Your job contains 1 sequence.
>psy13207
MGPSPLQSEKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVM
NLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLR
MATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW
KLKKKRKKKKEEEEEEN
The BLAST search returned 2 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13207
(197 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
UNIPROTKB|Q5RAN6 - symbol:SEH1L "Nucleoporin SEH1" specie... 307 5.9e-44 2
UNIPROTKB|Q96EE3 - symbol:SEH1L "Nucleoporin SEH1" specie... 307 7.6e-44 2
UNIPROTKB|I3LR40 - symbol:SEH1L "Uncharacterized protein"... 302 7.6e-44 2
UNIPROTKB|E1BYP7 - symbol:SEH1L "Uncharacterized protein"... 305 1.2e-43 2
UNIPROTKB|A7YY75 - symbol:SEH1L "Nucleoporin SEH1" specie... 304 1.6e-43 2
MGI|MGI:1919374 - symbol:Seh1l "SEH1-like (S. cerevisiae"... 302 2.5e-43 2
UNIPROTKB|Q5U4Y8 - symbol:seh1l "Nucleoporin seh1" specie... 304 4.1e-43 2
UNIPROTKB|Q4FZW5 - symbol:seh1l-a "Nucleoporin seh1-A" sp... 304 4.1e-43 2
UNIPROTKB|Q6GNF1 - symbol:seh1l-b "Nucleoporin seh1-B" sp... 304 2.2e-42 2
ZFIN|ZDB-GENE-030131-6689 - symbol:seh1l "SEH1-like (S. c... 297 5.9e-42 2
UNIPROTKB|C1BK83 - symbol:seh1l "Nucleoporin seh1" specie... 308 7.5e-42 2
FB|FBgn0033247 - symbol:Nup44A "Nucleoporin at 44A" speci... 266 6.4e-37 2
DICTYBASE|DDB_G0277257 - symbol:DDB_G0277257 "Nucleoporin... 221 1.0e-30 2
POMBASE|SPAC15F9.02 - symbol:seh1 "nucleoporin Seh1" spec... 152 1.0e-21 2
SGD|S000003068 - symbol:SEH1 "Component of two distinct c... 146 1.9e-19 2
CGD|CAL0005451 - symbol:orf19.2186 species:5476 "Candida ... 148 3.5e-18 2
UNIPROTKB|Q5A2S9 - symbol:SEH1 "Putative uncharacterized ... 148 3.5e-18 2
WB|WBGene00003804 - symbol:npp-18 species:6239 "Caenorhab... 206 2.7e-16 1
ASPGD|ASPL0000075365 - symbol:sec13 species:162425 "Emeri... 163 1.0e-11 1
CGD|CAL0004667 - symbol:SEC13 species:5476 "Candida albic... 161 1.5e-11 1
POMBASE|SPBC215.15 - symbol:sec13 "COPII-coated vesicle c... 160 2.0e-11 1
SGD|S000004198 - symbol:SEC13 "Structural component of 3 ... 159 2.5e-11 1
UNIPROTKB|F1SQA9 - symbol:SEC13 "Uncharacterized protein"... 150 9.4e-11 1
DICTYBASE|DDB_G0292052 - symbol:sec13 "putative transport... 140 1.9e-10 2
MGI|MGI:99832 - symbol:Sec13 "SEC13 homolog (S. cerevisia... 152 2.0e-10 1
UNIPROTKB|E1BVC4 - symbol:SEC13 "Uncharacterized protein"... 150 3.3e-10 1
UNIPROTKB|F1PDM3 - symbol:SEC13 "Uncharacterized protein"... 150 3.3e-10 1
RGD|1359555 - symbol:Sec13 "SEC13 homolog (S. cerevisiae)... 150 3.3e-10 1
UNIPROTKB|P55735 - symbol:SEC13 "Protein SEC13 homolog" s... 150 3.3e-10 1
ZFIN|ZDB-GENE-040426-2649 - symbol:sec13 "SEC13 homolog (... 149 4.2e-10 1
UNIPROTKB|Q3ZCC9 - symbol:SEC13 "Protein SEC13 homolog" s... 149 4.3e-10 1
TAIR|locus:2045648 - symbol:AT2G30050 "AT2G30050" species... 145 1.0e-09 1
TAIR|locus:2100267 - symbol:AT3G01340 "AT3G01340" species... 139 4.7e-09 1
FB|FBgn0024509 - symbol:Sec13 "Sec13 ortholog (S. cerevis... 141 4.9e-09 1
TAIR|locus:2014210 - symbol:SEH1H "AT1G64350" species:370... 99 3.6e-08 2
UNIPROTKB|B3RNR8 - symbol:TRIADDRAFT_20668 "Probable cyto... 132 6.1e-08 1
UNIPROTKB|B5X9P2 - symbol:ciao1a "Probable cytosolic iron... 127 9.7e-07 1
MGI|MGI:2441730 - symbol:Tbl1xr1 "transducin (beta)-like ... 127 2.1e-06 1
RGD|1560053 - symbol:Tbl1xr1 "transducin (beta)-like 1 X-... 127 2.1e-06 1
UNIPROTKB|Q28DW0 - symbol:ciao1 "Probable cytosolic iron-... 125 2.3e-06 1
UNIPROTKB|Q5DFU0 - symbol:Q5DFU0 "Probable cytosolic iron... 120 4.2e-06 2
ZFIN|ZDB-GENE-040426-839 - symbol:ciao1 "cytosolic iron-s... 123 4.7e-06 1
ZFIN|ZDB-GENE-040426-1192 - symbol:tbl1xr1 "transducin (b... 124 6.6e-06 1
WB|WBGene00003806 - symbol:npp-20 species:6239 "Caenorhab... 121 7.9e-06 1
UNIPROTKB|Q9N4A7 - symbol:npp-20 "Protein SEC13 homolog" ... 121 7.9e-06 1
UNIPROTKB|B5X212 - symbol:ciao1b "Probable cytosolic iron... 120 1.3e-05 1
UNIPROTKB|A8XJ40 - symbol:npp-20 "Protein SEC13 homolog" ... 119 1.5e-05 1
UNIPROTKB|E3NCB9 - symbol:Cre-npp-20 "CRE-NPP-20 protein"... 119 1.5e-05 1
UNIPROTKB|Q9BZK7 - symbol:TBL1XR1 "F-box-like/WD repeat-c... 120 2.7e-05 1
UNIPROTKB|F1SGD0 - symbol:TBL1XR1 "Uncharacterized protei... 120 2.7e-05 1
UNIPROTKB|F1NYZ8 - symbol:TBL1XR1 "Uncharacterized protei... 120 2.7e-05 1
UNIPROTKB|Q4R8H1 - symbol:TBL1X "F-box-like/WD repeat-con... 120 3.1e-05 1
UNIPROTKB|F1MFJ6 - symbol:TBL1XR1 "Uncharacterized protei... 117 6.9e-05 1
UNIPROTKB|O60907 - symbol:TBL1X "F-box-like/WD repeat-con... 117 8.1e-05 1
TAIR|locus:2123752 - symbol:AT4G32990 "AT4G32990" species... 113 0.00011 1
UNIPROTKB|E1BV27 - symbol:TBL1X "Uncharacterized protein"... 115 0.00013 1
MGI|MGI:1336172 - symbol:Tbl1x "transducin (beta)-like 1 ... 115 0.00013 1
RGD|1563868 - symbol:Tbl1x "transducin (beta)-like 1 X-li... 115 0.00013 1
UNIPROTKB|B7TCI5 - symbol:TBL1X "Transducin beta-like 1" ... 115 0.00013 1
UNIPROTKB|B8YE10 - symbol:TBL1Y "Transducin (Beta)-like 1... 114 0.00017 1
UNIPROTKB|Q9BQ87 - symbol:TBL1Y "F-box-like/WD repeat-con... 113 0.00023 1
UNIPROTKB|A5PKH9 - symbol:WDR51B "Uncharacterized protein... 112 0.00028 1
UNIPROTKB|F1P8S8 - symbol:POC1B "Uncharacterized protein"... 112 0.00028 1
UNIPROTKB|Q32PJ6 - symbol:CIAO1 "Probable cytosolic iron-... 110 0.00029 1
TAIR|locus:2057381 - symbol:emb1345 "AT2G26060" species:3... 110 0.00031 1
SGD|S000000653 - symbol:PWP2 "Conserved 90S pre-ribosomal... 112 0.00067 1
RGD|1307285 - symbol:Ciao1 "cytosolic iron-sulfur protein... 107 0.00069 1
>UNIPROTKB|Q5RAN6 [details] [associations]
symbol:SEH1L "Nucleoporin SEH1" species:9601 "Pongo abelii"
[GO:0006999 "nuclear pore organization" evidence=ISS] [GO:0007080
"mitotic metaphase plate congression" evidence=ISS] [GO:0031080
"nuclear pore outer ring" evidence=ISS] [GO:0051315 "attachment of
spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=ISS] [GO:0000776 "kinetochore"
evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 CTD:81929 KO:K14299
HOGENOM:HOG000216896 EMBL:CR858979 RefSeq:NP_001125688.1
UniGene:Pab.10091 ProteinModelPortal:Q5RAN6 PRIDE:Q5RAN6
GeneID:100172610 KEGG:pon:100172610 InParanoid:Q5RAN6
Uniprot:Q5RAN6
Length = 360
Score = 307 (113.1 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
Identities = 59/96 (61%), Positives = 74/96 (77%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHK 106
C SC++WN S SR +S I++ + S NA K
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNAMAK 196
Score = 181 (68.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 39/89 (43%), Positives = 56/89 (62%)
Query: 95 MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKV-TRDVMGTRFDIETIGNFEDHY 153
M+ A SI A+HKDLIHDV++D++G RMATCSSDQ++KV + G D +++ H
Sbjct: 1 MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESG---DWHCTASWKTHS 57
Query: 154 CTVWRVSWNIT--GTIVASSGDDGCVRLW 180
+VWRV+W G ++AS D +W
Sbjct: 58 GSVWRVTWAHPEFGQVLASCSFDRTAAVW 86
Score = 173 (66.0 bits), Expect = 5.9e-44, Sum P(2) = 5.9e-44
Identities = 28/42 (66%), Positives = 36/42 (85%)
Query: 139 TRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
T+F+I + +F++H VWRVSWNITGT++ASSGDDGCVRLW
Sbjct: 264 TKFEIHIVAHFDNHNSQVWRVSWNITGTVLASSGDDGCVRLW 305
Score = 47 (21.6 bits), Expect = 4.4e-19, Sum P(3) = 4.4e-19
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 109 IHDVAY--DYYGLRMATCSSDQNIKVTR--DVM 137
+ DV + + GL +ATCS+D +++ DVM
Sbjct: 116 VTDVKFAPKHMGLMLATCSADGIVRIYEAPDVM 148
Score = 47 (21.6 bits), Expect = 4.4e-19, Sum P(3) = 4.4e-19
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 18 RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYE 55
RS D + + DV F G +ATC++D V++++
Sbjct: 5 RSIAADHKDLIHDVSFDFH--GRRMATCSSDQSVKVWD 40
Score = 45 (20.9 bits), Expect = 7.0e-19, Sum P(3) = 7.0e-19
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 113 AYDYYGLRMATCSSDQNIKVTRDVMGTRFD 142
A+ +G +A+CS D+ V +++G D
Sbjct: 66 AHPEFGQVLASCSFDRTAAVWEEIVGESND 95
Score = 44 (20.5 bits), Expect = 8.9e-19, Sum P(3) = 8.9e-19
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 27 SVTDVKFGPKQLGLVLATCAADGLVRIYE 55
SV V + + G VLA+C+ D ++E
Sbjct: 59 SVWRVTWAHPEFGQVLASCSFDRTAAVWE 87
>UNIPROTKB|Q96EE3 [details] [associations]
symbol:SEH1L "Nucleoporin SEH1" species:9606 "Homo sapiens"
[GO:0015031 "protein transport" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0051301 "cell division" evidence=IEA]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
[GO:0006999 "nuclear pore organization" evidence=IMP] [GO:0031080
"nuclear pore outer ring" evidence=NAS;IDA] [GO:0051315 "attachment
of spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=IMP] [GO:0007080 "mitotic metaphase
plate congression" evidence=IMP] [GO:0000776 "kinetochore"
evidence=IDA] [GO:0000087 "M phase of mitotic cell cycle"
evidence=TAS] [GO:0000236 "mitotic prometaphase" evidence=TAS]
[GO:0000278 "mitotic cell cycle" evidence=TAS] [GO:0005635 "nuclear
envelope" evidence=TAS] [GO:0005829 "cytosol" evidence=TAS]
[GO:0005975 "carbohydrate metabolic process" evidence=TAS]
[GO:0008645 "hexose transport" evidence=TAS] [GO:0010827
"regulation of glucose transport" evidence=TAS] [GO:0015758
"glucose transport" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0019221 "cytokine-mediated signaling pathway"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0055085 "transmembrane transport" evidence=TAS]
Reactome:REACT_111217 Reactome:REACT_15518 InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005829 Reactome:REACT_116125
Reactome:REACT_6900 Reactome:REACT_115566 GO:GO:0016032
Reactome:REACT_21300 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0044281 GO:GO:0015031
GO:GO:0005975 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0019221 GO:GO:0015758 GO:GO:0010827 GO:GO:0055085
GO:GO:0051028 GO:GO:0051315 GO:GO:0000236 GO:GO:0000777
GO:GO:0007080 GO:GO:0031080 GO:GO:0006999 CTD:81929 KO:K14299
HOGENOM:HOG000216896 OMA:YEAPDIM EMBL:AF255625 EMBL:AF431970
EMBL:AF514996 EMBL:AF136976 EMBL:AK056940 EMBL:AK291226
EMBL:BC012430 IPI:IPI00185533 IPI:IPI00220609 RefSeq:NP_001013455.1
RefSeq:NP_112493.2 UniGene:Hs.301048 ProteinModelPortal:Q96EE3
SMR:Q96EE3 IntAct:Q96EE3 STRING:Q96EE3 DMDM:257051064 PaxDb:Q96EE3
PRIDE:Q96EE3 DNASU:81929 Ensembl:ENST00000262124
Ensembl:ENST00000399892 GeneID:81929 KEGG:hsa:81929 UCSC:uc002krq.3
UCSC:uc002krr.3 GeneCards:GC18P012947 HGNC:HGNC:30379 HPA:HPA039964
MIM:609263 neXtProt:NX_Q96EE3 PharmGKB:PA134912135
InParanoid:Q96EE3 OrthoDB:EOG4DJJWR PhylomeDB:Q96EE3 ChiTaRS:SEH1L
GenomeRNAi:81929 NextBio:72265 Bgee:Q96EE3 CleanEx:HS_SEH1L
Genevestigator:Q96EE3 GermOnline:ENSG00000085415 Uniprot:Q96EE3
Length = 360
Score = 307 (113.1 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 59/96 (61%), Positives = 74/96 (77%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHK 106
C SC++WN S SR +S I++ + S NA K
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNAMAK 196
Score = 181 (68.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 39/89 (43%), Positives = 56/89 (62%)
Query: 95 MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKV-TRDVMGTRFDIETIGNFEDHY 153
M+ A SI A+HKDLIHDV++D++G RMATCSSDQ++KV + G D +++ H
Sbjct: 1 MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESG---DWHCTASWKTHS 57
Query: 154 CTVWRVSWNIT--GTIVASSGDDGCVRLW 180
+VWRV+W G ++AS D +W
Sbjct: 58 GSVWRVTWAHPEFGQVLASCSFDRTAAVW 86
Score = 172 (65.6 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 139 TRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
T+F+I + F++H VWRVSWNITGT++ASSGDDGCVRLW
Sbjct: 264 TKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLW 305
Score = 47 (21.6 bits), Expect = 5.7e-19, Sum P(3) = 5.7e-19
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 109 IHDVAY--DYYGLRMATCSSDQNIKVTR--DVM 137
+ DV + + GL +ATCS+D +++ DVM
Sbjct: 116 VTDVKFAPKHMGLMLATCSADGIVRIYEAPDVM 148
Score = 47 (21.6 bits), Expect = 5.7e-19, Sum P(3) = 5.7e-19
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 18 RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYE 55
RS D + + DV F G +ATC++D V++++
Sbjct: 5 RSIAADHKDLIHDVSFDFH--GRRMATCSSDQSVKVWD 40
Score = 45 (20.9 bits), Expect = 9.1e-19, Sum P(3) = 9.1e-19
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 113 AYDYYGLRMATCSSDQNIKVTRDVMGTRFD 142
A+ +G +A+CS D+ V +++G D
Sbjct: 66 AHPEFGQVLASCSFDRTAAVWEEIVGESND 95
Score = 44 (20.5 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 27 SVTDVKFGPKQLGLVLATCAADGLVRIYE 55
SV V + + G VLA+C+ D ++E
Sbjct: 59 SVWRVTWAHPEFGQVLASCSFDRTAAVWE 87
>UNIPROTKB|I3LR40 [details] [associations]
symbol:SEH1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051315 "attachment of spindle microtubules to
kinetochore involved in mitotic sister chromatid segregation"
evidence=IEA] [GO:0007080 "mitotic metaphase plate congression"
evidence=IEA] [GO:0006999 "nuclear pore organization" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 GO:GO:0051315 GO:GO:0007080 GO:GO:0006999
GeneTree:ENSGT00550000074999 OMA:YEAPDIM EMBL:FP565312
Ensembl:ENSSSCT00000023051 Uniprot:I3LR40
Length = 324
Score = 302 (111.4 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 54/76 (71%), Positives = 64/76 (84%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHEV+
Sbjct: 64 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEVS 123
Query: 73 CPTLASCLTWNHSFSR 88
C SC++WN S SR
Sbjct: 124 CKLSCSCISWNPSSSR 139
Score = 177 (67.4 bits), Expect = 7.6e-44, Sum P(2) = 7.6e-44
Identities = 33/71 (46%), Positives = 46/71 (64%)
Query: 110 HDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVA 169
H +A +R+ T ++T T+F+I+ + F++H VWRVSWNITGT++A
Sbjct: 199 HILAIATKDVRIFTLKPVSRKELTSSGGPTKFEIQVVAQFDNHNSQVWRVSWNITGTVLA 258
Query: 170 SSGDDGCVRLW 180
SSGDDGCVRLW
Sbjct: 259 SSGDDGCVRLW 269
Score = 44 (20.5 bits), Expect = 4.7e-16, Sum P(2) = 4.7e-16
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 27 SVTDVKFGPKQLGLVLATCAADGLVRIYE 55
SV V + + G VLA+C+ D ++E
Sbjct: 22 SVWRVTWAHPEFGQVLASCSFDRTAAVWE 50
>UNIPROTKB|E1BYP7 [details] [associations]
symbol:SEH1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000776 "kinetochore" evidence=IEA] [GO:0006999
"nuclear pore organization" evidence=IEA] [GO:0007080 "mitotic
metaphase plate congression" evidence=IEA] [GO:0051315 "attachment
of spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051315
GO:GO:0007080 GO:GO:0006999 CTD:81929 KO:K14299
GeneTree:ENSGT00550000074999 OMA:YEAPDIM EMBL:AADN02058864
IPI:IPI00575685 RefSeq:XP_003640847.1 Ensembl:ENSGALT00000022497
GeneID:100859886 KEGG:gga:100859886 Uniprot:E1BYP7
Length = 419
Score = 305 (112.4 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 59/101 (58%), Positives = 77/101 (76%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHKDLIHD 111
C SC++WN S SR +S I++ + +S N K I++
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDNSPNILAKVQIYE 201
Score = 177 (67.4 bits), Expect = 6.9e-13, P = 6.9e-13
Identities = 38/88 (43%), Positives = 55/88 (62%)
Query: 95 MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC 154
M+ A SI A+H+DLIHDV++D++G RMATCSSDQ++KV D D +++ H
Sbjct: 1 MFVARSIAADHRDLIHDVSFDFHGRRMATCSSDQSVKVW-D-KSENGDWHCTASWKTHSG 58
Query: 155 TVWRVSWNIT--GTIVASSGDDGCVRLW 180
+VWRV+W G ++AS D +W
Sbjct: 59 SVWRVTWAHPEFGQVLASCSFDRTAAVW 86
Score = 172 (65.6 bits), Expect = 1.2e-43, Sum P(2) = 1.2e-43
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 139 TRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
T+F+I + F++H VWRVSWNITGT++ASSGDDGCVRLW
Sbjct: 264 TKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLW 305
Score = 50 (22.7 bits), Expect = 8.5e-19, Sum P(3) = 8.5e-19
Identities = 13/38 (34%), Positives = 21/38 (55%)
Query: 18 RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYE 55
RS D R + DV F G +ATC++D V++++
Sbjct: 5 RSIAADHRDLIHDVSFDFH--GRRMATCSSDQSVKVWD 40
Score = 47 (21.6 bits), Expect = 8.5e-19, Sum P(3) = 8.5e-19
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 109 IHDVAY--DYYGLRMATCSSDQNIKVTR--DVM 137
+ DV + + GL +ATCS+D +++ DVM
Sbjct: 116 VTDVKFAPKHMGLMLATCSADGVVRIYEAPDVM 148
Score = 45 (20.9 bits), Expect = 1.4e-18, Sum P(3) = 1.4e-18
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 113 AYDYYGLRMATCSSDQNIKVTRDVMGTRFD 142
A+ +G +A+CS D+ V +++G D
Sbjct: 66 AHPEFGQVLASCSFDRTAAVWEEIVGESND 95
Score = 44 (20.5 bits), Expect = 3.5e-18, Sum P(3) = 3.5e-18
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 27 SVTDVKFGPKQLGLVLATCAADGLVRIYE 55
SV V + + G VLA+C+ D ++E
Sbjct: 59 SVWRVTWAHPEFGQVLASCSFDRTAAVWE 87
>UNIPROTKB|A7YY75 [details] [associations]
symbol:SEH1L "Nucleoporin SEH1" species:9913 "Bos taurus"
[GO:0000776 "kinetochore" evidence=ISS] [GO:0007080 "mitotic
metaphase plate congression" evidence=ISS] [GO:0051315 "attachment
of spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=ISS] [GO:0031080 "nuclear pore
outer ring" evidence=ISS] [GO:0006999 "nuclear pore organization"
evidence=ISS] [GO:0000777 "condensed chromosome kinetochore"
evidence=IEA] [GO:0051301 "cell division" evidence=IEA] [GO:0051028
"mRNA transport" evidence=IEA] [GO:0015031 "protein transport"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 CTD:81929 KO:K14299 EMBL:BC151606
IPI:IPI00839665 RefSeq:NP_001096559.1 UniGene:Bt.103393
ProteinModelPortal:A7YY75 STRING:A7YY75 Ensembl:ENSBTAT00000049050
GeneID:506509 KEGG:bta:506509 eggNOG:NOG257251
GeneTree:ENSGT00550000074999 HOGENOM:HOG000216896 OMA:YEAPDIM
NextBio:20867635 ArrayExpress:A7YY75 Uniprot:A7YY75
Length = 360
Score = 304 (112.1 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 58/96 (60%), Positives = 74/96 (77%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHK 106
C SC++WN S SR ++ I++ + S NA K
Sbjct: 161 CKLSCSCISWNPSSSRAHAPMIAVGSDDSSPNAMAK 196
Score = 177 (67.4 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 38/89 (42%), Positives = 56/89 (62%)
Query: 95 MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKV-TRDVMGTRFDIETIGNFEDHY 153
M+ A SI A+HKDLIHDV++D++G RMATCSSDQ++KV + G + +++ H
Sbjct: 1 MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESG---EWHCTASWKTHS 57
Query: 154 CTVWRVSWNIT--GTIVASSGDDGCVRLW 180
+VWRV+W G ++AS D +W
Sbjct: 58 GSVWRVTWAHPEFGQVLASCSFDRTAAVW 86
Score = 172 (65.6 bits), Expect = 1.6e-43, Sum P(2) = 1.6e-43
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 139 TRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
T+F+I + F++H VWRVSWNITGT++ASSGDDGCVRLW
Sbjct: 264 TKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLW 305
Score = 47 (21.6 bits), Expect = 5.7e-19, Sum P(3) = 5.7e-19
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 109 IHDVAY--DYYGLRMATCSSDQNIKVTR--DVM 137
