEEEECCSSCCBCEEEETTTEEECCBSCS
T ss_pred EECcc-----cccceeeecCCCceEEEEeCCCCCeEEEEECCCEEEEEechH
Confidence 99986 455566778999999999999999999999999999999864
No 50
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.94 E-value=7.7e-25 Score=164.54 Aligned_cols=178 Identities=13% Similarity=0.087 Sum_probs=139.0
Q ss_pred cccccccceeeeee-----ee--cCCCcceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCe
Q psy13207 6 LQSEKCLNQWTRRS-----NL--VDSRTSVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLA 77 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-----~~--~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~ 77 (197)
+..|+.+++|++.. .+ .+|...|.+++|+| + +.+|++++.|+.|++||+... ....+. ........+
T Consensus 92 ~~~dg~i~iwd~~~~~~~~~~~~~~h~~~v~~~~~~~~~--~~~l~s~~~d~~i~iwd~~~~-~~~~~~--~~~~~~~~v 166 (383)
T 3ei3_B 92 GSKGGDIILWDYDVQNKTSFIQGMGPGDAITGMKFNQFN--TNQLFVSSIRGATTLRDFSGS-VIQVFA--KTDSWDYWY 166 (383)
T ss_dssp EEBTSCEEEEETTSTTCEEEECCCSTTCBEEEEEEETTE--EEEEEEEETTTEEEEEETTSC-EEEEEE--CCCCSSCCE
T ss_pred EcCCCeEEEEeCCCcccceeeecCCcCCceeEEEeCCCC--CCEEEEEeCCCEEEEEECCCC-ceEEEe--ccCCCCCCe
Confidence 45688999998752 23 47999999999999 5 799999999999999999853 221111 111124679
Q ss_pred eeEEEccCCCcccce-----eEEEE-----eeEecccCCCceeEEEEcCCCe-EEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 78 SCLTWNHSFSRFNSI-----SIMYE-----AHSINAEHKDLIHDVAYDYYGL-RMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 78 ~~~~~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~i~~~~~~~~~~-~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
.+++|+|++.+++++ +++|| +..+. .|...|.+++|+++.- +|++++.|+.|++||+++.... ...+
T Consensus 167 ~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~h~~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~-~~~~ 244 (383)
T 3ei3_B 167 CCVDVSVSRQMLATGDSTGRLLLLGLDGHEIFKEK-LHKAKVTHAEFNPRCDWLMATSSVDATVKLWDLRNIKDK-NSYI 244 (383)
T ss_dssp EEEEEETTTTEEEEEETTSEEEEEETTSCEEEEEE-CSSSCEEEEEECSSCTTEEEEEETTSEEEEEEGGGCCST-TCEE
T ss_pred EEEEECCCCCEEEEECCCCCEEEEECCCCEEEEec-cCCCcEEEEEECCCCCCEEEEEeCCCEEEEEeCCCCCcc-cceE
Confidence 999999999998765 79999 56667 8999999999994422 3399999999999999763211 2334
Q ss_pred eeecCceecEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 147 GNFEDHYCTVWRVSWNI-TGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
..+ +|...|.+++|+| ++++|++++.|+.|++||+++.+....+
T Consensus 245 ~~~-~~~~~v~~~~~s~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~ 289 (383)
T 3ei3_B 245 AEM-PHEKPVNAAYFNPTDSTKLLTTDQRNEIRVYSSYDWSKPDQI 289 (383)
T ss_dssp EEE-ECSSCEEEEEECTTTSCEEEEEESSSEEEEEETTBTTSCSEE
T ss_pred EEe-cCCCceEEEEEcCCCCCEEEEEcCCCcEEEEECCCCcccccc
Confidence 444 6899999999999 9999999999999999999887654443
No 51
>4h5i_A Guanine nucleotide-exchange factor SEC12; copii vesicle budding, potassium binding site, beta propelle protein transport; 1.36A {Saccharomyces cerevisiae} PDB: 4h5j_A
Probab=99.93 E-value=1.3e-24 Score=162.96 Aligned_cols=176 Identities=12% Similarity=0.126 Sum_probs=132.4
Q ss_pred ccccccceeeeeee--------------ecCCCcceeEEEECCCCCCcEEE--EEeCCCcEEEEEcCCcccccceeccce
Q psy13207 7 QSEKCLNQWTRRSN--------------LVDSRTSVTDVKFGPKQLGLVLA--TCAADGLVRIYEAPDVMNLSQWCLQHE 70 (197)
Q Consensus 7 ~~~~~~~~w~~~~~--------------~~~h~~~v~~~~~~~~~~~~~l~--s~~~dg~v~iw~~~~~~~~~~~~~~~~ 70 (197)
..++.+|+|++... ...+...+.+++|+|+ |++++ +++.|++|+|||+.+.+.+..
T Consensus 101 ~~d~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~fSpD--g~~la~as~~~d~~i~iwd~~~~~~~~~------ 172 (365)
T 4h5i_A 101 KGNKHLRKFKYDKVNDQLEFLTSVDFDASTNADDYTKLVYISRE--GTVAAIASSKVPAIMRIIDPSDLTEKFE------ 172 (365)
T ss_dssp SCCCCEEEEEEETTTTEEEEEEEECSSCCCCTTCCEEEEEECTT--SSCEEEEESCSSCEEEEEETTTTEEEEE------
T ss_pred cCCCcEEEEEecCCCceEEEeeeeceeecCCcccCEEEEEEcCC--CCEEEEEECCCCCEEEEeECCCCcEEEE------
Confidence 45778888876421 1234556899999999 88876 455899999999998765432
Q ss_pred eccCCCeeeEEEccCCCcccce----eEEEE-------eeEecccCCCceeEEEEcCCCeEEEEeeCCC----eEEEEEc
Q psy13207 71 VACPTLASCLTWNHSFSRFNSI----SIMYE-------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQ----NIKVTRD 135 (197)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~----~i~~~d~ 135 (197)
+.+...|.+++|+|++++++++ +.+|+ .......|...|.+++|+|+.-++++++.|+ .+++|+.
T Consensus 173 ~~~~~~V~~v~fspdg~~l~s~s~~~~~~~~~~~~~~~~~~~~~~~~~~v~~v~fspdg~~l~~~s~d~~~~~~i~~~~~ 252 (365)
T 4h5i_A 173 IETRGEVKDLHFSTDGKVVAYITGSSLEVISTVTGSCIARKTDFDKNWSLSKINFIADDTVLIAASLKKGKGIVLTKISI 252 (365)
T ss_dssp EECSSCCCEEEECTTSSEEEEECSSCEEEEETTTCCEEEEECCCCTTEEEEEEEEEETTEEEEEEEESSSCCEEEEEEEE
T ss_pred eCCCCceEEEEEccCCceEEeccceeEEEEEeccCcceeeeecCCCCCCEEEEEEcCCCCEEEEEecCCcceeEEeeccc
Confidence 3346679999999999998765 56776 1122226888999999996555558888876 6788888
Q ss_pred cCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 136 VMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 136 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
..... .......+.+|...|++++|+|+|++||+|+.|++|+|||+++++.+..+
T Consensus 253 ~~~~~-~~~~~~~~~~~~~~V~~~~~Spdg~~lasgs~D~~V~iwd~~~~~~~~~~ 307 (365)
T 4h5i_A 253 KSGNT-SVLRSKQVTNRFKGITSMDVDMKGELAVLASNDNSIALVKLKDLSMSKIF 307 (365)
T ss_dssp ETTEE-EEEEEEEEESSCSCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred cccee-cceeeeeecCCCCCeEeEEECCCCCceEEEcCCCEEEEEECCCCcEEEEe
Confidence 65211 12234567789999999999999999999999999999999998776553
No 52
>3f3f_A Nucleoporin SEH1; structural protein, protein complex, nucleopori complex, nuclear pore complex, macromolecular assembly, MEM coat; 2.90A {Saccharomyces cerevisiae} PDB: 3f3g_A 3f3p_A 3ewe_A
Probab=99.93 E-value=2.8e-24 Score=158.36 Aligned_cols=163 Identities=18% Similarity=0.326 Sum_probs=129.0
Q ss_pred eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEEcc--CCCcccce---
Q psy13207 19 SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTWNH--SFSRFNSI--- 92 (197)
Q Consensus 19 ~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~--~~~~~~~~--- 92 (197)
..+.+|.++|++++|+|+ +++|++|+.||.|++||+.+.... +.....+. +...|.+++|+| ++.+++++
T Consensus 5 ~~~~gH~~~v~~~~~~~~--~~~l~~~~~dg~i~iw~~~~~~~~--~~~~~~~~~~~~~v~~~~~~~~~d~~~l~s~~~d 80 (351)
T 3f3f_A 5 PFDSGHDDLVHDVVYDFY--GRHVATCSSDQHIKVFKLDKDTSN--WELSDSWRAHDSSIVAIDWASPEYGRIIASASYD 80 (351)
T ss_dssp CEECCCSSCEEEEEECSS--SSEEEEEETTSEEEEEEECSSSCC--EEEEEEEECCSSCEEEEEECCGGGCSEEEEEETT
T ss_pred ccCcccccceeEEEEcCC--CCEEEEeeCCCeEEEEECCCCCCc--ceecceeccCCCcEEEEEEcCCCCCCEEEEEcCC
Confidence 457899999999999998 999999999999999999875432 12223333 377899999999 57887765
Q ss_pred --eEEEEe---------------eEecccCCCceeEEEEcCC--CeEEEEeeCCCeEEEEEccCCcccc-----------
Q psy13207 93 --SIMYEA---------------HSINAEHKDLIHDVAYDYY--GLRMATCSSDQNIKVTRDVMGTRFD----------- 142 (197)
Q Consensus 93 --~~~~~~---------------~~~~~~~~~~i~~~~~~~~--~~~~~s~~~d~~i~~~d~~~~~~~~----------- 142 (197)
+++|++ ..+. .|...|.+++|+++ .-+|++++.|+.|++||+++.....
T Consensus 81 g~v~vwd~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~ 159 (351)
T 3f3f_A 81 KTVKLWEEDPDQEECSGRRWNKLCTLN-DSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRSWTLTSEMKVL 159 (351)
T ss_dssp SCEEEEEECTTSCTTSSCSEEEEEEEC-CCSSCEEEEEECCGGGCSEEEEEETTCEEEEEECSSTTCTTCCEEEEEEESC
T ss_pred CeEEEEecCCCcccccccCcceeeeec-ccCCceeEEEEcCCCCCcEEEEecCCCcEEEecCCChHHhcccccccccccc
Confidence 799993 2344 78999999999955 4445999999999999987532110
Q ss_pred --------------------------------------------eeeeeeecCceecEEEEEEccCC----CEEEEEeCC
Q psy13207 143 --------------------------------------------IETIGNFEDHYCTVWRVSWNITG----TIVASSGDD 174 (197)
Q Consensus 143 --------------------------------------------~~~~~~~~~h~~~v~~~~~~p~~----~~l~~~~~d 174 (197)
...+..+.+|...|.+++|+|++ ++|++++.|
T Consensus 160 ~~~~~~~~~~~~~~~~~p~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~i~~~~~~p~~~~~~~~l~s~~~d 239 (351)
T 3f3f_A 160 SIPPANHLQSDFCLSWCPSRFSPEKLAVSALEQAIIYQRGKDGKLHVAAKLPGHKSLIRSISWAPSIGRWYQLIATGCKD 239 (351)
T ss_dssp SCCCSSCSCCCEEEEECCCSSSCCEEEEEETTEEEEEEECTTSCEEEEEECCCCCSCEEEEEECCCSSCSSEEEEEEETT
T ss_pred ccccCCcccceeEEEeccCCCCCcEEEEecCCCcEEEEccCCCceeeeeecCCCCcceeEEEECCCCCCcceEEEEEcCC
Confidence 01255567899999999999998 899999999
Q ss_pred CcEEEEEcCCCc
Q psy13207 175 GCVRLWKLKKKR 186 (197)
Q Consensus 175 g~i~iw~~~~~~ 186 (197)
|.|++||++...
T Consensus 240 g~i~iwd~~~~~ 251 (351)
T 3f3f_A 240 GRIRIFKITEKL 251 (351)
T ss_dssp SCEEEEEEEECC
T ss_pred CeEEEEeCCCCc
Confidence 999999998754
No 53
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.93 E-value=1.6e-24 Score=165.55 Aligned_cols=171 Identities=14% Similarity=0.162 Sum_probs=128.8
Q ss_pred ccccceeeeeeeecC------CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccc-----ccceeccceecc-C--
Q psy13207 9 EKCLNQWTRRSNLVD------SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMN-----LSQWCLQHEVAC-P-- 74 (197)
Q Consensus 9 ~~~~~~w~~~~~~~~------h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~-----~~~~~~~~~~~~-~-- 74 (197)
+.....|++.+.+.. |.+.|.+++|+|+ |++|++|+.||.|+||++.+.+. ...+.....+.+ .
T Consensus 6 ~~~~~~w~~~q~~~~~~~~~~~~~~V~~v~~s~~--g~~la~g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~ 83 (447)
T 3dw8_B 6 GGNDIQWCFSQVKGAVDDDVAEADIISTVEFNHS--GELLATGDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPE 83 (447)
T ss_dssp --CCCCCEEEECCSCSSSCCCGGGSEEEEEECSS--SSEEEEEETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCE
T ss_pred CCcceeEEEEEecccccccccccCcEEEEEECCC--CCEEEEEcCCCeEEEEEecCCCCCCcccccceeEeccccccccc
Confidence 445567777665433 6789999999998 99999999999999999987652 111222222322 3
Q ss_pred ----------CCeeeEEEccCC--Ccccce-----eEEEEeeE-------------------------------------
Q psy13207 75 ----------TLASCLTWNHSF--SRFNSI-----SIMYEAHS------------------------------------- 100 (197)
Q Consensus 75 ----------~~~~~~~~~~~~--~~~~~~-----~~~~~~~~------------------------------------- 100 (197)
..|.+++|+|++ ..++++ +++|++..
T Consensus 84 ~~~~~~~~~~~~V~~l~~~~~~~~~~l~s~s~d~~i~iw~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 163 (447)
T 3dw8_B 84 FDYLKSLEIEEKINKIRWLPQKNAAQFLLSTNDKTIKLWKISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLM 163 (447)
T ss_dssp EEGGGTEEECCCCCEEEECCCCSSSEEEEEECSSCEEEEEEEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEE
T ss_pred ccccccccccCceEEEEEcCCCCcceEEEeCCCCeEEEEecccccCCcceecccCccccccCcccccceEeccccchhee
Confidence 779999999998 566554 89999432
Q ss_pred ---------ecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeee-------eecCceecEEEEEEccC
Q psy13207 101 ---------INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIG-------NFEDHYCTVWRVSWNIT 164 (197)
Q Consensus 101 ---------~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~-------~~~~h~~~v~~~~~~p~ 164 (197)
.. +|...|.+++|+++.-+|++| .|+.|++||+++. ...+. .+.+|...|.+++|+|+
T Consensus 164 ~~~~~~~~~~~-~h~~~v~~~~~~~~~~~l~s~-~d~~i~iwd~~~~----~~~~~~~~~~~~~~~~~~~~v~~~~~~p~ 237 (447)
T 3dw8_B 164 VEASPRRIFAN-AHTYHINSISINSDYETYLSA-DDLRINLWHLEIT----DRSFNIVDIKPANMEELTEVITAAEFHPN 237 (447)
T ss_dssp EEEEEEEEECS-CCSSCCCEEEECTTSSEEEEE-CSSEEEEEETTEE----EEEEEEEECCCSSGGGCCCCEEEEEECSS
T ss_pred eeccceEEecc-CCCcceEEEEEcCCCCEEEEe-CCCeEEEEECCCC----CceeeeeecccccccccCcceEEEEECCC
Confidence 24 799999999999444444888 8999999999731 23333 36689999999999999
Q ss_pred C-CEEEEEeCCCcEEEEEcCCCcc
Q psy13207 165 G-TIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 165 ~-~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
+ ++|++++.||.|++||++++..
T Consensus 238 ~~~~l~s~~~dg~i~iwd~~~~~~ 261 (447)
T 3dw8_B 238 SCNTFVYSSSKGTIRLCDMRASAL 261 (447)
T ss_dssp CTTEEEEEETTSCEEEEETTTCSS
T ss_pred CCcEEEEEeCCCeEEEEECcCCcc
Confidence 8 9999999999999999998764
No 54
>4e54_B DNA damage-binding protein 2; beta barrel, double helix, DDB1:WD40 beta-barrel fold, DNA D DNA repair, HOST-virus interactions; HET: DNA 3DR; 2.85A {Homo sapiens} PDB: 3ei4_B*
Probab=99.93 E-value=3.3e-25 Score=169.55 Aligned_cols=166 Identities=13% Similarity=0.117 Sum_probs=127.4
Q ss_pred ceeeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEcc-CCCcccc
Q psy13207 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNH-SFSRFNS 91 (197)
Q Consensus 13 ~~w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 91 (197)
+.|.+.....+|...|+|++|+|.+ +.+||+|+.||+|+|||+.+.+...... ...+...|.+++|+| ++.+|++
T Consensus 107 ~~~~~~~~~~~~~~~V~~l~~~P~~-~~~lasGs~dg~i~lWd~~~~~~~~~~~---~~gH~~~V~~l~f~p~~~~~l~s 182 (435)
T 4e54_B 107 DSYRILQKAAPFDRRATSLAWHPTH-PSTVAVGSKGGDIMLWNFGIKDKPTFIK---GIGAGGSITGLKFNPLNTNQFYA 182 (435)
T ss_dssp TTTTSCCEEEECSSCEEEEEECSSC-TTCEEEEETTSCEEEECSSCCSCCEEEC---CCSSSCCCCEEEECSSCTTEEEE
T ss_pred cceeecccCCCCCCCEEEEEEeCCC-CCEEEEEeCCCEEEEEECCCCCceeEEE---ccCCCCCEEEEEEeCCCCCEEEE
Confidence 4445555667899999999999952 6799999999999999998765432211 112367899999998 5677766
Q ss_pred e-----eEEEE-----eeEecc--cCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEE
Q psy13207 92 I-----SIMYE-----AHSINA--EHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159 (197)
Q Consensus 92 ~-----~~~~~-----~~~~~~--~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~ 159 (197)
+ +++|| +..+.. .+...+.+++|+++.-+|++|+.||.|++||++. +.+..+.+|...|.++
T Consensus 183 ~s~D~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~g~~dg~i~~wd~~~------~~~~~~~~h~~~v~~v 256 (435)
T 4e54_B 183 SSMEGTTRLQDFKGNILRVFASSDTINIWFCSLDVSASSRMVVTGDNVGNVILLNMDG------KELWNLRMHKKKVTHV 256 (435)
T ss_dssp ECSSSCEEEEETTSCEEEEEECCSSCSCCCCCEEEETTTTEEEEECSSSBEEEEESSS------CBCCCSBCCSSCEEEE
T ss_pred EeCCCEEEEeeccCCceeEEeccCCCCccEEEEEECCCCCEEEEEeCCCcEeeeccCc------ceeEEEecccceEEee
Confidence 5 89999 223321 2344678899985444449999999999999863 5567788999999999
Q ss_pred EEccCCC-EEEEEeCCCcEEEEEcCCCcch
Q psy13207 160 SWNITGT-IVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 160 ~~~p~~~-~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
+|+|++. +|++++.|++|++||+++.+..
T Consensus 257 ~~~p~~~~~~~s~s~d~~v~iwd~~~~~~~ 286 (435)
T 4e54_B 257 ALNPCCDWFLATASVDQTVKIWDLRQVRGK 286 (435)
T ss_dssp EECTTCSSEEEEEETTSBCCEEETTTCCSS
T ss_pred eecCCCceEEEEecCcceeeEEeccccccc
Confidence 9999875 7889999999999999876543
No 55
>2j04_B YDR362CP, TAU91; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.5e-25 Score=173.67 Aligned_cols=180 Identities=13% Similarity=0.086 Sum_probs=131.7
Q ss_pred cccccccceeeeee---------eecCCCcceeEEEECCC----CCCcEEEEEeCCCcEEEEEcCCcccccc----e-ec
Q psy13207 6 LQSEKCLNQWTRRS---------NLVDSRTSVTDVKFGPK----QLGLVLATCAADGLVRIYEAPDVMNLSQ----W-CL 67 (197)
Q Consensus 6 ~~~~~~~~~w~~~~---------~~~~h~~~v~~~~~~~~----~~~~~l~s~~~dg~v~iw~~~~~~~~~~----~-~~ 67 (197)
+..|+++++|++.. .+.+|.+.|.+++|+|+ +++.+||+++.||+|+|||+..+..... . ..
T Consensus 179 ~s~D~tI~iWd~~~~~~~~~~~~~l~~~~~~V~~v~wsp~~~~~~~~~~LAs~s~DgtvrlWd~~~~~~~~~~~~~~~~p 258 (524)
T 2j04_B 179 EKHSSCIQIFKMNTSTLHCVKVQTIVHSFGEVWDLKWHEGCHAPHLVGCLSFVSQEGTINFLEIIDNATDVHVFKMCEKP 258 (524)
T ss_dssp ---CEEEEEEEEETTTCCEEEEEEEEECCCSEEEEEECSSCCCSSSSCEEEEEETTSCEEEEECCCCSSSSSEEECCCSC
T ss_pred CCCCceEEEEEccCCCCCceEEEEEEecCCcEEEEEECCCCCCCCCCceEEEEecCCeEEEEEcCCCccccccceeecCc
Confidence 56788999998742 24577889999999995 1257999999999999999986643210 0 01
Q ss_pred cceec-cCCCeeeEEEccCCCcccce-----eEEEEe-------eEecccCCCceeEEE--EcCCC-eEEEEeeCCCeEE
Q psy13207 68 QHEVA-CPTLASCLTWNHSFSRFNSI-----SIMYEA-------HSINAEHKDLIHDVA--YDYYG-LRMATCSSDQNIK 131 (197)
Q Consensus 68 ~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~~-------~~~~~~~~~~i~~~~--~~~~~-~~~~s~~~d~~i~ 131 (197)
...+. +...+.+++|++++ .|+++ +++||+ ..+. +|...|.+++ |+++. -+|+||+.|++|+
T Consensus 259 ~~~l~~h~~~v~sv~~s~~~-~lasgs~DgtV~lWD~~~~~~~~~~~~-~H~~~V~sv~~~~s~~g~~~laS~S~D~tvk 336 (524)
T 2j04_B 259 SLTLSLADSLITTFDFLSPT-TVVCGFKNGFVAEFDLTDPEVPSFYDQ-VHDSYILSVSTAYSDFEDTVVSTVAVDGYFY 336 (524)
T ss_dssp SEEECCTTTCEEEEEESSSS-EEEEEETTSEEEEEETTBCSSCSEEEE-CSSSCEEEEEEECCTTSCCEEEEEETTSEEE
T ss_pred eEEEEcCCCCEEEEEecCCC-eEEEEeCCCEEEEEECCCCCCceEEee-cccccEEEEEEEcCCCCCeEEEEeccCCeEE
Confidence 11222 25789999999875 56554 899992 2456 8999999994 55432 2339999999999
Q ss_pred EEEccCCcccceeeeeeecCcee--cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 132 VTRDVMGTRFDIETIGNFEDHYC--TVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 132 ~~d~~~~~~~~~~~~~~~~~h~~--~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
+||+++ .++...+.+|.. .|.+++|+|+++.+++++.|++|++||++++.....+.
T Consensus 337 lWD~~~-----~~~~~~~~~~~~~~~v~~v~fsp~~~~l~s~~~d~tv~lwd~~~~~~~~~l~ 394 (524)
T 2j04_B 337 IFNPKD-----IATTKTTVSRFRGSNLVPVVYCPQIYSYIYSDGASSLRAVPSRAAFAVHPLV 394 (524)
T ss_dssp EECGGG-----HHHHCEEEEECSCCSCCCEEEETTTTEEEEECSSSEEEEEETTCTTCCEEEE
T ss_pred EEECCC-----CCcccccccccccCcccceEeCCCcCeEEEeCCCCcEEEEECcccccceeee
Confidence 999976 444444555543 47899999999999999999999999999876544443
No 56
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.93 E-value=1.9e-24 Score=164.02 Aligned_cols=170 Identities=15% Similarity=0.163 Sum_probs=133.8
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..++.+++|++. ..+.+|...|.+++|+|+ +++|++|+.|++|++||+.+++.+..+. .+...|.++
T Consensus 115 ~~~dg~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~d~~i~iwd~~~~~~~~~~~-----~h~~~v~~~ 187 (420)
T 3vl1_A 115 GTTEGDIKVLDSNFNLQREIDQAHVSEITKLKFFPS--GEALISSSQDMQLKIWSVKDGSNPRTLI-----GHRATVTDI 187 (420)
T ss_dssp EETTSCEEEECTTSCEEEEETTSSSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTCCCCEEEE-----CCSSCEEEE
T ss_pred EECCCCEEEEeCCCcceeeecccccCccEEEEECCC--CCEEEEEeCCCeEEEEeCCCCcCceEEc-----CCCCcEEEE
Confidence 3567889999754 346799999999999998 9999999999999999999876543332 236789999
Q ss_pred EEccCCCcccce-----eEEEE------eeEecc--cCCCceeEEEE---------------------cCCCeEEEEeeC
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------AHSINA--EHKDLIHDVAY---------------------DYYGLRMATCSS 126 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------~~~~~~--~~~~~i~~~~~---------------------~~~~~~~~s~~~ 126 (197)
+|+|++..++++ +++|| +..+.. .+...+.+++| +++.-+|++++.
T Consensus 188 ~~~~~~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~ 267 (420)
T 3vl1_A 188 AIIDRGRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIALFVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHV 267 (420)
T ss_dssp EEETTTTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEEEECCCSSCGGGCCCCCCTTCSSCTTEEEEEEET
T ss_pred EEcCCCCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEEecCCcceeeecccCcccceEEcCCCCEEEEEcC
Confidence 999999988765 89999 334431 24444555554 544445599999
Q ss_pred CCeEEEEEccCCcccceeeeee-ecCceecEEEEEEccCCC-EEEEEeCCCcEEEEEcCCCcc
Q psy13207 127 DQNIKVTRDVMGTRFDIETIGN-FEDHYCTVWRVSWNITGT-IVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 127 d~~i~~~d~~~~~~~~~~~~~~-~~~h~~~v~~~~~~p~~~-~l~~~~~dg~i~iw~~~~~~~ 187 (197)
|+.|++||+++ ...+.. ...|...|.+++|+|+++ +|++++.||.|++||+++++.
T Consensus 268 dg~i~i~d~~~-----~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~i~vwd~~~~~~ 325 (420)
T 3vl1_A 268 SGVITVHNVFS-----KEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGMLAQWDLRSPEC 325 (420)
T ss_dssp TSCEEEEETTT-----CCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTS
T ss_pred CCeEEEEECCC-----CceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCeEEEEEcCCCcC
Confidence 99999999986 344443 345888999999999998 999999999999999988654
No 57
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.93 E-value=2.8e-24 Score=165.23 Aligned_cols=173 Identities=13% Similarity=0.160 Sum_probs=143.4
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..|+++++|+.. ..+.+|.++|.+++|+|+ + .|++|+.||+|++||+.+++.+..+. .+...+.++
T Consensus 138 gs~dg~i~vwd~~~~~~~~~~~~h~~~V~~l~~~~~--~-~l~s~s~dg~i~vwd~~~~~~~~~~~-----~h~~~v~~l 209 (464)
T 3v7d_B 138 GADDKMIRVYDSINKKFLLQLSGHDGGVWALKYAHG--G-ILVSGSTDRTVRVWDIKKGCCTHVFE-----GHNSTVRCL 209 (464)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEECST--T-EEEEEETTSCEEEEETTTTEEEEEEC-----CCSSCEEEE
T ss_pred EcCCCcEEEEECCCCcEEEEEeCCCcCEEEEEEcCC--C-EEEEEeCCCCEEEEECCCCcEEEEEC-----CCCCccEEE
Confidence 4678999999853 468899999999999997 6 89999999999999999876543222 136789999
Q ss_pred EEcc--CCCcccce-----eEEEEee-----------------------------EecccCCCceeEEEEcCCCeEEEEe
Q psy13207 81 TWNH--SFSRFNSI-----SIMYEAH-----------------------------SINAEHKDLIHDVAYDYYGLRMATC 124 (197)
Q Consensus 81 ~~~~--~~~~~~~~-----~~~~~~~-----------------------------~~~~~~~~~i~~~~~~~~~~~~~s~ 124 (197)
+|++ ++.+++++ +++|++. .+. +|...+.++..+++.+ +++
T Consensus 210 ~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~l--~~~ 286 (464)
T 3v7d_B 210 DIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEENPYFVGVLR-GHMASVRTVSGHGNIV--VSG 286 (464)
T ss_dssp EEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGGCTTEEEEEC-CCSSCEEEEEEETTEE--EEE
T ss_pred EEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCCCeEEEEEcc-CccceEEEEcCCCCEE--EEE
Confidence 9985 56667655 7999921 334 6888888887778888 999
Q ss_pred eCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhhh
Q psy13207 125 SSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEE 194 (197)
Q Consensus 125 ~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~ 194 (197)
+.|+.|++||+++ .+.+..+.+|...|.+++|+|+++++++|+.||.|++||+++++....+..+
T Consensus 287 ~~d~~i~vwd~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~sg~~dg~i~vwd~~~~~~~~~~~~h 351 (464)
T 3v7d_B 287 SYDNTLIVWDVAQ-----MKCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGH 351 (464)
T ss_dssp ETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEEETTTTEEEEEECCC
T ss_pred eCCCeEEEEECCC-----CcEEEEecCCCCCEEEEEEcCCCCEEEEEeCCCcEEEEECCCCcEEEEEeCC
Confidence 9999999999976 6778888999999999999999999999999999999999988766655443
No 58
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.1e-24 Score=164.74 Aligned_cols=166 Identities=11% Similarity=0.176 Sum_probs=129.5
Q ss_pred eee-cCCCcceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----
Q psy13207 19 SNL-VDSRTSVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI---- 92 (197)
Q Consensus 19 ~~~-~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 92 (197)
..+ .+|.++|++++|+| + +.+|++|+.||+|++||+.+......+.....+.+...|.+++|+|++..++++
T Consensus 56 ~~~~~~h~~~V~~~~~s~~~--~~~l~s~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~s~dg 133 (437)
T 3gre_A 56 ATLMENEPNSITSSAVSPGE--TPYLITGSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPNFDAFAVSSKDG 133 (437)
T ss_dssp EEECTTTTSCEEEEEEECSS--SCEEEEEETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTTSSEEEEEETTS
T ss_pred eeeccCCCCceEEEEECCCC--CCEEEEecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCCCCEEEEEeCCC
Confidence 456 88999999999999 8 999999999999999998763221112222233457899999999999988765
Q ss_pred -eEEEEeeEe---------c---------cc--CCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeee
Q psy13207 93 -SIMYEAHSI---------N---------AE--HKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF 149 (197)
Q Consensus 93 -~~~~~~~~~---------~---------~~--~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 149 (197)
+++|++... . .. +...+.++.+. ++.-+|++++.|+.|++||+++ .+.+..+
T Consensus 134 ~i~vwd~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~-----~~~~~~~ 208 (437)
T 3gre_A 134 QIIVLKVNHYQQESEVKFLNCECIRKINLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRT-----LERLQII 208 (437)
T ss_dssp EEEEEEEEEEEETTEEEEEEEEEEEEEEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTT-----CCEEEEE
T ss_pred EEEEEEeccccCCceeeccccceeEEEEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCC-----CeeeEEE
Confidence 799984211 0 01 45667777744 4444559999999999999987 6677777
Q ss_pred cC--ceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 150 ED--HYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 150 ~~--h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
.+ |...|.+++|+|++++|++|+.||.|++||+++++....+
T Consensus 209 ~~~~h~~~v~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~ 252 (437)
T 3gre_A 209 ENSPRHGAVSSICIDEECCVLILGTTRGIIDIWDIRFNVLIRSW 252 (437)
T ss_dssp ECCGGGCCEEEEEECTTSCEEEEEETTSCEEEEETTTTEEEEEE
T ss_pred ccCCCCCceEEEEECCCCCEEEEEcCCCeEEEEEcCCccEEEEE
Confidence 77 8899999999999999999999999999999987665543
No 59
>4aow_A Guanine nucleotide-binding protein subunit beta-2; receptor, WD-repeat, beta-propeller; 2.45A {Homo sapiens} PDB: 2zkq_a
Probab=99.93 E-value=3.2e-24 Score=158.24 Aligned_cols=172 Identities=14% Similarity=0.205 Sum_probs=130.3
Q ss_pred cccccccceeeee------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 6 LQSEKCLNQWTRR------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
+..|+.+++|+.. ..+.+|...+.+++|+++....++++++.|+.|++||+.+.+....+. .+...|.+
T Consensus 146 ~s~d~~~~~~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~s~~~d~~i~i~d~~~~~~~~~~~-----~h~~~v~~ 220 (340)
T 4aow_A 146 GSRDKTIKLWNTLGVCKYTVQDESHSEWVSCVRFSPNSSNPIIVSCGWDKLVKVWNLANCKLKTNHI-----GHTGYLNT 220 (340)
T ss_dssp EETTSCEEEECTTSCEEEEECSSSCSSCEEEEEECSCSSSCEEEEEETTSCEEEEETTTTEEEEEEC-----CCSSCEEE
T ss_pred ecCCCeEEEEEeCCCceEEEEeccccCcccceEEccCCCCcEEEEEcCCCEEEEEECCCCceeeEec-----CCCCcEEE
Confidence 3567888888753 235689999999999987435678999999999999998876443221 23678999
Q ss_pred EEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccc----e
Q psy13207 80 LTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFD----I 143 (197)
Q Consensus 80 ~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~----~ 143 (197)
++|+|++++++++ +++|| +..+. +...+.+++|+ ...+ ++++.|+.|++||+++..... .
T Consensus 221 ~~~s~~~~~l~s~s~Dg~i~iwd~~~~~~~~~~~--~~~~v~~~~~~~~~~~--~~~~~d~~i~iwd~~~~~~~~~~~~~ 296 (340)
T 4aow_A 221 VTVSPDGSLCASGGKDGQAMLWDLNEGKHLYTLD--GGDIINALCFSPNRYW--LCAATGPSIKIWDLEGKIIVDELKQE 296 (340)
T ss_dssp EEECTTSSEEEEEETTCEEEEEETTTTEEEEEEE--CSSCEEEEEECSSSSE--EEEEETTEEEEEETTTTEEEEEECCC
T ss_pred EEECCCCCEEEEEeCCCeEEEEEeccCceeeeec--CCceEEeeecCCCCce--eeccCCCEEEEEECCCCeEEEecccc
Confidence 9999999998765 79999 44444 55689999999 4556 788889999999997621110 0
Q ss_pred eeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 144 ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 144 ~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
.......+|...|++++|+|+|++|++|+.||.|++||++++.
T Consensus 297 ~~~~~~~~h~~~v~~l~~s~dg~~l~sgs~Dg~v~iW~~~tGt 339 (340)
T 4aow_A 297 VISTSSKAEPPQCTSLAWSADGQTLFAGYTDNLVRVWQVTIGT 339 (340)
T ss_dssp -------CCCCCEEEEEECTTSSEEEEEETTSCEEEEEEEC--
T ss_pred ceeeeccCCCCCEEEEEECCCCCEEEEEeCCCEEEEEeCCCcC
Confidence 1112345688999999999999999999999999999999875
No 60
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.93 E-value=5e-24 Score=160.49 Aligned_cols=168 Identities=16% Similarity=0.210 Sum_probs=136.9
Q ss_pred ccccccceeeeee----------------ee-------cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccccc
Q psy13207 7 QSEKCLNQWTRRS----------------NL-------VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLS 63 (197)
Q Consensus 7 ~~~~~~~~w~~~~----------------~~-------~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~ 63 (197)
..++.+++|++.. .+ ..|...|.+++|+|+ + +|++++.||.|++||+++.+.+.
T Consensus 145 ~~dg~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~--~-~l~~~~~dg~i~i~d~~~~~~~~ 221 (397)
T 1sq9_A 145 DVKGTTYIWKFHPFADESNSLTLNWSPTLELQGTVESPMTPSQFATSVDISER--G-LIATGFNNGTVQISELSTLRPLY 221 (397)
T ss_dssp ETTSCEEEEEEESSSSHHHHTTTCCCCEEEEEEEECCSSSSCCCCCEEEECTT--S-EEEEECTTSEEEEEETTTTEEEE
T ss_pred eCCCcEEEEeCCccccccccceeeccCcceeeeeeccccCCCCCceEEEECCC--c-eEEEEeCCCcEEEEECCCCceeE
Confidence 4578889998876 55 448899999999998 8 99999999999999999876543
Q ss_pred ceeccceecc---CCCeeeEEEccCCCcccc--------eeEEEE------eeEeccc-------------CCCceeEEE
Q psy13207 64 QWCLQHEVAC---PTLASCLTWNHSFSRFNS--------ISIMYE------AHSINAE-------------HKDLIHDVA 113 (197)
Q Consensus 64 ~~~~~~~~~~---~~~~~~~~~~~~~~~~~~--------~~~~~~------~~~~~~~-------------~~~~i~~~~ 113 (197)
.+... ..+ ...+.+++|+|++.++++ .+++|| +..+. . |...|.+++
T Consensus 222 ~~~~~--~~h~~~~~~i~~i~~~~~~~~l~~~~~d~~~g~i~i~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~v~~~~ 298 (397)
T 1sq9_A 222 NFESQ--HSMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYETEFGERIGSLS-VPTHSSQASLGEFAHSSWVMSLS 298 (397)
T ss_dssp EEECC--C---CCCCCEEEEEECSSTTEEEEEEEETTEEEEEEEETTTCCEEEEEC-BC--------CCBSBSSCEEEEE
T ss_pred EEecc--ccccccCCccceEEECCCCCEEEEEecCCCCceEEEEECCCCcccceec-cCcccccccccccccCCcEEEEE
Confidence 33310 002 568999999999998754 378999 55666 6 899999999
Q ss_pred EcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec------Cc---------------eecEEEEEEccCC-------
Q psy13207 114 YDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE------DH---------------YCTVWRVSWNITG------- 165 (197)
Q Consensus 114 ~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~------~h---------------~~~v~~~~~~p~~------- 165 (197)
|+++.-+|++++.|+.|++||+++ .+.+..+. +| ...|.+++|+|++
T Consensus 299 ~~~~~~~l~~~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~v~~~~~~~~g~~~~~~~ 373 (397)
T 1sq9_A 299 FNDSGETLCSAGWDGKLRFWDVKT-----KERITTLNMHCDDIEIEEDILAVDEHGDSLAEPGVFDVKFLKKGWRSGMGA 373 (397)
T ss_dssp ECSSSSEEEEEETTSEEEEEETTT-----TEEEEEEECCGGGCSSGGGCCCBCTTSCBCSSCCEEEEEEECTTTSBSTTC
T ss_pred ECCCCCEEEEEeCCCeEEEEEcCC-----CceeEEEecccCcccchhhhhccccccccccCCceeEEEeccccccccccc
Confidence 994444449999999999999976 56677777 77 8999999999998
Q ss_pred ---CEEEEEeCCCcEEEEEcCCC
Q psy13207 166 ---TIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 166 ---~~l~~~~~dg~i~iw~~~~~ 185 (197)
++|++++.||.|++|+++++
T Consensus 374 ~~~~~l~s~~~dg~i~iw~~~~g 396 (397)
T 1sq9_A 374 DLNESLCCVCLDRSIRWFREAGG 396 (397)
T ss_dssp TTSCEEEEEETTTEEEEEEEEC-
T ss_pred cccceEEEecCCCcEEEEEcCCC
Confidence 79999999999999999875
No 61
>3dm0_A Maltose-binding periplasmic protein fused with RACK1; MBP RACK1A, receptor for activiated protein C-kinase 1, beta-propeller WD40 repeat; HET: GLC; 2.40A {Escherichia coli}
Probab=99.93 E-value=2.2e-24 Score=173.63 Aligned_cols=174 Identities=12% Similarity=0.105 Sum_probs=133.5
Q ss_pred eeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEEccCCCcccce-
Q psy13207 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTWNHSFSRFNSI- 92 (197)
Q Consensus 15 w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~- 92 (197)
..+...+.+|.+.|++++|+|++ +++|+||+.|++|++|++.......... ...+. +...|.+++|+|++++++++
T Consensus 372 l~~~~~l~~H~~~V~~v~~~~~~-~~~l~s~s~D~~i~~W~~~~~~~~~~~~-~~~~~~h~~~v~~v~~s~~g~~l~sgs 449 (694)
T 3dm0_A 372 LVLKGTMRAHTDMVTAIATPIDN-ADIIVSASRDKSIILWKLTKDDKAYGVA-QRRLTGHSHFVEDVVLSSDGQFALSGS 449 (694)
T ss_dssp SEEEEEEECCSSCEEEEECCTTC-CSEEEEEETTSEEEEEECCCSTTCSCEE-EEEEECCSSCEEEEEECTTSSEEEEEE
T ss_pred cchhhhcccCCceeEEEEecCCC-CCEEEEEeCCCcEEEEEccCCCcccccc-cceecCCCCcEEEEEECCCCCEEEEEe
Confidence 34556789999999999999962 5799999999999999997654321111 12222 36789999999999998776
Q ss_pred ----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEc
Q psy13207 93 ----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWN 162 (197)
Q Consensus 93 ----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~ 162 (197)
+++|| +..+. +|...|.+++|+++.-+|++|+.|+.|++||..... .........+|...|.+++|+
T Consensus 450 ~Dg~v~vwd~~~~~~~~~~~-~h~~~v~~~~~s~~~~~l~s~s~D~~i~iwd~~~~~--~~~~~~~~~~h~~~v~~~~~~ 526 (694)
T 3dm0_A 450 WDGELRLWDLAAGVSTRRFV-GHTKDVLSVAFSLDNRQIVSASRDRTIKLWNTLGEC--KYTISEGGEGHRDWVSCVRFS 526 (694)
T ss_dssp TTSEEEEEETTTTEEEEEEE-CCSSCEEEEEECTTSSCEEEEETTSCEEEECTTSCE--EEEECSSTTSCSSCEEEEEEC
T ss_pred CCCcEEEEECCCCcceeEEe-CCCCCEEEEEEeCCCCEEEEEeCCCEEEEEECCCCc--ceeeccCCCCCCCcEEEEEEe
Confidence 89999 56677 899999999999433333999999999999986410 011112235788999999999
Q ss_pred cCC--CEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 163 ITG--TIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 163 p~~--~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
|++ .+|++++.|++|++||+++.+....+..
T Consensus 527 ~~~~~~~l~s~s~d~~v~vwd~~~~~~~~~~~~ 559 (694)
T 3dm0_A 527 PNTLQPTIVSASWDKTVKVWNLSNCKLRSTLAG 559 (694)
T ss_dssp SCSSSCEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred CCCCcceEEEEeCCCeEEEEECCCCcEEEEEcC
Confidence 986 6899999999999999988765554443
No 62
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.93 E-value=4.1e-24 Score=158.89 Aligned_cols=167 Identities=14% Similarity=0.182 Sum_probs=131.9
Q ss_pred eecCCCcceeEEEECCC--CCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccC----CCcccce-
Q psy13207 20 NLVDSRTSVTDVKFGPK--QLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHS----FSRFNSI- 92 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~--~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~- 92 (197)
...+|.++|.+++|+|+ .....+++++.++.|++||+.+++.+..+.......+...+.+++|+|+ +.+++++
T Consensus 13 ~~~~h~~~v~~i~~~p~~~~~~~~~~~~~~~~~v~vw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~~~l~~~~ 92 (366)
T 3k26_A 13 LKEDHNQPLFGVQFNWHSKEGDPLVFATVGSNRVTLYECHSQGEIRLLQSYVDADADENFYTCAWTYDSNTSHPLLAVAG 92 (366)
T ss_dssp EECTTCSCEEEEEECTTCCTTSCEEEEEEETTEEEEEEECGGGCEEEEEEEECSCTTCCEEEEEEEECTTTCCEEEEEEE
T ss_pred eecCCCCceEEEEEecccCCCCceEEEECCCCEEEEEEcCCCcEEEeeeeccccCCCCcEEEEEeccCCCCCCCEEEEec
Confidence 35589999999999983 0144566666677999999998766544442222224678999999999 5567655
Q ss_pred ----eEEEE------eeEecccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEccCCcccceeeeeee---cCceecEEE
Q psy13207 93 ----SIMYE------AHSINAEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF---EDHYCTVWR 158 (197)
Q Consensus 93 ----~~~~~------~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~---~~h~~~v~~ 158 (197)
+++|+ +..+. +|...|.+++|++ +.-+|++++.|+.|++||+++ .+.+..+ .+|...|.+
T Consensus 93 ~dg~i~v~d~~~~~~~~~~~-~~~~~i~~~~~~~~~~~~l~s~~~dg~i~iwd~~~-----~~~~~~~~~~~~~~~~v~~ 166 (366)
T 3k26_A 93 SRGIIRIINPITMQCIKHYV-GHGNAINELKFHPRDPNLLLSVSKDHALRLWNIQT-----DTLVAIFGGVEGHRDEVLS 166 (366)
T ss_dssp TTCEEEEECTTTCCEEEEEE-SCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTT-----TEEEEEECSTTSCSSCEEE
T ss_pred CCCEEEEEEchhceEeeeec-CCCCcEEEEEECCCCCCEEEEEeCCCeEEEEEeec-----CeEEEEecccccccCceeE
Confidence 89999 56677 8999999999995 444459999999999999976 4556665 689999999
Q ss_pred EEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 159 VSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 159 ~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
++|+|++++|++++.||.|++||+++.+....+.
T Consensus 167 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~ 200 (366)
T 3k26_A 167 ADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIK 200 (366)
T ss_dssp EEECTTSSEEEEEETTSCEEEEESCSHHHHHHHH
T ss_pred EEECCCCCEEEEecCCCCEEEEECCCCccccccc
Confidence 9999999999999999999999999876555444
No 63
>3dw8_B Serine/threonine-protein phosphatase 2A 55 kDa RE subunit B alpha isoform; holoenzyme, PR55, WD repeat, hydrolase, iron, manganese binding, methylation, phosphoprotein, protein phosphatase; HET: 1ZN; 2.85A {Homo sapiens}
Probab=99.93 E-value=1.7e-24 Score=165.31 Aligned_cols=182 Identities=10% Similarity=0.161 Sum_probs=136.2
Q ss_pred cccccccceeeee----------------eeecCCC------------cceeEEEECCCCCC--cEEEEEeCCCcEEEEE
Q psy13207 6 LQSEKCLNQWTRR----------------SNLVDSR------------TSVTDVKFGPKQLG--LVLATCAADGLVRIYE 55 (197)
Q Consensus 6 ~~~~~~~~~w~~~----------------~~~~~h~------------~~v~~~~~~~~~~~--~~l~s~~~dg~v~iw~ 55 (197)
+..|+.+++|++. ..+.+|. .+|.+++|+|+ + ..|++++.|++|++|+
T Consensus 46 g~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~h~~~~~~~~~~~~~~~V~~l~~~~~--~~~~~l~s~s~d~~i~iw~ 123 (447)
T 3dw8_B 46 GDKGGRVVIFQQEQENKIQSHSRGEYNVYSTFQSHEPEFDYLKSLEIEEKINKIRWLPQ--KNAAQFLLSTNDKTIKLWK 123 (447)
T ss_dssp EETTSEEEEEEECC-----CCCCCCEEEEEEEECCCCEEEGGGTEEECCCCCEEEECCC--CSSSEEEEEECSSCEEEEE
T ss_pred EcCCCeEEEEEecCCCCCCcccccceeEecccccccccccccccccccCceEEEEEcCC--CCcceEEEeCCCCeEEEEe
Confidence 4568889999853 4677898 88999999998 6 7899999999999999
Q ss_pred cCCcccccc-------------------ee--------------ccce--eccCCCeeeEEEccCCCcccce----eEEE
Q psy13207 56 APDVMNLSQ-------------------WC--------------LQHE--VACPTLASCLTWNHSFSRFNSI----SIMY 96 (197)
Q Consensus 56 ~~~~~~~~~-------------------~~--------------~~~~--~~~~~~~~~~~~~~~~~~~~~~----~~~~ 96 (197)
+.+...... +. .... ..+...|.+++|+|+++.++++ +++|
T Consensus 124 ~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~~~l~s~~d~~i~iw 203 (447)
T 3dw8_B 124 ISERDKRPEGYNLKEEDGRYRDPTTVTTLRVPVFRPMDLMVEASPRRIFANAHTYHINSISINSDYETYLSADDLRINLW 203 (447)
T ss_dssp EEEEEEEEECCSCC--------CCCCCSCCCCEEEEEEEEEEEEEEEEECSCCSSCCCEEEECTTSSEEEEECSSEEEEE
T ss_pred cccccCCcceecccCccccccCcccccceEeccccchheeeeccceEEeccCCCcceEEEEEcCCCCEEEEeCCCeEEEE
Confidence 876432100 00 0001 1236789999999999998776 8999
Q ss_pred Eee--------------EecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEccCCcccceeeeeeecCcee-------
Q psy13207 97 EAH--------------SINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC------- 154 (197)
Q Consensus 97 ~~~--------------~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~------- 154 (197)
|+. .+. .|...|.+++|+++. -+|++|+.|+.|++||+++.... ...+..+.+|..
T Consensus 204 d~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~p~~~~~l~s~~~dg~i~iwd~~~~~~~-~~~~~~~~~~~~~~~~~~~ 281 (447)
T 3dw8_B 204 HLEITDRSFNIVDIKPANME-ELTEVITAAEFHPNSCNTFVYSSSKGTIRLCDMRASALC-DRHSKLFEEPEDPSNRSFF 281 (447)
T ss_dssp ETTEEEEEEEEEECCCSSGG-GCCCCEEEEEECSSCTTEEEEEETTSCEEEEETTTCSSS-CTTCEEECCC-----CCHH
T ss_pred ECCCCCceeeeeeccccccc-ccCcceEEEEECCCCCcEEEEEeCCCeEEEEECcCCccc-cceeeEeccCCCccccccc
Confidence 922 234 789999999999543 33499999999999999863210 111566777765
Q ss_pred -----cEEEEEEccCCCEEEEEeCCCcEEEEEcCC-Ccchhhhh
Q psy13207 155 -----TVWRVSWNITGTIVASSGDDGCVRLWKLKK-KRKKKKEE 192 (197)
Q Consensus 155 -----~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~-~~~~~~~~ 192 (197)
.|.+++|+|+|++|++++. +.|++||+++ ++....+.
T Consensus 282 ~~~~~~v~~~~~s~~g~~l~~~~~-~~v~iwd~~~~~~~~~~~~ 324 (447)
T 3dw8_B 282 SEIISSISDVKFSHSGRYMMTRDY-LSVKVWDLNMENRPVETYQ 324 (447)
T ss_dssp HHHTTCEEEEEECTTSSEEEEEES-SEEEEEETTCCSSCSCCEE
T ss_pred cccCceEEEEEECCCCCEEEEeeC-CeEEEEeCCCCccccceee
Confidence 8999999999999999998 9999999987 55554443
No 64
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.93 E-value=6.4e-24 Score=157.92 Aligned_cols=173 Identities=13% Similarity=0.127 Sum_probs=140.5
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..++.+++|+.. ..+.+|...|.+++|+|+ +++|++++.||.|++||+.+++.+..+. ....+.++
T Consensus 50 ~~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~------~~~~v~~~ 121 (369)
T 3zwl_B 50 CSKDSSASVWYSLNGERLGTLDGHTGTIWSIDVDCF--TKYCVTGSADYSIKLWDVSNGQCVATWK------SPVPVKRV 121 (369)
T ss_dssp EESSSCEEEEETTTCCEEEEECCCSSCEEEEEECTT--SSEEEEEETTTEEEEEETTTCCEEEEEE------CSSCEEEE
T ss_pred EeCCCEEEEEeCCCchhhhhhhhcCCcEEEEEEcCC--CCEEEEEeCCCeEEEEECCCCcEEEEee------cCCCeEEE
Confidence 3568899999753 468899999999999998 9999999999999999999876544332 46789999
Q ss_pred EEccCCCcccc----------eeEEEEee-----------------EecccCCC--ceeEEEEcCCCeEEEEeeCCCeEE
Q psy13207 81 TWNHSFSRFNS----------ISIMYEAH-----------------SINAEHKD--LIHDVAYDYYGLRMATCSSDQNIK 131 (197)
Q Consensus 81 ~~~~~~~~~~~----------~~~~~~~~-----------------~~~~~~~~--~i~~~~~~~~~~~~~s~~~d~~i~ 131 (197)
+|+|++.++++ .+.+|++. .+. .|.. .+.+++|+++.-.|++++.|+.|+
T Consensus 122 ~~~~~~~~l~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~l~~~~~dg~i~ 200 (369)
T 3zwl_B 122 EFSPCGNYFLAILDNVMKNPGSINIYEIERDSATHELTKVSEEPIHKII-THEGLDAATVAGWSTKGKYIIAGHKDGKIS 200 (369)
T ss_dssp EECTTSSEEEEEECCBTTBCCEEEEEEEEECTTTCCEEEECSSCSEEEE-CCTTCCCEEEEEECGGGCEEEEEETTSEEE
T ss_pred EEccCCCEEEEecCCccCCCCEEEEEEecCCccceeecccccceeeecc-CCcCccceeEEEEcCCCCEEEEEcCCCEEE
Confidence 99999998764 47889822 222 3444 899999994433349999999999
Q ss_pred EEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 132 VTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 132 ~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
+||+++. ...+..+..|...|.+++|+|++++|++++.||.|++||+++.+....+
T Consensus 201 i~d~~~~----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~ 256 (369)
T 3zwl_B 201 KYDVSNN----YEYVDSIDLHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKY 256 (369)
T ss_dssp EEETTTT----TEEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE
T ss_pred EEECCCC----cEeEEEEecCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeee
Confidence 9999752 4567778889999999999999999999999999999999987655443
No 65
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.93 E-value=5.6e-24 Score=162.03 Aligned_cols=177 Identities=15% Similarity=0.237 Sum_probs=134.5
Q ss_pred cccccccceeeee------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 6 LQSEKCLNQWTRR------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
+..++.++.|+.. ..+.+|...+..+.|+|+ +.++++++.|+.+++|+..+++..... +.....+...|.+
T Consensus 205 gs~d~~i~~~d~~~~~~~~~~~~~h~~~~~~~~~~~~--g~~l~s~~~D~~v~i~~~~~~~~~~~~-~~~~~~~~~~V~~ 281 (420)
T 4gga_A 205 GSRSGHIHHHDVRVAEHHVATLSGHSQEVCGLRWAPD--GRHLASGGNDNLVNVWPSAPGEGGWVP-LQTFTQHQGAVKA 281 (420)
T ss_dssp EETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEESSCCSSCSCC-SEEECCCSSCEEE
T ss_pred EeCCCceeEeeecccceeeEEecccccceeeeeecCC--CCeeeeeeccccceEEeecccccccee-eeeecccCCceee
Confidence 4556677777643 357899999999999999 999999999999999999876533211 1122223678999
Q ss_pred EEEccCCCccc-c-------eeEEEE------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccce
Q psy13207 80 LTWNHSFSRFN-S-------ISIMYE------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDI 143 (197)
Q Consensus 80 ~~~~~~~~~~~-~-------~~~~~~------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~ 143 (197)
++|+|.+..+. + .+++|| +..+. +...+.++.|+ ++.+..++|+.|+.|++||.++ .
T Consensus 282 ~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~~--~~~~v~~~~~~~~~~~lv~~sg~~d~~I~iwd~~~-----~ 354 (420)
T 4gga_A 282 VAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAVD--AHSQVCSILWSPHYKELISGHGFAQNQLVIWKYPT-----M 354 (420)
T ss_dssp EEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEEE--CSSCEEEEEEETTTTEEEEEECTTTCCEEEEETTT-----C
T ss_pred eeeCCCcccEEEEEeecCCCEEEEEeCCccccceeec--cccceeeeeecCCCCeEEEEEecCCCEEEEEECCC-----C
Confidence 99999877653 2 289999 33343 45678888888 4555223345799999999987 7
Q ss_pred eeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 144 ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 144 ~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
+++..+.+|...|.+++|+|+|++|++|+.|++|++||+......+..+
T Consensus 355 ~~v~~l~gH~~~V~~l~~spdg~~l~S~s~D~tvriWdv~~~~~~~~~~ 403 (420)
T 4gga_A 355 AKVAELKGHTSRVLSLTMSPDGATVASAAADETLRLWRCFELDPARRRE 403 (420)
T ss_dssp CEEEEECCCSSCEEEEEECTTSSCEEEEETTTEEEEECCSCSSCC----
T ss_pred cEEEEEcCCCCCEEEEEEcCCCCEEEEEecCCeEEEEECCCCCccchhh
Confidence 7888999999999999999999999999999999999998765544443
No 66
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.93 E-value=9.2e-24 Score=155.37 Aligned_cols=160 Identities=16% Similarity=0.117 Sum_probs=131.9
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEE
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIM 95 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 95 (197)
..+|..+|.+++|+|+ +++|++++ ||.|++|++.+..............+...+.+++|+|+++.++++ +++
T Consensus 47 ~~~h~~~v~~~~~~~~--~~~l~~~~-dg~i~iw~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~~ 123 (337)
T 1gxr_A 47 TLNHGEVVCAVTISNP--TRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLPDGCTLIVGGEASTLSI 123 (337)
T ss_dssp EECCSSCCCEEEECSS--SSEEEEEC-BSEEEEEETTSTTCCSCSEEEECSCTTSBEEEEEECTTSSEEEEEESSSEEEE
T ss_pred eccCCCceEEEEEecC--CcEEEEcC-CCeEEEEECCCCCceeeeecccccCCCCcEEEEEEcCCCCEEEEEcCCCcEEE
Confidence 3479999999999998 99999999 999999999877544333322222346789999999999988765 799
Q ss_pred EE--------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCE
Q psy13207 96 YE--------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTI 167 (197)
Q Consensus 96 ~~--------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 167 (197)
|+ ...+. .|...+.+++|+++.-++++++.|+.|++||+++ .+.+..+..|...|.+++|+|++++
T Consensus 124 ~d~~~~~~~~~~~~~-~~~~~i~~~~~~~~~~~l~~~~~dg~v~~~d~~~-----~~~~~~~~~~~~~i~~~~~~~~~~~ 197 (337)
T 1gxr_A 124 WDLAAPTPRIKAELT-SSAPACYALAISPDSKVCFSCCSDGNIAVWDLHN-----QTLVRQFQGHTDGASCIDISNDGTK 197 (337)
T ss_dssp EECCCC--EEEEEEE-CSSSCEEEEEECTTSSEEEEEETTSCEEEEETTT-----TEEEEEECCCSSCEEEEEECTTSSE
T ss_pred EECCCCCcceeeecc-cCCCceEEEEECCCCCEEEEEeCCCcEEEEeCCC-----CceeeeeecccCceEEEEECCCCCE
Confidence 99 33445 7888999999995443449999999999999976 6777788889999999999999999
Q ss_pred EEEEeCCCcEEEEEcCCCcchh
Q psy13207 168 VASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 168 l~~~~~dg~i~iw~~~~~~~~~ 189 (197)
|++++.||.|++||+++++...
T Consensus 198 l~~~~~dg~i~~~d~~~~~~~~ 219 (337)
T 1gxr_A 198 LWTGGLDNTVRSWDLREGRQLQ 219 (337)
T ss_dssp EEEEETTSEEEEEETTTTEEEE
T ss_pred EEEEecCCcEEEEECCCCceEe
Confidence 9999999999999998876543
No 67
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.93 E-value=2.7e-24 Score=159.67 Aligned_cols=171 Identities=11% Similarity=-0.006 Sum_probs=125.6
Q ss_pred cccccccceeeee---------------eeecCCCcceeEEEECC--CCCCcEEEEEeCCCcEEEEEcCCcccccceecc
Q psy13207 6 LQSEKCLNQWTRR---------------SNLVDSRTSVTDVKFGP--KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQ 68 (197)
Q Consensus 6 ~~~~~~~~~w~~~---------------~~~~~h~~~v~~~~~~~--~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~ 68 (197)
+..|+++++|+.. ....+|.++|.+++|+| + +++|++++.||+|++||+++++......
T Consensus 91 ~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~l~s~s~dg~i~~wd~~~~~~~~~~~-- 166 (343)
T 3lrv_A 91 RGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSANEIIYMYGHNEVN--TEYFIWADNRGTIGFQSYEDDSQYIVHS-- 166 (343)
T ss_dssp ECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSSCEEEEECCC-----CCEEEEEETTCCEEEEESSSSCEEEEEC--
T ss_pred ecCCCeEEEEEccCceEEeecCCcceeEEeecCCCCCEEEEEcCCCCC--CCEEEEEeCCCcEEEEECCCCcEEEEEe--
Confidence 4567888888533 12236778999999999 8 9999999999999999999876532111
Q ss_pred ceeccCCCeeeEEEccCCCcccce-----eEEEE------e-eEeccc-CCCceeEEEEcCCCeEEEEeeCCCeEEEEEc
Q psy13207 69 HEVACPTLASCLTWNHSFSRFNSI-----SIMYE------A-HSINAE-HKDLIHDVAYDYYGLRMATCSSDQNIKVTRD 135 (197)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~-~~~~~~-~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~ 135 (197)
......+.+++|+|++.+++++ +++|| + ..+. . |...|.+++|+++..+|++++ |+.|++||+
T Consensus 167 --~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~~~~~~~~~~-~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~ 242 (343)
T 3lrv_A 167 --AKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSSPDQASSRFP-VDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDL 242 (343)
T ss_dssp --CCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSCTTSCCEECC-CCTTSCEEEEEECTTSSEEEEEE-SSBEEEEET
T ss_pred --cCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCCCCccEEe-ccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEc
Confidence 1124579999999999999875 89999 3 5677 6 999999999995555558888 559999999
Q ss_pred cCCcccceeeeeeecCceecEE--EEEEccCCCEEEEEeC-CCcEEEEEcCCCc
Q psy13207 136 VMGTRFDIETIGNFEDHYCTVW--RVSWNITGTIVASSGD-DGCVRLWKLKKKR 186 (197)
Q Consensus 136 ~~~~~~~~~~~~~~~~h~~~v~--~~~~~p~~~~l~~~~~-dg~i~iw~~~~~~ 186 (197)
++.... ..+..+..|...+. +++|+|+|++|++++. |+.+++|++.+..
T Consensus 243 ~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~g~~l~~~s~~d~~i~v~~~~~~~ 294 (343)
T 3lrv_A 243 RKDVGT--LAYPTYTIPEFKTGTVTYDIDDSGKNMIAYSNESNSLTIYKFDKKT 294 (343)
T ss_dssp TSSTTC--BSSCCCBC-----CCEEEEECTTSSEEEEEETTTTEEEEEEECTTT
T ss_pred CCCCcc--eeecccccccccccceEEEECCCCCEEEEecCCCCcEEEEEEcccc
Confidence 873211 11222223444443 6999999999999998 9999999996543
No 68
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.93 E-value=4e-24 Score=161.81 Aligned_cols=171 Identities=15% Similarity=0.173 Sum_probs=141.2
Q ss_pred ccccccceeee----eeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccc-------------
Q psy13207 7 QSEKCLNQWTR----RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQH------------- 69 (197)
Q Consensus 7 ~~~~~~~~w~~----~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~------------- 69 (197)
..++.+++|+. ...+.+|..+|.+++|+|+ +++|++++.||.|++||+.+++.+..+....
T Consensus 127 ~~dg~i~i~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~~~~ 204 (425)
T 1r5m_A 127 VENGELRLWNKTGALLNVLNFHRAPIVSVKWNKD--GTHIISMDVENVTILWNVISGTVMQHFELKETGGSSINAENHSG 204 (425)
T ss_dssp ETTSCEEEEETTSCEEEEECCCCSCEEEEEECTT--SSEEEEEETTCCEEEEETTTTEEEEEECCC--------------
T ss_pred eCCCeEEEEeCCCCeeeeccCCCccEEEEEECCC--CCEEEEEecCCeEEEEECCCCcEEEEeeccccCccceeeccccC
Confidence 46788999973 3457889999999999998 9999999999999999998765443222111
Q ss_pred -------------------------------------eec-cCCCeeeEEEccCCCcccce-----eEEEE------eeE
Q psy13207 70 -------------------------------------EVA-CPTLASCLTWNHSFSRFNSI-----SIMYE------AHS 100 (197)
Q Consensus 70 -------------------------------------~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~ 100 (197)
.+. +...+.+++|+|++++++++ +++|+ +..
T Consensus 205 ~~~~~~~~~~~~~~~~~~~~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~ 284 (425)
T 1r5m_A 205 DGSLGVDVEWVDDDKFVIPGPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDTNKLLLSASDDGTLRIWHGGNGNSQNC 284 (425)
T ss_dssp -CCCBSCCEEEETTEEEEECGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETTTTEEEEEETTSCEEEECSSSBSCSEE
T ss_pred CcceeeEEEEcCCCEEEEEcCCCeEEEEEcCCCceeeeeccCCCceEEEEECCCCCEEEEEcCCCEEEEEECCCCccceE
Confidence 111 25678999999999988765 79999 556
Q ss_pred ecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEE
Q psy13207 101 INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180 (197)
Q Consensus 101 ~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw 180 (197)
+. .|...|.+++|+++. ++++++.|+.|++||+++ ...+..+..|...|.+++|+|++++|++++.||.|++|
T Consensus 285 ~~-~~~~~i~~~~~~~~~-~l~~~~~d~~i~i~d~~~-----~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~ 357 (425)
T 1r5m_A 285 FY-GHSQSIVSASWVGDD-KVISCSMDGSVRLWSLKQ-----NTLLALSIVDGVPIFAGRISQDGQKYAVAFMDGQVNVY 357 (425)
T ss_dssp EC-CCSSCEEEEEEETTT-EEEEEETTSEEEEEETTT-----TEEEEEEECTTCCEEEEEECTTSSEEEEEETTSCEEEE
T ss_pred ec-CCCccEEEEEECCCC-EEEEEeCCCcEEEEECCC-----CcEeEecccCCccEEEEEEcCCCCEEEEEECCCeEEEE
Confidence 66 799999999999554 559999999999999976 66777888899999999999999999999999999999
Q ss_pred EcCCCc
Q psy13207 181 KLKKKR 186 (197)
Q Consensus 181 ~~~~~~ 186 (197)
|+++..
T Consensus 358 ~~~~~~ 363 (425)
T 1r5m_A 358 DLKKLN 363 (425)
T ss_dssp ECHHHH
T ss_pred ECCCCc
Confidence 998755
No 69
>3k26_A Polycomb protein EED; WD40, structural genomics, NPPSFA, national project on prote structural and functional analysis, structural genomics CON SGC; HET: M3L; 1.58A {Homo sapiens} PDB: 3jzn_A* 3k27_A* 3jpx_A* 3jzg_A* 3jzh_A* 3iiw_A* 3ijc_A* 3iiy_A* 3ij0_A* 3ij1_A* 2qxv_A
Probab=99.93 E-value=4.1e-25 Score=164.31 Aligned_cols=177 Identities=13% Similarity=0.209 Sum_probs=142.0
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
+..++.+++|++. ..+.+|..+|.+++|+| + +.+|++++.||.|++||+++++.+..+.. ...+...+.+
T Consensus 91 ~~~dg~i~v~d~~~~~~~~~~~~~~~~i~~~~~~~~~--~~~l~s~~~dg~i~iwd~~~~~~~~~~~~--~~~~~~~v~~ 166 (366)
T 3k26_A 91 AGSRGIIRIINPITMQCIKHYVGHGNAINELKFHPRD--PNLLLSVSKDHALRLWNIQTDTLVAIFGG--VEGHRDEVLS 166 (366)
T ss_dssp EETTCEEEEECTTTCCEEEEEESCCSCEEEEEECSSC--TTEEEEEETTSCEEEEETTTTEEEEEECS--TTSCSSCEEE
T ss_pred ecCCCEEEEEEchhceEeeeecCCCCcEEEEEECCCC--CCEEEEEeCCCeEEEEEeecCeEEEEecc--cccccCceeE
Confidence 4567889999754 45788999999999999 7 89999999999999999988765433210 0123678999
Q ss_pred EEEccCCCcccce-----eEEEEeeE------ec---------------------------ccCCCceeEEEEcCCCeEE
Q psy13207 80 LTWNHSFSRFNSI-----SIMYEAHS------IN---------------------------AEHKDLIHDVAYDYYGLRM 121 (197)
Q Consensus 80 ~~~~~~~~~~~~~-----~~~~~~~~------~~---------------------------~~~~~~i~~~~~~~~~~~~ 121 (197)
++|+|++.+++++ +++|++.. +. ..|...|.+++|+++.+
T Consensus 167 ~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l-- 244 (366)
T 3k26_A 167 ADYDLLGEKIMSCGMDHSLKLWRINSKRMMNAIKESYDYNPNKTNRPFISQKIHFPDFSTRDIHRNYVDCVRWLGDLI-- 244 (366)
T ss_dssp EEECTTSSEEEEEETTSCEEEEESCSHHHHHHHHHHHTCCGGGCSSCCCCEEECCCSEEECSSCSSCCCEEEEETTEE--
T ss_pred EEECCCCCEEEEecCCCCEEEEECCCCccccccceeEEecCCCCcccccceeeccCccccccCCcceEEEEEEcCCEE--
Confidence 9999999998765 79999221 11 02889999999998877
Q ss_pred EEeeCCCeEEEEEccCCcc---------cceeeeeeecCceecEEEEEEccC--CCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 122 ATCSSDQNIKVTRDVMGTR---------FDIETIGNFEDHYCTVWRVSWNIT--GTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 122 ~s~~~d~~i~~~d~~~~~~---------~~~~~~~~~~~h~~~v~~~~~~p~--~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
++++.|+.|++||+++... .....+..+..|...|.+++|+|+ +++|++++.||.|++||+++++..
T Consensus 245 ~~~~~d~~i~~wd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 322 (366)
T 3k26_A 245 LSKSCENAIVCWKPGKMEDDIDKIKPSESNVTILGRFDYSQCDIWYMRFSMDFWQKMLALGNQVGKLYVWDLEVEDPH 322 (366)
T ss_dssp EEECSSSEEEEEEESSTTCCGGGCCTTCCCEEEEEEEECSSCCSSCCCCEECTTSSEEEEECTTSCEEEEECCSSSGG
T ss_pred EEEecCCEEEEEeCCCccccccccccCCcchheeccccccCCcEEEEEEcCCCCCcEEEEEecCCcEEEEECCCCCCc
Confidence 9999999999999976321 112456778889999999999999 999999999999999999987644
No 70
>3ei3_B DNA damage-binding protein 2; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Danio rerio} PDB: 3ei1_B* 3ei2_B* 4a08_B* 4a09_B* 4a0a_B* 4a0b_B* 4a0k_D* 4a0l_B*
Probab=99.93 E-value=1.2e-23 Score=158.13 Aligned_cols=161 Identities=14% Similarity=0.096 Sum_probs=130.8
Q ss_pred eeeeeeeecCCCcceeEEEECCCCCC-cEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEcc-CCCcccc
Q psy13207 14 QWTRRSNLVDSRTSVTDVKFGPKQLG-LVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNH-SFSRFNS 91 (197)
Q Consensus 14 ~w~~~~~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~~~ 91 (197)
.+.+...+.+|...|.+++|+|+ + ++|++|+.||.|++||+.+.+....+.. ..+...|.+++|+| ++..+++
T Consensus 62 ~~~~~~~~~~h~~~v~~~~~~~~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~h~~~v~~~~~~~~~~~~l~s 136 (383)
T 3ei3_B 62 SYKLHRTASPFDRRVTSLEWHPT--HPTTVAVGSKGGDIILWDYDVQNKTSFIQG---MGPGDAITGMKFNQFNTNQLFV 136 (383)
T ss_dssp TCEEEEEECCCSSCEEEEEECSS--CTTEEEEEEBTSCEEEEETTSTTCEEEECC---CSTTCBEEEEEEETTEEEEEEE
T ss_pred ccceEEeccCCCCCEEEEEECCC--CCCEEEEEcCCCeEEEEeCCCcccceeeec---CCcCCceeEEEeCCCCCCEEEE
Confidence 34556678899999999999998 7 8999999999999999987754432221 12367899999999 6677765
Q ss_pred e-----eEEEE-----eeEec--ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEE
Q psy13207 92 I-----SIMYE-----AHSIN--AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159 (197)
Q Consensus 92 ~-----~~~~~-----~~~~~--~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~ 159 (197)
+ +++|+ +..+. ..|...|.+++|+++.-.|++++.|+.|++||++ ...+..+.+|...|.++
T Consensus 137 ~~~d~~i~iwd~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~d~~i~i~d~~------~~~~~~~~~h~~~v~~~ 210 (383)
T 3ei3_B 137 SSIRGATTLRDFSGSVIQVFAKTDSWDYWYCCVDVSVSRQMLATGDSTGRLLLLGLD------GHEIFKEKLHKAKVTHA 210 (383)
T ss_dssp EETTTEEEEEETTSCEEEEEECCCCSSCCEEEEEEETTTTEEEEEETTSEEEEEETT------SCEEEEEECSSSCEEEE
T ss_pred EeCCCEEEEEECCCCceEEEeccCCCCCCeEEEEECCCCCEEEEECCCCCEEEEECC------CCEEEEeccCCCcEEEE
Confidence 5 79999 33333 1345789999999444444999999999999985 46777888999999999
Q ss_pred EEccCCC-EEEEEeCCCcEEEEEcCCC
Q psy13207 160 SWNITGT-IVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 160 ~~~p~~~-~l~~~~~dg~i~iw~~~~~ 185 (197)
+|+|+++ +|++++.|+.|++||+++.
T Consensus 211 ~~~~~~~~~l~s~~~d~~i~iwd~~~~ 237 (383)
T 3ei3_B 211 EFNPRCDWLMATSSVDATVKLWDLRNI 237 (383)
T ss_dssp EECSSCTTEEEEEETTSEEEEEEGGGC
T ss_pred EECCCCCCEEEEEeCCCEEEEEeCCCC
Confidence 9999998 9999999999999999873
No 71
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.92 E-value=8.4e-24 Score=160.11 Aligned_cols=174 Identities=13% Similarity=0.222 Sum_probs=133.2
Q ss_pred cccccccceeeee------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 6 LQSEKCLNQWTRR------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
+..++.+++|++. ..+.+|...|.+++|+|+ +.+|++|+.||.|++||+.+.+....+. .+...+.+
T Consensus 192 ~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~~~~~~~-----~~~~~v~~ 264 (401)
T 4aez_A 192 GSRSGAIHHHDVRIANHQIGTLQGHSSEVCGLAWRSD--GLQLASGGNDNVVQIWDARSSIPKFTKT-----NHNAAVKA 264 (401)
T ss_dssp EETTSEEEEEETTSSSCEEEEEECCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTCSSEEEEEC-----CCSSCCCE
T ss_pred EcCCCCEEEEecccCcceeeEEcCCCCCeeEEEEcCC--CCEEEEEeCCCeEEEccCCCCCccEEec-----CCcceEEE
Confidence 4567889999865 357789999999999998 9999999999999999998865432221 23678999
Q ss_pred EEEccCCCcccc--------eeEEEE------eeEecccCCCceeEEEEcCCCeEEEE--eeCCCeEEEEEccCCcccce
Q psy13207 80 LTWNHSFSRFNS--------ISIMYE------AHSINAEHKDLIHDVAYDYYGLRMAT--CSSDQNIKVTRDVMGTRFDI 143 (197)
Q Consensus 80 ~~~~~~~~~~~~--------~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s--~~~d~~i~~~d~~~~~~~~~ 143 (197)
++|+|++..++. .+++|| +..+. +...+.+++|+++.-.+++ |+.|+.|++||+++. ..
T Consensus 265 ~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~~--~~~~v~~~~~s~~~~~l~~~~g~~dg~i~v~~~~~~---~~ 339 (401)
T 4aez_A 265 VAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTVD--AGSQVTSLIWSPHSKEIMSTHGFPDNNLSIWSYSSS---GL 339 (401)
T ss_dssp EEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEEE--CSSCEEEEEECSSSSEEEEEECTTTCEEEEEEEETT---EE
T ss_pred EEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEEe--CCCcEEEEEECCCCCeEEEEeecCCCcEEEEecCCc---cc
Confidence 999998876533 279999 33443 6678999999944333366 558999999999762 13
Q ss_pred eeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 144 ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 144 ~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
.....+.+|...|.+++|+|++++|++++.||.|++|++.+++.....
T Consensus 340 ~~~~~~~~h~~~v~~~~~s~dg~~l~s~~~dg~i~iw~~~~~~~~~~~ 387 (401)
T 4aez_A 340 TKQVDIPAHDTRVLYSALSPDGRILSTAASDENLKFWRVYDGDHVKRP 387 (401)
T ss_dssp EEEEEEECCSSCCCEEEECTTSSEEEEECTTSEEEEEECCC-------
T ss_pred eeEEEecCCCCCEEEEEECCCCCEEEEEeCCCcEEEEECCCCcccccc
Confidence 344457789999999999999999999999999999999987765543
No 72
>1sq9_A Antiviral protein SKI8; WD repeat, beta-transducin repeat, WD40 repeat, beta propeller, recombination; 1.90A {Saccharomyces cerevisiae} SCOP: b.69.4.1 PDB: 1s4u_X
Probab=99.92 E-value=8.5e-24 Score=159.22 Aligned_cols=177 Identities=19% Similarity=0.220 Sum_probs=139.7
Q ss_pred cccccccceeeee----------eeecCC-----CcceeEEEEC----CCCCCcE-EEEEeCCCcEEEEEcCC------c
Q psy13207 6 LQSEKCLNQWTRR----------SNLVDS-----RTSVTDVKFG----PKQLGLV-LATCAADGLVRIYEAPD------V 59 (197)
Q Consensus 6 ~~~~~~~~~w~~~----------~~~~~h-----~~~v~~~~~~----~~~~~~~-l~s~~~dg~v~iw~~~~------~ 59 (197)
+..++.+++|++. ..+..| ...|.+++|+ |+ +.. |++++.||.|++||+.+ .
T Consensus 87 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~~l~~~~~dg~i~iwd~~~~~~~~~~ 164 (397)
T 1sq9_A 87 TSFSGDLLFYRITREDETKKVIFEKLDLLDSDMKKHSFWALKWGASNDRL--LSHRLVATDVKGTTYIWKFHPFADESNS 164 (397)
T ss_dssp EETTSCEEEEEEEECTTTCCEEEEEECCSCTTGGGSCEEEEEEECCC------CEEEEEEETTSCEEEEEEESSSSHHHH
T ss_pred EcCCCCEEEEEccCCcccccccceeecccccccCCCcEEEEEEeeccCCC--CceEEEEEeCCCcEEEEeCCcccccccc
Confidence 3567899999864 345677 5899999999 98 889 99999999999999988 5
Q ss_pred ccccceecccee--------ccCCCeeeEEEccCCCcccce-----eEEEE------eeEeccc---C---CCceeEEEE
Q psy13207 60 MNLSQWCLQHEV--------ACPTLASCLTWNHSFSRFNSI-----SIMYE------AHSINAE---H---KDLIHDVAY 114 (197)
Q Consensus 60 ~~~~~~~~~~~~--------~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~---~---~~~i~~~~~ 114 (197)
+.+. +.....+ .+...+.+++|+|++ .++++ +++|+ +..+. . | ...|.+++|
T Consensus 165 ~~~~-~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~-~l~~~~~dg~i~i~d~~~~~~~~~~~-~~~~h~~~~~~i~~i~~ 241 (397)
T 1sq9_A 165 LTLN-WSPTLELQGTVESPMTPSQFATSVDISERG-LIATGFNNGTVQISELSTLRPLYNFE-SQHSMINNSNSIRSVKF 241 (397)
T ss_dssp TTTC-CCCEEEEEEEECCSSSSCCCCCEEEECTTS-EEEEECTTSEEEEEETTTTEEEEEEE-CCC---CCCCCEEEEEE
T ss_pred ceee-ccCcceeeeeeccccCCCCCceEEEECCCc-eEEEEeCCCcEEEEECCCCceeEEEe-ccccccccCCccceEEE
Confidence 4443 1111122 136789999999999 77655 89999 55566 6 8 899999999
Q ss_pred cCCCeEEEEeeCC---CeEEEEEccCCcccceeeeeeecC-------------ceecEEEEEEccCCCEEEEEeCCCcEE
Q psy13207 115 DYYGLRMATCSSD---QNIKVTRDVMGTRFDIETIGNFED-------------HYCTVWRVSWNITGTIVASSGDDGCVR 178 (197)
Q Consensus 115 ~~~~~~~~s~~~d---~~i~~~d~~~~~~~~~~~~~~~~~-------------h~~~v~~~~~~p~~~~l~~~~~dg~i~ 178 (197)
+++.-+|++++.| +.|++||+++ .+.+..+.+ |...|.+++|+|++++|++++.||.|+
T Consensus 242 ~~~~~~l~~~~~d~~~g~i~i~d~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~ 316 (397)
T 1sq9_A 242 SPQGSLLAIAHDSNSFGCITLYETEF-----GERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLR 316 (397)
T ss_dssp CSSTTEEEEEEEETTEEEEEEEETTT-----CCEEEEECBC--------CCBSBSSCEEEEEECSSSSEEEEEETTSEEE
T ss_pred CCCCCEEEEEecCCCCceEEEEECCC-----CcccceeccCcccccccccccccCCcEEEEEECCCCCEEEEEeCCCeEE
Confidence 9444444999999 9999999976 567777777 999999999999999999999999999
Q ss_pred EEEcCCCcchhhhh
Q psy13207 179 LWKLKKKRKKKKEE 192 (197)
Q Consensus 179 iw~~~~~~~~~~~~ 192 (197)
+||+++.+....+.
T Consensus 317 iwd~~~~~~~~~~~ 330 (397)
T 1sq9_A 317 FWDVKTKERITTLN 330 (397)
T ss_dssp EEETTTTEEEEEEE
T ss_pred EEEcCCCceeEEEe
Confidence 99999887666555
No 73
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.92 E-value=9.7e-24 Score=178.97 Aligned_cols=156 Identities=20% Similarity=0.297 Sum_probs=136.5
Q ss_pred eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eE
Q psy13207 20 NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SI 94 (197)
Q Consensus 20 ~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 94 (197)
.+.+|.+.|++++|+|+ +++|++|+.||+|++||+.+++.+..+. .+...|.+++|+|++++++++ ++
T Consensus 610 ~~~~h~~~v~~~~~s~~--~~~l~s~~~d~~i~vw~~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~~~d~~v~ 682 (1249)
T 3sfz_A 610 VVRPHTDAVYHACFSQD--GQRIASCGADKTLQVFKAETGEKLLDIK-----AHEDEVLCCAFSSDDSYIATCSADKKVK 682 (1249)
T ss_dssp EECCCSSCEEEEEECTT--SSEEEEEETTSCEEEEETTTCCEEEEEC-----CCSSCEEEEEECTTSSEEEEEETTSEEE
T ss_pred EEecccccEEEEEECCC--CCEEEEEeCCCeEEEEECCCCCEEEEec-----cCCCCEEEEEEecCCCEEEEEeCCCeEE
Confidence 46799999999999999 9999999999999999999876543332 236789999999999998776 89
Q ss_pred EEE------eeEecccCCCceeEEEEcC--CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCC
Q psy13207 95 MYE------AHSINAEHKDLIHDVAYDY--YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGT 166 (197)
Q Consensus 95 ~~~------~~~~~~~~~~~i~~~~~~~--~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 166 (197)
+|| +..+. +|...|.+++|++ +..++++|+.|+.|++||+++ ...+..+.+|...|.+++|+|+++
T Consensus 683 vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~l~sg~~d~~v~vwd~~~-----~~~~~~~~~h~~~v~~~~~sp~~~ 756 (1249)
T 3sfz_A 683 IWDSATGKLVHTYD-EHSEQVNCCHFTNKSNHLLLATGSNDFFLKLWDLNQ-----KECRNTMFGHTNSVNHCRFSPDDE 756 (1249)
T ss_dssp EEETTTCCEEEEEE-CCSSCEEEEEECSSSSCCEEEEEETTSCEEEEETTS-----SSEEEEECCCSSCEEEEEECSSTT
T ss_pred EEECCCCceEEEEc-CCCCcEEEEEEecCCCceEEEEEeCCCeEEEEECCC-----cchhheecCCCCCEEEEEEecCCC
Confidence 999 66777 8999999999984 655669999999999999987 677888889999999999999999
Q ss_pred EEEEEeCCCcEEEEEcCCCcch
Q psy13207 167 IVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 167 ~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
+|++++.||+|++||++++...
T Consensus 757 ~l~s~s~dg~v~vwd~~~~~~~ 778 (1249)
T 3sfz_A 757 LLASCSADGTLRLWDVRSANER 778 (1249)
T ss_dssp EEEEEESSSEEEEEEGGGTEEE
T ss_pred EEEEEECCCeEEEEeCCCCccc
Confidence 9999999999999999876543
No 74
>1gxr_A ESG1, transducin-like enhancer protein 1; transcriptional CO-repressor, WD40, transcription repressor, WD repeat; 1.65A {Homo sapiens} SCOP: b.69.4.1 PDB: 2ce8_A 2ce9_A
Probab=99.92 E-value=3.1e-23 Score=152.56 Aligned_cols=162 Identities=12% Similarity=0.158 Sum_probs=134.5
Q ss_pred ccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 7 QSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
..++.+++|++. ..+.+|...|.+++|+|+ +++|++++.||.|++||+++++.+..+ .....+.+++
T Consensus 160 ~~dg~v~~~d~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~dg~i~~~d~~~~~~~~~~------~~~~~v~~~~ 231 (337)
T 1gxr_A 160 CSDGNIAVWDLHNQTLVRQFQGHTDGASCIDISND--GTKLWTGGLDNTVRSWDLREGRQLQQH------DFTSQIFSLG 231 (337)
T ss_dssp ETTSCEEEEETTTTEEEEEECCCSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTEEEEEE------ECSSCEEEEE
T ss_pred eCCCcEEEEeCCCCceeeeeecccCceEEEEECCC--CCEEEEEecCCcEEEEECCCCceEeee------cCCCceEEEE
Confidence 467888999753 457889999999999998 999999999999999999887654332 3366899999
Q ss_pred EccCCCcccce-----eEEEE-----eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC
Q psy13207 82 WNHSFSRFNSI-----SIMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED 151 (197)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~ 151 (197)
|+|+++.++++ +++|+ ...+. .|...+.+++|+++.-+|++++.|+.|++||+++ .+.+.. ..
T Consensus 232 ~s~~~~~l~~~~~~~~i~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~dg~i~~~~~~~-----~~~~~~-~~ 304 (337)
T 1gxr_A 232 YCPTGEWLAVGMESSNVEVLHVNKPDKYQLH-LHESCVLSLKFAYCGKWFVSTGKDNLLNAWRTPY-----GASIFQ-SK 304 (337)
T ss_dssp ECTTSSEEEEEETTSCEEEEETTSSCEEEEC-CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTT-----CCEEEE-EE
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCCeEEEc-CCccceeEEEECCCCCEEEEecCCCcEEEEECCC-----CeEEEE-ec
Confidence 99999998765 79999 44566 7999999999995444449999999999999976 333333 34
Q ss_pred ceecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 152 HYCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 152 h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
|...|.+++|+|++++|++++.||.|++|++.
T Consensus 305 ~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 336 (337)
T 1gxr_A 305 ESSSVLSCDISVDDKYIVTGSGDKKATVYEVI 336 (337)
T ss_dssp CSSCEEEEEECTTSCEEEEEETTSCEEEEEEE
T ss_pred CCCcEEEEEECCCCCEEEEecCCCeEEEEEEe
Confidence 77899999999999999999999999999974
No 75
>3gre_A Serine/threonine-protein kinase VPS15; seven-bladed propeller, WD repeat, scaffold protein, ATP- binding, endosome, golgi apparatus; 1.80A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.8e-24 Score=165.17 Aligned_cols=179 Identities=12% Similarity=0.155 Sum_probs=135.2
Q ss_pred cccccccceeeeee---------eec-CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcC---Ccccccceec--cce
Q psy13207 6 LQSEKCLNQWTRRS---------NLV-DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAP---DVMNLSQWCL--QHE 70 (197)
Q Consensus 6 ~~~~~~~~~w~~~~---------~~~-~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~---~~~~~~~~~~--~~~ 70 (197)
+..|+++++|++.. .+. +|..+|.+++|+|+ +.+|++|+.||+|++||+. +++....... ...
T Consensus 82 ~s~dg~v~vwd~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~s~dg~i~vwd~~~~~~~~~~~~~~~~~i~~ 159 (437)
T 3gre_A 82 GSDQGVIKIWNLKEIIVGEVYSSSLTYDCSSTVTQITMIPN--FDAFAVSSKDGQIIVLKVNHYQQESEVKFLNCECIRK 159 (437)
T ss_dssp EETTSEEEEEEHHHHHTTCCCSCSEEEECSSCEEEEEECTT--SSEEEEEETTSEEEEEEEEEEEETTEEEEEEEEEEEE
T ss_pred ecCCceEEEeECcccccCcccceeeeccCCCCEEEEEEeCC--CCEEEEEeCCCEEEEEEeccccCCceeeccccceeEE
Confidence 46789999998754 222 68999999999998 9999999999999999995 3332221110 011
Q ss_pred ec-----cCCCeeeEE--EccCCCcccce-----eEEEE------eeEeccc--CCCceeEEEEcCCCeEEEEeeCCCeE
Q psy13207 71 VA-----CPTLASCLT--WNHSFSRFNSI-----SIMYE------AHSINAE--HKDLIHDVAYDYYGLRMATCSSDQNI 130 (197)
Q Consensus 71 ~~-----~~~~~~~~~--~~~~~~~~~~~-----~~~~~------~~~~~~~--~~~~i~~~~~~~~~~~~~s~~~d~~i 130 (197)
+. ....+.++. +++++..++++ +++|| +..+. . |...|.+++|+++.-+|++|+.|+.|
T Consensus 160 ~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~-~~~h~~~v~~~~~s~~~~~l~s~~~dg~i 238 (437)
T 3gre_A 160 INLKNFGKNEYAVRMRAFVNEEKSLLVALTNLSRVIIFDIRTLERLQIIE-NSPRHGAVSSICIDEECCVLILGTTRGII 238 (437)
T ss_dssp EEGGGGSSCCCEEEEEEEECSSCEEEEEEETTSEEEEEETTTCCEEEEEE-CCGGGCCEEEEEECTTSCEEEEEETTSCE
T ss_pred EEccCcccccCceEEEEEEcCCCCEEEEEeCCCeEEEEeCCCCeeeEEEc-cCCCCCceEEEEECCCCCEEEEEcCCCeE
Confidence 11 244566666 55778887765 89999 55555 5 88999999999554444999999999
Q ss_pred EEEEccCCcccceeeeeeec-CceecEEEEEEcc----CCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 131 KVTRDVMGTRFDIETIGNFE-DHYCTVWRVSWNI----TGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p----~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
++||+++ ..++..+. .|...|.+++|+| ++.+|++++.||.|++||+++++....+.
T Consensus 239 ~iwd~~~-----~~~~~~~~~~~~~~v~~~~~~~~~s~~~~~l~s~~~dg~i~iwd~~~~~~~~~~~ 300 (437)
T 3gre_A 239 DIWDIRF-----NVLIRSWSFGDHAPITHVEVCQFYGKNSVIVVGGSSKTFLTIWNFVKGHCQYAFI 300 (437)
T ss_dssp EEEETTT-----TEEEEEEBCTTCEEEEEEEECTTTCTTEEEEEEESTTEEEEEEETTTTEEEEEEE
T ss_pred EEEEcCC-----ccEEEEEecCCCCceEEEEeccccCCCccEEEEEcCCCcEEEEEcCCCcEEEEEE
Confidence 9999986 56677665 7788999996654 67899999999999999999876554443
No 76
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.92 E-value=3.1e-23 Score=153.82 Aligned_cols=173 Identities=13% Similarity=0.162 Sum_probs=133.4
Q ss_pred cccccccceeeeee------eecCCCc----ceeEEE----ECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee
Q psy13207 6 LQSEKCLNQWTRRS------NLVDSRT----SVTDVK----FGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV 71 (197)
Q Consensus 6 ~~~~~~~~~w~~~~------~~~~h~~----~v~~~~----~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~ 71 (197)
+..++.+++|++.. .+..|.+ .|.++. |+|+ +.+|++++.||.|++||+++.+... ..
T Consensus 135 ~~~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~------~~ 206 (357)
T 3i2n_A 135 GSRDGTVKVWDPRQKDDPVANMEPVQGENKRDCWTVAFGNAYNQE--ERVVCAGYDNGDIKLFDLRNMALRW------ET 206 (357)
T ss_dssp EETTSCEEEECTTSCSSCSEEECCCTTSCCCCEEEEEEECCCC-C--CCEEEEEETTSEEEEEETTTTEEEE------EE
T ss_pred EeCCCeEEEEeCCCCCCcceeccccCCCCCCceEEEEEEeccCCC--CCEEEEEccCCeEEEEECccCceee------ec
Confidence 35678999998643 3444443 899998 6788 9999999999999999998875421 22
Q ss_pred ccCCCeeeEEEcc---CCCcccce-----eEEEEee-----------EecccCCCceeEEEEcCCCe-EEEEeeCCCeEE
Q psy13207 72 ACPTLASCLTWNH---SFSRFNSI-----SIMYEAH-----------SINAEHKDLIHDVAYDYYGL-RMATCSSDQNIK 131 (197)
Q Consensus 72 ~~~~~~~~~~~~~---~~~~~~~~-----~~~~~~~-----------~~~~~~~~~i~~~~~~~~~~-~~~s~~~d~~i~ 131 (197)
.....+.+++|+| ++..++++ +++|++. .+. .|...|.+++|+++.- +|++++.|+.|+
T Consensus 207 ~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~dg~i~ 285 (357)
T 3i2n_A 207 NIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDMRTQHPTKGFASVSEK-AHKSTVWQVRHLPQNRELFLTAGGAGGLH 285 (357)
T ss_dssp ECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEEEEEETTTEEEEEEEE-CCSSCEEEEEEETTEEEEEEEEETTSEEE
T ss_pred CCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeCcCCCcccceeeeccC-CCcCCEEEEEECCCCCcEEEEEeCCCcEE
Confidence 3367899999999 88887765 7999922 223 7899999999996543 459999999999
Q ss_pred EEEccCCccc--------------ceeeeeeecCceecEEEEEEccCCCEEE-EEeCCCcEEEEEcCCCcc
Q psy13207 132 VTRDVMGTRF--------------DIETIGNFEDHYCTVWRVSWNITGTIVA-SSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 132 ~~d~~~~~~~--------------~~~~~~~~~~h~~~v~~~~~~p~~~~l~-~~~~dg~i~iw~~~~~~~ 187 (197)
+||++..... ....+..+.+|...|.+++|+|++++|+ +++.||.|++||+.+...
T Consensus 286 iwd~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~s~~~d~~i~iw~~~~~~~ 356 (357)
T 3i2n_A 286 LWKYEYPIQRSKKDSEGIEMGVAGSVSLLQNVTLSTQPISSLDWSPDKRGLCVCSSFDQTVRVLIVTKLNK 356 (357)
T ss_dssp EEEEECCSCC--CCTTSCCCCCCCEEEEEEEEECCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECC---
T ss_pred EeecCCCcccccccCCCCccccccccceeeccccCCCCeeEEEEcCCCCeEEEEecCCCcEEEEECCCccc
Confidence 9999753211 1246777889999999999999999998 899999999999987543
No 77
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3.4e-23 Score=151.01 Aligned_cols=168 Identities=16% Similarity=0.220 Sum_probs=134.5
Q ss_pred cccccccceeeee---eeecCCCcceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 6 LQSEKCLNQWTRR---SNLVDSRTSVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 6 ~~~~~~~~~w~~~---~~~~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
+..++.+++|+.. ..+..|..+|.++.|.| + +..|++++.||.|++||.... ...+. ......+.+++
T Consensus 120 ~~~d~~i~~~d~~~~~~~~~~~~~~v~~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~--~~~~~----~~~~~~i~~~~ 191 (313)
T 3odt_A 120 GSWDKTAKVWKEGSLVYNLQAHNASVWDAKVVSFS--ENKFLTASADKTIKLWQNDKV--IKTFS----GIHNDVVRHLA 191 (313)
T ss_dssp EETTSEEEEEETTEEEEEEECCSSCEEEEEEEETT--TTEEEEEETTSCEEEEETTEE--EEEEC----SSCSSCEEEEE
T ss_pred EeCCCCEEEEcCCcEEEecccCCCceeEEEEccCC--CCEEEEEECCCCEEEEecCce--EEEEe----ccCcccEEEEE
Confidence 3567888999732 35778999999999998 6 889999999999999994322 11111 11367899999
Q ss_pred EccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec
Q psy13207 82 WNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE 150 (197)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~ 150 (197)
|+|++. ++++ +++|+ +..+. .|...|.+++|+++. .|++++.|+.|++||+++ .+.+..+.
T Consensus 192 ~~~~~~-~~~~~~dg~i~i~d~~~~~~~~~~~-~~~~~i~~~~~~~~~-~l~~~~~dg~v~iwd~~~-----~~~~~~~~ 263 (313)
T 3odt_A 192 VVDDGH-FISCSNDGLIKLVDMHTGDVLRTYE-GHESFVYCIKLLPNG-DIVSCGEDRTVRIWSKEN-----GSLKQVIT 263 (313)
T ss_dssp EEETTE-EEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEECTTS-CEEEEETTSEEEEECTTT-----CCEEEEEE
T ss_pred EcCCCe-EEEccCCCeEEEEECCchhhhhhhh-cCCceEEEEEEecCC-CEEEEecCCEEEEEECCC-----CceeEEEe
Confidence 999999 5443 89999 56666 899999999999543 249999999999999977 67778888
Q ss_pred CceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 151 DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 151 ~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
.|...|.+++|+|+++ +++++.||.|++||+++++....
T Consensus 264 ~~~~~i~~~~~~~~~~-~~~~~~dg~i~iw~~~~~~~~~~ 302 (313)
T 3odt_A 264 LPAISIWSVDCMSNGD-IIVGSSDNLVRIFSQEKSRWASE 302 (313)
T ss_dssp CSSSCEEEEEECTTSC-EEEEETTSCEEEEESCGGGCCC-
T ss_pred ccCceEEEEEEccCCC-EEEEeCCCcEEEEeCCCCceeeh
Confidence 8999999999999998 66789999999999988665443
No 78
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.9e-23 Score=168.57 Aligned_cols=175 Identities=18% Similarity=0.227 Sum_probs=140.8
Q ss_pred cccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCe
Q psy13207 6 LQSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLA 77 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~ 77 (197)
+..++.+++|++. ..+.+|.++|.+++|+|+.++++|++|+.||+|++||+.+++.. ....+. +...+
T Consensus 27 g~~dg~I~vwd~~~~~~~~~~~l~~h~~~V~~l~~s~~~~~~~l~s~s~Dg~I~vwd~~~~~~~----~~~~~~~h~~~V 102 (753)
T 3jro_A 27 CSSDKTIKIFEVEGETHKLIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWKEENGRWS----QIAVHAVHSASV 102 (753)
T ss_dssp EETTTEEEEEEEETTEEEEEEEECCCSSCEEEEEECCTTSCSEEEEEETTSCEEEEEEETTEEE----EEEEECCCSSCE
T ss_pred EECCCcEEEEecCCCCCccceeccCCcCceEEEEecCCCCCCEEEEEeCCCeEEEEECCCCccc----ccccccCCCCCe
Confidence 3568999999875 25789999999999997644789999999999999999876421 112222 36789
Q ss_pred eeEEEccC--CCcccce-----eEEEE--------eeEecccCCCceeEEEEcC-------------CCeEEEEeeCCCe
Q psy13207 78 SCLTWNHS--FSRFNSI-----SIMYE--------AHSINAEHKDLIHDVAYDY-------------YGLRMATCSSDQN 129 (197)
Q Consensus 78 ~~~~~~~~--~~~~~~~-----~~~~~--------~~~~~~~~~~~i~~~~~~~-------------~~~~~~s~~~d~~ 129 (197)
.+++|+|+ +..++++ +++|+ ...+. +|...|.+++|++ +.-.+++|+.||.
T Consensus 103 ~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~~-~~~~~v~~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~ 181 (753)
T 3jro_A 103 NSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIIID-AHAIGVNSASWAPATIEEDGEHNGTKESRKFVTGGADNL 181 (753)
T ss_dssp EEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEEE-CCSSCEEEEEECCCC---------CGGGCCEEEEETTSC
T ss_pred EEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEee-cCCCceEEEEecCcccccccccccCCCCCEEEEEECCCe
Confidence 99999999 8887765 79999 23344 7889999999986 2334499999999
Q ss_pred EEEEEccCCcccceeeeeeecCceecEEEEEEccC---CCEEEEEeCCCcEEEEEcCCCc
Q psy13207 130 IKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT---GTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 130 i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~---~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
|++||+++.... ......+.+|...|.+++|+|+ +++|++++.||.|++||++++.
T Consensus 182 I~iwd~~~~~~~-~~~~~~~~~h~~~V~~l~~sp~~~~~~~l~s~s~Dg~I~iwd~~~~~ 240 (753)
T 3jro_A 182 VKIWKYNSDAQT-YVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQ 240 (753)
T ss_dssp EEEEEEETTTTE-EEEEEEECCCSSCEEEEEECCCCSSSEEEEEEESSSCEEEEEESSSS
T ss_pred EEEEeccCCccc-ceeeeeecCCCCcEEEEEeccCCCCCCEEEEEecCCEEEEecCCCCC
Confidence 999999863211 3566778899999999999999 9999999999999999998753
No 79
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.92 E-value=2.3e-23 Score=159.11 Aligned_cols=173 Identities=17% Similarity=0.297 Sum_probs=133.9
Q ss_pred ccccccceeeeee---------------eecCCCcceeEEEECCCCCCc-EEEEEeCCCcEEEEEcCCcccccc-eeccc
Q psy13207 7 QSEKCLNQWTRRS---------------NLVDSRTSVTDVKFGPKQLGL-VLATCAADGLVRIYEAPDVMNLSQ-WCLQH 69 (197)
Q Consensus 7 ~~~~~~~~w~~~~---------------~~~~h~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iw~~~~~~~~~~-~~~~~ 69 (197)
..++.+++|++.. .+.+|...|.+++|+|+ +. +|++|+.||.|++|++........ .....
T Consensus 148 ~~dg~V~vwd~~~~~~~~~~~~~~~~~~~~~~h~~~v~~l~~~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~~~~~ 225 (430)
T 2xyi_A 148 TPSSDVLVFDYTKHPSKPEPSGECQPDLRLRGHQKEGYGLSWNPN--LNGYLLSASDDHTICLWDINATPKEHRVIDAKN 225 (430)
T ss_dssp CSSSCEEEEEGGGSCSSCCTTCCCCCSEEEECCSSCCCCEEECTT--STTEEEEECTTSCEEEEETTSCCBGGGEEECSE
T ss_pred CCCCcEEEEECCCcccccCccccCCCcEEecCCCCCeEEEEeCCC--CCCeEEEEeCCCeEEEEeCCCCCCCCceeccce
Confidence 4577888887653 36789999999999998 76 999999999999999987432211 11122
Q ss_pred ee-ccCCCeeeEEEccC-CCcccce-----eEEEE---------eeEecccCCCceeEEEEcCCC-eEEEEeeCCCeEEE
Q psy13207 70 EV-ACPTLASCLTWNHS-FSRFNSI-----SIMYE---------AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKV 132 (197)
Q Consensus 70 ~~-~~~~~~~~~~~~~~-~~~~~~~-----~~~~~---------~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~ 132 (197)
.+ .+...+.+++|+|+ +..++++ +++|| +..+. .|...|++++|+++. .+|++|+.|+.|++
T Consensus 226 ~~~~h~~~v~~v~~~p~~~~~l~s~~~dg~i~i~d~~~~~~~~~~~~~~-~~~~~v~~i~~~p~~~~~l~tg~~dg~v~v 304 (430)
T 2xyi_A 226 IFTGHTAVVEDVAWHLLHESLFGSVADDQKLMIWDTRNNNTSKPSHTVD-AHTAEVNCLSFNPYSEFILATGSADKTVAL 304 (430)
T ss_dssp EECCCSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCSCSSSCSEEEE-CCSSCEEEEEECSSCTTEEEEEETTSEEEE
T ss_pred eecCCCCCEeeeEEeCCCCCEEEEEeCCCeEEEEECCCCCCCcceeEee-cCCCCeEEEEeCCCCCCEEEEEeCCCeEEE
Confidence 22 23678999999995 5555544 89999 23445 789999999999322 12389999999999
Q ss_pred EEccCCcccceeeeeeecCceecEEEEEEccCCC-EEEEEeCCCcEEEEEcCCCc
Q psy13207 133 TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGT-IVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 133 ~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~~~~~dg~i~iw~~~~~~ 186 (197)
||+++. ...+..+.+|...|.+++|+|+++ +|++++.||.|++||++..+
T Consensus 305 wd~~~~----~~~~~~~~~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~~ 355 (430)
T 2xyi_A 305 WDLRNL----KLKLHSFESHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKIG 355 (430)
T ss_dssp EETTCT----TSCSEEEECCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGTT
T ss_pred EeCCCC----CCCeEEeecCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCCc
Confidence 999852 345677788999999999999985 79999999999999998743
No 80
>3vl1_A 26S proteasome regulatory subunit RPN14; beta-propeller, chaperone, RPT6; 1.60A {Saccharomyces cerevisiae} PDB: 3acp_A
Probab=99.92 E-value=3.6e-24 Score=162.48 Aligned_cols=174 Identities=13% Similarity=0.145 Sum_probs=133.0
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee---------
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV--------- 71 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~--------- 71 (197)
+..|+.+++|++. ..+.+|...|.+++|+|+ +.+|++++.||+|++||+++++.+..+......
T Consensus 157 ~s~d~~i~iwd~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~d~~v~iwd~~~~~~~~~~~~~~~~~~~v~~~~~ 234 (420)
T 3vl1_A 157 SSQDMQLKIWSVKDGSNPRTLIGHRATVTDIAIIDR--GRNVLSASLDGTIRLWECGTGTTIHTFNRKENPHDGVNSIAL 234 (420)
T ss_dssp EETTSEEEEEETTTCCCCEEEECCSSCEEEEEEETT--TTEEEEEETTSCEEEEETTTTEEEEEECBTTBTTCCEEEEEE
T ss_pred EeCCCeEEEEeCCCCcCceEEcCCCCcEEEEEEcCC--CCEEEEEcCCCcEEEeECCCCceeEEeecCCCCCCCccEEEE
Confidence 4567899999864 357899999999999998 999999999999999999988665444321100
Q ss_pred ----------ccCCCeeeEEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCe-EEEEeeCCCe
Q psy13207 72 ----------ACPTLASCLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGL-RMATCSSDQN 129 (197)
Q Consensus 72 ----------~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~-~~~s~~~d~~ 129 (197)
.....+.+++|+|++++++++ +++|| +..+...|...|.+++|+++.- +|++++.|+.
T Consensus 235 ~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~i~d~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~g~~dg~ 314 (420)
T 3vl1_A 235 FVGTDRQLHEISTSKKNNLEFGTYGKYVIAGHVSGVITVHNVFSKEQTIQLPSKFTCSCNSLTVDGNNANYIYAGYENGM 314 (420)
T ss_dssp EECCCSSCGGGCCCCCCTTCSSCTTEEEEEEETTSCEEEEETTTCCEEEEECCTTSSCEEEEEECSSCTTEEEEEETTSE
T ss_pred ecCCcceeeecccCcccceEEcCCCCEEEEEcCCCeEEEEECCCCceeEEcccccCCCceeEEEeCCCCCEEEEEeCCCe
Confidence 013556677788999888765 89999 3344436889999999994422 3399999999
Q ss_pred EEEEEccCCcccceeeeeeecC-ceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 130 IKVTRDVMGTRFDIETIGNFED-HYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 130 i~~~d~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
|++||+++. ..++..+.. |...|.++.+ |++++|++++.||.|++|++....
T Consensus 315 i~vwd~~~~----~~~~~~~~~~~~~~v~~~~~-~~~~~l~s~~~d~~v~iw~~~~~~ 367 (420)
T 3vl1_A 315 LAQWDLRSP----ECPVGEFLINEGTPINNVYF-AAGALFVSSGFDTSIKLDIISDPE 367 (420)
T ss_dssp EEEEETTCT----TSCSEEEEESTTSCEEEEEE-ETTEEEEEETTTEEEEEEEECCTT
T ss_pred EEEEEcCCC----cCchhhhhccCCCCceEEEe-CCCCEEEEecCCccEEEEeccCCC
Confidence 999999863 123455555 6677888855 578899999999999999998743
No 81
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.92 E-value=1.9e-23 Score=155.29 Aligned_cols=178 Identities=14% Similarity=0.155 Sum_probs=132.6
Q ss_pred cccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 6 LQSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
+..++.+++|++. ..+.+|..+|.+++|+|+ +++|++++.||.|++||+.+.+... ...+...+.
T Consensus 60 ~~~dg~i~iw~~~~~~~~~~~~~~~h~~~v~~~~~~~~--~~~l~s~~~dg~v~iwd~~~~~~~~------~~~~~~~v~ 131 (368)
T 3mmy_A 60 GSWANDVRCWEVQDSGQTIPKAQQMHTGPVLDVCWSDD--GSKVFTASCDKTAKMWDLSSNQAIQ------IAQHDAPVK 131 (368)
T ss_dssp EETTSEEEEEEECTTSCEEEEEEEECSSCEEEEEECTT--SSEEEEEETTSEEEEEETTTTEEEE------EEECSSCEE
T ss_pred ECCCCcEEEEEcCCCCceeEEEeccccCCEEEEEECcC--CCEEEEEcCCCcEEEEEcCCCCcee------eccccCceE
Confidence 3568899999876 357789999999999998 9999999999999999998875432 223477899
Q ss_pred eEEE--ccCCCcccce-----eEEEE------eeEec----------------------------------------ccC
Q psy13207 79 CLTW--NHSFSRFNSI-----SIMYE------AHSIN----------------------------------------AEH 105 (197)
Q Consensus 79 ~~~~--~~~~~~~~~~-----~~~~~------~~~~~----------------------------------------~~~ 105 (197)
+++| +|++.+++++ +++|| +..+. ..+
T Consensus 132 ~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~ 211 (368)
T 3mmy_A 132 TIHWIKAPNYSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYPMAVVATAERGLIVYQLENQPSEFRRIESPL 211 (368)
T ss_dssp EEEEEECSSCEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETTEEEEEEGGGCEEEEECSSSCEEEEECCCSC
T ss_pred EEEEEeCCCCCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCCeeEEEeCCCcEEEEEeccccchhhhccccc
Confidence 9999 8888877665 78888 12221 011
Q ss_pred CCceeEEEEc--CCC--eEEEEeeCCCeEEEEEccCCcccceeeeeeecCcee------------cEEEEEEccCCCEEE
Q psy13207 106 KDLIHDVAYD--YYG--LRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC------------TVWRVSWNITGTIVA 169 (197)
Q Consensus 106 ~~~i~~~~~~--~~~--~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~------------~v~~~~~~p~~~~l~ 169 (197)
...+.++++. +.. -.+++++.|+.|++||++.... ...+..+.+|.. .|.+++|+|++++|+
T Consensus 212 ~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~sp~~~~l~ 289 (368)
T 3mmy_A 212 KHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNP--AKDNFTFKCHRSNGTNTSAPQDIYAVNGIAFHPVHGTLA 289 (368)
T ss_dssp SSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCH--HHHSEEEECSEEC----CCCEEECCEEEEEECTTTCCEE
T ss_pred cCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCc--cccceeeeeeecccccccccccccceEEEEEecCCCEEE
Confidence 1223334333 222 1139999999999999976311 144556666765 799999999999999
Q ss_pred EEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 170 SSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 170 ~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
+++.||.|++||+++++....+..
T Consensus 290 s~~~dg~i~iwd~~~~~~~~~~~~ 313 (368)
T 3mmy_A 290 TVGSDGRFSFWDKDARTKLKTSEQ 313 (368)
T ss_dssp EEETTSCEEEEETTTTEEEEECCC
T ss_pred EEccCCeEEEEECCCCcEEEEecC
Confidence 999999999999998776665543
No 82
>2xyi_A Probable histone-binding protein CAF1; transcription, repressor, phosphoprotein, WD-repeat; HET: PG4; 1.75A {Drosophila melanogaster} PDB: 3c99_A 3c9c_A 2yb8_B 2yba_A 2xu7_A* 3gfc_A 3cfs_B 3cfv_B
Probab=99.92 E-value=3.8e-23 Score=157.96 Aligned_cols=174 Identities=18% Similarity=0.292 Sum_probs=136.9
Q ss_pred cccccccceeeeee------------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee-c
Q psy13207 6 LQSEKCLNQWTRRS------------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV-A 72 (197)
Q Consensus 6 ~~~~~~~~~w~~~~------------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~-~ 72 (197)
+..++.+++|++.. .+.+|...|.+++|+|.+ +.+|++++.||.|++||+++...... ...+ .
