Your job contains 1 sequence.
>psy13208
MTFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCL
NMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKDGKSM
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13208
(120 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0034012 - symbol:Hr51 "Hormone receptor 51" specie... 192 3.2e-14 1
WB|WBGene00001400 - symbol:fax-1 species:6239 "Caenorhabd... 187 5.6e-14 1
ZFIN|ZDB-GENE-041114-63 - symbol:nr2e3 "nuclear receptor ... 173 2.0e-12 1
UNIPROTKB|F1P0M4 - symbol:NR2E3 "Uncharacterized protein"... 172 2.2e-12 1
ZFIN|ZDB-GENE-040801-127 - symbol:nr2e1 "nuclear receptor... 163 2.1e-11 1
MGI|MGI:1346317 - symbol:Nr2e3 "nuclear receptor subfamil... 160 4.4e-11 1
UNIPROTKB|Q9Y5X4 - symbol:NR2E3 "Photoreceptor-specific n... 160 4.7e-11 1
UNIPROTKB|F1ML62 - symbol:NR2E3 "Photoreceptor-specific n... 160 4.8e-11 1
UNIPROTKB|Q9TTF0 - symbol:NR2E3 "Photoreceptor-specific n... 160 4.8e-11 1
UNIPROTKB|F1SIS0 - symbol:F1SIS0 "Uncharacterized protein... 159 6.4e-11 1
UNIPROTKB|Q91379 - symbol:NR2E1 "Nuclear receptor subfami... 158 6.8e-11 1
UNIPROTKB|F1MN68 - symbol:NR2E1 "Uncharacterized protein"... 158 6.8e-11 1
UNIPROTKB|F1PD89 - symbol:NR2E1 "Uncharacterized protein"... 158 6.8e-11 1
UNIPROTKB|Q9Y466 - symbol:NR2E1 "Nuclear receptor subfami... 158 6.8e-11 1
UNIPROTKB|I3LU21 - symbol:NR2E1 "Uncharacterized protein"... 158 6.8e-11 1
MGI|MGI:1100526 - symbol:Nr2e1 "nuclear receptor subfamil... 158 6.8e-11 1
UNIPROTKB|F1Q176 - symbol:NR2E1 "Uncharacterized protein"... 158 7.9e-11 1
UNIPROTKB|F1RT26 - symbol:NR2E1 "Uncharacterized protein"... 158 8.2e-11 1
UNIPROTKB|Q6ZMP8 - symbol:NR2E1 "Nuclear receptor subfami... 158 8.3e-11 1
FB|FBgn0015381 - symbol:dsf "dissatisfaction" species:722... 154 5.1e-10 1
FB|FBgn0003720 - symbol:tll "tailless" species:7227 "Dros... 148 1.2e-09 1
WB|WBGene00003657 - symbol:nhr-67 species:6239 "Caenorhab... 144 2.7e-09 1
UNIPROTKB|Q9XVV3 - symbol:nhr-67 "Nuclear hormone recepto... 144 2.7e-09 1
WB|WBGene00003701 - symbol:nhr-111 species:6239 "Caenorha... 137 8.4e-09 1
UNIPROTKB|O45521 - symbol:nhr-111 "Nuclear hormone recept... 137 8.4e-09 1
ZFIN|ZDB-GENE-990415-268 - symbol:thrb "thyroid hormone r... 121 6.4e-08 2
WB|WBGene00021417 - symbol:nhr-236 species:6239 "Caenorha... 128 6.6e-08 1
FB|FBgn0003651 - symbol:svp "seven up" species:7227 "Dros... 134 7.9e-08 1
UNIPROTKB|F1M5T7 - symbol:Hnf4a "Hepatocyte nuclear facto... 122 8.7e-08 1
ZFIN|ZDB-GENE-041210-198 - symbol:nr2c1 "nuclear receptor... 132 9.6e-08 1
UNIPROTKB|E2QW41 - symbol:NR2F2 "Uncharacterized protein"... 129 1.0e-07 1
UNIPROTKB|Q90733 - symbol:NR2F2 "COUP transcription facto... 129 1.1e-07 1
WB|WBGene00015497 - symbol:nhr-76 species:6239 "Caenorhab... 130 1.1e-07 1
UNIPROTKB|Q65CM0 - symbol:nhr-76 "Protein NHR-76" species... 130 1.1e-07 1
UNIPROTKB|Q9TTR7 - symbol:NR2F2 "COUP transcription facto... 129 1.1e-07 1
UNIPROTKB|P24468 - symbol:NR2F2 "COUP transcription facto... 129 1.1e-07 1
UNIPROTKB|F1SCJ6 - symbol:NR2F2 "Uncharacterized protein"... 129 1.1e-07 1
MGI|MGI:1352452 - symbol:Nr2f2 "nuclear receptor subfamil... 129 1.1e-07 1
RGD|69305 - symbol:Nr2f2 "nuclear receptor subfamily 2, g... 129 1.1e-07 1
UNIPROTKB|O09018 - symbol:Nr2f2 "COUP transcription facto... 129 1.1e-07 1
ZFIN|ZDB-GENE-040426-1438 - symbol:nr2f1b "nuclear recept... 128 1.3e-07 1
UNIPROTKB|F1N056 - symbol:NR2F1 "COUP transcription facto... 127 1.4e-07 1
WB|WBGene00003603 - symbol:nhr-4 species:6239 "Caenorhabd... 116 1.5e-07 2
ZFIN|ZDB-GENE-990415-253 - symbol:nr2f5 "nuclear receptor... 127 1.8e-07 1
ZFIN|ZDB-GENE-980526-115 - symbol:nr2f1a "nuclear recepto... 127 1.8e-07 1
UNIPROTKB|F1P101 - symbol:F1P101 "Uncharacterized protein... 107 1.8e-07 2
UNIPROTKB|F2Z3S9 - symbol:Nr2f1 "Protein Nr2f1" species:1... 127 1.9e-07 1
UNIPROTKB|F1RNX7 - symbol:NR2F1 "Uncharacterized protein"... 127 1.9e-07 1
MGI|MGI:1352451 - symbol:Nr2f1 "nuclear receptor subfamil... 127 1.9e-07 1
UNIPROTKB|P10589 - symbol:NR2F1 "COUP transcription facto... 127 1.9e-07 1
UNIPROTKB|Q9TTR8 - symbol:NR2F1 "COUP transcription facto... 127 1.9e-07 1
WB|WBGene00018430 - symbol:nhr-142 species:6239 "Caenorha... 108 2.1e-07 2
UNIPROTKB|F1P0B9 - symbol:F1P0B9 "Uncharacterized protein... 127 2.1e-07 1
MGI|MGI:1352466 - symbol:Nr2c2 "nuclear receptor subfamil... 127 3.3e-07 1
RGD|3201 - symbol:Nr2c2 "nuclear receptor subfamily 2, gr... 127 3.3e-07 1
UNIPROTKB|G3V7F5 - symbol:Nr2c2 "RCG56527, isoform CRA_c"... 127 3.3e-07 1
UNIPROTKB|F1SPJ9 - symbol:NR2C2 "Uncharacterized protein"... 127 3.3e-07 1
UNIPROTKB|P49116 - symbol:NR2C2 "Nuclear receptor subfami... 127 3.3e-07 1
UNIPROTKB|F1P0D1 - symbol:F1P0D1 "Uncharacterized protein... 127 3.3e-07 1
WB|WBGene00003622 - symbol:nhr-23 species:6239 "Caenorhab... 112 3.3e-07 2
UNIPROTKB|E1B9Y6 - symbol:NR2C2 "Uncharacterized protein"... 127 3.4e-07 1
UNIPROTKB|E2RI85 - symbol:NR2C2 "Uncharacterized protein"... 127 3.5e-07 1
UNIPROTKB|F1PX81 - symbol:NR2F2 "Uncharacterized protein"... 124 4.0e-07 1
ZFIN|ZDB-GENE-990415-252 - symbol:nr2f2 "nuclear receptor... 124 4.2e-07 1
UNIPROTKB|E9PSV4 - symbol:Hnf4a "Hepatocyte nuclear facto... 122 4.8e-07 1
MGI|MGI:1352453 - symbol:Nr2f6 "nuclear receptor subfamil... 122 5.8e-07 1
RGD|621682 - symbol:Nr2f1 "nuclear receptor subfamily 2, ... 114 6.1e-07 1
UNIPROTKB|F1NW94 - symbol:NR2C1 "Uncharacterized protein"... 124 6.3e-07 1
WB|WBGene00006790 - symbol:unc-55 species:6239 "Caenorhab... 121 6.8e-07 1
UNIPROTKB|E2QSI1 - symbol:ESR1 "Uncharacterized protein" ... 108 6.9e-07 2
MGI|MGI:1352467 - symbol:Esr1 "estrogen receptor 1 (alpha... 108 7.1e-07 2
RGD|2581 - symbol:Esr1 "estrogen receptor 1" species:1011... 108 7.2e-07 2
RGD|621685 - symbol:Nr2f6 "nuclear receptor subfamily 2, ... 121 7.5e-07 1
UNIPROTKB|O09017 - symbol:Nr2f6 "Nuclear receptor subfami... 121 7.5e-07 1
UNIPROTKB|E1BZA2 - symbol:NR2C1 "Uncharacterized protein"... 124 7.5e-07 1
UNIPROTKB|Q7YRQ5 - symbol:HNF4A "Uncharacterized protein"... 122 7.5e-07 1
UNIPROTKB|P10588 - symbol:NR2F6 "Nuclear receptor subfami... 121 8.0e-07 1
UNIPROTKB|E2R9S0 - symbol:HNF4A "Uncharacterized protein"... 122 8.0e-07 1
UNIPROTKB|P41235 - symbol:HNF4A "Hepatocyte nuclear facto... 122 8.0e-07 1
UNIPROTKB|Q1I181 - symbol:HNF4A "Uncharacterized protein"... 122 8.0e-07 1
MGI|MGI:109128 - symbol:Hnf4a "hepatic nuclear factor 4, ... 122 8.0e-07 1
RGD|2810 - symbol:Hnf4a "hepatocyte nuclear factor 4, alp... 122 8.0e-07 1
UNIPROTKB|G3V750 - symbol:Hnf4a "Hepatocyte nuclear facto... 122 8.0e-07 1
UNIPROTKB|F1N3S3 - symbol:NR2F6 "Uncharacterized protein"... 121 8.2e-07 1
UNIPROTKB|F1S962 - symbol:NR2F6 "Uncharacterized protein"... 121 8.3e-07 1
UNIPROTKB|E2R3D0 - symbol:NR2F6 "Uncharacterized protein"... 121 8.4e-07 1
UNIPROTKB|E5L8C9 - symbol:ESR1 "Estrogen receptor alpha" ... 108 8.6e-07 2
UNIPROTKB|P06212 - symbol:ESR1 "Estrogen receptor" specie... 108 8.6e-07 2
UNIPROTKB|C9JKS0 - symbol:NR2C2 "Nuclear receptor subfami... 114 9.2e-07 1
ZFIN|ZDB-GENE-030131-1077 - symbol:hnf4a "hepatocyte nucl... 121 9.9e-07 1
ZFIN|ZDB-GENE-030131-4362 - symbol:nr2f6a "nuclear recept... 120 1.0e-06 1
ZFIN|ZDB-GENE-040426-2351 - symbol:nr2f6b "nuclear recept... 120 1.0e-06 1
FB|FBgn0037436 - symbol:Hr83 "Hormone receptor 83" specie... 117 1.1e-06 1
UNIPROTKB|F6V0I8 - symbol:ESR1 "Uncharacterized protein" ... 108 1.1e-06 2
FB|FBgn0001320 - symbol:kni "knirps" species:7227 "Drosop... 120 1.1e-06 1
UNIPROTKB|F1NZ15 - symbol:HNF4A "Uncharacterized protein"... 120 1.2e-06 1
UNIPROTKB|F1N2D7 - symbol:HNF4G "Uncharacterized protein"... 119 1.3e-06 1
UNIPROTKB|Q14541 - symbol:HNF4G "Hepatocyte nuclear facto... 119 1.3e-06 1
MGI|MGI:1353604 - symbol:Hnf4g "hepatocyte nuclear factor... 119 1.3e-06 1
UNIPROTKB|F1MGG2 - symbol:HNF4G "Uncharacterized protein"... 119 1.4e-06 1
WARNING: Descriptions of 443 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0034012 [details] [associations]
symbol:Hr51 "Hormone receptor 51" species:7227 "Drosophila
melanogaster" [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISS;NAS] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0003707 "steroid
hormone receptor activity" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0020037 "heme binding" evidence=IDA]
[GO:0048526 "imaginal disc-derived wing expansion" evidence=IMP]
[GO:0016319 "mushroom body development" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0031103 "axon regeneration"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
EMBL:AE013599 GO:GO:0005634 GO:GO:0022008 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0020037 GO:GO:0016319 GO:GO:0048526
eggNOG:NOG277339 KO:K08546 OMA:MLSQHTK EMBL:BT122090
RefSeq:NP_611032.2 UniGene:Dm.16048 SMR:A1ZA01 STRING:A1ZA01
EnsemblMetazoa:FBtr0114456 GeneID:36702 KEGG:dme:Dmel_CG16801
CTD:36702 FlyBase:FBgn0034012 InParanoid:A1ZA01 OrthoDB:EOG4NCJVD
GenomeRNAi:36702 NextBio:799957 Uniprot:A1ZA01
Length = 582
Score = 192 (72.6 bits), Expect = 3.2e-14, P = 3.2e-14
Identities = 38/68 (55%), Positives = 44/68 (64%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
+H G+ C +R + R CQAGTGRC+VDKAHRNQCQACRLKKCL MG
Sbjct: 121 KHYGILACNGCSGFFKRSV----RRKLIYRCQAGTGRCVVDKAHRNQCQACRLKKCLQMG 176
Query: 64 MNKDDAQH 71
MNKD Q+
Sbjct: 177 MNKDAVQN 184
Score = 152 (58.6 bits), Expect = 6.5e-10, P = 6.5e-10
Identities = 26/28 (92%), Positives = 27/28 (96%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
RC+VDKAHRNQCQACRLKKCL MGMNKD
Sbjct: 153 RCVVDKAHRNQCQACRLKKCLQMGMNKD 180
>WB|WBGene00001400 [details] [associations]
symbol:fax-1 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043059
"regulation of forward locomotion" evidence=IMP] [GO:0043058
"regulation of backward locomotion" evidence=IMP] [GO:0007626
"locomotory behavior" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA;IMP] [GO:0048665 "neuron fate specification"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0007626 GO:GO:0003700 GO:GO:0006351
GO:GO:0048665 GO:GO:0043058 GeneTree:ENSGT00700000104390
HSSP:P19793 KO:K07295 GO:GO:0043059 EMBL:AF176087 EMBL:FO080551
RefSeq:NP_508547.1 UniGene:Cel.19526 ProteinModelPortal:G5EDJ0
SMR:G5EDJ0 EnsemblMetazoa:F56E3.4 GeneID:180609
KEGG:cel:CELE_F56E3.4 CTD:180609 WormBase:F56E3.4a OMA:FREYAGA
NextBio:910094 Uniprot:G5EDJ0
Length = 419
Score = 187 (70.9 bits), Expect = 5.6e-14, P = 5.6e-14
Identities = 37/68 (54%), Positives = 43/68 (63%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
+H G+ C +R + R CQAGTG C+VDKAHRNQCQACRLKKCLN G
Sbjct: 112 KHYGILACNGCSGFFKRSV----RRRLIYRCQAGTGNCVVDKAHRNQCQACRLKKCLNKG 167
Query: 64 MNKDDAQH 71
MNKD Q+
Sbjct: 168 MNKDAVQN 175
Score = 147 (56.8 bits), Expect = 1.3e-09, P = 1.3e-09
Identities = 25/27 (92%), Positives = 26/27 (96%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C+VDKAHRNQCQACRLKKCLN GMNKD
Sbjct: 145 CVVDKAHRNQCQACRLKKCLNKGMNKD 171
>ZFIN|ZDB-GENE-041114-63 [details] [associations]
symbol:nr2e3 "nuclear receptor subfamily 2, group E,
member 3" species:7955 "Danio rerio" [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-041114-63 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AL929050
IPI:IPI00511770 ProteinModelPortal:F1QGF3
Ensembl:ENSDART00000127099 ArrayExpress:F1QGF3 Bgee:F1QGF3
Uniprot:F1QGF3
Length = 426
Score = 173 (66.0 bits), Expect = 2.0e-12, P = 2.0e-12
Identities = 31/38 (81%), Positives = 32/38 (84%)
Query: 34 CQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQH 71
CQAGTG C VDKAHRNQCQACRLKKCL GMNKD Q+
Sbjct: 82 CQAGTGMCPVDKAHRNQCQACRLKKCLQAGMNKDAVQN 119
Score = 135 (52.6 bits), Expect = 2.7e-08, P = 2.7e-08
Identities = 24/27 (88%), Positives = 24/27 (88%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C VDKAHRNQCQACRLKKCL GMNKD
Sbjct: 89 CPVDKAHRNQCQACRLKKCLQAGMNKD 115
>UNIPROTKB|F1P0M4 [details] [associations]
symbol:NR2E3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0005667 "transcription
factor complex" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0042462 "eye photoreceptor
cell development" evidence=IEA] [GO:0045872 "positive regulation of
rhodopsin gene expression" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0008285 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0005667 GO:GO:0000122
GO:GO:0030522 OMA:MLSQHTK EMBL:AADN02051066 IPI:IPI00600137
Ensembl:ENSGALT00000003264 Uniprot:F1P0M4
Length = 405
Score = 172 (65.6 bits), Expect = 2.2e-12, P = 2.2e-12
Identities = 31/38 (81%), Positives = 32/38 (84%)
Query: 34 CQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQH 71
CQAGTG C VDKAHRNQCQACRLKKCL GMNKD Q+
Sbjct: 71 CQAGTGLCPVDKAHRNQCQACRLKKCLQAGMNKDAVQN 108
Score = 135 (52.6 bits), Expect = 2.4e-08, P = 2.4e-08
Identities = 24/27 (88%), Positives = 24/27 (88%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C VDKAHRNQCQACRLKKCL GMNKD
Sbjct: 78 CPVDKAHRNQCQACRLKKCLQAGMNKD 104
Score = 102 (41.0 bits), Expect = 9.1e-05, P = 9.1e-05
Identities = 18/22 (81%), Positives = 19/22 (86%)
Query: 14 CQAGTERCIVDKAHRNQCQACQ 35
CQAGT C VDKAHRNQCQAC+
Sbjct: 71 CQAGTGLCPVDKAHRNQCQACR 92
>ZFIN|ZDB-GENE-040801-127 [details] [associations]
symbol:nr2e1 "nuclear receptor subfamily 2, group
E, member 1" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-040801-127 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000260820
HOVERGEN:HBG005606 GeneTree:ENSGT00700000104390 eggNOG:NOG277339
KO:K08545 CTD:7101 OrthoDB:EOG4ZCT4Q OMA:ILLEDAW EMBL:CU138515
EMBL:BC077146 EMBL:EF010862 IPI:IPI00504614 RefSeq:NP_001003608.1
UniGene:Dr.78647 STRING:Q6DEH0 Ensembl:ENSDART00000026635
GeneID:445214 KEGG:dre:445214 NextBio:20831976 Uniprot:Q6DEH0
Length = 396
Score = 163 (62.4 bits), Expect = 2.1e-11, P = 2.1e-11
Identities = 34/69 (49%), Positives = 42/69 (60%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGT-GRCIVDKAHRNQCQACRLKKCLNM 62
+H G+ C +R I RN+ C++GT G C VDK HRNQC+ACRLKKCL +
Sbjct: 37 KHYGVYACDGCSGFFKRSI----RRNRTYVCKSGTQGGCPVDKTHRNQCRACRLKKCLEV 92
Query: 63 GMNKDDAQH 71
MNKD QH
Sbjct: 93 NMNKDAVQH 101
Score = 127 (49.8 bits), Expect = 1.7e-07, P = 1.7e-07
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 80 FACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+ C + + C VDK HRNQC+ACRLKKCL + MNKD
Sbjct: 61 YVCKSGTQGGCPVDKTHRNQCRACRLKKCLEVNMNKD 97
>MGI|MGI:1346317 [details] [associations]
symbol:Nr2e3 "nuclear receptor subfamily 2, group E, member
3" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005667 "transcription
factor complex" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=IEA] [GO:0042462 "eye
photoreceptor cell development" evidence=IMP] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045872 "positive
regulation of rhodopsin gene expression" evidence=IGI] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1346317 GO:GO:0008285
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0005667 GO:GO:0000122 GO:GO:0060041 GO:GO:0030522
GO:GO:0042462 HOGENOM:HOG000260820 HOVERGEN:HBG005606
eggNOG:NOG277339 OrthoDB:EOG41C6WF CTD:10002 KO:K08546
EMBL:AF148129 EMBL:AF204053 EMBL:BC017521 IPI:IPI00135703
RefSeq:NP_038736.1 UniGene:Mm.103641 ProteinModelPortal:Q9QXZ7
SMR:Q9QXZ7 STRING:Q9QXZ7 PhosphoSite:Q9QXZ7 PRIDE:Q9QXZ7
Ensembl:ENSMUST00000034831 GeneID:23958 KEGG:mmu:23958
InParanoid:Q9QXZ7 OMA:MLSQHTK NextBio:303796 Bgee:Q9QXZ7
CleanEx:MM_NR2E3 Genevestigator:Q9QXZ7
GermOnline:ENSMUSG00000032292 GO:GO:0045872 Uniprot:Q9QXZ7
Length = 395
Score = 160 (61.4 bits), Expect = 4.4e-11, P = 4.4e-11
Identities = 28/38 (73%), Positives = 30/38 (78%)
Query: 34 CQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQH 71
CQ G G C VDKAHRNQCQACRLKKCL GMN+D Q+
Sbjct: 76 CQVGAGMCPVDKAHRNQCQACRLKKCLQAGMNQDAVQN 113
Score = 131 (51.2 bits), Expect = 6.3e-08, P = 6.3e-08
Identities = 23/27 (85%), Positives = 24/27 (88%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C VDKAHRNQCQACRLKKCL GMN+D
Sbjct: 83 CPVDKAHRNQCQACRLKKCLQAGMNQD 109
Score = 95 (38.5 bits), Expect = 0.00050, P = 0.00050
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 14 CQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQ 50
CQ G C VDKAHRNQCQAC+ +C+ +A NQ
Sbjct: 76 CQVGAGMCPVDKAHRNQCQACRLK--KCL--QAGMNQ 108
>UNIPROTKB|Q9Y5X4 [details] [associations]
symbol:NR2E3 "Photoreceptor-specific nuclear receptor"
species:9606 "Homo sapiens" [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=TAS]
[GO:0005634 "nucleus" evidence=TAS] [GO:0006366 "transcription from
RNA polymerase II promoter" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0007602 "phototransduction"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654
GO:GO:0046872 GO:GO:0007601 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 Orphanet:791 GO:GO:0006367 GO:GO:0007602
HOGENOM:HOG000260820 HOVERGEN:HBG005606 eggNOG:NOG277339
OrthoDB:EOG41C6WF EMBL:AF121129 EMBL:AF148128 EMBL:AJ276674
IPI:IPI00001888 IPI:IPI00215922 RefSeq:NP_055064.1
RefSeq:NP_057430.1 UniGene:Hs.187354 ProteinModelPortal:Q9Y5X4
SMR:Q9Y5X4 MINT:MINT-4302911 STRING:Q9Y5X4 PhosphoSite:Q9Y5X4
DMDM:8928275 PRIDE:Q9Y5X4 DNASU:10002 GeneID:10002 KEGG:hsa:10002
UCSC:uc002ath.1 CTD:10002 GeneCards:GC15P072084 HGNC:HGNC:7974
MIM:268100 MIM:604485 MIM:611131 neXtProt:NX_Q9Y5X4 Orphanet:53540
PharmGKB:PA31757 InParanoid:Q9Y5X4 KO:K08546 BindingDB:Q9Y5X4
ChEMBL:CHEMBL4374 GenomeRNAi:10002 NextBio:37775 CleanEx:HS_NR2E3
Genevestigator:Q9Y5X4 GermOnline:ENSG00000031544 Uniprot:Q9Y5X4
Length = 410
Score = 160 (61.4 bits), Expect = 4.7e-11, P = 4.7e-11
Identities = 28/38 (73%), Positives = 30/38 (78%)
Query: 34 CQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQH 71
CQ G G C VDKAHRNQCQACRLKKCL GMN+D Q+
Sbjct: 83 CQVGAGMCPVDKAHRNQCQACRLKKCLQAGMNQDAVQN 120
Score = 131 (51.2 bits), Expect = 6.7e-08, P = 6.7e-08
Identities = 23/27 (85%), Positives = 24/27 (88%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C VDKAHRNQCQACRLKKCL GMN+D
Sbjct: 90 CPVDKAHRNQCQACRLKKCLQAGMNQD 116
Score = 95 (38.5 bits), Expect = 0.00053, P = 0.00053
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 14 CQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQ 50
CQ G C VDKAHRNQCQAC+ +C+ +A NQ
Sbjct: 83 CQVGAGMCPVDKAHRNQCQACRLK--KCL--QAGMNQ 115
>UNIPROTKB|F1ML62 [details] [associations]
symbol:NR2E3 "Photoreceptor-specific nuclear receptor"
species:9913 "Bos taurus" [GO:0060041 "retina development in
camera-type eye" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0045872 "positive regulation of rhodopsin gene expression"
evidence=IEA] [GO:0042462 "eye photoreceptor cell development"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0008285 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0060041 GO:GO:0042462 UniGene:Bt.241 CTD:10002
KO:K08546 OMA:MLSQHTK GO:GO:0045872 EMBL:DAAA02027989
IPI:IPI01028398 RefSeq:NP_001161372.1 Ensembl:ENSBTAT00000018926
GeneID:281944 KEGG:bta:281944 NextBio:20805821 Uniprot:F1ML62
Length = 411
Score = 160 (61.4 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 28/38 (73%), Positives = 30/38 (78%)
Query: 34 CQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQH 71
CQ G G C VDKAHRNQCQACRLKKCL GMN+D Q+
Sbjct: 75 CQVGAGMCPVDKAHRNQCQACRLKKCLQAGMNQDAVQN 112
Score = 131 (51.2 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 23/27 (85%), Positives = 24/27 (88%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C VDKAHRNQCQACRLKKCL GMN+D
Sbjct: 82 CPVDKAHRNQCQACRLKKCLQAGMNQD 108
Score = 95 (38.5 bits), Expect = 0.00053, P = 0.00053
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 14 CQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQ 50
CQ G C VDKAHRNQCQAC+ +C+ +A NQ
Sbjct: 75 CQVGAGMCPVDKAHRNQCQACRLK--KCL--QAGMNQ 107
>UNIPROTKB|Q9TTF0 [details] [associations]
symbol:NR2E3 "Photoreceptor-specific nuclear receptor"
species:9913 "Bos taurus" [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000260820 HSSP:P19793
eggNOG:NOG277339 EMBL:AF107729 IPI:IPI00954760 UniGene:Bt.241
STRING:Q9TTF0 InParanoid:Q9TTF0 OrthoDB:EOG41C6WF Uniprot:Q9TTF0
Length = 411
Score = 160 (61.4 bits), Expect = 4.8e-11, P = 4.8e-11
Identities = 28/38 (73%), Positives = 30/38 (78%)
Query: 34 CQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQH 71
CQ G G C VDKAHRNQCQACRLKKCL GMN+D Q+
Sbjct: 75 CQVGAGMCPVDKAHRNQCQACRLKKCLQAGMNQDAVQN 112
Score = 131 (51.2 bits), Expect = 6.8e-08, P = 6.8e-08
Identities = 23/27 (85%), Positives = 24/27 (88%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C VDKAHRNQCQACRLKKCL GMN+D
Sbjct: 82 CPVDKAHRNQCQACRLKKCLQAGMNQD 108
Score = 95 (38.5 bits), Expect = 0.00053, P = 0.00053
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 14 CQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQ 50
CQ G C VDKAHRNQCQAC+ +C+ +A NQ
Sbjct: 75 CQVGAGMCPVDKAHRNQCQACRLK--KCL--QAGMNQ 107
>UNIPROTKB|F1SIS0 [details] [associations]
symbol:F1SIS0 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045872
"positive regulation of rhodopsin gene expression" evidence=IEA]
[GO:0042462 "eye photoreceptor cell development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0008285 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0006351 GO:GO:0005667
GO:GO:0000122 GO:GO:0060041 GO:GO:0042462 OMA:MLSQHTK GO:GO:0045872
EMBL:CU570658 Ensembl:ENSSSCT00000005490 Uniprot:F1SIS0
Length = 419
Score = 159 (61.0 bits), Expect = 6.4e-11, P = 6.4e-11
Identities = 28/38 (73%), Positives = 30/38 (78%)
Query: 34 CQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQH 71
CQ G G C VDKAHRNQCQACRLKKCL GMN+D Q+
Sbjct: 83 CQMGAGMCPVDKAHRNQCQACRLKKCLQAGMNQDAVQN 120
Score = 131 (51.2 bits), Expect = 7.0e-08, P = 7.0e-08
Identities = 23/27 (85%), Positives = 24/27 (88%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C VDKAHRNQCQACRLKKCL GMN+D
Sbjct: 90 CPVDKAHRNQCQACRLKKCLQAGMNQD 116
Score = 94 (38.1 bits), Expect = 0.00070, P = 0.00070
Identities = 20/37 (54%), Positives = 24/37 (64%)
Query: 14 CQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQ 50
CQ G C VDKAHRNQCQAC+ +C+ +A NQ
Sbjct: 83 CQMGAGMCPVDKAHRNQCQACRLK--KCL--QAGMNQ 115
>UNIPROTKB|Q91379 [details] [associations]
symbol:NR2E1 "Nuclear receptor subfamily 2 group E member
1" species:9031 "Gallus gallus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0007275 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOVERGEN:HBG005606 KO:K08545 EMBL:S72373
IPI:IPI00600540 PIR:S48074 RefSeq:NP_990501.1 UniGene:Gga.3535
ProteinModelPortal:Q91379 PRIDE:Q91379 GeneID:396082
KEGG:gga:396082 CTD:7101 NextBio:20816140 Uniprot:Q91379
Length = 385
Score = 158 (60.7 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 33/69 (47%), Positives = 41/69 (59%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGT-GRCIVDKAHRNQCQACRLKKCLNM 62
+H G+ C +R I RN+ C++G G C VDK HRNQC+ACRLKKCL +
Sbjct: 26 KHYGVYACDGCSGFFKRSI----RRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEV 81
Query: 63 GMNKDDAQH 71
MNKD QH
Sbjct: 82 NMNKDAVQH 90
Score = 124 (48.7 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 80 FACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+ C + + C VDK HRNQC+ACRLKKCL + MNKD
Sbjct: 50 YVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKD 86
>UNIPROTKB|F1MN68 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000648 "positive regulation of stem cell
proliferation" evidence=IEA] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000178
"negative regulation of neural precursor cell proliferation"
evidence=IEA] [GO:0090049 "regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] [GO:0060291 "long-term
synaptic potentiation" evidence=IEA] [GO:0060164 "regulation of
timing of neuron differentiation" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0048814
"regulation of dendrite morphogenesis" evidence=IEA] [GO:0048712
"negative regulation of astrocyte differentiation" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0021872 "forebrain generation of neurons" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0021764
"amygdala development" evidence=IEA] [GO:0021542 "dentate gyrus
development" evidence=IEA] [GO:0008347 "glial cell migration"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0002118 "aggressive
behavior" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0043066 GO:GO:0046872
GO:GO:0060291 GO:GO:0007601 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030198 GO:GO:0045665 GO:GO:0045766
GO:GO:0001077 GO:GO:0048814 GO:GO:0060041 GO:GO:0035176
GO:GO:0035019 GO:GO:0001662 GO:GO:0045165 GO:GO:0008347
GO:GO:0045787 GO:GO:2000179 GO:GO:0048712 GO:GO:0021960
GO:GO:0021542 GO:GO:2000178 GO:GO:0002118 GO:GO:0021772
GO:GO:0021819 GO:GO:2000648 GO:GO:0021895 GO:GO:0060164
GeneTree:ENSGT00700000104390 KO:K08545 CTD:7101 GO:GO:0021764
GO:GO:0021872 GO:GO:0090049 OMA:ILLEDAW EMBL:DAAA02025945
IPI:IPI00823513 RefSeq:NP_001179582.1 UniGene:Bt.85086 PRIDE:F1MN68
Ensembl:ENSBTAT00000018594 GeneID:528156 KEGG:bta:528156
NextBio:20874755 Uniprot:F1MN68
Length = 385
Score = 158 (60.7 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 33/69 (47%), Positives = 41/69 (59%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGT-GRCIVDKAHRNQCQACRLKKCLNM 62
+H G+ C +R I RN+ C++G G C VDK HRNQC+ACRLKKCL +
Sbjct: 26 KHYGVYACDGCSGFFKRSI----RRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEV 81
Query: 63 GMNKDDAQH 71
MNKD QH
Sbjct: 82 NMNKDAVQH 90
Score = 124 (48.7 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 80 FACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+ C + + C VDK HRNQC+ACRLKKCL + MNKD
Sbjct: 50 YVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKD 86
>UNIPROTKB|F1PD89 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104390 KO:K08545 CTD:7101 EMBL:AAEX03008592
RefSeq:XP_532253.2 ProteinModelPortal:F1PD89
Ensembl:ENSCAFT00000006050 GeneID:475017 KEGG:cfa:475017
Uniprot:F1PD89
Length = 385
Score = 158 (60.7 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 33/69 (47%), Positives = 41/69 (59%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGT-GRCIVDKAHRNQCQACRLKKCLNM 62
+H G+ C +R I RN+ C++G G C VDK HRNQC+ACRLKKCL +
Sbjct: 26 KHYGVYACDGCSGFFKRSI----RRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEV 81
Query: 63 GMNKDDAQH 71
MNKD QH
Sbjct: 82 NMNKDAVQH 90
Score = 124 (48.7 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 80 FACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+ C + + C VDK HRNQC+ACRLKKCL + MNKD
Sbjct: 50 YVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKD 86
>UNIPROTKB|Q9Y466 [details] [associations]
symbol:NR2E1 "Nuclear receptor subfamily 2 group E member
1" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001662 "behavioral fear response" evidence=IEA] [GO:0002118
"aggressive behavior" evidence=IEA] [GO:0007601 "visual perception"
evidence=IEA] [GO:0008347 "glial cell migration" evidence=IEA]
[GO:0021542 "dentate gyrus development" evidence=IEA] [GO:0021764
"amygdala development" evidence=IEA] [GO:0021772 "olfactory bulb
development" evidence=IEA] [GO:0021819 "layer formation in cerebral
cortex" evidence=IEA] [GO:0021872 "forebrain generation of neurons"
evidence=IEA] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=IEA] [GO:0021960 "anterior commissure morphogenesis"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0035019 "somatic stem cell maintenance"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0043066
"negative regulation of apoptotic process" evidence=IEA]
[GO:0045165 "cell fate commitment" evidence=IEA] [GO:0045665
"negative regulation of neuron differentiation" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0048712 "negative regulation of astrocyte differentiation"
evidence=IEA] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IEA] [GO:0060041 "retina development in camera-type eye"
evidence=IEA] [GO:0060164 "regulation of timing of neuron
differentiation" evidence=IEA] [GO:0060291 "long-term synaptic
potentiation" evidence=IEA] [GO:0090049 "regulation of cell
migration involved in sprouting angiogenesis" evidence=IEA]
[GO:2000178 "negative regulation of neural precursor cell
proliferation" evidence=IEA] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000648
"positive regulation of stem cell proliferation" evidence=IEA]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0043066 GO:GO:0007399 GO:GO:0005654
GO:GO:0046872 GO:GO:0060291 GO:GO:0007601 GO:GO:0001078
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030198 GO:GO:0045665
GO:GO:0045766 GO:GO:0001077 GO:GO:0048814 GO:GO:0060041
GO:GO:0035176 GO:GO:0035019 GO:GO:0001662 GO:GO:0006367
GO:GO:0045165 GO:GO:0008347 GO:GO:0045787 GO:GO:2000179
GO:GO:0048712 GO:GO:0021960 GO:GO:0021542 GO:GO:2000178
GO:GO:0002118 GO:GO:0021772 GO:GO:0021819 HOGENOM:HOG000260820
HOVERGEN:HBG005606 GO:GO:2000648 GO:GO:0021895 GO:GO:0060164
eggNOG:NOG277339 KO:K08545 CTD:7101 EMBL:Y13276 EMBL:AF220532
EMBL:AF411525 EMBL:AL078596 EMBL:BC028031 IPI:IPI00843777
RefSeq:NP_003260.1 UniGene:Hs.157688 ProteinModelPortal:Q9Y466
SMR:Q9Y466 STRING:Q9Y466 PhosphoSite:Q9Y466 DMDM:9910804
PRIDE:Q9Y466 DNASU:7101 Ensembl:ENST00000368986 GeneID:7101
KEGG:hsa:7101 UCSC:uc003psg.3 GeneCards:GC06P108487 HGNC:HGNC:7973
HPA:HPA036954 MIM:603849 neXtProt:NX_Q9Y466 PharmGKB:PA31756
OrthoDB:EOG4ZCT4Q PhylomeDB:Q9Y466 ChEMBL:CHEMBL1961788
GenomeRNAi:7101 NextBio:27781 ArrayExpress:Q9Y466 Bgee:Q9Y466
CleanEx:HS_NR2E1 Genevestigator:Q9Y466 GermOnline:ENSG00000112333
GO:GO:0021764 GO:GO:0021872 GO:GO:0090049 Uniprot:Q9Y466
Length = 385
Score = 158 (60.7 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 33/69 (47%), Positives = 41/69 (59%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGT-GRCIVDKAHRNQCQACRLKKCLNM 62
+H G+ C +R I RN+ C++G G C VDK HRNQC+ACRLKKCL +
Sbjct: 26 KHYGVYACDGCSGFFKRSI----RRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEV 81
Query: 63 GMNKDDAQH 71
MNKD QH
Sbjct: 82 NMNKDAVQH 90
Score = 124 (48.7 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 80 FACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+ C + + C VDK HRNQC+ACRLKKCL + MNKD
Sbjct: 50 YVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKD 86
>UNIPROTKB|I3LU21 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104390 KO:K08545 CTD:7101 EMBL:CU469092
RefSeq:XP_003353327.1 ProteinModelPortal:I3LU21
Ensembl:ENSSSCT00000022342 GeneID:100155153 KEGG:ssc:100155153
Uniprot:I3LU21
Length = 385
Score = 158 (60.7 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 33/69 (47%), Positives = 41/69 (59%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGT-GRCIVDKAHRNQCQACRLKKCLNM 62
+H G+ C +R I RN+ C++G G C VDK HRNQC+ACRLKKCL +
Sbjct: 26 KHYGVYACDGCSGFFKRSI----RRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEV 81
Query: 63 GMNKDDAQH 71
MNKD QH
Sbjct: 82 NMNKDAVQH 90
Score = 124 (48.7 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 80 FACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+ C + + C VDK HRNQC+ACRLKKCL + MNKD
Sbjct: 50 YVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKD 86
>MGI|MGI:1100526 [details] [associations]
symbol:Nr2e1 "nuclear receptor subfamily 2, group E, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA;IMP]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IDA;IMP]
[GO:0001662 "behavioral fear response" evidence=IMP] [GO:0002118
"aggressive behavior" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0007420 "brain development" evidence=IMP]
[GO:0007601 "visual perception" evidence=IMP] [GO:0007610
"behavior" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0008347 "glial cell migration"
evidence=IMP] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0021542 "dentate gyrus development" evidence=IMP] [GO:0021764
"amygdala development" evidence=IMP] [GO:0021772 "olfactory bulb
development" evidence=IMP] [GO:0021819 "layer formation in cerebral
cortex" evidence=IMP] [GO:0021872 "forebrain generation of neurons"
evidence=IMP] [GO:0021895 "cerebral cortex neuron differentiation"
evidence=IMP] [GO:0021960 "anterior commissure morphogenesis"
evidence=IMP] [GO:0021987 "cerebral cortex development"
evidence=IMP] [GO:0030198 "extracellular matrix organization"
evidence=IMP] [GO:0035019 "somatic stem cell maintenance"
evidence=IMP] [GO:0035176 "social behavior" evidence=IMP]
[GO:0042826 "histone deacetylase binding" evidence=IPI] [GO:0043010
"camera-type eye development" evidence=IMP] [GO:0043066 "negative
regulation of apoptotic process" evidence=IMP] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045165 "cell
fate commitment" evidence=IGI] [GO:0045665 "negative regulation of
neuron differentiation" evidence=IMP] [GO:0045766 "positive
regulation of angiogenesis" evidence=IMP] [GO:0045787 "positive
regulation of cell cycle" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048712 "negative regulation of astrocyte differentiation"
evidence=IMP] [GO:0048814 "regulation of dendrite morphogenesis"
evidence=IMP] [GO:0051128 "regulation of cellular component
organization" evidence=IMP] [GO:0060041 "retina development in
camera-type eye" evidence=IMP] [GO:0060164 "regulation of timing of
neuron differentiation" evidence=IMP] [GO:0060291 "long-term
synaptic potentiation" evidence=IMP] [GO:0090049 "regulation of
cell migration involved in sprouting angiogenesis" evidence=IMP]
[GO:2000178 "negative regulation of neural precursor cell
proliferation" evidence=IMP] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IMP] [GO:2000648
"positive regulation of stem cell proliferation" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1100526 GO:GO:0005634
GO:GO:0043066 GO:GO:0046872 GO:GO:0003677 GO:GO:0060291
GO:GO:0007601 GO:GO:0001078 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030198 GO:GO:0045665 GO:GO:0045766 GO:GO:0001077
GO:GO:0048814 GO:GO:0060041 GO:GO:0035176 GO:GO:0035019
GO:GO:0001662 GO:GO:0045165 GO:GO:0008347 GO:GO:0045787
GO:GO:2000179 GO:GO:0048712 GO:GO:0021960 GO:GO:0021542
GO:GO:2000178 GO:GO:0002118 GO:GO:0021772 GO:GO:0021819
HOGENOM:HOG000260820 HOVERGEN:HBG005606 GO:GO:2000648 GO:GO:0021895
GO:GO:0060164 eggNOG:NOG277339 KO:K08545 CTD:7101 OrthoDB:EOG4ZCT4Q
GO:GO:0021764 GO:GO:0021872 GO:GO:0090049 EMBL:S77482 EMBL:BC057104
IPI:IPI00131076 RefSeq:NP_689415.1 UniGene:Mm.287100
ProteinModelPortal:Q64104 SMR:Q64104 DIP:DIP-46432N STRING:Q64104
PhosphoSite:Q64104 PRIDE:Q64104 Ensembl:ENSMUST00000019938
GeneID:21907 KEGG:mmu:21907 InParanoid:Q64104 OMA:ILLEDAW
NextBio:301450 Bgee:Q64104 CleanEx:MM_NR2E1 Genevestigator:Q64104
GermOnline:ENSMUSG00000019803 Uniprot:Q64104
Length = 385
Score = 158 (60.7 bits), Expect = 6.8e-11, P = 6.8e-11
Identities = 33/69 (47%), Positives = 41/69 (59%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGT-GRCIVDKAHRNQCQACRLKKCLNM 62
+H G+ C +R I RN+ C++G G C VDK HRNQC+ACRLKKCL +
Sbjct: 26 KHYGVYACDGCSGFFKRSI----RRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEV 81
Query: 63 GMNKDDAQH 71
MNKD QH
Sbjct: 82 NMNKDAVQH 90
Score = 124 (48.7 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 80 FACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+ C + + C VDK HRNQC+ACRLKKCL + MNKD
Sbjct: 50 YVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKD 86
>UNIPROTKB|F1Q176 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000648 "positive regulation of stem cell
proliferation" evidence=IEA] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000178
"negative regulation of neural precursor cell proliferation"
evidence=IEA] [GO:0090049 "regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] [GO:0060291 "long-term
synaptic potentiation" evidence=IEA] [GO:0060164 "regulation of
timing of neuron differentiation" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0048814
"regulation of dendrite morphogenesis" evidence=IEA] [GO:0048712
"negative regulation of astrocyte differentiation" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0021872 "forebrain generation of neurons" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0021764
"amygdala development" evidence=IEA] [GO:0021542 "dentate gyrus
development" evidence=IEA] [GO:0008347 "glial cell migration"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0002118 "aggressive
