RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13207
(197 letters)
>d1vyhc1 b.69.4.1 (C:92-408) Platelet-activating factor
acetylhydrolase IB subunit alpha {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 317
Score = 50.5 bits (119), Expect = 3e-08
Identities = 14/80 (17%), Positives = 33/80 (41%), Gaps = 11/80 (13%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIET---IGNFEDHYCTVWRVSW 161
H + + V + G + +C+ D+ ++V +D + + H V + +
Sbjct: 246 HDNWVRGVLFHSGGKFILSCADDKTLRV--------WDYKNKRCMKTLNAHEHFVTSLDF 297
Query: 162 NITGTIVASSGDDGCVRLWK 181
+ T V + D V++W+
Sbjct: 298 HKTAPYVVTGSVDQTVKVWE 317
Score = 42.8 bits (99), Expect = 1e-05
Identities = 31/169 (18%), Positives = 59/169 (34%), Gaps = 12/169 (7%)
Query: 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPD-----VMNLSQWCLQHEVACPTLASCLT 81
VT V F P V+ + + D +++++ + +Q + +
Sbjct: 19 PVTRVIFHPV--FSVMVSASEDATIKVWDYETGDFERTLKGHTDSVQDISFDHSGKLLAS 76
Query: 82 WNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRF 141
+ + +E H + V+ G + + S D+ IK+
Sbjct: 77 CSADMTIKLWDFQGFECIRTMHGHDHNVSSVSIMPNGDHIVSASRDKTIKMWE-----VQ 131
Query: 142 DIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190
+ F H V V N GT++AS +D VR+W + K K +
Sbjct: 132 TGYCVKTFTGHREWVRMVRPNQDGTLIASCSNDQTVRVWVVATKECKAE 180
Score = 35.9 bits (81), Expect = 0.002
Identities = 7/41 (17%), Positives = 20/41 (48%)
Query: 149 FEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKK 189
H V RV ++ +++ S+ +D +++W + ++
Sbjct: 13 LSGHRSPVTRVIFHPVFSVMVSASEDATIKVWDYETGDFER 53
Score = 29.3 bits (64), Expect = 0.28
Identities = 16/142 (11%), Positives = 38/142 (26%), Gaps = 15/142 (10%)
Query: 64 QWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMAT 123
+ P ++ + + H++ + V + G +A+
Sbjct: 101 DHNVSSVSIMPNGDHIVSASRDKTIKMWEVQTGYCVKTFTGHREWVRMVRPNQDGTLIAS 160
Query: 124 CSSDQNIKV---------------TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIV 168
CS+DQ ++V V + E+ + G +
Sbjct: 161 CSNDQTVRVWVVATKECKAELREHRHVVECISWAPESSYSSISEATGSETKKSGKPGPFL 220
Query: 169 ASSGDDGCVRLWKLKKKRKKKK 190
S D +++W +
Sbjct: 221 LSGSRDKTIKMWDVSTGMCLMT 242
Score = 28.9 bits (63), Expect = 0.33
Identities = 14/61 (22%), Positives = 24/61 (39%), Gaps = 11/61 (18%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIET---IGNFEDHYCTVWRVSW 161
H+ + V + M + S D IKV +D ET + H +V +S+
Sbjct: 16 HRSPVTRVIFHPVFSVMVSASEDATIKV--------WDYETGDFERTLKGHTDSVQDISF 67
Query: 162 N 162
+
Sbjct: 68 D 68
>d1erja_ b.69.4.1 (A:) Tup1, C-terminal domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 388
Score = 50.6 bits (119), Expect = 3e-08
Identities = 29/179 (16%), Positives = 54/179 (30%), Gaps = 44/179 (24%)
Query: 15 WTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACP 74
+ + + SV V F G + + + D V+++ + N S + C
Sbjct: 244 DSENESGTGHKDSVYSVVFTRD--GQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCE 301
Query: 75 TLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTR 134
HKD + VA + + S D+ +
Sbjct: 302 VTYIG-------------------------HKDFVLSVATTQNDEYILSGSKDRGVLF-- 334
Query: 135 DVMGTRFDIET---IGNFEDHYCTVWRV------SWNITGTIVASSGDDGCVRLWKLKK 184
+D ++ + + H +V V S + A+ D R+WK KK
Sbjct: 335 ------WDKKSGNPLLMLQGHRNSVISVAVANGSSLGPEYNVFATGSGDCKARIWKYKK 387
Score = 44.4 bits (103), Expect = 3e-06
Identities = 17/93 (18%), Positives = 30/93 (32%), Gaps = 7/93 (7%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKVT-------RDVMGTRFDIETIGNFEDHYCTVW 157
HKD ++ V + G + + S D+++K+ + T + H V
Sbjct: 253 HKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNKSDSKTPNSGTCEVTYIGHKDFVL 312
Query: 158 RVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190
V+ + S D V W K
Sbjct: 313 SVATTQNDEYILSGSKDRGVLFWDKKSGNPLLM 345
Score = 40.9 bits (94), Expect = 4e-05
Identities = 28/181 (15%), Positives = 50/181 (27%), Gaps = 5/181 (2%)
Query: 14 QWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC 73
+ S+ S + V F P L + E ++ + Q Q +
Sbjct: 110 ENLNTSSSPSSDLYIRSVCFSPDGKFLATGAEDRLIRIWDIENRKIVMILQGHEQDIYSL 169
Query: 74 PTLASCLTWNHSFSRFNSISI---MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNI 130
S + + + G +A S D+ +
Sbjct: 170 DYFPSGDKLVSGSGDRTVRIWDLRTGQCSLTLSIEDGVTTVAVSPGDGKYIAAGSLDRAV 229
Query: 131 KVTRDVMGTRFDI--ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKK 188
+V G + + H +V+ V + G V S D V+LW L+ K
Sbjct: 230 RVWDSETGFLVERLDSENESGTGHKDSVYSVVFTRDGQSVVSGSLDRSVKLWNLQNANNK 289
Query: 189 K 189
Sbjct: 290 S 290
Score = 28.2 bits (61), Expect = 0.68
Identities = 8/53 (15%), Positives = 22/53 (41%), Gaps = 2/53 (3%)
Query: 138 GTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190
D+E + + H V V ++ G +A+ G + +++++ +
Sbjct: 48 PREIDVELHKSLD-HTSVVCCVKFSNDGEYLAT-GCNKTTQVYRVSDGSLVAR 98
>d1tbga_ b.69.4.1 (A:) beta1-subunit of the signal-transducing G
protein heterotrimer {Cow (Bos taurus) [TaxId: 9913]}
Length = 340
Score = 48.2 bits (113), Expect = 2e-07
Identities = 15/86 (17%), Positives = 33/86 (38%), Gaps = 3/86 (3%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT 164