T Consensus 200 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~h~~~v~~v~~~p~~-~~~l~s~~~dg~i~i~d~~~~~~~~~---~~~~~~ 275 (430)
T 2xyi_A 200 ASDDHTICLWDINATPKEHRVIDAKNIFTGHTAVVEDVAWHLLH-ESLFGSVADDQKLMIWDTRNNNTSKP---SHTVDA 275 (430)
T ss_dssp ECTTSCEEEEETTSCCBGGGEEECSEEECCCSSCEEEEEECSSC-TTEEEEEETTSEEEEEETTCSCSSSC---SEEEEC
T ss_pred EeCCCeEEEEeCCCCCCCCceeccceeecCCCCCEeeeEEeCCC-CCEEEEEeCCCeEEEEECCCCCCCcc---eeEeec
Confidence 45678899998653 356899999999999942 78999999999999999987632111 1122 2
Q ss_pred cCCCeeeEEEccCCCc-ccce-----eEEEE-------eeEecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEccCC
Q psy13207 73 CPTLASCLTWNHSFSR-FNSI-----SIMYE-------AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMG 138 (197)
Q Consensus 73 ~~~~~~~~~~~~~~~~-~~~~-----~~~~~-------~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~ 138 (197)
+...+.+++|+|++.. ++++ +++|| +..+. .|...|.+++|+++. .+|++++.|+.|++||++..
T Consensus 276 ~~~~v~~i~~~p~~~~~l~tg~~dg~v~vwd~~~~~~~~~~~~-~h~~~v~~i~~sp~~~~~l~s~~~d~~i~iwd~~~~ 354 (430)
T 2xyi_A 276 HTAEVNCLSFNPYSEFILATGSADKTVALWDLRNLKLKLHSFE-SHKDEIFQVQWSPHNETILASSGTDRRLHVWDLSKI 354 (430)
T ss_dssp CSSCEEEEEECSSCTTEEEEEETTSEEEEEETTCTTSCSEEEE-CCSSCEEEEEECSSCTTEEEEEETTSCCEEEEGGGT
T ss_pred CCCCeEEEEeCCCCCCEEEEEeCCCeEEEEeCCCCCCCeEEee-cCCCCEEEEEECCCCCCEEEEEeCCCcEEEEeCCCC
Confidence 3678999999999985 5444 89999 55666 799999999999433 23499999999999999752
Q ss_pred cccc---------eeeeeeecCceecEEEEEEccCCC-EEEEEeCCCcEEEEEcCC
Q psy13207 139 TRFD---------IETIGNFEDHYCTVWRVSWNITGT-IVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 139 ~~~~---------~~~~~~~~~h~~~v~~~~~~p~~~-~l~~~~~dg~i~iw~~~~ 184 (197)
.... ...+..+.+|...|.+++|+|+++ +|++++.||.|++|++..
T Consensus 355 ~~~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~~l~s~s~dg~i~iw~~~~ 410 (430)
T 2xyi_A 355 GEEQSTEDAEDGPPELLFIHGGHTAKISDFSWNPNEPWIICSVSEDNIMQVWQMAE 410 (430)
T ss_dssp TCCCCHHHHHHCCTTEEEECCCCSSCEEEEEECSSSTTEEEEEETTSEEEEEEECH
T ss_pred ccccCccccccCCcceEEEcCCCCCCceEEEECCCCCCEEEEEECCCCEEEeEccc
Confidence 1110 256777888999999999999998 999999999999999975
No 83
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.92 E-value=8.8e-24 Score=172.30 Aligned_cols=162 Identities=17% Similarity=0.145 Sum_probs=137.0
Q ss_pred eeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---
Q psy13207 16 TRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--- 92 (197)
Q Consensus 16 ~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--- 92 (197)
++...+.+|.+.|.+++|+|+ +.+|++++.||.|++||+.+++.+..+. .+...+.+++|+|++++++++
T Consensus 4 ~~~~~~~~h~~~v~~i~~sp~--~~~la~~~~~g~v~iwd~~~~~~~~~~~-----~~~~~v~~~~~s~~~~~l~~~~~d 76 (814)
T 3mkq_A 4 DIKKTFSNRSDRVKGIDFHPT--EPWVLTTLYSGRVEIWNYETQVEVRSIQ-----VTETPVRAGKFIARKNWIIVGSDD 76 (814)
T ss_dssp CCEEEEEEECSCEEEEEECSS--SSEEEEEETTSEEEEEETTTTEEEEEEE-----CCSSCEEEEEEEGGGTEEEEEETT
T ss_pred ccceeeecCCCceEEEEECCC--CCEEEEEeCCCEEEEEECCCCceEEEEe-----cCCCcEEEEEEeCCCCEEEEEeCC
Confidence 455678899999999999999 9999999999999999998876543332 236789999999999998766
Q ss_pred --eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEcc-
Q psy13207 93 --SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNI- 163 (197)
Q Consensus 93 --~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p- 163 (197)
+++|+ +..+. +|...|.+++|+++.-+|++++.|+.|++||+++. ......+.+|...|.+++|+|
T Consensus 77 g~i~vw~~~~~~~~~~~~-~~~~~v~~~~~s~~~~~l~~~~~dg~i~vw~~~~~----~~~~~~~~~~~~~v~~~~~~p~ 151 (814)
T 3mkq_A 77 FRIRVFNYNTGEKVVDFE-AHPDYIRSIAVHPTKPYVLSGSDDLTVKLWNWENN----WALEQTFEGHEHFVMCVAFNPK 151 (814)
T ss_dssp SEEEEEETTTCCEEEEEE-CCSSCEEEEEECSSSSEEEEEETTSEEEEEEGGGT----SEEEEEEECCSSCEEEEEEETT
T ss_pred CeEEEEECCCCcEEEEEe-cCCCCEEEEEEeCCCCEEEEEcCCCEEEEEECCCC----ceEEEEEcCCCCcEEEEEEEcC
Confidence 79999 56666 89999999999955444499999999999999752 356677888999999999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCCcchh
Q psy13207 164 TGTIVASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 164 ~~~~l~~~~~dg~i~iw~~~~~~~~~ 189 (197)
++++|++++.||+|++||+.......
T Consensus 152 ~~~~l~~~~~dg~v~vwd~~~~~~~~ 177 (814)
T 3mkq_A 152 DPSTFASGCLDRTVKVWSLGQSTPNF 177 (814)
T ss_dssp EEEEEEEEETTSEEEEEETTCSSCSE
T ss_pred CCCEEEEEeCCCeEEEEECCCCccee
Confidence 89999999999999999998765443
No 84
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.92 E-value=5.1e-24 Score=161.25 Aligned_cols=182 Identities=19% Similarity=0.281 Sum_probs=140.0
Q ss_pred cccccccceeeeee---------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccccc----ceeccceec
Q psy13207 6 LQSEKCLNQWTRRS---------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLS----QWCLQHEVA 72 (197)
Q Consensus 6 ~~~~~~~~~w~~~~---------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~----~~~~~~~~~ 72 (197)
+..++.+++|++.. .+.+|...|.+++|+|++ +.+|++++.||.|++||+.+.+... .+.......
T Consensus 85 ~~~dg~v~vw~~~~~~~~~~~~~~~~~h~~~v~~~~~~~~~-~~~l~s~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~ 163 (416)
T 2pm9_A 85 ALDNGSLELYSTNEANNAINSMARFSNHSSSVKTVKFNAKQ-DNVLASGGNNGEIFIWDMNKCTESPSNYTPLTPGQSMS 163 (416)
T ss_dssp EESSSCEEEECCSSTTSCCCEEEECCCSSSCCCEEEECSSS-TTBEEEECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCC
T ss_pred EccCCeEEEeecccccccccchhhccCCccceEEEEEcCCC-CCEEEEEcCCCeEEEEECCCCccccccccccccccccC
Confidence 34678899997654 467899999999999963 6789999999999999998775110 111111122
Q ss_pred cCCCeeeEEEccC-CCcccce-----eEEEE------eeEecccC------CCceeEEEEcCCC-eEEEEeeCCC---eE
Q psy13207 73 CPTLASCLTWNHS-FSRFNSI-----SIMYE------AHSINAEH------KDLIHDVAYDYYG-LRMATCSSDQ---NI 130 (197)
Q Consensus 73 ~~~~~~~~~~~~~-~~~~~~~-----~~~~~------~~~~~~~~------~~~i~~~~~~~~~-~~~~s~~~d~---~i 130 (197)
+...+.+++|+|+ +..++++ +++|| +..+. .+ ...+.+++|+++. .++++++.|+ .|
T Consensus 164 ~~~~v~~~~~~~~~~~~l~~~~~dg~v~iwd~~~~~~~~~~~-~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i 242 (416)
T 2pm9_A 164 SVDEVISLAWNQSLAHVFASAGSSNFASIWDLKAKKEVIHLS-YTSPNSGIKQQLSVVEWHPKNSTRVATATGSDNDPSI 242 (416)
T ss_dssp SSCCCCEEEECSSCTTEEEEESSSSCEEEEETTTTEEEEEEC-CCCCSSCCCCCEEEEEECSSCTTEEEEEECCSSSCCC
T ss_pred CCCCeeEEEeCCCCCcEEEEEcCCCCEEEEECCCCCcceEEe-ccccccccCCceEEEEECCCCCCEEEEEECCCCCceE
Confidence 3678999999999 5666554 89999 44444 44 7889999999442 2339999998 99
Q ss_pred EEEEccCCcccceeeeeeec-CceecEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 131 KVTRDVMGTRFDIETIGNFE-DHYCTVWRVSWNI-TGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~-~h~~~v~~~~~~p-~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
++||+++. ...+..+. +|...|.+++|+| ++++|++++.||.|++||+++++....+..
T Consensus 243 ~~~d~~~~----~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~wd~~~~~~~~~~~~ 303 (416)
T 2pm9_A 243 LIWDLRNA----NTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLWNPESAEQLSQFPA 303 (416)
T ss_dssp CEEETTST----TSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEECSSSCCEEEEEEC
T ss_pred EEEeCCCC----CCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEeeCCCCccceeecC
Confidence 99999862 24556677 8999999999999 899999999999999999998776655543
No 85
>1r5m_A SIR4-interacting protein SIF2; transcription corepressor, WD40 repeat, beta propeller; 1.55A {Saccharomyces cerevisiae}
Probab=99.92 E-value=2.2e-23 Score=157.72 Aligned_cols=168 Identities=11% Similarity=0.129 Sum_probs=135.7
Q ss_pred ccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 7 QSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 7 ~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
..++.+++|++.. .+.+|..+|.+++|+|+ +++|++++.||.|++||+.+.+....+. .+...+.+++
T Consensus 224 ~~~g~i~~~d~~~~~~~~~~~~~~~~i~~~~~~~~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~-----~~~~~i~~~~ 296 (425)
T 1r5m_A 224 GPKGAIFVYQITEKTPTGKLIGHHGPISVLEFNDT--NKLLLSASDDGTLRIWHGGNGNSQNCFY-----GHSQSIVSAS 296 (425)
T ss_dssp CGGGCEEEEETTCSSCSEEECCCSSCEEEEEEETT--TTEEEEEETTSCEEEECSSSBSCSEEEC-----CCSSCEEEEE
T ss_pred cCCCeEEEEEcCCCceeeeeccCCCceEEEEECCC--CCEEEEEcCCCEEEEEECCCCccceEec-----CCCccEEEEE
Confidence 4567888887653 57789999999999998 9999999999999999998876543322 1367899999
Q ss_pred EccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCc-----------
Q psy13207 82 WNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGT----------- 139 (197)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~----------- 139 (197)
|+|++ .++++ +++|+ +..+. .|...+.+++|+++.-+|++++.|+.|++||+++..
T Consensus 297 ~~~~~-~l~~~~~d~~i~i~d~~~~~~~~~~~-~~~~~i~~~~~s~~~~~l~~~~~dg~i~i~~~~~~~~~~~~~~~~~~ 374 (425)
T 1r5m_A 297 WVGDD-KVISCSMDGSVRLWSLKQNTLLALSI-VDGVPIFAGRISQDGQKYAVAFMDGQVNVYDLKKLNSKSRSLYGNRD 374 (425)
T ss_dssp EETTT-EEEEEETTSEEEEEETTTTEEEEEEE-CTTCCEEEEEECTTSSEEEEEETTSCEEEEECHHHHC----------
T ss_pred ECCCC-EEEEEeCCCcEEEEECCCCcEeEecc-cCCccEEEEEEcCCCCEEEEEECCCeEEEEECCCCccceeeeecccc
Confidence 99999 65544 89999 55566 789999999999554444999999999999997521
Q ss_pred ----ccceeeeeeecCcee--cEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 140 ----RFDIETIGNFEDHYC--TVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 140 ----~~~~~~~~~~~~h~~--~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
......+..+.+|.. .|.+++|+|++++|++++.||.|++|+++
T Consensus 375 ~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~l~~~~~dg~i~iw~~~ 424 (425)
T 1r5m_A 375 GILNPLPIPLYASYQSSQDNDYIFDLSWNCAGNKISVAYSLQEGSVVAIP 424 (425)
T ss_dssp ----CEECCEEEEECCTTCCCCEEEEEECTTSSEEEEEESSSCCEEEECC
T ss_pred cccCcccchhhhhhcCcccCCceEEEEccCCCceEEEEecCceEEEEeec
Confidence 000116788888866 99999999999999999999999999985
No 86
>2pm9_A Protein WEB1, protein transport protein SEC31; beta propeller; 3.30A {Saccharomyces cerevisiae}
Probab=99.92 E-value=7e-24 Score=160.48 Aligned_cols=177 Identities=10% Similarity=0.146 Sum_probs=138.5
Q ss_pred cccccccceeeeeee--------------ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee
Q psy13207 6 LQSEKCLNQWTRRSN--------------LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV 71 (197)
Q Consensus 6 ~~~~~~~~~w~~~~~--------------~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~ 71 (197)
+..++.+++|++... +.+|...|.+++|+|++ +.+|++++.||.|++||+++.+.+..+......
T Consensus 132 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~~~~~dg~v~iwd~~~~~~~~~~~~~~~~ 210 (416)
T 2pm9_A 132 GGNNGEIFIWDMNKCTESPSNYTPLTPGQSMSSVDEVISLAWNQSL-AHVFASAGSSNFASIWDLKAKKEVIHLSYTSPN 210 (416)
T ss_dssp ECSSSCEEBCBTTTTSSCTTTCCCBCCCCSCCSSCCCCEEEECSSC-TTEEEEESSSSCEEEEETTTTEEEEEECCCCCS
T ss_pred EcCCCeEEEEECCCCccccccccccccccccCCCCCeeEEEeCCCC-CcEEEEEcCCCCEEEEECCCCCcceEEeccccc
Confidence 356788999986431 25689999999999973 578999999999999999987655443322111
Q ss_pred cc-CCCeeeEEEccCCC-cccc--------eeEEEEeeE------ecc-cCCCceeEEEEcC-CCeEEEEeeCCCeEEEE
Q psy13207 72 AC-PTLASCLTWNHSFS-RFNS--------ISIMYEAHS------INA-EHKDLIHDVAYDY-YGLRMATCSSDQNIKVT 133 (197)
Q Consensus 72 ~~-~~~~~~~~~~~~~~-~~~~--------~~~~~~~~~------~~~-~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~ 133 (197)
.. ...+.+++|+|++. .+++ .+++||+.. ... +|...|.+++|++ +.-+|++++.|+.|++|
T Consensus 211 ~~~~~~v~~~~~~~~~~~~l~~~~~d~~~~~i~~~d~~~~~~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~dg~v~~w 290 (416)
T 2pm9_A 211 SGIKQQLSVVEWHPKNSTRVATATGSDNDPSILIWDLRNANTPLQTLNQGHQKGILSLDWCHQDEHLLLSSGRDNTVLLW 290 (416)
T ss_dssp SCCCCCEEEEEECSSCTTEEEEEECCSSSCCCCEEETTSTTSCSBCCCSCCSSCEEEEEECSSCSSCEEEEESSSEEEEE
T ss_pred cccCCceEEEEECCCCCCEEEEEECCCCCceEEEEeCCCCCCCcEEeecCccCceeEEEeCCCCCCeEEEEeCCCCEEEe
Confidence 11 56799999999985 4433 478999222 112 5888999999984 44444999999999999
Q ss_pred EccCCcccceeeeeeecCceecEEEEEEccCC-CEEEEEeCCCcEEEEEcCCCcch
Q psy13207 134 RDVMGTRFDIETIGNFEDHYCTVWRVSWNITG-TIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 134 d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~-~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
|+++ .+.+..+.+|...|.+++|+|++ ++|++++.||.|++||+......
T Consensus 291 d~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~~l~s~~~d~~i~iw~~~~~~~~ 341 (416)
T 2pm9_A 291 NPES-----AEQLSQFPARGNWCFKTKFAPEAPDLFACASFDNKIEVQTLQNLTNT 341 (416)
T ss_dssp CSSS-----CCEEEEEECSSSCCCCEEECTTCTTEEEECCSSSEEEEEESCCCCCS
T ss_pred eCCC-----CccceeecCCCCceEEEEECCCCCCEEEEEecCCcEEEEEccCCCCC
Confidence 9977 67788888999999999999998 89999999999999999876643
No 87
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=3.7e-24 Score=176.62 Aligned_cols=164 Identities=12% Similarity=0.129 Sum_probs=122.9
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee------ccCCCeeeEEEccCCCcccce--
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV------ACPTLASCLTWNHSFSRFNSI-- 92 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~------~~~~~~~~~~~~~~~~~~~~~-- 92 (197)
+.+|...+..++|+|+ +++|+||+.|++|++||+.++.......+...+ .+...|.+++|+|++++|+++
T Consensus 431 l~G~~~~v~sv~~spd--g~~laSgs~DgtVrlWd~~~g~~~~~~~~~~~l~~~~~~~h~~~V~svafspdg~~LAsgs~ 508 (902)
T 2oaj_A 431 LKGGVRTKRQKLPAEY--GTAFITGHSNGSVRIYDASHGDIQDNASFEVNLSRTLNKAKELAVDKISFAAETLELAVSIE 508 (902)
T ss_dssp CCCSBCCCCCCCCCSE--EEEEEEEETTSEEEEEESSCCTTTTTBCEEEEHHHHTTCSSSCCEEEEEEETTTTEEEEEET
T ss_pred ccCCcCCCCccccccc--CcEEEEecCCCcEEEEECCCccccCCceEEeechhhcCCCCCCceeEEEecCCCCeEEEEec
Confidence 4556666667777898 999999999999999999887421100000011 235789999999999999877
Q ss_pred ---eEEEEee---------------------------------------------------EecccCCCceeEEEEcCCC
Q psy13207 93 ---SIMYEAH---------------------------------------------------SINAEHKDLIHDVAYDYYG 118 (197)
Q Consensus 93 ---~~~~~~~---------------------------------------------------~~~~~~~~~i~~~~~~~~~ 118 (197)
+++|++. .+. +|...|++++|+++.
T Consensus 509 DgtV~lwd~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~l~-~h~~~V~svafSpdG 587 (902)
T 2oaj_A 509 TGDVVLFKYEVNQFYSVENRPESGDLEMNFRRFSLNNTNGVLVDVRDRAPTGVRQGFMPSTAVH-ANKGKTSAINNSNIG 587 (902)
T ss_dssp TSCEEEEEEEECCC---------------CCSCCGGGSSCSEEECGGGCCTTCSEEEEEEEEEC-CCSCSEEEEEECBTS
T ss_pred CcEEEEEEecCccccCccccCCCcccceeeeeccccCCccccccccccCCCCCCCccceeEEEE-cCCCcEEEEEecCCc
Confidence 7999943 234 689999999999666
Q ss_pred eEEEEeeCCCeEEEEEccCCcccceeeeeeec-CceecEEEEEEc-----cCC---CEEEEEeCCCcEEEEEc---CCCc
Q psy13207 119 LRMATCSSDQNIKVTRDVMGTRFDIETIGNFE-DHYCTVWRVSWN-----ITG---TIVASSGDDGCVRLWKL---KKKR 186 (197)
Q Consensus 119 ~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~-~h~~~v~~~~~~-----p~~---~~l~~~~~dg~i~iw~~---~~~~ 186 (197)
+||+|+.|++|++||+++........+..+. +|...|++++|+ ||| ++|++|+.|++|++||+ .+++
T Consensus 588 -~lAsgs~D~tv~lwd~~~~~~~~~~~~~~~~~gh~~~V~sv~Fs~~~~~~Dg~~~~~l~sgs~D~tv~~wd~~p~~~g~ 666 (902)
T 2oaj_A 588 -FVGIAYAAGSLMLIDRRGPAIIYMENIREISGAQSACVTCIEFVIMEYGDDGYSSILMVCGTDMGEVITYKILPASGGK 666 (902)
T ss_dssp -EEEEEETTSEEEEEETTTTEEEEEEEGGGTCSSCCCCEEEEEEEEEECTTSSSEEEEEEEEETTSEEEEEEEEECGGGC
T ss_pred -EEEEEeCCCcEEEEECCCCeEEEEeehhHhccccccceEEEEEEEEecCCCCCcceEEEEEecCCcEEEEEEecCCCCc
Confidence 6699999999999998762111000112344 899999999999 885 89999999999999999 5544
Q ss_pred ch
Q psy13207 187 KK 188 (197)
Q Consensus 187 ~~ 188 (197)
..
T Consensus 667 ~~ 668 (902)
T 2oaj_A 667 FD 668 (902)
T ss_dssp EE
T ss_pred EE
Confidence 33
No 88
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.92 E-value=1.8e-23 Score=160.57 Aligned_cols=158 Identities=12% Similarity=0.109 Sum_probs=128.3
Q ss_pred cCCCcceeEEEECCCCCCcEE-EEEeCCCcEEEEEcC--CcccccceeccceeccCCCeeeEEEccCCCcccce-----e
Q psy13207 22 VDSRTSVTDVKFGPKQLGLVL-ATCAADGLVRIYEAP--DVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----S 93 (197)
Q Consensus 22 ~~h~~~v~~~~~~~~~~~~~l-~s~~~dg~v~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 93 (197)
.+|.+.|.+++|+|+ +++| ++++.||.|++||+. +++.+..+.. ......+.+++|+|++.+++++ +
T Consensus 99 ~~~~~~v~~~~~s~d--~~~l~~~~~~dg~v~iwd~~~~~~~~~~~~~~---~~~~~~v~~~~~sp~~~~l~~~~~~g~v 173 (450)
T 2vdu_B 99 PPIYSYIRNLRLTSD--ESRLIACADSDKSLLVFDVDKTSKNVLKLRKR---FCFSKRPNAISIAEDDTTVIIADKFGDV 173 (450)
T ss_dssp -CCCCCEEEEEECTT--SSEEEEEEGGGTEEEEEEECSSSSSCEEEEEE---EECSSCEEEEEECTTSSEEEEEETTSEE
T ss_pred CccCCceEEEEEcCC--CCEEEEEECCCCeEEEEECcCCCCceeeeeec---ccCCCCceEEEEcCCCCEEEEEeCCCcE
Confidence 467778999999999 8885 899999999999998 6654433221 1225789999999999998876 6
Q ss_pred EEEE------ee----EecccCCCceeEEEEcCC---CeEEEEeeCCCeEEEEEccCCcccceeeeee-ecCceecEEEE
Q psy13207 94 IMYE------AH----SINAEHKDLIHDVAYDYY---GLRMATCSSDQNIKVTRDVMGTRFDIETIGN-FEDHYCTVWRV 159 (197)
Q Consensus 94 ~~~~------~~----~~~~~~~~~i~~~~~~~~---~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~-~~~h~~~v~~~ 159 (197)
++|+ .. .+. +|...|.+++|+++ .-+|++++.|+.|++||+++ ...+.. +.+|...|.++
T Consensus 174 ~~~~~~~~~~~~~~~~~~~-~h~~~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~-----~~~~~~~~~~h~~~v~~~ 247 (450)
T 2vdu_B 174 YSIDINSIPEEKFTQEPIL-GHVSMLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQ-----CFIVDKWLFGHKHFVSSI 247 (450)
T ss_dssp EEEETTSCCCSSCCCCCSE-ECSSCEEEEEEEECTTSCEEEEEEETTSCEEEEEESC-----TTCEEEECCCCSSCEEEE
T ss_pred EEEecCCcccccccceeee-cccCceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCC-----CceeeeeecCCCCceEEE
Confidence 7787 21 445 78999999999977 55559999999999999976 444554 56899999999
Q ss_pred EEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 160 SWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 160 ~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
+|+ ++++|++++.|++|++||+++++....+
T Consensus 248 ~~s-d~~~l~s~~~d~~v~vwd~~~~~~~~~~ 278 (450)
T 2vdu_B 248 CCG-KDYLLLSAGGDDKIFAWDWKTGKNLSTF 278 (450)
T ss_dssp EEC-STTEEEEEESSSEEEEEETTTCCEEEEE
T ss_pred EEC-CCCEEEEEeCCCeEEEEECCCCcEeeee
Confidence 999 9999999999999999999988755444
No 89
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.91 E-value=1.2e-22 Score=153.08 Aligned_cols=169 Identities=13% Similarity=0.193 Sum_probs=134.1
Q ss_pred ccccceeeee-----eeecCCCcceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccce--------eccC
Q psy13207 9 EKCLNQWTRR-----SNLVDSRTSVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHE--------VACP 74 (197)
Q Consensus 9 ~~~~~~w~~~-----~~~~~h~~~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~--------~~~~ 74 (197)
+..+++|+.. ..+.+|.++|.+++|+| + +++|++|+.||.|++||+.+......+..... ..+.
T Consensus 22 ~~~~~v~~~~~~~~~~~~~~h~~~v~~~~~s~~~--~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (408)
T 4a11_B 22 ESTRRVLGLELNKDRDVERIHGGGINTLDIEPVE--GRYMLSGGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHR 99 (408)
T ss_dssp HHHHHHHTEEECTTEEECCCCSSCEEEEEECTTT--CCEEEEEETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCS
T ss_pred cCcceeeccccCcceeeeeccCCcEEEEEEecCC--CCEEEEEcCCCeEEEEECCCCcccceEeccccccccccccccCC
Confidence 4456677654 34778999999999999 8 99999999999999999998765544432111 0146
Q ss_pred CCeeeEEEcc-CCCcccce-----eEEEE------eeEecccCCCceeEEEEcC---CCeEEEEeeCCCeEEEEEccCCc
Q psy13207 75 TLASCLTWNH-SFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDY---YGLRMATCSSDQNIKVTRDVMGT 139 (197)
Q Consensus 75 ~~~~~~~~~~-~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~---~~~~~~s~~~d~~i~~~d~~~~~ 139 (197)
..|.+++|+| ++..++++ +++|+ +..+ .+...+.++.|++ +..++++++.|+.|++||+++
T Consensus 100 ~~v~~~~~~~~~~~~l~s~~~d~~i~iwd~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~-- 175 (408)
T 4a11_B 100 YSVETVQWYPHDTGMFTSSSFDKTLKVWDTNTLQTADVF--NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKS-- 175 (408)
T ss_dssp SCEEEEEECTTCTTCEEEEETTSEEEEEETTTTEEEEEE--ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSS--
T ss_pred CcEEEEEEccCCCcEEEEEeCCCeEEEeeCCCCccceec--cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCC--
Confidence 7899999999 66666554 89999 2233 3677899999982 333449999999999999976
Q ss_pred ccceeeeeeecCceecEEEEEEccCCC-EEEEEeCCCcEEEEEcCCCc
Q psy13207 140 RFDIETIGNFEDHYCTVWRVSWNITGT-IVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 140 ~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~~~~~dg~i~iw~~~~~~ 186 (197)
...+..+.+|...|.+++|+|+++ +|++++.||.|++||+++..
T Consensus 176 ---~~~~~~~~~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i~d~~~~~ 220 (408)
T 4a11_B 176 ---GSCSHILQGHRQEILAVSWSPRYDYILATASADSRVKLWDVRRAS 220 (408)
T ss_dssp ---SCCCEEECCCCSCEEEEEECSSCTTEEEEEETTSCEEEEETTCSS
T ss_pred ---cceeeeecCCCCcEEEEEECCCCCcEEEEEcCCCcEEEEECCCCC
Confidence 566778889999999999999998 58999999999999998754
No 90
>3jro_A Fusion protein of protein transport protein SEC13 nucleoporin NUP145; protein complex, cytoplasmic vesicle, endoplasmic reticulum, transport, membrane, mRNA transport; 4.00A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2e-23 Score=169.60 Aligned_cols=181 Identities=22% Similarity=0.311 Sum_probs=142.1
Q ss_pred cccccccceeeee-------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 6 LQSEKCLNQWTRR-------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
+..|+.+++|++. ..+.+|..+|.+++|+|+..+..+++|+.||.|++||+.+......... ..+...+.
T Consensus 73 ~s~Dg~I~vwd~~~~~~~~~~~~~~h~~~V~~v~~sp~~~~~~l~sgs~dg~I~vwdl~~~~~~~~~~~---~~~~~~v~ 149 (753)
T 3jro_A 73 CSYDGKVLIWKEENGRWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVEFKENGTTSPIII---DAHAIGVN 149 (753)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECCCSSCEEEEEECCGGGCSEEEEEETTSEEEEEECCSSSCCCCEEE---ECCSSCEE
T ss_pred EeCCCeEEEEECCCCcccccccccCCCCCeEEEEECCCCCCCEEEEEeCCCcEEEEEeecCCCcceeEe---ecCCCceE
Confidence 4678999999865 3467899999999999963367899999999999999987744322211 12367899
Q ss_pred eEEEcc-------------CCCcccce-----eEEEE----------eeEecccCCCceeEEEEcCC---CeEEEEeeCC
Q psy13207 79 CLTWNH-------------SFSRFNSI-----SIMYE----------AHSINAEHKDLIHDVAYDYY---GLRMATCSSD 127 (197)
Q Consensus 79 ~~~~~~-------------~~~~~~~~-----~~~~~----------~~~~~~~~~~~i~~~~~~~~---~~~~~s~~~d 127 (197)
++.|+| ++..++++ +++|| ...+. +|...|.+++|+|+ .-.|++++.|
T Consensus 150 ~l~~~p~~~~~~~~~~~~~d~~~l~sgs~dg~I~iwd~~~~~~~~~~~~~~~-~h~~~V~~l~~sp~~~~~~~l~s~s~D 228 (753)
T 3jro_A 150 SASWAPATIEEDGEHNGTKESRKFVTGGADNLVKIWKYNSDAQTYVLESTLE-GHSDWVRDVAWSPTVLLRSYLASVSQD 228 (753)
T ss_dssp EEEECCCC---------CGGGCCEEEEETTSCEEEEEEETTTTEEEEEEEEC-CCSSCEEEEEECCCCSSSEEEEEEESS
T ss_pred EEEecCcccccccccccCCCCCEEEEEECCCeEEEEeccCCcccceeeeeec-CCCCcEEEEEeccCCCCCCEEEEEecC
Confidence 999999 47777665 79998 34555 79999999999976 5566999999
Q ss_pred CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 128 QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 128 ~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
|.|++||+++..............|...|++++|+|+|+++++++.||.|++|+++..+.+..
T Consensus 229 g~I~iwd~~~~~~~~~~~~~~~~~~~~~v~~l~~spdg~~l~s~s~Dg~I~vwd~~~~~~~~~ 291 (753)
T 3jro_A 229 RTCIIWTQDNEQGPWKKTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLWKENLEGKWEP 291 (753)
T ss_dssp SCEEEEEESSSSSCCBCCBSSSSCCSSCCCCEEECTTTCCEEEECSSSCEECCBCCSSSCCBC
T ss_pred CEEEEecCCCCCCcceeEEeccCCCCCceEEEEEcCCCCEEEEEcCCCEEEEEecCCCCCccc
Confidence 999999998632211223444556888999999999999999999999999999987655443
No 91
>1k8k_C P40, ARP2/3 complex 41 kDa subunit, P41-ARC; beta-propeller, structural protein; 2.00A {Bos taurus} SCOP: b.69.4.1 PDB: 1tyq_C* 1u2v_C* 2p9i_C* 2p9k_C* 2p9l_C 2p9n_C* 2p9p_C* 2p9s_C* 2p9u_C* 3rse_C 3dxm_C* 3dxk_C
Probab=99.91 E-value=8e-23 Score=152.47 Aligned_cols=169 Identities=12% Similarity=0.178 Sum_probs=136.1
Q ss_pred cccccccceeeeee-------eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 6 LQSEKCLNQWTRRS-------NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-------~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
+..++.+++|++.. .+..|...|.+++|+|+ +++|++++.|+.|++||+.......... .....+...+.
T Consensus 70 ~~~dg~i~vwd~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~l~~~~~d~~v~i~d~~~~~~~~~~~-~~~~~~~~~i~ 146 (372)
T 1k8k_C 70 CGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPN--EKKFAVGSGSRVISICYFEQENDWWVCK-HIKKPIRSTVL 146 (372)
T ss_dssp EETTSCEEEEEEETTEEEEEEECCCCSSCEEEEEECTT--SSEEEEEETTSSEEEEEEETTTTEEEEE-EECTTCCSCEE
T ss_pred EcCCCeEEEEECCCCeeeeeEEeecCCCceeEEEECCC--CCEEEEEeCCCEEEEEEecCCCcceeee-eeecccCCCee
Confidence 35678999998753 24679999999999998 9999999999999999998765311111 00112267899
Q ss_pred eEEEccCCCcccce-----eEEEEe------------------------eEecccCCCceeEEEEcCCCeEEEEeeCCCe
Q psy13207 79 CLTWNHSFSRFNSI-----SIMYEA------------------------HSINAEHKDLIHDVAYDYYGLRMATCSSDQN 129 (197)
Q Consensus 79 ~~~~~~~~~~~~~~-----~~~~~~------------------------~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~ 129 (197)
+++|+|++.+++++ +++||+ ..+. .|...|.+++|+++.-+|++++.|+.
T Consensus 147 ~~~~~~~~~~l~~~~~dg~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~~~~~d~~ 225 (372)
T 1k8k_C 147 SLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESS-SSCGWVHGVCFSANGSRVAWVSHDST 225 (372)
T ss_dssp EEEECTTSSEEEEEETTSCEEEEECCCTTTSCCCCCBTTBSCCCTTCEEEECC-CCSSCEEEEEECSSSSEEEEEETTTE
T ss_pred EEEEcCCCCEEEEEcCCCCEEEEEcccccccccccccccccccchhhheEecC-CCCCeEEEEEECCCCCEEEEEeCCCE
Confidence 99999999988765 799983 2334 68889999999944434499999999
Q ss_pred EEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 130 IKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 130 i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
|++||+++ .+.+..+..|...|.+++|+|++++++++ .|+.|++|+++.
T Consensus 226 i~i~d~~~-----~~~~~~~~~~~~~v~~~~~~~~~~~l~~~-~d~~i~i~~~~~ 274 (372)
T 1k8k_C 226 VCLADADK-----KMAVATLASETLPLLAVTFITESSLVAAG-HDCFPVLFTYDS 274 (372)
T ss_dssp EEEEEGGG-----TTEEEEEECSSCCEEEEEEEETTEEEEEE-TTSSCEEEEEET
T ss_pred EEEEECCC-----CceeEEEccCCCCeEEEEEecCCCEEEEE-eCCeEEEEEccC
Confidence 99999976 56778888899999999999999988887 899999999987
No 92
>3i2n_A WD repeat-containing protein 92; WD40 repeats, structural genomics, structural genomic consortium, SGC, apoptosis, transcription; 1.95A {Homo sapiens}
Probab=99.91 E-value=3.6e-23 Score=153.43 Aligned_cols=177 Identities=12% Similarity=0.127 Sum_probs=132.7
Q ss_pred cccccccceeeee------eeecCCCcceeEEEE------CCCCCCcEEEEEeCCCcEEEEEcCCcc-cccceeccceec
Q psy13207 6 LQSEKCLNQWTRR------SNLVDSRTSVTDVKF------GPKQLGLVLATCAADGLVRIYEAPDVM-NLSQWCLQHEVA 72 (197)
Q Consensus 6 ~~~~~~~~~w~~~------~~~~~h~~~v~~~~~------~~~~~~~~l~s~~~dg~v~iw~~~~~~-~~~~~~~~~~~~ 72 (197)
+..++.+++|++. ..+.+|...|.++.| +|+ +++|++++.||.|++||+.+.+ ....+... .-.
T Consensus 86 ~~~dg~i~iwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~s~~--~~~l~~~~~d~~i~vwd~~~~~~~~~~~~~~-~~~ 162 (357)
T 3i2n_A 86 GDFGGNLHIWNLEAPEMPVYSVKGHKEIINAIDGIGGLGIGEG--APEIVTGSRDGTVKVWDPRQKDDPVANMEPV-QGE 162 (357)
T ss_dssp EETTSCEEEECTTSCSSCSEEECCCSSCEEEEEEESGGGCC-C--CCEEEEEETTSCEEEECTTSCSSCSEEECCC-TTS
T ss_pred ecCCCeEEEEeCCCCCccEEEEEecccceEEEeeccccccCCC--ccEEEEEeCCCeEEEEeCCCCCCcceecccc-CCC
Confidence 4568899999754 357889999999965 677 8999999999999999998875 22222211 001
Q ss_pred cCCCeeeEE----EccCCCcccce-----eEEEE-----eeEecccCCCceeEEEEcC---CCeEEEEeeCCCeEEEEEc
Q psy13207 73 CPTLASCLT----WNHSFSRFNSI-----SIMYE-----AHSINAEHKDLIHDVAYDY---YGLRMATCSSDQNIKVTRD 135 (197)
Q Consensus 73 ~~~~~~~~~----~~~~~~~~~~~-----~~~~~-----~~~~~~~~~~~i~~~~~~~---~~~~~~s~~~d~~i~~~d~ 135 (197)
....+.++. |+|++.+++++ +++|| ..... .|...|.+++|++ +.-.|++++.|+.|++||+
T Consensus 163 ~~~~v~~~~~~~~~~~~~~~l~~~~~d~~i~i~d~~~~~~~~~~-~~~~~v~~~~~~~~~~~~~~l~~~~~dg~i~i~d~ 241 (357)
T 3i2n_A 163 NKRDCWTVAFGNAYNQEERVVCAGYDNGDIKLFDLRNMALRWET-NIKNGVCSLEFDRKDISMNKLVATSLEGKFHVFDM 241 (357)
T ss_dssp CCCCEEEEEEECCCC-CCCEEEEEETTSEEEEEETTTTEEEEEE-ECSSCEEEEEESCSSSSCCEEEEEESTTEEEEEEE
T ss_pred CCCceEEEEEEeccCCCCCEEEEEccCCeEEEEECccCceeeec-CCCCceEEEEcCCCCCCCCEEEEECCCCeEEEEeC
Confidence 134788888 78899888765 79999 33334 6889999999996 5555599999999999999
Q ss_pred cCCcccceeeeeeecCceecEEEEEEccCCC-EEEEEeCCCcEEEEEcCCCc
Q psy13207 136 VMGTRFDIETIGNFEDHYCTVWRVSWNITGT-IVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 136 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~~~~~dg~i~iw~~~~~~ 186 (197)
++...........+.+|...|.+++|+|+++ +|++++.||.|++||++...
T Consensus 242 ~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~iwd~~~~~ 293 (357)
T 3i2n_A 242 RTQHPTKGFASVSEKAHKSTVWQVRHLPQNRELFLTAGGAGGLHLWKYEYPI 293 (357)
T ss_dssp EEEETTTEEEEEEEECCSSCEEEEEEETTEEEEEEEEETTSEEEEEEEECCS
T ss_pred cCCCcccceeeeccCCCcCCEEEEEECCCCCcEEEEEeCCCcEEEeecCCCc
Confidence 7622111112223448999999999999998 89999999999999998654
No 93
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.91 E-value=3.1e-24 Score=162.30 Aligned_cols=172 Identities=8% Similarity=0.035 Sum_probs=117.7
Q ss_pred cccccccceeeeee----------eecCCCcceeEEEECC--------CCCCcEEEEEeCCCcEEEEEcCCcccccceec
Q psy13207 6 LQSEKCLNQWTRRS----------NLVDSRTSVTDVKFGP--------KQLGLVLATCAADGLVRIYEAPDVMNLSQWCL 67 (197)
Q Consensus 6 ~~~~~~~~~w~~~~----------~~~~h~~~v~~~~~~~--------~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~ 67 (197)
+..|+++++|+... .+.+|.+.|++++|+| + +++||||+.|++|+|||+.+.....
T Consensus 107 ~~~d~~v~lw~~~~~~~~~~~~~~~~~gH~~~v~~v~~~p~~~~~~~~d--~~~las~s~D~tv~~Wd~~~~~~~~---- 180 (393)
T 4gq1_A 107 VCQDNTVRLIITKNETIITQHVLGGKSGHHNFVNDIDIADVYSADNRLA--EQVIASVGDDCTLIIWRLTDEGPIL---- 180 (393)
T ss_dssp EETTSCEEEEEEETTEEEEEEEECTTTSCSSCEEEEEEEEEECTTCSEE--EEEEEEEETTSEEEEEEEETTEEEE----
T ss_pred EeCCCcEEEEECCCCccceeeeecccCCCCCceEEEEEccccccccCCC--CCEEEEEECCCeEEEEECCCCceee----
Confidence 45789999998642 3679999999999998 6 8899999999999999998765332
Q ss_pred cceeccCCCeeeEEEccCCC-cccce-----eEEEEee-------------------------------EecccCCCcee
Q psy13207 68 QHEVACPTLASCLTWNHSFS-RFNSI-----SIMYEAH-------------------------------SINAEHKDLIH 110 (197)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~~~-------------------------------~~~~~~~~~i~ 110 (197)
....+...+.+++|+|++. +++++ +++||+. ... +|...+.
T Consensus 181 -~~~~~~~~v~~v~~~p~~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~~~~~~~~~~~~~-~~~~~v~ 258 (393)
T 4gq1_A 181 -AGYPLSSPGISVQFRPSNPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTLNTLPLVNTCHSS-GIASSLA 258 (393)
T ss_dssp -EEEECSSCEEEEEEETTEEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEEESGGGC-------CCSSSCS
T ss_pred -eecCCCCCcEEEEECCCCCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEecccccceeeeecc-cccccce
Confidence 2233467899999999885 56554 8999911 112 5777889
Q ss_pred EEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEE------------------EEEcc--CCCEEE
Q psy13207 111 DVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWR------------------VSWNI--TGTIVA 169 (197)
Q Consensus 111 ~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~------------------~~~~p--~~~~l~ 169 (197)
++.|. ++.-++++++.|+.+++||+.. ......+..|...+.. ..|+| ++.+++
T Consensus 259 ~v~~~~~dg~~l~s~s~d~~i~vwd~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 333 (393)
T 4gq1_A 259 NVRWIGSDGSGILAMCKSGAWLRWNLFA-----NNDYNEISDSTMKLGPKNLLPNVQGISLFPSLLGACPHPRYMDYFAT 333 (393)
T ss_dssp EEEEETTTTCEEEEECTTSEEEEEEC------------------------CCSCSEEEECSSCCSSCCEECSSCTTEEEE
T ss_pred eeeeecCCCCEEEEEeCCCCEEEEECcc-----CCCCceEeeecCccccEEEccccccccccCcceeEEEccCCCCEEEE
Confidence 99997 4444459999999999999975 2223333333333332 23333 344677
Q ss_pred EEeCCCcEEEEEcCCCcchhh
Q psy13207 170 SSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 170 ~~~~dg~i~iw~~~~~~~~~~ 190 (197)
+|+.||+|++||+.+++....
T Consensus 334 sgs~Dg~V~lwd~~~~~~~~~ 354 (393)
T 4gq1_A 334 AHSQHGLIQLINTYEKDSNSI 354 (393)
T ss_dssp EETTTTEEEEEETTCTTCCEE
T ss_pred EECCCCEEEEEECCCCcEEEE
Confidence 888999999999988765543
No 94
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.91 E-value=5.5e-23 Score=162.54 Aligned_cols=175 Identities=17% Similarity=0.151 Sum_probs=140.9
Q ss_pred ccccceeeee---------eeecCCCcc-eeEEEECC--CCCCcEEEEEeCCCcEEEEEcCCccccc--ceeccceec-c
Q psy13207 9 EKCLNQWTRR---------SNLVDSRTS-VTDVKFGP--KQLGLVLATCAADGLVRIYEAPDVMNLS--QWCLQHEVA-C 73 (197)
Q Consensus 9 ~~~~~~w~~~---------~~~~~h~~~-v~~~~~~~--~~~~~~l~s~~~dg~v~iw~~~~~~~~~--~~~~~~~~~-~ 73 (197)
++.+++|++. ..+.+|... |.+++|+| + +++|++++.||+|++||+.+++... .......+. +
T Consensus 38 ~~~v~v~~~~~~~~~~~~~~~~~~h~~~~v~~~~~sp~~~--~~~l~s~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~ 115 (615)
T 1pgu_A 38 GKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKG--SQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVL 115 (615)
T ss_dssp TTEEEEEECCSSCCSSCSEEEECTTTTSCEEEEEECSSTT--CCEEEEEETTSEEEEEEEEEEGGGTEEEEEEEEEEECC
T ss_pred CCeEEEEECCCCCCccccceEEecCCCceEEEEEECcCCC--CCEEEEecCCCEEEEEeCCCCcccccccccccchhhcc
Confidence 5677888754 347789999 99999999 8 9999999999999999997541111 011122222 3
Q ss_pred CCCeeeEEEccCCCcccce---------eEEEE----eeEecccCCCceeEEEEcCCCe-EEEEeeCCCeEEEEEccCCc
Q psy13207 74 PTLASCLTWNHSFSRFNSI---------SIMYE----AHSINAEHKDLIHDVAYDYYGL-RMATCSSDQNIKVTRDVMGT 139 (197)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~---------~~~~~----~~~~~~~~~~~i~~~~~~~~~~-~~~s~~~d~~i~~~d~~~~~ 139 (197)
...+.+++|+|++++++++ +.+|+ +..+. +|...|.+++|+++.- ++++++.|+.|++||.++
T Consensus 116 ~~~v~~~~~s~~~~~l~~~~~~~~~~~~v~~~d~~~~~~~~~-~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~-- 192 (615)
T 1pgu_A 116 AGPISDISWDFEGRRLCVVGEGRDNFGVFISWDSGNSLGEVS-GHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPP-- 192 (615)
T ss_dssp SSCEEEEEECTTSSEEEEEECCSSCSEEEEETTTCCEEEECC-SCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTT--
T ss_pred cccEEEEEEeCCCCEEEEeccCCCCccEEEEEECCCcceeee-cCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCC--
Confidence 6789999999999988643 56666 66667 8999999999994431 349999999999999976
Q ss_pred ccceeeeeeecCcee---cEEEEEEccC-CCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 140 RFDIETIGNFEDHYC---TVWRVSWNIT-GTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 140 ~~~~~~~~~~~~h~~---~v~~~~~~p~-~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
.+.+..+.+|.. .|.+++|+|+ +++|++++.||.|++||+++++....+
T Consensus 193 ---~~~~~~~~~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~~~~ 245 (615)
T 1pgu_A 193 ---FKFSASDRTHHKQGSFVRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYI 245 (615)
T ss_dssp ---BEEEEEECSSSCTTCCEEEEEECSTTCCEEEEEETTCCEEEEETTTCCEEEEC
T ss_pred ---cceeeeecccCCCCceEEEEEECCCCCCEEEEEeCCCeEEEEECCCCCEeEEe
Confidence 677888899999 9999999999 999999999999999999987766555
No 95
>3dwl_C Actin-related protein 2/3 complex subunit 1; propellor, actin-binding, ATP-binding, cytoskeleton, nucleot binding, WD repeat; HET: ATP; 3.78A {Schizosaccharomyces pombe}
Probab=99.91 E-value=1.1e-23 Score=157.74 Aligned_cols=151 Identities=13% Similarity=0.147 Sum_probs=120.3
Q ss_pred cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCc--ccccceeccceeccCCCeeeEEEccCCCcccce-----eE
Q psy13207 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDV--MNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SI 94 (197)
Q Consensus 22 ~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 94 (197)
..+.++|++++|+|+ +++|++|+.|+.|++||+.++ +....+. .+...|.+++|+|++++++++ ++
T Consensus 8 ~~~~~~v~~~~~s~~--g~~l~~~~~d~~i~iw~~~~~~~~~~~~~~-----~h~~~v~~~~~s~~~~~l~s~s~d~~v~ 80 (377)
T 3dwl_C 8 HILPKPSYEHAFNSQ--RTEFVTTTATNQVELYEQDGNGWKHARTFS-----DHDKIVTCVDWAPKSNRIVTCSQDRNAY 80 (377)
T ss_dssp EECSSCCSCCEECSS--SSEEECCCSSSCBCEEEEETTEEEECCCBC-----CCSSCEEEEEECTTTCCEEEEETTSSEE
T ss_pred ecCCCcEEEEEECCC--CCEEEEecCCCEEEEEEccCCceEEEEEEe-----cCCceEEEEEEeCCCCEEEEEeCCCeEE
Confidence 346779999999998 999999999999999999876 3322221 236789999999999998776 79
Q ss_pred EEEe---------eEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC-ceecEEEEEEc
Q psy13207 95 MYEA---------HSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED-HYCTVWRVSWN 162 (197)
Q Consensus 95 ~~~~---------~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~-h~~~v~~~~~~ 162 (197)
+|++ ..+. .|...|.+++|+ ++.+ ++++.|+.|++||+++... ......+.. |...|.+++|+
T Consensus 81 vwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l--~~~~~d~~i~iwd~~~~~~--~~~~~~~~~~h~~~v~~~~~~ 155 (377)
T 3dwl_C 81 VYEKRPDGTWKQTLVLL-RLNRAATFVRWSPNEDKF--AVGSGARVISVCYFEQEND--WWVSKHLKRPLRSTILSLDWH 155 (377)
T ss_dssp EC------CCCCEEECC-CCSSCEEEEECCTTSSCC--EEEESSSCEEECCC-------CCCCEEECSSCCSCEEEEEEC
T ss_pred EEEcCCCCceeeeeEec-ccCCceEEEEECCCCCEE--EEEecCCeEEEEEECCccc--ceeeeEeecccCCCeEEEEEc
Confidence 9992 2234 789999999999 5566 9999999999999976211 113566666 99999999999
Q ss_pred cCCCEEEEEeCCCcEEEEEcCC
Q psy13207 163 ITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 163 p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
|++++|++++.|+.|++||++.
T Consensus 156 ~~~~~l~~~~~d~~i~iwd~~~ 177 (377)
T 3dwl_C 156 PNNVLLAAGCADRKAYVLSAYV 177 (377)
T ss_dssp TTSSEEEEEESSSCEEEEEECC
T ss_pred CCCCEEEEEeCCCEEEEEEEEe
Confidence 9999999999999999999863
No 96
>2oaj_A Protein SNI1; WD40 repeat, beta propeller, endocytosis/exocytosis complex; 2.40A {Saccharomyces cerevisiae}
Probab=99.91 E-value=2.2e-23 Score=171.96 Aligned_cols=167 Identities=11% Similarity=0.088 Sum_probs=133.9
Q ss_pred cccccccceeeeee----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 6 LQSEKCLNQWTRRS----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 6 ~~~~~~~~~w~~~~----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
+..|+++++|+... ....|..+|.+++|+| +++|++++.|++|++||+.+++.+..+ .....|.+++
T Consensus 35 gs~Dg~I~lw~~~~~~~~~~~~~~~~V~~l~fsp---g~~L~S~s~D~~v~lWd~~~~~~~~~~------~~~~~V~~v~ 105 (902)
T 2oaj_A 35 ATVTGEVHIYGQQQVEVVIKLEDRSAIKEMRFVK---GIYLVVINAKDTVYVLSLYSQKVLTTV------FVPGKITSID 105 (902)
T ss_dssp EETTSEEEEECSTTCEEEEECSSCCCEEEEEEET---TTEEEEEETTCEEEEEETTTCSEEEEE------ECSSCEEEEE
T ss_pred EeCCCEEEEEeCCCcEEEEEcCCCCCEEEEEEcC---CCEEEEEECcCeEEEEECCCCcEEEEE------cCCCCEEEEE
Confidence 46788999997542 1235788999999999 448999999999999999987655433 2356899999
Q ss_pred EccCCCcccce-----eEEEEe-----------------eEecccCCCceeEEEEcCC-CeEEEEeeCCCeEEEEEccCC
Q psy13207 82 WNHSFSRFNSI-----SIMYEA-----------------HSINAEHKDLIHDVAYDYY-GLRMATCSSDQNIKVTRDVMG 138 (197)
Q Consensus 82 ~~~~~~~~~~~-----~~~~~~-----------------~~~~~~~~~~i~~~~~~~~-~~~~~s~~~d~~i~~~d~~~~ 138 (197)
|+|++++++++ +++||+ ..+. +|...|.+++|+|+ .-.+++|+.|+.| +||+++
T Consensus 106 ~sp~g~~l~sgs~dg~V~lwd~~~~~~~~~~i~~~~~~~~~~~-~h~~~V~sl~~sp~~~~~l~~g~~dg~v-lWd~~~- 182 (902)
T 2oaj_A 106 TDASLDWMLIGLQNGSMIVYDIDRDQLSSFKLDNLQKSSFFPA-ARLSPIVSIQWNPRDIGTVLISYEYVTL-TYSLVE- 182 (902)
T ss_dssp CCTTCSEEEEEETTSCEEEEETTTTEEEEEEECCHHHHHTCSS-SCCCCCCEEEEETTEEEEEEEECSSCEE-EEETTT-
T ss_pred ECCCCCEEEEEcCCCcEEEEECCCCccccceeccccccccccc-cCCCCeEEEEEccCCCCEEEEEeCCCcE-EEECCC-
Confidence 99999998876 899991 1224 68899999999963 2234899999999 999986
Q ss_pred cccceeeeeeecCc------------------eecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 139 TRFDIETIGNFEDH------------------YCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 139 ~~~~~~~~~~~~~h------------------~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
.+.+..+..| ...|.+++|+|+|++|++++.||+|++||+++++.+
T Consensus 183 ----~~~~~~~~~~~~~g~~~~~~~~~~~~~h~~~V~~v~fspdg~~lasgs~Dg~i~lWd~~~g~~~ 246 (902)
T 2oaj_A 183 ----NEIKQSFIYELPPFAPGGDFSEKTNEKRTPKVIQSLYHPNSLHIITIHEDNSLVFWDANSGHMI 246 (902)
T ss_dssp ----TEEEEEECCCBCTTCCCSTTCCCTTSCBCCCEEEEEECTTSSEEEEEETTCCEEEEETTTCCEE
T ss_pred ----CceEEEEecccCCcCCCcccccccccccCCCeEEEEEcCCCCEEEEEECCCeEEEEECCCCcEE
Confidence 4555555444 578999999999999999999999999999887654
No 97
>2aq5_A Coronin-1A; WD40 repeat, 7-bladed beta-propeller, structural protein; HET: CME; 1.75A {Mus musculus} PDB: 2b4e_A
Probab=99.91 E-value=1.9e-22 Score=152.56 Aligned_cols=172 Identities=13% Similarity=0.129 Sum_probs=133.7
Q ss_pred cccccccceeeeee------------eecCCCcceeEEEECCCCCC-cEEEEEeCCCcEEEEEcCCcccccceeccceec
Q psy13207 6 LQSEKCLNQWTRRS------------NLVDSRTSVTDVKFGPKQLG-LVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72 (197)
Q Consensus 6 ~~~~~~~~~w~~~~------------~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~ 72 (197)
+..|+.+++|++.. .+.+|...|.+++|+|+ + .+|++++.||.|++||+.+++.+..+.. ..
T Consensus 100 ~s~dg~v~vw~~~~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~--~~~~l~s~~~dg~i~iwd~~~~~~~~~~~~---~~ 174 (402)
T 2aq5_A 100 GSEDCTVMVWEIPDGGLVLPLREPVITLEGHTKRVGIVAWHPT--AQNVLLSAGCDNVILVWDVGTGAAVLTLGP---DV 174 (402)
T ss_dssp EETTSEEEEEECCTTCCSSCBCSCSEEEECCSSCEEEEEECSS--BTTEEEEEETTSCEEEEETTTTEEEEEECT---TT
T ss_pred EeCCCeEEEEEccCCCCccccCCceEEecCCCCeEEEEEECcC--CCCEEEEEcCCCEEEEEECCCCCccEEEec---CC
Confidence 45688999998642 46789999999999998 7 6999999999999999998765433210 12
Q ss_pred cCCCeeeEEEccCCCcccce-----eEEEE------eeEe-cccCCCc-eeEEEEcCCCeEEEEe---eCCCeEEEEEcc
Q psy13207 73 CPTLASCLTWNHSFSRFNSI-----SIMYE------AHSI-NAEHKDL-IHDVAYDYYGLRMATC---SSDQNIKVTRDV 136 (197)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~-~~~~~~~-i~~~~~~~~~~~~~s~---~~d~~i~~~d~~ 136 (197)
+...+.+++|+|++..++++ +++|| +..+ . .|... +.+++|+++.-+|++| +.|+.|++||++
T Consensus 175 ~~~~v~~~~~~~~~~~l~~~~~d~~i~iwd~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~l~~g~~~~~d~~i~iwd~~ 253 (402)
T 2aq5_A 175 HPDTIYSVDWSRDGALICTSCRDKRVRVIEPRKGTVVAEKDR-PHEGTRPVHAVFVSEGKILTTGFSRMSERQVALWDTK 253 (402)
T ss_dssp CCSCEEEEEECTTSSCEEEEETTSEEEEEETTTTEEEEEEEC-SSCSSSCCEEEECSTTEEEEEEECTTCCEEEEEEETT
T ss_pred CCCceEEEEECCCCCEEEEEecCCcEEEEeCCCCceeeeecc-CCCCCcceEEEEcCCCcEEEEeccCCCCceEEEEcCc
Confidence 36789999999999998766 89999 4455 4 67665 8999999655555888 789999999997
Q ss_pred CCcccceeeeee-ecCceecEEEEEEccCCCEEEE-EeCCCcEEEEEcCCCcc
Q psy13207 137 MGTRFDIETIGN-FEDHYCTVWRVSWNITGTIVAS-SGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 137 ~~~~~~~~~~~~-~~~h~~~v~~~~~~p~~~~l~~-~~~dg~i~iw~~~~~~~ 187 (197)
+.. ..+.. ...|...+.+++|+|++++|++ ++.||.|++||+.+.+.
T Consensus 254 ~~~----~~~~~~~~~~~~~v~~~~~s~~~~~l~~~g~~dg~i~i~d~~~~~~ 302 (402)
T 2aq5_A 254 HLE----EPLSLQELDTSSGVLLPFFDPDTNIVYLCGKGDSSIRYFEITSEAP 302 (402)
T ss_dssp BCS----SCSEEEECCCCSSCEEEEEETTTTEEEEEETTCSCEEEEEECSSTT
T ss_pred ccc----CCceEEeccCCCceeEEEEcCCCCEEEEEEcCCCeEEEEEecCCCc
Confidence 631 11222 2246678999999999999975 55799999999988763
No 98
>3lrv_A PRE-mRNA-splicing factor 19; PRP19, WD40, E3 ubiquitin ligase, spliceosome, DNA damage, D repair, mRNA processing, nucleus; 2.60A {Saccharomyces cerevisiae}
Probab=99.91 E-value=3.6e-23 Score=153.62 Aligned_cols=173 Identities=10% Similarity=-0.019 Sum_probs=128.7
Q ss_pred cccccccceeeeee-----eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccc---ee--ccceeccCC
Q psy13207 6 LQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQ---WC--LQHEVACPT 75 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~---~~--~~~~~~~~~ 75 (197)
+..|+++++|++.. .+. ...|.++.|+|. +++++.|++|++|+......+.. .. ......+..
T Consensus 54 g~~Dg~v~iwd~~~~~~~~~~~--~~~v~~~~~~~~-----~~s~s~D~~i~~w~~~~~~~~~~~~~~~~~~~~~~~~~~ 126 (343)
T 3lrv_A 54 RCEDGALHFTQLKDSKTITTIT--TPNPRTGGEHPA-----IISRGPCNRLLLLYPGNQITILDSKTNKVLREIEVDSAN 126 (343)
T ss_dssp EEETTEEEEEEESSSSCEEEEE--EECCCTTCCCCS-----EEEECSTTEEEEEETTTEEEEEETTTCCEEEEEECCCSS
T ss_pred ECCCCcEEEEECCCCcEEEEEe--cCCceeeeeCCc-----eEEecCCCeEEEEEccCceEEeecCCcceeEEeecCCCC
Confidence 56789999998753 222 467888888884 99999999999998764321100 01 011122246
Q ss_pred CeeeEEEcc--CCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccc
Q psy13207 76 LASCLTWNH--SFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFD 142 (197)
Q Consensus 76 ~~~~~~~~~--~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~ 142 (197)
.+.+++|+| ++++++++ +++|| +......|...+.+++|+++..+|++|+.|+.|++||+++
T Consensus 127 ~v~~~~~~~~~~~~~l~s~s~dg~i~~wd~~~~~~~~~~~~~~~~~i~~~~~~pdg~~lasg~~dg~i~iwd~~~----- 201 (343)
T 3lrv_A 127 EIIYMYGHNEVNTEYFIWADNRGTIGFQSYEDDSQYIVHSAKSDVEYSSGVLHKDSLLLALYSPDGILDVYNLSS----- 201 (343)
T ss_dssp CEEEEECCC---CCEEEEEETTCCEEEEESSSSCEEEEECCCSSCCCCEEEECTTSCEEEEECTTSCEEEEESSC-----
T ss_pred CEEEEEcCCCCCCCEEEEEeCCCcEEEEECCCCcEEEEEecCCCCceEEEEECCCCCEEEEEcCCCEEEEEECCC-----
Confidence 799999999 99998765 79999 2333324566899999996655559999999999999987
Q ss_pred eeee-eeecC-ceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 143 IETI-GNFED-HYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 143 ~~~~-~~~~~-h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
...+ ..+.. |..+|.+++|+|++.+|++++ |+.|++||+++.+....+
T Consensus 202 ~~~~~~~~~~~h~~~v~~l~fs~~g~~l~s~~-~~~v~iwd~~~~~~~~~~ 251 (343)
T 3lrv_A 202 PDQASSRFPVDEEAKIKEVKFADNGYWMVVEC-DQTVVCFDLRKDVGTLAY 251 (343)
T ss_dssp TTSCCEECCCCTTSCEEEEEECTTSSEEEEEE-SSBEEEEETTSSTTCBSS
T ss_pred CCCCccEEeccCCCCEEEEEEeCCCCEEEEEe-CCeEEEEEcCCCCcceee
Confidence 3444 56676 999999999999999999999 559999999987765443
No 99
>4aez_A CDC20, WD repeat-containing protein SLP1; cell cycle, KEN-BOX, D-BOX, APC/C; 2.30A {Schizosaccharomyces pombe}
Probab=99.90 E-value=1.3e-22 Score=153.55 Aligned_cols=170 Identities=21% Similarity=0.316 Sum_probs=135.2
Q ss_pred ccccccceeeeee-----eec-CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 7 QSEKCLNQWTRRS-----NLV-DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 7 ~~~~~~~~w~~~~-----~~~-~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
..++.+++|+... .+. .|...|.+++|+|+ +.+|++|+.||.|++||+.+++.+..+. .+...+.++
T Consensus 110 ~~d~~v~lw~~~~~~~~~~~~~~~~~~v~~v~~s~~--~~~l~~~~~dg~i~iwd~~~~~~~~~~~-----~~~~~v~~~ 182 (401)
T 4aez_A 110 ALERNVYVWNADSGSVSALAETDESTYVASVKWSHD--GSFLSVGLGNGLVDIYDVESQTKLRTMA-----GHQARVGCL 182 (401)
T ss_dssp EETTEEEEEETTTCCEEEEEECCTTCCEEEEEECTT--SSEEEEEETTSCEEEEETTTCCEEEEEC-----CCSSCEEEE
T ss_pred ECCCeEEEeeCCCCcEeEeeecCCCCCEEEEEECCC--CCEEEEECCCCeEEEEECcCCeEEEEec-----CCCCceEEE
Confidence 4678899997542 233 38899999999998 9999999999999999998876543332 236789999
Q ss_pred EEccCCCcccce-----eEEEE-------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeee
Q psy13207 81 TWNHSFSRFNSI-----SIMYE-------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN 148 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 148 (197)
+|+ +..++++ +++|+ +..+. .|...|.+++|+++.-+|++++.|+.|++||+++ ...+..
T Consensus 183 ~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~s~~~d~~v~iwd~~~-----~~~~~~ 254 (401)
T 4aez_A 183 SWN--RHVLSSGSRSGAIHHHDVRIANHQIGTLQ-GHSSEVCGLAWRSDGLQLASGGNDNVVQIWDARS-----SIPKFT 254 (401)
T ss_dssp EEE--TTEEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSCEEEEETTC-----SSEEEE
T ss_pred EEC--CCEEEEEcCCCCEEEEecccCcceeeEEc-CCCCCeeEEEEcCCCCEEEEEeCCCeEEEccCCC-----CCccEE
Confidence 994 4566554 79999 45566 8999999999995544449999999999999986 567778
Q ss_pred ecCceecEEEEEEccCC-CEEEEEe--CCCcEEEEEcCCCcchhhh
Q psy13207 149 FEDHYCTVWRVSWNITG-TIVASSG--DDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 149 ~~~h~~~v~~~~~~p~~-~~l~~~~--~dg~i~iw~~~~~~~~~~~ 191 (197)
+..|...|.+++|+|++ .++++++ .|+.|++||+++++....+
T Consensus 255 ~~~~~~~v~~~~~~p~~~~ll~~~~gs~d~~i~i~d~~~~~~~~~~ 300 (401)
T 4aez_A 255 KTNHNAAVKAVAWCPWQSNLLATGGGTMDKQIHFWNAATGARVNTV 300 (401)
T ss_dssp ECCCSSCCCEEEECTTSTTEEEEECCTTTCEEEEEETTTCCEEEEE
T ss_pred ecCCcceEEEEEECCCCCCEEEEecCCCCCEEEEEECCCCCEEEEE
Confidence 88899999999999976 5666654 7999999999987665444
No 100
>3odt_A Protein DOA1; ubiquitin, nuclear protein; HET: MSE MES; 1.35A {Saccharomyces cerevisiae}
Probab=99.90 E-value=4e-22 Score=145.32 Aligned_cols=152 Identities=14% Similarity=0.165 Sum_probs=129.6
Q ss_pred eeeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-
Q psy13207 14 QWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI- 92 (197)
Q Consensus 14 ~w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~- 92 (197)
.+.+..++.+|.++|.+++| |+ +.+|++++.||.|++||+.+.+....+. .+...+.+++|+|++..++++
T Consensus 7 ~~~~~~~l~~h~~~v~~~~~-~~--~~~l~s~~~dg~v~vw~~~~~~~~~~~~-----~~~~~v~~~~~~~~~~~l~~~~ 78 (313)
T 3odt_A 7 GYQLSATLKGHDQDVRDVVA-VD--DSKVASVSRDGTVRLWSKDDQWLGTVVY-----TGQGFLNSVCYDSEKELLLFGG 78 (313)
T ss_dssp CCEEEEEECCCSSCEEEEEE-EE--TTEEEEEETTSEEEEEEESSSEEEEEEE-----ECSSCEEEEEEETTTTEEEEEE
T ss_pred cHHHHHHhhCCCCCcEEEEe-cC--CCEEEEEEcCCcEEEEECCCCEEEEEee-----cCCccEEEEEECCCCCEEEEec
Confidence 45667789999999999999 88 8999999999999999997765432222 236789999999999998766
Q ss_pred ----eEEEE---------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEE
Q psy13207 93 ----SIMYE---------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159 (197)
Q Consensus 93 ----~~~~~---------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~ 159 (197)
+++|+ +..+. .|...|.+++|+++.+ ++++.|+.|++||. ......+..|...+.++
T Consensus 79 ~dg~i~~~~~~~~~~~~~~~~~~-~~~~~i~~~~~~~~~l--~~~~~d~~i~~~d~-------~~~~~~~~~~~~~v~~~ 148 (313)
T 3odt_A 79 KDTMINGVPLFATSGEDPLYTLI-GHQGNVCSLSFQDGVV--ISGSWDKTAKVWKE-------GSLVYNLQAHNASVWDA 148 (313)
T ss_dssp TTSCEEEEETTCCTTSCC-CEEC-CCSSCEEEEEEETTEE--EEEETTSEEEEEET-------TEEEEEEECCSSCEEEE
T ss_pred CCCeEEEEEeeecCCCCcccchh-hcccCEEEEEecCCEE--EEEeCCCCEEEEcC-------CcEEEecccCCCceeEE
Confidence 78898 44556 7999999999998888 99999999999993 56677788899999999
Q ss_pred EEcc-CCCEEEEEeCCCcEEEEEcC
Q psy13207 160 SWNI-TGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 160 ~~~p-~~~~l~~~~~dg~i~iw~~~ 183 (197)
+|+| +++++++++.||.|++||..
T Consensus 149 ~~~~~~~~~l~~~~~d~~i~i~d~~ 173 (313)
T 3odt_A 149 KVVSFSENKFLTASADKTIKLWQND 173 (313)
T ss_dssp EEEETTTTEEEEEETTSCEEEEETT
T ss_pred EEccCCCCEEEEEECCCCEEEEecC
Confidence 9998 89999999999999999944
No 101
>3mkq_A Coatomer beta'-subunit; beta-propeller, alpha-solenoid, transport protein; 2.50A {Saccharomyces cerevisiae} PDB: 2ynp_A
Probab=99.90 E-value=1.6e-22 Score=164.85 Aligned_cols=173 Identities=16% Similarity=0.227 Sum_probs=141.0
Q ss_pred ccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeE
Q psy13207 7 QSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCL 80 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~ 80 (197)
..++.+++|+.. ..+.+|.+.|.+++|+|+ +.+|++++.||.|++||+.++... ...+. +...+.++
T Consensus 74 ~~dg~i~vw~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~dg~i~vw~~~~~~~~-----~~~~~~~~~~v~~~ 146 (814)
T 3mkq_A 74 SDDFRIRVFNYNTGEKVVDFEAHPDYIRSIAVHPT--KPYVLSGSDDLTVKLWNWENNWAL-----EQTFEGHEHFVMCV 146 (814)
T ss_dssp ETTSEEEEEETTTCCEEEEEECCSSCEEEEEECSS--SSEEEEEETTSEEEEEEGGGTSEE-----EEEEECCSSCEEEE
T ss_pred eCCCeEEEEECCCCcEEEEEecCCCCEEEEEEeCC--CCEEEEEcCCCEEEEEECCCCceE-----EEEEcCCCCcEEEE
Confidence 457899999853 467889999999999999 999999999999999999875322 12222 26789999
Q ss_pred EEcc-CCCcccce-----eEEEE------eeEecccCCCceeEEEEcC--CCeEEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 81 TWNH-SFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDY--YGLRMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 81 ~~~~-~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~--~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
+|+| ++..++++ +++|+ ...+...+...+.+++|++ +.-.+++++.|+.|++||.++ ...+
T Consensus 147 ~~~p~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~l~~~~~dg~i~~~d~~~-----~~~~ 221 (814)
T 3mkq_A 147 AFNPKDPSTFASGCLDRTVKVWSLGQSTPNFTLTTGQERGVNYVDYYPLPDKPYMITASDDLTIKIWDYQT-----KSCV 221 (814)
T ss_dssp EEETTEEEEEEEEETTSEEEEEETTCSSCSEEEECCCTTCCCEEEECCSTTCCEEEEECTTSEEEEEETTT-----TEEE
T ss_pred EEEcCCCCEEEEEeCCCeEEEEECCCCcceeEEecCCCCCEEEEEEEECCCCCEEEEEeCCCEEEEEECCC-----CcEE
Confidence 9999 77777655 79999 3344424558899999984 555559999999999999976 5677
Q ss_pred eeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
..+.+|...|.+++|+|++++|++++.||.|++||+.+++....+
T Consensus 222 ~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~ 266 (814)
T 3mkq_A 222 ATLEGHMSNVSFAVFHPTLPIIISGSEDGTLKIWNSSTYKVEKTL 266 (814)
T ss_dssp EEEECCSSCEEEEEECSSSSEEEEEETTSCEEEEETTTCSEEEEE
T ss_pred EEEcCCCCCEEEEEEcCCCCEEEEEeCCCeEEEEECCCCcEEEEe
Confidence 888889999999999999999999999999999999886654443
No 102
>4a11_B DNA excision repair protein ERCC-8; DNA binding protein, DNA damage repair; HET: DNA; 3.31A {Homo sapiens}
Probab=99.90 E-value=4.6e-22 Score=149.83 Aligned_cols=175 Identities=14% Similarity=0.156 Sum_probs=134.4
Q ss_pred cccccccceeeeeee-----e-------------cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceec
Q psy13207 6 LQSEKCLNQWTRRSN-----L-------------VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCL 67 (197)
Q Consensus 6 ~~~~~~~~~w~~~~~-----~-------------~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~ 67 (197)
+..++.+++|++... + .+|...|.+++|+|++ +.+|++++.||.|++||+.+++....+
T Consensus 62 ~~~dg~i~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~-- 138 (408)
T 4a11_B 62 GGSDGVIVLYDLENSSRQSYYTCKAVCSIGRDHPDVHRYSVETVQWYPHD-TGMFTSSSFDKTLKVWDTNTLQTADVF-- 138 (408)
T ss_dssp EETTSCEEEEECCCCSSSSCEEECEEEEECTTCTTCCSSCEEEEEECTTC-TTCEEEEETTSEEEEEETTTTEEEEEE--
T ss_pred EcCCCeEEEEECCCCcccceEeccccccccccccccCCCcEEEEEEccCC-CcEEEEEeCCCeEEEeeCCCCccceec--
Confidence 456889999987632 1 2599999999999931 789999999999999999987654333
Q ss_pred cceeccCCCeeeEEEccCCC---cccce-----eEEEE------eeEecccCCCceeEEEEcCCCe-EEEEeeCCCeEEE
Q psy13207 68 QHEVACPTLASCLTWNHSFS---RFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGL-RMATCSSDQNIKV 132 (197)
Q Consensus 68 ~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~-~~~s~~~d~~i~~ 132 (197)
.....+.++.|.+.+. .++++ +++|+ +..+. .|...|.+++|+++.- +|++++.|+.|++
T Consensus 139 ----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~-~~~~~v~~~~~~~~~~~ll~~~~~dg~i~i 213 (408)
T 4a11_B 139 ----NFEETVYSHHMSPVSTKHCLVAVGTRGPKVQLCDLKSGSCSHILQ-GHRQEILAVSWSPRYDYILATASADSRVKL 213 (408)
T ss_dssp ----ECSSCEEEEEECSSCSSCCEEEEEESSSSEEEEESSSSCCCEEEC-CCCSCEEEEEECSSCTTEEEEEETTSCEEE
T ss_pred ----cCCCceeeeEeecCCCCCcEEEEEcCCCeEEEEeCCCcceeeeec-CCCCcEEEEEECCCCCcEEEEEcCCCcEEE
Confidence 2356788999998654 56554 79999 55666 8999999999994321 2389999999999
Q ss_pred EEccCCccc-----------ceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 133 TRDVMGTRF-----------DIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 133 ~d~~~~~~~-----------~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
||+++.... ..........|...|.+++|+|++++|++++.||.|++||+++++..
T Consensus 214 ~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~l~~~~~dg~i~vwd~~~~~~~ 280 (408)
T 4a11_B 214 WDVRRASGCLITLDQHNGKKSQAVESANTAHNGKVNGLCFTSDGLHLLTVGTDNRMRLWNSSNGENT 280 (408)
T ss_dssp EETTCSSCCSEECCTTTTCSCCCTTTSSCSCSSCEEEEEECTTSSEEEEEETTSCEEEEETTTCCBC
T ss_pred EECCCCCcccccccccccccceeeccccccccCceeEEEEcCCCCEEEEecCCCeEEEEECCCCccc
Confidence 999763100 00111122578899999999999999999999999999999886643
No 103
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.90 E-value=9.8e-23 Score=150.48 Aligned_cols=177 Identities=15% Similarity=0.097 Sum_probs=136.9
Q ss_pred cccccccceeee-e----eeecC--CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCC---------cccccceeccc
Q psy13207 6 LQSEKCLNQWTR-R----SNLVD--SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPD---------VMNLSQWCLQH 69 (197)
Q Consensus 6 ~~~~~~~~~w~~-~----~~~~~--h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~---------~~~~~~~~~~~ 69 (197)
+..++.+++|++ . ..+.+ |...|.+++|+| +..|++++.|+.|++||+++ .+.+..
T Consensus 75 ~~~dg~i~~wd~~~~~~~~~~~~~~~~~~v~~l~~~~---~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~----- 146 (342)
T 1yfq_A 75 GTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYG---DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNN----- 146 (342)
T ss_dssp EETTSCEEEECSSSSSSEEECBSCCCCSCEEEEEEET---TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSS-----
T ss_pred EcCCCeEEEEEeccCCceEeccccCCCCceEEEEeCC---CCEEEEEcCCCeEEEEcccccccccccccCCeeeE-----
Confidence 346789999988 4 35778 999999999998 56899999999999999986 443322
Q ss_pred eeccCCCeeeEEEccCCCcccce-----eEEEEeeE--------ecccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEc
Q psy13207 70 EVACPTLASCLTWNHSFSRFNSI-----SIMYEAHS--------INAEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRD 135 (197)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~--------~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~ 135 (197)
+.....+.+++|+|++ ++++ +++|++.. ....|...+.+++|++ +.-++++++.|+.|++|++
T Consensus 147 -~~~~~~v~~~~~~~~~--l~~~~~d~~i~i~d~~~~~~~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~ 223 (342)
T 1yfq_A 147 -TKVKNKIFTMDTNSSR--LIVGMNNSQVQWFRLPLCEDDNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFF 223 (342)
T ss_dssp -SSSCCCEEEEEECSSE--EEEEESTTEEEEEESSCCTTCCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEEC
T ss_pred -EeeCCceEEEEecCCc--EEEEeCCCeEEEEECCccccccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEE
Confidence 2246789999999988 4333 89999443 2225778899999997 5555699999999999999
Q ss_pred cCCc-ccceeeeeeecCcee---------cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 136 VMGT-RFDIETIGNFEDHYC---------TVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 136 ~~~~-~~~~~~~~~~~~h~~---------~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
+... .........+..|.. .|.+++|+|++++|++++.||.|++||+.+++....+..
T Consensus 224 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~s~~~~~l~~~~~dg~i~vwd~~~~~~~~~~~~ 291 (342)
T 1yfq_A 224 DDQGDDYNSSKRFAFRCHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKNFAK 291 (342)
T ss_dssp CTTCCSTTCTTCEEEECCCCCTTCCSSCCCEEEEEECTTTCCEEEEETTSCEEEEETTTTEEEEECCC
T ss_pred cCCCcccccccceeeecccccccccccceeEEEEEEcCCCCEEEEecCCceEEEEcCccHhHhhhhhc
Confidence 7520 000144555666654 999999999999999999999999999998876655544
No 104
>3zwl_B Eukaryotic translation initiation factor 3 subuni; 2.20A {Saccharomyces cerevisiae}
Probab=99.90 E-value=7.3e-22 Score=146.77 Aligned_cols=165 Identities=16% Similarity=0.234 Sum_probs=133.0
Q ss_pred ccccceeeeeee----------------ecCCCc--ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCc-ccccceeccc
Q psy13207 9 EKCLNQWTRRSN----------------LVDSRT--SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDV-MNLSQWCLQH 69 (197)
Q Consensus 9 ~~~~~~w~~~~~----------------~~~h~~--~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~-~~~~~~~~~~ 69 (197)
++.+++|++... +..|.. .+.+++|+|+ +.+|++++.||.|++||+.+. +....+.
T Consensus 141 ~g~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~dg~i~i~d~~~~~~~~~~~~--- 215 (369)
T 3zwl_B 141 PGSINIYEIERDSATHELTKVSEEPIHKIITHEGLDAATVAGWSTK--GKYIIAGHKDGKISKYDVSNNYEYVDSID--- 215 (369)
T ss_dssp CCEEEEEEEEECTTTCCEEEECSSCSEEEECCTTCCCEEEEEECGG--GCEEEEEETTSEEEEEETTTTTEEEEEEE---
T ss_pred CCEEEEEEecCCccceeecccccceeeeccCCcCccceeEEEEcCC--CCEEEEEcCCCEEEEEECCCCcEeEEEEe---
Confidence 378888887542 334555 8999999998 999999999999999999873 3222211
Q ss_pred eeccCCCeeeEEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCC----------
Q psy13207 70 EVACPTLASCLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQ---------- 128 (197)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~---------- 128 (197)
.+...+.+++|+|++.+++++ +++|| +..+ .+...+..++|+++.-.+++++.++
T Consensus 216 --~~~~~v~~~~~~~~~~~l~~~~~d~~i~v~d~~~~~~~~~~--~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~ 291 (369)
T 3zwl_B 216 --LHEKSISDMQFSPDLTYFITSSRDTNSFLVDVSTLQVLKKY--ETDCPLNTAVITPLKEFIILGGGQEAKDVTTTSAN 291 (369)
T ss_dssp --CCSSCEEEEEECTTSSEEEEEETTSEEEEEETTTCCEEEEE--ECSSCEEEEEECSSSSEEEEEECCC----------
T ss_pred --cCCCceeEEEECCCCCEEEEecCCceEEEEECCCCceeeee--cCCCCceeEEecCCCceEEEeecCCCceEEEEecC
Confidence 136789999999999988765 79999 3333 3678899999994444448888887
Q ss_pred ----eEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 129 ----NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 129 ----~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
.+++||..+ .+.+..+.+|...|.+++|+|++++|++++.||.|++|+++.+..
T Consensus 292 ~~~~~i~~~d~~~-----~~~~~~~~~~~~~v~~~~~s~~~~~l~s~~~dg~v~iw~~~~~~~ 349 (369)
T 3zwl_B 292 EGKFEARFYHKIF-----EEEIGRVQGHFGPLNTVAISPQGTSYASGGEDGFIRLHHFEKSYF 349 (369)
T ss_dssp ---CEEEEEETTT-----CCEEEEEECCSSCEEEEEECTTSSEEEEEETTSEEEEEEECHHHH
T ss_pred CCcceeEEEecCC-----CcchhheecccCcEEEEEECCCCCEEEEEcCCCeEEEEECccccc
Confidence 899999976 677788889999999999999999999999999999999987543
No 105
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.90 E-value=1.4e-22 Score=156.94 Aligned_cols=168 Identities=15% Similarity=0.079 Sum_probs=123.6
Q ss_pred cccccceeeeee--eec-CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEcc
Q psy13207 8 SEKCLNQWTRRS--NLV-DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNH 84 (197)
Q Consensus 8 ~~~~~~~w~~~~--~~~-~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (197)
.++....|+... .+. .|...|.+++|+|+ |..||+++.||.|++||... .+..+. .........+.+++|+|
T Consensus 65 ~~~~~~~~~~~~~~~~~~~~~~~V~~vawSPd--G~~LAs~s~dg~V~iwd~~~--~l~~l~-~~~~~~~~sv~svafSP 139 (588)
T 2j04_A 65 FENKLDFELAQQNGLLNSQPVCYPRVCKPSPI--DDWMAVLSNNGNVSVFKDNK--MLTNLD-SKGNLSSRTYHCFEWNP 139 (588)
T ss_dssp CCCTTTTSCCCSSCSSTTSCSCCEEEEEECSS--SSCEEEEETTSCEEEEETTE--EEEECC-CSSCSTTTCEEEEEECS
T ss_pred CcceEEEEeCCCceEeecCCCCcEEEEEECCC--CCEEEEEeCCCcEEEEeCCc--eeeecc-CCCccccccEEEEEEcC
Confidence 444555554332 233 56889999999999 99999999999999999543 222111 11111134699999999
Q ss_pred CCCcccce-----eEEEE-----e--------eEec---ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccce
Q psy13207 85 SFSRFNSI-----SIMYE-----A--------HSIN---AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDI 143 (197)
Q Consensus 85 ~~~~~~~~-----~~~~~-----~--------~~~~---~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~ 143 (197)
+|++++++ +++|+ + ..+. .+|...|.+++|+|+.+ ++++.|+.|++||+..... .
T Consensus 140 DG~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~gh~~~V~sVawSPdgL--aass~D~tVrlWd~~~~~~--~ 215 (588)
T 2j04_A 140 IESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDAGSKDWVTHIVWYEDVL--VAALSNNSVFSMTVSASSH--Q 215 (588)
T ss_dssp SSSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCTTCCCCEEEEEEETTEE--EEEETTCCEEEECCCSSSS--C
T ss_pred CCCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccccccccEEEEEEcCCcE--EEEeCCCeEEEEECCCCcc--c
Confidence 99999877 79999 1 3331 26788999999997775 9999999999999975210 1
Q ss_pred eeeeee-cCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 144 ETIGNF-EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 144 ~~~~~~-~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
.....+ .+|...|.+++|+ |++||+++ +++|++||+..+..
T Consensus 216 ~~~~tL~~~h~~~V~svaFs--g~~LASa~-~~tIkLWd~~~~~~ 257 (588)
T 2j04_A 216 PVSRMIQNASRRKITDLKIV--DYKVVLTC-PGYVHKIDLKNYSI 257 (588)
T ss_dssp CCEEEEECCCSSCCCCEEEE--TTEEEEEC-SSEEEEEETTTTEE
T ss_pred cceeeecccccCcEEEEEEE--CCEEEEEe-CCeEEEEECCCCeE
Confidence 123345 4788899999999 68999987 69999999987554
No 106
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.90 E-value=5e-22 Score=151.85 Aligned_cols=167 Identities=17% Similarity=0.264 Sum_probs=136.4
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..++.+++|+.. ..+.+|.++|.++.| + +++|++|+.||+|++||+.+++.+..+. .+...+.++
T Consensus 149 g~~dg~i~iwd~~~~~~~~~~~~h~~~v~~l~~--~--~~~l~sg~~dg~i~vwd~~~~~~~~~~~-----~h~~~v~~l 219 (435)
T 1p22_A 149 GLRDNTIKIWDKNTLECKRILTGHTGSVLCLQY--D--ERVIITGSSDSTVRVWDVNTGEMLNTLI-----HHCEAVLHL 219 (435)
T ss_dssp EESSSCEEEEESSSCCEEEEECCCSSCEEEEEC--C--SSEEEEEETTSCEEEEESSSCCEEEEEC-----CCCSCEEEE
T ss_pred EeCCCeEEEEeCCCCeEEEEEcCCCCcEEEEEE--C--CCEEEEEcCCCeEEEEECCCCcEEEEEc-----CCCCcEEEE
Confidence 4578899999854 468899999999999 5 7799999999999999999876543332 236688999
Q ss_pred EEccCCCcccce-----eEEEE------e---eEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------A---HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------~---~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
.|+++ .++++ +++|+ . ..+. +|...|.+++|.++.+ ++|+.|+.|++||+++ .+.+
T Consensus 220 ~~~~~--~l~s~s~dg~i~vwd~~~~~~~~~~~~~~-~~~~~v~~~~~~~~~l--~s~~~dg~i~vwd~~~-----~~~~ 289 (435)
T 1p22_A 220 RFNNG--MMVTCSKDRSIAVWDMASPTDITLRRVLV-GHRAAVNVVDFDDKYI--VSASGDRTIKVWNTST-----CEFV 289 (435)
T ss_dssp ECCTT--EEEEEETTSCEEEEECSSSSCCEEEEEEC-CCSSCEEEEEEETTEE--EEEETTSEEEEEETTT-----CCEE
T ss_pred EEcCC--EEEEeeCCCcEEEEeCCCCCCceeeeEec-CCCCcEEEEEeCCCEE--EEEeCCCeEEEEECCc-----CcEE
Confidence 99753 55444 79999 1 4555 8999999999988888 9999999999999977 6778
Q ss_pred eeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
..+.+|...|.+++| +++++++|+.||.|++||++++.....+..
T Consensus 290 ~~~~~~~~~v~~~~~--~~~~l~~g~~dg~i~iwd~~~~~~~~~~~~ 334 (435)
T 1p22_A 290 RTLNGHKRGIACLQY--RDRLVVSGSSDNTIRLWDIECGACLRVLEG 334 (435)
T ss_dssp EEEECCSSCEEEEEE--ETTEEEEEETTSCEEEEETTTCCEEEEECC
T ss_pred EEEcCCCCcEEEEEe--CCCEEEEEeCCCeEEEEECCCCCEEEEEeC
Confidence 888899999999998 478999999999999999998776655543
No 107
>3v7d_B Cell division control protein 4; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_B* 3mks_B*
Probab=99.90 E-value=1.5e-21 Score=149.96 Aligned_cols=173 Identities=14% Similarity=0.151 Sum_probs=134.2
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceec-------------
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCL------------- 67 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~------------- 67 (197)
+..|+++++|++. ..+.+|.++|.+++|++..++.+|++|+.||+|++||+.+.........
T Consensus 179 ~s~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~~~~~~l~s~s~d~~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~~ 258 (464)
T 3v7d_B 179 GSTDRTVRVWDIKKGCCTHVFEGHNSTVRCLDIVEYKNIKYIVTGSRDNTLHVWKLPKESSVPDHGEEHDYPLVFHTPEE 258 (464)
T ss_dssp EETTSCEEEEETTTTEEEEEECCCSSCEEEEEEEESSSCEEEEEEETTSCEEEEECCCCCCC------CCSSEEESCGGG
T ss_pred EeCCCCEEEEECCCCcEEEEECCCCCccEEEEEecCCCCCEEEEEcCCCcEEEeeCCCCcccccccccCCcceEeeccCC
Confidence 4678999999854 4678999999999999532289999999999999999987654322110
Q ss_pred ----cceec-cCCCeeeEEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEE
Q psy13207 68 ----QHEVA-CPTLASCLTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIK 131 (197)
Q Consensus 68 ----~~~~~-~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~ 131 (197)
...+. +...+.+ +++++.+++++ +++|| +..+. +|...|.+++|+++.-++++|+.|+.|+
T Consensus 259 ~~~~~~~~~~~~~~v~~--~~~~~~~l~~~~~d~~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~~~l~sg~~dg~i~ 335 (464)
T 3v7d_B 259 NPYFVGVLRGHMASVRT--VSGHGNIVVSGSYDNTLIVWDVAQMKCLYILS-GHTDRIYSTIYDHERKRCISASMDTTIR 335 (464)
T ss_dssp CTTEEEEECCCSSCEEE--EEEETTEEEEEETTSCEEEEETTTTEEEEEEC-CCSSCEEEEEEETTTTEEEEEETTSCEE
T ss_pred CeEEEEEccCccceEEE--EcCCCCEEEEEeCCCeEEEEECCCCcEEEEec-CCCCCEEEEEEcCCCCEEEEEeCCCcEE
Confidence 01111 1334444 46777777665 79999 56677 8999999999995433349999999999
Q ss_pred EEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 132 VTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 132 ~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
+||+++ .+++..+.+|...|.+++|+ +++|++++.||+|++||+++....
T Consensus 336 vwd~~~-----~~~~~~~~~h~~~v~~~~~~--~~~l~s~s~dg~v~vwd~~~~~~~ 385 (464)
T 3v7d_B 336 IWDLEN-----GELMYTLQGHTALVGLLRLS--DKFLVSAAADGSIRGWDANDYSRK 385 (464)
T ss_dssp EEETTT-----TEEEEEECCCSSCEEEEEEC--SSEEEEEETTSEEEEEETTTCCEE
T ss_pred EEECCC-----CcEEEEEeCCCCcEEEEEEc--CCEEEEEeCCCcEEEEECCCCcee
Confidence 999977 67888899999999999997 589999999999999999876543
No 108
>1p22_A F-BOX/WD-repeat protein 1A; ubiquitination, degradation, signaling protein; HET: SEP; 2.95A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1
Probab=99.89 E-value=4.5e-22 Score=152.10 Aligned_cols=162 Identities=16% Similarity=0.272 Sum_probs=134.5
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeee
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~ 79 (197)
+..|+++++|++. ..+.+|...|.++.|+++ .+++|+.||.|++||+.++..... ...+. +...+.+
T Consensus 189 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~l~~~~~----~l~s~s~dg~i~vwd~~~~~~~~~---~~~~~~~~~~v~~ 261 (435)
T 1p22_A 189 GSSDSTVRVWDVNTGEMLNTLIHHCEAVLHLRFNNG----MMVTCSKDRSIAVWDMASPTDITL---RRVLVGHRAAVNV 261 (435)
T ss_dssp EETTSCEEEEESSSCCEEEEECCCCSCEEEEECCTT----EEEEEETTSCEEEEECSSSSCCEE---EEEECCCSSCEEE
T ss_pred EcCCCeEEEEECCCCcEEEEEcCCCCcEEEEEEcCC----EEEEeeCCCcEEEEeCCCCCCcee---eeEecCCCCcEEE
Confidence 4678999999864 467899999999999753 899999999999999987654321 11222 3678889
Q ss_pred EEEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeee
Q psy13207 80 LTWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN 148 (197)
Q Consensus 80 ~~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 148 (197)
+.| ++.+++++ +++|| +..+. +|...|.+++|+++.+ ++|+.|+.|++||+++ ..++..
T Consensus 262 ~~~--~~~~l~s~~~dg~i~vwd~~~~~~~~~~~-~~~~~v~~~~~~~~~l--~~g~~dg~i~iwd~~~-----~~~~~~ 331 (435)
T 1p22_A 262 VDF--DDKYIVSASGDRTIKVWNTSTCEFVRTLN-GHKRGIACLQYRDRLV--VSGSSDNTIRLWDIEC-----GACLRV 331 (435)
T ss_dssp EEE--ETTEEEEEETTSEEEEEETTTCCEEEEEE-CCSSCEEEEEEETTEE--EEEETTSCEEEEETTT-----CCEEEE
T ss_pred EEe--CCCEEEEEeCCCeEEEEECCcCcEEEEEc-CCCCcEEEEEeCCCEE--EEEeCCCeEEEEECCC-----CCEEEE
Confidence 988 66666654 89999 66677 8999999999998888 9999999999999987 677888
Q ss_pred ecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 149 FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 149 ~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
+.+|...|.+++| ++++|++|+.||.|++||+++..
T Consensus 332 ~~~h~~~v~~~~~--~~~~l~sg~~dg~i~vwd~~~~~ 367 (435)
T 1p22_A 332 LEGHEELVRCIRF--DNKRIVSGAYDGKIKVWDLVAAL 367 (435)
T ss_dssp ECCCSSCEEEEEC--CSSEEEEEETTSCEEEEEHHHHT
T ss_pred EeCCcCcEEEEEe--cCCEEEEEeCCCcEEEEECCCCC
Confidence 9999999999999 78899999999999999997644
No 109
>4gga_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; 2.04A {Homo sapiens} PDB: 4ggd_A
Probab=99.89 E-value=4.5e-22 Score=151.48 Aligned_cols=173 Identities=15% Similarity=0.246 Sum_probs=131.6
Q ss_pred cccccceeeee-----e--eecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 8 SEKCLNQWTRR-----S--NLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 8 ~~~~~~~w~~~-----~--~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
.|++|++|+.. . .+.+|...|++++|+|+ |++|++|+.||+|+|||+.+++.+..+. .+...+.++
T Consensus 123 ld~tV~lWd~~tg~~~~~~~~~~~~~~V~sv~fspd--g~~lasgs~Dg~v~iWd~~~~~~~~~~~-----~h~~~v~~~ 195 (420)
T 4gga_A 123 LDNSVYLWSASSGDILQLLQMEQPGEYISSVAWIKE--GNYLAVGTSSAEVQLWDVQQQKRLRNMT-----SHSARVGSL 195 (420)
T ss_dssp ETTEEEEEETTTCCEEEEEECCSTTCCEEEEEECTT--SSEEEEEETTSCEEEEETTTTEEEEEEC-----CCSSCEEEE
T ss_pred eCCEEEEEECCCCCEEEEEEecCCCCcEEEEEECCC--CCEEEEEECCCeEEEEEcCCCcEEEEEe-----CCCCceEEE
Confidence 47889999854 2 24578889999999999 9999999999999999999886554332 124567777
Q ss_pred EEccCCCcccce-----eEEEE-------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeee
Q psy13207 81 TWNHSFSRFNSI-----SIMYE-------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN 148 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 148 (197)
.++ +..++++ +.+|+ +..+. +|...+..+.|+++.-.+++++.|+.+++|+..+.... ...+..
T Consensus 196 s~~--~~~l~sgs~d~~i~~~d~~~~~~~~~~~~-~h~~~~~~~~~~~~g~~l~s~~~D~~v~i~~~~~~~~~-~~~~~~ 271 (420)
T 4gga_A 196 SWN--SYILSSGSRSGHIHHHDVRVAEHHVATLS-GHSQEVCGLRWAPDGRHLASGGNDNLVNVWPSAPGEGG-WVPLQT 271 (420)
T ss_dssp EEE--TTEEEEEETTSEEEEEETTSSSCEEEEEE-CCSSCEEEEEECTTSSEEEEEETTSCEEEEESSCCSSC-SCCSEE
T ss_pred eeC--CCEEEEEeCCCceeEeeecccceeeEEec-ccccceeeeeecCCCCeeeeeeccccceEEeecccccc-ceeeee
Confidence 664 5566554 68888 55667 89999999999944444499999999999999763221 234556
Q ss_pred ecCceecEEEEEEccCC-CEEEE--EeCCCcEEEEEcCCCcchhhh
Q psy13207 149 FEDHYCTVWRVSWNITG-TIVAS--SGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 149 ~~~h~~~v~~~~~~p~~-~~l~~--~~~dg~i~iw~~~~~~~~~~~ 191 (197)
...|...|.+++|+|++ .++++ |+.|++|++||+.++.....+
T Consensus 272 ~~~~~~~V~~~~~~p~~~~~la~~~gs~D~~I~iwd~~t~~~~~~~ 317 (420)
T 4gga_A 272 FTQHQGAVKAVAWCPWQSNVLATGGGTSDRHIRIWNVCSGACLSAV 317 (420)
T ss_dssp ECCCSSCEEEEEECTTCTTEEEEEECTTTCEEEEEETTTTEEEEEE
T ss_pred ecccCCceeeeeeCCCcccEEEEEeecCCCEEEEEeCCccccceee
Confidence 67889999999999965 55555 457999999999987655443
No 110
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.89 E-value=1.4e-21 Score=149.72 Aligned_cols=166 Identities=16% Similarity=0.247 Sum_probs=135.7
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..|+.+++|+.. ..+.+|..+|.++.|++ ..|++|+.||+|++||+.+++.+..+. .+...+.++
T Consensus 135 g~~dg~i~vwd~~~~~~~~~~~~h~~~v~~~~~~~----~~l~s~~~dg~i~vwd~~~~~~~~~~~-----~h~~~v~~~ 205 (445)
T 2ovr_B 135 GSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRD----NIIISGSTDRTLKVWNAETGECIHTLY-----GHTSTVRCM 205 (445)
T ss_dssp EETTSCEEEEETTTCCEEEECCCCSSCEEEEEEET----TEEEEEETTSCEEEEETTTTEEEEEEC-----CCSSCEEEE
T ss_pred EECCCcEEEEECCCCcEEEEEcCCCCCEEEEEecC----CEEEEEeCCCeEEEEECCcCcEEEEEC-----CCCCcEEEE
Confidence 4678899999853 46889999999999974 489999999999999998876543322 135678899
Q ss_pred EEccCCCcccce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeee
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF 149 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~ 149 (197)
.|++ ..++++ +++|+ +..+. +|...+.+++|+++.+ ++++.|+.|++||.++ .+.+..+
T Consensus 206 ~~~~--~~l~s~s~dg~i~~wd~~~~~~~~~~~-~~~~~v~~~~~~~~~l--~~~~~dg~i~iwd~~~-----~~~~~~~ 275 (445)
T 2ovr_B 206 HLHE--KRVVSGSRDATLRVWDIETGQCLHVLM-GHVAAVRCVQYDGRRV--VSGAYDFMVKVWDPET-----ETCLHTL 275 (445)
T ss_dssp EEET--TEEEEEETTSEEEEEESSSCCEEEEEE-CCSSCEEEEEECSSCE--EEEETTSCEEEEEGGG-----TEEEEEE
T ss_pred EecC--CEEEEEeCCCEEEEEECCCCcEEEEEc-CCcccEEEEEECCCEE--EEEcCCCEEEEEECCC-----CcEeEEe
Confidence 9864 445443 79999 55666 8999999999988888 9999999999999976 6778888
Q ss_pred cCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhh
Q psy13207 150 EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 150 ~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~ 192 (197)
.+|...|.+++| +++++++++.||.|++||+++++....+.
T Consensus 276 ~~~~~~v~~~~~--~~~~l~~~~~d~~i~i~d~~~~~~~~~~~ 316 (445)
T 2ovr_B 276 QGHTNRVYSLQF--DGIHVVSGSLDTSIRVWDVETGNCIHTLT 316 (445)
T ss_dssp CCCSSCEEEEEE--CSSEEEEEETTSCEEEEETTTCCEEEEEC
T ss_pred cCCCCceEEEEE--CCCEEEEEeCCCeEEEEECCCCCEEEEEc
Confidence 899999999999 78899999999999999998877655443
No 111
>3sfz_A APAF-1, apoptotic peptidase activating factor 1; apoptosis, caspase activation, cytochrome C, procaspase-9, A nucleotide, cytosol; HET: ADP; 3.00A {Mus musculus} PDB: 3shf_A* 3iyt_A* 3iza_A*
Probab=99.89 E-value=1.8e-22 Score=171.25 Aligned_cols=169 Identities=12% Similarity=0.211 Sum_probs=143.0
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..++.+++|+.. ..+.+|...|.+++|+|+ +++|++++.||.|++||+.+++... ...+...+.++
T Consensus 979 g~~~g~i~i~d~~~~~~~~~~~~h~~~v~~l~~s~d--g~~l~s~~~dg~i~vwd~~~~~~~~------~~~~~~~v~~~ 1050 (1249)
T 3sfz_A 979 GDEDGAIKIIELPNNRVFSSGVGHKKAVRHIQFTAD--GKTLISSSEDSVIQVWNWQTGDYVF------LQAHQETVKDF 1050 (1249)
T ss_dssp EETTSCCEEEETTTTSCEEECCCCSSCCCCEEECSS--SSCEEEECSSSBEEEEETTTTEEEC------CBCCSSCEEEE
T ss_pred EcCCCCEEEEEcCCCceeeecccCCCceEEEEECCC--CCEEEEEcCCCEEEEEECCCCceEE------EecCCCcEEEE
Confidence 3567888888754 457789999999999999 9999999999999999998875432 12336789999
Q ss_pred EEccCCCcccce----eEEEE------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeee
Q psy13207 81 TWNHSFSRFNSI----SIMYE------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN 148 (197)
Q Consensus 81 ~~~~~~~~~~~~----~~~~~------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 148 (197)
.|+|++..+..+ +++|+ +..+. +|...|.+++|+ +..+ ++++.|+.|++||+.+ ...+..
T Consensus 1051 ~~~~~~~l~~~~~dg~v~vwd~~~~~~~~~~~-~~~~~v~~~~~s~d~~~l--~s~s~d~~v~iwd~~~-----~~~~~~ 1122 (1249)
T 3sfz_A 1051 RLLQDSRLLSWSFDGTVKVWNVITGRIERDFT-CHQGTVLSCAISSDATKF--SSTSADKTAKIWSFDL-----LSPLHE 1122 (1249)
T ss_dssp EECSSSEEEEEESSSEEEEEETTTTCCCEEEE-CCSSCCCCEEECSSSSSC--EEECCSSCCCEECSSS-----SSCSBC
T ss_pred EEcCCCcEEEEECCCcEEEEECCCCceeEEEc-ccCCcEEEEEECCCCCEE--EEEcCCCcEEEEECCC-----cceeee
Confidence 999988766543 89999 56677 899999999999 4566 9999999999999976 566778
Q ss_pred ecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 149 FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 149 ~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
+.+|...|.+++|+|+|++|++++.||.|++||+.+++....
T Consensus 1123 l~~h~~~v~~~~~s~dg~~lat~~~dg~i~vwd~~~~~~~~~ 1164 (1249)
T 3sfz_A 1123 LKGHNGCVRCSAFSLDGILLATGDDNGEIRIWNVSDGQLLHS 1164 (1249)
T ss_dssp CCCCSSCEEEEEECSSSSEEEEEETTSCCCEEESSSSCCCCC
T ss_pred eccCCCcEEEEEECCCCCEEEEEeCCCEEEEEECCCCceEEE
Confidence 889999999999999999999999999999999998776544
No 112
>2vdu_B TRNA (guanine-N(7)-)-methyltransferase- associated WD repeat protein TRM82; S-adenosyl-L-methionine, tRNA processing, phosphorylation, M7G, spout MT, WD repeat; 2.40A {Saccharomyces cerevisiae}
Probab=99.89 E-value=6.3e-21 Score=146.38 Aligned_cols=166 Identities=11% Similarity=0.031 Sum_probs=130.5
Q ss_pred cccccccceeeee--e-----eec--CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee-ccCC
Q psy13207 6 LQSEKCLNQWTRR--S-----NLV--DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV-ACPT 75 (197)
Q Consensus 6 ~~~~~~~~~w~~~--~-----~~~--~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~-~~~~ 75 (197)
+..++.+++|++. . .+. .|...|.+++|+|+ +.+|++|+.||.+++|++.+...... ....+ .+..
T Consensus 121 ~~~dg~v~iwd~~~~~~~~~~~~~~~~~~~~v~~~~~sp~--~~~l~~~~~~g~v~~~~~~~~~~~~~--~~~~~~~h~~ 196 (450)
T 2vdu_B 121 ADSDKSLLVFDVDKTSKNVLKLRKRFCFSKRPNAISIAED--DTTVIIADKFGDVYSIDINSIPEEKF--TQEPILGHVS 196 (450)
T ss_dssp EGGGTEEEEEEECSSSSSCEEEEEEEECSSCEEEEEECTT--SSEEEEEETTSEEEEEETTSCCCSSC--CCCCSEECSS
T ss_pred ECCCCeEEEEECcCCCCceeeeeecccCCCCceEEEEcCC--CCEEEEEeCCCcEEEEecCCcccccc--cceeeecccC
Confidence 3467899999987 2 233 57789999999999 99999999999999999987654320 01111 2367
Q ss_pred CeeeEEEccC---CCcccce-----eEEEE------eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcc
Q psy13207 76 LASCLTWNHS---FSRFNSI-----SIMYE------AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTR 140 (197)
Q Consensus 76 ~~~~~~~~~~---~~~~~~~-----~~~~~------~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~ 140 (197)
.+.+++|+|+ +++++++ +++|+ +..+..+|...|.+++|+ +..+ ++++.|+.|++||+++
T Consensus 197 ~v~~~~~sp~~~~~~~l~s~~~d~~i~vwd~~~~~~~~~~~~~h~~~v~~~~~sd~~~l--~s~~~d~~v~vwd~~~--- 271 (450)
T 2vdu_B 197 MLTDVHLIKDSDGHQFIITSDRDEHIKISHYPQCFIVDKWLFGHKHFVSSICCGKDYLL--LSAGGDDKIFAWDWKT--- 271 (450)
T ss_dssp CEEEEEEEECTTSCEEEEEEETTSCEEEEEESCTTCEEEECCCCSSCEEEEEECSTTEE--EEEESSSEEEEEETTT---
T ss_pred ceEEEEEcCCCCCCcEEEEEcCCCcEEEEECCCCceeeeeecCCCCceEEEEECCCCEE--EEEeCCCeEEEEECCC---
Confidence 8999999999 8888765 89999 334222799999999998 5555 9999999999999987
Q ss_pred cceeeeeeec-------------------------CceecEEEEEEccCCCEEEEEe-CCCcEEEEEc
Q psy13207 141 FDIETIGNFE-------------------------DHYCTVWRVSWNITGTIVASSG-DDGCVRLWKL 182 (197)
Q Consensus 141 ~~~~~~~~~~-------------------------~h~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~ 182 (197)
.+.+..+. .....|.+++|+|++++|++++ .|+.|++|++
T Consensus 272 --~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~i~~~~~~~~l~~~~~~d~~i~iw~~ 337 (450)
T 2vdu_B 272 --GKNLSTFDYNSLIKPYLNDQHLAPPRFQNENNDIIEFAVSKIIKSKNLPFVAFFVEATKCIIILEM 337 (450)
T ss_dssp --CCEEEEEECHHHHGGGCCTTSBC----------CBCCCEEEEEECSSSSEEEEEETTCSEEEEEEE
T ss_pred --CcEeeeecchhhhhhhhhhcccccccccccccccceEEEEEEEEeCCCCEEEEEECCCCeEEEEEe
Confidence 34444443 2235689999999999999999 8999999999
No 113
>2j04_A TAU60, YPL007P, hypothetical protein YPL007C; beta propeller, type 2 promoters, transcription, hypothetica protein, preinitiation complex, yeast RNA polymerase III; 3.2A {Saccharomyces cerevisiae}
Probab=99.88 E-value=1.1e-21 Score=152.00 Aligned_cols=165 Identities=9% Similarity=0.121 Sum_probs=125.6
Q ss_pred cccccccceeee---eeeecCCCc-----ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccccc-ceeccceec----
Q psy13207 6 LQSEKCLNQWTR---RSNLVDSRT-----SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLS-QWCLQHEVA---- 72 (197)
Q Consensus 6 ~~~~~~~~~w~~---~~~~~~h~~-----~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~-~~~~~~~~~---- 72 (197)
...++++++|+. ...+. |.. .|.+++|+|+ |++||+|+.||+|+|||+.++.... .+....++.
T Consensus 103 ~s~dg~V~iwd~~~~l~~l~-~~~~~~~~sv~svafSPD--G~~LAsgs~DGtVkIWd~~~~~l~~~~~i~l~ti~~~~~ 179 (588)
T 2j04_A 103 LSNNGNVSVFKDNKMLTNLD-SKGNLSSRTYHCFEWNPI--ESSIVVGNEDGELQFFSIRKNSENTPEFYFESSIRLSDA 179 (588)
T ss_dssp EETTSCEEEEETTEEEEECC-CSSCSTTTCEEEEEECSS--SSCEEEEETTSEEEEEECCCCTTTCCCCEEEEEEECSCT
T ss_pred EeCCCcEEEEeCCceeeecc-CCCccccccEEEEEEcCC--CCEEEEEcCCCEEEEEECCCCccccccceeeeeeecccc
Confidence 356889999984 33456 665 4999999999 9999999999999999998864211 111122321
Q ss_pred -cCCCeeeEEEccCCCcccce----eEEEEe---------eEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCC
Q psy13207 73 -CPTLASCLTWNHSFSRFNSI----SIMYEA---------HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMG 138 (197)
Q Consensus 73 -~~~~~~~~~~~~~~~~~~~~----~~~~~~---------~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~ 138 (197)
+...|.+++|+|++ .++++ +++|++ ..+..+|...|.+++|+++.+ ++++ ++.|++||..+
T Consensus 180 gh~~~V~sVawSPdg-Laass~D~tVrlWd~~~~~~~~~~~tL~~~h~~~V~svaFsg~~L--ASa~-~~tIkLWd~~~- 254 (588)
T 2j04_A 180 GSKDWVTHIVWYEDV-LVAALSNNSVFSMTVSASSHQPVSRMIQNASRRKITDLKIVDYKV--VLTC-PGYVHKIDLKN- 254 (588)
T ss_dssp TCCCCEEEEEEETTE-EEEEETTCCEEEECCCSSSSCCCEEEEECCCSSCCCCEEEETTEE--EEEC-SSEEEEEETTT-
T ss_pred cccccEEEEEEcCCc-EEEEeCCCeEEEEECCCCccccceeeecccccCcEEEEEEECCEE--EEEe-CCeEEEEECCC-
Confidence 24689999999999 44333 899991 235327889999999996666 7776 69999999975
Q ss_pred cccceeeeeeecCceecEEEEEE--ccCCCEEEEEeCCCcEEEEEcC
Q psy13207 139 TRFDIETIGNFEDHYCTVWRVSW--NITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 139 ~~~~~~~~~~~~~h~~~v~~~~~--~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
........+|...|+.++| +|++..+++++.||+ ++|..+
T Consensus 255 ----~~~~~~~~gh~~~V~~va~~~s~d~~~La~a~edG~-klw~~d 296 (588)
T 2j04_A 255 ----YSISSLKTGSLENFHIIPLNHEKESTILLMSNKTSY-KVLLED 296 (588)
T ss_dssp ----TEEEEEECSCCSCCCEEEETTCSSCEEEEECSSCEE-EEEESS
T ss_pred ----CeEEEEEcCCCceEEEEEeeeCCCCCEEEEEcCCCC-EEEeec
Confidence 3332333379999999999 999999999999999 999975
No 114
>4gq1_A NUP37; propeller, transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4gq2_P 4fhl_A 4fhm_A 4fhn_A
Probab=99.88 E-value=1.4e-21 Score=147.78 Aligned_cols=169 Identities=12% Similarity=0.133 Sum_probs=115.2
Q ss_pred cccccccceeeeee-----eecCCCcceeEEEECCCCCC-cEEEEEeCCCcEEEEEcCCcccccceeccc----------
Q psy13207 6 LQSEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLG-LVLATCAADGLVRIYEAPDVMNLSQWCLQH---------- 69 (197)
Q Consensus 6 ~~~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~-~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~---------- 69 (197)
+..|+++++|++.. .+.+|.++|.+++|+|+ + .+|++++.||+|++||+.+++.........