behavior" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0043066 GO:GO:0046872
GO:GO:0060291 GO:GO:0007601 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030198 GO:GO:0045665 GO:GO:0045766
GO:GO:0001077 GO:GO:0048814 GO:GO:0060041 GO:GO:0035176
GO:GO:0035019 GO:GO:0001662 GO:GO:0045165 GO:GO:0008347
GO:GO:0045787 GO:GO:2000179 GO:GO:0048712 GO:GO:0021960
GO:GO:0021542 GO:GO:2000178 GO:GO:0002118 GO:GO:0021772
GO:GO:0021819 GO:GO:2000648 GO:GO:0021895 GO:GO:0060164
GeneTree:ENSGT00700000104390 GO:GO:0021764 GO:GO:0021872
GO:GO:0090049 OMA:ILLEDAW EMBL:AAEX03008592
Ensembl:ENSCAFT00000035327 Uniprot:F1Q176
Length = 412
Score = 158 (60.7 bits), Expect = 7.9e-11, P = 7.9e-11
Identities = 33/69 (47%), Positives = 41/69 (59%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGT-GRCIVDKAHRNQCQACRLKKCLNM 62
+H G+ C +R I RN+ C++G G C VDK HRNQC+ACRLKKCL +
Sbjct: 48 KHYGVYACDGCSGFFKRSI----RRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEV 103
Query: 63 GMNKDDAQH 71
MNKD QH
Sbjct: 104 NMNKDAVQH 112
Score = 124 (48.7 bits), Expect = 3.9e-07, P = 3.9e-07
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 80 FACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+ C + + C VDK HRNQC+ACRLKKCL + MNKD
Sbjct: 72 YVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKD 108
>UNIPROTKB|F1RT26 [details] [associations]
symbol:NR2E1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000648 "positive regulation of stem cell
proliferation" evidence=IEA] [GO:2000179 "positive regulation of
neural precursor cell proliferation" evidence=IEA] [GO:2000178
"negative regulation of neural precursor cell proliferation"
evidence=IEA] [GO:0090049 "regulation of cell migration involved in
sprouting angiogenesis" evidence=IEA] [GO:0060291 "long-term
synaptic potentiation" evidence=IEA] [GO:0060164 "regulation of
timing of neuron differentiation" evidence=IEA] [GO:0060041 "retina
development in camera-type eye" evidence=IEA] [GO:0048814
"regulation of dendrite morphogenesis" evidence=IEA] [GO:0048712
"negative regulation of astrocyte differentiation" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0045766 "positive regulation of angiogenesis" evidence=IEA]
[GO:0045665 "negative regulation of neuron differentiation"
evidence=IEA] [GO:0045165 "cell fate commitment" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0035176 "social behavior" evidence=IEA]
[GO:0035019 "somatic stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0021960 "anterior commissure morphogenesis" evidence=IEA]
[GO:0021895 "cerebral cortex neuron differentiation" evidence=IEA]
[GO:0021872 "forebrain generation of neurons" evidence=IEA]
[GO:0021819 "layer formation in cerebral cortex" evidence=IEA]
[GO:0021772 "olfactory bulb development" evidence=IEA] [GO:0021764
"amygdala development" evidence=IEA] [GO:0021542 "dentate gyrus
development" evidence=IEA] [GO:0008347 "glial cell migration"
evidence=IEA] [GO:0007601 "visual perception" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0002118 "aggressive
behavior" evidence=IEA] [GO:0001662 "behavioral fear response"
evidence=IEA] [GO:0001078 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0043066 GO:GO:0046872
GO:GO:0060291 GO:GO:0007601 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030198 GO:GO:0045665 GO:GO:0045766
GO:GO:0001077 GO:GO:0048814 GO:GO:0060041 GO:GO:0035176
GO:GO:0035019 GO:GO:0001662 GO:GO:0045165 GO:GO:0008347
GO:GO:0045787 GO:GO:2000179 GO:GO:0048712 GO:GO:0021960
GO:GO:0021542 GO:GO:2000178 GO:GO:0002118 GO:GO:0021772
GO:GO:0021819 GO:GO:2000648 GO:GO:0021895 GO:GO:0060164
GeneTree:ENSGT00700000104390 GO:GO:0021764 GO:GO:0021872
GO:GO:0090049 OMA:ILLEDAW EMBL:CU469092 Ensembl:ENSSSCT00000004846
Uniprot:F1RT26
Length = 421
Score = 158 (60.7 bits), Expect = 8.2e-11, P = 8.2e-11
Identities = 33/69 (47%), Positives = 41/69 (59%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGT-GRCIVDKAHRNQCQACRLKKCLNM 62
+H G+ C +R I RN+ C++G G C VDK HRNQC+ACRLKKCL +
Sbjct: 62 KHYGVYACDGCSGFFKRSI----RRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEV 117
Query: 63 GMNKDDAQH 71
MNKD QH
Sbjct: 118 NMNKDAVQH 126
Score = 124 (48.7 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 80 FACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+ C + + C VDK HRNQC+ACRLKKCL + MNKD
Sbjct: 86 YVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKD 122
>UNIPROTKB|Q6ZMP8 [details] [associations]
symbol:NR2E1 "Nuclear receptor subfamily 2, group E, member
1, isoform CRA_b" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 EMBL:CH471051 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000260820
HOVERGEN:HBG005606 EMBL:AL078596 UniGene:Hs.157688 HGNC:HGNC:7973
OMA:ILLEDAW HSSP:P20393 EMBL:AK131541 IPI:IPI00000354 SMR:Q6ZMP8
STRING:Q6ZMP8 Ensembl:ENST00000368983 Uniprot:Q6ZMP8
Length = 422
Score = 158 (60.7 bits), Expect = 8.3e-11, P = 8.3e-11
Identities = 33/69 (47%), Positives = 41/69 (59%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGT-GRCIVDKAHRNQCQACRLKKCLNM 62
+H G+ C +R I RN+ C++G G C VDK HRNQC+ACRLKKCL +
Sbjct: 63 KHYGVYACDGCSGFFKRSI----RRNRTYVCKSGNQGGCPVDKTHRNQCRACRLKKCLEV 118
Query: 63 GMNKDDAQH 71
MNKD QH
Sbjct: 119 NMNKDAVQH 127
Score = 124 (48.7 bits), Expect = 4.1e-07, P = 4.1e-07
Identities = 22/37 (59%), Positives = 27/37 (72%)
Query: 80 FACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+ C + + C VDK HRNQC+ACRLKKCL + MNKD
Sbjct: 87 YVCKSGNQGGCPVDKTHRNQCRACRLKKCLEVNMNKD 123
>FB|FBgn0015381 [details] [associations]
symbol:dsf "dissatisfaction" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=IEA;ISS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS;NAS;TAS] [GO:0018993
"somatic sex determination" evidence=NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=TAS] [GO:0007530 "sex determination" evidence=TAS]
[GO:0007619 "courtship behavior" evidence=NAS;TAS] [GO:0007617
"mating behavior" evidence=NAS] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA;NAS] [GO:0007620 "copulation"
evidence=NAS] [GO:0018991 "oviposition" evidence=NAS;TAS]
[GO:0045924 "regulation of female receptivity" evidence=NAS]
[GO:0008049 "male courtship behavior" evidence=TAS] [GO:0001078
"RNA polymerase II core promoter proximal region sequence-specific
DNA binding transcription factor activity involved in negative
regulation of transcription" evidence=IDA] [GO:0048047 "mating
behavior, sex discrimination" evidence=TAS] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0035206 "regulation of hemocyte
proliferation" evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0018991
GO:GO:0046872 GO:GO:0004879 GO:GO:0001078 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045924 GO:GO:0008049 GO:GO:0035206
GO:GO:0048047 GO:GO:0007620 GO:GO:0018993 HSSP:P19793 EMBL:AF106677
ProteinModelPortal:O96680 SMR:O96680 STRING:O96680 PRIDE:O96680
FlyBase:FBgn0015381 eggNOG:NOG242640 InParanoid:O96680
OrthoDB:EOG4MW6NV ArrayExpress:O96680 Bgee:O96680 Uniprot:O96680
Length = 693
Score = 154 (59.3 bits), Expect = 5.1e-10, P = 5.1e-10
Identities = 34/71 (47%), Positives = 40/71 (56%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQA-GT--GRCIVDKAHRNQCQACRLKKCL 60
+H G+ C +R I HRN+ C+A G GRC VDK HRNQC+ACRL KC
Sbjct: 23 KHYGIYSCDGCSGFFKRSI----HRNRIYTCKATGDLKGRCPVDKTHRNQCRACRLAKCF 78
Query: 61 NMGMNKDDAQH 71
MNKD QH
Sbjct: 79 QSAMNKDAVQH 89
Score = 120 (47.3 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 22/40 (55%), Positives = 26/40 (65%)
Query: 77 LYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+Y T ++ RC VDK HRNQC+ACRL KC MNKD
Sbjct: 46 IYTCKATGDLKGRCPVDKTHRNQCRACRLAKCFQSAMNKD 85
>FB|FBgn0003720 [details] [associations]
symbol:tll "tailless" species:7227 "Drosophila melanogaster"
[GO:0008293 "torso signaling pathway" evidence=IGI;TAS] [GO:0007362
"terminal region determination" evidence=IGI;NAS;TAS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0003705 "RNA polymerase II distal
enhancer sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0045165 "cell fate
commitment" evidence=IMP] [GO:0001748 "optic lobe placode
development" evidence=IMP] [GO:0009948 "anterior/posterior axis
specification" evidence=TAS] [GO:0006351 "transcription,
DNA-dependent" evidence=NAS] [GO:0007369 "gastrulation"
evidence=NAS] [GO:0001708 "cell fate specification" evidence=TAS]
[GO:0048749 "compound eye development" evidence=NAS] [GO:0003677
"DNA binding" evidence=IDA;NAS] [GO:0001746 "Bolwig's organ
morphogenesis" evidence=TAS] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0035271 "ring gland development" evidence=IMP]
[GO:0051726 "regulation of cell cycle" evidence=IMP] [GO:0055057
"neuroblast division" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 EMBL:AE014297 GO:GO:0005634 GO:GO:0001708
GO:GO:0046872 GO:GO:0003677 GO:GO:0008293 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003705
GO:GO:0051726 GO:GO:0007369 GO:GO:0001746 GO:GO:0001748
GO:GO:0007362 GO:GO:0035271 GeneTree:ENSGT00700000104390
eggNOG:NOG277339 KO:K08545 OMA:ILLEDAW GO:GO:0055057 EMBL:M34639
EMBL:AF019362 EMBL:BT022195 PIR:A35602 RefSeq:NP_524596.1
UniGene:Dm.1906 ProteinModelPortal:P18102 SMR:P18102 DIP:DIP-19302N
IntAct:P18102 MINT:MINT-300240 STRING:P18102 PRIDE:P18102
EnsemblMetazoa:FBtr0085709 GeneID:43656 KEGG:dme:Dmel_CG1378
UCSC:CG1378-RA CTD:43656 FlyBase:FBgn0003720 InParanoid:P18102
OrthoDB:EOG4PRR6T PhylomeDB:P18102 GenomeRNAi:43656 NextBio:835100
Bgee:P18102 GermOnline:CG1378 Uniprot:P18102
Length = 452
Score = 148 (57.2 bits), Expect = 1.2e-09, P = 1.2e-09
Identities = 29/68 (42%), Positives = 43/68 (63%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
+H G+ C AG + + ++ + C++ + G C+VDK HRNQC+ACRL+KC +G
Sbjct: 44 KHYGIYACDGC-AGFFKRSIRRSRQYVCKSQKQGL--CVVDKTHRNQCRACRLRKCFEVG 100
Query: 64 MNKDDAQH 71
MNKD QH
Sbjct: 101 MNKDAVQH 108
Score = 134 (52.2 bits), Expect = 3.8e-08, P = 3.8e-08
Identities = 21/38 (55%), Positives = 29/38 (76%)
Query: 79 EFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
++ C + + C+VDK HRNQC+ACRL+KC +GMNKD
Sbjct: 67 QYVCKSQKQGLCVVDKTHRNQCRACRLRKCFEVGMNKD 104
>WB|WBGene00003657 [details] [associations]
symbol:nhr-67 species:6239 "Caenorhabditis elegans"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0008340 "determination of adult lifespan" evidence=IMP]
[GO:0040011 "locomotion" evidence=IMP] [GO:0040035 "hermaphrodite
genitalia development" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0016477 "cell
migration" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0035262 "gonad morphogenesis" evidence=IMP] InterPro:IPR001628
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634
GO:GO:0008340 GO:GO:0040010 GO:GO:0016477 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0040018
GO:GO:0003700 GO:GO:0006351 GO:GO:0040035 GO:GO:0035262
GeneTree:ENSGT00700000104390 EMBL:Z73103 eggNOG:NOG277339
PIR:T19102 RefSeq:NP_502094.1 ProteinModelPortal:Q9XVV3 SMR:Q9XVV3
DIP:DIP-25535N IntAct:Q9XVV3 MINT:MINT-1049427 STRING:Q9XVV3
EnsemblMetazoa:C08F8.8 GeneID:178024 KEGG:cel:CELE_C08F8.8
UCSC:C08F8.8 CTD:178024 WormBase:C08F8.8 HOGENOM:HOG000017978
InParanoid:Q9XVV3 KO:K08545 OMA:NSPEMGS NextBio:899406
ArrayExpress:Q9XVV3 Uniprot:Q9XVV3
Length = 416
Score = 144 (55.7 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 24/33 (72%), Positives = 28/33 (84%)
Query: 39 GRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQH 71
G+C VDK HRNQC+ACRL+KCL +GMNKD QH
Sbjct: 66 GQCKVDKTHRNQCRACRLRKCLEIGMNKDAVQH 98
Score = 130 (50.8 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 79 EFACTNL---VELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
++ C N E +C VDK HRNQC+ACRL+KCL +GMNKD
Sbjct: 54 QYVCKNKGSPSEGQCKVDKTHRNQCRACRLRKCLEIGMNKD 94
>UNIPROTKB|Q9XVV3 [details] [associations]
symbol:nhr-67 "Nuclear hormone receptor family member
nhr-67" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001628 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0008340
GO:GO:0040010 GO:GO:0016477 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0040018 GO:GO:0003700
GO:GO:0006351 GO:GO:0040035 GO:GO:0035262
GeneTree:ENSGT00700000104390 EMBL:Z73103 eggNOG:NOG277339
PIR:T19102 RefSeq:NP_502094.1 ProteinModelPortal:Q9XVV3 SMR:Q9XVV3
DIP:DIP-25535N IntAct:Q9XVV3 MINT:MINT-1049427 STRING:Q9XVV3
EnsemblMetazoa:C08F8.8 GeneID:178024 KEGG:cel:CELE_C08F8.8
UCSC:C08F8.8 CTD:178024 WormBase:C08F8.8 HOGENOM:HOG000017978
InParanoid:Q9XVV3 KO:K08545 OMA:NSPEMGS NextBio:899406
ArrayExpress:Q9XVV3 Uniprot:Q9XVV3
Length = 416
Score = 144 (55.7 bits), Expect = 2.7e-09, P = 2.7e-09
Identities = 24/33 (72%), Positives = 28/33 (84%)
Query: 39 GRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQH 71
G+C VDK HRNQC+ACRL+KCL +GMNKD QH
Sbjct: 66 GQCKVDKTHRNQCRACRLRKCLEIGMNKDAVQH 98
Score = 130 (50.8 bits), Expect = 8.9e-08, P = 8.9e-08
Identities = 24/41 (58%), Positives = 30/41 (73%)
Query: 79 EFACTNL---VELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
++ C N E +C VDK HRNQC+ACRL+KCL +GMNKD
Sbjct: 54 QYVCKNKGSPSEGQCKVDKTHRNQCRACRLRKCLEIGMNKD 94
>WB|WBGene00003701 [details] [associations]
symbol:nhr-111 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
HOGENOM:HOG000260820 GeneTree:ENSGT00700000104390 EMBL:Z83109
PIR:T22203 RefSeq:NP_507060.2 UniGene:Cel.3575
ProteinModelPortal:O45521 SMR:O45521 DIP:DIP-26766N IntAct:O45521
MINT:MINT-1037788 STRING:O45521 EnsemblMetazoa:F44G3.9
GeneID:185757 KEGG:cel:CELE_F44G3.9 UCSC:F44G3.9 CTD:185757
WormBase:F44G3.9 eggNOG:NOG277339 OMA:LAYEVEM NextBio:929390
Uniprot:O45521
Length = 311
Score = 137 (53.3 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 28 RNQC-QACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLV 86
RN+ C G G C++DKA+RN+C++CR+KKC GMNK+ Q + S Y L
Sbjct: 71 RNKLVHGCWNGDGNCVIDKANRNRCKSCRIKKCFKKGMNKNAVQPERTSHSYTVEYVELP 130
Query: 87 ELR 89
R
Sbjct: 131 SFR 133
Score = 115 (45.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 20/45 (44%), Positives = 33/45 (73%)
Query: 72 LKNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
++N L++ C N + C++DKA+RN+C++CR+KKC GMNK+
Sbjct: 70 VRNKLVH--GCWN-GDGNCVIDKANRNRCKSCRIKKCFKKGMNKN 111
>UNIPROTKB|O45521 [details] [associations]
symbol:nhr-111 "Nuclear hormone receptor family member
nhr-111" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 HOGENOM:HOG000260820
GeneTree:ENSGT00700000104390 EMBL:Z83109 PIR:T22203
RefSeq:NP_507060.2 UniGene:Cel.3575 ProteinModelPortal:O45521
SMR:O45521 DIP:DIP-26766N IntAct:O45521 MINT:MINT-1037788
STRING:O45521 EnsemblMetazoa:F44G3.9 GeneID:185757
KEGG:cel:CELE_F44G3.9 UCSC:F44G3.9 CTD:185757 WormBase:F44G3.9
eggNOG:NOG277339 OMA:LAYEVEM NextBio:929390 Uniprot:O45521
Length = 311
Score = 137 (53.3 bits), Expect = 8.4e-09, P = 8.4e-09
Identities = 26/63 (41%), Positives = 36/63 (57%)
Query: 28 RNQC-QACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLV 86
RN+ C G G C++DKA+RN+C++CR+KKC GMNK+ Q + S Y L
Sbjct: 71 RNKLVHGCWNGDGNCVIDKANRNRCKSCRIKKCFKKGMNKNAVQPERTSHSYTVEYVELP 130
Query: 87 ELR 89
R
Sbjct: 131 SFR 133
Score = 115 (45.5 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 20/45 (44%), Positives = 33/45 (73%)
Query: 72 LKNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
++N L++ C N + C++DKA+RN+C++CR+KKC GMNK+
Sbjct: 70 VRNKLVH--GCWN-GDGNCVIDKANRNRCKSCRIKKCFKKGMNKN 111
>ZFIN|ZDB-GENE-990415-268 [details] [associations]
symbol:thrb "thyroid hormone receptor beta"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IDA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA;IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0000988 "protein binding
transcription factor activity" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-268 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0004887
GO:GO:0000988 EMBL:BX927163 GeneTree:ENSGT00680000099662
EMBL:CR382334 EMBL:CU207349 ProteinModelPortal:G1K2F9
Ensembl:ENSDART00000019247 Bgee:G1K2F9 Uniprot:G1K2F9
Length = 470
Score = 121 (47.7 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 30/74 (40%), Positives = 42/74 (56%)
Query: 13 TCQA--GTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD--- 67
TC+ G R + K + N AC+ G+C++DK RNQCQ CR KKC+ +GM D
Sbjct: 18 TCEGCKGFFRRTIQK-NLNPTYACKY-EGKCVIDKVTRNQCQECRFKKCIAVGMATDLVL 75
Query: 68 -DAQHL-KNSLLYE 79
D++ L K L+ E
Sbjct: 76 DDSKRLAKRKLIEE 89
Score = 111 (44.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 32/80 (40%), Positives = 43/80 (53%)
Query: 41 CIV--DKA--HRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAH 96
C+V DKA + +C C + C G + Q KN L +AC E +C++DK
Sbjct: 2 CVVCGDKATGYHYRCITC--EGC--KGFFRRTIQ--KN-LNPTYACK--YEGKCVIDKVT 52
Query: 97 RNQCQACRLKKCLNMGMNKD 116
RNQCQ CR KKC+ +GM D
Sbjct: 53 RNQCQECRFKKCIAVGMATD 72
Score = 32 (16.3 bits), Expect = 6.4e-08, Sum P(2) = 6.4e-08
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 90 CIVDKAHRNQCQA-CRLKKCLNMGMNKDGK 118
C K + A C L C N G+++ GK
Sbjct: 161 CFYPKERSLKFSAVCSL--CQNEGVHRRGK 188
>WB|WBGene00021417 [details] [associations]
symbol:nhr-236 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104390 EMBL:FO080811 RefSeq:NP_500190.3
ProteinModelPortal:Q9N418 SMR:Q9N418 PaxDb:Q9N418
EnsemblMetazoa:Y38F2AL.5 GeneID:189677 KEGG:cel:CELE_Y38F2AL.5
UCSC:Y38F2AL.5 CTD:189677 WormBase:Y38F2AL.5 eggNOG:NOG271764
HOGENOM:HOG000020978 InParanoid:Q9N418 OMA:HAVQHER Uniprot:Q9N418
Length = 283
Score = 128 (50.1 bits), Expect = 6.6e-08, P = 6.6e-08
Identities = 26/68 (38%), Positives = 38/68 (55%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G+ C+ +R I RN +C+ +G C++D RNQCQACR +KC+ +
Sbjct: 23 RHYGVLSCDGCRGFFKRSI----RRNLRYSCKE-SGDCVIDVTRRNQCQACRFQKCITVA 77
Query: 64 MNKDDAQH 71
MN+ QH
Sbjct: 78 MNRHAVQH 85
Score = 98 (39.6 bits), Expect = 0.00014, P = 0.00014
Identities = 14/26 (53%), Positives = 20/26 (76%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNK 115
C++D RNQCQACR +KC+ + MN+
Sbjct: 55 CVIDVTRRNQCQACRFQKCITVAMNR 80
>FB|FBgn0003651 [details] [associations]
symbol:svp "seven up" species:7227 "Drosophila melanogaster"
[GO:0001078 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in negative regulation of transcription" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=IPI]
[GO:0007503 "fat body development" evidence=TAS] [GO:0061331
"epithelial cell proliferation involved in Malpighian tubule
morphogenesis" evidence=IMP] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS] [GO:0005634 "nucleus"
evidence=ISS;NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0048749
"compound eye development" evidence=NAS] [GO:0004872 "receptor
activity" evidence=NAS;TAS] [GO:0001752 "compound eye photoreceptor
fate commitment" evidence=TAS] [GO:0007465 "R7 cell fate
commitment" evidence=TAS] [GO:0007464 "R3/R4 cell fate commitment"
evidence=TAS] [GO:0007462 "R1/R6 cell fate commitment"
evidence=TAS] [GO:0007510 "cardioblast cell fate determination"
evidence=IGI;IEP] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0007507
"heart development" evidence=NAS;TAS] [GO:0001700 "embryonic
development via the syncytial blastoderm" evidence=NAS] [GO:0007417
"central nervous system development" evidence=NAS] [GO:0007419
"ventral cord development" evidence=TAS] [GO:0042331 "phototaxis"
evidence=IMP] [GO:0007270 "neuron-neuron synaptic transmission"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0046530
"photoreceptor cell differentiation" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 EMBL:AE014297 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0007601 UniGene:Dm.20676 GeneID:41491
KEGG:dme:Dmel_CG11502 CTD:41491 FlyBase:FBgn0003651
GeneTree:ENSGT00670000097509 KO:K14032 GenomeRNAi:41491
NextBio:824138 GermOnline:CG11502 GO:GO:0004879 GO:GO:0001078
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 GO:GO:0007510
GO:GO:0061331 GO:GO:0007503 GO:GO:0007270 GO:GO:0042331
GO:GO:0007462 GO:GO:0007464 GO:GO:0007465 GO:GO:0007419
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 EMBL:M28864
PIR:B32693 RefSeq:NP_731681.1 ProteinModelPortal:P16376 SMR:P16376
STRING:P16376 EnsemblMetazoa:FBtr0082563 InParanoid:P16376
PhylomeDB:P16376 Bgee:P16376 Uniprot:P16376
Length = 746
Score = 134 (52.2 bits), Expect = 7.9e-08, P = 7.9e-08
Identities = 26/58 (44%), Positives = 35/58 (60%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQ 70
TC+ G + RN +C+ G+ C +D+ HRNQCQ CRLKKCL MGM ++ Q
Sbjct: 216 TCE-GCKSFFKRSVRRNLTYSCR-GSRNCPIDQHHRNQCQYCRLKKCLKMGMRREAVQ 271
Score = 111 (44.1 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 18/27 (66%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C +D+ HRNQCQ CRLKKCL MGM ++
Sbjct: 242 CPIDQHHRNQCQYCRLKKCLKMGMRRE 268
>UNIPROTKB|F1M5T7 [details] [associations]
symbol:Hnf4a "Hepatocyte nuclear factor 4-alpha"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 RGD:2810
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 IPI:IPI00947962
Ensembl:ENSRNOT00000064595 ArrayExpress:F1M5T7 Uniprot:F1M5T7
Length = 190
Score = 122 (48.0 bits), Expect = 8.7e-08, P = 8.7e-08
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 2 TFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLN 61
T +H G + C+ G R V K H C+ + +C+VDK RNQC+ CRLKKC
Sbjct: 43 TGKHYGASSCDGCK-GFFRRSVRKNHMYSCRFSR----QCVVDKDKRNQCRYCRLKKCFR 97
Query: 62 MGMNKDDAQHLKNSL 76
GM K+ Q+ ++ +
Sbjct: 98 AGMKKEAVQNERDRI 112
Score = 103 (41.3 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+C+VDK RNQC+ CRLKKC GM K+
Sbjct: 76 QCVVDKDKRNQCRYCRLKKCFRAGMKKE 103
>ZFIN|ZDB-GENE-041210-198 [details] [associations]
symbol:nr2c1 "nuclear receptor subfamily 2, group
C, member 1" species:7955 "Danio rerio" [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-041210-198 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00700000104390 HOVERGEN:HBG008596
OMA:MEHIWRM EMBL:BX640593 IPI:IPI00494218 UniGene:Dr.42016
SMR:Q5RH32 Ensembl:ENSDART00000066948 Ensembl:ENSDART00000128968
InParanoid:Q5RH32 Uniprot:Q5RH32
Length = 600
Score = 132 (51.5 bits), Expect = 9.6e-08, P = 9.6e-08
Identities = 25/67 (37%), Positives = 39/67 (58%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R I +N C+ G+G C+++K HRN+CQ CRL++C+ +G
Sbjct: 123 RHYGAVSCEGCKGFFKRSI----RKNLVYTCR-GSGECVINKHHRNRCQYCRLQRCMALG 177
Query: 64 MNKDDAQ 70
M +D Q
Sbjct: 178 MKQDSVQ 184
Score = 109 (43.4 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 41 CIV--DKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRN 98
C+V DKA A + C G K + ++ +L+Y C E C+++K HRN
Sbjct: 113 CVVCGDKASGRHYGAVSCEGC--KGFFK---RSIRKNLVY--TCRGSGE--CVINKHHRN 163
Query: 99 QCQACRLKKCLNMGMNKD 116
+CQ CRL++C+ +GM +D
Sbjct: 164 RCQYCRLQRCMALGMKQD 181
>UNIPROTKB|E2QW41 [details] [associations]
symbol:NR2F2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0060849 "regulation of transcription involved
in lymphatic endothelial cell fate commitment" evidence=IEA]
[GO:0060707 "trophoblast giant cell differentiation" evidence=IEA]
[GO:0060674 "placenta blood vessel development" evidence=IEA]
[GO:0060173 "limb development" evidence=IEA] [GO:0048514 "blood
vessel morphogenesis" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA] [GO:0009956 "radial
pattern formation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001972
"retinoic acid binding" evidence=IEA] [GO:0001937 "negative
regulation of endothelial cell proliferation" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 EMBL:AAEX03002267
Ensembl:ENSCAFT00000012887 NextBio:20854275 Uniprot:E2QW41
Length = 394
Score = 129 (50.5 bits), Expect = 1.0e-07, P = 1.0e-07
Identities = 31/82 (37%), Positives = 41/82 (50%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQHL 72
TC+ G + RN C+A C +D+ HRNQCQ CRLKKCL +GM ++ Q
Sbjct: 95 TCE-GCKSFFKRSVRRNLSYTCRANRN-CPIDQHHRNQCQYCRLKKCLKVGMRREAVQRG 152
Query: 73 KNSLLY----EFACTNLVELRC 90
+ +FA TN L C
Sbjct: 153 RMPPTQPTHGQFALTNGDPLNC 174
Score = 110 (43.8 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
K S+ + T C +D+ HRNQCQ CRLKKCL +GM ++
Sbjct: 104 KRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRRE 147
>UNIPROTKB|Q90733 [details] [associations]
symbol:NR2F2 "COUP transcription factor 2" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0030522 "intracellular
receptor mediated signaling pathway" evidence=ISS] [GO:0001972
"retinoic acid binding" evidence=ISS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISS] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 HOGENOM:HOG000260820
HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H CTD:7026 KO:K08548
GO:GO:0001972 EMBL:U00697 IPI:IPI00598209 PIR:I50689
RefSeq:NP_989752.1 UniGene:Gga.4445 ProteinModelPortal:Q90733
SMR:Q90733 STRING:Q90733 GeneID:386585 KEGG:gga:386585
InParanoid:Q90733 NextBio:20813947 Uniprot:Q90733
Length = 410
Score = 129 (50.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/82 (37%), Positives = 41/82 (50%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQHL 72
TC+ G + RN C+A C +D+ HRNQCQ CRLKKCL +GM ++ Q
Sbjct: 91 TCE-GCKSFFKRSVRRNLSYTCRANRN-CPIDQHHRNQCQYCRLKKCLKVGMRREAVQRG 148
Query: 73 KNSLLY----EFACTNLVELRC 90
+ +FA TN L C
Sbjct: 149 RMPPTQPTHGQFALTNGDPLNC 170
Score = 110 (43.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
K S+ + T C +D+ HRNQCQ CRLKKCL +GM ++
Sbjct: 100 KRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRRE 143
>WB|WBGene00015497 [details] [associations]
symbol:nhr-76 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00530000069008
EMBL:FO080374 RefSeq:NP_499961.2 ProteinModelPortal:Q65CM0
SMR:Q65CM0 IntAct:Q65CM0 STRING:Q65CM0 EnsemblMetazoa:C05G6.1
GeneID:182276 KEGG:cel:CELE_C05G6.1 UCSC:C05G6.1 CTD:182276
WormBase:C05G6.1 eggNOG:NOG244355 InParanoid:Q65CM0 OMA:WFEFYAK
NextBio:917006 Uniprot:Q65CM0
Length = 480
Score = 130 (50.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G C A R +V + R C+ G C +D+ HR+ C+ACR +C++MGM
Sbjct: 90 HFGCIACAACSAFFRRTVV-LSRRYYCRRDPVGNSLCPLDRRHRSNCRACRYVRCIDMGM 148
Query: 65 NKDDAQHLKNSL 76
N Q+L++S+
Sbjct: 149 NPSSVQNLRDSI 160
>UNIPROTKB|Q65CM0 [details] [associations]
symbol:nhr-76 "Protein NHR-76" species:6239 "Caenorhabditis
elegans" [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00530000069008
EMBL:FO080374 RefSeq:NP_499961.2 ProteinModelPortal:Q65CM0
SMR:Q65CM0 IntAct:Q65CM0 STRING:Q65CM0 EnsemblMetazoa:C05G6.1
GeneID:182276 KEGG:cel:CELE_C05G6.1 UCSC:C05G6.1 CTD:182276
WormBase:C05G6.1 eggNOG:NOG244355 InParanoid:Q65CM0 OMA:WFEFYAK
NextBio:917006 Uniprot:Q65CM0
Length = 480
Score = 130 (50.8 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 25/72 (34%), Positives = 39/72 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G C A R +V + R C+ G C +D+ HR+ C+ACR +C++MGM
Sbjct: 90 HFGCIACAACSAFFRRTVV-LSRRYYCRRDPVGNSLCPLDRRHRSNCRACRYVRCIDMGM 148
Query: 65 NKDDAQHLKNSL 76
N Q+L++S+
Sbjct: 149 NPSSVQNLRDSI 160
>UNIPROTKB|Q9TTR7 [details] [associations]
symbol:NR2F2 "COUP transcription factor 2" species:9913
"Bos taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS] [GO:0001972 "retinoic acid binding"
evidence=ISS] [GO:0005634 "nucleus" evidence=IEA] [GO:0060849
"regulation of transcription involved in lymphatic endothelial cell
fate commitment" evidence=IEA] [GO:0060707 "trophoblast giant cell
differentiation" evidence=IEA] [GO:0060674 "placenta blood vessel
development" evidence=IEA] [GO:0060173 "limb development"
evidence=IEA] [GO:0048514 "blood vessel morphogenesis"
evidence=IEA] [GO:0045736 "negative regulation of cyclin-dependent
protein serine/threonine kinase activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA] [GO:0009956 "radial
pattern formation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0001937 "negative regulation of endothelial cell
proliferation" evidence=IEA] [GO:0001893 "maternal placenta
development" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0001764
GO:GO:0045893 GO:GO:0009952 GO:GO:0046872 eggNOG:NOG327099
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900 GO:GO:0000122
GO:GO:0001937 GO:GO:0060173 GO:GO:0045736 GO:GO:0010596
GO:GO:0007519 HOGENOM:HOG000260820 HOVERGEN:HBG005606
OrthoDB:EOG4MGS7H EMBL:AJ249441 EMBL:BC123677 IPI:IPI00695873
PIR:JH0787 RefSeq:NP_776827.1 UniGene:Bt.53763
ProteinModelPortal:Q9TTR7 SMR:Q9TTR7 STRING:Q9TTR7
Ensembl:ENSBTAT00000023969 GeneID:281945 KEGG:bta:281945 CTD:7026
InParanoid:Q9TTR7 KO:K08548 OMA:GPPNNTQ NextBio:20805822
ArrayExpress:Q9TTR7 GO:GO:0001972 GO:GO:0009956 GO:GO:0060849
Uniprot:Q9TTR7
Length = 414
Score = 129 (50.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/82 (37%), Positives = 41/82 (50%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQHL 72
TC+ G + RN C+A C +D+ HRNQCQ CRLKKCL +GM ++ Q
Sbjct: 95 TCE-GCKSFFKRSVRRNLSYTCRANRN-CPIDQHHRNQCQYCRLKKCLKVGMRREAVQRG 152
Query: 73 KNSLLY----EFACTNLVELRC 90
+ +FA TN L C
Sbjct: 153 RMPPTQPSHGQFALTNGDPLNC 174
Score = 110 (43.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
K S+ + T C +D+ HRNQCQ CRLKKCL +GM ++
Sbjct: 104 KRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRRE 147
>UNIPROTKB|P24468 [details] [associations]
symbol:NR2F2 "COUP transcription factor 2" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0001893 "maternal
placenta development" evidence=IEA] [GO:0007519 "skeletal muscle
tissue development" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0009956 "radial pattern formation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0032355 "response to estradiol stimulus" evidence=IEA]
[GO:0048514 "blood vessel morphogenesis" evidence=IEA] [GO:0060173
"limb development" evidence=IEA] [GO:0060674 "placenta blood vessel
development" evidence=IEA] [GO:0060707 "trophoblast giant cell
differentiation" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IPI] [GO:0001972 "retinoic acid
binding" evidence=IDA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IC;IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0003714 "transcription corepressor
activity" evidence=TAS] [GO:0006629 "lipid metabolic process"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0007165 "signal
transduction" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IDA] [GO:0010596
"negative regulation of endothelial cell migration" evidence=IMP]
[GO:0001937 "negative regulation of endothelial cell proliferation"
evidence=IMP] [GO:0060849 "regulation of transcription involved in
lymphatic endothelial cell fate commitment" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IDA;TAS] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0003714 GO:GO:0001764
Pathway_Interaction_DB:telomerasepathway GO:GO:0045893
GO:GO:0032355 GO:GO:0009952 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
Pathway_Interaction_DB:hnf3apathway GO:GO:0048514 GO:GO:0006629
GO:GO:0030900 GO:GO:0000122 GO:GO:0001937 EMBL:CH471101
GO:GO:0060173 GO:GO:0045736 GO:GO:0010596 GO:GO:0007519
HOGENOM:HOG000260820 HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H
UniGene:Hs.519445 CTD:7026 KO:K08548 OMA:GPPNNTQ GO:GO:0001972
GO:GO:0009956 GO:GO:0060849 EMBL:M64497 EMBL:U60477 EMBL:AB307711
EMBL:FM208183 EMBL:AK298824 EMBL:AK301595 EMBL:AK316086
EMBL:HQ692849 EMBL:HQ692850 EMBL:AC016251 EMBL:BC014664
EMBL:BC042897 EMBL:BC106083 EMBL:M62760 IPI:IPI00028611
IPI:IPI00789037 PIR:A37133 RefSeq:NP_001138627.1
RefSeq:NP_001138628.1 RefSeq:NP_001138629.1 RefSeq:NP_066285.1
UniGene:Hs.347991 PDB:3CJW PDBsum:3CJW ProteinModelPortal:P24468
SMR:P24468 DIP:DIP-29713N IntAct:P24468 MINT:MINT-1183332
STRING:P24468 PhosphoSite:P24468 DMDM:114203 PRIDE:P24468
Ensembl:ENST00000394166 Ensembl:ENST00000394171
Ensembl:ENST00000421109 Ensembl:ENST00000453270 GeneID:7026
KEGG:hsa:7026 UCSC:uc010uri.2 GeneCards:GC15P096869 HGNC:HGNC:7976
MIM:107773 neXtProt:NX_P24468 PharmGKB:PA31759 InParanoid:P24468
PhylomeDB:P24468 ChEMBL:CHEMBL1961790 EvolutionaryTrace:P24468
GenomeRNAi:7026 NextBio:27451 ArrayExpress:P24468 Bgee:P24468
CleanEx:HS_NR2F2 Genevestigator:P24468 GermOnline:ENSG00000185551
Uniprot:P24468
Length = 414
Score = 129 (50.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/82 (37%), Positives = 41/82 (50%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQHL 72
TC+ G + RN C+A C +D+ HRNQCQ CRLKKCL +GM ++ Q
Sbjct: 95 TCE-GCKSFFKRSVRRNLSYTCRANRN-CPIDQHHRNQCQYCRLKKCLKVGMRREAVQRG 152
Query: 73 KNSLLY----EFACTNLVELRC 90
+ +FA TN L C
Sbjct: 153 RMPPTQPTHGQFALTNGDPLNC 174
Score = 110 (43.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
K S+ + T C +D+ HRNQCQ CRLKKCL +GM ++
Sbjct: 104 KRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRRE 147
>UNIPROTKB|F1SCJ6 [details] [associations]
symbol:NR2F2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060849 "regulation of transcription involved in
lymphatic endothelial cell fate commitment" evidence=IEA]
[GO:0060707 "trophoblast giant cell differentiation" evidence=IEA]
[GO:0060674 "placenta blood vessel development" evidence=IEA]
[GO:0060173 "limb development" evidence=IEA] [GO:0048514 "blood
vessel morphogenesis" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA] [GO:0009956 "radial
pattern formation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0009566 "fertilization"
evidence=IEA] [GO:0007519 "skeletal muscle tissue development"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0001972
"retinoic acid binding" evidence=IEA] [GO:0001937 "negative
regulation of endothelial cell proliferation" evidence=IEA]
[GO:0001893 "maternal placenta development" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0001764 GO:GO:0045893
GO:GO:0009952 GO:GO:0046872 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0048514
GO:GO:0030900 GO:GO:0000122 GO:GO:0001937 GO:GO:0060173
GO:GO:0045736 GO:GO:0010596 GO:GO:0007519 CTD:7026 KO:K08548
OMA:GPPNNTQ GO:GO:0001972 GO:GO:0009956 GO:GO:0060849 EMBL:CU407120
RefSeq:NP_001177181.1 UniGene:Ssc.8676 GeneID:100153983
KEGG:ssc:100153983 Ensembl:ENSSSCT00000002511 Uniprot:F1SCJ6
Length = 414
Score = 129 (50.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/82 (37%), Positives = 41/82 (50%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQHL 72
TC+ G + RN C+A C +D+ HRNQCQ CRLKKCL +GM ++ Q
Sbjct: 95 TCE-GCKSFFKRSVRRNLSYTCRANRN-CPIDQHHRNQCQYCRLKKCLKVGMRREAVQRG 152
Query: 73 KNSLLY----EFACTNLVELRC 90
+ +FA TN L C
Sbjct: 153 RMPPTQPTHGQFALTNGDPLNC 174
Score = 110 (43.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
K S+ + T C +D+ HRNQCQ CRLKKCL +GM ++
Sbjct: 104 KRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRRE 147
>MGI|MGI:1352452 [details] [associations]
symbol:Nr2f2 "nuclear receptor subfamily 2, group F, member
2" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001701 "in utero embryonic development" evidence=IMP]
[GO:0001764 "neuron migration" evidence=IDA] [GO:0001893 "maternal
placenta development" evidence=IMP] [GO:0001937 "negative
regulation of endothelial cell proliferation" evidence=ISO]
[GO:0001972 "retinoic acid binding" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0007519 "skeletal muscle tissue development" evidence=IMP]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009566
"fertilization" evidence=IMP] [GO:0009952 "anterior/posterior
pattern specification" evidence=IMP] [GO:0009956 "radial pattern
formation" evidence=IMP] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=ISO] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=ISO]
[GO:0030900 "forebrain development" evidence=IDA] [GO:0042803
"protein homodimerization activity" evidence=ISO] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=ISO;IDA]
[GO:0045736 "negative regulation of cyclin-dependent protein
serine/threonine kinase activity" evidence=ISO] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048514 "blood vessel morphogenesis" evidence=IMP] [GO:0060173
"limb development" evidence=IMP] [GO:0060674 "placenta blood vessel
development" evidence=IMP] [GO:0060707 "trophoblast giant cell
differentiation" evidence=IMP] [GO:0060849 "regulation of
transcription involved in lymphatic endothelial cell fate
commitment" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1352452 GO:GO:0005634
GO:GO:0001764 GO:GO:0045893 GO:GO:0032355 GO:GO:0009952
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900 GO:GO:0009566