H+ I+ + + G AT S D ++ + ++ C + VS++ +
Sbjct: 225 HESDINAICFFPNGNAFATGSDDATCRLFDLRADQELMTY---SHDNIICGITSVSFSKS 281
Query: 165 GTIVASSGDDGCVRLWKLKKKRKKKK 190
G ++ + DD +W K +
Sbjct: 282 GRLLLAGYDDFNCNVWDALKADRAGV 307
Score = 46.3 bits (108), Expect = 6e-07
Identities = 17/108 (15%), Positives = 33/108 (30%), Gaps = 12/108 (11%)
Query: 76 LASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRD 135
A+ + + + F+ + + I V++ G + D N V
Sbjct: 241 FATG-SDDATCRLFDLRADQELMTYSHDNIICGITSVSFSKSGRLLLAGYDDFNCNV--- 296
Query: 136 VMGTRFDIET---IGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
+D G H V + G VA+ D +++W
Sbjct: 297 -----WDALKADRAGVLAGHDNRVSCLGVTDDGMAVATGSWDSFLKIW 339
Score = 30.9 bits (68), Expect = 0.093
Identities = 18/168 (10%), Positives = 50/168 (29%), Gaps = 7/168 (4%)
Query: 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHE----VACPTLASCLTW 82
+ + +G +L + + DG + I+++ + L+ A + +
Sbjct: 57 KIYAMHWGTD--SRLLVSASQDGKLIIWDSYTTNKVHAIPLRSSWVMTCAYAPSGNYVAC 114
Query: 83 NHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFD 142
+ + ++ ++ + H + T +
Sbjct: 115 GGLDNICSIYNLKTREGNVRVSRELAGHTGYLSCCRFLDDNQIVTSSGDTTCALWDIETG 174
Query: 143 IETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190
+T F H V +S + S D +LW +++ ++
Sbjct: 175 QQTT-TFTGHTGDVMSLSLAPDTRLFVSGACDASAKLWDVREGMCRQT 221
Score = 29.3 bits (64), Expect = 0.30
Identities = 9/51 (17%), Positives = 18/51 (35%)
Query: 140 RFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190
R + T H ++ + W ++ S+ DG + +W K
Sbjct: 42 RIQMRTRRTLRGHLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTTNKVHA 92
Score = 27.4 bits (59), Expect = 1.1
Identities = 12/79 (15%), Positives = 25/79 (31%), Gaps = 5/79 (6%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT 164
H I+ + + + + S D + + + V ++ +
Sbjct: 54 HLAKIYAMHWGTDSRLLVSASQDGKLIIWDSYTT-----NKVHAIPLRSSWVMTCAYAPS 108
Query: 165 GTIVASSGDDGCVRLWKLK 183
G VA G D ++ LK
Sbjct: 109 GNYVACGGLDNICSIYNLK 127
Score = 24.7 bits (52), Expect = 8.7
Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 2/43 (4%)
Query: 12 LNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIY 54
+ R L V+ + G+ +AT + D ++I+
Sbjct: 299 ALKADRAGVLAGHDNRVSCLGVTDD--GMAVATGSWDSFLKIW 339
>d1gxra_ b.69.4.1 (A:) Groucho/tle1, C-terminal domain {Human (Homo
sapiens) [TaxId: 9606]}
Length = 337
Score = 47.5 bits (111), Expect = 3e-07
Identities = 11/119 (9%), Positives = 29/119 (24%), Gaps = 6/119 (5%)
Query: 64 QWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMAT 123
+ L S + + H+ + + + Y G +
Sbjct: 223 FTSQIFSLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVS 282
Query: 124 CSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKL 182
D + R G I +V ++ + + D ++++
Sbjct: 283 TGKDNLLNAWRTPYGAS--IFQSK----ESSSVLSCDISVDDKYIVTGSGDKKATVYEV 335
Score = 35.2 bits (79), Expect = 0.004
Identities = 14/134 (10%), Positives = 39/134 (29%), Gaps = 3/134 (2%)
Query: 60 MNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGL 119
+Q ++ ASC+ ++ ++ + + S + + +
Sbjct: 169 DLHNQTLVRQFQGHTDGASCIDISNDGTKLWTGGLDNTVRSWDLREGRQLQQHDFTSQIF 228
Query: 120 RMATCSSDQ---NIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGC 176
+ C + + + +V + H V + + G S+G D
Sbjct: 229 SLGYCPTGEWLAVGMESSNVEVLHVNKPDKYQLHLHESCVLSLKFAYCGKWFVSTGKDNL 288
Query: 177 VRLWKLKKKRKKKK 190
+ W+ +
Sbjct: 289 LNAWRTPYGASIFQ 302
Score = 30.9 bits (68), Expect = 0.078
Identities = 8/77 (10%), Positives = 21/77 (27%), Gaps = 1/77 (1%)
Query: 104 EHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNI 163
H +++ V + T +KV + + + +
Sbjct: 49 NHGEVVCAVTISNPTRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNYIRSCKLLP 107
Query: 164 TGTIVASSGDDGCVRLW 180
G + G+ + +W
Sbjct: 108 DGCTLIVGGEASTLSIW 124
Score = 30.5 bits (67), Expect = 0.13
Identities = 10/40 (25%), Positives = 17/40 (42%), Gaps = 1/40 (2%)
Query: 151 DHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190
+H V V+ + V +G GCV++W + K
Sbjct: 49 NHGEVVCAVTISNPTRHVY-TGGKGCVKVWDISHPGNKSP 87
Score = 27.5 bits (59), Expect = 1.1
Identities = 11/146 (7%), Positives = 26/146 (17%), Gaps = 3/146 (2%)
Query: 17 RRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTL 76
R+ N ++ V V + T G V++++ N S +
Sbjct: 43 RQINTLNHGEVVCAVTISNP--TRHVYTGG-KGCVKVWDISHPGNKSPVSQLDCLNRDNY 99
Query: 77 ASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDV 136
+ + + KV
Sbjct: 100 IRSCKLLPDGCTLIVGGEASTLSIWDLAAPTPRIKAELTSSAPACYALAISPDSKVCFSC 159
Query: 137 MGTRFDIETIGNFEDHYCTVWRVSWN 162
+ + +
Sbjct: 160 CSDGNIAVWDLHNQTLVRQFQGHTDG 185
>d1k8kc_ b.69.4.1 (C:) Arp2/3 complex 41 kDa subunit ARPC1 {Cow (Bos
taurus) [TaxId: 9913]}
Length = 371
Score = 45.2 bits (105), Expect = 1e-06
Identities = 12/76 (15%), Positives = 30/76 (39%), Gaps = 3/76 (3%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT 164
+ I A++ ++A C ++ + + + G ++ + ++H V V W
Sbjct: 6 LVEPISCHAWNKDRTQIAICPNNHEVHI-YEKSGNKW--VQVHELKEHNGQVTGVDWAPD 62
Query: 165 GTIVASSGDDGCVRLW 180
+ + G D +W
Sbjct: 63 SNRIVTCGTDRNAYVW 78
Score = 32.5 bits (72), Expect = 0.029