T Consensus 162 ~s~D~tv~~Wd~~~~~~~~~~~~~~~~v~~v~~~p~--~~~~l~~~~~d~~v~~wd~~t~~~~~~~~~~~~~~~~~~~s~ 239 (393)
T 4gq1_A 162 VGDDCTLIIWRLTDEGPILAGYPLSSPGISVQFRPS--NPNQLIVGERNGNIRIFDWTLNLSAEENSQTELVKNPWLLTL 239 (393)
T ss_dssp EETTSEEEEEEEETTEEEEEEEECSSCEEEEEEETT--EEEEEEEEETTSEEEEEETTCCC----------CSCCCSEEE
T ss_pred EECCCeEEEEECCCCceeeeecCCCCCcEEEEECCC--CCceEEecCCCCEEEEEECCCCcccccccccCCcccceEEec
Confidence 46799999999753 46689999999999997 5 589999999999999998765432211000
Q ss_pred ----------eeccCCCeeeEEEc-cCCCcccce-----eEEEEee------EecccCCCcee-----------------
Q psy13207 70 ----------EVACPTLASCLTWN-HSFSRFNSI-----SIMYEAH------SINAEHKDLIH----------------- 110 (197)
Q Consensus 70 ----------~~~~~~~~~~~~~~-~~~~~~~~~-----~~~~~~~------~~~~~~~~~i~----------------- 110 (197)
...+...+.++.|. +++..++++ +++|++. .+. .|...+.
T Consensus 240 ~~~~~~~~~~~~~~~~~v~~v~~~~~dg~~l~s~s~d~~i~vwd~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~~~~~~~ 318 (393)
T 4gq1_A 240 NTLPLVNTCHSSGIASSLANVRWIGSDGSGILAMCKSGAWLRWNLFANNDYNEIS-DSTMKLGPKNLLPNVQGISLFPSL 318 (393)
T ss_dssp ESGGGC------CCSSSCSEEEEETTTTCEEEEECTTSEEEEEEC--------------------CCSCSEEEECSSCCS
T ss_pred ccccceeeeecccccccceeeeeecCCCCEEEEEeCCCCEEEEECccCCCCceEe-eecCccccEEEccccccccccCcc
Confidence 00124567888886 788887665 7999821 121 2222222
Q ss_pred -EEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 111 -DVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 111 -~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
...|+ .+..++++|+.|+.|++||..+ ......+.+|..+|.+++|+|||++||+++.|| +.+|.+.
T Consensus 319 ~~~~~~~~~~~~~~~sgs~Dg~V~lwd~~~-----~~~~~~~~~~~~~V~svafspdG~~LA~as~~G-v~lvrL~ 388 (393)
T 4gq1_A 319 LGACPHPRYMDYFATAHSQHGLIQLINTYE-----KDSNSIPIQLGMPIVDFCWHQDGSHLAIATEGS-VLLTRLM 388 (393)
T ss_dssp SCCEECSSCTTEEEEEETTTTEEEEEETTC-----TTCCEEEEECSSCEEEEEECTTSSEEEEEESSE-EEEEEEG
T ss_pred eeEEEccCCCCEEEEEECCCCEEEEEECCC-----CcEEEEecCCCCcEEEEEEcCCCCEEEEEeCCC-eEEEEEe
Confidence 22333 3444558889999999999976 455555667888999999999999999998765 5556543
No 115
>3mmy_A MRNA export factor; mRNA export, nuclear protein; HET: MES; 1.65A {Homo sapiens}
Probab=99.88 E-value=1.3e-21 Score=145.36 Aligned_cols=170 Identities=12% Similarity=0.153 Sum_probs=126.7
Q ss_pred cccccccceeeeee----eecCCCcceeEEEE--CCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccce---------
Q psy13207 6 LQSEKCLNQWTRRS----NLVDSRTSVTDVKF--GPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHE--------- 70 (197)
Q Consensus 6 ~~~~~~~~~w~~~~----~~~~h~~~v~~~~~--~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~--------- 70 (197)
+..++.+++|++.. .+.+|..+|.++.| +|+ +.+|++++.||.|++||+++++.+..+.....
T Consensus 104 ~~~dg~v~iwd~~~~~~~~~~~~~~~v~~~~~~~~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~~~~~~ 181 (368)
T 3mmy_A 104 ASCDKTAKMWDLSSNQAIQIAQHDAPVKTIHWIKAPN--YSCVMTGSWDKTLKFWDTRSSNPMMVLQLPERCYCADVIYP 181 (368)
T ss_dssp EETTSEEEEEETTTTEEEEEEECSSCEEEEEEEECSS--CEEEEEEETTSEEEEECSSCSSCSEEEECSSCEEEEEEETT
T ss_pred EcCCCcEEEEEcCCCCceeeccccCceEEEEEEeCCC--CCEEEEccCCCcEEEEECCCCcEEEEEecCCCceEEEecCC
Confidence 45688999998642 36679999999999 887 99999999999999999988765544332110
Q ss_pred -------------------------ec--cCCCeeeEEEccCCCc----ccce-----eEEEE---------eeEecccC
Q psy13207 71 -------------------------VA--CPTLASCLTWNHSFSR----FNSI-----SIMYE---------AHSINAEH 105 (197)
Q Consensus 71 -------------------------~~--~~~~~~~~~~~~~~~~----~~~~-----~~~~~---------~~~~~~~~ 105 (197)
.. ......++.+.++... ++++ +++|+ +..+. .|
T Consensus 182 ~~~~~~~~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~dg~i~i~~~~~~~~~~~~~~~~-~~ 260 (368)
T 3mmy_A 182 MAVVATAERGLIVYQLENQPSEFRRIESPLKHQHRCVAIFKDKQNKPTGFALGSIEGRVAIHYINPPNPAKDNFTFK-CH 260 (368)
T ss_dssp EEEEEEGGGCEEEEECSSSCEEEEECCCSCSSCEEEEEEEECTTSCEEEEEEEETTSEEEEEESSCSCHHHHSEEEE-CS
T ss_pred eeEEEeCCCcEEEEEeccccchhhhccccccCCCceEEEcccCCCCCCeEEEecCCCcEEEEecCCCCccccceeee-ee
Confidence 00 0233455555555443 4443 68998 33444 55
Q ss_pred CC------------ceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeC
Q psy13207 106 KD------------LIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGD 173 (197)
Q Consensus 106 ~~------------~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~ 173 (197)
.. .|.+++|+++.-+|++++.||.|++||+++ .+++..+.+|...|.+++|+|+|++|++++.
T Consensus 261 ~~~~~~~~~~~~~~~v~~~~~sp~~~~l~s~~~dg~i~iwd~~~-----~~~~~~~~~~~~~v~~~~~s~~g~~l~~~s~ 335 (368)
T 3mmy_A 261 RSNGTNTSAPQDIYAVNGIAFHPVHGTLATVGSDGRFSFWDKDA-----RTKLKTSEQLDQPISACCFNHNGNIFAYASS 335 (368)
T ss_dssp EEC----CCCEEECCEEEEEECTTTCCEEEEETTSCEEEEETTT-----TEEEEECCCCSSCEEEEEECTTSSCEEEEEC
T ss_pred ecccccccccccccceEEEEEecCCCEEEEEccCCeEEEEECCC-----CcEEEEecCCCCCceEEEECCCCCeEEEEec
Confidence 54 699999994433339999999999999986 6778888999999999999999999999999
Q ss_pred CCcEEEEEcC
Q psy13207 174 DGCVRLWKLK 183 (197)
Q Consensus 174 dg~i~iw~~~ 183 (197)
|+..+.|++-
T Consensus 336 d~~~~~~~~~ 345 (368)
T 3mmy_A 336 YDWSKGHEFY 345 (368)
T ss_dssp CCSTTCGGGC
T ss_pred cccccccccc
Confidence 8866655543
No 116
>1yfq_A Cell cycle arrest protein BUB3; WD repeat WD40 repeat beta transducin repeat all beta, signaling protein; 1.10A {Saccharomyces cerevisiae} SCOP: b.69.4.2 PDB: 1u4c_A 2i3s_A 2i3t_A
Probab=99.88 E-value=3.8e-21 Score=141.95 Aligned_cols=168 Identities=8% Similarity=-0.068 Sum_probs=132.1
Q ss_pred cccccccceeeee--------eeecCCCcceeEEEECCCCCCc-EEEEEeCCCcEEEEEc-CCcccccceeccceeccCC
Q psy13207 6 LQSEKCLNQWTRR--------SNLVDSRTSVTDVKFGPKQLGL-VLATCAADGLVRIYEA-PDVMNLSQWCLQHEVACPT 75 (197)
Q Consensus 6 ~~~~~~~~~w~~~--------~~~~~h~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iw~~-~~~~~~~~~~~~~~~~~~~ 75 (197)
+..++.+++|++. ..+.+|...|.+++|+|+ ++ +|++|+.||.|++||+ .+.+. ..+. ...+..
T Consensus 29 ~~~d~~v~iw~~~~~~~~~~~~~~~~~~~~v~~~~~~~~--~~~~l~~~~~dg~i~~wd~~~~~~~-~~~~---~~~~~~ 102 (342)
T 1yfq_A 29 TSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDN--TDLQIYVGTVQGEILKVDLIGSPSF-QALT---NNEANL 102 (342)
T ss_dssp EETTSEEEEEEEETTTTEEEEEEEEECSSCEEEEEEEES--SSEEEEEEETTSCEEEECSSSSSSE-EECB---SCCCCS
T ss_pred EcCCCeEEEEEeCCCCccccceeeeecCCceEEEEECCC--CCcEEEEEcCCCeEEEEEeccCCce-Eecc---ccCCCC
Confidence 3567889999864 235589999999999998 99 9999999999999999 76643 1111 001467
Q ss_pred CeeeEEEccCCCcccce-----eEEEEeeE---------ec----ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccC
Q psy13207 76 LASCLTWNHSFSRFNSI-----SIMYEAHS---------IN----AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVM 137 (197)
Q Consensus 76 ~~~~~~~~~~~~~~~~~-----~~~~~~~~---------~~----~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~ 137 (197)
.+.+++|+| +..++++ +++|++.. .. -.|...+.+++|+++.+ ++++.|+.|++||+++
T Consensus 103 ~v~~l~~~~-~~~l~s~~~d~~i~iwd~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l--~~~~~d~~i~i~d~~~ 179 (342)
T 1yfq_A 103 GICRICKYG-DDKLIAASWDGLIEVIDPRNYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRL--IVGMNNSQVQWFRLPL 179 (342)
T ss_dssp CEEEEEEET-TTEEEEEETTSEEEEECHHHHTTBCEEEEESCSSSSSSCCCEEEEEECSSEE--EEEESTTEEEEEESSC
T ss_pred ceEEEEeCC-CCEEEEEcCCCeEEEEcccccccccccccCCeeeEEeeCCceEEEEecCCcE--EEEeCCCeEEEEECCc
Confidence 899999999 7777655 79999443 21 13778899999997777 9999999999999975
Q ss_pred -CcccceeeeeeecCceecEEEEEEcc-CCCEEEEEeCCCcEEEEEcCCC
Q psy13207 138 -GTRFDIETIGNFEDHYCTVWRVSWNI-TGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 138 -~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
.. .........|...|.+++|+| +++++++++.||.|++|+++..
T Consensus 180 ~~~---~~~~~~~~~~~~~i~~i~~~~~~~~~l~~~~~dg~i~i~~~~~~ 226 (342)
T 1yfq_A 180 CED---DNGTIEESGLKYQIRDVALLPKEQEGYACSSIDGRVAVEFFDDQ 226 (342)
T ss_dssp CTT---CCCEEEECSCSSCEEEEEECSGGGCEEEEEETTSEEEEEECCTT
T ss_pred ccc---ccceeeecCCCCceeEEEECCCCCCEEEEEecCCcEEEEEEcCC
Confidence 21 112233456788999999999 9999999999999999999876
No 117
>1pgu_A Actin interacting protein 1; WD repeat, seven-bladed beta-propeller, protein binding; 2.30A {Saccharomyces cerevisiae} SCOP: b.69.4.1 b.69.4.1 PDB: 1pi6_A
Probab=99.88 E-value=7.2e-21 Score=150.43 Aligned_cols=170 Identities=16% Similarity=0.253 Sum_probs=137.4
Q ss_pred cccccccceeeee-------------eeecCCCcceeEEEECCCCCCcEEEEEeCC----CcEEEEEcCCcccccceecc
Q psy13207 6 LQSEKCLNQWTRR-------------SNLVDSRTSVTDVKFGPKQLGLVLATCAAD----GLVRIYEAPDVMNLSQWCLQ 68 (197)
Q Consensus 6 ~~~~~~~~~w~~~-------------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~d----g~v~iw~~~~~~~~~~~~~~ 68 (197)
+..++.+++|++. ..+..|..+|.+++|+|+ +++|++++.+ +.|.+||. ++.+..+
T Consensus 84 ~~~dg~v~vw~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~s~~--~~~l~~~~~~~~~~~~v~~~d~--~~~~~~~--- 156 (615)
T 1pgu_A 84 GDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDFE--GRRLCVVGEGRDNFGVFISWDS--GNSLGEV--- 156 (615)
T ss_dssp EETTSEEEEEEEEEEGGGTEEEEEEEEEEECCSSCEEEEEECTT--SSEEEEEECCSSCSEEEEETTT--CCEEEEC---
T ss_pred ecCCCEEEEEeCCCCcccccccccccchhhcccccEEEEEEeCC--CCEEEEeccCCCCccEEEEEEC--CCcceee---
Confidence 3568899999984 136679999999999999 9999999988 78888883 2222111
Q ss_pred ceeccCCCeeeEEEccCCC-cccce-----eEEEE------eeEecccCCC---ceeEEEEcCC-CeEEEEeeCCCeEEE
Q psy13207 69 HEVACPTLASCLTWNHSFS-RFNSI-----SIMYE------AHSINAEHKD---LIHDVAYDYY-GLRMATCSSDQNIKV 132 (197)
Q Consensus 69 ~~~~~~~~~~~~~~~~~~~-~~~~~-----~~~~~------~~~~~~~~~~---~i~~~~~~~~-~~~~~s~~~d~~i~~ 132 (197)
..+...+.+++|+|++. .++++ +++|+ +..+. .|.. .|.+++|+++ .-+|++++.|+.|++
T Consensus 157 --~~~~~~v~~~~~~~~~~~~l~~~~~d~~v~vwd~~~~~~~~~~~-~~~~~~~~v~~~~~~~~~~~~l~~~~~dg~i~v 233 (615)
T 1pgu_A 157 --SGHSQRINACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDR-THHKQGSFVRDVEFSPDSGEFVITVGSDRKISC 233 (615)
T ss_dssp --CSCSSCEEEEEECSSSSCEEEEEETTTEEEEEETTTBEEEEEEC-SSSCTTCCEEEEEECSTTCCEEEEEETTCCEEE
T ss_pred --ecCCccEEEEEECCCCCcEEEEEeCCCcEEEEeCCCcceeeeec-ccCCCCceEEEEEECCCCCCEEEEEeCCCeEEE
Confidence 12367899999999998 45544 89999 55666 7888 9999999966 545599999999999
Q ss_pred EEccCCcccceeeeeee-c---CceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 133 TRDVMGTRFDIETIGNF-E---DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 133 ~d~~~~~~~~~~~~~~~-~---~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
||+++ .+.+..+ . .|...|.+++|+ ++++|++++.|+.|++||+++++....+
T Consensus 234 wd~~~-----~~~~~~~~~~~~~~~~~v~~~~~~-~~~~l~~~~~d~~i~~wd~~~~~~~~~~ 290 (615)
T 1pgu_A 234 FDGKS-----GEFLKYIEDDQEPVQGGIFALSWL-DSQKFATVGADATIRVWDVTTSKCVQKW 290 (615)
T ss_dssp EETTT-----CCEEEECCBTTBCCCSCEEEEEES-SSSEEEEEETTSEEEEEETTTTEEEEEE
T ss_pred EECCC-----CCEeEEecccccccCCceEEEEEc-CCCEEEEEcCCCcEEEEECCCCcEEEEE
Confidence 99976 5667777 5 899999999999 9999999999999999999987655443
No 118
>2ovr_B FBW7, F-BOX/WD repeat protein 7, F-box PROT; WD40 domains, double phosphorylation, transcription-C complex; HET: TPO; 2.50A {Homo sapiens} SCOP: a.158.1.1 b.69.4.1 PDB: 2ovp_B* 2ovq_B*
Probab=99.88 E-value=9.3e-21 Score=145.09 Aligned_cols=162 Identities=15% Similarity=0.220 Sum_probs=128.1
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..++.+++|+.. ..+.+|...|.++.| + +..+++++.||.|++||+.+++.+..+. .+...+.++
T Consensus 255 ~~~dg~i~iwd~~~~~~~~~~~~~~~~v~~~~~--~--~~~l~~~~~d~~i~i~d~~~~~~~~~~~-----~~~~~v~~~ 325 (445)
T 2ovr_B 255 GAYDFMVKVWDPETETCLHTLQGHTNRVYSLQF--D--GIHVVSGSLDTSIRVWDVETGNCIHTLT-----GHQSLTSGM 325 (445)
T ss_dssp EETTSCEEEEEGGGTEEEEEECCCSSCEEEEEE--C--SSEEEEEETTSCEEEEETTTCCEEEEEC-----CCCSCEEEE
T ss_pred EcCCCEEEEEECCCCcEeEEecCCCCceEEEEE--C--CCEEEEEeCCCeEEEEECCCCCEEEEEc-----CCcccEEEE
Confidence 3567888999753 457889999999999 5 7789999999999999998876543322 124556666
Q ss_pred EEccCCCcccce-----eEEEE------eeEecc--cCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeee
Q psy13207 81 TWNHSFSRFNSI-----SIMYE------AHSINA--EHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIG 147 (197)
Q Consensus 81 ~~~~~~~~~~~~-----~~~~~------~~~~~~--~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 147 (197)
.++ +..++++ +++|| +..+.. .|...|.+++|+++.+ ++++.||.|++||+++ ++.+.
T Consensus 326 ~~~--~~~l~~~~~dg~i~vwd~~~~~~~~~~~~~~~~~~~v~~~~~~~~~l--~s~~~dg~v~iwd~~~-----~~~~~ 396 (445)
T 2ovr_B 326 ELK--DNILVSGNADSTVKIWDIKTGQCLQTLQGPNKHQSAVTCLQFNKNFV--ITSSDDGTVKLWDLKT-----GEFIR 396 (445)
T ss_dssp EEE--TTEEEEEETTSCEEEEETTTCCEEEEECSTTSCSSCEEEEEECSSEE--EEEETTSEEEEEETTT-----CCEEE
T ss_pred EEe--CCEEEEEeCCCeEEEEECCCCcEEEEEccCCCCCCCEEEEEECCCEE--EEEeCCCeEEEEECCC-----Cceee
Confidence 664 5566554 79999 445541 2888999999998888 9999999999999987 45555
Q ss_pred ee-----cCceecEEEEEEccCCCEEEEEeCCCc----EEEEEcCCC
Q psy13207 148 NF-----EDHYCTVWRVSWNITGTIVASSGDDGC----VRLWKLKKK 185 (197)
Q Consensus 148 ~~-----~~h~~~v~~~~~~p~~~~l~~~~~dg~----i~iw~~~~~ 185 (197)
.+ ..|...|++++|+|++.++++|+.||+ +.+||++..
T Consensus 397 ~~~~~~~~~~~~~v~~~~~s~~~~~la~~~~dg~~~~~l~v~df~~~ 443 (445)
T 2ovr_B 397 NLVTLESGGSGGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDFDVD 443 (445)
T ss_dssp EEEECTTGGGTCEEEEEEECSSEEEEEEECSSSSSCCEEEEEECCCC
T ss_pred eeeccccCCCCceEEEEEecCCEEEEEEcccCCCCccEEEEEECCCC
Confidence 55 467889999999999999999999998 999999764
No 119
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.87 E-value=2e-20 Score=139.64 Aligned_cols=157 Identities=13% Similarity=0.217 Sum_probs=119.4
Q ss_pred ccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCc-ccccceeccceeccCCCeeeE
Q psy13207 7 QSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDV-MNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~ 80 (197)
..++++++|+.. ..+. |..+|.++.|+++ . ++.+ .|+.|++||+.+. +.+..+.. +...+
T Consensus 78 ~~d~~v~iWd~~~~~~~~~~~-~~~~v~~v~~~~~--~--~~~~-~~~~i~i~d~~~~~~~~~~~~~--------~~~~~ 143 (355)
T 3vu4_A 78 GVKEVVHIWDDVKKQDVSRIK-VDAPVKDLFLSRE--F--IVVS-YGDVISVFKFGNPWKRITDDIR--------FGGVC 143 (355)
T ss_dssp SSTTEEEEEETTTTEEEEEEE-CSSCEEEEEECSS--E--EEEE-ETTEEEEEESSTTCCBSSCCEE--------EEEEE
T ss_pred CCccEEEEEECCCCcEEEEEE-CCCceEEEEEcCC--E--EEEE-EcCEEEEEECCCCceeeEEecc--------CCceE
Confidence 445789999864 2343 6779999999986 3 3333 4789999999887 54443332 23344
Q ss_pred EEccCCCcccc-------eeEEEEee----------------------EecccCCCceeEEEEcCCCeEEEEeeCCCe-E
Q psy13207 81 TWNHSFSRFNS-------ISIMYEAH----------------------SINAEHKDLIHDVAYDYYGLRMATCSSDQN-I 130 (197)
Q Consensus 81 ~~~~~~~~~~~-------~~~~~~~~----------------------~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~-i 130 (197)
++++ ..++. .+++||+. .+. +|...|.+++|+++.-+|++|+.|++ |
T Consensus 144 ~~s~--~~la~~sg~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~-~h~~~v~~~~~s~~g~~l~s~s~d~~~v 220 (355)
T 3vu4_A 144 EFSN--GLLVYSNEFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIK-AHTNPIKMVRLNRKSDMVATCSQDGTII 220 (355)
T ss_dssp EEET--TEEEEEESSCTTCEEEEECCC------------------CCEEEC-CCSSCEEEEEECTTSSEEEEEETTCSEE
T ss_pred EEEc--cEEEEeCCCcCcEEEEEECCCCCccccccccccccccCcccEEEE-ccCCceEEEEECCCCCEEEEEeCCCCEE
Confidence 5555 33332 27899932 345 89999999999955545599999998 9
Q ss_pred EEEEccCCcccceeeeeeec-C-ceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 131 KVTRDVMGTRFDIETIGNFE-D-HYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~-~-h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
++||+++ .+++..+. + |...|.+++|+|++++|++++.|++|++||++..
T Consensus 221 ~iwd~~~-----~~~~~~~~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~ 272 (355)
T 3vu4_A 221 RVFKTED-----GVLVREFRRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFND 272 (355)
T ss_dssp EEEETTT-----CCEEEEEECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCC
T ss_pred EEEECCC-----CcEEEEEEcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCC
Confidence 9999987 67777777 5 9999999999999999999999999999999764
No 120
>4ggc_A P55CDC, cell division cycle protein 20 homolog; cell cycle, mitosis, securin, ubiquitination, WD40; HET: MRD; 1.35A {Homo sapiens}
Probab=99.86 E-value=8e-20 Score=133.44 Aligned_cols=146 Identities=17% Similarity=0.266 Sum_probs=121.4
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE----
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE---- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---- 97 (197)
..++|+|+++ + +||+| .|++|+|||+.+++.++.+... .+...|.+++|+|++++++++ +++|+
T Consensus 27 y~~~l~WS~~--~-~lAvg-~D~tV~iWd~~tg~~~~~~~~~---~~~~~V~~v~~~~~~~~l~sgs~Dg~v~iw~~~~~ 99 (318)
T 4ggc_A 27 YLNLVDWSSG--N-VLAVA-LDNSVYLWSASSGDILQLLQME---QPGEYISSVAWIKEGNYLAVGTSSAEVQLWDVQQQ 99 (318)
T ss_dssp TCBCEEECTT--S-EEEEE-ETTEEEEEETTTCCEEEEEECC---STTCCEEEEEECTTSSEEEEEETTSEEEEEETTTT
T ss_pred cceEEEECCC--C-EEEEE-eCCEEEEEECCCCCEEEEEEec---CCCCeEEEEEECCCCCEEEEEECCCcEEEeecCCc
Confidence 3578999986 5 66665 5999999999988765433321 125679999999999999876 89999
Q ss_pred --eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC
Q psy13207 98 --AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG 175 (197)
Q Consensus 98 --~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg 175 (197)
+..+. +|...+.++.+.+..+ ++++.++.+++|+.... ...+..+.+|...+..+.+++++++|++++.||
T Consensus 100 ~~~~~~~-~h~~~~~~~~~~~~~l--~s~~~~~~~~~~~~~~~----~~~~~~~~~~~~~~~~~~~~~~~~~l~s~~~d~ 172 (318)
T 4ggc_A 100 KRLRNMT-SHSARVGSLSWNSYIL--SSGSRSGHIHHHDVRVA----EHHVATLSGHSQEVCGLRWAPDGRHLASGGNDN 172 (318)
T ss_dssp EEEEEEE-CCSSCEEEEEEETTEE--EEEETTSEEEEEETTSS----SCEEEEEECCSSCEEEEEECTTSSEEEEEETTS
T ss_pred eeEEEec-CccceEEEeecCCCEE--EEEecCCceEeeecCCC----ceeEEEEcCccCceEEEEEcCCCCEEEEEecCc
Confidence 66677 8999999888888888 99999999999998753 456677888999999999999999999999999
Q ss_pred cEEEEEcCCCc
Q psy13207 176 CVRLWKLKKKR 186 (197)
Q Consensus 176 ~i~iw~~~~~~ 186 (197)
+|++||+++++
T Consensus 173 ~i~iwd~~~~~ 183 (318)
T 4ggc_A 173 LVNVWPSAPGE 183 (318)
T ss_dssp CEEEEESSCBT
T ss_pred ceeEEECCCCc
Confidence 99999998754
No 121
>3vu4_A KMHSV2; beta-propeller fold, protein transport; 2.60A {Kluyveromyces marxianus} PDB: 4av9_A 4av8_A 4exv_A
Probab=99.86 E-value=1.2e-20 Score=140.80 Aligned_cols=143 Identities=13% Similarity=0.198 Sum_probs=107.4
Q ss_pred cccccccceeeee---------------------eeecCCCcceeEEEECCCCCCcEEEEEeCCCc-EEEEEcCCccccc
Q psy13207 6 LQSEKCLNQWTRR---------------------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGL-VRIYEAPDVMNLS 63 (197)
Q Consensus 6 ~~~~~~~~~w~~~---------------------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~-v~iw~~~~~~~~~ 63 (197)
+..++.+++|++. ..+.+|.++|.+++|+|+ |++|++|+.|++ |++||+++++.+.
T Consensus 155 g~~~g~v~iwd~~~~~~~~~~~~~~~~~~~~p~~~~~~~h~~~v~~~~~s~~--g~~l~s~s~d~~~v~iwd~~~~~~~~ 232 (355)
T 3vu4_A 155 EFNLGQIHITKLQSSGSATTQDQGVQQKAILGKGVLIKAHTNPIKMVRLNRK--SDMVATCSQDGTIIRVFKTEDGVLVR 232 (355)
T ss_dssp SSCTTCEEEEECCC------------------CCEEECCCSSCEEEEEECTT--SSEEEEEETTCSEEEEEETTTCCEEE
T ss_pred CCcCcEEEEEECCCCCccccccccccccccCcccEEEEccCCceEEEEECCC--CCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 5678899999875 457899999999999998 999999999998 9999998875432
Q ss_pred ceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEeccc-CCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccc
Q psy13207 64 QWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAE-HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFD 142 (197)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~ 142 (197)
.+ ..+ |...|.+++|+++.-+|++++.|+.|++||++......
T Consensus 233 ~~------------------------------------~~g~h~~~v~~~~~s~~~~~l~s~s~d~~v~iw~~~~~~~~~ 276 (355)
T 3vu4_A 233 EF------------------------------------RRGLDRADVVDMKWSTDGSKLAVVSDKWTLHVFEIFNDQDNK 276 (355)
T ss_dssp EE------------------------------------ECTTCCSCEEEEEECTTSCEEEEEETTCEEEEEESSCCSCCC
T ss_pred EE------------------------------------EcCCCCCcEEEEEECCCCCEEEEEECCCEEEEEEccCCCCcc
Confidence 22 113 88889999999554444999999999999997532111
Q ss_pred eeeee-----------------ee-cCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 143 IETIG-----------------NF-EDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 143 ~~~~~-----------------~~-~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
...+. .+ ..+......++|+|+++++++++.||.+++|++...+
T Consensus 277 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~d~~~l~~~~~dg~~~~~~~~~~~ 338 (355)
T 3vu4_A 277 RHALKGWINMKYFQSEWSLCNFKLSVDKHVRGCKIAWISESSLVVVWPHTRMIETFKVVFDD 338 (355)
T ss_dssp SEETTTTEECCCCCCSSCSEEEECCCCTTCCCCEEEESSSSEEEEEETTTTEEEEEEEEEET
T ss_pred cccccceeeccccccccceeEEEeccCCCCCceEEEEeCCCCEEEEEeCCCeEEEEEEEcCC
Confidence 11100 00 0111223668999999999999999999999987644
No 122
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.83 E-value=3.3e-20 Score=141.97 Aligned_cols=127 Identities=13% Similarity=0.179 Sum_probs=96.9
Q ss_pred CCcceeEEEECCCCCCcEEE----EEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEee
Q psy13207 24 SRTSVTDVKFGPKQLGLVLA----TCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAH 99 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~----s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (197)
|...|.+++|+|+ +++|+ +|+.|+.|+|||+.+..... ... ...+.. +.
T Consensus 91 ~~~~v~~l~~spd--g~~lav~~~sgs~d~~v~iwd~~~~~~~~-~~~------~~~~~~------------------~~ 143 (434)
T 2oit_A 91 MKFPIHHLALSCD--NLTLSACMMSSEYGSIIAFFDVRTFSNEA-KQQ------KRPFAY------------------HK 143 (434)
T ss_dssp CSSCEEEEEECTT--SCEEEEEEEETTTEEEEEEEEHHHHHCTT-CSS------CCCSEE------------------EE
T ss_pred CCCcccEEEEcCC--CCEEEEEEeccCCCceEEEEEccccccCC-cCC------cceeee------------------ee
Confidence 5667999999999 99998 88999999999987541100 000 000000 12
Q ss_pred EecccCCCceeEEEEcCC-CeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEE
Q psy13207 100 SINAEHKDLIHDVAYDYY-GLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVR 178 (197)
Q Consensus 100 ~~~~~~~~~i~~~~~~~~-~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~ 178 (197)
.+. +|...|.+++|+++ .-+|++++.|+.|++||+++ ...+....+|...|.+++|+|+|++|++|+.||+|+
T Consensus 144 ~~~-~h~~~V~~v~~~p~~~~~las~s~Dg~v~iwD~~~-----~~~~~~~~~~~~~v~~v~wspdg~~lasgs~dg~v~ 217 (434)
T 2oit_A 144 LLK-DAGGMVIDMKWNPTVPSMVAVCLADGSIAVLQVTE-----TVKVCATLPSTVAVTSVCWSPKGKQLAVGKQNGTVV 217 (434)
T ss_dssp CCC-SGGGSEEEEEECSSCTTEEEEEETTSCEEEEEESS-----SEEEEEEECGGGCEEEEEECTTSSCEEEEETTSCEE
T ss_pred ccC-CCCCceEEEEECCCCCCEEEEEECCCeEEEEEcCC-----CcceeeccCCCCceeEEEEcCCCCEEEEEcCCCcEE
Confidence 223 78899999999943 33349999999999999986 344555567889999999999999999999999999
Q ss_pred EEEcC
Q psy13207 179 LWKLK 183 (197)
Q Consensus 179 iw~~~ 183 (197)
+||++
T Consensus 218 iwd~~ 222 (434)
T 2oit_A 218 QYLPT 222 (434)
T ss_dssp EECTT
T ss_pred EEccC
Confidence 99998
No 123
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.81 E-value=6.7e-18 Score=126.89 Aligned_cols=167 Identities=11% Similarity=0.044 Sum_probs=124.8
Q ss_pred cccccccceeeee-----eeecCCCcceeEEEECCCCCCcEE-EEEeCCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 6 LQSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVL-ATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 6 ~~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l-~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
+..++.+++|+.. ..+..|. .+.+++|+|+ ++++ ++++.|+.|++||+.+++.+.. +.....+.+
T Consensus 8 ~~~d~~v~v~d~~~~~~~~~~~~~~-~~~~~~~s~d--g~~l~~~~~~d~~i~v~d~~~~~~~~~------~~~~~~v~~ 78 (391)
T 1l0q_A 8 NSESDNISVIDVTSNKVTATIPVGS-NPMGAVISPD--GTKVYVANAHSNDVSIIDTATNNVIAT------VPAGSSPQG 78 (391)
T ss_dssp ETTTTEEEEEETTTTEEEEEEECSS-SEEEEEECTT--SSEEEEEEGGGTEEEEEETTTTEEEEE------EECSSSEEE
T ss_pred cCCCCEEEEEECCCCeEEEEeecCC-CcceEEECCC--CCEEEEECCCCCeEEEEECCCCeEEEE------EECCCCccc
Confidence 3567889999754 3455554 5899999998 8765 7888999999999988765433 233458899
Q ss_pred EEEccCCCcccc------eeEEEE------eeEecccCCCceeEEEEcCCCe-EEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 80 LTWNHSFSRFNS------ISIMYE------AHSINAEHKDLIHDVAYDYYGL-RMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 80 ~~~~~~~~~~~~------~~~~~~------~~~~~~~~~~~i~~~~~~~~~~-~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
++|+|++++++. .+++|| +..+. +...+.+++|+++.- ++++++.|+.|++||+++ .+.+
T Consensus 79 ~~~spdg~~l~~~~~~~~~v~v~d~~~~~~~~~~~--~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~-----~~~~ 151 (391)
T 1l0q_A 79 VAVSPDGKQVYVTNMASSTLSVIDTTSNTVAGTVK--TGKSPLGLALSPDGKKLYVTNNGDKTVSVINTVT-----KAVI 151 (391)
T ss_dssp EEECTTSSEEEEEETTTTEEEEEETTTTEEEEEEE--CSSSEEEEEECTTSSEEEEEETTTTEEEEEETTT-----TEEE
T ss_pred eEECCCCCEEEEEECCCCEEEEEECCCCeEEEEEe--CCCCcceEEECCCCCEEEEEeCCCCEEEEEECCC-----CcEE
Confidence 999999997643 289999 33333 455789999994432 236788899999999976 4555
Q ss_pred eeecCceecEEEEEEccCCCEE-EEEeCCCcEEEEEcCCCcchh
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIV-ASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l-~~~~~dg~i~iw~~~~~~~~~ 189 (197)
..+..+ ..+.+++|+|+++++ ++++.|+.|++||+++.+...
T Consensus 152 ~~~~~~-~~~~~~~~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 194 (391)
T 1l0q_A 152 NTVSVG-RSPKGIAVTPDGTKVYVANFDSMSISVIDTVTNSVID 194 (391)
T ss_dssp EEEECC-SSEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEE
T ss_pred EEEecC-CCcceEEECCCCCEEEEEeCCCCEEEEEECCCCeEEE
Confidence 555554 456899999999887 577789999999998865443
No 124
>1l0q_A Surface layer protein; SLP, S-layer, 7-bladed beta-propeller superfamily, protein binding; HET: YCM; 2.40A {Methanosarcina mazei} SCOP: b.1.3.1 b.69.2.3
Probab=99.78 E-value=2.9e-17 Score=123.42 Aligned_cols=167 Identities=8% Similarity=0.019 Sum_probs=123.0
Q ss_pred cccccceeeeee-----eecCCCcceeEEEECCCCCCcEE-EEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEE
Q psy13207 8 SEKCLNQWTRRS-----NLVDSRTSVTDVKFGPKQLGLVL-ATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81 (197)
Q Consensus 8 ~~~~~~~w~~~~-----~~~~h~~~v~~~~~~~~~~~~~l-~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~ 81 (197)
.++.+++|++.. .+. +...+.+++|+|+ ++.| ++++.|+.|++||+.+++....+ .....+.+++
T Consensus 94 ~~~~v~v~d~~~~~~~~~~~-~~~~~~~~~~s~d--g~~l~~~~~~~~~v~~~d~~~~~~~~~~------~~~~~~~~~~ 164 (391)
T 1l0q_A 94 ASSTLSVIDTTSNTVAGTVK-TGKSPLGLALSPD--GKKLYVTNNGDKTVSVINTVTKAVINTV------SVGRSPKGIA 164 (391)
T ss_dssp TTTEEEEEETTTTEEEEEEE-CSSSEEEEEECTT--SSEEEEEETTTTEEEEEETTTTEEEEEE------ECCSSEEEEE
T ss_pred CCCEEEEEECCCCeEEEEEe-CCCCcceEEECCC--CCEEEEEeCCCCEEEEEECCCCcEEEEE------ecCCCcceEE
Confidence 457888887642 333 3456899999998 8766 78888999999999887544322 2245678999
Q ss_pred EccCCCccc-ce-----eEEEE------eeEecccCCCceeEEEEcCCCeEEEEee---CCCeEEEEEccCCcccceeee
Q psy13207 82 WNHSFSRFN-SI-----SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCS---SDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 82 ~~~~~~~~~-~~-----~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~---~d~~i~~~d~~~~~~~~~~~~ 146 (197)
|+|+++.++ ++ +.+|| +..+ .+...+.+++|+++.-++++++ .++.|++||+++ .+.+
T Consensus 165 ~~~dg~~l~~~~~~~~~v~~~d~~~~~~~~~~--~~~~~~~~~~~~~~g~~l~~~~~~~~~~~v~~~d~~~-----~~~~ 237 (391)
T 1l0q_A 165 VTPDGTKVYVANFDSMSISVIDTVTNSVIDTV--KVEAAPSGIAVNPEGTKAYVTNVDKYFNTVSMIDTGT-----NKIT 237 (391)
T ss_dssp ECTTSSEEEEEETTTTEEEEEETTTTEEEEEE--ECSSEEEEEEECTTSSEEEEEEECSSCCEEEEEETTT-----TEEE
T ss_pred ECCCCCEEEEEeCCCCEEEEEECCCCeEEEEE--ecCCCccceEECCCCCEEEEEecCcCCCcEEEEECCC-----CeEE
Confidence 999998773 32 89999 2233 3567889999994432236666 689999999976 4556
Q ss_pred eeecCceecEEEEEEccCCCEE-EEEeCCCcEEEEEcCCCcchhhh
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIV-ASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l-~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
..+..|. .+.+++|+|+++++ ++++.|+.|++||+.+++....+
T Consensus 238 ~~~~~~~-~~~~~~~s~dg~~l~~s~~~d~~v~v~d~~~~~~~~~~ 282 (391)
T 1l0q_A 238 ARIPVGP-DPAGIAVTPDGKKVYVALSFXNTVSVIDTATNTITATM 282 (391)
T ss_dssp EEEECCS-SEEEEEECTTSSEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred EEEecCC-CccEEEEccCCCEEEEEcCCCCEEEEEECCCCcEEEEE
Confidence 6666554 47899999999877 66788999999999887654443
No 125
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.78 E-value=5e-17 Score=123.66 Aligned_cols=169 Identities=7% Similarity=-0.042 Sum_probs=125.9
Q ss_pred ccccccceeeee-----eeecCCCcceeEEEECCCCCCcEE-EEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 7 QSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVL-ATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l-~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
..++.+++|++. ..+..|...+.+++|+|+ +..+ ++++.|+.|++||+.+++.... +.....+.++
T Consensus 188 ~~d~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~--~~~l~~~~~~~~~i~~~d~~~~~~~~~------~~~~~~~~~~ 259 (433)
T 3bws_A 188 MQANAVHVFDLKTLAYKATVDLTGKWSKILLYDPI--RDLVYCSNWISEDISVIDRKTKLEIRK------TDKIGLPRGL 259 (433)
T ss_dssp GGGTEEEEEETTTCCEEEEEECSSSSEEEEEEETT--TTEEEEEETTTTEEEEEETTTTEEEEE------CCCCSEEEEE
T ss_pred CCCCEEEEEECCCceEEEEEcCCCCCeeEEEEcCC--CCEEEEEecCCCcEEEEECCCCcEEEE------ecCCCCceEE
Confidence 456788899753 356688899999999998 7766 5666899999999987754322 2234568999
Q ss_pred EEccCCCcccce-------------eEEEE-----eeEecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEccCCccc
Q psy13207 81 TWNHSFSRFNSI-------------SIMYE-----AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMGTRF 141 (197)
Q Consensus 81 ~~~~~~~~~~~~-------------~~~~~-----~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~~ 141 (197)
+|+|+++.++.+ +++|+ +.... .|...+.+++|+++. .++++++.|+.|++||.++
T Consensus 260 ~~~~~g~~l~~~~~~~~~~~~~dg~i~~~d~~~~~~~~~~-~~~~~~~~~~~~~~g~~l~~~~~~~~~v~v~d~~~---- 334 (433)
T 3bws_A 260 LLSKDGKELYIAQFSASNQESGGGRLGIYSMDKEKLIDTI-GPPGNKRHIVSGNTENKIYVSDMCCSKIEVYDLKE---- 334 (433)
T ss_dssp EECTTSSEEEEEEEESCTTCSCCEEEEEEETTTTEEEEEE-EEEECEEEEEECSSTTEEEEEETTTTEEEEEETTT----
T ss_pred EEcCCCCEEEEEECCCCccccCCCeEEEEECCCCcEEeec-cCCCCcceEEECCCCCEEEEEecCCCEEEEEECCC----
Confidence 999999887544 45898 22222 355678899999443 3447778999999999976
Q ss_pred ceeeeeeecCceecEEEEEEccCCCEEEEEeC---------------CCcEEEEEcCCCcchhh
Q psy13207 142 DIETIGNFEDHYCTVWRVSWNITGTIVASSGD---------------DGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 142 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~---------------dg~i~iw~~~~~~~~~~ 190 (197)
.+.+..+. +...+.+++|+|+|+++++++. ||.|++||+.+++....
T Consensus 335 -~~~~~~~~-~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~g~~dg~v~~~d~~~~~~~~~ 396 (433)
T 3bws_A 335 -KKVQKSIP-VFDKPNTIALSPDGKYLYVSCRGPNHPTEGYLKKGLVLGKVYVIDTTTDTVKEF 396 (433)
T ss_dssp -TEEEEEEE-CSSSEEEEEECTTSSEEEEEECCCCCTTTCTTSCCSSCCEEEEEETTTTEEEEE
T ss_pred -CcEEEEec-CCCCCCeEEEcCCCCEEEEEecCCCccccccccccccceEEEEEECCCCcEEEE
Confidence 44454444 5677899999999999988876 57999999988665443
No 126
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.77 E-value=7.4e-17 Score=122.74 Aligned_cols=163 Identities=8% Similarity=-0.019 Sum_probs=122.6
Q ss_pred cccceeeee----eeecCCCcceeEEEECCCCCCcEEEEEeCCC---cEEEEEcCCcccccceeccceeccCCCeeeEEE
Q psy13207 10 KCLNQWTRR----SNLVDSRTSVTDVKFGPKQLGLVLATCAADG---LVRIYEAPDVMNLSQWCLQHEVACPTLASCLTW 82 (197)
Q Consensus 10 ~~~~~w~~~----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg---~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (197)
+++++|+.. ..+.+|...|.+++|+|+ |+.|++++.|+ .|++||+.+++... .......+.+++|
T Consensus 159 ~~i~i~d~~g~~~~~l~~~~~~v~~~~~Spd--g~~la~~s~~~~~~~i~~~d~~tg~~~~------l~~~~~~~~~~~~ 230 (415)
T 2hqs_A 159 YELRVSDYDGYNQFVVHRSPQPLMSPAWSPD--GSKLAYVTFESGRSALVIQTLANGAVRQ------VASFPRHNGAPAF 230 (415)
T ss_dssp EEEEEEETTSCSCEEEEEESSCEEEEEECTT--SSEEEEEECTTSSCEEEEEETTTCCEEE------EECCSSCEEEEEE
T ss_pred ceEEEEcCCCCCCEEEeCCCCcceeeEEcCC--CCEEEEEEecCCCcEEEEEECCCCcEEE------eecCCCcccCEEE
Confidence 788899864 346788999999999999 99999999885 99999998875321 1112457899999
Q ss_pred ccCCCccc-ce-------eEEEE-----eeEecccCCCceeEEEEcCCCeEEEEeeC-CC--eEEEEEccCCcccceeee
Q psy13207 83 NHSFSRFN-SI-------SIMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCSS-DQ--NIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 83 ~~~~~~~~-~~-------~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~-d~--~i~~~d~~~~~~~~~~~~ 146 (197)
+|+++.++ ++ +++|+ ...+. .|...+.+++|+|+.-.|+.++. ++ .|.+||+.+ .. .
T Consensus 231 spdg~~la~~~~~~g~~~i~~~d~~~~~~~~l~-~~~~~~~~~~~spdg~~l~~~s~~~g~~~i~~~d~~~-----~~-~ 303 (415)
T 2hqs_A 231 SPDGSKLAFALSKTGSLNLYVMDLASGQIRQVT-DGRSNNTEPTWFPDSQNLAFTSDQAGRPQVYKVNING-----GA-P 303 (415)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEETTTCCEEECC-CCSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETTS-----SC-C
T ss_pred cCCCCEEEEEEecCCCceEEEEECCCCCEEeCc-CCCCcccceEECCCCCEEEEEECCCCCcEEEEEECCC-----CC-E
Confidence 99999876 22 67888 45555 68888999999954433366665 45 677778765 22 2
Q ss_pred eeecCceecEEEEEEccCCCEEEEEeCC---CcEEEEEcCCCcc
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIVASSGDD---GCVRLWKLKKKRK 187 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l~~~~~d---g~i~iw~~~~~~~ 187 (197)
..+..+...+.+++|+|+|++|++++.+ ..|.+||+.+++.
T Consensus 304 ~~l~~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~~~~ 347 (415)
T 2hqs_A 304 QRITWEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLATGGV 347 (415)
T ss_dssp EECCCSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTTCCE
T ss_pred EEEecCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCCCCE
Confidence 3344566788999999999999988864 5899999987654
No 127
>2w18_A PALB2, fancn, partner and localizer of BRCA2; fanconi anemia, homologous recomination, polymorphism, phosphoprotein, beta-propeller, WD40, nucleus; 1.90A {Homo sapiens} PDB: 3eu7_A
Probab=99.76 E-value=3.2e-17 Score=120.17 Aligned_cols=129 Identities=7% Similarity=-0.073 Sum_probs=93.3
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccCCCceeEEEEcC--
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDY-- 116 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~-- 116 (197)
++.+++++. .+++|++.+++.+.... ..+...|..++++|+++. +..+. .|...++.++|++
T Consensus 127 ~~~l~s~g~--~~~v~~l~~g~lv~ss~----~g~d~~V~~~~~s~dG~~---------~~s~~-~~~~~v~~l~fs~~~ 190 (356)
T 2w18_A 127 KQVLLKSGN--IKAVLGLTKRRLVSSSG----TLSDQQVEVMTFAEDGGG---------KENQF-LMPPEETILTFAEVQ 190 (356)
T ss_dssp CEEEEEEEE--EEEEEEETTTEEEEEES----SSTTCEEEEEEECTTSCE---------EEEEE-ECCCSSCEEEEEEEE
T ss_pred ccEEEeCCC--eEEEEecCCCcEEEecc----cCCCCcEEEEEECCCCce---------eeeec-cCCCceeeEEeeccC
Confidence 466777664 47789886654332110 113678899999999987 33444 7888898988883
Q ss_pred -CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCce---ecEEEEEEccCCCEE------------EEEeCCCcEEEE
Q psy13207 117 -YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHY---CTVWRVSWNITGTIV------------ASSGDDGCVRLW 180 (197)
Q Consensus 117 -~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~---~~v~~~~~~p~~~~l------------~~~~~dg~i~iw 180 (197)
+.-+|++++.|++|++||+++ ++++..+.+|. ..+.+++|+|+|+++ ++|+.|++|++|
T Consensus 191 g~~~~LaSgS~D~TIkIWDl~T-----Gk~l~tL~g~~~~v~~v~~vafSpdG~~lvs~s~~~~~w~laSGs~D~tIklW 265 (356)
T 2w18_A 191 GMQEALLGTTIMNNIVIWNLKT-----GQLLKKMHIDDSYQASVCHKAYSEMGLLFIVLSHPCAKESESLRSPVFQLIVI 265 (356)
T ss_dssp TSTTEEEEEETTSEEEEEETTT-----CCEEEEEECCC---CCCEEEEEEETTEEEEEEC------------CCEEEEEE
T ss_pred CCCceEEEecCCCcEEEEECCC-----CcEEEEEcCCCcceeeeEEEEECCCCCEEEEeccCCCcceeeccCCCcEEEEE
Confidence 344449999999999999987 67778887654 367788999999876 668899999999
Q ss_pred EcCCCcch
Q psy13207 181 KLKKKRKK 188 (197)
Q Consensus 181 ~~~~~~~~ 188 (197)
|..+++..
T Consensus 266 d~~tgk~l 273 (356)
T 2w18_A 266 NPKTTLSV 273 (356)
T ss_dssp ETTTTEEE
T ss_pred ECCCCEEE
Confidence 99887654
No 128
>3bws_A Protein LP49; two-domain, immunoglobulin-like, 7-bladed beta propeller, unknown function; 1.99A {Leptospira interrogans}
Probab=99.76 E-value=7.8e-17 Score=122.61 Aligned_cols=154 Identities=8% Similarity=0.020 Sum_probs=117.3
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE---
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE--- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--- 97 (197)
..+.+++|+|+ +.++++++.|+.|++||+.+++............+...+.+++|++++..++++ +++|+
T Consensus 123 ~~~~~~~~s~~--~~~~~~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~v~~~~~~~~~~~~~s~~~d~~v~~~d~~~ 200 (433)
T 3bws_A 123 FQPKSVRFIDN--TRLAIPLLEDEGMDVLDINSGQTVRLSPPEKYKKKLGFVETISIPEHNELWVSQMQANAVHVFDLKT 200 (433)
T ss_dssp SCBCCCEESSS--SEEEEEBTTSSSEEEEETTTCCEEEECCCHHHHTTCCEEEEEEEGGGTEEEEEEGGGTEEEEEETTT
T ss_pred CCceEEEEeCC--CeEEEEeCCCCeEEEEECCCCeEeeecCcccccccCCceeEEEEcCCCEEEEEECCCCEEEEEECCC
Confidence 45669999997 999999999999999999887654322211111225678999999999887665 79999
Q ss_pred ---eeEecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEe-
Q psy13207 98 ---AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG- 172 (197)
Q Consensus 98 ---~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~- 172 (197)
+..+. .|...+.+++|+++. .++++++.|+.|++||+++ .+.+..+..+ ..+.+++|+|+++++++++
T Consensus 201 ~~~~~~~~-~~~~~~~~~~~~~~~~~l~~~~~~~~~i~~~d~~~-----~~~~~~~~~~-~~~~~~~~~~~g~~l~~~~~ 273 (433)
T 3bws_A 201 LAYKATVD-LTGKWSKILLYDPIRDLVYCSNWISEDISVIDRKT-----KLEIRKTDKI-GLPRGLLLSKDGKELYIAQF 273 (433)
T ss_dssp CCEEEEEE-CSSSSEEEEEEETTTTEEEEEETTTTEEEEEETTT-----TEEEEECCCC-SEEEEEEECTTSSEEEEEEE
T ss_pred ceEEEEEc-CCCCCeeEEEEcCCCCEEEEEecCCCcEEEEECCC-----CcEEEEecCC-CCceEEEEcCCCCEEEEEEC
Confidence 45555 788899999999433 3235666899999999976 4555555543 4589999999999999988
Q ss_pred -------CCCcEEEEEcCCCcch
Q psy13207 173 -------DDGCVRLWKLKKKRKK 188 (197)
Q Consensus 173 -------~dg~i~iw~~~~~~~~ 188 (197)
.||.|++||+++++..
T Consensus 274 ~~~~~~~~dg~i~~~d~~~~~~~ 296 (433)
T 3bws_A 274 SASNQESGGGRLGIYSMDKEKLI 296 (433)
T ss_dssp ESCTTCSCCEEEEEEETTTTEEE
T ss_pred CCCccccCCCeEEEEECCCCcEE
Confidence 4889999999876543
No 129
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.74 E-value=1.6e-16 Score=114.40 Aligned_cols=166 Identities=8% Similarity=0.018 Sum_probs=119.7
Q ss_pred Ccccccccceeeee----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCC-cccccceeccceeccCCCeee
Q psy13207 5 PLQSEKCLNQWTRR----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPD-VMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 5 ~~~~~~~~~~w~~~----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~-~~~~~~~~~~~~~~~~~~~~~ 79 (197)
....++++++|++. ..+..|...|.+++|+|+ +++|++++ ++.|.+||+.+ ++...... ......+.+
T Consensus 17 ~~~~~~~i~~~d~~~~~~~~~~~~~~~v~~~~~spd--g~~l~~~~-~~~i~~~d~~~~~~~~~~~~----~~~~~~~~~ 89 (297)
T 2ojh_A 17 GGSMRSSIEIFNIRTRKMRVVWQTPELFEAPNWSPD--GKYLLLNS-EGLLYRLSLAGDPSPEKVDT----GFATICNND 89 (297)
T ss_dssp -CCCCEEEEEEETTTTEEEEEEEESSCCEEEEECTT--SSEEEEEE-TTEEEEEESSSCCSCEECCC----TTCCCBCSC
T ss_pred CCCcceeEEEEeCCCCceeeeccCCcceEeeEECCC--CCEEEEEc-CCeEEEEeCCCCCCceEecc----ccccccccc
Confidence 34677889999854 245678899999999999 99999886 78999999988 64332111 111357889
Q ss_pred EEEccCCCcccce-------eEEEE-------eeEecccCCCceeEEEEcCCCeEEE-EeeCCCeEEEEEccCCccccee
Q psy13207 80 LTWNHSFSRFNSI-------SIMYE-------AHSINAEHKDLIHDVAYDYYGLRMA-TCSSDQNIKVTRDVMGTRFDIE 144 (197)
Q Consensus 80 ~~~~~~~~~~~~~-------~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~-s~~~d~~i~~~d~~~~~~~~~~ 144 (197)
++|+|+++.++.+ ..+|. ...+. +...+..++|+++.-.|+ +++.++.+++|+++.. ..
T Consensus 90 ~~~spdg~~l~~~~~~~~~~~~l~~~~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~~l~~~~~~----~~ 163 (297)
T 2ojh_A 90 HGISPDGALYAISDKVEFGKSAIYLLPSTGGTPRLMT--KNLPSYWHGWSPDGKSFTYCGIRDQVFDIYSMDID----SG 163 (297)
T ss_dssp CEECTTSSEEEEEECTTTSSCEEEEEETTCCCCEECC--SSSSEEEEEECTTSSEEEEEEEETTEEEEEEEETT----TC
T ss_pred eEECCCCCEEEEEEeCCCCcceEEEEECCCCceEEee--cCCCccceEECCCCCEEEEEECCCCceEEEEEECC----CC
Confidence 9999999987654 35665 22333 333488899994432224 7888999999997532 22
Q ss_pred eeeeecCceecEEEEEEccCCCEEEEEe-CCCcEEEEEcC
Q psy13207 145 TIGNFEDHYCTVWRVSWNITGTIVASSG-DDGCVRLWKLK 183 (197)
Q Consensus 145 ~~~~~~~h~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~ 183 (197)
....+..+...+.+++|+|+|++|+.++ .++.+.+|+++
T Consensus 164 ~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~ 203 (297)
T 2ojh_A 164 VETRLTHGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVR 203 (297)
T ss_dssp CEEECCCSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred cceEcccCCCccccceECCCCCEEEEEecCCCCccEEEEC
Confidence 3445566778899999999999888766 58999999986
No 130
>2oit_A Nucleoporin 214KDA; NH2 terminal domain of NUP214/CAN, X-RAY crystallography, beta-propeller, structure, mRNA export, NPC assembly, leukemia; HET: MES; 1.65A {Homo sapiens} PDB: 3fmo_A* 3fmp_A* 3fhc_A
Probab=99.73 E-value=1.8e-16 Score=121.33 Aligned_cols=134 Identities=20% Similarity=0.242 Sum_probs=99.2
Q ss_pred cccccccceeeee----------------eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccc
Q psy13207 6 LQSEKCLNQWTRR----------------SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQH 69 (197)
Q Consensus 6 ~~~~~~~~~w~~~----------------~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~ 69 (197)
+..|+.+++|++. ..+.+|...|.+++|+|+. +.+|++++.||+|++||+++.....
T Consensus 114 gs~d~~v~iwd~~~~~~~~~~~~~~~~~~~~~~~h~~~V~~v~~~p~~-~~~las~s~Dg~v~iwD~~~~~~~~------ 186 (434)
T 2oit_A 114 SEYGSIIAFFDVRTFSNEAKQQKRPFAYHKLLKDAGGMVIDMKWNPTV-PSMVAVCLADGSIAVLQVTETVKVC------ 186 (434)
T ss_dssp TTTEEEEEEEEHHHHHCTTCSSCCCSEEEECCCSGGGSEEEEEECSSC-TTEEEEEETTSCEEEEEESSSEEEE------
T ss_pred cCCCceEEEEEccccccCCcCCcceeeeeeccCCCCCceEEEEECCCC-CCEEEEEECCCeEEEEEcCCCccee------
Confidence 4568899999753 2356799999999999963 6889999999999999998763210
Q ss_pred eeccCCCeeeEEEccCCCcccceeEEEEeeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeee
Q psy13207 70 EVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIG 147 (197)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 147 (197)
... +|...|.+++|+ ++.+ ++|+.|+.|++||.+. ....
T Consensus 187 ------------------------------~~~-~~~~~v~~v~wspdg~~l--asgs~dg~v~iwd~~~------~~~~ 227 (434)
T 2oit_A 187 ------------------------------ATL-PSTVAVTSVCWSPKGKQL--AVGKQNGTVVQYLPTL------QEKK 227 (434)
T ss_dssp ------------------------------EEE-CGGGCEEEEEECTTSSCE--EEEETTSCEEEECTTC------CEEE
T ss_pred ------------------------------ecc-CCCCceeEEEEcCCCCEE--EEEcCCCcEEEEccCC------cccc
Confidence 111 577788888998 4555 9999999999999872 1122
Q ss_pred eec-------CceecEEEEEEccCCCEEEEEe-CCCc------EEEEEcCCC
Q psy13207 148 NFE-------DHYCTVWRVSWNITGTIVASSG-DDGC------VRLWKLKKK 185 (197)
Q Consensus 148 ~~~-------~h~~~v~~~~~~p~~~~l~~~~-~dg~------i~iw~~~~~ 185 (197)
.+. .|...|.+++|++++.++++.+ .||. +++|++++.
T Consensus 228 ~~~~~~~~~~~~~~~v~~v~w~~~~~~l~~~~~~dg~~~~~~~v~i~~l~~~ 279 (434)
T 2oit_A 228 VIPCPPFYESDHPVRVLDVLWIGTYVFAIVYAAADGTLETSPDVVMALLPKK 279 (434)
T ss_dssp EECCCTTCCTTSCEEEEEEEEEETTEEEEEEEETTCCSSSCCEEEEEECCCT
T ss_pred cccCCcccCCCCceeEEEEEEecCceEEEEEccCCCccCCCCceEEEEeccC
Confidence 222 2345899999999988775533 4433 899999865
No 131
>2hqs_A Protein TOLB; TOLB, PAL, TOL, transport protein-lipoprotein complex; 1.50A {Escherichia coli} SCOP: b.68.4.1 c.51.2.1 PDB: 3iax_A 1c5k_A 2ivz_A 2w8b_B 2w8b_A 1crz_A
Probab=99.71 E-value=9.6e-16 Score=116.62 Aligned_cols=160 Identities=16% Similarity=0.080 Sum_probs=115.4
Q ss_pred cccceeeee----eeecCCCcceeEEEECCCCCCcEEE-EEeCCCc--EEEEEcCCcccccceeccceeccCCCeeeEEE
Q psy13207 10 KCLNQWTRR----SNLVDSRTSVTDVKFGPKQLGLVLA-TCAADGL--VRIYEAPDVMNLSQWCLQHEVACPTLASCLTW 82 (197)
Q Consensus 10 ~~~~~w~~~----~~~~~h~~~v~~~~~~~~~~~~~l~-s~~~dg~--v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 82 (197)
..+++|++. ..+..|...+.+++|+|+ |+.|+ +++.|+. |++||+.+++.. .+ ......+.+++|
T Consensus 203 ~~i~~~d~~tg~~~~l~~~~~~~~~~~~spd--g~~la~~~~~~g~~~i~~~d~~~~~~~-~l-----~~~~~~~~~~~~ 274 (415)
T 2hqs_A 203 SALVIQTLANGAVRQVASFPRHNGAPAFSPD--GSKLAFALSKTGSLNLYVMDLASGQIR-QV-----TDGRSNNTEPTW 274 (415)
T ss_dssp CEEEEEETTTCCEEEEECCSSCEEEEEECTT--SSEEEEEECTTSSCEEEEEETTTCCEE-EC-----CCCSSCEEEEEE
T ss_pred cEEEEEECCCCcEEEeecCCCcccCEEEcCC--CCEEEEEEecCCCceEEEEECCCCCEE-eC-----cCCCCcccceEE
Confidence 477888764 246678889999999999 88777 7776665 999999876431 11 112457899999
Q ss_pred ccCCCcccce--------eEEEE-----eeEecccCCCceeEEEEcCCCeEEEEeeCC---CeEEEEEccCCcccceeee
Q psy13207 83 NHSFSRFNSI--------SIMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCSSD---QNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 83 ~~~~~~~~~~--------~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d---~~i~~~d~~~~~~~~~~~~ 146 (197)
+|+++.++.+ +.+|+ ...+. .+...+..++|+++.-+|+.++.+ ..|.+||+.+ .+.
T Consensus 275 spdg~~l~~~s~~~g~~~i~~~d~~~~~~~~l~-~~~~~~~~~~~spdG~~l~~~~~~~g~~~i~~~d~~~-----~~~- 347 (415)
T 2hqs_A 275 FPDSQNLAFTSDQAGRPQVYKVNINGGAPQRIT-WEGSQNQDADVSSDGKFMVMVSSNGGQQHIAKQDLAT-----GGV- 347 (415)
T ss_dssp CTTSSEEEEEECTTSSCEEEEEETTSSCCEECC-CSSSEEEEEEECTTSSEEEEEEECSSCEEEEEEETTT-----CCE-
T ss_pred CCCCCEEEEEECCCCCcEEEEEECCCCCEEEEe-cCCCcccCeEECCCCCEEEEEECcCCceEEEEEECCC-----CCE-
Confidence 9999987543 45556 33444 567788999999444333666654 5899999976 332
Q ss_pred eeecCceecEEEEEEccCCCEEEEEeCCC---cEEEEEcCCC
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIVASSGDDG---CVRLWKLKKK 185 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l~~~~~dg---~i~iw~~~~~ 185 (197)
..+..+. .+.+++|+|+|++|++++.++ .|++||+...
T Consensus 348 ~~l~~~~-~~~~~~~spdg~~l~~~s~~~~~~~l~~~d~~g~ 388 (415)
T 2hqs_A 348 QVLSSTF-LDETPSLAPNGTMVIYSSSQGMGSVLNLVSTDGR 388 (415)
T ss_dssp EECCCSS-SCEEEEECTTSSEEEEEEEETTEEEEEEEETTSC
T ss_pred EEecCCC-CcCCeEEcCCCCEEEEEEcCCCccEEEEEECCCC
Confidence 3344454 789999999999999998877 7999998743
No 132
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.64 E-value=2.3e-14 Score=112.55 Aligned_cols=170 Identities=7% Similarity=0.029 Sum_probs=121.3
Q ss_pred ccccccceeeee-----eeec-CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEc--CCcccccceeccceeccCCCee
Q psy13207 7 QSEKCLNQWTRR-----SNLV-DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEA--PDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~-~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~--~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
..++++.+|+.. .++. ++. +.+++|+|+ |++|++++.|++|++||+ .+.+.+. .+.......
T Consensus 156 ~~d~~V~v~D~~t~~~~~~i~~g~~--~~~v~~spd--g~~l~v~~~d~~V~v~D~~~~t~~~~~------~i~~g~~p~ 225 (543)
T 1nir_A 156 RDAGQIALVDGDSKKIVKVIDTGYA--VHISRMSAS--GRYLLVIGRDARIDMIDLWAKEPTKVA------EIKIGIEAR 225 (543)
T ss_dssp GGGTEEEEEETTTCCEEEEEECSTT--EEEEEECTT--SCEEEEEETTSEEEEEETTSSSCEEEE------EEECCSEEE
T ss_pred cCCCeEEEEECCCceEEEEEecCcc--cceEEECCC--CCEEEEECCCCeEEEEECcCCCCcEEE------EEecCCCcc
Confidence 345678888643 3455 443 889999999 999999999999999999 6654332 333355679
Q ss_pred eEEEcc----CCCcccce------eEEEE------eeEeccc----------C-CCceeEEEEcC-CCeEEEEeeCCCeE
Q psy13207 79 CLTWNH----SFSRFNSI------SIMYE------AHSINAE----------H-KDLIHDVAYDY-YGLRMATCSSDQNI 130 (197)
Q Consensus 79 ~~~~~~----~~~~~~~~------~~~~~------~~~~~~~----------~-~~~i~~~~~~~-~~~~~~s~~~d~~i 130 (197)
.++|+| ++++++++ +.+|| +..+. . | ...+..+.+++ ...++++...++.|
T Consensus 226 ~va~sp~~~~dg~~l~v~~~~~~~v~v~D~~t~~~~~~i~-~~g~~~~~~~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i 304 (543)
T 1nir_A 226 SVESSKFKGYEDRYTIAGAYWPPQFAIMDGETLEPKQIVS-TRGMTVDTQTYHPEPRVAAIIASHEHPEFIVNVKETGKV 304 (543)
T ss_dssp EEEECCSTTCTTTEEEEEEEESSEEEEEETTTCCEEEEEE-CCEECSSSCCEESCCCEEEEEECSSSSEEEEEETTTTEE
T ss_pred eEEeCCCcCCCCCEEEEEEccCCeEEEEeccccccceeec-ccCcccCccccccCCceEEEEECCCCCEEEEEECCCCeE
Confidence 999999 99987654 68898 33333 2 2 23688899983 33444788889999
Q ss_pred EEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEe-CCCcEEEEEcCCCcchhhh
Q psy13207 131 KVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG-DDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~~~~~~~~~ 191 (197)
.+||..+.... .+..+ .+...+.++.|+|+|++|++++ .+++|.+||..+++....+
T Consensus 305 ~vvd~~~~~~l---~~~~i-~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D~~tg~l~~~i 362 (543)
T 1nir_A 305 LLVNYKDIDNL---TVTSI-GAAPFLHDGGWDSSHRYFMTAANNSNKVAVIDSKDRRLSALV 362 (543)
T ss_dssp EEEECTTSSSC---EEEEE-ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEETTTTEEEEEE
T ss_pred EEEEecCCCcc---eeEEe-ccCcCccCceECCCCCEEEEEecCCCeEEEEECCCCeEEEee
Confidence 99999763211 11122 2455678899999999876655 6899999999987765544
No 133
>2ojh_A Uncharacterized protein ATU1656/AGR_C_3050; TOLB, 6-stranded beta-propeller, structural genomics, PSI-2; 1.85A {Agrobacterium tumefaciens str}
Probab=99.62 E-value=5e-14 Score=101.21 Aligned_cols=167 Identities=14% Similarity=0.085 Sum_probs=115.2
Q ss_pred ccccceeeeee-e-----ecCC-CcceeEEEECCCCCCcEEEEEe--CCCcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 9 EKCLNQWTRRS-N-----LVDS-RTSVTDVKFGPKQLGLVLATCA--ADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 9 ~~~~~~w~~~~-~-----~~~h-~~~v~~~~~~~~~~~~~l~s~~--~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
++.+.+|++.. . +..| ...+.+++|+|+ +++|++++ .++...||.+...... ...+.....+..
T Consensus 61 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd--g~~l~~~~~~~~~~~~l~~~~~~~~~-----~~~~~~~~~~~~ 133 (297)
T 2ojh_A 61 EGLLYRLSLAGDPSPEKVDTGFATICNNDHGISPD--GALYAISDKVEFGKSAIYLLPSTGGT-----PRLMTKNLPSYW 133 (297)
T ss_dssp TTEEEEEESSSCCSCEECCCTTCCCBCSCCEECTT--SSEEEEEECTTTSSCEEEEEETTCCC-----CEECCSSSSEEE
T ss_pred CCeEEEEeCCCCCCceEeccccccccccceEECCC--CCEEEEEEeCCCCcceEEEEECCCCc-----eEEeecCCCccc
Confidence 45677777654 1 2344 467899999999 99999988 4456666665422111 112222345888
Q ss_pred EEEccCCCcccc-e-----eEEEE-------eeEecccCCCceeEEEEcCCCeEEEEee-CCCeEEEEEccCCcccceee
Q psy13207 80 LTWNHSFSRFNS-I-----SIMYE-------AHSINAEHKDLIHDVAYDYYGLRMATCS-SDQNIKVTRDVMGTRFDIET 145 (197)
Q Consensus 80 ~~~~~~~~~~~~-~-----~~~~~-------~~~~~~~~~~~i~~~~~~~~~~~~~s~~-~d~~i~~~d~~~~~~~~~~~ 145 (197)
++|+|+++.++. + +.+|+ ...+. .+...+.+++|+++.-.++.++ .++.+++|+++.. ...
T Consensus 134 ~~~spdg~~l~~~~~~~~~~~l~~~~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~~~~i~~~~~~----~~~ 208 (297)
T 2ojh_A 134 HGWSPDGKSFTYCGIRDQVFDIYSMDIDSGVETRLT-HGEGRNDGPDYSPDGRWIYFNSSRTGQMQIWRVRVD----GSS 208 (297)
T ss_dssp EEECTTSSEEEEEEEETTEEEEEEEETTTCCEEECC-CSSSCEEEEEECTTSSEEEEEECTTSSCEEEEEETT----SSC
T ss_pred eEECCCCCEEEEEECCCCceEEEEEECCCCcceEcc-cCCCccccceECCCCCEEEEEecCCCCccEEEECCC----CCC
Confidence 999999998763 2 47777 33444 5778899999994432225544 6899999998631 344
Q ss_pred eeeecCceecEEEEEEccCCCEEEEEeCC-----------CcEEEEEcCCCcc
Q psy13207 146 IGNFEDHYCTVWRVSWNITGTIVASSGDD-----------GCVRLWKLKKKRK 187 (197)
Q Consensus 146 ~~~~~~h~~~v~~~~~~p~~~~l~~~~~d-----------g~i~iw~~~~~~~ 187 (197)
...+..|...+.+++|+|+|++|+.++.+ +.|.+||+.+++.
T Consensus 209 ~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~ 261 (297)
T 2ojh_A 209 VERITDSAYGDWFPHPSPSGDKVVFVSYDADVFDHPRDLDVRVQLMDMDGGNV 261 (297)
T ss_dssp EEECCCCSEEEEEEEECTTSSEEEEEEEETTCCSCCSSEEEEEEEEETTSCSC
T ss_pred cEEEecCCcccCCeEECCCCCEEEEEEcCCCCCcccccCceEEEEEecCCCCc
Confidence 56667778889999999999999988876 5699999987643
No 134
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.60 E-value=3.3e-14 Score=114.80 Aligned_cols=172 Identities=9% Similarity=0.016 Sum_probs=115.0
Q ss_pred ccccccceeeeee-----eecCCCc---ceeEEEECCCCCCcEEEEEeCC---------CcEEEEEcCCcccccceeccc
Q psy13207 7 QSEKCLNQWTRRS-----NLVDSRT---SVTDVKFGPKQLGLVLATCAAD---------GLVRIYEAPDVMNLSQWCLQH 69 (197)
Q Consensus 7 ~~~~~~~~w~~~~-----~~~~h~~---~v~~~~~~~~~~~~~l~s~~~d---------g~v~iw~~~~~~~~~~~~~~~ 69 (197)
..++++++|+... .+..|.. .|.+++|+|+ |++|++++.+ +.+.+||+.+++. ..+. .
T Consensus 34 ~~dg~i~~~d~~~g~~~~~~~~~~~~~~~v~~~~~SpD--g~~l~~~~~~~~~~~~~~~~~i~~~d~~~~~~-~~l~--~ 108 (723)
T 1xfd_A 34 EQKGTVRLWNVETNTSTVLIEGKKIESLRAIRYEISPD--REYALFSYNVEPIYQHSYTGYYVLSKIPHGDP-QSLD--P 108 (723)
T ss_dssp CSSSCEEEBCGGGCCCEEEECTTTTTTTTCSEEEECTT--SSEEEEEESCCCCSSSCCCSEEEEEESSSCCC-EECC--C
T ss_pred eCCCCEEEEECCCCcEEEEeccccccccccceEEECCC--CCEEEEEecCccceeecceeeEEEEECCCCce-Eecc--C
Confidence 3567889997642 3555554 4999999999 9999998764 7888999988753 1111 1
Q ss_pred eeccCCCeeeEEEccCCCcccce----eEEEE-----eeEecccCCCc------------------eeEEEEcCCCeEEE
Q psy13207 70 EVACPTLASCLTWNHSFSRFNSI----SIMYE-----AHSINAEHKDL------------------IHDVAYDYYGLRMA 122 (197)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~~~~~~~~------------------i~~~~~~~~~~~~~ 122 (197)
.......+..++|+|+|+.++.. +++|+ ...+...+... +.+++|+|+.-.|+
T Consensus 109 ~~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~g~~~~~~~~~~~~~~~~g~~~~v~~ee~~~~~~~~~~SpDg~~la 188 (723)
T 1xfd_A 109 PEVSNAKLQYAGWGPKGQQLIFIFENNIYYCAHVGKQAIRVVSTGKEGVIYNGLSDWLYEEEILKTHIAHWWSPDGTRLA 188 (723)
T ss_dssp TTCCSCCCSBCCBCSSTTCEEEEETTEEEEESSSSSCCEEEECCCBTTTEEEEECCHHHHHTTSSSSEEEEECTTSSEEE
T ss_pred CccccccccccEECCCCCEEEEEECCeEEEEECCCCceEEEecCCCCCceECcccceeEEEEeccCcceEEECCCCCEEE
Confidence 00113347899999999998754 78887 22222122322 27899995443336
Q ss_pred EeeCCC----------------------------------eEEEEEccCCcccceeeeeeecC------ceecEEEEEEc
Q psy13207 123 TCSSDQ----------------------------------NIKVTRDVMGTRFDIETIGNFED------HYCTVWRVSWN 162 (197)
Q Consensus 123 s~~~d~----------------------------------~i~~~d~~~~~~~~~~~~~~~~~------h~~~v~~~~~~ 162 (197)
.++.|+ .|++||+.+ ......+.. +...+..++|+
T Consensus 189 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~G~~~~~~~l~~~d~~~-----~~~~~~l~~~~~~~~~~~~~~~~~~S 263 (723)
T 1xfd_A 189 YAAINDSRVPIMELPTYTGSIYPTVKPYHYPKAGSENPSISLHVIGLNG-----PTHDLEMMPPDDPRMREYYITMVKWA 263 (723)
T ss_dssp EEEEECTTSCEEEECCCSSSSSCCCEEEECCBTTSCCCEEEEEEEESSS-----SCCCEECCCCCCGGGSSEEEEEEEES
T ss_pred EEEECCCccceEEeeccCCcCCCcceeccCCCCCCCCCeeEEEEEECCC-----CceeEEeeCCccCCCccceeEEEEEe
Confidence 665442 788999876 232233333 36788999999
Q ss_pred cCCCEEEEEeC----CCcEEEEEcCCCcch
Q psy13207 163 ITGTIVASSGD----DGCVRLWKLKKKRKK 188 (197)
Q Consensus 163 p~~~~l~~~~~----dg~i~iw~~~~~~~~ 188 (197)
|||+++++.+. +..|++||+.+++..
T Consensus 264 pDg~~l~~~~~~~~~~~~i~~~d~~~g~~~ 293 (723)
T 1xfd_A 264 TSTKVAVTWLNRAQNVSILTLCDATTGVCT 293 (723)
T ss_dssp SSSEEEEEEEETTSCEEEEEEEETTTCCEE
T ss_pred CCCeEEEEEEcCCCCeEEEEEEeCCCCcce
Confidence 99998877653 357999999876643
No 135
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.60 E-value=3.9e-13 Score=98.79 Aligned_cols=170 Identities=12% Similarity=0.070 Sum_probs=113.7
Q ss_pred ccccccceeeee--e-----eecCCCcceeEEEECCCCCCcEEEEEeCC-CcEEEEEcC--CcccccceeccceeccCCC
Q psy13207 7 QSEKCLNQWTRR--S-----NLVDSRTSVTDVKFGPKQLGLVLATCAAD-GLVRIYEAP--DVMNLSQWCLQHEVACPTL 76 (197)
Q Consensus 7 ~~~~~~~~w~~~--~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~~d-g~v~iw~~~--~~~~~~~~~~~~~~~~~~~ 76 (197)
..++.+++|++. . ....|...+.+++|+|+ +++|++++.+ +.|.+|++. +++. .....+.....
T Consensus 12 ~~~~~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~spd--g~~l~~~~~~~~~v~~~~~~~~~~~~----~~~~~~~~~~~ 85 (343)
T 1ri6_A 12 PESQQIHVWNLNHEGALTLTQVVDVPGQVQPMVVSPD--KRYLYVGVRPEFRVLAYRIAPDDGAL----TFAAESALPGS 85 (343)
T ss_dssp GGGTEEEEEEECTTSCEEEEEEEECSSCCCCEEECTT--SSEEEEEETTTTEEEEEEECTTTCCE----EEEEEEECSSC
T ss_pred CCCCeEEEEEECCCCcEEEeeeEecCCCCceEEECCC--CCEEEEeecCCCeEEEEEecCCCCce----eeccccccCCC
Confidence 457888999773 1 12346778999999999 9888888876 999999997 3321 11222232347
Q ss_pred eeeEEEccCCCcccce------eEEEEe---eEec----ccCCCceeEEEEcCCCeEEEEee-CCCeEEEEEccCCcccc
Q psy13207 77 ASCLTWNHSFSRFNSI------SIMYEA---HSIN----AEHKDLIHDVAYDYYGLRMATCS-SDQNIKVTRDVMGTRFD 142 (197)
Q Consensus 77 ~~~~~~~~~~~~~~~~------~~~~~~---~~~~----~~~~~~i~~~~~~~~~~~~~s~~-~d~~i~~~d~~~~~~~~ 142 (197)
+..++|+|++++++.+ +.+|++ .... ......+.+++|+++.-.+++++ .++.|.+||+.+...
T Consensus 86 ~~~~~~s~dg~~l~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~-- 163 (343)
T 1ri6_A 86 LTHISTDHQGQFVFVGSYNAGNVSVTRLEDGLPVGVVDVVEGLDGCHSANISPDNRTLWVPALKQDRICLFTVSDDGH-- 163 (343)
T ss_dssp CSEEEECTTSSEEEEEETTTTEEEEEEEETTEEEEEEEEECCCTTBCCCEECTTSSEEEEEEGGGTEEEEEEECTTSC--
T ss_pred CcEEEEcCCCCEEEEEecCCCeEEEEECCCCccccccccccCCCCceEEEECCCCCEEEEecCCCCEEEEEEecCCCc--
Confidence 8899999999976433 788885 2111 02334688899994432225555 899999999975111
Q ss_pred eeeee--eecC-ceecEEEEEEccCCCEEEEEe-CCCcEEEEEcCC
Q psy13207 143 IETIG--NFED-HYCTVWRVSWNITGTIVASSG-DDGCVRLWKLKK 184 (197)
Q Consensus 143 ~~~~~--~~~~-h~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~~ 184 (197)
..... .+.. ....+.+++|+|++++++.++ .++.|.+|+++.
T Consensus 164 ~~~~~~~~~~~~~~~~~~~~~~~pdg~~l~~~~~~~~~i~~~~~~~ 209 (343)
T 1ri6_A 164 LVAQDPAEVTTVEGAGPRHMVFHPNEQYAYCVNELNSSVDVWELKD 209 (343)
T ss_dssp EEEEEEEEEECSTTCCEEEEEECTTSSEEEEEETTTTEEEEEESSC
T ss_pred eeeecccccccCCCCCcceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 11111 2222 234678899999999776555 889999999964
No 136
>1ri6_A Putative isomerase YBHE; 7-bladed propeller, enzyme, PSI, protein structure initiative, NEW YORK SGX research center for structural genomics; 2.00A {Escherichia coli} SCOP: b.69.11.1
Probab=99.57 E-value=4.2e-13 Score=98.63 Aligned_cols=170 Identities=8% Similarity=0.006 Sum_probs=110.0
Q ss_pred ccccceeee---ee-----eecCCCcceeEEEECCCCCCcEEEEEe-CCCcEEEEEcCC-cccccceeccceeccCCCee
Q psy13207 9 EKCLNQWTR---RS-----NLVDSRTSVTDVKFGPKQLGLVLATCA-ADGLVRIYEAPD-VMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 9 ~~~~~~w~~---~~-----~~~~h~~~v~~~~~~~~~~~~~l~s~~-~dg~v~iw~~~~-~~~~~~~~~~~~~~~~~~~~ 78 (197)
++.+.+|++ .. .+. ....+.++.|+|+ ++++++++ .++.|.+||+.+ ++................+.
T Consensus 105 ~~~i~~~d~~~~~~~~~~~~~~-~~~~~~~~~~s~d--g~~l~~~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 181 (343)
T 1ri6_A 105 AGNVSVTRLEDGLPVGVVDVVE-GLDGCHSANISPD--NRTLWVPALKQDRICLFTVSDDGHLVAQDPAEVTTVEGAGPR 181 (343)
T ss_dssp TTEEEEEEEETTEEEEEEEEEC-CCTTBCCCEECTT--SSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEEECSTTCCEE
T ss_pred CCeEEEEECCCCcccccccccc-CCCCceEEEECCC--CCEEEEecCCCCEEEEEEecCCCceeeecccccccCCCCCcc
Confidence 567888887 31 122 3346899999998 88777776 899999999986 33211000011112245678
Q ss_pred eEEEccCCCcccce------eEEEEeeE----------e---cccC--CCceeEEEEcCCC-eEEEEeeCCCeEEEEEcc
Q psy13207 79 CLTWNHSFSRFNSI------SIMYEAHS----------I---NAEH--KDLIHDVAYDYYG-LRMATCSSDQNIKVTRDV 136 (197)
Q Consensus 79 ~~~~~~~~~~~~~~------~~~~~~~~----------~---~~~~--~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~ 136 (197)
.++|+|++++++.+ +.+|++.. + ...+ ...+..++|+++. .+++++..++.|.+||+.
T Consensus 182 ~~~~~pdg~~l~~~~~~~~~i~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~i~~s~dg~~l~v~~~~~~~i~v~d~~ 261 (343)
T 1ri6_A 182 HMVFHPNEQYAYCVNELNSSVDVWELKDPHGNIECVQTLDMMPENFSDTRWAADIHITPDGRHLYACDRTASLITVFSVS 261 (343)
T ss_dssp EEEECTTSSEEEEEETTTTEEEEEESSCTTSCCEEEEEEECSCTTCCSCCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred eEEECCCCCEEEEEeCCCCEEEEEEecCCCCcEEEEeeccccCccccccCCccceEECCCCCEEEEEecCCCEEEEEEEc
Confidence 89999999976332 78888311 1 1011 2345679999443 323466689999999997
Q ss_pred CCcccceeeeeeecCceecEEEEEEccCCCEEEEEe-CCCcEEEEEcC
Q psy13207 137 MGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG-DDGCVRLWKLK 183 (197)
Q Consensus 137 ~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~ 183 (197)
... .....+..+..+.. +.+++|+|+|++|++++ .++.|.+|+++
T Consensus 262 ~~~-~~~~~~~~~~~~~~-~~~~~~s~dg~~l~~~~~~~~~v~v~~~d 307 (343)
T 1ri6_A 262 EDG-SVLSKEGFQPTETQ-PRGFNVDHSGKYLIAAGQKSHHISVYEIV 307 (343)
T ss_dssp TTS-CCEEEEEEEECSSS-CCCEEECTTSSEEEEECTTTCEEEEEEEE
T ss_pred CCC-CceEEeeeecCCCc-cceEEECCCCCEEEEecCCCCeEEEEEEc
Confidence 311 11344444444433 78899999999888887 68999999664
No 137
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.53 E-value=3.8e-12 Score=94.15 Aligned_cols=151 Identities=9% Similarity=-0.014 Sum_probs=101.4
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce------eEEEEee-
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------SIMYEAH- 99 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~- 99 (197)
.+.++.|+|+ |+++++...++.|.+|++.....+.... ............++|+|++++++.+ +.+|++.
T Consensus 142 ~~~~~~~spd--g~l~v~~~~~~~v~~~~~~~~g~~~~~~-~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 142 HIHYTDLTPD--NRLAVIDLGSDKVYVYNVSDAGQLSEQS-VLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp CEEEEEECTT--SCEEEEETTTTEEEEEEECTTSCEEEEE-EEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred CceEEEECCC--CcEEEEeCCCCEEEEEEECCCCcEEEee-eEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 4888999999 8877777788999999998322211111 0111124467789999999965442 6788722
Q ss_pred ---------EecccCC------CceeEEEEcCCCe-EEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEcc
Q psy13207 100 ---------SINAEHK------DLIHDVAYDYYGL-RMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNI 163 (197)
Q Consensus 100 ---------~~~~~~~------~~i~~~~~~~~~~-~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p 163 (197)
.+. ... ..+..++|+++.- ++++...++.|.+|++... -....+..+..+...+..++|+|
T Consensus 219 ~~g~~~~~~~~~-~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~~--g~~~~~~~~~~~~~~~~~~~~sp 295 (347)
T 3hfq_A 219 QTGAFTQLGIVK-TIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTAD--GHLTLIQQISTEGDFPRDFDLDP 295 (347)
T ss_dssp TTTEEEEEEEEE-SSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECGG--GCEEEEEEEECSSSCCCEEEECT
T ss_pred CCCceEEeeeee-ecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECCC--CcEEEeEEEecCCCCcCeEEECC
Confidence 122 111 3578899995443 2356667899999998631 01345555555566678999999
Q ss_pred CCCEEEEEeC-CCcEEEEEcC
Q psy13207 164 TGTIVASSGD-DGCVRLWKLK 183 (197)
Q Consensus 164 ~~~~l~~~~~-dg~i~iw~~~ 183 (197)
+|++|++++. ++.|.+|+++
T Consensus 296 dg~~l~v~~~~~~~v~v~~~d 316 (347)
T 3hfq_A 296 TEAFVVVVNQNTDNATLYARD 316 (347)
T ss_dssp TSSEEEEEETTTTEEEEEEEC
T ss_pred CCCEEEEEEcCCCcEEEEEEe
Confidence 9998888875 4899999654
No 138
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.53 E-value=3.6e-13 Score=109.08 Aligned_cols=142 Identities=13% Similarity=0.056 Sum_probs=98.6
Q ss_pred CcceeEEEECCCCCCcEEEEEeC-CC-----cEEEEEcCCcccccceecccee-------------------ccCCCeee
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAA-DG-----LVRIYEAPDVMNLSQWCLQHEV-------------------ACPTLASC 79 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~-dg-----~v~iw~~~~~~~~~~~~~~~~~-------------------~~~~~~~~ 79 (197)
...+.+++|+|+ |++|++++. |+ .|++||+.+++........... .+...+.+
T Consensus 36 ~~~~~~~~~Spd--G~~la~~~~~d~~~~~~~i~~~d~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~ 113 (741)
T 2ecf_A 36 GPTLMKPKVAPD--GSRVTFLRGKDSDRNQLDLWSYDIGSGQTRLLVDSKVVLPGTETLSDEEKARRERQRIAAMTGIVD 113 (741)
T ss_dssp CCCCEEEEECTT--SSEEEEEECCSSCTTEEEEEEEETTTCCEEEEECGGGTC--------------------CCEESCC
T ss_pred CCCCCCceEecC--CCEEEEEeccCCCCcccEEEEEECCCCceeEccchhhcccccccccchhhhhhhhhhhccccCcce
Confidence 457999999999 999999998 88 9999999887643322211000 00023789
Q ss_pred EEEccCCCcccce----eEEEEeeE--------ecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeee
Q psy13207 80 LTWNHSFSRFNSI----SIMYEAHS--------INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIG 147 (197)
Q Consensus 80 ~~~~~~~~~~~~~----~~~~~~~~--------~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~ 147 (197)
++|+|++++++.+ +.+|++.. +. .|...+..++|+|+.-+|+.++ ++.|++||+.+ .....
T Consensus 114 ~~~SpDg~~l~~~~~~~i~~~d~~~~~~~~~~~l~-~~~~~~~~~~~SPDG~~la~~~-~~~i~~~d~~~-----g~~~~ 186 (741)
T 2ecf_A 114 YQWSPDAQRLLFPLGGELYLYDLKQEGKAAVRQLT-HGEGFATDAKLSPKGGFVSFIR-GRNLWVIDLAS-----GRQMQ 186 (741)
T ss_dssp CEECTTSSEEEEEETTEEEEEESSSCSTTSCCBCC-CSSSCEEEEEECTTSSEEEEEE-TTEEEEEETTT-----TEEEE
T ss_pred eEECCCCCEEEEEeCCcEEEEECCCCCcceEEEcc-cCCcccccccCCCCCCEEEEEe-CCcEEEEecCC-----CCEEE
Confidence 9999999988754 78898332 22 4667899999995443337665 56899999976 33332
Q ss_pred eecCceec----------------EEEEEEccCCCEEEEEeCCC
Q psy13207 148 NFEDHYCT----------------VWRVSWNITGTIVASSGDDG 175 (197)
Q Consensus 148 ~~~~h~~~----------------v~~~~~~p~~~~l~~~~~dg 175 (197)
....+... +..++|+|||++|++++.|+
T Consensus 187 ~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~ 230 (741)
T 2ecf_A 187 LTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDE 230 (741)
T ss_dssp CCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEEC
T ss_pred eccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcC
Confidence 22222221 47799999999999998776
No 139
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.52 E-value=7.8e-13 Score=96.93 Aligned_cols=150 Identities=15% Similarity=0.149 Sum_probs=103.9
Q ss_pred ceeEEEECCCCCCcEEEEEe------------CCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce--
Q psy13207 27 SVTDVKFGPKQLGLVLATCA------------ADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-- 92 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~------------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 92 (197)
.+.++.|+|+ |++|++++ .++.|.+||+.+++....+ .....+.+++|+|++++++.+
T Consensus 83 ~~~~~~~s~d--g~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~~~~~~~~------~~~~~~~~~~~s~dg~~l~~~~~ 154 (337)
T 1pby_B 83 SLFGAALSPD--GKTLAIYESPVRLELTHFEVQPTRVALYDAETLSRRKAF------EAPRQITMLAWARDGSKLYGLGR 154 (337)
T ss_dssp CTTCEEECTT--SSEEEEEEEEEEECSSCEEECCCEEEEEETTTTEEEEEE------ECCSSCCCEEECTTSSCEEEESS
T ss_pred cccceEECCC--CCEEEEEecccccccccccccCceEEEEECCCCcEEEEE------eCCCCcceeEECCCCCEEEEeCC
Confidence 6788999998 88888876 5799999999876543322 224457788899999876543
Q ss_pred -eEEEE------eeEecc--------------------------------------------------------------
Q psy13207 93 -SIMYE------AHSINA-------------------------------------------------------------- 103 (197)
Q Consensus 93 -~~~~~------~~~~~~-------------------------------------------------------------- 103 (197)
+.+|+ +..+..
T Consensus 155 ~i~~~d~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~d~~~~~~~~~ 234 (337)
T 1pby_B 155 DLHVMDPEAGTLVEDKPIQSWEAETYAQPDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMR 234 (337)
T ss_dssp SEEEEETTTTEEEEEECSTTTTTTTBCCCBCCCCCCCCTTTTEEEEEEEEEBTTSCTTSGGGEEEEEEEEETTTCCEEEE
T ss_pred eEEEEECCCCcEeeeeeccccCCCceeCCCccEEeeeccCCCceeeeeeccccccccccccccccceEEEeCCCCCceEe
Confidence 67777 111110
Q ss_pred ---cCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEE
Q psy13207 104 ---EHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180 (197)
Q Consensus 104 ---~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw 180 (197)
.+...+.+++|+++.-+++++ ++.|.+||+.+ .+.+..+.. ...+.+++|+|+|++|++++.++.|.+|
T Consensus 235 ~~~~~~~~~~~~~~s~dg~~l~~~--~~~v~~~d~~~-----~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~i~v~ 306 (337)
T 1pby_B 235 EVRIMDVFYFSTAVNPAKTRAFGA--YNVLESFDLEK-----NASIKRVPL-PHSYYSVNVSTDGSTVWLGGALGDLAAY 306 (337)
T ss_dssp EEEECSSCEEEEEECTTSSEEEEE--ESEEEEEETTT-----TEEEEEEEC-SSCCCEEEECTTSCEEEEESBSSEEEEE
T ss_pred ecCCCCCceeeEEECCCCCEEEEe--CCeEEEEECCC-----CcCcceecC-CCceeeEEECCCCCEEEEEcCCCcEEEE
Confidence 011223457888443222555 78999999976 444444433 2456889999999999999999999999
Q ss_pred EcCCCcchhhhh
Q psy13207 181 KLKKKRKKKKEE 192 (197)
Q Consensus 181 ~~~~~~~~~~~~ 192 (197)
|+.+++....++
T Consensus 307 d~~~~~~~~~~~ 318 (337)
T 1pby_B 307 DAETLEKKGQVD 318 (337)
T ss_dssp ETTTCCEEEEEE
T ss_pred ECcCCcEEEEEE
Confidence 999877655443
No 140
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.52 E-value=7.3e-13 Score=97.85 Aligned_cols=172 Identities=8% Similarity=0.003 Sum_probs=116.3
Q ss_pred ccccceeeee-----eeecCCCcceeEEEECCCCCCc-EEEEEeCCCcEEEEEcCCcccccceeccceec--c--CCCee
Q psy13207 9 EKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGL-VLATCAADGLVRIYEAPDVMNLSQWCLQHEVA--C--PTLAS 78 (197)
Q Consensus 9 ~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~--~--~~~~~ 78 (197)
++.+..|+.. ..+. ....+..+.|+|+ |+ .+++...++.|.+||..+++.+..+....... . ...+.
T Consensus 68 ~~~v~~~d~~~~~~~~~~~-~~~~~~~~~~s~d--g~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~ 144 (353)
T 3vgz_A 68 GGVVYRLDPVTLEVTQAIH-NDLKPFGATINNT--TQTLWFGNTVNSAVTAIDAKTGEVKGRLVLDDRKRTEEVRPLQPR 144 (353)
T ss_dssp SEEEEEECTTTCCEEEEEE-ESSCCCSEEEETT--TTEEEEEETTTTEEEEEETTTCCEEEEEESCCCCCCSSCCCCEEE
T ss_pred CccEEEEcCCCCeEEEEEe-cCCCcceEEECCC--CCEEEEEecCCCEEEEEeCCCCeeEEEEecCCCccccccCCCCCc
Confidence 5677777643 1222 2345788999998 77 45566678999999999887654443321110 0 12368
Q ss_pred eEEEccCCCcccce-------eEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceee
Q psy13207 79 CLTWNHSFSRFNSI-------SIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIET 145 (197)
Q Consensus 79 ~~~~~~~~~~~~~~-------~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~ 145 (197)
++.|+|+++.++.+ +.+|| +..+. .+...+.+++|+++.-.+++++.++.|.+||..+ .+.
T Consensus 145 ~~~~s~dg~~l~~~~~~~~~~i~~~d~~~~~~~~~~~-~~~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~-----~~~ 218 (353)
T 3vgz_A 145 ELVADDATNTVYISGIGKESVIWVVDGGNIKLKTAIQ-NTGKMSTGLALDSEGKRLYTTNADGELITIDTAD-----NKI 218 (353)
T ss_dssp EEEEETTTTEEEEEEESSSCEEEEEETTTTEEEEEEC-CCCTTCCCCEEETTTTEEEEECTTSEEEEEETTT-----TEE
T ss_pred eEEECCCCCEEEEEecCCCceEEEEcCCCCceEEEec-CCCCccceEEECCCCCEEEEEcCCCeEEEEECCC-----CeE
Confidence 89999999875432 67888 33443 3556688899984332237888899999999976 344
Q ss_pred eeeec----CceecEEEEEEccCCCEEEEEeC-CCcEEEEEcCCCcchh
Q psy13207 146 IGNFE----DHYCTVWRVSWNITGTIVASSGD-DGCVRLWKLKKKRKKK 189 (197)
Q Consensus 146 ~~~~~----~h~~~v~~~~~~p~~~~l~~~~~-dg~i~iw~~~~~~~~~ 189 (197)
...+. ++...+..++|+|+|++++.++. ++.|.+||..+++...
T Consensus 219 ~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~v~~~d~~~~~~~~ 267 (353)
T 3vgz_A 219 LSRKKLLDDGKEHFFINISLDTARQRAFITDSKAAEVLVVDTRNGNILA 267 (353)
T ss_dssp EEEEECCCSSSCCCEEEEEEETTTTEEEEEESSSSEEEEEETTTCCEEE
T ss_pred EEEEEcCCCCCCcccceEEECCCCCEEEEEeCCCCEEEEEECCCCcEEE
Confidence 43333 24556889999999997777664 5999999998876543
No 141
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.51 E-value=1.1e-13 Score=111.87 Aligned_cols=174 Identities=9% Similarity=0.099 Sum_probs=112.4
Q ss_pred cccccceeeeee-----eecCCCc---ceeEEEECCCCCCcEEEEEeC---------CCcEEEEEcCCcccccceeccce
Q psy13207 8 SEKCLNQWTRRS-----NLVDSRT---SVTDVKFGPKQLGLVLATCAA---------DGLVRIYEAPDVMNLSQWCLQHE 70 (197)
Q Consensus 8 ~~~~~~~w~~~~-----~~~~h~~---~v~~~~~~~~~~~~~l~s~~~---------dg~v~iw~~~~~~~~~~~~~~~~ 70 (197)
.++++++|+... .+.+|.. .+.+++|+|+ |++|++++. ++.|++||+.+++.+....+
T Consensus 34 ~d~~i~~~~~~~g~~~~~~~~~~~~~~~~~~~~~SpD--g~~la~~~~~~~~~~~s~~~~i~~~d~~~g~~~~~~~l--- 108 (719)
T 1z68_A 34 ADNNIVLYNIETGQSYTILSNRTMKSVNASNYGLSPD--RQFVYLESDYSKLWRYSYTATYYIYDLSNGEFVRGNEL--- 108 (719)
T ss_dssp TTSCEEEEESSSCCEEEEECHHHHHTTTCSEEEECTT--SSEEEEEEEEEECSSSCEEEEEEEEETTTTEECCSSCC---
T ss_pred CCCCEEEEEcCCCcEEEEEccccccccceeeEEECCC--CCeEEEEecCceeEEeecceEEEEEECCCCccccceec---
Confidence 467888998642 2333333 3899999999 999998876 78999999988764211111
Q ss_pred eccCCCeeeEEEccCCCcccce----eEEEEe-----eEec-ccCCCce-----------------eEEEEcCCCeEEEE
Q psy13207 71 VACPTLASCLTWNHSFSRFNSI----SIMYEA-----HSIN-AEHKDLI-----------------HDVAYDYYGLRMAT 123 (197)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~----~~~~~~-----~~~~-~~~~~~i-----------------~~~~~~~~~~~~~s 123 (197)
...+..++|+|+|+.++.+ +++|++ ..+. .++...+ .+++|+|+.-.|+.
T Consensus 109 ---~~~~~~~~~SPDG~~la~~~~~~i~~~~~~~g~~~~l~~~~~~~~v~~g~~~~v~~ee~~~~~~~~~wSPDG~~la~ 185 (719)
T 1z68_A 109 ---PRPIQYLCWSPVGSKLAYVYQNNIYLKQRPGDPPFQITFNGRENKIFNGIPDWVYEEEMLATKYALWWSPNGKFLAY 185 (719)
T ss_dssp ---CSSBCCEEECSSTTCEEEEETTEEEEESSTTSCCEECCCCCBTTTEEESSCCHHHHHHTTCSSCCEEECTTSSEEEE
T ss_pred ---CcccccceECCCCCEEEEEECCeEEEEeCCCCCcEEEecCCCcCCeEcccccceeeeecccCcccEEECCCCCEEEE
Confidence 2467889999999998765 788882 1111 1222222 48999955433377
Q ss_pred eeCCC----------------------------------eEEEEEccCCcccceeee---eeecCceecEEEEEEccCCC
Q psy13207 124 CSSDQ----------------------------------NIKVTRDVMGTRFDIETI---GNFEDHYCTVWRVSWNITGT 166 (197)
Q Consensus 124 ~~~d~----------------------------------~i~~~d~~~~~~~~~~~~---~~~~~h~~~v~~~~~~p~~~ 166 (197)
++.|. .|++||+.+........+ ..+.+|...+..++|+||++
T Consensus 186 ~~~d~~~~~~~~~~~~~~~~~~~~~~~~yp~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~SpD~~ 265 (719)
T 1z68_A 186 AEFNDTDIPVIAYSYYGDEQYPRTINIPYPKAGAKNPVVRIFIIDTTYPAYVGPQEVPVPAMIASSDYYFSWLTWVTDER 265 (719)
T ss_dssp EEEECTTSCEEEEEECCSSSSCEEEEEECCBTTSCCCEEEEEEEESSCHHHHCCEECCCCHHHHTSCEEEEEEEESSSSE
T ss_pred EEECCCCCceEEeeccCCCCCccceeecCCCCCCCCCeeEEEEEECCCCCccceeEccCCccCCCCcceEEEeEEeCCCe
Confidence 66542 788999875211000011 22446788899999999988
Q ss_pred EEEEEeCC----CcEEEEE----cCCCcchh
Q psy13207 167 IVASSGDD----GCVRLWK----LKKKRKKK 189 (197)
Q Consensus 167 ~l~~~~~d----g~i~iw~----~~~~~~~~ 189 (197)
++++.... ..|.+|| +.+++...
T Consensus 266 ~~~~~~~~~~~~~~l~~~d~~~~~~~g~~~~ 296 (719)
T 1z68_A 266 VCLQWLKRVQNVSVLSICDFREDWQTWDCPK 296 (719)
T ss_dssp EEEEEEESSTTEEEEEEEEECSSSSSEECCG
T ss_pred EEEEEeccccCeEEEEEEcccCCCCCCceEE
Confidence 77775432 2488889 66654433
No 142
>3hfq_A Uncharacterized protein LP_2219; Q88V64_lacpl, NESG, LPR118, structural genomics, PSI-2, protein structure initiative; 1.96A {Lactobacillus plantarum}
Probab=99.50 E-value=8e-12 Score=92.41 Aligned_cols=172 Identities=9% Similarity=0.021 Sum_probs=109.6
Q ss_pred ccccceeeeee-------eecCCCcceeEEEECCCCCCcEEEEEe-CCCcEEEEEcCCcccccceeccceec--------
Q psy13207 9 EKCLNQWTRRS-------NLVDSRTSVTDVKFGPKQLGLVLATCA-ADGLVRIYEAPDVMNLSQWCLQHEVA-------- 72 (197)
Q Consensus 9 ~~~~~~w~~~~-------~~~~h~~~v~~~~~~~~~~~~~l~s~~-~dg~v~iw~~~~~~~~~~~~~~~~~~-------- 72 (197)
++.+..|++.. .+..+...+..++|+|+ |++|++++ .++.+.+|++............ ...
T Consensus 62 ~~~v~~~~~~~g~~~~~~~~~~~~~~p~~~a~spd--g~~l~~~~~~~~~v~v~~~~~~g~~~~~~~~-~~~~~~p~~~~ 138 (347)
T 3hfq_A 62 EGGIAAWQIDGQTAHKLNTVVAPGTPPAYVAVDEA--RQLVYSANYHKGTAEVMKIAADGALTLTDTV-QHSGHGPRPEQ 138 (347)
T ss_dssp EEEEEEEEEETTEEEEEEEEEEESCCCSEEEEETT--TTEEEEEETTTTEEEEEEECTTSCEEEEEEE-ECCCCCSSTTC
T ss_pred CceEEEEEecCCcEEEeeeeecCCCCCEEEEECCC--CCEEEEEeCCCCEEEEEEeCCCCCeeeccee-ecCCCCCCccc
Confidence 56788887641 23346678899999999 98888777 7899999999643222111100 000
Q ss_pred cCCCeeeEEEccCCCcccce-----eEEEEee---------EecccCCCceeEEEEcCCCe-EEEEeeCCCeEEEEEccC
Q psy13207 73 CPTLASCLTWNHSFSRFNSI-----SIMYEAH---------SINAEHKDLIHDVAYDYYGL-RMATCSSDQNIKVTRDVM 137 (197)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~-----~~~~~~~---------~~~~~~~~~i~~~~~~~~~~-~~~s~~~d~~i~~~d~~~ 137 (197)
....+.+++|+|+++.+++. +.+|++. .+..........++|+++.- +++++..++.|.+|++..
T Consensus 139 ~~~~~~~~~~spdg~l~v~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~ 218 (347)
T 3hfq_A 139 DGSHIHYTDLTPDNRLAVIDLGSDKVYVYNVSDAGQLSEQSVLTMEAGFGPRHLVFSPDGQYAFLAGELSSQIASLKYDT 218 (347)
T ss_dssp SSCCEEEEEECTTSCEEEEETTTTEEEEEEECTTSCEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEET
T ss_pred cCCCceEEEECCCCcEEEEeCCCCEEEEEEECCCCcEEEeeeEEcCCCCCCceEEECCCCCEEEEEeCCCCEEEEEEecC
Confidence 12347889999999944432 7888833 11101234677899994432 235566789999999864
Q ss_pred CcccceeeeeeecCce------ecEEEEEEccCCCEE-EEEeCCCcEEEEEcCC
Q psy13207 138 GTRFDIETIGNFEDHY------CTVWRVSWNITGTIV-ASSGDDGCVRLWKLKK 184 (197)
Q Consensus 138 ~~~~~~~~~~~~~~h~------~~v~~~~~~p~~~~l-~~~~~dg~i~iw~~~~ 184 (197)
.... ...+..+.... ..+..++|+|||++| ++...++.|.+|++..
T Consensus 219 ~~g~-~~~~~~~~~~~~~~~~~~~~~~i~~spdG~~l~v~~~~~~~v~v~~~~~ 271 (347)
T 3hfq_A 219 QTGA-FTQLGIVKTIPADYTAHNGAAAIRLSHDGHFLYVSNRGYNTLAVFAVTA 271 (347)
T ss_dssp TTTE-EEEEEEEESSCTTCCSCCEEEEEEECTTSCEEEEEEETTTEEEEEEECG
T ss_pred CCCc-eEEeeeeeecCCCCCCCCcceeEEECCCCCEEEEEeCCCCEEEEEEECC
Confidence 1100 12222222221 458899999999987 4556789999999974
No 143
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.50 E-value=2.2e-12 Score=94.62 Aligned_cols=167 Identities=11% Similarity=0.020 Sum_probs=111.8
Q ss_pred ccccceeee------eeeecCCCcceeEEEECCCCCCcEEEEEeCCC---cEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 9 EKCLNQWTR------RSNLVDSRTSVTDVKFGPKQLGLVLATCAADG---LVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 9 ~~~~~~w~~------~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg---~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
++.+..|+. ...+..+..+..++.|+|+ |++++++..++ .|.+||+.+++.+.. +.......+
T Consensus 61 ~~~i~~~d~~~~~~~~~~~~~~~~~~~~~~~s~d--g~~l~~~~~~~~~~~i~v~d~~~~~~~~~------~~~~~~~~~ 132 (331)
T 3u4y_A 61 CQTLVQIETQLEPPKVVAIQEGQSSMADVDITPD--DQFAVTVTGLNHPFNMQSYSFLKNKFIST------IPIPYDAVG 132 (331)
T ss_dssp TCEEEEEECSSSSCEEEEEEECSSCCCCEEECTT--SSEEEECCCSSSSCEEEEEETTTTEEEEE------EECCTTEEE
T ss_pred CCeEEEEECCCCceeEEecccCCCCccceEECCC--CCEEEEecCCCCcccEEEEECCCCCeEEE------EECCCCccc
Confidence 446666654 2334456666666999999 98888655553 899999988765432 223456689
Q ss_pred EEEccCCCcccce-------eEEEEee----------EecccCCCceeEEEEcCCCe-EEEEeeCCCeEEEEEccCCccc
Q psy13207 80 LTWNHSFSRFNSI-------SIMYEAH----------SINAEHKDLIHDVAYDYYGL-RMATCSSDQNIKVTRDVMGTRF 141 (197)
Q Consensus 80 ~~~~~~~~~~~~~-------~~~~~~~----------~~~~~~~~~i~~~~~~~~~~-~~~s~~~d~~i~~~d~~~~~~~ 141 (197)
++|+|++++++.+ +.+|++. ... ........++|+++.- +++++..++.|.+||+.+...
T Consensus 133 ~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~- 210 (331)
T 3u4y_A 133 IAISPNGNGLILIDRSSANTVRRFKIDADGVLFDTGQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN- 210 (331)
T ss_dssp EEECTTSSCEEEEEETTTTEEEEEEECTTCCEEEEEEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS-
T ss_pred eEECCCCCEEEEEecCCCceEEEEEECCCCcEeecCCccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc-
Confidence 9999999876432 6777721 111 2345678999994432 235666789999999976321
Q ss_pred ceeeeeeecCceecEEEEEEccCCCEEEEEe-CCCcEEEEEcCCCcc
Q psy13207 142 DIETIGNFEDHYCTVWRVSWNITGTIVASSG-DDGCVRLWKLKKKRK 187 (197)
Q Consensus 142 ~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~~~~~ 187 (197)
...+..+.. ...+..++|+|+|++++.++ .++.|.+||+.+++.
T Consensus 211 -~~~~~~~~~-~~~~~~~~~spdg~~l~v~~~~~~~i~~~d~~~~~~ 255 (331)
T 3u4y_A 211 -ITLLNAVGT-NNLPGTIVVSRDGSTVYVLTESTVDVFNFNQLSGTL 255 (331)
T ss_dssp -CEEEEEEEC-SSCCCCEEECTTSSEEEEECSSEEEEEEEETTTTEE
T ss_pred -cceeeeccC-CCCCceEEECCCCCEEEEEEcCCCEEEEEECCCCce
Confidence 111444443 35568899999999776654 578899999987654
No 144
>3u4y_A Uncharacterized protein; structural genomics, PSI-biology, protein structure initiati midwest center for structural genomi CS, MCSG; 2.99A {Desulfotomaculum acetoxidans}
Probab=99.49 E-value=1.4e-11 Score=90.31 Aligned_cols=169 Identities=7% Similarity=-0.070 Sum_probs=109.9
Q ss_pred ccccccceeeee-----eeecCCCcceeEEEECCCCCCcEEEEEe-CCCcEEEEEcCCccc-ccceeccceecc-CCCee
Q psy13207 7 QSEKCLNQWTRR-----SNLVDSRTSVTDVKFGPKQLGLVLATCA-ADGLVRIYEAPDVMN-LSQWCLQHEVAC-PTLAS 78 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~~h~~~v~~~~~~~~~~~~~l~s~~-~dg~v~iw~~~~~~~-~~~~~~~~~~~~-~~~~~ 78 (197)
..++.+.+|+.. ..+..+...+ +++|+|+ |+++++++ .++.|.+||+.+++. .. .+.. ..+..
T Consensus 17 ~~~~~v~~~d~~~~~~~~~~~~~~~~~-~~~~s~d--g~~l~~~~~~~~~i~~~d~~~~~~~~~------~~~~~~~~~~ 87 (331)
T 3u4y_A 17 QHLRRISFFSTDTLEILNQITLGYDFV-DTAITSD--CSNVVVTSDFCQTLVQIETQLEPPKVV------AIQEGQSSMA 87 (331)
T ss_dssp GGGTEEEEEETTTCCEEEEEECCCCEE-EEEECSS--SCEEEEEESTTCEEEEEECSSSSCEEE------EEEECSSCCC
T ss_pred cCCCeEEEEeCcccceeeeEEccCCcc-eEEEcCC--CCEEEEEeCCCCeEEEEECCCCceeEE------ecccCCCCcc
Confidence 456778888753 2344455566 9999999 87665555 489999999988754 22 1222 33444
Q ss_pred eEEEccCCCcccc--------eeEEEE------eeEecccCCCceeEEEEcCCC-eEEEEeeCCCe-EEEEEccCCcccc
Q psy13207 79 CLTWNHSFSRFNS--------ISIMYE------AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQN-IKVTRDVMGTRFD 142 (197)
Q Consensus 79 ~~~~~~~~~~~~~--------~~~~~~------~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~-i~~~d~~~~~~~~ 142 (197)
+++|+|+++++++ .+.+|+ +..+. ......+++|+++. .++++...++. |.+|++.......
T Consensus 88 ~~~~s~dg~~l~~~~~~~~~~~i~v~d~~~~~~~~~~~--~~~~~~~~~~spdg~~l~~~~~~~~~~i~~~~~~~~g~~~ 165 (331)
T 3u4y_A 88 DVDITPDDQFAVTVTGLNHPFNMQSYSFLKNKFISTIP--IPYDAVGIAISPNGNGLILIDRSSANTVRRFKIDADGVLF 165 (331)
T ss_dssp CEEECTTSSEEEECCCSSSSCEEEEEETTTTEEEEEEE--CCTTEEEEEECTTSSCEEEEEETTTTEEEEEEECTTCCEE
T ss_pred ceEECCCCCEEEEecCCCCcccEEEEECCCCCeEEEEE--CCCCccceEECCCCCEEEEEecCCCceEEEEEECCCCcEe
Confidence 4999999998642 478888 33333 34557899999442 22355556678 9999986421110
Q ss_pred eeeeeeecCceecEEEEEEccCCCEEEEE-eCCCcEEEEEcCCCcc
Q psy13207 143 IETIGNFEDHYCTVWRVSWNITGTIVASS-GDDGCVRLWKLKKKRK 187 (197)
Q Consensus 143 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~-~~dg~i~iw~~~~~~~ 187 (197)
......+ ........++|+|+|++++.+ ..++.|.+||+.+++.