GO:GO:0000122 GO:GO:0001937 GO:GO:0001893 GO:GO:0060173
GO:GO:0045736 GO:GO:0010596 GO:GO:0007519 HOGENOM:HOG000260820
HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H CTD:7026 KO:K08548 OMA:GPPNNTQ
GO:GO:0001972 GO:GO:0009956 GO:GO:0060849 EMBL:X76653 EMBL:U07635
EMBL:BC042484 IPI:IPI00117234 RefSeq:NP_033827.2 UniGene:Mm.158143
ProteinModelPortal:P43135 SMR:P43135 STRING:P43135
PhosphoSite:P43135 PaxDb:P43135 PRIDE:P43135
Ensembl:ENSMUST00000032768 GeneID:11819 KEGG:mmu:11819
InParanoid:P43135 NextBio:279711 Bgee:P43135 CleanEx:MM_NR2F2
Genevestigator:P43135 GermOnline:ENSMUSG00000030551 GO:GO:0001945
GO:GO:0060674 GO:GO:0060707 Uniprot:P43135
Length = 414
Score = 129 (50.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/82 (37%), Positives = 41/82 (50%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQHL 72
TC+ G + RN C+A C +D+ HRNQCQ CRLKKCL +GM ++ Q
Sbjct: 95 TCE-GCKSFFKRSVRRNLSYTCRANRN-CPIDQHHRNQCQYCRLKKCLKVGMRREAVQRG 152
Query: 73 KNSLLY----EFACTNLVELRC 90
+ +FA TN L C
Sbjct: 153 RMPPTQPTHGQFALTNGDPLNC 174
Score = 110 (43.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
K S+ + T C +D+ HRNQCQ CRLKKCL +GM ++
Sbjct: 104 KRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRRE 147
>RGD|69305 [details] [associations]
symbol:Nr2f2 "nuclear receptor subfamily 2, group F, member 2"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0001701 "in utero embryonic development" evidence=ISO]
[GO:0001764 "neuron migration" evidence=IEA;ISO] [GO:0001893
"maternal placenta development" evidence=IEA;ISO] [GO:0001937
"negative regulation of endothelial cell proliferation"
evidence=IEA;ISO] [GO:0001972 "retinoic acid binding"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISO] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription factor
activity" evidence=IEA;ISO;ISS] [GO:0005634 "nucleus"
evidence=IEA;ISO;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0007519 "skeletal muscle tissue development" evidence=IEA;ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0009566
"fertilization" evidence=IEA;ISO] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA;ISO] [GO:0009956 "radial pattern
formation" evidence=IEA;ISO] [GO:0010596 "negative regulation of
endothelial cell migration" evidence=IEA;ISO] [GO:0030522
"intracellular receptor mediated signaling pathway" evidence=ISO]
[GO:0030900 "forebrain development" evidence=IEA;ISO] [GO:0032355
"response to estradiol stimulus" evidence=IEP] [GO:0042803 "protein
homodimerization activity" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO;IDA] [GO:0045736
"negative regulation of cyclin-dependent protein serine/threonine
kinase activity" evidence=IEA;ISO] [GO:0045892 "negative regulation
of transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO;ISS]
[GO:0048514 "blood vessel morphogenesis" evidence=IEA;ISO]
[GO:0060173 "limb development" evidence=IEA;ISO] [GO:0060674
"placenta blood vessel development" evidence=IEA;ISO] [GO:0060707
"trophoblast giant cell differentiation" evidence=IEA;ISO]
[GO:0060849 "regulation of transcription involved in lymphatic
endothelial cell fate commitment" evidence=IEA;ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:69305 GO:GO:0005634 GO:GO:0001764 GO:GO:0045893
GO:GO:0032355 GO:GO:0009952 GO:GO:0046872 eggNOG:NOG327099
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900 GO:GO:0000122
GO:GO:0001937 GO:GO:0060173 GO:GO:0045736 GO:GO:0010596
GO:GO:0007519 HOGENOM:HOG000260820 HOVERGEN:HBG005606 CTD:7026
KO:K08548 OMA:GPPNNTQ GO:GO:0001972 GO:GO:0009956 GO:GO:0060849
EMBL:AF003944 IPI:IPI00192619 RefSeq:NP_542956.1 UniGene:Rn.17815
ProteinModelPortal:O09018 SMR:O09018 STRING:O09018
PhosphoSite:O09018 Ensembl:ENSRNOT00000014152 GeneID:113984
KEGG:rno:113984 UCSC:RGD:69305 InParanoid:O09018 NextBio:618125
ArrayExpress:O09018 Genevestigator:O09018
GermOnline:ENSRNOG00000010308 Uniprot:O09018
Length = 414
Score = 129 (50.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/82 (37%), Positives = 41/82 (50%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQHL 72
TC+ G + RN C+A C +D+ HRNQCQ CRLKKCL +GM ++ Q
Sbjct: 95 TCE-GCKSFFKRSVRRNLSYTCRANRN-CPIDQHHRNQCQYCRLKKCLKVGMRREAVQRG 152
Query: 73 KNSLLY----EFACTNLVELRC 90
+ +FA TN L C
Sbjct: 153 RMPPTQPTHGQFALTNGDPLNC 174
Score = 110 (43.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
K S+ + T C +D+ HRNQCQ CRLKKCL +GM ++
Sbjct: 104 KRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRRE 147
>UNIPROTKB|O09018 [details] [associations]
symbol:Nr2f2 "COUP transcription factor 2" species:10116
"Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:69305 GO:GO:0005634 GO:GO:0001764
GO:GO:0045893 GO:GO:0032355 GO:GO:0009952 GO:GO:0046872
eggNOG:NOG327099 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0048514 GO:GO:0030900
GO:GO:0000122 GO:GO:0001937 GO:GO:0060173 GO:GO:0045736
GO:GO:0010596 GO:GO:0007519 HOGENOM:HOG000260820 HOVERGEN:HBG005606
CTD:7026 KO:K08548 OMA:GPPNNTQ GO:GO:0001972 GO:GO:0009956
GO:GO:0060849 EMBL:AF003944 IPI:IPI00192619 RefSeq:NP_542956.1
UniGene:Rn.17815 ProteinModelPortal:O09018 SMR:O09018 STRING:O09018
PhosphoSite:O09018 Ensembl:ENSRNOT00000014152 GeneID:113984
KEGG:rno:113984 UCSC:RGD:69305 InParanoid:O09018 NextBio:618125
ArrayExpress:O09018 Genevestigator:O09018
GermOnline:ENSRNOG00000010308 Uniprot:O09018
Length = 414
Score = 129 (50.5 bits), Expect = 1.1e-07, P = 1.1e-07
Identities = 31/82 (37%), Positives = 41/82 (50%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQHL 72
TC+ G + RN C+A C +D+ HRNQCQ CRLKKCL +GM ++ Q
Sbjct: 95 TCE-GCKSFFKRSVRRNLSYTCRANRN-CPIDQHHRNQCQYCRLKKCLKVGMRREAVQRG 152
Query: 73 KNSLLY----EFACTNLVELRC 90
+ +FA TN L C
Sbjct: 153 RMPPTQPTHGQFALTNGDPLNC 174
Score = 110 (43.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
K S+ + T C +D+ HRNQCQ CRLKKCL +GM ++
Sbjct: 104 KRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRRE 147
>ZFIN|ZDB-GENE-040426-1438 [details] [associations]
symbol:nr2f1b "nuclear receptor subfamily 2, group
F, member 1b" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-040426-1438 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
HOGENOM:HOG000260820 HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H
EMBL:BC056748 EMBL:BC065651 IPI:IPI00482303 IPI:IPI00923764
RefSeq:NP_956886.1 UniGene:Dr.86046 HSSP:P19793
ProteinModelPortal:Q6PH18 SMR:Q6PH18 Ensembl:ENSDART00000027242
GeneID:393564 KEGG:dre:393564 CTD:393564 InParanoid:Q6PH18
OMA:MENIRIF NextBio:20814585 ArrayExpress:Q6PH18 Bgee:Q6PH18
Uniprot:Q6PH18
Length = 389
Score = 128 (50.1 bits), Expect = 1.3e-07, P = 1.3e-07
Identities = 26/58 (44%), Positives = 33/58 (56%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQ 70
TC+ G + RN C+A C VD+ HRNQCQ CRLKKCL +GM ++ Q
Sbjct: 70 TCE-GCKSFFKRSVRRNLSYTCRANRN-CPVDQHHRNQCQYCRLKKCLKVGMRREAVQ 125
Score = 111 (44.1 bits), Expect = 9.1e-06, P = 9.1e-06
Identities = 21/44 (47%), Positives = 27/44 (61%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
K S+ + T C VD+ HRNQCQ CRLKKCL +GM ++
Sbjct: 79 KRSVRRNLSYTCRANRNCPVDQHHRNQCQYCRLKKCLKVGMRRE 122
>UNIPROTKB|F1N056 [details] [associations]
symbol:NR2F1 "COUP transcription factor 1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522 IPI:IPI00710549
OMA:DKGQGQP EMBL:DAAA02021281 Ensembl:ENSBTAT00000023401
Uniprot:F1N056
Length = 353
Score = 127 (49.8 bits), Expect = 1.4e-07, P = 1.4e-07
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQ 70
TC+ G + RN C+A C +D+ HRNQCQ CRLKKCL +GM ++ Q
Sbjct: 32 TCE-GCKSFFKRSVRRNLTYTCRANRN-CPIDQHHRNQCQYCRLKKCLKVGMRREAVQ 87
Score = 109 (43.4 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
K S+ T C +D+ HRNQCQ CRLKKCL +GM ++
Sbjct: 41 KRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRRE 84
>WB|WBGene00003603 [details] [associations]
symbol:nhr-4 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:Z81074
GeneTree:ENSGT00700000104802 EMBL:AF083223 PIR:T21645 PIR:T43346
RefSeq:NP_501775.1 UniGene:Cel.19600 ProteinModelPortal:O45436
SMR:O45436 DIP:DIP-25524N IntAct:O45436 MINT:MINT-1120817
PaxDb:O45436 EnsemblMetazoa:F32B6.1 GeneID:177839
KEGG:cel:CELE_F32B6.1 UCSC:F32B6.1.2 CTD:177839 WormBase:F32B6.1
eggNOG:NOG277733 HOGENOM:HOG000017160 InParanoid:O45436 OMA:DVAFGKH
NextBio:898600 Uniprot:O45436
Length = 492
Score = 116 (45.9 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 27/68 (39%), Positives = 37/68 (54%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
+H G+ C+ R + R Q +C+ G G C V K HRN C++CRLKKC +G
Sbjct: 60 KHYGINACNGCKGFFRRSVWS---RRQ-YSCRFG-GDCPVVKEHRNVCRSCRLKKCFEVG 114
Query: 64 MNKDDAQH 71
MN D Q+
Sbjct: 115 MNPDSVQN 122
Score = 99 (39.9 bits), Expect = 0.00026, P = 0.00026
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C V K HRN C++CRLKKC +GMN D
Sbjct: 92 CPVVKEHRNVCRSCRLKKCFEVGMNPD 118
Score = 34 (17.0 bits), Expect = 1.5e-07, Sum P(2) = 1.5e-07
Identities = 6/27 (22%), Positives = 14/27 (51%)
Query: 71 HLKNSLLYEFACTNLVELRCIVDKAHR 97
HL N ++ + N++E ++ H+
Sbjct: 453 HLMNEGVHVTSLFNIIEFDELIQATHK 479
>ZFIN|ZDB-GENE-990415-253 [details] [associations]
symbol:nr2f5 "nuclear receptor subfamily 2, group
F, member 5" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0032526 "response to retinoic acid" evidence=IMP]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0007601 "visual
perception" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0050896 "response to stimulus"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-990415-253 GO:GO:0005634
GO:GO:0046872 GO:GO:0007601 eggNOG:NOG327099
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0032526 GO:GO:0030522 HOGENOM:HOG000260820
HOVERGEN:HBG005606 EMBL:X70300 IPI:IPI00492421 PIR:S35334
RefSeq:NP_571261.1 UniGene:Dr.22 ProteinModelPortal:Q06726
SMR:Q06726 STRING:Q06726 Ensembl:ENSDART00000040769 GeneID:30427
KEGG:dre:30427 CTD:30427 InParanoid:Q06726 KO:K08702 OMA:HYNENGP
OrthoDB:EOG4JHCFP NextBio:20806829 ArrayExpress:Q06726 Bgee:Q06726
Uniprot:Q06726
Length = 403
Score = 127 (49.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 27/65 (41%), Positives = 36/65 (55%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQH- 71
TC+ G + RN C+ G C +D+ HRNQCQ CRLKKCL +GM ++ Q
Sbjct: 70 TCE-GCKSFFKRSVRRNLSYTCR-GNRDCPIDQHHRNQCQYCRLKKCLKVGMRREAVQRG 127
Query: 72 -LKNS 75
+ NS
Sbjct: 128 RMSNS 132
Score = 107 (42.7 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 17/27 (62%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C +D+ HRNQCQ CRLKKCL +GM ++
Sbjct: 96 CPIDQHHRNQCQYCRLKKCLKVGMRRE 122
>ZFIN|ZDB-GENE-980526-115 [details] [associations]
symbol:nr2f1a "nuclear receptor subfamily 2, group
F, member 1a" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-115 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
HOGENOM:HOG000260820 HOVERGEN:HBG005606 KO:K08547 OrthoDB:EOG4MGS7H
OMA:DKGQGQP EMBL:X70299 EMBL:CR751602 EMBL:BC056574 EMBL:BC066671
EMBL:U93463 IPI:IPI00499015 IPI:IPI00923775 IPI:IPI00923787
PIR:S35333 RefSeq:NP_571255.1 UniGene:Dr.16
ProteinModelPortal:Q06725 SMR:Q06725 Ensembl:ENSDART00000051263
Ensembl:ENSDART00000133384 GeneID:30418 KEGG:dre:30418 CTD:30418
InParanoid:O42536 NextBio:20806824 ArrayExpress:Q06725 Bgee:Q06725
Uniprot:Q06725
Length = 411
Score = 127 (49.8 bits), Expect = 1.8e-07, P = 1.8e-07
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQ 70
TC+ G + RN C+A C +D+ HRNQCQ CRLKKCL +GM ++ Q
Sbjct: 92 TCE-GCKSFFKRSVRRNLTYTCRANRN-CPIDQHHRNQCQYCRLKKCLKVGMRREAVQ 147
Score = 109 (43.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
K S+ T C +D+ HRNQCQ CRLKKCL +GM ++
Sbjct: 101 KRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRRE 144
>UNIPROTKB|F1P101 [details] [associations]
symbol:F1P101 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR001628
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104109 EMBL:AADN02066725 EMBL:AADN02066726
IPI:IPI00576452 Ensembl:ENSGALT00000001533 OMA:GSIRILE
Uniprot:F1P101
Length = 302
Score = 107 (42.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD 67
TC+ G + N +C C++D+ +RN+CQ CRL+KCL +GM++D
Sbjct: 26 TCE-GCKGFFRRSQQNNASYSCSRQRN-CLIDRTNRNRCQHCRLQKCLALGMSRD 78
Score = 107 (42.7 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 16/37 (43%), Positives = 29/37 (78%)
Query: 80 FACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
++C+ + C++D+ +RN+CQ CRL+KCL +GM++D
Sbjct: 44 YSCSR--QRNCLIDRTNRNRCQHCRLQKCLALGMSRD 78
Score = 36 (17.7 bits), Expect = 1.8e-07, Sum P(2) = 1.8e-07
Identities = 7/17 (41%), Positives = 10/17 (58%)
Query: 67 DDAQHLKNSLLYEFACT 83
DD L + LL++F T
Sbjct: 133 DDISTLSDGLLFDFPLT 149
>UNIPROTKB|F2Z3S9 [details] [associations]
symbol:Nr2f1 "Protein Nr2f1" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:621682 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 OMA:DKGQGQP IPI:IPI00554118
ProteinModelPortal:F2Z3S9 SMR:F2Z3S9 Ensembl:ENSRNOT00000020044
Uniprot:F2Z3S9
Length = 420
Score = 127 (49.8 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQ 70
TC+ G + RN C+A C +D+ HRNQCQ CRLKKCL +GM ++ Q
Sbjct: 99 TCE-GCKSFFKRSVRRNLTYTCRANRN-CPIDQHHRNQCQYCRLKKCLKVGMRREAVQ 154
Score = 109 (43.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
K S+ T C +D+ HRNQCQ CRLKKCL +GM ++
Sbjct: 108 KRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRRE 151
>UNIPROTKB|F1RNX7 [details] [associations]
symbol:NR2F1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0001764 "neuron migration"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0001764 GO:GO:0046872 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030900
GO:GO:0000122 GO:GO:0030522 KO:K08547 OMA:DKGQGQP EMBL:CU463069
RefSeq:XP_003354261.1 Ensembl:ENSSSCT00000015465 GeneID:100621341
KEGG:ssc:100621341 Uniprot:F1RNX7
Length = 422
Score = 127 (49.8 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQ 70
TC+ G + RN C+A C +D+ HRNQCQ CRLKKCL +GM ++ Q
Sbjct: 101 TCE-GCKSFFKRSVRRNLTYTCRANRN-CPIDQHHRNQCQYCRLKKCLKVGMRREAVQ 156
Score = 109 (43.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
K S+ T C +D+ HRNQCQ CRLKKCL +GM ++
Sbjct: 110 KRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRRE 153
>MGI|MGI:1352451 [details] [associations]
symbol:Nr2f1 "nuclear receptor subfamily 2, group F, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO;IDA]
[GO:0001764 "neuron migration" evidence=IDA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0007399 "nervous system
development" evidence=ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0010977 "negative regulation of neuron projection
development" evidence=ISO] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IDA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO;IDA] [GO:0044323 "retinoic acid-responsive
element binding" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1352451
GO:GO:0005634 GO:GO:0001764 GO:GO:0046872 eggNOG:NOG327099
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030900
GO:GO:0000122 GO:GO:0030522 CTD:7025 HOGENOM:HOG000260820
HOVERGEN:HBG005606 KO:K08547 ChiTaRS:NR2F1 EMBL:U07625 EMBL:X74134
IPI:IPI00119059 PIR:I48305 RefSeq:NP_034281.2 UniGene:Mm.439653
ProteinModelPortal:Q60632 SMR:Q60632 STRING:Q60632
PhosphoSite:Q60632 PaxDb:Q60632 PRIDE:Q60632 GeneID:13865
KEGG:mmu:13865 InParanoid:Q60632 NextBio:284760 CleanEx:MM_NR2F1
Genevestigator:Q60632 GermOnline:ENSMUSG00000069171 Uniprot:Q60632
Length = 422
Score = 127 (49.8 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQ 70
TC+ G + RN C+A C +D+ HRNQCQ CRLKKCL +GM ++ Q
Sbjct: 101 TCE-GCKSFFKRSVRRNLTYTCRANRN-CPIDQHHRNQCQYCRLKKCLKVGMRREAVQ 156
Score = 109 (43.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
K S+ T C +D+ HRNQCQ CRLKKCL +GM ++
Sbjct: 110 KRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRRE 153
>UNIPROTKB|P10589 [details] [associations]
symbol:NR2F1 "COUP transcription factor 1" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001764 "neuron migration" evidence=IEA] [GO:0030900 "forebrain
development" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0001764
GO:GO:0005654 GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030900 GO:GO:0000122
GO:GO:0003713 GO:GO:0006367 CTD:7025 HOGENOM:HOG000260820
HOVERGEN:HBG005606 KO:K08547 OrthoDB:EOG4MGS7H EMBL:X16155
EMBL:X12795 EMBL:BC004154 EMBL:BC017493 IPI:IPI00021431 PIR:S02710
RefSeq:NP_005645.1 UniGene:Hs.519445 PDB:2EBL PDBsum:2EBL
ProteinModelPortal:P10589 SMR:P10589 DIP:DIP-622N STRING:P10589
PhosphoSite:P10589 DMDM:116959 PaxDb:P10589 PRIDE:P10589 DNASU:7025
Ensembl:ENST00000327111 GeneID:7025 KEGG:hsa:7025 UCSC:uc003kkj.3
GeneCards:GC05P092920 HGNC:HGNC:7975 HPA:CAB019281 MIM:132890
neXtProt:NX_P10589 PharmGKB:PA31758 InParanoid:P10589 OMA:DKGQGQP
PhylomeDB:P10589 ChEMBL:CHEMBL1961789 ChiTaRS:NR2F1
EvolutionaryTrace:P10589 GenomeRNAi:7025 NextBio:27447 Bgee:P10589
CleanEx:HS_NR2F1 Genevestigator:P10589 GermOnline:ENSG00000175745
Uniprot:P10589
Length = 423
Score = 127 (49.8 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQ 70
TC+ G + RN C+A C +D+ HRNQCQ CRLKKCL +GM ++ Q
Sbjct: 102 TCE-GCKSFFKRSVRRNLTYTCRANRN-CPIDQHHRNQCQYCRLKKCLKVGMRREAVQ 157
Score = 109 (43.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
K S+ T C +D+ HRNQCQ CRLKKCL +GM ++
Sbjct: 111 KRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRRE 154
>UNIPROTKB|Q9TTR8 [details] [associations]
symbol:NR2F1 "COUP transcription factor 1" species:9913
"Bos taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 eggNOG:NOG327099 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 EMBL:AJ249440 IPI:IPI00710549
PIR:JH0786 RefSeq:NP_786998.1 UniGene:Bt.543
ProteinModelPortal:Q9TTR8 SMR:Q9TTR8 STRING:Q9TTR8 GeneID:327684
KEGG:bta:327684 CTD:7025 HOGENOM:HOG000260820 HOVERGEN:HBG005606
InParanoid:Q9TTR8 KO:K08547 OrthoDB:EOG4MGS7H NextBio:20810149
Uniprot:Q9TTR8
Length = 424
Score = 127 (49.8 bits), Expect = 1.9e-07, P = 1.9e-07
Identities = 25/58 (43%), Positives = 33/58 (56%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQ 70
TC+ G + RN C+A C +D+ HRNQCQ CRLKKCL +GM ++ Q
Sbjct: 103 TCE-GCKSFFKRSVRRNLTYTCRANRN-CPIDQHHRNQCQYCRLKKCLKVGMRREAVQ 158
Score = 109 (43.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
K S+ T C +D+ HRNQCQ CRLKKCL +GM ++
Sbjct: 112 KRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRRE 155
>WB|WBGene00018430 [details] [associations]
symbol:nhr-142 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0019915 GeneTree:ENSGT00530000064622
HOGENOM:HOG000018997 HSSP:P06536 EMBL:FO080929 RefSeq:NP_504518.3
UniGene:Cel.20490 ProteinModelPortal:Q8MXK0 SMR:Q8MXK0
IntAct:Q8MXK0 STRING:Q8MXK0 EnsemblMetazoa:F44E7.8 GeneID:185740
KEGG:cel:CELE_F44E7.8 UCSC:F44E7.8 CTD:185740 WormBase:F44E7.8a
eggNOG:NOG309373 InParanoid:Q8MXK0 OMA:IIWHIAG NextBio:929342
Uniprot:Q8MXK0
Length = 417
Score = 108 (43.1 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 24/67 (35%), Positives = 35/67 (52%)
Query: 5 HDGMTDHPTCQAGTERCIV-DKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
H G+ C A R +V DK + +C+ + C +DK+ R C+ CR KKCL +G
Sbjct: 37 HFGVLSCRACAAFFRRSVVMDKKY-----SCRKASQGCRIDKSERYLCRLCRYKKCLQLG 91
Query: 64 MNKDDAQ 70
M D+ Q
Sbjct: 92 MTADNVQ 98
Score = 39 (18.8 bits), Expect = 2.1e-07, Sum P(2) = 2.1e-07
Identities = 8/24 (33%), Positives = 12/24 (50%)
Query: 70 QHLKNSLLYEFACTNLVELRCIVD 93
+H KN + F N + L +VD
Sbjct: 182 RHRKNKKMQNFRIINTIRLDQLVD 205
>UNIPROTKB|F1P0B9 [details] [associations]
symbol:F1P0B9 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00700000104390
EMBL:AADN02014532 EMBL:AADN02014533 IPI:IPI00822185
ProteinModelPortal:F1P0B9 Ensembl:ENSGALT00000013876
ArrayExpress:F1P0B9 Uniprot:F1P0B9
Length = 443
Score = 127 (49.8 bits), Expect = 2.1e-07, P = 2.1e-07
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R + +N +C++ CI++K HRN+CQ CRLKKCL MG
Sbjct: 113 RHYGAVSCEGCKGFFKRSV----RKNLTYSCRSNQD-CIINKHHRNRCQFCRLKKCLEMG 167
Query: 64 MNKDDAQ 70
M + Q
Sbjct: 168 MKMESVQ 174
Score = 118 (46.6 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 37/106 (34%), Positives = 54/106 (50%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIV--DKAHRNQCQACRLKKCLNMGMNKDDAQ 70
T A ER ++ KA + Q + C+V DKA A + C G K +
Sbjct: 80 TDSASVER-LLGKADVQRAQVVEY----CVVCGDKASGRHYGAVSCEGC--KGFFK---R 129
Query: 71 HLKNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
++ +L Y +C + + CI++K HRN+CQ CRLKKCL MGM +
Sbjct: 130 SVRKNLTY--SCRSNQD--CIINKHHRNRCQFCRLKKCLEMGMKME 171
>MGI|MGI:1352466 [details] [associations]
symbol:Nr2c2 "nuclear receptor subfamily 2, group C, member
2" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IMP;TAS]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0021549
"cerebellum development" evidence=IMP] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0040019 "positive regulation of
embryonic development" evidence=IMP] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0048520 "positive regulation of behavior" evidence=IMP]
[GO:0051321 "meiotic cell cycle" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 EMBL:U32939 MGI:MGI:1352466 GO:GO:0005634
GO:GO:0030154 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0007283 GO:GO:0006351
GO:GO:0021549 GO:GO:0040019 GO:GO:0051321 GO:GO:0048520
eggNOG:NOG297520 HOVERGEN:HBG008596 HOGENOM:HOG000013058 CTD:7182
KO:K08544 OrthoDB:EOG4Z36D8 ChiTaRS:NR2C2 EMBL:U11688 EMBL:S75970
IPI:IPI00113012 PIR:I54075 PIR:JC4299 RefSeq:NP_035760.1
UniGene:Mm.442385 UniGene:Mm.87062 ProteinModelPortal:P49117
SMR:P49117 STRING:P49117 PhosphoSite:P49117 PRIDE:P49117
Ensembl:ENSMUST00000113460 GeneID:22026 KEGG:mmu:22026
InParanoid:P49117 NextBio:301768 Bgee:P49117 CleanEx:MM_NR2C2
Genevestigator:P49117 GermOnline:ENSMUSG00000005893 Uniprot:P49117
Length = 596
Score = 127 (49.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R + +N +C++ CI++K HRN+CQ CRLKKCL MG
Sbjct: 127 RHYGAVSCEGCKGFFKRSV----RKNLTYSCRSSQD-CIINKHHRNRCQFCRLKKCLEMG 181
Query: 64 MNKDDAQ 70
M + Q
Sbjct: 182 MKMESVQ 188
Score = 116 (45.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 37/106 (34%), Positives = 54/106 (50%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIV--DKAHRNQCQACRLKKCLNMGMNKDDAQ 70
T A ER ++ KA + Q + C+V DKA A + C G K +
Sbjct: 94 TDSASVER-LLGKADVQRPQVVEY----CVVCGDKASGRHYGAVSCEGC--KGFFK---R 143
Query: 71 HLKNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
++ +L Y +C + + CI++K HRN+CQ CRLKKCL MGM +
Sbjct: 144 SVRKNLTY--SCRSSQD--CIINKHHRNRCQFCRLKKCLEMGMKME 185
>RGD|3201 [details] [associations]
symbol:Nr2c2 "nuclear receptor subfamily 2, group C, member 2"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA;ISO] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0021549 "cerebellum development" evidence=ISO] [GO:0030154 "cell
differentiation" evidence=IEA] [GO:0040019 "positive regulation of
embryonic development" evidence=ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA;ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0046982 "protein heterodimerization activity" evidence=ISO]
[GO:0048520 "positive regulation of behavior" evidence=ISO]
[GO:0051321 "meiotic cell cycle" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104
Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:3201 GO:GO:0005634
GO:GO:0030154 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003700 GO:GO:0007283 GO:GO:0006351 GO:GO:0021549 GO:GO:0040019
GO:GO:0051321 GO:GO:0048520 eggNOG:NOG297520 HOVERGEN:HBG008596
HOGENOM:HOG000013058 CTD:7182 KO:K08544 OrthoDB:EOG4Z36D8 EMBL:L27513
IPI:IPI00213603 PIR:I80177 RefSeq:NP_059019.1 UniGene:Rn.10485
ProteinModelPortal:P55094 SMR:P55094 STRING:P55094 PhosphoSite:P55094
PRIDE:P55094 GeneID:50659 KEGG:rno:50659 UCSC:RGD:3201
InParanoid:P55094 NextBio:610474 ArrayExpress:P55094
Genevestigator:P55094 GermOnline:ENSRNOG00000010536 Uniprot:P55094
Length = 596
Score = 127 (49.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R + +N +C++ CI++K HRN+CQ CRLKKCL MG
Sbjct: 127 RHYGAVSCEGCKGFFKRSV----RKNLTYSCRSSQD-CIINKHHRNRCQFCRLKKCLEMG 181
Query: 64 MNKDDAQ 70
M + Q
Sbjct: 182 MKMESVQ 188
Score = 116 (45.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 37/106 (34%), Positives = 54/106 (50%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIV--DKAHRNQCQACRLKKCLNMGMNKDDAQ 70
T A ER ++ KA + Q + C+V DKA A + C G K +
Sbjct: 94 TDSASVER-LLGKADVQRPQVVEY----CVVCGDKASGRHYGAVSCEGC--KGFFK---R 143
Query: 71 HLKNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
++ +L Y +C + + CI++K HRN+CQ CRLKKCL MGM +
Sbjct: 144 SVRKNLTY--SCRSSQD--CIINKHHRNRCQFCRLKKCLEMGMKME 185
>UNIPROTKB|G3V7F5 [details] [associations]
symbol:Nr2c2 "RCG56527, isoform CRA_c" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0021549
"cerebellum development" evidence=IEA] [GO:0040019 "positive
regulation of embryonic development" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0046982 "protein heterodimerization activity"
evidence=IEA] [GO:0048520 "positive regulation of behavior"
evidence=IEA] [GO:0051321 "meiotic cell cycle" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3201 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
EMBL:CH473957 GeneTree:ENSGT00700000104390 OMA:KADVQRP
Ensembl:ENSRNOT00000014353 Uniprot:G3V7F5
Length = 596
Score = 127 (49.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R + +N +C++ CI++K HRN+CQ CRLKKCL MG
Sbjct: 127 RHYGAVSCEGCKGFFKRSV----RKNLTYSCRSSQD-CIINKHHRNRCQFCRLKKCLEMG 181
Query: 64 MNKDDAQ 70
M + Q
Sbjct: 182 MKMESVQ 188
Score = 116 (45.9 bits), Expect = 4.9e-06, P = 4.9e-06
Identities = 37/106 (34%), Positives = 54/106 (50%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIV--DKAHRNQCQACRLKKCLNMGMNKDDAQ 70
T A ER ++ KA + Q + C+V DKA A + C G K +
Sbjct: 94 TDSASVER-LLGKADVQRPQVVEY----CVVCGDKASGRHYGAVSCEGC--KGFFK---R 143
Query: 71 HLKNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
++ +L Y +C + + CI++K HRN+CQ CRLKKCL MGM +
Sbjct: 144 SVRKNLTY--SCRSSQD--CIINKHHRNRCQFCRLKKCLEMGMKME 185
>UNIPROTKB|F1SPJ9 [details] [associations]
symbol:NR2C2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0051321 "meiotic cell cycle" evidence=IEA] [GO:0048520
"positive regulation of behavior" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0040019 "positive regulation of embryonic
development" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700 GO:GO:0007283
GO:GO:0006351 GO:GO:0021549 GO:GO:0040019 GO:GO:0051321
GO:GO:0048520 GeneTree:ENSGT00700000104390 CTD:7182 KO:K08544
OMA:KADVQRP EMBL:CU856531 EMBL:CU469370 RefSeq:XP_003132435.3
Ensembl:ENSSSCT00000012690 GeneID:100513111 KEGG:ssc:100513111
Uniprot:F1SPJ9
Length = 596
Score = 127 (49.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R + +N +C++ CI++K HRN+CQ CRLKKCL MG
Sbjct: 127 RHYGAVSCEGCKGFFKRSV----RKNLTYSCRSNQD-CIINKHHRNRCQFCRLKKCLEMG 181
Query: 64 MNKDDAQ 70
M + Q
Sbjct: 182 MKMESVQ 188
Score = 115 (45.5 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 37/106 (34%), Positives = 54/106 (50%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIV--DKAHRNQCQACRLKKCLNMGMNKDDAQ 70
T A ER ++ KA + Q + C+V DKA A + C G K +
Sbjct: 94 TDSASVER-LLGKADVQRPQVVEY----CVVCGDKASGRHYGAVSCEGC--KGFFK---R 143
Query: 71 HLKNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
++ +L Y +C + + CI++K HRN+CQ CRLKKCL MGM +
Sbjct: 144 SVRKNLTY--SCRSNQD--CIINKHHRNRCQFCRLKKCLEMGMKME 185
>UNIPROTKB|P49116 [details] [associations]
symbol:NR2C2 "Nuclear receptor subfamily 2 group C member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030154 "cell differentiation" evidence=IEA]
[GO:0007283 "spermatogenesis" evidence=IEA] [GO:0021549 "cerebellum
development" evidence=IEA] [GO:0040019 "positive regulation of
embryonic development" evidence=IEA] [GO:0048520 "positive
regulation of behavior" evidence=IEA] [GO:0051321 "meiotic cell
cycle" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0046982 "protein heterodimerization activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=TAS]
[GO:0004872 "receptor activity" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0007399 "nervous system development" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0007399 GO:GO:0005654
GO:GO:0030154 EMBL:CH471055 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0004872 GO:GO:0003700
GO:GO:0007283 GO:GO:0003713 GO:GO:0021549 GO:GO:0046982
GO:GO:0040019 Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
GO:GO:0051321 GO:GO:0048520 EMBL:AC090954 eggNOG:NOG297520
HOVERGEN:HBG008596 HOGENOM:HOG000013058 EMBL:U10990 EMBL:L27586
EMBL:AB307708 EMBL:AK290590 EMBL:AC090937 IPI:IPI00332451
IPI:IPI00749258 PIR:A57031 PIR:I59309 RefSeq:NP_003289.2
UniGene:Hs.555973 PDB:3P0U PDBsum:3P0U ProteinModelPortal:P49116
SMR:P49116 DIP:DIP-5999N IntAct:P49116 STRING:P49116
PhosphoSite:P49116 DMDM:1351190 PaxDb:P49116 PRIDE:P49116
DNASU:7182 Ensembl:ENST00000323373 Ensembl:ENST00000393102
Ensembl:ENST00000406272 Ensembl:ENST00000425241 GeneID:7182
KEGG:hsa:7182 UCSC:uc003bzj.4 CTD:7182 GeneCards:GC03P014989
HGNC:HGNC:7972 HPA:HPA006313 MIM:601426 neXtProt:NX_P49116
PharmGKB:PA31755 KO:K08544 OMA:KADVQRP OrthoDB:EOG4Z36D8
BindingDB:P49116 ChEMBL:CHEMBL5716 ChiTaRS:NR2C2
EvolutionaryTrace:P49116 GenomeRNAi:7182 NextBio:28158
ArrayExpress:P49116 Bgee:P49116 CleanEx:HS_NR2C2
Genevestigator:P49116 GermOnline:ENSG00000177463 Uniprot:P49116
Length = 596
Score = 127 (49.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R + +N +C++ CI++K HRN+CQ CRLKKCL MG
Sbjct: 127 RHYGAVSCEGCKGFFKRSV----RKNLTYSCRSNQD-CIINKHHRNRCQFCRLKKCLEMG 181
Query: 64 MNKDDAQ 70
M + Q
Sbjct: 182 MKMESVQ 188
Score = 114 (45.2 bits), Expect = 8.1e-06, P = 8.1e-06
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 41 CIV--DKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRN 98
C+V DKA A + C G K + ++ +L Y +C + + CI++K HRN
Sbjct: 117 CVVCGDKASGRHYGAVSCEGC--KGFFK---RSVRKNLTY--SCRSNQD--CIINKHHRN 167
Query: 99 QCQACRLKKCLNMGMNKD 116
+CQ CRLKKCL MGM +
Sbjct: 168 RCQFCRLKKCLEMGMKME 185
>UNIPROTKB|F1P0D1 [details] [associations]
symbol:F1P0D1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0021549 "cerebellum development" evidence=IEA]
[GO:0040019 "positive regulation of embryonic development"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=IEA] [GO:0048520 "positive
regulation of behavior" evidence=IEA] [GO:0051321 "meiotic cell
cycle" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0030522 GO:GO:0040019 GO:GO:0051321 GO:GO:0048520
GeneTree:ENSGT00700000104390 OMA:KADVQRP EMBL:AADN02014532
EMBL:AADN02014533 IPI:IPI00577280 Ensembl:ENSGALT00000013874
ArrayExpress:F1P0D1 Uniprot:F1P0D1
Length = 600
Score = 127 (49.8 bits), Expect = 3.3e-07, P = 3.3e-07
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R + +N +C++ CI++K HRN+CQ CRLKKCL MG
Sbjct: 131 RHYGAVSCEGCKGFFKRSV----RKNLTYSCRSNQD-CIINKHHRNRCQFCRLKKCLEMG 185
Query: 64 MNKDDAQ 70
M + Q
Sbjct: 186 MKMESVQ 192
Score = 118 (46.6 bits), Expect = 3.0e-06, P = 3.0e-06
Identities = 37/106 (34%), Positives = 54/106 (50%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIV--DKAHRNQCQACRLKKCLNMGMNKDDAQ 70
T A ER ++ KA + Q + C+V DKA A + C G K +
Sbjct: 98 TDSASVER-LLGKADVQRAQVVEY----CVVCGDKASGRHYGAVSCEGC--KGFFK---R 147
Query: 71 HLKNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
++ +L Y +C + + CI++K HRN+CQ CRLKKCL MGM +
Sbjct: 148 SVRKNLTY--SCRSNQD--CIINKHHRNRCQFCRLKKCLEMGMKME 189
>WB|WBGene00003622 [details] [associations]
symbol:nhr-23 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] [GO:0040011 "locomotion" evidence=IMP] [GO:0040007
"growth" evidence=IMP] [GO:0018996 "molting cycle, collagen and
cuticulin-based cuticle" evidence=IMP] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IMP]
[GO:0018991 "oviposition" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0043652 "engulfment of apoptotic cell"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0008406 "gonad development"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0009792 GO:GO:0040007 GO:GO:0018991
GO:GO:0040010 GO:GO:0008406 GO:GO:0002119 GO:GO:0046872
GO:GO:0018996 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0010171
GO:GO:0040011 GO:GO:0040018 GO:GO:0003700 GO:GO:0006351
GO:GO:0043652 KO:K08701 eggNOG:NOG324222
GeneTree:ENSGT00700000104109 EMBL:U13075 EMBL:U51231 EMBL:U51136
EMBL:AF332203 EMBL:AF332202 EMBL:Z71258 PIR:T18848
RefSeq:NP_001020975.1 RefSeq:NP_001020976.1 RefSeq:NP_001020977.1
RefSeq:NP_001032969.1 RefSeq:NP_001032970.1 RefSeq:NP_001032971.1
UniGene:Cel.19389 ProteinModelPortal:P41828 SMR:P41828
IntAct:P41828 STRING:P41828 EnsemblMetazoa:C01H6.5a GeneID:172460
KEGG:cel:CELE_C01H6.5 UCSC:C01H6.5c CTD:172460 WormBase:C01H6.5a
WormBase:C01H6.5b WormBase:C01H6.5c WormBase:C01H6.5d
WormBase:C01H6.5e WormBase:C01H6.5f InParanoid:P41828 OMA:FAAMYYN
NextBio:875597 Uniprot:P41828
Length = 588
Score = 112 (44.5 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 18/42 (42%), Positives = 29/42 (69%)
Query: 75 SLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
S + + C + C+VD+ +RN+CQ CRLKKC+ +GM++D
Sbjct: 192 SSIVNYQCPR--QKNCVVDRVNRNRCQYCRLKKCIELGMSRD 231
Score = 110 (43.8 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 16/27 (59%), Positives = 24/27 (88%)
Query: 41 CIVDKAHRNQCQACRLKKCLNMGMNKD 67
C+VD+ +RN+CQ CRLKKC+ +GM++D
Sbjct: 205 CVVDRVNRNRCQYCRLKKCIELGMSRD 231
Score = 39 (18.8 bits), Expect = 3.3e-07, Sum P(2) = 3.3e-07
Identities = 12/39 (30%), Positives = 21/39 (53%)
Query: 69 AQHLKNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKK 107
A+ LKN+L Y+ + + C+ D HR Q R+++
Sbjct: 518 AETLKNAL-YQSV---MPRIGCMEDTIHRIQDVETRIRQ 552
>UNIPROTKB|E1B9Y6 [details] [associations]
symbol:NR2C2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0051321 "meiotic cell cycle" evidence=IEA] [GO:0048520
"positive regulation of behavior" evidence=IEA] [GO:0046982
"protein heterodimerization activity" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0040019 "positive regulation of embryonic
development" evidence=IEA] [GO:0021549 "cerebellum development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0007283 GO:GO:0021549 GO:GO:0030522 GO:GO:0040019
GO:GO:0051321 GO:GO:0048520 GeneTree:ENSGT00700000104390 CTD:7182
KO:K08544 OMA:KADVQRP EMBL:DAAA02054598 IPI:IPI00714058
RefSeq:NP_001178990.1 UniGene:Bt.57739 PRIDE:E1B9Y6
Ensembl:ENSBTAT00000018228 GeneID:505531 KEGG:bta:505531
NextBio:20867182 Uniprot:E1B9Y6
Length = 611
Score = 127 (49.8 bits), Expect = 3.4e-07, P = 3.4e-07
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R + +N +C++ CI++K HRN+CQ CRLKKCL MG
Sbjct: 142 RHYGAVSCEGCKGFFKRSV----RKNLTYSCRSSQD-CIINKHHRNRCQFCRLKKCLEMG 196
Query: 64 MNKDDAQ 70
M + Q
Sbjct: 197 MKMESVQ 203
Score = 115 (45.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 41 CIV--DKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRN 98
C+V DKA A + C G K + ++ +L Y +C + + CI++K HRN
Sbjct: 132 CVVCGDKASGRHYGAVSCEGC--KGFFK---RSVRKNLTY--SCRSSQD--CIINKHHRN 182
Query: 99 QCQACRLKKCLNMGMNKD 116
+CQ CRLKKCL MGM +
Sbjct: 183 RCQFCRLKKCLEMGMKME 200
>UNIPROTKB|E2RI85 [details] [associations]
symbol:NR2C2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0051321 "meiotic cell cycle" evidence=IEA]
[GO:0048520 "positive regulation of behavior" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0040019 "positive
regulation of embryonic development" evidence=IEA] [GO:0021549
"cerebellum development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0007283 GO:GO:0006351 GO:GO:0021549 GO:GO:0040019
GO:GO:0051321 GO:GO:0048520 GeneTree:ENSGT00700000104390
OMA:KADVQRP EMBL:AAEX03012056 Ensembl:ENSCAFT00000007359
NextBio:20858740 Uniprot:E2RI85
Length = 629
Score = 127 (49.8 bits), Expect = 3.5e-07, P = 3.5e-07
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R + +N +C++ CI++K HRN+CQ CRLKKCL MG
Sbjct: 160 RHYGAVSCEGCKGFFKRSV----RKNLTYSCRSNQD-CIINKHHRNRCQFCRLKKCLEMG 214
Query: 64 MNKDDAQ 70
M + Q
Sbjct: 215 MKMESVQ 221
Score = 115 (45.5 bits), Expect = 6.8e-06, P = 6.8e-06
Identities = 37/106 (34%), Positives = 54/106 (50%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIV--DKAHRNQCQACRLKKCLNMGMNKDDAQ 70
T A ER ++ KA + Q + C+V DKA A + C G K +
Sbjct: 127 TDSASVER-LLGKADVQRPQVVEY----CVVCGDKASGRHYGAVSCEGC--KGFFK---R 176