Identities = 25/195 (12%), Positives = 48/195 (24%), Gaps = 26/195 (13%)
Query: 13 NQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVA 72
N+W + L + VT V + P + TC D ++ +
Sbjct: 39 NKWVQVHELKEHNGQVTGVDWAPD--SNRIVTCGTDRNAYVWTLKGRTWKPTLVILRINR 96
Query: 73 CPTLASCLTWNHSFS-----------RFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRM 121
F+ F + + I + + + + + +
Sbjct: 97 AARCVRWAPNEKKFAVGSGSRVISICYFEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLL 156
Query: 122 ATCSSDQNIKV-------------TRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIV 168
A S D ++ E + V V ++ G+ V
Sbjct: 157 AAGSCDFKCRIFSAYIKEVEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRV 216
Query: 169 ASSGDDGCVRLWKLK 183
A D V L
Sbjct: 217 AWVSHDSTVCLADAD 231
Score = 31.8 bits (70), Expect = 0.053
Identities = 5/35 (14%), Positives = 15/35 (42%)
Query: 156 VWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190
+ +WN T +A ++ V +++ + +
Sbjct: 10 ISCHAWNKDRTQIAICPNNHEVHIYEKSGNKWVQV 44
Score = 30.6 bits (67), Expect = 0.10
Identities = 15/175 (8%), Positives = 42/175 (24%), Gaps = 16/175 (9%)
Query: 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSF 86
++ + +A C + V IY + + + + W
Sbjct: 9 PISCHAWNKD--RTQIAICPNNHEVHIY---EKSGNKWVQVHELKEHNGQVTGVDWAPDS 63
Query: 87 SRFNSIS-----------IMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRD 135
+R + ++ + + S +
Sbjct: 64 NRIVTCGTDRNAYVWTLKGRTWKPTLVILRINRAARCVRWAPNEKKFAVGSGSRVISICY 123
Query: 136 VMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190
+ TV + W+ ++A+ D R++ K +++
Sbjct: 124 FEQENDWWVCKHIKKPIRSTVLSLDWHPNSVLLAAGSCDFKCRIFSAYIKEVEER 178
Score = 27.5 bits (59), Expect = 1.2
Identities = 7/36 (19%), Positives = 17/36 (47%), Gaps = 4/36 (11%)
Query: 152 HYCTVWRVSW----NITGTIVASSGDDGCVRLWKLK 183
H +V ++S + ++G DG + +W ++
Sbjct: 324 HKNSVSQISVLSGGKAKCSQFCTTGMDGGMSIWDVR 359
Score = 25.6 bits (54), Expect = 5.4
Identities = 14/101 (13%), Positives = 31/101 (30%), Gaps = 5/101 (4%)
Query: 80 LTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGT 139
+ + + + S E ++ +H V + G R+A S D + +
Sbjct: 175 VEERPAPTPWGSKMPFGELMFESSSSCGWVHGVCFSANGSRVAWVSHDSTVCLADADKKM 234
Query: 140 RFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
+ V++ ++VA+ D V
Sbjct: 235 AV-----ATLASETLPLLAVTFITESSLVAAGHDCFPVLFT 270
>d2ovrb2 b.69.4.1 (B:2365-2706) F-box/WD repeat-containing protein
7, FBXW7 {Human (Homo sapiens) [TaxId: 9606]}
Length = 342
Score = 41.3 bits (95), Expect = 3e-05
Identities = 19/154 (12%), Positives = 43/154 (27%), Gaps = 12/154 (7%)
Query: 39 GLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVAC------PTLASCLTWNHSFSRFNSI 92
G+ + + + D +R+++ + + L S S + I
Sbjct: 187 GIHVVSGSLDTSIRVWDVETGNCIHTLTGHQSLTSGMELKDNILVSG--NADSTVKIWDI 244
Query: 93 SIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDH 152
++ +K + + T S D +K+ G
Sbjct: 245 KTGQCLQTLQGPNKHQSAVTCLQFNKNFVITSSDDGTVKLWDLKTGEFIRNLVTLESGGS 304
Query: 153 YCTVWRVSWNITGTIVASSGDDGC----VRLWKL 182
VWR+ + T + A +G + +
Sbjct: 305 GGVVWRIRASNTKLVCAVGSRNGTEETKLLVLDF 338
Score = 29.0 bits (63), Expect = 0.39
Identities = 23/151 (15%), Positives = 48/151 (31%), Gaps = 7/151 (4%)
Query: 42 LATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISI--MYEAH 99
+ + A D +V++++ P+ H +L S S SI + + +
Sbjct: 150 VVSGAYDFMVKVWD-PETETCLHTLQGHTNRVYSLQFDGIHVVSGSLDTSIRVWDVETGN 208
Query: 100 SINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRV 159
I+ + + + ++D +K+ + +
Sbjct: 209 CIHTLTGHQSLTSGMELKDNILVSGNADSTVKI----WDIKTGQCLQTLQGPNKHQSAVT 264
Query: 160 SWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190
V +S DDG V+LW LK +
Sbjct: 265 CLQFNKNFVITSSDDGTVKLWDLKTGEFIRN 295
Score = 27.9 bits (60), Expect = 0.85
Identities = 14/119 (11%), Positives = 32/119 (26%), Gaps = 7/119 (5%)
Query: 65 WCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATC 124
V C + ++ + ++ + + G+ + +
Sbjct: 134 MGHVAAVRCVQYDGRRVVSGAYDFMVKVWDPETETCLHTLQGHTNRVYSLQFDGIHVVSG 193
Query: 125 SSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183
S D +I+V G + I+ S D V++W +K
Sbjct: 194 SLDTSIRVWDVETGNCI-------HTLTGHQSLTSGMELKDNILVSGNADSTVKIWDIK 245
Score = 26.7 bits (57), Expect = 1.8
Identities = 18/150 (12%), Positives = 41/150 (27%), Gaps = 8/150 (5%)
Query: 42 LATCAADGLVRIYEAPDVMNLSQW-CLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHS 100
+ + + D ++++ A L V + + + S R +
Sbjct: 30 IVSGSDDNTLKVWSAVTGKCLRTLVGHTGGVWSSQMRDNIIISGSTDRTLKVWNAETGEC 89
Query: 101 INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVS 160
I+ + + R+ + S D ++V G +
Sbjct: 90 IHTLYGHTSTVRCMHLHEKRVVSGSRDATLRVWDIETGQCLHVL-------MGHVAAVRC 142
Query: 161 WNITGTIVASSGDDGCVRLWKLKKKRKKKK 190
G V S D V++W + +
Sbjct: 143 VQYDGRRVVSGAYDFMVKVWDPETETCLHT 172
Score = 26.7 bits (57), Expect = 1.8
Identities = 5/30 (16%), Positives = 11/30 (36%)
Query: 160 SWNITGTIVASSGDDGCVRLWKLKKKRKKK 189
G + S DD +++W + +
Sbjct: 22 CLQFCGNRIVSGSDDNTLKVWSAVTGKCLR 51
>d1pgua2 b.69.4.1 (A:327-613) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 287