T Consensus 166 ~~~~~~~-~~~~~~~~~~~spdg~~l~v~~~~~~~v~v~d~~~~~~ 210 (331)
T 3u4y_A 166 DTGQEFI-SGGTRPFNITFTPDGNFAFVANLIGNSIGILETQNPEN 210 (331)
T ss_dssp EEEEEEE-CSSSSEEEEEECTTSSEEEEEETTTTEEEEEECSSTTS
T ss_pred ecCCccc-cCCCCccceEECCCCCEEEEEeCCCCeEEEEECCCCcc
Confidence 1101222 233457899999999966554 4689999999987665
No 145
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.49 E-value=1.1e-11 Score=92.23 Aligned_cols=153 Identities=10% Similarity=0.053 Sum_probs=97.8
Q ss_pred ceeEEEECCCCCCcEEEE-EeCCCcEEEEEcCCccc------ccce--eccceeccCCCeeeEEEccCCCcccce-----
Q psy13207 27 SVTDVKFGPKQLGLVLAT-CAADGLVRIYEAPDVMN------LSQW--CLQHEVACPTLASCLTWNHSFSRFNSI----- 92 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s-~~~dg~v~iw~~~~~~~------~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 92 (197)
.+.++.|+|+ |++|+. ...++.|.+|++..... +... ..............++|+|++++++..
T Consensus 156 ~~~~~~~spd--g~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~~~~~ 233 (361)
T 3scy_A 156 HLHCVRITPD--GKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLINEIGG 233 (361)
T ss_dssp CEEEEEECTT--SSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTC
T ss_pred cceEEEECCC--CCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEcCCCC
Confidence 3578999999 876554 44589999999875432 1110 011122235567899999999976433
Q ss_pred -eEEEEee--------Eec--ccCCCceeEEEEcCCCeEEEEeeC--CCeEEEEEccCCcccceeeeeeecCceecEEEE
Q psy13207 93 -SIMYEAH--------SIN--AEHKDLIHDVAYDYYGLRMATCSS--DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159 (197)
Q Consensus 93 -~~~~~~~--------~~~--~~~~~~i~~~~~~~~~~~~~s~~~--d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~ 159 (197)
+.+|++. .+. ..+......++|+++.-+|++++. ++.|.+|++.... .....+..+.. ...+.++
T Consensus 234 ~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~~~~-g~~~~~~~~~~-g~~~~~~ 311 (361)
T 3scy_A 234 TVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVDETN-GTLTKVGYQLT-GIHPRNF 311 (361)
T ss_dssp EEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEECTTT-CCEEEEEEEEC-SSCCCEE
T ss_pred eEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEcCCC-CcEEEeeEecC-CCCCceE
Confidence 7888822 121 123345679999944433355554 5899999986211 01223333433 4467889
Q ss_pred EEccCCCEEEEEe-CCCcEEEEEcC
Q psy13207 160 SWNITGTIVASSG-DDGCVRLWKLK 183 (197)
Q Consensus 160 ~~~p~~~~l~~~~-~dg~i~iw~~~ 183 (197)
+|+|+|++|++++ .++.|.+|+++
T Consensus 312 ~~spdg~~l~~~~~~~~~v~v~~~d 336 (361)
T 3scy_A 312 IITPNGKYLLVACRDTNVIQIFERD 336 (361)
T ss_dssp EECTTSCEEEEEETTTTEEEEEEEC
T ss_pred EECCCCCEEEEEECCCCCEEEEEEE
Confidence 9999999888887 67899997665
No 146
>3vgz_A Uncharacterized protein YNCE; beta-propeller, protein binding; 1.70A {Escherichia coli} PDB: 3vh0_A*
Probab=99.49 E-value=1.5e-12 Score=96.17 Aligned_cols=149 Identities=8% Similarity=-0.011 Sum_probs=108.2
Q ss_pred CcceeEEEECCCCCCcEEEEEeC-------CCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc------
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAA-------DGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS------ 91 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~-------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 91 (197)
...+..++|+|+ ++.+++++. ++.|.+||..+++....+. ....+..++|+|+++.++.
T Consensus 40 ~~~~~~~~~s~d--g~~l~~~~~~~~~~~~~~~v~~~d~~~~~~~~~~~------~~~~~~~~~~s~dg~~l~v~~~~~~ 111 (353)
T 3vgz_A 40 GKGAYEMAYSQQ--ENALWLATSQSRKLDKGGVVYRLDPVTLEVTQAIH------NDLKPFGATINNTTQTLWFGNTVNS 111 (353)
T ss_dssp ESSEEEEEEETT--TTEEEEEECCCTTTEESEEEEEECTTTCCEEEEEE------ESSCCCSEEEETTTTEEEEEETTTT
T ss_pred ccCccceEECCC--CCEEEEEcCCCcCCCCCccEEEEcCCCCeEEEEEe------cCCCcceEEECCCCCEEEEEecCCC
Confidence 346788999998 877777763 5689999998876544332 2345788999999986533
Q ss_pred eeEEEE------eeEecccCCC---------ceeEEEEcC--CCeEEEEe--eCCCeEEEEEccCCcccceeeeeeecCc
Q psy13207 92 ISIMYE------AHSINAEHKD---------LIHDVAYDY--YGLRMATC--SSDQNIKVTRDVMGTRFDIETIGNFEDH 152 (197)
Q Consensus 92 ~~~~~~------~~~~~~~~~~---------~i~~~~~~~--~~~~~~s~--~~d~~i~~~d~~~~~~~~~~~~~~~~~h 152 (197)
.+.+|| +..+. .+.. .+.+++|++ +.+ +.+ +.++.|.+||.++ .+....+..+
T Consensus 112 ~v~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~s~dg~~l--~~~~~~~~~~i~~~d~~~-----~~~~~~~~~~ 183 (353)
T 3vgz_A 112 AVTAIDAKTGEVKGRLV-LDDRKRTEEVRPLQPRELVADDATNTV--YISGIGKESVIWVVDGGN-----IKLKTAIQNT 183 (353)
T ss_dssp EEEEEETTTCCEEEEEE-SCCCCCCSSCCCCEEEEEEEETTTTEE--EEEEESSSCEEEEEETTT-----TEEEEEECCC
T ss_pred EEEEEeCCCCeeEEEEe-cCCCccccccCCCCCceEEECCCCCEE--EEEecCCCceEEEEcCCC-----CceEEEecCC
Confidence 278888 34444 2221 268899983 434 443 3588999999976 5556666545
Q ss_pred eecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchh
Q psy13207 153 YCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 153 ~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~ 189 (197)
...+.+++|+|+|+++++++.++.|.+||..+++...
T Consensus 184 ~~~~~~~~~s~dg~~l~~~~~~~~i~~~d~~~~~~~~ 220 (353)
T 3vgz_A 184 GKMSTGLALDSEGKRLYTTNADGELITIDTADNKILS 220 (353)
T ss_dssp CTTCCCCEEETTTTEEEEECTTSEEEEEETTTTEEEE
T ss_pred CCccceEEECCCCCEEEEEcCCCeEEEEECCCCeEEE
Confidence 5567889999999999999999999999998876543
No 147
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.48 E-value=4e-13 Score=108.31 Aligned_cols=175 Identities=11% Similarity=0.111 Sum_probs=112.8
Q ss_pred ccccceeeee----eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCC-----cccccceeccce-e-------
Q psy13207 9 EKCLNQWTRR----SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPD-----VMNLSQWCLQHE-V------- 71 (197)
Q Consensus 9 ~~~~~~w~~~----~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~-----~~~~~~~~~~~~-~------- 71 (197)
++.+++|++. ..+..+...+.+++|+|+ |+.|+++ .|+.|++|++.+ ++.......... +
T Consensus 100 ~~~i~~~d~~~~~~~~l~~~~~~~~~~~~Spd--G~~la~~-~~~~i~v~~~~~~~~~~g~~~~~~~~~~~~~~~g~~~~ 176 (706)
T 2z3z_A 100 QGGLVGFDMLARKVTYLFDTNEETASLDFSPV--GDRVAYV-RNHNLYIARGGKLGEGMSRAIAVTIDGTETLVYGQAVH 176 (706)
T ss_dssp TTEEEEEETTTTEEEEEECCTTCCTTCEECTT--SSEEEEE-ETTEEEEEECBCTTSCCCCCEESCSCCBTTEEESSCCG
T ss_pred CCEEEEEECCCCceEEccCCcccccCCcCCCC--CCEEEEE-ECCeEEEEecCcccccCCCcEEeccCCCCCeEcccchh
Confidence 3667777753 234567778999999999 9999885 689999999987 543221110000 0
Q ss_pred -ccCCCeeeEEEccCCCcccce--------------------------------------eEEEE-----eeEec--ccC
Q psy13207 72 -ACPTLASCLTWNHSFSRFNSI--------------------------------------SIMYE-----AHSIN--AEH 105 (197)
Q Consensus 72 -~~~~~~~~~~~~~~~~~~~~~--------------------------------------~~~~~-----~~~~~--~~~ 105 (197)
+....+.++.|+|++++|+.+ +.+|| ...+. ..|
T Consensus 177 ~ee~~~~~~~~~SpDg~~la~~~~d~~~~~~~~~~~~~~~~~~~~~~~y~~~g~~~~~~~l~~~d~~~~~~~~~~~~~~~ 256 (706)
T 2z3z_A 177 QREFGIEKGTFWSPKGSCLAFYRMDQSMVKPTPIVDYHPLEAESKPLYYPMAGTPSHHVTVGIYHLATGKTVYLQTGEPK 256 (706)
T ss_dssp GGCTTCCCSEEECTTSSEEEEEEEECTTSCCEEEEECCSSSCEEEEECCCBTTSCCCEEEEEEEETTTTEEEECCCCSCT
T ss_pred hhhcCCCceEEECCCCCEEEEEEECCCCCceEEeeccCCCCCceEEeeCCCCCCCCCeeEEEEEECCCCceEeeccCCCC
Confidence 001125899999999987543 56777 11221 135
Q ss_pred CCceeEEEEcCCCeEEEEeeCCC-----eEEEEEccCCcccceeeeeeecCce---ecEEEEEEcc--CCCEEEEEeCCC
Q psy13207 106 KDLIHDVAYDYYGLRMATCSSDQ-----NIKVTRDVMGTRFDIETIGNFEDHY---CTVWRVSWNI--TGTIVASSGDDG 175 (197)
Q Consensus 106 ~~~i~~~~~~~~~~~~~s~~~d~-----~i~~~d~~~~~~~~~~~~~~~~~h~---~~v~~~~~~p--~~~~l~~~~~dg 175 (197)
...+..++|+++.-.|++++.++ .|.+||..++.. ...+.. ..+. ..+.+++|+| ||+++++++.|+
T Consensus 257 ~~~~~~~~~spdg~~l~~~~~~~~~~~~~v~~~d~~~g~~--~~~~~~-~~~~~~~~~~~~~~~sp~~dg~~l~~~~~~g 333 (706)
T 2z3z_A 257 EKFLTNLSWSPDENILYVAEVNRAQNECKVNAYDAETGRF--VRTLFV-ETDKHYVEPLHPLTFLPGSNNQFIWQSRRDG 333 (706)
T ss_dssp TCEEEEEEECTTSSEEEEEEECTTSCEEEEEEEETTTCCE--EEEEEE-EECSSCCCCCSCCEECTTCSSEEEEEECTTS
T ss_pred ceeEeeEEEECCCCEEEEEEeCCCCCeeEEEEEECCCCce--eeEEEE-ccCCCeECccCCceeecCCCCEEEEEEccCC
Confidence 67789999995443337766664 899999976311 111111 1111 1246789999 999999999999
Q ss_pred cEEEEEcC-CCcchh
Q psy13207 176 CVRLWKLK-KKRKKK 189 (197)
Q Consensus 176 ~i~iw~~~-~~~~~~ 189 (197)
.+++|.++ .++...
T Consensus 334 ~~~l~~~~~~~~~~~ 348 (706)
T 2z3z_A 334 WNHLYLYDTTGRLIR 348 (706)
T ss_dssp SCEEEEEETTSCEEE
T ss_pred ccEEEEEECCCCEEE
Confidence 99999886 344333
No 148
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.48 E-value=6.1e-13 Score=111.73 Aligned_cols=147 Identities=11% Similarity=0.018 Sum_probs=112.5
Q ss_pred CCcceeEEEEC-CCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCC-CeeeEEEccCCCcccce-----eE-E
Q psy13207 24 SRTSVTDVKFG-PKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPT-LASCLTWNHSFSRFNSI-----SI-M 95 (197)
Q Consensus 24 h~~~v~~~~~~-~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-----~~-~ 95 (197)
|...+.++.|+ |+ |+.|++++ ++.+.+|++..+.... + ..... .+..++|+ +++.++.. +. +
T Consensus 294 ~~~~v~~~~~S~pd--G~~la~~~-~~~i~~~~~~~~~~~~-~-----~~~~~~~~~~~~~s-dg~~l~~~s~~~~l~~~ 363 (1045)
T 1k32_A 294 SIPSKFAEDFSPLD--GDLIAFVS-RGQAFIQDVSGTYVLK-V-----PEPLRIRYVRRGGD-TKVAFIHGTREGDFLGI 363 (1045)
T ss_dssp ECGGGGEEEEEECG--GGCEEEEE-TTEEEEECTTSSBEEE-C-----SCCSCEEEEEECSS-SEEEEEEEETTEEEEEE
T ss_pred cccccceeeecCCC--CCEEEEEE-cCEEEEEcCCCCceEE-c-----cCCCcceEEeeeEc-CCCeEEEEECCCceEEE
Confidence 34479999999 99 99898887 7899999987654221 1 11233 67889999 88877653 45 5
Q ss_pred EE-----eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEE
Q psy13207 96 YE-----AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVAS 170 (197)
Q Consensus 96 ~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~ 170 (197)
|+ ...+. .|...+..++|+|+.-+|++++.++.|++||+.+ ++......+|...+.+++|+|||++|++
T Consensus 364 ~d~~~~~~~~l~-~~~~~~~~~~~SpDG~~la~~~~~~~v~~~d~~t-----g~~~~~~~~~~~~v~~~~~SpDG~~la~ 437 (1045)
T 1k32_A 364 YDYRTGKAEKFE-ENLGNVFAMGVDRNGKFAVVANDRFEIMTVDLET-----GKPTVIERSREAMITDFTISDNSRFIAY 437 (1045)
T ss_dssp EETTTCCEEECC-CCCCSEEEEEECTTSSEEEEEETTSEEEEEETTT-----CCEEEEEECSSSCCCCEEECTTSCEEEE
T ss_pred EECCCCCceEec-CCccceeeeEECCCCCEEEEECCCCeEEEEECCC-----CceEEeccCCCCCccceEECCCCCeEEE
Confidence 66 44555 6778899999995544449999999999999976 4555555578888999999999999998
Q ss_pred EeCCC----------cEEEEEcCCCc
Q psy13207 171 SGDDG----------CVRLWKLKKKR 186 (197)
Q Consensus 171 ~~~dg----------~i~iw~~~~~~ 186 (197)
++.++ .|++||+.+++
T Consensus 438 ~~~~~~~~~~~~~~~~i~l~d~~~g~ 463 (1045)
T 1k32_A 438 GFPLKHGETDGYVMQAIHVYDMEGRK 463 (1045)
T ss_dssp EEEECSSTTCSCCEEEEEEEETTTTE
T ss_pred EecCccccccCCCCCeEEEEECCCCc
Confidence 87654 89999998754
No 149
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.47 E-value=1.5e-12 Score=95.95 Aligned_cols=151 Identities=9% Similarity=0.018 Sum_probs=102.4
Q ss_pred ceeEEEECCCCCCcEEEEEeCC------------CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce--
Q psy13207 27 SVTDVKFGPKQLGLVLATCAAD------------GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-- 92 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~d------------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 92 (197)
.+.++.|+|+ |++|++++.+ +.|.+||+.+++..... ........+.+++|+|+++.++.+
T Consensus 93 ~~~~~~~spd--g~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~~~~~---~~~~~~~~~~~~~~s~dg~l~~~~~~ 167 (349)
T 1jmx_B 93 SMYSFAISPD--GKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLEAKPV---RTFPMPRQVYLMRAADDGSLYVAGPD 167 (349)
T ss_dssp CSSCEEECTT--SSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGGBCCS---EEEECCSSCCCEEECTTSCEEEESSS
T ss_pred cccceEECCC--CCEEEEEcccccccccccccCCCeEEEEECCCcccccee---eeccCCCcccceeECCCCcEEEccCc
Confidence 3789999999 9888888865 99999999875433221 222234468899999999844322
Q ss_pred eEEEE------eeEecccCC------------------------------------------------------------
Q psy13207 93 SIMYE------AHSINAEHK------------------------------------------------------------ 106 (197)
Q Consensus 93 ~~~~~------~~~~~~~~~------------------------------------------------------------ 106 (197)
+.+|| +..+. .+.
T Consensus 168 i~~~d~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~~~~~~~~ 246 (349)
T 1jmx_B 168 IYKMDVKTGKYTVALP-LRNWNRKGYSAPDVLYFWPHQSPRHEFSMLYTIARFKDDKQDPATADLLYGYLSVDLKTGKTH 246 (349)
T ss_dssp EEEECTTTCCEEEEEC-STTCCCTTBCCCBCCCCCCCCCTTCEEEEEEEEEEC-------CCCEEEEEEEEEETTTCCEE
T ss_pred EEEEeCCCCceecccc-ccccCCccccCccceeeecCCCcceeEEeeeeeeecCCCcCCccccccceeEEEEeccCCcEE
Confidence 67777 22222 111
Q ss_pred --------CceeEEEEcC-CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcE
Q psy13207 107 --------DLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCV 177 (197)
Q Consensus 107 --------~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i 177 (197)
..+..++|++ +.-+++++ ++.|.+||+++ .+.+..+.. ...+.+++|+|+|++|++++.++.|
T Consensus 247 ~~~~~~~~~~~~~~~~sp~dg~~l~~~--~~~v~~~d~~~-----~~~~~~~~~-~~~~~~~~~s~dg~~l~~~~~~~~v 318 (349)
T 1jmx_B 247 TQEFADLTELYFTGLRSPKDPNQIYGV--LNRLAKYDLKQ-----RKLIKAANL-DHTYYCVAFDKKGDKLYLGGTFNDL 318 (349)
T ss_dssp EEEEEECSSCEEEEEECSSCTTEEEEE--ESEEEEEETTT-----TEEEEEEEC-SSCCCEEEECSSSSCEEEESBSSEE
T ss_pred ecccccCCCcceeeEecCCCCCEEEEE--cCeEEEEECcc-----CeEEEEEcC-CCCccceEECCCCCEEEEecCCCeE
Confidence 1233445555 44333555 88999999976 444444432 2346789999999989888889999
Q ss_pred EEEEcCCCcchhhh
Q psy13207 178 RLWKLKKKRKKKKE 191 (197)
Q Consensus 178 ~iw~~~~~~~~~~~ 191 (197)
.+||+.+.+....+
T Consensus 319 ~v~d~~~~~~~~~~ 332 (349)
T 1jmx_B 319 AVFNPDTLEKVKNI 332 (349)
T ss_dssp EEEETTTTEEEEEE
T ss_pred EEEeccccceeeee
Confidence 99999887665544
No 150
>1xfd_A DIP, dipeptidyl aminopeptidase-like protein 6, dipeptidylpeptidase 6; DPPX, DPP6, KV4, KV, KAF, membrane protein; HET: NDG NAG BMA MAN; 3.00A {Homo sapiens} SCOP: b.70.3.1 c.69.1.24
Probab=99.46 E-value=1.1e-13 Score=111.76 Aligned_cols=139 Identities=12% Similarity=0.030 Sum_probs=92.0
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-------------
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------------- 92 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 92 (197)
..+.+++|+|+ |+++++ +.||+|++||+.+++....+.. ... ....+.+++|+|+|++++.+
T Consensus 17 ~~~~~~~~spd--g~~~~~-~~dg~i~~~d~~~g~~~~~~~~-~~~-~~~~v~~~~~SpDg~~l~~~~~~~~~~~~~~~~ 91 (723)
T 1xfd_A 17 IHDPEAKWISD--TEFIYR-EQKGTVRLWNVETNTSTVLIEG-KKI-ESLRAIRYEISPDREYALFSYNVEPIYQHSYTG 91 (723)
T ss_dssp CCCCCCCBSSS--SCBCCC-CSSSCEEEBCGGGCCCEEEECT-TTT-TTTTCSEEEECTTSSEEEEEESCCCCSSSCCCS
T ss_pred ccccccEEcCC--CcEEEE-eCCCCEEEEECCCCcEEEEecc-ccc-cccccceEEECCCCCEEEEEecCccceeeccee
Confidence 34788999999 887766 7899999999988754322211 000 01248999999999987644
Q ss_pred -eEEEE-----eeEec--ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCcee----------
Q psy13207 93 -SIMYE-----AHSIN--AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC---------- 154 (197)
Q Consensus 93 -~~~~~-----~~~~~--~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~---------- 154 (197)
+.+|+ ...+. ..|...+..++|+|+.-.|+.++. +.|++||..+ ++.......+..
T Consensus 92 ~i~~~d~~~~~~~~l~~~~~~~~~~~~~~~SPdG~~la~~~~-~~i~~~~~~~-----g~~~~~~~~~~~~~~~~g~~~~ 165 (723)
T 1xfd_A 92 YYVLSKIPHGDPQSLDPPEVSNAKLQYAGWGPKGQQLIFIFE-NNIYYCAHVG-----KQAIRVVSTGKEGVIYNGLSDW 165 (723)
T ss_dssp EEEEEESSSCCCEECCCTTCCSCCCSBCCBCSSTTCEEEEET-TEEEEESSSS-----SCCEEEECCCBTTTEEEEECCH
T ss_pred eEEEEECCCCceEeccCCccccccccccEECCCCCEEEEEEC-CeEEEEECCC-----CceEEEecCCCCCceECcccce
Confidence 45898 22232 133445888999944322277665 7999999976 233332332222
Q ss_pred --------cEEEEEEccCCCEEEEEeCCC
Q psy13207 155 --------TVWRVSWNITGTIVASSGDDG 175 (197)
Q Consensus 155 --------~v~~~~~~p~~~~l~~~~~dg 175 (197)
.+.+++|+|||++|++++.|+
T Consensus 166 v~~ee~~~~~~~~~~SpDg~~la~~~~~~ 194 (723)
T 1xfd_A 166 LYEEEILKTHIAHWWSPDGTRLAYAAIND 194 (723)
T ss_dssp HHHHTTSSSSEEEEECTTSSEEEEEEEEC
T ss_pred eEEEEeccCcceEEECCCCCEEEEEEECC
Confidence 237899999999999988653
No 151
>1nir_A Nitrite reductase; hemoprotein, denitrification, domain swapping; HET: HEC DHE; 2.15A {Pseudomonas aeruginosa} SCOP: a.3.1.2 b.70.2.1 PDB: 1bl9_A* 1n15_A* 1n50_A* 1n90_A* 1gjq_A* 1nno_A* 1hzv_A* 1hzu_A*
Probab=99.45 E-value=8.4e-12 Score=98.03 Aligned_cols=166 Identities=11% Similarity=0.055 Sum_probs=113.5
Q ss_pred cccccceeee--e-----eeecCCCcceeEEEECC----CCCCcEEEEEe-CCCcEEEEEcCCcccccceeccce-----
Q psy13207 8 SEKCLNQWTR--R-----SNLVDSRTSVTDVKFGP----KQLGLVLATCA-ADGLVRIYEAPDVMNLSQWCLQHE----- 70 (197)
Q Consensus 8 ~~~~~~~w~~--~-----~~~~~h~~~v~~~~~~~----~~~~~~l~s~~-~dg~v~iw~~~~~~~~~~~~~~~~----- 70 (197)
.++.+++|++ . .++. +...+..++|+| + |++|++++ .+++|.+||..+.+.+..+.....
T Consensus 198 ~d~~V~v~D~~~~t~~~~~~i~-~g~~p~~va~sp~~~~d--g~~l~v~~~~~~~v~v~D~~t~~~~~~i~~~g~~~~~~ 274 (543)
T 1nir_A 198 RDARIDMIDLWAKEPTKVAEIK-IGIEARSVESSKFKGYE--DRYTIAGAYWPPQFAIMDGETLEPKQIVSTRGMTVDTQ 274 (543)
T ss_dssp TTSEEEEEETTSSSCEEEEEEE-CCSEEEEEEECCSTTCT--TTEEEEEEEESSEEEEEETTTCCEEEEEECCEECSSSC
T ss_pred CCCeEEEEECcCCCCcEEEEEe-cCCCcceEEeCCCcCCC--CCEEEEEEccCCeEEEEeccccccceeecccCcccCcc
Confidence 3478888887 2 2344 445679999999 9 99998887 489999999988876655443110
Q ss_pred -eccCCCeeeEEEccCCCcccce------eEEEEe------e--EecccCCCceeEEEEcCCCeE-EEEeeCCCeEEEEE
Q psy13207 71 -VACPTLASCLTWNHSFSRFNSI------SIMYEA------H--SINAEHKDLIHDVAYDYYGLR-MATCSSDQNIKVTR 134 (197)
Q Consensus 71 -~~~~~~~~~~~~~~~~~~~~~~------~~~~~~------~--~~~~~~~~~i~~~~~~~~~~~-~~s~~~d~~i~~~d 134 (197)
+.....+..+.++|++..+..+ +.+||. . .+ .+...+..+.|+++.-+ ++++..++.|.+||
T Consensus 275 ~~~~~~~v~~i~~s~~~~~~~vs~~~~g~i~vvd~~~~~~l~~~~i--~~~~~~~~~~~spdg~~l~va~~~~~~v~v~D 352 (543)
T 1nir_A 275 TYHPEPRVAAIIASHEHPEFIVNVKETGKVLLVNYKDIDNLTVTSI--GAAPFLHDGGWDSSHRYFMTAANNSNKVAVID 352 (543)
T ss_dssp CEESCCCEEEEEECSSSSEEEEEETTTTEEEEEECTTSSSCEEEEE--ECCSSCCCEEECTTSCEEEEEEGGGTEEEEEE
T ss_pred ccccCCceEEEEECCCCCEEEEEECCCCeEEEEEecCCCcceeEEe--ccCcCccCceECCCCCEEEEEecCCCeEEEEE
Confidence 0113378899999988775433 678882 1 22 35667888999944332 24555689999999
Q ss_pred ccCCcccceeeeeeecC----ceecEEEEEEccC-CCEEEEEe-CCCcEEEEEcCC
Q psy13207 135 DVMGTRFDIETIGNFED----HYCTVWRVSWNIT-GTIVASSG-DDGCVRLWKLKK 184 (197)
Q Consensus 135 ~~~~~~~~~~~~~~~~~----h~~~v~~~~~~p~-~~~l~~~~-~dg~i~iw~~~~ 184 (197)
..+ ++++..+.. |......+ ++|+ +.+++++. .|++|.+||+.+
T Consensus 353 ~~t-----g~l~~~i~~g~~ph~g~g~~~-~~p~~g~~~~s~~~~d~~V~v~d~~~ 402 (543)
T 1nir_A 353 SKD-----RRLSALVDVGKTPHPGRGANF-VHPKYGPVWSTSHLGDGSISLIGTDP 402 (543)
T ss_dssp TTT-----TEEEEEEECSSSBCCTTCEEE-EETTTEEEEEEEBSSSSEEEEEECCT
T ss_pred CCC-----CeEEEeeccCCCCCCCCCccc-CCCCCccEEEeccCCCceEEEEEeCC
Confidence 987 455555543 54433333 4777 66677775 589999999987
No 152
>3scy_A Hypothetical bacterial 6-phosphogluconolactonase; 7-bladed beta-propeller, structural genomics, joint center F structural genomics, JCSG; HET: MSE; 1.50A {Bacteroides fragilis} PDB: 3fgb_A
Probab=99.43 E-value=1e-10 Score=86.94 Aligned_cols=171 Identities=9% Similarity=0.022 Sum_probs=105.1
Q ss_pred ccccceeeeee---------eecCCCcceeEEEECCCCCCcEEEEEe-CCCcEEEEEcCCcccccceeccceecc-----
Q psy13207 9 EKCLNQWTRRS---------NLVDSRTSVTDVKFGPKQLGLVLATCA-ADGLVRIYEAPDVMNLSQWCLQHEVAC----- 73 (197)
Q Consensus 9 ~~~~~~w~~~~---------~~~~h~~~v~~~~~~~~~~~~~l~s~~-~dg~v~iw~~~~~~~~~~~~~~~~~~~----- 73 (197)
++.+..|++.. ....+......+++ + +++|++++ .++.+.+|++.....+..........+
T Consensus 74 ~~~v~~~~~~~~~g~~~~~~~~~~~~~~p~~~~~--d--g~~l~~~~~~~~~v~~~~~~~~g~~~~~~~~~~~~g~~~~~ 149 (361)
T 3scy_A 74 QAAVSAFAFDKEKGTLHLLNTQKTMGADPCYLTT--N--GKNIVTANYSGGSITVFPIGQDGALLPASDVIEFKGSGPDK 149 (361)
T ss_dssp TCEEEEEEEETTTTEEEEEEEEECSSSCEEEEEE--C--SSEEEEEETTTTEEEEEEBCTTSCBCSCSEEEECCCCCSCT
T ss_pred CCcEEEEEEeCCCCcEEEeeEeccCCCCcEEEEE--C--CCEEEEEECCCCEEEEEEeCCCCcCcccceeEEccCCCCCc
Confidence 46777776542 12234455677777 5 66666655 688999999976543322211111111
Q ss_pred ----CCCeeeEEEccCCCcccce------eEEEEee------------------EecccCCCceeEEEEcCCCeEEEEee
Q psy13207 74 ----PTLASCLTWNHSFSRFNSI------SIMYEAH------------------SINAEHKDLIHDVAYDYYGLRMATCS 125 (197)
Q Consensus 74 ----~~~~~~~~~~~~~~~~~~~------~~~~~~~------------------~~~~~~~~~i~~~~~~~~~~~~~s~~ 125 (197)
...+.+++|+|++++++.+ +.+|++. .....+......++|+++.-++++++
T Consensus 150 ~~~~~~~~~~~~~spdg~~l~~~~~~~~~v~v~~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~spdg~~l~v~~ 229 (361)
T 3scy_A 150 ERQTMPHLHCVRITPDGKYLLADDLGTDQIHKFNINPNANADNKEKFLTKGTPEAFKVAPGSGPRHLIFNSDGKFAYLIN 229 (361)
T ss_dssp TTCSSCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTCCTTTCCCCEEEEEEEEEECCTTCCEEEEEECTTSSEEEEEE
T ss_pred cccCCCcceEEEECCCCCEEEEEeCCCCEEEEEEEcCCCCcccccceeecccccceecCCCCCCeEEEEcCCCCEEEEEc
Confidence 2345789999999976433 6888732 11112345678999995442225555
Q ss_pred -CCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeC--CCcEEEEEcC
Q psy13207 126 -SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGD--DGCVRLWKLK 183 (197)
Q Consensus 126 -~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~--dg~i~iw~~~ 183 (197)
.++.|.+|++.++.......+.....+......++|+|||++|+++.. ++.|.+|++.
T Consensus 230 ~~~~~v~v~~~~~g~~~~~~~~~~~~~~~~~~~~i~~spdg~~l~v~~~~~~~~i~v~~~~ 290 (361)
T 3scy_A 230 EIGGTVIAFRYADGMLDEIQTVAADTVNAQGSGDIHLSPDGKYLYASNRLKADGVAIFKVD 290 (361)
T ss_dssp TTTCEEEEEEEETTEEEEEEEEESCSSCCCCEEEEEECTTSSEEEEEECSSSCEEEEEEEC
T ss_pred CCCCeEEEEEecCCceEEeEEEecCCCCCCCcccEEECCCCCEEEEECCCCCCEEEEEEEc
Confidence 689999999975321111112223334455689999999999877665 4899999996
No 153
>2ecf_A Dipeptidyl peptidase IV; prolyl oligopeptidase family, peptidase family S9, hydrolase; 2.80A {Stenotrophomonas maltophilia}
Probab=99.43 E-value=4.5e-12 Score=102.64 Aligned_cols=150 Identities=11% Similarity=0.066 Sum_probs=102.8
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcc--cccceeccceeccCCCeeeEEEccCCCcccce----eEEEE---
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVM--NLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----SIMYE--- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--- 97 (197)
.|.+++|+|+ |++|++++. +.|.+||+.++. ....+ ......+..++|+|+|++++.. +.+|+
T Consensus 110 ~v~~~~~SpD--g~~l~~~~~-~~i~~~d~~~~~~~~~~~l-----~~~~~~~~~~~~SPDG~~la~~~~~~i~~~d~~~ 181 (741)
T 2ecf_A 110 GIVDYQWSPD--AQRLLFPLG-GELYLYDLKQEGKAAVRQL-----THGEGFATDAKLSPKGGFVSFIRGRNLWVIDLAS 181 (741)
T ss_dssp ESCCCEECTT--SSEEEEEET-TEEEEEESSSCSTTSCCBC-----CCSSSCEEEEEECTTSSEEEEEETTEEEEEETTT
T ss_pred CcceeEECCC--CCEEEEEeC-CcEEEEECCCCCcceEEEc-----ccCCcccccccCCCCCCEEEEEeCCcEEEEecCC
Confidence 4899999999 999998886 999999998762 11111 1124678999999999988654 78888
Q ss_pred --eeEecccCCCc----------------eeEEEEcCCCeEEEEeeCCC-------------------------------
Q psy13207 98 --AHSINAEHKDL----------------IHDVAYDYYGLRMATCSSDQ------------------------------- 128 (197)
Q Consensus 98 --~~~~~~~~~~~----------------i~~~~~~~~~~~~~s~~~d~------------------------------- 128 (197)
...+...+... +..++|+|+.-+|++++.|+
T Consensus 182 g~~~~~~~~~~~~~~~g~~~~v~~~~~~~~~~~~~SpDg~~l~~~~~d~~~~~~~~~~~~~p~~~~~~~~~~~~~g~~~~ 261 (741)
T 2ecf_A 182 GRQMQLTADGSTTIGNGIAEFVADEEMDRHTGYWWAPDDSAIAYARIDESPVPVQKRYEVYADRTDVIEQRYPAAGDANV 261 (741)
T ss_dssp TEEEECCCCCCSSEEESCCCHHHHHHSCCCCSEEECTTSSCEEEEEEECTTSCEEEEEEECSSCEEEEEEECCBTTSCCC
T ss_pred CCEEEeccCCccceeccccceeeeeccccccceEECCCCCEEEEEEEcCCCCceEecCCCCCCcccceEeecCCCCCCCC
Confidence 22222122221 47799994432237776654
Q ss_pred --eEEEEEccC-CcccceeeeeeecCceecEEEEEEccCCCEEEEEeC-----CCcEEEEEcCCCcch
Q psy13207 129 --NIKVTRDVM-GTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGD-----DGCVRLWKLKKKRKK 188 (197)
Q Consensus 129 --~i~~~d~~~-~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~-----dg~i~iw~~~~~~~~ 188 (197)
.|.+||+.+ ... ..+.....|...+..++| |||++|+.++. +..|++||+.+++..
T Consensus 262 ~~~l~~~d~~~~~~~---~~~~~~~~~~~~~~~~~~-pDg~~l~~~~~~~~~~~~~i~~~d~~~g~~~ 325 (741)
T 2ecf_A 262 QVKLGVISPAEQAQT---QWIDLGKEQDIYLARVNW-RDPQHLSFQRQSRDQKKLDLVEVTLASNQQR 325 (741)
T ss_dssp EEEEEEECSSTTCCC---EEECCCSCSSEEEEEEEE-EETTEEEEEEEETTSSEEEEEEEETTTCCEE
T ss_pred eeEEEEEECCCCCce---EEecCCCCcceEEEEEEe-CCCCEEEEEEecccCCeEEEEEEECCCCceE
Confidence 778888864 321 111111247788999999 99999997764 567999999876543
No 154
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.40 E-value=3.3e-12 Score=100.95 Aligned_cols=139 Identities=6% Similarity=-0.074 Sum_probs=98.9
Q ss_pred eeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---------eEEEE-
Q psy13207 28 VTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI---------SIMYE- 97 (197)
Q Consensus 28 v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~- 97 (197)
+....|+|++.+..+++++.|+ +.+||+.+++..... .... .++.|+|+|+.++.+ +++||
T Consensus 112 ~~~~~~s~dg~~~~~~s~~~~~-~~l~d~~~g~~~~l~------~~~~--~~~~~spDG~~la~~~~~~~~~~~i~~~d~ 182 (582)
T 3o4h_A 112 MRILSGVDTGEAVVFTGATEDR-VALYALDGGGLRELA------RLPG--FGFVSDIRGDLIAGLGFFGGGRVSLFTSNL 182 (582)
T ss_dssp BEEEEEEECSSCEEEEEECSSC-EEEEEEETTEEEEEE------EESS--CEEEEEEETTEEEEEEEEETTEEEEEEEET
T ss_pred ceeeeeCCCCCeEEEEecCCCC-ceEEEccCCcEEEee------cCCC--ceEEECCCCCEEEEEEEcCCCCeEEEEEcC
Confidence 4456777772234555555554 559999876432111 1111 789999999998732 57777
Q ss_pred ----eeEecccCCCceeEEEEcCCCeEEEEeeCCC--eEEEEEccCCcccceeeeeeecCceecEEEEE--------Ecc
Q psy13207 98 ----AHSINAEHKDLIHDVAYDYYGLRMATCSSDQ--NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS--------WNI 163 (197)
Q Consensus 98 ----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~--~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~--------~~p 163 (197)
...+. .|...+..++|+|+.-.|+++..++ .|++||+.+ .+.. .+.+|...+..++ |+|
T Consensus 183 ~~g~~~~l~-~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~-----~~~~-~~~~~~~~~~~~~~~~~~~~~~sp 255 (582)
T 3o4h_A 183 SSGGLRVFD-SGEGSFSSASISPGMKVTAGLETAREARLVTVDPRD-----GSVE-DLELPSKDFSSYRPTAITWLGYLP 255 (582)
T ss_dssp TTCCCEEEC-CSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTT-----CCEE-ECCCSCSHHHHHCCSEEEEEEECT
T ss_pred CCCCceEee-cCCCccccceECCCCCEEEEccCCCeeEEEEEcCCC-----CcEE-EccCCCcChhhhhhccccceeEcC
Confidence 55666 7888899999995544448888888 899999976 3333 5566666666666 999
Q ss_pred CCCEEEEEeCCCcEEEEEc
Q psy13207 164 TGTIVASSGDDGCVRLWKL 182 (197)
Q Consensus 164 ~~~~l~~~~~dg~i~iw~~ 182 (197)
||.++++++.|+++++|++
T Consensus 256 dg~~~~~~~~~g~~~l~~~ 274 (582)
T 3o4h_A 256 DGRLAVVARREGRSAVFID 274 (582)
T ss_dssp TSCEEEEEEETTEEEEEET
T ss_pred CCcEEEEEEcCCcEEEEEE
Confidence 9999999999999999998
No 155
>2z3z_A Dipeptidyl aminopeptidase IV; peptidase family S9, prolyl oligopeptidase family, serine PR proline-specific peptidase, hydrolase; HET: AIO; 1.95A {Porphyromonas gingivalis} PDB: 2z3w_A* 2d5l_A 2eep_A* 2dcm_A*
Probab=99.39 E-value=5.6e-11 Score=95.80 Aligned_cols=169 Identities=9% Similarity=0.056 Sum_probs=108.3
Q ss_pred cccccceeeeee----ee---cCCCcceeEEEECCCCCCcEEEEEeCCC-----cEEEEEcCCcccccceeccceeccCC
Q psy13207 8 SEKCLNQWTRRS----NL---VDSRTSVTDVKFGPKQLGLVLATCAADG-----LVRIYEAPDVMNLSQWCLQHEVACPT 75 (197)
Q Consensus 8 ~~~~~~~w~~~~----~~---~~h~~~v~~~~~~~~~~~~~l~s~~~dg-----~v~iw~~~~~~~~~~~~~~~~~~~~~ 75 (197)
.+..+.+|++.. .+ ..|...+.++.|+|+ |+.|++++.++ .|.+||+.+++...............
T Consensus 233 ~~~~l~~~d~~~~~~~~~~~~~~~~~~~~~~~~spd--g~~l~~~~~~~~~~~~~v~~~d~~~g~~~~~~~~~~~~~~~~ 310 (706)
T 2z3z_A 233 HHVTVGIYHLATGKTVYLQTGEPKEKFLTNLSWSPD--ENILYVAEVNRAQNECKVNAYDAETGRFVRTLFVETDKHYVE 310 (706)
T ss_dssp CEEEEEEEETTTTEEEECCCCSCTTCEEEEEEECTT--SSEEEEEEECTTSCEEEEEEEETTTCCEEEEEEEEECSSCCC
T ss_pred CeeEEEEEECCCCceEeeccCCCCceeEeeEEEECC--CCEEEEEEeCCCCCeeEEEEEECCCCceeeEEEEccCCCeEC
Confidence 345677776532 12 256778999999999 99999888776 99999998873222111110000012
Q ss_pred CeeeEEEcc--CCCcccce-----eEEEE-------eeEecccCCCceeE-EEEcCCC-eEEEEeeCCC----eEEEEEc
Q psy13207 76 LASCLTWNH--SFSRFNSI-----SIMYE-------AHSINAEHKDLIHD-VAYDYYG-LRMATCSSDQ----NIKVTRD 135 (197)
Q Consensus 76 ~~~~~~~~~--~~~~~~~~-----~~~~~-------~~~~~~~~~~~i~~-~~~~~~~-~~~~s~~~d~----~i~~~d~ 135 (197)
.+..+.|+| ++++++++ ..+|. +..+. .+...+.. ++|+++. .++++++.++ .|..||.
T Consensus 311 ~~~~~~~sp~~dg~~l~~~~~~g~~~l~~~~~~~~~~~~l~-~~~~~v~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~ 389 (706)
T 2z3z_A 311 PLHPLTFLPGSNNQFIWQSRRDGWNHLYLYDTTGRLIRQVT-KGEWEVTNFAGFDPKGTRLYFESTEASPLERHFYCIDI 389 (706)
T ss_dssp CCSCCEECTTCSSEEEEEECTTSSCEEEEEETTSCEEEECC-CSSSCEEEEEEECTTSSEEEEEESSSCTTCBEEEEEET
T ss_pred ccCCceeecCCCCEEEEEEccCCccEEEEEECCCCEEEecC-CCCeEEEeeeEEcCCCCEEEEEecCCCCceEEEEEEEc
Confidence 356789999 99877544 56776 34455 56666776 7999443 2224444444 5566666
Q ss_pred cCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC----CcEEEEEcCCCc
Q psy13207 136 VMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD----GCVRLWKLKKKR 186 (197)
Q Consensus 136 ~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d----g~i~iw~~~~~~ 186 (197)
.+ .. ...+. |...+.+++|+|||++++..+.+ +.+++||+.+++
T Consensus 390 ~~-----~~-~~~l~-~~~~~~~~~~spdg~~l~~~~~~~~~p~~i~l~d~~~~~ 437 (706)
T 2z3z_A 390 KG-----GK-TKDLT-PESGMHRTQLSPDGSAIIDIFQSPTVPRKVTVTNIGKGS 437 (706)
T ss_dssp TC-----CC-CEESC-CSSSEEEEEECTTSSEEEEEEECSSCSCEEEEEESSSCE
T ss_pred CC-----CC-ceecc-CCCceEEEEECCCCCEEEEEecCCCCCcEEEEEECCCCe
Confidence 54 22 22232 56678999999999988876544 459999997754
No 156
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=99.37 E-value=1.5e-11 Score=92.24 Aligned_cols=140 Identities=7% Similarity=0.001 Sum_probs=102.2
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccccc-----ceeccceeccCCCeeeEEEccCCCcccce----eEEEE
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLS-----QWCLQHEVACPTLASCLTWNHSFSRFNSI----SIMYE 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~-----~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~ 97 (197)
+++.+++++. ..++++|+.+ .+++|++.+.+... .+......+... +..++| ++..|+.+ +.+|+
T Consensus 39 ~~nlLais~~--~gll~a~~~~-~l~v~~~~~l~~~~~~~~~~~~~~~~~~lp~-V~~l~f--d~~~L~v~~~~~l~v~d 112 (388)
T 1xip_A 39 SLQNLDISNS--KSLFVAASGS-KAVVGELQLLRDHITSDSTPLTFKWEKEIPD-VIFVCF--HGDQVLVSTRNALYSLD 112 (388)
T ss_dssp CCBCEEEETT--TTEEEEEETT-EEEEEEHHHHHHHHHSSSCCCCCSEEEECTT-EEEEEE--ETTEEEEEESSEEEEEE
T ss_pred cccEEEEcCC--CCEEEEeCCC-EEEEEEhhHhhhhhccccccccceEEeeCCC-eeEEEE--CCCEEEEEcCCcEEEEE
Confidence 6899999998 8889999987 55569986554110 022112223345 999999 88877654 89999
Q ss_pred ------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEE
Q psy13207 98 ------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASS 171 (197)
Q Consensus 98 ------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~ 171 (197)
..... .|...+.++.+.+..+ ++++.||.+.+||++. ..... +...|.|++|||+| ++.|
T Consensus 113 v~sl~~~~~~~-~~~~~v~~i~~~~p~~--av~~~dG~L~v~dl~~-----~~~~~----~~~~Vs~v~WSpkG--~~vg 178 (388)
T 1xip_A 113 LEELSEFRTVT-SFEKPVFQLKNVNNTL--VILNSVNDLSALDLRT-----KSTKQ----LAQNVTSFDVTNSQ--LAVL 178 (388)
T ss_dssp SSSTTCEEEEE-ECSSCEEEEEECSSEE--EEEETTSEEEEEETTT-----CCEEE----EEESEEEEEECSSE--EEEE
T ss_pred chhhhccCccc-eeecceeeEEecCCCE--EEEECCCCEEEEEccC-----Ccccc----ccCCceEEEEcCCc--eEEE
Confidence 23333 5677788888873336 8999999999999975 22221 45689999999999 6788
Q ss_pred eCCCcEEEEEcCCCc
Q psy13207 172 GDDGCVRLWKLKKKR 186 (197)
Q Consensus 172 ~~dg~i~iw~~~~~~ 186 (197)
..||++++|+.....
T Consensus 179 ~~dg~i~~~~~~~~~ 193 (388)
T 1xip_A 179 LKDRSFQSFAWRNGE 193 (388)
T ss_dssp ETTSCEEEEEEETTE
T ss_pred EcCCcEEEEcCCCcc
Confidence 999999999887655
No 157
>1k32_A Tricorn protease; protein degradation, substrate gating, serine protease, beta propeller, proteasome, hydrolase; 2.00A {Thermoplasma acidophilum} SCOP: b.36.1.3 b.68.7.1 b.69.9.1 c.14.1.2 PDB: 1n6e_A 1n6d_A 1n6f_A*
Probab=99.36 E-value=2.9e-11 Score=101.66 Aligned_cols=148 Identities=7% Similarity=-0.123 Sum_probs=113.3
Q ss_pred ecCCCc-ceeEEEECCCCCCcEEEEEeCCCcEE-EEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----e
Q psy13207 21 LVDSRT-SVTDVKFGPKQLGLVLATCAADGLVR-IYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----S 93 (197)
Q Consensus 21 ~~~h~~-~v~~~~~~~~~~~~~l~s~~~dg~v~-iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~ 93 (197)
+..|.. .+..+.|+ + |+.|++++.++.+. +|++.+++... + ......+..++|+|+++.++.+ +
T Consensus 332 ~~~~~~~~~~~~~~s-d--g~~l~~~s~~~~l~~~~d~~~~~~~~-l-----~~~~~~~~~~~~SpDG~~la~~~~~~~v 402 (1045)
T 1k32_A 332 VPEPLRIRYVRRGGD-T--KVAFIHGTREGDFLGIYDYRTGKAEK-F-----EENLGNVFAMGVDRNGKFAVVANDRFEI 402 (1045)
T ss_dssp CSCCSCEEEEEECSS-S--EEEEEEEETTEEEEEEEETTTCCEEE-C-----CCCCCSEEEEEECTTSSEEEEEETTSEE
T ss_pred ccCCCcceEEeeeEc-C--CCeEEEEECCCceEEEEECCCCCceE-e-----cCCccceeeeEECCCCCEEEEECCCCeE
Confidence 556777 89999999 8 99999999888888 88987654211 1 1224678999999999998754 7
Q ss_pred EEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCC----------CeEEEEEccCCcccceeeeeeecCceecEE
Q psy13207 94 IMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSD----------QNIKVTRDVMGTRFDIETIGNFEDHYCTVW 157 (197)
Q Consensus 94 ~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d----------~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~ 157 (197)
++|+ ..... .|...+..++|+|+.-+|++++.+ +.|++||+.+ .+ ...+..|...+.
T Consensus 403 ~~~d~~tg~~~~~~~-~~~~~v~~~~~SpDG~~la~~~~~~~~~~~~~~~~~i~l~d~~~-----g~-~~~l~~~~~~~~ 475 (1045)
T 1k32_A 403 MTVDLETGKPTVIER-SREAMITDFTISDNSRFIAYGFPLKHGETDGYVMQAIHVYDMEG-----RK-IFAATTENSHDY 475 (1045)
T ss_dssp EEEETTTCCEEEEEE-CSSSCCCCEEECTTSCEEEEEEEECSSTTCSCCEEEEEEEETTT-----TE-EEECSCSSSBEE
T ss_pred EEEECCCCceEEecc-CCCCCccceEECCCCCeEEEEecCccccccCCCCCeEEEEECCC-----Cc-EEEeeCCCcccC
Confidence 8999 23333 688889999999554333666654 4899999975 33 556777888889
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 158 RVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 158 ~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
.++|+|||++|+.++.++...+|+...
T Consensus 476 ~~~~spdG~~l~~~s~~~~~~~~~~~~ 502 (1045)
T 1k32_A 476 APAFDADSKNLYYLSYRSLDPSPDRVV 502 (1045)
T ss_dssp EEEECTTSCEEEEEESCCCCCEECSSS
T ss_pred CceEcCCCCEEEEEecccCCcCcchhc
Confidence 999999999999999988888887543
No 158
>1pby_B Quinohemoprotein amine dehydrogenase 40 kDa subunit; oxidoreductase; HET: TRW HEM; 1.70A {Paracoccus denitrificans} SCOP: b.69.2.2 PDB: 1jju_B*
Probab=99.35 E-value=2.7e-11 Score=88.65 Aligned_cols=135 Identities=7% Similarity=-0.021 Sum_probs=94.3
Q ss_pred cEEEEEeCCCcEEEEEcCCcccccceeccceeccCC---CeeeEEEccCCCcccce------eEEEE------eeEeccc
Q psy13207 40 LVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPT---LASCLTWNHSFSRFNSI------SIMYE------AHSINAE 104 (197)
Q Consensus 40 ~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~------~~~~~------~~~~~~~ 104 (197)
++|++++.++.|.+||+.+++.+..+. ... .+..++|+|+++.++.+ +.+|| +..+...
T Consensus 2 ~~~v~~~~~~~v~~~d~~~~~~~~~~~------~~~~~~~~~~~~~s~dg~~l~v~~~~~~~v~~~d~~~~~~~~~~~~~ 75 (337)
T 1pby_B 2 DYILAPARPDKLVVIDTEKMAVDKVIT------IADAGPTPMVPMVAPGGRIAYATVNKSESLVKIDLVTGETLGRIDLS 75 (337)
T ss_dssp EEEEEEETTTEEEEEETTTTEEEEEEE------CTTCTTCCCCEEECTTSSEEEEEETTTTEEEEEETTTCCEEEEEECC
T ss_pred cEEEEcCCCCeEEEEECCCCcEEEEEE------cCCCCCCccceEEcCCCCEEEEEeCCCCeEEEEECCCCCeEeeEEcC
Confidence 478999999999999998876543332 122 47889999999865332 78888 2333311
Q ss_pred C----CCceeEEEEcCCCeEEEEee------------CCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEE
Q psy13207 105 H----KDLIHDVAYDYYGLRMATCS------------SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIV 168 (197)
Q Consensus 105 ~----~~~i~~~~~~~~~~~~~s~~------------~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 168 (197)
+ ...+..++|+++.-++++++ .++.|.+||..+ .+.+..+.. ...+.+++|+|+|++|
T Consensus 76 ~~~~~~~~~~~~~~s~dg~~l~~~~~~~~~~~~~~~~~~~~i~v~d~~~-----~~~~~~~~~-~~~~~~~~~s~dg~~l 149 (337)
T 1pby_B 76 TPEERVKSLFGAALSPDGKTLAIYESPVRLELTHFEVQPTRVALYDAET-----LSRRKAFEA-PRQITMLAWARDGSKL 149 (337)
T ss_dssp BTTEEEECTTCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEETTT-----TEEEEEEEC-CSSCCCEEECTTSSCE
T ss_pred CcccccccccceEECCCCCEEEEEecccccccccccccCceEEEEECCC-----CcEEEEEeC-CCCcceeEECCCCCEE
Confidence 1 22677899994432225554 579999999976 344444433 3456789999999988
Q ss_pred EEEeCCCcEEEEEcCCCcch
Q psy13207 169 ASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 169 ~~~~~dg~i~iw~~~~~~~~ 188 (197)
+++ ++.|.+||+.+++..
T Consensus 150 ~~~--~~~i~~~d~~~~~~~ 167 (337)
T 1pby_B 150 YGL--GRDLHVMDPEAGTLV 167 (337)
T ss_dssp EEE--SSSEEEEETTTTEEE
T ss_pred EEe--CCeEEEEECCCCcEe
Confidence 887 689999999877654
No 159
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.34 E-value=2.9e-11 Score=98.26 Aligned_cols=138 Identities=9% Similarity=-0.002 Sum_probs=90.0
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeeeEEEccCCCccccee----------
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASCLTWNHSFSRFNSIS---------- 93 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~---------- 93 (197)
......+.|+|+ |++++++ |++|++||+.+++....+.. +.... ......+.|+|++++++.+.
T Consensus 16 ~~~~~~~~w~~d--g~~~~~~--~~~i~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~Spdg~~l~~~~~~~~~~r~~~ 90 (740)
T 4a5s_A 16 RLKLYSLRWISD--HEYLYKQ--ENNILVFNAEYGNSSVFLEN-STFDEFGHSINDYSISPDGQFILLEYNYVKQWRHSY 90 (740)
T ss_dssp CCCCCCEEECSS--SEEEEEE--TTEEEEEETTTCCEEEEECT-TTTTTCCSCCCEEEECTTSSEEEEEEEEEECSSSCE
T ss_pred cccccccEECCC--CcEEEEc--CCcEEEEECCCCceEEEEec-hhhhhhcccccceEECCCCCEEEEEECCeeeEEEcc
Confidence 344678999999 9988886 99999999998864322211 11110 11234589999999876553
Q ss_pred ----EEEE-----eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeee-eecCceecE-------
Q psy13207 94 ----IMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIG-NFEDHYCTV------- 156 (197)
Q Consensus 94 ----~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~-~~~~h~~~v------- 156 (197)
.+|| +..+. .+...+...+|+|+.-.|+.+ .|+.|++|+..++. ... ...++...+
T Consensus 91 ~~~~~~~d~~~~~~~~l~-~~~~~~~~~~~SPdG~~la~~-~~~~i~~~~~~~~~-----~~~lt~~g~~~~~~~g~~~~ 163 (740)
T 4a5s_A 91 TASYDIYDLNKRQLITEE-RIPNNTQWVTWSPVGHKLAYV-WNNDIYVKIEPNLP-----SYRITWTGKEDIIYNGITDW 163 (740)
T ss_dssp EEEEEEEETTTTEECCSS-CCCTTEEEEEECSSTTCEEEE-ETTEEEEESSTTSC-----CEECCSCCBTTTEEESBCCH
T ss_pred ceEEEEEECCCCcEEEcc-cCCCcceeeEECCCCCEEEEE-ECCeEEEEECCCCc-----eEEEcCCCCccceecCcccc
Confidence 4888 33444 567789999999443222666 57899999987632 111 112222222
Q ss_pred ----------EEEEEccCCCEEEEEeCC
Q psy13207 157 ----------WRVSWNITGTIVASSGDD 174 (197)
Q Consensus 157 ----------~~~~~~p~~~~l~~~~~d 174 (197)
..+.|||||++||.++.|
T Consensus 164 v~~ee~~~~~~~~~wSpDg~~la~~~~d 191 (740)
T 4a5s_A 164 VYEEEVFSAYSALWWSPNGTFLAYAQFN 191 (740)
T ss_dssp HHHHHTSSSSBCEEECTTSSEEEEEEEE
T ss_pred cccchhcCCCcceEECCCCCEEEEEEEc
Confidence 348999999999988644
No 160
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta propeller, hydrolase, oligop SIZE selectivity; HET: GOL; 1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A* 1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Probab=99.34 E-value=6.4e-11 Score=93.55 Aligned_cols=161 Identities=10% Similarity=-0.007 Sum_probs=108.8
Q ss_pred cccccceeeeee----eecCCC-cceeEEEECCCCCCcEEEEEeC---CCcEEEEEcCC--cccccceeccceeccCCCe
Q psy13207 8 SEKCLNQWTRRS----NLVDSR-TSVTDVKFGPKQLGLVLATCAA---DGLVRIYEAPD--VMNLSQWCLQHEVACPTLA 77 (197)
Q Consensus 8 ~~~~~~~w~~~~----~~~~h~-~~v~~~~~~~~~~~~~l~s~~~---dg~v~iw~~~~--~~~~~~~~~~~~~~~~~~~ 77 (197)
.++++++|.+.. .+..|. ..+..+.|+|+ +.+++++. +....||.+.. ..... .+......
T Consensus 42 ~~g~~~lw~~~~g~~~~lt~~~~~~~~~~~~spd---~~l~~~~~~~g~~~~~l~~~~~~~~g~~~------~l~~~~~~ 112 (582)
T 3o4h_A 42 SEGSVNAYLYDGGETVKLNREPINSVLDPHYGVG---RVILVRDVSKGAEQHALFKVNTSRPGEEQ------RLEAVKPM 112 (582)
T ss_dssp ETTEEEEEEEETTEEEECCSSCCSEECEECTTCS---EEEEEEECSTTSCCEEEEEEETTSTTCCE------ECTTSCSB
T ss_pred cCCceeEEEEcCCCcEeeecccccccccccCCCC---eEEEEeccCCCCcceEEEEEeccCCCccc------cccCCCCc
Confidence 377889998742 355555 68999999985 46776664 55667766544 22111 11112344
Q ss_pred eeEEEccCCCcc--cce----eEEEE-----eeEecccCCCceeEEEEc--CCCeEEEEeeCC----CeEEEEEccCCcc
Q psy13207 78 SCLTWNHSFSRF--NSI----SIMYE-----AHSINAEHKDLIHDVAYD--YYGLRMATCSSD----QNIKVTRDVMGTR 140 (197)
Q Consensus 78 ~~~~~~~~~~~~--~~~----~~~~~-----~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d----~~i~~~d~~~~~~ 140 (197)
...+|+|+++.+ ++. ..+|+ ...+. .+.. .+++|+ ++.+ ++++.+ ..|++||+.+
T Consensus 113 ~~~~~s~dg~~~~~~s~~~~~~~l~d~~~g~~~~l~-~~~~--~~~~~spDG~~l--a~~~~~~~~~~~i~~~d~~~--- 184 (582)
T 3o4h_A 113 RILSGVDTGEAVVFTGATEDRVALYALDGGGLRELA-RLPG--FGFVSDIRGDLI--AGLGFFGGGRVSLFTSNLSS--- 184 (582)
T ss_dssp EEEEEEECSSCEEEEEECSSCEEEEEEETTEEEEEE-EESS--CEEEEEEETTEE--EEEEEEETTEEEEEEEETTT---
T ss_pred eeeeeCCCCCeEEEEecCCCCceEEEccCCcEEEee-cCCC--ceEEECCCCCEE--EEEEEcCCCCeEEEEEcCCC---
Confidence 567889988753 222 56888 22333 2222 788898 5555 877766 7899999875
Q ss_pred cceeeeeeecCceecEEEEEEccCCCEEEEEeCCC--cEEEEEcCCCcch
Q psy13207 141 FDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG--CVRLWKLKKKRKK 188 (197)
Q Consensus 141 ~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg--~i~iw~~~~~~~~ 188 (197)
++ ...+..|...+..++|+|||++|+++..++ .|++||+.+++..
T Consensus 185 --g~-~~~l~~~~~~~~~~~~SpDG~~l~~~~~~~~~~i~~~d~~~~~~~ 231 (582)
T 3o4h_A 185 --GG-LRVFDSGEGSFSSASISPGMKVTAGLETAREARLVTVDPRDGSVE 231 (582)
T ss_dssp --CC-CEEECCSSCEEEEEEECTTSCEEEEEECSSCEEEEEECTTTCCEE
T ss_pred --CC-ceEeecCCCccccceECCCCCEEEEccCCCeeEEEEEcCCCCcEE
Confidence 22 335667888899999999999999888888 8999999876543
No 161
>1jmx_B Amine dehydrogenase; oxidoreductase; HET: TRQ HEC; 1.90A {Pseudomonas putida} SCOP: b.69.2.2 PDB: 1jmz_B*
Probab=99.33 E-value=1.7e-11 Score=90.25 Aligned_cols=149 Identities=7% Similarity=-0.025 Sum_probs=97.5
Q ss_pred EEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce------eEEEE------
Q psy13207 30 DVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------SIMYE------ 97 (197)
Q Consensus 30 ~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~------ 97 (197)
.++++++ +.++++++.+++|.+||+.+++.+..+... ....+..++|+|+++.++.+ +.+|+
T Consensus 4 g~~~~~~--~~~~v~~~~~~~v~~~d~~~~~~~~~~~~~----~~~~~~~~~~s~dg~~~~v~~~~~~~i~~~d~~t~~~ 77 (349)
T 1jmx_B 4 GPALKAG--HEYMIVTNYPNNLHVVDVASDTVYKSCVMP----DKFGPGTAMMAPDNRTAYVLNNHYGDIYGIDLDTCKN 77 (349)
T ss_dssp CCCCCTT--CEEEEEEETTTEEEEEETTTTEEEEEEECS----SCCSSCEEEECTTSSEEEEEETTTTEEEEEETTTTEE
T ss_pred cccccCC--CEEEEEeCCCCeEEEEECCCCcEEEEEecC----CCCCCceeEECCCCCEEEEEeCCCCcEEEEeCCCCcE
Confidence 4557776 889999999999999999887654333221 11257889999999865322 78888
Q ss_pred eeEecccC-----CCceeEEEEcCCCeEEEEeeCC------------CeEEEEEccCCcccceeeeeeecCceecEEEEE
Q psy13207 98 AHSINAEH-----KDLIHDVAYDYYGLRMATCSSD------------QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160 (197)
Q Consensus 98 ~~~~~~~~-----~~~i~~~~~~~~~~~~~s~~~d------------~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~ 160 (197)
+..+...+ ...+..++|+++.-++++++.+ +.|.+||+.+... ...+..+.. ...+.+++
T Consensus 78 ~~~~~~~~~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~~~~~~~~i~~~d~~~~~~--~~~~~~~~~-~~~~~~~~ 154 (349)
T 1jmx_B 78 TFHANLSSVPGEVGRSMYSFAISPDGKEVYATVNPTQRLNDHYVVKPPRLEVFSTADGLE--AKPVRTFPM-PRQVYLMR 154 (349)
T ss_dssp EEEEESCCSTTEEEECSSCEEECTTSSEEEEEEEEEEECSSCEEECCCEEEEEEGGGGGG--BCCSEEEEC-CSSCCCEE
T ss_pred EEEEEcccccccccccccceEECCCCCEEEEEcccccccccccccCCCeEEEEECCCccc--cceeeeccC-CCccccee
Confidence 22333111 2237889999443333777654 8999999975211 112222222 33578899
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 161 WNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 161 ~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
|+|+|+ ++.++ +.|.+||+.+++....
T Consensus 155 ~s~dg~-l~~~~--~~i~~~d~~~~~~~~~ 181 (349)
T 1jmx_B 155 AADDGS-LYVAG--PDIYKMDVKTGKYTVA 181 (349)
T ss_dssp ECTTSC-EEEES--SSEEEECTTTCCEEEE
T ss_pred ECCCCc-EEEcc--CcEEEEeCCCCceecc
Confidence 999999 55554 3499999988765443
No 162
>1z68_A Fibroblast activation protein, alpha subunit; seprase, fibroblast activation protein alpha,fapalpha, dipeptidylpeptidase,S9B; HET: NAG NDG; 2.60A {Homo sapiens}
Probab=99.29 E-value=3.1e-11 Score=97.56 Aligned_cols=134 Identities=13% Similarity=0.111 Sum_probs=86.1
Q ss_pred eEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce--------------eE
Q psy13207 29 TDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--------------SI 94 (197)
Q Consensus 29 ~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------------~~ 94 (197)
..+.|+|+ |+++++ +.|++|++||+.+++........ .. ....+.+++|+|+|++++.+ ++
T Consensus 19 ~~~~~s~d--g~~~~~-~~d~~i~~~~~~~g~~~~~~~~~-~~-~~~~~~~~~~SpDg~~la~~~~~~~~~~~s~~~~i~ 93 (719)
T 1z68_A 19 FFPNWISG--QEYLHQ-SADNNIVLYNIETGQSYTILSNR-TM-KSVNASNYGLSPDRQFVYLESDYSKLWRYSYTATYY 93 (719)
T ss_dssp CCCEESSS--SEEEEE-CTTSCEEEEESSSCCEEEEECHH-HH-HTTTCSEEEECTTSSEEEEEEEEEECSSSCEEEEEE
T ss_pred CccEECCC--CeEEEE-cCCCCEEEEEcCCCcEEEEEccc-cc-cccceeeEEECCCCCeEEEEecCceeEEeecceEEE
Confidence 37899999 865555 46999999999887643222110 00 01248899999999987532 56
Q ss_pred EEEee--Ee---cccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeee-ecCceecE------------
Q psy13207 95 MYEAH--SI---NAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN-FEDHYCTV------------ 156 (197)
Q Consensus 95 ~~~~~--~~---~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~-~~~h~~~v------------ 156 (197)
+|++. .. . .....+..++|+|+.-.|+.+. ++.|++||+.++ ..... ..++...|
T Consensus 94 ~~d~~~g~~~~~~-~l~~~~~~~~~SPDG~~la~~~-~~~i~~~~~~~g-----~~~~l~~~~~~~~v~~g~~~~v~~ee 166 (719)
T 1z68_A 94 IYDLSNGEFVRGN-ELPRPIQYLCWSPVGSKLAYVY-QNNIYLKQRPGD-----PPFQITFNGRENKIFNGIPDWVYEEE 166 (719)
T ss_dssp EEETTTTEECCSS-CCCSSBCCEEECSSTTCEEEEE-TTEEEEESSTTS-----CCEECCCCCBTTTEEESSCCHHHHHH
T ss_pred EEECCCCccccce-ecCcccccceECCCCCEEEEEE-CCeEEEEeCCCC-----CcEEEecCCCcCCeEcccccceeeee
Confidence 77721 11 1 2235688899994432226664 789999999763 22111 12222222
Q ss_pred -----EEEEEccCCCEEEEEeCC
Q psy13207 157 -----WRVSWNITGTIVASSGDD 174 (197)
Q Consensus 157 -----~~~~~~p~~~~l~~~~~d 174 (197)
.+++|+|||++|++++.|
T Consensus 167 ~~~~~~~~~wSPDG~~la~~~~d 189 (719)
T 1z68_A 167 MLATKYALWWSPNGKFLAYAEFN 189 (719)
T ss_dssp TTCSSCCEEECTTSSEEEEEEEE
T ss_pred cccCcccEEECCCCCEEEEEEEC
Confidence 489999999999998865
No 163
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.26 E-value=1.5e-09 Score=78.01 Aligned_cols=150 Identities=13% Similarity=0.119 Sum_probs=101.7
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE-
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE- 97 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~- 97 (197)
+...+.+++++|+ |+++++...++.|.+|+... +....+... .....+..++++++++.+++. +.+|+
T Consensus 119 ~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~~~g-~~~~~~~~~---~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~ 192 (286)
T 1q7f_A 119 ILQHPRGVTVDNK--GRIIVVECKVMRVIIFDQNG-NVLHKFGCS---KHLEFPNGVVVNDKQEIFISDNRAHCVKVFNY 192 (286)
T ss_dssp TCSCEEEEEECTT--SCEEEEETTTTEEEEECTTS-CEEEEEECT---TTCSSEEEEEECSSSEEEEEEGGGTEEEEEET
T ss_pred cCCCceEEEEeCC--CCEEEEECCCCEEEEEcCCC-CEEEEeCCC---CccCCcEEEEECCCCCEEEEECCCCEEEEEcC
Confidence 4456899999998 88888888889999999643 222222110 113457899999999876543 78888
Q ss_pred ----eeEecc-cCCCceeEEEEcCCCeEEEEeeCCC-eEEEEEccCCcccceeeeeeecCc--eecEEEEEEccCCCEEE
Q psy13207 98 ----AHSINA-EHKDLIHDVAYDYYGLRMATCSSDQ-NIKVTRDVMGTRFDIETIGNFEDH--YCTVWRVSWNITGTIVA 169 (197)
Q Consensus 98 ----~~~~~~-~~~~~i~~~~~~~~~~~~~s~~~d~-~i~~~d~~~~~~~~~~~~~~~~~h--~~~v~~~~~~p~~~~l~ 169 (197)
+..+.. ++...+..++++++.-++++...++ .|.+||.. ...+..+..+ ...+.+++++|+|++++
T Consensus 193 ~g~~~~~~~~~g~~~~p~~i~~d~~G~l~v~~~~~~~~i~~~~~~------g~~~~~~~~~~~~~~~~~i~~~~~g~l~v 266 (286)
T 1q7f_A 193 EGQYLRQIGGEGITNYPIGVGINSNGEILIADNHNNFNLTIFTQD------GQLISALESKVKHAQCFDVALMDDGSVVL 266 (286)
T ss_dssp TCCEEEEESCTTTSCSEEEEEECTTCCEEEEECSSSCEEEEECTT------SCEEEEEEESSCCSCEEEEEEETTTEEEE
T ss_pred CCCEEEEEccCCccCCCcEEEECCCCCEEEEeCCCCEEEEEECCC------CCEEEEEcccCCCCcceeEEECCCCcEEE
Confidence 344431 2235788999983332236666675 99999964 3334444333 23478999999998777
Q ss_pred EEeCCCcEEEEEcCCCc
Q psy13207 170 SSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 170 ~~~~dg~i~iw~~~~~~ 186 (197)
+ +.|++|++|++....
T Consensus 267 s-~~~~~v~v~~~~~~~ 282 (286)
T 1q7f_A 267 A-SKDYRLYIYRYVQLA 282 (286)
T ss_dssp E-ETTTEEEEEECSCCC
T ss_pred E-CCCCeEEEEEccccc
Confidence 7 579999999986543
No 164
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.23 E-value=7.7e-10 Score=82.55 Aligned_cols=149 Identities=9% Similarity=0.094 Sum_probs=97.9
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcC-CcccccceeccceeccCCCeeeEEEccCCCc--ccc----------
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAP-DVMNLSQWCLQHEVACPTLASCLTWNHSFSR--FNS---------- 91 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~---------- 91 (197)
...+..++|+|+ |++|++++.+ .|.+|++. +++..... ..........++|+|++++ +++
T Consensus 39 ~~~~~~~a~spd--g~~l~~~~~~-~v~~~~~~~~g~~~~~~----~~~~~g~~~~~~~spdg~~l~~~~~~~~~~~~~~ 111 (365)
T 1jof_A 39 DEPISWMTFDHE--RKNIYGAAMK-KWSSFAVKSPTEIVHEA----SHPIGGHPRANDADTNTRAIFLLAAKQPPYAVYA 111 (365)
T ss_dssp TCCCSEEEECTT--SSEEEEEEBT-EEEEEEEEETTEEEEEE----EEECCSSGGGGCTTSCCEEEEEEECSSTTCCEEE
T ss_pred CCCCcEEEECCC--CCEEEEEccc-eEEEEEECCCCCEEEee----EeecCCCCccEEECCCCCEEEEEEecCCcceecc
Confidence 346888999999 9999999888 99999986 55432111 1111123566889999984 311
Q ss_pred --------eeEEEEee-------Eecc---cCCCceeEEEEcCCCeEEEEee-CCCeEEEEEcc-CCcccceeeeeeec-
Q psy13207 92 --------ISIMYEAH-------SINA---EHKDLIHDVAYDYYGLRMATCS-SDQNIKVTRDV-MGTRFDIETIGNFE- 150 (197)
Q Consensus 92 --------~~~~~~~~-------~~~~---~~~~~i~~~~~~~~~~~~~s~~-~d~~i~~~d~~-~~~~~~~~~~~~~~- 150 (197)
.+.+|++. .+.. .+...+.+++|+++.-++++++ .++.|++||+. +++ ...+..+.
T Consensus 112 ~~~~~~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spdG~~l~~~~~~~~~v~~~~~~~~g~---~~~~~~~~~ 188 (365)
T 1jof_A 112 NPFYKFAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPTETYLYSADLTANKLWTHRKLASGE---VELVGSVDA 188 (365)
T ss_dssp EEESSSCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTSC---EEEEEEEEC
T ss_pred ceeecCCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCCCCEEEEEcCCCCEEEEEEECCCCC---EEEeeeEec
Confidence 26788721 1210 1456789999995442225554 46899999997 421 12222332
Q ss_pred -CceecEEEEEEccCCCEEEEEeC-CCcEEEEEcC
Q psy13207 151 -DHYCTVWRVSWNITGTIVASSGD-DGCVRLWKLK 183 (197)
Q Consensus 151 -~h~~~v~~~~~~p~~~~l~~~~~-dg~i~iw~~~ 183 (197)
.|...+..++|+|+|+++++++. ++.|.+|+++
T Consensus 189 ~~~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~ 223 (365)
T 1jof_A 189 PDPGDHPRWVAMHPTGNYLYALMEAGNRICEYVID 223 (365)
T ss_dssp SSTTCCEEEEEECTTSSEEEEEETTTTEEEEEEEC
T ss_pred CCCCCCCCEeEECCCCCEEEEEECCCCeEEEEEEe
Confidence 23456899999999999988774 7899999875
No 165
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.23 E-value=1.8e-09 Score=79.45 Aligned_cols=155 Identities=10% Similarity=0.077 Sum_probs=106.8
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCC------------------------CcEEEEEcCCcccccceeccceeccCCCeee
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAAD------------------------GLVRIYEAPDVMNLSQWCLQHEVACPTLASC 79 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~d------------------------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~ 79 (197)
.-+.+.+++++|+ |+++++...+ ++|.+||..+++.+..+.. ..-.....
T Consensus 22 ~l~~v~~va~d~~--G~l~v~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~d~~~g~~~~~~~~----~~~~~p~g 95 (329)
T 3fvz_A 22 LPGQVSGVALDSK--NNLVIFHRGDHVWDGNSFDSKFVYQQRGLGPIEEDTILVIDPNNAEILQSSGK----NLFYLPHG 95 (329)
T ss_dssp CCSCEEEEEECTT--CCEEEEECTTCCCCTTSBCTTSCBSCGGGCSCCSCCEEEECTTTCCEEEEECT----TTCSSEEE
T ss_pred ecCCceEEEECCC--CCEEEEeCCCCeEEeeccCcceeecccccccccCCcEEEEECCCCeEEeccCC----CccCCceE
Confidence 3467999999998 9999888877 4799999887764322210 01246788
Q ss_pred EEEccCCCcccce-----eEEEE-------eeEec--------ccCCCceeEEEEcC-CCeEEEEee-CCCeEEEEEccC
Q psy13207 80 LTWNHSFSRFNSI-----SIMYE-------AHSIN--------AEHKDLIHDVAYDY-YGLRMATCS-SDQNIKVTRDVM 137 (197)
Q Consensus 80 ~~~~~~~~~~~~~-----~~~~~-------~~~~~--------~~~~~~i~~~~~~~-~~~~~~s~~-~d~~i~~~d~~~ 137 (197)
++++++++.+++. +..|+ +..+. ..+......+++++ +..++++.+ .++.|++||..
T Consensus 96 ia~d~~g~l~v~d~~~~~v~~~~~~g~~~~~~~~~~~~~~g~~~~~~~~P~~ia~~~~~g~lyv~d~~~~~~I~~~~~~- 174 (329)
T 3fvz_A 96 LSIDTDGNYWVTDVALHQVFKLDPHSKEGPLLILGRSMQPGSDQNHFCQPTDVAVEPSTGAVFVSDGYCNSRIVQFSPS- 174 (329)
T ss_dssp EEECTTSCEEEEETTTTEEEEECTTCSSCCSEEESBTTBCCCSTTCCSSEEEEEECTTTCCEEEEECSSCCEEEEECTT-
T ss_pred EEECCCCCEEEEECCCCEEEEEeCCCCeEEEEEecccCCCCCCccccCCCcEEEEeCCCCeEEEEeCCCCCeEEEEcCC-
Confidence 9999999876543 67777 22221 13344678999985 444446665 68999999954
Q ss_pred Ccccceeeeeeec----------CceecEEEEEEccC-CCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 138 GTRFDIETIGNFE----------DHYCTVWRVSWNIT-GTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 138 ~~~~~~~~~~~~~----------~h~~~v~~~~~~p~-~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
+..+..+. ++......++++|+ ++++++...++.|++|+..+++....
T Consensus 175 -----g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~~~~I~~~~~~~G~~~~~ 233 (329)
T 3fvz_A 175 -----GKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRENGRIQCFKTDTKEFVRE 233 (329)
T ss_dssp -----SCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETTTTEEEEEETTTCCEEEE
T ss_pred -----CCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECCCCEEEEEECCCCcEEEE
Confidence 33444432 23345789999998 78888888899999999986554433
No 166
>1jof_A Carboxy-CIS,CIS-muconate cyclase; beta-propeller, homotetramer, seMet-protein, isomerase; HET: PIN; 2.50A {Neurospora crassa} SCOP: b.69.10.1
Probab=99.22 E-value=9.7e-10 Score=81.99 Aligned_cols=168 Identities=11% Similarity=0.030 Sum_probs=106.7
Q ss_pred cccccceeeeee------eec----CCCcceeEEEECCCCCCcEEEEEe-CCCcEEEEEcC-Ccccccceeccceec---
Q psy13207 8 SEKCLNQWTRRS------NLV----DSRTSVTDVKFGPKQLGLVLATCA-ADGLVRIYEAP-DVMNLSQWCLQHEVA--- 72 (197)
Q Consensus 8 ~~~~~~~w~~~~------~~~----~h~~~v~~~~~~~~~~~~~l~s~~-~dg~v~iw~~~-~~~~~~~~~~~~~~~--- 72 (197)
.++++.+|++.. .+. .+...+.++.|+|+ |++|++++ .++.|.+|++. +++... ...+.
T Consensus 117 ~~g~v~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~~spd--G~~l~~~~~~~~~v~~~~~~~~g~~~~----~~~~~~~~ 190 (365)
T 1jof_A 117 FAGYGNVFSVSETGKLEKNVQNYEYQENTGIHGMVFDPT--ETYLYSADLTANKLWTHRKLASGEVEL----VGSVDAPD 190 (365)
T ss_dssp SCCEEEEEEECTTCCEEEEEEEEECCTTCCEEEEEECTT--SSEEEEEETTTTEEEEEEECTTSCEEE----EEEEECSS
T ss_pred CCceEEEEccCCCCcCcceEeeEEeCCCCcceEEEECCC--CCEEEEEcCCCCEEEEEEECCCCCEEE----eeeEecCC
Confidence 466778887641 122 24567899999999 88777765 46899999998 553211 11121
Q ss_pred cCCCeeeEEEccCCCcccce------eEEEEee-----------Eecc------cCCC------ceeEEE-EcCCCeEEE
Q psy13207 73 CPTLASCLTWNHSFSRFNSI------SIMYEAH-----------SINA------EHKD------LIHDVA-YDYYGLRMA 122 (197)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~------~~~~~~~-----------~~~~------~~~~------~i~~~~-~~~~~~~~~ 122 (197)
....+..++|+|++++++.+ +.+|++. .+.. +|.. .+..++ |+++.-+|+
T Consensus 191 ~g~~p~~~~~spdg~~l~v~~~~~~~v~v~~~~~~~g~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~i~~~spdG~~l~ 270 (365)
T 1jof_A 191 PGDHPRWVAMHPTGNYLYALMEAGNRICEYVIDPATHMPVYTHHSFPLIPPGIPDRDPETGKGLYRADVCALTFSGKYMF 270 (365)
T ss_dssp TTCCEEEEEECTTSSEEEEEETTTTEEEEEEECTTTCCEEEEEEEEESSCTTCCCBCTTTSSBSEEEEEEEECTTSSEEE
T ss_pred CCCCCCEeEECCCCCEEEEEECCCCeEEEEEEeCCCCcEEEccceEEcCCCCcCCcccccccccccccEEEECCCCCEEE
Confidence 14568899999999886432 6777521 1110 1121 578899 994432225
Q ss_pred EeeC-CC-----eEEEEEccCCcccceeeee---eecCceecEEEEEEcc---CCCEEEEEeCC-CcEEEEEcCCC
Q psy13207 123 TCSS-DQ-----NIKVTRDVMGTRFDIETIG---NFEDHYCTVWRVSWNI---TGTIVASSGDD-GCVRLWKLKKK 185 (197)
Q Consensus 123 s~~~-d~-----~i~~~d~~~~~~~~~~~~~---~~~~h~~~v~~~~~~p---~~~~l~~~~~d-g~i~iw~~~~~ 185 (197)
+++. ++ .|.+|++... ++... ....+...+..++|+| +|++|++++.+ +.|.+|+++..
T Consensus 271 v~~~~~~~~~~~~i~v~~~~~~----g~~~~~~~~~~~~~~~~~~~a~sp~~~dg~~l~v~~~~~~~v~v~~~~~~ 342 (365)
T 1jof_A 271 ASSRANKFELQGYIAGFKLRDC----GSIEKQLFLSPTPTSGGHSNAVSPCPWSDEWMAITDDQEGWLEIYRWKDE 342 (365)
T ss_dssp EEEEESSTTSCCEEEEEEECTT----SCEEEEEEEEECSSCCTTCCCEEECTTCTTEEEEECSSSCEEEEEEEETT
T ss_pred EECCCCCCCCCCeEEEEEECCC----CCEEEeeeeeecCCCCcccceecCCCcCCCEEEEEEcCCCeEEEEEEchh
Confidence 5443 23 8999998521 22221 1223344456789999 89999998864 89999998754
No 167
>4a5s_A Dipeptidyl peptidase 4 soluble form; hydrolase, type 2 diabetes, novartis compound NVP-BIV988; HET: N7F NAG MAN; 1.62A {Homo sapiens} PDB: 2qjr_A* 3f8s_A* 2qt9_A* 2qtb_A* 2rip_A* 1tk3_A* 1n1m_A* 1nu8_A* 1rwq_A* 1nu6_A* 1tkr_A* 1w1i_A* 2ajl_I* 2bgn_A* 2bub_A* 2ogz_A* 2ole_A* 2oqi_A* 3bjm_A* 3eio_A* ...
Probab=99.18 E-value=4.9e-10 Score=91.08 Aligned_cols=167 Identities=13% Similarity=0.106 Sum_probs=105.6
Q ss_pred ccccceeeee-----eeecCCCcc-----eeEEEECCCCCCcEEEEEeCC---------CcEEEEEcCCcccccceeccc
Q psy13207 9 EKCLNQWTRR-----SNLVDSRTS-----VTDVKFGPKQLGLVLATCAAD---------GLVRIYEAPDVMNLSQWCLQH 69 (197)
Q Consensus 9 ~~~~~~w~~~-----~~~~~h~~~-----v~~~~~~~~~~~~~l~s~~~d---------g~v~iw~~~~~~~~~~~~~~~ 69 (197)
++++++|++. ..+.+|... ...+.|||+ |+.|+.++.+ +.+.+||+.+++... +
T Consensus 35 ~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~Spd--g~~l~~~~~~~~~~r~~~~~~~~~~d~~~~~~~~-l---- 107 (740)
T 4a5s_A 35 ENNILVFNAEYGNSSVFLENSTFDEFGHSINDYSISPD--GQFILLEYNYVKQWRHSYTASYDIYDLNKRQLIT-E---- 107 (740)
T ss_dssp TTEEEEEETTTCCEEEEECTTTTTTCCSCCCEEEECTT--SSEEEEEEEEEECSSSCEEEEEEEEETTTTEECC-S----
T ss_pred CCcEEEEECCCCceEEEEechhhhhhcccccceEECCC--CCEEEEEECCeeeEEEccceEEEEEECCCCcEEE-c----
Confidence 6788899753 235555532 244789999 9999988876 566799999875331 1
Q ss_pred eeccCCCeeeEEEccCCCcccce----eEEEE-----eeEec-ccCCCce-----------------eEEEEcCCCeEEE
Q psy13207 70 EVACPTLASCLTWNHSFSRFNSI----SIMYE-----AHSIN-AEHKDLI-----------------HDVAYDYYGLRMA 122 (197)
Q Consensus 70 ~~~~~~~~~~~~~~~~~~~~~~~----~~~~~-----~~~~~-~~~~~~i-----------------~~~~~~~~~~~~~ 122 (197)
......+...+|+|+|+.++.. +++|+ ...+. .++...+ ..+.|+|+.-.|+
T Consensus 108 -~~~~~~~~~~~~SPdG~~la~~~~~~i~~~~~~~~~~~~lt~~g~~~~~~~g~~~~v~~ee~~~~~~~~~wSpDg~~la 186 (740)
T 4a5s_A 108 -ERIPNNTQWVTWSPVGHKLAYVWNNDIYVKIEPNLPSYRITWTGKEDIIYNGITDWVYEEEVFSAYSALWWSPNGTFLA 186 (740)
T ss_dssp -SCCCTTEEEEEECSSTTCEEEEETTEEEEESSTTSCCEECCSCCBTTTEEESBCCHHHHHHTSSSSBCEEECTTSSEEE
T ss_pred -ccCCCcceeeEECCCCCEEEEEECCeEEEEECCCCceEEEcCCCCccceecCcccccccchhcCCCcceEECCCCCEEE
Confidence 1124568999999999998755 67777 12221 0222212 3488995443336
Q ss_pred EeeCC-C-----------------------------------eEEEEEccC---Ccccceeeeeeec------CceecEE
Q psy13207 123 TCSSD-Q-----------------------------------NIKVTRDVM---GTRFDIETIGNFE------DHYCTVW 157 (197)
Q Consensus 123 s~~~d-~-----------------------------------~i~~~d~~~---~~~~~~~~~~~~~------~h~~~v~ 157 (197)
..+.| + .|++||+.+ +... ....+. +|...+.
T Consensus 187 ~~~~d~~~v~~~~~~~~~~~~~~~~~~~~~~yp~~G~~~~~~~l~v~d~~~~~~~~~~---~~~~l~~~~~~~~~~~~~~ 263 (740)
T 4a5s_A 187 YAQFNDTEVPLIEYSFYSDESLQYPKTVRVPYPKAGAVNPTVKFFVVNTDSLSSVTNA---TSIQITAPASMLIGDHYLC 263 (740)
T ss_dssp EEEEECTTCCEEEEEECCSTTCSSCEEEEEECCBTTSCCCEEEEEEEETTSCCSSSCC---CEEEECCCHHHHTSCEEEE
T ss_pred EEEEcccCCceEEEEeecCCCCCCCcceeecCCCCcCcCCeeEEEEEECCCCCCCCcc---eEEEecCCccCCCCCeEEE
Confidence 55422 1 466777754 3110 111222 3777899
Q ss_pred EEEEccCCCEEEEEeC----CCcEEEEEcCCCc
Q psy13207 158 RVSWNITGTIVASSGD----DGCVRLWKLKKKR 186 (197)
Q Consensus 158 ~~~~~p~~~~l~~~~~----dg~i~iw~~~~~~ 186 (197)
.++|+|||+.++.... +..|.+||+.+++
T Consensus 264 ~~~wspdg~~~~~~~~r~~~~~~i~~~d~~tg~ 296 (740)
T 4a5s_A 264 DVTWATQERISLQWLRRIQNYSVMDICDYDESS 296 (740)
T ss_dssp EEEEEETTEEEEEEEESSTTEEEEEEEEEETTT
T ss_pred EEEEeCCCeEEEEEeCCCCCEEEEEEEECCCCc
Confidence 9999999996665532 3479999998866
No 168
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=99.17 E-value=2.9e-09 Score=79.63 Aligned_cols=152 Identities=7% Similarity=0.020 Sum_probs=97.2
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE--EEccCCCccc--------
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL--TWNHSFSRFN-------- 90 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~-------- 90 (197)
..++...+..+.|+|+ |+.|+.++.++.|++||+.+++....+... ...+... .++|++..++
T Consensus 76 t~~~~~~~~~~~~spd--g~~l~~~~~~~~l~~~d~~~g~~~~~~~~~-----~~~~~~~~~~~~~dg~~l~~~~~~~~~ 148 (388)
T 3pe7_A 76 TEGRGDNTFGGFLSPD--DDALFYVKDGRNLMRVDLATLEENVVYQVP-----AEWVGYGTWVANSDCTKLVGIEIRRED 148 (388)
T ss_dssp CCSSCBCSSSCEECTT--SSEEEEEETTTEEEEEETTTCCEEEEEECC-----TTEEEEEEEEECTTSSEEEEEEEEGGG
T ss_pred eeCCCCCccceEEcCC--CCEEEEEeCCCeEEEEECCCCcceeeeech-----hhcccccceeECCCCCeeccccccCcc
Confidence 3455555667889999 999999999999999999887543222111 1122222 3367776654
Q ss_pred -------------------ceeEEEE-----eeEecccCCCceeEEEEcC-CCeEEEEeeCC------CeEEEEEccCCc
Q psy13207 91 -------------------SISIMYE-----AHSINAEHKDLIHDVAYDY-YGLRMATCSSD------QNIKVTRDVMGT 139 (197)
Q Consensus 91 -------------------~~~~~~~-----~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d------~~i~~~d~~~~~ 139 (197)
..+.+|+ ...+. .+...+..++|+| +.-+++.+..+ ..|.++|...
T Consensus 149 ~~~~~~~~~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~-- 225 (388)
T 3pe7_A 149 WVPLTDWKKFHEFYFTKPCCRLMRVDLKTGESTVIL-QENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDG-- 225 (388)
T ss_dssp CCCCCSHHHHHHHGGGCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTS--
T ss_pred cccccccchhhhhhccCCcceEEEEECCCCceEEee-cCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCC--
Confidence 2366777 34444 4566788999997 65444555543 3677777654
Q ss_pred ccceeeeeeecCce--ecEEEEEEccCCCEEEEEeC-CC----cEEEEEcCCCc
Q psy13207 140 RFDIETIGNFEDHY--CTVWRVSWNITGTIVASSGD-DG----CVRLWKLKKKR 186 (197)
Q Consensus 140 ~~~~~~~~~~~~h~--~~v~~~~~~p~~~~l~~~~~-dg----~i~iw~~~~~~ 186 (197)
.....+..+. ..+..++|+|||+.|+..+. ++ .|++||+.+++
T Consensus 226 ----~~~~~l~~~~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (388)
T 3pe7_A 226 ----TNMRKVKTHAEGESCTHEFWVPDGSALVYVSYLKGSPDRFIYSADPETLE 275 (388)
T ss_dssp ----CCCEESCCCCTTEEEEEEEECTTSSCEEEEEEETTCCCEEEEEECTTTCC
T ss_pred ----CceEEeeeCCCCcccccceECCCCCEEEEEecCCCCCcceEEEEecCCCc
Confidence 2223333333 45788999999997766543 22 39999998765
No 169
>3fvz_A Peptidyl-glycine alpha-amidating monooxygenase; beta propeller, lyase, peptide amidation, HG-MAD, Zn-MAD, CL PAIR of basic residues; 2.35A {Rattus norvegicus} PDB: 3fw0_A*
Probab=99.15 E-value=7e-09 Score=76.30 Aligned_cols=154 Identities=16% Similarity=0.141 Sum_probs=103.3
Q ss_pred CCCcceeEEEECC-CCCCcEEEEEe-CCCcEEEEEcCCcccccceecccee-----ccCCCeeeEEEccC-CCcccce--
Q psy13207 23 DSRTSVTDVKFGP-KQLGLVLATCA-ADGLVRIYEAPDVMNLSQWCLQHEV-----ACPTLASCLTWNHS-FSRFNSI-- 92 (197)
Q Consensus 23 ~h~~~v~~~~~~~-~~~~~~l~s~~-~dg~v~iw~~~~~~~~~~~~~~~~~-----~~~~~~~~~~~~~~-~~~~~~~-- 92 (197)
++......++++| + +.++++.+ .++.|++|+. +++.+..+.....- ..-.....++++|+ +..+++.
T Consensus 140 ~~~~~P~~ia~~~~~--g~lyv~d~~~~~~I~~~~~-~g~~~~~~~~~g~~~~~~~~~~~~p~gia~d~~~g~l~v~d~~ 216 (329)
T 3fvz_A 140 NHFCQPTDVAVEPST--GAVFVSDGYCNSRIVQFSP-SGKFVTQWGEESSGSSPRPGQFSVPHSLALVPHLDQLCVADRE 216 (329)
T ss_dssp TCCSSEEEEEECTTT--CCEEEEECSSCCEEEEECT-TSCEEEEECEECCSSSCCTTEESCEEEEEEETTTTEEEEEETT
T ss_pred cccCCCcEEEEeCCC--CeEEEEeCCCCCeEEEEcC-CCCEEEEeccCCCCCCCCCcccCCCcEEEEECCCCEEEEEECC
Confidence 3445688999999 6 88888886 6899999994 44333222111000 00134789999998 5555443
Q ss_pred ---eEEEE------eeEec-ccCCCceeEEEEcCCCeEEEEe-------eCCCeEEEEEccCCcccceeeeeee---cCc
Q psy13207 93 ---SIMYE------AHSIN-AEHKDLIHDVAYDYYGLRMATC-------SSDQNIKVTRDVMGTRFDIETIGNF---EDH 152 (197)
Q Consensus 93 ---~~~~~------~~~~~-~~~~~~i~~~~~~~~~~~~~s~-------~~d~~i~~~d~~~~~~~~~~~~~~~---~~h 152 (197)
+++|+ +..+. ..+...+..++|+| .+.+++. ..+..|++||..+ ++.+..+ .++
T Consensus 217 ~~~I~~~~~~~G~~~~~~~~~~~~~~~~~~~~~p-g~~~~~~g~~~v~~~~~~~v~~~~~~~-----g~~~~~~~~~~~~ 290 (329)
T 3fvz_A 217 NGRIQCFKTDTKEFVREIKHASFGRNVFAISYIP-GFLFAVNGKPYFGDQEPVQGFVMNFSS-----GEIIDVFKPVRKH 290 (329)
T ss_dssp TTEEEEEETTTCCEEEEECCTTTTTCEEEEEEET-TEEEEEECCCCTTCSCCCCEEEEETTT-----CCEEEEECCSSSC
T ss_pred CCEEEEEECCCCcEEEEEeccccCCCcceeeecC-CEEEEeCCCEEeccCCCcEEEEEEcCC-----CeEEEEEcCCCCc
Confidence 78888 33332 13556778888886 3322222 3345899999876 4555555 356
Q ss_pred eecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 153 YCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 153 ~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
...+..++++|+|.++++...+++|++|++...
T Consensus 291 ~~~p~~ia~~~dG~lyvad~~~~~I~~~~~~~~ 323 (329)
T 3fvz_A 291 FDMPHDIVASEDGTVYIGDAHTNTVWKFTLTEK 323 (329)
T ss_dssp CSSEEEEEECTTSEEEEEESSSCCEEEEEEEEC
T ss_pred cCCeeEEEECCCCCEEEEECCCCEEEEEeCCcc
Confidence 677899999999988888889999999998654
No 170
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=99.15 E-value=2.8e-09 Score=79.55 Aligned_cols=56 Identities=7% Similarity=0.142 Sum_probs=44.1
Q ss_pred CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC--cchhhh
Q psy13207 128 QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK--RKKKKE 191 (197)
Q Consensus 128 ~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~--~~~~~~ 191 (197)
+.|.+||..+ .+.+..+..+. +.+++|+|||++|++++. ++|.+||..++ +.+..+
T Consensus 286 ~~v~viD~~t-----~~~v~~i~~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t~~l~~~~~i 343 (361)
T 2oiz_A 286 AEIWVMDTKT-----KQRVARIPGRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQPEPKLLRTI 343 (361)
T ss_dssp SEEEEEETTT-----TEEEEEEECTT--CCEEEEETTTTEEEEECS-SCEEEEECSSSSCEEEEEE
T ss_pred ceEEEEECCC-----CcEEEEEecCC--eeEEEECCCCCEEEEeCC-CeEEEEECCCCcceeeEEe
Confidence 3677777765 56666666655 789999999999998886 99999999998 665554
No 171
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=99.14 E-value=1.8e-09 Score=86.48 Aligned_cols=147 Identities=8% Similarity=-0.054 Sum_probs=97.6
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCC----------CcEEEEEcCC------cccccceeccceeccCCCeeeEEEccCCC
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAAD----------GLVRIYEAPD------VMNLSQWCLQHEVACPTLASCLTWNHSFS 87 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~d----------g~v~iw~~~~------~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 87 (197)
|...+.+++|+|+ |+.|++++.| ..|++||+.+ ++.. .+. ......+..++|+|+|+
T Consensus 128 ~~~~~~~~~~spD--g~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~~~~~~-~l~----~~~~~~~~~~~~SpDG~ 200 (662)
T 3azo_A 128 GGLRWADPVLLPE--RGEVWCMAEEFTGEGPSDVRRFLAAVPLDGSAAADRSAVR-ELS----DDAHRFVTGPRLSPDGR 200 (662)
T ss_dssp TCEEEEEEEEETT--TTEEEEEEEEECSSSTTCEEEEEEEEETTSTTTTCGGGSE-ESS----CSCSSEECCCEECTTSS
T ss_pred CCccccCcEECCC--CCEEEEEEecccCCCCCCceeEEEEEECCCCccccCCcee-EEE----ecCCCcccCceECCCCC
Confidence 6678899999999 9999988877 5899999987 4321 111 01234677899999999
Q ss_pred cccc-------------eeEEEEee---------EecccCCCceeEEEEcCCCeEEEEeeCCC--eEEEEEccCCcccce
Q psy13207 88 RFNS-------------ISIMYEAH---------SINAEHKDLIHDVAYDYYGLRMATCSSDQ--NIKVTRDVMGTRFDI 143 (197)
Q Consensus 88 ~~~~-------------~~~~~~~~---------~~~~~~~~~i~~~~~~~~~~~~~s~~~d~--~i~~~d~~~~~~~~~ 143 (197)
+++. .+.+|++. .+...+...+..++|+++.-++++++.++ .|.+||..+ .
T Consensus 201 ~la~~~~~~~~~~~~~~~i~~~d~~~~g~~~~~~~l~~~~~~~~~~~~~spdg~l~~~~~~~~~~~l~~~~~~~-----~ 275 (662)
T 3azo_A 201 QAVWLAWDHPRMPWEGTELKTARVTEDGRFADTRTLLGGPEEAIAQAEWAPDGSLIVATDRTGWWNLHRVDPAT-----G 275 (662)
T ss_dssp EEEEEEECTTCCTTTCEEEEEEEECTTSCEEEEEEEEEETTBCEEEEEECTTSCEEEEECTTSSCEEEEECTTT-----C
T ss_pred EEEEEECCCCCCCCCCcEEEEEEECCCCcccccEEeCCCCCceEcceEECCCCeEEEEECCCCCeEEEEEECCC-----C
Confidence 8752 25666632 12213467889999994332337777788 555555533 2
Q ss_pred eeeeeecCceec--------EEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 144 ETIGNFEDHYCT--------VWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 144 ~~~~~~~~h~~~--------v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
+.......+... +..++|+|+++++++++. +.++||.++
T Consensus 276 ~~~~l~~~~~~~~~p~w~~~~~~~~~~~~~~~~~~~~~-~~~~l~~~d 322 (662)
T 3azo_A 276 AATQLCRREEEFAGPLWTPGMRWFAPLANGLIAVVHGK-GAAVLGILD 322 (662)
T ss_dssp CEEESSCCSSBSSCCCCSTTCCSEEECTTSCEEEEEBS-SSCEEEEEE
T ss_pred ceeecccccccccCccccccCceEeEeCCCEEEEEEEc-CccEEEEEE
Confidence 222222222221 467899999999999998 999999544
No 172
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=99.14 E-value=8.6e-09 Score=74.51 Aligned_cols=167 Identities=11% Similarity=-0.054 Sum_probs=107.1
Q ss_pred ccccceeeee---eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccC
Q psy13207 9 EKCLNQWTRR---SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHS 85 (197)
Q Consensus 9 ~~~~~~w~~~---~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (197)
++.+..|+.. ..+..+...+.++.++|+ |+++++...++.|.+||..+++....... ..-.....+..++++|+
T Consensus 49 ~~~i~~~~~~~~~~~~~~~~~~~~~l~~~~d--g~l~v~~~~~~~i~~~d~~~g~~~~~~~~-~~~~~~~~~~~i~~d~~ 125 (296)
T 3e5z_A 49 QNRTWAWSDDGQLSPEMHPSHHQNGHCLNKQ--GHLIACSHGLRRLERQREPGGEWESIADS-FEGKKLNSPNDVCLAPD 125 (296)
T ss_dssp GTEEEEEETTSCEEEEESSCSSEEEEEECTT--CCEEEEETTTTEEEEECSTTCCEEEEECE-ETTEECCCCCCEEECTT
T ss_pred CCEEEEEECCCCeEEEECCCCCcceeeECCC--CcEEEEecCCCeEEEEcCCCCcEEEEeec-cCCCCCCCCCCEEECCC
Confidence 3445555543 234456677999999998 98888877788999999876653211110 00001345678999999
Q ss_pred CCcccc--------------------eeEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEcc-CC
Q psy13207 86 FSRFNS--------------------ISIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDV-MG 138 (197)
Q Consensus 86 ~~~~~~--------------------~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~-~~ 138 (197)
|+.+++ ...+|. +..+. .+......++|+++.-.+++.+.++.|.+|++. .+
T Consensus 126 G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~g~~~~~~-~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~~~g 204 (296)
T 3e5z_A 126 GSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPDGTLSAPI-RDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLNARG 204 (296)
T ss_dssp SCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTTSCEEEEE-CCCSSEEEEEECTTSCEEEEETTTTEEEEEEECSSS
T ss_pred CCEEEECCccccccccccccccccCCCcEEEEECCCCCEEEee-cCCCCCccEEECCCCCEEEEeCCCCeEEEEEECCCC
Confidence 988763 114554 33333 455667899999443323777888999999986 21
Q ss_pred cccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 139 TRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 139 ~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
..... ...+..+...+.+++++++|+++++. ++.|.+|+..
T Consensus 205 ~~~~~--~~~~~~~~~~p~~i~~d~~G~l~v~~--~~~v~~~~~~ 245 (296)
T 3e5z_A 205 ETEYQ--GVHFTVEPGKTDGLRVDAGGLIWASA--GDGVHVLTPD 245 (296)
T ss_dssp CEEEE--EEEECCSSSCCCSEEEBTTSCEEEEE--TTEEEEECTT
T ss_pred cCcCC--CeEeeCCCCCCCeEEECCCCCEEEEc--CCeEEEECCC
Confidence 11001 11222344556789999999977666 7899999986
No 173
>1q7f_A NHL, brain tumor CG10719-PA; BRAT, NHL domain, NHL repeat, beta-propeller, translation; 1.95A {Drosophila melanogaster} SCOP: b.68.9.1
Probab=99.14 E-value=1.1e-08 Score=73.55 Aligned_cols=154 Identities=12% Similarity=0.052 Sum_probs=104.0
Q ss_pred cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEE-ccCCCcccce------e
Q psy13207 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTW-NHSFSRFNSI------S 93 (197)
Q Consensus 22 ~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~-~~~~~~~~~~------~ 93 (197)
.++-..+.+++++|+ ++++++...++.|.+||.. ++....+....... ....+..+++ .+++..+++. +
T Consensus 26 ~g~~~~p~~v~~~~~--g~l~v~~~~~~~i~~~d~~-g~~~~~~~~~~~~~~~~~~p~~i~~~~~~g~l~v~~~~~~~~i 102 (286)
T 1q7f_A 26 EGQFTEPSGVAVNAQ--NDIIVADTNNHRIQIFDKE-GRFKFQFGECGKRDSQLLYPNRVAVVRNSGDIIVTERSPTHQI 102 (286)
T ss_dssp TTCBSCEEEEEECTT--CCEEEEEGGGTEEEEECTT-SCEEEEECCBSSSTTCBSSEEEEEEETTTTEEEEEECGGGCEE
T ss_pred CCccCCCceEEECCC--CCEEEEECCCCEEEEECCC-CcEEEEecccCCCcccccCceEEEEEcCCCeEEEEcCCCCCEE
Confidence 356678999999998 8888888899999999976 33322221100000 1245788888 4677665432 6
Q ss_pred EEEE-----eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec--CceecEEEEEEccCCC
Q psy13207 94 IMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE--DHYCTVWRVSWNITGT 166 (197)
Q Consensus 94 ~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~ 166 (197)
.+|+ +..+...+...+.+++++++.-++++...++.|.+||... ..+..+. .+...+..++++|+|+
T Consensus 103 ~~~d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g------~~~~~~~~~~~~~~p~~i~~~~~g~ 176 (286)
T 1q7f_A 103 QIYNQYGQFVRKFGATILQHPRGVTVDNKGRIIVVECKVMRVIIFDQNG------NVLHKFGCSKHLEFPNGVVVNDKQE 176 (286)
T ss_dssp EEECTTSCEEEEECTTTCSCEEEEEECTTSCEEEEETTTTEEEEECTTS------CEEEEEECTTTCSSEEEEEECSSSE
T ss_pred EEECCCCcEEEEecCccCCCceEEEEeCCCCEEEEECCCCEEEEEcCCC------CEEEEeCCCCccCCcEEEEECCCCC
Confidence 6776 3344323446788999984332336767789999999642 3333332 3445689999999999
Q ss_pred EEEEEeCCCcEEEEEcCC
Q psy13207 167 IVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 167 ~l~~~~~dg~i~iw~~~~ 184 (197)
++++.+.++.|++||...
T Consensus 177 l~v~~~~~~~i~~~~~~g 194 (286)
T 1q7f_A 177 IFISDNRAHCVKVFNYEG 194 (286)
T ss_dssp EEEEEGGGTEEEEEETTC
T ss_pred EEEEECCCCEEEEEcCCC
Confidence 888888899999999743
No 174
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=99.07 E-value=5.8e-08 Score=71.17 Aligned_cols=165 Identities=10% Similarity=0.007 Sum_probs=105.2
Q ss_pred ccccccceeeee--eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEcc
Q psy13207 7 QSEKCLNQWTRR--SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNH 84 (197)
Q Consensus 7 ~~~~~~~~w~~~--~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (197)
..+..++.|.-. ..+..+...+.++.|+|+ |++++++..++.|.+||..+++... +. ......+.++++++
T Consensus 24 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--g~l~~~~~~~~~i~~~d~~~~~~~~-~~----~~~~~~~~~i~~~~ 96 (333)
T 2dg1_A 24 ISESELQTITAEPWLEISKKGLQLEGLNFDRQ--GQLFLLDVFEGNIFKINPETKEIKR-PF----VSHKANPAAIKIHK 96 (333)
T ss_dssp CCGGGSCEEECEEEEEEESSCCCEEEEEECTT--SCEEEEETTTCEEEEECTTTCCEEE-EE----ECSSSSEEEEEECT
T ss_pred eecccCcccccceeEEEeccCccccCcEECCC--CCEEEEECCCCEEEEEeCCCCcEEE-Ee----eCCCCCcceEEECC
Confidence 445666777322 245567777899999998 8888888899999999987764321 11 11246789999999
Q ss_pred CCCcccc---------eeEEEE-----ee-Eec-ccCCCceeEEEEcCCCeEEEEeeC------CCeEEEEEccCCcccc
Q psy13207 85 SFSRFNS---------ISIMYE-----AH-SIN-AEHKDLIHDVAYDYYGLRMATCSS------DQNIKVTRDVMGTRFD 142 (197)
Q Consensus 85 ~~~~~~~---------~~~~~~-----~~-~~~-~~~~~~i~~~~~~~~~~~~~s~~~------d~~i~~~d~~~~~~~~ 142 (197)
+++.+++ .+.+|+ +. .+. ..+...+..++++++.-++++... .+.|..+|..+
T Consensus 97 dg~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~~l~~~~~~~----- 171 (333)
T 2dg1_A 97 DGRLFVCYLGDFKSTGGIFAATENGDNLQDIIEDLSTAYCIDDMVFDSKGGFYFTDFRGYSTNPLGGVYYVSPDF----- 171 (333)
T ss_dssp TSCEEEEECTTSSSCCEEEEECTTSCSCEEEECSSSSCCCEEEEEECTTSCEEEEECCCBTTBCCEEEEEECTTS-----
T ss_pred CCcEEEEeCCCCCCCceEEEEeCCCCEEEEEEccCccCCcccceEECCCCCEEEEeccccccCCCceEEEEeCCC-----
Confidence 9987654 466676 22 221 123456889999843322254433 24555555543
Q ss_pred eeeeeeecCceecEEEEEEccCCCEEE-EEeCCCcEEEEEcCC
Q psy13207 143 IETIGNFEDHYCTVWRVSWNITGTIVA-SSGDDGCVRLWKLKK 184 (197)
Q Consensus 143 ~~~~~~~~~h~~~v~~~~~~p~~~~l~-~~~~dg~i~iw~~~~ 184 (197)
.+ +..+..+...+..++|+|+|+.|+ +.+.++.|.+|+++.
T Consensus 172 ~~-~~~~~~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~ 213 (333)
T 2dg1_A 172 RT-VTPIIQNISVANGIALSTDEKVLWVTETTANRLHRIALED 213 (333)
T ss_dssp CC-EEEEEEEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECT
T ss_pred CE-EEEeecCCCcccceEECCCCCEEEEEeCCCCeEEEEEecC
Confidence 11 112222234578899999998654 445678999999964
No 175
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=99.00 E-value=1.9e-08 Score=81.34 Aligned_cols=153 Identities=8% Similarity=0.042 Sum_probs=95.4
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCCC-----cEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAADG-----LVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----- 92 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~dg-----~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----- 92 (197)
+|...+..++|+|+ |++|+.++.++ .|++||+.+++.... .+. ...+..++|+|+++.|+.+
T Consensus 122 ~~~~~~~~~~~SPD--g~~la~~~~~~G~~~~~i~v~d~~tg~~~~~-----~~~-~~~~~~~~wspDg~~l~~~~~~~~ 193 (710)
T 2xdw_A 122 DGTVALRGYAFSED--GEYFAYGLSASGSDWVTIKFMKVDGAKELPD-----VLE-RVKFSCMAWTHDGKGMFYNAYPQQ 193 (710)
T ss_dssp TSCEEEEEEEECTT--SSEEEEEEEETTCSCEEEEEEETTTTEEEEE-----EEE-EECSCCEEECTTSSEEEEEECCCC
T ss_pred CCCEEEEEEEECCC--CCEEEEEEcCCCCceEEEEEEECCCCCCCcc-----ccc-CcccceEEEEeCCCEEEEEEECCc
Confidence 35457889999999 98888765443 899999998764321 111 1236789999999887432
Q ss_pred ----------------eEEEEe--------eEecc-cCCCceeEEEEc--CCCeEEEEeeC-----CCeEEEEEccCCc-
Q psy13207 93 ----------------SIMYEA--------HSINA-EHKDLIHDVAYD--YYGLRMATCSS-----DQNIKVTRDVMGT- 139 (197)
Q Consensus 93 ----------------~~~~~~--------~~~~~-~~~~~i~~~~~~--~~~~~~~s~~~-----d~~i~~~d~~~~~- 139 (197)
+++|++ ..+.. .|...+..+.|+ +..+ +..+. +..|.+||+.+..