Query: 71 HLKNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
++ +L Y +C + + CI++K HRN+CQ CRLKKCL MGM +
Sbjct: 177 SVRKNLTY--SCRSNQD--CIINKHHRNRCQFCRLKKCLEMGMKME 218
>UNIPROTKB|F1PX81 [details] [associations]
symbol:NR2F2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522 OMA:GPPNNTQ
EMBL:AAEX03002267 Ensembl:ENSCAFT00000017350 Uniprot:F1PX81
Length = 420
Score = 124 (48.7 bits), Expect = 4.0e-07, P = 4.0e-07
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD 67
TC+ G + RN C+A C +D+ HRNQCQ CRLKKCL +GM ++
Sbjct: 95 TCE-GCKSFFKRSVRRNLSYTCRANRN-CPIDQHHRNQCQYCRLKKCLKVGMRRE 147
Score = 110 (43.8 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 20/44 (45%), Positives = 27/44 (61%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
K S+ + T C +D+ HRNQCQ CRLKKCL +GM ++
Sbjct: 104 KRSVRRNLSYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRRE 147
>ZFIN|ZDB-GENE-990415-252 [details] [associations]
symbol:nr2f2 "nuclear receptor subfamily 2, group
F, member 2" species:7955 "Danio rerio" [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0060838 "lymphatic endothelial
cell fate commitment" evidence=IMP] [GO:0001946 "lymphangiogenesis"
evidence=IMP] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-990415-252 GO:GO:0005634 GO:GO:0046872
eggNOG:NOG327099 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0001946 GO:GO:0030522
HOGENOM:HOG000260820 HOVERGEN:HBG005606 OrthoDB:EOG4MGS7H
OMA:GPPNNTQ EMBL:BX569787 EMBL:BX936364 EMBL:BC162484
IPI:IPI00508689 UniGene:Dr.77152 STRING:B3DGQ7
Ensembl:ENSDART00000059976 GO:GO:0060838 Uniprot:B3DGQ7
Length = 428
Score = 124 (48.7 bits), Expect = 4.2e-07, P = 4.2e-07
Identities = 24/55 (43%), Positives = 32/55 (58%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD 67
TC+ G + RN C+A C +D+ HRNQCQ CRLKKCL +GM ++
Sbjct: 103 TCE-GCKSFFKRSVRRNLTYTCRANRN-CPIDQHHRNQCQYCRLKKCLKVGMRRE 155
Score = 109 (43.4 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 20/44 (45%), Positives = 26/44 (59%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
K S+ T C +D+ HRNQCQ CRLKKCL +GM ++
Sbjct: 112 KRSVRRNLTYTCRANRNCPIDQHHRNQCQYCRLKKCLKVGMRRE 155
>UNIPROTKB|E9PSV4 [details] [associations]
symbol:Hnf4a "Hepatocyte nuclear factor 4-alpha"
species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:2810 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
IPI:IPI01007598 Ensembl:ENSRNOT00000067429 ArrayExpress:E9PSV4
Uniprot:E9PSV4
Length = 351
Score = 122 (48.0 bits), Expect = 4.8e-07, P = 4.8e-07
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 2 TFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLN 61
T +H G + C+ G R V K H C+ + +C+VDK RNQC+ CRLKKC
Sbjct: 43 TGKHYGASSCDGCK-GFFRRSVRKNHMYSCRFSR----QCVVDKDKRNQCRYCRLKKCFR 97
Query: 62 MGMNKDDAQHLKNSL 76
GM K+ Q+ ++ +
Sbjct: 98 AGMKKEAVQNERDRI 112
Score = 103 (41.3 bits), Expect = 5.7e-05, P = 5.7e-05
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+C+VDK RNQC+ CRLKKC GM K+
Sbjct: 76 QCVVDKDKRNQCRYCRLKKCFRAGMKKE 103
>MGI|MGI:1352453 [details] [associations]
symbol:Nr2f6 "nuclear receptor subfamily 2, group F, member
6" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043153 "entrainment of circadian clock
by photoperiod" evidence=IMP] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0048666 "neuron development" evidence=IMP]
[GO:0050965 "detection of temperature stimulus involved in sensory
perception of pain" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1352453
GO:GO:0005634 GO:GO:0046872 GeneTree:ENSGT00670000097509
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965
GO:GO:0000122 GO:GO:0048666 GO:GO:0030522 EMBL:CH466569
GO:GO:0043153 HOGENOM:HOG000260820 HOVERGEN:HBG005606 HSSP:P03372
CTD:2063 eggNOG:NOG277317 KO:K08549 OMA:DPNGGTN OrthoDB:EOG4FN4HT
EMBL:X76654 EMBL:L25674 EMBL:AK131941 EMBL:AK171552 EMBL:BC008138
IPI:IPI00117237 PIR:I48734 PIR:I49640 RefSeq:NP_034280.2
UniGene:Mm.28989 ProteinModelPortal:P43136 SMR:P43136 IntAct:P43136
STRING:P43136 PhosphoSite:P43136 PaxDb:P43136 PRIDE:P43136
Ensembl:ENSMUST00000002466 GeneID:13864 KEGG:mmu:13864
InParanoid:Q922G8 NextBio:284756 Bgee:P43136 CleanEx:MM_NR2F6
Genevestigator:P43136 GermOnline:ENSMUSG00000002393 Uniprot:P43136
Length = 390
Score = 122 (48.0 bits), Expect = 5.8e-07, P = 5.8e-07
Identities = 27/73 (36%), Positives = 39/73 (53%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQH- 71
TC+ G + RN C++ C +D+ HRNQCQ CRLKKC +GM K+ Q
Sbjct: 73 TCE-GCKSFFKRSIRRNLSYTCRSNRD-CQIDQHHRNQCQYCRLKKCFRVGMRKEAVQRG 130
Query: 72 -LKNSLLYEFACT 83
+ ++L AC+
Sbjct: 131 RIPHALPGPAACS 143
Score = 106 (42.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C +D+ HRNQCQ CRLKKC +GM K+
Sbjct: 99 CQIDQHHRNQCQYCRLKKCFRVGMRKE 125
>RGD|621682 [details] [associations]
symbol:Nr2f1 "nuclear receptor subfamily 2, group F, member 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0001764 "neuron migration" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0005634 "nucleus" evidence=ISO] [GO:0007399
"nervous system development" evidence=IDA] [GO:0010977 "negative
regulation of neuron projection development" evidence=IMP]
[GO:0030900 "forebrain development" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00105 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS51030
SMART:SM00399 RGD:621682 GO:GO:0005634 GO:GO:0001764 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0030900 GO:GO:0000122 GO:GO:0030522 GO:GO:0010977
GO:GO:0044323 HSSP:P20393 IPI:IPI00554118 EMBL:U15002
UniGene:Rn.89710 ProteinModelPortal:Q78E88 STRING:Q78E88
UCSC:RGD:621682 InParanoid:Q78E88 Genevestigator:Q78E88
Uniprot:Q78E88
Length = 129
Score = 114 (45.2 bits), Expect = 6.1e-07, P = 6.1e-07
Identities = 20/37 (54%), Positives = 26/37 (70%)
Query: 34 CQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQ 70
C+A C +D+ HRNQCQ CRLKKCL +GM ++ Q
Sbjct: 5 CRANRN-CPIDQHHRNQCQYCRLKKCLKVGMRREAVQ 40
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 17/27 (62%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C +D+ HRNQCQ CRLKKCL +GM ++
Sbjct: 11 CPIDQHHRNQCQYCRLKKCLKVGMRRE 37
>UNIPROTKB|F1NW94 [details] [associations]
symbol:NR2C1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 GeneTree:ENSGT00700000104390 EMBL:AADN02005941
EMBL:AADN02005942 EMBL:AADN02005943 IPI:IPI00586813
Ensembl:ENSGALT00000018481 ArrayExpress:F1NW94 Uniprot:F1NW94
Length = 562
Score = 124 (48.7 bits), Expect = 6.3e-07, P = 6.3e-07
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R I +N +C+ GT C+++K HRN+CQ CRL++C+ G
Sbjct: 83 RHYGAVTCEGCKGFFKRSI----RKNLVYSCR-GTKDCVINKHHRNRCQYCRLQRCIAFG 137
Query: 64 MNKDDAQ 70
M +D Q
Sbjct: 138 MKQDSVQ 144
Score = 107 (42.7 bits), Expect = 4.2e-05, P = 4.2e-05
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 41 CIV--DKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRN 98
C+V DKA A + C G K + ++ +L+Y +C + C+++K HRN
Sbjct: 73 CVVCGDKASGRHYGAVTCEGC--KGFFK---RSIRKNLVY--SCRGTKD--CVINKHHRN 123
Query: 99 QCQACRLKKCLNMGMNKD 116
+CQ CRL++C+ GM +D
Sbjct: 124 RCQYCRLQRCIAFGMKQD 141
>WB|WBGene00006790 [details] [associations]
symbol:unc-55 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0040011
"locomotion" evidence=IMP] [GO:0010171 "body morphogenesis"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0010171 GO:GO:0040011 GO:GO:0030522
OMA:MENIRIF EMBL:Z75542 EMBL:EF601082 RefSeq:NP_001122482.2
UniGene:Cel.28878 ProteinModelPortal:G5ECR9 SMR:G5ECR9
EnsemblMetazoa:F55D12.4a GeneID:192082 KEGG:cel:CELE_F55D12.4
CTD:192082 WormBase:F55D12.4a Uniprot:G5ECR9
Length = 370
Score = 121 (47.7 bits), Expect = 6.8e-07, P = 6.8e-07
Identities = 26/64 (40%), Positives = 35/64 (54%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
+H G C++ +R I R+ C+A T C +D HRNQCQ CRL KC+ MG
Sbjct: 31 KHYGQFSCEGCKSFFKRSI----RRSLSYTCRA-TKNCAIDVQHRNQCQYCRLTKCIRMG 85
Query: 64 MNKD 67
M K+
Sbjct: 86 MRKE 89
Score = 117 (46.2 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 21/46 (45%), Positives = 27/46 (58%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKDGK 118
K S+ + T C +D HRNQCQ CRL KC+ MGM K+G+
Sbjct: 46 KRSIRRSLSYTCRATKNCAIDVQHRNQCQYCRLTKCIRMGMRKEGR 91
>UNIPROTKB|E2QSI1 [details] [associations]
symbol:ESR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0030284 "estrogen
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001292
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105
Pfam:PF02159 PIRSF:PIRSF002527 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00543 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0030284
InterPro:IPR024736 Pfam:PF12743 Ensembl:ENSCAFT00000000680
Uniprot:E2QSI1
Length = 495
Score = 108 (43.1 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 94 HYGVWSCEGCKAFFKRSI--QGHNDYM--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 148
Query: 65 NK 66
K
Sbjct: 149 MK 150
Score = 97 (39.2 bits), Expect = 0.00042, P = 0.00042
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 124 QCTIDKNRRKSCQACRLRKCYEVGMMKGG 152
Score = 36 (17.7 bits), Expect = 6.9e-07, Sum P(2) = 6.9e-07
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 70 QHLKNS---LLYEFACTNLVELRCIVDK---AHRNQCQACR 104
+H+ N LY C N+V L ++ + AHR A R
Sbjct: 415 RHMSNKGMEHLYNMKCKNVVPLYDLLLEMLDAHRLHAPASR 455
>MGI|MGI:1352467 [details] [associations]
symbol:Esr1 "estrogen receptor 1 (alpha)" species:10090 "Mus
musculus" [GO:0001046 "core promoter sequence-specific DNA binding"
evidence=ISO] [GO:0001547 "antral ovarian follicle growth"
evidence=IMP] [GO:0002064 "epithelial cell development"
evidence=IMP] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=ISO]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IDA]
[GO:0005496 "steroid binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005737 "cytoplasm" evidence=ISO;IDA] [GO:0005794 "Golgi
apparatus" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0008013 "beta-catenin binding"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=IPI] [GO:0008209 "androgen metabolic process"
evidence=IMP] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008289 "lipid binding" evidence=IEA] [GO:0008584 "male gonad
development" evidence=IMP] [GO:0010629 "negative regulation of gene
expression" evidence=ISO] [GO:0016020 "membrane" evidence=IEA]
[GO:0016049 "cell growth" evidence=NAS] [GO:0019899 "enzyme
binding" evidence=ISO] [GO:0030284 "estrogen receptor activity"
evidence=ISO] [GO:0030315 "T-tubule" evidence=ISO] [GO:0030518
"intracellular steroid hormone receptor signaling pathway"
evidence=ISO] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IDA] [GO:0031798 "type 1 metabotropic
glutamate receptor binding" evidence=ISO] [GO:0032355 "response to
estradiol stimulus" evidence=ISO] [GO:0032403 "protein complex
binding" evidence=ISO] [GO:0034056 "estrogen response element
binding" evidence=ISO] [GO:0038052 "estrogen-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISO] [GO:0042562 "hormone binding"
evidence=ISO] [GO:0042802 "identical protein binding" evidence=ISO]
[GO:0042981 "regulation of apoptotic process" evidence=IMP]
[GO:0043005 "neuron projection" evidence=ISO] [GO:0043124 "negative
regulation of I-kappaB kinase/NF-kappaB cascade" evidence=ISO]
[GO:0043195 "terminal bouton" evidence=ISO] [GO:0043204
"perikaryon" evidence=ISO] [GO:0043234 "protein complex"
evidence=ISO] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0043523 "regulation of neuron apoptotic process"
evidence=ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=ISO] [GO:0044429 "mitochondrial part" evidence=ISO]
[GO:0045429 "positive regulation of nitric oxide biosynthetic
process" evidence=ISO] [GO:0045742 "positive regulation of
epidermal growth factor receptor signaling pathway" evidence=ISO]
[GO:0045839 "negative regulation of mitosis" evidence=NAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO;IMP] [GO:0046872 "metal ion
binding" evidence=IEA] [GO:0048146 "positive regulation of
fibroblast proliferation" evidence=IMP] [GO:0048386 "positive
regulation of retinoic acid receptor signaling pathway"
evidence=ISO] [GO:0048471 "perinuclear region of cytoplasm"
evidence=ISO] [GO:0051000 "positive regulation of nitric-oxide
synthase activity" evidence=ISO] [GO:0051091 "positive regulation
of sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060011 "Sertoli cell proliferation"
evidence=ISO] [GO:0060065 "uterus development" evidence=IGI]
[GO:0060068 "vagina development" evidence=IGI] [GO:0060523
"prostate epithelial cord elongation" evidence=IMP] [GO:0060527
"prostate epithelial cord arborization involved in prostate
glandular acinus morphogenesis" evidence=IMP] [GO:0060687
"regulation of branching involved in prostate gland morphogenesis"
evidence=IMP] [GO:0060745 "mammary gland branching involved in
pregnancy" evidence=IMP] [GO:0060749 "mammary gland alveolus
development" evidence=IMP] [GO:0060750 "epithelial cell
proliferation involved in mammary gland duct elongation"
evidence=IMP] [GO:0070374 "positive regulation of ERK1 and ERK2
cascade" evidence=ISO] [GO:0071391 "cellular response to estrogen
stimulus" evidence=IMP] [GO:1901215 "negative regulation of neuron
death" evidence=ISO] InterPro:IPR000536 InterPro:IPR001292
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105
Pfam:PF02159 PIRSF:PIRSF002527 PIRSF:PIRSF500101 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00543 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:1352467 GO:GO:0005634
GO:GO:0005794 GO:GO:0005737 GO:GO:0048471 GO:GO:0043234
GO:GO:0051091 GO:GO:0042981 GO:GO:0005496 GO:GO:0032355
GO:GO:0046872 GO:GO:0016049 GO:GO:0051000 GO:GO:0043204
GO:GO:0004879 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0070374 GO:GO:0045944 GO:GO:0042562
GO:GO:0043195 GO:GO:0003682 GO:GO:0030315 GO:GO:0008584
GO:GO:0002076 GO:GO:0043124 GO:GO:0008209 GO:GO:0010629
GO:GO:0043433 GO:GO:0045742 GO:GO:0060749 GO:GO:0045429
GO:GO:0045839 GO:GO:0048146 GO:GO:0048386
GeneTree:ENSGT00700000104072 GO:GO:0060750 GO:GO:0060011
GO:GO:0002064 GO:GO:0060068 GO:GO:0001046 GO:GO:0071391
GO:GO:0060687 GO:GO:0001547 HOVERGEN:HBG108344 CTD:2099
eggNOG:NOG320746 HOGENOM:HOG000233468 KO:K08550 OrthoDB:EOG4JM7PP
InterPro:IPR024736 Pfam:PF12743 GO:GO:0044429 GO:GO:0034056
GO:GO:0038052 GO:GO:0060745 GO:GO:0060527 GO:GO:0060523
GO:GO:0060065 EMBL:M38651 EMBL:AK036627 EMBL:AK041525 EMBL:AJ276597
EMBL:AF128221 EMBL:AF128220 IPI:IPI00117980 PIR:A40061
RefSeq:NP_031982.1 UniGene:Mm.463262 UniGene:Mm.489063
UniGene:Mm.9213 ProteinModelPortal:P19785 SMR:P19785 IntAct:P19785
MINT:MINT-2835181 STRING:P19785 GlycoSuiteDB:P19785
PhosphoSite:P19785 PRIDE:P19785 DNASU:13982
Ensembl:ENSMUST00000067086 Ensembl:ENSMUST00000105589
Ensembl:ENSMUST00000105590 GeneID:13982 KEGG:mmu:13982
UCSC:uc007egu.2 InParanoid:P19785 OMA:YRPSSDN BindingDB:P19785
ChEMBL:CHEMBL3065 NextBio:284854 Bgee:P19785 CleanEx:MM_ESR1
Genevestigator:P19785 GermOnline:ENSMUSG00000019768 Uniprot:P19785
Length = 599
Score = 108 (43.1 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 200 HYGVWSCEGCKAFFKRSI--QGHNDYM--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 254
Query: 65 NK 66
K
Sbjct: 255 MK 256
Score = 97 (39.2 bits), Expect = 0.00054, P = 0.00054
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 230 QCTIDKNRRKSCQACRLRKCYEVGMMKGG 258
Score = 38 (18.4 bits), Expect = 7.1e-07, Sum P(2) = 7.1e-07
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 70 QHLKNS---LLYEFACTNLVELRCIVDK---AHRNQCQACRL 105
+H+ N LY C N+V L ++ + AHR A R+
Sbjct: 519 RHMSNKGMEHLYNMKCKNVVPLYDLLLEMLDAHRLHAPASRM 560
>RGD|2581 [details] [associations]
symbol:Esr1 "estrogen receptor 1" species:10116 "Rattus norvegicus"
[GO:0001046 "core promoter sequence-specific DNA binding"
evidence=ISO] [GO:0001547 "antral ovarian follicle growth"
evidence=ISO] [GO:0002064 "epithelial cell development" evidence=ISO]
[GO:0002076 "osteoblast development" evidence=IEP] [GO:0003677 "DNA
binding" evidence=IMP] [GO:0003682 "chromatin binding" evidence=ISO]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IDA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription factor
activity" evidence=ISO] [GO:0005496 "steroid binding" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005886 "plasma
membrane" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0008013 "beta-catenin
binding" evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008209 "androgen metabolic process" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008584 "male gonad
development" evidence=ISO] [GO:0010629 "negative regulation of gene
expression" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=ISO;IPI] [GO:0030284 "estrogen receptor activity"
evidence=IDA;TAS] [GO:0030315 "T-tubule" evidence=IDA] [GO:0030518
"intracellular steroid hormone receptor signaling pathway"
evidence=IDA] [GO:0030522 "intracellular receptor mediated signaling
pathway" evidence=ISO] [GO:0031798 "type 1 metabotropic glutamate
receptor binding" evidence=IPI] [GO:0032355 "response to estradiol
stimulus" evidence=IEP;ISO] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0034056 "estrogen response element binding"
evidence=ISO] [GO:0038052 "estrogen-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISO] [GO:0042562 "hormone binding" evidence=IDA;IMP]
[GO:0042802 "identical protein binding" evidence=ISO] [GO:0042981
"regulation of apoptotic process" evidence=ISO] [GO:0043005 "neuron
projection" evidence=IDA] [GO:0043124 "negative regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=ISO;ISS] [GO:0043195
"terminal bouton" evidence=IDA] [GO:0043204 "perikaryon"
evidence=IDA] [GO:0043234 "protein complex" evidence=IDA] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO;ISS] [GO:0043523 "regulation of neuron
apoptotic process" evidence=IDA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043627 "response to estrogen stimulus"
evidence=ISO] [GO:0044429 "mitochondrial part" evidence=IDA]
[GO:0045429 "positive regulation of nitric oxide biosynthetic
process" evidence=ISO;ISS] [GO:0045742 "positive regulation of
epidermal growth factor receptor signaling pathway" evidence=IMP]
[GO:0045944 "positive regulation of transcription from RNA polymerase
II promoter" evidence=ISO;TAS] [GO:0048146 "positive regulation of
fibroblast proliferation" evidence=ISO] [GO:0048386 "positive
regulation of retinoic acid receptor signaling pathway" evidence=ISO]
[GO:0048471 "perinuclear region of cytoplasm" evidence=IDA]
[GO:0051000 "positive regulation of nitric-oxide synthase activity"
evidence=ISO;ISS] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO;ISS] [GO:0060011 "Sertoli cell proliferation"
evidence=IMP] [GO:0060065 "uterus development" evidence=ISO]
[GO:0060068 "vagina development" evidence=ISO] [GO:0060523 "prostate
epithelial cord elongation" evidence=ISO] [GO:0060527 "prostate
epithelial cord arborization involved in prostate glandular acinus
morphogenesis" evidence=ISO] [GO:0060687 "regulation of branching
involved in prostate gland morphogenesis" evidence=ISO] [GO:0060745
"mammary gland branching involved in pregnancy" evidence=ISO]
[GO:0060749 "mammary gland alveolus development" evidence=ISO]
[GO:0060750 "epithelial cell proliferation involved in mammary gland
duct elongation" evidence=ISO] [GO:0070374 "positive regulation of
ERK1 and ERK2 cascade" evidence=IDA] [GO:0071391 "cellular response
to estrogen stimulus" evidence=ISO] [GO:1901215 "negative regulation
of neuron death" evidence=IDA] InterPro:IPR000536 InterPro:IPR001292
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105
Pfam:PF02159 PIRSF:PIRSF002527 PIRSF:PIRSF500101 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00543 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:2581 GO:GO:0005634 GO:GO:0005794
GO:GO:0048471 GO:GO:0043234 GO:GO:0051091 GO:GO:0032403 GO:GO:0005496
GO:GO:0032355 GO:GO:0046872 GO:GO:0003677 GO:GO:0051000 GO:GO:0043204
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0070374 GO:GO:0045944 GO:GO:1901215 GO:GO:0042562 GO:GO:0043195
GO:GO:0003682 GO:GO:0030315 GO:GO:0002076 GO:GO:0043124 GO:GO:0008209
GO:GO:0010629 GO:GO:0043433 GO:GO:0045742 GO:GO:0060749 GO:GO:0045429
GO:GO:0048146 GO:GO:0043523 GO:GO:0048386 GO:GO:0060750 GO:GO:0030520
GO:GO:0060011 GO:GO:0002064 GO:GO:0060068 GO:GO:0001046 GO:GO:0071391
GO:GO:0060687 GO:GO:0001547 HOVERGEN:HBG108344 CTD:2099
eggNOG:NOG320746 HOGENOM:HOG000233468 KO:K08550 OrthoDB:EOG4JM7PP
GO:GO:0030284 InterPro:IPR024736 Pfam:PF12743 GO:GO:0044429
GO:GO:0034056 GO:GO:0038052 GO:GO:0060745 GO:GO:0060527 GO:GO:0060523
GO:GO:0060065 EMBL:Y00102 EMBL:X61098 IPI:IPI00201392 PIR:S07379
RefSeq:NP_036821.1 UniGene:Rn.10595 ProteinModelPortal:P06211
SMR:P06211 STRING:P06211 PhosphoSite:P06211 PRIDE:P06211 GeneID:24890
KEGG:rno:24890 UCSC:RGD:2581 InParanoid:P06211 BindingDB:P06211
ChEMBL:CHEMBL2724 NextBio:604756 ArrayExpress:P06211
Genevestigator:P06211 Uniprot:P06211
Length = 600
Score = 108 (43.1 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 201 HYGVWSCEGCKAFFKRSI--QGHNDYM--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 255
Query: 65 NK 66
K
Sbjct: 256 MK 257
Score = 97 (39.2 bits), Expect = 0.00054, P = 0.00054
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 231 QCTIDKNRRKSCQACRLRKCYEVGMMKGG 259
Score = 38 (18.4 bits), Expect = 7.2e-07, Sum P(2) = 7.2e-07
Identities = 13/42 (30%), Positives = 20/42 (47%)
Query: 70 QHLKNS---LLYEFACTNLVELRCIVDK---AHRNQCQACRL 105
+H+ N LY C N+V L ++ + AHR A R+
Sbjct: 520 RHMSNKGMEHLYNMKCKNVVPLYDLLLEMLDAHRLHAPASRM 561
>RGD|621685 [details] [associations]
symbol:Nr2f6 "nuclear receptor subfamily 2, group F, member 6"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter"
evidence=IEA;ISO;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO;IDA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043153 "entrainment of circadian clock by photoperiod"
evidence=IEA;ISO] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA;ISO;IDA] [GO:0048666 "neuron development"
evidence=IEA;ISO] [GO:0050965 "detection of temperature stimulus
involved in sensory perception of pain" evidence=IEA;ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:621685 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0003700
GO:GO:0000122 GO:GO:0048666 GO:GO:0030522 GO:GO:0043153
HOGENOM:HOG000260820 HOVERGEN:HBG005606 CTD:2063 eggNOG:NOG277317
KO:K08549 OrthoDB:EOG4FN4HT EMBL:AF003926 IPI:IPI00192618
RefSeq:NP_620813.1 UniGene:Rn.25840 ProteinModelPortal:O09017
SMR:O09017 STRING:O09017 PhosphoSite:O09017 GeneID:245980
KEGG:rno:245980 UCSC:RGD:621685 InParanoid:O09017 NextBio:623270
ArrayExpress:O09017 Genevestigator:O09017
GermOnline:ENSRNOG00000016892 Uniprot:O09017
Length = 390
Score = 121 (47.7 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
+H G+ C++ +R I RN C++ C +D+ HRNQCQ CRLKKC +G
Sbjct: 67 KHYGVFTCEGCKSFFKRTI----RRNLSYTCRSNRD-CQIDQHHRNQCQYCRLKKCFRVG 121
Query: 64 MNKDDAQ 70
M K+ Q
Sbjct: 122 MRKEAVQ 128
Score = 106 (42.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C +D+ HRNQCQ CRLKKC +GM K+
Sbjct: 99 CQIDQHHRNQCQYCRLKKCFRVGMRKE 125
>UNIPROTKB|O09017 [details] [associations]
symbol:Nr2f6 "Nuclear receptor subfamily 2 group F member
6" species:10116 "Rattus norvegicus" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:621685 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965
GO:GO:0003700 GO:GO:0000122 GO:GO:0048666 GO:GO:0030522
GO:GO:0043153 HOGENOM:HOG000260820 HOVERGEN:HBG005606 CTD:2063
eggNOG:NOG277317 KO:K08549 OrthoDB:EOG4FN4HT EMBL:AF003926
IPI:IPI00192618 RefSeq:NP_620813.1 UniGene:Rn.25840
ProteinModelPortal:O09017 SMR:O09017 STRING:O09017
PhosphoSite:O09017 GeneID:245980 KEGG:rno:245980 UCSC:RGD:621685
InParanoid:O09017 NextBio:623270 ArrayExpress:O09017
Genevestigator:O09017 GermOnline:ENSRNOG00000016892 Uniprot:O09017
Length = 390
Score = 121 (47.7 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
+H G+ C++ +R I RN C++ C +D+ HRNQCQ CRLKKC +G
Sbjct: 67 KHYGVFTCEGCKSFFKRTI----RRNLSYTCRSNRD-CQIDQHHRNQCQYCRLKKCFRVG 121
Query: 64 MNKDDAQ 70
M K+ Q
Sbjct: 122 MRKEAVQ 128
Score = 106 (42.4 bits), Expect = 3.2e-05, P = 3.2e-05
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C +D+ HRNQCQ CRLKKC +GM K+
Sbjct: 99 CQIDQHHRNQCQYCRLKKCFRVGMRKE 125
>UNIPROTKB|E1BZA2 [details] [associations]
symbol:NR2C1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0042803 "protein homodimerization activity"
evidence=IEA] [GO:0042826 "histone deacetylase binding"
evidence=IEA] [GO:0048386 "positive regulation of retinoic acid
receptor signaling pathway" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0046872
GO:GO:0016605 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0000122 GO:GO:0030522 GO:GO:0048386
GeneTree:ENSGT00700000104390 OMA:QNSNEMS EMBL:AADN02005941
EMBL:AADN02005942 EMBL:AADN02005943 IPI:IPI00681663
Ensembl:ENSGALT00000030638 ArrayExpress:E1BZA2 Uniprot:E1BZA2
Length = 639
Score = 124 (48.7 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R I +N +C+ GT C+++K HRN+CQ CRL++C+ G
Sbjct: 160 RHYGAVTCEGCKGFFKRSI----RKNLVYSCR-GTKDCVINKHHRNRCQYCRLQRCIAFG 214
Query: 64 MNKDDAQ 70
M +D Q
Sbjct: 215 MKQDSVQ 221
Score = 107 (42.7 bits), Expect = 5.0e-05, P = 5.0e-05
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 41 CIV--DKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRN 98
C+V DKA A + C G K + ++ +L+Y +C + C+++K HRN
Sbjct: 150 CVVCGDKASGRHYGAVTCEGC--KGFFK---RSIRKNLVY--SCRGTKD--CVINKHHRN 200
Query: 99 QCQACRLKKCLNMGMNKD 116
+CQ CRL++C+ GM +D
Sbjct: 201 RCQYCRLQRCIAFGMKQD 218
>UNIPROTKB|Q7YRQ5 [details] [associations]
symbol:HNF4A "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=IEA] [GO:0070328 "triglyceride homeostasis"
evidence=IEA] [GO:0060395 "SMAD protein signal transduction"
evidence=IEA] [GO:0055091 "phospholipid homeostasis" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0019216 "regulation of lipid metabolic process" evidence=IEA]
[GO:0010470 "regulation of gastrulation" evidence=IEA] [GO:0009749
"response to glucose stimulus" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0006805 "xenobiotic metabolic process"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006591 "ornithine metabolic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005504 "fatty acid binding" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005737
GO:GO:0008285 GO:GO:0030308 GO:GO:0046872 GO:GO:0007596
GO:GO:0009749 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0006629 GO:GO:0019216 GO:GO:0042593
GO:GO:0055091 GO:GO:0050796 GO:GO:0003705 GO:GO:0044212
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805
GO:GO:0006591 GO:GO:0030522 GO:GO:0007548 GO:GO:0060395
GO:GO:0023019 HOVERGEN:HBG005606 GO:GO:0010470 CTD:3172 KO:K07292
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260822 OMA:PAFCDLP
HSSP:P20153 EMBL:DAAA02036724 EMBL:AY318752 IPI:IPI00691213
RefSeq:NP_001015557.1 UniGene:Bt.107136 SMR:Q7YRQ5 STRING:Q7YRQ5
Ensembl:ENSBTAT00000016078 GeneID:509200 KEGG:bta:509200
InParanoid:Q7YRQ5 NextBio:20868867 Uniprot:Q7YRQ5
Length = 455
Score = 122 (48.0 bits), Expect = 7.5e-07, P = 7.5e-07
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 2 TFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLN 61
T +H G + C+ G R V K H C+ + +C+VDK RNQC+ CRLKKC
Sbjct: 59 TGKHYGASSCDGCK-GFFRRSVRKNHMYSCRFSR----QCVVDKDKRNQCRYCRLKKCFR 113
Query: 62 MGMNKDDAQHLKNSL 76
GM K+ Q+ ++ +
Sbjct: 114 AGMKKEAVQNERDRI 128
Score = 103 (41.3 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+C+VDK RNQC+ CRLKKC GM K+
Sbjct: 92 QCVVDKDKRNQCRYCRLKKCFRAGMKKE 119
>UNIPROTKB|P10588 [details] [associations]
symbol:NR2F6 "Nuclear receptor subfamily 2 group F member
6" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043153 "entrainment of circadian clock by
photoperiod" evidence=IEA] [GO:0048666 "neuron development"
evidence=IEA] [GO:0050965 "detection of temperature stimulus
involved in sensory perception of pain" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0003677 "DNA binding" evidence=TAS] [GO:0007165
"signal transduction" evidence=TAS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=TAS] [GO:0004887 "thyroid hormone
receptor activity" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005654
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965
GO:GO:0000122 GO:GO:0048666 EMBL:CH471106 GO:GO:0006367
GO:GO:0043153 GO:GO:0004887 HOGENOM:HOG000260820 HOVERGEN:HBG005606
EMBL:X12794 EMBL:AK314961 EMBL:BC002669 EMBL:BC063018 EMBL:BC084544
IPI:IPI00021429 PIR:S02709 RefSeq:NP_005225.2 UniGene:Hs.466148
ProteinModelPortal:P10588 SMR:P10588 IntAct:P10588 STRING:P10588
PhosphoSite:P10588 DMDM:23503053 PRIDE:P10588
Ensembl:ENST00000291442 GeneID:2063 KEGG:hsa:2063 UCSC:uc002nfq.3
CTD:2063 GeneCards:GC19M017342 HGNC:HGNC:7977 MIM:132880
neXtProt:NX_P10588 PharmGKB:PA31760 eggNOG:NOG277317
InParanoid:P10588 KO:K08549 OMA:DPNGGTN OrthoDB:EOG4FN4HT
PhylomeDB:P10588 ChEMBL:CHEMBL1961791 GenomeRNAi:2063 NextBio:8381
ArrayExpress:P10588 Bgee:P10588 CleanEx:HS_NR2F6
Genevestigator:P10588 GermOnline:ENSG00000160113 Uniprot:P10588
Length = 404
Score = 121 (47.7 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQ 70
TC+ G + RN C++ C +D+ HRNQCQ CRLKKC +GM K+ Q
Sbjct: 72 TCE-GCKSFFKRSIRRNLSYTCRSNRD-CQIDQHHRNQCQYCRLKKCFRVGMRKEAVQ 127
Score = 106 (42.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C +D+ HRNQCQ CRLKKC +GM K+
Sbjct: 98 CQIDQHHRNQCQYCRLKKCFRVGMRKE 124
>UNIPROTKB|E2R9S0 [details] [associations]
symbol:HNF4A "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=IEA] [GO:0070328 "triglyceride homeostasis"
evidence=IEA] [GO:0060395 "SMAD protein signal transduction"
evidence=IEA] [GO:0055091 "phospholipid homeostasis" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0019216 "regulation of lipid metabolic process" evidence=IEA]
[GO:0010470 "regulation of gastrulation" evidence=IEA] [GO:0009749
"response to glucose stimulus" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0006805 "xenobiotic metabolic process"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006591 "ornithine metabolic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005504 "fatty acid binding" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005737
GO:GO:0008285 GO:GO:0030308 GO:GO:0046872 GO:GO:0007596
GO:GO:0009749 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0006629 GO:GO:0019216 GO:GO:0042593
GO:GO:0055091 GO:GO:0050796 GO:GO:0003705 GO:GO:0044212
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805
GO:GO:0006591 GO:GO:0030522 GO:GO:0007548 GO:GO:0060395
GO:GO:0023019 GO:GO:0010470 CTD:3172 KO:K07292
GeneTree:ENSGT00690000101777 OMA:PAFCDLP EMBL:AAEX03013956
RefSeq:XP_852731.1 ProteinModelPortal:E2R9S0
Ensembl:ENSCAFT00000014977 GeneID:485884 KEGG:cfa:485884
NextBio:20859787 Uniprot:E2R9S0
Length = 474
Score = 122 (48.0 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 2 TFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLN 61
T +H G + C+ G R V K H C+ + +C+VDK RNQC+ CRLKKC
Sbjct: 68 TGKHYGASSCDGCK-GFFRRSVRKNHMYSCRFSR----QCVVDKDKRNQCRYCRLKKCFR 122
Query: 62 MGMNKDDAQHLKNSL 76
GM K+ Q+ ++ +
Sbjct: 123 AGMKKEAVQNERDRI 137
Score = 103 (41.3 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+C+VDK RNQC+ CRLKKC GM K+
Sbjct: 101 QCVVDKDKRNQCRYCRLKKCFRAGMKKE 128
>UNIPROTKB|P41235 [details] [associations]
symbol:HNF4A "Hepatocyte nuclear factor 4-alpha"
species:9606 "Homo sapiens" [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0010470
"regulation of gastrulation" evidence=IEA] [GO:0023019 "signal
transduction involved in regulation of gene expression"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0060395 "SMAD protein signal transduction"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP;IDA] [GO:0005654 "nucleoplasm" evidence=TAS]
[GO:0006367 "transcription initiation from RNA polymerase II
promoter" evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0031018 "endocrine pancreas development" evidence=TAS]
[GO:0060398 "regulation of growth hormone receptor signaling
pathway" evidence=NAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IMP;IDA] [GO:0008285
"negative regulation of cell proliferation" evidence=IMP]
[GO:0030308 "negative regulation of cell growth" evidence=IMP]
[GO:0007596 "blood coagulation" evidence=IDA] [GO:0005102 "receptor
binding" evidence=IDA] [GO:0005504 "fatty acid binding"
evidence=IDA] [GO:0042803 "protein homodimerization activity"
evidence=IDA] [GO:0019216 "regulation of lipid metabolic process"
evidence=IDA] [GO:0006591 "ornithine metabolic process"
evidence=IMP] [GO:0006805 "xenobiotic metabolic process"
evidence=IMP] [GO:0055088 "lipid homeostasis" evidence=IMP]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0042593 "glucose
homeostasis" evidence=ISS] [GO:2000189 "positive regulation of
cholesterol homeostasis" evidence=ISS] [GO:0001077 "RNA polymerase
II core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=ISS] [GO:0009749 "response to glucose
stimulus" evidence=ISS] [GO:0050796 "regulation of insulin
secretion" evidence=ISS] [GO:0033613 "activating transcription
factor binding" evidence=ISS] [GO:0055091 "phospholipid
homeostasis" evidence=ISS] [GO:0070328 "triglyceride homeostasis"
evidence=ISS] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=IDA] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005737 EMBL:CH471077 Reactome:REACT_111045
GO:GO:0008285 GO:GO:0042803 GO:GO:0005654 GO:GO:0030154
GO:GO:0030308 GO:GO:0042493 GO:GO:0046872 GO:GO:0007596
Pathway_Interaction_DB:hif1_tfpathway GO:GO:0009749 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0005102 GO:GO:0006629
GO:GO:0019216 GO:GO:0045722 GO:GO:0042593 GO:GO:0055091
Orphanet:552 Pathway_Interaction_DB:hnf3bpathway GO:GO:0050796
GO:GO:0005667 GO:GO:0003705 GO:GO:0001077 GO:GO:0044212
GO:GO:0000062 GO:GO:0006637 GO:GO:0016290 GO:GO:2000189
GO:GO:0005504 GO:GO:0070328 GO:GO:0006805 GO:GO:0006591
GO:GO:0043433 GO:GO:0030522
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0031018
GO:GO:0051591 GO:GO:0007548 GO:GO:0006367 GO:GO:0045723
GO:GO:0060395 GO:GO:0045930 GO:GO:0023019 GO:GO:0042524
GO:GO:0045216 MIM:606391 HOVERGEN:HBG005606 GO:GO:0010470
GO:GO:0033159 GO:GO:0033613 EMBL:X87870 EMBL:X87871 EMBL:X87872
EMBL:Z49825 EMBL:AY680696 EMBL:AY680697 EMBL:AY680698 EMBL:U72969
EMBL:U72959 EMBL:U72961 EMBL:U72962 EMBL:U72963 EMBL:U72964
EMBL:U72965 EMBL:U72966 EMBL:U72967 EMBL:U72968 EMBL:EF591040
EMBL:AL132772 EMBL:BC137539 EMBL:BC137540 EMBL:X76930
IPI:IPI00013196 IPI:IPI00216080 IPI:IPI00300558 IPI:IPI00412368
IPI:IPI00641248 IPI:IPI00645235 IPI:IPI00847265 PIR:JC4937
PIR:JC4938 PIR:JC6096 RefSeq:NP_000448.3 RefSeq:NP_001025174.1
RefSeq:NP_001025175.1 RefSeq:NP_001245284.1 RefSeq:NP_787110.2
RefSeq:NP_849181.1 UniGene:Hs.116462 PDB:1PZL PDB:3CBB PDB:3FS1
PDBsum:1PZL PDBsum:3CBB PDBsum:3FS1 ProteinModelPortal:P41235
SMR:P41235 DIP:DIP-499N IntAct:P41235 MINT:MINT-269829
STRING:P41235 PhosphoSite:P41235 DMDM:148886624 PaxDb:P41235
PRIDE:P41235 Ensembl:ENST00000316099 Ensembl:ENST00000316673
Ensembl:ENST00000415691 Ensembl:ENST00000443598
Ensembl:ENST00000457232 GeneID:3172 KEGG:hsa:3172 UCSC:uc002xlt.3
UCSC:uc002xlu.3 UCSC:uc002xly.3 UCSC:uc002xma.3 CTD:3172
GeneCards:GC20P042984 HGNC:HGNC:5024 HPA:CAB019417 HPA:HPA004712
MIM:125850 MIM:600281 neXtProt:NX_P41235 Orphanet:263455
PharmGKB:PA29349 eggNOG:NOG241134 KO:K07292 BindingDB:P41235
ChEMBL:CHEMBL5398 EvolutionaryTrace:P41235 GenomeRNAi:3172
NextBio:12578 ArrayExpress:P41235 Bgee:P41235 Genevestigator:P41235
GermOnline:ENSG00000101076 GO:GO:0007164 GO:GO:0060398
GO:GO:0032534 Uniprot:P41235
Length = 474
Score = 122 (48.0 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 2 TFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLN 61
T +H G + C+ G R V K H C+ + +C+VDK RNQC+ CRLKKC
Sbjct: 68 TGKHYGASSCDGCK-GFFRRSVRKNHMYSCRFSR----QCVVDKDKRNQCRYCRLKKCFR 122
Query: 62 MGMNKDDAQHLKNSL 76
GM K+ Q+ ++ +
Sbjct: 123 AGMKKEAVQNERDRI 137
Score = 103 (41.3 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+C+VDK RNQC+ CRLKKC GM K+
Sbjct: 101 QCVVDKDKRNQCRYCRLKKCFRAGMKKE 128