+ DV + + GL +ATCS+D +++ DVM
Sbjct: 116 VTDVKFAPKHMGLMLATCSADGIVRIYEAPDVM 148
Score = 47 (21.6 bits), Expect = 5.7e-19, Sum P(3) = 5.7e-19
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 18 RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYE 55
RS D + + DV F G +ATC++D V++++
Sbjct: 5 RSIAADHKDLIHDVSFDFH--GRRMATCSSDQSVKVWD 40
Score = 45 (20.9 bits), Expect = 9.1e-19, Sum P(3) = 9.1e-19
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 113 AYDYYGLRMATCSSDQNIKVTRDVMGTRFD 142
A+ +G +A+CS D+ V +++G D
Sbjct: 66 AHPEFGQVLASCSFDRTAAVWEEIVGESND 95
Score = 44 (20.5 bits), Expect = 1.1e-18, Sum P(3) = 1.1e-18
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 27 SVTDVKFGPKQLGLVLATCAADGLVRIYE 55
SV V + + G VLA+C+ D ++E
Sbjct: 59 SVWRVTWAHPEFGQVLASCSFDRTAAVWE 87
>MGI|MGI:1919374 [details] [associations]
symbol:Seh1l "SEH1-like (S. cerevisiae" species:10090 "Mus
musculus" [GO:0000775 "chromosome, centromeric region"
evidence=IEA] [GO:0000776 "kinetochore" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA] [GO:0005694
"chromosome" evidence=IEA] [GO:0006810 "transport" evidence=IEA]
[GO:0006999 "nuclear pore organization" evidence=ISO] [GO:0007049
"cell cycle" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0007080
"mitotic metaphase plate congression" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0031080 "nuclear pore outer
ring" evidence=ISO] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0051315 "attachment
of spindle microtubules to kinetochore involved in mitotic sister
chromatid segregation" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 MGI:MGI:1919374 GO:GO:0051301
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 EMBL:CH466528
GO:GO:0015031 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 CTD:81929 KO:K14299
GeneTree:ENSGT00550000074999 HOGENOM:HOG000216896 OMA:YEAPDIM
OrthoDB:EOG4DJJWR ChiTaRS:SEH1L EMBL:AK011330 EMBL:AK088835
EMBL:AK143727 EMBL:AK166573 EMBL:AK169231 EMBL:AK169388
EMBL:AK170591 EMBL:BC027244 IPI:IPI00315517 IPI:IPI00406514
RefSeq:NP_001034177.1 RefSeq:NP_082388.1 UniGene:Mm.307315
ProteinModelPortal:Q8R2U0 SMR:Q8R2U0 STRING:Q8R2U0
PhosphoSite:Q8R2U0 PaxDb:Q8R2U0 PRIDE:Q8R2U0
Ensembl:ENSMUST00000025421 GeneID:72124 KEGG:mmu:72124
UCSC:uc008fmx.1 UCSC:uc008fmy.1 InParanoid:Q3UP79 NextBio:335500
Bgee:Q8R2U0 Genevestigator:Q8R2U0 Uniprot:Q8R2U0
Length = 360
Score = 302 (111.4 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 53/76 (69%), Positives = 64/76 (84%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VR+YEAPDVMNLSQW LQHEV+
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGIVRVYEAPDVMNLSQWSLQHEVS 160
Query: 73 CPTLASCLTWNHSFSR 88
C SC++WN S SR
Sbjct: 161 CKLCCSCISWNPSSSR 176
Score = 181 (68.8 bits), Expect = 1.7e-13, P = 1.7e-13
Identities = 39/89 (43%), Positives = 56/89 (62%)
Query: 95 MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKV-TRDVMGTRFDIETIGNFEDHY 153
M+ A SI A+HKDLIHDV++D++G RMATCSSDQ++KV + G D +++ H
Sbjct: 1 MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSESG---DWHCTASWKTHS 57
Query: 154 CTVWRVSWNIT--GTIVASSGDDGCVRLW 180
+VWRV+W G ++AS D +W
Sbjct: 58 GSVWRVTWAHPEFGQVLASCSFDRTAAVW 86
Score = 172 (65.6 bits), Expect = 2.5e-43, Sum P(2) = 2.5e-43
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 139 TRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
T+F+I + F++H VWRVSWNITGT++ASSGDDGCVRLW
Sbjct: 264 TKFEIHIVAQFDNHNSQVWRVSWNITGTVLASSGDDGCVRLW 305
Score = 48 (22.0 bits), Expect = 4.5e-19, Sum P(3) = 4.5e-19
Identities = 13/33 (39%), Positives = 20/33 (60%)
Query: 109 IHDVAY--DYYGLRMATCSSDQNIKVTR--DVM 137
+ DV + + GL +ATCS+D ++V DVM
Sbjct: 116 VTDVKFAPKHMGLMLATCSADGIVRVYEAPDVM 148
Score = 47 (21.6 bits), Expect = 4.5e-19, Sum P(3) = 4.5e-19
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 18 RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYE 55
RS D + + DV F G +ATC++D V++++
Sbjct: 5 RSIAADHKDLIHDVSFDFH--GRRMATCSSDQSVKVWD 40
Score = 45 (20.9 bits), Expect = 9.1e-19, Sum P(3) = 9.1e-19
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 113 AYDYYGLRMATCSSDQNIKVTRDVMGTRFD 142
A+ +G +A+CS D+ V +++G D
Sbjct: 66 AHPEFGQVLASCSFDRTAAVWEEIVGESND 95
Score = 44 (20.5 bits), Expect = 9.1e-19, Sum P(3) = 9.1e-19
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 27 SVTDVKFGPKQLGLVLATCAADGLVRIYE 55
SV V + + G VLA+C+ D ++E
Sbjct: 59 SVWRVTWAHPEFGQVLASCSFDRTAAVWE 87
>UNIPROTKB|Q5U4Y8 [details] [associations]
symbol:seh1l "Nucleoporin seh1" species:8364 "Xenopus
(Silurana) tropicalis" [GO:0006999 "nuclear pore organization"
evidence=ISS] [GO:0007080 "mitotic metaphase plate congression"
evidence=ISS] [GO:0031080 "nuclear pore outer ring" evidence=ISS]
[GO:0051315 "attachment of spindle microtubules to kinetochore
involved in mitotic sister chromatid segregation" evidence=ISS]
[GO:0000776 "kinetochore" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0015031 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0051028 GO:GO:0051315
GO:GO:0000777 GO:GO:0007080 GO:GO:0031080 GO:GO:0006999 CTD:81929
KO:K14299 GeneTree:ENSGT00550000074999 HOGENOM:HOG000216896
OMA:YEAPDIM OrthoDB:EOG4DJJWR EMBL:CR855721 EMBL:BC084902
RefSeq:NP_001011152.1 UniGene:Str.2999 ProteinModelPortal:Q5U4Y8
STRING:Q5U4Y8 Ensembl:ENSXETT00000055056 GeneID:496570
KEGG:xtr:496570 Xenbase:XB-GENE-1015661 InParanoid:Q5U4Y8
Bgee:Q5U4Y8 Uniprot:Q5U4Y8
Length = 360
Score = 304 (112.1 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 59/101 (58%), Positives = 76/101 (75%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHKDLIHD 111
C SC++WN S SR +S I++ + S N K I++
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNIMGKVQIYE 201
Score = 180 (68.4 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 39/88 (44%), Positives = 55/88 (62%)
Query: 95 MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC 154
M+ A SI A+HKDLIHDV++D++G RMATCSSDQ++KV D D +++ H
Sbjct: 1 MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVW-D-KSENGDWHCTASWKTHSG 58
Query: 155 TVWRVSWNIT--GTIVASSGDDGCVRLW 180
+VWRV+W G ++AS D +W
Sbjct: 59 SVWRVTWAHPEFGQVLASCSFDRTAAVW 86
Score = 168 (64.2 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 139 TRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
T+F+I T+ F++H VWRVSWNITGT++ASSGDDG VRLW
Sbjct: 264 TKFEIHTVAQFDNHNSQVWRVSWNITGTVLASSGDDGTVRLW 305
Score = 47 (21.6 bits), Expect = 1.7e-18, Sum P(3) = 1.7e-18
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 109 IHDVAY--DYYGLRMATCSSDQNIKVTR--DVM 137
+ DV + + GL +ATCS+D +++ DVM
Sbjct: 116 VTDVKFAPKHMGLMLATCSADGVVRIYEAPDVM 148
Score = 47 (21.6 bits), Expect = 1.7e-18, Sum P(3) = 1.7e-18
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 18 RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYE 55
RS D + + DV F G +ATC++D V++++
Sbjct: 5 RSIAADHKDLIHDVSFDFH--GRRMATCSSDQSVKVWD 40
Score = 45 (20.9 bits), Expect = 2.7e-18, Sum P(3) = 2.7e-18
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 113 AYDYYGLRMATCSSDQNIKVTRDVMGTRFD 142
A+ +G +A+CS D+ V +++G D
Sbjct: 66 AHPEFGQVLASCSFDRTAAVWEEIVGESND 95
Score = 44 (20.5 bits), Expect = 3.4e-18, Sum P(3) = 3.4e-18
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 27 SVTDVKFGPKQLGLVLATCAADGLVRIYE 55
SV V + + G VLA+C+ D ++E
Sbjct: 59 SVWRVTWAHPEFGQVLASCSFDRTAAVWE 87
>UNIPROTKB|Q4FZW5 [details] [associations]
symbol:seh1l-a "Nucleoporin seh1-A" species:8355 "Xenopus
laevis" [GO:0006999 "nuclear pore organization" evidence=ISS]
[GO:0007080 "mitotic metaphase plate congression" evidence=ISS]
[GO:0031080 "nuclear pore outer ring" evidence=ISS] [GO:0051315
"attachment of spindle microtubules to kinetochore involved in
mitotic sister chromatid segregation" evidence=ISS] [GO:0000776
"kinetochore" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 EMBL:BC099027 RefSeq:NP_001089593.1
UniGene:Xl.47439 ProteinModelPortal:Q4FZW5 GeneID:734650
KEGG:xla:734650 CTD:81929 Xenbase:XB-GENE-1015667 KO:K14299
Uniprot:Q4FZW5
Length = 360
Score = 304 (112.1 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 59/101 (58%), Positives = 76/101 (75%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHKDLIHD 111
C SC++WN S SR +S I++ + S N K I++
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNIMGKVQIYE 201
Score = 175 (66.7 bits), Expect = 7.7e-13, P = 7.7e-13
Identities = 37/88 (42%), Positives = 54/88 (61%)
Query: 95 MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC 154
M+ A SI A+HKDLIHDV++D++G RMATCSSDQ++KV + +++ H
Sbjct: 1 MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSENGNW--HCTASWKTHSG 58
Query: 155 TVWRVSWNIT--GTIVASSGDDGCVRLW 180
+VWRV+W G ++AS D +W
Sbjct: 59 SVWRVTWAHPEFGQVLASCSFDRTAAVW 86
Score = 168 (64.2 bits), Expect = 4.1e-43, Sum P(2) = 4.1e-43
Identities = 28/42 (66%), Positives = 35/42 (83%)
Query: 139 TRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
T+F+I T+ F++H VWRVSWNITGT++ASSGDDG VRLW
Sbjct: 264 TKFEIHTVAQFDNHNSQVWRVSWNITGTVLASSGDDGTVRLW 305
Score = 47 (21.6 bits), Expect = 1.7e-18, Sum P(3) = 1.7e-18
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 109 IHDVAY--DYYGLRMATCSSDQNIKVTR--DVM 137
+ DV + + GL +ATCS+D +++ DVM
Sbjct: 116 VTDVKFAPKHMGLMLATCSADGVVRIYEAPDVM 148
Score = 47 (21.6 bits), Expect = 1.7e-18, Sum P(3) = 1.7e-18
Identities = 12/38 (31%), Positives = 21/38 (55%)
Query: 18 RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYE 55
RS D + + DV F G +ATC++D V++++
Sbjct: 5 RSIAADHKDLIHDVSFDFH--GRRMATCSSDQSVKVWD 40
Score = 45 (20.9 bits), Expect = 2.7e-18, Sum P(3) = 2.7e-18
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 113 AYDYYGLRMATCSSDQNIKVTRDVMGTRFD 142
A+ +G +A+CS D+ V +++G D
Sbjct: 66 AHPEFGQVLASCSFDRTAAVWEEIVGESND 95
Score = 44 (20.5 bits), Expect = 3.4e-18, Sum P(3) = 3.4e-18
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 27 SVTDVKFGPKQLGLVLATCAADGLVRIYE 55
SV V + + G VLA+C+ D ++E
Sbjct: 59 SVWRVTWAHPEFGQVLASCSFDRTAAVWE 87
>UNIPROTKB|Q6GNF1 [details] [associations]
symbol:seh1l-b "Nucleoporin seh1-B" species:8355 "Xenopus
laevis" [GO:0006999 "nuclear pore organization" evidence=ISS]
[GO:0007080 "mitotic metaphase plate congression" evidence=ISS]
[GO:0031080 "nuclear pore outer ring" evidence=ISS] [GO:0051315
"attachment of spindle microtubules to kinetochore involved in
mitotic sister chromatid segregation" evidence=ISS] [GO:0000776
"kinetochore" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 EMBL:BC073561 RefSeq:NP_001085936.1
UniGene:Xl.3340 ProteinModelPortal:Q6GNF1 GeneID:444365
KEGG:xla:444365 Uniprot:Q6GNF1
Length = 360
Score = 304 (112.1 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 59/101 (58%), Positives = 76/101 (75%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+LATC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWVKRTTLVDSRTSVTDVKFAPKHMGLMLATCSADGVVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNS--ISIMYEAHSINAEHKDLIHD 111
C SC++WN S SR +S I++ + S N K I++
Sbjct: 161 CKLSCSCISWNPSSSRAHSPMIAVGSDDSSPNIMGKVQIYE 201
Score = 177 (67.4 bits), Expect = 4.7e-13, P = 4.7e-13
Identities = 37/88 (42%), Positives = 54/88 (61%)
Query: 95 MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC 154
M+ A SI A+HKDLIHDV++D++G RMATCSSDQ++KV + +++ H
Sbjct: 1 MFVARSIAADHKDLIHDVSFDFHGRRMATCSSDQSVKVWDKSENVNW--HCTASWKTHSG 58
Query: 155 TVWRVSWNIT--GTIVASSGDDGCVRLW 180
+VWRV+W G ++AS D +W
Sbjct: 59 SVWRVTWAHPEFGQVLASCSFDRTAAVW 86
Score = 161 (61.7 bits), Expect = 2.2e-42, Sum P(2) = 2.2e-42
Identities = 27/42 (64%), Positives = 34/42 (80%)
Query: 139 TRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
T+F+ T+ F++H VWRVSWNITGT++ASSGDDG VRLW
Sbjct: 264 TKFENHTVAQFDNHNSQVWRVSWNITGTVLASSGDDGTVRLW 305
Score = 51 (23.0 bits), Expect = 4.1e-18, Sum P(3) = 4.1e-18
Identities = 13/44 (29%), Positives = 24/44 (54%)
Query: 18 RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMN 61
RS D + + DV F G +ATC++D V++++ + +N
Sbjct: 5 RSIAADHKDLIHDVSFDFH--GRRMATCSSDQSVKVWDKSENVN 46
Score = 47 (21.6 bits), Expect = 4.1e-18, Sum P(3) = 4.1e-18
Identities = 12/33 (36%), Positives = 20/33 (60%)
Query: 109 IHDVAY--DYYGLRMATCSSDQNIKVTR--DVM 137
+ DV + + GL +ATCS+D +++ DVM
Sbjct: 116 VTDVKFAPKHMGLMLATCSADGVVRIYEAPDVM 148
Score = 45 (20.9 bits), Expect = 6.6e-18, Sum P(3) = 6.6e-18
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 113 AYDYYGLRMATCSSDQNIKVTRDVMGTRFD 142
A+ +G +A+CS D+ V +++G D
Sbjct: 66 AHPEFGQVLASCSFDRTAAVWEEIVGESND 95
Score = 44 (20.5 bits), Expect = 2.1e-17, Sum P(3) = 2.1e-17
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 27 SVTDVKFGPKQLGLVLATCAADGLVRIYE 55
SV V + + G VLA+C+ D ++E
Sbjct: 59 SVWRVTWAHPEFGQVLASCSFDRTAAVWE 87
>ZFIN|ZDB-GENE-030131-6689 [details] [associations]
symbol:seh1l "SEH1-like (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0006999 "nuclear pore organization" evidence=ISS]
[GO:0051315 "attachment of spindle microtubules to kinetochore
involved in mitotic sister chromatid segregation" evidence=ISS]
[GO:0000776 "kinetochore" evidence=IEA;ISS] [GO:0007080 "mitotic
metaphase plate congression" evidence=ISS] [GO:0031080 "nuclear
pore outer ring" evidence=ISS] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA] [GO:0006810
"transport" evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IEA]
[GO:0007059 "chromosome segregation" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0000777 "condensed chromosome kinetochore" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
ZFIN:ZDB-GENE-030131-6689 GO:GO:0051301 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0051028 GO:GO:0051315 GO:GO:0000777
GO:GO:0007080 GO:GO:0031080 GO:GO:0006999 EMBL:BX294130 CTD:81929
KO:K14299 eggNOG:NOG257251 GeneTree:ENSGT00550000074999
HOGENOM:HOG000216896 EMBL:AY398414 IPI:IPI00499010
RefSeq:NP_956217.2 UniGene:Dr.20191 ProteinModelPortal:Q6TGU2
STRING:Q6TGU2 Ensembl:ENSDART00000013865 GeneID:334749
KEGG:dre:334749 InParanoid:Q6TGU2 NextBio:20810534
ArrayExpress:Q6TGU2 Bgee:Q6TGU2 Uniprot:Q6TGU2
Length = 364
Score = 297 (109.6 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 57/101 (56%), Positives = 71/101 (70%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+ W +R+ LVDSRTSVTDVKF PK +GL+L TC+ADG+VRIYEAPDVMNLSQW LQHE++
Sbjct: 101 SHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQHEIS 160
Query: 73 CPTLASCLTWNHSFSRFNSISIMYEAHSINAEH--KDLIHD 111
C SC++WN S SR + I N + K IH+
Sbjct: 161 CKLACSCISWNPSSSRAHPPMIAVGGDDSNGAYSGKVQIHE 201
Score = 183 (69.5 bits), Expect = 1.0e-13, P = 1.0e-13
Identities = 40/88 (45%), Positives = 56/88 (63%)
Query: 95 MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC 154
M+ A SI A+HKDLIHDV+YD++G RMATCSSDQ++KV D G + +++ H
Sbjct: 1 MFVAKSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVW-D-KGDDGEWHCTASWKTHSG 58
Query: 155 TVWRVSWNIT--GTIVASSGDDGCVRLW 180
+VWRV+W G ++AS D +W
Sbjct: 59 SVWRVTWAHPEFGQVLASCSFDRTAAVW 86
Score = 164 (62.8 bits), Expect = 5.9e-42, Sum P(2) = 5.9e-42
Identities = 26/42 (61%), Positives = 34/42 (80%)
Query: 139 TRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
T+F+++ + F+ H VWRVSWNIT T++ASSGDDGCVRLW
Sbjct: 264 TKFEVQVMAQFDSHNSQVWRVSWNITSTLLASSGDDGCVRLW 305
Score = 45 (20.9 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 113 AYDYYGLRMATCSSDQNIKVTRDVMGTRFD 142
A+ +G +A+CS D+ V +++G D
Sbjct: 66 AHPEFGQVLASCSFDRTAAVWEEIVGESND 95
Score = 44 (20.5 bits), Expect = 1.7e-17, Sum P(3) = 1.7e-17
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 18 RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPD 58
+S D + + DV + G +ATC++D V++++ D
Sbjct: 5 KSIAADHKDLIHDVSYDFH--GRRMATCSSDQSVKVWDKGD 43
Score = 44 (20.5 bits), Expect = 2.9e-14, Sum P(2) = 2.9e-14
Identities = 10/29 (34%), Positives = 16/29 (55%)
Query: 27 SVTDVKFGPKQLGLVLATCAADGLVRIYE 55
SV V + + G VLA+C+ D ++E
Sbjct: 59 SVWRVTWAHPEFGQVLASCSFDRTAAVWE 87
>UNIPROTKB|C1BK83 [details] [associations]
symbol:seh1l "Nucleoporin seh1" species:8014 "Osmerus
mordax" [GO:0006999 "nuclear pore organization" evidence=ISS]
[GO:0007080 "mitotic metaphase plate congression" evidence=ISS]
[GO:0031080 "nuclear pore outer ring" evidence=ISS] [GO:0051315
"attachment of spindle microtubules to kinetochore involved in
mitotic sister chromatid segregation" evidence=ISS] [GO:0000776
"kinetochore" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0051301 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0015031 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0051028 GO:GO:0051315 GO:GO:0000777 GO:GO:0007080
GO:GO:0031080 GO:GO:0006999 EMBL:BT075012 ProteinModelPortal:C1BK83
Uniprot:C1BK83
Length = 364
Score = 308 (113.5 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 58/108 (53%), Positives = 76/108 (70%)
Query: 9 EKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQ 68
++ L+ W +R+ LVDSRTSVTDVKF PK +GL+L TC+ADG+VRIYEAPDVMNLSQW LQ
Sbjct: 97 QRGLSHWIKRTTLVDSRTSVTDVKFAPKHMGLMLTTCSADGVVRIYEAPDVMNLSQWSLQ 156
Query: 69 HEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDY 116
HE++C SC++WN S SR +S I + N + + Y+Y
Sbjct: 157 HEISCKLSCSCISWNPSSSRAHSPMIAVGSDDSNTAYSGKVQ--IYEY 202
Score = 180 (68.4 bits), Expect = 2.2e-13, P = 2.2e-13
Identities = 39/88 (44%), Positives = 55/88 (62%)
Query: 95 MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYC 154
M+ A SI A+HKDLIHDV+YD++G RMATCSSDQ++KV D + +++ H
Sbjct: 1 MFVARSIAADHKDLIHDVSYDFHGRRMATCSSDQSVKVW-D-KSDNGEWNCTASWKTHSG 58
Query: 155 TVWRVSWNIT--GTIVASSGDDGCVRLW 180
+VWRV+W G ++AS D +W
Sbjct: 59 SVWRVTWAHPEFGQVLASCSFDRTAAVW 86
Score = 152 (58.6 bits), Expect = 7.5e-42, Sum P(2) = 7.5e-42
Identities = 25/42 (59%), Positives = 32/42 (76%)
Query: 139 TRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
T+ +++ F+ H VWRVSWNIT T++ASSGDDGCVRLW
Sbjct: 263 TKLEVQLQAQFDGHNSQVWRVSWNITSTLLASSGDDGCVRLW 304
Score = 49 (22.3 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 18/69 (26%), Positives = 28/69 (40%)
Query: 14 QWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEA-PDVMNLSQWCLQHEVA 72
+W ++ SV V + + G VLA+C+ D ++E N Q L H +
Sbjct: 46 EWNCTASWKTHSGSVWRVTWAHPEFGQVLASCSFDRTAAVWEEIVGESNDKQRGLSHWIK 105
Query: 73 CPTLASCLT 81
TL T
Sbjct: 106 RTTLVDSRT 114
Score = 48 (22.0 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 12/41 (29%), Positives = 22/41 (53%)
Query: 18 RSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPD 58
RS D + + DV + G +ATC++D V++++ D
Sbjct: 5 RSIAADHKDLIHDVSYDFH--GRRMATCSSDQSVKVWDKSD 43
Score = 45 (20.9 bits), Expect = 1.5e-16, Sum P(3) = 1.5e-16
Identities = 9/30 (30%), Positives = 17/30 (56%)
Query: 113 AYDYYGLRMATCSSDQNIKVTRDVMGTRFD 142
A+ +G +A+CS D+ V +++G D