T Consensus 194 ~~~~~~~~~~~~~~~~v~~~~l~t~~~~~~~v~~~~~~~~~~~~~~~SpDg~~l--~~~~~~~~~~~~~l~~~d~~~~~~ 271 (710)
T 2xdw_A 194 DGKSDGTETSTNLHQKLYYHVLGTDQSEDILCAEFPDEPKWMGGAELSDDGRYV--LLSIREGCDPVNRLWYCDLQQESN 271 (710)
T ss_dssp SSCCSSSCCCCCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEE--EEEEECSSSSCCEEEEEEGGGSSS
T ss_pred cccccccccccCCCCEEEEEECCCCcccceEEeccCCCCeEEEEEEEcCCCCEE--EEEEEccCCCccEEEEEECccccc
Confidence 566661 11120 234557789999 4444 44433 5789999986400
Q ss_pred cc-ceeeeeeecCceecEEEEEEccCCCEEEEEeCC----CcEEEEEcCCCc
Q psy13207 140 RF-DIETIGNFEDHYCTVWRVSWNITGTIVASSGDD----GCVRLWKLKKKR 186 (197)
Q Consensus 140 ~~-~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d----g~i~iw~~~~~~ 186 (197)
.. .......+..+...+.. .|+|+|+.|+..+.+ +.|.+||+.+++
T Consensus 272 ~~~~~~~~~~l~~~~~~~~~-~~s~dg~~l~~~s~~~~~~~~l~~~d~~~~~ 322 (710)
T 2xdw_A 272 GITGILKWVKLIDNFEGEYD-YVTNEGTVFTFKTNRHSPNYRLINIDFTDPE 322 (710)
T ss_dssp SSCSSCCCEEEECSSSSCEE-EEEEETTEEEEEECTTCTTCEEEEEETTSCC
T ss_pred ccCCccceEEeeCCCCcEEE-EEeccCCEEEEEECCCCCCCEEEEEeCCCCC
Confidence 00 01123334444444443 588999888776653 359999998764
No 176
>3pe7_A Oligogalacturonate lyase; seven-bladed beta-propeller; 1.65A {Yersinia enterocolitica subsp}
Probab=98.99 E-value=2.6e-08 Score=74.41 Aligned_cols=152 Identities=8% Similarity=-0.068 Sum_probs=93.8
Q ss_pred eecCCCcceeE-----EEECCCCCCcEEEEEeC-CCc--EEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc
Q psy13207 20 NLVDSRTSVTD-----VKFGPKQLGLVLATCAA-DGL--VRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS 91 (197)
Q Consensus 20 ~~~~h~~~v~~-----~~~~~~~~~~~l~s~~~-dg~--v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (197)
.+..|...... .+|+|+ |+.|+.++. ++. |.+||+.+++...... .....+..+.|+|+++.|+.
T Consensus 25 ~lt~~~~~~~~~~~~~~~~SpD--g~~l~~~~~~~g~~~l~~~d~~~g~~~~lt~-----~~~~~~~~~~~spdg~~l~~ 97 (388)
T 3pe7_A 25 RLTPPDVTCHRNYFYQKCFTRD--GSKLLFGGAFDGPWNYYLLDLNTQVATQLTE-----GRGDNTFGGFLSPDDDALFY 97 (388)
T ss_dssp ECSCTTSCEECCCTTSCCBCTT--SCEEEEEECTTSSCEEEEEETTTCEEEECCC-----SSCBCSSSCEECTTSSEEEE
T ss_pred EecCCcccccchhhcCccCCCC--CCEEEEEEcCCCCceEEEEeCCCCceEEeee-----CCCCCccceEEcCCCCEEEE
Confidence 45556555554 889999 998888877 674 7888887765322111 01223346789999998764
Q ss_pred e-----eEEEE------eeEecccCCCceeEEEE--cCCCeEEEE----------------------eeCCCeEEEEEcc
Q psy13207 92 I-----SIMYE------AHSINAEHKDLIHDVAY--DYYGLRMAT----------------------CSSDQNIKVTRDV 136 (197)
Q Consensus 92 ~-----~~~~~------~~~~~~~~~~~i~~~~~--~~~~~~~~s----------------------~~~d~~i~~~d~~ 136 (197)
. +.+|+ ..... .+...+....| +++.-+++. ...+..|.+||+.
T Consensus 98 ~~~~~~l~~~d~~~g~~~~~~~-~~~~~~~~~~~~~~~dg~~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~d~~ 176 (388)
T 3pe7_A 98 VKDGRNLMRVDLATLEENVVYQ-VPAEWVGYGTWVANSDCTKLVGIEIRREDWVPLTDWKKFHEFYFTKPCCRLMRVDLK 176 (388)
T ss_dssp EETTTEEEEEETTTCCEEEEEE-CCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHHGGGCCCEEEEEEETT
T ss_pred EeCCCeEEEEECCCCcceeeee-chhhcccccceeECCCCCeeccccccCcccccccccchhhhhhccCCcceEEEEECC
Confidence 3 67777 11222 33444444444 433222232 2345788999987
Q ss_pred CCcccceeeeeeecCceecEEEEEEcc-CCCEEEEEeCC------CcEEEEEcCCC
Q psy13207 137 MGTRFDIETIGNFEDHYCTVWRVSWNI-TGTIVASSGDD------GCVRLWKLKKK 185 (197)
Q Consensus 137 ~~~~~~~~~~~~~~~h~~~v~~~~~~p-~~~~l~~~~~d------g~i~iw~~~~~ 185 (197)
++ + ...+..+...+..++|+| ||+.|+..+.+ ..|.++|....
T Consensus 177 ~g-----~-~~~l~~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~~ 226 (388)
T 3pe7_A 177 TG-----E-STVILQENQWLGHPIYRPYDDSTVAFCHEGPHDLVDARMWLINEDGT 226 (388)
T ss_dssp TC-----C-EEEEEEESSCEEEEEEETTEEEEEEEEECSCTTTSSCSEEEEETTSC
T ss_pred CC-----c-eEEeecCCccccccEECCCCCCEEEEEEecCCCCCcceEEEEeCCCC
Confidence 62 2 223334556789999999 99998887753 36777777643
No 177
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.98 E-value=6.8e-08 Score=68.58 Aligned_cols=150 Identities=9% Similarity=-0.056 Sum_probs=100.3
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE---
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE--- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--- 97 (197)
..+.++.+.|+ |+++++...++.|.+|+..+..... . .......+..++++++++.+++. +.+|+
T Consensus 108 ~~p~~i~~~~~--g~l~v~~~~~~~i~~~~~~~~~~~~--~---~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 180 (270)
T 1rwi_B 108 NYPEGLAVDTQ--GAVYVADRGNNRVVKLAAGSKTQTV--L---PFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAES 180 (270)
T ss_dssp SSEEEEEECTT--CCEEEEEGGGTEEEEECTTCCSCEE--C---CCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTT
T ss_pred CCCcceEECCC--CCEEEEECCCCEEEEEECCCceeEe--e---ccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCC
Confidence 56889999998 8888887788899999755432110 0 11112457889999998865432 67777
Q ss_pred --eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC
Q psy13207 98 --AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG 175 (197)
Q Consensus 98 --~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg 175 (197)
.......+...+.+++++++..++++...++.|.+|+.... ........+...+.+++++|+|+++++...++
T Consensus 181 ~~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~~v~~~~~~~~-----~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~ 255 (270)
T 1rwi_B 181 NNQVVLPFTDITAPWGIAVDEAGTVYVTEHNTNQVVKLLAGST-----TSTVLPFTGLNTPLAVAVDSDRTVYVADRGND 255 (270)
T ss_dssp CCEEECCCSSCCSEEEEEECTTCCEEEEETTTSCEEEECTTCS-----CCEECCCCSCSCEEEEEECTTCCEEEEEGGGT
T ss_pred CceEeecccCCCCceEEEECCCCCEEEEECCCCcEEEEcCCCC-----cceeeccCCCCCceeEEECCCCCEEEEECCCC
Confidence 11221123356788999844322266667889999998641 11111222335688999999999888888999
Q ss_pred cEEEEEcCCCcc
Q psy13207 176 CVRLWKLKKKRK 187 (197)
Q Consensus 176 ~i~iw~~~~~~~ 187 (197)
.|.++++...+.
T Consensus 256 ~v~~~~~~~~~~ 267 (270)
T 1rwi_B 256 RVVKLTSLEHHH 267 (270)
T ss_dssp EEEEECCCGGGS
T ss_pred EEEEEcCCCccc
Confidence 999999876544
No 178
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces morookaensis} PDB: 3azp_A 3azq_A
Probab=98.91 E-value=1.2e-08 Score=81.58 Aligned_cols=156 Identities=7% Similarity=-0.129 Sum_probs=99.3
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEE--eCCCcEEEEEcCCcccccceeccceeccCCCee---------eEEEc--cCCC
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATC--AADGLVRIYEAPDVMNLSQWCLQHEVACPTLAS---------CLTWN--HSFS 87 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~--~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~---------~~~~~--~~~~ 87 (197)
+.+|...+..++|+++ +.++++. +.++...||....+....++.. ....+. ...|+ |+++
T Consensus 19 ~~~~~~~~~~~~~s~~--~~~~~~~~~~~~~~~~l~~~~~~~~~~~l~~-----~~~~~~~~~~~~~~~~~~~~~SPDg~ 91 (662)
T 3azo_A 19 VASRSGRPACVGAVGD--EVWWVAPRPAEAGRATLVRRRADGAEESALP-----APWNVRNRVFEYSGFPWAGVPRPAGG 91 (662)
T ss_dssp HHHTCSCCEEEEEETT--EEEEEEEETTTTTEEEEEEECTTSCEEESSC-----TTCCBCCCGGGTCCCCEEEECCSSSS
T ss_pred HhhcCCccceeEEcCC--eEEEEecCcccCCcEEEEEECCCCCcceeCC-----CCccccccccccCCccceeeeecCCC
Confidence 5678899999999987 7777777 6688999999643332222111 112222 45565 9998
Q ss_pred c-ccce----eEEEE--ee--------Eeccc-----CCCceeEEEEcCCCeEEEEeeCC----------CeEEEEEccC
Q psy13207 88 R-FNSI----SIMYE--AH--------SINAE-----HKDLIHDVAYDYYGLRMATCSSD----------QNIKVTRDVM 137 (197)
Q Consensus 88 ~-~~~~----~~~~~--~~--------~~~~~-----~~~~i~~~~~~~~~~~~~s~~~d----------~~i~~~d~~~ 137 (197)
. ++.. ..+|. +. .+. . |...+..++|+|+.-.|+.++.+ ..|++||+.+
T Consensus 92 ~~la~~~~~~~~l~~~~~~~~g~~~~~~l~-~~~~~~~~~~~~~~~~spDg~~l~~~~~~~~~~~~~~~~~~i~~~~~~~ 170 (662)
T 3azo_A 92 PLLVFTHFGDQRLYAFEPDAPGGAVPRPLT-PVSAVGGGLRWADPVLLPERGEVWCMAEEFTGEGPSDVRRFLAAVPLDG 170 (662)
T ss_dssp CEEEEEBTTTCCEEEECTTSTTCCCCEECS-CCCCSTTCEEEEEEEEETTTTEEEEEEEEECSSSTTCEEEEEEEEETTS
T ss_pred eEEEEEECCCCeEEEEcCCCCCCCCCEecc-CCccCCCCccccCcEECCCCCEEEEEEecccCCCCCCceeEEEEEECCC
Confidence 8 6543 23444 32 222 2 45567889999444333777666 5889999864
Q ss_pred Ccccceeeeeeec-CceecEEEEEEccCCCEEEEEeCCC--------cEEEEEcCC
Q psy13207 138 GTRFDIETIGNFE-DHYCTVWRVSWNITGTIVASSGDDG--------CVRLWKLKK 184 (197)
Q Consensus 138 ~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~~~~~dg--------~i~iw~~~~ 184 (197)
....+......+. .+...+..++|+|||++|+.++.++ .|++||+..
T Consensus 171 ~~~~~~~~~~~l~~~~~~~~~~~~~SpDG~~la~~~~~~~~~~~~~~~i~~~d~~~ 226 (662)
T 3azo_A 171 SAAADRSAVRELSDDAHRFVTGPRLSPDGRQAVWLAWDHPRMPWEGTELKTARVTE 226 (662)
T ss_dssp TTTTCGGGSEESSCSCSSEECCCEECTTSSEEEEEEECTTCCTTTCEEEEEEEECT
T ss_pred CccccCCceeEEEecCCCcccCceECCCCCEEEEEECCCCCCCCCCcEEEEEEECC
Confidence 1000002223344 4556778899999999999887553 799999983
No 179
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.90 E-value=2e-08 Score=81.06 Aligned_cols=122 Identities=10% Similarity=-0.025 Sum_probs=78.9
Q ss_pred CCCcceeEEEECCCCCCcEEE-----EEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEE
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLA-----TCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYE 97 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~-----s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (197)
+|...+..++|||+ |++|| +|+.+..|++||+.+++.+.. ..+. ......++|+|+++.|
T Consensus 118 ~~~~~~~~~~~SPD--G~~la~~~~~~G~~~~~i~v~dl~tg~~~~~----~~~~-~~~~~~~~wspDg~~l-------- 182 (695)
T 2bkl_A 118 DGTVSLGTWAVSWD--GKKVAFAQKPNAADEAVLHVIDVDSGEWSKV----DVIE-GGKYATPKWTPDSKGF-------- 182 (695)
T ss_dssp SSCEEEEEEEECTT--SSEEEEEEEETTCSCCEEEEEETTTCCBCSS----CCBS-CCTTCCCEECTTSSEE--------
T ss_pred CCCEEEEEEEECCC--CCEEEEEECCCCCceEEEEEEECCCCCCcCC----cccC-cccccceEEecCCCEE--------
Confidence 46667999999999 99888 455567899999998764310 0111 1112456666666543
Q ss_pred eeEecccCCCceeEEEEcCCCeEEEEeeCC-------------CeEEEEEccCCcccceeeeeeecCceecEEEEEEccC
Q psy13207 98 AHSINAEHKDLIHDVAYDYYGLRMATCSSD-------------QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT 164 (197)
Q Consensus 98 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d-------------~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~ 164 (197)
+.++.| ..|++|++.+.... ...+.....|...+..+.|+||
T Consensus 183 ------------------------~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~-~~lv~~~~~~~~~~~~~~~SpD 237 (695)
T 2bkl_A 183 ------------------------YYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSK-DTVVHERTGDPTTFLQSDLSRD 237 (695)
T ss_dssp ------------------------EEEECCCCTTSCGGGGGGGCEEEEEETTSCGGG-CEEEECCCCCTTCEEEEEECTT
T ss_pred ------------------------EEEEecCCCCCccccCCCCCEEEEEECCCCchh-ceEEEecCCCCEEEEEEEECCC
Confidence 333333 34999998763211 2344455556667889999999
Q ss_pred CCEEEEEeCCC----cEEEEEcCC
Q psy13207 165 GTIVASSGDDG----CVRLWKLKK 184 (197)
Q Consensus 165 ~~~l~~~~~dg----~i~iw~~~~ 184 (197)
|++|+.++.++ .|.+|+...
T Consensus 238 G~~l~~~~~~~~~~~~l~~~~~~~ 261 (695)
T 2bkl_A 238 GKYLFVYILRGWSENDVYWKRPGE 261 (695)
T ss_dssp SCCEEEEEEETTTEEEEEEECTTC
T ss_pred CCEEEEEEeCCCCceEEEEEcCCC
Confidence 99998887666 566665543
No 180
>3e5z_A Putative gluconolactonase; X-RAY NESG Q9RXN3 gluconolactonase, structural genomics, PSI protein structure initiative; 2.01A {Deinococcus radiodurans}
Probab=98.89 E-value=1.5e-07 Score=67.93 Aligned_cols=147 Identities=12% Similarity=-0.031 Sum_probs=96.4
Q ss_pred ecCCCcceeEEEECCCCCCc-EEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eE
Q psy13207 21 LVDSRTSVTDVKFGPKQLGL-VLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SI 94 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 94 (197)
+..+.....++.|+|+ ++ +++++..++.|..|+..++ ...+.. ....+.+++++++++.+++. +.
T Consensus 23 l~~~~~~~eg~~~d~~--g~~l~~~~~~~~~i~~~~~~~~--~~~~~~-----~~~~~~~l~~~~dg~l~v~~~~~~~i~ 93 (296)
T 3e5z_A 23 LADGFTWTEGPVYVPA--RSAVIFSDVRQNRTWAWSDDGQ--LSPEMH-----PSHHQNGHCLNKQGHLIACSHGLRRLE 93 (296)
T ss_dssp EECCCSSEEEEEEEGG--GTEEEEEEGGGTEEEEEETTSC--EEEEES-----SCSSEEEEEECTTCCEEEEETTTTEEE
T ss_pred EecCCccccCCeEeCC--CCEEEEEeCCCCEEEEEECCCC--eEEEEC-----CCCCcceeeECCCCcEEEEecCCCeEE
Confidence 4455667889999998 87 7888889999999998875 222221 24567899999999876543 67
Q ss_pred EEE-----eeEeccc----CCCceeEEEEcCCCeEEEE----eeC-------------CCeEEEEEccCCcccceeeeee
Q psy13207 95 MYE-----AHSINAE----HKDLIHDVAYDYYGLRMAT----CSS-------------DQNIKVTRDVMGTRFDIETIGN 148 (197)
Q Consensus 95 ~~~-----~~~~~~~----~~~~i~~~~~~~~~~~~~s----~~~-------------d~~i~~~d~~~~~~~~~~~~~~ 148 (197)
+|+ +..+... ....++.++++++.-++++ ++. .+.|..++.. .. +..
T Consensus 94 ~~d~~~g~~~~~~~~~~~~~~~~~~~i~~d~~G~l~vtd~~~g~~~~~~~~~~~~~~~~~~l~~~~~~------g~-~~~ 166 (296)
T 3e5z_A 94 RQREPGGEWESIADSFEGKKLNSPNDVCLAPDGSLWFSDPTYGIDKPEEGYGGEMELPGRWVFRLAPD------GT-LSA 166 (296)
T ss_dssp EECSTTCCEEEEECEETTEECCCCCCEEECTTSCEEEEECSHHHHCGGGSSCCCCCSSSCEEEEECTT------SC-EEE
T ss_pred EEcCCCCcEEEEeeccCCCCCCCCCCEEECCCCCEEEECCccccccccccccccccCCCcEEEEECCC------CC-EEE
Confidence 777 1222101 1234567888833322265 331 2345555442 11 222
Q ss_pred ecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 149 FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 149 ~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
+..+......++|+|+|+.+++.+.++.|.+|++.
T Consensus 167 ~~~~~~~~~gi~~s~dg~~lv~~~~~~~i~~~~~~ 201 (296)
T 3e5z_A 167 PIRDRVKPNGLAFLPSGNLLVSDTGDNATHRYCLN 201 (296)
T ss_dssp EECCCSSEEEEEECTTSCEEEEETTTTEEEEEEEC
T ss_pred eecCCCCCccEEECCCCCEEEEeCCCCeEEEEEEC
Confidence 33445567899999999988777888999999987
No 181
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.87 E-value=4e-08 Score=73.42 Aligned_cols=149 Identities=8% Similarity=-0.005 Sum_probs=90.3
Q ss_pred eEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee-ccCCCe-------------eeEEEccCCCcccc---
Q psy13207 29 TDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV-ACPTLA-------------SCLTWNHSFSRFNS--- 91 (197)
Q Consensus 29 ~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~-~~~~~~-------------~~~~~~~~~~~~~~--- 91 (197)
..+.|+|+ |+.|+.++.++.|++||+.+++........... .....+ ....|+|+++.++.
T Consensus 84 ~~~~~spd--g~~l~~~~~~~~l~~~d~~~~~~~~~~~~~~~~~~~g~~l~~~~~~~~~~~~~~~~~~spdg~~~~~~~~ 161 (396)
T 3c5m_A 84 FGGFISTD--ERAFFYVKNELNLMKVDLETLEEQVIYTVDEEWKGYGTWVANSDCTKLVGIEILKRDWQPLTSWEKFAEF 161 (396)
T ss_dssp TTCEECTT--SSEEEEEETTTEEEEEETTTCCEEEEEECCTTEEEEEEEEECTTSSEEEEEEEEGGGCCCCCSHHHHHHH
T ss_pred ccceECCC--CCEEEEEEcCCcEEEEECCCCCcEEEEecccccCCCCCEEEeccCCccccccccccccCCCCcceeeeee
Confidence 34889999 999999999999999999876532211111000 000000 00457788876532
Q ss_pred -------eeEEEE-----eeEecccCCCceeEEEEcC-CCeEEEEeeCC------CeEEEEEccCCcccceeeeeeecCc
Q psy13207 92 -------ISIMYE-----AHSINAEHKDLIHDVAYDY-YGLRMATCSSD------QNIKVTRDVMGTRFDIETIGNFEDH 152 (197)
Q Consensus 92 -------~~~~~~-----~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d------~~i~~~d~~~~~~~~~~~~~~~~~h 152 (197)
.+.+|+ ...+. .+...+..+.|++ +.-+|+..+.+ ..|.+||... .. ...+..+
T Consensus 162 ~~~~~~~~l~~~d~~~g~~~~~~-~~~~~~~~~~~sp~dg~~l~~~~~~~~~~~~~~l~~~d~~~-----~~-~~~l~~~ 234 (396)
T 3c5m_A 162 YHTNPTCRLIKVDIETGELEVIH-QDTAWLGHPIYRPFDDSTVGFCHEGPHDLVDARMWLVNEDG-----SN-VRKIKEH 234 (396)
T ss_dssp HHTCCCEEEEEEETTTCCEEEEE-EESSCEEEEEEETTEEEEEEEEECSCSSSCSCCCEEEETTS-----CC-CEESSCC
T ss_pred ccCCCcceEEEEECCCCcEEeec-cCCcccccceECCCCCCEEEEEecCCCCCCCceEEEEECCC-----Cc-eeEeecc
Confidence 267777 33333 4566788899986 33222443332 4678888754 22 2222222
Q ss_pred --eecEEEEEEccCCCEEEEEeCC-----CcEEEEEcCCCc
Q psy13207 153 --YCTVWRVSWNITGTIVASSGDD-----GCVRLWKLKKKR 186 (197)
Q Consensus 153 --~~~v~~~~~~p~~~~l~~~~~d-----g~i~iw~~~~~~ 186 (197)
...+..++|+|+|++|+.++.+ +.|++||+.+++
T Consensus 235 ~~~~~~~~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~ 275 (396)
T 3c5m_A 235 AEGESCTHEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLE 275 (396)
T ss_dssp CTTEEEEEEEECTTSSCEEEEEEETTTCCEEEEEECTTTCC
T ss_pred CCCccccceEECCCCCEEEEEecCCCCccceEEEEECCCCC
Confidence 3357889999999988777654 449999997754
No 182
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.87 E-value=6.8e-08 Score=69.42 Aligned_cols=138 Identities=11% Similarity=-0.035 Sum_probs=92.2
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---eEEEE-----eeEecccCCCcee
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI---SIMYE-----AHSINAEHKDLIH 110 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~~~~~~~~~~~i~ 110 (197)
+++|++++.|+.|.+||..+++.+-++.... ...+.++.+.|+++.+++. +..|+ +-.+.......+.
T Consensus 5 ~~~lv~~~~~~~v~~~d~~tG~~~w~~~~~~----~~~~~~~~~~pdG~ilvs~~~~V~~~d~~G~~~W~~~~~~~~~~~ 80 (276)
T 3no2_A 5 QHLLVGGSGWNKIAIINKDTKEIVWEYPLEK----GWECNSVAATKAGEILFSYSKGAKMITRDGRELWNIAAPAGCEMQ 80 (276)
T ss_dssp CEEEEECTTCSEEEEEETTTTEEEEEEECCT----TCCCCEEEECTTSCEEEECBSEEEEECTTSCEEEEEECCTTCEEE
T ss_pred CcEEEeeCCCCEEEEEECCCCeEEEEeCCCc----cCCCcCeEECCCCCEEEeCCCCEEEECCCCCEEEEEcCCCCcccc
Confidence 7899999999999999998887654333211 1367889999999887743 45555 3333312234677
Q ss_pred EEEEcCCCeEEEEeeC-CCeEEEEEccCCcccceeeeeeec------CceecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 111 DVAYDYYGLRMATCSS-DQNIKVTRDVMGTRFDIETIGNFE------DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 111 ~~~~~~~~~~~~s~~~-d~~i~~~d~~~~~~~~~~~~~~~~------~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
++.+.++.-.+++.+. ++.|..+|.. ++.+..+. .+......+++.++|+++++...++.|..||.+
T Consensus 81 ~~~~~~dG~~lv~~~~~~~~v~~vd~~------Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~lv~~~~~~~v~~~d~~ 154 (276)
T 3no2_A 81 TARILPDGNALVAWCGHPSTILEVNMK------GEVLSKTEFETGIERPHAQFRQINKNKKGNYLVPLFATSEVREIAPN 154 (276)
T ss_dssp EEEECTTSCEEEEEESTTEEEEEECTT------SCEEEEEEECCSCSSGGGSCSCCEECTTSCEEEEETTTTEEEEECTT
T ss_pred ccEECCCCCEEEEecCCCCEEEEEeCC------CCEEEEEeccCCCCcccccccCceECCCCCEEEEecCCCEEEEECCC
Confidence 7777733332377666 7777777753 33332221 222345566789999999999999999999987
Q ss_pred CCcc
Q psy13207 184 KKRK 187 (197)
Q Consensus 184 ~~~~ 187 (197)
++.
T Consensus 155 -G~~ 157 (276)
T 3no2_A 155 -GQL 157 (276)
T ss_dssp -SCE
T ss_pred -CCE
Confidence 554
No 183
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.87 E-value=5e-07 Score=71.29 Aligned_cols=151 Identities=8% Similarity=0.007 Sum_probs=101.2
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcC--CcccccceeccceeccCCCeeeEEEc----cCCCcccce------eE
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAP--DVMNLSQWCLQHEVACPTLASCLTWN----HSFSRFNSI------SI 94 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~--~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~~~~------~~ 94 (197)
.+..+.|+|+ |+++++++.|+.|.+||+. +.+.+ ..+........++|+ |+++++..+ +.
T Consensus 198 ~p~~v~~SpD--Gr~lyv~~~dg~V~viD~~~~t~~~v------~~i~~G~~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ 269 (567)
T 1qks_A 198 AVHISRLSAS--GRYLFVIGRDGKVNMIDLWMKEPTTV------AEIKIGSEARSIETSKMEGWEDKYAIAGAYWPPQYV 269 (567)
T ss_dssp CEEEEEECTT--SCEEEEEETTSEEEEEETTSSSCCEE------EEEECCSEEEEEEECCSTTCTTTEEEEEEEETTEEE
T ss_pred CccceEECCC--CCEEEEEcCCCeEEEEECCCCCCcEe------EEEecCCCCceeEEccccCCCCCEEEEEEccCCeEE
Confidence 5668999999 9999999999999999995 44333 233334456789999 699987654 67
Q ss_pred EEE------eeEeccc---------C-CCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEE
Q psy13207 95 MYE------AHSINAE---------H-KDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVW 157 (197)
Q Consensus 95 ~~~------~~~~~~~---------~-~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~ 157 (197)
++| +..+... | ...+..+..+ .....+++...+|.|.++|...... ..+..+. ......
T Consensus 270 ViD~~t~~~~~~i~~~~~~~~~~~~~p~~rva~i~~s~~~~~~vv~~~~~g~v~~vd~~~~~~---~~v~~i~-~~~~~~ 345 (567)
T 1qks_A 270 IMDGETLEPKKIQSTRGMTYDEQEYHPEPRVAAILASHYRPEFIVNVKETGKILLVDYTDLNN---LKTTEIS-AERFLH 345 (567)
T ss_dssp EEETTTCCEEEEEECCEECTTTCCEESCCCEEEEEECSSSSEEEEEETTTTEEEEEETTCSSE---EEEEEEE-CCSSEE
T ss_pred EEECCCCcEEEEEeccccccccccccCCCceEEEEEcCCCCEEEEEecCCCeEEEEecCCCcc---ceeeeee-cccccc
Confidence 778 3333210 1 1256667776 2223336667789999999865221 1122221 223466
Q ss_pred EEEEccCCCEEEEEe-CCCcEEEEEcCCCcchh
Q psy13207 158 RVSWNITGTIVASSG-DDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 158 ~~~~~p~~~~l~~~~-~dg~i~iw~~~~~~~~~ 189 (197)
++.|+|+|++++++. .++.|.++|+.+++...
T Consensus 346 d~~~~pdgr~~~va~~~sn~V~ViD~~t~kl~~ 378 (567)
T 1qks_A 346 DGGLDGSHRYFITAANARNKLVVIDTKEGKLVA 378 (567)
T ss_dssp EEEECTTSCEEEEEEGGGTEEEEEETTTTEEEE
T ss_pred CceECCCCCEEEEEeCCCCeEEEEECCCCcEEE
Confidence 889999999987766 57899999999876443
No 184
>1xip_A Nucleoporin NUP159; beta-propeller, transport protein; 2.50A {Saccharomyces cerevisiae} SCOP: b.69.14.1 PDB: 3pez_C* 3rrm_C*
Probab=98.84 E-value=1.2e-07 Score=71.21 Aligned_cols=128 Identities=12% Similarity=-0.013 Sum_probs=90.3
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc-----eeEEEE
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS-----ISIMYE 97 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~ 97 (197)
.+.+ |+.+.| + +..|+++ .++.|++||+.+....... .. ...++.++.+.+.. ++. .+.+|+
T Consensus 86 ~lp~-V~~l~f--d--~~~L~v~-~~~~l~v~dv~sl~~~~~~---~~--~~~~v~~i~~~~p~--~av~~~dG~L~v~d 152 (388)
T 1xip_A 86 EIPD-VIFVCF--H--GDQVLVS-TRNALYSLDLEELSEFRTV---TS--FEKPVFQLKNVNNT--LVILNSVNDLSALD 152 (388)
T ss_dssp ECTT-EEEEEE--E--TTEEEEE-ESSEEEEEESSSTTCEEEE---EE--CSSCEEEEEECSSE--EEEEETTSEEEEEE
T ss_pred eCCC-eeEEEE--C--CCEEEEE-cCCcEEEEEchhhhccCcc---ce--eecceeeEEecCCC--EEEEECCCCEEEEE
Confidence 3566 999999 7 8899888 8899999999876432211 11 13456666665543 332 278998
Q ss_pred ee--EecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceee--eeee------c---CceecEEEEEEccC
Q psy13207 98 AH--SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIET--IGNF------E---DHYCTVWRVSWNIT 164 (197)
Q Consensus 98 ~~--~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~--~~~~------~---~h~~~v~~~~~~p~ 164 (197)
+. ... .+...|.+++|+++.+ +.|..||.+++|+.+.. .. ...+ . +|...|.++.|.++
T Consensus 153 l~~~~~~-~~~~~Vs~v~WSpkG~--~vg~~dg~i~~~~~~~~-----~~~~k~~I~~Pp~~~~~~~~~~~V~sI~wl~~ 224 (388)
T 1xip_A 153 LRTKSTK-QLAQNVTSFDVTNSQL--AVLLKDRSFQSFAWRNG-----EMEKQFEFSLPSELEELPVEEYSPLSVTILSP 224 (388)
T ss_dssp TTTCCEE-EEEESEEEEEECSSEE--EEEETTSCEEEEEEETT-----EEEEEEEECCCHHHHTSCTTTSEEEEEEESSS
T ss_pred ccCCccc-cccCCceEEEEcCCce--EEEEcCCcEEEEcCCCc-----cccccceecCCcccccccCCCeeEEEEEEecC
Confidence 43 122 3557899999997777 89999999999988652 21 2223 2 46788999999999
Q ss_pred CCEEEEE
Q psy13207 165 GTIVASS 171 (197)
Q Consensus 165 ~~~l~~~ 171 (197)
+.++++=
T Consensus 225 ~~flv~y 231 (388)
T 1xip_A 225 QDFLAVF 231 (388)
T ss_dssp SEEEEEE
T ss_pred CeEEEEE
Confidence 9988873
No 185
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.83 E-value=8.7e-07 Score=64.12 Aligned_cols=161 Identities=9% Similarity=-0.002 Sum_probs=101.0
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----------
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----------- 92 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------- 92 (197)
....+.++.++|+ |+++++. ++.|.+||..+++....... ..-.....+..++++|+++.+++.
T Consensus 52 ~~~~~~~i~~~~d--G~l~v~~--~~~l~~~d~~~g~~~~~~~~-~~~~~~~~~~di~~d~dG~l~~~~~~~~~~~~~~~ 126 (297)
T 3g4e_A 52 MDAPVSSVALRQS--GGYVATI--GTKFCALNWKEQSAVVLATV-DNDKKNNRFNDGKVDPAGRYFAGTMAEETAPAVLE 126 (297)
T ss_dssp CSSCEEEEEEBTT--SSEEEEE--TTEEEEEETTTTEEEEEEEC-CTTCSSEEEEEEEECTTSCEEEEEEECCSBTTBCC
T ss_pred CCCceEEEEECCC--CCEEEEE--CCeEEEEECCCCcEEEEEec-CCCCCCCCCCCEEECCCCCEEEecCCccccccccc
Confidence 4567899999998 8855543 56899999876543211110 000013457889999999876543
Q ss_pred ---eEEEE------eeEecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEcc--CCcccceeeeeeecCceecEEEEE
Q psy13207 93 ---SIMYE------AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDV--MGTRFDIETIGNFEDHYCTVWRVS 160 (197)
Q Consensus 93 ---~~~~~------~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~--~~~~~~~~~~~~~~~h~~~v~~~~ 160 (197)
..+|. +..+. .+....+.++|+++. .++++.+.++.|.+|++. ++.....+.+..+..+......++
T Consensus 127 ~~~~~l~~~d~~g~~~~~~-~~~~~pngi~~spdg~~lyv~~~~~~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~ 205 (297)
T 3g4e_A 127 RHQGALYSLFPDHHVKKYF-DQVDISNGLDWSLDHKIFYYIDSLSYSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMC 205 (297)
T ss_dssp TTCEEEEEECTTSCEEEEE-EEESBEEEEEECTTSCEEEEEEGGGTEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEE
T ss_pred CCCcEEEEEECCCCEEEEe-eccccccceEEcCCCCEEEEecCCCCcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeE
Confidence 24554 12222 233456789998443 233566678899999874 221111223334444445678899
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 161 WNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 161 ~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
++++|++.++...++.|..||..+++....
T Consensus 206 ~d~~G~lwva~~~~~~v~~~d~~tG~~~~~ 235 (297)
T 3g4e_A 206 IDAEGKLWVACYNGGRVIRLDPVTGKRLQT 235 (297)
T ss_dssp EBTTSCEEEEEETTTEEEEECTTTCCEEEE
T ss_pred ECCCCCEEEEEcCCCEEEEEcCCCceEEEE
Confidence 999999888887888999999987665443
No 186
>3no2_A Uncharacterized protein; six-bladed beta-propeller, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE CIT PEG; 1.35A {Bacteroides caccae}
Probab=98.81 E-value=2.4e-07 Score=66.58 Aligned_cols=165 Identities=8% Similarity=0.017 Sum_probs=107.4
Q ss_pred ccccccceeeee-----eeecCCC-cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 7 QSEKCLNQWTRR-----SNLVDSR-TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 7 ~~~~~~~~w~~~-----~~~~~h~-~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
..++.+.+|+.. .++..+. ..+.++.+.|+ |++|+ +.++.|..||. +++.+-++... ....+.++
T Consensus 12 ~~~~~v~~~d~~tG~~~w~~~~~~~~~~~~~~~~pd--G~ilv--s~~~~V~~~d~-~G~~~W~~~~~----~~~~~~~~ 82 (276)
T 3no2_A 12 SGWNKIAIINKDTKEIVWEYPLEKGWECNSVAATKA--GEILF--SYSKGAKMITR-DGRELWNIAAP----AGCEMQTA 82 (276)
T ss_dssp TTCSEEEEEETTTTEEEEEEECCTTCCCCEEEECTT--SCEEE--ECBSEEEEECT-TSCEEEEEECC----TTCEEEEE
T ss_pred CCCCEEEEEECCCCeEEEEeCCCccCCCcCeEECCC--CCEEE--eCCCCEEEECC-CCCEEEEEcCC----CCcccccc
Confidence 356667777651 2344444 46889999998 99888 34778999998 66655433321 12356778
Q ss_pred EEccCCCcccce----eEEE--E-----eeEec-----ccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccc
Q psy13207 81 TWNHSFSRFNSI----SIMY--E-----AHSIN-----AEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFD 142 (197)
Q Consensus 81 ~~~~~~~~~~~~----~~~~--~-----~~~~~-----~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~ 142 (197)
.+.++++.+++. .+++ + +..+. ..+......++.. ++.+ ++...++.|..||..
T Consensus 83 ~~~~dG~~lv~~~~~~~~v~~vd~~Gk~l~~~~~~~~~~~~~~~~~~v~~~~~G~~l--v~~~~~~~v~~~d~~------ 154 (276)
T 3no2_A 83 RILPDGNALVAWCGHPSTILEVNMKGEVLSKTEFETGIERPHAQFRQINKNKKGNYL--VPLFATSEVREIAPN------ 154 (276)
T ss_dssp EECTTSCEEEEEESTTEEEEEECTTSCEEEEEEECCSCSSGGGSCSCCEECTTSCEE--EEETTTTEEEEECTT------
T ss_pred EECCCCCEEEEecCCCCEEEEEeCCCCEEEEEeccCCCCcccccccCceECCCCCEE--EEecCCCEEEEECCC------
Confidence 888888877543 2233 2 11111 0111233444555 5666 888899999999985
Q ss_pred eeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchh
Q psy13207 143 IETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 143 ~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~ 189 (197)
++.+..+... ..+.++...++|+++++++.++.|..+|..+++.+-
T Consensus 155 G~~~w~~~~~-~~~~~~~~~~~g~~~v~~~~~~~v~~~d~~tG~~~w 200 (276)
T 3no2_A 155 GQLLNSVKLS-GTPFSSAFLDNGDCLVACGDAHCFVQLNLESNRIVR 200 (276)
T ss_dssp SCEEEEEECS-SCCCEEEECTTSCEEEECBTTSEEEEECTTTCCEEE
T ss_pred CCEEEEEECC-CCccceeEcCCCCEEEEeCCCCeEEEEeCcCCcEEE
Confidence 4555555443 345667888999999999988899999998776533
No 187
>2dg1_A DRP35, lactonase; beta propeller, hydrolase; 1.72A {Staphylococcus aureus} SCOP: b.68.6.1 PDB: 2dg0_A 2dso_A
Probab=98.81 E-value=2e-06 Score=62.87 Aligned_cols=154 Identities=8% Similarity=0.017 Sum_probs=98.4
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCC----CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce------
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAAD----GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------ 92 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~d----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 92 (197)
.+...+.++.++|+ |+++++...+ +.|.+||..+........ .......+..+.++|+++.+++.
T Consensus 84 ~~~~~~~~i~~~~d--g~l~v~~~~~~~~~~~i~~~d~~~~~~~~~~~---~~~~~~~~~~i~~d~~g~l~v~~~~~~~~ 158 (333)
T 2dg1_A 84 SHKANPAAIKIHKD--GRLFVCYLGDFKSTGGIFAATENGDNLQDIIE---DLSTAYCIDDMVFDSKGGFYFTDFRGYST 158 (333)
T ss_dssp CSSSSEEEEEECTT--SCEEEEECTTSSSCCEEEEECTTSCSCEEEEC---SSSSCCCEEEEEECTTSCEEEEECCCBTT
T ss_pred CCCCCcceEEECCC--CcEEEEeCCCCCCCceEEEEeCCCCEEEEEEc---cCccCCcccceEECCCCCEEEEecccccc
Confidence 45677999999998 8888877666 689999987654321111 11124568899999999876543
Q ss_pred ---eEEEE-------eeEecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEccCC-cccc---eeeeeeecCceecEE
Q psy13207 93 ---SIMYE-------AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMG-TRFD---IETIGNFEDHYCTVW 157 (197)
Q Consensus 93 ---~~~~~-------~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~-~~~~---~~~~~~~~~h~~~v~ 157 (197)
..+|. +..+. .....+..++|+++. .++++.+.++.|.+||.++. .... ......+.++ ..+.
T Consensus 159 ~~~~~l~~~~~~~~~~~~~~-~~~~~~~~i~~~~dg~~l~v~~~~~~~i~~~d~~~~g~~~~~~~~~~~~~~~~~-~~~~ 236 (333)
T 2dg1_A 159 NPLGGVYYVSPDFRTVTPII-QNISVANGIALSTDEKVLWVTETTANRLHRIALEDDGVTIQPFGATIPYYFTGH-EGPD 236 (333)
T ss_dssp BCCEEEEEECTTSCCEEEEE-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSSSEEEEEEEEEEECCSS-SEEE
T ss_pred CCCceEEEEeCCCCEEEEee-cCCCcccceEECCCCCEEEEEeCCCCeEEEEEecCCCcCcccccceEEEecCCC-CCCC
Confidence 23444 12222 223356788998443 22255566789999998531 1110 0111122222 3568
Q ss_pred EEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 158 RVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 158 ~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
.++++++|+++++...++.|.+||..
T Consensus 237 ~i~~d~~G~l~v~~~~~~~v~~~d~~ 262 (333)
T 2dg1_A 237 SCCIDSDDNLYVAMYGQGRVLVFNKR 262 (333)
T ss_dssp EEEEBTTCCEEEEEETTTEEEEECTT
T ss_pred ceEECCCCCEEEEEcCCCEEEEECCC
Confidence 89999999988888888999999984
No 188
>2bkl_A Prolyl endopeptidase; mechanistic study, celiac sprue, hydrolase, protease; HET: ZAH MES; 1.5A {Myxococcus xanthus}
Probab=98.78 E-value=5.7e-07 Score=72.65 Aligned_cols=166 Identities=11% Similarity=-0.062 Sum_probs=103.0
Q ss_pred cccccceeeeeee--e-cCCCcce--eEEEECCCCCCcEEEEEeCCCc-------------EEEEEcCCcccccceeccc
Q psy13207 8 SEKCLNQWTRRSN--L-VDSRTSV--TDVKFGPKQLGLVLATCAADGL-------------VRIYEAPDVMNLSQWCLQH 69 (197)
Q Consensus 8 ~~~~~~~w~~~~~--~-~~h~~~v--~~~~~~~~~~~~~l~s~~~dg~-------------v~iw~~~~~~~~~~~~~~~ 69 (197)
.+.++++|++... + ..+...+ ..+.|+|+ |+.|+.++.|.. |++|++.++...... ..
T Consensus 145 ~~~~i~v~dl~tg~~~~~~~~~~~~~~~~~wspD--g~~l~~~~~d~~~~~~~~~~~~~~~v~~~~l~t~~~~~~l--v~ 220 (695)
T 2bkl_A 145 DEAVLHVIDVDSGEWSKVDVIEGGKYATPKWTPD--SKGFYYEWLPTDPSIKVDERPGYTTIRYHTLGTEPSKDTV--VH 220 (695)
T ss_dssp SCCEEEEEETTTCCBCSSCCBSCCTTCCCEECTT--SSEEEEEECCCCTTSCGGGGGGGCEEEEEETTSCGGGCEE--EE
T ss_pred ceEEEEEEECCCCCCcCCcccCcccccceEEecC--CCEEEEEEecCCCCCccccCCCCCEEEEEECCCCchhceE--EE
Confidence 3457788876531 2 2233333 68999999 999999988776 999999876532111 11
Q ss_pred eec-cCCCeeeEEEccCCCcccce---------eEEEE-----eeEecccCCCceeEEEEc-CCCeEEEEee---CCCeE
Q psy13207 70 EVA-CPTLASCLTWNHSFSRFNSI---------SIMYE-----AHSINAEHKDLIHDVAYD-YYGLRMATCS---SDQNI 130 (197)
Q Consensus 70 ~~~-~~~~~~~~~~~~~~~~~~~~---------~~~~~-----~~~~~~~~~~~i~~~~~~-~~~~~~~s~~---~d~~i 130 (197)
... ....+..+.|+|+|++++.. +.+++ ...+. .+...+....++ ++ ++ +... .++.|
T Consensus 221 ~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~l~~~~~~~~~~~~l~-~~~~~~~~~~~~~g~-l~-~~s~~~~~~~~l 297 (695)
T 2bkl_A 221 ERTGDPTTFLQSDLSRDGKYLFVYILRGWSENDVYWKRPGEKDFRLLV-KGVGAKYEVHAWKDR-FY-VLTDEGAPRQRV 297 (695)
T ss_dssp CCCCCTTCEEEEEECTTSCCEEEEEEETTTEEEEEEECTTCSSCEEEE-ECSSCCEEEEEETTE-EE-EEECTTCTTCEE
T ss_pred ecCCCCEEEEEEEECCCCCEEEEEEeCCCCceEEEEEcCCCCceEEee-cCCCceEEEEecCCc-EE-EEECCCCCCCEE
Confidence 111 13467899999999987543 23333 33344 344455555666 44 42 3333 35889
Q ss_pred EEEEccCCcccceeeeeeecCc-eecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 131 KVTRDVMGTRFDIETIGNFEDH-YCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 131 ~~~d~~~~~~~~~~~~~~~~~h-~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
.+||+.+....... ..+..+ ...+..++|+ ++.++++...|+..++|.++
T Consensus 298 ~~~d~~~~~~~~~~--~l~~~~~~~~l~~~~~~-~~~lv~~~~~dg~~~l~~~~ 348 (695)
T 2bkl_A 298 FEVDPAKPARASWK--EIVPEDSSASLLSVSIV-GGHLSLEYLKDATSEVRVAT 348 (695)
T ss_dssp EEEBTTBCSGGGCE--EEECCCSSCEEEEEEEE-TTEEEEEEEETTEEEEEEEE
T ss_pred EEEeCCCCCccCCe--EEecCCCCCeEEEEEEE-CCEEEEEEEECCEEEEEEEe
Confidence 99998653110011 122222 4467888888 77888899999999988765
No 189
>1rwi_B Serine/threonine-protein kinase PKND; beta propeller, structural genomics, PSI, protein structure initiative; 1.80A {Mycobacterium tuberculosis} SCOP: b.68.9.1 PDB: 1rwl_A
Probab=98.77 E-value=9.7e-07 Score=62.54 Aligned_cols=147 Identities=10% Similarity=0.002 Sum_probs=96.3
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE---
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE--- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~--- 97 (197)
..+.++++.++ |+++++.. ++.|..||....... .+. ......+..++++++++.+++. +.+|+
T Consensus 67 ~~p~~i~~~~~--g~l~v~~~-~~~i~~~d~~~~~~~-~~~----~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~ 138 (270)
T 1rwi_B 67 YQPQGLAVDGA--GTVYVTDF-NNRVVTLAAGSNNQT-VLP----FDGLNYPEGLAVDTQGAVYVADRGNNRVVKLAAGS 138 (270)
T ss_dssp CSCCCEEECTT--CCEEEEET-TTEEEEECTTCSCCE-ECC----CCSCSSEEEEEECTTCCEEEEEGGGTEEEEECTTC
T ss_pred CCcceeEECCC--CCEEEEcC-CCEEEEEeCCCceEe-eee----cCCcCCCcceEECCCCCEEEEECCCCEEEEEECCC
Confidence 56788999998 88776666 889999997654321 110 1112467899999998866542 56666
Q ss_pred -eeE-ecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC
Q psy13207 98 -AHS-INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG 175 (197)
Q Consensus 98 -~~~-~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg 175 (197)
... ........+.+++++++.-++++...++.|.+||.... ........+...+.+++++++|.++++...++
T Consensus 139 ~~~~~~~~~~~~~p~~i~~~~~g~l~v~~~~~~~i~~~~~~~~-----~~~~~~~~~~~~p~~i~~d~~g~l~v~~~~~~ 213 (270)
T 1rwi_B 139 KTQTVLPFTGLNDPDGVAVDNSGNVYVTDTDNNRVVKLEAESN-----NQVVLPFTDITAPWGIAVDEAGTVYVTEHNTN 213 (270)
T ss_dssp CSCEECCCCSCCSCCCEEECTTCCEEEEEGGGTEEEEECTTTC-----CEEECCCSSCCSEEEEEECTTCCEEEEETTTS
T ss_pred ceeEeeccccCCCceeEEEeCCCCEEEEECCCCEEEEEecCCC-----ceEeecccCCCCceEEEECCCCCEEEEECCCC
Confidence 111 11122345788898832222366666789999998652 22222222335678999999998888777889
Q ss_pred cEEEEEcCCC
Q psy13207 176 CVRLWKLKKK 185 (197)
Q Consensus 176 ~i~iw~~~~~ 185 (197)
.|.+|+....
T Consensus 214 ~v~~~~~~~~ 223 (270)
T 1rwi_B 214 QVVKLLAGST 223 (270)
T ss_dssp CEEEECTTCS
T ss_pred cEEEEcCCCC
Confidence 9999998654
No 190
>3c5m_A Oligogalacturonate lyase; blade-shaped beta-propeller, structural genomics, PSI-2, protein structure initiative; 2.60A {Vibrio parahaemolyticus rimd 2210633}
Probab=98.76 E-value=2.4e-07 Score=69.20 Aligned_cols=159 Identities=10% Similarity=0.013 Sum_probs=91.8
Q ss_pred cccceeeee----eeecCCCcceeEEEECC-CCCCcEEEEEeCC------CcEEEEEcCCcccccceeccceeccCCCee
Q psy13207 10 KCLNQWTRR----SNLVDSRTSVTDVKFGP-KQLGLVLATCAAD------GLVRIYEAPDVMNLSQWCLQHEVACPTLAS 78 (197)
Q Consensus 10 ~~~~~w~~~----~~~~~h~~~v~~~~~~~-~~~~~~l~s~~~d------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~ 78 (197)
..+..|++. ..+..+...+..+.|+| + +..|+.++.+ ..|.+|++...+... +.. -.....+.
T Consensus 168 ~~l~~~d~~~g~~~~~~~~~~~~~~~~~sp~d--g~~l~~~~~~~~~~~~~~l~~~d~~~~~~~~---l~~-~~~~~~~~ 241 (396)
T 3c5m_A 168 CRLIKVDIETGELEVIHQDTAWLGHPIYRPFD--DSTVGFCHEGPHDLVDARMWLVNEDGSNVRK---IKE-HAEGESCT 241 (396)
T ss_dssp EEEEEEETTTCCEEEEEEESSCEEEEEEETTE--EEEEEEEECSCSSSCSCCCEEEETTSCCCEE---SSC-CCTTEEEE
T ss_pred ceEEEEECCCCcEEeeccCCcccccceECCCC--CCEEEEEecCCCCCCCceEEEEECCCCceeE---eec-cCCCcccc
Confidence 345555532 12334566788999999 7 7766665543 368888876543211 111 00023477
Q ss_pred eEEEccCCCcccce----------eEEEE-----eeEecccCCCceeEEEEcC-CCeEEEEee----------------C
Q psy13207 79 CLTWNHSFSRFNSI----------SIMYE-----AHSINAEHKDLIHDVAYDY-YGLRMATCS----------------S 126 (197)
Q Consensus 79 ~~~~~~~~~~~~~~----------~~~~~-----~~~~~~~~~~~i~~~~~~~-~~~~~~s~~----------------~ 126 (197)
.+.|+|+++.++.. +.+|+ ...+. ... ... +.|++ +.-+++.++ .
T Consensus 242 ~~~~spdg~~l~~~~~~~~~~~~~l~~~d~~~g~~~~l~-~~~-~~~-~~~s~~dg~~l~~~~~~~p~~~~~~~~~~~~~ 318 (396)
T 3c5m_A 242 HEFWIPDGSAMAYVSYFKGQTDRVIYKANPETLENEEVM-VMP-PCS-HLMSNFDGSLMVGDGCDAPVDVADADSYNIEN 318 (396)
T ss_dssp EEEECTTSSCEEEEEEETTTCCEEEEEECTTTCCEEEEE-ECC-SEE-EEEECSSSSEEEEEECCC----------CCCC
T ss_pred ceEECCCCCEEEEEecCCCCccceEEEEECCCCCeEEee-eCC-CCC-CCccCCCCceEEEecCCcceeeccccccccCC
Confidence 88999999986533 66777 12222 111 223 77875 443335543 3
Q ss_pred CCeEEEEEccCCcccceeeeeeecCcee-----------cEEEEEEccCCCEEEEEeC-CCcEEEEEcC
Q psy13207 127 DQNIKVTRDVMGTRFDIETIGNFEDHYC-----------TVWRVSWNITGTIVASSGD-DGCVRLWKLK 183 (197)
Q Consensus 127 d~~i~~~d~~~~~~~~~~~~~~~~~h~~-----------~v~~~~~~p~~~~l~~~~~-dg~i~iw~~~ 183 (197)
+..|.+||..++ . ...+..+.. .+..++|+|+|+.|+.++. ++...+|.++
T Consensus 319 ~~~i~~~d~~~~-----~-~~~l~~~~~~~~~~~~~~~~~~~~~~~s~dg~~l~~~s~~~~~~~l~~~~ 381 (396)
T 3c5m_A 319 DPFLYVLNTKAK-----S-AQKLCKHSTSWDVLDGDRQITHPHPSFTPNDDGVLFTSDFEGVPAIYIAD 381 (396)
T ss_dssp CCEEEEEETTTT-----B-CCEEEECCCCCCCBTTBSSTTCCCCEECTTSSEEEEEECTTSSCEEEEEE
T ss_pred CCcEEEEecccC-----c-eEEccCCCCccccccccccCCCCCceEccCCCeEEEEecCCCCceEEEEE
Confidence 478999998752 1 122222322 2456789999998887764 5666666554
No 191
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.70 E-value=1.9e-06 Score=62.35 Aligned_cols=147 Identities=8% Similarity=0.044 Sum_probs=92.7
Q ss_pred cceeEEEECCCCCCcEEEEEeCC---------------CcEEEEEcCCcccccceeccceeccCCCeeeEEEc----cCC
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAAD---------------GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWN----HSF 86 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~d---------------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~ 86 (197)
..+.++.+.|+ |+++++...+ +.|..++.. ++.. .+ .........++|+ |++
T Consensus 117 ~~~~~i~~d~~--g~l~v~~~~~~~~~~~~~~~~~~~~~~l~~~~~~-g~~~-~~-----~~~~~~~~~i~~~~~~d~dg 187 (314)
T 1pjx_A 117 QGCNDCAFDYE--GNLWITAPAGEVAPADYTRSMQEKFGSIYCFTTD-GQMI-QV-----DTAFQFPNGIAVRHMNDGRP 187 (314)
T ss_dssp BCCCEEEECTT--SCEEEEECBCBCTTSCCCBTTSSSCEEEEEECTT-SCEE-EE-----EEEESSEEEEEEEECTTSCE
T ss_pred cCCcCEEECCC--CCEEEEecCcccccccccccccCCCCeEEEECCC-CCEE-Ee-----ccCCCCcceEEEecccCCCC
Confidence 35789999998 8888777655 456666654 2211 11 1112345788999 998
Q ss_pred Cccc-c-----eeEEEEee---------Eec--ccCC-CceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeee
Q psy13207 87 SRFN-S-----ISIMYEAH---------SIN--AEHK-DLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN 148 (197)
Q Consensus 87 ~~~~-~-----~~~~~~~~---------~~~--~~~~-~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~ 148 (197)
+.+. + .+.+|+.. .+. ..+. .....++++++..++++...++.|.+||.++ .+.+..
T Consensus 188 ~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~-----g~~~~~ 262 (314)
T 1pjx_A 188 YQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGTHEGGADGMDFDEDNNLLVANWGSSHIEVFGPDG-----GQPKMR 262 (314)
T ss_dssp EEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCCSSCEEEEEEEBTTCCEEEEEETTTEEEEECTTC-----BSCSEE
T ss_pred CEEEEEECCCCeEEEEECCCCCccccceEEEECCCCCCCCCCceEECCCCCEEEEEcCCCEEEEEcCCC-----CcEeEE
Confidence 6542 2 26777632 111 0222 5578888883332226666788999999864 233334
Q ss_pred ecCceecEEEEEEccCCCEE-EEEeCCCcEEEEEcCCCc
Q psy13207 149 FEDHYCTVWRVSWNITGTIV-ASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 149 ~~~h~~~v~~~~~~p~~~~l-~~~~~dg~i~iw~~~~~~ 186 (197)
+..+...+.+++++|+|+.| ++...++.|..|++...+
T Consensus 263 ~~~~~~~~~~i~~~~dg~~l~v~~~~~~~l~~~~~~~~g 301 (314)
T 1pjx_A 263 IRCPFEKPSNLHFKPQTKTIFVTEHENNAVWKFEWQRNG 301 (314)
T ss_dssp EECSSSCEEEEEECTTSSEEEEEETTTTEEEEEECSSCB
T ss_pred EeCCCCCceeEEECCCCCEEEEEeCCCCeEEEEeCCCCC
Confidence 44455678999999999955 455567899999987644
No 192
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.69 E-value=5.2e-07 Score=73.40 Aligned_cols=149 Identities=17% Similarity=0.120 Sum_probs=88.8
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCC-----CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce------
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAAD-----GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------ 92 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~d-----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------ 92 (197)
|...+..+.|+|+ |++|+.++.+ ..|++||+.+++.+.. .+. ...+..++|+|+ +.++.+
T Consensus 161 ~~~~~~~~~~SPD--G~~la~~~~~~G~e~~~i~v~dl~tg~~~~~-----~~~-~~~~~~~~wspD-~~l~~~~~~~~~ 231 (741)
T 1yr2_A 161 GATALDAWAASDD--GRLLAYSVQDGGSDWRTVKFVGVADGKPLAD-----ELK-WVKFSGLAWLGN-DALLYSRFAEPK 231 (741)
T ss_dssp --EEEEEEEECTT--SSEEEEEEEETTCSEEEEEEEETTTCCEEEE-----EEE-EEESCCCEESTT-SEEEEEECCCC-
T ss_pred CCEEEEeEEECCC--CCEEEEEEcCCCCceEEEEEEECCCCCCCCc-----cCC-CceeccEEEECC-CEEEEEEecCcc
Confidence 4447889999999 9888876543 3699999998865321 111 112357889999 766432
Q ss_pred -------------eEEEEe--------eEecc-cCCCceeEEEEcCCCeEEEEeeC-----CCeEEEEEccCCcccceee
Q psy13207 93 -------------SIMYEA--------HSINA-EHKDLIHDVAYDYYGLRMATCSS-----DQNIKVTRDVMGTRFDIET 145 (197)
Q Consensus 93 -------------~~~~~~--------~~~~~-~~~~~i~~~~~~~~~~~~~s~~~-----d~~i~~~d~~~~~~~~~~~ 145 (197)
+++|++ ..+.. .+...+..+.|+++.-.++..+. ...|.+||+.++. ...
T Consensus 232 ~~~~~~~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~~---~~~ 308 (741)
T 1yr2_A 232 EGQAFQALNYNQTVWLHRLGTPQSADQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNGK---IGP 308 (741)
T ss_dssp -------CCCCCEEEEEETTSCGGGCEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETTE---ECC
T ss_pred cccccccCCCCCEEEEEECCCCchhCEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCCC---Ccc
Confidence 445551 12220 22235788899944322244443 3489999986520 121
Q ss_pred eeeecCceecEEEEEEccCCCEEEEEeCC----CcEEEEEcCCC
Q psy13207 146 IGNFEDHYCTVWRVSWNITGTIVASSGDD----GCVRLWKLKKK 185 (197)
Q Consensus 146 ~~~~~~h~~~v~~~~~~p~~~~l~~~~~d----g~i~iw~~~~~ 185 (197)
...+..+...+... ++|+|+.|+..+.+ +.|.+||+.++
T Consensus 309 ~~~l~~~~~~~~~~-~~~dg~~l~~~s~~~~~~~~l~~~d~~~~ 351 (741)
T 1yr2_A 309 VTALIPDLKAQWDF-VDGVGDQLWFVSGDGAPLKKIVRVDLSGS 351 (741)
T ss_dssp CEEEECSSSSCEEE-EEEETTEEEEEECTTCTTCEEEEEECSSS
T ss_pred cEEecCCCCceEEE-EeccCCEEEEEECCCCCCCEEEEEeCCCC
Confidence 33333343344444 34899988887754 45999998775
No 193
>1pjx_A Dfpase, DIISOPROPYLFLUOROPHOSPHATASE; phosphotriesterase (PTE), nitrogen-calcium coordination, BET propeller; HET: ME2 MES PGE; 0.85A {Loligo vulgaris} SCOP: b.68.6.1 PDB: 1e1a_A* 2gvv_A* 2gvw_A 3byc_A 3kgg_A 3o4p_A* 3li3_A 2gvx_A 2gvu_A 3li4_A 2iaq_A 3li5_A* 2iao_A 2iap_A 2iau_A 2iax_A 2iaw_A 2ias_A 2iat_A 2iar_A ...
Probab=98.66 E-value=5.5e-06 Score=59.91 Aligned_cols=159 Identities=3% Similarity=-0.119 Sum_probs=95.3
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccc-eeccceeccCCCeeeEEEccCCCcccce----------
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQ-WCLQHEVACPTLASCLTWNHSFSRFNSI---------- 92 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------- 92 (197)
+...+.++.++++ +..|..++..+.|..||.. ++.... ..... -.....+.+++++++++.+++.
T Consensus 69 ~~~~~~~i~~~~~--~g~l~v~~~~~~l~~~d~~-g~~~~~~~~~~~-~~~~~~~~~i~~d~~g~l~v~~~~~~~~~~~~ 144 (314)
T 1pjx_A 69 YGGIPAGCQCDRD--ANQLFVADMRLGLLVVQTD-GTFEEIAKKDSE-GRRMQGCNDCAFDYEGNLWITAPAGEVAPADY 144 (314)
T ss_dssp EECCEEEEEECSS--SSEEEEEETTTEEEEEETT-SCEEECCSBCTT-SCBCBCCCEEEECTTSCEEEEECBCBCTTSCC
T ss_pred CCCCCceEEEecC--CCcEEEEECCCCEEEEeCC-CCEEEEEeccCC-CccccCCcCEEECCCCCEEEEecCcccccccc
Confidence 4467889999986 3344444445578899987 432211 11000 0012457899999998776443
Q ss_pred --------eEEEE------eeEecccCCCceeEEEEc----CCC-eEEEEeeCCCeEEEEEcc-CCcccceeeeeeecCc
Q psy13207 93 --------SIMYE------AHSINAEHKDLIHDVAYD----YYG-LRMATCSSDQNIKVTRDV-MGTRFDIETIGNFEDH 152 (197)
Q Consensus 93 --------~~~~~------~~~~~~~~~~~i~~~~~~----~~~-~~~~s~~~d~~i~~~d~~-~~~~~~~~~~~~~~~h 152 (197)
..+|. +..+. .+......++++ ++. .++++...++.|.+||.+ .+..........+..+
T Consensus 145 ~~~~~~~~~~l~~~~~~g~~~~~~-~~~~~~~~i~~~~~~d~dg~~l~v~~~~~~~i~~~~~~~~g~~~~~~~~~~~~~~ 223 (314)
T 1pjx_A 145 TRSMQEKFGSIYCFTTDGQMIQVD-TAFQFPNGIAVRHMNDGRPYQLIVAETPTKKLWSYDIKGPAKIENKKVWGHIPGT 223 (314)
T ss_dssp CBTTSSSCEEEEEECTTSCEEEEE-EEESSEEEEEEEECTTSCEEEEEEEETTTTEEEEEEEEETTEEEEEEEEEECCCC
T ss_pred cccccCCCCeEEEECCCCCEEEec-cCCCCcceEEEecccCCCCCEEEEEECCCCeEEEEECCCCCccccceEEEECCCC
Confidence 23443 11222 223345778888 665 223555668899999975 2111111233334444
Q ss_pred e-ecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 153 Y-CTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 153 ~-~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
. ..+..++++++|+++++...++.|.+||.++++.
T Consensus 224 ~~~~p~~i~~d~~G~l~v~~~~~~~i~~~d~~~g~~ 259 (314)
T 1pjx_A 224 HEGGADGMDFDEDNNLLVANWGSSHIEVFGPDGGQP 259 (314)
T ss_dssp SSCEEEEEEEBTTCCEEEEEETTTEEEEECTTCBSC
T ss_pred CCCCCCceEECCCCCEEEEEcCCCEEEEEcCCCCcE
Confidence 3 5678899999999888887889999999875543
No 194
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.66 E-value=1.2e-06 Score=64.31 Aligned_cols=131 Identities=11% Similarity=0.111 Sum_probs=84.9
Q ss_pred eeEEEECCCCCCcEEEEEeCC---------------------------CcEEEEEcCCcccccceeccceeccCCCeeeE
Q psy13207 28 VTDVKFGPKQLGLVLATCAAD---------------------------GLVRIYEAPDVMNLSQWCLQHEVACPTLASCL 80 (197)
Q Consensus 28 v~~~~~~~~~~~~~l~s~~~d---------------------------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~ 80 (197)
+..+.|+|+ |+.|+.++.+ ..|.+||+.+++.+..+.. . .+..+
T Consensus 106 ~~~~~wspd--g~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d~~~~~~~~~l~~------~-~~~~~ 176 (347)
T 2gop_A 106 IRSLEWNED--SRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFDTESEEVIEEFEK------P-RFSSG 176 (347)
T ss_dssp EEEEEECTT--SSEEEEEEECCCC---------CCCC---------CEEEEEEEETTTTEEEEEEEE------E-TTCEE
T ss_pred ccceeECCC--CCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEECCCCeEEeeecC------C-Ccccc
Confidence 899999999 8888877642 5788999887654222211 2 67788
Q ss_pred EEccCCCcccce------------eEEEE-----eeEecccCCCceeEEEEc--CCCeEEEEeeCC--------CeEEEE
Q psy13207 81 TWNHSFSRFNSI------------SIMYE-----AHSINAEHKDLIHDVAYD--YYGLRMATCSSD--------QNIKVT 133 (197)
Q Consensus 81 ~~~~~~~~~~~~------------~~~~~-----~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d--------~~i~~~ 133 (197)
.|+|++ .++++ ..+|. ...+. .+ ..+..+ + ++.+ +.++.+ ..|.+|
T Consensus 177 ~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d~~~~~~l~-~~-~~~~~~--spdg~~l--~~~~~~~~~~~~~~~~l~~~ 249 (347)
T 2gop_A 177 IWHRDK-IVVNVPHREIIPQYFKFWDIYIWEDGKEEKMF-EK-VSFYAV--DSDGERI--LLYGKPEKKYMSEHNKLYIY 249 (347)
T ss_dssp EEETTE-EEEEEECCCSSCCSSCCEEEEEEETTEEEEEE-EE-ESEEEE--EECSSCE--EEEECCSSSCCCSSCEEEEE
T ss_pred cCCCCe-EEEEEecccccccccccccEEEeCCCceEEec-cC-cceeeE--CCCCCEE--EEEEccccCCccccceEEEE
Confidence 999998 54332 24444 22222 22 333333 5 5556 555433 467777
Q ss_pred EccCCcccceeeeeeecCceecEEE-EEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 134 RDVMGTRFDIETIGNFEDHYCTVWR-VSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 134 d~~~~~~~~~~~~~~~~~h~~~v~~-~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
| + .+.......+...+.. +.|+ ++ ++++++.++.+++| +.+
T Consensus 250 d--~-----~~~~~l~~~~~~~~~~~~~~s-dg-~~~~~~~~~~~~l~-~~~ 291 (347)
T 2gop_A 250 D--G-----KEVMGILDEVDRGVGQAKIKD-GK-VYFTLFEEGSVNLY-IWD 291 (347)
T ss_dssp C--S-----SCEEESSTTCCSEEEEEEEET-TE-EEEEEEETTEEEEE-EES
T ss_pred C--C-----CceEeccccCCcccCCccEEc-Cc-EEEEEecCCcEEEE-EcC
Confidence 7 3 3333344456667876 9999 88 89999999999999 874
No 195
>2gop_A Trilobed protease; beta propeller, open velcro, hydrolase; 2.00A {Pyrococcus furiosus}
Probab=98.66 E-value=7.9e-07 Score=65.37 Aligned_cols=134 Identities=13% Similarity=0.099 Sum_probs=83.5
Q ss_pred cceeEEEECCCCCCcEEEEEe---------CCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----
Q psy13207 26 TSVTDVKFGPKQLGLVLATCA---------ADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI---- 92 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~---------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 92 (197)
..+....+ + |+.++... .++.|.+|++.+++.. .+ ..+..+.|+|+|+.++..
T Consensus 15 ~~~~~~~~--d--G~~i~~~~~~~~~~~~~~~~~l~~~d~~~~~~~-~l---------~~~~~~~~SpDg~~la~~~~~~ 80 (347)
T 2gop_A 15 AYLSDPRT--K--GELVAYVLTKANLKDNKYENTIVIENLKNNARR-FI---------ENATMPRISPDGKKIAFMRANE 80 (347)
T ss_dssp CEEEEEEE--E--TTEEEEEEEEEETTTTEEEEEEEEEETTTCCEE-EE---------ESCEEEEECTTSSEEEEEEEET
T ss_pred EEcccceE--C--CcEEEEEEeecCcccCCccceEEEEeCCCCceE-Ec---------ccCCCeEECCCCCEEEEEEecc
Confidence 45677777 6 77776542 3678999998876421 11 357789999999987543
Q ss_pred ------eEEEE-----eeEecccCCCceeEEEEcCCCeEEEEeeC---------------------------CCeEEEEE
Q psy13207 93 ------SIMYE-----AHSINAEHKDLIHDVAYDYYGLRMATCSS---------------------------DQNIKVTR 134 (197)
Q Consensus 93 ------~~~~~-----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~---------------------------d~~i~~~d 134 (197)
+.+|+ ...+. .+.. +..++|+|+.-.|+.++. ...|.+||
T Consensus 81 ~~~~~~l~~~~~~~g~~~~l~-~~~~-~~~~~wspdg~~l~~~~~~~~~~~~~~~~~~~~~~~~g~~~~~~~~~~l~~~d 158 (347)
T 2gop_A 81 EKKVSEIWVADLETLSSKKIL-EAKN-IRSLEWNEDSRKLLIVGFKRREDEDFIFEDDVPAWFDDLGFFDGEKTTFWIFD 158 (347)
T ss_dssp TTTEEEEEEEETTTTEEEEEE-EESE-EEEEEECTTSSEEEEEEECCCC---------CCCC---------CEEEEEEEE
T ss_pred CCCcceEEEEECCCCceEEEE-cCCC-ccceeECCCCCEEEEEEccCCCcCCcEEEcccceeecCcccccCccceEEEEE
Confidence 44555 22232 2333 889999944322255542 25688899
Q ss_pred ccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC-------cEEEEEcC
Q psy13207 135 DVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG-------CVRLWKLK 183 (197)
Q Consensus 135 ~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg-------~i~iw~~~ 183 (197)
+.+ ++.+..+.. . .+..++|+|+| +++++..++ ...+|.++
T Consensus 159 ~~~-----~~~~~~l~~-~-~~~~~~~spdg-~~~~~~~~~~~~~~~~~~~l~~~d 206 (347)
T 2gop_A 159 TES-----EEVIEEFEK-P-RFSSGIWHRDK-IVVNVPHREIIPQYFKFWDIYIWE 206 (347)
T ss_dssp TTT-----TEEEEEEEE-E-TTCEEEEETTE-EEEEEECCCSSCCSSCCEEEEEEE
T ss_pred CCC-----CeEEeeecC-C-CcccccCCCCe-EEEEEecccccccccccccEEEeC
Confidence 875 333233333 3 67889999999 887776542 44566554
No 196
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.63 E-value=1.7e-05 Score=56.78 Aligned_cols=150 Identities=10% Similarity=-0.000 Sum_probs=99.2
Q ss_pred ecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEE
Q psy13207 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIM 95 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~ 95 (197)
+..+...+.++.+.++ |+++++...++.|..||.. ++ ...+... .....+..+++++++..+++. +..
T Consensus 10 ~~~~~~~~~~i~~d~~--g~l~v~~~~~~~v~~~d~~-~~-~~~~~~~---~~~~~~~~i~~~~~g~l~v~~~~~~~i~~ 82 (299)
T 2z2n_A 10 LTNQDTGPYGITVSDK--GKVWITQHKANMISCINLD-GK-ITEYPLP---TPDAKVMCLTISSDGEVWFTENAANKIGR 82 (299)
T ss_dssp CCSSSCCEEEEEECTT--SCEEEEETTTTEEEEECTT-CC-EEEEECS---STTCCEEEEEECTTSCEEEEETTTTEEEE
T ss_pred CCCcCCCccceEECCC--CCEEEEecCCCcEEEEcCC-CC-eEEecCC---cccCceeeEEECCCCCEEEeCCCCCeEEE
Confidence 4455678999999998 8888777778899999987 33 2111111 124568899999998876542 566
Q ss_pred EE----eeEecc-cCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEE
Q psy13207 96 YE----AHSINA-EHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVAS 170 (197)
Q Consensus 96 ~~----~~~~~~-~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~ 170 (197)
|+ +..+.. .....+..+++.++..++++...++.|.+||. +. .............+..++++|+|++.++
T Consensus 83 ~~~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~d~-~g----~~~~~~~~~~~~~~~~i~~~~~g~l~v~ 157 (299)
T 2z2n_A 83 ITKKGIIKEYTLPNPDSAPYGITEGPNGDIWFTEMNGNRIGRITD-DG----KIREYELPNKGSYPSFITLGSDNALWFT 157 (299)
T ss_dssp ECTTSCEEEEECSSTTCCEEEEEECTTSCEEEEETTTTEEEEECT-TC----CEEEEECSSTTCCEEEEEECTTSCEEEE
T ss_pred ECCCCcEEEEeCCCcCCCceeeEECCCCCEEEEecCCceEEEECC-CC----CEEEecCCCCCCCCceEEEcCCCCEEEE
Confidence 66 222220 23456888998843322266666789999987 31 1111122233456889999999988887
Q ss_pred EeCCCcEEEEEc
Q psy13207 171 SGDDGCVRLWKL 182 (197)
Q Consensus 171 ~~~dg~i~iw~~ 182 (197)
...++.|..||.
T Consensus 158 ~~~~~~i~~~~~ 169 (299)
T 2z2n_A 158 ENQNNAIGRITE 169 (299)
T ss_dssp ETTTTEEEEECT
T ss_pred eCCCCEEEEEcC
Confidence 777789999988
No 197
>2xdw_A Prolyl endopeptidase; alpha/beta-hydrolase, amnesia, beta-propeller, hydrolase, in; HET: PHQ TAM; 1.35A {Sus scrofa} PDB: 1qfm_A 1qfs_A* 1h2w_A* 3eq7_A* 3eq8_A* 3eq9_A* 1e8m_A* 1e8n_A 1h2z_A 1uoo_A 1uop_A 1uoq_A 1o6f_A 1h2x_A 1h2y_A* 1o6g_A 1vz3_A 1e5t_A 1vz2_A 3ddu_A*
Probab=98.57 E-value=1.2e-05 Score=65.17 Aligned_cols=149 Identities=9% Similarity=-0.058 Sum_probs=93.9
Q ss_pred CCcceeEEEECCCCCCcEEEEEeC-----CCcEEEEEcCC------cc-cccceeccceeccCCCeeeEEEccCCCcccc
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAA-----DGLVRIYEAPD------VM-NLSQWCLQHEVACPTLASCLTWNHSFSRFNS 91 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~-----dg~v~iw~~~~------~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 91 (197)
|...+..+.|+|+ |++|+.++. +..|.+||+.+ +. ....+. .....+. ..|+|+++.++.
T Consensus 231 ~~~~~~~~~~SpD--g~~l~~~~~~~~~~~~~l~~~d~~~~~~~~~~~~~~~~l~-----~~~~~~~-~~~s~dg~~l~~ 302 (710)
T 2xdw_A 231 EPKWMGGAELSDD--GRYVLLSIREGCDPVNRLWYCDLQQESNGITGILKWVKLI-----DNFEGEY-DYVTNEGTVFTF 302 (710)
T ss_dssp CTTCEEEEEECTT--SCEEEEEEECSSSSCCEEEEEEGGGSSSSSCSSCCCEEEE-----CSSSSCE-EEEEEETTEEEE
T ss_pred CCeEEEEEEEcCC--CCEEEEEEEccCCCccEEEEEECcccccccCCccceEEee-----CCCCcEE-EEEeccCCEEEE
Confidence 4556789999999 888877664 67899999876 32 111111 1122222 257888876532
Q ss_pred ---------eeEEEEe--------eEecccCCC--ceeEEEEcCCCeEEEEeeCCCeE--EEEEccCCcccceeeeeeec
Q psy13207 92 ---------ISIMYEA--------HSINAEHKD--LIHDVAYDYYGLRMATCSSDQNI--KVTRDVMGTRFDIETIGNFE 150 (197)
Q Consensus 92 ---------~~~~~~~--------~~~~~~~~~--~i~~~~~~~~~~~~~s~~~d~~i--~~~d~~~~~~~~~~~~~~~~ 150 (197)
.+.+|++ ..+. .|.. .+..++|++...++++...|+.. .+|++.+ +..+..+.
T Consensus 303 ~s~~~~~~~~l~~~d~~~~~~~~~~~l~-~~~~~~~~~~~~~~~~~~lv~~~~~~g~~~l~~~~~~~-----g~~~~~l~ 376 (710)
T 2xdw_A 303 KTNRHSPNYRLINIDFTDPEESKWKVLV-PEHEKDVLEWVACVRSNFLVLCYLHDVKNTLQLHDLAT-----GALLKIFP 376 (710)
T ss_dssp EECTTCTTCEEEEEETTSCCGGGCEEEE-CCCSSCEEEEEEEETTTEEEEEEEETTEEEEEEEETTT-----CCEEEEEC
T ss_pred EECCCCCCCEEEEEeCCCCCcccceecc-CCCCCCeEEEEEEEcCCEEEEEEEECCEEEEEEEECCC-----CCEEEecC
Confidence 1566662 3444 4443 57788888333333777778755 4556533 44455566
Q ss_pred CceecEEEEEEccCCCEEEEE-e---CCCcEEEEEcCCCc
Q psy13207 151 DHYCTVWRVSWNITGTIVASS-G---DDGCVRLWKLKKKR 186 (197)
Q Consensus 151 ~h~~~v~~~~~~p~~~~l~~~-~---~dg~i~iw~~~~~~ 186 (197)
.+...+..++++|+++.++.. + ..++++.||+.+++
T Consensus 377 ~~~~~v~~~~~s~d~~~l~~~~ss~~~P~~i~~~d~~tg~ 416 (710)
T 2xdw_A 377 LEVGSVVGYSGQKKDTEIFYQFTSFLSPGIIYHCDLTKEE 416 (710)
T ss_dssp CCSSEEEEEECCTTCSEEEEEEECSSCCCEEEEEETTSSS
T ss_pred CCCceEEEEecCCCCCEEEEEEeCCCCCCEEEEEECCCCc
Confidence 667788899999998766533 2 34789999998765
No 198
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.57 E-value=8.9e-06 Score=59.70 Aligned_cols=151 Identities=9% Similarity=-0.109 Sum_probs=92.4
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc------eeEEEE-
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS------ISIMYE- 97 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~- 97 (197)
......++++++ +..+++...++.|.+||..+.+....+..............+++ ..+..+++ .+.++|
T Consensus 83 ~~~p~~i~~~~~--g~lyv~~~~~~~v~~iD~~t~~~~~~i~~g~~~~~~~~p~~i~~-~~~~lyv~~~~~~~~v~viD~ 159 (328)
T 3dsm_A 83 FTSPRYIHFLSD--EKAYVTQIWDYRIFIINPKTYEITGYIECPDMDMESGSTEQMVQ-YGKYVYVNCWSYQNRILKIDT 159 (328)
T ss_dssp CSSEEEEEEEET--TEEEEEEBSCSEEEEEETTTTEEEEEEECTTCCTTTCBCCCEEE-ETTEEEEEECTTCCEEEEEET
T ss_pred CCCCcEEEEeCC--CeEEEEECCCCeEEEEECCCCeEEEEEEcCCccccCCCcceEEE-ECCEEEEEcCCCCCEEEEEEC
Confidence 356788999888 86666665899999999988765433332110000114455666 33333322 267777
Q ss_pred -----eeEecccCCCceeEEEEcCCCeEEEEeeCC----------CeEEEEEccCCcccceeeeeeecCc-eecEEEEEE
Q psy13207 98 -----AHSINAEHKDLIHDVAYDYYGLRMATCSSD----------QNIKVTRDVMGTRFDIETIGNFEDH-YCTVWRVSW 161 (197)
Q Consensus 98 -----~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d----------~~i~~~d~~~~~~~~~~~~~~~~~h-~~~v~~~~~ 161 (197)
+..+. . ......++++++.-+++++..+ +.|.++|..+ .+....+... ......+++
T Consensus 160 ~t~~~~~~i~-~-g~~p~~i~~~~dG~l~v~~~~~~~~~~~~~~~~~v~~id~~t-----~~v~~~~~~~~g~~p~~la~ 232 (328)
T 3dsm_A 160 ETDKVVDELT-I-GIQPTSLVMDKYNKMWTITDGGYEGSPYGYEAPSLYRIDAET-----FTVEKQFKFKLGDWPSEVQL 232 (328)
T ss_dssp TTTEEEEEEE-C-SSCBCCCEECTTSEEEEEBCCBCTTCSSCBCCCEEEEEETTT-----TEEEEEEECCTTCCCEEEEE
T ss_pred CCCeEEEEEE-c-CCCccceEEcCCCCEEEEECCCccCCccccCCceEEEEECCC-----CeEEEEEecCCCCCceeEEE
Confidence 23333 1 2345677787433333555544 7899999876 3444333221 235789999
Q ss_pred ccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 162 NITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 162 ~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
+|+++.|+.+.. .|.+||..+++.
T Consensus 233 ~~d~~~lyv~~~--~v~~~d~~t~~~ 256 (328)
T 3dsm_A 233 NGTRDTLYWINN--DIWRMPVEADRV 256 (328)
T ss_dssp CTTSCEEEEESS--SEEEEETTCSSC
T ss_pred ecCCCEEEEEcc--EEEEEECCCCce
Confidence 999998887754 899999987653
No 199
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.49 E-value=3.2e-05 Score=56.67 Aligned_cols=153 Identities=7% Similarity=-0.071 Sum_probs=93.1
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---------eEE
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI---------SIM 95 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---------~~~ 95 (197)
...+.++.|+|+ |+++++. .+ .|.+||..+++... +.....-.....+..+.++|+++.+++. ..+
T Consensus 89 ~~~v~~i~~~~d--g~l~v~~-~~-gl~~~d~~~g~~~~-~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l 163 (326)
T 2ghs_A 89 PFMGSALAKISD--SKQLIAS-DD-GLFLRDTATGVLTL-HAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSI 163 (326)
T ss_dssp SSCEEEEEEEET--TEEEEEE-TT-EEEEEETTTCCEEE-EECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEE
T ss_pred CCcceEEEEeCC--CeEEEEE-CC-CEEEEECCCCcEEE-EeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEE
Confidence 457899999998 8877754 34 48899987664321 1100000012357889999999876543 245
Q ss_pred EEee-----EecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEcc--CC-cccceeeeeeecCceecEEEEEEccCCC
Q psy13207 96 YEAH-----SINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDV--MG-TRFDIETIGNFEDHYCTVWRVSWNITGT 166 (197)
Q Consensus 96 ~~~~-----~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~--~~-~~~~~~~~~~~~~h~~~v~~~~~~p~~~ 166 (197)
|.+. .+. .+......++|+++. .++++.+.++.|.+||.. ++ .......+..+.........++++++|+
T Consensus 164 ~~~~~g~~~~~~-~~~~~~~~i~~s~dg~~lyv~~~~~~~I~~~d~~~~~Gl~~~~~~~~~~~~~~~~~p~gi~~d~~G~ 242 (326)
T 2ghs_A 164 YHVAKGKVTKLF-ADISIPNSICFSPDGTTGYFVDTKVNRLMRVPLDARTGLPTGKAEVFIDSTGIKGGMDGSVCDAEGH 242 (326)
T ss_dssp EEEETTEEEEEE-EEESSEEEEEECTTSCEEEEEETTTCEEEEEEBCTTTCCBSSCCEEEEECTTSSSEEEEEEECTTSC
T ss_pred EEEeCCcEEEee-CCCcccCCeEEcCCCCEEEEEECCCCEEEEEEcccccCCcccCceEEEECCCCCCCCCeeEECCCCC
Confidence 5421 221 222346788998443 222455567899999985 32 1111122333333344567899999999
Q ss_pred EEEEEeCCCcEEEEEcC
Q psy13207 167 IVASSGDDGCVRLWKLK 183 (197)
Q Consensus 167 ~l~~~~~dg~i~iw~~~ 183 (197)
+.++...++.|..||..
T Consensus 243 lwva~~~~~~v~~~d~~ 259 (326)
T 2ghs_A 243 IWNARWGEGAVDRYDTD 259 (326)
T ss_dssp EEEEEETTTEEEEECTT
T ss_pred EEEEEeCCCEEEEECCC
Confidence 88877677899999873
No 200
>2z2n_A Virginiamycin B lyase; seven-bladed beta-propeller, antibiotic resistance, E mechanism, virginiamycin B hydrolase streptogramin; HET: MSE; 1.65A {Staphylococcus aureus} PDB: 2z2o_A 2z2p_A*
Probab=98.44 E-value=6.2e-05 Score=53.76 Aligned_cols=148 Identities=7% Similarity=-0.083 Sum_probs=96.0
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE-
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE- 97 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~- 97 (197)
....+.++.+.|+ |.++++...++.|..||. +++.. .+.. ......+..+++.+++..+++. +..|+
T Consensus 97 ~~~~~~~i~~~~~--g~l~v~~~~~~~i~~~d~-~g~~~-~~~~---~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~ 169 (299)
T 2z2n_A 97 PDSAPYGITEGPN--GDIWFTEMNGNRIGRITD-DGKIR-EYEL---PNKGSYPSFITLGSDNALWFTENQNNAIGRITE 169 (299)
T ss_dssp TTCCEEEEEECTT--SCEEEEETTTTEEEEECT-TCCEE-EEEC---SSTTCCEEEEEECTTSCEEEEETTTTEEEEECT
T ss_pred cCCCceeeEECCC--CCEEEEecCCceEEEECC-CCCEE-EecC---CCCCCCCceEEEcCCCCEEEEeCCCCEEEEEcC
Confidence 3456889999998 888888777889999998 43221 1111 0113467899999998766532 55565
Q ss_pred ---eeEec-ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeC
Q psy13207 98 ---AHSIN-AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGD 173 (197)
Q Consensus 98 ---~~~~~-~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~ 173 (197)
+..+. ......+..++++++.-++++...++.|.+||. +.. .. ......+...+.+++++++|+++++...
T Consensus 170 ~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~-~g~---~~-~~~~~~~~~~~~~i~~~~~g~l~v~~~~ 244 (299)
T 2z2n_A 170 SGDITEFKIPTPASGPVGITKGNDDALWFVEIIGNKIGRITT-SGE---IT-EFKIPTPNARPHAITAGAGIDLWFTEWG 244 (299)
T ss_dssp TCCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECT-TCC---EE-EEECSSTTCCEEEEEECSTTCEEEEETT
T ss_pred CCcEEEeeCCCCCCcceeEEECCCCCEEEEccCCceEEEECC-CCc---EE-EEECCCCCCCceeEEECCCCCEEEeccC
Confidence 22221 133456788988833222255556789999998 421 11 1223334567889999999997777667
Q ss_pred CCcEEEEEcC
Q psy13207 174 DGCVRLWKLK 183 (197)
Q Consensus 174 dg~i~iw~~~ 183 (197)
++.|..||..
T Consensus 245 ~~~i~~~d~~ 254 (299)
T 2z2n_A 245 ANKIGRLTSN 254 (299)
T ss_dssp TTEEEEEETT
T ss_pred CceEEEECCC
Confidence 8899999973
No 201
>3dsm_A Uncharacterized protein bacuni_02894; seven_blated beta propeller, structural genomics, PSI-2, Pro structure initiative; 1.90A {Bacteroides uniformis}
Probab=98.43 E-value=7.5e-06 Score=60.12 Aligned_cols=146 Identities=3% Similarity=-0.043 Sum_probs=94.8
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE----
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE---- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~---- 97 (197)
....+.+.. +..+++...++.|.++|..+.+.+.++ ........++++++++.+++. +.+||
T Consensus 45 ~~~~i~~~~---~~lyv~~~~~~~v~viD~~t~~~~~~i------~~~~~p~~i~~~~~g~lyv~~~~~~~v~~iD~~t~ 115 (328)
T 3dsm_A 45 VAQSMVIRD---GIGWIVVNNSHVIFAIDINTFKEVGRI------TGFTSPRYIHFLSDEKAYVTQIWDYRIFIINPKTY 115 (328)
T ss_dssp CEEEEEEET---TEEEEEEGGGTEEEEEETTTCCEEEEE------ECCSSEEEEEEEETTEEEEEEBSCSEEEEEETTTT
T ss_pred cceEEEEEC---CEEEEEEcCCCEEEEEECcccEEEEEc------CCCCCCcEEEEeCCCeEEEEECCCCeEEEEECCCC
Confidence 456777743 566777777899999999988765443 224567889998888654433 67777
Q ss_pred --eeEecccC----CCceeEEEEcCCCeEEEEee-CCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEE
Q psy13207 98 --AHSINAEH----KDLIHDVAYDYYGLRMATCS-SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVAS 170 (197)
Q Consensus 98 --~~~~~~~~----~~~i~~~~~~~~~~~~~s~~-~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~ 170 (197)
...+..+. ......+++.+..+ +++.. .++.|.++|..+ .+.+..+... .....++++|+|+++++
T Consensus 116 ~~~~~i~~g~~~~~~~~p~~i~~~~~~l-yv~~~~~~~~v~viD~~t-----~~~~~~i~~g-~~p~~i~~~~dG~l~v~ 188 (328)
T 3dsm_A 116 EITGYIECPDMDMESGSTEQMVQYGKYV-YVNCWSYQNRILKIDTET-----DKVVDELTIG-IQPTSLVMDKYNKMWTI 188 (328)
T ss_dssp EEEEEEECTTCCTTTCBCCCEEEETTEE-EEEECTTCCEEEEEETTT-----TEEEEEEECS-SCBCCCEECTTSEEEEE
T ss_pred eEEEEEEcCCccccCCCcceEEEECCEE-EEEcCCCCCEEEEEECCC-----CeEEEEEEcC-CCccceEEcCCCCEEEE
Confidence 22333111 11455667764444 14443 488999999976 3444444322 23467899999997777
Q ss_pred EeCC----------CcEEEEEcCCCcch
Q psy13207 171 SGDD----------GCVRLWKLKKKRKK 188 (197)
Q Consensus 171 ~~~d----------g~i~iw~~~~~~~~ 188 (197)
+..+ +.|.++|..+.+..
T Consensus 189 ~~~~~~~~~~~~~~~~v~~id~~t~~v~ 216 (328)
T 3dsm_A 189 TDGGYEGSPYGYEAPSLYRIDAETFTVE 216 (328)
T ss_dssp BCCBCTTCSSCBCCCEEEEEETTTTEEE
T ss_pred ECCCccCCccccCCceEEEEECCCCeEE
Confidence 6654 78999999876543
No 202
>2ghs_A AGR_C_1268P; regucalcin, structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PSI-2; 1.55A {Agrobacterium tumefaciens str} SCOP: b.68.6.1
Probab=98.40 E-value=9.9e-05 Score=54.05 Aligned_cols=141 Identities=9% Similarity=-0.065 Sum_probs=86.6
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---eEEEE-----e
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI---SIMYE-----A 98 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~-----~ 98 (197)
-..+..|+|+. +.++++...++.|..||..+++.. .+ .....+.++.|+++++.+++. +.+|+ +
T Consensus 50 ~~egp~~~~~~-~~l~~~d~~~~~i~~~d~~~~~~~-~~------~~~~~v~~i~~~~dg~l~v~~~~gl~~~d~~~g~~ 121 (326)
T 2ghs_A 50 LGEGPTFDPAS-GTAWWFNILERELHELHLASGRKT-VH------ALPFMGSALAKISDSKQLIASDDGLFLRDTATGVL 121 (326)
T ss_dssp BEEEEEEETTT-TEEEEEEGGGTEEEEEETTTTEEE-EE------ECSSCEEEEEEEETTEEEEEETTEEEEEETTTCCE
T ss_pred CCcCCeEeCCC-CEEEEEECCCCEEEEEECCCCcEE-EE------ECCCcceEEEEeCCCeEEEEECCCEEEEECCCCcE
Confidence 45678899962 566777778899999998775421 11 114578899999999877653 67777 2
Q ss_pred eEeccc----CCCceeEEEEcCCCeEEEEeeC------CCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEE
Q psy13207 99 HSINAE----HKDLIHDVAYDYYGLRMATCSS------DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIV 168 (197)
Q Consensus 99 ~~~~~~----~~~~i~~~~~~~~~~~~~s~~~------d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 168 (197)
..+... ....++.++++++.-++++... .+.|..++ + .+.. .+..+......++|+|+++.+
T Consensus 122 ~~~~~~~~~~~~~~~~~i~~d~~G~l~v~~~~~~~~~~~~~l~~~~--~-----g~~~-~~~~~~~~~~~i~~s~dg~~l 193 (326)
T 2ghs_A 122 TLHAELESDLPGNRSNDGRMHPSGALWIGTMGRKAETGAGSIYHVA--K-----GKVT-KLFADISIPNSICFSPDGTTG 193 (326)
T ss_dssp EEEECSSTTCTTEEEEEEEECTTSCEEEEEEETTCCTTCEEEEEEE--T-----TEEE-EEEEEESSEEEEEECTTSCEE
T ss_pred EEEeeCCCCCCCCCCCCEEECCCCCEEEEeCCCcCCCCceEEEEEe--C-----CcEE-EeeCCCcccCCeEEcCCCCEE
Confidence 222201 1235788899833221243322 24455555 2 1211 111223356789999999876
Q ss_pred EEE-eCCCcEEEEEcC
Q psy13207 169 ASS-GDDGCVRLWKLK 183 (197)
Q Consensus 169 ~~~-~~dg~i~iw~~~ 183 (197)
+.+ +.++.|.+|++.
T Consensus 194 yv~~~~~~~I~~~d~~ 209 (326)
T 2ghs_A 194 YFVDTKVNRLMRVPLD 209 (326)
T ss_dssp EEEETTTCEEEEEEBC
T ss_pred EEEECCCCEEEEEEcc
Confidence 554 567899999986
No 203
>1yr2_A Prolyl oligopeptidase; prolyl endopeptidase, mechanistic study, celiac sprue, hydro; 1.80A {Novosphingobium capsulatum}
Probab=98.36 E-value=9e-06 Score=66.18 Aligned_cols=108 Identities=6% Similarity=-0.095 Sum_probs=69.0
Q ss_pred CeeeEEEccCCCcccce----------eEEEEeeE---ec-ccCCCceeEEEEcCCCeEEEEeeCCC-------------
Q psy13207 76 LASCLTWNHSFSRFNSI----------SIMYEAHS---IN-AEHKDLIHDVAYDYYGLRMATCSSDQ------------- 128 (197)
Q Consensus 76 ~~~~~~~~~~~~~~~~~----------~~~~~~~~---~~-~~~~~~i~~~~~~~~~~~~~s~~~d~------------- 128 (197)
.+..++|+|+|++++.+ +++||+.. +. ..+...+..++|+++ -.|+.++.++
T Consensus 164 ~~~~~~~SPDG~~la~~~~~~G~e~~~i~v~dl~tg~~~~~~~~~~~~~~~~wspD-~~l~~~~~~~~~~~~~~~~~~~~ 242 (741)
T 1yr2_A 164 ALDAWAASDDGRLLAYSVQDGGSDWRTVKFVGVADGKPLADELKWVKFSGLAWLGN-DALLYSRFAEPKEGQAFQALNYN 242 (741)
T ss_dssp EEEEEEECTTSSEEEEEEEETTCSEEEEEEEETTTCCEEEEEEEEEESCCCEESTT-SEEEEEECCCC--------CCCC
T ss_pred EEEeEEECCCCCEEEEEEcCCCCceEEEEEEECCCCCCCCccCCCceeccEEEECC-CEEEEEEecCcccccccccCCCC
Confidence 57889999999998643 56777111 11 011122356788876 4445555544
Q ss_pred -eEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC-----cEEEEEcCCC
Q psy13207 129 -NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG-----CVRLWKLKKK 185 (197)
Q Consensus 129 -~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg-----~i~iw~~~~~ 185 (197)
.|++|++.+.... ...+.....+...+..+.|+|||++|+..+.++ .|++||+.++
T Consensus 243 ~~v~~~~lgt~~~~-~~lv~~~~~~~~~~~~~~~SpDG~~l~~~~~~~~~~~~~l~~~d~~~~ 304 (741)
T 1yr2_A 243 QTVWLHRLGTPQSA-DQPVFATPELPKRGHGASVSSDGRWVVITSSEGTDPVNTVHVARVTNG 304 (741)
T ss_dssp CEEEEEETTSCGGG-CEEEECCTTCTTCEEEEEECTTSCEEEEEEECTTCSCCEEEEEEEETT
T ss_pred CEEEEEECCCCchh-CEEEeccCCCCeEEEEEEECCCCCEEEEEEEccCCCcceEEEEECCCC
Confidence 3888988653211 233444444444688999999999998887554 7999999765
No 204
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.35 E-value=4.4e-05 Score=57.86 Aligned_cols=146 Identities=14% Similarity=-0.005 Sum_probs=90.8
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc-------eeEEEE-
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS-------ISIMYE- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~- 97 (197)
.....++|+|+ ++++++...++.|+.||..++....... ...... ++|+++++.+.. .+..++
T Consensus 131 ~~P~~la~d~~--g~lyv~d~~~~~I~~id~~~g~~~~~~~------~~~~~~-ia~~~~g~~l~~~d~~~~~~I~~~d~ 201 (409)
T 3hrp_A 131 KYMWGIAAVGN--NTVLAYQRDDPRVRLISVDDNKVTTVHP------GFKGGK-PAVTKDKQRVYSIGWEGTHTVYVYMK 201 (409)
T ss_dssp CCEEEEEECST--TEEEEEETTTTEEEEEETTTTEEEEEEE------TCCBCB-CEECTTSSEEEEEBSSTTCEEEEEEG
T ss_pred CCceEEEEeCC--CCEEEEecCCCcEEEEECCCCEEEEeec------cCCCCc-eeEecCCCcEEEEecCCCceEEEEEc
Confidence 46789999998 8888888888999999998654321111 122233 899999986533 244444
Q ss_pred -----eeEe---cccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEccCCcccceeeeee--ecCceecE--EEEEEccC
Q psy13207 98 -----AHSI---NAEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFDIETIGN--FEDHYCTV--WRVSWNIT 164 (197)
Q Consensus 98 -----~~~~---~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~--~~~h~~~v--~~~~~~p~ 164 (197)
...+ .......+.++++++ +..+ ..+..++.|+.||..+.. ...+.. ..++...- ..++|+|+
T Consensus 202 ~~~~~~~~~g~~~~~~~~~p~~iav~p~~g~l-yv~d~~~~I~~~d~~~~~---~~~~~~~~~~g~~~~~P~~~ia~~p~ 277 (409)
T 3hrp_A 202 ASGWAPTRIGQLGSTFSGKIGAVALDETEEWL-YFVDSNKNFGRFNVKTQE---VTLIKQLELSGSLGTNPGPYLIYYFV 277 (409)
T ss_dssp GGTTCEEEEEECCTTSCSCCCBCEECTTSSEE-EEECTTCEEEEEETTTCC---EEEEEECCCCSCCCCSSCCEEEEETT
T ss_pred CCCceeEEeeeccchhcCCcEEEEEeCCCCeE-EEEECCCcEEEEECCCCC---EEEEecccccCCCCCCccccEEEeCC
Confidence 1222 102445678888885 3332 336668899999987521 111111 12222222 28999995
Q ss_pred -CCEEEEEeCCCcEEEEEcCC
Q psy13207 165 -GTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 165 -~~~l~~~~~dg~i~iw~~~~ 184 (197)
+.++++...++.|+.|+...
T Consensus 278 ~g~lyv~d~~~~~I~~~~~~g 298 (409)
T 3hrp_A 278 DSNFYMSDQNLSSVYKITPDG 298 (409)
T ss_dssp TTEEEEEETTTTEEEEECTTC
T ss_pred CCEEEEEeCCCCEEEEEecCC
Confidence 66666667788999998753
No 205
>3g4e_A Regucalcin; six bladed beta-propeller, gluconolcatonase, organophosphate hydrolase, calcium bound, alternative splicing, cytoplasm, phosphoprotein; 1.42A {Homo sapiens} PDB: 3g4h_B
Probab=98.35 E-value=5.3e-05 Score=54.65 Aligned_cols=133 Identities=11% Similarity=0.094 Sum_probs=82.4
Q ss_pred cceeEEEECCCCCCcEEEEEeCC---------CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAAD---------GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI---- 92 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~d---------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---- 92 (197)
..++++.++|+ |+++++...+ ..-.||.+........ ..........++|+|+++.+..+
T Consensus 98 ~~~~di~~d~d--G~l~~~~~~~~~~~~~~~~~~~~l~~~d~~g~~~~-----~~~~~~~pngi~~spdg~~lyv~~~~~ 170 (297)
T 3g4e_A 98 NRFNDGKVDPA--GRYFAGTMAEETAPAVLERHQGALYSLFPDHHVKK-----YFDQVDISNGLDWSLDHKIFYYIDSLS 170 (297)
T ss_dssp EEEEEEEECTT--SCEEEEEEECCSBTTBCCTTCEEEEEECTTSCEEE-----EEEEESBEEEEEECTTSCEEEEEEGGG
T ss_pred CCCCCEEECCC--CCEEEecCCcccccccccCCCcEEEEEECCCCEEE-----EeeccccccceEEcCCCCEEEEecCCC
Confidence 45789999998 8877655322 3345665543221111 11112345789999999865322
Q ss_pred --eEEEEee----------Eec--ccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecE
Q psy13207 93 --SIMYEAH----------SIN--AEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTV 156 (197)
Q Consensus 93 --~~~~~~~----------~~~--~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v 156 (197)
+..|++. .+. ..+......+++. ++.. ++....+.|.+||..+ ++.+..+..+...+
T Consensus 171 ~~i~~~~~d~~~G~~~~~~~~~~~~~~~~~p~g~~~d~~G~lw--va~~~~~~v~~~d~~t-----G~~~~~i~~p~~~~ 243 (297)
T 3g4e_A 171 YSVDAFDYDLQTGQISNRRSVYKLEKEEQIPDGMCIDAEGKLW--VACYNGGRVIRLDPVT-----GKRLQTVKLPVDKT 243 (297)
T ss_dssp TEEEEEEECTTTCCEEEEEEEEECCGGGCEEEEEEEBTTSCEE--EEEETTTEEEEECTTT-----CCEEEEEECSSSBE
T ss_pred CcEEEEeccCCCCcccCcEEEEECCCCCCCCCeeEECCCCCEE--EEEcCCCEEEEEcCCC-----ceEEEEEECCCCCc
Confidence 5666521 111 0223457788887 4444 6666778899999875 55666666666678
Q ss_pred EEEEEc-cCCCEEEEEe
Q psy13207 157 WRVSWN-ITGTIVASSG 172 (197)
Q Consensus 157 ~~~~~~-p~~~~l~~~~ 172 (197)
++++|. |+++.|+.++
T Consensus 244 t~~~f~g~d~~~L~vt~ 260 (297)
T 3g4e_A 244 TSCCFGGKNYSEMYVTC 260 (297)
T ss_dssp EEEEEESGGGCEEEEEE
T ss_pred eEEEEeCCCCCEEEEEc
Confidence 999998 8887665554
No 206
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.35 E-value=3e-06 Score=68.53 Aligned_cols=135 Identities=11% Similarity=0.066 Sum_probs=77.7
Q ss_pred CCCcceeEEEECCCCCCcEEEE-----EeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEE
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLAT-----CAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYE 97 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s-----~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (197)
+|...+..+.|||+ |++||- |+....|++||+.+++.+.. .+. ......++|+ +++.|+..
T Consensus 126 ~~~~~l~~~~~SpD--g~~lAy~~~~~G~~~~~i~v~dl~tg~~~~~-----~~~-~~k~~~~~Ws-Dg~~l~y~----- 191 (693)
T 3iuj_A 126 DGTTALDQLSFSRD--GRILAYSLSLAGSDWREIHLMDVESKQPLET-----PLK-DVKFSGISWL-GNEGFFYS----- 191 (693)
T ss_dssp TSCCEEEEEEECTT--SSEEEEEEECSSCCEEEEEEEETTTCSEEEE-----EEE-EEESCCCEEE-TTTEEEEE-----
T ss_pred CCcEEEEEEEECCC--CCEEEEEEecCCCceEEEEEEECCCCCCCcc-----ccC-CceeccEEEe-CCCEEEEE-----
Confidence 46667889999999 988873 33346899999998764321 111 0112456677 66553221
Q ss_pred eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC-ceecEEEEEEccCCCEEEEEeC---
Q psy13207 98 AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED-HYCTVWRVSWNITGTIVASSGD--- 173 (197)
Q Consensus 98 ~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~-h~~~v~~~~~~p~~~~l~~~~~--- 173 (197)
..... . +..+ -.......|++|++.+... +...+..... |......+.|+|||++|+..+.
T Consensus 192 ------~~~~~-~-----~~~~--~~~~~~~~v~~~~lgt~~~-~~~~v~~~~~~~~~~~~~~~~SpDg~~l~~~~~~~~ 256 (693)
T 3iuj_A 192 ------SYDKP-D-----GSEL--SARTDQHKVYFHRLGTAQE-DDRLVFGAIPAQHHRYVGATVTEDDRFLLISAANST 256 (693)
T ss_dssp ------ESSCC-C--------------CCCCEEEEEETTSCGG-GCEEEESCSGGGCCSEEEEEECTTSCEEEEEEESSS
T ss_pred ------EecCc-c-----cccc--cccCCCcEEEEEECCCCcc-cceEEEecCCCCCeEEEEEEEcCCCCEEEEEEccCC
Confidence 00000 0 0000 1112335688999865321 1234444444 5566788999999998865442
Q ss_pred -CCcEEEEEcCCCc
Q psy13207 174 -DGCVRLWKLKKKR 186 (197)
Q Consensus 174 -dg~i~iw~~~~~~ 186 (197)
+..|+++|+.++.
T Consensus 257 ~~~~i~~~d~~~~~ 270 (693)
T 3iuj_A 257 SGNRLYVKDLSQEN 270 (693)
T ss_dssp SCCEEEEEETTSTT
T ss_pred CCcEEEEEECCCCC
Confidence 2589999987653
No 207
>1qks_A Cytochrome CD1 nitrite reductase; enzyme, oxidoreductase, denitrification, electron transport, periplasmic; HET: HEC DHE; 1.28A {Paracoccus pantotrophus} SCOP: a.3.1.2 b.70.2.1 PDB: 1aof_A* 1aoq_A* 1aom_A* 1e2r_A* 1hj5_A* 1h9x_A* 1h9y_A* 1hcm_A* 1hj3_A* 1hj4_A* 1dy7_A* 1gq1_A*
Probab=98.33 E-value=1.2e-05 Score=63.58 Aligned_cols=109 Identities=8% Similarity=-0.026 Sum_probs=74.6
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccCCCceeEEEEcCCC
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYG 118 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~ 118 (197)
+.++++...+++|.++|..+.+.+.++. ....+..+.|+++.
T Consensus 167 ~~~~V~~~~~~~V~viD~~t~~v~~~i~--------------------------------------~g~~p~~v~~SpDG 208 (567)
T 1qks_A 167 NLFSVTLRDAGQIALIDGSTYEIKTVLD--------------------------------------TGYAVHISRLSASG 208 (567)
T ss_dssp GEEEEEETTTTEEEEEETTTCCEEEEEE--------------------------------------CSSCEEEEEECTTS
T ss_pred ceEEEEeCCCCeEEEEECCCCeEEEEEe--------------------------------------CCCCccceEECCCC
Confidence 6677888899999999998875443222 11233455565332
Q ss_pred eEEEEeeCCCeEEEEEcc--CCcccceeeeeeecCceecEEEEEEc----cCCCEEEEEeC-CCcEEEEEcCCCcchhhh
Q psy13207 119 LRMATCSSDQNIKVTRDV--MGTRFDIETIGNFEDHYCTVWRVSWN----ITGTIVASSGD-DGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 119 ~~~~s~~~d~~i~~~d~~--~~~~~~~~~~~~~~~h~~~v~~~~~~----p~~~~l~~~~~-dg~i~iw~~~~~~~~~~~ 191 (197)
-++++++.|+.|.+||+. + .+.+..+.... ....++|+ |||++++++.. ++++.++|..+.+..+.+
T Consensus 209 r~lyv~~~dg~V~viD~~~~t-----~~~v~~i~~G~-~P~~ia~s~~~~pDGk~l~v~n~~~~~v~ViD~~t~~~~~~i 282 (567)
T 1qks_A 209 RYLFVIGRDGKVNMIDLWMKE-----PTTVAEIKIGS-EARSIETSKMEGWEDKYAIAGAYWPPQYVIMDGETLEPKKIQ 282 (567)
T ss_dssp CEEEEEETTSEEEEEETTSSS-----CCEEEEEECCS-EEEEEEECCSTTCTTTEEEEEEEETTEEEEEETTTCCEEEEE
T ss_pred CEEEEEcCCCeEEEEECCCCC-----CcEeEEEecCC-CCceeEEccccCCCCCEEEEEEccCCeEEEEECCCCcEEEEE
Confidence 222677889999999995 4 44455554433 34789999 69998888774 599999998887665543
No 208
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.31 E-value=0.00032 Score=50.01 Aligned_cols=149 Identities=5% Similarity=-0.120 Sum_probs=96.9
Q ss_pred cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEE
Q psy13207 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMY 96 (197)
Q Consensus 22 ~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~ 96 (197)
......+.++.+.++ |.++++...++.|..+|.. ++.. .+... .....+..+++.+++..+++. +..|
T Consensus 16 ~~~~~~p~~i~~d~~--g~l~v~~~~~~~v~~~~~~-~~~~-~~~~~---~~~~~~~~i~~~~~g~l~v~~~~~~~v~~~ 88 (300)
T 2qc5_A 16 SIPDSGPYGITSSED--GKVWFTQHKANKISSLDQS-GRIK-EFEVP---TPDAKVMCLIVSSLGDIWFTENGANKIGKL 88 (300)
T ss_dssp SSTTCCEEEEEECTT--SCEEEEETTTTEEEEECTT-SCEE-EEECS---STTCCEEEEEECTTSCEEEEETTTTEEEEE
T ss_pred CCCCCCcceeeECCC--CCEEEEcCCCCeEEEECCC-CceE-EEECC---CCCCcceeEEECCCCCEEEEecCCCeEEEE
Confidence 344567899999998 8888887788999999977 3321 12111 113567889999988765432 5666
Q ss_pred E----eeEec-ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEE
Q psy13207 97 E----AHSIN-AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASS 171 (197)
Q Consensus 97 ~----~~~~~-~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~ 171 (197)
+ ...+. ......+.++++.++.-++++...++.|..+|... ......+......+.++++.++|++.++.
T Consensus 89 d~~g~~~~~~~~~~~~~~~~i~~~~~g~l~v~~~~~~~i~~~~~~g-----~~~~~~~~~~~~~~~~i~~d~~g~l~v~~ 163 (300)
T 2qc5_A 89 SKKGGFTEYPLPQPDSGPYGITEGLNGDIWFTQLNGDRIGKLTADG-----TIYEYDLPNKGSYPAFITLGSDNALWFTE 163 (300)
T ss_dssp CTTSCEEEEECSSTTCCEEEEEECSTTCEEEEETTTTEEEEECTTS-----CEEEEECSSTTCCEEEEEECTTSSEEEEE
T ss_pred CCCCCeEEecCCCCCCCCccceECCCCCEEEEccCCCeEEEECCCC-----CEEEccCCCCCCCceeEEECCCCCEEEEe
Confidence 5 22222 02345688888883322226655678898898752 11111223234567899999999977777
Q ss_pred eCCCcEEEEEc
Q psy13207 172 GDDGCVRLWKL 182 (197)
Q Consensus 172 ~~dg~i~iw~~ 182 (197)
..++.|..++.
T Consensus 164 ~~~~~i~~~~~ 174 (300)
T 2qc5_A 164 NQNNSIGRITN 174 (300)
T ss_dssp TTTTEEEEECT
T ss_pred cCCCeEEEECC
Confidence 66788999987
No 209
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.31 E-value=7.4e-05 Score=54.10 Aligned_cols=149 Identities=7% Similarity=-0.084 Sum_probs=90.4
Q ss_pred ecCCCcceeEEEECCCCCCc-EEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eE
Q psy13207 21 LVDSRTSVTDVKFGPKQLGL-VLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SI 94 (197)
Q Consensus 21 ~~~h~~~v~~~~~~~~~~~~-~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~ 94 (197)
+...........|+|+ ++ ++++...++.|..|+.. ++ ...+. .....+..+.++++++.+++. +.