>UNIPROTKB|Q1I181 [details] [associations]
symbol:HNF4A "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000189 "positive regulation of cholesterol
homeostasis" evidence=IEA] [GO:0070328 "triglyceride homeostasis"
evidence=IEA] [GO:0060395 "SMAD protein signal transduction"
evidence=IEA] [GO:0055091 "phospholipid homeostasis" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0033613 "activating transcription
factor binding" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0023019 "signal transduction
involved in regulation of gene expression" evidence=IEA]
[GO:0019216 "regulation of lipid metabolic process" evidence=IEA]
[GO:0010470 "regulation of gastrulation" evidence=IEA] [GO:0009749
"response to glucose stimulus" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0007548 "sex differentiation"
evidence=IEA] [GO:0006805 "xenobiotic metabolic process"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006591 "ornithine metabolic process" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005504 "fatty acid binding" evidence=IEA] [GO:0005102
"receptor binding" evidence=IEA] [GO:0003705 "RNA polymerase II
distal enhancer sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005737
GO:GO:0008285 GO:GO:0030308 GO:GO:0046872 GO:GO:0007596
GO:GO:0009749 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0006629 GO:GO:0019216 GO:GO:0042593
GO:GO:0055091 GO:GO:0050796 GO:GO:0003705 GO:GO:0044212
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805
GO:GO:0006591 GO:GO:0030522 GO:GO:0007548 GO:GO:0060395
GO:GO:0023019 HOVERGEN:HBG005606 GO:GO:0010470 CTD:3172 KO:K07292
GeneTree:ENSGT00690000101777 OMA:PAFCDLP EMBL:CU062400
EMBL:DQ061106 RefSeq:NP_001038036.1 UniGene:Ssc.19208 SMR:Q1I181
STRING:Q1I181 Ensembl:ENSSSCT00000008067 GeneID:733636
KEGG:ssc:733636 Uniprot:Q1I181
Length = 474
Score = 122 (48.0 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 2 TFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLN 61
T +H G + C+ G R V K H C+ + +C+VDK RNQC+ CRLKKC
Sbjct: 68 TGKHYGASSCDGCK-GFFRRSVRKNHMYSCRFSR----QCVVDKDKRNQCRYCRLKKCFR 122
Query: 62 MGMNKDDAQHLKNSL 76
GM K+ Q+ ++ +
Sbjct: 123 AGMKKEAVQNERDRI 137
Score = 103 (41.3 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+C+VDK RNQC+ CRLKKC GM K+
Sbjct: 101 QCVVDKDKRNQCRYCRLKKCFRAGMKKE 128
>MGI|MGI:109128 [details] [associations]
symbol:Hnf4a "hepatic nuclear factor 4, alpha" species:10090
"Mus musculus" [GO:0000062 "fatty-acyl-CoA binding" evidence=ISO]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=ISO]
[GO:0003677 "DNA binding" evidence=ISO;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005504 "fatty acid binding" evidence=ISO] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005667 "transcription factor complex" evidence=ISO]
[GO:0005737 "cytoplasm" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=ISO;IMP] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0006591 "ornithine metabolic process"
evidence=ISO] [GO:0006629 "lipid metabolic process" evidence=IMP]
[GO:0006637 "acyl-CoA metabolic process" evidence=ISO] [GO:0006805
"xenobiotic metabolic process" evidence=ISO] [GO:0007164
"establishment of tissue polarity" evidence=ISO] [GO:0007548 "sex
differentiation" evidence=IMP] [GO:0007596 "blood coagulation"
evidence=ISO] [GO:0008134 "transcription factor binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=ISO] [GO:0009749 "response to glucose stimulus"
evidence=ISO;IMP] [GO:0010470 "regulation of gastrulation"
evidence=IMP] [GO:0016290 "palmitoyl-CoA hydrolase activity"
evidence=ISO] [GO:0019216 "regulation of lipid metabolic process"
evidence=ISO] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IDA] [GO:0030154 "cell
differentiation" evidence=ISO] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=IEA] [GO:0032534 "regulation
of microvillus assembly" evidence=ISO] [GO:0033159 "negative
regulation of protein import into nucleus, translocation"
evidence=ISO] [GO:0033613 "activating transcription factor binding"
evidence=IPI] [GO:0042524 "negative regulation of tyrosine
phosphorylation of Stat5 protein" evidence=ISO] [GO:0042593
"glucose homeostasis" evidence=IMP] [GO:0042803 "protein
homodimerization activity" evidence=ISO] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043433
"negative regulation of sequence-specific DNA binding transcription
factor activity" evidence=ISO] [GO:0043565 "sequence-specific DNA
binding" evidence=ISO;IDA] [GO:0044212 "transcription regulatory
region DNA binding" evidence=ISO;IDA] [GO:0045216 "cell-cell
junction organization" evidence=ISO] [GO:0045722 "positive
regulation of gluconeogenesis" evidence=ISO] [GO:0045723 "positive
regulation of fatty acid biosynthetic process" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045930 "negative regulation of mitotic cell
cycle" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter"
evidence=IGI;ISO;IMP;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0050732 "negative regulation of peptidyl-tyrosine
phosphorylation" evidence=ISO] [GO:0050796 "regulation of insulin
secretion" evidence=IMP] [GO:0055088 "lipid homeostasis"
evidence=ISO] [GO:0055091 "phospholipid homeostasis" evidence=IMP]
[GO:0060395 "SMAD protein signal transduction" evidence=IDA]
[GO:0070328 "triglyceride homeostasis" evidence=IMP] [GO:0070491
"repressing transcription factor binding" evidence=ISO] [GO:2000189
"positive regulation of cholesterol homeostasis" evidence=IMP]
Reactome:REACT_13641 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:109128 GO:GO:0005829
GO:GO:0005634 GO:GO:0008285 GO:GO:0030154 GO:GO:0030308
GO:GO:0042493 GO:GO:0046872 GO:GO:0007596 GO:GO:0009749
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0006629 GO:GO:0045722 GO:GO:0042593 GO:GO:0055091
GO:GO:0050796 GO:GO:0005667 GO:GO:0003705 GO:GO:0001077
GO:GO:0044212 Reactome:REACT_127416 GO:GO:0000062 GO:GO:0006637
GO:GO:0016290 GO:GO:2000189 GO:GO:0005504 GO:GO:0070328
GO:GO:0006805 GO:GO:0006591 GO:GO:0043433 GO:GO:0030522
GO:GO:0031018 GO:GO:0051591 GO:GO:0007548 GO:GO:0045723
GO:GO:0060395 GO:GO:0045930 GO:GO:0023019 GO:GO:0042524
GO:GO:0045216 HOVERGEN:HBG005606 EMBL:AL591488 GO:GO:0010470
GO:GO:0033159 CTD:3172 eggNOG:NOG241134 KO:K07292 GO:GO:0007164
GO:GO:0032534 EMBL:D29015 EMBL:AY902317 EMBL:AK143948 EMBL:BC039220
EMBL:EF193393 IPI:IPI00230333 IPI:IPI00321964 PIR:S52074
RefSeq:NP_032287.2 UniGene:Mm.202383 ProteinModelPortal:P49698
SMR:P49698 IntAct:P49698 STRING:P49698 PhosphoSite:P49698
PaxDb:P49698 PRIDE:P49698 Ensembl:ENSMUST00000018094
Ensembl:ENSMUST00000109411 GeneID:15378 KEGG:mmu:15378
UCSC:uc008nta.2 UCSC:uc008ntb.1 GeneTree:ENSGT00690000101777
HOGENOM:HOG000260822 InParanoid:P49698 OMA:PAFCDLP ChiTaRS:HNF4A
NextBio:288038 Bgee:P49698 CleanEx:MM_HNF4A Genevestigator:P49698
GermOnline:ENSMUSG00000017950 Uniprot:P49698
Length = 474
Score = 122 (48.0 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 2 TFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLN 61
T +H G + C+ G R V K H C+ + +C+VDK RNQC+ CRLKKC
Sbjct: 68 TGKHYGASSCDGCK-GFFRRSVRKNHMYSCRFSR----QCVVDKDKRNQCRYCRLKKCFR 122
Query: 62 MGMNKDDAQHLKNSL 76
GM K+ Q+ ++ +
Sbjct: 123 AGMKKEAVQNERDRI 137
Score = 103 (41.3 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+C+VDK RNQC+ CRLKKC GM K+
Sbjct: 101 QCVVDKDKRNQCRYCRLKKCFRAGMKKE 128
>RGD|2810 [details] [associations]
symbol:Hnf4a "hepatocyte nuclear factor 4, alpha" species:10116
"Rattus norvegicus" [GO:0000062 "fatty-acyl-CoA binding"
evidence=IPI] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IDA]
[GO:0003677 "DNA binding" evidence=ISO;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IMP;TAS] [GO:0003705 "RNA polymerase II distal enhancer
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=TAS] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005504 "fatty acid binding" evidence=ISO;IPI] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005667 "transcription factor
complex" evidence=IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0006591 "ornithine
metabolic process" evidence=ISO] [GO:0006629 "lipid metabolic
process" evidence=ISO] [GO:0006637 "acyl-CoA metabolic process"
evidence=IDA] [GO:0006805 "xenobiotic metabolic process"
evidence=ISO] [GO:0007164 "establishment of tissue polarity"
evidence=IDA] [GO:0007548 "sex differentiation" evidence=ISO]
[GO:0007596 "blood coagulation" evidence=ISO] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO;IDA] [GO:0009749 "response to glucose
stimulus" evidence=ISO;IDA] [GO:0010470 "regulation of gastrulation"
evidence=ISO] [GO:0016290 "palmitoyl-CoA hydrolase activity"
evidence=IDA] [GO:0019216 "regulation of lipid metabolic process"
evidence=ISO] [GO:0023019 "signal transduction involved in regulation
of gene expression" evidence=ISO] [GO:0030154 "cell differentiation"
evidence=IMP] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0032534 "regulation of microvillus assembly"
evidence=IMP] [GO:0033159 "negative regulation of protein import into
nucleus, translocation" evidence=IDA] [GO:0033613 "activating
transcription factor binding" evidence=ISO] [GO:0042493 "response to
drug" evidence=IEP] [GO:0042524 "negative regulation of tyrosine
phosphorylation of Stat5 protein" evidence=IDA] [GO:0042593 "glucose
homeostasis" evidence=ISO] [GO:0042803 "protein homodimerization
activity" evidence=ISO;IMP] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=ISO;IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045216 "cell-cell junction organization"
evidence=IDA] [GO:0045722 "positive regulation of gluconeogenesis"
evidence=IMP] [GO:0045723 "positive regulation of fatty acid
biosynthetic process" evidence=IMP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=ISO;IDA] [GO:0045930
"negative regulation of mitotic cell cycle" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;IDA] [GO:0050732 "negative regulation of
peptidyl-tyrosine phosphorylation" evidence=IDA] [GO:0050796
"regulation of insulin secretion" evidence=ISO] [GO:0051591 "response
to cAMP" evidence=IEP] [GO:0055088 "lipid homeostasis" evidence=ISO]
[GO:0055091 "phospholipid homeostasis" evidence=ISO] [GO:0060395
"SMAD protein signal transduction" evidence=ISO] [GO:0070328
"triglyceride homeostasis" evidence=ISO] [GO:0070491 "repressing
transcription factor binding" evidence=IPI] [GO:2000189 "positive
regulation of cholesterol homeostasis" evidence=ISO]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104
Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:2810
GO:GO:0005737 GO:GO:0008285 GO:GO:0042803 GO:GO:0030154 GO:GO:0030308
GO:GO:0042493 GO:GO:0046872 GO:GO:0007596 GO:GO:0009749 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006629 GO:GO:0045722
GO:GO:0042593 GO:GO:0055091 GO:GO:0050796 GO:GO:0005667 GO:GO:0003705
GO:GO:0001077 GO:GO:0044212 GO:GO:0000062 GO:GO:0006637 GO:GO:0016290
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805 GO:GO:0006591
GO:GO:0043433 GO:GO:0030522 GO:GO:0051591 GO:GO:0007548 GO:GO:0045723
GO:GO:0060395 GO:GO:0045930 GO:GO:0023019 GO:GO:0042524 GO:GO:0045216
HOVERGEN:HBG005606 GO:GO:0010470 GO:GO:0033159 CTD:3172
eggNOG:NOG241134 KO:K07292 GO:GO:0007164 GO:GO:0032534
HOGENOM:HOG000260822 EMBL:D10554 EMBL:X57133 EMBL:EF193392
IPI:IPI00207142 IPI:IPI00231412 PIR:A36471 PIR:S23502
RefSeq:NP_071516.2 UniGene:Rn.12238 PDB:1M7W PDBsum:1M7W
ProteinModelPortal:P22449 SMR:P22449 IntAct:P22449 STRING:P22449
PhosphoSite:P22449 GeneID:25735 KEGG:rno:25735 InParanoid:P22449
EvolutionaryTrace:P22449 NextBio:607871 ArrayExpress:P22449
Genevestigator:P22449 GermOnline:ENSRNOG00000008895 Uniprot:P22449
Length = 474
Score = 122 (48.0 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 2 TFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLN 61
T +H G + C+ G R V K H C+ + +C+VDK RNQC+ CRLKKC
Sbjct: 68 TGKHYGASSCDGCK-GFFRRSVRKNHMYSCRFSR----QCVVDKDKRNQCRYCRLKKCFR 122
Query: 62 MGMNKDDAQHLKNSL 76
GM K+ Q+ ++ +
Sbjct: 123 AGMKKEAVQNERDRI 137
Score = 103 (41.3 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+C+VDK RNQC+ CRLKKC GM K+
Sbjct: 101 QCVVDKDKRNQCRYCRLKKCFRAGMKKE 128
>UNIPROTKB|G3V750 [details] [associations]
symbol:Hnf4a "Hepatocyte nuclear factor 4, alpha, isoform
CRA_a" species:10116 "Rattus norvegicus" [GO:0003705 "RNA
polymerase II distal enhancer sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005102 "receptor
binding" evidence=IEA] [GO:0005504 "fatty acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0006591 "ornithine metabolic process"
evidence=IEA] [GO:0006629 "lipid metabolic process" evidence=IEA]
[GO:0006805 "xenobiotic metabolic process" evidence=IEA]
[GO:0007548 "sex differentiation" evidence=IEA] [GO:0007596 "blood
coagulation" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0009749 "response to glucose
stimulus" evidence=IEA] [GO:0010470 "regulation of gastrulation"
evidence=IEA] [GO:0019216 "regulation of lipid metabolic process"
evidence=IEA] [GO:0023019 "signal transduction involved in
regulation of gene expression" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0033613 "activating
transcription factor binding" evidence=IEA] [GO:0042593 "glucose
homeostasis" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0050796 "regulation of insulin secretion" evidence=IEA]
[GO:0055091 "phospholipid homeostasis" evidence=IEA] [GO:0060395
"SMAD protein signal transduction" evidence=IEA] [GO:0070328
"triglyceride homeostasis" evidence=IEA] [GO:2000189 "positive
regulation of cholesterol homeostasis" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:2810 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522 EMBL:CH474005
CTD:3172 KO:K07292 GeneTree:ENSGT00690000101777 RefSeq:NP_071516.2
UniGene:Rn.12238 GeneID:25735 KEGG:rno:25735
Ensembl:ENSRNOT00000011978 Uniprot:G3V750
Length = 474
Score = 122 (48.0 bits), Expect = 8.0e-07, P = 8.0e-07
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 2 TFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLN 61
T +H G + C+ G R V K H C+ + +C+VDK RNQC+ CRLKKC
Sbjct: 68 TGKHYGASSCDGCK-GFFRRSVRKNHMYSCRFSR----QCVVDKDKRNQCRYCRLKKCFR 122
Query: 62 MGMNKDDAQHLKNSL 76
GM K+ Q+ ++ +
Sbjct: 123 AGMKKEAVQNERDRI 137
Score = 103 (41.3 bits), Expect = 9.0e-05, P = 9.0e-05
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+C+VDK RNQC+ CRLKKC GM K+
Sbjct: 101 QCVVDKDKRNQCRYCRLKKCFRAGMKKE 128
>UNIPROTKB|F1N3S3 [details] [associations]
symbol:NR2F6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0050965 "detection of temperature stimulus involved in
sensory perception of pain" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043153 "entrainment of circadian clock
by photoperiod" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0000122
GO:GO:0048666 GO:GO:0030522 GO:GO:0043153 CTD:2063 KO:K08549
OMA:DPNGGTN EMBL:DAAA02019082 IPI:IPI00705246 RefSeq:XP_002688591.2
RefSeq:XP_002704762.2 Ensembl:ENSBTAT00000014791 GeneID:100296331
KEGG:bta:100296331 Uniprot:F1N3S3
Length = 412
Score = 121 (47.7 bits), Expect = 8.2e-07, P = 8.2e-07
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQ 70
TC+ G + RN C++ C +D+ HRNQCQ CRLKKC +GM K+ Q
Sbjct: 74 TCE-GCKSFFKRSIRRNLSYTCRSNRD-CQIDQHHRNQCQYCRLKKCFRVGMRKEAVQ 129
Score = 106 (42.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C +D+ HRNQCQ CRLKKC +GM K+
Sbjct: 100 CQIDQHHRNQCQYCRLKKCFRVGMRKE 126
>UNIPROTKB|F1S962 [details] [associations]
symbol:NR2F6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0050965 "detection of temperature stimulus involved in
sensory perception of pain" evidence=IEA] [GO:0048666 "neuron
development" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043153 "entrainment of circadian clock
by photoperiod" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0000122
GO:GO:0048666 GO:GO:0030522 GO:GO:0043153 CTD:2063 KO:K08549
OMA:DPNGGTN EMBL:CU914416 RefSeq:XP_003123537.1 UniGene:Ssc.1893
Ensembl:ENSSSCT00000015156 GeneID:100516724 KEGG:ssc:100516724
Uniprot:F1S962
Length = 414
Score = 121 (47.7 bits), Expect = 8.3e-07, P = 8.3e-07
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQ 70
TC+ G + RN C++ C +D+ HRNQCQ CRLKKC +GM K+ Q
Sbjct: 76 TCE-GCKSFFKRSIRRNLSYTCRSNRD-CQIDQHHRNQCQYCRLKKCFRVGMRKEAVQ 131
Score = 106 (42.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C +D+ HRNQCQ CRLKKC +GM K+
Sbjct: 102 CQIDQHHRNQCQYCRLKKCFRVGMRKE 128
>UNIPROTKB|E2R3D0 [details] [associations]
symbol:NR2F6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0050965 "detection of temperature stimulus
involved in sensory perception of pain" evidence=IEA] [GO:0048666
"neuron development" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0043153 "entrainment of circadian
clock by photoperiod" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0050965 GO:GO:0000122
GO:GO:0048666 GO:GO:0030522 GO:GO:0043153 CTD:2063 KO:K08549
OMA:DPNGGTN EMBL:AAEX03012299 EMBL:AAEX03012298 RefSeq:XP_852412.1
Ensembl:ENSCAFT00000024566 GeneID:609720 KEGG:cfa:609720
NextBio:20895307 Uniprot:E2R3D0
Length = 416
Score = 121 (47.7 bits), Expect = 8.4e-07, P = 8.4e-07
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQ 70
TC+ G + RN C++ C +D+ HRNQCQ CRLKKC +GM K+ Q
Sbjct: 77 TCE-GCKSFFKRSIRRNLSYTCRSNRD-CQIDQHHRNQCQYCRLKKCFRVGMRKEAVQ 132
Score = 106 (42.4 bits), Expect = 3.5e-05, P = 3.5e-05
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C +D+ HRNQCQ CRLKKC +GM K+
Sbjct: 103 CQIDQHHRNQCQYCRLKKCFRVGMRKE 129
>UNIPROTKB|E5L8C9 [details] [associations]
symbol:ESR1 "Estrogen receptor alpha" species:9031 "Gallus
gallus" [GO:0005496 "steroid binding" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0001046 "core promoter
sequence-specific DNA binding" evidence=IEA] [GO:0001547 "antral
ovarian follicle growth" evidence=IEA] [GO:0002064 "epithelial cell
development" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0008013 "beta-catenin binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008209 "androgen metabolic process" evidence=IEA] [GO:0008584
"male gonad development" evidence=IEA] [GO:0010629 "negative
regulation of gene expression" evidence=IEA] [GO:0034056 "estrogen
response element binding" evidence=IEA] [GO:0038052
"estrogen-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043124 "negative regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045429 "positive regulation of nitric
oxide biosynthetic process" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048146 "positive regulation of fibroblast
proliferation" evidence=IEA] [GO:0048386 "positive regulation of
retinoic acid receptor signaling pathway" evidence=IEA] [GO:0051000
"positive regulation of nitric-oxide synthase activity"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0060065 "uterus development" evidence=IEA] [GO:0060068 "vagina
development" evidence=IEA] [GO:0060523 "prostate epithelial cord
elongation" evidence=IEA] [GO:0060527 "prostate epithelial cord
arborization involved in prostate glandular acinus morphogenesis"
evidence=IEA] [GO:0060687 "regulation of branching involved in
prostate gland morphogenesis" evidence=IEA] [GO:0060745 "mammary
gland branching involved in pregnancy" evidence=IEA] [GO:0060749
"mammary gland alveolus development" evidence=IEA] [GO:0060750
"epithelial cell proliferation involved in mammary gland duct
elongation" evidence=IEA] [GO:0071391 "cellular response to
estrogen stimulus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001292 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 Pfam:PF02159 PIRSF:PIRSF002527
PIRSF:PIRSF500101 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00543
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0051091
GO:GO:0042981 GO:GO:0005496 GO:GO:0046872 GO:GO:0051000
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003682 GO:GO:0043124 GO:GO:0008209
GO:GO:0010629 GO:GO:0043433 GO:GO:0045429 GO:GO:0048146
GO:GO:0048386 GeneTree:ENSGT00700000104072 GO:GO:0030520
GO:GO:0001046 GO:GO:0071391 GO:GO:0060687 InterPro:IPR024736
Pfam:PF12743 IPI:IPI00594509 UniGene:Gga.650 GO:GO:0034056
GO:GO:0038052 OMA:YRPSSDN EMBL:AADN02025376 EMBL:AADN02025377
EMBL:AADN02025378 EMBL:AADN02025379 EMBL:AADN02025380 EMBL:HQ340611
Ensembl:ENSGALT00000021168 Uniprot:E5L8C9
Length = 589
Score = 108 (43.1 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 190 HYGVWSCEGCKAFFKRSI--QGHNDYM--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 244
Query: 65 NK 66
K
Sbjct: 245 MK 246
Score = 97 (39.2 bits), Expect = 0.00053, P = 0.00053
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 220 QCTIDKNRRKSCQACRLRKCYEVGMMKGG 248
Score = 37 (18.1 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 70 QHLKNS---LLYEFACTNLVELRCIVDK---AHRNQCQACR 104
+H+ N LY C N+V L ++ + AHR A R
Sbjct: 509 RHMSNKGMEHLYNMKCKNVVPLYDLLLEMLDAHRLHAPAAR 549
>UNIPROTKB|P06212 [details] [associations]
symbol:ESR1 "Estrogen receptor" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030284 "estrogen receptor activity"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001292 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 Pfam:PF02159 PIRSF:PIRSF002527
PIRSF:PIRSF500101 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00543
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 HOVERGEN:HBG108344 CTD:2099
eggNOG:NOG320746 HOGENOM:HOG000233468 KO:K08550 OrthoDB:EOG4JM7PP
GO:GO:0030284 InterPro:IPR024736 Pfam:PF12743 EMBL:X03805
IPI:IPI00594509 PIR:A40914 RefSeq:NP_990514.1 UniGene:Gga.650
ProteinModelPortal:P06212 SMR:P06212 STRING:P06212 GeneID:396099
KEGG:gga:396099 InParanoid:P06212 NextBio:20816157 Uniprot:P06212
Length = 589
Score = 108 (43.1 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 190 HYGVWSCEGCKAFFKRSI--QGHNDYM--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 244
Query: 65 NK 66
K
Sbjct: 245 MK 246
Score = 97 (39.2 bits), Expect = 0.00053, P = 0.00053
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 220 QCTIDKNRRKSCQACRLRKCYEVGMMKGG 248
Score = 37 (18.1 bits), Expect = 8.6e-07, Sum P(2) = 8.6e-07
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 70 QHLKNS---LLYEFACTNLVELRCIVDK---AHRNQCQACR 104
+H+ N LY C N+V L ++ + AHR A R
Sbjct: 509 RHMSNKGMEHLYNMKCKNVVPLYDLLLEMLDAHRLHAPAAR 549
>UNIPROTKB|C9JKS0 [details] [associations]
symbol:NR2C2 "Nuclear receptor subfamily 2 group C member
2" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR001628 InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10
GO:GO:0003700 GO:GO:0006351 EMBL:AC090954 EMBL:AC090937
HGNC:HGNC:7972 ChiTaRS:NR2C2 IPI:IPI00902492
ProteinModelPortal:C9JKS0 SMR:C9JKS0 STRING:C9JKS0
Ensembl:ENST00000437120 HOGENOM:HOG000213778 ArrayExpress:C9JKS0
Bgee:C9JKS0 Uniprot:C9JKS0
Length = 205
Score = 114 (45.2 bits), Expect = 9.2e-07, P = 9.2e-07
Identities = 30/78 (38%), Positives = 43/78 (55%)
Query: 41 CIV--DKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRN 98
C+V DKA A + C G K + ++ +L Y +C + + CI++K HRN
Sbjct: 136 CVVCGDKASGRHYGAVSCEGC--KGFFK---RSVRKNLTY--SCRSNQD--CIINKHHRN 186
Query: 99 QCQACRLKKCLNMGMNKD 116
+CQ CRLKKCL MGM +
Sbjct: 187 RCQFCRLKKCLEMGMKME 204
>ZFIN|ZDB-GENE-030131-1077 [details] [associations]
symbol:hnf4a "hepatocyte nuclear factor 4, alpha"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-030131-1077 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522 HOVERGEN:HBG005606
GeneTree:ENSGT00690000101777 HOGENOM:HOG000260822 OMA:PAFCDLP
HSSP:P20393 EMBL:CR318614 EMBL:BC056550 IPI:IPI00496171
UniGene:Dr.77049 SMR:Q6PHH5 STRING:Q6PHH5
Ensembl:ENSDART00000028236 Ensembl:ENSDART00000145426
InParanoid:Q6PHH5 Uniprot:Q6PHH5
Length = 463
Score = 121 (47.7 bits), Expect = 9.9e-07, P = 9.9e-07
Identities = 29/75 (38%), Positives = 41/75 (54%)
Query: 2 TFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLN 61
T +H G + C+ G R V K H C+ + +CIVDK RNQC+ CRLKKC
Sbjct: 68 TGKHYGASSCDGCK-GFFRRSVRKNHMYSCRFNR----QCIVDKDKRNQCRYCRLKKCFR 122
Query: 62 MGMNKDDAQHLKNSL 76
GM K+ Q+ ++ +
Sbjct: 123 AGMKKEAVQNERDRI 137
Score = 104 (41.7 bits), Expect = 6.8e-05, P = 6.8e-05
Identities = 18/28 (64%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+CIVDK RNQC+ CRLKKC GM K+
Sbjct: 101 QCIVDKDKRNQCRYCRLKKCFRAGMKKE 128
>ZFIN|ZDB-GENE-030131-4362 [details] [associations]
symbol:nr2f6a "nuclear receptor subfamily 2, group
F, member 6a" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-030131-4362 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 HOGENOM:HOG000260820
HOVERGEN:HBG005606 KO:K08549 OMA:DPNGGTN HSSP:P20393 EMBL:CR384062
EMBL:BC065330 IPI:IPI00494205 RefSeq:NP_991120.1 UniGene:Dr.77527
SMR:Q6P117 Ensembl:ENSDART00000022379 GeneID:325637 KEGG:dre:325637
CTD:325637 InParanoid:Q6P117 NextBio:20809398 Uniprot:Q6P117
Length = 402
Score = 120 (47.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQ 70
TC+ G + RN C++ C +D+ HRNQCQ CRLKKC +GM K+ Q
Sbjct: 69 TCE-GCKSFFKRSVRRNLNYTCRSNRD-CQIDQHHRNQCQYCRLKKCFRVGMRKEAVQ 124
Score = 106 (42.4 bits), Expect = 3.3e-05, P = 3.3e-05
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C +D+ HRNQCQ CRLKKC +GM K+
Sbjct: 95 CQIDQHHRNQCQYCRLKKCFRVGMRKE 121
>ZFIN|ZDB-GENE-040426-2351 [details] [associations]
symbol:nr2f6b "nuclear receptor subfamily 2, group
F, member 6b" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-040426-2351 GO:GO:0005634 GO:GO:0046872
GeneTree:ENSGT00670000097509 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 HOGENOM:HOG000260820
HOVERGEN:HBG005606 eggNOG:NOG277317 OrthoDB:EOG4FN4HT HSSP:P20393
EMBL:BX248501 EMBL:CT573239 EMBL:BC065332 IPI:IPI00503290
RefSeq:NP_998404.1 UniGene:Dr.16181 SMR:Q6P115
Ensembl:ENSDART00000027666 Ensembl:ENSDART00000123931 GeneID:406522
KEGG:dre:406522 CTD:406522 InParanoid:Q6P115 OMA:VMGIDSI
NextBio:20818095 Uniprot:Q6P115
Length = 404
Score = 120 (47.3 bits), Expect = 1.0e-06, P = 1.0e-06
Identities = 24/58 (41%), Positives = 32/58 (55%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQ 70
TC+ G + RN C++ C +D+ HRNQCQ CRLKKC +GM K+ Q
Sbjct: 69 TCE-GCKSFFKRSIRRNLNYTCRSNR-ECQIDQHHRNQCQYCRLKKCFRVGMRKEAVQ 124
Score = 106 (42.4 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 17/27 (62%), Positives = 21/27 (77%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C +D+ HRNQCQ CRLKKC +GM K+
Sbjct: 95 CQIDQHHRNQCQYCRLKKCFRVGMRKE 121
>FB|FBgn0037436 [details] [associations]
symbol:Hr83 "Hormone receptor 83" species:7227 "Drosophila
melanogaster" [GO:0005634 "nucleus" evidence=ISS] [GO:0003707
"steroid hormone receptor activity" evidence=ISS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS;NAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 EMBL:AE014297
GO:GO:0005634 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GeneTree:ENSGT00700000104390 HSSP:P19793
eggNOG:NOG310907 EMBL:BT128747 RefSeq:NP_649647.1 UniGene:Dm.27222
SMR:Q9VI12 STRING:Q9VI12 EnsemblMetazoa:FBtr0081713 GeneID:40783
KEGG:dme:Dmel_CG10296 UCSC:CG10296-RA CTD:40783 FlyBase:FBgn0037436
InParanoid:Q9VI12 KO:K08709 OMA:LILCRKE OrthoDB:EOG4JDFP7
GenomeRNAi:40783 NextBio:820567 Uniprot:Q9VI12
Length = 278
Score = 117 (46.2 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 24/62 (38%), Positives = 34/62 (54%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
+H G++ C +R + R AC A G C+VDKA RN C +CR ++CL +G
Sbjct: 17 KHYGVSCCDGCSCFFKRSV----RRGSSYACIALVGNCVVDKARRNWCPSCRFQRCLAVG 72
Query: 64 MN 65
MN
Sbjct: 73 MN 74
Score = 105 (42.0 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 19/35 (54%), Positives = 25/35 (71%)
Query: 80 FACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMN 114
+AC LV C+VDKA RN C +CR ++CL +GMN
Sbjct: 41 YACIALVG-NCVVDKARRNWCPSCRFQRCLAVGMN 74
>UNIPROTKB|F6V0I8 [details] [associations]
symbol:ESR1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0030284 "estrogen
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001292
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105
Pfam:PF02159 PIRSF:PIRSF002527 PIRSF:PIRSF500101 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00543 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104072 CTD:2099 KO:K08550 GO:GO:0030284
InterPro:IPR024736 Pfam:PF12743 OMA:YRPSSDN
Ensembl:ENSCAFT00000000680 EMBL:AAEX03000277 EMBL:AAEX03000275
EMBL:AAEX03000276 RefSeq:XP_533454.2 GeneID:403640 KEGG:cfa:403640
Uniprot:F6V0I8
Length = 596
Score = 108 (43.1 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 197 HYGVWSCEGCKAFFKRSI--QGHNDYM--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 251
Query: 65 NK 66
K
Sbjct: 252 MK 253
Score = 97 (39.2 bits), Expect = 0.00054, P = 0.00054
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 227 QCTIDKNRRKSCQACRLRKCYEVGMMKGG 255
Score = 36 (17.7 bits), Expect = 1.1e-06, Sum P(2) = 1.1e-06
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 70 QHLKNS---LLYEFACTNLVELRCIVDK---AHRNQCQACR 104
+H+ N LY C N+V L ++ + AHR A R
Sbjct: 516 RHMSNKGMEHLYNMKCKNVVPLYDLLLEMLDAHRLHAPASR 556
>FB|FBgn0001320 [details] [associations]
symbol:kni "knirps" species:7227 "Drosophila melanogaster"
[GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS;IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0007354 "zygotic
determination of anterior/posterior axis, embryo" evidence=NAS;TAS]
[GO:0046845 "branched duct epithelial cell fate determination, open
tracheal system" evidence=TAS] [GO:0007427 "epithelial cell
migration, open tracheal system" evidence=TAS] [GO:0001078 "RNA
polymerase II core promoter proximal region sequence-specific DNA
binding transcription factor activity involved in negative
regulation of transcription" evidence=IDA] [GO:0070491 "repressing
transcription factor binding" evidence=IPI] [GO:0035151 "regulation
of tube size, open tracheal system" evidence=TAS] [GO:0007088
"regulation of mitosis" evidence=IMP] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0007424 "open tracheal system development"
evidence=TAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0035290 "trunk segmentation" evidence=TAS]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0008544
"epidermis development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] InterPro:IPR001628 InterPro:IPR013088
Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 GO:GO:0005634 GO:GO:0007088 EMBL:AE014296
GO:GO:0046872 GO:GO:0035151 GO:GO:0004879 GO:GO:0001078
GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10 GO:GO:0048813
GO:GO:0007517 GO:GO:0007427 GO:GO:0008544
GeneTree:ENSGT00700000104361 GO:GO:0046845 GO:GO:0007354 KO:K08706
GO:GO:0035290 EMBL:X13331 EMBL:AY118798 PIR:S01919
RefSeq:NP_524187.1 UniGene:Dm.2511 ProteinModelPortal:P10734
SMR:P10734 DIP:DIP-17716N IntAct:P10734 MINT:MINT-750168
STRING:P10734 PRIDE:P10734 EnsemblMetazoa:FBtr0078283 GeneID:40287
KEGG:dme:Dmel_CG4717 CTD:40287 FlyBase:FBgn0001320 eggNOG:NOG312664
InParanoid:P10734 OMA:CSIGGET PhylomeDB:P10734 GenomeRNAi:40287
NextBio:817990 Bgee:P10734 GermOnline:CG4717 Uniprot:P10734
Length = 429
Score = 120 (47.3 bits), Expect = 1.1e-06, P = 1.1e-06
Identities = 19/44 (43%), Positives = 32/44 (72%)
Query: 39 GRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFAC 82
G+CI+DK +R C+ACRL+KC N+GM+K +++ + S ++ C
Sbjct: 46 GKCIIDKKNRTTCKACRLRKCYNVGMSKGGSRYGRRSNWFKIHC 89
Score = 113 (44.8 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 20/36 (55%), Positives = 27/36 (75%)
Query: 82 CTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
C N E +CI+DK +R C+ACRL+KC N+GM+K G
Sbjct: 42 CKN--EGKCIIDKKNRTTCKACRLRKCYNVGMSKGG 75
>UNIPROTKB|F1NZ15 [details] [associations]
symbol:HNF4A "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003705 "RNA polymerase II distal enhancer sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005504 "fatty
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0006591 "ornithine
metabolic process" evidence=IEA] [GO:0006629 "lipid metabolic
process" evidence=IEA] [GO:0006805 "xenobiotic metabolic process"
evidence=IEA] [GO:0007548 "sex differentiation" evidence=IEA]
[GO:0007596 "blood coagulation" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0009749
"response to glucose stimulus" evidence=IEA] [GO:0010470
"regulation of gastrulation" evidence=IEA] [GO:0019216 "regulation
of lipid metabolic process" evidence=IEA] [GO:0023019 "signal
transduction involved in regulation of gene expression"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0033613 "activating transcription factor binding"
evidence=IEA] [GO:0042593 "glucose homeostasis" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0044212 "transcription regulatory region DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0050796
"regulation of insulin secretion" evidence=IEA] [GO:0055091
"phospholipid homeostasis" evidence=IEA] [GO:0060395 "SMAD protein
signal transduction" evidence=IEA] [GO:0070328 "triglyceride
homeostasis" evidence=IEA] [GO:2000189 "positive regulation of
cholesterol homeostasis" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005737 GO:GO:0008285 GO:GO:0030308 GO:GO:0046872
GO:GO:0009749 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0006629 GO:GO:0019216 GO:GO:0042593
GO:GO:0055091 GO:GO:0050796 GO:GO:0003705 GO:GO:0044212
GO:GO:2000189 GO:GO:0005504 GO:GO:0070328 GO:GO:0006805
GO:GO:0006591 GO:GO:0030522 GO:GO:0007548 GO:GO:0060395
GO:GO:0023019 GO:GO:0010470 GeneTree:ENSGT00690000101777
OMA:PAFCDLP EMBL:AADN02019318 IPI:IPI00574089
Ensembl:ENSGALT00000006810 ArrayExpress:F1NZ15 Uniprot:F1NZ15
Length = 455
Score = 120 (47.3 bits), Expect = 1.2e-06, P = 1.2e-06
Identities = 28/75 (37%), Positives = 41/75 (54%)
Query: 2 TFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLN 61
T +H G + C+ G R V K H C+ + +C+VDK RNQC+ CRLKKC
Sbjct: 59 TGKHYGASSCDGCK-GFFRRSVRKNHMYSCRFNR----QCVVDKDKRNQCRYCRLKKCFR 113
Query: 62 MGMNKDDAQHLKNSL 76
GM K+ Q+ ++ +
Sbjct: 114 AGMKKEAVQNERDRI 128
Score = 103 (41.3 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+C+VDK RNQC+ CRLKKC GM K+
Sbjct: 92 QCVVDKDKRNQCRYCRLKKCFRAGMKKE 119
>UNIPROTKB|F1N2D7 [details] [associations]
symbol:HNF4G "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00690000101777 EMBL:DAAA02038880
IPI:IPI00904047 Ensembl:ENSBTAT00000052638 ArrayExpress:F1N2D7
Uniprot:F1N2D7
Length = 408
Score = 119 (46.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 2 TFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLN 61
T +H G + C+ G R + K+H C+ + +C+VDK RNQC+ CRL+KC
Sbjct: 20 TGKHYGASSCDGCK-GFFRRSIRKSHVYSCRFSR----QCVVDKDKRNQCRYCRLRKCFR 74
Query: 62 MGMNKDDAQHLKNSL 76
GM K+ Q+ ++ +
Sbjct: 75 AGMKKEAVQNERDRI 89
Score = 100 (40.3 bits), Expect = 0.00015, P = 0.00015
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+C+VDK RNQC+ CRL+KC GM K+
Sbjct: 53 QCVVDKDKRNQCRYCRLRKCFRAGMKKE 80
>UNIPROTKB|Q14541 [details] [associations]
symbol:HNF4G "Hepatocyte nuclear factor 4-gamma"
species:9606 "Homo sapiens" [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367
"transcription initiation from RNA polymerase II promoter"
evidence=TAS] [GO:0010467 "gene expression" evidence=TAS]
[GO:0031018 "endocrine pancreas development" evidence=TAS]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 Reactome:REACT_111045 GO:GO:0045893
GO:GO:0005654 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006357 GO:GO:0030522
GO:GO:0031018 GO:GO:0006367 HOVERGEN:HBG005606 eggNOG:NOG241134
HOGENOM:HOG000260822 EMBL:Z49826 EMBL:BX571750 EMBL:AF133504
EMBL:AF133496 EMBL:AF133497 EMBL:AF133498 EMBL:AF133499
EMBL:AF133500 EMBL:AF133501 EMBL:AF133502 EMBL:AF133503
EMBL:AF207953 EMBL:BC105009 EMBL:BC105011 IPI:IPI00291564
IPI:IPI00852837 PIR:JC6095 RefSeq:NP_004124.4 UniGene:Hs.241529
PDB:1LV2 PDBsum:1LV2 ProteinModelPortal:Q14541 SMR:Q14541
STRING:Q14541 PhosphoSite:Q14541 DMDM:160110004 PaxDb:Q14541
PRIDE:Q14541 DNASU:3174 Ensembl:ENST00000354370
Ensembl:ENST00000396423 GeneID:3174 KEGG:hsa:3174 UCSC:uc003yaq.3
CTD:3174 GeneCards:GC08P076370 H-InvDB:HIX0007597 HGNC:HGNC:5026
HPA:HPA005438 MIM:605966 neXtProt:NX_Q14541 PharmGKB:PA29351
InParanoid:Q14541 KO:K08037 OMA:ANYSEVL OrthoDB:EOG4G4GQH
ChEMBL:CHEMBL1961786 ChiTaRS:HNF4G EvolutionaryTrace:Q14541
GenomeRNAi:3174 NextBio:12594 ArrayExpress:Q14541 Bgee:Q14541