Score = 38.0 bits (86), Expect = 4e-04
Identities = 18/124 (14%), Positives = 34/124 (27%), Gaps = 5/124 (4%)
Query: 58 DVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYY 117
+ + + + + + +
Sbjct: 167 YISISPSETYIAAGDVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIE 226
Query: 118 GLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCV 177
+AT S D NI + + ++ I H V + W T+V SSG D C+
Sbjct: 227 EDLVATGSLDTNIFIYS----VKRPMKIIKALNAHKDGVNNLLWETPSTLV-SSGADACI 281
Query: 178 RLWK 181
+ W
Sbjct: 282 KRWN 285
Score = 26.8 bits (57), Expect = 1.9
Identities = 7/44 (15%), Positives = 14/44 (31%), Gaps = 4/44 (9%)
Query: 144 ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187
E + H + ++ N + S DG + W +
Sbjct: 4 EVLKTISGHNKGITALTVNP----LISGSYDGRIMEWSSSSMHQ 43
Score = 26.1 bits (55), Expect = 3.0
Identities = 15/129 (11%), Positives = 27/129 (20%)
Query: 59 VMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYG 118
+ Q+ VA S + + + Y G
Sbjct: 121 SPGSAVSLSQNYVAVGLEEGNTIQVFKLSDLEVSFDLKTPLRAKPSYISISPSETYIAAG 180
Query: 119 LRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVR 178
M F I I +VA+ D +
Sbjct: 181 DVMGKILLYDLQSREVKTSRWAFRTSKINAISWKPAEKGANEEEIEEDLVATGSLDTNIF 240
Query: 179 LWKLKKKRK 187
++ +K+ K
Sbjct: 241 IYSVKRPMK 249
>d1sq9a_ b.69.4.1 (A:) Antiviral protein Ski8 (Ski8p) {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 393
Score = 37.9 bits (86), Expect = 5e-04
Identities = 14/94 (14%), Positives = 33/94 (35%), Gaps = 10/94 (10%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKV-------TRDVMGTRFDIETIGNFEDHYCTVW 157
H I V+ +CS D +KV + + + H +
Sbjct: 13 HDADIFSVSAC--NSFTVSCSGDGYLKVWDNKLLDNENPKDKSYSHFVHKSGLHHVDVLQ 70
Query: 158 RVSWN-ITGTIVASSGDDGCVRLWKLKKKRKKKK 190
+ + +VA++ G + +++ ++ + KK
Sbjct: 71 AIERDAFELCLVATTSFSGDLLFYRITREDETKK 104
Score = 33.7 bits (75), Expect = 0.011
Identities = 32/185 (17%), Positives = 57/185 (30%), Gaps = 23/185 (12%)
Query: 6 LQSEKCLNQWTRRSNLVDSRTSVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQW 65
L L + + T V + L +AT +G V+I E + L +
Sbjct: 165 LNWSPTLELQGTVESPMTPSQFATSVDISERGL---IATGFNNGTVQISELSTLRPLYNF 221
Query: 66 CLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCS 125
QH + N + R S +I + Y+
Sbjct: 222 ESQH---------SMINNSNSIRSVKFSPQGSLLAIAHDSNSFGCITLYET--------- 263
Query: 126 SDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185
+ + + + H V +S+N +G + S+G DG +R W +K K
Sbjct: 264 --EFGERIGSLSVPTHSSQASLGEFAHSSWVMSLSFNDSGETLCSAGWDGKLRFWDVKTK 321
Query: 186 RKKKK 190
+
Sbjct: 322 ERITT 326
Score = 29.8 bits (65), Expect = 0.18
Identities = 18/175 (10%), Positives = 46/175 (26%), Gaps = 40/175 (22%)
Query: 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSF 86
+ V +C+ DG +++ W + +
Sbjct: 16 DIFSVSACNSFT----VSCSGDGYLKV-----------WDNKLLDNENPKDKSYSH---- 56
Query: 87 SRFNSISIMYEAHSINAEHKDLIHDVAYD-YYGLRMATCSSDQNIKV-----TRDVMGTR 140
H H D++ + D + +AT S ++ +
Sbjct: 57 ----------FVHKSGLHHVDVLQAIERDAFELCLVATTSFSGDLLFYRITREDETKKVI 106
Query: 141 FDIETIGNFEDHYCTVWRVSWNITG-----TIVASSGDDGCVRLWKLKKKRKKKK 190
F+ + + + + W + W + + ++ G +WK +
Sbjct: 107 FEKLDLLDSDMKKHSFWALKWGASNDRLLSHRLVATDVKGTTYIWKFHPFADESN 161
Score = 29.4 bits (64), Expect = 0.27
Identities = 10/51 (19%), Positives = 21/51 (41%), Gaps = 2/51 (3%)
Query: 143 IETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193
I T + H ++ VS + S DG +++W K + +++
Sbjct: 4 IATANAGKAHDADIFSVSA--CNSFTVSCSGDGYLKVWDNKLLDNENPKDK 52
>d1k32a3 b.69.9.1 (A:320-679) Tricorn protease domain 2 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 360
Score = 37.5 bits (85), Expect = 5e-04
Identities = 12/170 (7%), Positives = 33/170 (19%), Gaps = 28/170 (16%)
Query: 39 GLVLATCAADGLVRIYEA--PDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIM- 95
L + L + + P + +
Sbjct: 190 SKNLYYLSYRSLDPSPDRVVLNFSFEVVSKPFVIPLIPGSPNPTKLVPRSMTSEAGEYDL 249
Query: 96 ----------------YEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGT 139
Y + + + +
Sbjct: 250 NDMYKRSSPINVDPGDYRMIIPLESSILIYSVPVHGEFAAYYQGAPEKGVLLK------- 302
Query: 140 RFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKK 189
+D++T + + + + V DDG + + L+K ++
Sbjct: 303 -YDVKT-RKVTEVKNNLTDLRLSADRKTVMVRKDDGKIYTFPLEKPEDER 350
>d1pgua1 b.69.4.1 (A:2-326) Actin interacting protein 1 {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 325
Score = 37.2 bits (84), Expect = 8e-04
Identities = 17/120 (14%), Positives = 38/120 (31%), Gaps = 3/120 (2%)
Query: 64 QWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDV-AYDYYGLRMA 122
++ + + S F+ S + + + + + A
Sbjct: 208 VRDVEFSPDSGEFVITVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFALSWLDSQKFA 267
Query: 123 TCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKL 182
T +D I+V DV ++ + + + V G I+ S DG + ++L
Sbjct: 268 TVGADATIRVW-DVTTSKCVQKWTLDKQQLGNQQVGVVATGNGRII-SLSLDGTLNFYEL 325
Score = 34.5 bits (77), Expect = 0.005
Identities = 12/127 (9%), Positives = 30/127 (23%), Gaps = 1/127 (0%)
Query: 64 QWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMAT 123