T Consensus 40 l~~~~~~~egp~~~~~--g~~l~~~d~~~~~i~~~~~~-g~-~~~~~-----~~~~~~~gl~~d~dG~l~v~~~~~~~v~ 110 (305)
T 3dr2_A 40 LYDQATWSEGPAWWEA--QRTLVWSDLVGRRVLGWRED-GT-VDVLL-----DATAFTNGNAVDAQQRLVHCEHGRRAIT 110 (305)
T ss_dssp EECCCSSEEEEEEEGG--GTEEEEEETTTTEEEEEETT-SC-EEEEE-----ESCSCEEEEEECTTSCEEEEETTTTEEE
T ss_pred EecCCcCccCCeEeCC--CCEEEEEECCCCEEEEEeCC-CC-EEEEe-----CCCCccceeeECCCCCEEEEECCCCEEE
Confidence 3344556778999998 76 67788888999999873 32 11111 124567899999999876542 56
Q ss_pred EEE----eeEecc---c-CCCceeEEEEcCCCeEEEE----eeC-------------CCeEEEEEccCCcccceeeeeee
Q psy13207 95 MYE----AHSINA---E-HKDLIHDVAYDYYGLRMAT----CSS-------------DQNIKVTRDVMGTRFDIETIGNF 149 (197)
Q Consensus 95 ~~~----~~~~~~---~-~~~~i~~~~~~~~~~~~~s----~~~-------------d~~i~~~d~~~~~~~~~~~~~~~ 149 (197)
.|+ +..+.. + ....++.++++++.-++++ |.. .+.|..+|..++ +... +
T Consensus 111 ~~~~~g~~~~~~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~~~~~~~~~~~~~~~~v~~~d~~~g-----~~~~-~ 184 (305)
T 3dr2_A 111 RSDADGQAHLLVGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRKPSQGCPADPELAHHSVYRLPPDGS-----PLQR-M 184 (305)
T ss_dssp EECTTSCEEEEECEETTEECSCCCCEEECTTSCEEEECCSGGGSCGGGSCCCCCSSSCEEEEEECSSSC-----CCEE-E
T ss_pred EECCCCCEEEEEeccCCCccCCCCCEEECCCCCEEEeCcCCCccccccccccccccCCCeEEEEcCCCC-----cEEE-E
Confidence 665 222210 1 1234567888833322254 332 245666666432 1111 1
Q ss_pred cCceecEEEEEEccCCCEEEEEeCC------CcEEEEEcCCC
Q psy13207 150 EDHYCTVWRVSWNITGTIVASSGDD------GCVRLWKLKKK 185 (197)
Q Consensus 150 ~~h~~~v~~~~~~p~~~~l~~~~~d------g~i~iw~~~~~ 185 (197)
. .......++|+|+++.|+.+... +.|..|++...
T Consensus 185 ~-~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~ 225 (305)
T 3dr2_A 185 A-DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDG 225 (305)
T ss_dssp E-EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETT
T ss_pred e-cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCC
Confidence 1 33456789999999977777654 68999998653
No 210
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=98.25 E-value=0.0002 Score=53.56 Aligned_cols=56 Identities=7% Similarity=0.031 Sum_probs=39.0
Q ss_pred eEEEEEccCCcccceeeeeeecCceecEEEEEEccCCC-EEEEEe-CCCcEEEEEcCCCcchhh
Q psy13207 129 NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGT-IVASSG-DDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 129 ~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~~~~-~dg~i~iw~~~~~~~~~~ 190 (197)
.|.++|..+ .+.+..+.. .....+++|+|||+ +++++. .++.|.++|..+.+....
T Consensus 299 ~V~VID~~t-----~~vv~~i~~-g~~p~~i~~s~Dg~~~l~v~~~~~~~V~ViD~~t~~vv~~ 356 (373)
T 2mad_H 299 EVTSVTGLV-----GQTSSQISL-GHDVDAISVAQDGGPDLYALSAGTEVLHIYDAGAGDQDQS 356 (373)
T ss_pred eEEEEECCC-----CEEEEEEEC-CCCcCeEEECCCCCeEEEEEcCCCCeEEEEECCCCCEEee
Confidence 455555544 344444422 22468899999999 777776 589999999999877655
No 211
>2qc5_A Streptogramin B lactonase; beta propeller, lyase; 1.80A {Staphylococcus cohnii}
Probab=98.23 E-value=0.00035 Score=49.79 Aligned_cols=147 Identities=6% Similarity=-0.107 Sum_probs=93.9
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE--
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE-- 97 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~-- 97 (197)
...+.++.+.++ |.++++...++.|..++.. ++.. .+... .....+..+++.++++.+++. +..++
T Consensus 103 ~~~~~~i~~~~~--g~l~v~~~~~~~i~~~~~~-g~~~-~~~~~---~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~ 175 (300)
T 2qc5_A 103 DSGPYGITEGLN--GDIWFTQLNGDRIGKLTAD-GTIY-EYDLP---NKGSYPAFITLGSDNALWFTENQNNSIGRITNT 175 (300)
T ss_dssp TCCEEEEEECST--TCEEEEETTTTEEEEECTT-SCEE-EEECS---STTCCEEEEEECTTSSEEEEETTTTEEEEECTT
T ss_pred CCCCccceECCC--CCEEEEccCCCeEEEECCC-CCEE-EccCC---CCCCCceeEEECCCCCEEEEecCCCeEEEECCC
Confidence 356889999998 8888887778899999876 3321 11111 123567889999998865432 55565
Q ss_pred --eeEec-ccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC
Q psy13207 98 --AHSIN-AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD 174 (197)
Q Consensus 98 --~~~~~-~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d 174 (197)
...+. ..+...+..+++.++.-++++....+.|.++|... ......+..+...+.+++++++|++.++...+
T Consensus 176 g~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~~~i~~~~~~g-----~~~~~~~~~~~~~~~~i~~d~~g~l~v~~~~~ 250 (300)
T 2qc5_A 176 GKLEEYPLPTNAAAPVGITSGNDGALWFVEIMGNKIGRITTTG-----EISEYDIPTPNARPHAITAGKNSEIWFTEWGA 250 (300)
T ss_dssp CCEEEEECSSTTCCEEEEEECTTSSEEEEETTTTEEEEECTTC-----CEEEEECSSTTCCEEEEEECSTTCEEEEETTT
T ss_pred CcEEEeeCCCCCCCcceEEECCCCCEEEEccCCCEEEEEcCCC-----cEEEEECCCCCCCceEEEECCCCCEEEeccCC
Confidence 22221 12345678888883322225555567899998731 11111223344567899999999977777667
Q ss_pred CcEEEEEcC
Q psy13207 175 GCVRLWKLK 183 (197)
Q Consensus 175 g~i~iw~~~ 183 (197)
+.|..|+..
T Consensus 251 ~~i~~~~~~ 259 (300)
T 2qc5_A 251 NQIGRITND 259 (300)
T ss_dssp TEEEEECTT
T ss_pred CeEEEECCC
Confidence 899999873
No 212
>3hrp_A Uncharacterized protein; NP_812590.1, structural genomics protein of unknown function structural genomics; HET: MSE; 1.70A {Bacteroides thetaiotaomicron vpi-5482}
Probab=98.20 E-value=0.00024 Score=53.84 Aligned_cols=148 Identities=5% Similarity=-0.047 Sum_probs=90.5
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCC---CeeeEEEccC-CCcccce-----eE
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPT---LASCLTWNHS-FSRFNSI-----SI 94 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~---~~~~~~~~~~-~~~~~~~-----~~ 94 (197)
....+.+++++|++ +.+++ +..++.|+.||..+.... .+.... ..... +...++|+|+ +..+++. ++
T Consensus 217 ~~~~p~~iav~p~~-g~lyv-~d~~~~I~~~d~~~~~~~-~~~~~~-~~g~~~~~P~~~ia~~p~~g~lyv~d~~~~~I~ 292 (409)
T 3hrp_A 217 FSGKIGAVALDETE-EWLYF-VDSNKNFGRFNVKTQEVT-LIKQLE-LSGSLGTNPGPYLIYYFVDSNFYMSDQNLSSVY 292 (409)
T ss_dssp SCSCCCBCEECTTS-SEEEE-ECTTCEEEEEETTTCCEE-EEEECC-CCSCCCCSSCCEEEEETTTTEEEEEETTTTEEE
T ss_pred hcCCcEEEEEeCCC-CeEEE-EECCCcEEEEECCCCCEE-EEeccc-ccCCCCCCccccEEEeCCCCEEEEEeCCCCEEE
Confidence 44567899999941 65555 667889999998765421 110000 11111 1238999996 4444332 56
Q ss_pred EEE----eeEecccC---------------CCceeEEEEcCCCeEEEEee-CCCeEEEEEccCCcccceeeeeeecCc--
Q psy13207 95 MYE----AHSINAEH---------------KDLIHDVAYDYYGLRMATCS-SDQNIKVTRDVMGTRFDIETIGNFEDH-- 152 (197)
Q Consensus 95 ~~~----~~~~~~~~---------------~~~i~~~~~~~~~~~~~s~~-~d~~i~~~d~~~~~~~~~~~~~~~~~h-- 152 (197)
.|+ +..+. ++ -.....++++++.-++++-. .++.|+.|+..+ +. +..+.++
T Consensus 293 ~~~~~g~~~~~~-g~~~~~g~~dg~~~~~~~~~P~gia~d~dG~lyvad~~~~~~I~~~~~~~-----G~-v~~~~g~~~ 365 (409)
T 3hrp_A 293 KITPDGECEWFC-GSATQKTVQDGLREEALFAQPNGMTVDEDGNFYIVDGFKGYCLRKLDILD-----GY-VSTVAGQVD 365 (409)
T ss_dssp EECTTCCEEEEE-ECTTCCSCBCEEGGGCBCSSEEEEEECTTCCEEEEETTTTCEEEEEETTT-----TE-EEEEEECTT
T ss_pred EEecCCCEEEEE-eCCCCCCcCCCcccccEeCCCeEEEEeCCCCEEEEeCCCCCEEEEEECCC-----CE-EEEEeCCCC
Confidence 666 22222 22 13477899983332336666 789999999654 22 2222222
Q ss_pred -------------eecEEEEEEccCCCEEEEEeCCCcEEEEEc
Q psy13207 153 -------------YCTVWRVSWNITGTIVASSGDDGCVRLWKL 182 (197)
Q Consensus 153 -------------~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~ 182 (197)
-.....++++|+|.++++-..++.|+.+++
T Consensus 366 ~~g~~~g~~~~~~~~~P~giavd~~g~lyVad~~n~~Ir~i~~ 408 (409)
T 3hrp_A 366 VASQIDGTPLEATFNYPYDICYDGEGGYWIAEAWGKAIRKYAV 408 (409)
T ss_dssp CBSCCCBSTTTCCBSSEEEEEECSSSEEEEEESTTCEEEEEEE
T ss_pred CCCcCCCChhceEeCCceEEEEcCCCCEEEEECCCCeEEEEEe
Confidence 245789999999988888888889988765
No 213
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=98.20 E-value=0.00026 Score=50.08 Aligned_cols=161 Identities=9% Similarity=0.033 Sum_probs=96.0
Q ss_pred ceeeeeeeecCCCc--ceeEEEECCCCCCcEEEEEeCCC--cEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCc
Q psy13207 13 NQWTRRSNLVDSRT--SVTDVKFGPKQLGLVLATCAADG--LVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSR 88 (197)
Q Consensus 13 ~~w~~~~~~~~h~~--~v~~~~~~~~~~~~~l~s~~~dg--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (197)
..+++..++ .|.. -...+.|+ + +.++.+.+.+| .|+.+|+.+++.+.+..+.. ......++...+.-+
T Consensus 29 ~~~~vv~~~-phd~~~ftqGL~~~-~--~~LyestG~~g~S~v~~vD~~Tgkv~~~~~l~~----~~FgeGit~~g~~ly 100 (262)
T 3nol_A 29 YDYQIVHSY-PHDTKAFTEGFFYR-N--GYFYESTGLNGRSSIRKVDIESGKTLQQIELGK----RYFGEGISDWKDKIV 100 (262)
T ss_dssp EEEEEEEEE-ECCTTCEEEEEEEE-T--TEEEEEEEETTEEEEEEECTTTCCEEEEEECCT----TCCEEEEEEETTEEE
T ss_pred cceEEEEEe-cCCCCcccceEEEE-C--CEEEEECCCCCCceEEEEECCCCcEEEEEecCC----ccceeEEEEeCCEEE
Confidence 345555566 3443 35889998 6 88888888876 99999999988765544321 111223343322111
Q ss_pred ccc----eeEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC----ce-
Q psy13207 89 FNS----ISIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED----HY- 153 (197)
Q Consensus 89 ~~~----~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~----h~- 153 (197)
.++ .+.+|| +..+. . ...-..+++.+..+ +.+..++.|.++|..+ .+.+..+.- ..
T Consensus 101 ~ltw~~~~v~v~D~~t~~~~~ti~-~-~~eG~glt~dg~~L--~~SdGs~~i~~iDp~T-----~~v~~~I~V~~~g~~~ 171 (262)
T 3nol_A 101 GLTWKNGLGFVWNIRNLRQVRSFN-Y-DGEGWGLTHNDQYL--IMSDGTPVLRFLDPES-----LTPVRTITVTAHGEEL 171 (262)
T ss_dssp EEESSSSEEEEEETTTCCEEEEEE-C-SSCCCCEEECSSCE--EECCSSSEEEEECTTT-----CSEEEEEECEETTEEC
T ss_pred EEEeeCCEEEEEECccCcEEEEEE-C-CCCceEEecCCCEE--EEECCCCeEEEEcCCC-----CeEEEEEEeccCCccc
Confidence 111 267777 44444 2 22234666666655 5555678899999876 333333221 22
Q ss_pred ecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 154 CTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 154 ~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
..++.+.|. +|++.+..-.++.|.+.|.++++....+
T Consensus 172 ~~lNELe~~-~G~lyan~w~~~~I~vIDp~tG~V~~~I 208 (262)
T 3nol_A 172 PELNELEWV-DGEIFANVWQTNKIVRIDPETGKVTGII 208 (262)
T ss_dssp CCEEEEEEE-TTEEEEEETTSSEEEEECTTTCBEEEEE
T ss_pred cccceeEEE-CCEEEEEEccCCeEEEEECCCCcEEEEE
Confidence 335667776 7776655557889999999987754433
No 214
>2oiz_A Aromatic amine dehydrogenase, large subunit; oxidoreductase, tryptophan tryptophyl quinone, H-tunneling; HET: TRQ TSR PG4; 1.05A {Alcaligenes faecalis} PDB: 2agw_A* 2agx_A* 2agl_A* 2agz_A* 2ah0_A* 2ah1_A* 2hj4_A* 2hjb_A* 2i0t_A* 2iup_A* 2iuq_A* 2iur_A* 2iuv_A* 2agy_A* 2ok4_A* 2ok6_A* 2iaa_A* 2h47_A* 2h3x_A* 2hkr_A* ...
Probab=98.20 E-value=2.4e-05 Score=58.21 Aligned_cols=89 Identities=10% Similarity=0.038 Sum_probs=59.9
Q ss_pred EEECCCCCCcEEEEEeC-----------CCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEee
Q psy13207 31 VKFGPKQLGLVLATCAA-----------DGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAH 99 (197)
Q Consensus 31 ~~~~~~~~~~~l~s~~~-----------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 99 (197)
+.|+|+ +..++.+.. +++|.+||+.+.+.+..+
T Consensus 259 ~a~~~d--g~~lyv~~~~~~~~~~~~~~~~~v~viD~~t~~~v~~i---------------------------------- 302 (361)
T 2oiz_A 259 VGLHRA--SGRMYVFMHPDGKEGTHKFPAAEIWVMDTKTKQRVARI---------------------------------- 302 (361)
T ss_dssp EEEETT--TTEEEEEEESSCCTTCTTCCCSEEEEEETTTTEEEEEE----------------------------------
T ss_pred EEEecC--CCeEEEEEccCCCcccccCCCceEEEEECCCCcEEEEE----------------------------------
Confidence 678887 666655432 348999998876543222
Q ss_pred EecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccce--eeeeeecCceecEEEEEEccCCC
Q psy13207 100 SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDI--ETIGNFEDHYCTVWRVSWNITGT 166 (197)
Q Consensus 100 ~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~--~~~~~~~~h~~~v~~~~~~p~~~ 166 (197)
. .+. ..+++|+++.-+|++++. +.|.+||..+ . +.+..+..+......++++|+|+
T Consensus 303 --~-~~~--p~~ia~spdg~~l~v~n~-~~v~v~D~~t-----~~l~~~~~i~~~G~~P~~~~~~p~G~ 360 (361)
T 2oiz_A 303 --P-GRD--ALSMTIDQQRNLMLTLDG-GNVNVYDISQ-----PEPKLLRTIEGAAEASLQVQFHPVGG 360 (361)
T ss_dssp --E-CTT--CCEEEEETTTTEEEEECS-SCEEEEECSS-----SSCEEEEEETTSCSSEEEEEECCCSC
T ss_pred --e-cCC--eeEEEECCCCCEEEEeCC-CeEEEEECCC-----CcceeeEEeccCCCCcEEEEecCCCC
Confidence 2 233 666777632222266665 9999999987 6 77777666666778899999985
No 215
>3dr2_A Exported gluconolactonase; gluconolactonase SMP-30, six-bladed-propeller dimer, vitamin C, hydrolase; 1.67A {Xanthomonas campestris PV}
Probab=98.14 E-value=0.00013 Score=52.74 Aligned_cols=150 Identities=8% Similarity=-0.053 Sum_probs=85.6
Q ss_pred cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc--CCCeeeEEEccCCCcccc--------
Q psy13207 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC--PTLASCLTWNHSFSRFNS-------- 91 (197)
Q Consensus 22 ~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~-------- 91 (197)
..+...+.++.++++ |+++++...++.|..|+.. ++. ..+ ...... ...+..++++++|+.+++
T Consensus 82 ~~~~~~~~gl~~d~d--G~l~v~~~~~~~v~~~~~~-g~~-~~~--~~~~~~~~~~~~~~i~~d~dG~l~~td~~~g~~~ 155 (305)
T 3dr2_A 82 LDATAFTNGNAVDAQ--QRLVHCEHGRRAITRSDAD-GQA-HLL--VGRYAGKRLNSPNDLIVARDGAIWFTDPPFGLRK 155 (305)
T ss_dssp EESCSCEEEEEECTT--SCEEEEETTTTEEEEECTT-SCE-EEE--ECEETTEECSCCCCEEECTTSCEEEECCSGGGSC
T ss_pred eCCCCccceeeECCC--CCEEEEECCCCEEEEECCC-CCE-EEE--EeccCCCccCCCCCEEECCCCCEEEeCcCCCccc
Confidence 344567889999998 8877666666889999975 321 111 111111 345678999999987662
Q ss_pred --------------eeEEEEe-----eEecccCCCceeEEEEcCCCeEEEEeeCC------CeEEEEEccCCcccceeee
Q psy13207 92 --------------ISIMYEA-----HSINAEHKDLIHDVAYDYYGLRMATCSSD------QNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 92 --------------~~~~~~~-----~~~~~~~~~~i~~~~~~~~~~~~~s~~~d------~~i~~~d~~~~~~~~~~~~ 146 (197)
.+..|+. ..+. .....+.++|+++.-.|+.+... +.|.+|++...........
T Consensus 156 ~~~~~~~~~~~~~~~v~~~d~~~g~~~~~~--~~~~p~gl~~spdg~~lyv~~~~~~~~~~~~i~~~~~~~~~l~~~~~~ 233 (305)
T 3dr2_A 156 PSQGCPADPELAHHSVYRLPPDGSPLQRMA--DLDHPNGLAFSPDEQTLYVSQTPEQGHGSVEITAFAWRDGALHDRRHF 233 (305)
T ss_dssp GGGSCCCCCSSSCEEEEEECSSSCCCEEEE--EESSEEEEEECTTSSEEEEEECCC---CCCEEEEEEEETTEEEEEEEE
T ss_pred cccccccccccCCCeEEEEcCCCCcEEEEe--cCCCCcceEEcCCCCEEEEEecCCcCCCCCEEEEEEecCCCccCCeEE
Confidence 2344441 1111 12345778998443222444443 7899999864210001111
Q ss_pred eeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 147 GNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 147 ~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
... .......++++++|++.++ +.+ .|.+|+..
T Consensus 234 ~~~--~~~~pdgi~~d~~G~lwv~-~~~-gv~~~~~~ 266 (305)
T 3dr2_A 234 ASV--PDGLPDGFCVDRGGWLWSS-SGT-GVCVFDSD 266 (305)
T ss_dssp ECC--SSSCCCSEEECTTSCEEEC-CSS-EEEEECTT
T ss_pred EEC--CCCCCCeEEECCCCCEEEe-cCC-cEEEECCC
Confidence 111 1233456889999985544 444 48888874
No 216
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=98.13 E-value=0.00087 Score=47.66 Aligned_cols=159 Identities=9% Similarity=0.008 Sum_probs=96.8
Q ss_pred eeeeeeecCCCc--ceeEEEECCCCCCcEEEEEeC--CCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCccc
Q psy13207 15 WTRRSNLVDSRT--SVTDVKFGPKQLGLVLATCAA--DGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFN 90 (197)
Q Consensus 15 w~~~~~~~~h~~--~v~~~~~~~~~~~~~l~s~~~--dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (197)
+++..++. |.. ....+.|+|+ +.++++.+. ++.|...|+.+++.+....+.. ......+++. ++.+.
T Consensus 9 ~~vv~~~p-~~~~~f~~Gl~~~~d--g~Lyvstg~~~~s~v~~iD~~tg~v~~~i~l~~----~~fgeGi~~~--g~~ly 79 (266)
T 2iwa_A 9 VEVLNEFP-HDPYAFTQGLVYAEN--DTLFESTGLYGRSSVRQVALQTGKVENIHKMDD----SYFGEGLTLL--NEKLY 79 (266)
T ss_dssp EEEEEEEE-CCTTCCEEEEEECST--TEEEEEECSTTTCEEEEEETTTCCEEEEEECCT----TCCEEEEEEE--TTEEE
T ss_pred ceEEEEEE-CCCCCCcccEEEeCC--CeEEEECCCCCCCEEEEEECCCCCEEEEEecCC----CcceEEEEEe--CCEEE
Confidence 44455553 443 3689999998 877776654 6899999999987665444221 1222344444 33332
Q ss_pred c------eeEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC--ce---
Q psy13207 91 S------ISIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED--HY--- 153 (197)
Q Consensus 91 ~------~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~--h~--- 153 (197)
. .+.++| +..+..+ ...-..++..+..+ +.+..++.|.++|..+ .+.+..+.- +.
T Consensus 80 v~t~~~~~v~viD~~t~~v~~~i~~g-~~~g~glt~Dg~~l--~vs~gs~~l~viD~~t-----~~v~~~I~Vg~~~~p~ 151 (266)
T 2iwa_A 80 QVVWLKNIGFIYDRRTLSNIKNFTHQ-MKDGWGLATDGKIL--YGSDGTSILYEIDPHT-----FKLIKKHNVKYNGHRV 151 (266)
T ss_dssp EEETTCSEEEEEETTTTEEEEEEECC-SSSCCEEEECSSSE--EEECSSSEEEEECTTT-----CCEEEEEECEETTEEC
T ss_pred EEEecCCEEEEEECCCCcEEEEEECC-CCCeEEEEECCCEE--EEECCCCeEEEEECCC-----CcEEEEEEECCCCccc
Confidence 1 267777 4444412 12234566666666 5555688999999877 333333321 11
Q ss_pred ecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 154 CTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 154 ~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
..++.+.|. +|...+....++.|.+.|..+++....+
T Consensus 152 ~~~nele~~-dg~lyvn~~~~~~V~vID~~tg~V~~~I 188 (266)
T 2iwa_A 152 IRLNELEYI-NGEVWANIWQTDCIARISAKDGTLLGWI 188 (266)
T ss_dssp CCEEEEEEE-TTEEEEEETTSSEEEEEETTTCCEEEEE
T ss_pred ccceeEEEE-CCEEEEecCCCCeEEEEECCCCcEEEEE
Confidence 136788888 7765555556889999999988754443
No 217
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=98.13 E-value=0.00019 Score=52.86 Aligned_cols=121 Identities=10% Similarity=0.005 Sum_probs=71.0
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeC-----CCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEE
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAA-----DGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYE 97 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~-----dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 97 (197)
+|...+.+++++++ ++++++-.. ++.|.+||+.+++.+..+.+.....
T Consensus 64 ~~~~~p~gv~~d~~--g~L~v~D~g~~~~~~~~i~~~d~~tg~~~~~~~~~~~~~------------------------- 116 (343)
T 2qe8_A 64 ITFDTVLGIKSDGN--GIVWMLDNGNQSKSVPKLVAWDTLNNQLSRVIYLPPPIT------------------------- 116 (343)
T ss_dssp CCCSCEEEEEECSS--SEEEEEECHHHHTSCCEEEEEETTTTEEEEEEECCTTTS-------------------------
T ss_pred cceeEeeEEEEcCC--CcEEEEcCCCCcCCCCeEEEEECCCCeEEEEEECChhhc-------------------------
Confidence 35568999999998 877665543 5789999998776443332211000
Q ss_pred eeEecccCCCceeEEEEcC-CCeEEEEee---CCCeEEEEEccCCcccceeeeeeecCc---------------------
Q psy13207 98 AHSINAEHKDLIHDVAYDY-YGLRMATCS---SDQNIKVTRDVMGTRFDIETIGNFEDH--------------------- 152 (197)
Q Consensus 98 ~~~~~~~~~~~i~~~~~~~-~~~~~~s~~---~d~~i~~~d~~~~~~~~~~~~~~~~~h--------------------- 152 (197)
.+...+..+++++ ....+++-. .++.|.+||..+.. ....+.+|
T Consensus 117 ------~~~~~~~~v~vd~~~g~~yvtd~~~~~~~~i~v~d~~~g~-----~~r~~~~~~~~~~~~~~~~~~g~~~~~~~ 185 (343)
T 2qe8_A 117 ------LSNSFVNDLAVDLIHNFVYISDPAPDDKAALIRVDLQTGL-----AARVLQGYPGIAPEDIDLVIDGVPVQIGQ 185 (343)
T ss_dssp ------CTTCCCCEEEEETTTTEEEEEECCSGGGCEEEEEETTTCC-----EEEECTTCTTTSCCSCCCEETTEECBEEC
T ss_pred ------ccccccceEEEecCCCEEEEEcCccCCCCeEEEEECCCCC-----EEEEecCCCcccccccceeECCEEEEecc
Confidence 1223445666662 223224444 56788888876421 11111110
Q ss_pred --------eecEEEEEEccCCCEEEEEeCCC-cEEEEE
Q psy13207 153 --------YCTVWRVSWNITGTIVASSGDDG-CVRLWK 181 (197)
Q Consensus 153 --------~~~v~~~~~~p~~~~l~~~~~dg-~i~iw~ 181 (197)
...+..++|+|+|+.|+.+..++ .+..++
T Consensus 186 ~~g~~~~~~~~~~gia~s~dg~~ly~~~~~~~~l~~~~ 223 (343)
T 2qe8_A 186 PDGTVIRPHLGVNGIVLDAENEWLYLSPMHSTSMYRIK 223 (343)
T ss_dssp TTSCEECCCCCEEEEEECTTSCEEEEEESSCSEEEEEE
T ss_pred CCCceeceecccceeEeccCCCEEEEEeCCCCeEEEEE
Confidence 12368899999999888887666 444444
No 218
>3iuj_A Prolyl endopeptidase; hydrolase; 1.80A {Aeromonas punctata} PDB: 3iul_A 3ium_A 3ivm_A* 3iur_A* 3iun_A* 3iuq_A* 3muo_A* 3mun_A*
Probab=98.12 E-value=0.00012 Score=59.15 Aligned_cols=164 Identities=7% Similarity=-0.089 Sum_probs=92.3
Q ss_pred cccceeeeee--eecCCCcce--eEEEECCCCCCcEEEEEeCCCc-------------EEEEEcCCcccccceeccceec
Q psy13207 10 KCLNQWTRRS--NLVDSRTSV--TDVKFGPKQLGLVLATCAADGL-------------VRIYEAPDVMNLSQWCLQHEVA 72 (197)
Q Consensus 10 ~~~~~w~~~~--~~~~h~~~v--~~~~~~~~~~~~~l~s~~~dg~-------------v~iw~~~~~~~~~~~~~~~~~~ 72 (197)
.++++|++.. .+..+...+ ..+.|+ + ++.|+.++.+.. |++|++.+........ .....
T Consensus 155 ~~i~v~dl~tg~~~~~~~~~~k~~~~~Ws-D--g~~l~y~~~~~~~~~~~~~~~~~~~v~~~~lgt~~~~~~~v-~~~~~ 230 (693)
T 3iuj_A 155 REIHLMDVESKQPLETPLKDVKFSGISWL-G--NEGFFYSSYDKPDGSELSARTDQHKVYFHRLGTAQEDDRLV-FGAIP 230 (693)
T ss_dssp EEEEEEETTTCSEEEEEEEEEESCCCEEE-T--TTEEEEEESSCCC-------CCCCEEEEEETTSCGGGCEEE-ESCSG
T ss_pred EEEEEEECCCCCCCccccCCceeccEEEe-C--CCEEEEEEecCcccccccccCCCcEEEEEECCCCcccceEE-EecCC
Confidence 4566666532 122222233 578899 8 888888877743 9999987754311110 01000
Q ss_pred -cCCCeeeEEEccCCCcccce---------eEEEE-------eeEecccCCCceeEEEEc-CCCeEEEEeeCC---CeEE
Q psy13207 73 -CPTLASCLTWNHSFSRFNSI---------SIMYE-------AHSINAEHKDLIHDVAYD-YYGLRMATCSSD---QNIK 131 (197)
Q Consensus 73 -~~~~~~~~~~~~~~~~~~~~---------~~~~~-------~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d---~~i~ 131 (197)
.......+.|+|++++++.. +.+++ ...+. .+.........+ ++.+++. ...+ +.|.
T Consensus 231 ~~~~~~~~~~~SpDg~~l~~~~~~~~~~~~i~~~d~~~~~~~~~~l~-~~~~~~~~~~~~~g~~l~~~-t~~~~~~~~l~ 308 (693)
T 3iuj_A 231 AQHHRYVGATVTEDDRFLLISAANSTSGNRLYVKDLSQENAPLLTVQ-GDLDADVSLVDNKGSTLYLL-TNRDAPNRRLV 308 (693)
T ss_dssp GGCCSEEEEEECTTSCEEEEEEESSSSCCEEEEEETTSTTCCCEEEE-CSSSSCEEEEEEETTEEEEE-ECTTCTTCEEE
T ss_pred CCCeEEEEEEEcCCCCEEEEEEccCCCCcEEEEEECCCCCCceEEEe-CCCCceEEEEeccCCEEEEE-ECCCCCCCEEE
Confidence 12346788999999987432 45555 23333 344444443223 5555333 3333 6788
Q ss_pred EEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC-C--cEEEEEcCC
Q psy13207 132 VTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD-G--CVRLWKLKK 184 (197)
Q Consensus 132 ~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d-g--~i~iw~~~~ 184 (197)
.+|+.+..... ...+..|...+. .|+|++++|+....+ + .|.+|++..
T Consensus 309 ~~d~~~~~~~~---~~~l~~~~~~~~--~~s~~g~~lv~~~~~~g~~~l~~~d~~g 359 (693)
T 3iuj_A 309 TVDAANPGPAH---WRDLIPERQQVL--TVHSGSGYLFAEYMVDATARVEQFDYEG 359 (693)
T ss_dssp EEETTSCCGGG---CEEEECCCSSCE--EEEEETTEEEEEEEETTEEEEEEECTTS
T ss_pred EEeCCCCCccc---cEEEecCCCCEE--EEEEECCEEEEEEEECCeeEEEEEECCC
Confidence 88887532111 123344544444 899999888776654 4 688888764
No 219
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=98.05 E-value=0.00021 Score=53.35 Aligned_cols=58 Identities=9% Similarity=0.057 Sum_probs=40.9
Q ss_pred eEEEEEccCCcccceeeeeeecCceecEEEEEEccCCC-EEEEEe-CCCcEEEEEcCCCcchhhhh
Q psy13207 129 NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGT-IVASSG-DDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 129 ~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~-~l~~~~-~dg~i~iw~~~~~~~~~~~~ 192 (197)
.+.++|..+ .+.+..+... .....++|+|||+ ++++.. .+++|.++|+.+.+....++
T Consensus 295 ~~~ViD~~t-----~~vv~~i~vg-~~p~gi~~s~Dg~~l~va~~~~~~~VsVID~~t~kvv~~I~ 354 (368)
T 1mda_H 295 NTSSVTASV-----GQTSGPISNG-HDSDAIIAAQDGASDNYANSAGTEVLDIYDAASDQDQSSVE 354 (368)
T ss_dssp EEEEEESSS-----CCEEECCEEE-EEECEEEECCSSSCEEEEEETTTTEEEEEESSSCEEEEECC
T ss_pred CEEEEECCC-----CeEEEEEECC-CCcceEEECCCCCEEEEEccCCCCeEEEEECCCCcEEEEEE
Confidence 445788766 4444444332 2578899999997 556666 59999999999987766554
No 220
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=98.04 E-value=0.00017 Score=54.88 Aligned_cols=37 Identities=0% Similarity=0.060 Sum_probs=31.3
Q ss_pred cEEEEEEccCCC-EEEEEe-CCCcEEEEEcCCCcchhhh
Q psy13207 155 TVWRVSWNITGT-IVASSG-DDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 155 ~v~~~~~~p~~~-~l~~~~-~dg~i~iw~~~~~~~~~~~ 191 (197)
..+.+.|+|||+ ++++.. .++.|.++|+.+.+....+
T Consensus 371 ~P~gia~spDg~~~lyv~n~~s~~VsVID~~t~kvv~tI 409 (426)
T 3c75_H 371 EIDSINVSQDAEPLLYALSAGTQTLHIYDAATGEELRSV 409 (426)
T ss_dssp EECEEEECCSSSCEEEEEETTTTEEEEEETTTCCEEEEE
T ss_pred CcCeEEEccCCCEEEEEEcCCCCeEEEEECCCCCEEEEe
Confidence 467899999999 888887 5899999999998876654
No 221
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=97.94 E-value=0.00077 Score=47.74 Aligned_cols=146 Identities=9% Similarity=-0.030 Sum_probs=90.7
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc----eeEEEE-----
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS----ISIMYE----- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~----- 97 (197)
-...+.|+. +.++++.+.+|.|+.+|+.+++.+.+. +.. ......+++..+.-+.++ .+.+||
T Consensus 56 ftqGL~~~~---~~Ly~stG~~g~v~~iD~~Tgkv~~~~-l~~----~~FgeGit~~g~~Ly~ltw~~~~v~V~D~~Tl~ 127 (268)
T 3nok_A 56 FTQGLVFHQ---GHFFESTGHQGTLRQLSLESAQPVWME-RLG----NIFAEGLASDGERLYQLTWTEGLLFTWSGMPPQ 127 (268)
T ss_dssp CEEEEEEET---TEEEEEETTTTEEEECCSSCSSCSEEE-ECT----TCCEEEEEECSSCEEEEESSSCEEEEEETTTTE
T ss_pred ccceEEEEC---CEEEEEcCCCCEEEEEECCCCcEEeEE-CCC----CcceeEEEEeCCEEEEEEccCCEEEEEECCcCc
Confidence 357888873 778889999999999999999876554 221 112233444333222221 267777
Q ss_pred -eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC--ce---ecEEEEEEccCCCEEEEE
Q psy13207 98 -AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED--HY---CTVWRVSWNITGTIVASS 171 (197)
Q Consensus 98 -~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~--h~---~~v~~~~~~p~~~~l~~~ 171 (197)
+..+. . ...-..+++.+..+ +.+..++.|.++|..+ .+.+..+.- +. ..++.+.|. +|++.+..
T Consensus 128 ~~~ti~-~-~~eGwGLt~Dg~~L--~vSdGs~~l~~iDp~T-----~~v~~~I~V~~~g~~v~~lNeLe~~-dG~lyanv 197 (268)
T 3nok_A 128 RERTTR-Y-SGEGWGLCYWNGKL--VRSDGGTMLTFHEPDG-----FALVGAVQVKLRGQPVELINELECA-NGVIYANI 197 (268)
T ss_dssp EEEEEE-C-SSCCCCEEEETTEE--EEECSSSEEEEECTTT-----CCEEEEEECEETTEECCCEEEEEEE-TTEEEEEE
T ss_pred EEEEEe-C-CCceeEEecCCCEE--EEECCCCEEEEEcCCC-----CeEEEEEEeCCCCcccccccccEEe-CCEEEEEE
Confidence 44444 2 22335666666655 5555688999999877 333333322 11 245677877 77666555
Q ss_pred eCCCcEEEEEcCCCcchhh
Q psy13207 172 GDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 172 ~~dg~i~iw~~~~~~~~~~ 190 (197)
-.+..|.+.|.++++....
T Consensus 198 w~s~~I~vIDp~TG~V~~~ 216 (268)
T 3nok_A 198 WHSSDVLEIDPATGTVVGV 216 (268)
T ss_dssp TTCSEEEEECTTTCBEEEE
T ss_pred CCCCeEEEEeCCCCcEEEE
Confidence 5688999999998875443
No 222
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=97.84 E-value=0.0031 Score=44.14 Aligned_cols=157 Identities=10% Similarity=0.043 Sum_probs=94.1
Q ss_pred eeeeeeeecCCC--cceeEEEECCCCCCcEEEEEeCCC--cEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcc
Q psy13207 14 QWTRRSNLVDSR--TSVTDVKFGPKQLGLVLATCAADG--LVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRF 89 (197)
Q Consensus 14 ~w~~~~~~~~h~--~~v~~~~~~~~~~~~~l~s~~~dg--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (197)
.+++..++ .|. .-...+.|++ +.++.+.+.+| .|+.+|+.+++.+.+..+.. ...-..++.. ++.+
T Consensus 8 ~~~v~~~~-phd~~~ftqGL~~~~---~~LyestG~~g~S~v~~vD~~tgkv~~~~~l~~----~~fgeGi~~~--~~~l 77 (243)
T 3mbr_X 8 GYRVVKRY-PHDTTAFTEGLFYLR---GHLYESTGETGRSSVRKVDLETGRILQRAEVPP----PYFGAGIVAW--RDRL 77 (243)
T ss_dssp CEEEEEEE-ECCTTCCEEEEEEET---TEEEEEECCTTSCEEEEEETTTCCEEEEEECCT----TCCEEEEEEE--TTEE
T ss_pred ceEEEEEc-CCCCccccccEEEEC---CEEEEECCCCCCceEEEEECCCCCEEEEEeCCC----CcceeEEEEe--CCEE
Confidence 34555555 454 3467899976 66777777754 99999999988765544322 1111233333 2322
Q ss_pred c------ceeEEEE------eeEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC--ce--
Q psy13207 90 N------SISIMYE------AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED--HY-- 153 (197)
Q Consensus 90 ~------~~~~~~~------~~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~--h~-- 153 (197)
. ..+.+|| +..++ . ...-..+++.+..+ +.+..++.|.++|..+ .+.+..+.- +.
T Consensus 78 y~ltw~~~~v~v~D~~tl~~~~ti~-~-~~~Gwglt~dg~~L--~vSdgs~~l~~iDp~t-----~~~~~~I~V~~~g~~ 148 (243)
T 3mbr_X 78 IQLTWRNHEGFVYDLATLTPRARFR-Y-PGEGWALTSDDSHL--YMSDGTAVIRKLDPDT-----LQQVGSIKVTAGGRP 148 (243)
T ss_dssp EEEESSSSEEEEEETTTTEEEEEEE-C-SSCCCEEEECSSCE--EEECSSSEEEEECTTT-----CCEEEEEECEETTEE
T ss_pred EEEEeeCCEEEEEECCcCcEEEEEe-C-CCCceEEeeCCCEE--EEECCCCeEEEEeCCC-----CeEEEEEEEccCCcc
Confidence 1 1267777 44444 2 22335677766555 5555688999999877 333333322 11
Q ss_pred -ecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 154 -CTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 154 -~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
..++.+.|. +|+..+..-.+..|.+.|.++++....
T Consensus 149 ~~~lNeLe~~-~G~lyanvw~s~~I~vIDp~tG~V~~~ 185 (243)
T 3mbr_X 149 LDNLNELEWV-NGELLANVWLTSRIARIDPASGKVVAW 185 (243)
T ss_dssp CCCEEEEEEE-TTEEEEEETTTTEEEEECTTTCBEEEE
T ss_pred cccceeeEEe-CCEEEEEECCCCeEEEEECCCCCEEEE
Confidence 245667766 676665555678999999998775443
No 223
>2qe8_A Uncharacterized protein; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2; HET: MSE UNL PG4; 1.35A {Anabaena variabilis atcc 29413}
Probab=97.84 E-value=0.00074 Score=49.73 Aligned_cols=145 Identities=8% Similarity=-0.057 Sum_probs=86.4
Q ss_pred cceeEEEECCCCCCcEEEEEe---CCCcEEEEEcCCcccccceec-------------c-ceec----------cCCCee
Q psy13207 26 TSVTDVKFGPKQLGLVLATCA---ADGLVRIYEAPDVMNLSQWCL-------------Q-HEVA----------CPTLAS 78 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~---~dg~v~iw~~~~~~~~~~~~~-------------~-~~~~----------~~~~~~ 78 (197)
..+..++++|++ +..+++-. .++.|.+||+.+++....... . ..+. -...+.
T Consensus 120 ~~~~~v~vd~~~-g~~yvtd~~~~~~~~i~v~d~~~g~~~r~~~~~~~~~~~~~~~~~~g~~~~~~~~~g~~~~~~~~~~ 198 (343)
T 2qe8_A 120 SFVNDLAVDLIH-NFVYISDPAPDDKAALIRVDLQTGLAARVLQGYPGIAPEDIDLVIDGVPVQIGQPDGTVIRPHLGVN 198 (343)
T ss_dssp CCCCEEEEETTT-TEEEEEECCSGGGCEEEEEETTTCCEEEECTTCTTTSCCSCCCEETTEECBEECTTSCEECCCCCEE
T ss_pred cccceEEEecCC-CEEEEEcCccCCCCeEEEEECCCCCEEEEecCCCcccccccceeECCEEEEeccCCCceeceecccc
Confidence 456889999852 55566665 688999999986643221110 0 0000 012457
Q ss_pred eEEEccCCCcccce----eEEEEeeE------------------ecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEcc
Q psy13207 79 CLTWNHSFSRFNSI----SIMYEAHS------------------INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDV 136 (197)
Q Consensus 79 ~~~~~~~~~~~~~~----~~~~~~~~------------------~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~ 136 (197)
.++|+|+++.+..+ -++|.+.. .. ++......++++++..++++...++.|.+||..
T Consensus 199 gia~s~dg~~ly~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~~~~-g~~g~pdgia~d~~G~l~va~~~~~~V~~~d~~ 277 (343)
T 2qe8_A 199 GIVLDAENEWLYLSPMHSTSMYRIKSADLSNLQLTDAELGSKIERY-SEKPICDGISIDKDHNIYVGDLAHSAIGVITSA 277 (343)
T ss_dssp EEEECTTSCEEEEEESSCSEEEEEEHHHHTCTTCCHHHHHTTCEEE-EECCSCSCEEECTTCCEEEEEGGGTEEEEEETT
T ss_pred eeEeccCCCEEEEEeCCCCeEEEEEHHHhcCCCCChhhhhcceEec-ccCCCCceEEECCCCCEEEEccCCCeEEEEECC
Confidence 89999999876433 25555210 11 223345678888333333777888999999983
Q ss_pred CCcccceeeeeeec-CceecEEEEEEccCCCEEEEEeCCCcE
Q psy13207 137 MGTRFDIETIGNFE-DHYCTVWRVSWNITGTIVASSGDDGCV 177 (197)
Q Consensus 137 ~~~~~~~~~~~~~~-~h~~~v~~~~~~p~~~~l~~~~~dg~i 177 (197)
+ ++...... .+.....+++|.++++++++.+..+.+
T Consensus 278 ~-----G~~~~~~~~~~~~~p~~va~~~~g~l~v~~~~~~~~ 314 (343)
T 2qe8_A 278 D-----RAYKLLVTDEKLSWTDSFNFGSDGYLYFDCNQLHHS 314 (343)
T ss_dssp T-----TEEEEEEECGGGSCEEEEEECTTSCEEEEECCGGGS
T ss_pred C-----CCEEEEEECCceecCCeeEECCCCcEEEEeCccccc
Confidence 3 22211111 124567899999999988887754433
No 224
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=97.82 E-value=3.6e-06 Score=62.96 Aligned_cols=130 Identities=8% Similarity=-0.060 Sum_probs=62.6
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc-----eeEEEEeeE------ecccCCC
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS-----ISIMYEAHS------INAEHKD 107 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~~~~~------~~~~~~~ 107 (197)
+..+++++.||.|+.||..+++.+-.+.. ..+.+..+..++..++. .+..||... .. .+..
T Consensus 9 ~~~v~~gs~dg~v~a~d~~tG~~~W~~~~-------~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~~w~~~-~~~~ 80 (369)
T 2hz6_A 9 ETLLFVSTLDGSLHAVSKRTGSIKWTLKE-------DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEGLTKLP-FTIP 80 (369)
T ss_dssp TTEEEEEETTSEEEEEETTTCCEEEEEEC-------CCSCCCC-----CCEEECTTTCCEEEC-----CCSEECS-CCHH
T ss_pred CCEEEEEcCCCEEEEEECCCCCEEEEecC-------CCceecceEcCCCEEEEeCCCCEEEEEECCCCceeeeee-ccCc
Confidence 66889999999999999999876533322 12223333344433332 155565211 11 1100
Q ss_pred -cee-EEEE-cCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 108 -LIH-DVAY-DYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 108 -~i~-~~~~-~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
.+. .... ....+ ++++.|+.++.||.++ ++.+-.+..+. ...++|++..+++++.|+.|+.||.++
T Consensus 81 ~~~~~sp~~~~~~~v--~~g~~dg~v~a~D~~t-----G~~~w~~~~~~----~~~~~p~~~~v~~~~~dg~v~a~d~~t 149 (369)
T 2hz6_A 81 ELVQASPCRSSDGIL--YMGKKQDIWYVIDLLT-----GEKQQTLSSAF----ADSLSPSTSLLYLGRTEYTITMYDTKT 149 (369)
T ss_dssp HHHTTCSCC-----C--CCCEEEEEEEEECCC-------------------------------EEEEEEEEEEECCCSSS
T ss_pred cccccCceEecCCEE--EEEeCCCEEEEEECCC-----CcEEEEecCCC----cccccccCCEEEEEecCCEEEEEECCC
Confidence 010 1111 23445 7788899999999987 44444443332 234567888899999999999999988
Q ss_pred Ccc
Q psy13207 185 KRK 187 (197)
Q Consensus 185 ~~~ 187 (197)
++.
T Consensus 150 G~~ 152 (369)
T 2hz6_A 150 REL 152 (369)
T ss_dssp SSC
T ss_pred CCE
Confidence 764
No 225
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.82 E-value=0.0024 Score=47.94 Aligned_cols=137 Identities=5% Similarity=-0.153 Sum_probs=82.0
Q ss_pred EEECCCCCCcEEEEEeC-----CCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-------------
Q psy13207 31 VKFGPKQLGLVLATCAA-----DGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------------- 92 (197)
Q Consensus 31 ~~~~~~~~~~~l~s~~~-----dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------- 92 (197)
....|+ ++.+..... ++.|.+.|..+.+.+.++.. +..+ . +.++|+++++..+
T Consensus 38 ~~~~pd--~~~vyV~~~~~~~~~~~V~ViD~~t~~v~~~I~v-----G~~P-~-va~spDG~~lyVan~~~~r~~~G~~~ 108 (386)
T 3sjl_D 38 EAPAPD--ARRVYVNDPAHFAAVTQQFVIDGEAGRVIGMIDG-----GFLP-N-PVVADDGSFIAHASTVFSRIARGERT 108 (386)
T ss_dssp CCCCCC--TTEEEEEECGGGCSSEEEEEEETTTTEEEEEEEE-----CSSC-E-EEECTTSSCEEEEEEEEEETTEEEEE
T ss_pred eccCCC--CCEEEEEcCcccCCCCEEEEEECCCCeEEEEEEC-----CCCC-c-EEECCCCCEEEEEcccccccccCCCC
Confidence 345677 777666654 68999999988765544332 1233 4 9999999986433
Q ss_pred --eEEEE------eeEecccC------CCceeEEEEcCCCeEEEEeeC--CCeEEEEEccCCcccceeeeeeecCceecE
Q psy13207 93 --SIMYE------AHSINAEH------KDLIHDVAYDYYGLRMATCSS--DQNIKVTRDVMGTRFDIETIGNFEDHYCTV 156 (197)
Q Consensus 93 --~~~~~------~~~~~~~~------~~~i~~~~~~~~~~~~~s~~~--d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v 156 (197)
+.+|| +..+..+. ......++++++.-++..++. ++.|.++|..+ .+.+..+.... .
T Consensus 109 ~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~~~VsVID~~t-----~~vv~tI~v~g--~ 181 (386)
T 3sjl_D 109 DYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPAPAVGVVDLEG-----KAFKRMLDVPD--C 181 (386)
T ss_dssp EEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSSCEEEEEETTT-----TEEEEEEECCS--E
T ss_pred CEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCCCeEEEEECCC-----CcEEEEEECCC--c
Confidence 56777 33332111 124566888844333355553 68999999987 45555543211 1
Q ss_pred EEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 157 WRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 157 ~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
...+....+.+++.+.||++.+.++..
T Consensus 182 -~~~~P~g~~~~~~~~~DG~~~~v~~~~ 208 (386)
T 3sjl_D 182 -YHIFPTAPDTFFMHCRDGSLAKVAFGT 208 (386)
T ss_dssp -EEEEEEETTEEEEEETTSCEEEEECCS
T ss_pred -ceeecCCCceeEEECCCCCEEEEECCC
Confidence 122222345666667777777777755
No 226
>3sjl_D Methylamine dehydrogenase heavy chain; MAUG, C-heme, quinone cofactor, oxidoreductase-electron transport complex; HET: 0AF HEC MES; 1.63A {Paracoccus denitrificans} PDB: 2gc7_A* 2j55_H* 2j56_H* 2j57_G* 3l4m_D* 3l4o_D* 3orv_D* 3pxs_D* 3pxt_D* 3rlm_D* 2gc4_A* 3rn0_D* 3rn1_D* 3rmz_D* 3svw_D* 3sws_D* 3sxt_D* 3pxw_D* 3sle_D* 1mg2_A* ...
Probab=97.75 E-value=0.0013 Score=49.41 Aligned_cols=146 Identities=10% Similarity=0.026 Sum_probs=85.8
Q ss_pred EEEECCCCCCcEEEEEe----------CCCcEEEEEcCCcccccceeccc--eeccCCCeeeEEEccCCCcccce-----
Q psy13207 30 DVKFGPKQLGLVLATCA----------ADGLVRIYEAPDVMNLSQWCLQH--EVACPTLASCLTWNHSFSRFNSI----- 92 (197)
Q Consensus 30 ~~~~~~~~~~~~l~s~~----------~dg~v~iw~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~~~~~----- 92 (197)
.+.++|+ |++++.++ .++.|.+||..+.+.+..+.... ..........+.++|+++++..+
T Consensus 82 ~va~spD--G~~lyVan~~~~r~~~G~~~~~VsviD~~t~~v~~~I~v~~g~r~~~g~~P~~~a~spDGk~lyVan~~~~ 159 (386)
T 3sjl_D 82 NPVVADD--GSFIAHASTVFSRIARGERTDYVEVFDPVTLLPTADIELPDAPRFLVGTYPWMTSLTPDGKTLLFYQFSPA 159 (386)
T ss_dssp EEEECTT--SSCEEEEEEEEEETTEEEEEEEEEEECTTTCCEEEEEEETTCCCCCBSCCGGGEEECTTSSEEEEEECSSS
T ss_pred cEEECCC--CCEEEEEcccccccccCCCCCEEEEEECCCCeEEEEEECCCccccccCCCCceEEEcCCCCEEEEEEcCCC
Confidence 3999999 88776665 36789999999887655443221 11112356789999999975322
Q ss_pred --eEEEE------eeEecccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccC-CcccceeeeeeecCceecE-EEEE
Q psy13207 93 --SIMYE------AHSINAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVM-GTRFDIETIGNFEDHYCTV-WRVS 160 (197)
Q Consensus 93 --~~~~~------~~~~~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~-~~~~~~~~~~~~~~h~~~v-~~~~ 160 (197)
+.++| +..+. . ... ...+. .+.+ ++.+.||.+.+.++.+ ++.. ......+..-..++ ....
T Consensus 160 ~~VsVID~~t~~vv~tI~-v--~g~-~~~~P~g~~~~--~~~~~DG~~~~v~~~~~g~v~-~~~~~~~~~~~~~~~~~~~ 232 (386)
T 3sjl_D 160 PAVGVVDLEGKAFKRMLD-V--PDC-YHIFPTAPDTF--FMHCRDGSLAKVAFGTEGTPE-ITHTEVFHPEDEFLINHPA 232 (386)
T ss_dssp CEEEEEETTTTEEEEEEE-C--CSE-EEEEEEETTEE--EEEETTSCEEEEECCSSSCCE-EEECCCCSCTTSCBCSCCE
T ss_pred CeEEEEECCCCcEEEEEE-C--CCc-ceeecCCCcee--EEECCCCCEEEEECCCCCeEE-Eeecceeccccccccccce
Confidence 56777 33333 1 111 12233 4445 7888999999999865 2211 00001111111222 1246
Q ss_pred Ec-cCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 161 WN-ITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 161 ~~-p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
|. ++|++++ .+.+|.|++.|+...
T Consensus 233 ~~~~dG~~~~-vs~~g~V~v~d~~~~ 257 (386)
T 3sjl_D 233 YSQKAGRLVW-PTYTGKIHQIDLSSG 257 (386)
T ss_dssp EETTTTEEEE-EBTTSEEEEEECTTS
T ss_pred eEcCCCcEEE-EeCCCEEEEEECCCC
Confidence 64 6776554 566899999999654
No 227
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.69 E-value=0.0038 Score=47.72 Aligned_cols=152 Identities=14% Similarity=0.179 Sum_probs=89.6
Q ss_pred eeEEEECCCCCCcEEEEEeCC------CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce---------
Q psy13207 28 VTDVKFGPKQLGLVLATCAAD------GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--------- 92 (197)
Q Consensus 28 v~~~~~~~~~~~~~l~s~~~d------g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------- 92 (197)
-..+...|+ | +++++..+ |.+.+.|..+.+.+.++...... ......+-|+|+++.+.++
T Consensus 140 Ph~~~~~pd--G-i~Vs~~g~~~g~~~g~v~vlD~~T~~v~~~~~~~~~~--~~~~Yd~~~~p~~~~mvsS~wg~p~~~~ 214 (462)
T 2ece_A 140 LHTVHCGPD--A-IYISALGNEEGEGPGGILMLDHYSFEPLGKWEIDRGD--QYLAYDFWWNLPNEVLVSSEWAVPNTIE 214 (462)
T ss_dssp EEEEEECSS--C-EEEEEEEETTSCSCCEEEEECTTTCCEEEECCSBCTT--CCCCCCEEEETTTTEEEECBCCCHHHHT
T ss_pred ccceeECCC--e-EEEEcCCCcCCCCCCeEEEEECCCCeEEEEEccCCCC--ccccceEEECCCCCEEEEccCcCccccc
Confidence 344567888 8 77777665 78999999988776655532110 1223356778877764322
Q ss_pred ---------------eEEEE------eeEeccc-CCCceeEEEE--cCCC-eEEEEee-----CCCeEEEEEccCCcccc
Q psy13207 93 ---------------SIMYE------AHSINAE-HKDLIHDVAY--DYYG-LRMATCS-----SDQNIKVTRDVMGTRFD 142 (197)
Q Consensus 93 ---------------~~~~~------~~~~~~~-~~~~i~~~~~--~~~~-~~~~s~~-----~d~~i~~~d~~~~~~~~ 142 (197)
+.+|| +..+..+ .......+.| +++. ..++++- .++.|.+|..+.+. +.
T Consensus 215 ~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~~g~~P~~i~f~~~Pdg~~aYV~~e~~~~~Lss~V~v~~~d~g~-~~ 293 (462)
T 2ece_A 215 DGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGEENRMALELRPLHDPTKLMGFINMVVSLKDLSSSIWLWFYEDGK-WN 293 (462)
T ss_dssp TCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCTTEEEEEEEEECSSTTCCEEEEEEEEETTTCCEEEEEEEEETTE-EE
T ss_pred cccchhhhhhccCCEEEEEECCCCcEeeEEecCCCCCccceeEeeECCCCCEEEEEEeeeccCCCceEEEEEecCCc-ee
Confidence 67888 3344411 1234566767 5433 2234454 66788776654321 11
Q ss_pred eeeeeeecCc----------------eecEEEEEEccCCCEEEEEe-CCCcEEEEEcCCC
Q psy13207 143 IETIGNFEDH----------------YCTVWRVSWNITGTIVASSG-DDGCVRLWKLKKK 185 (197)
Q Consensus 143 ~~~~~~~~~h----------------~~~v~~~~~~p~~~~l~~~~-~dg~i~iw~~~~~ 185 (197)
...+..+... ......+.++|||++|.++. ..+.|.+||+...
T Consensus 294 ~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~VavfdV~d~ 353 (462)
T 2ece_A 294 AEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGEVRQYDISNP 353 (462)
T ss_dssp EEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTEEEEEECSST
T ss_pred EEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCEEEEEEecCC
Confidence 1111111110 13467899999999998876 4689999998643
No 228
>2mad_H Methylamine dehydrogenase (heavy subunit); oxidoreductase(CHNH2(D)-deaminating); HET: TRQ; 2.25A {Paracoccus versutus} SCOP: b.69.2.1 PDB: 1mae_H* 1maf_H*
Probab=97.63 E-value=0.0014 Score=48.93 Aligned_cols=121 Identities=16% Similarity=0.015 Sum_probs=69.2
Q ss_pred ECCCCCCcEEEEEeC--CC---cEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccCCC
Q psy13207 33 FGPKQLGLVLATCAA--DG---LVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKD 107 (197)
Q Consensus 33 ~~~~~~~~~l~s~~~--dg---~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 107 (197)
..|+ ++++..... .+ +|.++|..+.+.+. .++..... .+.++|+++++..+-..
T Consensus 28 ~~~~--~~~~yv~~~~~~~~~~~v~v~D~~t~~~~~------~i~~g~~p-~i~~spDg~~lyv~n~~------------ 86 (373)
T 2mad_H 28 PGAD--GRRSYINLPAHHSAIIQQWVLDAGSGSILG------HVNGGFLP-NPVAAHSGSEFALASTS------------ 86 (373)
T ss_pred CCCC--CCEEEEeCCcccCCccEEEEEECCCCeEEE------EecCCCCC-CeEECCCCCEEEEEecc------------
Confidence 3455 666666553 33 88999998775432 22222222 66666666553221000
Q ss_pred ceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCc-------eecEEEEEEccCCCEEEEEeC--CCcEE
Q psy13207 108 LIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDH-------YCTVWRVSWNITGTIVASSGD--DGCVR 178 (197)
Q Consensus 108 ~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~p~~~~l~~~~~--dg~i~ 178 (197)
.... .-+..++.|.+||..+ .+.+..+... ......+.|+|||++|+.+.. +++|.
T Consensus 87 --------~~~~--~rg~~~~~v~viD~~t-----~~~~~~i~~~~~~~~~~g~~p~~~~~spDG~~l~v~n~~~~~~v~ 151 (373)
T 2mad_H 87 --------FSRI--AKGKRTDYVEVFDPVT-----FLPIADIELPDAPRFDVGPYSWMNANTPNNADLLFFQFAAGPAVG 151 (373)
T ss_pred --------cccc--ccCCCCCeEEEEECCC-----CcEEEEEECCCccccccCCCccceEECCCCCEEEEEecCCCCeEE
Confidence 0000 1122467889999876 3333332111 123457999999999998874 57899
Q ss_pred EEEcCCCcchhh
Q psy13207 179 LWKLKKKRKKKK 190 (197)
Q Consensus 179 iw~~~~~~~~~~ 190 (197)
++| .+++....
T Consensus 152 viD-~t~~~~~~ 162 (373)
T 2mad_H 152 LVV-QGGSSDDQ 162 (373)
T ss_pred EEE-CCCCEEeE
Confidence 999 88765544
No 229
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=97.42 E-value=0.0068 Score=49.59 Aligned_cols=155 Identities=10% Similarity=0.048 Sum_probs=79.4
Q ss_pred CCCc-ceeEEEEC-CCCCCcEEEEE-eCCC----cEEEEEcCCc-ccccceeccceeccCCCeeeEEEccCCCcccce--
Q psy13207 23 DSRT-SVTDVKFG-PKQLGLVLATC-AADG----LVRIYEAPDV-MNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-- 92 (197)
Q Consensus 23 ~h~~-~v~~~~~~-~~~~~~~l~s~-~~dg----~v~iw~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 92 (197)
+|.- .+...+|+ |+ |++||-+ +.+| +|+++|+.++ +.+.. .+ ......+.|+|+++.|+..
T Consensus 170 ~~~~~~~~~~~~S~PD--G~~lAy~~~~~G~~~~~l~v~dl~~g~~~l~~-----~~--~~~~~~~~WspDg~~l~y~~~ 240 (751)
T 2xe4_A 170 GKAFCDVMEVKPAPPE--HDLVAFSVDMSGNEVYTIEFKRISDPSQTIAD-----KV--SGTNGEIVWGPDHTSLFYVTK 240 (751)
T ss_dssp TCSCCEEEEEEECTTT--TCEEEEEEESSSSSCEEEEEEETTCTTCCCCC-----CE--EEECSCCEECSSTTEEEEEEE
T ss_pred CCCeEEEeeeEecCCC--CCEEEEEEeCCCCceEEEEEEECCCCCEeCCc-----cc--cCceeeEEEecCCCEEEEEEE
Confidence 4443 67889999 99 8877644 3333 5999999887 53211 11 1124578999999876432
Q ss_pred ------eEEE--Ee--------eEecccCCCceeEEEEc--CCCeEEEEee-CCCeEEEEEccCCcccceee--eeeecC
Q psy13207 93 ------SIMY--EA--------HSINAEHKDLIHDVAYD--YYGLRMATCS-SDQNIKVTRDVMGTRFDIET--IGNFED 151 (197)
Q Consensus 93 ------~~~~--~~--------~~~~~~~~~~i~~~~~~--~~~~~~~s~~-~d~~i~~~d~~~~~~~~~~~--~~~~~~ 151 (197)
..+| ++ ..+..........+.|+ +..+.+.+.. ....|.++|+.+.. ... ......
T Consensus 241 d~~~~~~~v~~~~lgt~~~~~~lv~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~~d~~~~~---~~~~~~~l~~~ 317 (751)
T 2xe4_A 241 DETLRENKVWRHVMGKLQSEDVCLYEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHLLDLRKGN---AHNTLEIVRPR 317 (751)
T ss_dssp CTTCCEEEEEEEETTSCGGGCEEEEECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEEEESSSCT---TCCCEEESSCC
T ss_pred CCCCCCCEEEEEECCCCchhcEEEEecCCCceEEEEEECCCCCEEEEEecCCCCceEEEEECCCCC---CCceeEEeecC
Confidence 1333 31 11111122334567788 4444332222 24567778876521 111 111222
Q ss_pred ceecEEEEEEccCCCEEEEEeCC--C--cEEEEEcCCCcchh
Q psy13207 152 HYCTVWRVSWNITGTIVASSGDD--G--CVRLWKLKKKRKKK 189 (197)
Q Consensus 152 h~~~v~~~~~~p~~~~l~~~~~d--g--~i~iw~~~~~~~~~ 189 (197)
.....+.+.|+..+.+++.+..+ + .|..+++.+.+.|+
T Consensus 318 ~~~~~~s~~~~~g~~l~~~t~~~~a~~~~L~~~d~~~~~~~~ 359 (751)
T 2xe4_A 318 EKGVRYDVQMHGTSHLVILTNEGGAVNHKLLIAPRGQPSDWS 359 (751)
T ss_dssp CTTCCEEEEEETTTEEEEEECTTTCTTCEEEEEETTSTTCCC
T ss_pred CCCceEEEeeeeCCEEEEEeCCCCCCCcEEEEEcCCCcccce
Confidence 33445556655444444444333 3 45556665433444
No 230
>2ece_A 462AA long hypothetical selenium-binding protein; beta propeller, structural genomics, unknown function; 2.00A {Sulfolobus tokodaii}
Probab=97.30 E-value=0.019 Score=43.87 Aligned_cols=138 Identities=10% Similarity=-0.027 Sum_probs=79.4
Q ss_pred eeEEEECCCCCCcEEEEEe-------------------CCCcEEEEEcCCcccccceeccceeccCCCeeeEEE--ccCC
Q psy13207 28 VTDVKFGPKQLGLVLATCA-------------------ADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTW--NHSF 86 (197)
Q Consensus 28 v~~~~~~~~~~~~~l~s~~-------------------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~ 86 (197)
-..+.|+|+ ++.+++.. .+.+|.+||+.+.+.+.++.+.. .......+.| +|++
T Consensus 190 ~Yd~~~~p~--~~~mvsS~wg~p~~~~~g~~~~~~~~~~~d~V~v~D~~~~k~~~tI~vg~---~g~~P~~i~f~~~Pdg 264 (462)
T 2ece_A 190 AYDFWWNLP--NEVLVSSEWAVPNTIEDGLKLEHLKDRYGNRIHFWDLRKRKRIHSLTLGE---ENRMALELRPLHDPTK 264 (462)
T ss_dssp CCCEEEETT--TTEEEECBCCCHHHHTTCCCTTTHHHHSCCEEEEEETTTTEEEEEEESCT---TEEEEEEEEECSSTTC
T ss_pred cceEEECCC--CCEEEEccCcCccccccccchhhhhhccCCEEEEEECCCCcEeeEEecCC---CCCccceeEeeECCCC
Confidence 345788998 88888874 37899999998765444333210 0122344545 8888
Q ss_pred Ccccce-----------eEEEE--------eeE--ecc----c-----------CCCceeEEEEcCC-CeEEEEeeCCCe
Q psy13207 87 SRFNSI-----------SIMYE--------AHS--INA----E-----------HKDLIHDVAYDYY-GLRMATCSSDQN 129 (197)
Q Consensus 87 ~~~~~~-----------~~~~~--------~~~--~~~----~-----------~~~~i~~~~~~~~-~~~~~s~~~d~~ 129 (197)
++...+ +.+|. ... +.. . -......|.++++ .++.++.-..+.
T Consensus 265 ~~aYV~~e~~~~~Lss~V~v~~~d~g~~~~~~vIdi~~~~v~~~lp~~~~~f~~~~~~pa~I~lS~DGrfLYVSnrg~d~ 344 (462)
T 2ece_A 265 LMGFINMVVSLKDLSSSIWLWFYEDGKWNAEKVIEIPAEPLEGNLPEILKPFKAVPPLVTDIDISLDDKFLYLSLWGIGE 344 (462)
T ss_dssp CEEEEEEEEETTTCCEEEEEEEEETTEEEEEEEEEECCEECCSSCCGGGGGGTEECCCCCCEEECTTSCEEEEEETTTTE
T ss_pred CEEEEEEeeeccCCCceEEEEEecCCceeEEEEEeCCCccccccccccccccccCCCceeEEEECCCCCEEEEEeCCCCE
Confidence 764322 22211 111 110 0 0244678888833 333355556789
Q ss_pred EEEEEccCCcccceeeeeeecCc-----------e---ecEEEEEEccCCCEEEEEe
Q psy13207 130 IKVTRDVMGTRFDIETIGNFEDH-----------Y---CTVWRVSWNITGTIVASSG 172 (197)
Q Consensus 130 i~~~d~~~~~~~~~~~~~~~~~h-----------~---~~v~~~~~~p~~~~l~~~~ 172 (197)
|.+||+... ...+.+..+... . ..-..+.++|||++|+++.
T Consensus 345 VavfdV~d~--~~~~lv~~I~tGG~~~~~~~~~G~~~~ggPr~~~lSpDGk~LyVaN 399 (462)
T 2ece_A 345 VRQYDISNP--FKPVLTGKVKLGGIFHRADHPAGHKLTGAPQMLEISRDGRRVYVTN 399 (462)
T ss_dssp EEEEECSST--TSCEEEEEEECBTTTTCBCCTTSCCCCSCCCCEEECTTSSEEEEEC
T ss_pred EEEEEecCC--CCcEEEEEEEeCCeeccccccccccCCCCCCEEEEcCCCCEEEEEc
Confidence 999998532 112333333221 0 1247799999999999887
No 231
>3c75_H MADH, methylamine dehydrogenase heavy chain; copper proteins, electron transfer complex, TTQ, electron transport, oxidoreductase, periplasm, transport, metal- binding; HET: TRQ; 2.50A {Paracoccus versutus}
Probab=97.28 E-value=0.00097 Score=50.78 Aligned_cols=119 Identities=11% Similarity=-0.074 Sum_probs=71.6
Q ss_pred CcEEEEEeC-C----CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccCCCceeEEE
Q psy13207 39 GLVLATCAA-D----GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVA 113 (197)
Q Consensus 39 ~~~l~s~~~-d----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~ 113 (197)
+..++.... + +.|.+.|..+.+.+.++... ..+ .+.++|+++++..+-..
T Consensus 84 ~~~vyV~n~~~~~~~~~VsVID~~t~~vv~~I~vG-----~~P--gia~SpDgk~lyVan~~------------------ 138 (426)
T 3c75_H 84 ARRVYIQDPAHFAAITQQFVIDGSTGRILGMTDGG-----FLP--HPVAAEDGSFFAQASTV------------------ 138 (426)
T ss_dssp TTEEEEEECTTTCSSEEEEEEETTTTEEEEEEEEC-----SSC--EEEECTTSSCEEEEEEE------------------
T ss_pred CCEEEEECCCcCCCCCeEEEEECCCCEEEEEEECC-----CCC--ceEECCCCCEEEEEecc------------------
Confidence 555544443 3 69999999887655433321 222 67777777654321000
Q ss_pred EcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCc-------eecEEEEEEccCCCEEEEEeC--CCcEEEEEcCC
Q psy13207 114 YDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDH-------YCTVWRVSWNITGTIVASSGD--DGCVRLWKLKK 184 (197)
Q Consensus 114 ~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~p~~~~l~~~~~--dg~i~iw~~~~ 184 (197)
.... ..|..++.|.++|..+ .+.+..+.-- ......+.++|||++++.+.. +++|.+.|+.+
T Consensus 139 --~~~~--~~G~~~~~VsviD~~t-----~~vv~~I~v~g~~r~~~g~~P~~~~~spDGk~lyV~n~~~~~~VsVID~~t 209 (426)
T 3c75_H 139 --FERI--ARGKRTDYVEVFDPVT-----FLPIADIELPDAPRFLVGTYQWMNALTPDNKNLLFYQFSPAPAVGVVDLEG 209 (426)
T ss_dssp --EEET--TEEEEEEEEEEECTTT-----CCEEEEEEETTCCCCCBSCCGGGSEECTTSSEEEEEECSSSCEEEEEETTT
T ss_pred --cccc--ccCCCCCEEEEEECCC-----CcEEEEEECCCccccccCCCcceEEEcCCCCEEEEEecCCCCeEEEEECCC
Confidence 0000 1233567899999977 3444333210 122356899999999998874 57899999998
Q ss_pred Ccchhhh
Q psy13207 185 KRKKKKE 191 (197)
Q Consensus 185 ~~~~~~~ 191 (197)
.+....+
T Consensus 210 ~kvv~~I 216 (426)
T 3c75_H 210 KTFDRML 216 (426)
T ss_dssp TEEEEEE
T ss_pred CeEEEEE
Confidence 7765444
No 232
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=97.24 E-value=0.0017 Score=51.23 Aligned_cols=111 Identities=10% Similarity=-0.019 Sum_probs=70.6
Q ss_pred CCCeeeEEEccCCCcccce------eEEEEeeEe----------------cccCCCceeEEEEcCCCeEEEEeeCCCeEE
Q psy13207 74 PTLASCLTWNHSFSRFNSI------SIMYEAHSI----------------NAEHKDLIHDVAYDYYGLRMATCSSDQNIK 131 (197)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~----------------~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~ 131 (197)
.....++.++|||+++..+ +.++|+... ...-....+.++|+++....++.-.|+.|.
T Consensus 276 g~~PhGv~~sPDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~vG~gP~h~aF~~dG~aY~t~~ldsqV~ 355 (595)
T 1fwx_A 276 ANNPHGCNMAPDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPELGLGPLHTAFDGRGNAYTSLFLDSQVV 355 (595)
T ss_dssp ESSCCCEEECTTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBCCSCEEEEEECTTSEEEEEETTTTEEE
T ss_pred CCCceEEEEcCCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCCCCCcceEEECCCCeEEEEEecCCcEE
Confidence 4567899999999987554 788883321 112235678899996555446777899999
Q ss_pred EEEccCCcc-----cceeeeeeecCceecE-----EEEEEccCCCEEEEEeC---CCcE----------EEEEcCC
Q psy13207 132 VTRDVMGTR-----FDIETIGNFEDHYCTV-----WRVSWNITGTIVASSGD---DGCV----------RLWKLKK 184 (197)
Q Consensus 132 ~~d~~~~~~-----~~~~~~~~~~~h~~~v-----~~~~~~p~~~~l~~~~~---dg~i----------~iw~~~~ 184 (197)
+||+..... .....+..+..|..+- ..+.++|||++|+++.. |..+ .++|+..
T Consensus 356 kwdi~~a~~~~~g~~~~~vi~kidV~yqpGh~~~~~g~t~~~DGk~l~~~Nk~skdr~~~~gp~~~~~~ql~dis~ 431 (595)
T 1fwx_A 356 KWNIEDAIRAYAGEKVDPIKDKLDVHYQPGHLKTVMGETLDATNDWLVCLSKFSKDRFLNVGPLKPENDQLIDISG 431 (595)
T ss_dssp EEEHHHHHHHHHTCSCCCEEEEEECSSCEEEEEETTTTSTTCCSSEEEEEESCCTTSSCCCCSSCCEEEEEEECSS
T ss_pred EEEhhHhhhhhcccccceeEEEeecccccccceeccceEeCCCCCEEEEcCCCCccccccCCCCCCCcceEEEcCC
Confidence 999864100 0023444554443321 23356899999998753 4321 7888843
No 233
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=97.20 E-value=0.033 Score=42.46 Aligned_cols=144 Identities=6% Similarity=-0.003 Sum_probs=82.2
Q ss_pred ceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----------eEE
Q psy13207 27 SVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----------SIM 95 (197)
Q Consensus 27 ~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----------~~~ 95 (197)
....++++| + +..|..+...+.|+.+|+....... + .........++|+++++++..+ +..
T Consensus 138 ~P~~lavdp~~--~g~Lyv~d~~~~I~~id~~~~~v~~-~-----~~~~~~P~~ia~d~~G~~lyvad~~~~~~~~~v~~ 209 (430)
T 3tc9_A 138 GAVWLSFDPKN--HNHLYLVGEQHPTRLIDFEKEYVST-V-----YSGLSKVRTICWTHEADSMIITNDQNNNDRPNNYI 209 (430)
T ss_dssp CCCEEEEETTE--EEEEEEEEBTEEEEEEETTTTEEEE-E-----ECCCSCEEEEEECTTSSEEEEEECCSCTTSEEEEE
T ss_pred CCCEEEECCCC--CCeEEEEeCCCcEEEEECCCCEEEE-E-----ecCCCCcceEEEeCCCCEEEEEeCCCCcccceEEE
Confidence 456788997 4 4445555554788888887653211 1 1124567889999999844222 111
Q ss_pred EE----e---eEecccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCE
Q psy13207 96 YE----A---HSINAEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTI 167 (197)
Q Consensus 96 ~~----~---~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 167 (197)
++ . ..+. .......+++++ +..++++-...+.|..++..... ...+..... ......++|+|+|++
T Consensus 210 ~~~~g~~~~~~~l~--~~~~p~giavdp~~g~lyv~d~~~~~V~~~~~~~~~---~~~~~~~~~-~~~P~gia~~pdG~~ 283 (430)
T 3tc9_A 210 LTRESGFKVITELT--KGQNCNGAETHPINGELYFNSWNAGQVFRYDFTTQE---TTPLFTIQD-SGWEFHIQFHPSGNY 283 (430)
T ss_dssp EEGGGTSCSEEEEE--ECSSCCCEEECTTTCCEEEEETTTTEEEEEETTTTE---EEEEEECSS-SSCCEEEEECTTSSE
T ss_pred EeCCCceeeeeeec--cCCCceEEEEeCCCCEEEEEECCCCEEEEEECCCCc---EEEEEEcCC-CCcceeEEEcCCCCE
Confidence 22 1 1111 123345666764 33333555567788888876421 111222221 234578999999994
Q ss_pred -EEEEeCCCcEEEEEcCC
Q psy13207 168 -VASSGDDGCVRLWKLKK 184 (197)
Q Consensus 168 -l~~~~~dg~i~iw~~~~ 184 (197)
.++-...+.|..++.+.
T Consensus 284 lyv~d~~~~~I~~~~~d~ 301 (430)
T 3tc9_A 284 AYIVVVNQHYILRSDYDW 301 (430)
T ss_dssp EEEEETTTTEEEEEEEET
T ss_pred EEEEECCCCEEEEEeCCc
Confidence 45555678899988763
No 234
>2iwa_A Glutamine cyclotransferase; pyroglutamate, acyltransferase, glutaminyl CYCL N-terminal cyclisation; HET: NAG; 1.6A {Carica papaya} PDB: 2faw_A*
Probab=96.96 E-value=0.053 Score=38.50 Aligned_cols=135 Identities=10% Similarity=0.003 Sum_probs=82.2
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE------eeEeccc-CC
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE------AHSINAE-HK 106 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~~-~~ 106 (197)
++..++.-.++.+.++|..+.+.+.++... .-....++++++.+..+ +.++| +..+..+ +.
T Consensus 76 ~~lyv~t~~~~~v~viD~~t~~v~~~i~~g-------~~~g~glt~Dg~~l~vs~gs~~l~viD~~t~~v~~~I~Vg~~~ 148 (266)
T 2iwa_A 76 EKLYQVVWLKNIGFIYDRRTLSNIKNFTHQ-------MKDGWGLATDGKILYGSDGTSILYEIDPHTFKLIKKHNVKYNG 148 (266)
T ss_dssp TEEEEEETTCSEEEEEETTTTEEEEEEECC-------SSSCCEEEECSSSEEEECSSSEEEEECTTTCCEEEEEECEETT
T ss_pred CEEEEEEecCCEEEEEECCCCcEEEEEECC-------CCCeEEEEECCCEEEEECCCCeEEEEECCCCcEEEEEEECCCC
Confidence 455566667899999999987766554322 01123355566665433 56666 2232211 11
Q ss_pred ---CceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCc-------------eecEEEEEEccCCC-EEE
Q psy13207 107 ---DLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDH-------------YCTVWRVSWNITGT-IVA 169 (197)
Q Consensus 107 ---~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h-------------~~~v~~~~~~p~~~-~l~ 169 (197)
..++.+.|....+ ++....++.|.+.|..+ ++.+..+.-. ....+.++|+|+++ +++
T Consensus 149 ~p~~~~nele~~dg~l-yvn~~~~~~V~vID~~t-----g~V~~~I~~~g~~~~~~~~~~~~~~v~nGIa~~~~~~~lfV 222 (266)
T 2iwa_A 149 HRVIRLNELEYINGEV-WANIWQTDCIARISAKD-----GTLLGWILLPNLRKKLIDEGFRDIDVLNGIAWDQENKRIFV 222 (266)
T ss_dssp EECCCEEEEEEETTEE-EEEETTSSEEEEEETTT-----CCEEEEEECHHHHHHHHHTTCTTCCCEEEEEEETTTTEEEE
T ss_pred cccccceeEEEECCEE-EEecCCCCeEEEEECCC-----CcEEEEEECCCcccccccccccccCceEEEEEcCCCCEEEE
Confidence 2356777773223 25555678999999987 4444444321 13568999999875 555
Q ss_pred EEeCCCcEEEEEcCCCc
Q psy13207 170 SSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 170 ~~~~dg~i~iw~~~~~~ 186 (197)
++...+.+...++....
T Consensus 223 Tgk~~~~v~~i~l~~~~ 239 (266)
T 2iwa_A 223 TGKLWPKLFEIKLHLVR 239 (266)
T ss_dssp EETTCSEEEEEEEEECC
T ss_pred ECCCCCeEEEEEEeccc
Confidence 56678899998886543
No 235
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.88 E-value=0.037 Score=39.82 Aligned_cols=140 Identities=11% Similarity=-0.020 Sum_probs=78.2
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----eEEEE---
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----SIMYE--- 97 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~--- 97 (197)
...+.++...++ +.+++.. +.|..+| .+++..-... .....+.++...+++...+.+ +..++
T Consensus 176 ~~~~~~~~~d~~--g~l~v~t---~~l~~~d-~~g~~~~~~~-----~~~~~~~~~~~~~~g~l~v~t~~~gl~~~~~~g 244 (330)
T 3hxj_A 176 DAITSAASIGKD--GTIYFGS---DKVYAIN-PDGTEKWNFY-----AGYWTVTRPAISEDGTIYVTSLDGHLYAINPDG 244 (330)
T ss_dssp SCCCSCCEECTT--CCEEEES---SSEEEEC-TTSCEEEEEC-----CSSCCCSCCEECTTSCEEEEETTTEEEEECTTS
T ss_pred CCceeeeEEcCC--CEEEEEe---CEEEEEC-CCCcEEEEEc-----cCCcceeceEECCCCeEEEEcCCCeEEEECCCC
Confidence 344566666665 6655443 7888888 5543321111 113456777777776654432 44444
Q ss_pred --eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC
Q psy13207 98 --AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD 174 (197)
Q Consensus 98 --~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d 174 (197)
+..+. .....+..+... ...+ ..++.++.+..+|. + .+.+..+......+.++...++|+ |..++.+
T Consensus 245 ~~~~~~~-~~~~~~~~~~~~~~g~l--~v~t~~ggl~~~d~-~-----g~~~~~~~~~~~~~~~~~~d~~g~-l~~gt~~ 314 (330)
T 3hxj_A 245 TEKWRFK-TGKRIESSPVIGNTDTI--YFGSYDGHLYAINP-D-----GTEKWNFETGSWIIATPVIDENGT-IYFGTRN 314 (330)
T ss_dssp CEEEEEE-CSSCCCSCCEECTTSCE--EEECTTCEEEEECT-T-----SCEEEEEECSSCCCSCCEECTTCC-EEEECTT
T ss_pred CEeEEee-CCCCccccceEcCCCeE--EEecCCCCEEEECC-C-----CcEEEEEEcCCccccceEEcCCCE-EEEEcCC
Confidence 22222 222223344455 5556 67888888888885 3 233333333344566777777876 5568889
Q ss_pred CcEEEEEcCCC
Q psy13207 175 GCVRLWKLKKK 185 (197)
Q Consensus 175 g~i~iw~~~~~ 185 (197)
|.+++...+..
T Consensus 315 G~~~~~~~~~~ 325 (330)
T 3hxj_A 315 GKFYALFNLEH 325 (330)
T ss_dssp SCEEEEEC---
T ss_pred CeEEEEecccc
Confidence 99998876543
No 236
>1mda_H Methylamine dehydrogenase (heavy subunit); electron transport; HET: TRQ; 2.50A {Paracoccus denitrificans} SCOP: b.69.2.1
Probab=96.78 E-value=0.0035 Score=46.77 Aligned_cols=54 Identities=11% Similarity=-0.079 Sum_probs=38.0
Q ss_pred CCCeEEEEEccCCcccceeeeeeecCc-------eecEEEEEEccCCCEEEEEeC--CCcEEE--EEcCC
Q psy13207 126 SDQNIKVTRDVMGTRFDIETIGNFEDH-------YCTVWRVSWNITGTIVASSGD--DGCVRL--WKLKK 184 (197)
Q Consensus 126 ~d~~i~~~d~~~~~~~~~~~~~~~~~h-------~~~v~~~~~~p~~~~l~~~~~--dg~i~i--w~~~~ 184 (197)
.++.|.+||..+ .+.+..+... ......++++|||++++.+.. +..+.+ +|..+
T Consensus 94 ~~~~VsviD~~T-----~~vv~~I~v~~~~~~~~g~~P~~ia~SpDGk~lyVan~~~~~~v~V~~iD~~t 158 (368)
T 1mda_H 94 RTDYVEVFDPVT-----FLPIADIELPDAPRFSVGPRVHIIGNCASSACLLFFLFGSSAAAGLSVPGASD 158 (368)
T ss_dssp EEEEEEEECTTT-----CCEEEEEEETTSCSCCBSCCTTSEEECTTSSCEEEEECSSSCEEEEEETTTEE
T ss_pred CCCEEEEEECCC-----CCEEEEEECCCccccccCCCcceEEEcCCCCEEEEEccCCCCeEEEEEEchhh
Confidence 478899999987 4555554321 022457999999999988864 457888 88865
No 237
>3nol_A Glutamine cyclotransferase; beta-propeller, glutaminyl cyclase, pyrogl transferase; 1.70A {Zymomonas mobilis} PDB: 3nom_A
Probab=96.64 E-value=0.085 Score=37.29 Aligned_cols=120 Identities=8% Similarity=0.082 Sum_probs=69.7
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE------eeEecc-cCC
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE------AHSINA-EHK 106 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~-~~~ 106 (197)
+++.+..-.++.+.++|..+.+.+.++.... ....+++++..+..+ +.++| +..+.. ...
T Consensus 97 ~~ly~ltw~~~~v~v~D~~t~~~~~ti~~~~--------eG~glt~dg~~L~~SdGs~~i~~iDp~T~~v~~~I~V~~~g 168 (262)
T 3nol_A 97 DKIVGLTWKNGLGFVWNIRNLRQVRSFNYDG--------EGWGLTHNDQYLIMSDGTPVLRFLDPESLTPVRTITVTAHG 168 (262)
T ss_dssp TEEEEEESSSSEEEEEETTTCCEEEEEECSS--------CCCCEEECSSCEEECCSSSEEEEECTTTCSEEEEEECEETT
T ss_pred CEEEEEEeeCCEEEEEECccCcEEEEEECCC--------CceEEecCCCEEEEECCCCeEEEEcCCCCeEEEEEEeccCC
Confidence 3444555568999999999887665554321 222333455554322 56666 223221 111
Q ss_pred ---CceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC------------ceecEEEEEEccCCCEEEE
Q psy13207 107 ---DLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED------------HYCTVWRVSWNITGTIVAS 170 (197)
Q Consensus 107 ---~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~------------h~~~v~~~~~~p~~~~l~~ 170 (197)
..++.+.|. +..+ +..-.++.|.+.|.++ ++.+..+.. -....+.++|+|+++.|..
T Consensus 169 ~~~~~lNELe~~~G~ly--an~w~~~~I~vIDp~t-----G~V~~~Id~~~L~~~~~~~~~~~~vlNGIA~dp~~~~lfV 241 (262)
T 3nol_A 169 EELPELNELEWVDGEIF--ANVWQTNKIVRIDPET-----GKVTGIIDLNGILAEAGPLPSPIDVLNGIAWDKEHHRLFV 241 (262)
T ss_dssp EECCCEEEEEEETTEEE--EEETTSSEEEEECTTT-----CBEEEEEECTTGGGGSCSCCSSCCCEEEEEEETTTTEEEE
T ss_pred ccccccceeEEECCEEE--EEEccCCeEEEEECCC-----CcEEEEEECCcCccccccccCcCCceEEEEEcCCCCEEEE
Confidence 334567777 4333 6666788999999987 333333221 0234589999998777776
Q ss_pred EeC
Q psy13207 171 SGD 173 (197)
Q Consensus 171 ~~~ 173 (197)
.+.
T Consensus 242 TGK 244 (262)
T 3nol_A 242 TGK 244 (262)
T ss_dssp EET
T ss_pred ECC
Confidence 664
No 238
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.59 E-value=0.11 Score=36.70 Aligned_cols=127 Identities=7% Similarity=0.082 Sum_probs=72.2
Q ss_pred eeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEe
Q psy13207 19 SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEA 98 (197)
Q Consensus 19 ~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 98 (197)
+.+.+-...+..++|+|+. +.++++...++.|...|+. ++.++.+.+
T Consensus 20 ~~l~g~~~~lSGla~~~~~-~~L~aV~d~~~~I~~ld~~-g~v~~~i~l------------------------------- 66 (255)
T 3qqz_A 20 KEIAGITNNISSLTWSAQS-NTLFSTINKPAAIVEMTTN-GDLIRTIPL------------------------------- 66 (255)
T ss_dssp EECTTCCSCEEEEEEETTT-TEEEEEEETTEEEEEEETT-CCEEEEEEC-------------------------------
T ss_pred eECCCcccCcceeEEeCCC-CEEEEEECCCCeEEEEeCC-CCEEEEEec-------------------------------
Confidence 3567777789999999972 4566667788888888876 443322211
Q ss_pred eEecccCCCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccc-eeeee-ee--cCceecEEEEEEccCCCEEEEEeCC
Q psy13207 99 HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFD-IETIG-NF--EDHYCTVWRVSWNITGTIVASSGDD 174 (197)
Q Consensus 99 ~~~~~~~~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~-~~~~~-~~--~~h~~~v~~~~~~p~~~~l~~~~~d 174 (197)
.-......|++.++..++++.-.++.+.++++....... ..... .+ ...+...-.++|+|.++.|.++...
T Consensus 67 -----~g~~D~EGIa~~~~g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~ 141 (255)
T 3qqz_A 67 -----DFVKDLETIEYIGDNQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEK 141 (255)
T ss_dssp -----SSCSSEEEEEECSTTEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEES
T ss_pred -----CCCCChHHeEEeCCCEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECc
Confidence 111234455555322222443345667777665421100 01110 11 1224456899999998777777766
Q ss_pred CcEEEEEcC
Q psy13207 175 GCVRLWKLK 183 (197)
Q Consensus 175 g~i~iw~~~ 183 (197)
....+|.++
T Consensus 142 ~p~~i~~~~ 150 (255)
T 3qqz_A 142 NPIEVYKVN 150 (255)
T ss_dssp SSEEEEEEE
T ss_pred CCceEEEEc
Confidence 566666654
No 239
>2hz6_A Endoplasmic reticulum to nucleus signalling 1 isoform 1 variant; triangular beta-sheet cluster, signaling protein; 3.10A {Homo sapiens}
Probab=96.52 E-value=0.002 Score=48.03 Aligned_cols=63 Identities=11% Similarity=0.046 Sum_probs=38.8
Q ss_pred CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 116 YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 116 ~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
+..+ ++++.|+.|+.||..+ ++.+-.+.. ..+.+..+.+++..+++++.||.|+.||..+++.
T Consensus 9 ~~~v--~~gs~dg~v~a~d~~t-----G~~~W~~~~--~~~~s~p~~~~g~~~v~~s~dg~l~a~d~~tG~~ 71 (369)
T 2hz6_A 9 ETLL--FVSTLDGSLHAVSKRT-----GSIKWTLKE--DPVLQVPTHVEEPAFLPDPNDGSLYTLGSKNNEG 71 (369)
T ss_dssp TTEE--EEEETTSEEEEEETTT-----CCEEEEEEC--CCSCCCC-----CCEEECTTTCCEEEC-----CC
T ss_pred CCEE--EEEcCCCEEEEEECCC-----CCEEEEecC--CCceecceEcCCCEEEEeCCCCEEEEEECCCCce
Confidence 4556 8899999999999977 444444433 3444445556787888888999999999987654
No 240
>3hxj_A Pyrrolo-quinoline quinone; all beta protein. incomplete 8-blade beta-propeller., struct genomics, PSI-2, protein structure initiative; 2.00A {Methanococcus maripaludis}
Probab=96.48 E-value=0.088 Score=37.82 Aligned_cols=138 Identities=8% Similarity=-0.080 Sum_probs=77.8
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc--eeEEEE-----e
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS--ISIMYE-----A 98 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~-----~ 98 (197)
..+.++...++ +. +..++.++.|..+|.. ++....+.. ....+.++...+++..++. ++..++ +
T Consensus 137 ~~~~~~~~~~~--g~-l~vgt~~~~l~~~d~~-g~~~~~~~~-----~~~~~~~~~~d~~g~l~v~t~~l~~~d~~g~~~ 207 (330)
T 3hxj_A 137 AIYATPIVSED--GT-IYVGSNDNYLYAINPD-GTEKWRFKT-----NDAITSAASIGKDGTIYFGSDKVYAINPDGTEK 207 (330)
T ss_dssp CCCSCCEECTT--SC-EEEECTTSEEEEECTT-SCEEEEEEC-----SSCCCSCCEECTTCCEEEESSSEEEECTTSCEE
T ss_pred ceeeeeEEcCC--CE-EEEEcCCCEEEEECCC-CCEeEEEec-----CCCceeeeEEcCCCEEEEEeCEEEEECCCCcEE
Confidence 34555666665 65 5567778999999987 543322221 1234555666666655432 244444 1
Q ss_pred eEecccCCCceeEEEEcCC-CeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcE
Q psy13207 99 HSINAEHKDLIHDVAYDYY-GLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCV 177 (197)
Q Consensus 99 ~~~~~~~~~~i~~~~~~~~-~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i 177 (197)
.... .....+.++...++ .+ ..++.++.+..+|.. ...+..+......+..+...+++. |..++.+|.+
T Consensus 208 ~~~~-~~~~~~~~~~~~~~g~l--~v~t~~~gl~~~~~~------g~~~~~~~~~~~~~~~~~~~~~g~-l~v~t~~ggl 277 (330)
T 3hxj_A 208 WNFY-AGYWTVTRPAISEDGTI--YVTSLDGHLYAINPD------GTEKWRFKTGKRIESSPVIGNTDT-IYFGSYDGHL 277 (330)
T ss_dssp EEEC-CSSCCCSCCEECTTSCE--EEEETTTEEEEECTT------SCEEEEEECSSCCCSCCEECTTSC-EEEECTTCEE
T ss_pred EEEc-cCCcceeceEECCCCeE--EEEcCCCeEEEECCC------CCEeEEeeCCCCccccceEcCCCe-EEEecCCCCE
Confidence 1222 23345667777743 56 667778888888753 223333332222333455565665 6667778889
Q ss_pred EEEEc
Q psy13207 178 RLWKL 182 (197)
Q Consensus 178 ~iw~~ 182 (197)
..+|.
T Consensus 278 ~~~d~ 282 (330)
T 3hxj_A 278 YAINP 282 (330)
T ss_dssp EEECT
T ss_pred EEECC
Confidence 99985
No 241
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=96.46 E-value=0.036 Score=44.81 Aligned_cols=58 Identities=14% Similarity=0.054 Sum_probs=41.3
Q ss_pred CCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 127 DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 127 d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
.+.|..||..+ ++.+-.+. +..+++...+..++.+++.++.||.+++||.++++.+..
T Consensus 456 ~g~l~A~D~~t-----G~~~W~~~-~~~~~~~g~~~~~g~~v~~g~~dg~l~a~D~~tG~~lw~ 513 (677)
T 1kb0_A 456 FGRLLAWDPVA-----QKAAWSVE-HVSPWNGGTLTTAGNVVFQGTADGRLVAYHAATGEKLWE 513 (677)
T ss_dssp EEEEEEEETTT-----TEEEEEEE-ESSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEEE
T ss_pred ccEEEEEeCCC-----CcEEeecC-CCCCCcCcceEeCCCEEEEECCCCcEEEEECCCCceeee
Confidence 37899999977 34433332 223344555667788899999999999999999876543
No 242
>3qqz_A Putative uncharacterized protein YJIK; MCSG, PSI-2, structural genomics, midwest center for structu genomics, TOLB-like, Ca binding; 2.55A {Escherichia coli}
Probab=96.42 E-value=0.14 Score=36.11 Aligned_cols=148 Identities=7% Similarity=0.025 Sum_probs=86.2
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccc---cceecc-ceeccCCCeeeEEEccCCCcccce-----eEEEE
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNL---SQWCLQ-HEVACPTLASCLTWNHSFSRFNSI-----SIMYE 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~---~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~ 97 (197)
..-.+++.++ +.++++.-.++.+.++++.....+ ...... ...........++|+|.+..|..+ ..+|.
T Consensus 71 D~EGIa~~~~--g~~~vs~E~~~~l~~~~v~~~~~i~~~~~~~~~~~~~~~N~g~EGLA~d~~~~~L~va~E~~p~~i~~ 148 (255)
T 3qqz_A 71 DLETIEYIGD--NQFVISDERDYAIYVISLTPNSEVKILKKIKIPLQESPTNCGFEGLAYSRQDHTFWFFKEKNPIEVYK 148 (255)
T ss_dssp SEEEEEECST--TEEEEEETTTTEEEEEEECTTCCEEEEEEEECCCSSCCCSSCCEEEEEETTTTEEEEEEESSSEEEEE
T ss_pred ChHHeEEeCC--CEEEEEECCCCcEEEEEcCCCCeeeeeeeeccccccccccCCcceEEEeCCCCEEEEEECcCCceEEE
Confidence 4567778877 777677667788999988655421 111111 011235568999999998765433 24444
Q ss_pred ee---------Eec------ccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec-Cc------ee
Q psy13207 98 AH---------SIN------AEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE-DH------YC 154 (197)
Q Consensus 98 ~~---------~~~------~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~-~h------~~ 154 (197)
.. .+. ..+...+.+++++ ...-+++.....+.+..+|.... ......+. +. -.
T Consensus 149 ~~g~~~~~~l~i~~~~~~~~~~~~~d~S~l~~dp~tg~lliLS~~s~~L~~~d~~g~----~~~~~~L~~g~~~l~~~~~ 224 (255)
T 3qqz_A 149 VNGLLSSNELHISKDKALQRQFTLDDVSGAEFNQQKNTLLVLSHESRALQEVTLVGE----VIGEMSLTKGSRGLSHNIK 224 (255)
T ss_dssp EESTTCSSCCEEEECHHHHHTCCSSCCCEEEEETTTTEEEEEETTTTEEEEECTTCC----EEEEEECSTTGGGCSSCCC
T ss_pred EcccccCCceeeecchhhccccccCCceeEEEcCCCCeEEEEECCCCeEEEEcCCCC----EEEEEEcCCccCCcccccC
Confidence 21 111 0123457889998 22222266667788888997631 11222232 11 12
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEE
Q psy13207 155 TVWRVSWNITGTIVASSGDDGCVRLWK 181 (197)
Q Consensus 155 ~v~~~~~~p~~~~l~~~~~dg~i~iw~ 181 (197)
.--.++|.|+|++.++ +.-+.++.|.
T Consensus 225 qpEGia~d~~G~lyIv-sE~n~~y~f~ 250 (255)
T 3qqz_A 225 QAEGVAMDASGNIYIV-SEPNRFYRFT 250 (255)
T ss_dssp SEEEEEECTTCCEEEE-ETTTEEEEEE
T ss_pred CCCeeEECCCCCEEEE-cCCceEEEEE
Confidence 4588999999985554 6666666654
No 243
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=96.38 E-value=0.071 Score=43.20 Aligned_cols=56 Identities=13% Similarity=0.043 Sum_probs=40.5
Q ss_pred CCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 127 DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 127 d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
+|.|..||+.+ ++.+-.+..+ .++....+...+.+++.++.||.++.||.++++.+
T Consensus 454 ~g~l~A~D~~t-----G~~~W~~~~~-~~~~~g~~~tagglvf~gt~dg~l~a~D~~tG~~l 509 (689)
T 1yiq_A 454 SGKLIAWDPVK-----QQAAWEVPYV-TIFNGGTLSTAGNLVFEGSADGRVIAYAADTGEKL 509 (689)
T ss_dssp EEEEEEEETTT-----TEEEEEEEES-SSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred ceeEEEEECCC-----CCeEeEccCC-CCccCccceECCCEEEEECCCCcEEEEECCCCccc
Confidence 58899999987 4444443322 22333456667889999999999999999998764
No 244
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=96.38 E-value=0.24 Score=39.83 Aligned_cols=76 Identities=7% Similarity=-0.073 Sum_probs=45.3
Q ss_pred eeEEEEc--CCCeEEEEee-CCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEe-CC-----CcEEE
Q psy13207 109 IHDVAYD--YYGLRMATCS-SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG-DD-----GCVRL 179 (197)
Q Consensus 109 i~~~~~~--~~~~~~~s~~-~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~-~d-----g~i~i 179 (197)
..++++. +..+ +.|+ .+..+.+||..+.+ ...+..+..... -.+++..++|++++.|+ .+ ..+.+
T Consensus 245 ~~~~~~~~~g~ly--v~GG~~~~~v~~yd~~t~~---W~~~~~~~~~R~-~~s~~~~~dg~iyv~GG~~~~~~~~~~~e~ 318 (656)
T 1k3i_A 245 CPGISMDGNGQIV--VTGGNDAKKTSLYDSSSDS---WIPGPDMQVARG-YQSSATMSDGRVFTIGGSWSGGVFEKNGEV 318 (656)
T ss_dssp SCEEEECTTSCEE--EECSSSTTCEEEEEGGGTE---EEECCCCSSCCS-SCEEEECTTSCEEEECCCCCSSSCCCCEEE
T ss_pred cccccCCCCCCEE--EeCCCCCCceEEecCcCCc---eeECCCCCcccc-ccceEEecCCeEEEEeCcccCCcccccceE
Confidence 3345554 3333 6666 45689999987632 233333322111 13455667999999998 44 56999
Q ss_pred EEcCCCcchhhh
Q psy13207 180 WKLKKKRKKKKE 191 (197)
Q Consensus 180 w~~~~~~~~~~~ 191 (197)
||..+. .|..+
T Consensus 319 yd~~t~-~W~~~ 329 (656)
T 1k3i_A 319 YSPSSK-TWTSL 329 (656)
T ss_dssp EETTTT-EEEEE
T ss_pred eCCCCC-cceeC
Confidence 999764 45543
No 245
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=96.34 E-value=0.17 Score=36.48 Aligned_cols=141 Identities=11% Similarity=-0.016 Sum_probs=76.2
Q ss_pred ceeEEEECC-CCCCcEEEEEeC-----------------CCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCc
Q psy13207 27 SVTDVKFGP-KQLGLVLATCAA-----------------DGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSR 88 (197)
Q Consensus 27 ~v~~~~~~~-~~~~~~l~s~~~-----------------dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (197)
....+.+.| + |++.++-.. ++.|..+|..+++... + .. .......++++|+++.
T Consensus 127 ~p~~i~~d~~~--G~l~v~d~~~~~~~~~~~~~~~~~~~~g~v~~~d~~~~~~~~-~--~~---~~~~p~gia~~~dg~~ 198 (322)
T 2fp8_A 127 WLYAVTVDQRT--GIVYFTDVSTLYDDRGVQQIMDTSDKTGRLIKYDPSTKETTL-L--LK---ELHVPGGAEVSADSSF 198 (322)
T ss_dssp CEEEEEECTTT--CCEEEEESCSSCCTTCHHHHHHHTCCCEEEEEEETTTTEEEE-E--EE---EESCCCEEEECTTSSE
T ss_pred ccceEEEecCC--CEEEEECCcccccccccceehcccCCCceEEEEeCCCCEEEE-e--cc---CCccCcceEECCCCCE
Confidence 357788888 7 776665432 3667777765543211 0 11 1134567899999885
Q ss_pred ccce------eEEEEee--------EecccCCCceeEEEEcCC-CeEEEEeeC----------CCeEEEEEccCCcccce
Q psy13207 89 FNSI------SIMYEAH--------SINAEHKDLIHDVAYDYY-GLRMATCSS----------DQNIKVTRDVMGTRFDI 143 (197)
Q Consensus 89 ~~~~------~~~~~~~--------~~~~~~~~~i~~~~~~~~-~~~~~s~~~----------d~~i~~~d~~~~~~~~~ 143 (197)
+..+ +..|++. .+. .... ...+++.++ .++ ++... .+.|..+|.. +
T Consensus 199 lyv~d~~~~~I~~~~~~~~~~~~~~~~~-~~~g-P~gi~~d~~G~l~-va~~~~~~~~~~~~~~~~v~~~d~~------G 269 (322)
T 2fp8_A 199 VLVAEFLSHQIVKYWLEGPKKGTAEVLV-KIPN-PGNIKRNADGHFW-VSSSEELDGNMHGRVDPKGIKFDEF------G 269 (322)
T ss_dssp EEEEEGGGTEEEEEESSSTTTTCEEEEE-ECSS-EEEEEECTTSCEE-EEEEEETTSSTTSCEEEEEEEECTT------S
T ss_pred EEEEeCCCCeEEEEECCCCcCCccceEE-eCCC-CCCeEECCCCCEE-EEecCcccccccCCCccEEEEECCC------C
Confidence 4322 5566521 111 1112 567777722 232 44333 4567777754 3
Q ss_pred eeeeeecCc----eecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 144 ETIGNFEDH----YCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 144 ~~~~~~~~h----~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
+.+..+... ...+..+++ .++++.++...++.|..+++...
T Consensus 270 ~~~~~~~~~~g~~~~~~~~~~~-~~g~L~v~~~~~~~i~~~~~~~~ 314 (322)
T 2fp8_A 270 NILEVIPLPPPFAGEHFEQIQE-HDGLLYIGTLFHGSVGILVYDKK 314 (322)
T ss_dssp CEEEEEECCTTTTTSCCCEEEE-ETTEEEEECSSCSEEEEEEC---
T ss_pred CEEEEEECCCCCccccceEEEE-eCCEEEEeecCCCceEEEecccc
Confidence 333333221 234556666 46776666667889999998643
No 246
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=96.14 E-value=0.2 Score=35.07 Aligned_cols=147 Identities=6% Similarity=-0.101 Sum_probs=84.3
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc------eeEEEE---
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS------ISIMYE--- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~--- 97 (197)
.+.+++|+|++ +.++++-..++.|..+++...... .+. . ........+++++++..+.. .+.+++
T Consensus 37 ~~~gi~~d~~~-~~ly~~d~~~~~I~~~~~~g~~~~-~~~-~---~~~~~p~~ia~d~~~~~lyv~d~~~~~I~~~~~~g 110 (267)
T 1npe_A 37 VIIGLAFDCVD-KVVYWTDISEPSIGRASLHGGEPT-TII-R---QDLGSPEGIALDHLGRTIFWTDSQLDRIEVAKMDG 110 (267)
T ss_dssp EEEEEEEETTT-TEEEEEETTTTEEEEEESSSCCCE-EEE-C---TTCCCEEEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred cEEEEEEecCC-CEEEEEECCCCEEEEEecCCCCcE-EEE-E---CCCCCccEEEEEecCCeEEEEECCCCEEEEEEcCC
Confidence 46789999861 555666667789999998754321 110 0 11246788999987654432 255555
Q ss_pred --eeEecccCCCceeEEEEcC-CCeEEEEeeC--CCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEE-EE
Q psy13207 98 --AHSINAEHKDLIHDVAYDY-YGLRMATCSS--DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVA-SS 171 (197)
Q Consensus 98 --~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~--d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~-~~ 171 (197)
...+..........+++++ ...++++... .+.|..++..... ...+ ..........++++|++..|+ +.
T Consensus 111 ~~~~~~~~~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~~dg~~---~~~~--~~~~~~~P~gia~d~~~~~lyv~d 185 (267)
T 1npe_A 111 TQRRVLFDTGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSHMDGTN---RRIL--AQDNLGLPNGLTFDAFSSQLCWVD 185 (267)
T ss_dssp CSCEEEECSSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEETTSCC---CEEE--ECTTCSCEEEEEEETTTTEEEEEE
T ss_pred CCEEEEEECCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEecCCCC---cEEE--EECCCCCCcEEEEcCCCCEEEEEE
Confidence 1122102224567888884 3322244332 4688888875310 1111 112223568899999876554 44
Q ss_pred eCCCcEEEEEcCC
Q psy13207 172 GDDGCVRLWKLKK 184 (197)
Q Consensus 172 ~~dg~i~iw~~~~ 184 (197)
...+.|..+++..
T Consensus 186 ~~~~~I~~~~~~g 198 (267)
T 1npe_A 186 AGTHRAECLNPAQ 198 (267)
T ss_dssp TTTTEEEEEETTE
T ss_pred CCCCEEEEEecCC
Confidence 5668899999864
No 247
>3mbr_X Glutamine cyclotransferase; beta-propeller; 1.44A {Xanthomonas campestris}
Probab=96.03 E-value=0.22 Score=34.77 Aligned_cols=120 Identities=8% Similarity=0.027 Sum_probs=70.1
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE------eeEecc-cCC
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE------AHSINA-EHK 106 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~~~~~-~~~ 106 (197)
+++.+..-.++.+.++|..+.+.+.++... . ....+.+++..|..+ +.++| +..+.. .+.
T Consensus 75 ~~ly~ltw~~~~v~v~D~~tl~~~~ti~~~------~--~Gwglt~dg~~L~vSdgs~~l~~iDp~t~~~~~~I~V~~~g 146 (243)
T 3mbr_X 75 DRLIQLTWRNHEGFVYDLATLTPRARFRYP------G--EGWALTSDDSHLYMSDGTAVIRKLDPDTLQQVGSIKVTAGG 146 (243)
T ss_dssp TEEEEEESSSSEEEEEETTTTEEEEEEECS------S--CCCEEEECSSCEEEECSSSEEEEECTTTCCEEEEEECEETT
T ss_pred CEEEEEEeeCCEEEEEECCcCcEEEEEeCC------C--CceEEeeCCCEEEEECCCCeEEEEeCCCCeEEEEEEEccCC
Confidence 445556667899999999988766555432 1 122333455554333 66666 233321 111
Q ss_pred ---CceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC-------------ceecEEEEEEccCCCEEE
Q psy13207 107 ---DLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED-------------HYCTVWRVSWNITGTIVA 169 (197)
Q Consensus 107 ---~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~-------------h~~~v~~~~~~p~~~~l~ 169 (197)
..++.+.|. +..+ +....+..|.+.|.+++ +.+..+.. -..-.+.|+++|+++.|.
T Consensus 147 ~~~~~lNeLe~~~G~ly--anvw~s~~I~vIDp~tG-----~V~~~idl~~l~~~~~~~~~~~~~vlNGIA~d~~~~~lf 219 (243)
T 3mbr_X 147 RPLDNLNELEWVNGELL--ANVWLTSRIARIDPASG-----KVVAWIDLQALVPDADALTDSTNDVLNGIAFDAEHDRLF 219 (243)
T ss_dssp EECCCEEEEEEETTEEE--EEETTTTEEEEECTTTC-----BEEEEEECGGGSTTTTSCCCTTSSCEEEEEEETTTTEEE
T ss_pred cccccceeeEEeCCEEE--EEECCCCeEEEEECCCC-----CEEEEEECCcCccccccccCCcCCceEEEEEcCCCCEEE
Confidence 345667776 4433 55556789999999873 33333221 123568999999876665
Q ss_pred EEeC
Q psy13207 170 SSGD 173 (197)
Q Consensus 170 ~~~~ 173 (197)
..+.
T Consensus 220 VTGK 223 (243)
T 3mbr_X 220 VTGK 223 (243)
T ss_dssp EEET
T ss_pred EECC
Confidence 5553
No 248
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.96 E-value=0.16 Score=37.47 Aligned_cols=112 Identities=13% Similarity=0.004 Sum_probs=62.6
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccCCCce-eEEEEcCC
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLI-HDVAYDYY 117 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i-~~~~~~~~ 117 (197)
+..++.++.++.|..+|..+++.+-.+...... .. . . .....+ ..+.....
T Consensus 53 ~~~v~~~~~~g~v~a~d~~tG~~~W~~~~~~~~----~~-------~----------------~-~~~~~~~~~~~~~~~ 104 (376)
T 3q7m_A 53 DNVVYAADRAGLVKALNADDGKEIWSVSLAEKD----GW-------F----------------S-KEPALLSGGVTVSGG 104 (376)
T ss_dssp TTEEEEECTTSEEEEEETTTCCEEEEEECCC-------C-------C----------------S-CCCCCEEEEEEEETT
T ss_pred CCEEEEEcCCCeEEEEEccCCceeeeecCcccc----cc-------c----------------c-ccCcccccCceEeCC
Confidence 456777888999999999887643211110000 00 0 0 001112 22333356
Q ss_pred CeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcc
Q psy13207 118 GLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187 (197)
Q Consensus 118 ~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~ 187 (197)
.+ +.++.++.|..+|.+++ +.+-.............. .+..++.++.++.+..+|.++++.
T Consensus 105 ~v--~v~~~~g~l~a~d~~tG-----~~~W~~~~~~~~~~~p~~--~~~~v~v~~~~g~l~~~d~~tG~~ 165 (376)
T 3q7m_A 105 HV--YIGSEKAQVYALNTSDG-----TVAWQTKVAGEALSRPVV--SDGLVLIHTSNGQLQALNEADGAV 165 (376)
T ss_dssp EE--EEEETTSEEEEEETTTC-----CEEEEEECSSCCCSCCEE--ETTEEEEECTTSEEEEEETTTCCE
T ss_pred EE--EEEcCCCEEEEEECCCC-----CEEEEEeCCCceEcCCEE--ECCEEEEEcCCCeEEEEECCCCcE
Confidence 66 77888999999998763 333222211111111112 245777888899999999988764
No 249
>2fp8_A Strictosidine synthase; six bladed beta propeller fold, lyase; 2.30A {Rauvolfia serpentina} PDB: 2fp9_A* 2fpc_A* 2vaq_A* 3v1s_A* 2fpb_A* 2v91_A*
Probab=95.86 E-value=0.31 Score=35.11 Aligned_cols=146 Identities=9% Similarity=-0.035 Sum_probs=79.3
Q ss_pred ceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc--CCCeeeEEEcc-CCCcccc-----------
Q psy13207 27 SVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC--PTLASCLTWNH-SFSRFNS----------- 91 (197)
Q Consensus 27 ~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~-~~~~~~~----------- 91 (197)
.+.++++.+ + ++++++ ...+.+..+|..++.. ..+. ..... ......+++.+ +++.+++
T Consensus 81 ~p~gi~~~~~~--g~l~v~-d~~~~i~~~d~~~g~~-~~~~--~~~~~~~~~~p~~i~~d~~~G~l~v~d~~~~~~~~~~ 154 (322)
T 2fp8_A 81 RTYDISYNLQN--NQLYIV-DCYYHLSVVGSEGGHA-TQLA--TSVDGVPFKWLYAVTVDQRTGIVYFTDVSTLYDDRGV 154 (322)
T ss_dssp CEEEEEEETTT--TEEEEE-ETTTEEEEECTTCEEC-EEEE--SEETTEECSCEEEEEECTTTCCEEEEESCSSCCTTCH
T ss_pred CCceEEEcCCC--CcEEEE-ECCCCEEEEeCCCCEE-EEec--ccCCCCcccccceEEEecCCCEEEEECCccccccccc
Confidence 467899987 5 655544 4445577888665421 1111 11111 23467788888 8865542
Q ss_pred -----------eeEEEE-----eeEecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEccCCcccceeeeeeecCcee
Q psy13207 92 -----------ISIMYE-----AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC 154 (197)
Q Consensus 92 -----------~~~~~~-----~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~ 154 (197)
.+..|+ +..+. ......+.|+++++. .++++-...+.|.+|++........+....+. .