Sbjct: 66 AHPEFGQVLASCSFDRTAAVWEEIVGESND 95
Score = 43 (20.2 bits), Expect = 1.9e-16, Sum P(3) = 1.9e-16
Identities = 11/33 (33%), Positives = 19/33 (57%)
Query: 109 IHDVAY--DYYGLRMATCSSDQNIKVTR--DVM 137
+ DV + + GL + TCS+D +++ DVM
Sbjct: 116 VTDVKFAPKHMGLMLTTCSADGVVRIYEAPDVM 148
>FB|FBgn0033247 [details] [associations]
symbol:Nup44A "Nucleoporin at 44A" species:7227 "Drosophila
melanogaster" [GO:0005643 "nuclear pore" evidence=ISS] [GO:0017056
"structural constituent of nuclear pore" evidence=ISS] [GO:0007184
"SMAD protein import into nucleus" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0051445 "regulation of meiotic cell
cycle" evidence=IMP] [GO:0007346 "regulation of mitotic cell cycle"
evidence=IMP] [GO:0043234 "protein complex" evidence=IPI]
[GO:0005635 "nuclear envelope" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:AE013599 GO:GO:0007346
GO:GO:0005635 GO:GO:0043234 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0048477
GO:GO:0051445 KO:K14299 GeneTree:ENSGT00550000074999 OMA:YEAPDIM
EMBL:AY060480 RefSeq:NP_610343.1 RefSeq:NP_724637.1
RefSeq:NP_724638.1 UniGene:Dm.3965 SMR:Q7K2X8 IntAct:Q7K2X8
STRING:Q7K2X8 EnsemblMetazoa:FBtr0088860 EnsemblMetazoa:FBtr0088861
EnsemblMetazoa:FBtr0088862 GeneID:35762 KEGG:dme:Dmel_CG8722
UCSC:CG8722-RA CTD:35762 FlyBase:FBgn0033247 InParanoid:Q7K2X8
OrthoDB:EOG42V6XT GenomeRNAi:35762 NextBio:795094 Uniprot:Q7K2X8
Length = 354
Score = 266 (98.7 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
Identities = 48/72 (66%), Positives = 60/72 (83%)
Query: 14 QWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC 73
+W RR+ LVDSRTSVTDV+F PK LGL+LAT +ADG++RIYEAPD+MNLSQW +QHE++
Sbjct: 103 RWVRRTTLVDSRTSVTDVEFAPKYLGLLLATASADGIIRIYEAPDIMNLSQWPVQHEISN 162
Query: 74 PTLASCLTWNHS 85
SCL+WN S
Sbjct: 163 KLPLSCLSWNTS 174
Score = 182 (69.1 bits), Expect = 1.2e-13, P = 1.2e-13
Identities = 37/89 (41%), Positives = 57/89 (64%)
Query: 95 MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKV-TRDVMGTRFDIETIGNFEDHY 153
M++ I A+HKD+IHDV +DYYG RMATCSSDQ +K+ D G ++++ + +++ H
Sbjct: 1 MFDVEPIIADHKDVIHDVVFDYYGRRMATCSSDQTVKIWDEDGQG-KWNVTS--SWKAHS 57
Query: 154 CTVWRVSWNIT--GTIVASSGDDGCVRLW 180
++WRVSW G +VA+ D +W
Sbjct: 58 GSIWRVSWAHPEFGQVVATCSFDRTASVW 86
Score = 147 (56.8 bits), Expect = 6.4e-37, Sum P(2) = 6.4e-37
Identities = 29/64 (45%), Positives = 40/64 (62%)
Query: 121 MATCSSDQ---NIKVTRDVMG-TRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGC 176
+A S D N++ D ++ DI+TI F +H C VWRV WN+ T++ S+GDDGC
Sbjct: 237 LAVASKDLYIVNLRGVTDATDISKLDIQTI-KFSEHNCPVWRVCWNMLATMLISTGDDGC 295
Query: 177 VRLW 180
VRLW
Sbjct: 296 VRLW 299
Score = 48 (22.0 bits), Expect = 7.7e-13, Sum P(2) = 7.7e-13
Identities = 11/42 (26%), Positives = 20/42 (47%)
Query: 14 QWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYE 55
+W S+ S+ V + + G V+ATC+ D ++E
Sbjct: 46 KWNVTSSWKAHSGSIWRVSWAHPEFGQVVATCSFDRTASVWE 87
Score = 47 (21.6 bits), Expect = 9.8e-13, Sum P(2) = 9.8e-13
Identities = 11/35 (31%), Positives = 20/35 (57%)
Query: 21 LVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYE 55
+ D + + DV F G +ATC++D V+I++
Sbjct: 8 IADHKDVIHDVVFD--YYGRRMATCSSDQTVKIWD 40
>DICTYBASE|DDB_G0277257 [details] [associations]
symbol:DDB_G0277257 "Nucleoporin SEH1" species:44689
"Dictyostelium discoideum" [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0277257 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AAFI02000019 KO:K14299 RefSeq:XP_642765.1
ProteinModelPortal:Q86K39 STRING:Q86K39 EnsemblProtists:DDB0169145
GeneID:8620954 KEGG:ddi:DDB_G0277257 InParanoid:Q86K39 OMA:TELEDHI
Uniprot:Q86K39
Length = 467
Score = 221 (82.9 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 41/80 (51%), Positives = 56/80 (70%)
Query: 7 QSEKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWC 66
+ EK +W +++LVDSR SVTD+KF PK GL LATC++DG +RIYEA D+MNLSQW
Sbjct: 90 EDEKGQKKWQLKAHLVDSRDSVTDIKFAPKSFGLRLATCSSDGYIRIYEAMDIMNLSQWT 149
Query: 67 LQHEVACPT-LASCLTWNHS 85
+ E ++C++WN S
Sbjct: 150 IVEEFESQKGTSNCISWNPS 169
Score = 167 (63.8 bits), Expect = 1.1e-11, P = 1.1e-11
Identities = 33/84 (39%), Positives = 51/84 (60%)
Query: 99 HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWR 158
H ++ H DLIHDV+YD+YG R+ATCSSDQ IKV ++++ ++ H +VW+
Sbjct: 5 HRLSTAHDDLIHDVSYDFYGKRLATCSSDQKIKVWDQNDNQKWELSA--EWKAHSGSVWK 62
Query: 159 VSWNIT--GTIVASSGDDGCVRLW 180
++W G ++AS D V +W
Sbjct: 63 LAWAHPEYGQVIASCSFDRTVCIW 86
Score = 146 (56.5 bits), Expect = 1.0e-30, Sum P(2) = 1.0e-30
Identities = 33/78 (42%), Positives = 47/78 (60%)
Query: 109 IHDVAYD-----YYGLRMATCSSDQNIKVTR-DVMGTRFDIETIGNFEDHYCTVWRVSWN 162
IHDV + Y L +AT S D +++ + ++ +++ + +DH VWRV WN
Sbjct: 365 IHDVCWAPNMGRSYHL-IATASKDHKVRIWKLSSDKSKMELKEVMRKDDHKSEVWRVEWN 423
Query: 163 ITGTIVASSGDDGCVRLW 180
ITGTI+ASSGDDG V LW
Sbjct: 424 ITGTILASSGDDGNVCLW 441
Score = 48 (22.0 bits), Expect = 2.9e-12, Sum P(2) = 2.9e-12
Identities = 13/43 (30%), Positives = 23/43 (53%)
Query: 27 SVTDVKFGPKQLGLVLATCAADGLVRIYE-APDVMNLSQWCLQ 68
SV + + + G V+A+C+ D V I+E + D +W L+
Sbjct: 59 SVWKLAWAHPEYGQVIASCSFDRTVCIWEESEDEKGQKKWQLK 101
Score = 43 (20.2 bits), Expect = 9.6e-12, Sum P(2) = 9.6e-12
Identities = 11/32 (34%), Positives = 19/32 (59%)
Query: 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHE 70
G LATC++D +++++ D N +W L E
Sbjct: 24 GKRLATCSSDQKIKVWDQND--N-QKWELSAE 52
Score = 39 (18.8 bits), Expect = 1.6e-19, Sum P(2) = 1.6e-19
Identities = 9/40 (22%), Positives = 18/40 (45%)
Query: 141 FDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
FD + G + W + + ++A++ D VR+W
Sbjct: 354 FDSSSDGGSRAIHDVCWAPNMGRSYHLIATASKDHKVRIW 393
Score = 35 (17.4 bits), Expect = 4.1e-19, Sum P(2) = 4.1e-19
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 104 EHKDLIHDVAYDYYGLRMATCSSDQNI 130
+HK + V ++ G +A+ D N+
Sbjct: 412 DHKSEVWRVEWNITGTILASSGDDGNV 438
>POMBASE|SPAC15F9.02 [details] [associations]
symbol:seh1 "nucleoporin Seh1" species:4896
"Schizosaccharomyces pombe" [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0005643
"nuclear pore" evidence=IDA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006407 "rRNA export from nucleus" evidence=ISO] [GO:0015031
"protein transport" evidence=IEA] [GO:0031080 "nuclear pore outer
ring" evidence=IDA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0031965 "nuclear membrane" evidence=IDA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPAC15F9.02 GO:GO:0005829
EMBL:CU329670 GenomeReviews:CU329670_GR Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0015031 eggNOG:COG2319
GO:GO:0051028 GO:GO:0031080 GO:GO:0006407 KO:K14299
HOGENOM:HOG000216896 OMA:YEAPDIM PIR:T37727 RefSeq:NP_593751.1
ProteinModelPortal:Q10099 IntAct:Q10099 STRING:Q10099
EnsemblFungi:SPAC15F9.02.1 GeneID:2541682 KEGG:spo:SPAC15F9.02
OrthoDB:EOG418FX3 NextBio:20802775 Uniprot:Q10099
Length = 339
Score = 152 (58.6 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 24/38 (63%), Positives = 32/38 (84%)
Query: 143 IETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
+E IG +++H C VWR +N+TGTI++SSGDDGCVRLW
Sbjct: 279 VELIGEYDNHKCQVWRCRFNVTGTILSSSGDDGCVRLW 316
Score = 127 (49.8 bits), Expect = 1.0e-21, Sum P(2) = 1.0e-21
Identities = 25/58 (43%), Positives = 37/58 (63%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
W + L+D+R++V D+ F P Q G LA +AD +RIYEA + NL+ W L +E+A
Sbjct: 101 WVEVAKLMDARSAVLDISFCPFQHGCKLAAVSADATLRIYEAMEPGNLTYWTLMNEIA 158
Score = 115 (45.5 bits), Expect = 1.9e-20, Sum P(2) = 1.9e-20
Identities = 19/35 (54%), Positives = 27/35 (77%)
Query: 98 AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKV 132
A +I H+DL++DV YD+YG RM +CS+DQ +KV
Sbjct: 6 ATTIQTNHQDLVNDVTYDFYGRRMVSCSADQRVKV 40
Score = 55 (24.4 bits), Expect = 3.3e-14, Sum P(2) = 3.3e-14
Identities = 15/41 (36%), Positives = 18/41 (43%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYE 55
W S S+ V + G VLA C+ D VRIYE
Sbjct: 50 WAITSEWRAGDASLMRVAWAHPSFGQVLAVCSLDRGVRIYE 90
Score = 48 (22.0 bits), Expect = 1.7e-13, Sum P(2) = 1.7e-13
Identities = 16/70 (22%), Positives = 30/70 (42%)
Query: 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASC-LTWNH-SFSRFNSISIMY 96
G + +C+AD V++Y+ D + W + E + + W H SF + ++ +
Sbjct: 26 GRRMVSCSADQRVKVYDFND--DTETWAITSEWRAGDASLMRVAWAHPSFGQVLAVCSLD 83
Query: 97 EAHSINAEHK 106
I E K
Sbjct: 84 RGVRIYEEQK 93
Score = 39 (18.8 bits), Expect = 1.5e-12, Sum P(2) = 1.5e-12
Identities = 6/20 (30%), Positives = 13/20 (65%)
Query: 113 AYDYYGLRMATCSSDQNIKV 132
A+ +G +A CS D+ +++
Sbjct: 69 AHPSFGQVLAVCSLDRGVRI 88
>SGD|S000003068 [details] [associations]
symbol:SEH1 "Component of two distinct complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0005773 "vacuole"
evidence=IEA] [GO:0035859 "Seh1-associated complex" evidence=IDA]
[GO:0031080 "nuclear pore outer ring" evidence=IDA] [GO:0017056
"structural constituent of nuclear pore" evidence=IC] [GO:0005643
"nuclear pore" evidence=IEA;IDA] [GO:0006913 "nucleocytoplasmic
transport" evidence=IC] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0000329 "fungal-type vacuole membrane"
evidence=IDA] [GO:0016021 "integral to membrane" evidence=ISM]
[GO:0005774 "vacuolar membrane" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000003068 GO:GO:0005886
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 EMBL:BK006941
GO:GO:0015031 eggNOG:COG2319 GO:GO:0006913 GO:GO:0000329
GO:GO:0051028 TCDB:9.A.14.1.1 GO:GO:0031080 GO:GO:0035859
GO:GO:0017056 PDB:3EWE PDB:3F3F PDB:3F3G PDB:3F3P PDBsum:3EWE
PDBsum:3F3F PDBsum:3F3G PDBsum:3F3P KO:K14299
GeneTree:ENSGT00550000074999 HOGENOM:HOG000216896 OMA:YEAPDIM
OrthoDB:EOG418FX3 EMBL:X90994 EMBL:Z72622 EMBL:AY558497 PIR:S62137
RefSeq:NP_011415.1 ProteinModelPortal:P53011 SMR:P53011
DIP:DIP-4193N IntAct:P53011 MINT:MINT-547303 STRING:P53011
PaxDb:P53011 PeptideAtlas:P53011 EnsemblFungi:YGL100W GeneID:852778
KEGG:sce:YGL100W CYGD:YGL100w EvolutionaryTrace:P53011
NextBio:972254 Genevestigator:P53011 GermOnline:YGL100W
Uniprot:P53011
Length = 349
Score = 146 (56.5 bits), Expect = 1.1e-09, P = 1.1e-09
Identities = 32/78 (41%), Positives = 46/78 (58%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT 164
H DL+HDV YD+YG +ATCSSDQ+IKV + T + E ++ H ++ + W
Sbjct: 8 HDDLVHDVVYDFYGRHVATCSSDQHIKVFKLDKDTS-NWELSDSWRAHDSSIVAIDWASP 66
Query: 165 --GTIVASSGDDGCVRLW 180
G I+AS+ D V+LW
Sbjct: 67 EYGRIIASASYDKTVKLW 84
Score = 138 (53.6 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 25/55 (45%), Positives = 36/55 (65%)
Query: 126 SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
SD N + ++ + +E + +DH VW VSWN+TGTI++S+GDDG VRLW
Sbjct: 278 SDSNTEEKAELQ-SNLQVELLSEHDDHNGEVWSVSWNLTGTILSSAGDDGKVRLW 331
Score = 121 (47.7 bits), Expect = 1.9e-19, Sum P(2) = 1.9e-19
Identities = 32/86 (37%), Positives = 45/86 (52%)
Query: 5 PLQSEKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQ 64
P Q E +W + L DS+ S+ VKF P LGL LA DG++R+Y+A + +L
Sbjct: 88 PDQEECSGRRWNKLCTLNDSKGSLYSVKFAPAHLGLKLACLGNDGILRLYDALEPSDLRS 147
Query: 65 WCLQHEV---ACPT---LAS--CLTW 82
W L E+ + P L S CL+W
Sbjct: 148 WTLTSEMKVLSIPPANHLQSDFCLSW 173
Score = 44 (20.5 bits), Expect = 1.9e-11, Sum P(2) = 1.9e-11
Identities = 10/51 (19%), Positives = 25/51 (49%)
Query: 9 EKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEA-PD 58
+K + W + +S+ + + + G ++A+ + D V+++E PD
Sbjct: 39 DKDTSNWELSDSWRAHDSSIVAIDWASPEYGRIIASASYDKTVKLWEEDPD 89
Score = 36 (17.7 bits), Expect = 1.3e-10, Sum P(2) = 1.3e-10
Identities = 7/27 (25%), Positives = 16/27 (59%)
Query: 39 GLVLATCAADGLVRIYEAPDVMNLSQW 65
G +ATC++D +++++ + S W
Sbjct: 21 GRHVATCSSDQHIKVFKLDK--DTSNW 45
Score = 35 (17.4 bits), Expect = 1.6e-10, Sum P(2) = 1.6e-10
Identities = 6/21 (28%), Positives = 14/21 (66%)
Query: 41 VLATCAADGLVRIYEAPDVMN 61
++AT DG +RI++ + ++
Sbjct: 230 LIATGCKDGRIRIFKITEKLS 250
>CGD|CAL0005451 [details] [associations]
symbol:orf19.2186 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0031965 "nuclear membrane"
evidence=IEA] [GO:0000329 "fungal-type vacuole membrane"
evidence=IEA] [GO:0005829 "cytosol" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IEA] [GO:0031080 "nuclear pore
outer ring" evidence=IEA] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005451 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AACQ01000076 EMBL:AACQ01000075 KO:K14299
RefSeq:XP_715969.1 RefSeq:XP_716027.1 ProteinModelPortal:Q5A2S9
STRING:Q5A2S9 GeneID:3642290 GeneID:3642391 KEGG:cal:CaO19.2186
KEGG:cal:CaO19.9732 Uniprot:Q5A2S9
Length = 347
Score = 148 (57.2 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 34/83 (40%), Positives = 48/83 (57%)
Query: 104 EHKDLIHDVAY-DYYGLR---MATCSSDQNIKVTRDVMGTRFD--IETIGNFEDHYCTVW 157
EH LI V++ G + +AT D +++ + D IET+ DH VW
Sbjct: 234 EHNGLIRSVSWAPSMGRKYHLIATGCKDGFVRIFKATEQENGDLKIETLAKLNDHKSEVW 293
Query: 158 RVSWNITGTIVASSGDDGCVRLW 180
RVSWN+TGTI++S+GDDG +RLW
Sbjct: 294 RVSWNMTGTILSSAGDDGKLRLW 316
Score = 124 (48.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 31/93 (33%), Positives = 51/93 (54%)
Query: 93 SIMYEAHS-INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED 151
S++Y A H++LIHD+ YD+YG +AT SSDQ+IKV D+ +++
Sbjct: 5 SLIYPAMKPFITGHEELIHDIKYDFYGKHIATVSSDQHIKVF-DLDSATSSWILNDSWKA 63
Query: 152 HYCTVWRVSWN----ITGTIVASSGDDGCVRLW 180
H ++ ++SW + I+AS D V++W
Sbjct: 64 HDSSIAKISWAHPEFSSSKIIASCSYDRTVKIW 96
Score = 98 (39.6 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 14 QWTRRSNLV-DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+W + + L +S + DV F P LG L +DG+ RIYE+ + +L+ W L E+A
Sbjct: 109 RWLKLATLATESYGPIYDVCFAPNHLGFKLGCVGSDGIFRIYESLEPNDLTAWVLTTEIA 168
Score = 46 (21.3 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 41 VLATCAADGLVRIY-EAPDVMNLS--QWC----LQHEVACPTLASCLTWNH 84
++A+C+ D V+I+ E PD M S +W L E P C NH
Sbjct: 83 IIASCSYDRTVKIWQEQPDEMPGSGRRWLKLATLATESYGPIYDVCFAPNH 133
>UNIPROTKB|Q5A2S9 [details] [associations]
symbol:SEH1 "Putative uncharacterized protein SEH1"
species:237561 "Candida albicans SC5314" [GO:0003674
"molecular_function" evidence=ND] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 CGD:CAL0005451 Gene3D:2.130.10.10 SUPFAM:SSF50978
eggNOG:COG2319 EMBL:AACQ01000076 EMBL:AACQ01000075 KO:K14299
RefSeq:XP_715969.1 RefSeq:XP_716027.1 ProteinModelPortal:Q5A2S9
STRING:Q5A2S9 GeneID:3642290 GeneID:3642391 KEGG:cal:CaO19.2186
KEGG:cal:CaO19.9732 Uniprot:Q5A2S9
Length = 347
Score = 148 (57.2 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 34/83 (40%), Positives = 48/83 (57%)
Query: 104 EHKDLIHDVAY-DYYGLR---MATCSSDQNIKVTRDVMGTRFD--IETIGNFEDHYCTVW 157
EH LI V++ G + +AT D +++ + D IET+ DH VW
Sbjct: 234 EHNGLIRSVSWAPSMGRKYHLIATGCKDGFVRIFKATEQENGDLKIETLAKLNDHKSEVW 293
Query: 158 RVSWNITGTIVASSGDDGCVRLW 180
RVSWN+TGTI++S+GDDG +RLW
Sbjct: 294 RVSWNMTGTILSSAGDDGKLRLW 316
Score = 124 (48.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 31/93 (33%), Positives = 51/93 (54%)
Query: 93 SIMYEAHS-INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED 151
S++Y A H++LIHD+ YD+YG +AT SSDQ+IKV D+ +++
Sbjct: 5 SLIYPAMKPFITGHEELIHDIKYDFYGKHIATVSSDQHIKVF-DLDSATSSWILNDSWKA 63
Query: 152 HYCTVWRVSWN----ITGTIVASSGDDGCVRLW 180
H ++ ++SW + I+AS D V++W
Sbjct: 64 HDSSIAKISWAHPEFSSSKIIASCSYDRTVKIW 96
Score = 98 (39.6 bits), Expect = 3.5e-18, Sum P(2) = 3.5e-18
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 14 QWTRRSNLV-DSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
+W + + L +S + DV F P LG L +DG+ RIYE+ + +L+ W L E+A
Sbjct: 109 RWLKLATLATESYGPIYDVCFAPNHLGFKLGCVGSDGIFRIYESLEPNDLTAWVLTTEIA 168
Score = 46 (21.3 bits), Expect = 8.8e-13, Sum P(2) = 8.8e-13
Identities = 17/51 (33%), Positives = 24/51 (47%)
Query: 41 VLATCAADGLVRIY-EAPDVMNLS--QWC----LQHEVACPTLASCLTWNH 84
++A+C+ D V+I+ E PD M S +W L E P C NH
Sbjct: 83 IIASCSYDRTVKIWQEQPDEMPGSGRRWLKLATLATESYGPIYDVCFAPNH 133
>WB|WBGene00003804 [details] [associations]
symbol:npp-18 species:6239 "Caenorhabditis elegans"
[GO:0045132 "meiotic chromosome segregation" evidence=IMP]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0015031
eggNOG:COG2319 GO:GO:0005643 GO:GO:0045132 GO:GO:0051028 KO:K14299
GeneTree:ENSGT00550000074999 HOGENOM:HOG000216896 OMA:YEAPDIM
EMBL:AL021481 PIR:T26842 RefSeq:NP_499740.1
ProteinModelPortal:O45933 SMR:O45933 STRING:O45933 PaxDb:O45933
EnsemblMetazoa:Y43F4B.4.1 EnsemblMetazoa:Y43F4B.4.2 GeneID:176748
KEGG:cel:CELE_Y43F4B.4 UCSC:Y43F4B.4 CTD:176748 WormBase:Y43F4B.4
InParanoid:O45933 NextBio:893842 Uniprot:O45933
Length = 363
Score = 206 (77.6 bits), Expect = 2.7e-16, P = 2.7e-16
Identities = 51/121 (42%), Positives = 74/121 (61%)
Query: 6 LQSEKCL----NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMN 61
++SEK L +QW RR+ + D+R+ VTD+ F P+ LGL++A+C G VRIYEAPD+++
Sbjct: 96 VRSEKDLKQKESQWIRRTIISDNRSDVTDICFSPRHLGLMMASCNVLGTVRIYEAPDIVD 155
Query: 62 LSQWCLQHEV-ACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYY-GL 119
S+W L HE+ A T C+TW S SR + I + AE+K + V Y+ GL
Sbjct: 156 ASRWNLIHELQAFHTRCGCVTW--SLSRMHRPLIAVGSDEKKAENKKRV--VIYENIDGL 211
Query: 120 R 120
R
Sbjct: 212 R 212
Score = 113 (44.8 bits), Expect = 0.00013, P = 0.00013
Identities = 29/79 (36%), Positives = 43/79 (54%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKV-TRDVMGTRFDIETIGNFEDHYCTVWRVSWNI 163
H+DLIH V++D +G RMATC+SD + + R G + +++ H VWRV W
Sbjct: 16 HRDLIHCVSFDPHGRRMATCASDMTMAIWDRKPDG---NWRRSAHWKCHGGAVWRVIWAH 72
Query: 164 T--GTIVASSGDDGCVRLW 180
G IVA+ D + +W
Sbjct: 73 PEFGQIVATCSYDRTIVIW 91
>ASPGD|ASPL0000075365 [details] [associations]
symbol:sec13 species:162425 "Emericella nidulans"
[GO:0005643 "nuclear pore" evidence=IDA] [GO:0031081 "nuclear pore
distribution" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IEA] [GO:0043547 "positive regulation of GTPase
activity" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005829 "cytosol"
evidence=IEA] [GO:0030127 "COPII vesicle coat" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IEA] [GO:0005198 "structural
molecule activity" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005643
EMBL:BN001303 GO:GO:0051028 EMBL:AACD01000075 HOGENOM:HOG000216895
KO:K14004 OMA:IKLWKEE RefSeq:XP_661921.1 ProteinModelPortal:Q5B563
SMR:Q5B563 STRING:Q5B563 EnsemblFungi:CADANIAT00006147
GeneID:2872114 KEGG:ani:AN4317.2 OrthoDB:EOG4QNR53 Uniprot:Q5B563
Length = 309
Score = 163 (62.4 bits), Expect = 1.0e-11, P = 1.0e-11
Identities = 37/81 (45%), Positives = 47/81 (58%)
Query: 102 NAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSW 161
N+ H D+IHD DYYG R+ATCSSD+ IK+ T +ET+ + H VW V W
Sbjct: 9 NSGHDDMIHDAGLDYYGRRLATCSSDKTIKIFEIEGDTHKLVETL---KGHEGPVWCVEW 65
Query: 162 NIT--GTIVASSGDDGCVRLW 180
GTI+ASS DG V +W