C + + + + + + DV +
Sbjct: 163 NACHLKQSRPMRSMTVGDDGSVVFYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFVI 222
Query: 124 CSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183
D F + E ++ + + A+ G D +R+W +
Sbjct: 223 TVGSDRKISCFDGKSGEFLKYIEDDQEPVQGGIFAL-SWLDSQKFATVGADATIRVWDVT 281
Query: 184 KKRKKKK 190
+ +K
Sbjct: 282 TSKCVQK 288
Score = 29.9 bits (65), Expect = 0.18
Identities = 10/75 (13%), Positives = 20/75 (26%), Gaps = 1/75 (1%)
Query: 112 VAYDYYGLRMATCSSDQN-IKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVAS 170
++YD +A ++ D + T + S + S
Sbjct: 23 LSYDPTTNAIAYPCGKSAFVRCLDDGDSKVPPVVQFTGHGSSVVTTVKFSPIKGSQYLCS 82
Query: 171 SGDDGCVRLWKLKKK 185
+ G V +W
Sbjct: 83 GDESGKVIVWGWTFD 97
Score = 29.5 bits (64), Expect = 0.26
Identities = 19/156 (12%), Positives = 40/156 (25%), Gaps = 3/156 (1%)
Query: 28 VTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLA---SCLTWNH 84
VT VKF P + L + G V ++ + + + LA S ++W+
Sbjct: 66 VTTVKFSPIKGSQYLCSGDESGKVIVWGWTFDKESNSVEVNVKSEFQVLAGPISDISWDF 125
Query: 85 SFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIE 144
R + + + + R+ C Q+ + +G +
Sbjct: 126 EGRRLCVVGEGRDNFGVFISWDSGNSLGEVSGHSQRINACHLKQSRPMRSMTVGDDGSVV 185
Query: 145 TIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
+ R +
Sbjct: 186 FYQGPPFKFSASDRTHHKQGSFVRDVEFSPDSGEFV 221
>d1nr0a1 b.69.4.1 (A:2-312) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 311
Score = 36.8 bits (83), Expect = 0.001
Identities = 15/121 (12%), Positives = 39/121 (32%), Gaps = 4/121 (3%)
Query: 60 MNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGL 119
++ ++ + T ++ + + N H + + + G
Sbjct: 192 VHSVRYNPDGSLFASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGT 251
Query: 120 RMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRL 179
++A+ S+D+ IK+ + T +TI + W + S +G +
Sbjct: 252 KIASASADKTIKIWN--VATLKVEKTIPVGTRIEDQQLGIIWT--KQALVSISANGFINF 307
Query: 180 W 180
Sbjct: 308 V 308
Score = 29.5 bits (64), Expect = 0.22
Identities = 14/127 (11%), Positives = 40/127 (31%)
Query: 60 MNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGL 119
+ + + + P + +++ + F +++ D
Sbjct: 145 QARAMNSVDFKPSRPFRIISGSDDNTVAIFEGPPFKFKSTFGEHTKFVHSVRYNPDGSLF 204
Query: 120 RMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRL 179
+ D T + H +V+ ++W+ GT +AS+ D +++
Sbjct: 205 ASTGGDGTIVLYNGVDGTKTGVFEDDSLKNVAHSGSVFGLTWSPDGTKIASASADKTIKI 264
Query: 180 WKLKKKR 186
W + +
Sbjct: 265 WNVATLK 271
Score = 27.2 bits (58), Expect = 1.6
Identities = 10/59 (16%), Positives = 16/59 (27%)
Query: 104 EHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWN 162
EH G A+ N+++ T TI F + S +
Sbjct: 56 EHSHQTTVAKTSPSGYYCASGDVHGNVRIWDTTQTTHILKTTIPVFSGPVKDISWDSES 114
Score = 25.6 bits (54), Expect = 4.0
Identities = 8/32 (25%), Positives = 13/32 (40%)
Query: 149 FEDHYCTVWRVSWNITGTIVASSGDDGCVRLW 180
+ +H + +G AS G VR+W
Sbjct: 54 YTEHSHQTTVAKTSPSGYYCASGDVHGNVRIW 85
>d1p22a2 b.69.4.1 (A:253-545) F-box/WD-repeat protein 1 (beta-TRCP1)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 293
Score = 36.4 bits (82), Expect = 0.001
Identities = 17/142 (11%), Positives = 43/142 (30%), Gaps = 7/142 (4%)
Query: 44 TCAADGLVRIYEAPDVMNLSQWC-LQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSIN 102
+ + D ++++ + + +AC L + S + + +
Sbjct: 153 SASGDRTIKVWNTSTCEFVRTLNGHKRGIACLQYRDRLVVSGSSDNTIRLWDIECGACLR 212
Query: 103 AEHKDLIHDVAYDYYGLRMATCSSDQNIKV----TRDVMGTRFDIETIGNFEDHYCTVWR 158
+ R+ + + D IKV + +H V+R
Sbjct: 213 VLEGHEELVRCIRFDNKRIVSGAYDGKIKVWDLVAALDPRAPAGTLCLRTLVEHSGRVFR 272
Query: 159 VSWNITGTIVASSGDDGCVRLW 180
+ ++ + SS D + +W
Sbjct: 273 LQFD--EFQIVSSSHDDTILIW 292
Score = 33.3 bits (74), Expect = 0.014
Identities = 7/50 (14%), Positives = 19/50 (38%), Gaps = 2/50 (4%)
Query: 140 RFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKK 189
R ++ I + V+ + ++ + S D +++W K+
Sbjct: 2 RHSLQRIHCRSETSKGVYCLQYD--DQKIVSGLRDNTIKIWDKNTLECKR 49
Score = 26.0 bits (55), Expect = 3.5
Identities = 18/149 (12%), Positives = 40/149 (26%), Gaps = 5/149 (3%)
Query: 39 GLVLATCAADGLVRIYEAPDVMNLSQW-CLQHEVACPTLASCLTWNHSFSRFNSISIMYE 97
+ + D ++I++ + V C + S + +
Sbjct: 25 DQKIVSGLRDNTIKIWDKNTLECKRILTGHTGSVLCLQYDERVIITGSSDSTVRVWDVNT 84
Query: 98 AHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVW 157
+N + + M TCS D++I V T + + V
Sbjct: 85 GEMLNTLIHHCEAVLHLRFNNGMMVTCSKDRSIAVWDMASPTDITLRRVLVGHRAAVNVV 144
Query: 158 RVSWNITGTIVASSGDDGCVRLWKLKKKR 186
+ S+ D +++W
Sbjct: 145 DFDDK----YIVSASGDRTIKVWNTSTCE 169
>d1nr0a2 b.69.4.1 (A:313-611) Actin interacting protein 1 {Nematode
(Caenorhabditis elegans) [TaxId: 6239]}
Length = 299
Score = 35.3 bits (79), Expect = 0.003
Identities = 17/123 (13%), Positives = 37/123 (30%), Gaps = 3/123 (2%)
Query: 60 MNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGL 119
+ L + + + + H + V++ +
Sbjct: 178 HPAEITSVAFSNNGAFLVATDQSRKVIPYSVANNFELAHTNSWTFHTAKVACVSWSPDNV 237
Query: 120 RMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRL 179
R+AT S D ++ V + I G H + + T + S+G D ++