CleanEx:HS_HNF4G Genevestigator:Q14541 GermOnline:ENSG00000164749
Uniprot:Q14541
Length = 408
Score = 119 (46.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 2 TFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLN 61
T +H G + C+ G R + K+H C+ + +C+VDK RNQC+ CRL+KC
Sbjct: 20 TGKHYGASSCDGCK-GFFRRSIRKSHVYSCRFSR----QCVVDKDKRNQCRYCRLRKCFR 74
Query: 62 MGMNKDDAQHLKNSL 76
GM K+ Q+ ++ +
Sbjct: 75 AGMKKEAVQNERDRI 89
Score = 100 (40.3 bits), Expect = 0.00015, P = 0.00015
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+C+VDK RNQC+ CRL+KC GM K+
Sbjct: 53 QCVVDKDKRNQCRYCRLRKCFRAGMKKE 80
>MGI|MGI:1353604 [details] [associations]
symbol:Hnf4g "hepatocyte nuclear factor 4, gamma"
species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IEA] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] Reactome:REACT_13641
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:1353604 GO:GO:0005829 GO:GO:0045893
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0005667 Reactome:REACT_127416 GO:GO:0030522 GO:GO:0031018
HOVERGEN:HBG005606 eggNOG:NOG241134 GeneTree:ENSGT00690000101777
HOGENOM:HOG000260822 CTD:3174 KO:K08037 OrthoDB:EOG4G4GQH
EMBL:AJ242626 IPI:IPI00322956 RefSeq:NP_038948.1 UniGene:Mm.330897
ProteinModelPortal:Q9WUU6 SMR:Q9WUU6 STRING:Q9WUU6
PhosphoSite:Q9WUU6 PRIDE:Q9WUU6 Ensembl:ENSMUST00000108393
GeneID:30942 KEGG:mmu:30942 InParanoid:Q9WUU6 NextBio:307386
Bgee:Q9WUU6 CleanEx:MM_HNF4G Genevestigator:Q9WUU6
GermOnline:ENSMUSG00000017688 Uniprot:Q9WUU6
Length = 408
Score = 119 (46.9 bits), Expect = 1.3e-06, P = 1.3e-06
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 2 TFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLN 61
T +H G + C+ G R + K+H C+ + +C+VDK RNQC+ CRL+KC
Sbjct: 20 TGKHYGASSCDGCK-GFFRRSIRKSHVYSCRFSR----QCVVDKDKRNQCRYCRLRKCFR 74
Query: 62 MGMNKDDAQHLKNSL 76
GM K+ Q+ ++ +
Sbjct: 75 AGMKKEAVQNERDRI 89
Score = 100 (40.3 bits), Expect = 0.00015, P = 0.00015
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+C+VDK RNQC+ CRL+KC GM K+
Sbjct: 53 QCVVDKDKRNQCRYCRLRKCFRAGMKKE 80
>UNIPROTKB|F1MGG2 [details] [associations]
symbol:HNF4G "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000003 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0045893
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00690000101777 OMA:ANYSEVL
EMBL:DAAA02038880 IPI:IPI00694519 UniGene:Bt.16536
Ensembl:ENSBTAT00000010892 ArrayExpress:F1MGG2 Uniprot:F1MGG2
Length = 425
Score = 119 (46.9 bits), Expect = 1.4e-06, P = 1.4e-06
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 2 TFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLN 61
T +H G + C+ G R + K+H C+ + +C+VDK RNQC+ CRL+KC
Sbjct: 37 TGKHYGASSCDGCK-GFFRRSIRKSHVYSCRFSR----QCVVDKDKRNQCRYCRLRKCFR 91
Query: 62 MGMNKDDAQHLKNSL 76
GM K+ Q+ ++ +
Sbjct: 92 AGMKKEAVQNERDRI 106
Score = 100 (40.3 bits), Expect = 0.00016, P = 0.00016
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+C+VDK RNQC+ CRL+KC GM K+
Sbjct: 70 QCVVDKDKRNQCRYCRLRKCFRAGMKKE 97
>UNIPROTKB|P13056 [details] [associations]
symbol:NR2C1 "Nuclear receptor subfamily 2 group C member
1" species:9606 "Homo sapiens" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0042803 "protein homodimerization activity" evidence=IEA]
[GO:0042826 "histone deacetylase binding" evidence=IEA] [GO:0048386
"positive regulation of retinoic acid receptor signaling pathway"
evidence=IEA] [GO:0016605 "PML body" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0003677 "DNA binding"
evidence=TAS] [GO:0004872 "receptor activity" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005654 GO:GO:0046872
GO:GO:0003677 GO:GO:0016605 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
EMBL:CH471054 GO:GO:0003700 GO:GO:0000122 GO:GO:0048386
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0006367
Pathway_Interaction_DB:hdac_classi_pathway eggNOG:NOG297520
HOVERGEN:HBG008596 KO:K08543 CTD:7181 HOGENOM:HOG000013058
OrthoDB:EOG476JZT EMBL:M21985 EMBL:M29959 EMBL:M29960 EMBL:AK291319
EMBL:AC011598 EMBL:BC040141 IPI:IPI00019051 IPI:IPI00334759
IPI:IPI00798023 PIR:A31521 PIR:A36738 PIR:B36738
RefSeq:NP_001027458.1 RefSeq:NP_001120834.1 RefSeq:NP_003288.2
UniGene:Hs.108301 UniGene:Hs.707524 ProteinModelPortal:P13056
SMR:P13056 IntAct:P13056 STRING:P13056 PhosphoSite:P13056
DMDM:226693548 PRIDE:P13056 DNASU:7181 Ensembl:ENST00000330677
Ensembl:ENST00000333003 Ensembl:ENST00000393101 GeneID:7181
KEGG:hsa:7181 UCSC:uc001tdm.4 UCSC:uc001tdn.4 UCSC:uc001tdo.4
GeneCards:GC12M095414 HGNC:HGNC:7971 HPA:CAB010395 MIM:601529
neXtProt:NX_P13056 PharmGKB:PA31754 OMA:QNSNEMS PhylomeDB:P13056
ChEMBL:CHEMBL1961787 GenomeRNAi:7181 NextBio:28152 Bgee:P13056
CleanEx:HS_NR2C1 Genevestigator:P13056 GermOnline:ENSG00000120798
Uniprot:P13056
Length = 603
Score = 121 (47.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R I +N +C+ G+ CI++K HRN+CQ CRL++C+ G
Sbjct: 123 RHYGAVTCEGCKGFFKRSI----RKNLVYSCR-GSKDCIINKHHRNRCQYCRLQRCIAFG 177
Query: 64 MNKDDAQ 70
M +D Q
Sbjct: 178 MKQDSVQ 184
Score = 107 (42.7 bits), Expect = 4.6e-05, P = 4.6e-05
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 41 CIV--DKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRN 98
C+V DKA A + C G K + ++ +L+Y +C + CI++K HRN
Sbjct: 113 CVVCGDKASGRHYGAVTCEGC--KGFFK---RSIRKNLVY--SCRGSKD--CIINKHHRN 163
Query: 99 QCQACRLKKCLNMGMNKD 116
+CQ CRL++C+ GM +D
Sbjct: 164 RCQYCRLQRCIAFGMKQD 181
>UNIPROTKB|E2QX37 [details] [associations]
symbol:NR2C1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0048386 "positive regulation of retinoic acid
receptor signaling pathway" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0046872 GO:GO:0016605 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0048386 GeneTree:ENSGT00700000104390 KO:K08543 CTD:7181
OMA:QNSNEMS EMBL:AAEX03009951 RefSeq:XP_854792.1
ProteinModelPortal:E2QX37 Ensembl:ENSCAFT00000010109 GeneID:611980
KEGG:cfa:611980 NextBio:20897515 Uniprot:E2QX37
Length = 605
Score = 121 (47.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R I +N +C+ G+ CI++K HRN+CQ CRL++C+ G
Sbjct: 124 RHYGAVTCEGCKGFFKRSI----RKNLVYSCR-GSKDCIINKHHRNRCQYCRLQRCIAFG 178
Query: 64 MNKDDAQ 70
M +D Q
Sbjct: 179 MRQDSVQ 185
Score = 107 (42.7 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 41 CIV--DKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRN 98
C+V DKA A + C G K + ++ +L+Y +C + CI++K HRN
Sbjct: 114 CVVCGDKASGRHYGAVTCEGC--KGFFK---RSIRKNLVY--SCRGSKD--CIINKHHRN 164
Query: 99 QCQACRLKKCLNMGMNKD 116
+CQ CRL++C+ GM +D
Sbjct: 165 RCQYCRLQRCIAFGMRQD 182
>UNIPROTKB|F1SQP7 [details] [associations]
symbol:NR2C1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0048386 "positive regulation of retinoic acid receptor
signaling pathway" evidence=IEA] [GO:0042826 "histone deacetylase
binding" evidence=IEA] [GO:0042803 "protein homodimerization
activity" evidence=IEA] [GO:0016605 "PML body" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0046872 GO:GO:0016605 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0000122 GO:GO:0048386
GeneTree:ENSGT00700000104390 KO:K08543 OMA:QNSNEMS EMBL:FP236518
RefSeq:XP_003126756.1 Ensembl:ENSSSCT00000000986 GeneID:100516014
KEGG:ssc:100516014 Uniprot:F1SQP7
Length = 605
Score = 121 (47.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R I +N +C+ G+ CI++K HRN+CQ CRL++C+ G
Sbjct: 124 RHYGAVTCEGCKGFFKRSI----RKNLVYSCR-GSKDCIINKHHRNRCQYCRLQRCIAFG 178
Query: 64 MNKDDAQ 70
M +D Q
Sbjct: 179 MKQDSVQ 185
Score = 106 (42.4 bits), Expect = 6.0e-05, P = 6.0e-05
Identities = 28/87 (32%), Positives = 45/87 (51%)
Query: 32 QACQAGTGRCIV--DKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELR 89
Q G C+V D+A A + C G K + ++ +L+Y +C +
Sbjct: 105 QGPNKGFDLCVVCGDRASGRHYGAVTCEGC--KGFFK---RSIRKNLVY--SCRGSKD-- 155
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI++K HRN+CQ CRL++C+ GM +D
Sbjct: 156 CIINKHHRNRCQYCRLQRCIAFGMKQD 182
>UNIPROTKB|F1N0I2 [details] [associations]
symbol:NR2C1 "Nuclear receptor subfamily 2 group C member
1" species:9913 "Bos taurus" [GO:0048386 "positive regulation of
retinoic acid receptor signaling pathway" evidence=IEA] [GO:0042826
"histone deacetylase binding" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0016605 "PML body"
evidence=IEA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0046872 GO:GO:0016605 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0048386 GeneTree:ENSGT00700000104390 IPI:IPI00685366
UniGene:Bt.28215 OMA:QNSNEMS EMBL:DAAA02012799 PRIDE:F1N0I2
Ensembl:ENSBTAT00000023577 Uniprot:F1N0I2
Length = 608
Score = 121 (47.7 bits), Expect = 1.5e-06, P = 1.5e-06
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R I +N +C+ G+ CI++K HRN+CQ CRL++C+ G
Sbjct: 124 RHYGAVTCEGCKGFFKRSI----RKNLVYSCR-GSKDCIINKHHRNRCQYCRLQRCIAFG 178
Query: 64 MNKDDAQ 70
M +D Q
Sbjct: 179 MKQDSVQ 185
Score = 107 (42.7 bits), Expect = 4.7e-05, P = 4.7e-05
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 41 CIV--DKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRN 98
C+V DKA A + C G K + ++ +L+Y +C + CI++K HRN
Sbjct: 114 CVVCGDKASGRHYGAVTCEGC--KGFFK---RSIRKNLVY--SCRGSKD--CIINKHHRN 164
Query: 99 QCQACRLKKCLNMGMNKD 116
+CQ CRL++C+ GM +D
Sbjct: 165 RCQYCRLQRCIAFGMKQD 182
>UNIPROTKB|E1C7C2 [details] [associations]
symbol:HNF4G "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GeneTree:ENSGT00690000101777 OMA:ANYSEVL EMBL:AADN02024674
IPI:IPI00583810 ProteinModelPortal:E1C7C2
Ensembl:ENSGALT00000025271 Uniprot:E1C7C2
Length = 454
Score = 119 (46.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 26/75 (34%), Positives = 39/75 (52%)
Query: 2 TFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLN 61
T +H G + C+ R I +N C+ +C+VDK RNQC+ CRLKKC
Sbjct: 67 TGKHYGASSCDGCKGFFRRSI----RKNHVYTCRFSR-QCVVDKDKRNQCRYCRLKKCFR 121
Query: 62 MGMNKDDAQHLKNSL 76
GM K+ Q+ ++ +
Sbjct: 122 AGMKKEAVQNERDRI 136
Score = 103 (41.3 bits), Expect = 8.5e-05, P = 8.5e-05
Identities = 17/28 (60%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+C+VDK RNQC+ CRLKKC GM K+
Sbjct: 100 QCVVDKDKRNQCRYCRLKKCFRAGMKKE 127
>UNIPROTKB|E1BS38 [details] [associations]
symbol:HNF4beta "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00690000101777 EMBL:AADN02064359
EMBL:AADN02064360 EMBL:AADN02064361 EMBL:AADN02064362
IPI:IPI00820290 Ensembl:ENSGALT00000033724 Uniprot:E1BS38
Length = 456
Score = 119 (46.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 27/75 (36%), Positives = 41/75 (54%)
Query: 2 TFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLN 61
T +H G + C+ G R V K H C+ + +C++DK RNQC+ CRLKKC
Sbjct: 58 TGKHYGASSCDGCK-GFFRRSVRKNHVYSCRFSR----QCVIDKDKRNQCRYCRLKKCFR 112
Query: 62 MGMNKDDAQHLKNSL 76
GM K+ Q+ ++ +
Sbjct: 113 AGMKKEAVQNERDRI 127
Score = 102 (41.0 bits), Expect = 0.00011, P = 0.00011
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+C++DK RNQC+ CRLKKC GM K+
Sbjct: 91 QCVIDKDKRNQCRYCRLKKCFRAGMKKE 118
>UNIPROTKB|F1N848 [details] [associations]
symbol:HNF4beta "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000003 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00545 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00690000101777 OMA:EIEYIAL EMBL:AADN02064359
EMBL:AADN02064360 EMBL:AADN02064361 EMBL:AADN02064362
IPI:IPI00593954 Ensembl:ENSGALT00000009154
Ensembl:ENSGALT00000039029 Uniprot:F1N848
Length = 459
Score = 119 (46.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 27/75 (36%), Positives = 41/75 (54%)
Query: 2 TFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLN 61
T +H G + C+ G R V K H C+ + +C++DK RNQC+ CRLKKC
Sbjct: 69 TGKHYGASSCDGCK-GFFRRSVRKNHVYSCRFSR----QCVIDKDKRNQCRYCRLKKCFR 123
Query: 62 MGMNKDDAQHLKNSL 76
GM K+ Q+ ++ +
Sbjct: 124 AGMKKEAVQNERDRI 138
Score = 102 (41.0 bits), Expect = 0.00011, P = 0.00011
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+C++DK RNQC+ CRLKKC GM K+
Sbjct: 102 QCVIDKDKRNQCRYCRLKKCFRAGMKKE 129
>UNIPROTKB|E2R9K8 [details] [associations]
symbol:HNF4G "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 GeneTree:ENSGT00690000101777 OMA:ANYSEVL
EMBL:AAEX03015880 Ensembl:ENSCAFT00000013166 Uniprot:E2R9K8
Length = 462
Score = 119 (46.9 bits), Expect = 1.6e-06, P = 1.6e-06
Identities = 26/75 (34%), Positives = 42/75 (56%)
Query: 2 TFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLN 61
T +H G + C+ G R + K+H C+ + +C+VDK RNQC+ CRL+KC
Sbjct: 74 TGKHYGASSCDGCK-GFFRRSIRKSHVYSCRFSR----QCVVDKDKRNQCRYCRLRKCFR 128
Query: 62 MGMNKDDAQHLKNSL 76
GM K+ Q+ ++ +
Sbjct: 129 AGMKKEAVQNERDRI 143
Score = 100 (40.3 bits), Expect = 0.00018, P = 0.00018
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+C+VDK RNQC+ CRL+KC GM K+
Sbjct: 107 QCVVDKDKRNQCRYCRLRKCFRAGMKKE 134
>UNIPROTKB|F6Y5T4 [details] [associations]
symbol:NR2F2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GeneTree:ENSGT00670000097509 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
Ensembl:ENSCAFT00000024577 EMBL:AAEX03026796 OMA:NDQVALL
Uniprot:F6Y5T4
Length = 414
Score = 118 (46.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 28/65 (43%), Positives = 38/65 (58%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQHL 72
TC+ G + +N CQA C VD+ RNQCQ CRLKKC+++GM K +A H
Sbjct: 95 TCE-GCKSFFKRSVGKNLTFTCQANQD-CRVDQYRRNQCQFCRLKKCIDVGM-KREAVH- 150
Query: 73 KNSLL 77
+N +L
Sbjct: 151 RNRML 155
Score = 99 (39.9 bits), Expect = 0.00020, P = 0.00020
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C VD+ RNQCQ CRLKKC+++GM ++
Sbjct: 121 CRVDQYRRNQCQFCRLKKCIDVGMKRE 147
>UNIPROTKB|E2R3A8 [details] [associations]
symbol:E2R3A8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 ProteinModelPortal:E2R3A8 Ensembl:ENSCAFT00000024577
Uniprot:E2R3A8
Length = 415
Score = 118 (46.6 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 28/65 (43%), Positives = 38/65 (58%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQHL 72
TC+ G + +N CQA C VD+ RNQCQ CRLKKC+++GM K +A H
Sbjct: 96 TCE-GCKSFFKRSVGKNLTFTCQANQD-CRVDQYRRNQCQFCRLKKCIDVGM-KREAVH- 151
Query: 73 KNSLL 77
+N +L
Sbjct: 152 RNRML 156
Score = 99 (39.9 bits), Expect = 0.00020, P = 0.00020
Identities = 16/27 (59%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C VD+ RNQCQ CRLKKC+++GM ++
Sbjct: 122 CRVDQYRRNQCQFCRLKKCIDVGMKRE 148
>UNIPROTKB|Q53AD2 [details] [associations]
symbol:ESR1 "Estrogen receptor" species:9685 "Felis catus"
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=ISS] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0045429 "positive regulation of nitric oxide
biosynthetic process" evidence=ISS] [GO:0051000 "positive
regulation of nitric-oxide synthase activity" evidence=ISS]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR000536
InterPro:IPR001292 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 Pfam:PF02159 PIRSF:PIRSF002527
PIRSF:PIRSF500101 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00543
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005886 GO:GO:0005634 GO:GO:0005794 GO:GO:0051091
GO:GO:0005496 GO:GO:0046872 GO:GO:0051000 GO:GO:0043565
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0043124 GO:GO:0043433
GO:GO:0045429 HOVERGEN:HBG108344 CTD:2099 GO:GO:0030284
InterPro:IPR024736 Pfam:PF12743 EMBL:AY605260 RefSeq:NP_001019402.1
ProteinModelPortal:Q53AD2 SMR:Q53AD2 GeneID:552888 KEGG:fca:552888
Uniprot:Q53AD2
Length = 595
Score = 108 (43.1 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 196 HYGVWSCEGCKAFFKRSI--QGHNDYM--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 250
Query: 65 NK 66
K
Sbjct: 251 MK 252
Score = 97 (39.2 bits), Expect = 0.00054, P = 0.00054
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 226 QCTIDKNRRKSCQACRLRKCYEVGMMKGG 254
Score = 34 (17.0 bits), Expect = 1.8e-06, Sum P(2) = 1.8e-06
Identities = 13/41 (31%), Positives = 19/41 (46%)
Query: 70 QHLKNS---LLYEFACTNLVELRCIVDK---AHRNQCQACR 104
+H+ N LY C N+V L ++ + AHR A R
Sbjct: 515 RHMSNKGMEHLYNMKCKNVVPLYDLLLEMLDAHRLHAPANR 555
>RGD|3200 [details] [associations]
symbol:Nr2c1 "nuclear receptor subfamily 2, group C, member 1"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0016605 "PML body" evidence=IEA] [GO:0042803 "protein
homodimerization activity" evidence=IEA] [GO:0042826 "histone
deacetylase binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0048386 "positive regulation of retinoic
acid receptor signaling pathway" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:3200 GO:GO:0046872 GO:GO:0016605 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0048386 EMBL:CH473960 HSSP:P03372 eggNOG:NOG297520
GeneTree:ENSGT00700000104390 KO:K08543 CTD:7181 HOGENOM:HOG000013058
OrthoDB:EOG476JZT OMA:QNSNEMS EMBL:L26398 EMBL:BC061822
IPI:IPI00208150 RefSeq:NP_665723.1 UniGene:Rn.79894
ProteinModelPortal:Q8VIJ4 SMR:Q8VIJ4 STRING:Q8VIJ4 PhosphoSite:Q8VIJ4
PRIDE:Q8VIJ4 Ensembl:ENSRNOT00000009578 GeneID:252924 KEGG:rno:252924
UCSC:RGD:3200 InParanoid:Q8VIJ4 NextBio:624089 ArrayExpress:Q8VIJ4
Genevestigator:Q8VIJ4 Uniprot:Q8VIJ4
Length = 590
Score = 120 (47.3 bits), Expect = 1.8e-06, P = 1.8e-06
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R I +N +C+ G+ CI++K HRN+CQ CRL++C+ G
Sbjct: 111 RHYGAITCEGCKGFFKRSI----RKNLVYSCR-GSKDCIINKHHRNRCQYCRLQRCIAFG 165
Query: 64 MNKDDAQ 70
M +D Q
Sbjct: 166 MKQDSVQ 172
Score = 107 (42.7 bits), Expect = 4.5e-05, P = 4.5e-05
Identities = 27/78 (34%), Positives = 43/78 (55%)
Query: 41 CIV--DKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRN 98
C+V DKA A + C G K + ++ +L+Y +C + CI++K HRN
Sbjct: 101 CVVCGDKASGRHYGAITCEGC--KGFFK---RSIRKNLVY--SCRGSKD--CIINKHHRN 151
Query: 99 QCQACRLKKCLNMGMNKD 116
+CQ CRL++C+ GM +D
Sbjct: 152 RCQYCRLQRCIAFGMKQD 169
>FB|FBgn0015239 [details] [associations]
symbol:Hr78 "Hormone-receptor-like in 78" species:7227
"Drosophila melanogaster" [GO:0000977 "RNA polymerase II regulatory
region sequence-specific DNA binding" evidence=IDA] [GO:0005634
"nucleus" evidence=ISS;NAS;IDA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS;IDA;TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=NAS;TAS]
[GO:0035071 "salivary gland cell autophagic cell death"
evidence=IEP] [GO:0048102 "autophagic cell death" evidence=IEP]
[GO:0007424 "open tracheal system development" evidence=IMP]
[GO:0035002 "liquid clearance, open tracheal system" evidence=IMP]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 EMBL:AE014296
GO:GO:0022008 GO:GO:0046872 GO:GO:0004879 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0035071 GO:GO:0000977 GO:GO:0035002 EMBL:U36791 EMBL:U31517
EMBL:AY058317 RefSeq:NP_001189151.1 RefSeq:NP_001189152.1
RefSeq:NP_524203.2 RefSeq:NP_730636.1 RefSeq:NP_730637.1
RefSeq:NP_996137.1 UniGene:Dm.6935 ProteinModelPortal:Q24142
SMR:Q24142 MINT:MINT-1578940 STRING:Q24142
EnsemblMetazoa:FBtr0078389 EnsemblMetazoa:FBtr0078390
EnsemblMetazoa:FBtr0078392 EnsemblMetazoa:FBtr0303653
EnsemblMetazoa:FBtr0303654 GeneID:40378 KEGG:dme:Dmel_CG7199
CTD:40378 FlyBase:FBgn0015239 eggNOG:NOG297520
GeneTree:ENSGT00700000104390 InParanoid:Q24142 KO:K14031
OMA:GAMNCEV OrthoDB:EOG4G1JZH PhylomeDB:Q24142 GenomeRNAi:40378
NextBio:818471 Bgee:Q24142 GermOnline:CG7199 Uniprot:Q24142
Length = 601
Score = 120 (47.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 29/74 (39%), Positives = 37/74 (50%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R I K QC+ G C V K HRN+CQ CRL+KCL G
Sbjct: 62 RHYGAISCEGCKGFFKRSI-RKQLGYQCR----GAMNCEVTKHHRNRCQFCRLQKCLASG 116
Query: 64 MNKDDAQHLKNSLL 77
M D QH + ++
Sbjct: 117 MRSDSVQHERKPIV 130
Score = 97 (39.2 bits), Expect = 0.00055, P = 0.00055
Identities = 17/29 (58%), Positives = 20/29 (68%)
Query: 88 LRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+ C V K HRN+CQ CRL+KCL GM D
Sbjct: 92 MNCEVTKHHRNRCQFCRLQKCLASGMRSD 120
>UNIPROTKB|A0JNE3 [details] [associations]
symbol:NR2C1 "Nuclear receptor subfamily 2 group C member
1" species:9913 "Bos taurus" [GO:0016605 "PML body" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0046872 GO:GO:0016605 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 eggNOG:NOG297520 KO:K08543
EMBL:BC126643 IPI:IPI00685366 RefSeq:NP_001071372.1
UniGene:Bt.28215 ProteinModelPortal:A0JNE3 SMR:A0JNE3 STRING:A0JNE3
GeneID:511407 KEGG:bta:511407 CTD:7181 HOGENOM:HOG000013058
InParanoid:A0JNE3 OrthoDB:EOG476JZT NextBio:20869910 Uniprot:A0JNE3
Length = 608
Score = 120 (47.3 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 25/67 (37%), Positives = 38/67 (56%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R I +N +C+ G+ CI++K HRN+CQ CRL++C+ G
Sbjct: 124 RHYGEVTCEGCKGFFKRSI----RKNLVYSCR-GSKDCIINKHHRNRCQYCRLQRCIAFG 178
Query: 64 MNKDDAQ 70
M +D Q
Sbjct: 179 MKQDSVQ 185
Score = 102 (41.0 bits), Expect = 0.00016, P = 0.00016
Identities = 18/45 (40%), Positives = 31/45 (68%)
Query: 72 LKNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
++ +L+Y +C + CI++K HRN+CQ CRL++C+ GM +D
Sbjct: 142 IRKNLVY--SCRGSKD--CIINKHHRNRCQYCRLQRCIAFGMKQD 182
>UNIPROTKB|D4A187 [details] [associations]
symbol:Esr2 "Estrogen receptor beta" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR001628
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00105 PIRSF:PIRSF002527 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 RGD:2582 GO:GO:0005634 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 InterPro:IPR021064 Pfam:PF12497 IPI:IPI00565586
ProteinModelPortal:D4A187 Ensembl:ENSRNOT00000047664
ArrayExpress:D4A187 Uniprot:D4A187
Length = 439
Score = 118 (46.6 bits), Expect = 1.9e-06, P = 1.9e-06
Identities = 34/106 (32%), Positives = 54/106 (50%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 160 HYGVWSCEGCKAFFKRSI--QGHNDYI--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 214
Query: 65 NKDDAQHLKNSL-LYEFACTNLVELRCIVDKAHRNQCQACRLKKCL 109
K ++ + + ++ ++ C+ KA RN A R+K+ L
Sbjct: 215 VKCGSRRERCGYRIVRRQRSSSEQVHCL-SKAKRNGGHAPRVKELL 259
Score = 94 (38.1 bits), Expect = 0.00075, P = 0.00075
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 190 QCTIDKNRRKSCQACRLRKCYEVGMVKCG 218
>WB|WBGene00021848 [details] [associations]
symbol:nhr-239 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
GO:GO:0003700 GO:GO:0006351 EMBL:FO081806
GeneTree:ENSGT00700000104390 EMBL:FO081807 RefSeq:NP_497579.3
ProteinModelPortal:Q9BKZ8 SMR:Q9BKZ8 EnsemblMetazoa:Y54F10AM.1
GeneID:190264 KEGG:cel:CELE_Y54F10AM.1 UCSC:Y54F10AM.1 CTD:190264
WormBase:Y54F10AM.1 eggNOG:NOG310907 HOGENOM:HOG000214264
InParanoid:Q9BKZ8 OMA:CEICGDK Uniprot:Q9BKZ8
Length = 262
Score = 114 (45.2 bits), Expect = 2.0e-06, P = 2.0e-06
Identities = 24/63 (38%), Positives = 32/63 (50%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G+ C +R + +N C AG +C+VDK RN C ACRL KC +
Sbjct: 21 RHYGVWACDGCSCFFKRSV----RKNIIYTCIAGNWKCVVDKGRRNWCPACRLAKCTRLK 76
Query: 64 MNK 66
MN+
Sbjct: 77 MNR 79
Score = 93 (37.8 bits), Expect = 0.00042, P = 0.00042
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNK 115
+C+VDK RN C ACRL KC + MN+
Sbjct: 53 KCVVDKGRRNWCPACRLAKCTRLKMNR 79
>ZFIN|ZDB-GENE-030131-2730 [details] [associations]
symbol:hnf4b "hepatic nuclear factor 4, beta"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043401 "steroid hormone mediated signaling pathway"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-030131-2730 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOVERGEN:HBG005606 eggNOG:NOG241134 HSSP:P11473
EMBL:BC065657 IPI:IPI00509611 RefSeq:NP_991109.1 UniGene:Dr.6336
ProteinModelPortal:Q6P0E0 SMR:Q6P0E0 GeneID:324010 KEGG:dre:324010
CTD:324010 NextBio:20808536 Uniprot:Q6P0E0
Length = 465
Score = 118 (46.6 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 27/75 (36%), Positives = 41/75 (54%)
Query: 2 TFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLN 61
T +H G + C+ G R V K H C+ + +C+VDK RNQC+ CRL+KC
Sbjct: 71 TGKHYGASSCDGCK-GFFRRSVRKNHAYTCRFSR----QCVVDKDKRNQCRYCRLRKCFR 125
Query: 62 MGMNKDDAQHLKNSL 76
GM K+ Q+ ++ +
Sbjct: 126 AGMRKEAVQNERDRI 140
Score = 101 (40.6 bits), Expect = 0.00014, P = 0.00014
Identities = 19/44 (43%), Positives = 26/44 (59%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+ S+ A T +C+VDK RNQC+ CRL+KC GM K+
Sbjct: 88 RRSVRKNHAYTCRFSRQCVVDKDKRNQCRYCRLRKCFRAGMRKE 131
>FB|FBgn0004914 [details] [associations]
symbol:Hnf4 "Hepatocyte nuclear factor 4" species:7227
"Drosophila melanogaster" [GO:0005634 "nucleus" evidence=ISS;NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS;NAS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS] [GO:0007498 "mesoderm
development" evidence=NAS] [GO:0007492 "endoderm development"
evidence=NAS] [GO:0008610 "lipid biosynthetic process"
evidence=NAS] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016042 "lipid catabolic process" evidence=IDA]
[GO:0034440 "lipid oxidation" evidence=IDA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
EMBL:AE014134 GO:GO:0016042 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 eggNOG:NOG241134
GeneTree:ENSGT00690000101777 EMBL:U70874 PIR:S36218
RefSeq:NP_723414.1 UniGene:Dm.4524 ProteinModelPortal:P49866
SMR:P49866 MINT:MINT-1331960 STRING:P49866 PaxDb:P49866
EnsemblMetazoa:FBtr0079749 GeneID:44544 KEGG:dme:Dmel_CG9310
CTD:44544 FlyBase:FBgn0004914 InParanoid:P49866 KO:K08704
OrthoDB:EOG4Z08MV GenomeRNAi:44544 NextBio:837399 Bgee:P49866
GermOnline:CG9310 GO:GO:0034440 Uniprot:P49866
Length = 666
Score = 120 (47.3 bits), Expect = 2.1e-06, P = 2.1e-06
Identities = 27/75 (36%), Positives = 41/75 (54%)
Query: 2 TFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLN 61
T +H G + C+ G R V K H+ C+ + C+VDK RNQC+ CRL+KC
Sbjct: 112 TGKHYGASSCDGCK-GFFRRSVRKNHQYTCRFAR----NCVVDKDKRNQCRYCRLRKCFK 166
Query: 62 MGMNKDDAQHLKNSL 76
GM K+ Q+ ++ +
Sbjct: 167 AGMKKEAVQNERDRI 181
Score = 99 (39.9 bits), Expect = 0.00038, P = 0.00038
Identities = 16/27 (59%), Positives = 20/27 (74%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C+VDK RNQC+ CRL+KC GM K+
Sbjct: 146 CVVDKDKRNQCRYCRLRKCFKAGMKKE 172
>UNIPROTKB|D4A4T1 [details] [associations]
symbol:Esr2 "Estrogen receptor beta" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:2582 GO:GO:0005634
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 InterPro:IPR021064 Pfam:PF12497
IPI:IPI00568681 Ensembl:ENSRNOT00000044282 ArrayExpress:D4A4T1
Uniprot:D4A4T1
Length = 484
Score = 118 (46.6 bits), Expect = 2.2e-06, P = 2.2e-06
Identities = 34/106 (32%), Positives = 54/106 (50%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 160 HYGVWSCEGCKAFFKRSI--QGHNDYI--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 214
Query: 65 NKDDAQHLKNSL-LYEFACTNLVELRCIVDKAHRNQCQACRLKKCL 109
K ++ + + ++ ++ C+ KA RN A R+K+ L
Sbjct: 215 VKCGSRRERCGYRIVRRQRSSSEQVHCL-SKAKRNGGHAPRVKELL 259
Score = 94 (38.1 bits), Expect = 0.00086, P = 0.00086
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 190 QCTIDKNRRKSCQACRLRKCYEVGMVKCG 218
>UNIPROTKB|Q9TV98 [details] [associations]
symbol:ESR1 "Estrogen receptor" species:9796 "Equus
caballus" [GO:0043124 "negative regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=ISS] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0045429 "positive regulation of nitric
oxide biosynthetic process" evidence=ISS] [GO:0051000 "positive
regulation of nitric-oxide synthase activity" evidence=ISS]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISS] InterPro:IPR000536
InterPro:IPR001292 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 Pfam:PF02159 PIRSF:PIRSF002527
PIRSF:PIRSF500101 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00543
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005886 GO:GO:0005634 GO:GO:0005794 GO:GO:0051091
GO:GO:0005496 GO:GO:0046872 GO:GO:0051000 GO:GO:0043565
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GO:GO:0043124 GO:GO:0043433
GO:GO:0045429 HOVERGEN:HBG108344 CTD:2099 eggNOG:NOG320746
HOGENOM:HOG000233468 KO:K08550 OrthoDB:EOG4JM7PP GO:GO:0030284
InterPro:IPR024736 Pfam:PF12743 EMBL:AF124093 RefSeq:NP_001075241.1
UniGene:Eca.13034 ProteinModelPortal:Q9TV98 SMR:Q9TV98
STRING:Q9TV98 GeneID:791249 KEGG:ecb:791249 InParanoid:Q9TV98
Uniprot:Q9TV98
Length = 594
Score = 108 (43.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 196 HYGVWSCEGCKAFFKRSI--QGHNDYM--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 250
Query: 65 NK 66
K
Sbjct: 251 MK 252
Score = 97 (39.2 bits), Expect = 0.00054, P = 0.00054
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 226 QCTIDKNRRKSCQACRLRKCYEVGMMKGG 254
Score = 33 (16.7 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 70 QHLKNS---LLYEFACTNLVEL 88
+H+ N LY C N+V L
Sbjct: 514 RHMSNKGMEHLYSMKCKNVVPL 535
>UNIPROTKB|P03372 [details] [associations]
symbol:ESR1 "Estrogen receptor" species:9606 "Homo sapiens"
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0016021 "integral to membrane"
evidence=IEA] [GO:0001547 "antral ovarian follicle growth"
evidence=IEA] [GO:0002064 "epithelial cell development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0008209 "androgen metabolic process" evidence=IEA] [GO:0008584
"male gonad development" evidence=IEA] [GO:0042981 "regulation of
apoptotic process" evidence=IEA] [GO:0048146 "positive regulation
of fibroblast proliferation" evidence=IEA] [GO:0060065 "uterus
development" evidence=IEA] [GO:0060068 "vagina development"
evidence=IEA] [GO:0060523 "prostate epithelial cord elongation"
evidence=IEA] [GO:0060527 "prostate epithelial cord arborization
involved in prostate glandular acinus morphogenesis" evidence=IEA]
[GO:0060687 "regulation of branching involved in prostate gland
morphogenesis" evidence=IEA] [GO:0060745 "mammary gland branching
involved in pregnancy" evidence=IEA] [GO:0060749 "mammary gland
alveolus development" evidence=IEA] [GO:0060750 "epithelial cell
proliferation involved in mammary gland duct elongation"
evidence=IEA] [GO:0071391 "cellular response to estrogen stimulus"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=NAS] [GO:0016020 "membrane"
evidence=NAS] [GO:0005886 "plasma membrane" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] [GO:0030284 "estrogen receptor activity"
evidence=NAS] [GO:0030235 "nitric-oxide synthase regulator
activity" evidence=NAS] [GO:0034056 "estrogen response element
binding" evidence=IDA] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0045429 "positive regulation of nitric oxide biosynthetic
process" evidence=IDA] [GO:0051000 "positive regulation of
nitric-oxide synthase activity" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=IDA] [GO:0043124 "negative regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IDA] [GO:0010629 "negative
regulation of gene expression" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0043433 "negative regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IDA] [GO:0043627 "response to estrogen stimulus"
evidence=IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=TAS] [GO:0006351 "transcription, DNA-dependent"
evidence=TAS] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0038052 "estrogen-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IGI]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0042802 "identical
protein binding" evidence=IPI] [GO:0048386 "positive regulation of
retinoic acid receptor signaling pathway" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0008013 "beta-catenin binding" evidence=IPI]
[GO:0032355 "response to estradiol stimulus" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001292
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105
Pfam:PF02159 PIRSF:PIRSF002527 PIRSF:PIRSF500101 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00543 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0016021 GO:GO:0005886
GO:GO:0005794 GO:GO:0048471
Pathway_Interaction_DB:hdac_classii_pathway Reactome:REACT_111102
Pathway_Interaction_DB:telomerasepathway GO:GO:0005654
GO:GO:0051091 GO:GO:0042981 GO:GO:0005496 GO:GO:0032355
GO:GO:0046872 Pathway_Interaction_DB:p38alphabetadownstreampathway
EMBL:CH471051 GO:GO:0051000 GO:GO:0043204 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
Pathway_Interaction_DB:hnf3apathway GO:GO:0070374 GO:GO:0045944
GO:GO:0042562 GO:GO:0043195 GO:GO:0003682 GO:GO:0030315
GO:GO:0002076 DrugBank:DB00506 GO:GO:0043124 GO:GO:0008209
GO:GO:0010629 DrugBank:DB00481 GO:GO:0043433 GO:GO:0045742
GO:GO:0060749 GO:GO:0045429 GO:GO:0048146
Pathway_Interaction_DB:er_nongenomic_pathway
Pathway_Interaction_DB:smad2_3nuclearpathway GO:GO:0030235
GO:GO:0048386 DrugBank:DB00655 DrugBank:DB00858 DrugBank:DB01185
GO:GO:0006367 GO:GO:0060750 GO:GO:0016585
Pathway_Interaction_DB:foxm1pathway GO:GO:0060011 GO:GO:0002064
GO:GO:0060068 GO:GO:0001046 DrugBank:DB01065 GO:GO:0071391
GO:GO:0060687 PDB:2LLO PDB:2LLQ PDBsum:2LLO PDBsum:2LLQ
DrugBank:DB01406 GO:GO:0001547 DrugBank:DB00286 DrugBank:DB00255
DrugBank:DB00603 DrugBank:DB00396 DrugBank:DB01006 DrugBank:DB00783
DrugBank:DB00977 DrugBank:DB00304 DrugBank:DB00675 DrugBank:DB01395
DrugBank:DB00294 DrugBank:DB00947 DrugBank:DB00539 DrugBank:DB04573
DrugBank:DB01183 HOVERGEN:HBG108344 CTD:2099 eggNOG:NOG320746
KO:K08550 OrthoDB:EOG4JM7PP InterPro:IPR024736 Pfam:PF12743
EMBL:X03635 EMBL:M12674 EMBL:U47678 EMBL:AY425004 EMBL:BX640939
EMBL:AL356311 EMBL:AL049821 EMBL:AL078582 EMBL:AL590993
EMBL:BC128573 EMBL:BC128574 EMBL:AH008151 EMBL:X73067 EMBL:Z75126
IPI:IPI00218352 IPI:IPI00294982 IPI:IPI00914643 IPI:IPI01018719
PIR:S64737 RefSeq:NP_000116.2 RefSeq:NP_001116212.1
RefSeq:NP_001116213.1 RefSeq:NP_001116214.1 UniGene:Hs.208124
PDB:1A52 PDB:1AKF PDB:1ERE PDB:1ERR PDB:1G50 PDB:1GWQ PDB:1GWR
PDB:1HCP PDB:1HCQ PDB:1L2I PDB:1PCG PDB:1QKT PDB:1QKU PDB:1R5K
PDB:1SJ0 PDB:1UOM PDB:1X7E PDB:1X7R PDB:1XP1 PDB:1XP6 PDB:1XP9
PDB:1XPC PDB:1XQC PDB:1YIM PDB:1YIN PDB:1ZKY PDB:2AYR PDB:2B1V
PDB:2B1Z PDB:2B23 PDB:2BJ4 PDB:2FAI PDB:2G44 PDB:2G5O PDB:2I0J
PDB:2IOG PDB:2IOK PDB:2JF9 PDB:2JFA PDB:2OCF PDB:2OUZ PDB:2P15
PDB:2POG PDB:2Q6J PDB:2Q70 PDB:2QA6 PDB:2QA8 PDB:2QAB PDB:2QE4
PDB:2QGT PDB:2QGW PDB:2QH6 PDB:2QR9 PDB:2QSE PDB:2QXM PDB:2QXS
PDB:2QZO PDB:2R6W PDB:2R6Y PDB:2YAT PDB:2YJA PDB:3CBM PDB:3CBO
PDB:3CBP PDB:3DT3 PDB:3ERD PDB:3ERT PDB:3HLV PDB:3HM1 PDB:3L03
PDB:3OS8 PDB:3OS9 PDB:3OSA PDB:3Q95 PDB:3Q97 PDB:3UU7 PDB:3UUA
PDB:3UUC PDB:3UUD PDB:4AA6 PDB:4DMA PDBsum:1A52 PDBsum:1AKF
PDBsum:1ERE PDBsum:1ERR PDBsum:1G50 PDBsum:1GWQ PDBsum:1GWR
PDBsum:1HCP PDBsum:1HCQ PDBsum:1L2I PDBsum:1PCG PDBsum:1QKT
PDBsum:1QKU PDBsum:1R5K PDBsum:1SJ0 PDBsum:1UOM PDBsum:1X7E
PDBsum:1X7R PDBsum:1XP1 PDBsum:1XP6 PDBsum:1XP9 PDBsum:1XPC
PDBsum:1XQC PDBsum:1YIM PDBsum:1YIN PDBsum:1ZKY PDBsum:2AYR
PDBsum:2B1V PDBsum:2B1Z PDBsum:2B23 PDBsum:2BJ4 PDBsum:2FAI
PDBsum:2G44 PDBsum:2G5O PDBsum:2I0J PDBsum:2IOG PDBsum:2IOK
PDBsum:2JF9 PDBsum:2JFA PDBsum:2OCF PDBsum:2OUZ PDBsum:2P15
PDBsum:2POG PDBsum:2Q6J PDBsum:2Q70 PDBsum:2QA6 PDBsum:2QA8
PDBsum:2QAB PDBsum:2QE4 PDBsum:2QGT PDBsum:2QGW PDBsum:2QH6
PDBsum:2QR9 PDBsum:2QSE PDBsum:2QXM PDBsum:2QXS PDBsum:2QZO
PDBsum:2R6W PDBsum:2R6Y PDBsum:2YAT PDBsum:2YJA PDBsum:3CBM
PDBsum:3CBO PDBsum:3CBP PDBsum:3DT3 PDBsum:3ERD PDBsum:3ERT
PDBsum:3HLV PDBsum:3HM1 PDBsum:3L03 PDBsum:3OS8 PDBsum:3OS9
PDBsum:3OSA PDBsum:3Q95 PDBsum:3Q97 PDBsum:3UU7 PDBsum:3UUA
PDBsum:3UUC PDBsum:3UUD PDBsum:4AA6 PDBsum:4DMA DisProt:DP00074
ProteinModelPortal:P03372 SMR:P03372 DIP:DIP-5965N IntAct:P03372
MINT:MINT-129047 STRING:P03372 GlycoSuiteDB:P03372
PhosphoSite:P03372 DMDM:544257 PaxDb:P03372 PRIDE:P03372 DNASU:2099
Ensembl:ENST00000206249 Ensembl:ENST00000338799
Ensembl:ENST00000440973 Ensembl:ENST00000443427
Ensembl:ENST00000456483 GeneID:2099 KEGG:hsa:2099 UCSC:uc003qom.4
GeneCards:GC06P151980 HGNC:HGNC:3467 HPA:CAB000037 HPA:HPA000449
HPA:HPA000450 MIM:133430 neXtProt:NX_P03372 Orphanet:785
PharmGKB:PA156 InParanoid:P03372 PhylomeDB:P03372 BindingDB:P03372
ChEMBL:CHEMBL206 ChiTaRS:ESR1 DrugBank:DB00269 DrugBank:DB00882
DrugBank:DB00890 DrugBank:DB01196 DrugBank:DB00823 DrugBank:DB00367
DrugBank:DB00351 DrugBank:DB01357 DrugBank:DB00957 DrugBank:DB04575
EvolutionaryTrace:P03372 GenomeRNAi:2099 NextBio:8491
ArrayExpress:P03372 Bgee:P03372 CleanEx:HS_ESR1
Genevestigator:P03372 GermOnline:ENSG00000091831 GO:GO:0044429
GO:GO:0034056 GO:GO:0038052 GO:GO:0060745 GO:GO:0060527
GO:GO:0060523 GO:GO:0060065 Uniprot:P03372
Length = 595