Sbjct: 66 AHPKFGTILASSSYDGKVLIW 86
Score = 103 (41.3 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 30/96 (31%), Positives = 46/96 (47%)
Query: 89 FNSISIMYEAHSINAEHKDLIHDVAYDYYGLR---MATCSSDQNIKV-TRDVMGTRFDIE 144
+N + Y A H D + DVA+ L +A+ S D+ ++V T D
Sbjct: 201 YNPETKTYNATQTLEGHSDWVRDVAWSPSILSKSYIASASQDKTVRVWTADASNPGQWTS 260
Query: 145 TIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
+ F++ +WRVSW+ +G I+A SG D V LW
Sbjct: 261 QVLEFDN---VLWRVSWSPSGNILAVSGGDNKVSLW 293
Score = 58 (25.5 bits), Expect = 4.1e-06, Sum P(2) = 4.1e-06
Identities = 13/44 (29%), Positives = 22/44 (50%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPD 58
WT+ + SV + + P + G +LA ++DG V + E D
Sbjct: 102 WTKVFDFSLHTASVNMISWAPHETGCLLACASSDGHVSVLEFRD 145
Score = 55 (24.4 bits), Expect = 8.2e-06, Sum P(2) = 8.2e-06
Identities = 18/55 (32%), Positives = 27/55 (49%)
Query: 39 GLVLATCAADGLVRIYEAP-DVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI 92
G LATC++D ++I+E D L + HE P C+ W H +F +I
Sbjct: 25 GRRLATCSSDKTIKIFEIEGDTHKLVETLKGHEG--PVW--CVEWAHP--KFGTI 73
Score = 37 (18.1 bits), Expect = 0.00056, Sum P(2) = 0.00056
Identities = 8/24 (33%), Positives = 15/24 (62%)
Query: 31 VKFGPKQLGLVLATCAADGLVRIY 54
V++ + G +LA+ + DG V I+
Sbjct: 63 VEWAHPKFGTILASSSYDGKVLIW 86
>CGD|CAL0004667 [details] [associations]
symbol:SEC13 species:5476 "Candida albicans" [GO:0005198
"structural molecule activity" evidence=IEA] [GO:0030127 "COPII
vesicle coat" evidence=IEA] [GO:0005829 "cytosol" evidence=IEA]
[GO:0031080 "nuclear pore outer ring" evidence=IEA] [GO:0035859
"Seh1-associated complex" evidence=IEA] [GO:0031081 "nuclear pore
distribution" evidence=IEA] [GO:0030433 "ER-associated protein
catabolic process" evidence=IEA] [GO:0043547 "positive regulation
of GTPase activity" evidence=IEA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0005643 GO:GO:0051028 EMBL:AACQ01000027
EMBL:AACQ01000026 KO:K14004 RefSeq:XP_720011.1 RefSeq:XP_720143.1
ProteinModelPortal:Q5AEF2 SMR:Q5AEF2 STRING:Q5AEF2 GeneID:3638207
GeneID:3638425 KEGG:cal:CaO19.316 KEGG:cal:CaO19.7948
Uniprot:Q5AEF2
Length = 298
Score = 161 (61.7 bits), Expect = 1.5e-11, P = 1.5e-11
Identities = 37/83 (44%), Positives = 48/83 (57%)
Query: 100 SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159
+I H DLIHD DYYG R+ATCSSD+ IK+ D+ GT + + I H VW+V
Sbjct: 3 TIGNAHDDLIHDAVLDYYGKRLATCSSDKTIKIF-DLDGTD-NYKLITTLTGHEGPVWQV 60
Query: 160 SWNIT--GTIVASSGDDGCVRLW 180
SW G+I+AS DG +W
Sbjct: 61 SWAHPKFGSILASCSYDGKALIW 83
Score = 105 (42.0 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 31/81 (38%), Positives = 44/81 (54%)
Query: 105 HKDLIHDVAYDYYGL-R--MATCSSDQNIKV-TRDVMGT-RFDIETIGNFEDHYCTVWRV 159
H D + DVA+ L R +AT S D+ + + T+D G + + T F D C WR
Sbjct: 205 HTDWVRDVAWSPSNLIRSYIATASQDRTVLIWTQDRDGKWQKQLLTEEKFPD-VC--WRC 261
Query: 160 SWNITGTIVASSGDDGCVRLW 180
SW+++G I+A SG D V LW
Sbjct: 262 SWSLSGNILAVSGGDNKVSLW 282
Score = 62 (26.9 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 14/45 (31%), Positives = 23/45 (51%)
Query: 14 QWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPD 58
QW+ + + SV V + P +LG VL ++DG V + + D
Sbjct: 91 QWSIIAEHTVHQASVNSVSWAPHELGAVLLCTSSDGKVSVVDFND 135
Score = 55 (24.4 bits), Expect = 3.8e-06, Sum P(2) = 3.8e-06
Identities = 17/58 (29%), Positives = 30/58 (51%)
Query: 28 VTDVKFGPKQLGLVLATCAADGLVRIY-EAPDVMNLSQWCL--QHEVACPTLASCLTW 82
V V + + G +LA+C+ DG I+ E P+ QW + +H V ++ S ++W
Sbjct: 57 VWQVSWAHPKFGSILASCSYDGKALIWKEQPETQ---QWSIIAEHTVHQASVNS-VSW 110
Score = 44 (20.5 bits), Expect = 5.0e-05, Sum P(2) = 5.0e-05
Identities = 19/67 (28%), Positives = 31/67 (46%)
Query: 39 GLVLATCAADGLVRIYE--APDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSI--SI 94
G LATC++D ++I++ D L HE P ++W H +F SI S
Sbjct: 21 GKRLATCSSDKTIKIFDLDGTDNYKLITTLTGHEG--PVWQ--VSWAHP--KFGSILASC 74
Query: 95 MYEAHSI 101
Y+ ++
Sbjct: 75 SYDGKAL 81
>POMBASE|SPBC215.15 [details] [associations]
symbol:sec13 "COPII-coated vesicle component Sec13"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005643 "nuclear pore" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005789 "endoplasmic reticulum
membrane" evidence=IEA] [GO:0005829 "cytosol" evidence=IDA]
[GO:0005886 "plasma membrane" evidence=ISO] [GO:0006886
"intracellular protein transport" evidence=IC] [GO:0006888 "ER to
Golgi vesicle-mediated transport" evidence=ISO] [GO:0006999
"nuclear pore organization" evidence=ISO] [GO:0030127 "COPII
vesicle coat" evidence=ISO] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0071937 "barrier septum assembly involved in cell
cycle cytokinesis" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 PomBase:SPBC215.15 GO:GO:0005829
GO:GO:0005886 GO:GO:0006886 Gene3D:2.130.10.10 PROSITE:PS00678
GO:GO:0005789 EMBL:CU329671 eggNOG:COG2319 GO:GO:0005643
GenomeReviews:CU329671_GR GO:GO:0006888 GO:GO:0051028 GO:GO:0071937
GO:GO:0030127 GO:GO:0006999 HOGENOM:HOG000216895 KO:K14004
OMA:IKLWKEE OrthoDB:EOG4QNR53 PIR:T39905 RefSeq:NP_596692.1
ProteinModelPortal:O94319 STRING:O94319 PRIDE:O94319
EnsemblFungi:SPBC215.15.1 GeneID:2540716 KEGG:spo:SPBC215.15
NextBio:20801838 Uniprot:O94319
Length = 297
Score = 160 (61.4 bits), Expect = 2.0e-11, P = 2.0e-11
Identities = 35/83 (42%), Positives = 49/83 (59%)
Query: 100 SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159
+++ +H D+IHD DYYG R+ATCSSDQ IKV + +ET+ H VW++
Sbjct: 3 TVDTQHDDMIHDAILDYYGKRLATCSSDQTIKVFSIENNQQTLLETL---RGHSGPVWQL 59
Query: 160 SWNIT--GTIVASSGDDGCVRLW 180
W GTI+AS+ DG V +W
Sbjct: 60 GWAHPKFGTILASASYDGHVIVW 82
>SGD|S000004198 [details] [associations]
symbol:SEC13 "Structural component of 3 distinct complexes"
species:4932 "Saccharomyces cerevisiae" [GO:0030433 "ER-associated
protein catabolic process" evidence=IMP] [GO:0031080 "nuclear pore
outer ring" evidence=IDA] [GO:0090114 "COPII-coated vesicle
budding" evidence=IMP] [GO:0030127 "COPII vesicle coat"
evidence=IDA] [GO:0005198 "structural molecule activity"
evidence=IDA;IMP] [GO:0005773 "vacuole" evidence=IEA] [GO:0005774
"vacuolar membrane" evidence=IEA] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0005634
"nucleus" evidence=IEA] [GO:0005643 "nuclear pore" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0016192
"vesicle-mediated transport" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0005789 "endoplasmic reticulum membrane"
evidence=IEA] [GO:0012507 "ER to Golgi transport vesicle membrane"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0016020 "membrane"
evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
[GO:0043547 "positive regulation of GTPase activity" evidence=IDA]
[GO:0035859 "Seh1-associated complex" evidence=IDA] [GO:0031081
"nuclear pore distribution" evidence=IMP] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000004198 GO:GO:0005774
GO:GO:0045893 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789
GO:GO:0043547 GO:GO:0005198 GO:GO:0015031 eggNOG:COG2319
EMBL:BK006945 GO:GO:0030433 GO:GO:0051028 EMBL:U14913 GO:GO:0030127
GO:GO:0031080 GO:GO:0031081 GO:GO:0035859 PDB:3IKO PDBsum:3IKO
PDB:3JRO PDBsum:3JRO GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE OrthoDB:EOG4QNR53
EMBL:L05929 PIR:A45442 RefSeq:NP_013309.1 PDB:2PM6 PDB:2PM7
PDB:2PM9 PDB:3JRP PDB:3MZK PDB:3MZL PDBsum:2PM6 PDBsum:2PM7
PDBsum:2PM9 PDBsum:3JRP PDBsum:3MZK PDBsum:3MZL
ProteinModelPortal:Q04491 SMR:Q04491 DIP:DIP-1826N IntAct:Q04491
MINT:MINT-402427 STRING:Q04491 PaxDb:Q04491 PeptideAtlas:Q04491
EnsemblFungi:YLR208W GeneID:850905 KEGG:sce:YLR208W CYGD:YLR208w
EvolutionaryTrace:Q04491 NextBio:967299 Genevestigator:Q04491
GermOnline:YLR208W GO:GO:0090114 Uniprot:Q04491
Length = 297
Score = 159 (61.0 bits), Expect = 2.5e-11, P = 2.5e-11
Identities = 38/81 (46%), Positives = 46/81 (56%)
Query: 102 NAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSW 161
NA H +LIHD DYYG R+ATCSSD+ IK+ +V G + I H VWRV W
Sbjct: 6 NA-HNELIHDAVLDYYGKRLATCSSDKTIKIF-EVEGETHKL--IDTLTGHEGPVWRVDW 61
Query: 162 NIT--GTIVASSGDDGCVRLW 180
GTI+AS DG V +W
Sbjct: 62 AHPKFGTILASCSYDGKVLIW 82
Score = 98 (39.6 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 30/97 (30%), Positives = 49/97 (50%)
Query: 88 RFNSISIMYEAHSINAEHKDLIHDVAYD-YYGLR--MATCSSDQNIKV-TRDVMGTRFDI 143
++NS + Y S H D + DVA+ LR +A+ S D+ + T+D +
Sbjct: 186 KYNSDAQTYVLESTLEGHSDWVRDVAWSPTVLLRSYLASVSQDRTCIIWTQDNEQGPWK- 244
Query: 144 ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
+T+ E +WR SW+++G ++A SG D V LW
Sbjct: 245 KTLLKEEKFPDVLWRASWSLSGNVLALSGGDNKVTLW 281
Score = 51 (23.0 bits), Expect = 8.7e-05, Sum P(2) = 8.7e-05
Identities = 11/42 (26%), Positives = 22/42 (52%)
Query: 14 QWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYE 55
+W++ + SV V++ P + G +L ++DG V + E
Sbjct: 88 RWSQIAVHAVHSASVNSVQWAPHEYGPLLLVASSDGKVSVVE 129
Score = 48 (22.0 bits), Expect = 0.00018, Sum P(2) = 0.00018
Identities = 13/39 (33%), Positives = 22/39 (56%)
Query: 21 LVDSRTS----VTDVKFGPKQLGLVLATCAADGLVRIYE 55
L+D+ T V V + + G +LA+C+ DG V I++
Sbjct: 45 LIDTLTGHEGPVWRVDWAHPKFGTILASCSYDGKVLIWK 83
>UNIPROTKB|F1SQA9 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005635 "nuclear envelope" evidence=IEA] [GO:0000776
"kinetochore" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005635 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 GeneTree:ENSGT00550000075049 EMBL:CU469341
Ensembl:ENSSSCT00000012664 OMA:REISADH Uniprot:F1SQA9
Length = 158
Score = 150 (57.9 bits), Expect = 9.4e-11, P = 9.4e-11
Identities = 33/85 (38%), Positives = 51/85 (60%)
Query: 99 HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVM-GTRFDIETIGNFEDHYCTVW 157
++++ H+D+IHD DYYG R+ATCSSD+++K+ DV G + I + H VW
Sbjct: 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIF-DVRNGGQI---LIADLRGHEGPVW 61
Query: 158 RVSWN--ITGTIVASSGDDGCVRLW 180
+V+W + G I+AS D V +W
Sbjct: 62 QVAWAHPMYGNILASCSYDRKVIIW 86
>DICTYBASE|DDB_G0292052 [details] [associations]
symbol:sec13 "putative transport protein"
species:44689 "Dictyostelium discoideum" [GO:0003674
"molecular_function" evidence=ND] [GO:0030127 "COPII vesicle coat"
evidence=ISS] [GO:0006888 "ER to Golgi vesicle-mediated transport"
evidence=ISS] [GO:0005643 "nuclear pore" evidence=IEA;ISS]
[GO:0051028 "mRNA transport" evidence=IEA] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0016020 "membrane" evidence=IEA] [GO:0015031
"protein transport" evidence=IEA] [GO:0006810 "transport"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0012507 "ER to Golgi
transport vesicle membrane" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0044351 "macropinocytosis"
evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 dictyBase:DDB_G0292052 GenomeReviews:CM000155_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789
EMBL:AAFI02000187 GO:GO:0015031 eggNOG:COG2319 GO:GO:0005643
GO:GO:0006888 GO:GO:0051028 GO:GO:0030127 KO:K14004 OMA:IKLWKEE
RefSeq:XP_629794.1 ProteinModelPortal:Q54DS8 SMR:Q54DS8
STRING:Q54DS8 PRIDE:Q54DS8 EnsemblProtists:DDB0235182
GeneID:8628472 KEGG:ddi:DDB_G0292052 ProtClustDB:CLSZ2429468
Uniprot:Q54DS8
Length = 301
Score = 140 (54.3 bits), Expect = 3.6e-09, P = 3.6e-09
Identities = 31/83 (37%), Positives = 51/83 (61%)
Query: 100 SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159
++++ H+D++HD +DYYG +ATCSSD+ IK+ DV G + + + + H VW+V
Sbjct: 5 NVDSGHEDMVHDAQFDYYGKFLATCSSDKMIKIF-DVGGE--NPQHLVDLRGHEGPVWQV 61
Query: 160 SWNIT--GTIVASSGDDGCVRLW 180
+W G I+AS+ D V +W
Sbjct: 62 AWAHPKFGKILASASYDRKVIVW 84
Score = 124 (48.7 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 32/82 (39%), Positives = 49/82 (59%)
Query: 104 EHKDLIHDVAY-DYYGL---RMATCSSDQNIKV-TRDVMGTRFDIETIGNFEDHYCTVWR 158
+HKD + DVA+ GL ++A+CS D+++ V T+D G + + + F+D VWR
Sbjct: 207 DHKDWVRDVAWAPNIGLPYSKIASCSQDRSVIVWTQDENGV-WSGKPLPKFDD---IVWR 262
Query: 159 VSWNITGTIVASSGDDGCVRLW 180
VSW++ G I+A S D V LW
Sbjct: 263 VSWSVIGNILAVSCGDNQVTLW 284
Score = 67 (28.6 bits), Expect = 1.9e-10, Sum P(2) = 1.9e-10
Identities = 18/59 (30%), Positives = 27/59 (45%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIY-------EAPDVMNLSQ 64
N W+ SV + + P + GL LA ++DG V I+ EAP + +SQ
Sbjct: 90 NSWSIIHQYAGHELSVNSISWAPHEFGLSLACASSDGSVTIHNYNNNVWEAPQKIQVSQ 148
Score = 49 (22.3 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 13/36 (36%), Positives = 21/36 (58%)
Query: 22 VDS--RTSVTDVKFGPKQLGLVLATCAADGLVRIYE 55
VDS V D +F G LATC++D +++I++
Sbjct: 6 VDSGHEDMVHDAQFD--YYGKFLATCSSDKMIKIFD 39
>MGI|MGI:99832 [details] [associations]
symbol:Sec13 "SEC13 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=ISO] [GO:0005643 "nuclear pore"
evidence=IEA] [GO:0005783 "endoplasmic reticulum" evidence=IEA]
[GO:0006810 "transport" evidence=IEA] [GO:0006888 "ER to Golgi
vesicle-mediated transport" evidence=ISA] [GO:0015031 "protein
transport" evidence=IEA] [GO:0016020 "membrane" evidence=IEA]
[GO:0016192 "vesicle-mediated transport" evidence=IEA] [GO:0031080
"nuclear pore outer ring" evidence=ISO] [GO:0031410 "cytoplasmic
vesicle" evidence=IEA] [GO:0051028 "mRNA transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
MGI:MGI:99832 GO:GO:0012507 GO:GO:0000776 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0006888 GO:GO:0051028 GO:GO:0031080 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OMA:IKLWKEE OrthoDB:EOG40P471
EMBL:AK003354 EMBL:AK009755 EMBL:BC002128 IPI:IPI00133920
RefSeq:NP_077168.2 UniGene:Mm.29296 ProteinModelPortal:Q9D1M0
SMR:Q9D1M0 IntAct:Q9D1M0 STRING:Q9D1M0 PhosphoSite:Q9D1M0
REPRODUCTION-2DPAGE:Q9D1M0 PaxDb:Q9D1M0 PRIDE:Q9D1M0 DNASU:110379
Ensembl:ENSMUST00000032440 GeneID:110379 KEGG:mmu:110379
UCSC:uc009dhm.1 InParanoid:Q9D1M0 NextBio:363887 Bgee:Q9D1M0
CleanEx:MM_SEC13 Genevestigator:Q9D1M0
GermOnline:ENSMUSG00000030298 Uniprot:Q9D1M0
Length = 322
Score = 152 (58.6 bits), Expect = 2.0e-10, P = 2.0e-10
Identities = 35/92 (38%), Positives = 55/92 (59%)
Query: 92 ISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVM-GTRFDIETIGNFE 150
+S+M ++++ H+D+IHD DYYG R+ATCSSD+++K+ DV G + I +
Sbjct: 2 VSVM---NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIF-DVRNGGQI---LIADLR 54
Query: 151 DHYCTVWRVSWN--ITGTIVASSGDDGCVRLW 180
H VW+V+W + G I+AS D V +W
Sbjct: 55 GHEGPVWQVAWAHPMYGNILASCSYDRKVIIW 86
Score = 115 (45.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 32/90 (35%), Positives = 44/90 (48%)
Query: 97 EAHSINAEHKDLIHDVAY-DYYGL---RMATCSSDQNIKVTR--DVMGTRFDIETIGNFE 150
E + A H D + DVA+ GL +A+CS D + + D G + + + F
Sbjct: 204 EEQKLEA-HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFN 262
Query: 151 DHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
D VW VSW+IT I+A SG D V LW
Sbjct: 263 D---VVWHVSWSITANILAVSGGDNKVTLW 289
Score = 52 (23.4 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 14/61 (22%), Positives = 25/61 (40%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRI--YEAPDVMNLSQWCLQHEVA 72
W + +SV V + P GL+LA ++DG + + Y + + H +
Sbjct: 93 WEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIG 152
Query: 73 C 73
C
Sbjct: 153 C 153
Score = 35 (17.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 28 VTDVKFGPKQLGLVLATCAADGLVRIYE 55
V V + G +LA+C+ D V I++
Sbjct: 60 VWQVAWAHPMYGNILASCSYDRKVIIWK 87
>UNIPROTKB|E1BVC4 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0000776 "kinetochore" evidence=IEA] [GO:0005635
"nuclear envelope" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005635 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 CTD:6396
GeneTree:ENSGT00550000075049 KO:K14004 OMA:IKLWKEE
EMBL:AADN02014522 EMBL:AADN02014521 IPI:IPI00586706
RefSeq:XP_414450.3 UniGene:Gga.12581 ProteinModelPortal:E1BVC4
Ensembl:ENSGALT00000013715 GeneID:416119 KEGG:gga:416119
Uniprot:E1BVC4
Length = 320
Score = 150 (57.9 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 33/85 (38%), Positives = 51/85 (60%)
Query: 99 HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVM-GTRFDIETIGNFEDHYCTVW 157
++++ H+D+IHD DYYG R+ATCSSD+++K+ DV G + I + H VW
Sbjct: 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIF-DVRNGGQI---LIADLRGHEGPVW 61
Query: 158 RVSWN--ITGTIVASSGDDGCVRLW 180
+V+W + G I+AS D V +W
Sbjct: 62 QVAWAHPMYGNILASCSYDRKVIIW 86
Score = 116 (45.9 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 32/90 (35%), Positives = 45/90 (50%)
Query: 97 EAHSINAEHKDLIHDVAY-DYYGL---RMATCSSDQNIKVTR--DVMGTRFDIETIGNFE 150
E + A H D + DVA+ GL +A+CS D + + D G+ + + + F
Sbjct: 203 EEQKLEA-HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGSSWSPKLLHKFN 261
Query: 151 DHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
D VW VSW+IT I+A SG D V LW
Sbjct: 262 D---VVWHVSWSITANILAVSGGDNKVTLW 288
Score = 57 (25.1 bits), Expect = 7.2e-08, Sum P(2) = 7.2e-08
Identities = 14/61 (22%), Positives = 25/61 (40%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRI--YEAPDVMNLSQWCLQHEVA 72
W + +SV V + P GL+LA ++DG + + Y + + H +
Sbjct: 93 WEKTYEYTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLSYTGDGQWEVKKISNAHTIG 152
Query: 73 C 73
C
Sbjct: 153 C 153
Score = 35 (17.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 28 VTDVKFGPKQLGLVLATCAADGLVRIYE 55
V V + G +LA+C+ D V I++
Sbjct: 60 VWQVAWAHPMYGNILASCSYDRKVIIWK 87
>UNIPROTKB|F1PDM3 [details] [associations]
symbol:SEC13 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005635 "nuclear envelope" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0005635 GO:GO:0000776
Gene3D:2.130.10.10 SUPFAM:SSF50978 CTD:6396
GeneTree:ENSGT00550000075049 KO:K14004 OMA:IKLWKEE
EMBL:AAEX03012077 RefSeq:XP_850437.1 ProteinModelPortal:F1PDM3
Ensembl:ENSCAFT00000008242 GeneID:607653 KEGG:cfa:607653
NextBio:20893365 Uniprot:F1PDM3
Length = 322
Score = 150 (57.9 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 33/85 (38%), Positives = 51/85 (60%)
Query: 99 HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVM-GTRFDIETIGNFEDHYCTVW 157
++++ H+D+IHD DYYG R+ATCSSD+++K+ DV G + I + H VW
Sbjct: 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIF-DVRNGGQI---LIADLRGHEGPVW 61
Query: 158 RVSWN--ITGTIVASSGDDGCVRLW 180
+V+W + G I+AS D V +W
Sbjct: 62 QVAWAHPMYGNILASCSYDRKVIIW 86
Score = 115 (45.5 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 32/90 (35%), Positives = 44/90 (48%)
Query: 97 EAHSINAEHKDLIHDVAY-DYYGL---RMATCSSDQNIKVTR--DVMGTRFDIETIGNFE 150
E + A H D + DVA+ GL +A+CS D + + D G + + + F
Sbjct: 204 EEQKLEA-HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDTSGNTWSPKLLHKFN 262
Query: 151 DHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
D VW VSW+IT I+A SG D V LW
Sbjct: 263 D---VVWHVSWSITANILAVSGGDNKVTLW 289
Score = 54 (24.1 bits), Expect = 2.3e-07, Sum P(2) = 2.3e-07