Sbjct: 238 RLATGSLDNSVIVWNMNKPSDHPIIIKG---AHAMSSVNSVIWLNETTIVSAGQDSNIKF 294
Query: 180 WKL 182
W +
Sbjct: 295 WNV 297
Score = 32.6 bits (72), Expect = 0.020
Identities = 6/38 (15%), Positives = 15/38 (39%)
Query: 152 HYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKK 189
H + +S + G + S+ +G + W + +
Sbjct: 11 HNKAITALSSSADGKTLFSADAEGHINSWDISTGISNR 48
Score = 27.6 bits (59), Expect = 0.85
Identities = 9/136 (6%), Positives = 37/136 (27%), Gaps = 2/136 (1%)
Query: 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSF 86
++T + G L + A+G + ++ ++ + H + + +
Sbjct: 14 AITALSSSAD--GKTLFSADAEGHINSWDISTGISNRVFPDVHATMITGIKTTSKGDLFT 71
Query: 87 SRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETI 146
++ + A + + + + D + + +
Sbjct: 72 VSWDDHLKVVPAGGSGVDSSKAVANKLSSQPLGLAVSADGDIAVAACYKHIAIYSHGKLT 131
Query: 147 GNFEDHYCTVWRVSWN 162
+ + +S +
Sbjct: 132 EVPISYNSSCVALSND 147
Score = 26.1 bits (55), Expect = 3.0
Identities = 10/83 (12%), Positives = 22/83 (26%), Gaps = 4/83 (4%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT 164
H I ++ G + + ++ +I G + H + +
Sbjct: 11 HNKAITALSSSADGKTLFSADAEGHINSWDISTGISNRVFPDV----HATMITGIKTTSK 66
Query: 165 GTIVASSGDDGCVRLWKLKKKRK 187
G + S DD +
Sbjct: 67 GDLFTVSWDDHLKVVPAGGSGVD 89
>d1yfqa_ b.69.4.2 (A:) Cell cycle arrest protein BUB3 {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 342
Score = 34.1 bits (76), Expect = 0.007
Identities = 4/36 (11%), Positives = 15/36 (41%)
Query: 155 TVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190
+ + + +++ + DG + ++K + K
Sbjct: 13 YISDIKIIPSKSLLLITSWDGSLTVYKFDIQAKNVD 48
Score = 31.7 bits (70), Expect = 0.042
Identities = 9/76 (11%), Positives = 23/76 (30%), Gaps = 2/76 (2%)
Query: 105 HKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNIT 164
KD I D+ + S D ++ V +++ + + + + ++
Sbjct: 10 PKDYISDIKIIPSKSLLLITSWDGSLTV-YKFDIQAKNVDLLQSLR-YKHPLLCCNFIDN 67
Query: 165 GTIVASSGDDGCVRLW 180
+ G L
Sbjct: 68 TDLQIYVGTVQGEILK 83
Score = 31.4 bits (69), Expect = 0.053
Identities = 18/175 (10%), Positives = 41/175 (23%), Gaps = 13/175 (7%)
Query: 27 SVTDVKFGPKQLGLVLATCAADGLVRIYEAPDVMNLSQ-----------WCLQHEVACPT 75
++D+K P +L + DG + +Y+ C
Sbjct: 13 YISDIKIIPS--KSLLLITSWDGSLTVYKFDIQAKNVDLLQSLRYKHPLLCCNFIDNTDL 70
Query: 76 LASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRD 135
T + + I N E I + +A +
Sbjct: 71 QIYVGTVQGEILKVDLIGSPSFQALTNNEANLGICRICKYGDDKLIAASWDGLIEVIDPR 130
Query: 136 VMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190
G N + + + + + ++ V+ ++L
Sbjct: 131 NYGDGVIAVKNLNSNNTKVKNKIFTMDTNSSRLIVGMNNSQVQWFRLPLCEDDNG 185
Score = 29.8 bits (65), Expect = 0.22
Identities = 8/46 (17%), Positives = 19/46 (41%)
Query: 145 TIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190
+ V + ++ + ++G DG + W L+ ++K K
Sbjct: 243 LNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISCWNLQTRKKIKN 288
Score = 29.4 bits (64), Expect = 0.23
Identities = 11/94 (11%), Positives = 28/94 (29%), Gaps = 12/94 (12%)
Query: 95 MYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIET---IGNFED 151
+ + + ++ + + + T SD I ++++T I NF
Sbjct: 240 CHRLNLKDTNLAYPVNSIEFSPRHKFLYTAGSDGIISC--------WNLQTRKKIKNFAK 291
Query: 152 HYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKK 185
V + I+ + D + +
Sbjct: 292 FN-EDSVVKIACSDNILCLATSDDTFKTNAAIDQ 324
>d1nexb2 b.69.4.1 (B:370-744) Cdc4 propeller domain {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 355
Score = 31.8 bits (70), Expect = 0.047
Identities = 17/146 (11%), Positives = 44/146 (30%), Gaps = 14/146 (9%)
Query: 42 LATCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNS-ISIMYEAHS 100
+ + D +RI++ + + + S + + + +
Sbjct: 216 CISASMDTTIRIWDLENGELMYTLQGHTALVGLLRLSDKFLVSAAADGSIRGWDANDYSR 275
Query: 101 INAEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIET----IGNFEDHYCTV 156
+ H + + Y + S+ + +++ + N +
Sbjct: 276 KFSYHHTNLSAITTFYVSDNILVSGSENQFNI--------YNLRSGKLVHANILKDADQI 327
Query: 157 WRVSWNITGTIVASSGDDGCVRLWKL 182
W V++ T+VA+ DG L L
Sbjct: 328 WSVNFK-GKTLVAAVEKDGQSFLEIL 352
Score = 26.4 bits (56), Expect = 2.4
Identities = 6/123 (4%), Positives = 28/123 (22%)
Query: 64 QWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMAT 123
+ + S + + ++ + + + +
Sbjct: 192 KCLYILSGHTDRIYSTIYDHERKRCISASMDTTIRIWDLENGELMYTLQGHTALVGLLRL 251
Query: 124 CSSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLK 183
+ + F H+ + ++ + SG + ++ L+
Sbjct: 252 SDKFLVSAAADGSIRGWDANDYSRKFSYHHTNLSAITTFYVSDNILVSGSENQFNIYNLR 311
Query: 184 KKR 186
+
Sbjct: 312 SGK 314
Score = 26.4 bits (56), Expect = 2.4
Identities = 12/69 (17%), Positives = 23/69 (33%), Gaps = 11/69 (15%)
Query: 115 DYYGLRMATCSSDQNIKVTRDVMGTRFDIET---IGNFEDHYCTVWRVSWNITGTIVASS 171
+ + T + D+ I+V +D + H VW + + G +V+ S
Sbjct: 20 QFEDNYVITGADDKMIRV--------YDSINKKFLLQLSGHDGGVWALKYAHGGILVSGS 71
Query: 172 GDDGCVRLW 180
D
Sbjct: 72 TDRTVRVWD 80
Score = 25.2 bits (53), Expect = 5.8
Identities = 5/31 (16%), Positives = 11/31 (35%)
Query: 160 SWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190
V + DD +R++ K+ +
Sbjct: 18 CLQFEDNYVITGADDKMIRVYDSINKKFLLQ 48