Score = 108 (43.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 196 HYGVWSCEGCKAFFKRSI--QGHNDYM--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 250
Query: 65 NK 66
K
Sbjct: 251 MK 252
Score = 97 (39.2 bits), Expect = 0.00054, P = 0.00054
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 226 QCTIDKNRRKSCQACRLRKCYEVGMMKGG 254
Score = 33 (16.7 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 70 QHLKNS---LLYEFACTNLVEL 88
+H+ N LY C N+V L
Sbjct: 515 RHMSNKGMEHLYSMKCKNVVPL 536
>UNIPROTKB|Q29040 [details] [associations]
symbol:ESR1 "Estrogen receptor" species:9823 "Sus scrofa"
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0043124 "negative regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=ISS] [GO:0051000
"positive regulation of nitric-oxide synthase activity"
evidence=ISS] [GO:0045429 "positive regulation of nitric oxide
biosynthetic process" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0030284 "estrogen receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001292
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105
Pfam:PF02159 PIRSF:PIRSF002527 PIRSF:PIRSF500101 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00543 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005886 GO:GO:0005634
GO:GO:0005794 GO:GO:0051091 GO:GO:0005496 GO:GO:0046872
GO:GO:0051000 GO:GO:0043565 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GO:GO:0043124 GO:GO:0043433 GO:GO:0045429 HOVERGEN:HBG108344
CTD:2099 eggNOG:NOG320746 KO:K08550 OrthoDB:EOG4JM7PP GO:GO:0030284
InterPro:IPR024736 Pfam:PF12743 EMBL:Z37167 PIR:I47140
RefSeq:NP_999385.1 UniGene:Ssc.16144 UniGene:Ssc.82478
ProteinModelPortal:Q29040 SMR:Q29040 STRING:Q29040 GeneID:397435
KEGG:ssc:397435 HOGENOM:HOG000152618 Uniprot:Q29040
Length = 595
Score = 108 (43.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 196 HYGVWSCEGCKAFFKRSI--QGHNDYM--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 250
Query: 65 NK 66
K
Sbjct: 251 MK 252
Score = 97 (39.2 bits), Expect = 0.00054, P = 0.00054
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 226 QCTIDKNRRKSCQACRLRKCYEVGMMKGG 254
Score = 33 (16.7 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 70 QHLKNS---LLYEFACTNLVEL 88
+H+ N LY C N+V L
Sbjct: 515 RHMSNKGMEHLYNMKCKNVVPL 536
>UNIPROTKB|F1MX59 [details] [associations]
symbol:ESR1 "Estrogen receptor" species:9913 "Bos taurus"
[GO:0071391 "cellular response to estrogen stimulus" evidence=IEA]
[GO:0060750 "epithelial cell proliferation involved in mammary
gland duct elongation" evidence=IEA] [GO:0060749 "mammary gland
alveolus development" evidence=IEA] [GO:0060745 "mammary gland
branching involved in pregnancy" evidence=IEA] [GO:0060687
"regulation of branching involved in prostate gland morphogenesis"
evidence=IEA] [GO:0060527 "prostate epithelial cord arborization
involved in prostate glandular acinus morphogenesis" evidence=IEA]
[GO:0060523 "prostate epithelial cord elongation" evidence=IEA]
[GO:0060068 "vagina development" evidence=IEA] [GO:0060065 "uterus
development" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0051000 "positive regulation of nitric-oxide
synthase activity" evidence=IEA] [GO:0048386 "positive regulation
of retinoic acid receptor signaling pathway" evidence=IEA]
[GO:0048146 "positive regulation of fibroblast proliferation"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045429
"positive regulation of nitric oxide biosynthetic process"
evidence=IEA] [GO:0043433 "negative regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0043124 "negative regulation of I-kappaB kinase/NF-kappaB
cascade" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0042802 "identical protein binding"
evidence=IEA] [GO:0038052 "estrogen-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0034056 "estrogen response element binding"
evidence=IEA] [GO:0010629 "negative regulation of gene expression"
evidence=IEA] [GO:0008584 "male gonad development" evidence=IEA]
[GO:0008209 "androgen metabolic process" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0002064 "epithelial cell development"
evidence=IEA] [GO:0001547 "antral ovarian follicle growth"
evidence=IEA] [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001292 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 Pfam:PF02159 PIRSF:PIRSF002527
PIRSF:PIRSF500101 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00543
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005886 GO:GO:0005634 GO:GO:0005737 GO:GO:0051091
GO:GO:0042981 GO:GO:0005496 GO:GO:0046872 GO:GO:0051000
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003682 GO:GO:0008584 GO:GO:0043124
GO:GO:0008209 GO:GO:0010629 GO:GO:0043433 GO:GO:0060749
GO:GO:0045429 GO:GO:0048146 GO:GO:0048386
GeneTree:ENSGT00700000104072 GO:GO:0060750 GO:GO:0030520
GO:GO:0002064 GO:GO:0060068 GO:GO:0001046 GO:GO:0071391
GO:GO:0060687 GO:GO:0001547 InterPro:IPR024736 Pfam:PF12743
GO:GO:0034056 GO:GO:0038052 GO:GO:0060745 GO:GO:0060527
GO:GO:0060523 GO:GO:0060065 OMA:YRPSSDN EMBL:DAAA02027184
EMBL:DAAA02027176 EMBL:DAAA02027177 EMBL:DAAA02027178
EMBL:DAAA02027179 EMBL:DAAA02027180 EMBL:DAAA02027181
EMBL:DAAA02027182 EMBL:DAAA02027183 IPI:IPI00906143
Ensembl:ENSBTAT00000009422 Uniprot:F1MX59
Length = 596
Score = 108 (43.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 197 HYGVWSCEGCKAFFKRSI--QGHNDYM--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 251
Query: 65 NK 66
K
Sbjct: 252 MK 253
Score = 97 (39.2 bits), Expect = 0.00054, P = 0.00054
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 227 QCTIDKNRRKSCQACRLRKCYEVGMMKGG 255
Score = 33 (16.7 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 70 QHLKNS---LLYEFACTNLVEL 88
+H+ N LY C N+V L
Sbjct: 516 RHMSNKGMEHLYSMKCKNVVPL 537
>UNIPROTKB|P49884 [details] [associations]
symbol:ESR1 "Estrogen receptor" species:9913 "Bos taurus"
[GO:0043433 "negative regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISS] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0043124 "negative regulation of
I-kappaB kinase/NF-kappaB cascade" evidence=ISS] [GO:0051000
"positive regulation of nitric-oxide synthase activity"
evidence=ISS] [GO:0045429 "positive regulation of nitric oxide
biosynthetic process" evidence=ISS] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0005794 "Golgi apparatus" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0030284 "estrogen receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001292
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105
Pfam:PF02159 PIRSF:PIRSF002527 PIRSF:PIRSF500101 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00543 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005886 GO:GO:0005634
GO:GO:0005794 GO:GO:0051091 GO:GO:0005496 GO:GO:0046872
GO:GO:0051000 GO:GO:0043565 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GO:GO:0043124 GO:GO:0043433 GO:GO:0045429 HOVERGEN:HBG108344
EMBL:AY538775 EMBL:X66841 EMBL:U64962 IPI:IPI00704572 PIR:S26595
RefSeq:NP_001001443.1 UniGene:Bt.32558 ProteinModelPortal:P49884
SMR:P49884 STRING:P49884 GlycoSuiteDB:P49884 PRIDE:P49884
GeneID:407238 KEGG:bta:407238 CTD:2099 eggNOG:NOG320746
HOGENOM:HOG000233468 InParanoid:P49884 KO:K08550 OrthoDB:EOG4JM7PP
BindingDB:P49884 ChEMBL:CHEMBL2930 NextBio:20818487 GO:GO:0030284
InterPro:IPR024736 Pfam:PF12743 Uniprot:P49884
Length = 596
Score = 108 (43.1 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 197 HYGVWSCEGCKAFFKRSI--QGHNDYM--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 251
Query: 65 NK 66
K
Sbjct: 252 MK 253
Score = 97 (39.2 bits), Expect = 0.00054, P = 0.00054
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 227 QCTIDKNRRKSCQACRLRKCYEVGMMKGG 255
Score = 33 (16.7 bits), Expect = 2.3e-06, Sum P(2) = 2.3e-06
Identities = 8/22 (36%), Positives = 11/22 (50%)
Query: 70 QHLKNS---LLYEFACTNLVEL 88
+H+ N LY C N+V L
Sbjct: 516 RHMSNKGMEHLYSMKCKNVVPL 537
>WB|WBGene00017510 [details] [associations]
symbol:nhr-178 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0019915 "lipid storage" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GO:GO:0019915 EMBL:FO081161 GeneTree:ENSGT00530000064622
HOGENOM:HOG000018997 HSSP:P06536 PIR:T32670 RefSeq:NP_503454.2
UniGene:Cel.4058 ProteinModelPortal:O44635 SMR:O44635
DIP:DIP-26364N MINT:MINT-1128951 EnsemblMetazoa:F16B4.9
GeneID:184560 KEGG:cel:CELE_F16B4.9 UCSC:F16B4.9 CTD:184560
WormBase:F16B4.9 eggNOG:NOG310520 InParanoid:O44635 OMA:RRSNYAG
NextBio:925178 Uniprot:O44635
Length = 421
Score = 117 (46.2 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 24/66 (36%), Positives = 34/66 (51%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+T C A R IV R + C+ G +CIV+ R QC+ CR KC+ +GM
Sbjct: 35 HFGVTSCRACAAFFRRTIV--MSRTKKYRCRGGMNKCIVNTNDRYQCRLCRFNKCVTLGM 92
Query: 65 NKDDAQ 70
++ Q
Sbjct: 93 TSENVQ 98
>MGI|MGI:1352465 [details] [associations]
symbol:Nr2c1 "nuclear receptor subfamily 2, group C, member
1" species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016605 "PML body" evidence=IDA]
[GO:0042803 "protein homodimerization activity" evidence=IPI]
[GO:0042826 "histone deacetylase binding" evidence=IPI] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0048386 "positive regulation of retinoic acid receptor
signaling pathway" evidence=IDA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:1352465 GO:GO:0046872 GO:GO:0003677
GO:GO:0016605 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0000122 GO:GO:0048386 eggNOG:NOG297520
GeneTree:ENSGT00700000104390 HOVERGEN:HBG008596 KO:K08543 CTD:7181
OrthoDB:EOG476JZT OMA:QNSNEMS EMBL:U28280 EMBL:U28269 EMBL:U28270
EMBL:U28271 EMBL:U28272 EMBL:U28273 EMBL:U28274 EMBL:U28275
EMBL:U28276 EMBL:U28277 EMBL:U28278 EMBL:U28279 EMBL:U28265
EMBL:Y11436 EMBL:U30482 EMBL:L26957 EMBL:AK146891 EMBL:AK149374
EMBL:AC127596 EMBL:AC138026 EMBL:BC090662 EMBL:BC094580
IPI:IPI00314621 IPI:IPI00656276 RefSeq:NP_035759.3
UniGene:Mm.107483 ProteinModelPortal:Q505F1 SMR:Q505F1
DIP:DIP-29275N STRING:Q505F1 PhosphoSite:Q505F1 PaxDb:Q505F1
PRIDE:Q505F1 Ensembl:ENSMUST00000092213 Ensembl:ENSMUST00000099343
Ensembl:ENSMUST00000105290 GeneID:22025 KEGG:mmu:22025
InParanoid:Q0VGP8 NextBio:301764 Bgee:Q505F1 CleanEx:MM_NR2C1
Genevestigator:Q505F1 GermOnline:ENSMUSG00000005897 Uniprot:Q505F1
Length = 590
Score = 119 (46.9 bits), Expect = 2.3e-06, P = 2.3e-06
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R I +N +C+ G+ C+++K HRN+CQ CRL++C+ G
Sbjct: 111 RHYGAITCEGCKGFFKRSI----RKNLVYSCR-GSKDCVINKHHRNRCQYCRLQRCIAFG 165
Query: 64 MNKDDAQ 70
M +D Q
Sbjct: 166 MKQDSVQ 172
Score = 106 (42.4 bits), Expect = 5.8e-05, P = 5.8e-05
Identities = 26/78 (33%), Positives = 43/78 (55%)
Query: 41 CIV--DKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRN 98
C+V DKA A + C G K + ++ +L+Y +C + C+++K HRN
Sbjct: 101 CVVCGDKASGRHYGAITCEGC--KGFFK---RSIRKNLVY--SCRGSKD--CVINKHHRN 151
Query: 99 QCQACRLKKCLNMGMNKD 116
+CQ CRL++C+ GM +D
Sbjct: 152 RCQYCRLQRCIAFGMKQD 169
>RGD|3535 [details] [associations]
symbol:Rarb "retinoic acid receptor, beta" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0001657 "ureteric bud
development" evidence=ISO] [GO:0003417 "growth plate cartilage
development" evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0003708 "retinoic
acid receptor activity" evidence=NAS;IDA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0008144 "drug binding" evidence=IDA] [GO:0008285 "negative
regulation of cell proliferation" evidence=ISO] [GO:0021756 "striatum
development" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0031641 "regulation of myelination" evidence=IDA] [GO:0032331
"negative regulation of chondrocyte differentiation" evidence=ISO]
[GO:0032403 "protein complex binding" evidence=IPI] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=ISO] [GO:0035264
"multicellular organism growth" evidence=ISO] [GO:0043065 "positive
regulation of apoptotic process" evidence=ISO] [GO:0043068 "positive
regulation of programmed cell death" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0045666 "positive
regulation of neuron differentiation" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0046965 "retinoid X receptor binding"
evidence=IPI] [GO:0048048 "embryonic eye morphogenesis" evidence=ISO]
[GO:0048384 "retinoic acid receptor signaling pathway" evidence=IDA]
[GO:0048566 "embryonic digestive tract development" evidence=ISO]
[GO:0055012 "ventricular cardiac muscle cell differentiation"
evidence=ISO] [GO:0061037 "negative regulation of cartilage
development" evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 RGD:3535 GO:GO:0005634 GO:GO:0046872 GO:GO:0008144
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045666 GO:GO:0031641
HOVERGEN:HBG005606 GO:GO:0003708 eggNOG:NOG297448 HSSP:P10826
EMBL:AJ002942 IPI:IPI00763374 UniGene:Rn.232243
ProteinModelPortal:O54746 STRING:O54746 Genevestigator:O54746
Uniprot:O54746
Length = 291
Score = 114 (45.2 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 33/114 (28%), Positives = 54/114 (47%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C C+++K RN+CQ CRL+KC +GM
Sbjct: 92 HYGVSACEGCKGFFRRSI----QKNMIYTCHRDKN-CVINKVTRNRCQYCRLQKCFEVGM 146
Query: 65 NKDDAQHLKNSLLYEFA---CTNLVELRCIVD-------KAHRNQCQA-CRLKK 107
+K+ ++ +N E + CT E+ +D KAH+ + C+L K
Sbjct: 147 SKESVRNDRNKKKKEPSKQECTESYEMTAELDDLTEKIRKAHQETFPSLCQLGK 200
Score = 96 (38.9 bits), Expect = 0.00024, P = 0.00024
Identities = 14/27 (51%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C+++K RN+CQ CRL+KC +GM+K+
Sbjct: 123 CVINKVTRNRCQYCRLQKCFEVGMSKE 149
>ZFIN|ZDB-GENE-080403-8 [details] [associations]
symbol:nr2c2 "nuclear receptor subfamily 2, group C,
member 2" species:7955 "Danio rerio" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-080403-8 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 eggNOG:NOG297520 GeneTree:ENSGT00700000104390
HOVERGEN:HBG008596 HOGENOM:HOG000013058 CTD:7182 KO:K08544
OMA:KADVQRP OrthoDB:EOG4Z36D8 EMBL:FP017199 IPI:IPI00511238
RefSeq:NP_001116766.1 UniGene:Dr.160181 SMR:B0UXU0
Ensembl:ENSDART00000011597 Ensembl:ENSDART00000125232 GeneID:569321
KEGG:dre:569321 NextBio:20889621 Uniprot:B0UXU0
Length = 623
Score = 119 (46.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 26/67 (38%), Positives = 37/67 (55%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R V K+ C++ Q C+++K HRN+CQ CRL+KCL MG
Sbjct: 157 RHYGAVSCEGCKGFFKRS-VRKSLTYSCRSNQD----CVINKHHRNRCQFCRLRKCLEMG 211
Query: 64 MNKDDAQ 70
M + Q
Sbjct: 212 MKMESVQ 218
Score = 113 (44.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 29/78 (37%), Positives = 43/78 (55%)
Query: 41 CIV--DKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRN 98
C+V DKA A + C G K + ++ SL Y +C + + C+++K HRN
Sbjct: 147 CVVCGDKASGRHYGAVSCEGC--KGFFK---RSVRKSLTY--SCRSNQD--CVINKHHRN 197
Query: 99 QCQACRLKKCLNMGMNKD 116
+CQ CRL+KCL MGM +
Sbjct: 198 RCQFCRLRKCLEMGMKME 215
>MGI|MGI:1352457 [details] [associations]
symbol:Nr4a3 "nuclear receptor subfamily 4, group A, member
3" species:10090 "Mus musculus" [GO:0001077 "RNA polymerase II core
promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IDA] [GO:0001707 "mesoderm formation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0007411 "axon guidance" evidence=IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IMP] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IMP] [GO:0033554 "cellular response to stress"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IMP] [GO:0043565 "sequence-specific DNA
binding" evidence=IDA] [GO:0045787 "positive regulation of cell
cycle" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0048752
"semicircular canal morphogenesis" evidence=IMP] [GO:0050885
"neuromuscular process controlling balance" evidence=IMP]
[GO:0060005 "vestibular reflex" evidence=IMP] [GO:2000108 "positive
regulation of leukocyte apoptotic process" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003070 InterPro:IPR003072 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01286 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1352457
GO:GO:0007411 GO:GO:0021766 GO:GO:0033554 GO:GO:0046872
GO:GO:0031100 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0043434 GO:GO:0050885 GO:GO:0043524 GO:GO:0005667
GO:GO:0001077 GO:GO:0001707 GO:GO:0030534 GO:GO:0030522
GO:GO:0045787 GO:GO:0048752 eggNOG:NOG245120
GeneTree:ENSGT00640000091364 HOGENOM:HOG000230925
HOVERGEN:HBG052663 CTD:8013 KO:K08559 OrthoDB:EOG4894MB
GO:GO:2000108 GO:GO:0060005 EMBL:AF191211 EMBL:AF191212
IPI:IPI00137203 IPI:IPI00410918 RefSeq:NP_056558.1
UniGene:Mm.247261 UniGene:Mm.487935 ProteinModelPortal:Q9QZB6
SMR:Q9QZB6 STRING:Q9QZB6 PhosphoSite:Q9QZB6 PRIDE:Q9QZB6
DNASU:18124 Ensembl:ENSMUST00000030025 GeneID:18124 KEGG:mmu:18124
UCSC:uc008suv.1 InParanoid:Q9QZB6 NextBio:293340 Bgee:Q9QZB6
CleanEx:MM_NR4A3 Genevestigator:Q9QZB6
GermOnline:ENSMUSG00000028341 Uniprot:Q9QZB6
Length = 627
Score = 119 (46.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 40/121 (33%), Positives = 57/121 (47%)
Query: 1 MTFRHDGMTDHPTCQA--GTERCIVDKAHRNQCQACQAGTGRCIV--DKAHRNQCQACRL 56
+TF G+T PT + G + +R+ +G G C V D A CQ +
Sbjct: 255 LTFPPLGLTASPTASSLLGESPSLPSPPNRSS----SSGEGTCAVCGDNA---ACQHYGV 307
Query: 57 KKCLNM-GMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNK 115
+ C G K Q KN+ ++ C L C VDK RN+CQ CR +KCL++GM K
Sbjct: 308 RTCEGCKGFFKRTVQ--KNA---KYVC--LANKNCPVDKRRRNRCQYCRFQKCLSVGMVK 360
Query: 116 D 116
+
Sbjct: 361 E 361
>RGD|61882 [details] [associations]
symbol:Nr4a3 "nuclear receptor subfamily 4, group A, member 3"
species:10116 "Rattus norvegicus" [GO:0001077 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA;ISO] [GO:0001707 "mesoderm formation"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005667
"transcription factor complex" evidence=IEA;ISO] [GO:0007411 "axon
guidance" evidence=IEA;ISO] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA;ISO] [GO:0030534 "adult behavior" evidence=IEA;ISO]
[GO:0031100 "organ regeneration" evidence=IEP] [GO:0033554 "cellular
response to stress" evidence=IEA;ISO] [GO:0042472 "inner ear
morphogenesis" evidence=ISO] [GO:0043066 "negative regulation of
apoptotic process" evidence=ISO] [GO:0043434 "response to peptide
hormone stimulus" evidence=IEP] [GO:0043524 "negative regulation of
neuron apoptotic process" evidence=IEA;ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;ISO] [GO:0045787
"positive regulation of cell cycle" evidence=IEA;ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA;ISO] [GO:0050885 "neuromuscular process
controlling balance" evidence=IEA;ISO] [GO:0060005 "vestibular
reflex" evidence=IEA;ISO] [GO:2000108 "positive regulation of
leukocyte apoptotic process" evidence=IEA;ISO] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003072 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01286 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:61882 GO:GO:0007411 GO:GO:0021766
GO:GO:0033554 GO:GO:0046872 GO:GO:0003677 GO:GO:0031100
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0043434
GO:GO:0050885 GO:GO:0043524 GO:GO:0005667 GO:GO:0001077
GO:GO:0001707 GO:GO:0030534 GO:GO:0030522 GO:GO:0045787
GO:GO:0048752 eggNOG:NOG245120 GeneTree:ENSGT00640000091364
HOGENOM:HOG000230925 HOVERGEN:HBG052663 CTD:8013 KO:K08559
OMA:PSTSMYF OrthoDB:EOG4894MB GO:GO:2000108 GO:GO:0060005
EMBL:D38530 EMBL:X86003 EMBL:DQ268830 EMBL:L19343 IPI:IPI00199318
IPI:IPI00411258 PIR:JC2493 PIR:S66671 RefSeq:NP_113816.1
UniGene:Rn.62694 ProteinModelPortal:P51179 SMR:P51179 STRING:P51179
PhosphoSite:P51179 Ensembl:ENSRNOT00000008302 GeneID:58853
KEGG:rno:58853 UCSC:RGD:61882 InParanoid:P51179 NextBio:611439
ArrayExpress:P51179 Genevestigator:P51179
GermOnline:ENSRNOG00000005964 Uniprot:P51179
Length = 628
Score = 119 (46.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 40/121 (33%), Positives = 57/121 (47%)
Query: 1 MTFRHDGMTDHPTCQA--GTERCIVDKAHRNQCQACQAGTGRCIV--DKAHRNQCQACRL 56
+TF G+T PT + G + +R+ +G G C V D A CQ +
Sbjct: 256 LTFPPLGLTASPTASSLLGESPSLPSPPNRSS----SSGEGTCAVCGDNA---ACQHYGV 308
Query: 57 KKCLNM-GMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNK 115
+ C G K Q KN+ ++ C L C VDK RN+CQ CR +KCL++GM K
Sbjct: 309 RTCEGCKGFFKRTVQ--KNA---KYVC--LANKNCPVDKRRRNRCQYCRFQKCLSVGMVK 361
Query: 116 D 116
+
Sbjct: 362 E 362
>UNIPROTKB|P51179 [details] [associations]
symbol:Nr4a3 "Nuclear receptor subfamily 4 group A member
3" species:10116 "Rattus norvegicus" [GO:0001077 "RNA polymerase II
core promoter proximal region sequence-specific DNA binding
transcription factor activity involved in positive regulation of
transcription" evidence=IEA] [GO:0001707 "mesoderm formation"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005667 "transcription factor complex"
evidence=IEA] [GO:0007411 "axon guidance" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0021766 "hippocampus
development" evidence=IEA] [GO:0030534 "adult behavior"
evidence=IEA] [GO:0033554 "cellular response to stress"
evidence=IEA] [GO:0043524 "negative regulation of neuron apoptotic
process" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0048752 "semicircular canal morphogenesis"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0060005 "vestibular reflex"
evidence=IEA] [GO:2000108 "positive regulation of leukocyte
apoptotic process" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003072 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01286 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:61882 GO:GO:0007411 GO:GO:0021766
GO:GO:0033554 GO:GO:0046872 GO:GO:0003677 GO:GO:0031100
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0043434
GO:GO:0050885 GO:GO:0043524 GO:GO:0005667 GO:GO:0001077
GO:GO:0001707 GO:GO:0030534 GO:GO:0030522 GO:GO:0045787
GO:GO:0048752 eggNOG:NOG245120 GeneTree:ENSGT00640000091364
HOGENOM:HOG000230925 HOVERGEN:HBG052663 CTD:8013 KO:K08559
OMA:PSTSMYF OrthoDB:EOG4894MB GO:GO:2000108 GO:GO:0060005
EMBL:D38530 EMBL:X86003 EMBL:DQ268830 EMBL:L19343 IPI:IPI00199318
IPI:IPI00411258 PIR:JC2493 PIR:S66671 RefSeq:NP_113816.1
UniGene:Rn.62694 ProteinModelPortal:P51179 SMR:P51179 STRING:P51179
PhosphoSite:P51179 Ensembl:ENSRNOT00000008302 GeneID:58853
KEGG:rno:58853 UCSC:RGD:61882 InParanoid:P51179 NextBio:611439
ArrayExpress:P51179 Genevestigator:P51179
GermOnline:ENSRNOG00000005964 Uniprot:P51179
Length = 628
Score = 119 (46.9 bits), Expect = 2.5e-06, P = 2.5e-06
Identities = 40/121 (33%), Positives = 57/121 (47%)
Query: 1 MTFRHDGMTDHPTCQA--GTERCIVDKAHRNQCQACQAGTGRCIV--DKAHRNQCQACRL 56
+TF G+T PT + G + +R+ +G G C V D A CQ +
Sbjct: 256 LTFPPLGLTASPTASSLLGESPSLPSPPNRSS----SSGEGTCAVCGDNA---ACQHYGV 308
Query: 57 KKCLNM-GMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNK 115
+ C G K Q KN+ ++ C L C VDK RN+CQ CR +KCL++GM K
Sbjct: 309 RTCEGCKGFFKRTVQ--KNA---KYVC--LANKNCPVDKRRRNRCQYCRFQKCLSVGMVK 361
Query: 116 D 116
+
Sbjct: 362 E 362
>RGD|2582 [details] [associations]
symbol:Esr2 "estrogen receptor 2 (ER beta)" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO;IDA] [GO:0001046 "core
promoter sequence-specific DNA binding" evidence=ISO] [GO:0001541
"ovarian follicle development" evidence=ISO] [GO:0001662 "behavioral
fear response" evidence=IDA] [GO:0001764 "neuron migration"
evidence=ISO] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA;IDA] [GO:0005496 "steroid binding" evidence=IEA;IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IEA;ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0005739 "mitochondrion" evidence=ISO;IDA] [GO:0005886 "plasma
membrane" evidence=IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007420 "brain development" evidence=ISO]
[GO:0007611 "learning or memory" evidence=IMP] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0019899 "enzyme binding"
evidence=ISO] [GO:0030284 "estrogen receptor activity"
evidence=IMP;IDA] [GO:0030518 "intracellular steroid hormone receptor
signaling pathway" evidence=IDA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=ISO;TAS] [GO:0032355 "response
to estradiol stimulus" evidence=IDA] [GO:0033574 "response to
testosterone stimulus" evidence=IMP] [GO:0034056 "estrogen response
element binding" evidence=ISO;IDA] [GO:0042127 "regulation of cell
proliferation" evidence=ISO] [GO:0042562 "hormone binding"
evidence=IDA;IMP] [GO:0043005 "neuron projection" evidence=IDA]
[GO:0043065 "positive regulation of apoptotic process" evidence=ISO]
[GO:0043204 "perikaryon" evidence=IDA] [GO:0043523 "regulation of
neuron apoptotic process" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0045742
"positive regulation of epidermal growth factor receptor signaling
pathway" evidence=IMP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IDA] [GO:0048471 "perinuclear region of cytoplasm"
evidence=IDA] [GO:0048521 "negative regulation of behavior"
evidence=IDA] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=ISO;IDA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO;ISS] [GO:0060011 "Sertoli cell proliferation"
evidence=IMP] [GO:0060065 "uterus development" evidence=ISO]
[GO:0060068 "vagina development" evidence=ISO] [GO:0060548 "negative
regulation of cell death" evidence=IMP] [GO:0060740 "prostate gland
epithelium morphogenesis" evidence=ISO] [GO:0060743 "epithelial cell
maturation involved in prostate gland development" evidence=ISO]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0070374 "positive regulation of ERK1 and
ERK2 cascade" evidence=IDA] [GO:0071392 "cellular response to
estradiol stimulus" evidence=IDA] [GO:1901215 "negative regulation of
neuron death" evidence=IDA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:2582 GO:GO:0005739 GO:GO:0005886
GO:GO:0005634 GO:GO:0048471 GO:GO:0051091 GO:GO:0005496 GO:GO:0046872
GO:GO:0043204 GO:GO:0043565 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0070374 GO:GO:0045944
GO:GO:0043005 GO:GO:1901215 GO:GO:0042562 GO:GO:0003700 GO:GO:0006351
GO:GO:0000122 GO:GO:0007611 GO:GO:0033574 GO:GO:0045742 GO:GO:0043523
GO:GO:0001662 GO:GO:0050680 GO:GO:0071392 GO:GO:0030520 GO:GO:0060011
HOVERGEN:HBG108344 GO:GO:0030284 GO:GO:0034056 CTD:2100
eggNOG:NOG271979 KO:K08551 InterPro:IPR021064 Pfam:PF12497
EMBL:U57439 EMBL:AB012721 EMBL:AJ002602 EMBL:AJ002603 EMBL:AF042058
EMBL:AF042059 EMBL:AF042060 EMBL:AF042061 EMBL:AF161187
IPI:IPI00231793 IPI:IPI00231794 IPI:IPI00231795 IPI:IPI00231871
IPI:IPI00566569 PIR:JW0046 RefSeq:NP_036886.1 UniGene:Rn.37460
PDB:1HJ1 PDB:1QKN PDB:2J7X PDB:2J7Y PDBsum:1HJ1 PDBsum:1QKN
PDBsum:2J7X PDBsum:2J7Y ProteinModelPortal:Q62986 SMR:Q62986
STRING:Q62986 PhosphoSite:Q62986 PRIDE:Q62986 GeneID:25149
KEGG:rno:25149 UCSC:RGD:2582 InParanoid:Q62986 BindingDB:Q62986
ChEMBL:CHEMBL3021 EvolutionaryTrace:Q62986 NextBio:605585
ArrayExpress:Q62986 Genevestigator:Q62986
GermOnline:ENSRNOG00000005343 GO:GO:0048521 Uniprot:Q62986
Length = 530
Score = 118 (46.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 34/106 (32%), Positives = 54/106 (50%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 160 HYGVWSCEGCKAFFKRSI--QGHNDYI--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 214
Query: 65 NKDDAQHLKNSL-LYEFACTNLVELRCIVDKAHRNQCQACRLKKCL 109
K ++ + + ++ ++ C+ KA RN A R+K+ L
Sbjct: 215 VKCGSRRERCGYRIVRRQRSSSEQVHCL-SKAKRNGGHAPRVKELL 259
Score = 94 (38.1 bits), Expect = 0.00097, P = 0.00097
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 190 QCTIDKNRRKSCQACRLRKCYEVGMVKCG 218
>UNIPROTKB|Q62986 [details] [associations]
symbol:Esr2 "Estrogen receptor beta" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:2582 GO:GO:0005739 GO:GO:0005886
GO:GO:0005634 GO:GO:0048471 GO:GO:0051091 GO:GO:0005496
GO:GO:0046872 GO:GO:0043204 GO:GO:0043565 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0070374
GO:GO:0045944 GO:GO:0043005 GO:GO:1901215 GO:GO:0042562
GO:GO:0003700 GO:GO:0006351 GO:GO:0000122 GO:GO:0007611
GO:GO:0033574 GO:GO:0045742 GO:GO:0043523 GO:GO:0001662
GO:GO:0050680 GO:GO:0071392 GO:GO:0030520 GO:GO:0060011
HOVERGEN:HBG108344 GO:GO:0030284 GO:GO:0034056 CTD:2100
eggNOG:NOG271979 KO:K08551 InterPro:IPR021064 Pfam:PF12497
EMBL:U57439 EMBL:AB012721 EMBL:AJ002602 EMBL:AJ002603 EMBL:AF042058
EMBL:AF042059 EMBL:AF042060 EMBL:AF042061 EMBL:AF161187
IPI:IPI00231793 IPI:IPI00231794 IPI:IPI00231795 IPI:IPI00231871
IPI:IPI00566569 PIR:JW0046 RefSeq:NP_036886.1 UniGene:Rn.37460
PDB:1HJ1 PDB:1QKN PDB:2J7X PDB:2J7Y PDBsum:1HJ1 PDBsum:1QKN
PDBsum:2J7X PDBsum:2J7Y ProteinModelPortal:Q62986 SMR:Q62986
STRING:Q62986 PhosphoSite:Q62986 PRIDE:Q62986 GeneID:25149
KEGG:rno:25149 UCSC:RGD:2582 InParanoid:Q62986 BindingDB:Q62986
ChEMBL:CHEMBL3021 EvolutionaryTrace:Q62986 NextBio:605585
ArrayExpress:Q62986 Genevestigator:Q62986
GermOnline:ENSRNOG00000005343 GO:GO:0048521 Uniprot:Q62986
Length = 530
Score = 118 (46.6 bits), Expect = 2.6e-06, P = 2.6e-06
Identities = 34/106 (32%), Positives = 54/106 (50%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 160 HYGVWSCEGCKAFFKRSI--QGHNDYI--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 214
Query: 65 NKDDAQHLKNSL-LYEFACTNLVELRCIVDKAHRNQCQACRLKKCL 109
K ++ + + ++ ++ C+ KA RN A R+K+ L
Sbjct: 215 VKCGSRRERCGYRIVRRQRSSSEQVHCL-SKAKRNGGHAPRVKELL 259
Score = 94 (38.1 bits), Expect = 0.00097, P = 0.00097
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 190 QCTIDKNRRKSCQACRLRKCYEVGMVKCG 218
>WB|WBGene00020385 [details] [associations]
symbol:nhr-216 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00530000064622 EMBL:FO080498
RefSeq:NP_504427.3 ProteinModelPortal:Q23038 SMR:Q23038
EnsemblMetazoa:T09D3.4 GeneID:188325 KEGG:cel:CELE_T09D3.4
UCSC:T09D3.4 CTD:188325 WormBase:T09D3.4 eggNOG:NOG303659
HOGENOM:HOG000018958 InParanoid:Q23038 OMA:INAFTDG NextBio:938396
Uniprot:Q23038
Length = 436
Score = 103 (41.3 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 25/72 (34%), Positives = 37/72 (51%)
Query: 5 HDGMTDHPTCQAGTERCIV-DKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
H G+ C A R +V D + C + T +C VD RN C+ CR KKC+ +G
Sbjct: 60 HFGVQTCRPCAAFFRRIVVLDLKY-----TCVSNTQKCNVDGRGRNVCRDCRYKKCIAVG 114
Query: 64 MNKDDAQHLKNS 75
M D+ Q+ ++S
Sbjct: 115 MTTDNVQYNRDS 126
Score = 34 (17.0 bits), Expect = 2.6e-06, Sum P(2) = 2.6e-06
Identities = 8/23 (34%), Positives = 13/23 (56%)
Query: 97 RNQCQACRLKKCLNMGMNKDGKS 119
+NQ A ++K C + DGK+
Sbjct: 200 QNQQSANQIKFCDTINAFTDGKA 222
>UNIPROTKB|F1RS47 [details] [associations]
symbol:THRB "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0008050 "female
courtship behavior" evidence=IEA] [GO:0008016 "regulation of heart
contraction" evidence=IEA] [GO:0007621 "negative regulation of
female receptivity" evidence=IEA] [GO:0007605 "sensory perception
of sound" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0008016
GO:GO:0000122 GO:GO:0009887 GO:GO:0007605 GO:GO:0031490
GO:GO:0004887 GO:GO:0007621 GO:GO:0008050
GeneTree:ENSGT00680000099662 OMA:HLIQATW EMBL:CU463272
EMBL:CU633256 Ensembl:ENSSSCT00000012277 Uniprot:F1RS47
Length = 461
Score = 117 (46.2 bits), Expect = 2.7e-06, P = 2.7e-06
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 14 CQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD----DA 69
C+ R I H + AC+ G+C++DK RNQCQ CR KKC+ +GM D D+
Sbjct: 127 CKGFFRRTIQKNLHPSY--ACKY-EGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDS 183
Query: 70 QHL-KNSLLYE 79
+ L K L+ E
Sbjct: 184 KRLAKRKLIEE 194
Score = 112 (44.5 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 32/80 (40%), Positives = 43/80 (53%)
Query: 41 CIV--DKA--HRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAH 96
C+V DKA + +C C + C G + Q KN L +AC E +C++DK
Sbjct: 107 CVVCGDKATGYHYRCITC--EGC--KGFFRRTIQ--KN-LHPSYACK--YEGKCVIDKVT 157
Query: 97 RNQCQACRLKKCLNMGMNKD 116
RNQCQ CR KKC+ +GM D
Sbjct: 158 RNQCQECRFKKCIYVGMATD 177
>UNIPROTKB|D6RBI3 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
HOGENOM:HOG000010312 OrthoDB:EOG4F7NK7 HGNC:HGNC:9865 EMBL:AC093416
EMBL:AC092422 EMBL:AC098477 EMBL:AC133141 EMBL:AC133797
IPI:IPI00967715 ProteinModelPortal:D6RBI3 SMR:D6RBI3
Ensembl:ENST00000383772 ArrayExpress:D6RBI3 Bgee:D6RBI3
Uniprot:D6RBI3
Length = 402
Score = 116 (45.9 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 33/114 (28%), Positives = 54/114 (47%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C C+++K RN+CQ CRL+KC +GM
Sbjct: 99 HYGVSACEGCKGFFRRSI----QKNMIYTCHRDKN-CVINKVTRNRCQYCRLQKCFEVGM 153
Query: 65 NKDDAQHLKNSLLYEFA---CTNLVELRCIVD-------KAHRNQCQA-CRLKK 107
+K+ ++ +N E + CT E+ +D KAH+ + C+L K
Sbjct: 154 SKESVRNDRNKKKKETSKQECTESYEMTAELDDLTEKIRKAHQETFPSLCQLGK 207
Score = 96 (38.9 bits), Expect = 0.00040, P = 0.00040
Identities = 14/27 (51%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C+++K RN+CQ CRL+KC +GM+K+
Sbjct: 130 CVINKVTRNRCQYCRLQKCFEVGMSKE 156
>UNIPROTKB|Q59IV8 [details] [associations]
symbol:Esr2 "Estrogen receptor 2 beta, isoform CRA_a"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001046 "core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0001541 "ovarian follicle development"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005739 "mitochondrion"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=IEA] [GO:0034056 "estrogen response
element binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0050680 "negative regulation
of epithelial cell proliferation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060065 "uterus development"
evidence=IEA] [GO:0060068 "vagina development" evidence=IEA]
[GO:0060740 "prostate gland epithelium morphogenesis" evidence=IEA]
[GO:0060743 "epithelial cell maturation involved in prostate gland
development" evidence=IEA] [GO:0060766 "negative regulation of
androgen receptor signaling pathway" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:2582 GO:GO:0005739 GO:GO:0005634 GO:GO:0001764
GO:GO:0007420 GO:GO:0051091 GO:GO:0005496 GO:GO:0046872
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0000122
GO:GO:0043065 GO:GO:0001541 GO:GO:0050680 GO:GO:0060740
GeneTree:ENSGT00700000104072 GO:GO:0030520 GO:GO:0060068
GO:GO:0001046 EMBL:CH473947 GO:GO:0060766 HOVERGEN:HBG108344
HOGENOM:HOG000233468 GO:GO:0034056 GO:GO:0060065 OrthoDB:EOG41RPTT
GO:GO:0060743 InterPro:IPR021064 Pfam:PF12497 IPI:IPI00566569
UniGene:Rn.37460 EMBL:AB190770 SMR:Q59IV8 STRING:Q59IV8
Ensembl:ENSRNOT00000043602 Genevestigator:Q59IV8 Uniprot:Q59IV8
Length = 567
Score = 118 (46.6 bits), Expect = 2.8e-06, P = 2.8e-06
Identities = 34/106 (32%), Positives = 54/106 (50%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 179 HYGVWSCEGCKAFFKRSI--QGHNDYI--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 233
Query: 65 NKDDAQHLKNSL-LYEFACTNLVELRCIVDKAHRNQCQACRLKKCL 109
K ++ + + ++ ++ C+ KA RN A R+K+ L
Sbjct: 234 VKCGSRRERCGYRIVRRQRSSSEQVHCL-SKAKRNGGHAPRVKELL 278
>WB|WBGene00003674 [details] [associations]
symbol:nhr-84 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:Z81116 HSSP:P03372 GeneTree:ENSGT00530000064622
HOGENOM:HOG000018997 PIR:T24564 RefSeq:NP_506968.1
ProteinModelPortal:O45756 SMR:O45756 IntAct:O45756
EnsemblMetazoa:T06C12.7 GeneID:191731 KEGG:cel:CELE_T06C12.7
UCSC:T06C12.7 CTD:191731 WormBase:T06C12.7 eggNOG:NOG303380
InParanoid:O45756 OMA:WNYRSER NextBio:950130 Uniprot:O45756
Length = 416
Score = 116 (45.9 bits), Expect = 2.9e-06, P = 2.9e-06
Identities = 26/71 (36%), Positives = 36/71 (50%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C A R V H+ + + Q G+C V R QC+ACRLKKC +GM
Sbjct: 39 HFGVLSCRACAAFFRRSFV---HKKEYKCRQRNVGKCDVSGNDRYQCRACRLKKCKELGM 95
Query: 65 NKDDAQHLKNS 75
++ Q +NS
Sbjct: 96 TPENVQMDRNS 106
>UNIPROTKB|G3V6F0 [details] [associations]
symbol:Nr1i3 "Nuclear receptor subfamily 1 group I member
3" species:10116 "Rattus norvegicus" [GO:0003700 "sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
RGD:621400 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 EMBL:CH473985 UniGene:Rn.163229
Ensembl:ENSRNOT00000004482 Uniprot:G3V6F0
Length = 286
Score = 113 (44.8 bits), Expect = 3.1e-06, P = 3.1e-06
Identities = 20/29 (68%), Positives = 22/29 (75%)
Query: 39 GRCIVDKAHRNQCQACRLKKCLNMGMNKD 67
GRC V KA R C ACRL+KCLN+GM KD
Sbjct: 61 GRCEVSKAQRRHCPACRLQKCLNVGMRKD 89