Identities = 14/61 (22%), Positives = 25/61 (40%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRI--YEAPDVMNLSQWCLQHEVA 72
W + +SV V + P GL+LA ++DG + + Y + + H +
Sbjct: 93 WEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIG 152
Query: 73 C 73
C
Sbjct: 153 C 153
Score = 35 (17.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 28 VTDVKFGPKQLGLVLATCAADGLVRIYE 55
V V + G +LA+C+ D V I++
Sbjct: 60 VWQVAWAHPMYGNILASCSYDRKVIIWK 87
>RGD|1359555 [details] [associations]
symbol:Sec13 "SEC13 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0005635 "nuclear envelope" evidence=ISO]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0006888 "ER to Golgi vesicle-mediated transport" evidence=IDA]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0015031 "protein transport" evidence=IEA] [GO:0031080 "nuclear
pore outer ring" evidence=ISO;ISS] [GO:0051028 "mRNA transport"
evidence=IEA] [GO:0000776 "kinetochore" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1359555 GO:GO:0012507 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031 eggNOG:COG2319
GO:GO:0006888 GO:GO:0051028 GO:GO:0031080 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OrthoDB:EOG40P471 EMBL:BC084705
IPI:IPI00364566 RefSeq:NP_001006979.1 UniGene:Rn.1553
ProteinModelPortal:Q5XFW8 SMR:Q5XFW8 STRING:Q5XFW8 PRIDE:Q5XFW8
Ensembl:ENSRNOT00000014377 GeneID:297522 KEGG:rno:297522
UCSC:RGD:1359555 InParanoid:Q5XFW8 NextBio:642376
Genevestigator:Q5XFW8 Uniprot:Q5XFW8
Length = 322
Score = 150 (57.9 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 33/85 (38%), Positives = 51/85 (60%)
Query: 99 HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVM-GTRFDIETIGNFEDHYCTVW 157
++++ H+D+IHD DYYG R+ATCSSD+++K+ DV G + I + H VW
Sbjct: 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIF-DVRNGGQI---LIADLRGHEGPVW 61
Query: 158 RVSWN--ITGTIVASSGDDGCVRLW 180
+V+W + G I+AS D V +W
Sbjct: 62 QVAWAHPMYGNILASCSYDRKVIIW 86
Score = 115 (45.5 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 32/90 (35%), Positives = 44/90 (48%)
Query: 97 EAHSINAEHKDLIHDVAY-DYYGL---RMATCSSDQNIKVTR--DVMGTRFDIETIGNFE 150
E + A H D + DVA+ GL +A+CS D + + D G + + + F
Sbjct: 204 EEQKLEA-HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASGNMWSPKLLHKFN 262
Query: 151 DHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
D VW VSW+IT I+A SG D V LW
Sbjct: 263 D---VVWHVSWSITANILAVSGGDNKVTLW 289
Score = 52 (23.4 bits), Expect = 3.7e-07, Sum P(2) = 3.7e-07
Identities = 14/61 (22%), Positives = 25/61 (40%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRI--YEAPDVMNLSQWCLQHEVA 72
W + +SV V + P GL+LA ++DG + + Y + + H +
Sbjct: 93 WEKTHEHSGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIG 152
Query: 73 C 73
C
Sbjct: 153 C 153
Score = 35 (17.4 bits), Expect = 2.0e-05, Sum P(2) = 2.0e-05
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 28 VTDVKFGPKQLGLVLATCAADGLVRIYE 55
V V + G +LA+C+ D V I++
Sbjct: 60 VWQVAWAHPMYGNILASCSYDRKVIIWK 87
>UNIPROTKB|P55735 [details] [associations]
symbol:SEC13 "Protein SEC13 homolog" species:9606 "Homo
sapiens" [GO:0051028 "mRNA transport" evidence=IEA] [GO:0031080
"nuclear pore outer ring" evidence=NAS;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0006886 "intracellular protein transport" evidence=NAS]
[GO:0000776 "kinetochore" evidence=IDA] [GO:0000087 "M phase of
mitotic cell cycle" evidence=TAS] [GO:0000236 "mitotic
prometaphase" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0005789
"endoplasmic reticulum membrane" evidence=TAS] [GO:0005829
"cytosol" evidence=TAS] [GO:0006888 "ER to Golgi vesicle-mediated
transport" evidence=TAS] [GO:0012507 "ER to Golgi transport vesicle
membrane" evidence=TAS] [GO:0016044 "cellular membrane
organization" evidence=TAS] [GO:0018279 "protein N-linked
glycosylation via asparagine" evidence=TAS] [GO:0019886 "antigen
processing and presentation of exogenous peptide antigen via MHC
class II" evidence=TAS] [GO:0043687 "post-translational protein
modification" evidence=TAS] [GO:0044267 "cellular protein metabolic
process" evidence=TAS] [GO:0048208 "COPII vesicle coating"
evidence=TAS] Reactome:REACT_11123 Reactome:REACT_17015
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 Reactome:REACT_6900 Reactome:REACT_115566
GO:GO:0006886 GO:GO:0012507 GO:GO:0002474 Reactome:REACT_21300
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0019886
GO:GO:0005789 eggNOG:COG2319 GO:GO:0043687 GO:GO:0018279
GO:GO:0051028 GO:GO:0000236 GO:GO:0048208 GO:GO:0031080 PDB:3BG0
PDB:3BG1 PDBsum:3BG0 PDBsum:3BG1 CTD:6396 HOGENOM:HOG000216895
HOVERGEN:HBG057343 KO:K14004 OrthoDB:EOG40P471 EMBL:L09260
EMBL:BC002634 EMBL:BC006167 EMBL:BC091506 IPI:IPI00479141
RefSeq:NP_001129704.1 RefSeq:NP_899195.1 UniGene:Hs.166924
ProteinModelPortal:P55735 SMR:P55735 DIP:DIP-39091N IntAct:P55735
MINT:MINT-1154053 STRING:P55735 PhosphoSite:P55735 DMDM:50403748
PaxDb:P55735 PRIDE:P55735 DNASU:6396 Ensembl:ENST00000337354
Ensembl:ENST00000350697 GeneID:6396 KEGG:hsa:6396 UCSC:uc003bvl.3
GeneCards:GC03M010335 HGNC:HGNC:10697 HPA:HPA035292 MIM:600152
neXtProt:NX_P55735 PharmGKB:PA35620 InParanoid:P55735
EvolutionaryTrace:P55735 GenomeRNAi:6396 NextBio:24846
ArrayExpress:P55735 Bgee:P55735 CleanEx:HS_SEC13
Genevestigator:P55735 GermOnline:ENSG00000157020 Uniprot:P55735
Length = 322
Score = 150 (57.9 bits), Expect = 3.3e-10, P = 3.3e-10
Identities = 33/85 (38%), Positives = 51/85 (60%)
Query: 99 HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVM-GTRFDIETIGNFEDHYCTVW 157
++++ H+D+IHD DYYG R+ATCSSD+++K+ DV G + I + H VW
Sbjct: 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIF-DVRNGGQI---LIADLRGHEGPVW 61
Query: 158 RVSWN--ITGTIVASSGDDGCVRLW 180
+V+W + G I+AS D V +W
Sbjct: 62 QVAWAHPMYGNILASCSYDRKVIIW 86
Score = 109 (43.4 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 31/90 (34%), Positives = 43/90 (47%)
Query: 97 EAHSINAEHKDLIHDVAY-DYYGL---RMATCSSDQNIKVTR--DVMGTRFDIETIGNFE 150
E + A H D + DVA+ GL +A+CS D + + D + + + F
Sbjct: 204 EEQKLEA-HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFIWTCDDASSNTWSPKLLHKFN 262
Query: 151 DHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
D VW VSW+IT I+A SG D V LW
Sbjct: 263 D---VVWHVSWSITANILAVSGGDNKVTLW 289
Score = 54 (24.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 14/61 (22%), Positives = 25/61 (40%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRI--YEAPDVMNLSQWCLQHEVA 72
W + +SV V + P GL+LA ++DG + + Y + + H +
Sbjct: 93 WEKSHEHAGHDSSVNSVCWAPHDYGLILACGSSDGAISLLTYTGEGQWEVKKINNAHTIG 152
Query: 73 C 73
C
Sbjct: 153 C 153
Score = 36 (17.7 bits), Expect = 0.00012, Sum P(2) = 0.00012
Identities = 13/45 (28%), Positives = 19/45 (42%)
Query: 28 VTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
V V + G +LA+C+ D V I+ + W HE A
Sbjct: 60 VWQVAWAHPMYGNILASCSYDRKVIIWREEN----GTWEKSHEHA 100
>ZFIN|ZDB-GENE-040426-2649 [details] [associations]
symbol:sec13 "SEC13 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0003674 "molecular_function"
evidence=ND] [GO:0055123 "digestive system development"
evidence=IMP] [GO:0001889 "liver development" evidence=IMP]
[GO:0070971 "endoplasmic reticulum exit site" evidence=IDA]
[GO:0007029 "endoplasmic reticulum organization" evidence=IMP]
[GO:0051216 "cartilage development" evidence=IMP] [GO:0006888 "ER
to Golgi vesicle-mediated transport" evidence=ISS] [GO:0070278
"extracellular matrix constituent secretion" evidence=IMP]
[GO:0005622 "intracellular" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 ZFIN:ZDB-GENE-040426-2649
Gene3D:2.130.10.10 SUPFAM:SSF50978 GO:GO:0001889 GO:GO:0051216
GO:GO:0006888 GO:GO:0007029 GO:GO:0055123 GO:GO:0070278
GO:GO:0070971 CTD:6396 GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 HOVERGEN:HBG057343 KO:K14004 EMBL:BX537350
EMBL:BC054585 EMBL:BC153483 EMBL:CT027575 IPI:IPI00513236
RefSeq:NP_998500.1 UniGene:Dr.5496 STRING:Q7T2E1
Ensembl:ENSDART00000077063 GeneID:798071 KEGG:dre:798071
InParanoid:Q7T2E1 OMA:ISWAPAT NextBio:20933269 Uniprot:Q7T2E1
Length = 320
Score = 149 (57.5 bits), Expect = 4.2e-10, P = 4.2e-10
Identities = 30/84 (35%), Positives = 49/84 (58%)
Query: 99 HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWR 158
++++ H+D+IHD DYYG R+ATCSSD+++K+ G + + + H VW+
Sbjct: 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIFDVKNGGQI---LVADLRGHEGPVWQ 62
Query: 159 VSWN--ITGTIVASSGDDGCVRLW 180
V+W + G I+AS D V +W
Sbjct: 63 VAWAHPMYGNILASCSYDRKVIIW 86
Score = 115 (45.5 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 30/82 (36%), Positives = 41/82 (50%)
Query: 105 HKDLIHDVAY-DYYGL---RMATCSSDQNIKVTR--DVMGTRFDIETIGNFEDHYCTVWR 158
H D + DV + GL +A+CS D + + D G + + + F D VW
Sbjct: 210 HSDWVRDVGWAPSIGLPTSTIASCSQDGRVFIWTCDDPAGNTWTAKLLHKFND---VVWH 266
Query: 159 VSWNITGTIVASSGDDGCVRLW 180
VSW+ITG I+A SG D V LW
Sbjct: 267 VSWSITGNILAVSGGDNKVTLW 288
Score = 61 (26.5 bits), Expect = 4.2e-08, Sum P(2) = 4.2e-08
Identities = 12/39 (30%), Positives = 20/39 (51%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRI 53
W + +SV V +GP GL+LA ++DG + +
Sbjct: 93 WDKMYEYTGHDSSVNSVCWGPYDFGLILACGSSDGAISV 131
>UNIPROTKB|Q3ZCC9 [details] [associations]
symbol:SEC13 "Protein SEC13 homolog" species:9913 "Bos
taurus" [GO:0031080 "nuclear pore outer ring" evidence=ISS]
[GO:0012507 "ER to Golgi transport vesicle membrane" evidence=IEA]
[GO:0005789 "endoplasmic reticulum membrane" evidence=IEA]
[GO:0000776 "kinetochore" evidence=IEA] [GO:0051028 "mRNA
transport" evidence=IEA] [GO:0016192 "vesicle-mediated transport"
evidence=IEA] [GO:0015031 "protein transport" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0012507 GO:GO:0000776 GO:GO:0016192 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789 GO:GO:0015031
eggNOG:COG2319 GO:GO:0051028 GO:GO:0031080 EMBL:BC102514
IPI:IPI00691005 RefSeq:NP_001069033.1 UniGene:Bt.62595
ProteinModelPortal:Q3ZCC9 SMR:Q3ZCC9 STRING:Q3ZCC9 PRIDE:Q3ZCC9
Ensembl:ENSBTAT00000023702 GeneID:512530 KEGG:bta:512530 CTD:6396
GeneTree:ENSGT00550000075049 HOGENOM:HOG000216895
HOVERGEN:HBG057343 InParanoid:Q3ZCC9 KO:K14004 OMA:IKLWKEE
OrthoDB:EOG40P471 NextBio:20870435 Uniprot:Q3ZCC9
Length = 322
Score = 149 (57.5 bits), Expect = 4.3e-10, P = 4.3e-10
Identities = 32/85 (37%), Positives = 51/85 (60%)
Query: 99 HSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVM-GTRFDIETIGNFEDHYCTVW 157
++++ H+D+IHD DYYG R+ATCSSD+++K+ DV G + + + H VW
Sbjct: 6 NTVDTSHEDMIHDAQMDYYGTRLATCSSDRSVKIF-DVRNGGQI---LVADLRGHEGPVW 61
Query: 158 RVSWN--ITGTIVASSGDDGCVRLW 180
+V+W + G I+AS D V +W
Sbjct: 62 QVAWAHPMYGNILASCSYDRKVIIW 86
Score = 116 (45.9 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 33/90 (36%), Positives = 44/90 (48%)
Query: 97 EAHSINAEHKDLIHDVAY-DYYGL---RMATCSSDQNIKVTR--DVMGTRFDIETIGNFE 150
E + A H D + DVA+ GL +A+CS D + V D G + + + F
Sbjct: 204 EEQKLEA-HSDWVRDVAWAPSIGLPTSTIASCSQDGRVFVWTCDDASGNTWSPKLLHKFN 262
Query: 151 DHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
D VW VSW+IT I+A SG D V LW
Sbjct: 263 D---VVWHVSWSITANILAVSGGDNKVTLW 289
Score = 56 (24.8 bits), Expect = 9.3e-08, Sum P(2) = 9.3e-08
Identities = 14/51 (27%), Positives = 22/51 (43%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQW 65
W + +SV V + P GL+LA ++DG + + L QW
Sbjct: 93 WEKTHEHTGHDSSVNSVCWAPHDYGLILACGSSDGAISLLT---YTGLGQW 140
Score = 35 (17.4 bits), Expect = 1.3e-05, Sum P(2) = 1.3e-05
Identities = 9/28 (32%), Positives = 15/28 (53%)
Query: 28 VTDVKFGPKQLGLVLATCAADGLVRIYE 55
V V + G +LA+C+ D V I++
Sbjct: 60 VWQVAWAHPMYGNILASCSYDRKVIIWK 87
>TAIR|locus:2045648 [details] [associations]
symbol:AT2G30050 "AT2G30050" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005829 "cytosol" evidence=RCA] [GO:0005635
"nuclear envelope" evidence=IDA] [GO:0005643 "nuclear pore"
evidence=IDA] [GO:0006098 "pentose-phosphate shunt" evidence=RCA]
[GO:0009651 "response to salt stress" evidence=RCA] [GO:0006900
"membrane budding" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 EMBL:CP002685
GenomeReviews:CT485783_GR GO:GO:0005730 Gene3D:2.130.10.10
SUPFAM:SSF50978 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0005643 EMBL:AC004680 EMBL:AC004165 UniGene:At.25577
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE EMBL:AF412112
EMBL:AY124848 IPI:IPI00529872 PIR:T00593 RefSeq:NP_180566.1
UniGene:At.74333 ProteinModelPortal:O64740 SMR:O64740 IntAct:O64740
STRING:O64740 PaxDb:O64740 PRIDE:O64740 ProMEX:O64740
EnsemblPlants:AT2G30050.1 GeneID:817556 KEGG:ath:AT2G30050
TAIR:At2g30050 InParanoid:O64740 PhylomeDB:O64740
ProtClustDB:CLSN2683847 ArrayExpress:O64740 Genevestigator:O64740
Uniprot:O64740
Length = 302
Score = 145 (56.1 bits), Expect = 1.0e-09, P = 1.0e-09
Identities = 33/82 (40%), Positives = 44/82 (53%)
Query: 101 INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160
I H+D++HDV DYYG R+AT SSD IK+T + + + H VW V+
Sbjct: 6 IETGHEDIVHDVQMDYYGKRIATASSDCTIKITG--VSNNGGSQQLATLTGHRGPVWEVA 63
Query: 161 WNIT--GTIVASSGDDGCVRLW 180
W G+I+AS DG V LW
Sbjct: 64 WAHPKYGSILASCSYDGQVILW 85
Score = 95 (38.5 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 27/80 (33%), Positives = 43/80 (53%)
Query: 104 EHKDLIHDVAY-DYYGLRMATCSS-DQNIKVTRDVMGTRFDIETIGN-FEDHYCTVWRVS 160
+H D + DVA+ GL +T +S Q+ KV +G + + G +D VWRVS
Sbjct: 208 KHTDWVRDVAWAPNLGLPKSTIASGSQDGKVIIWTVGKEGE-QWEGKVLKDFMTPVWRVS 266
Query: 161 WNITGTIVASSGDDGCVRLW 180
W++TG ++A S + V +W
Sbjct: 267 WSLTGNLLAVSDGNNNVTVW 286
Score = 83 (34.3 bits), Expect = 1.2e-07, Sum P(2) = 1.2e-07
Identities = 15/44 (34%), Positives = 26/44 (59%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEA 56
NQWT+ D ++SV + + P +GL LA ++DG + ++ A
Sbjct: 91 NQWTQDHVFTDHKSSVNSIAWAPHDIGLSLACGSSDGNISVFTA 134
Score = 60 (26.2 bits), Expect = 2.8e-05, Sum P(2) = 2.8e-05
Identities = 15/51 (29%), Positives = 26/51 (50%)
Query: 19 SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQH 69
+ L R V +V + + G +LA+C+ DG V +++ N +QW H
Sbjct: 50 ATLTGHRGPVWEVAWAHPKYGSILASCSYDGQVILWKEG---NQNQWTQDH 97
>TAIR|locus:2100267 [details] [associations]
symbol:AT3G01340 "AT3G01340" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0006886 "intracellular
protein transport" evidence=ISS] [GO:0005829 "cytosol"
evidence=IDA] [GO:0006900 "membrane budding" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0005829 EMBL:CP002686 Gene3D:2.130.10.10 SUPFAM:SSF50978
InterPro:IPR020472 PRINTS:PR00320 EMBL:AC010676
HOGENOM:HOG000216895 KO:K14004 ProtClustDB:CLSN2683847
EMBL:AF370262 EMBL:AY063079 IPI:IPI00528696 RefSeq:NP_001030616.1
RefSeq:NP_186783.1 UniGene:At.18565 ProteinModelPortal:Q9SRI1
SMR:Q9SRI1 IntAct:Q9SRI1 STRING:Q9SRI1 PRIDE:Q9SRI1 ProMEX:Q9SRI1
DNASU:821216 EnsemblPlants:AT3G01340.1 EnsemblPlants:AT3G01340.2
GeneID:821216 KEGG:ath:AT3G01340 TAIR:At3g01340 InParanoid:Q9SRI1
OMA:KIDQAHP PhylomeDB:Q9SRI1 ArrayExpress:Q9SRI1
Genevestigator:Q9SRI1 Uniprot:Q9SRI1
Length = 302
Score = 139 (54.0 bits), Expect = 4.7e-09, P = 4.7e-09
Identities = 32/82 (39%), Positives = 43/82 (52%)
Query: 101 INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160
I H D IHDV DYYG R+AT SSD IK+T + + + H VW+V+
Sbjct: 6 IETGHSDTIHDVVMDYYGKRVATASSDCTIKITG--VSNSGGSQHLATLTGHRGPVWQVA 63
Query: 161 WNIT--GTIVASSGDDGCVRLW 180
W G+++AS DG + LW
Sbjct: 64 WAHPKFGSLLASCSYDGQIILW 85
Score = 91 (37.1 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 17/44 (38%), Positives = 26/44 (59%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEA 56
NQWT+ D + SV + + P +LGL LA A+DG + ++ A
Sbjct: 91 NQWTQAHVFTDHKVSVNSIAWAPHELGLSLACGASDGNISVFSA 134
Score = 91 (37.1 bits), Expect = 6.0e-08, Sum P(2) = 6.0e-08
Identities = 26/80 (32%), Positives = 43/80 (53%)
Query: 104 EHKDLIHDVAY-DYYGLRMATCSS-DQNIKVTRDVMGTRFDIETIGN-FEDHYCTVWRVS 160
+H D + DVA+ GL +T +S ++ KV +G + + G +D VWRVS
Sbjct: 208 KHTDWVRDVAWAPNLGLPKSTIASGSEDGKVIIWTIGKEGE-QWEGTVLKDFKTPVWRVS 266
Query: 161 WNITGTIVASSGDDGCVRLW 180
W++TG ++A S + V +W
Sbjct: 267 WSLTGNLLAVSDGNNNVTVW 286
Score = 55 (24.4 bits), Expect = 0.00029, Sum P(2) = 0.00029
Identities = 14/51 (27%), Positives = 25/51 (49%)
Query: 19 SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQH 69
+ L R V V + + G +LA+C+ DG + +++ N +QW H
Sbjct: 50 ATLTGHRGPVWQVAWAHPKFGSLLASCSYDGQIILWKEG---NQNQWTQAH 97
>FB|FBgn0024509 [details] [associations]
symbol:Sec13 "Sec13 ortholog (S. cerevisiae)" species:7227
"Drosophila melanogaster" [GO:0006900 "membrane budding"
evidence=ISS] [GO:0008363 "larval chitin-based cuticle development"
evidence=IMP] [GO:0035293 "chitin-based larval cuticle pattern
formation" evidence=IMP] [GO:0010629 "negative regulation of gene
expression" evidence=IDA] [GO:0031080 "nuclear pore outer ring"
evidence=ISS] [GO:0007184 "SMAD protein import into nucleus"
evidence=IMP] [GO:0006607 "NLS-bearing substrate import into
nucleus" evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 eggNOG:COG2319
GO:GO:0010629 GO:GO:0007184 GO:GO:0035293 EMBL:AF160909
ProteinModelPortal:Q7KLW8 STRING:Q7KLW8 PaxDb:Q7KLW8 PRIDE:Q7KLW8
FlyBase:FBgn0024509 InParanoid:Q7KLW8 OrthoDB:EOG46T1H2
ArrayExpress:Q7KLW8 Bgee:Q7KLW8 Uniprot:Q7KLW8
Length = 386
Score = 141 (54.7 bits), Expect = 4.9e-09, P = 4.9e-09
Identities = 31/91 (34%), Positives = 53/91 (58%)
Query: 92 ISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFED 151
+S++ E I+ EH+D++H A D+YGL +ATCSSD ++++ +R + + + +
Sbjct: 32 VSLLQE---IDTEHEDMVHHAALDFYGLLLATCSSDGSVRIFH----SRKNNKALAELKG 84
Query: 152 HYCTVWRVSWNIT--GTIVASSGDDGCVRLW 180
H VW+V+W G I+AS D V +W
Sbjct: 85 HQGPVWQVAWAHPKFGNILASCSYDRKVIVW 115
Score = 111 (44.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 30/89 (33%), Positives = 48/89 (53%)
Query: 97 EAHSINAEHKDLIHDVAY-DYYGL---RMATCSSDQNIKV-TRDVMGTRFDIETIGNFED 151
E H + A H D + DVA+ GL ++AT S D+++ V + + + + + F+D
Sbjct: 234 EEHRLEA-HSDWVRDVAWAPSIGLPRSQIATASQDRHVIVWSSNADLSEWTSTVLHTFDD 292
Query: 152 HYCTVWRVSWNITGTIVASSGDDGCVRLW 180
VW +SW+ TG I+A +G D V LW
Sbjct: 293 ---AVWSISWSTTGNILAVTGGDNNVTLW 318
Score = 74 (31.1 bits), Expect = 1.4e-08, Sum P(2) = 1.4e-08
Identities = 15/39 (38%), Positives = 22/39 (56%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRI 53
WT+ + +SV V F P + GLVLA ++DG V +
Sbjct: 123 WTKLYEYSNHDSSVNSVDFAPSEYGLVLACASSDGSVSV 161
Score = 37 (18.1 bits), Expect = 8.9e-05, Sum P(2) = 8.9e-05
Identities = 8/29 (27%), Positives = 17/29 (58%)
Query: 28 VTDVKFGPKQLGLVLATCAADGLVRIYEA 56
V V + + G +LA+C+ D V ++++
Sbjct: 89 VWQVAWAHPKFGNILASCSYDRKVIVWKS 117
>TAIR|locus:2014210 [details] [associations]
symbol:SEH1H "AT1G64350" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005635 "nuclear envelope" evidence=IDA]