>d1jmxb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Pseudomonas putida [TaxId: 303]}
Length = 346
Score = 30.9 bits (68), Expect = 0.083
Identities = 9/79 (11%), Positives = 23/79 (29%), Gaps = 2/79 (2%)
Query: 114 YDYYGLRMATCSSDQNIKVTRDVMGTRFDIET--IGNFEDHYCTVWRVSWNITGTIVASS 171
D N ++D++ + + T + V+++ G +
Sbjct: 250 LTELYFTGLRSPKDPNQIYGVLNRLAKYDLKQRKLIKAANLDHTYYCVAFDKKGDKLYLG 309
Query: 172 GDDGCVRLWKLKKKRKKKK 190
G + ++ K K
Sbjct: 310 GTFNDLAVFNPDTLEKVKN 328
>d1pbyb_ b.69.2.2 (B:) Quinohemoprotein amine dehydrogenase B chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 337
Score = 30.2 bits (66), Expect = 0.15
Identities = 16/134 (11%), Positives = 42/134 (31%), Gaps = 3/134 (2%)
Query: 60 MNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIH-DVAYDYYG 118
++ QHE + T + + +++ E ++ +V
Sbjct: 183 PDVLAVWNQHESSGVMATPFYTARKDIDPADPTAYRTGLLTMDLETGEMAMREVRIMDVF 242
Query: 119 LRMATCSSDQNIKVTRDVMGTRFDIETIGNFE--DHYCTVWRVSWNITGTIVASSGDDGC 176
+ + + FD+E + + + + V+ + G+ V G G
Sbjct: 243 YFSTAVNPAKTRAFGAYNVLESFDLEKNASIKRVPLPHSYYSVNVSTDGSTVWLGGALGD 302
Query: 177 VRLWKLKKKRKKKK 190
+ + + KK +
Sbjct: 303 LAAYDAETLEKKGQ 316
>d1csna_ d.144.1.7 (A:) Casein kinase-1, CK1 {Fission yeast
(Schizosaccharomyces pombe) [TaxId: 4896]}
Length = 293
Score = 28.6 bits (63), Expect = 0.44
Identities = 10/62 (16%), Positives = 23/62 (37%), Gaps = 13/62 (20%)
Query: 135 DVMGTRFDI-ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEE 193
+V+G + + IG E + ++ + + VA K + +R +
Sbjct: 1 NVVGVHYKVGRRIG--EGSFGVIFEGTNLLNNQQVA----------IKFEPRRSDAPQLR 48
Query: 194 EE 195
+E
Sbjct: 49 DE 50
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+
modules {Escherichia coli [TaxId: 562]}
Length = 315
Score = 27.9 bits (61), Expect = 0.82
Identities = 16/79 (20%), Positives = 24/79 (30%), Gaps = 9/79 (11%)
Query: 83 NHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGL--------RMATCSSDQNIKVTR 134
RF+ S E H+++ V +D GL A D+ K
Sbjct: 77 GIELLRFDM-SEYMERHTVSRLIGAPPGYVGFDQGGLLTDAVIKHPHAVLLLDEIEKAHP 135
Query: 135 DVMGTRFDIETIGNFEDHY 153
DV + G D+
Sbjct: 136 DVFNILLQVMDNGTLTDNN 154
>d2bbkh_ b.69.2.1 (H:) Methylamine dehydrogenase, H-chain
{Paracoccus denitrificans [TaxId: 266]}
Length = 355
Score = 27.1 bits (58), Expect = 1.7
Identities = 7/94 (7%), Positives = 24/94 (25%), Gaps = 6/94 (6%)
Query: 103 AEHKDLIHDVAYDYYGLRMATCSSDQNIKVTRDVMGTRFDIETIGNFE----DHYCTVWR 158
VAY R+ ++ + ++ + +
Sbjct: 245 GWRPGGWQQVAYHRALDRIYLLVDQRDEWRHKTASRFVVVLDAKTGERLAKFEMGHEIDS 304
Query: 159 VSWNITGT--IVASSGDDGCVRLWKLKKKRKKKK 190
++ + + A S D + + + + +
Sbjct: 305 INVSQDEKPLLYALSTGDKTLYIHDAESGEELRS 338
>d1koaa2 d.144.1.7 (A:5915-6264) Twitchin, kinase domain
{Caenorhabditis elegans, pjk4 [TaxId: 6239]}
Length = 350
Score = 26.6 bits (58), Expect = 2.2
Identities = 15/70 (21%), Positives = 26/70 (37%), Gaps = 12/70 (17%)
Query: 128 QNIKVTRDVMGTRFDI-ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKR 186
Q +++ D + +DI E +G + V RV+ TG A +
Sbjct: 15 QPVEIKHDHVLDHYDIHEELG--TGAFGVVHRVTERATGNNFA---------AKFVMTPH 63
Query: 187 KKKKEEEEEE 196
+ KE +E
Sbjct: 64 ESDKETVRKE 73
>d2ozaa1 d.144.1.7 (A:51-385) MAP kinase activated protein kinase 2,
mapkap2 {Human (Homo sapiens) [TaxId: 9606]}
Length = 335
Score = 26.2 bits (57), Expect = 2.7
Identities = 9/66 (13%), Positives = 24/66 (36%), Gaps = 13/66 (19%)
Query: 130 IKVTRDVMGTRFDI--ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRK 187
+++ ++ + + + + +G V ++ T A L L+ K
Sbjct: 2 LQIKKNAIIDDYKVTSQVLG--LGINGKVLQIFNKRTQEKFA---------LKMLQDCPK 50
Query: 188 KKKEEE 193
++E E
Sbjct: 51 ARREVE 56
>d1usta_ a.4.5.13 (A:) Histone H1 homologue Hho1p {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 92
Score = 24.7 bits (54), Expect = 4.2
Identities = 10/28 (35%), Positives = 13/28 (46%)
Query: 165 GTIVASSGDDGCVRLWKLKKKRKKKKEE 192
G G G V+L K K KK++E
Sbjct: 63 GDFEQPKGPAGAVKLAKKKSPEVKKEKE 90
>d1pmea_ d.144.1.7 (A:) MAP kinase Erk2 {Human (Homo sapiens)
[TaxId: 9606]}
Length = 345
Score = 25.6 bits (55), Expect = 4.2
Identities = 13/66 (19%), Positives = 19/66 (28%), Gaps = 21/66 (31%)
Query: 138 GTRFDI-------ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKK 190
G FD+ IG E Y V N+ VA +KK +
Sbjct: 1 GQVFDVGPRYTNLSYIG--EGAYGMVCSAYDNVNKVRVA------------IKKISPFEH 46
Query: 191 EEEEEE 196
+ +
Sbjct: 47 QTYCQR 52
>d1q5ka_ d.144.1.7 (A:) Glycogen synthase kinase-3 beta (Gsk3b)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 350
Score = 25.5 bits (55), Expect = 4.9
Identities = 11/54 (20%), Positives = 21/54 (38%), Gaps = 14/54 (25%)
Query: 142 DIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEE 195
D + IG + V++ +G +VA +KK + K+ + E
Sbjct: 24 DTKVIG--NGSFGVVYQAKLCDSGELVA------------IKKVLQDKRFKNRE 63
>g1b35.1 b.121.4.1 (D:,C:) Insect picorna-like virus coat proteins
{Cricket paralysis virus [TaxId: 12136]}
Length = 339
Score = 25.4 bits (55), Expect = 5.1
Identities = 9/49 (18%), Positives = 17/49 (34%), Gaps = 3/49 (6%)