T Consensus 155 ~~~~~~~~~~g~v~~~d~~~~~~~~~~-~~~~~p~gia~~~dg~~lyv~d~~~~~I~~~~~~~~~~~~~~~~~~~~---g 230 (322)
T 2fp8_A 155 QQIMDTSDKTGRLIKYDPSTKETTLLL-KELHVPGGAEVSADSSFVLVAEFLSHQIVKYWLEGPKKGTAEVLVKIP---N 230 (322)
T ss_dssp HHHHHHTCCCEEEEEEETTTTEEEEEE-EEESCCCEEEECTTSSEEEEEEGGGTEEEEEESSSTTTTCEEEEEECS---S
T ss_pred ceehcccCCCceEEEEeCCCCEEEEec-cCCccCcceEECCCCCEEEEEeCCCCeEEEEECCCCcCCccceEEeCC---C
Confidence 144444 11111 112345678888442 22244456789999998642111112222222 2
Q ss_pred cEEEEEEccCCCEEEEEeC----------CCcEEEEEcC
Q psy13207 155 TVWRVSWNITGTIVASSGD----------DGCVRLWKLK 183 (197)
Q Consensus 155 ~v~~~~~~p~~~~l~~~~~----------dg~i~iw~~~ 183 (197)
...+++.++|++.++... .+.|..+|..
T Consensus 231 -P~gi~~d~~G~l~va~~~~~~~~~~~~~~~~v~~~d~~ 268 (322)
T 2fp8_A 231 -PGNIKRNADGHFWVSSSEELDGNMHGRVDPKGIKFDEF 268 (322)
T ss_dssp -EEEEEECTTSCEEEEEEEETTSSTTSCEEEEEEEECTT
T ss_pred -CCCeEECCCCCEEEEecCcccccccCCCccEEEEECCC
Confidence 577899999987776644 3567777653
No 250
>3q7m_A Lipoprotein YFGL, BAMB; beta-propeller, BAM complex, outer membrane protein folding, negative, BAMA, protein binding; 1.65A {Escherichia coli} PDB: 3q7n_A 3q7o_A 3p1l_A 3prw_A 2yh3_A 3q54_A
Probab=95.71 E-value=0.069 Score=39.44 Aligned_cols=126 Identities=8% Similarity=-0.082 Sum_probs=65.7
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc----eeEEEE------eeEecccCCCc
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS----ISIMYE------AHSINAEHKDL 108 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~------~~~~~~~~~~~ 108 (197)
+..+..++.++.+..+|..+++.+-...... ...+... ++..++. .+..+| +-.........
T Consensus 239 ~~~v~~~~~~g~l~~~d~~tG~~~w~~~~~~-------~~~~~~~-~~~l~~~~~~g~l~~~d~~tG~~~w~~~~~~~~~ 310 (376)
T 3q7m_A 239 NGVVFALAYNGNLTALDLRSGQIMWKRELGS-------VNDFIVD-GNRIYLVDQNDRVMALTIDGGVTLWTQSDLLHRL 310 (376)
T ss_dssp TTEEEEECTTSCEEEEETTTCCEEEEECCCC-------EEEEEEE-TTEEEEEETTCCEEEEETTTCCEEEEECTTTTSC
T ss_pred CCEEEEEecCcEEEEEECCCCcEEeeccCCC-------CCCceEE-CCEEEEEcCCCeEEEEECCCCcEEEeecccCCCc
Confidence 4567777889999999998887653332111 1112211 1111111 133333 00111011122
Q ss_pred eeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEE-EEEccCCCEEEEEeCCCcEEEEE
Q psy13207 109 IHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWR-VSWNITGTIVASSGDDGCVRLWK 181 (197)
Q Consensus 109 i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~-~~~~p~~~~l~~~~~dg~i~iw~ 181 (197)
+......+..+ +.++.+|.+.++|.++ ++.+.........+.. ... .+..|+.++.+|.|..|+
T Consensus 311 ~~~~~~~~~~l--~v~~~~g~l~~~d~~t-----G~~~~~~~~~~~~~~~~~~~--~~~~l~v~~~~G~l~~~~ 375 (376)
T 3q7m_A 311 LTSPVLYNGNL--VVGDSEGYLHWINVED-----GRFVAQQKVDSSGFQTEPVA--ADGKLLIQAKDGTVYSIT 375 (376)
T ss_dssp CCCCEEETTEE--EEECTTSEEEEEETTT-----CCEEEEEECCTTCBCSCCEE--ETTEEEEEBTTSCEEEEE
T ss_pred ccCCEEECCEE--EEEeCCCeEEEEECCC-----CcEEEEEecCCCcceeCCEE--ECCEEEEEeCCCEEEEEe
Confidence 22333345666 7888899999999877 4444333321122211 111 245788888999999987
No 251
>1fwx_A Nitrous oxide reductase; beta-propeller domain, cupredoxin domain, CUZ site, CUA site oxidoreductase; 1.60A {Paracoccus denitrificans} SCOP: b.6.1.4 b.69.3.1 PDB: 2iwk_A 2iwf_A
Probab=95.66 E-value=0.62 Score=37.01 Aligned_cols=150 Identities=8% Similarity=-0.046 Sum_probs=87.7
Q ss_pred cceeEEEE-C-CCCCCcEEEEEe------------------CCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccC
Q psy13207 26 TSVTDVKF-G-PKQLGLVLATCA------------------ADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHS 85 (197)
Q Consensus 26 ~~v~~~~~-~-~~~~~~~l~s~~------------------~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 85 (197)
.....+++ . |+ +.+++.++ .++.+.+.|..+.+...++.. ......++.+|+
T Consensus 134 ~~phg~~~~~~p~--~~~v~~~~~~~~p~~~dg~~l~~~~~~~~~vtvID~~t~~v~~qI~V------gg~pd~~~~spd 205 (595)
T 1fwx_A 134 KGIHGLRPQKWPR--SNYVFCNGEDETPLVNDGTNMEDVANYVNVFTAVDADKWEVAWQVLV------SGNLDNCDADYE 205 (595)
T ss_dssp CSEEEEEECCSSB--CSEEEEEECSCEESSCSSSSTTCGGGEEEEEEEEETTTTEEEEEEEE------SSCCCCEEECSS
T ss_pred CCCcceeeeecCC--CcEEEEecccccccCCCCcccccccccCceEEEEECCCCeEEEEEEe------CCCccceEECCC
Confidence 34678887 4 87 77777774 346788888887654433222 124466777888
Q ss_pred CCcccce--------------------eEEEE------------------eeEecccC------------CCceeEEEEc
Q psy13207 86 FSRFNSI--------------------SIMYE------------------AHSINAEH------------KDLIHDVAYD 115 (197)
Q Consensus 86 ~~~~~~~--------------------~~~~~------------------~~~~~~~~------------~~~i~~~~~~ 115 (197)
+++++.+ +.+.+ +..+.... .....++.++
T Consensus 206 Gk~~~vt~~~se~~~~i~~~~~~~~d~v~V~~~~~~~~~v~~Gk~~~i~~V~VID~~~~~~~~~~~~Ipvg~~PhGv~~s 285 (595)
T 1fwx_A 206 GKWAFSTSYNSEKGMTLPEMTAAEMDHIVVFNIAEIEKAIAAGDYQELNGVKVVDGRKEASSLFTRYIPIANNPHGCNMA 285 (595)
T ss_dssp SSEEEEEESCTTCCSSHHHHTCCSEEEEEEEEHHHHHHHHHHTCSEEETTEEEEECSGGGCCSSEEEEEEESSCCCEEEC
T ss_pred CCEEEEEecCcccCcchhhccccccceEEEeeccceeEeccCCCeeEECcEEEEeCcccCCceeEEEEecCCCceEEEEc
Confidence 7775332 23333 22222011 1223457777
Q ss_pred CCCe-EEEEeeCCCeEEEEEccCCcc-------cceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCC
Q psy13207 116 YYGL-RMATCSSDQNIKVTRDVMGTR-------FDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 116 ~~~~-~~~s~~~d~~i~~~d~~~~~~-------~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~ 184 (197)
|+.- .++++..+..|.++|+.+... ........... ......++|+|+|....+.-.|+.|..||+.+
T Consensus 286 PDGk~v~V~~~~s~~VsVid~~~~~~~~~~~l~~~~~v~~~v~v-G~gP~h~aF~~dG~aY~t~~ldsqV~kwdi~~ 361 (595)
T 1fwx_A 286 PDKKHLCVAGKLSPTVTVLDVTRFDAVFYENADPRSAVVAEPEL-GLGPLHTAFDGRGNAYTSLFLDSQVVKWNIED 361 (595)
T ss_dssp TTSSEEEEECTTSSBEEEEEGGGHHHHHHSCCCGGGGEEECCBC-CSCEEEEEECTTSEEEEEETTTTEEEEEEHHH
T ss_pred CCCCEEEEeCCCCCeEEEEECcccccccccccCcccceEEEcCC-CCCcceEEECCCCeEEEEEecCCcEEEEEhhH
Confidence 4443 335566789999999975210 00112233322 23568899999994444555899999999876
No 252
>2xe4_A Oligopeptidase B; hydrolase-inhibitor complex, hydrolase, protease inhibitor trypanosomes, CLAN SC; HET: FC0 RGL; 1.65A {Leishmania major}
Probab=95.59 E-value=0.77 Score=37.59 Aligned_cols=143 Identities=13% Similarity=0.143 Sum_probs=73.0
Q ss_pred eEEEECCCCCCcEEEEEeCC-----CcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce--------eEE
Q psy13207 29 TDVKFGPKQLGLVLATCAAD-----GLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--------SIM 95 (197)
Q Consensus 29 ~~~~~~~~~~~~~l~s~~~d-----g~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--------~~~ 95 (197)
..+.|+|+ |+.|+....| ..|..+++.++....... ..-........+.|+|++++|+.. +.+
T Consensus 224 ~~~~WspD--g~~l~y~~~d~~~~~~~v~~~~lgt~~~~~~lv--~~~~~~~~~~~~~~SpDg~~l~~~~~~~~~~~l~~ 299 (751)
T 2xe4_A 224 GEIVWGPD--HTSLFYVTKDETLRENKVWRHVMGKLQSEDVCL--YEEHNPLFSAFMYKAADTNTLCIGSQSPETAEVHL 299 (751)
T ss_dssp SCCEECSS--TTEEEEEEECTTCCEEEEEEEETTSCGGGCEEE--EECCCTTCEEEEEECTTSSEEEEEEECSSCEEEEE
T ss_pred eeEEEecC--CCEEEEEEECCCCCCCEEEEEECCCCchhcEEE--EecCCCceEEEEEECCCCCEEEEEecCCCCceEEE
Confidence 46899999 8777766655 257777876653211111 000112345678999999987543 455
Q ss_pred EEe---------eEecccCCCceeEEEEc-CCCeEEEEeeCC----CeEEEEEccCCcccceeeeeeecCce--ecEEEE
Q psy13207 96 YEA---------HSINAEHKDLIHDVAYD-YYGLRMATCSSD----QNIKVTRDVMGTRFDIETIGNFEDHY--CTVWRV 159 (197)
Q Consensus 96 ~~~---------~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d----~~i~~~d~~~~~~~~~~~~~~~~~h~--~~v~~~ 159 (197)
+++ ..+..........+.|+ ++.+++++ ..+ ..|..+++.+... ...+ +..+. ..+..+
T Consensus 300 ~d~~~~~~~~~~~~l~~~~~~~~~s~~~~~g~~l~~~t-~~~~a~~~~L~~~d~~~~~~--~~~~--li~~~~~~~l~~~ 374 (751)
T 2xe4_A 300 LDLRKGNAHNTLEIVRPREKGVRYDVQMHGTSHLVILT-NEGGAVNHKLLIAPRGQPSD--WSHV--LVDHSEDVFMESI 374 (751)
T ss_dssp EESSSCTTCCCEEESSCCCTTCCEEEEEETTTEEEEEE-CTTTCTTCEEEEEETTSTTC--CCCE--EECCCSSEEEEEE
T ss_pred EECCCCCCCceeEEeecCCCCceEEEeeeeCCEEEEEe-CCCCCCCcEEEEEcCCCccc--ceee--EECCCCCcEEEEE
Confidence 552 22221233445566655 55553333 332 3555566543100 1110 11222 244555
Q ss_pred EEccCCCEEEEEeCCCcEEEEE
Q psy13207 160 SWNITGTIVASSGDDGCVRLWK 181 (197)
Q Consensus 160 ~~~p~~~~l~~~~~dg~i~iw~ 181 (197)
.+. .+.++++...++...+|-
T Consensus 375 ~~~-~~~lv~~~~~~g~~~l~~ 395 (751)
T 2xe4_A 375 AVR-SNYLVVAGRRAGLTRIWT 395 (751)
T ss_dssp EEC-SSEEEEEEEETTEEEEEE
T ss_pred EEE-CCEEEEEEEeCCEEEEEE
Confidence 554 344556666777655543
No 253
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=95.58 E-value=0.54 Score=35.79 Aligned_cols=146 Identities=11% Similarity=0.017 Sum_probs=78.1
Q ss_pred cceeEEEECCC-CCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCccccee-------EEEE
Q psy13207 26 TSVTDVKFGPK-QLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSIS-------IMYE 97 (197)
Q Consensus 26 ~~v~~~~~~~~-~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~ 97 (197)
.....++|+|+ ..+.++++ ...+.|+.++..++...... ........++++++++.+++.. .++.
T Consensus 139 ~~P~gvavd~~s~~g~Lyv~-D~~~~I~~id~~~g~v~~~~------~~~~~P~giavd~dG~lyVad~~~~~~~~gv~~ 211 (433)
T 4hw6_A 139 DNIWRMMFDPNSNYDDLYWV-GQRDAFRHVDFVNQYVDIKT------TNIGQCADVNFTLNGDMVVVDDQSSDTNTGIYL 211 (433)
T ss_dssp SCCCEEEECTTTTTCEEEEE-CBTSCEEEEETTTTEEEEEC------CCCSCEEEEEECTTCCEEEEECCSCTTSEEEEE
T ss_pred CCCceEEEccccCCCEEEEE-eCCCCEEEEECCCCEEEEee------cCCCCccEEEECCCCCEEEEcCCCCcccceEEE
Confidence 34668899983 11554444 43388999998665422111 1234578999999998543321 1111
Q ss_pred e---------eEecccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCE
Q psy13207 98 A---------HSINAEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTI 167 (197)
Q Consensus 98 ~---------~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~ 167 (197)
+ ..+ ........+++++ +..++++-..++.|+.+|..+... ...+..... ...-..++|+|+|++
T Consensus 212 ~~~~~~~~~~~~~--~~~~~P~giavd~~~G~lyv~d~~~~~V~~~d~~~g~~--~~~~~~~~~-~~~~~~ia~dpdG~~ 286 (433)
T 4hw6_A 212 FTRASGFTERLSL--CNARGAKTCAVHPQNGKIYYTRYHHAMISSYDPATGTL--TEEEVMMDT-KGSNFHIVWHPTGDW 286 (433)
T ss_dssp ECGGGTTCCEEEE--EECSSBCCCEECTTTCCEEECBTTCSEEEEECTTTCCE--EEEEEECSC-CSSCEEEEECTTSSE
T ss_pred EECCCCeeccccc--cccCCCCEEEEeCCCCeEEEEECCCCEEEEEECCCCeE--EEEEeccCC-CCCcccEEEeCCCCE
Confidence 0 001 0112234455553 332224555667888888754211 011111111 122356999999985
Q ss_pred E-EEEeCCCcEEEEEcC
Q psy13207 168 V-ASSGDDGCVRLWKLK 183 (197)
Q Consensus 168 l-~~~~~dg~i~iw~~~ 183 (197)
| ++-...+.|+.+++.
T Consensus 287 LYvad~~~~~I~~~~~d 303 (433)
T 4hw6_A 287 AYIIYNGKHCIYRVDYN 303 (433)
T ss_dssp EEEEETTTTEEEEEEBC
T ss_pred EEEEeCCCCEEEEEeCC
Confidence 4 445567889998875
No 254
>3nok_A Glutaminyl cyclase; beta-propeller, cyclotransferase, pyrogl transferase; HET: MES DDQ; 1.65A {Myxococcus xanthus}
Probab=95.58 E-value=0.16 Score=36.05 Aligned_cols=124 Identities=8% Similarity=-0.023 Sum_probs=69.7
Q ss_pred EEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-----eEEEE------ee
Q psy13207 31 VKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-----SIMYE------AH 99 (197)
Q Consensus 31 ~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-----~~~~~------~~ 99 (197)
+.+.. +++.+..-.++.+.++|..+.+.+.++.....- ..++ +++..|..+ +.++| +.
T Consensus 101 it~~g---~~Ly~ltw~~~~v~V~D~~Tl~~~~ti~~~~eG------wGLt--~Dg~~L~vSdGs~~l~~iDp~T~~v~~ 169 (268)
T 3nok_A 101 LASDG---ERLYQLTWTEGLLFTWSGMPPQRERTTRYSGEG------WGLC--YWNGKLVRSDGGTMLTFHEPDGFALVG 169 (268)
T ss_dssp EEECS---SCEEEEESSSCEEEEEETTTTEEEEEEECSSCC------CCEE--EETTEEEEECSSSEEEEECTTTCCEEE
T ss_pred EEEeC---CEEEEEEccCCEEEEEECCcCcEEEEEeCCCce------eEEe--cCCCEEEEECCCCEEEEEcCCCCeEEE
Confidence 55543 345555668899999999998887777644331 1111 223332211 44555 22
Q ss_pred Eecc-cCC---CceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecC-------------ceecEEEEEE
Q psy13207 100 SINA-EHK---DLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED-------------HYCTVWRVSW 161 (197)
Q Consensus 100 ~~~~-~~~---~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~-------------h~~~v~~~~~ 161 (197)
.+.. .+. ..++.+.|. +..+ +....++.|.+.|.++ ++.+..+.- -..-.+.|++
T Consensus 170 ~I~V~~~g~~v~~lNeLe~~dG~ly--anvw~s~~I~vIDp~T-----G~V~~~Idl~~L~~~~~~~~~~~~~vlNGIA~ 242 (268)
T 3nok_A 170 AVQVKLRGQPVELINELECANGVIY--ANIWHSSDVLEIDPAT-----GTVVGVIDASALTRAVAGQVTNPEAVLNGIAV 242 (268)
T ss_dssp EEECEETTEECCCEEEEEEETTEEE--EEETTCSEEEEECTTT-----CBEEEEEECHHHHHHHTTTCCCTTCCEEEEEE
T ss_pred EEEeCCCCcccccccccEEeCCEEE--EEECCCCeEEEEeCCC-----CcEEEEEECCCCcccccccccCcCCceEEEEE
Confidence 2220 111 245677777 5433 6666788999999987 343333321 1135689999
Q ss_pred ccCCCEEEEEe
Q psy13207 162 NITGTIVASSG 172 (197)
Q Consensus 162 ~p~~~~l~~~~ 172 (197)
+|+++.|+..+
T Consensus 243 dp~~~rlfVTG 253 (268)
T 3nok_A 243 EPGSGRIFMTG 253 (268)
T ss_dssp CTTTCCEEEEE
T ss_pred cCCCCEEEEeC
Confidence 99765454444
No 255
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=95.55 E-value=0.56 Score=35.74 Aligned_cols=135 Identities=9% Similarity=0.045 Sum_probs=78.5
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEecccCC
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHK 106 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 106 (197)
.|..+..+|+ |++||..+. ..|.|-.+..+..... .... ...+.+-.|. +........
T Consensus 67 ~i~qlvlSps--G~lLAl~g~-~~V~Vv~LP~~~~~~~---~~~~--~~~~q~~ty~--------------l~~~~~~~~ 124 (452)
T 3pbp_A 67 DTFHVISSTS--GDLLCLFND-NEIFVMEVPWGYSNVE---DVSI--QDAFQIFHYS--------------IDEEEVGPK 124 (452)
T ss_dssp TTCEEEECTT--SSEEEEECS-SEEEEEECCTTCSCCC---CHHH--HHTTEEEEEE--------------GGGCC--CC
T ss_pred ceeEEEECCC--CCEEEEecC-CeEEEEEecCccccCc---cccc--ccccceeEEE--------------cCCcccCCC
Confidence 4677999998 999888764 5888888874321110 0000 0011111111 111110235
Q ss_pred CceeEEEEc-----CCCeEEEEeeCCCeEEEEEccCCcccceeee------eeecCceecEEEEEEccCCCEEEEEe--C
Q psy13207 107 DLIHDVAYD-----YYGLRMATCSSDQNIKVTRDVMGTRFDIETI------GNFEDHYCTVWRVSWNITGTIVASSG--D 173 (197)
Q Consensus 107 ~~i~~~~~~-----~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~------~~~~~h~~~v~~~~~~p~~~~l~~~~--~ 173 (197)
..|..+.|| +..+ ++-..|+.|++||+...... ...+ ..+......|.+++|.+++-.|...+ .
T Consensus 125 s~I~qVlWHPl~~~ds~L--VVLtsD~~Ir~yDl~~s~~~-P~~L~k~~~~fg~d~~~~ev~S~~Fg~~~lTLYvl~~t~ 201 (452)
T 3pbp_A 125 SSIKKVLFHPKSYRDSCI--VVLKEDDTITMFDILNSQEK-PIVLNKPNNSFGLDARVNDITDLEFSKDGLTLYCLNTTE 201 (452)
T ss_dssp CCEEEEEECTTBGGGCEE--EEEETTSCEEEEETTCTTSC-CEEESCCCSEEESCSSCCCEEEEEECTTSSCEEEEECTT
T ss_pred CceeEEEeccccCCCCeE--EEEecCCEEEEEEcccCCCC-CcchhccccccCCCcccceEEEEEEcCCCcEEEEEecCC
Confidence 778888898 3456 89999999999999752111 1111 12222336788999999887666644 7
Q ss_pred CCcEEEEEcCCCc
Q psy13207 174 DGCVRLWKLKKKR 186 (197)
Q Consensus 174 dg~i~iw~~~~~~ 186 (197)
+|-|+-.-.-.+.
T Consensus 202 ~GDIYAlcP~LP~ 214 (452)
T 3pbp_A 202 GGDIFAFYPFLPS 214 (452)
T ss_dssp SCEEEEESSCCCS
T ss_pred CCCEEEECCCCcc
Confidence 7888776544333
No 256
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=95.42 E-value=0.9 Score=37.30 Aligned_cols=151 Identities=7% Similarity=-0.001 Sum_probs=90.7
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccc---eeccCCCeeeEEEccCCCcccc----eeEEEE-
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQH---EVACPTLASCLTWNHSFSRFNS----ISIMYE- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~~~----~~~~~~- 97 (197)
..|.++...++ |.+.+ |+.+ -|.+++..+.... .+.... .......|.++...+++...+. ++..|+
T Consensus 263 ~~i~~i~~d~~--g~lWi-gt~~-Gl~~~~~~~~~~~-~~~~~~~~~~~l~~~~i~~i~~D~~g~lWigt~~~Gl~~~~~ 337 (795)
T 4a2l_A 263 NYIRSLAMDSQ--NRLWI-GTFN-DLNIYHEGTDSFA-SYSSNPVENGSLSQRSVRSIFMDSQGGMWLGTYFGGLNYYHP 337 (795)
T ss_dssp SBEEEEEECTT--SCEEE-EESS-CEEEEETTTTEEE-EECCCTTSTTSCSSSCEEEEEECTTSCEEEEESSSCEEEECG
T ss_pred CeEEEEEEcCC--CCEEE-EeCC-hhheEcCCCCeEE-EEecCCCCCCCCCCCcEEEEEEeCCcCEEEEECCCCeEEeCC
Confidence 56889988887 76544 4444 5788887655321 111000 0011467899999998876543 466666
Q ss_pred ----eeEecc------cCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeee------cCceecEEEEE
Q psy13207 98 ----AHSINA------EHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF------EDHYCTVWRVS 160 (197)
Q Consensus 98 ----~~~~~~------~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~------~~h~~~v~~~~ 160 (197)
...+.. .....|.++... ...+ ..|+.++-|..|+..+... .....- .-....|.++.
T Consensus 338 ~~~~~~~~~~~~~~~~l~~~~V~~i~~d~~g~l--WiGt~~~Gl~~~~~~~~~~---~~~~~~~~~~~~~l~~~~v~~i~ 412 (795)
T 4a2l_A 338 IRNRFKNIRNIPYKNSLSDNVVSCIVEDKDKNL--WIGTNDGGLNLYNPITQRF---TSYTLQEDESARGIGSNNIKAVY 412 (795)
T ss_dssp GGGSSEEECCCTTSSSCSCSSEEEEEECTTSCE--EEEESSSCEEEECTTTCCE---EEECCC------CCSCSCEEEEE
T ss_pred CcccceEEcCCCCCCCCCCCeeEEEEECCCCCE--EEEECCCCeEEEcCCCCcE---EEEecCCCCcccCCCCccEEEEE
Confidence 222220 123458888887 4455 5677787788898765211 111000 01135689999
Q ss_pred EccCCCEEEEEeCCCcEEEEEcCCCc
Q psy13207 161 WNITGTIVASSGDDGCVRLWKLKKKR 186 (197)
Q Consensus 161 ~~p~~~~l~~~~~dg~i~iw~~~~~~ 186 (197)
..++|+.|..|+.++-+..+|.++++
T Consensus 413 ~d~~g~~lWigt~~~Gl~~~d~~~~~ 438 (795)
T 4a2l_A 413 VDEKKSLVYIGTHAGGLSILHRNSGQ 438 (795)
T ss_dssp EETTTTEEEEEETTTEEEEEETTTCC
T ss_pred EcCCCCEEEEEeCcCceeEEeCCCCc
Confidence 98888856667777779999987643
No 257
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=95.35 E-value=0.47 Score=34.79 Aligned_cols=31 Identities=6% Similarity=0.148 Sum_probs=26.1
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 155 TVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 155 ~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
..+.++++|+|+.|+....+|.+..+|+++.
T Consensus 186 G~nGIv~~pdg~~Liv~~~~g~L~~fD~~~p 216 (334)
T 2p9w_A 186 GYSGITFDPHSNKLIAFGGPRALTAFDVSKP 216 (334)
T ss_dssp SCSEEEEETTTTEEEEESSSSSEEEEECSSS
T ss_pred CcceEEEeCCCCEEEEEcCCCeEEEEcCCCC
Confidence 3578999999998888767999999998854
No 258
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=95.32 E-value=0.75 Score=35.77 Aligned_cols=154 Identities=6% Similarity=0.018 Sum_probs=81.4
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEE-------ccCCCcccce-------
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTW-------NHSFSRFNSI------- 92 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~~~~~------- 92 (197)
....|+|.|.+.++++++....+.|++.|+........... .. ........++| +++++++..+
T Consensus 140 ~p~~la~dp~~~~~Lyv~~~~~~~i~~ID~~~~~v~~l~~~-~~-~~~~~p~~ia~~~~~~~~d~~G~~lyvad~~~~~~ 217 (496)
T 3kya_A 140 DNGRLAFDPLNKDHLYICYDGHKAIQLIDLKNRMLSSPLNI-NT-IPTNRIRSIAFNKKIEGYADEAEYMIVAIDYDGKG 217 (496)
T ss_dssp SEEEEEEETTEEEEEEEEEETEEEEEEEETTTTEEEEEECC-TT-SSCSBEEEEEECCCBTTTBCTTCEEEEEECCCTTG
T ss_pred CCCEEEEccCCCCEEEEEECCCCeEEEEECCCCEEEEEEcc-Cc-cccCCCcEEEEeecccccCCCCCEEEEEeCCCCCc
Confidence 35688999821145555555556788888876543211110 00 01235788999 9998854322
Q ss_pred -----eEEEEee---Eecc-------cCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEcc-------CCcccc-------
Q psy13207 93 -----SIMYEAH---SINA-------EHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDV-------MGTRFD------- 142 (197)
Q Consensus 93 -----~~~~~~~---~~~~-------~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~-------~~~~~~------- 142 (197)
+.+++.. .+.. .-......++.++ +..++++-..++.|..+|+. +...+.
T Consensus 218 ~~~~~V~~i~r~~~G~~~~~~~~~~v~~~~~p~giavdp~~g~LYvtd~~~g~V~r~d~~~~~~~~~tg~~~tp~~~~~~ 297 (496)
T 3kya_A 218 DESPSVYIIKRNADGTFDDRSDIQLIAAYKQCNGATIHPINGELYFNSYEKGQVFRLDLVDYFKTIKNGGSWDPIVKNNP 297 (496)
T ss_dssp GGEEEEEEEECCTTSCCSTTSCEEEEEEESCCCCEEECTTTCCEEEEETTTTEEEEECHHHHHHHHHTTCCCCCBGGGCT
T ss_pred ccCceEEEEecCCCCceeecccceeeccCCCceEEEEcCCCCeEEEEECCCCEEEEEecccccccccCceeecccccccc
Confidence 2233200 0100 0011234555663 33333666677889999986 322100
Q ss_pred --eeeeeeecCceecEEEEEEccCCCEE-EEEeCCCcEEEEEcC
Q psy13207 143 --IETIGNFEDHYCTVWRVSWNITGTIV-ASSGDDGCVRLWKLK 183 (197)
Q Consensus 143 --~~~~~~~~~h~~~v~~~~~~p~~~~l-~~~~~dg~i~iw~~~ 183 (197)
.+.+.... .......++|+|+|++| ++-+....|+.+++.
T Consensus 298 g~~~~l~~~~-~~~~p~~ia~~p~G~~lYvaD~~~h~I~kid~d 340 (496)
T 3kya_A 298 NTFKQLFTIA-DPSWEFQIFIHPTGKYAYFGVINNHYFMRSDYD 340 (496)
T ss_dssp TTEEEEEECS-SSSCCEEEEECTTSSEEEEEETTTTEEEEEEEE
T ss_pred cccceeEecC-CCCCceEEEEcCCCCEEEEEeCCCCEEEEEecC
Confidence 01122221 23345789999999954 444567788887654
No 259
>1npe_A Nidogen, entactin; glycoprotein, basement membrane, beta-propeller, EGF-like, structural protein; 2.30A {Mus musculus} SCOP: b.68.5.1
Probab=95.32 E-value=0.45 Score=33.21 Aligned_cols=153 Identities=5% Similarity=-0.068 Sum_probs=84.5
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcc-cc-------eeEEEE
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRF-NS-------ISIMYE 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~-------~~~~~~ 97 (197)
.....+++.|++ +.++++-...+.|.++++..... ..+. . ........++++|++..+ .+ .+..++
T Consensus 79 ~~p~~ia~d~~~-~~lyv~d~~~~~I~~~~~~g~~~-~~~~-~---~~~~~P~~i~vd~~~g~lyv~~~~~~~~~I~~~~ 152 (267)
T 1npe_A 79 GSPEGIALDHLG-RTIFWTDSQLDRIEVAKMDGTQR-RVLF-D---TGLVNPRGIVTDPVRGNLYWTDWNRDNPKIETSH 152 (267)
T ss_dssp CCEEEEEEETTT-TEEEEEETTTTEEEEEETTSCSC-EEEE-C---SSCSSEEEEEEETTTTEEEEEECCSSSCEEEEEE
T ss_pred CCccEEEEEecC-CeEEEEECCCCEEEEEEcCCCCE-EEEE-E---CCCCCccEEEEeeCCCEEEEEECCCCCcEEEEEe
Confidence 456788998861 45556666678999998864321 1110 0 012456788999865443 22 133343
Q ss_pred -----eeEecccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEE
Q psy13207 98 -----AHSINAEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASS 171 (197)
Q Consensus 98 -----~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~ 171 (197)
...+..........+++++ ...++++-...+.|.++|... ......... ......++.. .+.++++.
T Consensus 153 ~dg~~~~~~~~~~~~~P~gia~d~~~~~lyv~d~~~~~I~~~~~~g-----~~~~~~~~~-~~~P~gi~~d-~~~lyva~ 225 (267)
T 1npe_A 153 MDGTNRRILAQDNLGLPNGLTFDAFSSQLCWVDAGTHRAECLNPAQ-----PGRRKVLEG-LQYPFAVTSY-GKNLYYTD 225 (267)
T ss_dssp TTSCCCEEEECTTCSCEEEEEEETTTTEEEEEETTTTEEEEEETTE-----EEEEEEEEC-CCSEEEEEEE-TTEEEEEE
T ss_pred cCCCCcEEEEECCCCCCcEEEEcCCCCEEEEEECCCCEEEEEecCC-----CceEEEecC-CCCceEEEEe-CCEEEEEE
Confidence 1222102234567888884 233335666678999999864 111111222 1223456654 34444444
Q ss_pred eCCCcEEEEEcCCCcchhhh
Q psy13207 172 GDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 172 ~~dg~i~iw~~~~~~~~~~~ 191 (197)
...+.|..+|..+++....+
T Consensus 226 ~~~~~v~~~d~~~g~~~~~i 245 (267)
T 1npe_A 226 WKTNSVIAMDLAISKEMDTF 245 (267)
T ss_dssp TTTTEEEEEETTTTEEEEEE
T ss_pred CCCCeEEEEeCCCCCceEEE
Confidence 46689999999877655444
No 260
>1kb0_A Quinohemoprotein alcohol dehydrogenase; beta-propeller fold, cytochrome C, oxidoreductase; HET: TRO HEC PQQ; 1.44A {Comamonas testosteroni} SCOP: a.3.1.6 b.70.1.1
Probab=94.97 E-value=0.16 Score=41.01 Aligned_cols=61 Identities=10% Similarity=-0.007 Sum_probs=39.2
Q ss_pred CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCce-ecEEEEEEccCCCEEEEE-eC----------------CCcE
Q psy13207 116 YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHY-CTVWRVSWNITGTIVASS-GD----------------DGCV 177 (197)
Q Consensus 116 ~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~-~~v~~~~~~p~~~~l~~~-~~----------------dg~i 177 (197)
+..+ +.++.|+.+++||.++ ++.+..+.... ..-.-+.|.++|+.++.. +. .+.+
T Consensus 488 g~~v--~~g~~dg~l~a~D~~t-----G~~lw~~~~~~~~~~~p~~y~~~G~~~v~~~~G~~~~~~~~~~~~~~~~~~~l 560 (677)
T 1kb0_A 488 GNVV--FQGTADGRLVAYHAAT-----GEKLWEAPTGTGVVAAPSTYMVDGRQYVSVAVGWGGVYGLAARATERQGPGTV 560 (677)
T ss_dssp TTEE--EEECTTSEEEEEETTT-----CCEEEEEECSSCCCSCCEEEEETTEEEEEEEECCCHHHHHHCCSCSCCCCCEE
T ss_pred CCEE--EEECCCCcEEEEECCC-----CceeeeeeCCCCcccCCEEEEeCCEEEEEEeccCCccccccccccccCCCCeE
Confidence 5555 6788999999999987 56666554322 222335566788644432 22 3678
Q ss_pred EEEEcC
Q psy13207 178 RLWKLK 183 (197)
Q Consensus 178 ~iw~~~ 183 (197)
..|.+.
T Consensus 561 ~~f~l~ 566 (677)
T 1kb0_A 561 YTFVVG 566 (677)
T ss_dssp EEEEET
T ss_pred EEEecc
Confidence 888876
No 261
>1yiq_A Quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM; 2.20A {Pseudomonas putida}
Probab=94.33 E-value=0.21 Score=40.54 Aligned_cols=47 Identities=11% Similarity=-0.053 Sum_probs=31.4
Q ss_pred CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCcee-cEEEEEEccCCCEEE
Q psy13207 116 YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC-TVWRVSWNITGTIVA 169 (197)
Q Consensus 116 ~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~l~ 169 (197)
+..+ +.++.|+.++.||.++ ++.+-.+..... .-.-+.|..+|+..+
T Consensus 486 gglv--f~gt~dg~l~a~D~~t-----G~~lw~~~~~~~~~~~p~ty~~~G~qyv 533 (689)
T 1yiq_A 486 GNLV--FEGSADGRVIAYAADT-----GEKLWEQPAASGVMAAPVTYSVDGEQYV 533 (689)
T ss_dssp TTEE--EEECTTSEEEEEETTT-----CCEEEEEECSSCCCSCCEEEEETTEEEE
T ss_pred CCEE--EEECCCCcEEEEECCC-----CccceeeeCCCCcccCceEEEECCEEEE
Confidence 6666 7889999999999988 566655543221 113366677886443
No 262
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=93.27 E-value=1.8 Score=31.79 Aligned_cols=146 Identities=8% Similarity=-0.061 Sum_probs=81.5
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCccc-c-----eeEEEE---
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFN-S-----ISIMYE--- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~--- 97 (197)
.+.+++|++.. +.++.+-...+.|..+++....... +. . ........+++.+.+..+. + .+.+.+
T Consensus 74 ~~~~l~~d~~~-~~ly~~D~~~~~I~r~~~~g~~~~~-~~-~---~~~~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG 147 (349)
T 3v64_C 74 NAIALDFHHRR-ELVFWSDVTLDRILRANLNGSNVEE-VV-S---TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLDG 147 (349)
T ss_dssp CEEEEEEETTT-TEEEEEETTTTEEEEEETTSCSCEE-EE-C---SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ceEEEEEeccc-cEEEEEeccCCceEEEecCCCCceE-EE-e---CCCCCccEEEEecCCCeEEEEcCCCCeEEEEcCCC
Confidence 46788998752 5555666677888888877543211 10 0 1123456778877554432 1 244444
Q ss_pred --eeEecccCCCceeEEEEcC-CCeEEEEeeCC-CeEEEEEccCCcccceeeeeee-cCceecEEEEEEccCCCEEEEE-
Q psy13207 98 --AHSINAEHKDLIHDVAYDY-YGLRMATCSSD-QNIKVTRDVMGTRFDIETIGNF-EDHYCTVWRVSWNITGTIVASS- 171 (197)
Q Consensus 98 --~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d-~~i~~~d~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~~~- 171 (197)
...+..........+++++ ...++++-... +.|..+++.. .....+ ...-...+.++++|++..|+.+
T Consensus 148 ~~~~~l~~~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~dG------~~~~~~~~~~~~~PnGla~d~~~~~lY~aD 221 (349)
T 3v64_C 148 AHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDG------SGRRIIADTHLFWPNGLTIDYAGRRMYWVD 221 (349)
T ss_dssp CSCEEEECTTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTS------CSCEESCCSSCSCEEEEEEETTTTEEEEEE
T ss_pred CceEEEEeCCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCCC------CCcEEEEECCCCCcceEEEeCCCCEEEEEE
Confidence 1122112334567888873 33333555455 7888888753 111111 1223456889999866555544
Q ss_pred eCCCcEEEEEcCC
Q psy13207 172 GDDGCVRLWKLKK 184 (197)
Q Consensus 172 ~~dg~i~iw~~~~ 184 (197)
+..+.|..+++..
T Consensus 222 ~~~~~I~~~~~dG 234 (349)
T 3v64_C 222 AKHHVIERANLDG 234 (349)
T ss_dssp TTTTEEEEEETTS
T ss_pred CCCCEEEEEeCCC
Confidence 4667899898764
No 263
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=93.11 E-value=0.94 Score=36.82 Aligned_cols=149 Identities=7% Similarity=-0.040 Sum_probs=73.7
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEEccCCCccc-c-----eeEEEE-
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTWNHSFSRFN-S-----ISIMYE- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~-~-----~~~~~~- 97 (197)
..+.+++|.+.. +.++++-...+.|+.+++......... ...+. .......+++.+.+..|. + .|.+++
T Consensus 406 ~~p~gla~d~~~-~~Ly~sD~~~~~I~~~~~~g~~~~~~~--~~~i~~~~~~P~glavD~~~g~LY~tD~~~~~I~v~d~ 482 (699)
T 1n7d_A 406 RNVVALDTEVAS-NRIYWSDLSQRMICSTQLDRAHGVSSY--DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVADT 482 (699)
T ss_dssp TTCCCCEEETTT-TEEEECCTTTTSBEEEESCCCCC-CCC--CCBCCSCC--CCCEECCCSSSBCEECCTTTSCEEEEBS
T ss_pred cceEEEcccccc-CeEEEEecCCCeEEEEecCCCCCCcce--EEEEeCCCCCcceEEEEeeCCcEEEEeccCCeEEEEec
Confidence 356788898861 444455456688888888651100000 00010 112345677775443332 1 245554
Q ss_pred ----eeEecccCCCceeEEEEcC--CCeEEEEeeCC-CeEEEEEccCCcccceeeeeee-cCceecEEEEEEccCC-CEE
Q psy13207 98 ----AHSINAEHKDLIHDVAYDY--YGLRMATCSSD-QNIKVTRDVMGTRFDIETIGNF-EDHYCTVWRVSWNITG-TIV 168 (197)
Q Consensus 98 ----~~~~~~~~~~~i~~~~~~~--~~~~~~s~~~d-~~i~~~d~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~-~~l 168 (197)
...+..........|++++ ..+ +++-... +.|.++++.. .....+ ...-...+.|+|+|++ ++.
T Consensus 483 dg~~~~~l~~~~~~~P~giavDp~~g~l-y~td~~~~~~I~~~~~dG------~~~~~l~~~~l~~PnGlavd~~~~~LY 555 (699)
T 1n7d_A 483 KGVKRKTLFREQGSKPRAIVVDPVHGFM-YWTDWGTPAKIKKGGLNG------VDIYSLVTENIQWPNGITLDLLSGRLY 555 (699)
T ss_dssp SSCCEEEECCCSSCCCCCEECCSSSSCC-EECCCSSSCCEEBCCSSS------CCCCEESCSSCSSCCCEEECTTTCCEE
T ss_pred CCCceEEEEeCCCCCcceEEEccCCCcE-EEcccCCCCeEEEEeCCC------CCeeEEEeCCCCCccEEEEeccCCEEE
Confidence 2222211223456677762 233 1333222 6777766643 111111 1112345789999875 444
Q ss_pred EEEeCCCcEEEEEcCC
Q psy13207 169 ASSGDDGCVRLWKLKK 184 (197)
Q Consensus 169 ~~~~~dg~i~iw~~~~ 184 (197)
++-+..+.|..+++..
T Consensus 556 ~aD~~~~~I~~~d~dG 571 (699)
T 1n7d_A 556 WVDSKLHSISSIDVNG 571 (699)
T ss_dssp EEETTTTEEEEECSSS
T ss_pred EEecCCCeEEEEccCC
Confidence 5555677899998864
No 264
>4a2l_A BT_4663, two-component system sensor histidine kinase/RESP; transcription, beta-propeller; HET: PGE PG4 MES 2PE; 2.60A {Bacteroides thetaiotaomicron} PDB: 4a2m_A*
Probab=93.01 E-value=3.2 Score=34.05 Aligned_cols=145 Identities=9% Similarity=-0.030 Sum_probs=86.8
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc---eeEEEE-----
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS---ISIMYE----- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----- 97 (197)
..|.++...++ ++.|..|+.++-|..+|..+++.. .+...........|.++...+++...++ ++..|+
T Consensus 406 ~~v~~i~~d~~--g~~lWigt~~~Gl~~~d~~~~~~~-~~~~~~~~l~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~ 482 (795)
T 4a2l_A 406 NNIKAVYVDEK--KSLVYIGTHAGGLSILHRNSGQVE-NFNQRNSQLVNENVYAILPDGEGNLWLGTLSALVRFNPEQRS 482 (795)
T ss_dssp SCEEEEEEETT--TTEEEEEETTTEEEEEETTTCCEE-EECTTTSCCSCSCEEEEEECSSSCEEEEESSCEEEEETTTTE
T ss_pred ccEEEEEEcCC--CCEEEEEeCcCceeEEeCCCCcEE-EeecCCCCcCCCeeEEEEECCCCCEEEEecCceeEEeCCCCe
Confidence 46888888776 774566777777899998765421 1111000012456888888888876543 477777
Q ss_pred eeEecc------cCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec-------CceecEEEEEEcc
Q psy13207 98 AHSINA------EHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE-------DHYCTVWRVSWNI 163 (197)
Q Consensus 98 ~~~~~~------~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~-------~h~~~v~~~~~~p 163 (197)
...+.. .....|.++... ...+ ..|+. +-+..||..+. .. .+. .....|.++...+
T Consensus 483 ~~~~~~~~~~~~~~~~~i~~i~~d~~g~l--Wigt~-~Gl~~~~~~~~-----~~--~~~~~~~~~~l~~~~i~~i~~d~ 552 (795)
T 4a2l_A 483 FTTIEKEKDGTPVVSKQITTLFRDSHKRL--WIGGE-EGLSVFKQEGL-----DI--QKASILPVSNVTKLFTNCIYEAS 552 (795)
T ss_dssp EEECCBCTTCCBCCCCCEEEEEECTTCCE--EEEES-SCEEEEEEETT-----EE--EECCCSCSCGGGGSCEEEEEECT
T ss_pred EEEccccccccccCCceEEEEEECCCCCE--EEEeC-CceEEEeCCCC-----eE--EEecCCCCCCCCCCeeEEEEECC
Confidence 222210 123568888877 4445 34444 45777887642 21 111 1245789999999
Q ss_pred CCCEEEEEeCCCcEEEEEcCCC
Q psy13207 164 TGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 164 ~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
+|++.++.. + -+..||..+.
T Consensus 553 ~g~lWigT~-~-Gl~~~d~~~~ 572 (795)
T 4a2l_A 553 NGIIWVGTR-E-GFYCFNEKDK 572 (795)
T ss_dssp TSCEEEEES-S-CEEEEETTTT
T ss_pred CCCEEEEeC-C-CceeECCCCC
Confidence 998666543 3 5777887653
No 265
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=93.01 E-value=0.66 Score=36.70 Aligned_cols=57 Identities=14% Similarity=0.111 Sum_probs=36.0
Q ss_pred CCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 126 SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 126 ~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
.++.|..||..++ +.+-.+.. ...+........+..++.++.||.++.+|.++++..
T Consensus 442 ~~g~l~a~D~~tG-----~~~W~~~~-~~~~~~~~~~t~gg~v~~g~~dg~l~a~D~~tG~~l 498 (571)
T 2ad6_A 442 EMGQIRAFDLTTG-----KAKWTKWE-KFAAWGGTLYTKGGLVWYATLDGYLKALDNKDGKEL 498 (571)
T ss_dssp CCEEEEEECTTTC-----CEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CCCeEEEEECCCC-----CEEEEecC-CCCccceeEEECCCEEEEEcCCCeEEEEECCCCCEE
Confidence 4688999998763 33322221 112222222334667778999999999999988754
No 266
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=92.81 E-value=2.2 Score=31.61 Aligned_cols=31 Identities=6% Similarity=-0.028 Sum_probs=24.4
Q ss_pred cEEEEEEccCCCEEEEE-eCCCcEEEEEcCCC
Q psy13207 155 TVWRVSWNITGTIVASS-GDDGCVRLWKLKKK 185 (197)
Q Consensus 155 ~v~~~~~~p~~~~l~~~-~~dg~i~iw~~~~~ 185 (197)
.-+.++|+||++.|+.+ +..+.|..|++...
T Consensus 222 ~pNGia~spDg~~lYvadt~~~~I~~~~~~~~ 253 (355)
T 3sre_A 222 FANGINISPDGKYVYIAELLAHKIHVYEKHAN 253 (355)
T ss_dssp SEEEEEECTTSSEEEEEEGGGTEEEEEEECTT
T ss_pred ccCcceECCCCCEEEEEeCCCCeEEEEEECCC
Confidence 45889999999877665 46789999998643
No 267
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=92.81 E-value=2.3 Score=31.73 Aligned_cols=148 Identities=7% Similarity=-0.077 Sum_probs=79.8
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc------eeEEEE--
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS------ISIMYE-- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~-- 97 (197)
..+.+++|.+.. +.++++-...+.|..+++....... +. . ........+++.+.+..|.. .+.+.+
T Consensus 116 ~~~~gl~~d~~~-~~ly~~D~~~~~I~r~~~~g~~~~~-~~-~---~~~~~p~glavd~~~g~lY~~d~~~~~I~~~~~d 189 (386)
T 3v65_B 116 ENAIALDFHHRR-ELVFWSDVTLDRILRANLNGSNVEE-VV-S---TGLESPGGLAVDWVHDKLYWTDSGTSRIEVANLD 189 (386)
T ss_dssp SCEEEEEEETTT-TEEEEEETTTTEEEEEETTSCCEEE-EE-C---SSCSCCCCEEEETTTTEEEEEETTTTEEEECBTT
T ss_pred CccEEEEEecCC-CeEEEEeCCCCcEEEEecCCCCcEE-EE-e---CCCCCccEEEEEeCCCeEEEEcCCCCeEEEEeCC
Confidence 356789998751 5556666677888888887543111 10 0 01224466777765444321 133333
Q ss_pred ---eeEecccCCCceeEEEEcC-CCeEEEEeeCC-CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEE-EE
Q psy13207 98 ---AHSINAEHKDLIHDVAYDY-YGLRMATCSSD-QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVA-SS 171 (197)
Q Consensus 98 ---~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d-~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~-~~ 171 (197)
...+..........+++++ ...++++-... +.|..+++... .........-...+.++++|++..|+ +-
T Consensus 190 g~~~~~l~~~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~-----~~~~~~~~~~~~PnGlavd~~~~~lY~aD 264 (386)
T 3v65_B 190 GAHRKVLLWQSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMDGS-----GRRIIADTHLFWPNGLTIDYAGRRMYWVD 264 (386)
T ss_dssp SCSCEEEECSSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETTSC-----SCEEEECSSCSCEEEEEEEGGGTEEEEEE
T ss_pred CCceEEeecCCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCCCC-----CcEEEEECCCCCeeeEEEeCCCCEEEEEE
Confidence 1111112234567788872 33333454444 77888877531 11111122233568899998655554 44
Q ss_pred eCCCcEEEEEcCC
Q psy13207 172 GDDGCVRLWKLKK 184 (197)
Q Consensus 172 ~~dg~i~iw~~~~ 184 (197)
+..+.|..+++..
T Consensus 265 ~~~~~I~~~d~dG 277 (386)
T 3v65_B 265 AKHHVIERANLDG 277 (386)
T ss_dssp TTTTEEEEECTTS
T ss_pred CCCCEEEEEeCCC
Confidence 5667888888764
No 268
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=92.64 E-value=3.6 Score=33.68 Aligned_cols=145 Identities=10% Similarity=-0.008 Sum_probs=84.6
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc---eeEEEE-----
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS---ISIMYE----- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~---~~~~~~----- 97 (197)
..|.++...++ |.+.+ |+.++-|..++..+++.. .+... ......|.++...+++...++ ++..|+
T Consensus 407 ~~v~~i~~d~~--g~lWi-gt~~~Gl~~~~~~~~~~~-~~~~~--~~~~~~v~~i~~d~~g~lwigt~~Gl~~~~~~~~~ 480 (781)
T 3v9f_A 407 NSVLCSLKDSE--GNLWF-GTYLGNISYYNTRLKKFQ-IIELE--KNELLDVRVFYEDKNKKIWIGTHAGVFVIDLASKK 480 (781)
T ss_dssp SBEEEEEECTT--SCEEE-EETTEEEEEECSSSCEEE-ECCST--TTCCCCEEEEEECTTSEEEEEETTEEEEEESSSSS
T ss_pred cceEEEEECCC--CCEEE-EeccCCEEEEcCCCCcEE-EeccC--CCCCCeEEEEEECCCCCEEEEECCceEEEeCCCCe
Confidence 56888888776 66444 666667888887655321 11100 012457888888888776543 467776
Q ss_pred eeEecccC-----CCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec---C-ceecEEEEEEccCCCE
Q psy13207 98 AHSINAEH-----KDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE---D-HYCTVWRVSWNITGTI 167 (197)
Q Consensus 98 ~~~~~~~~-----~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~---~-h~~~v~~~~~~p~~~~ 167 (197)
...+.... ...|.++... ...+ ..|+.++-+..+|.++. .+..+. + ....|.++...++|++
T Consensus 481 ~~~~~~~~~~~~~~~~i~~i~~d~~g~l--Wigt~~~Gl~~~~~~~~------~~~~~~~~~~l~~~~i~~i~~d~~g~l 552 (781)
T 3v9f_A 481 VIHHYDTSNSQLLENFVRSIAQDSEGRF--WIGTFGGGVGIYTPDMQ------LVRKFNQYEGFCSNTINQIYRSSKGQM 552 (781)
T ss_dssp CCEEECTTTSSCSCSCEEEEEECTTCCE--EEEESSSCEEEECTTCC------EEEEECTTTTCSCSCEEEEEECTTSCE
T ss_pred EEecccCcccccccceeEEEEEcCCCCE--EEEEcCCCEEEEeCCCC------eEEEccCCCCCCCCeeEEEEECCCCCE
Confidence 11221011 3568888877 4445 44555444666887541 122221 1 2356889999999986
Q ss_pred EEEEeCCCcEEEEEcCCC
Q psy13207 168 VASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 168 l~~~~~dg~i~iw~~~~~ 185 (197)
.++. .+|.+..||..+.
T Consensus 553 Wi~T-~~Glv~~~d~~~~ 569 (781)
T 3v9f_A 553 WLAT-GEGLVCFPSARNF 569 (781)
T ss_dssp EEEE-TTEEEEESCTTTC
T ss_pred EEEE-CCCceEEECCCCC
Confidence 6654 4666577887654
No 269
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=92.13 E-value=2.2 Score=34.45 Aligned_cols=59 Identities=8% Similarity=-0.050 Sum_probs=39.6
Q ss_pred eCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchh
Q psy13207 125 SSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKK 189 (197)
Q Consensus 125 ~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~ 189 (197)
..++.|..||..+ ++.+-.... ........+...+.+++.++.||.++.||.++++.+-
T Consensus 435 ~~~g~l~A~D~~t-----G~~~W~~~~-~~~~~~~~~~t~gg~vf~g~~dg~l~a~d~~tG~~l~ 493 (668)
T 1kv9_A 435 VVSGALLAWDPVK-----QKAAWKVPY-PTHWNGGTLSTAGNLVFQGTAAGQMHAYSADKGEALW 493 (668)
T ss_dssp GCEEEEEEEETTT-----TEEEEEEEE-SSSCCCCEEEETTTEEEEECTTSEEEEEETTTCCEEE
T ss_pred CccceEEEEeCCC-----CcEEEEccC-CCCCcCceeEeCCCEEEEECCcccchhhhhhcChhhe
Confidence 3558899999987 333332221 1222333445567889999999999999999887643
No 270
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=91.90 E-value=2.2 Score=29.50 Aligned_cols=68 Identities=9% Similarity=-0.020 Sum_probs=37.2
Q ss_pred eeEEEEcCCCeEEEEeeCCCeEEEEEccCC--cccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEE
Q psy13207 109 IHDVAYDYYGLRMATCSSDQNIKVTRDVMG--TRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180 (197)
Q Consensus 109 i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~--~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw 180 (197)
..++-|.++..+.++ .||.|.-++..+. ..+-......-.+--..+..|.+.|+|.+.+.. |+.++-.
T Consensus 90 F~a~~fD~~G~LYav--~dG~iyr~~pP~~~~~~Wl~~a~~vg~~gw~~~~~lff~p~G~Lyav~--dg~lyr~ 159 (236)
T 1tl2_A 90 FQFLFFDPNGYLYAV--SKDKLYKASPPQSDTDNWIARATEVGSGGWSGFKFLFFHPNGYLYAVH--GQQFYKA 159 (236)
T ss_dssp CSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHSEEEECSSGGGEEEEEECTTSCEEEEE--TTEEEEE
T ss_pred ceEEEECCCCCEEEe--CCCEEEEeCCCcCCCCceeccccEeccCCCCceEEEEECCCceEEEEe--CCcEEec
Confidence 355666655542244 6698887775431 111111111111112467899999999877666 7775433
No 271
>4hw6_A Hypothetical protein, IPT/TIG domain protein; putative carbohydrate bindning two domains protein, IPT/TIG (PF01833), 6-beta-propeller; HET: MSE; 1.70A {Bacteroides ovatus}
Probab=91.75 E-value=3.4 Score=31.39 Aligned_cols=143 Identities=7% Similarity=-0.008 Sum_probs=78.2
Q ss_pred eeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce------eEEEEee-
Q psy13207 28 VTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------SIMYEAH- 99 (197)
Q Consensus 28 v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~~~- 99 (197)
...++++| + |.++++-..++.|..++..++.....+. ..........++|+|+++.|..+ +..++..
T Consensus 230 P~giavd~~~--G~lyv~d~~~~~V~~~d~~~g~~~~~~~---~~~~~~~~~~ia~dpdG~~LYvad~~~~~I~~~~~d~ 304 (433)
T 4hw6_A 230 AKTCAVHPQN--GKIYYTRYHHAMISSYDPATGTLTEEEV---MMDTKGSNFHIVWHPTGDWAYIIYNGKHCIYRVDYNR 304 (433)
T ss_dssp BCCCEECTTT--CCEEECBTTCSEEEEECTTTCCEEEEEE---ECSCCSSCEEEEECTTSSEEEEEETTTTEEEEEEBCT
T ss_pred CCEEEEeCCC--CeEEEEECCCCEEEEEECCCCeEEEEEe---ccCCCCCcccEEEeCCCCEEEEEeCCCCEEEEEeCCC
Confidence 45678888 5 7766676677889988887554311111 11111223469999999854322 4444411
Q ss_pred ---------EecccC---------------CCceeEEEE---------cCCCeEEEEeeCCCeEEEEEccCCcccceeee
Q psy13207 100 ---------SINAEH---------------KDLIHDVAY---------DYYGLRMATCSSDQNIKVTRDVMGTRFDIETI 146 (197)
Q Consensus 100 ---------~~~~~~---------------~~~i~~~~~---------~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~ 146 (197)
.+. +. -.....+++ ..+.-++++-...+.|+.++.. +..
T Consensus 305 ~~~~~~~~~~~a-g~~g~~g~~dg~~~~a~~~~P~giav~~n~~y~~dd~~g~lyvaD~~n~~I~~~~~~------G~v- 376 (433)
T 4hw6_A 305 ETGKLAVPYIVC-GQHSSPGWVDGMGTGARLWGPNQGIFVKNEAYAGEEDEYDFYFCDRDSHTVRVLTPE------GRV- 376 (433)
T ss_dssp TTCCBCCCEEEE-ECTTCCCCBCEEGGGSBCSSEEEEEEEECGGGTTSSCCEEEEEEETTTTEEEEECTT------SEE-
T ss_pred CCcccCcEEEEE-ecCCCCccCCCcccceEEcCCccEEEEccccccccCCCCcEEEEECCCCEEEEECCC------CCE-
Confidence 111 10 112455777 4222222555556778877742 211
Q ss_pred eeecC------------------ceecEEEEEEc-cCCCEEEEEeCCCcEEEEEcC
Q psy13207 147 GNFED------------------HYCTVWRVSWN-ITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 147 ~~~~~------------------h~~~v~~~~~~-p~~~~l~~~~~dg~i~iw~~~ 183 (197)
..+.+ .-.....++++ ++|.++++-..++.|+.++++
T Consensus 377 ~t~~G~g~~~~~G~~dG~~~~~~~~~~P~giavd~~~g~lyVaD~~n~rIr~i~~e 432 (433)
T 4hw6_A 377 TTYAGRGNSREWGYVDGELRSQALFNHPTSIAYDMKRKCFYIGDCDNHRVRKIAPE 432 (433)
T ss_dssp EEEECCCTTCSSCCBCEETTTTCBCSSEEEEEEETTTTEEEEEEGGGTEEEEEEEC
T ss_pred EEEEeCCCCCccccCCCccccccEeCCCcEEEEECCCCEEEEEeCCCCEEEEEecC
Confidence 11111 11236789999 677777776777888887764
No 272
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=91.37 E-value=1.1 Score=35.59 Aligned_cols=57 Identities=16% Similarity=0.354 Sum_probs=35.5
Q ss_pred CCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 126 SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 126 ~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
.++.|..||..++ +.+-..... .++..-.....+.+++.++.||.++.||.++++..
T Consensus 464 ~~G~l~A~D~~tG-----~~~W~~~~~-~~~~~g~~~tagglvf~g~~dg~l~A~D~~tG~~l 520 (582)
T 1flg_A 464 HVGSLRAMDPVSG-----KVVWEHKEH-LPLWAGVLATAGNLVFTGTGDGYFKAFDAKSGKEL 520 (582)
T ss_dssp CSEEEEEECTTTC-----CEEEEEEES-SCCCSCCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CcceEEEEECCCC-----CEEEEecCC-CCCcccceEeCCCEEEEECCCCcEEEEECCCCCEE
Confidence 4688999999873 332222111 11111112224667888999999999999988753
No 273
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=91.29 E-value=3.1 Score=30.09 Aligned_cols=155 Identities=10% Similarity=0.036 Sum_probs=81.2
Q ss_pred CCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----e-EEEE-
Q psy13207 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----S-IMYE- 97 (197)
Q Consensus 24 h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~-~~~~- 97 (197)
+...+..+.+.++ +..++.+ .+|.|.. ....+ .+|..... .....+..+.+.+++..++.+ + +-.|
T Consensus 120 ~~~~~~~i~~~~~--~~~~~~~-~~g~v~~-S~DgG---~tW~~~~~-~~~~~~~~~~~~~~~~~~~~g~~G~~~~S~d~ 191 (327)
T 2xbg_A 120 LPGSPRLIKALGN--GSAEMIT-NVGAIYR-TKDSG---KNWQALVQ-EAIGVMRNLNRSPSGEYVAVSSRGSFYSTWEP 191 (327)
T ss_dssp CSSCEEEEEEEET--TEEEEEE-TTCCEEE-ESSTT---SSEEEEEC-SCCCCEEEEEECTTSCEEEEETTSSEEEEECT
T ss_pred CCCCeEEEEEECC--CCEEEEe-CCccEEE-EcCCC---CCCEEeec-CCCcceEEEEEcCCCcEEEEECCCcEEEEeCC
Confidence 3345677777665 6666655 4554421 11222 22332211 113467888898888776543 1 1111
Q ss_pred ----eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeee-cCceecEEEEEEccCCCEEEEE
Q psy13207 98 ----AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF-EDHYCTVWRVSWNITGTIVASS 171 (197)
Q Consensus 98 ----~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~~l~~~ 171 (197)
-..+.......+..+.+. ...+ ...+.+|.+++.+...+..+ ..+..- ..+...+.++++.|++.+++++
T Consensus 192 gG~tW~~~~~~~~~~~~~~~~~~~g~~--~~~~~~G~~~~s~~D~G~tW--~~~~~~~~~~~~~~~~v~~~~~~~~~~~g 267 (327)
T 2xbg_A 192 GQTAWEPHNRTTSRRLHNMGFTPDGRL--WMIVNGGKIAFSDPDNSENW--GELLSPLRRNSVGFLDLAYRTPNEVWLAG 267 (327)
T ss_dssp TCSSCEEEECCSSSCEEEEEECTTSCE--EEEETTTEEEEEETTEEEEE--CCCBCTTSSCCSCEEEEEESSSSCEEEEE
T ss_pred CCCceeECCCCCCCccceeEECCCCCE--EEEeCCceEEEecCCCCCee--EeccCCcccCCcceEEEEecCCCEEEEEe
Confidence 011111344567788887 4445 55667788777642211111 111110 0122357889999888877665
Q ss_pred eCCCcEEEEEcCCCcchhhhh
Q psy13207 172 GDDGCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 172 ~~dg~i~iw~~~~~~~~~~~~ 192 (197)
. +|.+ ++..+.++.|..+.
T Consensus 268 ~-~g~i-~~S~DgG~tW~~~~ 286 (327)
T 2xbg_A 268 G-AGAL-LCSQDGGQTWQQDV 286 (327)
T ss_dssp S-TTCE-EEESSTTSSCEECG
T ss_pred C-CCeE-EEeCCCCcccEEcC
Confidence 4 6776 45566666776554
No 274
>3tc9_A Hypothetical hydrolase; 6-bladed beta-propeller, immunoglobulin-like, structural GEN joint center for structural genomics, JCSG; 2.23A {Bacteroides thetaiotaomicron}
Probab=91.21 E-value=3.9 Score=31.02 Aligned_cols=57 Identities=11% Similarity=0.044 Sum_probs=37.6
Q ss_pred ceeEEEECC-CCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcc
Q psy13207 27 SVTDVKFGP-KQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRF 89 (197)
Q Consensus 27 ~v~~~~~~~-~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 89 (197)
...+++++| + +.++++-..++.|..++........ ............++|+|+++++
T Consensus 227 ~p~giavdp~~--g~lyv~d~~~~~V~~~~~~~~~~~~----~~~~~~~~~P~gia~~pdG~~l 284 (430)
T 3tc9_A 227 NCNGAETHPIN--GELYFNSWNAGQVFRYDFTTQETTP----LFTIQDSGWEFHIQFHPSGNYA 284 (430)
T ss_dssp SCCCEEECTTT--CCEEEEETTTTEEEEEETTTTEEEE----EEECSSSSCCEEEEECTTSSEE
T ss_pred CceEEEEeCCC--CEEEEEECCCCEEEEEECCCCcEEE----EEEcCCCCcceeEEEcCCCCEE
Confidence 356778899 5 7777777777899999987553211 1111112346789999999854
No 275
>1n7d_A LDL receptor, low-density lipoprotein receptor; familial hypercholesterolemia, cholestero metabolism, lipid transport; HET: NAG BMA MAN KEG; 3.70A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1 g.3.11.1 g.3.11.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 g.12.1.1 PDB: 2lgp_A 1xfe_A 1f5y_A 1ldl_A 1ldr_A 1d2j_A 1f8z_A
Probab=91.17 E-value=1.6 Score=35.51 Aligned_cols=152 Identities=9% Similarity=-0.063 Sum_probs=75.9
Q ss_pred eeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-------eEEEE---
Q psy13207 28 VTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-------SIMYE--- 97 (197)
Q Consensus 28 v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~--- 97 (197)
...+++.+.. +.++++-...+.|.+.++.......... ........++++|.+.+|..+ |..++
T Consensus 455 P~glavD~~~-g~LY~tD~~~~~I~v~d~dg~~~~~l~~-----~~~~~P~giavDp~~g~ly~td~~~~~~I~~~~~dG 528 (699)
T 1n7d_A 455 PDGLAVDWIH-SNIYWTDSVLGTVSVADTKGVKRKTLFR-----EQGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG 528 (699)
T ss_dssp CCCEECCCSS-SBCEECCTTTSCEEEEBSSSCCEEEECC-----CSSCCCCCEECCSSSSCCEECCCSSSCCEEBCCSSS
T ss_pred cceEEEEeeC-CcEEEEeccCCeEEEEecCCCceEEEEe-----CCCCCcceEEEccCCCcEEEcccCCCCeEEEEeCCC
Confidence 4567777541 5556665667888888876542111000 012345677888765543221 22222
Q ss_pred --eeEecccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC
Q psy13207 98 --AHSINAEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD 174 (197)
Q Consensus 98 --~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d 174 (197)
...+....-...+.|++++ ...++++-...+.|.++++... ....+............+++..+ .++++....
T Consensus 529 ~~~~~l~~~~l~~PnGlavd~~~~~LY~aD~~~~~I~~~d~dG~---~~~~~~~~~~~~~~P~glavd~~-~lywtd~~~ 604 (699)
T 1n7d_A 529 VDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG---NRKTILEDEKRLAHPFSLAVFED-KVFWTDIIN 604 (699)
T ss_dssp CCCCEESCSSCSSCCCEEECTTTCCEEEEETTTTEEEEECSSSS---CCEEECCCSSSCSSCCCCEEETT-EEEEECSTT
T ss_pred CCeeEEEeCCCCCccEEEEeccCCEEEEEecCCCeEEEEccCCC---ceEEEEecCCcCCCceEeEEECC-EEEEEeCCC
Confidence 1111101223456788872 2222255556778888888531 11222211111122344555443 455555667
Q ss_pred CcEEEEEcCCCcchh
Q psy13207 175 GCVRLWKLKKKRKKK 189 (197)
Q Consensus 175 g~i~iw~~~~~~~~~ 189 (197)
+.|..++..+++...
T Consensus 605 ~~V~~~d~~~G~~~~ 619 (699)
T 1n7d_A 605 EAIFSANRLTGSDVN 619 (699)
T ss_dssp TCEEEEETTTEEEEE
T ss_pred CeEEEEEccCCCceE
Confidence 889999876654433
No 276
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=90.89 E-value=3.4 Score=29.87 Aligned_cols=148 Identities=9% Similarity=-0.021 Sum_probs=80.3
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCccc-c-----eeEEEE---
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFN-S-----ISIMYE--- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~-----~~~~~~--- 97 (197)
.+.+++|.+.. +.++.+-...+.|..+++......... .. ..-.....+++.+.+..+. + .+.+++
T Consensus 36 ~~~~ld~d~~~-~~lyw~D~~~~~I~r~~~~g~~~~~~~-~~---~~l~~p~glavd~~~g~ly~~d~~~~~I~~~~~dG 110 (318)
T 3sov_A 36 DAAAVDFVFSH-GLIYWSDVSEEAIKRTEFNKTESVQNV-VV---SGLLSPDGLACDWLGEKLYWTDSETNRIEVSNLDG 110 (318)
T ss_dssp EEEEEEEEGGG-TEEEEEETTTTEEEEEETTSSSCCCEE-EE---ECCSCCCEEEEETTTTEEEEEETTTTEEEEEETTS
T ss_pred ccEEEEEEeCC-CEEEEEECCCCcEEEEEccCCCceEEE-Ec---CCCCCccEEEEEcCCCeEEEEECCCCEEEEEECCC
Confidence 46688999852 566666667788988888765321110 01 1123456777776444332 1 245555
Q ss_pred --eeEecccCCCceeEEEEcC-CCeEEEEe-eCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEE-Ee
Q psy13207 98 --AHSINAEHKDLIHDVAYDY-YGLRMATC-SSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVAS-SG 172 (197)
Q Consensus 98 --~~~~~~~~~~~i~~~~~~~-~~~~~~s~-~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~-~~ 172 (197)
...+..........+++.+ ...++.+- +..+.|...++.... ...+ ....-...+.++++|++..|+. -+
T Consensus 111 ~~~~~l~~~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG~~---~~~~--~~~~l~~Pnglavd~~~~~lY~aD~ 185 (318)
T 3sov_A 111 SLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGSS---RFII--INSEIYWPNGLTLDYEEQKLYWADA 185 (318)
T ss_dssp CSCEEEECSSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTSCS---CEEE--ECSSCSCEEEEEEETTTTEEEEEET
T ss_pred CcEEEEEeCCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCCCC---eEEE--EECCCCCccEEEEeccCCEEEEEEC
Confidence 1122112334567788872 22222443 235778877775310 1111 1122235589999996655554 45
Q ss_pred CCCcEEEEEcCC
Q psy13207 173 DDGCVRLWKLKK 184 (197)
Q Consensus 173 ~dg~i~iw~~~~ 184 (197)
..+.|..+|+..
T Consensus 186 ~~~~I~~~d~dG 197 (318)
T 3sov_A 186 KLNFIHKSNLDG 197 (318)
T ss_dssp TTTEEEEEETTS
T ss_pred CCCEEEEEcCCC
Confidence 678899998864
No 277
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=90.66 E-value=2.2 Score=34.08 Aligned_cols=57 Identities=16% Similarity=0.148 Sum_probs=35.2
Q ss_pred CCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 126 SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 126 ~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
.++.|..||..++ +.+-.... ..+...-.....+.+++.++.||.++.||.++++..
T Consensus 451 ~~G~l~A~D~~tG-----~~~W~~~~-~~~~~~g~~~tagg~vf~gt~dg~l~A~D~~tG~~l 507 (599)
T 1w6s_A 451 GLGQIKAYNAITG-----DYKWEKME-RFAVWGGTMATAGDLVFYGTLDGYLKARDSDTGDLL 507 (599)
T ss_dssp CCEEEEEECTTTC-----CEEEEEEE-SSCCCSBCEEETTTEEEEECTTSEEEEEETTTCCEE
T ss_pred CcCeEEEEECCCC-----CEEeEecC-CCCccCcceEecCCEEEEECCCCeEEEEECCCCCEE
Confidence 4588999999773 32222210 111111112235677888999999999999998753
No 278
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=89.95 E-value=5.3 Score=30.57 Aligned_cols=58 Identities=10% Similarity=0.063 Sum_probs=34.6
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee---ccCCCeeeEEEccC
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV---ACPTLASCLTWNHS 85 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~ 85 (197)
...++|+|.|+ |+++++-...+.|++++..++.......+...+ ........++|+|+
T Consensus 27 ~~P~~~a~~pd--G~l~V~e~~gg~I~~~~~~~g~~~~~~~~~~~~~~~~g~~Gllgia~~Pd 87 (454)
T 1cru_A 27 NKPHALLWGPD--NQIWLTERATGKILRVNPESGSVKTVFQVPEIVNDADGQNGLLGFAFHPD 87 (454)
T ss_dssp SSEEEEEECTT--SCEEEEETTTCEEEEECTTTCCEEEEEECTTCCCCTTSSCSEEEEEECTT
T ss_pred CCceEEEEcCC--CcEEEEEcCCCEEEEEECCCCcEeEEecCCccccccCCCCceeEEEECCC
Confidence 35679999998 987776544457888876544321111111111 12456678999995
No 279
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=89.76 E-value=4.6 Score=29.60 Aligned_cols=27 Identities=22% Similarity=0.399 Sum_probs=20.9
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEE
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYE 55 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~ 55 (197)
.....++|.|+ |+++++ ..+|.|.+++
T Consensus 31 ~~P~~ia~~pd--G~l~V~-e~~g~I~~i~ 57 (352)
T 2ism_A 31 EVPWALAFLPD--GGMLIA-ERPGRIRLFR 57 (352)
T ss_dssp SCEEEEEECTT--SCEEEE-ETTTEEEEEE
T ss_pred CCceEEEEcCC--CeEEEE-eCCCeEEEEE
Confidence 35678999998 885555 5669999988
No 280
>3kya_A Putative phosphatase; structural genomics, joint center for structural genomics, JCSG, protein structure initiative, PS hydrolase; HET: MSE; 1.77A {Bacteroides thetaiotaomicron}
Probab=89.15 E-value=6.6 Score=30.55 Aligned_cols=41 Identities=7% Similarity=0.076 Sum_probs=26.4
Q ss_pred cEEEEEEccC-CCEEEEEeCCCcEEEEEcCCCcchhhhhhhh
Q psy13207 155 TVWRVSWNIT-GTIVASSGDDGCVRLWKLKKKRKKKKEEEEE 195 (197)
Q Consensus 155 ~v~~~~~~p~-~~~l~~~~~dg~i~iw~~~~~~~~~~~~~~~ 195 (197)
....|+++++ |.+.++=+.+..|+.+++..........+++
T Consensus 445 ~P~gIavd~~~g~lyVaD~~N~rIrki~~~~~~~~~~~~~~~ 486 (496)
T 3kya_A 445 DVSGLVYDDVKEMFYVHDQVGHTIRTISMEQEENVAGDENIP 486 (496)
T ss_dssp SEEEEEEETTTTEEEEEETTTTEEEEEEECCCC---------
T ss_pred CCcEEEEECCCCEEEEEeCCCCEEEEEECCCCcccccCCCCc
Confidence 4678999996 8777777788999999998766655554444
No 281
>1flg_A Protein (quinoprotein ethanol dehydrogenase); superbarrel, oxidoreductase; HET: PQQ; 2.60A {Pseudomonas aeruginosa} SCOP: b.70.1.1
Probab=88.27 E-value=5 Score=31.84 Aligned_cols=50 Identities=14% Similarity=0.105 Sum_probs=30.7
Q ss_pred cCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecE-EEEEEccCCC-EEEEE
Q psy13207 115 DYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTV-WRVSWNITGT-IVASS 171 (197)
Q Consensus 115 ~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v-~~~~~~p~~~-~l~~~ 171 (197)
.+..+ +.++.|+.++.||.++ ++.+-.++...... .-+.|..+|+ |+++.
T Consensus 496 agglv--f~g~~dg~l~A~D~~t-----G~~lW~~~~~~g~~a~P~~y~~~G~qYv~~~ 547 (582)
T 1flg_A 496 AGNLV--FTGTGDGYFKAFDAKS-----GKELWKFQTGSGIVSPPITWEQDGEQYLGVT 547 (582)
T ss_dssp TTTEE--EEECTTSEEEEEETTT-----CCEEEEEECSSCCCSCCEEEEETTEEEEEEE
T ss_pred CCCEE--EEECCCCcEEEEECCC-----CCEEEEecCCCCcccCceEEEECCEEEEEEE
Confidence 35556 6789999999999987 55555544322111 1255667776 44443
No 282
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=88.06 E-value=5.8 Score=28.50 Aligned_cols=148 Identities=7% Similarity=-0.056 Sum_probs=81.0
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCc---ccccceeccceec-cCCCeeeEEEccCCCcc-cc-----eeE
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDV---MNLSQWCLQHEVA-CPTLASCLTWNHSFSRF-NS-----ISI 94 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~---~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~-~~-----~~~ 94 (197)
.....++.|++.. +.++++-...+.|..+++... ..... .+. .-.....+++++.+..+ .+ .+.
T Consensus 29 ~~~p~g~~~d~~~-~~ly~~D~~~~~I~~~~~~g~~~~~~~~~-----~~~~~~~~p~glavd~~~~~ly~~d~~~~~I~ 102 (316)
T 1ijq_A 29 LRNVVALDTEVAS-NRIYWSDLSQRMICSTQLDRAHGVSSYDT-----VISRDIQAPDGLAVDWIHSNIYWTDSVLGTVS 102 (316)
T ss_dssp CSSEEEEEEETTT-TEEEEEETTTTEEEEEEC--------CEE-----EECSSCSCCCEEEEETTTTEEEEEETTTTEEE
T ss_pred CCceEEEEEEeCC-CEEEEEECCCCcEEEEECCCCCCCcccEE-----EEeCCCCCcCEEEEeecCCeEEEEECCCCEEE
Confidence 3456789999861 456666667789999988752 11111 011 12345778887654433 21 255
Q ss_pred EEE-----eeEecccCCCceeEEEEcC-CCeEEEEeeCC-CeEEEEEccCCcccceeeeeee-cCceecEEEEEEccCCC
Q psy13207 95 MYE-----AHSINAEHKDLIHDVAYDY-YGLRMATCSSD-QNIKVTRDVMGTRFDIETIGNF-EDHYCTVWRVSWNITGT 166 (197)
Q Consensus 95 ~~~-----~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d-~~i~~~d~~~~~~~~~~~~~~~-~~h~~~v~~~~~~p~~~ 166 (197)
+++ ...+..........+++++ ...++++.... +.|..+++.. .....+ ...-.....++++|++.
T Consensus 103 ~~~~~g~~~~~~~~~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~dG------~~~~~~~~~~~~~P~gla~d~~~~ 176 (316)
T 1ijq_A 103 VADTKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG------VDIYSLVTENIQWPNGITLDLLSG 176 (316)
T ss_dssp EEETTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS------CCEEEEECSSCSCEEEEEEETTTT
T ss_pred EEeCCCCceEEEEECCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCCC------CCeEEEEECCCCCceEEEEeccCC
Confidence 555 1222112234567888873 33323444333 6788877753 111111 12234568899998766
Q ss_pred EEEEE-eCCCcEEEEEcCC
Q psy13207 167 IVASS-GDDGCVRLWKLKK 184 (197)
Q Consensus 167 ~l~~~-~~dg~i~iw~~~~ 184 (197)
.|+.+ +..+.|..+|+..
T Consensus 177 ~lY~~D~~~~~I~~~d~dg 195 (316)
T 1ijq_A 177 RLYWVDSKLHSISSIDVNG 195 (316)
T ss_dssp EEEEEETTTTEEEEEETTS
T ss_pred EEEEEECCCCeEEEEecCC
Confidence 55544 4667899999864
No 283
>3v65_B Low-density lipoprotein receptor-related protein; laminin-G, beta-propeller, protein binding; 3.30A {Rattus norvegicus}
Probab=87.79 E-value=6.9 Score=29.09 Aligned_cols=149 Identities=5% Similarity=-0.109 Sum_probs=79.4
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc-------eeEEEE--
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS-------ISIMYE-- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-- 97 (197)
....+++.+.. +.++++-...+.|.+.++....... + .. ..-.....++++|.+..+.. .+..++
T Consensus 160 ~p~glavd~~~-g~lY~~d~~~~~I~~~~~dg~~~~~-l-~~---~~l~~P~giavdp~~g~ly~td~~~~~~I~r~~~d 233 (386)
T 3v65_B 160 SPGGLAVDWVH-DKLYWTDSGTSRIEVANLDGAHRKV-L-LW---QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 233 (386)
T ss_dssp CCCCEEEETTT-TEEEEEETTTTEEEECBTTSCSCEE-E-EC---SSCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CccEEEEEeCC-CeEEEEcCCCCeEEEEeCCCCceEE-e-ec---CCCCCCcEEEEEcCCCeEEEeccCCCCEEEEEeCC
Confidence 34567777641 5555666666778777765432110 0 00 11245678888886655422 133333
Q ss_pred ---eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeC
Q psy13207 98 ---AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGD 173 (197)
Q Consensus 98 ---~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~ 173 (197)
...+....-...+.|+++ ....++++-...+.|..+|..... ...+ +.........+++ ..+.++.+...
T Consensus 234 G~~~~~~~~~~~~~PnGlavd~~~~~lY~aD~~~~~I~~~d~dG~~---~~~~--~~~~~~~P~giav-~~~~ly~td~~ 307 (386)
T 3v65_B 234 GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH---RKAV--ISQGLPHPFAITV-FEDSLYWTDWH 307 (386)
T ss_dssp SCSCEEEECSSCSCEEEEEEEGGGTEEEEEETTTTEEEEECTTSCS---CEEE--ECSSCSSEEEEEE-ETTEEEEEETT
T ss_pred CCCcEEEEECCCCCeeeEEEeCCCCEEEEEECCCCEEEEEeCCCCe---eEEE--EECCCCCceEEEE-ECCEEEEeeCC
Confidence 122211223446788887 222222555566888888876310 1111 2222334566777 35566666667
Q ss_pred CCcEEEEEcCCCcc
Q psy13207 174 DGCVRLWKLKKKRK 187 (197)
Q Consensus 174 dg~i~iw~~~~~~~ 187 (197)
.+.|..++..+++.
T Consensus 308 ~~~V~~~~~~~G~~ 321 (386)
T 3v65_B 308 TKSINSANKFTGKN 321 (386)
T ss_dssp TTEEEEEETTTCCS
T ss_pred CCeEEEEECCCCcc
Confidence 78888888555443
No 284
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=87.57 E-value=1.6 Score=36.91 Aligned_cols=38 Identities=11% Similarity=0.052 Sum_probs=30.7
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCccccccee
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWC 66 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~ 66 (197)
.+.++...++ ..++++-+.|+++|+|++.+++.+.+..
T Consensus 237 ~~~~~~~~~~--~~~lftl~~D~~LRiWsl~t~~~v~t~d 274 (950)
T 4gq2_M 237 TIISMIFLST--YNVLVMLSLDYKLKVLDLSTNQCVETIE 274 (950)
T ss_dssp CEEEEEEETT--TTEEEEEETTCEEEEEETTTTEEEEEEE
T ss_pred eEEEEeecCC--CcEEEEEECCCEEEEEECCCCCeEeeec
Confidence 4667777776 7899999999999999999987655443
No 285
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=87.50 E-value=6 Score=28.09 Aligned_cols=73 Identities=12% Similarity=-0.012 Sum_probs=42.8
Q ss_pred CceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC--cEEEEEcCC
Q psy13207 107 DLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG--CVRLWKLKK 184 (197)
Q Consensus 107 ~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg--~i~iw~~~~ 184 (197)
.....++|+++.-++++-...+.|..||... .....+. -......+++.|+|+++++..... .|..++..+
T Consensus 32 ~~pegia~~~~g~lyv~d~~~~~I~~~d~~g------~~~~~~~-~~~~p~gia~~~dG~l~vad~~~~~~~v~~~d~~~ 104 (306)
T 2p4o_A 32 TFLENLASAPDGTIFVTNHEVGEIVSITPDG------NQQIHAT-VEGKVSGLAFTSNGDLVATGWNADSIPVVSLVKSD 104 (306)
T ss_dssp CCEEEEEECTTSCEEEEETTTTEEEEECTTC------CEEEEEE-CSSEEEEEEECTTSCEEEEEECTTSCEEEEEECTT
T ss_pred CCcceEEECCCCCEEEEeCCCCeEEEECCCC------ceEEEEe-CCCCceeEEEcCCCcEEEEeccCCcceEEEEcCCC
Confidence 4566788873222225555778888888753 1111111 123578899999999766654432 366666555
Q ss_pred Cc
Q psy13207 185 KR 186 (197)
Q Consensus 185 ~~ 186 (197)
++
T Consensus 105 g~ 106 (306)
T 2p4o_A 105 GT 106 (306)
T ss_dssp SC
T ss_pred Ce
Confidence 43
No 286
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=87.45 E-value=7 Score=28.82 Aligned_cols=33 Identities=15% Similarity=0.070 Sum_probs=25.5
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCc
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDV 59 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~ 59 (197)
-...+.++|.|+ |.++++--..|.|++++...+
T Consensus 31 L~~P~~ia~~pd--G~llVter~~G~I~~v~~~~g 63 (347)
T 3das_A 31 LNSPWGLAPLPG--GDLLVSSRDEATITRVDAKTG 63 (347)
T ss_dssp CSSEEEEEECTT--SCEEEEETTTCEEEEECTTTC
T ss_pred CCCceEEEEcCC--CcEEEEEecCCEEEEEECCCC
Confidence 445789999998 887777655899998876544
No 287
>4gq2_M Nucleoporin NUP120; beta propeller alpha helical, component of nuclear pore COMP transport protein; 2.40A {Schizosaccharomyces pombe} PDB: 4fhm_B
Probab=86.88 E-value=5 Score=33.98 Aligned_cols=36 Identities=11% Similarity=0.062 Sum_probs=30.6
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 155 TVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 155 ~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
.+.+++..++..++++-+.|+++++|++.+++....
T Consensus 237 ~~~~~~~~~~~~~lftl~~D~~LRiWsl~t~~~v~t 272 (950)
T 4gq2_M 237 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 272 (950)
T ss_dssp CEEEEEEETTTTEEEEEETTCEEEEEETTTTEEEEE
T ss_pred eEEEEeecCCCcEEEEEECCCEEEEEECCCCCeEee
Confidence 567788888889999999999999999998876544
No 288
>2p4o_A Hypothetical protein; putative lactonase, structural genomics, joint center for ST genomics, JCSG, protein structure initiative, PSI-2; HET: MSE; 1.90A {Nostoc punctiforme} SCOP: b.68.6.3
Probab=86.83 E-value=6.6 Score=27.88 Aligned_cols=154 Identities=9% Similarity=-0.024 Sum_probs=83.4
Q ss_pred eeeeeeecCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce--
Q psy13207 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-- 92 (197)
Q Consensus 15 w~~~~~~~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-- 92 (197)
.++...+... .....++|+++ ++++++-..++.|..+|..... ...+ ........+++.++++.+++.
T Consensus 22 ~~~~~~~p~~-~~pegia~~~~--g~lyv~d~~~~~I~~~d~~g~~-~~~~------~~~~~p~gia~~~dG~l~vad~~ 91 (306)
T 2p4o_A 22 AKIITSFPVN-TFLENLASAPD--GTIFVTNHEVGEIVSITPDGNQ-QIHA------TVEGKVSGLAFTSNGDLVATGWN 91 (306)
T ss_dssp EEEEEEECTT-CCEEEEEECTT--SCEEEEETTTTEEEEECTTCCE-EEEE------ECSSEEEEEEECTTSCEEEEEEC
T ss_pred ceEeEeCCCC-CCcceEEECCC--CCEEEEeCCCCeEEEECCCCce-EEEE------eCCCCceeEEEcCCCcEEEEecc
Confidence 3444445432 46788999998 8877777788999999876531 1111 113467889999999865443
Q ss_pred -----eEEEE-----eeEecc-cCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeee--------eecCc
Q psy13207 93 -----SIMYE-----AHSINA-EHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIG--------NFEDH 152 (197)
Q Consensus 93 -----~~~~~-----~~~~~~-~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~--------~~~~h 152 (197)
+..++ +..+.. ........++.. +..+ +++-..++.|.++|..+.. ..... .....
T Consensus 92 ~~~~~v~~~d~~~g~~~~~~~~~~~~~~~g~~~~~~~~~-~v~d~~~g~i~~~d~~~~~---~~v~~~~~~~~~~~~~~~ 167 (306)
T 2p4o_A 92 ADSIPVVSLVKSDGTVETLLTLPDAIFLNGITPLSDTQY-LTADSYRGAIWLIDVVQPS---GSIWLEHPMLARSNSESV 167 (306)
T ss_dssp TTSCEEEEEECTTSCEEEEEECTTCSCEEEEEESSSSEE-EEEETTTTEEEEEETTTTE---EEEEEECGGGSCSSTTCC
T ss_pred CCcceEEEEcCCCCeEEEEEeCCCccccCcccccCCCcE-EEEECCCCeEEEEeCCCCc---EeEEEECCccccccccCC
Confidence 22233 111110 111222333333 2222 2444457888888875310 11110 00011
Q ss_pred eecEEEEEEccCCCEEE-EEeCCCcEEEEEcCC
Q psy13207 153 YCTVWRVSWNITGTIVA-SSGDDGCVRLWKLKK 184 (197)
Q Consensus 153 ~~~v~~~~~~p~~~~l~-~~~~dg~i~iw~~~~ 184 (197)
....+.+ +|+++.|+ +-+..+.|..+++..
T Consensus 168 ~~~pngi--s~dg~~lyv~d~~~~~I~~~~~~~ 198 (306)
T 2p4o_A 168 FPAANGL--KRFGNFLYVSNTEKMLLLRIPVDS 198 (306)
T ss_dssp SCSEEEE--EEETTEEEEEETTTTEEEEEEBCT
T ss_pred CCcCCCc--CcCCCEEEEEeCCCCEEEEEEeCC
Confidence 1233445 78887554 445678899999874
No 289
>1k3i_A Galactose oxidase precursor; blade beta propeller, prosequence form, precursor of copper enzyme., oxidoreductase; 1.40A {Fusarium SP} SCOP: b.1.18.2 b.18.1.1 b.69.1.1 PDB: 1gof_A 1gog_A 1goh_A 2eie_A 2jkx_A 2vz1_A 2vz3_A 2eic_A 2eib_A 1t2x_A 2eid_A 2wq8_A
Probab=86.82 E-value=11 Score=30.28 Aligned_cols=57 Identities=9% Similarity=0.131 Sum_probs=33.0
Q ss_pred eeEEEECCCCCCcEEEEEeC-CCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCccc
Q psy13207 28 VTDVKFGPKQLGLVLATCAA-DGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFN 90 (197)
Q Consensus 28 v~~~~~~~~~~~~~l~s~~~-dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 90 (197)
..++.+.++ +.+++.|+. +..+.+||..+.+ |.....+.....-.++...++++.++
T Consensus 245 ~~~~~~~~~--g~lyv~GG~~~~~v~~yd~~t~~----W~~~~~~~~~R~~~s~~~~~dg~iyv 302 (656)
T 1k3i_A 245 CPGISMDGN--GQIVVTGGNDAKKTSLYDSSSDS----WIPGPDMQVARGYQSSATMSDGRVFT 302 (656)
T ss_dssp SCEEEECTT--SCEEEECSSSTTCEEEEEGGGTE----EEECCCCSSCCSSCEEEECTTSCEEE
T ss_pred cccccCCCC--CCEEEeCCCCCCceEEecCcCCc----eeECCCCCccccccceEEecCCeEEE
Confidence 345677787 889999884 4689999987642 33222222222223444455555543
No 290
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=86.78 E-value=12 Score=30.94 Aligned_cols=153 Identities=7% Similarity=-0.042 Sum_probs=80.8
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEEccCCCcccce------eEEEE
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTWNHSFSRFNSI------SIMYE 97 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~~------~~~~~ 97 (197)
...+.+++|.+.. +.++++-...+.|+.+++......... ...+. .......|++.+.+..|..+ |.+.+
T Consensus 423 ~~~~~gl~~d~~~-~~lY~sD~~~~~I~~~~l~g~~~~~~~--~~vi~~~l~~P~GLAvD~~~~~LY~tD~~~~~I~v~~ 499 (791)
T 3m0c_C 423 LRNVVALDTEVAS-NRIYWSDLSQRMICSTQLDRAHGVSSY--DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVAD 499 (791)
T ss_dssp CSSEEEEEEETTT-TEEEEEETTTTEEEEEEC--------C--EEEECSSCSCCCEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCceEEEeecccC-CeeEEeeccceeEEEEeccCCCCCcce--eEEEecCCCCcceeeeeecCCcEEEEecCCCeEEEEe
Confidence 3456788898841 556666666778888887643210000 01111 12345678888776544322 44444
Q ss_pred -----eeEecccCCCceeEEEEcCC-CeEEEEeeC-CCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEE
Q psy13207 98 -----AHSINAEHKDLIHDVAYDYY-GLRMATCSS-DQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVAS 170 (197)
Q Consensus 98 -----~~~~~~~~~~~i~~~~~~~~-~~~~~s~~~-d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~ 170 (197)
...+........+.|++++. ..++++-.. .+.|.+.++.. ......+.........|++++.+..|+.
T Consensus 500 ldG~~~~~l~~~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~dG-----~~~~~lv~~~l~~P~GLavD~~~~~LYw 574 (791)
T 3m0c_C 500 TKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNG-----VDIYSLVTENIQWPNGITLDLLSGRLYW 574 (791)
T ss_dssp TTSSSEEEEEECTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS-----CCEEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred CCCCeEEEEEeCCCCCcceEEEecCCCCEEEecCCCCCeEEEEecCC-----CceEEEEeCCCCCceEEEEecCCCeEEE
Confidence 22222123345678888732 222244323 36788888753 1111222223346788999986665555
Q ss_pred E-eCCCcEEEEEcCCC
Q psy13207 171 S-GDDGCVRLWKLKKK 185 (197)
Q Consensus 171 ~-~~dg~i~iw~~~~~ 185 (197)
+ ...+.|...++...
T Consensus 575 aD~~~~~I~~~d~dG~ 590 (791)
T 3m0c_C 575 VDSKLHSISSIDVNGG 590 (791)
T ss_dssp EETTTTEEEEEETTSC
T ss_pred EeCCCCcEEEEecCCC
Confidence 5 45567888887543
No 291
>2ad6_A Methanol dehydrogenase subunit 1; PQQ configuration, native, oxidoredu; HET: PQQ; 1.50A {Methylophilus methylotrophus} SCOP: b.70.1.1 PDB: 2ad7_A* 2ad8_A* 4aah_A* 1g72_A*
Probab=85.78 E-value=5.4 Score=31.52 Aligned_cols=48 Identities=10% Similarity=-0.054 Sum_probs=28.3
Q ss_pred CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCcee-cEEEEEEccCCCEEEE
Q psy13207 116 YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC-TVWRVSWNITGTIVAS 170 (197)
Q Consensus 116 ~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~-~v~~~~~~p~~~~l~~ 170 (197)
+..+ +.++.|+.|+.+|.++ ++.+-.+..... .-.-+.+..+|++++.
T Consensus 475 gg~v--~~g~~dg~l~a~D~~t-----G~~lw~~~~~~~~~~~p~~~~~~G~~yv~ 523 (571)
T 2ad6_A 475 GGLV--WYATLDGYLKALDNKD-----GKELWNFKMPSGGIGSPMTYSFKGKQYIG 523 (571)
T ss_dssp TTEE--EEECTTSEEEEEETTT-----CCEEEEEECSSCCCSCCEEEEETTEEEEE
T ss_pred CCEE--EEEcCCCeEEEEECCC-----CCEEEEEeCCCCcEeeeEEEEECCEEEEE
Confidence 5555 6688999999999987 455544432211 1112335567764443
No 292
>3v9f_A Two-component system sensor histidine kinase/RESP regulator, hybrid (ONE-component...; beta-propeller, beta-sandwich; 3.30A {Bacteroides thetaiotaomicron}
Probab=84.66 E-value=15 Score=30.03 Aligned_cols=147 Identities=10% Similarity=-0.034 Sum_probs=82.1
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc----eeEEEE----
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS----ISIMYE---- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~~~---- 97 (197)
..|.++...++ |. |-.|+.++-|..++..+.... .+. .........|.++...+++...+. ++..++
T Consensus 363 ~~v~~i~~d~~--g~-lWigt~~~Gl~~~~~~~~~~~-~~~-~~~~~~~~~v~~i~~d~~g~lWigt~~~Gl~~~~~~~~ 437 (781)
T 3v9f_A 363 KVVSSVCDDGQ--GK-LWIGTDGGGINVFENGKRVAI-YNK-ENRELLSNSVLCSLKDSEGNLWFGTYLGNISYYNTRLK 437 (781)
T ss_dssp SCEEEEEECTT--SC-EEEEEBSSCEEEEETTEEEEE-CC------CCCSBEEEEEECTTSCEEEEETTEEEEEECSSSC
T ss_pred cceEEEEEcCC--CC-EEEEeCCCcEEEEECCCCeEE-Ecc-CCCCCCCcceEEEEECCCCCEEEEeccCCEEEEcCCCC
Confidence 45888888776 65 445565666888887654321 111 000111456888888888776543 356665
Q ss_pred -eeEecc--cCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec---CceecEEEEEEccCCCEEEE
Q psy13207 98 -AHSINA--EHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE---DHYCTVWRVSWNITGTIVAS 170 (197)
Q Consensus 98 -~~~~~~--~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~---~h~~~v~~~~~~p~~~~l~~ 170 (197)
+..+.. .....|.++... ...+ ..|+. +-+..+|..+... ....... .....|.++...++|++.+.
T Consensus 438 ~~~~~~~~~~~~~~v~~i~~d~~g~l--wigt~-~Gl~~~~~~~~~~---~~~~~~~~~~~~~~~i~~i~~d~~g~lWig 511 (781)
T 3v9f_A 438 KFQIIELEKNELLDVRVFYEDKNKKI--WIGTH-AGVFVIDLASKKV---IHHYDTSNSQLLENFVRSIAQDSEGRFWIG 511 (781)
T ss_dssp EEEECCSTTTCCCCEEEEEECTTSEE--EEEET-TEEEEEESSSSSC---CEEECTTTSSCSCSCEEEEEECTTCCEEEE
T ss_pred cEEEeccCCCCCCeEEEEEECCCCCE--EEEEC-CceEEEeCCCCeE---EecccCcccccccceeEEEEEcCCCCEEEE
Confidence 222220 124568888777 3445 34445 5577888765211 1111111 11357899999999986654
Q ss_pred EeCCCcEEEEEcCC
Q psy13207 171 SGDDGCVRLWKLKK 184 (197)
Q Consensus 171 ~~~dg~i~iw~~~~ 184 (197)
+.++-+..+|.++
T Consensus 512 -t~~~Gl~~~~~~~ 524 (781)
T 3v9f_A 512 -TFGGGVGIYTPDM 524 (781)
T ss_dssp -ESSSCEEEECTTC
T ss_pred -EcCCCEEEEeCCC
Confidence 4434466787654
No 293
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=83.64 E-value=9.4 Score=26.88 Aligned_cols=65 Identities=15% Similarity=0.221 Sum_probs=35.2
Q ss_pred EEeeCC-----CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC-----cEEEEEcCCCcchhhh
Q psy13207 122 ATCSSD-----QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG-----CVRLWKLKKKRKKKKE 191 (197)
Q Consensus 122 ~s~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~ 191 (197)
+.|+.+ ..+.+||..+.+ ...+..+......-..+. .++++++.|+.++ .+.+||+.+ ..|..+
T Consensus 209 v~GG~~~~~~~~~~~~yd~~~~~---W~~~~~~~~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~v~~yd~~~-~~W~~~ 282 (302)
T 2xn4_A 209 AVGGHDGPLVRKSVEVYDPTTNA---WRQVADMNMCRRNAGVCA--VNGLLYVVGGDDGSCNLASVEYYNPTT-DKWTVV 282 (302)
T ss_dssp EECCBSSSSBCCCEEEEETTTTE---EEEECCCSSCCBSCEEEE--ETTEEEEECCBCSSSBCCCEEEEETTT-TEEEEC
T ss_pred EECCCCCCcccceEEEEeCCCCC---EeeCCCCCCccccCeEEE--ECCEEEEECCcCCCcccccEEEEcCCC-CeEEEC
Confidence 555543 467889987632 223322221111111222 2677888887653 489999876 446654
Q ss_pred h
Q psy13207 192 E 192 (197)
Q Consensus 192 ~ 192 (197)
+
T Consensus 283 ~ 283 (302)
T 2xn4_A 283 S 283 (302)
T ss_dssp S
T ss_pred C
Confidence 3
No 294
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=83.48 E-value=9.5 Score=26.81 Aligned_cols=65 Identities=12% Similarity=0.109 Sum_probs=35.3
Q ss_pred EEeeCC-----CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC-----CcEEEEEcCCCcchhhh
Q psy13207 122 ATCSSD-----QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD-----GCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 122 ~s~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~ 191 (197)
+.|+.+ ..+.+||..+.+ ...+..+.........+.+ ++++++.|+.+ ..+.+||+.+ ..|..+
T Consensus 211 v~GG~~~~~~~~~v~~yd~~~~~---W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~-~~W~~~ 284 (301)
T 2vpj_A 211 VVGGFDGTAHLSSVEAYNIRTDS---WTTVTSMTTPRCYVGATVL--RGRLYAIAGYDGNSLLSSIECYDPII-DSWEVV 284 (301)
T ss_dssp EECCBCSSSBCCCEEEEETTTTE---EEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBEEEEEEEETTT-TEEEEE
T ss_pred EEeCCCCCcccceEEEEeCCCCc---EEECCCCCCcccceeEEEE--CCEEEEEcCcCCCcccccEEEEcCCC-CeEEEc
Confidence 555543 468889987632 2333322221111122222 67777888765 3578888876 456554
Q ss_pred h
Q psy13207 192 E 192 (197)
Q Consensus 192 ~ 192 (197)
.
T Consensus 285 ~ 285 (301)
T 2vpj_A 285 T 285 (301)
T ss_dssp E
T ss_pred C
Confidence 3
No 295
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=83.23 E-value=10 Score=26.96 Aligned_cols=57 Identities=16% Similarity=0.102 Sum_probs=29.4
Q ss_pred eEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC--------------cEEEEEcCCCcchhhh
Q psy13207 129 NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG--------------CVRLWKLKKKRKKKKE 191 (197)
Q Consensus 129 ~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg--------------~i~iw~~~~~~~~~~~ 191 (197)
.+.+||..+.+ ...+..+.........+.+ ++++++.|+.++ .+.+||+.+ .+|..+
T Consensus 213 ~~~~yd~~~~~---W~~~~~~p~~r~~~~~~~~--~~~l~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~-~~W~~~ 283 (315)
T 4asc_A 213 SAEVYSITDNK---WAPFEAFPQERSSLSLVSL--VGTLYAIGGFATLETESGELVPTELNDIWRYNEEE-KKWEGV 283 (315)
T ss_dssp EEEEEETTTTE---EEEECCCSSCCBSCEEEEE--TTEEEEEEEEEEEECTTSCEEEEEEEEEEEEETTT-TEEEEE
T ss_pred eEEEEECCCCe---EEECCCCCCcccceeEEEE--CCEEEEECCccccCcCCccccccccCcEEEecCCC-Chhhhh
Confidence 46788887632 3333332221111122222 567777777642 367788765 346544
No 296
>3pbp_A Nucleoporin NUP82; beta-propeller, mRNA export, mRNP remodelling, nucleocytoplasmic transport, protein transport; HET: PGE; 2.60A {Saccharomyces cerevisiae} PDB: 3tkn_A
Probab=83.11 E-value=14 Score=28.35 Aligned_cols=32 Identities=6% Similarity=0.244 Sum_probs=28.3
Q ss_pred eecEEEEEEccC---CCEEEEEeCCCcEEEEEcCC
Q psy13207 153 YCTVWRVSWNIT---GTIVASSGDDGCVRLWKLKK 184 (197)
Q Consensus 153 ~~~v~~~~~~p~---~~~l~~~~~dg~i~iw~~~~ 184 (197)
..+|..+.|+|- +..|++-..|+.|++||+..
T Consensus 124 ~s~I~qVlWHPl~~~ds~LVVLtsD~~Ir~yDl~~ 158 (452)
T 3pbp_A 124 KSSIKKVLFHPKSYRDSCIVVLKEDDTITMFDILN 158 (452)
T ss_dssp CCCEEEEEECTTBGGGCEEEEEETTSCEEEEETTC
T ss_pred CCceeEEEeccccCCCCeEEEEecCCEEEEEEccc
Confidence 568999999994 56899999999999999986
No 297
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=82.75 E-value=0.94 Score=39.05 Aligned_cols=39 Identities=13% Similarity=0.085 Sum_probs=30.4
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceec
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCL 67 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~ 67 (197)
.+.++...++ ..++++-+.|+++|||++.++..+.+..+
T Consensus 239 ~~vs~~~~~~--~~~lftL~~D~~LRiWsl~t~~~v~t~DL 277 (1139)
T 4fhn_B 239 TIISMIFLST--YNVLVMLSLDYKLKVLDLSTNQCVETIEL 277 (1139)
T ss_dssp CBSCCEEETT--TTEEEEEBTTCEEEEEETTTTEEEEEEEC
T ss_pred eeEEeeccCC--ccEEEEEeCCCEEEEEECCCCCeEEeech
Confidence 4455566666 78999999999999999999876655443
No 298
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=82.72 E-value=13 Score=27.79 Aligned_cols=152 Identities=7% Similarity=-0.054 Sum_probs=79.3
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceec-cCCCeeeEEEccCCCcccc------eeEEEE
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA-CPTLASCLTWNHSFSRFNS------ISIMYE 97 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~~ 97 (197)
...+.+++|++.. +.++.+-...+.|..+++......... ...+. .......+++.+.+..|.. .+.+.+
T Consensus 111 ~~~~~~l~~d~~~-~~lywsD~~~~~I~~~~~~g~~~~~~~--~~~~~~~~~~p~glavD~~~~~lY~~d~~~~~I~~~~ 187 (400)
T 3p5b_L 111 LRNVVALDTEVAS-NRIYWSDLSQRMICSTQLDRAHGVSSY--DTVISRDIQAPDGLAVDWIHSNIYWTDSVLGTVSVAD 187 (400)
T ss_dssp CSCEEEEEEETTT-TEEEEEETTTTEEEEEEC------CCC--EEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEC
T ss_pred cCcceEEeeeecc-CceEEEecCCCeEEEEEcccCCCCCcc--eEEEeCCCCCcccEEEEecCCceEEEECCCCeEEEEe
Confidence 4567889999852 555566566788888887652210000 01111 1235567788774443321 134444
Q ss_pred -----eeEecccCCCceeEEEEcC-CCeEEEEee-CCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEE
Q psy13207 98 -----AHSINAEHKDLIHDVAYDY-YGLRMATCS-SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVAS 170 (197)
Q Consensus 98 -----~~~~~~~~~~~i~~~~~~~-~~~~~~s~~-~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~ 170 (197)
...+..........|++++ ...++++-. ..+.|...++... .........-.....++++|++..|+.
T Consensus 188 ~~g~~~~~l~~~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~dG~-----~~~~~~~~~l~~P~glavd~~~~~lY~ 262 (400)
T 3p5b_L 188 TKGVKRKTLFRENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLNGV-----DIYSLVTENIQWPNGITLDLLSGRLYW 262 (400)
T ss_dssp TTTCSEEEEEECSSCCEEEEEEETTTTEEEEEECSSSCCEEEEETTSC-----SCEEEECSSCSCEEEEEEETTTTEEEE
T ss_pred CCCCceEEEEeCCCCCcceEEEecccCeEEEEeCCCCCEEEEEeCCCC-----ccEEEEECCCCceEEEEEEeCCCEEEE
Confidence 1111102234467788873 333224432 3467887777531 111112222346688999987666655
Q ss_pred E-eCCCcEEEEEcCC
Q psy13207 171 S-GDDGCVRLWKLKK 184 (197)
Q Consensus 171 ~-~~dg~i~iw~~~~ 184 (197)
+ +..+.|..+|+..
T Consensus 263 aD~~~~~I~~~d~dG 277 (400)
T 3p5b_L 263 VDSKLHSISSIDVNG 277 (400)
T ss_dssp EETTTTEEEEEETTS
T ss_pred EECCCCEEEEEeCCC
Confidence 5 4567888888864
No 299
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=82.49 E-value=13 Score=27.57 Aligned_cols=58 Identities=19% Similarity=0.243 Sum_probs=35.6
Q ss_pred EEeeC--CCeEEEEEccCCcccceeeeeeecC-------ceecEEEEEE--ccC-CC-EEEEEeCCCcEEEEEcC
Q psy13207 122 ATCSS--DQNIKVTRDVMGTRFDIETIGNFED-------HYCTVWRVSW--NIT-GT-IVASSGDDGCVRLWKLK 183 (197)
Q Consensus 122 ~s~~~--d~~i~~~d~~~~~~~~~~~~~~~~~-------h~~~v~~~~~--~p~-~~-~l~~~~~dg~i~iw~~~ 183 (197)
++.-. +++|.+|++... ...+..+.. -...+..+|+ +|. ++ +++....+|.+..|++.
T Consensus 91 as~R~~~~n~l~vf~iDp~----~~~l~~i~~~~~pv~t~~~~pyGlcly~~~~~g~~yafV~~k~G~~~q~~l~ 161 (355)
T 3amr_A 91 ASNRSEGKNTIEIYAIDGK----NGTLQSMTDPDHPIATAINEVYGFTLYHSQKTGKYYAMVTGKEGEFEQYELK 161 (355)
T ss_dssp EEECSTTCCEEEEEEECTT----TCCEEECSCTTSCEECCCSSCCCEEEEECTTTCCEEEEEECSSSEEEEEEEE
T ss_pred EeCCCCCCCeEEEEEECCC----CCceeeccccccCcCCCCCCeeEEEEEecCCCCcEEEEEECCCCeEEEEEEE
Confidence 44444 689999977421 111222211 1145667887 774 44 67778888999999883
No 300
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=82.47 E-value=11 Score=26.65 Aligned_cols=58 Identities=10% Similarity=0.033 Sum_probs=31.9
Q ss_pred CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC-----CcEEEEEcCCCcchhhh
Q psy13207 128 QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD-----GCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 128 ~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~ 191 (197)
..+.+||..+.+ ...+..+.........+.+ ++++++.|+.+ ..+.+||+.+ .+|..+
T Consensus 216 ~~~~~yd~~~~~---W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~-~~W~~~ 278 (306)
T 3ii7_A 216 DNVEYYDIKLNE---WKMVSPMPWKGVTVKCAAV--GSIVYVLAGFQGVGRLGHILEYNTET-DKWVAN 278 (306)
T ss_dssp CCEEEEETTTTE---EEECCCCSCCBSCCEEEEE--TTEEEEEECBCSSSBCCEEEEEETTT-TEEEEE
T ss_pred ceEEEeeCCCCc---EEECCCCCCCccceeEEEE--CCEEEEEeCcCCCeeeeeEEEEcCCC-CeEEeC
Confidence 457888887632 2333222221222222333 67788888754 4688888876 446554
No 301
>2xbg_A YCF48-like protein; photosynthesis, photosystem II, beta-propeller, assembly FAC; 1.50A {Thermosynechococcus elongatus}
Probab=82.24 E-value=12 Score=27.00 Aligned_cols=147 Identities=7% Similarity=0.094 Sum_probs=75.5
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce----eEEE--
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI----SIMY-- 96 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~----~~~~-- 96 (197)
.+...+..+.+.|+ +.+++.+...+..+-.|-. + ..|+... ......+..+.+.+++..++.+ +...