[GO:0006626 "protein targeting to mitochondrion" evidence=RCA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=RCA] [GO:0043248 "proteasome assembly" evidence=RCA]
[GO:0051788 "response to misfolded protein" evidence=RCA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
EMBL:CP002684 GO:GO:0005635 Gene3D:2.130.10.10 SUPFAM:SSF50978
KO:K14299 EMBL:AF370222 EMBL:AY059116 IPI:IPI00519579
RefSeq:NP_564830.1 UniGene:At.25592 ProteinModelPortal:Q93VR9
SMR:Q93VR9 STRING:Q93VR9 PRIDE:Q93VR9 EnsemblPlants:AT1G64350.1
GeneID:842741 KEGG:ath:AT1G64350 TAIR:At1g64350 InParanoid:Q93VR9
OMA:WAPNIGR PhylomeDB:Q93VR9 ProtClustDB:CLSN2689020
ArrayExpress:Q93VR9 Genevestigator:Q93VR9 Uniprot:Q93VR9
Length = 326
Score = 99 (39.9 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 16/52 (30%), Positives = 32/52 (61%)
Query: 129 NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
++ + D+ G R ++ + + H VW++ W+++G +AS+G DG V+LW
Sbjct: 257 HVGLAPDLEG-RLPVKKVSSLSGHQGEVWQMEWDMSGMTLASTGSDGMVKLW 307
Score = 84 (34.6 bits), Expect = 3.6e-08, Sum P(2) = 3.6e-08
Identities = 16/57 (28%), Positives = 30/57 (52%)
Query: 14 QWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHE 70
+W ++ + + V DV+FG + L + +DG +R++E + + L W LQ E
Sbjct: 96 EWKLCKSMKNKSSQVLDVQFGVSRKSLKMVAAYSDGYLRVFELLNPLELKNWQLQAE 152
Score = 44 (20.5 bits), Expect = 0.00044, Sum P(2) = 0.00044
Identities = 13/46 (28%), Positives = 23/46 (50%)
Query: 24 SRTSVTDVKFGPKQLGLVLATCAADGLVRIYE--APDVMNLSQWCL 67
S +S+ + + P + G +A DG + I+E + D L +W L
Sbjct: 55 SESSIVKIVWLPSEYGDAVACVCEDGSLSIWEELSEDAHGL-EWKL 99
>UNIPROTKB|B3RNR8 [details] [associations]
symbol:TRIADDRAFT_20668 "Probable cytosolic iron-sulfur
protein assembly protein" species:10228 "Trichoplax adhaerens"
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:DS985242
RefSeq:XP_002109895.1 ProteinModelPortal:B3RNR8 STRING:B3RNR8
EnsemblMetazoa:TriadT20668 GeneID:6751110 KEGG:tad:TRIADDRAFT_20668
Uniprot:B3RNR8
Length = 313
Score = 132 (51.5 bits), Expect = 6.1e-08, P = 6.1e-08
Identities = 49/180 (27%), Positives = 79/180 (43%)
Query: 13 NQWTRRSNLVDSRT-SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQ-HE 70
+QWT +S L + T ++ V + P G LA+C+ D + I+ D L+ HE
Sbjct: 32 DQWTCKSILTEGHTRTIRSVAWSP--CGNYLASCSFDATICIWSKKDGDFECMATLEGHE 89
Query: 71 --VACPTLASCLTWNHSFSRFNSISIM--------YEAHSINAEHKDLIHDVAYDYYGLR 120
V C +S + S SR S I YE S+ +H + V +
Sbjct: 90 NEVKCVNWSSSGVYLASCSRDKSAWIWEFIEEDEEYECASVLTDHSQDVKHVVWSPKENA 149
Query: 121 MATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
+ + S D IK+ ++V D E H TVW +S++ +G + S GDD +++W
Sbjct: 150 LVSASYDNTIKIYKEVDD---DWECSHTLIGHESTVWSLSFHSSGELFVSCGDDKVLKIW 206
>UNIPROTKB|B5X9P2 [details] [associations]
symbol:ciao1a "Probable cytosolic iron-sulfur protein
assembly protein ciao1-A" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT047761
ProteinModelPortal:B5X9P2 Uniprot:B5X9P2
Length = 330
Score = 127 (49.8 bits), Expect = 9.7e-07, P = 9.7e-07
Identities = 46/160 (28%), Positives = 78/160 (48%)
Query: 39 GLVLATCAADGLVRI--------YEAPDVMNLSQWCLQHEVACPT---LASCLTWNHSFS 87
G LATC+ D V I YE V+N ++H V PT LASC +++++
Sbjct: 117 GNQLATCSRDKSVWIWEVDEEDEYECVSVVNSHTQDVKHVVWHPTQELLASC-SYDNNVC 175
Query: 88 RFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVM-GTRFD---- 142
+ +E + H + + +D G R+A+CS D+ +K+ ++ G D
Sbjct: 176 VYKEEDDDWECRATLEGHTSTVWGLTFDPSGQRLASCSDDRTVKIWKECQPGGGQDTAWK 235
Query: 143 -IETIGNFEDHYCTVWRVSW-NITGTIVASSGDDGCVRLW 180
+ T+ F H TV+ ++W +TG + + GDDG VR++
Sbjct: 236 CVCTLSGF--HGRTVYDIAWCPLTGALATACGDDG-VRVF 272
>MGI|MGI:2441730 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1X-linked receptor 1"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=ISO;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IC]
[GO:0005876 "spindle microtubule" evidence=ISO] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IMP] [GO:0044212 "transcription
regulatory region DNA binding" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IMP]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0060070 "canonical
Wnt receptor signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:2441730 GO:GO:0017053
GO:GO:0003714 GO:GO:0045892 GO:GO:0005654 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024 KO:K04508
CTD:79718 HOGENOM:HOG000220902 HOVERGEN:HBG050240 OMA:LANNHAD
OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 EMBL:AF268195 EMBL:AK029595
EMBL:AK033347 EMBL:AK036064 EMBL:AK136255 EMBL:BC018512
IPI:IPI00308283 RefSeq:NP_109657.2 UniGene:Mm.202966
UniGene:Mm.446265 ProteinModelPortal:Q8BHJ5 SMR:Q8BHJ5
IntAct:Q8BHJ5 STRING:Q8BHJ5 PhosphoSite:Q8BHJ5 PaxDb:Q8BHJ5
PRIDE:Q8BHJ5 DNASU:81004 Ensembl:ENSMUST00000063988 GeneID:81004
KEGG:mmu:81004 InParanoid:Q8BHJ5 NextBio:350342 Bgee:Q8BHJ5
CleanEx:MM_TBL1XR1 Genevestigator:Q8BHJ5
GermOnline:ENSMUSG00000027630 Uniprot:Q8BHJ5
Length = 514
Score = 127 (49.8 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 52/188 (27%), Positives = 88/188 (46%)
Query: 2 GPSPLQSEKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMN 61
GP+ L C+ + + V S VT + + + G +LAT + DG RI+ N
Sbjct: 205 GPTQLVLRHCIREGGQD---VPSNKDVTSLDWNSE--GTLLATGSYDGFARIWTKDG--N 257
Query: 62 LSQWCLQHEVACPTLASCLTWNH--SF---SRFNSISIMYEAHSINAEHKDLIHDVA--- 113
L+ QH+ P A L WN +F + + +I+++AH+ A+ + H
Sbjct: 258 LASTLGQHKG--PIFA--LKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALD 313
Query: 114 YDYYGLR-MATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG 172
D+ A+CS+D I V + +G I+T F+ H V + W+ TG ++AS
Sbjct: 314 VDWQSNNTFASCSTDMCIHVCK--LGQDRPIKT---FQGHTNEVNAIKWDPTGNLLASCS 368
Query: 173 DDGCVRLW 180
DD +++W
Sbjct: 369 DDMTLKIW 376
>RGD|1560053 [details] [associations]
symbol:Tbl1xr1 "transducin (beta)-like 1 X-linked receptor 1"
species:10116 "Rattus norvegicus" [GO:0000118 "histone deacetylase
complex" evidence=IEA;ISO] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=IEA;ISO] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005634 "nucleus" evidence=ISO] [GO:0005876
"spindle microtubule" evidence=IEA;ISO] [GO:0008013 "beta-catenin
binding" evidence=IEA;ISO] [GO:0008150 "biological_process"
evidence=ND] [GO:0017053 "transcriptional repressor complex"
evidence=IEA;ISO] [GO:0042393 "histone binding" evidence=IEA;ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA;ISO] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0047485
"protein N-terminus binding" evidence=IEA;ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA;ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 RGD:1560053 GO:GO:0017053 GO:GO:0003714
GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513
GO:GO:0060070 GO:GO:0005876 EMBL:CH473961 GO:GO:0000118
GeneTree:ENSGT00690000102024 KO:K04508 CTD:79718 OrthoDB:EOG412M5M
IPI:IPI00367976 RefSeq:NP_001102411.1 UniGene:Rn.140831
Ensembl:ENSRNOT00000015573 GeneID:365755 KEGG:rno:365755
UCSC:RGD:1560053 NextBio:687981 Uniprot:D3ZNF4
Length = 514
Score = 127 (49.8 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 52/188 (27%), Positives = 88/188 (46%)
Query: 2 GPSPLQSEKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMN 61
GP+ L C+ + + V S VT + + + G +LAT + DG RI+ N
Sbjct: 205 GPTQLVLRHCIREGGQD---VPSNKDVTSLDWNSE--GTLLATGSYDGFARIWTKDG--N 257
Query: 62 LSQWCLQHEVACPTLASCLTWNH--SF---SRFNSISIMYEAHSINAEHKDLIHDVA--- 113
L+ QH+ P A L WN +F + + +I+++AH+ A+ + H
Sbjct: 258 LASTLGQHKG--PIFA--LKWNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALD 313
Query: 114 YDYYGLR-MATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSG 172
D+ A+CS+D I V + +G I+T F+ H V + W+ TG ++AS
Sbjct: 314 VDWQSNNTFASCSTDMCIHVCK--LGQDRPIKT---FQGHTNEVNAIKWDPTGNLLASCS 368
Query: 173 DDGCVRLW 180
DD +++W
Sbjct: 369 DDMTLKIW 376
>UNIPROTKB|Q28DW0 [details] [associations]
symbol:ciao1 "Probable cytosolic iron-sulfur protein
assembly protein ciao1" species:8364 "Xenopus (Silurana)
tropicalis" [GO:0016226 "iron-sulfur cluster assembly"
evidence=ISS] [GO:0097361 "CIA complex" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
HOGENOM:HOG000208901 HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:CR848572 EMBL:BC127279 RefSeq:NP_001016887.1
UniGene:Str.66175 ProteinModelPortal:Q28DW0 STRING:Q28DW0
Ensembl:ENSXETT00000009442 GeneID:549641 KEGG:xtr:549641
Xenbase:XB-GENE-1010751 OMA:EEEYECV Bgee:Q28DW0 Uniprot:Q28DW0
Length = 333
Score = 125 (49.1 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 47/182 (25%), Positives = 83/182 (45%)
Query: 19 SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRI--------YEAPDVMNLSQWCLQHE 70
+ L V V + P G +LATC+ D V + YE V+N ++H
Sbjct: 99 TTLEGHENEVKSVAWAPS--GSLLATCSRDKSVWVWEVDEEEEYECVSVLNSHTQDVKHV 156
Query: 71 VACPT--LASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQ 128
V P L + +++ S + + + H + +A+D G ++ATCS D+
Sbjct: 157 VWHPNQELLASASYDDSVKLYREEEDDWVCCATLEGHTSTVWSLAFDQTGEQLATCSDDK 216
Query: 129 NIKVTRDV----MGTRFD-----IETIGNFEDHYCTVWRVSWN-ITGTIVASSGDDGCVR 178
+++ R + G++ D + T+ + H TV+ V+WN +TG I + GDD VR
Sbjct: 217 TVRIWRQLGTGEQGSKSDPNWKCVCTLTGY--HTRTVYDVNWNHLTGAIATACGDDA-VR 273
Query: 179 LW 180
++
Sbjct: 274 IF 275
>UNIPROTKB|Q5DFU0 [details] [associations]
symbol:Q5DFU0 "Probable cytosolic iron-sulfur protein
assembly protein" species:6182 "Schistosoma japonicum" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0016226 EMBL:AY813584
ProteinModelPortal:Q5DFU0 STRING:Q5DFU0 Uniprot:Q5DFU0
Length = 352
Score = 120 (47.3 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 50/191 (26%), Positives = 87/191 (45%)
Query: 10 KCLNQ-WTRRSNLVDS-RTSVTDVKFGPKQLGLVLATCAADGLVRIYE------APDV-- 59
KC +Q W +L ++ + S+ V + P G +A+ + DG V I++ AP++
Sbjct: 43 KCNDQLWGSSFSLPEAHKKSIRCVTWSP--CGTYIASASFDGTVTIWKISEAHSAPEMEA 100
Query: 60 -MNLSQWCLQHE-VA-CPT---LASC----LTWNHSFSRFNSISIMYEAHSINAEHKDLI 109
++L + + VA CP+ +A+C W F + + S+ H +
Sbjct: 101 LVSLEGHTSEVKCVAWCPSGHLIATCGRDKSVWLWEFDDEEDVQCV----SVLQPHSQDV 156
Query: 110 HDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVA 169
VA+ +G + + S D I V R+ + D H TVW+ ++ +G I+A
Sbjct: 157 KSVAWHPHGEVLVSTSYDNKINVYREELD---DWTVFAQLSGHDSTVWKAEFSPSGDILA 213
Query: 170 SSGDDGCVRLW 180
S DD CV+LW
Sbjct: 214 SCSDDLCVKLW 224
Score = 35 (17.4 bits), Expect = 4.2e-06, Sum P(2) = 4.2e-06
Identities = 4/13 (30%), Positives = 9/13 (69%)
Query: 168 VASSGDDGCVRLW 180
+ ++ DDG ++ W
Sbjct: 334 LTTASDDGYIKFW 346
>ZFIN|ZDB-GENE-040426-839 [details] [associations]
symbol:ciao1 "cytosolic iron-sulfur protein
assembly 1 homolog (S. cerevisiae)" species:7955 "Danio rerio"
[GO:0003674 "molecular_function" evidence=ND] [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 ZFIN:ZDB-GENE-040426-839 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
GO:GO:0016226 HOGENOM:HOG000208901 OMA:SWKCVCT HSSP:P63005 CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BX323451 EMBL:BC044534 EMBL:BC065658
EMBL:BC171538 EMBL:BC171540 IPI:IPI00496663 RefSeq:NP_956441.2
UniGene:Dr.83731 ProteinModelPortal:Q6P0D9 STRING:Q6P0D9
PRIDE:Q6P0D9 Ensembl:ENSDART00000082256 GeneID:795104
KEGG:dre:795104 InParanoid:Q6P0D9 NextBio:20932107 Bgee:Q6P0D9
Uniprot:Q6P0D9
Length = 330
Score = 123 (48.4 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 42/160 (26%), Positives = 78/160 (48%)
Query: 39 GLVLATCAADGLVRI--------YEAPDVMNLSQWCLQHEVACPT--LASCLTWNHSFSR 88
G +LATC+ D V I YE V+N ++H V PT L + ++++
Sbjct: 117 GSLLATCSRDKSVWIWEVDEEDEYECLSVVNSHTQDVKHVVWHPTQELLASASYDNKICI 176
Query: 89 FNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVM---GTRFD--- 142
+ +E + H+ + + +D G R+A+CS D+ +K+ ++ G+ +
Sbjct: 177 YKEEDDDWECRATLEGHESTVWSLTFDPEGRRLASCSDDRTVKIWKESTTGDGSSDESWK 236
Query: 143 -IETIGNFEDHYCTVWRVSW-NITGTIVASSGDDGCVRLW 180
I T+ F H T++ ++W +TG + + GDDG VR++
Sbjct: 237 CICTLSGF--HGRTIYDIAWCRLTGALATACGDDG-VRVF 273
>ZFIN|ZDB-GENE-040426-1192 [details] [associations]
symbol:tbl1xr1 "transducin (beta)-like 1 X-linked
receptor 1" species:7955 "Danio rerio" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 ZFIN:ZDB-GENE-040426-1192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
EMBL:CT027646 IPI:IPI00854144 Ensembl:ENSDART00000085132
Bgee:F1Q5U2 Uniprot:F1Q5U2
Length = 511
Score = 124 (48.7 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 49/168 (29%), Positives = 80/168 (47%)
Query: 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81
V S VT + + + G +LAT + DG RI+ NL+ QH+ P A L
Sbjct: 218 VPSNKDVTSLDWNSE--GTLLATGSYDGFARIWTKDG--NLASTLGQHKG--PIFA--LK 269
Query: 82 WNH--SF---SRFNSISIMYEAHSINAEHKDLIHDVA---YDYYGLR-MATCSSDQNIKV 132
WN +F + + +I+++AH+ A+ + H D+ A+CS+D I V
Sbjct: 270 WNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHV 329
Query: 133 TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
+ +G I+T F+ H V + W+ TG ++AS DD ++LW
Sbjct: 330 CK--LGQERPIKT---FQGHTNEVNAIKWDPTGNLLASCSDDMTLKLW 372
>WB|WBGene00003806 [details] [associations]
symbol:npp-20 species:6239 "Caenorhabditis elegans"
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0002119 "nematode larval development"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0010171 "body morphogenesis" evidence=IMP] [GO:0006898
"receptor-mediated endocytosis" evidence=IMP] [GO:0032940
"secretion by cell" evidence=IMP] [GO:0006997 "nucleus
organization" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0012507 GO:GO:0002119
GO:GO:0032940 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 eggNOG:COG2319 GO:GO:0010171 GO:GO:0040011
GO:GO:0000003 GO:GO:0005643 GO:GO:0000910 GO:GO:0051028
GO:GO:0006997 GO:GO:0051169 GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE EMBL:FO081581
RefSeq:NP_500086.1 RefSeq:NP_500087.1 ProteinModelPortal:Q9N4A7
SMR:Q9N4A7 DIP:DIP-25859N IntAct:Q9N4A7 MINT:MINT-1089120
STRING:Q9N4A7 PaxDb:Q9N4A7 PRIDE:Q9N4A7 EnsemblMetazoa:Y77E11A.13a
GeneID:176957 KEGG:cel:CELE_Y77E11A.13 UCSC:Y77E11A.13b CTD:176957
WormBase:Y77E11A.13a WormBase:Y77E11A.13b InParanoid:Q9N4A7
NextBio:894734 ArrayExpress:Q9N4A7 Uniprot:Q9N4A7
Length = 313
Score = 121 (47.7 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 30/84 (35%), Positives = 46/84 (54%)
Query: 101 INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTR-DVMGTRFDI-ETIGNFEDHYCTVWR 158
I+ +H+D IHD + YG R+ATC SD+ +K+ G + + E +G H VW+
Sbjct: 8 IDTQHRDAIHDAQLNIYGSRLATCGSDRLVKIFEVRPNGQSYPMAELVG----HSGPVWK 63
Query: 159 VSWNIT--GTIVASSGDDGCVRLW 180
VSW G ++AS+ D V +W
Sbjct: 64 VSWAHPKYGGLLASASYDKKVIIW 87
>UNIPROTKB|Q9N4A7 [details] [associations]
symbol:npp-20 "Protein SEC13 homolog" species:6239
"Caenorhabditis elegans" [GO:0003674 "molecular_function"
evidence=ND] [GO:0051169 "nuclear transport" evidence=IC]
[GO:0000910 "cytokinesis" evidence=IMP] [GO:0005643 "nuclear pore"
evidence=IDA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0009792 GO:GO:0006898 GO:GO:0040007
GO:GO:0040010 GO:GO:0006915 GO:GO:0012507 GO:GO:0002119
GO:GO:0032940 Gene3D:2.130.10.10 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 eggNOG:COG2319 GO:GO:0010171 GO:GO:0040011
GO:GO:0000003 GO:GO:0005643 GO:GO:0000910 GO:GO:0051028
GO:GO:0006997 GO:GO:0051169 GeneTree:ENSGT00550000075049
HOGENOM:HOG000216895 KO:K14004 OMA:IKLWKEE EMBL:FO081581
RefSeq:NP_500086.1 RefSeq:NP_500087.1 ProteinModelPortal:Q9N4A7
SMR:Q9N4A7 DIP:DIP-25859N IntAct:Q9N4A7 MINT:MINT-1089120
STRING:Q9N4A7 PaxDb:Q9N4A7 PRIDE:Q9N4A7 EnsemblMetazoa:Y77E11A.13a
GeneID:176957 KEGG:cel:CELE_Y77E11A.13 UCSC:Y77E11A.13b CTD:176957
WormBase:Y77E11A.13a WormBase:Y77E11A.13b InParanoid:Q9N4A7
NextBio:894734 ArrayExpress:Q9N4A7 Uniprot:Q9N4A7
Length = 313
Score = 121 (47.7 bits), Expect = 7.9e-06, P = 7.9e-06
Identities = 30/84 (35%), Positives = 46/84 (54%)
Query: 101 INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTR-DVMGTRFDI-ETIGNFEDHYCTVWR 158
I+ +H+D IHD + YG R+ATC SD+ +K+ G + + E +G H VW+
Sbjct: 8 IDTQHRDAIHDAQLNIYGSRLATCGSDRLVKIFEVRPNGQSYPMAELVG----HSGPVWK 63
Query: 159 VSWNIT--GTIVASSGDDGCVRLW 180
VSW G ++AS+ D V +W
Sbjct: 64 VSWAHPKYGGLLASASYDKKVIIW 87
>UNIPROTKB|B5X212 [details] [associations]
symbol:ciao1b "Probable cytosolic iron-sulfur protein
assembly protein ciao1-B" species:8030 "Salmo salar" [GO:0016226
"iron-sulfur cluster assembly" evidence=ISS] [GO:0097361 "CIA
complex" evidence=ISS] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0016226 GO:GO:0097361 EMBL:BT045081
ProteinModelPortal:B5X212 Uniprot:B5X212
Length = 333
Score = 120 (47.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 46/163 (28%), Positives = 78/163 (47%)
Query: 39 GLVLATCAADGLVRI--------YEAPDVMNLSQWCLQHEVACPT---LASCLTWNHSFS 87
G +LATC+ D V I YE V+N ++H V PT LASC +++++
Sbjct: 117 GNLLATCSRDKSVWIWEVDEENEYECVSVVNSHTQDVKHVVWHPTQELLASC-SYDNNVC 175
Query: 88 RFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVM------GTRF 141
+ +E + H + + +D G R+A+CS D +K+ ++ GT
Sbjct: 176 VYKEEDDDWECRATLEGHTSTVWGLTFDPSGQRLASCSDDCTVKIWKECQPEGGQEGTDA 235
Query: 142 D---IETIGNFEDHYCTVWRVSW-NITGTIVASSGDDGCVRLW 180
+ T+ F H TV+ ++W +TG + + GDDG VR++
Sbjct: 236 AWKCVCTLSGF--HGRTVYDIAWCPLTGALATACGDDG-VRVF 275
>UNIPROTKB|A8XJ40 [details] [associations]
symbol:npp-20 "Protein SEC13 homolog" species:6238
"Caenorhabditis briggsae" [GO:0000910 "cytokinesis" evidence=ISS]
[GO:0005643 "nuclear pore" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 GO:GO:0012507 GO:GO:0016192
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678 GO:GO:0005789
GO:GO:0015031 eggNOG:COG2319 GO:GO:0005643 GO:GO:0000910
GO:GO:0051028 HOGENOM:HOG000216895 EMBL:HE601467
ProteinModelPortal:A8XJ40 STRING:A8XJ40 EnsemblMetazoa:CBG13889
WormBase:CBG13889 Uniprot:A8XJ40
Length = 306
Score = 119 (46.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 29/82 (35%), Positives = 43/82 (52%)
Query: 101 INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160
I+ +H+D IHD + YG R+ATC SD+ +K+ +V I H VW+VS
Sbjct: 8 IDTQHRDAIHDAQLNIYGNRLATCGSDRLVKIF-EVRPNGQSYPLI-ELSGHNGPVWKVS 65
Query: 161 WNIT--GTIVASSGDDGCVRLW 180
W G ++AS+ D V +W
Sbjct: 66 WAHPKYGGLLASASYDKKVIIW 87
Score = 78 (32.5 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 19/52 (36%), Positives = 25/52 (48%)
Query: 14 QWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQW 65
+W + SVT V F P Q GL+LA+ +ADG + I D QW
Sbjct: 93 RWQKTYEWETHEASVTSVAFAPHQFGLMLASSSADGTIGILRF-DAQT-QQW 142
Score = 70 (29.7 bits), Expect = 0.00038, Sum P(2) = 0.00038
Identities = 20/82 (24%), Positives = 39/82 (47%)
Query: 105 HKDLIHDVAY---DYYGLR-MATCSSDQNIKVTR--DVMGTRFDIETIGNFEDHYCTVWR 158
HKD + + A+ G + +C D N+ + R D+ + + + E C ++
Sbjct: 203 HKDFVREAAWCPVTNKGQHSIVSCGLDGNLVLYRIADIETAEWKSKLL---EQAPCALYH 259