Query: 125 SSDQNIKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWN---ITGTIVAS 170
SS I+ + GT D+ + R +W + T++
Sbjct: 92 SSTNEIETNEGLAGTSLDVMDLSRVLSIPNYWDRFTWKTSDVINTVLWD 140
>d2avda1 c.66.1.1 (A:44-262) COMT domain-containing protein 1,
COMTD1 {Human (Homo sapiens) [TaxId: 9606]}
Length = 219
Score = 25.2 bits (54), Expect = 5.6
Identities = 7/103 (6%), Positives = 26/103 (25%), Gaps = 3/103 (2%)
Query: 70 EVACPTLASCLTWNHSFSRFNSISIMYEAHSINAEHKDLIHDVAYDYYGLRMATCSSDQN 129
++ T S L + + + L ++ + +
Sbjct: 65 DLGTFTGYSALALALALPADGRVVTCEVDAQPPELGRPLWRQAEAEHKIDLRLKPALETL 124
Query: 130 IKVTRDVMGTRFDIETIGNFEDHYCTVWRVSWNI---TGTIVA 169
++ FD+ + +++ + + G +
Sbjct: 125 DELLAAGEAGTFDVAVVDADKENCSAYYERCLQLLRPGGILAV 167
>d1nvra_ d.144.1.7 (A:) Cell cycle checkpoint kinase chk1 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 271
Score = 25.4 bits (55), Expect = 5.8
Identities = 11/54 (20%), Positives = 18/54 (33%), Gaps = 14/54 (25%)
Query: 143 IETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEEE 196
++T+G E Y V +T VA +K K+ + E
Sbjct: 10 VQTLG--EGAYGEVQLAVNRVTEEAVA------------VKIVDMKRAVDCPEN 49
>d1s9ja_ d.144.1.7 (A:) Dual specificity mitogen-activated protein
kinase kinase 1, Mek1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 322
Score = 25.0 bits (54), Expect = 6.1
Identities = 9/54 (16%), Positives = 18/54 (33%), Gaps = 14/54 (25%)
Query: 143 IETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEEE 196
I +G + V++VS +G ++A K + K +
Sbjct: 11 ISELG--AGNGGVVFKVSHKPSGLVMA------------RKLIHLEIKPAIRNQ 50
>d1edqa2 c.1.8.5 (A:133-443,A:517-563) Chitinase A, catalytic domain
{Serratia marcescens [TaxId: 615]}
Length = 358
Score = 25.1 bits (54), Expect = 6.7
Identities = 12/75 (16%), Positives = 21/75 (28%)
Query: 44 TCAADGLVRIYEAPDVMNLSQWCLQHEVACPTLASCLTWNHSFSRFNSISIMYEAHSINA 103
A L + + L + S I A+++
Sbjct: 188 KGANPNLGSPQDGETYVLLMKELRAMLDQLSVETGRKYELTSAISAGKDKIDKVAYNVAQ 247
Query: 104 EHKDLIHDVAYDYYG 118
D I ++YD+YG
Sbjct: 248 NSMDHIFLMSYDFYG 262
>d1gz8a_ d.144.1.7 (A:) Cyclin-dependent PK, CDK2 {Human (Homo
sapiens) [TaxId: 9606]}
Length = 298
Score = 24.8 bits (53), Expect = 6.9
Identities = 15/55 (27%), Positives = 21/55 (38%), Gaps = 14/55 (25%)
Query: 143 IETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEEEN 197
+E IG E Y V++ +TG +VA LKK R + E
Sbjct: 7 VEKIG--EGTYGVVYKARNKLTGEVVA------------LKKIRLDTETEGVPST 47
>d2jfla1 d.144.1.7 (A:21-308) STE20-like serine/threonine-protein
kinase, SLK {Human (Homo sapiens) [TaxId: 9606]}
Length = 288
Score = 24.9 bits (54), Expect = 7.2
Identities = 8/54 (14%), Positives = 19/54 (35%), Gaps = 11/54 (20%)
Query: 143 IETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEEE 196
I +G + + V++ T + A + K +++ E+ E
Sbjct: 17 IGELG--DGAFGKVYKAQNKETSVLAA---------AKVIDTKSEEELEDYMVE 59
>d1yhwa1 d.144.1.7 (A:249-541) pak1 {Human (Homo sapiens) [TaxId:
9606]}
Length = 293
Score = 24.6 bits (53), Expect = 8.2
Identities = 13/54 (24%), Positives = 21/54 (38%), Gaps = 11/54 (20%)
Query: 143 IETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEEE 196
E IG + TV+ TG VA + ++ +++ KKE E
Sbjct: 25 FEKIG--QGASGTVYTAMDVATGQEVA---------IRQMNLQQQPKKELIINE 67
>d1djqa2 c.3.1.1 (A:490-645) Trimethylamine dehydrogenase,
C-terminal domain {Methylophilus methylotrophus, w3a1
[TaxId: 17]}
Length = 156
Score = 24.5 bits (52), Expect = 8.5
Identities = 5/56 (8%), Positives = 13/56 (23%), Gaps = 4/56 (7%)
Query: 104 EHKDLIHDVAYDYYGLRMATCSSDQNIKVT----RDVMGTRFDIETIGNFEDHYCT 155
+ +I + + +A + +VT + N
Sbjct: 39 GKRVVILNADTYFMAPSLAEKLATAGHEVTIVSGVHLANYMHFTLEYPNMMRRLHE 94
>d1u5ra_ d.144.1.7 (A:) Serine/threonine protein kinase TAO2 {Rat
(Rattus norvegicus) [TaxId: 10116]}
Length = 309
Score = 24.6 bits (53), Expect = 9.0
Identities = 9/54 (16%), Positives = 19/54 (35%), Gaps = 11/54 (20%)
Query: 142 DIETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEE 195
D+ IG + V+ +VA + K+ K+ E+ ++
Sbjct: 19 DLREIG--HGSFGAVYFARDVRNSEVVA---------IKKMSYSGKQSNEKWQD 61
>d1ckia_ d.144.1.7 (A:) Casein kinase-1, CK1 {Rat (Rattus
norvegicus) [TaxId: 10116]}
Length = 299
Score = 24.4 bits (52), Expect = 9.8
Identities = 11/61 (18%), Positives = 20/61 (32%), Gaps = 13/61 (21%)
Query: 138 GTRFDI-ETIGNFEDHYCTVWRVSWNITGTIVASSGDDGCVRLWKLKKKRKKKKEEEEEE 196
G R+ + IG + ++ + G VA KL+ + K + E
Sbjct: 6 GNRYRLGRKIG--SGSFGDIYLGTDIAAGEEVA----------IKLECVKTKHPQLHIES 53
Query: 197 N 197
Sbjct: 54 K 54
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.319 0.132 0.416
Gapped
Lambda K H
0.267 0.0556 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 759,875
Number of extensions: 33535
Number of successful extensions: 301
Number of sequences better than 10.0: 1
Number of HSP's gapped: 248
Number of HSP's successfully gapped: 120
Length of query: 197
Length of database: 2,407,596
Length adjustment: 81
Effective length of query: 116
Effective length of database: 1,295,466
Effective search space: 150274056
Effective search space used: 150274056
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 50 (23.4 bits)