T Consensus 160 ~~~~~~~~~~~~~~--~~~~~~g~~G~~~~S~d~g-G---~tW~~~~-~~~~~~~~~~~~~~~g~~~~~~~~G~~~~s~~ 232 (327)
T 2xbg_A 160 EAIGVMRNLNRSPS--GEYVAVSSRGSFYSTWEPG-Q---TAWEPHN-RTTSRRLHNMGFTPDGRLWMIVNGGKIAFSDP 232 (327)
T ss_dssp SCCCCEEEEEECTT--SCEEEEETTSSEEEEECTT-C---SSCEEEE-CCSSSCEEEEEECTTSCEEEEETTTEEEEEET
T ss_pred CCCcceEEEEEcCC--CcEEEEECCCcEEEEeCCC-C---CceeECC-CCCCCccceeEECCCCCEEEEeCCceEEEecC
Confidence 44557889999997 8777666443333333320 1 1222111 1124567778888887665433 3333
Q ss_pred E-eeE---eccc---CCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEE
Q psy13207 97 E-AHS---INAE---HKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIV 168 (197)
Q Consensus 97 ~-~~~---~~~~---~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 168 (197)
| -.. +... ....+..+.+. +..+ +.++.++.+. +..+.+..+ ..+.........+.++.|.++++ +
T Consensus 233 D~G~tW~~~~~~~~~~~~~~~~v~~~~~~~~--~~~g~~g~i~-~S~DgG~tW--~~~~~~~~~~~~~~~v~~~~~~~-~ 306 (327)
T 2xbg_A 233 DNSENWGELLSPLRRNSVGFLDLAYRTPNEV--WLAGGAGALL-CSQDGGQTW--QQDVDVKKVPSNFYKILFFSPDQ-G 306 (327)
T ss_dssp TEEEEECCCBCTTSSCCSCEEEEEESSSSCE--EEEESTTCEE-EESSTTSSC--EECGGGTTSSSCCCEEEEEETTE-E
T ss_pred CCCCeeEeccCCcccCCcceEEEEecCCCEE--EEEeCCCeEE-EeCCCCccc--EEcCccCCCCCCeEEEEEECCCc-e
Confidence 1 111 1101 22357888887 4444 4455577663 333322222 22221112234567888876555 5
Q ss_pred EEEeCCCcEEEEEc
Q psy13207 169 ASSGDDGCVRLWKL 182 (197)
Q Consensus 169 ~~~~~dg~i~iw~~ 182 (197)
+.++.+|.|.-++-
T Consensus 307 ~~~G~~G~i~~~~~ 320 (327)
T 2xbg_A 307 FILGQKGILLRYVT 320 (327)
T ss_dssp EEECSTTEEEEECC
T ss_pred EEEcCCceEEEEcC
Confidence 56667888776653
No 302
>1kv9_A Type II quinohemoprotein alcohol dehydrogenase; electron transfer, oxidoreductase; HET: PQQ HEM EPE; 1.90A {Pseudomonas putida} SCOP: a.3.1.6 b.70.1.1
Probab=82.05 E-value=4.8 Score=32.46 Aligned_cols=65 Identities=11% Similarity=0.041 Sum_probs=36.1
Q ss_pred cCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCce-ecEEEEEEcc---CCCEEEEEeC------CCcEEEEEcCC
Q psy13207 115 DYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHY-CTVWRVSWNI---TGTIVASSGD------DGCVRLWKLKK 184 (197)
Q Consensus 115 ~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~-~~v~~~~~~p---~~~~l~~~~~------dg~i~iw~~~~ 184 (197)
....+ +.++.|+.|..+|.+++ +.+-.+.... .....+..+| ++ .++.++. +|.|..+|.++
T Consensus 116 ~~~~v--~v~~~dg~l~alD~~tG-----~~~W~~~~~~~~~~~~~~~~P~v~~~-~v~vg~~~~~~~~~g~v~a~D~~t 187 (668)
T 1kv9_A 116 WGDKV--YVGTLDGRLIALDAKTG-----KAIWSQQTTDPAKPYSITGAPRVVKG-KVIIGNGGAEYGVRGFVSAYDADT 187 (668)
T ss_dssp EBTEE--EEECTTSEEEEEETTTC-----CEEEEEECSCTTSSCBCCSCCEEETT-EEEECCBCTTTCCBCEEEEEETTT
T ss_pred ECCEE--EEEcCCCEEEEEECCCC-----CEeeeeccCCCCCcceecCCCEEECC-EEEEeCCCCCcCCCCEEEEEECCC
Confidence 35556 77788999999999873 3332222110 0000011111 34 4444433 58899999988
Q ss_pred Ccc
Q psy13207 185 KRK 187 (197)
Q Consensus 185 ~~~ 187 (197)
++.
T Consensus 188 G~~ 190 (668)
T 1kv9_A 188 GKL 190 (668)
T ss_dssp CCE
T ss_pred CcE
Confidence 775
No 303
>3amr_A 3-phytase; beta-propeller, phytate, MYO-inositol hexasulfate, hydrolase-hydrolase inhibitor complex; HET: IHS; 1.25A {Bacillus subtilis} PDB: 3ams_A* 2poo_A 1poo_A 1qlg_A 1h6l_A 1cvm_A
Probab=80.01 E-value=16 Score=27.07 Aligned_cols=123 Identities=14% Similarity=0.115 Sum_probs=68.1
Q ss_pred cceeEEEE--CCCCCC-cEEEEEeCCCcEEEEEcCCccc-ccceeccceeccCCCeeeEEEccCCCcccceeEEEEeeEe
Q psy13207 26 TSVTDVKF--GPKQLG-LVLATCAADGLVRIYEAPDVMN-LSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSI 101 (197)
Q Consensus 26 ~~v~~~~~--~~~~~~-~~l~s~~~dg~v~iw~~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 101 (197)
..+..+++ +|.. + .+++....+|.+..|++..... ....++ ++.+
T Consensus 128 ~~pyGlcly~~~~~-g~~yafV~~k~G~~~q~~l~~~~~g~~~~~l------------------------------VR~f 176 (355)
T 3amr_A 128 NEVYGFTLYHSQKT-GKYYAMVTGKEGEFEQYELKADKNGYISGKK------------------------------VRAF 176 (355)
T ss_dssp SSCCCEEEEECTTT-CCEEEEEECSSSEEEEEEEEECTTSCEEEEE------------------------------EEEE
T ss_pred CCeeEEEEEecCCC-CcEEEEEECCCCeEEEEEEEeCCCCcccceE------------------------------EEEe
Confidence 45666777 6642 4 3677777889999988843211 011111 2222
Q ss_pred cccCCCceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeec-Cc-eecEEEEEE--ccCCC-EEEEEe-C
Q psy13207 102 NAEHKDLIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE-DH-YCTVWRVSW--NITGT-IVASSG-D 173 (197)
Q Consensus 102 ~~~~~~~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~-~h-~~~v~~~~~--~p~~~-~l~~~~-~ 173 (197)
. ....+..+... ...+ ..+-++.-|..++.+.........+..+. ++ ...+..++. .++++ +|++++ .
T Consensus 177 ~--lgsq~EgcvvDd~~g~L--yv~eEd~GIw~~da~p~~~~~~~~v~~~~~g~l~aDvEGLai~~~~~g~gyLivSsQG 252 (355)
T 3amr_A 177 K--MNSQTEGMAADDEYGRL--YIAEEDEAIWKFSAEPDGGSNGTVIDRADGRHLTRDIEGLTIYYAADGKGYLMASSQG 252 (355)
T ss_dssp E--CSSCEEEEEEETTTTEE--EEEETTTEEEEEECSTTSCSCCEEEEEBSSSSBCSCEEEEEEEECGGGCEEEEEEEGG
T ss_pred c--CCCCcceEEEcCCCCeE--EEecccceEEEEeCCcCCCCCceEEEEecCCccccCcceEEEEecCCCCEEEEEEcCC
Confidence 2 22345566665 3344 67777766666665432111133443332 22 236777877 45555 666666 6
Q ss_pred CCcEEEEEcC
Q psy13207 174 DGCVRLWKLK 183 (197)
Q Consensus 174 dg~i~iw~~~ 183 (197)
+.++.+||..
T Consensus 253 ~~s~~Vydr~ 262 (355)
T 3amr_A 253 NSSYAIYDRQ 262 (355)
T ss_dssp GTEEEEEESS
T ss_pred CCEEEEEECC
Confidence 7799999986
No 304
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=79.21 E-value=16 Score=26.74 Aligned_cols=27 Identities=15% Similarity=0.015 Sum_probs=20.8
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEE
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYE 55 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~ 55 (197)
.....++|.|+ |+++++ ..+|.|++++
T Consensus 29 ~~P~~ia~~pd--G~l~V~-e~~g~I~~~d 55 (354)
T 3a9g_A 29 EVPWSIAPLGG--GRYLVT-ERPGRLVLIS 55 (354)
T ss_dssp SCEEEEEEEET--TEEEEE-ETTTEEEEEC
T ss_pred CCCeEEEEcCC--CeEEEE-eCCCEEEEEe
Confidence 45788999998 875554 5669998887
No 305
>3p5b_L Low density lipoprotein receptor variant; B-propellor, convertase, hydrolase-lipid binding P complex; 3.30A {Homo sapiens} PDB: 3p5c_L
Probab=78.79 E-value=18 Score=26.99 Aligned_cols=153 Identities=9% Similarity=-0.055 Sum_probs=82.3
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-------eEEEE-
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-------SIMYE- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~- 97 (197)
.....+++.+.. ++++++-...+.|.+.++.......... ..-.....++++|.+..+..+ +...+
T Consensus 159 ~~p~glavD~~~-~~lY~~d~~~~~I~~~~~~g~~~~~l~~-----~~~~~P~~iavdp~~g~ly~td~~~~~~I~~~~~ 232 (400)
T 3p5b_L 159 QAPDGLAVDWIH-SNIYWTDSVLGTVSVADTKGVKRKTLFR-----ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 232 (400)
T ss_dssp SCEEEEEEETTT-TEEEEEETTTTEEEEECTTTCSEEEEEE-----CSSCCEEEEEEETTTTEEEEEECSSSCCEEEEET
T ss_pred CCcccEEEEecC-CceEEEECCCCeEEEEeCCCCceEEEEe-----CCCCCcceEEEecccCeEEEEeCCCCCEEEEEeC
Confidence 346678887731 5666666677888888876542211110 112346788888865544221 33333
Q ss_pred ----eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEe
Q psy13207 98 ----AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG 172 (197)
Q Consensus 98 ----~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~ 172 (197)
...+....-...+.|+++ ....++++=...+.|..+|+... ....+............+++. .+.++.+-.
T Consensus 233 dG~~~~~~~~~~l~~P~glavd~~~~~lY~aD~~~~~I~~~d~dG~---~~~~~~~~~~~l~~P~gl~v~-~~~lywtd~ 308 (400)
T 3p5b_L 233 NGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG---NRKTILEDEKRLAHPFSLAVF-EDKVFWTDI 308 (400)
T ss_dssp TSCSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---CCEEEEECSSTTSSEEEEEEE-TTEEEEEES
T ss_pred CCCccEEEEECCCCceEEEEEEeCCCEEEEEECCCCEEEEEeCCCC---ccEEEEeCCCCCCCCEEEEEe-CCEEEEecC
Confidence 222211223566788888 23332244455678888888641 122222211122334566663 445566666
Q ss_pred CCCcEEEEEcCCCcch
Q psy13207 173 DDGCVRLWKLKKKRKK 188 (197)
Q Consensus 173 ~dg~i~iw~~~~~~~~ 188 (197)
..+.|..+|..+++..
T Consensus 309 ~~~~V~~~~~~~G~~~ 324 (400)
T 3p5b_L 309 INEAIFSANRLTGSDV 324 (400)
T ss_dssp SSCSEEEEESSSCCCC
T ss_pred CCCeEEEEEcCCCCce
Confidence 7788988886665543
No 306
>1ijq_A LDL receptor, low-density lipoprotein receptor; beta-propeller, lipid transport; 1.50A {Homo sapiens} SCOP: b.68.5.1 g.3.11.1
Probab=78.33 E-value=16 Score=26.14 Aligned_cols=152 Identities=9% Similarity=-0.063 Sum_probs=82.7
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc-------eeEEEE--
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS-------ISIMYE-- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-- 97 (197)
....+++.+.+ ++++++-...+.|.+.++...... .+. . ........++++|.+..+.. .+...+
T Consensus 78 ~p~glavd~~~-~~ly~~d~~~~~I~~~~~~g~~~~-~~~--~--~~~~~P~~iavdp~~g~ly~~d~~~~~~I~~~~~d 151 (316)
T 1ijq_A 78 APDGLAVDWIH-SNIYWTDSVLGTVSVADTKGVKRK-TLF--R--ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGLN 151 (316)
T ss_dssp CCCEEEEETTT-TEEEEEETTTTEEEEEETTSSSEE-EEE--E--CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CcCEEEEeecC-CeEEEEECCCCEEEEEeCCCCceE-EEE--E--CCCCCcceEEeCCCCCEEEEEccCCCCeEEEEcCC
Confidence 45678887641 556666667788999887643211 110 0 11245678888886554321 133333
Q ss_pred ---eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeC
Q psy13207 98 ---AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGD 173 (197)
Q Consensus 98 ---~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~ 173 (197)
...+....-...+.++++ ....++++-...+.|..+|.... ....+............+++. .+.++.+-..
T Consensus 152 G~~~~~~~~~~~~~P~gla~d~~~~~lY~~D~~~~~I~~~d~dg~---~~~~~~~~~~~~~~P~giav~-~~~ly~~d~~ 227 (316)
T 1ijq_A 152 GVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG---NRKTILEDEKRLAHPFSLAVF-EDKVFWTDII 227 (316)
T ss_dssp SCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEEECTTTTSSEEEEEEE-TTEEEEEETT
T ss_pred CCCeEEEEECCCCCceEEEEeccCCEEEEEECCCCeEEEEecCCC---ceEEEeecCCccCCcEEEEEE-CCEEEEEECC
Confidence 222211223456788888 22332355556678999998641 122222211112234667774 4556666667
Q ss_pred CCcEEEEEcCCCcch
Q psy13207 174 DGCVRLWKLKKKRKK 188 (197)
Q Consensus 174 dg~i~iw~~~~~~~~ 188 (197)
.+.|..++..+++..
T Consensus 228 ~~~V~~~~~~~g~~~ 242 (316)
T 1ijq_A 228 NEAIFSANRLTGSDV 242 (316)
T ss_dssp TTEEEEEETTTCCCC
T ss_pred CCeEEEEeCCCCcce
Confidence 788998887665543
No 307
>3v64_C Agrin; beta propeller, laminin-G, signaling, protein binding; HET: NAG; 2.85A {Rattus norvegicus}
Probab=77.62 E-value=18 Score=26.36 Aligned_cols=149 Identities=5% Similarity=-0.109 Sum_probs=80.9
Q ss_pred ceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccc-------eeEEEE--
Q psy13207 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS-------ISIMYE-- 97 (197)
Q Consensus 27 ~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~~-- 97 (197)
....+++.+.. +.++++-...+.|.+.++....... + .. ..-.....++++|.+..+.. .+..++
T Consensus 117 ~p~glavd~~~-g~ly~~d~~~~~I~~~~~dG~~~~~-l-~~---~~l~~P~~iavdp~~g~ly~td~~~~~~I~r~~~d 190 (349)
T 3v64_C 117 SPGGLAVDWVH-DKLYWTDSGTSRIEVANLDGAHRKV-L-LW---QSLEKPRAIALHPMEGTIYWTDWGNTPRIEASSMD 190 (349)
T ss_dssp CCCEEEEETTT-TEEEEEETTTTEEEEEETTSCSCEE-E-EC---TTCSCEEEEEEETTTTEEEEEECSSSCEEEEEETT
T ss_pred CccEEEEecCC-CeEEEEcCCCCeEEEEcCCCCceEE-E-Ee---CCCCCcceEEEecCcCeEEEeccCCCCEEEEEeCC
Confidence 34677887641 5666666677888888876532110 0 00 11235678888886654421 133333
Q ss_pred ---eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeC
Q psy13207 98 ---AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGD 173 (197)
Q Consensus 98 ---~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~ 173 (197)
...+....-...+.|+++ ....++++-...+.|..+|..... ...+ +.........+++ ..+.+..+-..
T Consensus 191 G~~~~~~~~~~~~~PnGla~d~~~~~lY~aD~~~~~I~~~~~dG~~---~~~~--~~~~~~~P~giav-~~~~ly~td~~ 264 (349)
T 3v64_C 191 GSGRRIIADTHLFWPNGLTIDYAGRRMYWVDAKHHVIERANLDGSH---RKAV--ISQGLPHPFAITV-FEDSLYWTDWH 264 (349)
T ss_dssp SCSCEESCCSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSCS---CEEE--ECSSCSSEEEEEE-ETTEEEEEETT
T ss_pred CCCcEEEEECCCCCcceEEEeCCCCEEEEEECCCCEEEEEeCCCCc---eEEE--EeCCCCCceEEEE-ECCEEEEecCC
Confidence 122211223456788988 233333555567889999876410 1111 1222234566777 35556666667
Q ss_pred CCcEEEEEcCCCcc
Q psy13207 174 DGCVRLWKLKKKRK 187 (197)
Q Consensus 174 dg~i~iw~~~~~~~ 187 (197)
.+.|..++..+++.
T Consensus 265 ~~~V~~~~~~~G~~ 278 (349)
T 3v64_C 265 TKSINSANKFTGKN 278 (349)
T ss_dssp TTEEEEEETTTCCS
T ss_pred CCeEEEEEccCCCc
Confidence 78888887555443
No 308
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=77.15 E-value=37 Score=29.63 Aligned_cols=75 Identities=12% Similarity=-0.031 Sum_probs=47.3
Q ss_pred CCceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccC------CCEEEEEeC-CCcEE
Q psy13207 106 KDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT------GTIVASSGD-DGCVR 178 (197)
Q Consensus 106 ~~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~------~~~l~~~~~-dg~i~ 178 (197)
...|...+.++..+ +.++ .+.+.++++..+. ........ -...|.|+++.|. +++++.|.. |++++
T Consensus 513 ~~~I~~As~n~~~v--vva~-g~~l~~fel~~~~---L~~~~~~~-l~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~ 585 (1158)
T 3ei3_A 513 AKNISVASCNSSQV--VVAV-GRALYYLQIHPQE---LRQISHTE-MEHEVACLDITPLGDSNGLSPLCAIGLWTDISAR 585 (1158)
T ss_dssp CCCCCEEEECSSEE--EEEE-TTEEEEEEEETTE---EEEEEEEE-CSSCEEEEECCCCSSSTTCCSEEEEEETTTTEEE
T ss_pred CCEEEEEEeCCCEE--EEEE-CCEEEEEEeeCCc---eeeecccC-CCCceEEEEeecCCCCcccccEEEEEECCCCEEE
Confidence 34566666665555 3333 5677777775421 11111111 1347999999863 479999996 99999
Q ss_pred EEEcCCCcc
Q psy13207 179 LWKLKKKRK 187 (197)
Q Consensus 179 iw~~~~~~~ 187 (197)
|++++..+.
T Consensus 586 I~sL~~l~~ 594 (1158)
T 3ei3_A 586 ILKLPSFEL 594 (1158)
T ss_dssp EEETTTCCE
T ss_pred EEECCCCCe
Confidence 999986443
No 309
>2xn4_A Kelch-like protein 2; structural protein, cytoskeleton; 1.99A {Homo sapiens}
Probab=76.09 E-value=18 Score=25.44 Aligned_cols=59 Identities=8% Similarity=0.080 Sum_probs=31.4
Q ss_pred CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC-----CcEEEEEcCCCcchhhhh
Q psy13207 128 QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD-----GCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 128 ~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~ 192 (197)
..+.+||..+.+ ...+..+......-..+.+ ++++++.|+.+ ..+.+||+.+ ..|..+.
T Consensus 173 ~~~~~yd~~~~~---W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W~~~~ 236 (302)
T 2xn4_A 173 STVECYNATTNE---WTYIAEMSTRRSGAGVGVL--NNLLYAVGGHDGPLVRKSVEVYDPTT-NAWRQVA 236 (302)
T ss_dssp CCEEEEETTTTE---EEEECCCSSCCBSCEEEEE--TTEEEEECCBSSSSBCCCEEEEETTT-TEEEEEC
T ss_pred cEEEEEeCCCCc---EEECCCCccccccccEEEE--CCEEEEECCCCCCcccceEEEEeCCC-CCEeeCC
Confidence 347788887632 2223222221111122222 67778887764 3688899876 3465543
No 310
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=75.94 E-value=18 Score=25.54 Aligned_cols=65 Identities=12% Similarity=0.076 Sum_probs=34.8
Q ss_pred EEeeCC-----CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC-----CcEEEEEcCCCcchhhh
Q psy13207 122 ATCSSD-----QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD-----GCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 122 ~s~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~ 191 (197)
+.|+.+ ..+.+||..+.+ ...+..+.........+.+ ++++++.|+.+ ..+.+||+.+ .+|..+
T Consensus 220 v~GG~~~~~~~~~v~~yd~~~~~---W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~-~~W~~~ 293 (308)
T 1zgk_A 220 AAGGYDGQDQLNSVERYDVETET---WTFVAPMKHRRSALGITVH--QGRIYVLGGYDGHTFLDSVECYDPDT-DTWSEV 293 (308)
T ss_dssp EECCBCSSSBCCCEEEEETTTTE---EEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSCBCCEEEEEETTT-TEEEEE
T ss_pred EEeCCCCCCccceEEEEeCCCCc---EEECCCCCCCccceEEEEE--CCEEEEEcCcCCCcccceEEEEcCCC-CEEeec
Confidence 555543 568889987632 2223222221111122222 67777887754 4578888876 456654
Q ss_pred h
Q psy13207 192 E 192 (197)
Q Consensus 192 ~ 192 (197)
.
T Consensus 294 ~ 294 (308)
T 1zgk_A 294 T 294 (308)
T ss_dssp E
T ss_pred C
Confidence 3
No 311
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=75.01 E-value=5.5 Score=32.54 Aligned_cols=38 Identities=8% Similarity=0.184 Sum_probs=29.2
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceec
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCL 67 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~ 67 (197)
..|.++.+ + ..++++-+.|+++|+|++.++..+....+
T Consensus 222 ~~Is~~~~--~--~~fLftL~~Dh~LRiWsL~t~~lv~t~DL 259 (729)
T 3f7f_A 222 SVISCKLF--H--ERYLIVLTQNCHLKIWDLTSFTLIQDYDM 259 (729)
T ss_dssp CEEEEEEE--T--TTEEEEEETTCEEEEEETTTTEEEEEEET
T ss_pred ceEEEecc--C--CcEEEEEEcCCeEEEEEcCCCceEEeecc
Confidence 45666655 3 56999999999999999999876655444
No 312
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=73.87 E-value=23 Score=25.84 Aligned_cols=28 Identities=21% Similarity=0.265 Sum_probs=21.4
Q ss_pred ceeEEEECCCCCCc-EEEEEeCCCcEEEEEcC
Q psy13207 27 SVTDVKFGPKQLGL-VLATCAADGLVRIYEAP 57 (197)
Q Consensus 27 ~v~~~~~~~~~~~~-~l~s~~~dg~v~iw~~~ 57 (197)
....|+|.|+ |+ +++ +...|.|++++..
T Consensus 19 ~P~~i~~~pd--G~~l~V-~e~~G~i~~~~~~ 47 (353)
T 2g8s_A 19 HPWALAFLPD--NHGMLI-TLRGGELRHWQAG 47 (353)
T ss_dssp SEEEEEECST--TCCEEE-EETTTEEEEEETT
T ss_pred CcEEEEEcCC--CCEEEE-EeCCceEEEEeCC
Confidence 4678999998 88 554 4567999998853
No 313
>1zgk_A Kelch-like ECH-associated protein 1; beta-propeller, kelch repeat motif, protein binding; HET: MSE; 1.35A {Homo sapiens} SCOP: b.68.11.1 PDB: 2flu_X 1u6d_X 1x2j_A 1x2r_A 2dyh_A 2z32_A 3ade_A
Probab=73.05 E-value=22 Score=25.12 Aligned_cols=59 Identities=10% Similarity=0.011 Sum_probs=31.7
Q ss_pred CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC-----CcEEEEEcCCCcchhhhh
Q psy13207 128 QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD-----GCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 128 ~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~ 192 (197)
..+.+||..+.+ ...+..+......-..+.+ ++++++.|+.+ ..+.+||+.+ ..|..+.
T Consensus 184 ~~~~~yd~~~~~---W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~v~~yd~~~-~~W~~~~ 247 (308)
T 1zgk_A 184 NSAECYYPERNE---WRMITAMNTIRSGAGVCVL--HNCIYAAGGYDGQDQLNSVERYDVET-ETWTFVA 247 (308)
T ss_dssp CCEEEEETTTTE---EEECCCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTT-TEEEECC
T ss_pred ceEEEEeCCCCe---EeeCCCCCCccccceEEEE--CCEEEEEeCCCCCCccceEEEEeCCC-CcEEECC
Confidence 457888887632 2222222211111122223 67777877764 4688999876 3465543
No 314
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=71.10 E-value=25 Score=24.93 Aligned_cols=57 Identities=14% Similarity=0.156 Sum_probs=29.6
Q ss_pred eEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC--------------CcEEEEEcCCCcchhhh
Q psy13207 129 NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD--------------GCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 129 ~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d--------------g~i~iw~~~~~~~~~~~ 191 (197)
.+.+||..+.+ ...+..+.........+. .++++++.|+.+ ..+.+||+.+ .+|..+
T Consensus 223 ~~~~yd~~~~~---W~~~~~~p~~r~~~~~~~--~~~~i~v~GG~~~~~~~~~~~~~~~~~~v~~yd~~~-~~W~~~ 293 (318)
T 2woz_A 223 SVEAFDLKTNK---WEVMTEFPQERSSISLVS--LAGSLYAIGGFAMIQLESKEFAPTEVNDIWKYEDDK-KEWAGM 293 (318)
T ss_dssp EEEEEETTTCC---EEECCCCSSCCBSCEEEE--ETTEEEEECCBCCBC----CCBCCBCCCEEEEETTT-TEEEEE
T ss_pred eEEEEECCCCe---EEECCCCCCcccceEEEE--ECCEEEEECCeeccCCCCceeccceeeeEEEEeCCC-CEehhh
Confidence 46678887632 233322222111112222 257777777754 3578888876 446544
No 315
>4fhn_B Nucleoporin NUP120; protein complex,structural protein,nuclear pore complex,mRNA transport,protein transport, WD repeat; 6.99A {Schizosaccharomyces pombe 972h-}
Probab=70.10 E-value=1.8 Score=37.38 Aligned_cols=36 Identities=11% Similarity=0.062 Sum_probs=28.9
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhh
Q psy13207 155 TVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190 (197)
Q Consensus 155 ~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~ 190 (197)
.+.+++..++..++++-+.|+++++|++.+++++..
T Consensus 239 ~~vs~~~~~~~~~lftL~~D~~LRiWsl~t~~~v~t 274 (1139)
T 4fhn_B 239 TIISMIFLSTYNVLVMLSLDYKLKVLDLSTNQCVET 274 (1139)
T ss_dssp CBSCCEEETTTTEEEEEBTTCEEEEEETTTTEEEEE
T ss_pred eeEEeeccCCccEEEEEeCCCEEEEEECCCCCeEEe
Confidence 344556667888999999999999999998876544
No 316
>3sov_A LRP-6, low-density lipoprotein receptor-related protein; beta propeller, protein binding-antagonist complex; HET: NAG FUC; 1.27A {Homo sapiens} PDB: 3soq_A* 3sob_B
Probab=70.09 E-value=28 Score=25.06 Aligned_cols=149 Identities=4% Similarity=-0.151 Sum_probs=79.2
Q ss_pred eeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-------eEEEE---
Q psy13207 28 VTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-------SIMYE--- 97 (197)
Q Consensus 28 v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~--- 97 (197)
...+++.+.. +.++++-...+.|.+.++...... .+. . ........++++|.+..+..+ +...+
T Consensus 81 p~glavd~~~-g~ly~~d~~~~~I~~~~~dG~~~~-~l~-~---~~~~~P~giavdp~~g~ly~td~~~~~~I~r~~~dG 154 (318)
T 3sov_A 81 PDGLACDWLG-EKLYWTDSETNRIEVSNLDGSLRK-VLF-W---QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDG 154 (318)
T ss_dssp CCEEEEETTT-TEEEEEETTTTEEEEEETTSCSCE-EEE-C---SSCSSEEEEEEEGGGTEEEEEECSSSCEEEEEETTS
T ss_pred ccEEEEEcCC-CeEEEEECCCCEEEEEECCCCcEE-EEE-e---CCCCCccEEEEeCCCCEEEEEecCCCCEEEEEEcCC
Confidence 4567777641 566666667788888887643211 000 0 112345778888765443211 23333
Q ss_pred --eeEecccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC
Q psy13207 98 --AHSINAEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD 174 (197)
Q Consensus 98 --~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d 174 (197)
...+-...-...+.|++++ ...++++=+..+.|..+|.... ....+. .+.......+++. .+.++.+-...
T Consensus 155 ~~~~~~~~~~l~~Pnglavd~~~~~lY~aD~~~~~I~~~d~dG~---~~~~~~--~~~~~~P~glav~-~~~lywtd~~~ 228 (318)
T 3sov_A 155 SSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGT---NRQAVV--KGSLPHPFALTLF-EDILYWTDWST 228 (318)
T ss_dssp CSCEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEE--CSCCSCEEEEEEE-TTEEEEEETTT
T ss_pred CCeEEEEECCCCCccEEEEeccCCEEEEEECCCCEEEEEcCCCC---ceEEEe--cCCCCCceEEEEe-CCEEEEEecCC
Confidence 1122102234457888882 3332355556788888888631 012221 2223344667765 34455555677
Q ss_pred CcEEEEEcCCCcch
Q psy13207 175 GCVRLWKLKKKRKK 188 (197)
Q Consensus 175 g~i~iw~~~~~~~~ 188 (197)
+.|..++..+++..
T Consensus 229 ~~V~~~~~~~G~~~ 242 (318)
T 3sov_A 229 HSILACNKYTGEGL 242 (318)
T ss_dssp TEEEEEETTTCCSC
T ss_pred CeEEEEECCCCCce
Confidence 88998988666543
No 317
>2wg3_C Hedgehog-interacting protein; lipoprotein, development, membrane, secreted, protease, PALM hydrolase, developmental protein, autocatalytic cleavage; HET: NAG; 2.60A {Homo sapiens} PDB: 2wg4_B 2wfx_B 2wft_A 3ho3_A 3ho4_A 3ho5_A
Probab=69.48 E-value=36 Score=26.15 Aligned_cols=30 Identities=17% Similarity=0.183 Sum_probs=22.0
Q ss_pred cceeEEEECCCCCCc-EEEEEeCCCcEEEEEcC
Q psy13207 26 TSVTDVKFGPKQLGL-VLATCAADGLVRIYEAP 57 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~-~l~s~~~dg~v~iw~~~ 57 (197)
..-+.|+|.|+ |. .|+.+...|.|++++..
T Consensus 14 ~~P~~~a~~pd--G~~rl~V~er~G~i~~~~~~ 44 (463)
T 2wg3_C 14 RQPVGALHSGD--GSQRLFILEKEGYVKILTPE 44 (463)
T ss_dssp SSEEEEECCSS--SSCCEEEEETTTEEEEECTT
T ss_pred CCceEEEECCC--CCeEEEEEeCCceEEEEeCC
Confidence 34678999998 75 45555778999999753
No 318
>3sre_A PON1, serum paraoxonase; directed evolution, 6-blades-propeller fold, hydrolase; HET: LMT; 1.99A {Artificial gene} PDB: 1v04_A* 3srg_A*
Probab=69.48 E-value=31 Score=25.45 Aligned_cols=142 Identities=9% Similarity=-0.004 Sum_probs=74.6
Q ss_pred ceeEEEECCCCCC--cEEEEEeC--CCcEEEEEcCCcccccceeccceecc--CCCeeeEEEccCCCcccce--------
Q psy13207 27 SVTDVKFGPKQLG--LVLATCAA--DGLVRIYEAPDVMNLSQWCLQHEVAC--PTLASCLTWNHSFSRFNSI-------- 92 (197)
Q Consensus 27 ~v~~~~~~~~~~~--~~l~s~~~--dg~v~iw~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~-------- 92 (197)
....+.+.++.++ .++++-.. +.++.+|++...... ..+...+.+ -.....+...++|.++++.
T Consensus 113 ~PhGi~~~~d~dg~~~L~Vvnh~~~~s~ielf~~d~~~~~--~~~~~~~~g~~~~~pND~~v~~~G~fyvt~~~~ftd~~ 190 (355)
T 3sre_A 113 NPHGISTFIDDDNTVYLLVVNHPGSSSTVEVFKFQEEEKS--LLHLKTIRHKLLPSVNDIVAVGPEHFYATNDHYFIDPY 190 (355)
T ss_dssp CEEEEEEEECTTCCEEEEEEECSTTCCEEEEEEEETTTTE--EEEEEEECCTTCSSEEEEEEEETTEEEEEESCSCSSHH
T ss_pred eeeeeEEEECCCCcEEEEEEECCCCCCeEEEEEEECCCCE--EEEEeccccCCCCCCceEEEeCCCCEEecCCcEeCCcc
Confidence 4555665442113 23333322 467778877643221 122333333 3567888999988743221
Q ss_pred ------------eEEEE-----eeEecccCCCceeEEEEcCCC-eEEEEeeCCCeEEEEEccCCcccceeeeeeecCcee
Q psy13207 93 ------------SIMYE-----AHSINAEHKDLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC 154 (197)
Q Consensus 93 ------------~~~~~-----~~~~~~~~~~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~ 154 (197)
-.+|. +..+. ..-...+.++|+++. .++++-+..+.|..|++.............+ ..
T Consensus 191 ~~~~e~~~~~~~g~vyr~d~~~~~~~~-~~l~~pNGia~spDg~~lYvadt~~~~I~~~~~~~~g~l~~~~~~~~---~g 266 (355)
T 3sre_A 191 LKSWEMHLGLAWSFVTYYSPNDVRVVA-EGFDFANGINISPDGKYVYIAELLAHKIHVYEKHANWTLTPLRVLSF---DT 266 (355)
T ss_dssp HHHHHHHTTCCCEEEEEECTTCCEEEE-EEESSEEEEEECTTSSEEEEEEGGGTEEEEEEECTTSCEEEEEEEEC---SS
T ss_pred cccchhhccCCccEEEEEECCeEEEee-cCCcccCcceECCCCCEEEEEeCCCCeEEEEEECCCCcEecCEEEeC---CC
Confidence 13333 22222 122346889999554 3335556678999999863211111111122 34
Q ss_pred cEEEEEEcc-CCCEEEEEeCC
Q psy13207 155 TVWRVSWNI-TGTIVASSGDD 174 (197)
Q Consensus 155 ~v~~~~~~p-~~~~l~~~~~d 174 (197)
..-.+++.+ +|++.+++..+
T Consensus 267 ~PDGi~vD~e~G~lwva~~~~ 287 (355)
T 3sre_A 267 LVDNISVDPVTGDLWVGCHPN 287 (355)
T ss_dssp EEEEEEECTTTCCEEEEEESC
T ss_pred CCceEEEeCCCCcEEEEecCC
Confidence 567789999 59887766533
No 319
>1tl2_A L10, protein (tachylectin-2); animal lectin, horseshoe CRAB, N-acetylglucosamine, beta- propeller, sugar binding protein; HET: NDG; 2.00A {Tachypleus tridentatus} SCOP: b.67.1.1 PDB: 3kif_A* 3kih_A*
Probab=68.59 E-value=10 Score=26.23 Aligned_cols=71 Identities=10% Similarity=-0.063 Sum_probs=38.4
Q ss_pred ceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcc--cce--eeeeeecCceecEEEEEEccCCCEEEEEeCCCcEEEEEcC
Q psy13207 108 LIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTR--FDI--ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183 (197)
Q Consensus 108 ~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~--~~~--~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~ 183 (197)
.+..++|+|+..+.+. .+|.+.-.+..+... +-. ..+-.. +-. .-.++.|.|+|.+.++ .||.|+-++..
T Consensus 42 ~~~~laf~P~G~LYaV--~~G~Ly~~~~~t~~~~~W~~s~t~IG~~-Gw~-~F~a~~fD~~G~LYav--~dG~iyr~~pP 115 (236)
T 1tl2_A 42 NFKFLFLSPGGELYGV--LNDKIYKGTPPTHDNDNWMGRAKKIGNG-GWN-QFQFLFFDPNGYLYAV--SKDKLYKASPP 115 (236)
T ss_dssp TCSEEEECTTSCEEEE--ETTEEEEESCCCSTTCCHHHHCEEEECS-CGG-GCSEEEECTTSCEEEE--ETTEEEEESCC
T ss_pred cceeEEECCCccEEEE--eCCeEEEECCCCCCcccccccccEeccc-ccc-cceEEEECCCCCEEEe--CCCEEEEeCCC
Confidence 4567777755443344 667665555432110 000 111000 111 1367899999987776 56988878764
Q ss_pred C
Q psy13207 184 K 184 (197)
Q Consensus 184 ~ 184 (197)
+
T Consensus 116 ~ 116 (236)
T 1tl2_A 116 Q 116 (236)
T ss_dssp C
T ss_pred c
Confidence 3
No 320
>1w6s_A Methanol dehydrogenase subunit 1; anisotropic, electron transfer, oxidoreductase, calcium- binding, methanol utilization, PQQ; HET: PQQ; 1.2A {Methylobacterium extorquens} SCOP: b.70.1.1 PDB: 1h4i_A* 1h4j_A* 2d0v_A* 1lrw_A*
Probab=68.02 E-value=32 Score=27.46 Aligned_cols=59 Identities=19% Similarity=0.173 Sum_probs=33.5
Q ss_pred EEeeCCCeEEEEEccCCcccceeeeeeec--Cce--ecEE-EEEEccCCCEEEEEe------CCCcEEEEEcCCCcc
Q psy13207 122 ATCSSDQNIKVTRDVMGTRFDIETIGNFE--DHY--CTVW-RVSWNITGTIVASSG------DDGCVRLWKLKKKRK 187 (197)
Q Consensus 122 ~s~~~d~~i~~~d~~~~~~~~~~~~~~~~--~h~--~~v~-~~~~~p~~~~l~~~~------~dg~i~iw~~~~~~~ 187 (197)
+.++.|+.+..+|.+++ +.+-... .+. ..+. ...+ .++ .++.++ .+|.|+.+|.++++.
T Consensus 125 ~v~t~dg~l~AlDa~TG-----~~~W~~~~~~~~~~~~~~ssP~v-~~g-~V~vg~~g~e~g~~g~v~A~D~~TG~~ 194 (599)
T 1w6s_A 125 LKTQLDGNVAALNAETG-----ETVWKVENSDIKVGSTLTIAPYV-VKD-KVIIGSSGAELGVRGYLTAYDVKTGEQ 194 (599)
T ss_dssp EEECTTSEEEEEETTTC-----CEEEEEECCCGGGTCBCCSCCEE-ETT-EEEECCBCGGGTCCCEEEEEETTTCCE
T ss_pred EEEcCCCEEEEEECCCC-----CEEEeecCCCCCccceeecCCEE-ECC-EEEEEecccccCCCCeEEEEECCCCcE
Confidence 77788999999998774 3322211 110 0111 0111 144 455544 378999999998764
No 321
>3m0c_C LDL receptor, low-density lipoprotein receptor; protein complex, beta propeller, cholesterol clearance, PCSK autocatalytic cleavage; 7.01A {Homo sapiens}
Probab=67.09 E-value=54 Score=27.24 Aligned_cols=152 Identities=9% Similarity=-0.055 Sum_probs=79.3
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce-------eEEEE-
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI-------SIMYE- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-------~~~~~- 97 (197)
.....|++.+.+ ++++++-...+.|.+.++...... .+. . ..-.....|+++|.+..|..+ |...+
T Consensus 471 ~~P~GLAvD~~~-~~LY~tD~~~~~I~v~~ldG~~~~-~l~-~---~~l~~P~gIaVDp~~g~LYwtD~g~~~~I~~~~~ 544 (791)
T 3m0c_C 471 QAPDGLAVDWIH-SNIYWTDSVLGTVSVADTKGVKRK-TLF-R---ENGSKPRAIVVDPVHGFMYWTDWGTPAKIKKGGL 544 (791)
T ss_dssp SCCCEEEEETTT-TEEEEEETTTTEEEEEETTSSSEE-EEE-E---CTTCCEEEEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred CCcceeeeeecC-CcEEEEecCCCeEEEEeCCCCeEE-EEE-e---CCCCCcceEEEecCCCCEEEecCCCCCeEEEEec
Confidence 345678887751 456666677788988888754311 110 0 112356788888875543221 33333
Q ss_pred ----eeEecccCCCceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEe
Q psy13207 98 ----AHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG 172 (197)
Q Consensus 98 ----~~~~~~~~~~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~ 172 (197)
...+....-...+.|+++ ....++++=.....|..+++... ....+..-.........|++. .+++.++-.
T Consensus 545 dG~~~~~lv~~~l~~P~GLavD~~~~~LYwaD~~~~~I~~~d~dG~---~~~~v~~~~~~l~~P~glav~-~~~lYwtD~ 620 (791)
T 3m0c_C 545 NGVDIYSLVTENIQWPNGITLDLLSGRLYWVDSKLHSISSIDVNGG---NRKTILEDEKRLAHPFSLAVF-EDKVFWTDI 620 (791)
T ss_dssp TSCCEEEEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEETTSC---SCEEEEECTTTTSSEEEEEEE-TTEEEEEET
T ss_pred CCCceEEEEeCCCCCceEEEEecCCCeEEEEeCCCCcEEEEecCCC---ceEEEecCCCccCCCCEEEEe-CCEEEEEEC
Confidence 222221233567788887 23322244445678888887541 112221111112233456664 234445555
Q ss_pred CCCcEEEEEcCCCcc
Q psy13207 173 DDGCVRLWKLKKKRK 187 (197)
Q Consensus 173 ~dg~i~iw~~~~~~~ 187 (197)
..+.|...|..+++.
T Consensus 621 ~~~~I~~~dk~tG~~ 635 (791)
T 3m0c_C 621 INEAIFSANRLTGSD 635 (791)
T ss_dssp TTTEEEEEETTTCCC
T ss_pred CCCEEEEEeCCCCcc
Confidence 667788887665543
No 322
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=66.93 E-value=15 Score=26.93 Aligned_cols=24 Identities=8% Similarity=0.110 Sum_probs=19.4
Q ss_pred CcEEEEEeCCCcEEEEEcCCcccc
Q psy13207 39 GLVLATCAADGLVRIYEAPDVMNL 62 (197)
Q Consensus 39 ~~~l~s~~~dg~v~iw~~~~~~~~ 62 (197)
+..++.++.||.|.-.|..+++.+
T Consensus 10 ~~~V~v~t~dG~l~Ald~~tG~~~ 33 (339)
T 2be1_A 10 SDILIAADVEGGLHAVDRRNGHII 33 (339)
T ss_dssp EEEEEEEETTSCEEEEETTTTEEE
T ss_pred CCEEEEEeCCCeEEEEECCCCcEE
Confidence 347888899999999998887643
No 323
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=65.05 E-value=52 Score=26.33 Aligned_cols=150 Identities=9% Similarity=-0.030 Sum_probs=75.6
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceecc-CCCeeeEEEccCCCcccce------eEEEE
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC-PTLASCLTWNHSFSRFNSI------SIMYE 97 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~-~~~~~~~~~~~~~~~~~~~------~~~~~ 97 (197)
-....+++|++.+ +..+.+=...+.|..+++....... ..+.. -.....+++++.+..+..+ +.+.+
T Consensus 39 ~~~~~~ld~~~~~-~~ly~sD~~~~~I~r~~~~g~~~~~-----~v~~~~~~~P~GlAvD~~~~~ly~~d~~~~~I~v~~ 112 (619)
T 3s94_A 39 LEDAAAVDFVFSH-GLIYWSDVSEEAIKRTEFNKTESVQ-----NVVVSGLLSPDGLACDWLGEKLYWTDSETNRIEVSN 112 (619)
T ss_dssp CSCEEEEEEETTT-TEEEEEETTTTEEEEEEC-----CE-----EEECSSCSCEEEEEEETTTTEEEEEETTTTEEEEEE
T ss_pred CCceEEEEEEeCC-CEEEEEECCCCeEEEEEccCCCceE-----EEEeCCCCCcCeEEEEecCCEEEEEeCCCCEEEEEE
Confidence 3457789999862 4555555556788888876542110 01111 2456788888865544322 44444
Q ss_pred -----eeEecccCCCceeEEEEcC-CCeEEEEe-eCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEE
Q psy13207 98 -----AHSINAEHKDLIHDVAYDY-YGLRMATC-SSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVAS 170 (197)
Q Consensus 98 -----~~~~~~~~~~~i~~~~~~~-~~~~~~s~-~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~ 170 (197)
...+....-...+.|++.+ ...++++- +..+.|...++... .........-...+.+++++++..|+.
T Consensus 113 ~dG~~~~~l~~~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~dG~-----~~~~l~~~~~~~P~Glald~~~~~LY~ 187 (619)
T 3s94_A 113 LDGSLRKVLFWQELDQPRAIALDPSSGFMYWTDWGEVPKIERAGMDGS-----SRFIIINSEIYWPNGLTLDYEEQKLYW 187 (619)
T ss_dssp TTSCSCEEEECSSCSCCCCEEEETTTTEEEEEECSSSCEEEEEETTSC-----SCEEEECSSCSSEEEEEEETTTTEEEE
T ss_pred CCCCCEEEEEeCCCCCCceEEEecCCCeEEEeccCCCCEEEEEECCCC-----ceEEEEeCCCCCCcEEEEEccCCEEEE
Confidence 1112112233455677752 22222332 22345555555421 111111122345688999987555554
Q ss_pred E-eCCCcEEEEEcCCC
Q psy13207 171 S-GDDGCVRLWKLKKK 185 (197)
Q Consensus 171 ~-~~dg~i~iw~~~~~ 185 (197)
+ +..+.|...++...
T Consensus 188 aD~~~~~I~~~~~dG~ 203 (619)
T 3s94_A 188 ADAKLNFIHKSNLDGT 203 (619)
T ss_dssp EETTTCCEEEESSSCC
T ss_pred EeCCCCeEEEecCCCC
Confidence 4 45678888887643
No 324
>3f7f_A Nucleoporin NUP120; nuclear pore complex, macromolecular assembly, membrane coat, nucleocytoplasmic transport, beta-propeller; 2.60A {Saccharomyces cerevisiae} PDB: 3h7n_A 3hxr_A
Probab=64.33 E-value=8.1 Score=31.59 Aligned_cols=35 Identities=6% Similarity=0.096 Sum_probs=26.9
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhh
Q psy13207 155 TVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 155 ~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~ 191 (197)
.|.++.+ +..++++-+.|.++|+|++++++.....
T Consensus 223 ~Is~~~~--~~~fLftL~~Dh~LRiWsL~t~~lv~t~ 257 (729)
T 3f7f_A 223 VISCKLF--HERYLIVLTQNCHLKIWDLTSFTLIQDY 257 (729)
T ss_dssp EEEEEEE--TTTEEEEEETTCEEEEEETTTTEEEEEE
T ss_pred eEEEecc--CCcEEEEEEcCCeEEEEEcCCCceEEee
Confidence 3554444 4789999999999999999998755443
No 325
>1cru_A Protein (soluble quinoprotein glucose dehydrogena; beta-propeller, superbarrel; HET: PQQ; 1.50A {Acinetobacter calcoaceticus} SCOP: b.68.2.1 PDB: 1c9u_A* 1cq1_A* 1qbi_A
Probab=63.86 E-value=42 Score=25.62 Aligned_cols=38 Identities=16% Similarity=0.037 Sum_probs=26.9
Q ss_pred ecEEEEEEccCCC-EEEEEeCCCcEE------EEEcCCCcchhhh
Q psy13207 154 CTVWRVSWNITGT-IVASSGDDGCVR------LWKLKKKRKKKKE 191 (197)
Q Consensus 154 ~~v~~~~~~p~~~-~l~~~~~dg~i~------iw~~~~~~~~~~~ 191 (197)
..+..+++.|||. +.++....|.+. +|.+.....+.++
T Consensus 405 ~R~~dv~~gpDG~~Lyv~~d~~G~i~~~~~~~~~~~~~~~~i~~~ 449 (454)
T 1cru_A 405 NRYRDVIASPDGNVLYVLTDTAGNVQKDDGSVTNTLENPGSLIKF 449 (454)
T ss_dssp SCEEEEEECTTSSCEEEEECSSCCEECTTSCEECCCSSTTCEEEE
T ss_pred CCceeEEECCCCCEEEEEECCCCCCccCCCceeEeccCCCceEEE
Confidence 5889999999997 666655566655 6777666655443
No 326
>3ii7_A Kelch-like protein 7; protein-binding, kelch-repeat, structural genomics, structur genomics consortium, SGC, kelch repeat, nucleus, protein BI; 1.63A {Homo sapiens}
Probab=63.05 E-value=36 Score=23.84 Aligned_cols=59 Identities=15% Similarity=0.072 Sum_probs=30.8
Q ss_pred CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC-----CcEEEEEcCCCcchhhhh
Q psy13207 128 QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD-----GCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 128 ~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~ 192 (197)
..+.+||..+.+ ...+..+......-..+.+ ++++++.|+.+ ..+.+||+.+ ..|..+.
T Consensus 169 ~~~~~yd~~~~~---W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~~~~yd~~~-~~W~~~~ 232 (306)
T 3ii7_A 169 NSCEVYDPATET---WTELCPMIEARKNHGLVFV--KDKIFAVGGQNGLGGLDNVEYYDIKL-NEWKMVS 232 (306)
T ss_dssp CCEEEEETTTTE---EEEECCCSSCCBSCEEEEE--TTEEEEECCEETTEEBCCEEEEETTT-TEEEECC
T ss_pred ceEEEeCCCCCe---EEECCCccchhhcceEEEE--CCEEEEEeCCCCCCCCceEEEeeCCC-CcEEECC
Confidence 447788887632 2333222221111122222 67777777654 3578888876 3465543
No 327
>3s94_A LRP-6, low-density lipoprotein receptor-related protein; WNT, LDL receptor-like protein, dickko YWTD B-propeller, signaling protein; HET: NAG; 2.80A {Homo sapiens} PDB: 4dg6_A*
Probab=62.93 E-value=57 Score=26.09 Aligned_cols=151 Identities=5% Similarity=-0.129 Sum_probs=78.5
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCccc-ce----eEEEE---
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFN-SI----SIMYE--- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~-~~----~~~~~--- 97 (197)
.....+++.+.+ ++++++-...+.|.+.++...... .+. . ..-.....|+++|.+..+. +. -+++.
T Consensus 84 ~~P~GlAvD~~~-~~ly~~d~~~~~I~v~~~dG~~~~-~l~-~---~~l~~P~~Iavdp~~g~ly~tD~g~~~~I~r~~~ 157 (619)
T 3s94_A 84 LSPDGLACDWLG-EKLYWTDSETNRIEVSNLDGSLRK-VLF-W---QELDQPRAIALDPSSGFMYWTDWGEVPKIERAGM 157 (619)
T ss_dssp SCEEEEEEETTT-TEEEEEETTTTEEEEEETTSCSCE-EEE-C---SSCSCCCCEEEETTTTEEEEEECSSSCEEEEEET
T ss_pred CCcCeEEEEecC-CEEEEEeCCCCEEEEEECCCCCEE-EEE-e---CCCCCCceEEEecCCCeEEEeccCCCCEEEEEEC
Confidence 457788888851 556666667789999998754211 110 0 1123466788888654432 21 23333
Q ss_pred ----eeEecccCCCceeEEEEcC-CCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEe
Q psy13207 98 ----AHSINAEHKDLIHDVAYDY-YGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG 172 (197)
Q Consensus 98 ----~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~ 172 (197)
...+-.......+.|++++ ...++++=...+.|..+|..... ...+ ..+.......+++..+ .+..+-.
T Consensus 158 dG~~~~~l~~~~~~~P~Glald~~~~~LY~aD~~~~~I~~~~~dG~~---~~~~--~~~~~~~P~gi~~~~~-~ly~td~ 231 (619)
T 3s94_A 158 DGSSRFIIINSEIYWPNGLTLDYEEQKLYWADAKLNFIHKSNLDGTN---RQAV--VKGSLPHPFALTLFED-ILYWTDW 231 (619)
T ss_dssp TSCSCEEEECSSCSSEEEEEEETTTTEEEEEETTTCCEEEESSSCCE---EC-----------CCCEEESSS-EEEEECT
T ss_pred CCCceEEEEeCCCCCCcEEEEEccCCEEEEEeCCCCeEEEecCCCCc---cEEE--EeCCCCCceEEEEeCC-EEEEecC
Confidence 1122112334567788872 22222444456778888775310 1111 1111122345677655 4445555
Q ss_pred CCCcEEEEEcCCCcch
Q psy13207 173 DDGCVRLWKLKKKRKK 188 (197)
Q Consensus 173 ~dg~i~iw~~~~~~~~ 188 (197)
..+.|...|..+++..
T Consensus 232 ~~~~V~~~d~~tg~~~ 247 (619)
T 3s94_A 232 STHSILACNKYTGEGL 247 (619)
T ss_dssp TTCSEEEEESSSCCCC
T ss_pred CCCEEEEEECCCCccc
Confidence 6788988888766543
No 328
>2uvk_A YJHT; unknown function, hypothetical protein, sialic acid metabolism, kelch repeat, beta-propeller; HET: MSE; 1.50A {Escherichia coli}
Probab=60.95 E-value=43 Score=24.06 Aligned_cols=60 Identities=10% Similarity=0.094 Sum_probs=29.6
Q ss_pred eEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC------cEEEEEcCCCcchhhhhh
Q psy13207 129 NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG------CVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 129 ~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg------~i~iw~~~~~~~~~~~~~ 193 (197)
.+.+||..+.+ ...+..+......-.++ ..++++++.|+.++ .+.++++++++..+..++
T Consensus 286 ~~~~yd~~~~~---W~~~~~~p~~r~~~~~~--~~~~~i~v~GG~~~~~~~~~~v~~l~~~~~~~~~~~~~ 351 (357)
T 2uvk_A 286 STDIHLWHNGK---WDKSGELSQGRAYGVSL--PWNNSLLIIGGETAGGKAVTDSVLITVKDNKVTVQNLE 351 (357)
T ss_dssp CCEEEECC------CEEEEECSSCCBSSEEE--EETTEEEEEEEECGGGCEEEEEEEEEC-CCSCEEEC--
T ss_pred eEEEEecCCCc---eeeCCCCCCCcccceeE--EeCCEEEEEeeeCCCCCEeeeEEEEEEcCcEeEeeecc
Confidence 46788887632 33333333222221222 23678888888653 355668887665544443
No 329
>1bpo_A Protein (clathrin); clathrin endocytosis beta-propeller coated-PITS, membrane PR; 2.60A {Rattus norvegicus} SCOP: a.118.1.4 b.69.6.1
Probab=58.04 E-value=64 Score=25.05 Aligned_cols=157 Identities=11% Similarity=0.036 Sum_probs=84.5
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcc-cccceeccceeccCCCeeeEEEccCCCccc------------ce
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVM-NLSQWCLQHEVACPTLASCLTWNHSFSRFN------------SI 92 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~~ 92 (197)
..|.--+|-.+ . .|+-.+ +..|+-|++.... ..+.+.....+. ...|....-+++.++++ ..
T Consensus 106 e~VvfWkWis~--~-~l~lVT-~taVyHWsi~~~s~P~kvFdR~~~L~-~~QIInY~~d~~~kW~~l~GI~~~~~~v~G~ 180 (494)
T 1bpo_A 106 DDVTFWKWISL--N-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLA-GCQIINYRTDAKQKWLLLTGISAQQNRVVGA 180 (494)
T ss_dssp SCCCEEEEEET--T-EEEEEC-SSEEEEEESSSSCCCEEEEECCGGGT-TCEEEEEEECTTSSEEEEEEEEEETTEEEEE
T ss_pred CCceEEEecCC--C-eEEEEc-CCeeEEecccCCCCchhheecchhcc-cceEEEEEECCCCCeEEEEeecccCCcccce
Confidence 45666667543 2 343333 3578888886432 222233333332 44555556666666643 22
Q ss_pred eEEEE-----eeEecccCCCceeEEEEcC-----CCeEEEEee-CCCeEEEEEccCC----cccceeeeeeec---Ccee
Q psy13207 93 SIMYE-----AHSINAEHKDLIHDVAYDY-----YGLRMATCS-SDQNIKVTRDVMG----TRFDIETIGNFE---DHYC 154 (197)
Q Consensus 93 ~~~~~-----~~~~~~~~~~~i~~~~~~~-----~~~~~~s~~-~d~~i~~~d~~~~----~~~~~~~~~~~~---~h~~ 154 (197)
+.+|. -..+. +|-.....+...+ ..+.|+.-. ..+.+++.++... ..+..+.+..+. .-.+
T Consensus 181 mQLYS~er~~sQ~ie-Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhi~Ei~~~~~~~~~f~kk~vdv~fppe~~~D 259 (494)
T 1bpo_A 181 MQLYSVDRKVSQPIE-GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQND 259 (494)
T ss_dssp EEEEESTTCCEEEEC-CSEEEEEEEECTTCSSEEEEEEEEECSTTCCEEEEEECSCCCTTCCCCCCEEEECCCCTTSTTC
T ss_pred EEEeeccccccchhe-eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCccCCCCccceeeeeeCCcccccC
Confidence 56676 33344 5655544444441 123122221 1278889888542 111112111111 1133
Q ss_pred cEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 155 TVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 155 ~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
-..++..++....+..-+.-|.+++||+.++..+
T Consensus 260 FPvamqvs~kygviyviTK~G~i~lyDleTgt~i 293 (494)
T 1bpo_A 260 FPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 293 (494)
T ss_dssp CEEEEEEETTTTEEEEEETTSEEEEEETTTCCEE
T ss_pred ceeEEEecccCCEEEEEecCceEEEEecccceee
Confidence 3456888888788888899999999999987654
No 330
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=57.73 E-value=72 Score=25.58 Aligned_cols=147 Identities=6% Similarity=-0.129 Sum_probs=80.7
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce------eEEEE--
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI------SIMYE-- 97 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------~~~~~-- 97 (197)
..+.+++|++.. +..+.+-..++.|..+++.......... ........+++.+.+..|..+ +.+.+
T Consensus 37 ~~~~~l~~d~~~-~~lywtD~~~~~I~r~~~~g~~~~~v~~-----~g~~~P~GlAvD~~~~~LY~tD~~~~~I~v~~~d 110 (628)
T 4a0p_A 37 KEASALDFDVTD-NRIYWTDISLKTISRAFMNGSALEHVVE-----FGLDYPEGMAVDWLGKNLYWADTGTNRIEVSKLD 110 (628)
T ss_dssp SCEEEEEEETTT-TEEEEEETTTTEEEEEETTSCSCEEEEC-----SSCSCCCEEEEETTTTEEEEEETTTTEEEEEETT
T ss_pred CceEEEEEECCC-CEEEEEECCCCeEEEEECCCCCcEEEEe-----CCCCCcceEEEEeCCCEEEEEECCCCEEEEEecC
Confidence 457789999862 5556666677889888876542111010 012345677777665543221 34444
Q ss_pred ---eeEecccCCCceeEEEEcC-CCeEEEEe-eCCCeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEE-
Q psy13207 98 ---AHSINAEHKDLIHDVAYDY-YGLRMATC-SSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASS- 171 (197)
Q Consensus 98 ---~~~~~~~~~~~i~~~~~~~-~~~~~~s~-~~d~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~- 171 (197)
...+....-...+.|+++| ...++.+- +..+.|...++.. .....+...-.....++++++++.|+.+
T Consensus 111 G~~~~~l~~~~l~~P~~iavdp~~G~lY~tD~g~~~~I~r~~~dG------~~~~~l~~~~~~P~GlalD~~~~~LY~aD 184 (628)
T 4a0p_A 111 GQHRQVLVWKDLDSPRALALDPAEGFMYWTEWGGKPKIDRAAMDG------SERTTLVPNVGRANGLTIDYAKRRLYWTD 184 (628)
T ss_dssp STTCEEEECSSCCCEEEEEEETTTTEEEEEECSSSCEEEEEETTS------CSCEEEECSCSSEEEEEEETTTTEEEEEE
T ss_pred CCcEEEEEeCCCCCcccEEEccCCCeEEEeCCCCCCEEEEEeCCC------CceEEEECCCCCcceEEEccccCEEEEEE
Confidence 1122112234457788873 33333443 2356777776653 1111111233466889999976655555
Q ss_pred eCCCcEEEEEcCC
Q psy13207 172 GDDGCVRLWKLKK 184 (197)
Q Consensus 172 ~~dg~i~iw~~~~ 184 (197)
...+.|...++..
T Consensus 185 ~~~~~I~~~d~dG 197 (628)
T 4a0p_A 185 LDTNLIESSNMLG 197 (628)
T ss_dssp TTTTEEEEEETTS
T ss_pred CCCCEEEEEcCCC
Confidence 4567888888864
No 331
>2vpj_A Kelch-like protein 12; adaptor protein, WNT signaling pathway, protein-binding, UBI degradation, UBL conjugation pathway, CUL3, kelch repeat; 1.85A {Homo sapiens}
Probab=57.24 E-value=46 Score=23.18 Aligned_cols=65 Identities=9% Similarity=0.076 Sum_probs=34.6
Q ss_pred EEeeCC-----CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC-----CcEEEEEcCCCcchhhh
Q psy13207 122 ATCSSD-----QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD-----GCVRLWKLKKKRKKKKE 191 (197)
Q Consensus 122 ~s~~~d-----~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~ 191 (197)
+.|+.+ ..+.+||..+.+ ...+..+......-..+.+ ++++++.|+.+ ..+.+||+.+. .|..+
T Consensus 164 v~GG~~~~~~~~~~~~~d~~~~~---W~~~~~~p~~r~~~~~~~~--~~~i~v~GG~~~~~~~~~v~~yd~~~~-~W~~~ 237 (301)
T 2vpj_A 164 CLGGYDGLNILNSVEKYDPHTGH---WTNVTPMATKRSGAGVALL--NDHIYVVGGFDGTAHLSSVEAYNIRTD-SWTTV 237 (301)
T ss_dssp EECCBCSSCBCCCEEEEETTTTE---EEEECCCSSCCBSCEEEEE--TTEEEEECCBCSSSBCCCEEEEETTTT-EEEEE
T ss_pred EECCCCCCcccceEEEEeCCCCc---EEeCCCCCcccccceEEEE--CCEEEEEeCCCCCcccceEEEEeCCCC-cEEEC
Confidence 555543 457888887632 2333222221111122222 67777777764 46888998763 46554
Q ss_pred h
Q psy13207 192 E 192 (197)
Q Consensus 192 ~ 192 (197)
.
T Consensus 238 ~ 238 (301)
T 2vpj_A 238 T 238 (301)
T ss_dssp C
T ss_pred C
Confidence 3
No 332
>4asc_A Kelch repeat and BTB domain-containing protein 5; protein binding, cytoskeleton; 1.78A {Homo sapiens}
Probab=56.08 E-value=50 Score=23.26 Aligned_cols=59 Identities=10% Similarity=0.098 Sum_probs=31.4
Q ss_pred CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCCC-----cEEEEEcCCCcchhhhh
Q psy13207 128 QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDG-----CVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 128 ~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~dg-----~i~iw~~~~~~~~~~~~ 192 (197)
..+.+||..+.+ ...+..+......-..+.+ ++++++.|+.++ .+.+||+.+. .|..+.
T Consensus 165 ~~~~~yd~~~~~---W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~~-~W~~~~ 228 (315)
T 4asc_A 165 NKMCVYDPKKFE---WKELAPMQTARSLFGATVH--DGRIIVAAGVTDTGLTSSAEVYSITDN-KWAPFE 228 (315)
T ss_dssp CCEEEEETTTTE---EEECCCCSSCCBSCEEEEE--TTEEEEEEEECSSSEEEEEEEEETTTT-EEEEEC
T ss_pred ceEEEEeCCCCe---EEECCCCCCchhceEEEEE--CCEEEEEeccCCCCccceEEEEECCCC-eEEECC
Confidence 467888887632 2223222211111122222 677888887654 4788888763 565543
No 333
>3das_A Putative oxidoreductase; aldose sugar dehydrogenase, beta propellor, PQQ, SGDH; HET: MSE ARA PQQ; 1.60A {Streptomyces coelicolor}
Probab=55.83 E-value=31 Score=25.40 Aligned_cols=33 Identities=18% Similarity=0.244 Sum_probs=25.7
Q ss_pred eecEEEEEEccCCCEEEEEeCCCcEEEEEcCCC
Q psy13207 153 YCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185 (197)
Q Consensus 153 ~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~ 185 (197)
-...+.++|.|+|+++++--..|.|++++...+
T Consensus 31 L~~P~~ia~~pdG~llVter~~G~I~~v~~~~g 63 (347)
T 3das_A 31 LNSPWGLAPLPGGDLLVSSRDEATITRVDAKTG 63 (347)
T ss_dssp CSSEEEEEECTTSCEEEEETTTCEEEEECTTTC
T ss_pred CCCceEEEEcCCCcEEEEEecCCEEEEEECCCC
Confidence 345689999999998877765899999876543
No 334
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=53.82 E-value=38 Score=27.03 Aligned_cols=59 Identities=7% Similarity=-0.051 Sum_probs=32.1
Q ss_pred eeEEEECCCCCCcEEEEEeCC----------C--cEEEEEcCCcccccceeccceeccCCCeeeEEEccCCCcccce
Q psy13207 28 VTDVKFGPKQLGLVLATCAAD----------G--LVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI 92 (197)
Q Consensus 28 v~~~~~~~~~~~~~l~s~~~d----------g--~v~iw~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 92 (197)
.-.|.|+|. |.+++.-..+ + .+...+..+++..+ ....+....++.++|+|++++|...
T Consensus 478 PDNL~fd~~--G~LwI~eDg~~~~~~~~~~~gnn~~~~~~~~~g~~~r----f~~~P~gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 478 PDGLGFDKA--GRLWILTDGDSSNAGDFAGMGNNQMLCADPATGEIRR----FMVGPIGCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp EEEEEECTT--CCEEEEECCCCCCSGGGTTTCSCEEEEECTTTCCEEE----EEECCTTCEEEEEEECTTSSEEEEE
T ss_pred CcceEECCC--CCEEEEecCCCcccccccccccceEEEEeCCCCeEEE----EEeCCCCccCcCeeECCCCCEEEEE
Confidence 456889998 8766554322 1 22333333332211 1112235678888899988876543
No 335
>3al9_A Plexin-A2; beta-propeller, membrane protein, signaling protein; HET: NAG; 2.10A {Mus musculus} PDB: 3al8_B*
Probab=49.74 E-value=80 Score=24.87 Aligned_cols=71 Identities=8% Similarity=-0.078 Sum_probs=42.2
Q ss_pred ceeEEEEc--CCCeEEEEeeCCCeEEEEEccCCcccceeeeee--ecCceecEE-EEEEccCCCEEEEEeCCCcEEE
Q psy13207 108 LIHDVAYD--YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGN--FEDHYCTVW-RVSWNITGTIVASSGDDGCVRL 179 (197)
Q Consensus 108 ~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~--~~~h~~~v~-~~~~~p~~~~l~~~~~dg~i~i 179 (197)
..++|+.. .++-.+..|+.+|.|.-..+...... ...... +.....+|. .+.+++++.+|+.++.++.+++
T Consensus 401 ~lT~vav~~~~~~tV~flGT~~G~l~KV~l~~~~~~-~~~~e~~~v~~~~~pv~~~l~~~~~~~~Lyv~s~~~V~kv 476 (539)
T 3al9_A 401 RLTSVASYVYNGYSVVFVGTKSGKLKKIRADGPPHG-GVQYEMVSVFKDGSPILRDMAFSINQLYLYVMSERQVTRV 476 (539)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEEEEETTTE-EEEEEEEECCTTCCCCCSCCEECTTSSEEEEECSSEEEEE
T ss_pred ceEEEEeeccCCeEEEEEEcCCCeEEEEEeCCCCcc-ceeEEEEEeecCCCccccceEEccCCCeEEEEecccccee
Confidence 35555554 44445578899998865544321100 011222 222245774 8999999999999988766655
No 336
>4gz8_A Semaphorin-3A; multi-domain, cell-CELL signaling, plexin, glycosilate extracellular, signaling protein; HET: NAG BMA MAN; 3.30A {Mus musculus}
Probab=48.22 E-value=86 Score=25.51 Aligned_cols=61 Identities=10% Similarity=-0.007 Sum_probs=37.0
Q ss_pred eEEEEeeCCCeEE-EEEccCCc--ccceeeeeee--cCceecEEEEEEccCCCEEEEEeCCCcEEE
Q psy13207 119 LRMATCSSDQNIK-VTRDVMGT--RFDIETIGNF--EDHYCTVWRVSWNITGTIVASSGDDGCVRL 179 (197)
Q Consensus 119 ~~~~s~~~d~~i~-~~d~~~~~--~~~~~~~~~~--~~h~~~v~~~~~~p~~~~l~~~~~dg~i~i 179 (197)
-.+..|+.+|.|. +.-..... ......+.++ .....+|..+.+++++++|+.++.++.+++
T Consensus 430 tVlFLGT~~G~I~Kvv~~~~~~~~~~~~~~leEi~v~~~~~pI~~L~ld~~~~~LYV~t~~~V~kV 495 (667)
T 4gz8_A 430 DVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGVAQL 495 (667)
T ss_dssp EEEEEEETTSEEEEEEEEC------CEEEEEEEEECSSSCCCCCEEEEETTTTEEEEEBSSCEEEE
T ss_pred EEEEEECCCCeEEEEEEcCCCCccccceEEEEEEeecCCCceeeeEEEcCCCCEEEEEECCEEEEE
Confidence 3447788999885 33322111 0111122222 234567899999999999999998876665
No 337
>2p9w_A MAL S 1 allergenic protein; beta propeller; 1.35A {Malassezia sympodialis}
Probab=46.48 E-value=84 Score=23.04 Aligned_cols=37 Identities=8% Similarity=0.164 Sum_probs=25.5
Q ss_pred cCCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCc
Q psy13207 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDV 59 (197)
Q Consensus 22 ~~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~ 59 (197)
....---.+.+|.+.. +.++++.-..++|..|+...+
T Consensus 9 ~~~~~yPE~~~wd~~~-g~~~vs~l~~g~V~~~~~~~~ 45 (334)
T 2p9w_A 9 KVKNLTPEDTIYDRTR-QVFYQSNLYKGRIEVYNPKTQ 45 (334)
T ss_dssp CCTTCCCSCEEEETTT-TEEEEEETTTTEEEEECTTTC
T ss_pred cCcccCCcCccCcCCC-CEEEEEeccCCEEEEEcCCCC
Confidence 3444455678898851 555666658999999998644
No 338
>1q47_A Semaphorin 3A; beta propeller, signaling protein; HET: NAG; 2.80A {Mus musculus} SCOP: b.69.12.1
Probab=43.24 E-value=94 Score=24.19 Aligned_cols=72 Identities=8% Similarity=-0.018 Sum_probs=41.2
Q ss_pred ceeEEEEc------CCCeEEEEeeCCCeEEEEEc-cCCc--ccceeeeeeec--CceecEEEEEEccCCCEEEEEeCCCc
Q psy13207 108 LIHDVAYD------YYGLRMATCSSDQNIKVTRD-VMGT--RFDIETIGNFE--DHYCTVWRVSWNITGTIVASSGDDGC 176 (197)
Q Consensus 108 ~i~~~~~~------~~~~~~~s~~~d~~i~~~d~-~~~~--~~~~~~~~~~~--~h~~~v~~~~~~p~~~~l~~~~~dg~ 176 (197)
..++|+.. +++-.+..|+.+|.|.-.-+ .... ......+.++. ....+|..+.+++++.+|+.++.++.
T Consensus 405 ~lT~IaVd~v~~~~~~~tV~flGT~~G~l~Kvv~~~~~~~~~~~~~~~eei~v~~~~~pI~~m~l~~~~~~Lyv~s~~~V 484 (495)
T 1q47_A 405 QFTQIVVDRVDAEDGQYDVMFIGTDVGTVLKVVSVPKETWHDLEEVLLEEMTVFREPTTISAMELSTKQQQLYIGSTAGV 484 (495)
T ss_dssp CEEEEEEEEEECSSCEEEEEEEEETTSCEEEEECC-----------CCEEECCSSSCCCCCEEEEETTTTEEEEEBSSCE
T ss_pred ceEEEEEEEEccCCCcEEEEEEeCCCcEEEEEEEcCCCCccccceEEEEEEeecCCCCccceEEEcCCCCEEEEEECCeE
Confidence 34555544 23334478889998853332 2110 00111222222 23568899999999999999998876
Q ss_pred EEE
Q psy13207 177 VRL 179 (197)
Q Consensus 177 i~i 179 (197)
++|
T Consensus 485 ~~v 487 (495)
T 1q47_A 485 AQL 487 (495)
T ss_dssp EEE
T ss_pred EEE
Confidence 665
No 339
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=42.97 E-value=1e+02 Score=22.93 Aligned_cols=158 Identities=11% Similarity=0.037 Sum_probs=85.9
Q ss_pred CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcc-cccceeccceeccCCCeeeEEEccCCCccc------------c
Q psy13207 25 RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVM-NLSQWCLQHEVACPTLASCLTWNHSFSRFN------------S 91 (197)
Q Consensus 25 ~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~------------~ 91 (197)
...|.--+|-.. . .|+-.+ +..|+-|++.... ..+.+.....+. ...|....-+++.++++ .
T Consensus 106 ~e~VvfWkWis~--~-~L~lVT-~taVyHWs~~~~s~P~kvFdR~~~L~-~~QIInY~~d~~~kW~~l~GI~~~~~~v~G 180 (365)
T 2xzh_A 106 TDDVTFWKWISL--N-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLA-GCQIINYRTDAKQKWLLLTGISAQQNRVVG 180 (365)
T ss_dssp SSCEEEEEECSS--S-EEEEEE-SSEEEEEESSTTCCCEEEEECCGGGT-TCEEEEEEECTTSCEEEEEEEEEETTEEEE
T ss_pred CCccEEEEecCC--C-eEEEEc-CCcEEEEcccCCCCCceeeecchhcc-cceEEEEEECCCCCEEEEEeEeccCCccce
Confidence 356777778654 3 333333 3588999987532 222333333332 44555556666666542 2
Q ss_pred eeEEEE-----eeEecccCCCceeEEEEc-----CCCeEEEEeeCC-CeEEEEEccCC----cccceeeeeeec---Cce
Q psy13207 92 ISIMYE-----AHSINAEHKDLIHDVAYD-----YYGLRMATCSSD-QNIKVTRDVMG----TRFDIETIGNFE---DHY 153 (197)
Q Consensus 92 ~~~~~~-----~~~~~~~~~~~i~~~~~~-----~~~~~~~s~~~d-~~i~~~d~~~~----~~~~~~~~~~~~---~h~ 153 (197)
.+.+|. -..+. +|-.....+... ...+.|+.-+.. +.+++.++... ..+..+.+..+. ...
T Consensus 181 ~mQLYS~er~~sQ~ie-Ghaa~F~~~~~~g~~~~~~lf~fa~r~~~g~kLhIiEi~~~~~~~~~f~kk~vdi~fppea~~ 259 (365)
T 2xzh_A 181 AMQLYSVDRKVSQPIE-GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTGNQPFPKKAVDVFFPPEAQN 259 (365)
T ss_dssp EEEEEETTTTEEEEEC-CSEEEEEEECCTTCSSCEEEEEEEEEETTEEEEEEEECSSCCTTCCCCCCEEEEECCCTTCTT
T ss_pred eEEEEeecccccceee-eeeeeeEEEecCCCCCCceEEEEEEecCCCcEEEEEEcCCCCCCCCCcccccceeeCCccccC
Confidence 256777 33334 555444333333 112322332222 58888888542 111112121111 123
Q ss_pred ecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 154 CTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 154 ~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
+-..++..++....+..-+.-|.+++||+.++.++
T Consensus 260 DFPVamqvs~kygviyviTK~G~ihlyDleTgt~i 294 (365)
T 2xzh_A 260 DFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 294 (365)
T ss_dssp CCEEEEEEETTTTEEEEEETTSEEEEEETTTCCEE
T ss_pred CceEEEEecccCCEEEEEeCCcEEEEEEcccCcEE
Confidence 33456888887778888899999999999998754
No 340
>2xzh_A Clathrin heavy chain 1; endocytosis, endocytosis inhibition; HET: VH2; 1.69A {Homo sapiens} PDB: 2xzg_A* 3gc3_B 1utc_A 3gd1_I 1c9i_A 1c9l_A
Probab=39.71 E-value=1.1e+02 Score=22.64 Aligned_cols=72 Identities=14% Similarity=0.171 Sum_probs=45.4
Q ss_pred CceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCc----eecEEEEEEccCCCEEEEEeC-------C
Q psy13207 107 DLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDH----YCTVWRVSWNITGTIVASSGD-------D 174 (197)
Q Consensus 107 ~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h----~~~v~~~~~~p~~~~l~~~~~-------d 174 (197)
+.|..=.|- ++.+-|+| +..|+-|++... ..+.+.+..| ...|.....+++.++++..+- .
T Consensus 107 e~VvfWkWis~~~L~lVT---~taVyHWs~~~~----s~P~kvFdR~~~L~~~QIInY~~d~~~kW~~l~GI~~~~~~v~ 179 (365)
T 2xzh_A 107 DDVTFWKWISLNTVALVT---DNAVYHWSMEGE----SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVV 179 (365)
T ss_dssp SCEEEEEECSSSEEEEEE---SSEEEEEESSTT----CCCEEEEECCGGGTTCEEEEEEECTTSCEEEEEEEEEETTEEE
T ss_pred CccEEEEecCCCeEEEEc---CCcEEEEcccCC----CCCceeeecchhcccceEEEEEECCCCCEEEEEeEeccCCccc
Confidence 455555665 66664444 467889998642 3344444444 356777888888887765542 3
Q ss_pred CcEEEEEcCCC
Q psy13207 175 GCVRLWKLKKK 185 (197)
Q Consensus 175 g~i~iw~~~~~ 185 (197)
|.+.+|.....
T Consensus 180 G~mQLYS~er~ 190 (365)
T 2xzh_A 180 GAMQLYSVDRK 190 (365)
T ss_dssp EEEEEEETTTT
T ss_pred eeEEEEeeccc
Confidence 67788887653
No 341
>2g8s_A Glucose/sorbosone dehydrogenases; bladed beta-propellor, pyrolloquinoline quinone (PQQ), quinoprotein, sugar binding protein; HET: MSE; 1.50A {Escherichia coli K12}
Probab=39.43 E-value=56 Score=23.81 Aligned_cols=28 Identities=14% Similarity=0.412 Sum_probs=21.9
Q ss_pred cEEEEEEccCCC-EEEEEeCCCcEEEEEcC
Q psy13207 155 TVWRVSWNITGT-IVASSGDDGCVRLWKLK 183 (197)
Q Consensus 155 ~v~~~~~~p~~~-~l~~~~~dg~i~iw~~~ 183 (197)
..+.++|.|+|+ ++++ ...|.|++++..
T Consensus 19 ~P~~i~~~pdG~~l~V~-e~~G~i~~~~~~ 47 (353)
T 2g8s_A 19 HPWALAFLPDNHGMLIT-LRGGELRHWQAG 47 (353)
T ss_dssp SEEEEEECSTTCCEEEE-ETTTEEEEEETT
T ss_pred CcEEEEEcCCCCEEEEE-eCCceEEEEeCC
Confidence 458899999999 5554 467999999854
No 342
>1olz_A Semaphorin 4D; developmental protein, CD100, beta-propeller, PSI domain, IG-like domain, extracellular receptor, neurogenesis; 2.0A {Homo sapiens} SCOP: b.1.1.4 b.69.12.1 g.16.2.1 PDB: 3ol2_A*
Probab=38.76 E-value=1.5e+02 Score=24.09 Aligned_cols=58 Identities=14% Similarity=0.110 Sum_probs=35.8
Q ss_pred EEEEeeCCCeEEE-EEccCCcccceeeeeeecCceecEEEEEEccCC--CEEEEEeCCCcEEE
Q psy13207 120 RMATCSSDQNIKV-TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITG--TIVASSGDDGCVRL 179 (197)
Q Consensus 120 ~~~s~~~d~~i~~-~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~--~~l~~~~~dg~i~i 179 (197)
.+..|+.+|.|.- ....... ...+.+..+ ....+|..+.++++. .+|+.++.++.+++
T Consensus 417 V~flGT~~G~l~Kvv~~~~~~-~~~ee~~~~-~~~~pI~~l~l~~~~~~~~Lyv~s~~~V~~v 477 (663)
T 1olz_A 417 VMFVSTDRGALHKAISLEHAV-HIIEETQLF-QDFEPVQTLLLSSKKGNRFVYAGSNSGVVQA 477 (663)
T ss_dssp EEEEEETTSEEEEEEECSSSE-EEEEEEECC-TTCCCCCEEEECCSSSSCEEEEECSSCEEEE
T ss_pred EEEEEcCCcEEEEEEecCCCc-eEEEEeccc-CCCCcceeeEeccCCCccEEEEEEcCeEEEE
Confidence 3477889998853 3333210 111222222 235678889999987 89999988876665
No 343
>3nvq_A Semaphorin-7A; beta-propeller, signaling, signaling protein-protein binding; HET: NAG NDG; 2.40A {Homo sapiens}
Probab=35.81 E-value=1.3e+02 Score=24.00 Aligned_cols=61 Identities=7% Similarity=-0.077 Sum_probs=36.3
Q ss_pred eEEEEeeCCCeEEEEEc-cCCcccceeeeeeec--CceecEEEEEEccCCCEEEEEeCCCcEEE
Q psy13207 119 LRMATCSSDQNIKVTRD-VMGTRFDIETIGNFE--DHYCTVWRVSWNITGTIVASSGDDGCVRL 179 (197)
Q Consensus 119 ~~~~s~~~d~~i~~~d~-~~~~~~~~~~~~~~~--~h~~~v~~~~~~p~~~~l~~~~~dg~i~i 179 (197)
-.+..|+.+|.|.-.-. ..........+.++. ....+|..+.++++...|+.++.++.+++
T Consensus 381 tVlFLGT~~G~l~Kvv~~~~~~~~~~~~ieei~~~~~~~pi~~L~ls~~~~~LyV~s~~~V~qV 444 (590)
T 3nvq_A 381 HVLYLTTDRGTIHKVVEPGEQEHSFAFNIMEIQPFRRAAAIQTMSLDAERRKLYVSSQWEVSQV 444 (590)
T ss_dssp EEEEEEETTSCEEEEECCCSSTTCCCEEEEEECCCSSCCCCCEEEEETTTTEEEEECSSEEEEE
T ss_pred EEEEEEcCCcEEEEEEecCCCCcceeEEEEEeeccCCCCceeeEEEcCCCCEEEEEecceEEEc
Confidence 34467888998854333 211000011122222 23567899999999999999988866665
No 344
>4a9v_A PHOX; hydrolase, beta-propeller; 1.10A {Pseudomonas fluorescens} PDB: 3zwu_A 4a9x_A*
Probab=35.72 E-value=1.5e+02 Score=23.72 Aligned_cols=17 Identities=18% Similarity=0.221 Sum_probs=11.6
Q ss_pred cceeEEEECCCCCCcEEEE
Q psy13207 26 TSVTDVKFGPKQLGLVLAT 44 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s 44 (197)
.....|.|.++ |.+.++
T Consensus 476 nsPDnL~fd~~--G~LWf~ 492 (592)
T 4a9v_A 476 NSPDGLGFDKA--GRLWIL 492 (592)
T ss_dssp CCEEEEEECTT--CCEEEE
T ss_pred CCCCceEECCC--CCEEEE
Confidence 34567888887 776663
No 345
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=33.28 E-value=2.9e+02 Score=25.38 Aligned_cols=173 Identities=11% Similarity=0.047 Sum_probs=87.0
Q ss_pred cccceeeeee--eecCC--CcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcc-cccceeccceeccCCCeeeEEEcc
Q psy13207 10 KCLNQWTRRS--NLVDS--RTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVM-NLSQWCLQHEVACPTLASCLTWNH 84 (197)
Q Consensus 10 ~~~~~w~~~~--~~~~h--~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~-~~~~~~~~~~~~~~~~~~~~~~~~ 84 (197)
.++.++++.. .++.| +.+|.--+|-.. . .|+-.+ +..|.-|++.... +.+.+.....+. ...|..-.-++
T Consensus 86 ~~lQiFnl~~k~klks~~~~e~VvfWkWis~--~-~l~lVT-~~aVyHW~~~~~s~P~k~fdR~~~L~-~~QIinY~~d~ 160 (1630)
T 1xi4_A 86 KTLQIFNIEMKSKMKAHTMTDDVTFWKWISL--N-TVALVT-DNAVYHWSMEGESQPVKMFDRHSSLA-GCQIINYRTDA 160 (1630)
T ss_pred CeEEEeehHHhhhhcccccCCCceEEEecCC--C-eeEEEc-CCeEEEeccCCCCccHHHHhcchhcc-cCeeEEeeeCC
Confidence 3445555532 24444 356777788654 3 333332 3589999996432 222233222222 33444444444
Q ss_pred CCCc------------ccceeEEEE-----eeEecccCCCceeEEEEc----C-CCeEEEEee-CCCeEEEEEccCC---
Q psy13207 85 SFSR------------FNSISIMYE-----AHSINAEHKDLIHDVAYD----Y-YGLRMATCS-SDQNIKVTRDVMG--- 138 (197)
Q Consensus 85 ~~~~------------~~~~~~~~~-----~~~~~~~~~~~i~~~~~~----~-~~~~~~s~~-~d~~i~~~d~~~~--- 138 (197)
+.++ +...+.+|. -..+. +|-.....+... + ..+.|+.-+ ..+.+++.++...
T Consensus 161 ~~kW~~l~gi~~~~~~v~G~mQLyS~er~~sQ~ie-gha~~F~~~~~~~~~~~~~l~~f~~~~~~g~kLhi~Ei~~~~~~ 239 (1630)
T 1xi4_A 161 KQKWLLLTGISAQQNRVVGAMQLYSVDRKVSQPIE-GHAASFAQFKMEGNAEESTLFCFAVRGQAGGKLHIIEVGTPPTG 239 (1630)
T ss_pred CCCeEEEEeeccCCCcccceeeeeecccccchhhh-HhHhhhheeccCCCCCCceEEEEEEecCCCceEEEEecCCCccC
Confidence 4444 334467777 22223 454443333333 1 122112211 1268888887542
Q ss_pred -cccceeeeeeecC---ceecEEEEEEccCCCEEEEEeCCCcEEEEEcCCCcch
Q psy13207 139 -TRFDIETIGNFED---HYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188 (197)
Q Consensus 139 -~~~~~~~~~~~~~---h~~~v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~ 188 (197)
..+..+.+..+.. -.+-..++..++....+..-+.-|.+.++|+.++..+
T Consensus 240 ~~~f~kk~~~~~~~~~~~~Dfpv~~~vs~k~g~iy~itk~G~~~~~d~~t~~~i 293 (1630)
T 1xi4_A 240 NQPFPKKAVDVFFPPEAQNDFPVAMQISEKHDVVFLITKYGYIHLYDLETGTCI 293 (1630)
T ss_pred CCCCccccccccCCcccccCcceEEEeccccCEEEEEecCceEEEEecccchhh
Confidence 1111111111111 1222345777887777888888999999999987654
No 346
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=32.74 E-value=2e+02 Score=23.28 Aligned_cols=99 Identities=11% Similarity=-0.048 Sum_probs=57.5
Q ss_pred CCCeeeEEEccCCCcccce------eEEEEeeEe-----------------cccCCCceeEEEEcCCCeEEEEeeCCCeE
Q psy13207 74 PTLASCLTWNHSFSRFNSI------SIMYEAHSI-----------------NAEHKDLIHDVAYDYYGLRMATCSSDQNI 130 (197)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~------~~~~~~~~~-----------------~~~~~~~i~~~~~~~~~~~~~s~~~d~~i 130 (197)
......+..+|+|+++..+ +.+++...+ ...-.-.....+|.++.....|.--|..|
T Consensus 322 pksPHGv~vsPDGkyi~v~GKLsptvtV~d~~k~~~~~~~k~~~~~~~~~ae~e~GlGPlHt~Fd~~G~aYTtlfidSqv 401 (638)
T 3sbq_A 322 PKNPHGCNTSSDGKYFIAAGKLSPTCSMIAIDKLPDLFAGKLADPRDVIVGEPELGLGPLHTTFDGRGNAYTTLFIDSQV 401 (638)
T ss_dssp SSSCCCEEECTTSCEEEEECTTSSBEEEEEGGGHHHHHTTCCSCGGGGEEECCBCCSCEEEEEECSSSEEEEEETTTTEE
T ss_pred CCCCcceeeCCCCCEEEEcCCCCCeEEEEEeehhhhhhhccccCcccceEeeccCCCcccEEEECCCCceEeeeeecceE
Confidence 5667889999999997554 677772211 00123455778898555533666689999
Q ss_pred EEEEccCCc-c----cceeeeeeecCceecEEEE-----EEccCCCEEEEEe
Q psy13207 131 KVTRDVMGT-R----FDIETIGNFEDHYCTVWRV-----SWNITGTIVASSG 172 (197)
Q Consensus 131 ~~~d~~~~~-~----~~~~~~~~~~~h~~~v~~~-----~~~p~~~~l~~~~ 172 (197)
..|++.... . .-...+..+.-|.++-.-. .-.|+|++|++..
T Consensus 402 vkWni~~a~~~~~g~~~~~v~~k~dv~YqpGH~~~~~get~~~dGk~lv~ln 453 (638)
T 3sbq_A 402 VKWNMEEAVRAYKGEKVNYIKQKLDVHYQPGHLHASLCETNEADGKWLVALS 453 (638)
T ss_dssp EEEEHHHHHHHHTTCCCCCEEEEEECSSCEEEEEETTTTSTTCCSCEEEEEE
T ss_pred EEEeccHHHHHhcCccCCeeeeccccccCCcccccCCCccCCCCccEEEEec
Confidence 999986410 0 0012344444444332211 1246778877763
No 347
>2zwa_A Leucine carboxyl methyltransferase 2; HET: SAH CIT; 1.70A {Saccharomyces cerevisiae} PDB: 2zw9_A* 2zzk_A*
Probab=31.69 E-value=2.1e+02 Score=23.23 Aligned_cols=62 Identities=6% Similarity=0.047 Sum_probs=33.9
Q ss_pred EEeeCCC--eEEEEEccCCcccceeeeee---ecCceecEEEEEEccC-CCEEEEEeC--C-----CcEEEEEcCCCc
Q psy13207 122 ATCSSDQ--NIKVTRDVMGTRFDIETIGN---FEDHYCTVWRVSWNIT-GTIVASSGD--D-----GCVRLWKLKKKR 186 (197)
Q Consensus 122 ~s~~~d~--~i~~~d~~~~~~~~~~~~~~---~~~h~~~v~~~~~~p~-~~~l~~~~~--d-----g~i~iw~~~~~~ 186 (197)
+.|+.++ .+.+||..+.. ...+.. +......-.++.+..+ +++++.|+. + ..+..||+.+..
T Consensus 505 v~GG~~~~~~v~~yd~~t~~---W~~~~~~g~~p~~r~~~~a~v~~~~~~~iyv~GG~~~~~~~~~~~v~~yd~~~~~ 579 (695)
T 2zwa_A 505 ILGGVTEGPAMLLYNVTEEI---FKDVTPKDEFFQNSLVSAGLEFDPVSKQGIILGGGFMDQTTVSDKAIIFKYDAEN 579 (695)
T ss_dssp EECCBCSSCSEEEEETTTTE---EEECCCSSGGGGSCCBSCEEEEETTTTEEEEECCBCTTSSCBCCEEEEEEECTTC
T ss_pred EECCCCCCCCEEEEECCCCc---eEEccCCCCCCCcccceeEEEEeCCCCEEEEECCcCCCCCeeeCcEEEEEccCCc
Confidence 5565543 68889987632 222221 1111111123455554 667777765 2 358889988765
No 348
>3ol2_B Plexin-B1; beta-propeller, signalling, extacellular, signaling protein; HET: NAG BMA; 2.99A {Homo sapiens}
Probab=31.39 E-value=1.9e+02 Score=22.75 Aligned_cols=70 Identities=9% Similarity=-0.090 Sum_probs=42.5
Q ss_pred ceeEEEEc--CCCeEEEEeeCCCeEEEEEcc-CCcccceeeeeeecCceecE-EEEEEccCCCEEEEEeCCCcEEE
Q psy13207 108 LIHDVAYD--YYGLRMATCSSDQNIKVTRDV-MGTRFDIETIGNFEDHYCTV-WRVSWNITGTIVASSGDDGCVRL 179 (197)
Q Consensus 108 ~i~~~~~~--~~~~~~~s~~~d~~i~~~d~~-~~~~~~~~~~~~~~~h~~~v-~~~~~~p~~~~l~~~~~dg~i~i 179 (197)
..+.|+.. ...-.+..|+.+|.|.-.-.. .......+.+. + ....+| ..+.++++..+|+.++..+.+++
T Consensus 388 ~lT~IaVd~~~g~tV~FlGT~~G~l~Kv~~~~~~~~~~~ee~~-v-~~~~pi~~~l~l~~~~~~Lyv~s~~~V~~v 461 (528)
T 3ol2_B 388 QLTAVAVTMEDGHTIAFLGDSQGQLHRVYLGPGSDGHPYSTQS-I-QQGSAVSRDLTFDGTFEHLYVMTQSTLLKV 461 (528)
T ss_dssp CEEEEEEEEETTEEEEEEEETTSEEEEEECSSSCCSCCSEEEE-S-STTSCCCSCCEECTTSSEEEEECSSCEEEE
T ss_pred ceEEEEEEeecCeEEEEEECCCCeEEEEEEcCCCCeeEEeeec-c-CCCCcceeeEEEecCCCEEEEEeCCEEEEE
Confidence 46666665 334444778899998644432 21111112222 2 234567 48899999999999988877766
No 349
>2ism_A Putative oxidoreductase; BL41XU spring-8, bladed beta-propellor, glucose dehydrogenas structural genomics, NPPSFA; 1.90A {Thermus thermophilus}
Probab=31.37 E-value=1.5e+02 Score=21.48 Aligned_cols=71 Identities=10% Similarity=0.026 Sum_probs=39.7
Q ss_pred CceeEEEEcCCC-eEEEEeeCCCeEEEEEccCCcccceeeeeee---cCceecEEEEEEccC---CCEEEEE-eCC----
Q psy13207 107 DLIHDVAYDYYG-LRMATCSSDQNIKVTRDVMGTRFDIETIGNF---EDHYCTVWRVSWNIT---GTIVASS-GDD---- 174 (197)
Q Consensus 107 ~~i~~~~~~~~~-~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~---~~h~~~v~~~~~~p~---~~~l~~~-~~d---- 174 (197)
.....++|.++. + +.+..++.|.+++ .. + ...+..+ .........++++|+ +..|+.+ +.+
T Consensus 31 ~~P~~ia~~pdG~l--~V~e~~g~I~~i~-~g-~---~~~~~~~~v~~~g~~~p~gia~~pdf~~~g~lYv~~~~~~~~~ 103 (352)
T 2ism_A 31 EVPWALAFLPDGGM--LIAERPGRIRLFR-EG-R---LSTYAELSVYHRGESGLLGLALHPRFPQEPYVYAYRTVAEGGL 103 (352)
T ss_dssp SCEEEEEECTTSCE--EEEETTTEEEEEE-TT-E---EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEECTTSS
T ss_pred CCceEEEEcCCCeE--EEEeCCCeEEEEE-CC-C---ccEeecceEeecCCCCceeEEECCCCCCCCEEEEEEecCCCCC
Confidence 345678887332 3 4455668888887 21 1 2222221 112345789999998 4444443 332
Q ss_pred -CcEEEEEcCC
Q psy13207 175 -GCVRLWKLKK 184 (197)
Q Consensus 175 -g~i~iw~~~~ 184 (197)
+.|..++...
T Consensus 104 ~~~v~r~~~~~ 114 (352)
T 2ism_A 104 RNQVVRLRHLG 114 (352)
T ss_dssp EEEEEEEEECS
T ss_pred ccEEEEEEeCC
Confidence 5677777763
No 350
>2be1_A Serine/threonine-protein kinase/endoribonuclease; transcription; 2.98A {Saccharomyces cerevisiae}
Probab=30.53 E-value=1.2e+02 Score=22.29 Aligned_cols=59 Identities=8% Similarity=0.079 Sum_probs=31.9
Q ss_pred EEeeCCCeEEEEEccCCcccceeeeeeecCc-eecEEEEEE--cc-CCCEEEEE-eCCCcEEEEEcCCC
Q psy13207 122 ATCSSDQNIKVTRDVMGTRFDIETIGNFEDH-YCTVWRVSW--NI-TGTIVASS-GDDGCVRLWKLKKK 185 (197)
Q Consensus 122 ~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h-~~~v~~~~~--~p-~~~~l~~~-~~dg~i~iw~~~~~ 185 (197)
+.++.||.|.-+|..+ ++..=.+... ..++....- .+ ++..++.. +.||.+..++..++
T Consensus 14 ~v~t~dG~l~Ald~~t-----G~~~W~~~~~~~~p~~~~~~~~~~~~~~~~vv~p~~dG~l~a~~~~~G 77 (339)
T 2be1_A 14 IAADVEGGLHAVDRRN-----GHIIWSIEPENFQPLIEIQEPSRLETYETLIIEPFGDGNIYYFNAHQG 77 (339)
T ss_dssp EEEETTSCEEEEETTT-----TEEEEEECGGGSCCSEECCCSCTTTSSEEEEECCSTTTEEEEEETTTE
T ss_pred EEEeCCCeEEEEECCC-----CcEEEEecCCccCCcEEecCCccccCCcEEEEEECCCCEEEEEECCCC
Confidence 7889999999999876 3333333221 011111100 01 23333333 47888888887665
No 351
>1xi4_A Clathrin heavy chain; alpha-ZIG-ZAG, beta-propeller, endocytosis-exocyto complex; 7.90A {Bos taurus} SCOP: i.23.1.1 PDB: 1xi5_A 3iyv_A
Probab=29.19 E-value=3.4e+02 Score=24.95 Aligned_cols=72 Identities=14% Similarity=0.175 Sum_probs=45.8
Q ss_pred CceeEEEEc-CCCeEEEEeeCCCeEEEEEccCCcccceeeeeeecCc----eecEEEEEEccCCCEEEEEe-------CC
Q psy13207 107 DLIHDVAYD-YYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDH----YCTVWRVSWNITGTIVASSG-------DD 174 (197)
Q Consensus 107 ~~i~~~~~~-~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~~~h----~~~v~~~~~~p~~~~l~~~~-------~d 174 (197)
..|..=.|- ++.+-|+| +..|.-|++... ..+...+..| ...|..-..+++.++++..| -.
T Consensus 106 e~VvfWkWis~~~l~lVT---~~aVyHW~~~~~----s~P~k~fdR~~~L~~~QIinY~~d~~~kW~~l~gi~~~~~~v~ 178 (1630)
T 1xi4_A 106 DDVTFWKWISLNTVALVT---DNAVYHWSMEGE----SQPVKMFDRHSSLAGCQIINYRTDAKQKWLLLTGISAQQNRVV 178 (1630)
T ss_pred CCceEEEecCCCeeEEEc---CCeEEEeccCCC----CccHHHHhcchhcccCeeEEeeeCCCCCeEEEEeeccCCCccc
Confidence 455555665 77774444 467899998531 2344444444 45677778888888776543 34
Q ss_pred CcEEEEEcCCC
Q psy13207 175 GCVRLWKLKKK 185 (197)
Q Consensus 175 g~i~iw~~~~~ 185 (197)
|.+.+|.+..+
T Consensus 179 G~mQLyS~er~ 189 (1630)
T 1xi4_A 179 GAMQLYSVDRK 189 (1630)
T ss_pred ceeeeeecccc
Confidence 78899988653
No 352
>4a0p_A LRP6, LRP-6, low-density lipoprotein receptor-related protein; signaling, WNT signalling, WNT3A, DKK1, MESD; HET: NAG; 1.90A {Homo sapiens} PDB: 3s2k_A* 3s8z_A* 3s8v_A*
Probab=29.15 E-value=2.2e+02 Score=22.78 Aligned_cols=151 Identities=9% Similarity=-0.036 Sum_probs=78.4
Q ss_pred cceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcccccceecccee---ccCCCeeeEEEccCCCcccc------eeEEE
Q psy13207 26 TSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEV---ACPTLASCLTWNHSFSRFNS------ISIMY 96 (197)
Q Consensus 26 ~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~~~~~~~~~~~~---~~~~~~~~~~~~~~~~~~~~------~~~~~ 96 (197)
..+.+++|.+.+ +.++.+=...+.|+-+++...... ++. .... ........+++...++.|.. .+.+.
T Consensus 340 ~~~~~ld~d~~~-~~iy~sD~~~~~I~r~~~~g~~~~-~v~-~~~~~~~~~~~~p~glAvD~~~~nLY~td~~~~~I~v~ 416 (628)
T 4a0p_A 340 RNVRAIDYDPLD-KQLYWIDSRQNMIRKAQEDGSQGF-TVV-VSSVPSQNLEIQPYDLSIDIYSRYIYWTCEATNVINVT 416 (628)
T ss_dssp SCEEEEEEETTT-TEEEEEETTTTEEEEEETTSCSCE-EEE-C--------CCCEEEEEEETTTTEEEEEETTTTEEEEE
T ss_pred CCceEEEEecCC-CeEEEEecCcceEEEEEcCCCCce-EEE-EcccccccccCCcceEEeeccCCeEEEEcCCCCEEEEE
Confidence 446788888852 444555455677877776543211 110 0000 01235678888887665422 14444
Q ss_pred E-----eeEecccCCCceeEEEEcC-CCeEEEEeeCCC--eEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEE
Q psy13207 97 E-----AHSINAEHKDLIHDVAYDY-YGLRMATCSSDQ--NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIV 168 (197)
Q Consensus 97 ~-----~~~~~~~~~~~i~~~~~~~-~~~~~~s~~~d~--~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l 168 (197)
+ ...+........++|+++| +..++.+-.... .|...++.. ..........-...+.++++++++.|
T Consensus 417 ~~~G~~~~~l~~~~l~~Pr~iavdp~~g~ly~tD~g~~~~~I~r~~~dG-----~~~~~l~~~~l~~P~gla~D~~~~~L 491 (628)
T 4a0p_A 417 RLDGRSVGVVLKGEQDRPRAVVVNPEKGYMYFTNLQERSPKIERAALDG-----TEREVLFFSGLSKPIALALDSRLGKL 491 (628)
T ss_dssp ETTSCEEEEEEECTTCCEEEEEEETTTTEEEEEEEETTEEEEEEEETTS-----CSCEEEECSSCSCEEEEEEETTTTEE
T ss_pred ECCCCeEEEEEeCCCCceeeEEEecCCCeEEEeecCCCCCeEEEEeCCC-----CCcEEEEeccCCCccEEEEeCCCCEE
Confidence 4 1122112335577888874 444445533332 565555542 11111122223456889999976666
Q ss_pred EEEe-CCCcEEEEEcCC
Q psy13207 169 ASSG-DDGCVRLWKLKK 184 (197)
Q Consensus 169 ~~~~-~dg~i~iw~~~~ 184 (197)
+.+. ..+.|...+++-
T Consensus 492 Yw~D~~~~~I~~~~~dG 508 (628)
T 4a0p_A 492 FWADSDLRRIESSDLSG 508 (628)
T ss_dssp EEEETTTTEEEEEETTS
T ss_pred EEEeCCCCEEEEEeCCC
Confidence 6554 457888888754
No 353
>1ukf_A Avirulence protein AVRPPH3; AVRPPHB, hypersensitive response, hydrolase; 1.35A {Pseudomonas syringae PV} SCOP: d.3.1.10
Probab=28.24 E-value=97 Score=20.55 Aligned_cols=37 Identities=11% Similarity=0.243 Sum_probs=27.9
Q ss_pred CCCcceeEEEECCCCCCcEEEEEeCCCcEEEEEcCCcc
Q psy13207 23 DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVM 60 (197)
Q Consensus 23 ~h~~~v~~~~~~~~~~~~~l~s~~~dg~v~iw~~~~~~ 60 (197)
....-+.++.|... ...-+++.+.+|++.++|.+-++
T Consensus 116 ~g~~hllsl~f~~g-~aHaia~S~~g~~~tlFDPN~GE 152 (188)
T 1ukf_A 116 SGRKHLLSLRFANV-QGHAIACSCEGSQFKLFDPNLGE 152 (188)
T ss_dssp TTCEEEEEEEETTT-EEEEEEEEEETTEEEEEETTTEE
T ss_pred CCCceEEEEEecCC-CceeEEeccCCCeEEEeCCCCce
Confidence 34556777888864 24667888889999999998775
No 354
>3a9g_A Putative uncharacterized protein; PQQ dependent dehydrogenase, aldose sugar dehydrogenase, BET propeller fold, oxidoreductase; HET: TRE; 2.39A {Pyrobaculum aerophilum} PDB: 3a9h_A*
Probab=28.17 E-value=1.7e+02 Score=21.21 Aligned_cols=72 Identities=10% Similarity=-0.008 Sum_probs=39.8
Q ss_pred CceeEEEEcCCCeEEEEeeCCCeEEEEEccCCcccceeeeeee---cCceecEEEEEEccC---CCEEE-EEeC---C--
Q psy13207 107 DLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNF---EDHYCTVWRVSWNIT---GTIVA-SSGD---D-- 174 (197)
Q Consensus 107 ~~i~~~~~~~~~~~~~s~~~d~~i~~~d~~~~~~~~~~~~~~~---~~h~~~v~~~~~~p~---~~~l~-~~~~---d-- 174 (197)
.....++|.++.-+ +.+..++.|+++|.. + ...+..+ .........++++|+ +..|+ +-+. +
T Consensus 29 ~~P~~ia~~pdG~l-~V~e~~g~I~~~d~~-G----~~~~~~~~v~~~g~~g~~gia~~pdf~~~g~lyv~~~~~~~~~~ 102 (354)
T 3a9g_A 29 EVPWSIAPLGGGRY-LVTERPGRLVLISPS-G----KKLVASFDVANVGEAGLLGLALHPEFPKKSWVYLYASYFAEGGH 102 (354)
T ss_dssp SCEEEEEEEETTEE-EEEETTTEEEEECSS-C----EEEEEECCCCCSTTCSEEEEEECTTTTTSCEEEEEEEEECGGGC
T ss_pred CCCeEEEEcCCCeE-EEEeCCCEEEEEeCC-C----ceEeeccceeecCCCceeeEEeCCCCCcCCEEEEEEeccCCCCC
Confidence 45677888733221 455666899888732 1 1222221 112345789999997 44444 4332 3
Q ss_pred --CcEEEEEcCC
Q psy13207 175 --GCVRLWKLKK 184 (197)
Q Consensus 175 --g~i~iw~~~~ 184 (197)
..|..|+...
T Consensus 103 ~~~~v~r~~~~~ 114 (354)
T 3a9g_A 103 IRNRVIRGRLDG 114 (354)
T ss_dssp EEEEEEEEEECS
T ss_pred cceEEEEEEECC
Confidence 5677777654
No 355
>3sbq_A Nitrous-oxide reductase; beta-propeller, cupredoxin domain, copper-contain periplasmic, oxidoreductase; 1.70A {Pseudomonas stutzeri} PDB: 3sbp_A 3sbr_A 1qni_A
Probab=27.99 E-value=67 Score=25.80 Aligned_cols=30 Identities=10% Similarity=0.071 Sum_probs=24.9
Q ss_pred EEEEEEccCCCEEEEEe-CCCcEEEEEcCCC
Q psy13207 156 VWRVSWNITGTIVASSG-DDGCVRLWKLKKK 185 (197)
Q Consensus 156 v~~~~~~p~~~~l~~~~-~dg~i~iw~~~~~ 185 (197)
...+.++|||++++.++ .+.++.++|+++.
T Consensus 325 PHGv~vsPDGkyi~v~GKLsptvtV~d~~k~ 355 (638)
T 3sbq_A 325 PHGCNTSSDGKYFIAAGKLSPTCSMIAIDKL 355 (638)
T ss_dssp CCCEEECTTSCEEEEECTTSSBEEEEEGGGH
T ss_pred CcceeeCCCCCEEEEcCCCCCeEEEEEeehh
Confidence 35688999999998876 6889999999853
No 356
>3ei3_A DNA damage-binding protein 1; UV-damage, DDB, nucleotide excision repair, xeroderma pigmentosum, cytoplasm, DNA repair; HET: DNA PG4; 2.30A {Homo sapiens} PDB: 3ei1_A* 3ei2_A* 3ei4_A* 4a0l_A* 3e0c_A* 3i7k_A* 3i7h_A* 3i7l_A* 3i7n_A* 3i7o_A* 3i7p_A* 3i89_A* 3i8c_A* 3i8e_A* 2b5l_A 2b5m_A 2hye_A* 4a11_A* 4a0k_C* 4a0a_A* ...
Probab=26.23 E-value=3.3e+02 Score=23.87 Aligned_cols=36 Identities=22% Similarity=0.171 Sum_probs=27.9
Q ss_pred CcceeEEEECCCC----CCcEEEEEeC-CCcEEEEEcCCcc
Q psy13207 25 RTSVTDVKFGPKQ----LGLVLATCAA-DGLVRIYEAPDVM 60 (197)
Q Consensus 25 ~~~v~~~~~~~~~----~~~~l~s~~~-dg~v~iw~~~~~~ 60 (197)
...|.|+++.|.+ .+.+++.|.. |++++|+++.+.+
T Consensus 553 ~~evscl~i~~~~~~~~~s~~~aVg~~~d~tv~I~sL~~l~ 593 (1158)
T 3ei3_A 553 EHEVACLDITPLGDSNGLSPLCAIGLWTDISARILKLPSFE 593 (1158)
T ss_dssp SSCEEEEECCCCSSSTTCCSEEEEEETTTTEEEEEETTTCC
T ss_pred CCceEEEEeecCCCCcccccEEEEEECCCCEEEEEECCCCC
Confidence 4579999998642 1368999986 9999999998643
No 357
>3zwu_A Alkaline phosphatase PHOX; hydrolase, beta-propeller, iron; 1.39A {Pseudomonas fluorescens}
Probab=24.22 E-value=2.8e+02 Score=22.24 Aligned_cols=19 Identities=16% Similarity=0.193 Sum_probs=15.9
Q ss_pred eecEEEEEEccCCCEEEEE
Q psy13207 153 YCTVWRVSWNITGTIVASS 171 (197)
Q Consensus 153 ~~~v~~~~~~p~~~~l~~~ 171 (197)
...++.++|+||++.|...
T Consensus 530 gaE~TG~~fspDg~tlfvn 548 (592)
T 3zwu_A 530 GCEVTGISFSPDQKTLFVG 548 (592)
T ss_dssp TCEEEEEEECTTSSEEEEE
T ss_pred CccCcCeeECCCCCEEEEE
Confidence 4678999999999887765
No 358
>2woz_A Kelch repeat and BTB domain-containing protein 10; protein binding, invasion and metastasis, UBL conjugation pathway, UBL protein folding; 2.00A {Rattus norvegicus}
Probab=24.18 E-value=1.9e+02 Score=20.25 Aligned_cols=59 Identities=15% Similarity=0.163 Sum_probs=30.2
Q ss_pred CeEEEEEccCCcccceeeeeeecCceecEEEEEEccCCCEEEEEeCC-----CcEEEEEcCCCcchhhhh
Q psy13207 128 QNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDD-----GCVRLWKLKKKRKKKKEE 192 (197)
Q Consensus 128 ~~i~~~d~~~~~~~~~~~~~~~~~h~~~v~~~~~~p~~~~l~~~~~d-----g~i~iw~~~~~~~~~~~~ 192 (197)
..+.+||..+.+ ...+..+......-..+.+ ++++++.|+.+ ..+.+||+.+ ..|..+.
T Consensus 175 ~~~~~yd~~~~~---W~~~~~~p~~r~~~~~~~~--~~~iyv~GG~~~~~~~~~~~~yd~~~-~~W~~~~ 238 (318)
T 2woz_A 175 NRVFIYNPKKGD---WKDLAPMKTPRSMFGVAIH--KGKIVIAGGVTEDGLSASVEAFDLKT-NKWEVMT 238 (318)
T ss_dssp CCEEEEETTTTE---EEEECCCSSCCBSCEEEEE--TTEEEEEEEEETTEEEEEEEEEETTT-CCEEECC
T ss_pred ceEEEEcCCCCE---EEECCCCCCCcccceEEEE--CCEEEEEcCcCCCCccceEEEEECCC-CeEEECC
Confidence 357888887632 2233222211111122222 57777777654 3467788866 3465543
No 359
>1zso_A Hypothetical protein; structural genomics, PSI, protein structure initiative, STRU genomics of pathogenic protozoa consortium, SGPP; 2.17A {Plasmodium falciparum} SCOP: b.166.1.1
Probab=21.73 E-value=75 Score=20.58 Aligned_cols=37 Identities=5% Similarity=-0.029 Sum_probs=23.4
Q ss_pred EEEEEEccCCCEEEEEeCCCcEEEEEcCCCcchhhhhh
Q psy13207 156 VWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193 (197)
Q Consensus 156 v~~~~~~p~~~~l~~~~~dg~i~iw~~~~~~~~~~~~~ 193 (197)
+-=+.|.|++.+.+.+...|...=.|+.. +.|..+.+
T Consensus 112 lEp~eF~p~~~w~a~~~esG~f~dvDLse-~eW~DYDE 148 (164)
T 1zso_A 112 IELIDFFPSNNFIVEDTKGKLYYDVNLSD-QNWCDYNE 148 (164)
T ss_dssp EEEEEECCCSCEEEEETTSCEEEEECCTT-SCEEEEET
T ss_pred eeeEEEecCCcEEEEECCCCcEEeeecCC-Cceecccc
Confidence 44488999999999887667332344432 35665543
Done!