Query: 159 VSWNITGTIVASSGDDGCVRLW 180
S++ G+ ++ SGDD + LW
Sbjct: 260 ASFSPCGSFLSVSGDDNMITLW 281
>UNIPROTKB|E3NCB9 [details] [associations]
symbol:Cre-npp-20 "CRE-NPP-20 protein" species:31234
"Caenorhabditis remanei" [GO:0000910 "cytokinesis" evidence=ISS]
[GO:0005643 "nuclear pore" evidence=ISS] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 Gene3D:2.130.10.10 SUPFAM:SSF50978
GO:GO:0005643 GO:GO:0000910 OMA:IKLWKEE EMBL:DS268594
RefSeq:XP_003093969.1 ProteinModelPortal:E3NCB9
EnsemblMetazoa:CRE15709 GeneID:9811680 CTD:9811680 Uniprot:E3NCB9
Length = 311
Score = 119 (46.9 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 29/82 (35%), Positives = 43/82 (52%)
Query: 101 INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160
I+ +H+D IHD + YG R+ATC SD+ +K+ +V I H VW+VS
Sbjct: 8 IDTQHRDAIHDAQLNIYGNRLATCGSDRLVKIF-EVRPNGQSYPLI-ELSGHNGPVWKVS 65
Query: 161 WNIT--GTIVASSGDDGCVRLW 180
W G ++AS+ D V +W
Sbjct: 66 WAHPKYGGLLASAAYDKKVIIW 87
>UNIPROTKB|Q9BZK7 [details] [associations]
symbol:TBL1XR1 "F-box-like/WD repeat-containing protein
TBL1XR1" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0060070 "canonical Wnt receptor signaling
pathway" evidence=IMP] [GO:0003714 "transcription corepressor
activity" evidence=IGI;IDA] [GO:0042393 "histone binding"
evidence=IDA] [GO:0017053 "transcriptional repressor complex"
evidence=IDA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISS;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043161 "proteasomal
ubiquitin-dependent protein catabolic process" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=IDA] [GO:0000118
"histone deacetylase complex" evidence=IDA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0007219 "Notch signaling pathway"
evidence=TAS] [GO:0044255 "cellular lipid metabolic process"
evidence=TAS] [GO:0044281 "small molecule metabolic process"
evidence=TAS] [GO:0005730 "nucleolus" evidence=IDA]
Reactome:REACT_111217 InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
Reactome:REACT_111102 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0044281 EMBL:CH471052 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0007219
GO:GO:0044255 GO:GO:0006351 GO:GO:0016568 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393
GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AF314544 EMBL:AF268193
EMBL:AK022956 EMBL:BC060320 EMBL:BC113421 IPI:IPI00002922
RefSeq:NP_078941.2 UniGene:Hs.581171 ProteinModelPortal:Q9BZK7
SMR:Q9BZK7 IntAct:Q9BZK7 STRING:Q9BZK7 PhosphoSite:Q9BZK7
DMDM:23396874 PaxDb:Q9BZK7 PRIDE:Q9BZK7 Ensembl:ENST00000430069
Ensembl:ENST00000457928 GeneID:79718 KEGG:hsa:79718 UCSC:uc003fiw.4
CTD:79718 GeneCards:GC03M176737 H-InvDB:HIX0147994 HGNC:HGNC:29529
HPA:HPA019182 MIM:608628 neXtProt:NX_Q9BZK7 PharmGKB:PA134928556
HOGENOM:HOG000220902 HOVERGEN:HBG050240 InParanoid:Q9BZK7
OMA:LANNHAD OrthoDB:EOG412M5M ChiTaRS:TBL1XR1 GenomeRNAi:79718
NextBio:69065 PMAP-CutDB:Q9BZK7 ArrayExpress:Q9BZK7 Bgee:Q9BZK7
CleanEx:HS_TBL1XR1 Genevestigator:Q9BZK7 GermOnline:ENSG00000177565
Uniprot:Q9BZK7
Length = 514
Score = 120 (47.3 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 48/168 (28%), Positives = 80/168 (47%)
Query: 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81
V S VT + + + G +LAT + DG RI+ NL+ QH+ P A L
Sbjct: 222 VPSNKDVTSLDWNSE--GTLLATGSYDGFARIWTKDG--NLASTLGQHKG--PIFA--LK 273
Query: 82 WNH--SF---SRFNSISIMYEAHSINAEHKDLIHDVA---YDYYGLR-MATCSSDQNIKV 132
WN +F + + +I+++AH+ A+ + H D+ A+CS+D I V
Sbjct: 274 WNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHV 333
Query: 133 TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
+ +G I+T F+ H V + W+ TG ++AS DD +++W
Sbjct: 334 CK--LGQDRPIKT---FQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
>UNIPROTKB|F1SGD0 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0017053 GO:GO:0003714 GO:GO:0043161
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 OMA:GYARIWM
EMBL:CU856317 Ensembl:ENSSSCT00000012871 Uniprot:F1SGD0
Length = 514
Score = 120 (47.3 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 48/168 (28%), Positives = 80/168 (47%)
Query: 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81
V S VT + + + G +LAT + DG RI+ NL+ QH+ P A L
Sbjct: 222 VPSNKDVTSLDWNSE--GTLLATGSYDGFARIWTKDG--NLASTLGQHKG--PIFA--LK 273
Query: 82 WNH--SF---SRFNSISIMYEAHSINAEHKDLIHDVA---YDYYGLR-MATCSSDQNIKV 132
WN +F + + +I+++AH+ A+ + H D+ A+CS+D I V
Sbjct: 274 WNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHV 333
Query: 133 TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
+ +G I+T F+ H V + W+ TG ++AS DD +++W
Sbjct: 334 CK--LGQDRPIKT---FQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
>UNIPROTKB|F1NYZ8 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0000118 "histone deacetylase complex"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0008013 "beta-catenin
binding" evidence=IEA] [GO:0017053 "transcriptional repressor
complex" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0044212 "transcription regulatory region
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0047485 "protein N-terminus binding" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0000122 GO:GO:0044212 InterPro:IPR011047 SUPFAM:SSF50998
InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070 GO:GO:0005876
GO:GO:0000118 GeneTree:ENSGT00690000102024 EMBL:AADN02020878
EMBL:AADN02020879 EMBL:AADN02020880 EMBL:AADN02020881
EMBL:AADN02020882 EMBL:AADN02020883 EMBL:AADN02020884
EMBL:AADN02020885 EMBL:AADN02020886 EMBL:AADN02020887
EMBL:AADN02020888 EMBL:AADN02020889 EMBL:AADN02020890
EMBL:AADN02020891 EMBL:AADN02020892 EMBL:AADN02020893
EMBL:AADN02020894 EMBL:AADN02020895 EMBL:AADN02020896
EMBL:AADN02020897 EMBL:AADN02020898 IPI:IPI00594570
Ensembl:ENSGALT00000001912 ArrayExpress:F1NYZ8 Uniprot:F1NYZ8
Length = 517
Score = 120 (47.3 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 48/168 (28%), Positives = 80/168 (47%)
Query: 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81
V S VT + + + G +LAT + DG RI+ NL+ QH+ P A L
Sbjct: 222 VPSNKDVTSLDWNSE--GTLLATGSYDGFARIWTKDG--NLASTLGQHKG--PIFA--LK 273
Query: 82 WNH--SF---SRFNSISIMYEAHSINAEHKDLIHDVA---YDYYGLR-MATCSSDQNIKV 132
WN +F + + +I+++AH+ A+ + H D+ A+CS+D I V
Sbjct: 274 WNKKGNFILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQSNNTFASCSTDMCIHV 333
Query: 133 TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
+ +G I+T F+ H V + W+ TG ++AS DD +++W
Sbjct: 334 CK--LGQDRPIKT---FQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
>UNIPROTKB|Q4R8H1 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9541 "Macaca fascicularis" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0005876 "spindle microtubule" evidence=ISS]
[GO:0006508 "proteolysis" evidence=ISS] [GO:0007605 "sensory
perception of sound" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0006508 GO:GO:0006351 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 HSSP:P16649 EMBL:AB168481
ProteinModelPortal:Q4R8H1 Uniprot:Q4R8H1
Length = 569
Score = 120 (47.3 bits), Expect = 3.1e-05, P = 3.1e-05
Identities = 48/168 (28%), Positives = 78/168 (46%)
Query: 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81
V S VT + + G +LAT + DG RI+ NL+ QH+ P A L
Sbjct: 277 VPSNKDVTSLDWNTN--GTLLATGSYDGFARIWTEDG--NLASTLGQHKG--PIFA--LK 328
Query: 82 WNHSFSRFNSI-----SIMYEAHSINAEHKDLIHDV-AYDY---YGLRMATCSSDQNIKV 132
WN + S +I+++AH+ A+ + H A D + A+CS+D I V
Sbjct: 329 WNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHV 388
Query: 133 TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
R +G ++T F+ H V + W+ +G ++AS DD +++W
Sbjct: 389 CR--LGCDRPVKT---FQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 431
>UNIPROTKB|F1MFJ6 [details] [associations]
symbol:TBL1XR1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0017053 "transcriptional repressor complex" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=IEA] [GO:0005876
"spindle microtubule" evidence=IEA] [GO:0003714 "transcription
corepressor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000118 "histone deacetylase complex"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0000122
GO:GO:0044212 InterPro:IPR013720 Pfam:PF08513 GO:GO:0060070
GO:GO:0005876 GO:GO:0000118 GeneTree:ENSGT00690000102024
EMBL:DAAA02002018 EMBL:DAAA02002019 EMBL:DAAA02002020
EMBL:DAAA02002021 EMBL:DAAA02002022 EMBL:DAAA02002023
EMBL:DAAA02002024 IPI:IPI00732449 UniGene:Bt.25104
ProteinModelPortal:F1MFJ6 Ensembl:ENSBTAT00000029211 OMA:GYARIWM
NextBio:20899067 Uniprot:F1MFJ6
Length = 514
Score = 117 (46.2 bits), Expect = 6.9e-05, P = 6.9e-05
Identities = 48/168 (28%), Positives = 79/168 (47%)
Query: 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81
V S VT + + + G +LAT + DG RI+ NL+ QH+ P A L
Sbjct: 222 VPSNKDVTSLDWNSE--GTLLATGSYDGFARIWTKDG--NLASTLGQHKG--PIFA--LK 273
Query: 82 WNH--SF---SRFNSISIMYEAHSINAEHKDLIHDVA---YDYYGLR-MATCSSDQNIKV 132
WN +F + + +I+++AH+ A+ H D+ A+CS+D I V
Sbjct: 274 WNKKGNFILSAGVDKTTIIWDAHTGEAKQLFPFHSAPALDVDWQSNNTFASCSTDMCIHV 333
Query: 133 TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
+ +G I+T F+ H V + W+ TG ++AS DD +++W
Sbjct: 334 CK--LGQDRPIKT---FQGHTNEVNAIKWDPTGNLLASCSDDMTLKIW 376
>UNIPROTKB|O60907 [details] [associations]
symbol:TBL1X "F-box-like/WD repeat-containing protein
TBL1X" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=IMP] [GO:0003714 "transcription
corepressor activity" evidence=IGI;IDA] [GO:0042393 "histone
binding" evidence=IDA] [GO:0017053 "transcriptional repressor
complex" evidence=IDA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006508 "proteolysis" evidence=IMP] [GO:0008022 "protein
C-terminus binding" evidence=IPI] [GO:0005876 "spindle microtubule"
evidence=IDA] [GO:0000118 "histone deacetylase complex"
evidence=IDA] [GO:0019904 "protein domain specific binding"
evidence=IPI] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=IPI] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IDA] [GO:0043161 "proteasomal ubiquitin-dependent
protein catabolic process" evidence=ISS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0007219 "Notch signaling pathway" evidence=TAS] [GO:0044255
"cellular lipid metabolic process" evidence=TAS] [GO:0044281 "small
molecule metabolic process" evidence=TAS] Reactome:REACT_111217
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 Reactome:REACT_111102
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 GO:GO:0044281
eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944
GO:GO:0007219 GO:GO:0044255 GO:GO:0006351 GO:GO:0000122
GO:GO:0044212 GO:GO:0007605 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0060070 GO:GO:0005876 KO:K04508 EMBL:AC003036
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M
EMBL:Y12781 EMBL:AK289409 EMBL:AK290962 EMBL:BC032708 EMBL:BC052304
IPI:IPI00218132 IPI:IPI00640917 RefSeq:NP_001132938.1
RefSeq:NP_001132939.1 RefSeq:NP_001132940.1 RefSeq:NP_005638.1
UniGene:Hs.495656 PDB:2XTC PDB:2XTD PDB:2XTE PDBsum:2XTC
PDBsum:2XTD PDBsum:2XTE ProteinModelPortal:O60907 SMR:O60907
IntAct:O60907 STRING:O60907 PhosphoSite:O60907 PaxDb:O60907
PRIDE:O60907 Ensembl:ENST00000217964 Ensembl:ENST00000380961
Ensembl:ENST00000407597 Ensembl:ENST00000424279
Ensembl:ENST00000536365 GeneID:6907 KEGG:hsa:6907 UCSC:uc004csq.4
CTD:6907 GeneCards:GC0XP009431 HGNC:HGNC:11585 HPA:CAB005363
MIM:300196 neXtProt:NX_O60907 PharmGKB:PA36349 InParanoid:O60907
OMA:RAHSVNN PhylomeDB:O60907 ChiTaRS:TBL1X EvolutionaryTrace:O60907
GenomeRNAi:6907 NextBio:27011 ArrayExpress:O60907 Bgee:O60907
CleanEx:HS_TBL1X Genevestigator:O60907 GermOnline:ENSG00000101849
Uniprot:O60907
Length = 577
Score = 117 (46.2 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 48/168 (28%), Positives = 77/168 (45%)
Query: 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81
V S VT + + G +LAT + DG RI+ NL+ QH+ P A L
Sbjct: 285 VPSNKDVTSLDWNTN--GTLLATGSYDGFARIWTEDG--NLASTLGQHKG--PIFA--LK 336
Query: 82 WNHSFSRFNSI-----SIMYEAHSINAEHKDLIHDV-AYDY---YGLRMATCSSDQNIKV 132
WN + S +I+++AH+ A+ + H A D A+CS+D I V
Sbjct: 337 WNRKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHV 396
Query: 133 TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
R +G ++T F+ H V + W+ +G ++AS DD +++W
Sbjct: 397 CR--LGCDRPVKT---FQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 439
>TAIR|locus:2123752 [details] [associations]
symbol:AT4G32990 "AT4G32990" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0008150 "biological_process"
evidence=ND] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002687 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 IPI:IPI00532927 RefSeq:NP_195025.5 UniGene:At.54584
ProteinModelPortal:F4JVW1 SMR:F4JVW1 EnsemblPlants:AT4G32990.1
GeneID:829436 KEGG:ath:AT4G32990 OMA:WKLASEP Uniprot:F4JVW1
Length = 328
Score = 113 (44.8 bits), Expect = 0.00011, P = 0.00011
Identities = 38/154 (24%), Positives = 71/154 (46%)
Query: 28 VTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWC-LQHEVACPTLASCLTWNHSF 86
V +V + P G V+A+C+AD VRI+E + S C L H + +C+ W +
Sbjct: 23 VWNVAWNPAADG-VIASCSADKTVRIWEQSSLTR-SWTCKLGHRLGSFDGNTCV-WENFA 79
Query: 87 SRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETI 146
+ S+S++ H+ + V+++ G +ATC D+++ + + +TI
Sbjct: 80 TDSESVSVL-------RGHESEVKSVSWNASGSLLATCGRDKSVWIWEIQPEEDDEFDTI 132
Query: 147 GNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
H V V W+ T ++ S D +++W
Sbjct: 133 AVLTGHSEDVKMVLWHPTMDVLFSCSYDNTIKIW 166
>UNIPROTKB|E1BV27 [details] [associations]
symbol:TBL1X "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003714
"transcription corepressor activity" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0043161
"proteasomal ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0045944 GO:GO:0003682 GO:GO:0005667
GO:GO:0044212 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0045444 GeneTree:ENSGT00690000102024 KO:K04508 CTD:6907
OMA:RAHSVNN EMBL:AADN02017315 EMBL:AADN02017316 EMBL:AADN02017317
EMBL:AADN02017318 EMBL:AADN02017319 EMBL:AADN02017320
EMBL:AADN02017321 EMBL:AADN02017322 EMBL:AADN02017323
EMBL:AADN02017324 IPI:IPI00589153 RefSeq:NP_001153226.1
UniGene:Gga.5909 ProteinModelPortal:E1BV27
Ensembl:ENSGALT00000021808 GeneID:426045 KEGG:gga:426045
NextBio:20827776 Uniprot:E1BV27
Length = 523
Score = 115 (45.5 bits), Expect = 0.00013, P = 0.00013
Identities = 48/168 (28%), Positives = 77/168 (45%)
Query: 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81
V S VT + + G +LAT + DG RI+ NL+ QH+ P A L
Sbjct: 231 VPSNKDVTSLDWNSD--GTLLATGSYDGFARIWTEDG--NLASTLGQHKG--PIFA--LK 282
Query: 82 WNHSFSRFNSI-----SIMYEAHSINAEHKDLIHDV-AYDY---YGLRMATCSSDQNIKV 132
WN + S +I+++AH+ A+ + H A D A+CS+D I V
Sbjct: 283 WNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHV 342
Query: 133 TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
R +G ++T F+ H V + W+ +G ++AS DD +++W
Sbjct: 343 CR--LGCDRPVKT---FQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 385
>MGI|MGI:1336172 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0003714 "transcription corepressor
activity" evidence=ISO;IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0005876 "spindle
microtubule" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0006508 "proteolysis" evidence=ISO] [GO:0007605 "sensory
perception of sound" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008022 "protein C-terminus binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0017053 "transcriptional repressor complex"
evidence=ISO] [GO:0019904 "protein domain specific binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=ISO]
[GO:0043161 "proteasomal ubiquitin-dependent protein catabolic
process" evidence=IMP] [GO:0043627 "response to estrogen stimulus"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO;IDA] [GO:0045444 "fat cell differentiation"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO;IMP] [GO:0048545 "response to steroid hormone
stimulus" evidence=IMP] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=ISO] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR006594 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 PROSITE:PS50896
SMART:SM00320 SMART:SM00667 MGI:MGI:1336172 GO:GO:0003714
GO:GO:0045892 GO:GO:0043161 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006351
GO:GO:0003682 GO:GO:0005667 GO:GO:0044212 GO:GO:0043627
InterPro:IPR013720 Pfam:PF08513 GO:GO:0045444
GeneTree:ENSGT00690000102024 KO:K04508 HOGENOM:HOG000220902
OrthoDB:EOG412M5M CTD:6907 EMBL:AK030547 EMBL:AK031937
EMBL:AK038674 EMBL:BC043105 EMBL:F38006 IPI:IPI00223056
RefSeq:NP_065626.1 UniGene:Mm.258476 ProteinModelPortal:Q9QXE7
SMR:Q9QXE7 STRING:Q9QXE7 PhosphoSite:Q9QXE7 PaxDb:Q9QXE7
PRIDE:Q9QXE7 Ensembl:ENSMUST00000088217 GeneID:21372 KEGG:mmu:21372
InParanoid:Q9QXE7 NextBio:300588 Bgee:Q9QXE7 CleanEx:MM_TBL1X
Genevestigator:Q9QXE7 GermOnline:ENSMUSG00000025246 Uniprot:Q9QXE7
Length = 527
Score = 115 (45.5 bits), Expect = 0.00013, P = 0.00013
Identities = 48/168 (28%), Positives = 77/168 (45%)
Query: 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81
V S VT + + G +LAT + DG RI+ NL+ QH+ P A L
Sbjct: 235 VPSNKDVTSLDWNSD--GTLLATGSYDGFARIWTEDG--NLASTLGQHKG--PIFA--LK 286
Query: 82 WNHSFSRFNSI-----SIMYEAHSINAEHKDLIHDV-AYDY---YGLRMATCSSDQNIKV 132
WN + S +I+++AH+ A+ + H A D A+CS+D I V
Sbjct: 287 WNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHV 346
Query: 133 TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
R +G ++T F+ H V + W+ +G ++AS DD +++W
Sbjct: 347 CR--LGCDRPVKT---FQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 389
>RGD|1563868 [details] [associations]
symbol:Tbl1x "transducin (beta)-like 1 X-linked" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003674 "molecular_function" evidence=ND] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA;ISO] [GO:0003714 "transcription corepressor activity"
evidence=IEA;ISO] [GO:0005575 "cellular_component" evidence=ND]
[GO:0005634 "nucleus" evidence=ISO] [GO:0005667 "transcription
factor complex" evidence=IEA;ISO] [GO:0005876 "spindle microtubule"
evidence=ISO] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006508 "proteolysis"
evidence=ISO] [GO:0007605 "sensory perception of sound"
evidence=ISO] [GO:0008013 "beta-catenin binding" evidence=ISO]
[GO:0008022 "protein C-terminus binding" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=ISO] [GO:0008150
"biological_process" evidence=ND] [GO:0017053 "transcriptional
repressor complex" evidence=ISO] [GO:0019904 "protein domain
specific binding" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA;ISO] [GO:0043627 "response to
estrogen stimulus" evidence=IEA;ISO] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA;ISO] [GO:0045444 "fat
cell differentiation" evidence=IEA;ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IEA;ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA;ISO] [GO:0048545
"response to steroid hormone stimulus" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0000118 "histone deacetylase complex" evidence=ISO]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 RGD:1563868
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 InterPro:IPR020472 PRINTS:PR00320
InterPro:IPR013720 Pfam:PF08513 GeneTree:ENSGT00690000102024
KO:K04508 EMBL:CH473966 CTD:6907 RefSeq:NP_001100434.1
UniGene:Rn.107002 SMR:G3V6G5 Ensembl:ENSRNOT00000004901
GeneID:302711 KEGG:rno:302711 NextBio:650027 Uniprot:G3V6G5
Length = 527
Score = 115 (45.5 bits), Expect = 0.00013, P = 0.00013
Identities = 48/168 (28%), Positives = 77/168 (45%)
Query: 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81
V S VT + + G +LAT + DG RI+ NL+ QH+ P A L
Sbjct: 235 VPSNKDVTSLDWNSD--GTLLATGSYDGFARIWTEDG--NLASTLGQHKG--PIFA--LK 286
Query: 82 WNHSFSRFNSI-----SIMYEAHSINAEHKDLIHDV-AYDY---YGLRMATCSSDQNIKV 132
WN + S +I+++AH+ A+ + H A D A+CS+D I V
Sbjct: 287 WNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHV 346
Query: 133 TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
R +G ++T F+ H V + W+ +G ++AS DD +++W
Sbjct: 347 CR--LGCDRPVKT---FQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 389
>UNIPROTKB|B7TCI5 [details] [associations]
symbol:TBL1X "Transducin beta-like 1" species:9913 "Bos
taurus" [GO:0006508 "proteolysis" evidence=ISS] [GO:0007605
"sensory perception of sound" evidence=ISS] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0003714 "transcription corepressor activity"
evidence=ISS] [GO:0008013 "beta-catenin binding" evidence=ISS]
[GO:0042393 "histone binding" evidence=ISS] [GO:0005876 "spindle
microtubule" evidence=ISS] [GO:0017053 "transcriptional repressor
complex" evidence=ISS] [GO:0045444 "fat cell differentiation"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=IEA] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0017053 GO:GO:0003714 GO:GO:0043161 Gene3D:2.130.10.10
SUPFAM:SSF50978 PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0045944 GO:GO:0006508
GO:GO:0003682 GO:GO:0005667 GO:GO:0000122 GO:GO:0044212
GO:GO:0007605 GO:GO:0043627 InterPro:IPR013720 Pfam:PF08513
GO:GO:0042393 GO:GO:0045444 GO:GO:0008013 GO:GO:0060070
GO:GO:0005876 GeneTree:ENSGT00690000102024 KO:K04508
HOGENOM:HOG000220902 HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:6907
OMA:RAHSVNN EMBL:FJ195366 EMBL:DAAA02075574 IPI:IPI00717120
RefSeq:NP_001138704.1 UniGene:Bt.27699 STRING:B7TCI5
Ensembl:ENSBTAT00000024105 GeneID:515972 KEGG:bta:515972
NextBio:20872077 Uniprot:B7TCI5
Length = 528
Score = 115 (45.5 bits), Expect = 0.00013, P = 0.00013
Identities = 48/168 (28%), Positives = 77/168 (45%)
Query: 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81
V S VT + + G +LAT + DG RI+ NL+ QH+ P A L
Sbjct: 236 VPSNKDVTSLDWNSD--GTLLATGSYDGFARIWTEDG--NLASTLGQHKG--PIFA--LK 287
Query: 82 WNHSFSRFNSI-----SIMYEAHSINAEHKDLIHDV-AYDY---YGLRMATCSSDQNIKV 132
WN + S +I+++AH+ A+ + H A D A+CS+D I V
Sbjct: 288 WNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHV 347
Query: 133 TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
R +G ++T F+ H V + W+ +G ++AS DD +++W
Sbjct: 348 CR--LGCDRPVKT---FQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 390
>UNIPROTKB|B8YE10 [details] [associations]
symbol:TBL1Y "Transducin (Beta)-like 1Y-linked"
species:9544 "Macaca mulatta" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003714 "transcription corepressor activity" evidence=ISS]
[GO:0005876 "spindle microtubule" evidence=ISS] [GO:0006508
"proteolysis" evidence=ISS] [GO:0007605 "sensory perception of
sound" evidence=ISS] [GO:0008013 "beta-catenin binding"
evidence=ISS] [GO:0017053 "transcriptional repressor complex"
evidence=ISS] [GO:0042393 "histone binding" evidence=ISS]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISS] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR006594
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
PROSITE:PS50896 SMART:SM00320 SMART:SM00667 GO:GO:0017053
GO:GO:0003714 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
GO:GO:0045944 GO:GO:0006508 GO:GO:0000122 GO:GO:0007605
InterPro:IPR013720 Pfam:PF08513 GO:GO:0042393 GO:GO:0008013
GO:GO:0060070 GO:GO:0005876 KO:K04508 HOGENOM:HOG000220902
HOVERGEN:HBG050240 OrthoDB:EOG412M5M CTD:90665 EMBL:FJ527023
RefSeq:NP_001138540.1 UniGene:Mmu.17760 ProteinModelPortal:B8YE10
STRING:B8YE10 GeneID:100270702 KEGG:mcc:100270702 NextBio:19970520
Uniprot:B8YE10
Length = 520
Score = 114 (45.2 bits), Expect = 0.00017, P = 0.00017
Identities = 48/168 (28%), Positives = 77/168 (45%)
Query: 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81
V S VT + + G +LAT + DG RI+ NL+ QH+ P A L
Sbjct: 228 VPSNKDVTSLDWNSD--GTLLATGSYDGFARIWTENG--NLASTLGQHKG--PIFA--LK 279
Query: 82 WNHSFSRFNSI-----SIMYEAHSINAEHKDLIHDV-AYDY---YGLRMATCSSDQNIKV 132
WN + S +I+++AH+ A+ + H A D A+CS+D I V
Sbjct: 280 WNKKGNYILSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNTTFASCSTDMCIHV 339
Query: 133 TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
R +G ++T F+ H V + W+ +G ++AS DD +++W
Sbjct: 340 CR--LGCDRPVKT---FQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 382
>UNIPROTKB|Q9BQ87 [details] [associations]
symbol:TBL1Y "F-box-like/WD repeat-containing protein
TBL1Y" species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR006594 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 PROSITE:PS50896 SMART:SM00320 SMART:SM00667
GO:GO:0005634 GO:GO:0006355 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0006351 InterPro:IPR013720
Pfam:PF08513 KO:K04508 HOGENOM:HOG000220902 HOVERGEN:HBG050240
OrthoDB:EOG412M5M EMBL:AF332220 EMBL:AF332221 EMBL:AF332222
EMBL:CH471163 EMBL:BC130471 EMBL:BC130473 IPI:IPI00020873
RefSeq:NP_150600.1 RefSeq:NP_599020.1 RefSeq:NP_599021.1
UniGene:Hs.664560 ProteinModelPortal:Q9BQ87 SMR:Q9BQ87
STRING:Q9BQ87 PhosphoSite:Q9BQ87 DMDM:23396873 PaxDb:Q9BQ87
PRIDE:Q9BQ87 Ensembl:ENST00000346432 Ensembl:ENST00000355162
Ensembl:ENST00000383032 GeneID:90665 KEGG:hsa:90665 UCSC:uc004frb.3
CTD:90665 GeneCards:GC0YP006778 HGNC:HGNC:18502 MIM:400033
neXtProt:NX_Q9BQ87 PharmGKB:PA38564 InParanoid:Q9BQ87 OMA:VHSYQGT
PhylomeDB:Q9BQ87 GenomeRNAi:90665 NextBio:76909 ArrayExpress:Q9BQ87
Bgee:Q9BQ87 CleanEx:HS_TBL1Y Genevestigator:Q9BQ87
GermOnline:ENSG00000092377 Uniprot:Q9BQ87
Length = 522
Score = 113 (44.8 bits), Expect = 0.00023, P = 0.00023
Identities = 46/168 (27%), Positives = 77/168 (45%)
Query: 22 VDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLT 81
V S VT + + G +LA + DG RI+ NL+ QH+ P A L
Sbjct: 232 VPSNKDVTSLDWNSD--GTLLAMGSYDGFARIWTENG--NLASTLGQHKG--PIFA--LK 283
Query: 82 WNHS-----FSRFNSISIMYEAHSINAEHKDLIHDV-AYDY---YGLRMATCSSDQNIKV 132
WN + + +I+++AH+ A+ + H A D + A+CS+D I V
Sbjct: 284 WNKKGNYVLSAGVDKTTIIWDAHTGEAKQQFPFHSAPALDVDWQNNMTFASCSTDMCIHV 343
Query: 133 TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
R +G ++T F+ H V + W+ +G ++AS DD +++W
Sbjct: 344 CR--LGCDHPVKT---FQGHTNEVNAIKWDPSGMLLASCSDDMTLKIW 386
>UNIPROTKB|A5PKH9 [details] [associations]
symbol:WDR51B "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0042384 "cilium assembly" evidence=IEA] [GO:0005932
"microtubule basal body" evidence=IEA] [GO:0005814 "centriole"
evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319
InterPro:IPR020472 PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 HOVERGEN:HBG057502 KO:K16482
HOGENOM:HOG000036743 CTD:282809 OMA:TASWDTF EMBL:DAAA02012678
EMBL:BC142494 IPI:IPI00690736 RefSeq:NP_001092501.1
UniGene:Bt.54889 Ensembl:ENSBTAT00000000919 GeneID:525136
KEGG:bta:525136 InParanoid:A5PKH9 NextBio:20874107 Uniprot:A5PKH9
Length = 478
Score = 112 (44.5 bits), Expect = 0.00028, P = 0.00028
Identities = 45/175 (25%), Positives = 74/175 (42%)
Query: 12 LNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHE- 70
L R V + +T V+F P LG +LA+ + D +R++ PD S H
Sbjct: 47 LRPQARAFRYVGHKDVITSVQFSP--LGNLLASASRDRTIRLW-IPDKRGKSSEFKAHTA 103
Query: 71 -VACPTLASCLTWNHSFSRFNSISI--MYEAHSINA--EHKDLIHDVAYDYYGLRMATCS 125
V ++ + S S SI + MY + + H + + G + +CS
Sbjct: 104 PVRSVDFSADGQFLASASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIVSCS 163
Query: 126 SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
D+ IK+ D + + NF D V++N GT +AS+G D V++W
Sbjct: 164 EDKTIKIW-DTTNK----QCVNNFSDFVGFANFVAFNPNGTCIASAGSDHTVKIW 213
>UNIPROTKB|F1P8S8 [details] [associations]
symbol:POC1B "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0042384 "cilium assembly" evidence=IEA]
[GO:0005932 "microtubule basal body" evidence=IEA] [GO:0005814
"centriole" evidence=IEA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 GO:GO:0005814 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 InterPro:IPR020472
PRINTS:PR00320 GO:GO:0005932 GO:GO:0042384
GeneTree:ENSGT00700000104282 OMA:TASWDTF EMBL:AAEX03009913
Ensembl:ENSCAFT00000015651 Uniprot:F1P8S8
Length = 478
Score = 112 (44.5 bits), Expect = 0.00028, P = 0.00028
Identities = 48/178 (26%), Positives = 74/178 (41%)
Query: 11 CLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHE 70
C Q R V + VT V+F P LG +LA+ + D VR++ PD S H
Sbjct: 47 CKPQ-ARAFRYVGHKDVVTSVQFSP--LGNLLASASRDRTVRLW-IPDKRGKSSEFKAH- 101
Query: 71 VACPTLASCLTWNHSF----SRFNSISI--MYEAHSINA--EHKDLIHDVAYDYYGLRMA 122
P + + + F S SI + MY + + H + + G +
Sbjct: 102 -TAPVRSVDFSADGQFLATASEDKSIKVWNMYRQRFLYSLYRHTHWVRCAKFSPDGRLIV 160
Query: 123 TCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
+CS D+ IK+ D + + NF D V +N GT +AS+G D V++W
Sbjct: 161 SCSEDKTIKIW-DTTNK----QCVNNFSDSVGFANFVDFNPNGTCIASAGSDHTVKIW 213
>UNIPROTKB|Q32PJ6 [details] [associations]
symbol:CIAO1 "Probable cytosolic iron-sulfur protein
assembly protein CIAO1" species:9913 "Bos taurus" [GO:0097361 "CIA
complex" evidence=ISS] [GO:0071817 "MMXD complex" evidence=ISS]
[GO:0016226 "iron-sulfur cluster assembly" evidence=ISS]
[GO:0007059 "chromosome segregation" evidence=IEA]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226 GO:GO:0071817
HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:BC108091 IPI:IPI00699811
RefSeq:NP_001032559.1 RefSeq:XP_003585196.1 UniGene:Bt.51463
ProteinModelPortal:Q32PJ6 STRING:Q32PJ6 Ensembl:ENSBTAT00000020797
GeneID:100850134 GeneID:540069 KEGG:bta:100850134 KEGG:bta:540069
CTD:9391 GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532
InParanoid:Q32PJ6 OrthoDB:EOG4MCX0N NextBio:20878397 GO:GO:0097361
Uniprot:Q32PJ6
Length = 339
Score = 110 (43.8 bits), Expect = 0.00029, P = 0.00029
Identities = 42/184 (22%), Positives = 81/184 (44%)
Query: 19 SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRI--------YEAPDVMNLSQWCLQHE 70
+ L V V + P G +LATC+ D V + YE V+N ++H
Sbjct: 99 TTLEGHENEVKSVAWAPS--GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHV 156
Query: 71 VACPT--LASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQ 128
V P+ L + +++ + + + + H+ + +A+D G R+A+CS D+
Sbjct: 157 VWHPSQELLASASYDDTVKLYREEEDDWVCCATLEGHESTVWSLAFDPSGQRLASCSDDR 216
Query: 129 NIKVTRDVM-GTRFDIETIGNFEDHYC----------TVWRVSW-NITGTIVASSGDDGC 176
+++ R + G + G+ C T++ V+W +TGT+ + GDD
Sbjct: 217 TVRIWRQYLPGNEQGVACSGSEASWKCVCTLSGFHSRTIYDVAWCQLTGTLATACGDDA- 275
Query: 177 VRLW 180
+R++
Sbjct: 276 IRVF 279
>TAIR|locus:2057381 [details] [associations]
symbol:emb1345 "AT2G26060" species:3702 "Arabidopsis
thaliana" [GO:0000166 "nucleotide binding" evidence=ISS]
[GO:0005737 "cytoplasm" evidence=ISM] [GO:0005834 "heterotrimeric
G-protein complex" evidence=ISS] [GO:0009793 "embryo development
ending in seed dormancy" evidence=NAS] [GO:0000394 "RNA splicing,
via endonucleolytic cleavage and ligation" evidence=RCA]
[GO:0009086 "methionine biosynthetic process" evidence=RCA]
[GO:0010048 "vernalization response" evidence=RCA] [GO:0048573
"photoperiodism, flowering" evidence=RCA] [GO:0051604 "protein
maturation" evidence=RCA] InterPro:IPR017986 InterPro:IPR001680
InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294
SMART:SM00320 EMBL:CP002685 GenomeReviews:CT485783_GR
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 eggNOG:COG2319 InterPro:IPR020472 PRINTS:PR00320
EMBL:AC004747 HOGENOM:HOG000208901 OMA:SWKCVCT EMBL:AY093154
EMBL:AY085277 EMBL:BT003394 IPI:IPI00536484 PIR:T02617
RefSeq:NP_565615.1 UniGene:At.38940 ProteinModelPortal:O80990
SMR:O80990 PaxDb:O80990 PRIDE:O80990 EnsemblPlants:AT2G26060.1
GeneID:817147 KEGG:ath:AT2G26060 TAIR:At2g26060 InParanoid:O80990
PhylomeDB:O80990 ProtClustDB:CLSN2917143 ArrayExpress:O80990
Genevestigator:O80990 Uniprot:O80990
Length = 352
Score = 110 (43.8 bits), Expect = 0.00031, P = 0.00031
Identities = 36/154 (23%), Positives = 72/154 (46%)
Query: 41 VLATCAADGLVRIYEAPDVMNLSQWC--LQHEVACPTLASCLTWNHS-----FSRFNSIS 93
+LA+C+ D VRI+E ++ S C + E T+ SC W+ S + F+ +
Sbjct: 41 ILASCSGDNTVRIWEQSS-LSRSWTCKTVLEETHTRTVRSC-AWSPSGQLLATASFDGTT 98
Query: 94 IMYEAHSINAE-------HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETI 146
+++ + E H++ + V+++ G +ATCS D+++ + + G +D +
Sbjct: 99 GIWKNYGSEFECISTLEGHENEVKSVSWNASGSCLATCSRDKSVWIWEVLEGNEYDCAAV 158
Query: 147 GNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
H V V W+ T ++ S D +++W
Sbjct: 159 --LTGHTQDVKMVQWHPTMDVLFSCSYDNTIKVW 190
>SGD|S000000653 [details] [associations]
symbol:PWP2 "Conserved 90S pre-ribosomal component"
species:4932 "Saccharomyces cerevisiae" [GO:0005730 "nucleolus"
evidence=IEA;IDA] [GO:0000462 "maturation of SSU-rRNA from
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000480 "endonucleolytic cleavage in 5'-ETS of
tricistronic rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000472 "endonucleolytic cleavage to generate
mature 5'-end of SSU-rRNA from (SSU-rRNA, 5.8S rRNA, LSU-rRNA)"
evidence=IMP] [GO:0000447 "endonucleolytic cleavage in ITS1 to
separate SSU-rRNA from 5.8S rRNA and LSU-rRNA from tricistronic
rRNA transcript (SSU-rRNA, 5.8S rRNA, LSU-rRNA)" evidence=IMP]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006364 "rRNA processing"
evidence=IEA] [GO:0030529 "ribonucleoprotein complex" evidence=IEA]
[GO:0030686 "90S preribosome" evidence=IDA] [GO:0032040
"small-subunit processome" evidence=IDA] [GO:0000910 "cytokinesis"
evidence=IMP] [GO:0030010 "establishment of cell polarity"
evidence=IMP] [GO:0034388 "Pwp2p-containing subcomplex of 90S
preribosome" evidence=IDA] [GO:0042254 "ribosome biogenesis"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0030515
"snoRNA binding" evidence=IPI] InterPro:IPR017986
InterPro:IPR001680 InterPro:IPR015943 Pfam:PF00400 PROSITE:PS50082
PROSITE:PS50294 SMART:SM00320 SGD:S000000653 GO:GO:0005737
Gene3D:2.130.10.10 SUPFAM:SSF50978 PROSITE:PS00678
InterPro:IPR019775 GO:GO:0030515 eggNOG:COG2319 InterPro:IPR020472
PRINTS:PR00320 EMBL:X59720 EMBL:BK006937 GO:GO:0000910
InterPro:IPR011047 SUPFAM:SSF50998 GO:GO:0030010 GO:GO:0032040
GO:GO:0000447 GO:GO:0000472 GO:GO:0000480
GeneTree:ENSGT00550000074981 HOGENOM:HOG000160363 KO:K14558
OMA:VWQCDTP InterPro:IPR027145 InterPro:IPR007148 PANTHER:PTHR19858
Pfam:PF04003 OrthoDB:EOG4350F7 EMBL:X78964 PIR:S44226
RefSeq:NP_009984.1 ProteinModelPortal:P25635 SMR:P25635
DIP:DIP-1868N IntAct:P25635 MINT:MINT-392472 STRING:P25635
PaxDb:P25635 PeptideAtlas:P25635 EnsemblFungi:YCR057C GeneID:850422
KEGG:sce:YCR057C CYGD:YCR057c NextBio:965992 Genevestigator:P25635
GermOnline:YCR057C GO:GO:0034388 Uniprot:P25635
Length = 923
Score = 112 (44.5 bits), Expect = 0.00067, P = 0.00067
Identities = 46/171 (26%), Positives = 74/171 (43%)
Query: 16 TRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCL-QHEVACP 74
T++ ++ V V F P +LA G R+Y+ PD + Q + Q+ V
Sbjct: 251 TKKHFFYANQAKVKCVTFHPATR--LLAVGFTSGEFRLYDLPDFTLIQQLSMGQNPVNTV 308
Query: 75 TLASCLTW-NHSFSRFNSISI---MYEAHSINAE-HKDLIHDVAYDYYGLRMATCSSDQN 129
++ W S+ + + E++ + + H D + +AY G R+ T S D
Sbjct: 309 SVNQTGEWLAFGSSKLGQLLVYEWQSESYILKQQGHFDSTNSLAYSPDGSRVVTASEDGK 368
Query: 130 IKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
IKV G F + T FE+H +V V + G ++ SS DG VR W
Sbjct: 369 IKVWDITSG--FCLAT---FEEHTSSVTAVQFAKRGQVMFSSSLDGTVRAW 414
>RGD|1307285 [details] [associations]
symbol:Ciao1 "cytosolic iron-sulfur protein assembly 1"
species:10116 "Rattus norvegicus" [GO:0007059 "chromosome
segregation" evidence=IEA] [GO:0016226 "iron-sulfur cluster
assembly" evidence=ISO;ISS] [GO:0071817 "MMXD complex"
evidence=ISO;ISS] [GO:0097361 "CIA complex" evidence=ISO;ISS]
InterPro:IPR017986 InterPro:IPR001680 InterPro:IPR015943
Pfam:PF00400 PROSITE:PS50082 PROSITE:PS50294 SMART:SM00320
RGD:1307285 GO:GO:0007059 Gene3D:2.130.10.10 SUPFAM:SSF50978
PROSITE:PS00678 InterPro:IPR019775 eggNOG:COG2319 GO:GO:0016226
GO:GO:0071817 HSSP:P16649 HOGENOM:HOG000208901 OMA:SWKCVCT CTD:9391
GeneTree:ENSGT00700000104486 HOVERGEN:HBG056532 OrthoDB:EOG4MCX0N
GO:GO:0097361 EMBL:BC088474 IPI:IPI00194647 RefSeq:NP_001008766.1
UniGene:Rn.108832 ProteinModelPortal:Q5M7T1 STRING:Q5M7T1
PRIDE:Q5M7T1 Ensembl:ENSRNOT00000017603 GeneID:29231 KEGG:rno:29231
UCSC:RGD:1307285 InParanoid:Q5M7T1 NextBio:608478
Genevestigator:Q5M7T1 Uniprot:Q5M7T1
Length = 339
Score = 107 (42.7 bits), Expect = 0.00069, P = 0.00069
Identities = 41/184 (22%), Positives = 80/184 (43%)
Query: 19 SNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRI--------YEAPDVMNLSQWCLQHE 70
+ L V V + P G +LATC+ D V + YE V+N ++H
Sbjct: 99 TTLEGHENEVKSVAWAPS--GNLLATCSRDKSVWVWEVDEEDEYECVSVLNSHTQDVKHV 156
Query: 71 VACPT--LASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQ 128
V P+ L + +++ + + + + H+ + +A+D G R+A+CS D+
Sbjct: 157 VWHPSQELLASASYDDTVKLYQEEGDDWVCCATLEGHESTVWSIAFDPSGQRLASCSDDR 216
Query: 129 NIKVTRDVM-GTRFDIETIGNFEDHYC----------TVWRVSW-NITGTIVASSGDDGC 176
+++ R + G + G+ C T++ V+W +TG + + GDD
Sbjct: 217 TVRIWRQYLPGNEQGVACSGSDPSWKCVCTLSGFHTRTIYDVAWCQLTGALATACGDDA- 275
Query: 177 VRLW 180
+R++
Sbjct: 276 IRVF 279
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.133 0.434 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 197 181 0.00095 109 3 11 22 0.40 32
31 0.40 35
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 67
No. of states in DFA: 619 (66 KB)
Total size of DFA: 199 KB (2111 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 16.81u 0.07s 16.88t Elapsed: 00:00:31
Total cpu time: 16.82u 0.08s 16.90t Elapsed: 00:00:32
Start: Thu Aug 15 14:02:20 2013 End: Thu Aug 15 14:02:52 2013