Score = 107 (42.7 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 19/28 (67%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
RC V KA R C ACRL+KCLN+GM KD
Sbjct: 62 RCEVSKAQRRHCPACRLQKCLNVGMRKD 89
>UNIPROTKB|Q66J63 [details] [associations]
symbol:nr2c1-b "Nuclear receptor subfamily 2 group C member
1-B" species:8355 "Xenopus laevis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0000122 GO:GO:0030522 HSSP:P03372 HOVERGEN:HBG008596
KO:K08543 EMBL:BC081046 RefSeq:NP_001087654.1 UniGene:Xl.7293
ProteinModelPortal:Q66J63 SMR:Q66J63 GeneID:447478 KEGG:xla:447478
CTD:447478 Xenbase:XB-GENE-865413 Uniprot:Q66J63
Length = 637
Score = 118 (46.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R I +N C+ G+ C+++K +RN+CQ CRL++C+++G
Sbjct: 162 RHYGAVTCEGCKGFFKRSI----RKNLIYTCR-GSKDCVINKHYRNRCQYCRLQRCISLG 216
Query: 64 MNKDDAQ 70
M +D Q
Sbjct: 217 MKQDSVQ 223
Score = 105 (42.0 bits), Expect = 8.2e-05, P = 8.2e-05
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 41 CIV--DKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRN 98
C+V DKA A + C G K + ++ +L+Y C + C+++K +RN
Sbjct: 152 CVVCGDKASGRHYGAVTCEGC--KGFFK---RSIRKNLIY--TCRGSKD--CVINKHYRN 202
Query: 99 QCQACRLKKCLNMGMNKD 116
+CQ CRL++C+++GM +D
Sbjct: 203 RCQYCRLQRCISLGMKQD 220
>UNIPROTKB|Q6GN21 [details] [associations]
symbol:nr2c1-a "Nuclear receptor subfamily 2 group C member
1-A" species:8355 "Xenopus laevis" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0005634 "nucleus"
evidence=ISS] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=ISS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003068 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0003677 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0000122 GO:GO:0030522 HSSP:P03372 EMBL:BC073700 EMBL:AF013295
RefSeq:NP_001084198.1 UniGene:Xl.21534 ProteinModelPortal:Q6GN21
SMR:Q6GN21 GeneID:399361 KEGG:xla:399361 CTD:399361
Xenbase:XB-GENE-6254030 HOVERGEN:HBG008596 KO:K08543 Uniprot:Q6GN21
Length = 637
Score = 118 (46.6 bits), Expect = 3.3e-06, P = 3.3e-06
Identities = 23/67 (34%), Positives = 39/67 (58%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R I +N C+ G+ C+++K +RN+CQ CRL++C+++G
Sbjct: 162 RHYGAVTCEGCKGFFKRSI----RKNLVYTCR-GSKDCVINKHYRNRCQYCRLQRCMSLG 216
Query: 64 MNKDDAQ 70
M +D Q
Sbjct: 217 MKQDSVQ 223
Score = 104 (41.7 bits), Expect = 0.00010, P = 0.00010
Identities = 25/78 (32%), Positives = 44/78 (56%)
Query: 41 CIV--DKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRN 98
C+V DKA A + C G K + ++ +L+Y C + C+++K +RN
Sbjct: 152 CVVCGDKASGRHYGAVTCEGC--KGFFK---RSIRKNLVY--TCRGSKD--CVINKHYRN 202
Query: 99 QCQACRLKKCLNMGMNKD 116
+CQ CRL++C+++GM +D
Sbjct: 203 RCQYCRLQRCMSLGMKQD 220
>UNIPROTKB|P10826 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0003417 "growth plate cartilage
development" evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0021756 "striatum development"
evidence=IEA] [GO:0022008 "neurogenesis" evidence=IEA] [GO:0032331
"negative regulation of chondrocyte differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0055012
"ventricular cardiac muscle cell differentiation" evidence=IEA]
[GO:0061037 "negative regulation of cartilage development"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0048566
"embryonic digestive tract development" evidence=IMP] [GO:0005634
"nucleus" evidence=IDA] [GO:0003677 "DNA binding" evidence=TAS]
[GO:0007165 "signal transduction" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005737
GO:GO:0008285 GO:GO:0005654 GO:GO:0022008 GO:GO:0046872
GO:GO:0003677 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0000122 GO:GO:0043065
GO:GO:0048566 GO:GO:0035264 GO:GO:0035116
Pathway_Interaction_DB:retinoic_acid_pathway GO:GO:0048048
DrugBank:DB00459 GO:GO:0006367 GO:GO:0001657 GO:GO:0021756
GO:GO:0032331 GO:GO:0003417 HOVERGEN:HBG005606 GO:GO:0003708
GO:GO:0061037 GO:GO:0055012 PDB:4DM6 PDB:4DM8 PDBsum:4DM6
PDBsum:4DM8 DrugBank:DB00523 DrugBank:DB00926 eggNOG:NOG297448
HOGENOM:HOG000010312 OrthoDB:EOG4F7NK7 DrugBank:DB00210
DrugBank:DB04942 DrugBank:DB00799 CTD:5915 KO:K08528 EMBL:X07282
EMBL:Y00291 EMBL:AF157483 EMBL:BC060794 EMBL:X56849 EMBL:X77664
EMBL:X04014 EMBL:M57445 IPI:IPI00022989 IPI:IPI00219014
IPI:IPI00745428 PIR:S02827 PIR:S49021 RefSeq:NP_000956.2
RefSeq:NP_057236.1 UniGene:Hs.654490 UniGene:Hs.733004 PDB:1HRA
PDB:1XAP PDBsum:1HRA PDBsum:1XAP ProteinModelPortal:P10826
SMR:P10826 IntAct:P10826 MINT:MINT-1180428 STRING:P10826
DMDM:17380507 PRIDE:P10826 DNASU:5915 Ensembl:ENST00000330688
Ensembl:ENST00000404969 Ensembl:ENST00000437042
Ensembl:ENST00000458646 GeneID:5915 KEGG:hsa:5915 UCSC:uc003cdi.2
GeneCards:GC03P025194 HGNC:HGNC:9865 HPA:CAB002617 HPA:HPA004174
MIM:180220 neXtProt:NX_P10826 PharmGKB:PA34226 OMA:QEVFVCI
PhylomeDB:P10826 BindingDB:P10826 ChEMBL:CHEMBL2008
EvolutionaryTrace:P10826 GenomeRNAi:5915 NextBio:23024
ArrayExpress:P10826 Bgee:P10826 CleanEx:HS_RARB
Genevestigator:P10826 GermOnline:ENSG00000077092 Uniprot:P10826
Length = 455
Score = 116 (45.9 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 33/114 (28%), Positives = 54/114 (47%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C C+++K RN+CQ CRL+KC +GM
Sbjct: 99 HYGVSACEGCKGFFRRSI----QKNMIYTCHRDKN-CVINKVTRNRCQYCRLQKCFEVGM 153
Query: 65 NKDDAQHLKNSLLYEFA---CTNLVELRCIVD-------KAHRNQCQA-CRLKK 107
+K+ ++ +N E + CT E+ +D KAH+ + C+L K
Sbjct: 154 SKESVRNDRNKKKKETSKQECTESYEMTAELDDLTEKIRKAHQETFPSLCQLGK 207
Score = 96 (38.9 bits), Expect = 0.00048, P = 0.00048
Identities = 14/27 (51%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C+++K RN+CQ CRL+KC +GM+K+
Sbjct: 130 CVINKVTRNRCQYCRLQKCFEVGMSKE 156
>FB|FBgn0001323 [details] [associations]
symbol:knrl "knirps-like" species:7227 "Drosophila
melanogaster" [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISS;NAS] [GO:0005634 "nucleus" evidence=ISS;NAS]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=ISS] [GO:0007427 "epithelial cell migration,
open tracheal system" evidence=TAS] [GO:0035151 "regulation of tube
size, open tracheal system" evidence=TAS] [GO:0046845 "branched
duct epithelial cell fate determination, open tracheal system"
evidence=TAS] [GO:0007088 "regulation of mitosis" evidence=IMP]
[GO:0007424 "open tracheal system development" evidence=TAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 GO:GO:0005634 GO:GO:0007088 EMBL:AE014296
GO:GO:0046872 GO:GO:0035151 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
GO:GO:0007427 GeneTree:ENSGT00700000104361 GO:GO:0046845 KO:K08706
OrthoDB:EOG43R23N EMBL:X14153 EMBL:AY075383 PIR:S06450
RefSeq:NP_788552.1 UniGene:Dm.1017 ProteinModelPortal:P13054
SMR:P13054 DIP:DIP-20216N IntAct:P13054 MINT:MINT-763698
STRING:P13054 PRIDE:P13054 EnsemblMetazoa:FBtr0078212 GeneID:40285
KEGG:dme:Dmel_CG4761 CTD:40285 FlyBase:FBgn0001323 eggNOG:NOG315706
InParanoid:P13054 OMA:DCKNNGE PhylomeDB:P13054 GenomeRNAi:40285
NextBio:817980 Bgee:P13054 GermOnline:CG4761 Uniprot:P13054
Length = 647
Score = 118 (46.6 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 26/71 (36%), Positives = 41/71 (57%)
Query: 34 CQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVD 93
C+ G CI++K +R C+ACRLKKCL +GM+K +++ + S ++ C + + V
Sbjct: 51 CK-NNGECIINKKNRTACKACRLKKCLMVGMSKSGSRYGRRSNWFKIHCLLQEQQQQAVA 109
Query: 94 K--AHRNQCQA 102
AH N QA
Sbjct: 110 AMAAHHNSQQA 120
Score = 105 (42.0 bits), Expect = 8.3e-05, P = 8.3e-05
Identities = 20/36 (55%), Positives = 26/36 (72%)
Query: 82 CTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
C N E CI++K +R C+ACRLKKCL +GM+K G
Sbjct: 51 CKNNGE--CIINKKNRTACKACRLKKCLMVGMSKSG 84
>UNIPROTKB|I3LTD1 [details] [associations]
symbol:I3LTD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001628
InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00670000097927 EMBL:CU468031
EMBL:CU618320 EMBL:CU633370 Ensembl:ENSSSCT00000029437
Uniprot:I3LTD1
Length = 134
Score = 107 (42.7 bits), Expect = 3.4e-06, P = 3.4e-06
Identities = 25/82 (30%), Positives = 43/82 (52%)
Query: 44 DKAHRNQCQACRLKKC-LNMGMNKDDA--QHLKNSLLYE--FACTNLVELRCIVDKAHRN 98
D+A + C C + L+ G+ + K S+ + + C+ + C++ + RN
Sbjct: 53 DRAEQRTCLICGDRATGLHYGIISCEGCKGFFKRSICNKRVYRCSR--DKNCVMSRKQRN 110
Query: 99 QCQACRLKKCLNMGMNKDGKSM 120
+CQ CRL KCL MGMN+ G+ +
Sbjct: 111 RCQYCRLLKCLQMGMNRKGECL 132
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 22/62 (35%), Positives = 32/62 (51%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+ +R I +K + C C++ + RN+CQ CRL KCL MGM
Sbjct: 71 HYGIISCEGCKGFFKRSICNK----RVYRCSRDKN-CVMSRKQRNRCQYCRLLKCLQMGM 125
Query: 65 NK 66
N+
Sbjct: 126 NR 127
>WB|WBGene00003620 [details] [associations]
symbol:nhr-21 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00700000104802
EMBL:FO081192 UniGene:Cel.14682 GeneID:174202
KEGG:cel:CELE_F21D12.1 CTD:174202 RefSeq:NP_001040766.1
ProteinModelPortal:H2KZU4 SMR:H2KZU4 EnsemblMetazoa:F21D12.1e.1
EnsemblMetazoa:F21D12.1e.2 WormBase:F21D12.1e OMA:CGVAKEQ
Uniprot:H2KZU4
Length = 450
Score = 115 (45.5 bits), Expect = 4.2e-06, P = 4.2e-06
Identities = 32/99 (32%), Positives = 49/99 (49%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
+H G+T C+ R I +N+ AC+ G+C V K RN C++CRLK+C+ +G
Sbjct: 40 KHYGVTACNGCKGFFRRSI----WKNRTYACRY-QGKCGVAKEQRNACRSCRLKECIKVG 94
Query: 64 MNKDDAQHLKNSLLYEFACTNLVELRCI-VDKAHRNQCQ 101
MN Q ++ A NLV + K+ +CQ
Sbjct: 95 MNPRAVQGDIDTASTSSASPNLVSVEMHPYTKSEEVECQ 133
>UNIPROTKB|F1LQ07 [details] [associations]
symbol:Thrb "Thyroid hormone receptor beta" species:10116
"Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3858 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0004887
GeneTree:ENSGT00680000099662 IPI:IPI01016303
Ensembl:ENSRNOT00000008989 ArrayExpress:F1LQ07 Uniprot:F1LQ07
Length = 456
Score = 115 (45.5 bits), Expect = 4.3e-06, P = 4.3e-06
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 14 CQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD----DA 69
C+ R I H + +C+ G+CI+DK RNQCQ CR KKC+ +GM D D+
Sbjct: 122 CKGFFRRTIQKSLHPSY--SCKY-EGKCIIDKVTRNQCQECRFKKCIYVGMATDLVLDDS 178
Query: 70 QHL-KNSLLYE 79
+ L K L+ E
Sbjct: 179 KRLAKRKLIEE 189
Score = 111 (44.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/80 (37%), Positives = 44/80 (55%)
Query: 41 CIV--DKA--HRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAH 96
C+V DKA + +C C + C G + + ++ SL ++C E +CI+DK
Sbjct: 102 CVVCGDKATGYHYRCITC--EGC--KGFFR---RTIQKSLHPSYSCK--YEGKCIIDKVT 152
Query: 97 RNQCQACRLKKCLNMGMNKD 116
RNQCQ CR KKC+ +GM D
Sbjct: 153 RNQCQECRFKKCIYVGMATD 172
>MGI|MGI:98743 [details] [associations]
symbol:Thrb "thyroid hormone receptor beta" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IGI] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003690 "double-stranded DNA binding"
evidence=ISO] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=TAS] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004887 "thyroid
hormone receptor activity" evidence=ISO;TAS] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA;TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=IGI] [GO:0007605 "sensory
perception of sound" evidence=IMP] [GO:0007621 "negative regulation
of female receptivity" evidence=IMP] [GO:0008016 "regulation of
heart contraction" evidence=IMP] [GO:0008050 "female courtship
behavior" evidence=IMP] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=ISO] [GO:0009887 "organ morphogenesis"
evidence=IMP] [GO:0019216 "regulation of lipid metabolic process"
evidence=ISO] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0030522 "intracellular receptor mediated signaling pathway"
evidence=ISO;TAS] [GO:0031490 "chromatin DNA binding" evidence=IDA]
[GO:0032332 "positive regulation of chondrocyte differentiation"
evidence=ISO] [GO:0042803 "protein homodimerization activity"
evidence=ISO] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045778 "positive regulation of ossification"
evidence=ISO] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0090181
"regulation of cholesterol metabolic process" evidence=ISO]
[GO:0090207 "regulation of triglyceride metabolic process"
evidence=ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 MGI:MGI:98743 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0008016 GO:GO:0000122 GO:GO:0009887 GO:GO:0007605
GO:GO:0031490 GO:GO:0004887 HOVERGEN:HBG005606 GO:GO:0007621
GO:GO:0008050 GeneTree:ENSGT00680000099662 eggNOG:NOG272726
HOGENOM:HOG000010313 CTD:7068 KO:K08362 OrthoDB:EOG4Z8XWB
OMA:HLIQATW EMBL:S62756 EMBL:S62758 EMBL:U15548 EMBL:U15542
EMBL:U15543 EMBL:U15544 EMBL:U15545 EMBL:U15546 EMBL:U15547
EMBL:AK158826 EMBL:BC089035 EMBL:BC119552 EMBL:BC119553
IPI:IPI00125236 IPI:IPI00125243 PIR:A40377 PIR:A57035
RefSeq:NP_001106888.1 RefSeq:NP_033406.1 UniGene:Mm.32563
UniGene:Mm.489809 ProteinModelPortal:P37242 SMR:P37242
MINT:MINT-3374177 STRING:P37242 PhosphoSite:P37242 PRIDE:P37242
Ensembl:ENSMUST00000022303 Ensembl:ENSMUST00000022304
Ensembl:ENSMUST00000091471 GeneID:21834 KEGG:mmu:21834
UCSC:uc007shk.2 UCSC:uc007sho.2 NextBio:301286 Bgee:P37242
CleanEx:MM_THRB Genevestigator:P37242 GermOnline:ENSMUSG00000021779
Uniprot:P37242
Length = 461
Score = 115 (45.5 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 14 CQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD----DA 69
C+ R I H + +C+ G+CI+DK RNQCQ CR KKC+ +GM D D+
Sbjct: 127 CKGFFRRTIQKSLHPSY--SCKY-EGKCIIDKVTRNQCQECRFKKCIYVGMATDLVLDDS 183
Query: 70 QHL-KNSLLYE 79
+ L K L+ E
Sbjct: 184 KRLAKRKLIEE 194
Score = 111 (44.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/80 (37%), Positives = 44/80 (55%)
Query: 41 CIV--DKA--HRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAH 96
C+V DKA + +C C + C G + + ++ SL ++C E +CI+DK
Sbjct: 107 CVVCGDKATGYHYRCITC--EGC--KGFFR---RTIQKSLHPSYSCK--YEGKCIIDKVT 157
Query: 97 RNQCQACRLKKCLNMGMNKD 116
RNQCQ CR KKC+ +GM D
Sbjct: 158 RNQCQECRFKKCIYVGMATD 177
>RGD|3858 [details] [associations]
symbol:Thrb "thyroid hormone receptor beta" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0003690
"double-stranded DNA binding" evidence=IDA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=TAS] [GO:0004887 "thyroid
hormone receptor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=ISO;TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0007605 "sensory perception
of sound" evidence=ISO] [GO:0007621 "negative regulation of female
receptivity" evidence=ISO] [GO:0008016 "regulation of heart
contraction" evidence=ISO] [GO:0008050 "female courtship behavior"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation" evidence=IMP]
[GO:0009887 "organ morphogenesis" evidence=ISO] [GO:0019216
"regulation of lipid metabolic process" evidence=IDA] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0030522 "intracellular receptor
mediated signaling pathway" evidence=TAS] [GO:0031490 "chromatin DNA
binding" evidence=ISO] [GO:0032332 "positive regulation of
chondrocyte differentiation" evidence=IDA] [GO:0042803 "protein
homodimerization activity" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045778 "positive
regulation of ossification" evidence=IDA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0048568 "embryonic organ development"
evidence=IEP] [GO:0090181 "regulation of cholesterol metabolic
process" evidence=IMP] [GO:0090207 "regulation of triglyceride
metabolic process" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR001728
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:3858 GO:GO:0005634
GO:GO:0042803 GO:GO:0046872 GO:GO:0008284 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0090181 GO:GO:0003690 GO:GO:0032332 GO:GO:0045778 GO:GO:0048568
GO:GO:0004887 GO:GO:0090207 HOVERGEN:HBG005606 eggNOG:NOG272726
HOGENOM:HOG000010313 EMBL:J03933 EMBL:J03819 EMBL:M25071
IPI:IPI00210609 IPI:IPI00324058 PIR:A31820 PIR:A41355
UniGene:Rn.88692 PDB:3M9E PDBsum:3M9E ProteinModelPortal:P18113
SMR:P18113 STRING:P18113 PhosphoSite:P18113 UCSC:RGD:3858
InParanoid:P37826 BindingDB:P18113 ChEMBL:CHEMBL3917
EvolutionaryTrace:P18113 ArrayExpress:P18113 Genevestigator:P18113
GermOnline:ENSRNOG00000006649 Uniprot:P18113
Length = 461
Score = 115 (45.5 bits), Expect = 4.4e-06, P = 4.4e-06
Identities = 28/71 (39%), Positives = 39/71 (54%)
Query: 14 CQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD----DA 69
C+ R I H + +C+ G+CI+DK RNQCQ CR KKC+ +GM D D+
Sbjct: 127 CKGFFRRTIQKSLHPSY--SCKY-EGKCIIDKVTRNQCQECRFKKCIYVGMATDLVLDDS 183
Query: 70 QHL-KNSLLYE 79
+ L K L+ E
Sbjct: 184 KRLAKRKLIEE 194
Score = 111 (44.1 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 30/80 (37%), Positives = 44/80 (55%)
Query: 41 CIV--DKA--HRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAH 96
C+V DKA + +C C + C G + + ++ SL ++C E +CI+DK
Sbjct: 107 CVVCGDKATGYHYRCITC--EGC--KGFFR---RTIQKSLHPSYSCK--YEGKCIIDKVT 157
Query: 97 RNQCQACRLKKCLNMGMNKD 116
RNQCQ CR KKC+ +GM D
Sbjct: 158 RNQCQECRFKKCIYVGMATD 177
>WB|WBGene00003651 [details] [associations]
symbol:nhr-61 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0040010 "positive regulation of growth rate" evidence=IMP]
[GO:0009792 "embryo development ending in birth or egg hatching"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
InterPro:IPR002999 GO:GO:0005634 GO:GO:0009792 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0040018 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00700000104802 EMBL:Z83128 PIR:T26056 PIR:T26057
RefSeq:NP_001022381.1 RefSeq:NP_001022382.1
ProteinModelPortal:O62389 SMR:O62389 DIP:DIP-24810N IntAct:O62389
MINT:MINT-1120796 EnsemblMetazoa:W01D2.2a.1
EnsemblMetazoa:W01D2.2a.2 EnsemblMetazoa:W01D2.2a.3 GeneID:175142
KEGG:cel:CELE_W01D2.2 UCSC:W01D2.2a CTD:175142 WormBase:W01D2.2a
WormBase:W01D2.2b eggNOG:NOG311908 InParanoid:O62389 OMA:IMELVHL
NextBio:886944 ArrayExpress:O62389 Uniprot:O62389
Length = 412
Score = 114 (45.2 bits), Expect = 4.7e-06, P = 4.7e-06
Identities = 24/62 (38%), Positives = 37/62 (59%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
+H G+ C+ R I +N+ AC+ G G+C+V K RN C++CRL +CL++G
Sbjct: 40 KHYGVNACNGCKGFFRRSI----WKNRTYACRHG-GKCLVAKEQRNACRSCRLTRCLDVG 94
Query: 64 MN 65
MN
Sbjct: 95 MN 96
>MGI|MGI:1346307 [details] [associations]
symbol:Nr1i3 "nuclear receptor subfamily 1, group I, member
3" species:10090 "Mus musculus" [GO:0003677 "DNA binding"
evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004887 "thyroid
hormone receptor activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005829 "cytosol"
evidence=IDA] [GO:0005856 "cytoskeleton" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR001728
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:1346307
GO:GO:0005829 GO:GO:0005634 GO:GO:0045892 GO:GO:0005856
GO:GO:0046872 GO:GO:0003677 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
EMBL:CH466520 GO:GO:0004887 GeneTree:ENSGT00680000099585 PDB:1XLS
PDBsum:1XLS HOVERGEN:HBG108655 HOGENOM:HOG000220844 CTD:9970
eggNOG:NOG251788 KO:K08541 OMA:PRDRFLY OrthoDB:EOG4CVG7C
EMBL:AF009327 EMBL:AF009328 EMBL:AK133515 IPI:IPI00132688
IPI:IPI00678716 RefSeq:NP_001229991.1 RefSeq:NP_001229992.1
RefSeq:NP_033933.2 UniGene:Mm.486506 PDB:1XNX PDBsum:1XNX
ProteinModelPortal:O35627 SMR:O35627 STRING:O35627
PhosphoSite:O35627 PRIDE:O35627 Ensembl:ENSMUST00000005820
Ensembl:ENSMUST00000075469 GeneID:12355 KEGG:mmu:12355
InParanoid:Q3V008 BindingDB:O35627 ChEMBL:CHEMBL3069 ChiTaRS:NR1I3
EvolutionaryTrace:O35627 NextBio:281020 Bgee:O35627
CleanEx:MM_NR1I3 Genevestigator:O35627
GermOnline:ENSMUSG00000005677 Uniprot:O35627
Length = 358
Score = 113 (44.8 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 20/29 (68%), Positives = 22/29 (75%)
Query: 39 GRCIVDKAHRNQCQACRLKKCLNMGMNKD 67
GRC V KA R C ACRL+KCLN+GM KD
Sbjct: 61 GRCEVSKAQRRHCPACRLQKCLNVGMRKD 89
Score = 107 (42.7 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 19/28 (67%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
RC V KA R C ACRL+KCLN+GM KD
Sbjct: 62 RCEVSKAQRRHCPACRLQKCLNVGMRKD 89
>RGD|621400 [details] [associations]
symbol:Nr1i3 "nuclear receptor subfamily 1, group I, member 3"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO;ISS] [GO:0005737
"cytoplasm" evidence=ISO;ISS] [GO:0005829 "cytosol"
evidence=IEA;ISO] [GO:0005856 "cytoskeleton" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA;ISO] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:621400 GO:GO:0005829 GO:GO:0005634
GO:GO:0005737 GO:GO:0045892 GO:GO:0005856 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0004887
GeneTree:ENSGT00680000099585 HOVERGEN:HBG108655
HOGENOM:HOG000220844 CTD:9970 eggNOG:NOG251788 KO:K08541
OMA:PRDRFLY OrthoDB:EOG4CVG7C EMBL:AF133095 EMBL:AF133094
EMBL:AB104736 EMBL:AB105071 IPI:IPI00210846 RefSeq:NP_075230.1
UniGene:Rn.163229 ProteinModelPortal:Q9QUS1 SMR:Q9QUS1
STRING:Q9QUS1 PhosphoSite:Q9QUS1 PRIDE:Q9QUS1
Ensembl:ENSRNOT00000049873 GeneID:65035 KEGG:rno:65035
UCSC:RGD:621400 InParanoid:Q9QUS1 NextBio:613836
ArrayExpress:Q9QUS1 Genevestigator:Q9QUS1
GermOnline:ENSRNOG00000003260 Uniprot:Q9QUS1
Length = 358
Score = 113 (44.8 bits), Expect = 4.8e-06, P = 4.8e-06
Identities = 20/29 (68%), Positives = 22/29 (75%)
Query: 39 GRCIVDKAHRNQCQACRLKKCLNMGMNKD 67
GRC V KA R C ACRL+KCLN+GM KD
Sbjct: 61 GRCEVSKAQRRHCPACRLQKCLNVGMRKD 89
Score = 107 (42.7 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 19/28 (67%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
RC V KA R C ACRL+KCLN+GM KD
Sbjct: 62 RCEVSKAQRRHCPACRLQKCLNVGMRKD 89
>UNIPROTKB|Q9TU15 [details] [associations]
symbol:ESR2 "Estrogen receptor beta" species:9940 "Ovis
aries" [GO:0051091 "positive regulation of sequence-specific DNA
binding transcription factor activity" evidence=ISS]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0051091 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 HOVERGEN:HBG108344 CTD:2100 InterPro:IPR021064
Pfam:PF12497 EMBL:AF177936 EMBL:AF257109 RefSeq:NP_001009737.1
UniGene:Oar.651 ProteinModelPortal:Q9TU15 SMR:Q9TU15 GeneID:443066
Uniprot:Q9TU15
Length = 527
Score = 115 (45.5 bits), Expect = 5.3e-06, P = 5.3e-06
Identities = 35/106 (33%), Positives = 50/106 (47%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 157 HYGVWSCEGCKAFFKRSI--QGHNDYI--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 211
Query: 65 NKDDAQHLKNSLLYEFACTNLVE-LRCIVDKAHRNQCQACRLKKCL 109
K ++ + N E L C+ K RN R+K+ L
Sbjct: 212 VKCGSRRERCGYRIVRRQRNSDEQLHCL-SKTKRNGAPMTRVKELL 256
Score = 94 (38.1 bits), Expect = 0.00097, P = 0.00097
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 187 QCTIDKNRRKSCQACRLRKCYEVGMVKCG 215
>UNIPROTKB|O97727 [details] [associations]
symbol:NOR-1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR001628
InterPro:IPR003070 InterPro:IPR003072 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR01284
PRINTS:PR01286 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
GO:GO:0005634 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
GO:GO:0030522 GeneTree:ENSGT00640000091364 HOGENOM:HOG000230925
HOVERGEN:HBG052663 HSSP:P43354 EMBL:CU302447 EMBL:CU210903
UniGene:Ssc.761 EMBL:AJ011768 SMR:O97727 STRING:O97727
Ensembl:ENSSSCT00000005926 Uniprot:O97727
Length = 446
Score = 114 (45.2 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 39/121 (32%), Positives = 56/121 (46%)
Query: 1 MTFRHDGMTDHPTCQA--GTERCIVDKAHRNQCQACQAGTGRCIV--DKAHRNQCQACRL 56
+ F G+T PT + G + +R+ +G G C V D A CQ +
Sbjct: 271 LAFSPLGLTTSPTTSSLLGESPSLPSPPNRSTA----SGEGTCAVCGDNA---ACQHYGV 323
Query: 57 KKCLNM-GMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNK 115
+ C G K Q KN+ ++ C L C VDK RN+CQ CR +KCL++GM K
Sbjct: 324 RTCEGCKGFFKRTVQ--KNA---KYVC--LANKNCPVDKRRRNRCQYCRFQKCLSVGMVK 376
Query: 116 D 116
+
Sbjct: 377 E 377
>UNIPROTKB|E2R2A6 [details] [associations]
symbol:RARB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0061037 "negative regulation of cartilage
development" evidence=IEA] [GO:0055012 "ventricular cardiac muscle
cell differentiation" evidence=IEA] [GO:0048566 "embryonic
digestive tract development" evidence=IEA] [GO:0048048 "embryonic
eye morphogenesis" evidence=IEA] [GO:0045944 "positive regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0032331 "negative regulation of chondrocyte
differentiation" evidence=IEA] [GO:0022008 "neurogenesis"
evidence=IEA] [GO:0021756 "striatum development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003417
"growth plate cartilage development" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003708 "retinoic acid receptor activity" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0008285 GO:GO:0022008
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0000122 GO:GO:0043065 GO:GO:0048566 GO:GO:0035264
GO:GO:0035116 GO:GO:0048048 GO:GO:0001657 GO:GO:0021756
GO:GO:0032331 GO:GO:0003417 GO:GO:0003708 GO:GO:0061037
GO:GO:0055012 GeneTree:ENSGT00680000099662 CTD:5915 KO:K08528
OMA:QEVFVCI EMBL:AAEX03013556 RefSeq:XP_850755.1
Ensembl:ENSCAFT00000009235 GeneID:477045 KEGG:cfa:477045
NextBio:20852594 Uniprot:E2R2A6
Length = 448
Score = 114 (45.2 bits), Expect = 5.4e-06, P = 5.4e-06
Identities = 33/114 (28%), Positives = 54/114 (47%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C C+++K RN+CQ CRL+KC +GM
Sbjct: 92 HYGVSACEGCKGFFRRSI----QKNMIYTCHRDKN-CVINKVTRNRCQYCRLQKCFEVGM 146
Query: 65 NKDDAQHLKNSLLYEFA---CTNLVELRCIVD-------KAHRNQCQA-CRLKK 107
+K+ ++ +N E + CT E+ +D KAH+ + C+L K
Sbjct: 147 SKESVRNDRNKKKKEPSKQECTESYEMTAELDDLTEKIRKAHQETFPSLCQLGK 200
Score = 96 (38.9 bits), Expect = 0.00047, P = 0.00047
Identities = 14/27 (51%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C+++K RN+CQ CRL+KC +GM+K+
Sbjct: 123 CVINKVTRNRCQYCRLQKCFEVGMSKE 149
>WB|WBGene00003630 [details] [associations]
symbol:nhr-40 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IMP] [GO:0040017 "positive
regulation of locomotion" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0040007 GO:GO:0002119 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0040017 GO:GO:0040018 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00700000104738 EMBL:AF273782
EMBL:FO081470 RefSeq:NP_001024873.1 RefSeq:NP_001024874.1
RefSeq:NP_741729.1 UniGene:Cel.19469 ProteinModelPortal:Q22127
SMR:Q22127 PaxDb:Q22127 PRIDE:Q22127 EnsemblMetazoa:T03G6.2c
GeneID:180560 KEGG:cel:CELE_T03G6.2 UCSC:T03G6.2b CTD:180560
WormBase:T03G6.2a WormBase:T03G6.2b WormBase:T03G6.2c
eggNOG:NOG303462 HOGENOM:HOG000016596 InParanoid:Q22127 OMA:FECDIVI
NextBio:909880 Uniprot:Q22127
Length = 455
Score = 114 (45.2 bits), Expect = 5.5e-06, P = 5.5e-06
Identities = 25/65 (38%), Positives = 38/65 (58%)
Query: 14 CQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQHLK 73
C+ R +V+K Q CQ +G C+V K+ R C++CRLKKC +MGM+ QH +
Sbjct: 51 CKTFFRRALVNK----QTFTCQF-SGDCVVGKSVRCVCRSCRLKKCFDMGMDPKAIQHDR 105
Query: 74 NSLLY 78
+ + Y
Sbjct: 106 DKIRY 110
>ZFIN|ZDB-GENE-060929-100 [details] [associations]
symbol:hnf4g "hepatocyte nuclear factor 4, gamma"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-060929-100 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351
GeneTree:ENSGT00690000101777 EMBL:BX640462 IPI:IPI00919669
ProteinModelPortal:F1QM73 Ensembl:ENSDART00000144193
ArrayExpress:F1QM73 Bgee:F1QM73 Uniprot:F1QM73
Length = 458
Score = 114 (45.2 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 2 TFRHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLN 61
T +H G + C+ G R + K+H C+ + +C+VDK RNQC+ CRL KC
Sbjct: 70 TGKHYGASSCDGCK-GFFRRSIRKSHVYSCRFNR----QCVVDKDKRNQCRFCRLHKCFR 124
Query: 62 MGMNKDDAQHLKNSL 76
GM K+ Q+ ++ +
Sbjct: 125 AGMKKEAVQNERDRI 139
Score = 97 (39.2 bits), Expect = 0.00038, P = 0.00038
Identities = 16/28 (57%), Positives = 20/28 (71%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+C+VDK RNQC+ CRL KC GM K+
Sbjct: 103 QCVVDKDKRNQCRFCRLHKCFRAGMKKE 130
>UNIPROTKB|G3X7C1 [details] [associations]
symbol:THRB "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0031490 "chromatin DNA
binding" evidence=IEA] [GO:0019899 "enzyme binding" evidence=IEA]
[GO:0009887 "organ morphogenesis" evidence=IEA] [GO:0008050 "female
courtship behavior" evidence=IEA] [GO:0008016 "regulation of heart
contraction" evidence=IEA] [GO:0007621 "negative regulation of
female receptivity" evidence=IEA] [GO:0007605 "sensory perception
of sound" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0008016
GO:GO:0000122 GO:GO:0009887 GO:GO:0007605 GO:GO:0031490
GO:GO:0004887 GO:GO:0007621 GO:GO:0008050
GeneTree:ENSGT00680000099662 OMA:HLIQATW EMBL:DAAA02061150
EMBL:DAAA02061151 EMBL:DAAA02061152 Ensembl:ENSBTAT00000023670
Uniprot:G3X7C1
Length = 459
Score = 114 (45.2 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 14 CQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD----DA 69
C+ R I H + +C+ G+C++DK RNQCQ CR KKC+ +GM D D+
Sbjct: 125 CKGFFRRTIQKNLHPSY--SCKY-EGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDS 181
Query: 70 QHL-KNSLLYE 79
+ L K L+ E
Sbjct: 182 KRLAKRKLIEE 192
Score = 109 (43.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 31/80 (38%), Positives = 43/80 (53%)
Query: 41 CIV--DKA--HRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAH 96
C+V DKA + +C C + C G + Q KN L ++C E +C++DK
Sbjct: 105 CVVCGDKATGYHYRCITC--EGC--KGFFRRTIQ--KN-LHPSYSCK--YEGKCVIDKVT 155
Query: 97 RNQCQACRLKKCLNMGMNKD 116
RNQCQ CR KKC+ +GM D
Sbjct: 156 RNQCQECRFKKCIYVGMATD 175
>UNIPROTKB|P10828 [details] [associations]
symbol:THRB "Thyroid hormone receptor beta" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007621 "negative regulation of female
receptivity" evidence=IEA] [GO:0008016 "regulation of heart
contraction" evidence=IEA] [GO:0008050 "female courtship behavior"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0005515
"protein binding" evidence=IPI] [GO:0019899 "enzyme binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=TAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=NAS] [GO:0003714 "transcription corepressor activity"
evidence=TAS] [GO:0005634 "nucleus" evidence=TAS] [GO:0006351
"transcription, DNA-dependent" evidence=TAS] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0006367 "transcription initiation
from RNA polymerase II promoter" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR001728
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0003714
GO:GO:0005654 EMBL:CH471055 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0008016
Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0000122 GO:GO:0009887
GO:GO:0007605 DrugBank:DB00451 DrugBank:DB00279 GO:GO:0006367
GO:GO:0031490 GO:GO:0004887 HOVERGEN:HBG005606 GO:GO:0007621
GO:GO:0008050 PDB:2NLL PDBsum:2NLL Orphanet:97927 eggNOG:NOG272726
HOGENOM:HOG000010313 CTD:7068 KO:K08362 OrthoDB:EOG4Z8XWB
EMBL:M26747 EMBL:X04707 EMBL:AK096628 EMBL:AC012087 EMBL:AC093927
EMBL:AC098971 EMBL:AC099054 EMBL:AC112217 EMBL:BC106929
EMBL:BC106930 EMBL:AY286465 EMBL:AY286466 EMBL:AY286467
EMBL:AY286468 EMBL:AY286469 EMBL:AY286470 EMBL:AY286471 EMBL:X74497
IPI:IPI00444844 IPI:IPI00446999 PIR:A25237 PIR:S40152
RefSeq:NP_000452.2 RefSeq:NP_001121648.1 RefSeq:NP_001121649.1
RefSeq:NP_001239563.1 UniGene:Hs.187861 UniGene:Hs.713754 PDB:1BSX
PDB:1N46 PDB:1NAX PDB:1NQ0 PDB:1NQ1 PDB:1NQ2 PDB:1NUO PDB:1Q4X
PDB:1R6G PDB:1XZX PDB:1Y0X PDB:2J4A PDB:2PIN PDB:3D57 PDB:3GWS
PDB:3IMY PDB:3JZC PDBsum:1BSX PDBsum:1N46 PDBsum:1NAX PDBsum:1NQ0
PDBsum:1NQ1 PDBsum:1NQ2 PDBsum:1NUO PDBsum:1Q4X PDBsum:1R6G
PDBsum:1XZX PDBsum:1Y0X PDBsum:2J4A PDBsum:2PIN PDBsum:3D57
PDBsum:3GWS PDBsum:3IMY PDBsum:3JZC ProteinModelPortal:P10828
SMR:P10828 DIP:DIP-5991N IntAct:P10828 MINT:MINT-1508903
STRING:P10828 PhosphoSite:P10828 DMDM:586092 PRIDE:P10828
DNASU:7068 Ensembl:ENST00000280696 Ensembl:ENST00000356447
Ensembl:ENST00000396671 Ensembl:ENST00000415021
Ensembl:ENST00000416420 Ensembl:ENST00000447875 GeneID:7068
KEGG:hsa:7068 UCSC:uc003ccx.4 GeneCards:GC03M024158 HGNC:HGNC:11799
HPA:CAB002008 HPA:CAB002009 MIM:145650 MIM:188570 MIM:190160
MIM:274300 neXtProt:NX_P10828 Orphanet:3221 Orphanet:165994
PharmGKB:PA36508 OMA:HLIQATW BindingDB:P10828 ChEMBL:CHEMBL1947
EvolutionaryTrace:P10828 GenomeRNAi:7068 NextBio:27637
ArrayExpress:P10828 Bgee:P10828 CleanEx:HS_THRB
Genevestigator:P10828 GermOnline:ENSG00000151090 Uniprot:P10828
Length = 461
Score = 114 (45.2 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 14 CQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD----DA 69
C+ R I H + +C+ G+C++DK RNQCQ CR KKC+ +GM D D+
Sbjct: 127 CKGFFRRTIQKNLHPSY--SCKY-EGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDS 183
Query: 70 QHL-KNSLLYE 79
+ L K L+ E
Sbjct: 184 KRLAKRKLIEE 194
Score = 110 (43.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 37/116 (31%), Positives = 54/116 (46%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIV--DKA--HRNQCQACRLKKCL 60
HD + D A T + +K + + C+V DKA + +C C + C
Sbjct: 72 HDDVNDQSVSSAQTFQT-EEKKCKGYIPSYLDKDELCVVCGDKATGYHYRCITC--EGC- 127
Query: 61 NMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
G + Q KN L ++C E +C++DK RNQCQ CR KKC+ +GM D
Sbjct: 128 -KGFFRRTIQ--KN-LHPSYSCK--YEGKCVIDKVTRNQCQECRFKKCIYVGMATD 177
>UNIPROTKB|F1PPW9 [details] [associations]
symbol:THRB "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0004887 "thyroid hormone receptor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0004887
GeneTree:ENSGT00680000099662 CTD:7068 KO:K08362 OMA:HLIQATW
EMBL:AAEX03013558 RefSeq:XP_862690.2 Ensembl:ENSCAFT00000038637
GeneID:403599 KEGG:cfa:403599 Uniprot:F1PPW9
Length = 461
Score = 114 (45.2 bits), Expect = 5.6e-06, P = 5.6e-06
Identities = 27/71 (38%), Positives = 39/71 (54%)
Query: 14 CQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD----DA 69
C+ R I H + +C+ G+C++DK RNQCQ CR KKC+ +GM D D+
Sbjct: 127 CKGFFRRTIQKNLHPSY--SCKY-EGKCVIDKVTRNQCQECRFKKCIYVGMATDLVLDDS 183
Query: 70 QHL-KNSLLYE 79
+ L K L+ E
Sbjct: 184 KRLAKRKLIEE 194
Score = 109 (43.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 31/80 (38%), Positives = 43/80 (53%)
Query: 41 CIV--DKA--HRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAH 96
C+V DKA + +C C + C G + Q KN L ++C E +C++DK
Sbjct: 107 CVVCGDKATGYHYRCITC--EGC--KGFFRRTIQ--KN-LHPSYSCK--YEGKCVIDKVT 157
Query: 97 RNQCQACRLKKCLNMGMNKD 116
RNQCQ CR KKC+ +GM D
Sbjct: 158 RNQCQECRFKKCIYVGMATD 177
>MGI|MGI:97857 [details] [associations]
symbol:Rarb "retinoic acid receptor, beta" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0001657 "ureteric bud
development" evidence=IMP] [GO:0003417 "growth plate cartilage
development" evidence=IGI] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003708 "retinoic acid receptor
activity" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0008144 "drug binding"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IGI] [GO:0021756 "striatum development" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IMP] [GO:0031641 "regulation of
myelination" evidence=ISO] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=IMP] [GO:0032403 "protein
complex binding" evidence=ISO] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IGI] [GO:0035264 "multicellular organism
growth" evidence=IGI] [GO:0043065 "positive regulation of apoptotic
process" evidence=IGI] [GO:0043068 "positive regulation of
programmed cell death" evidence=IGI] [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IDA] [GO:0045666 "positive
regulation of neuron differentiation" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IGI;IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0046965 "retinoid X receptor binding"
evidence=ISO] [GO:0048048 "embryonic eye morphogenesis"
evidence=IGI] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=ISO] [GO:0048566 "embryonic digestive tract
development" evidence=ISO] [GO:0055012 "ventricular cardiac muscle
cell differentiation" evidence=IMP] [GO:0061037 "negative
regulation of cartilage development" evidence=IMP]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 MGI:MGI:97857 GO:GO:0005634 GO:GO:0008285
GO:GO:0022008 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0003700 GO:GO:0000122 GO:GO:0043065
GO:GO:0048566 GO:GO:0035264 GO:GO:0035116 GO:GO:0048048
GO:GO:0001657 GO:GO:0021756 GO:GO:0032331 GO:GO:0003417
HOVERGEN:HBG005606 GO:GO:0003708 GO:GO:0061037 PDB:1XDK PDBsum:1XDK
GO:GO:0055012 eggNOG:NOG297448 HOGENOM:HOG000010312
OrthoDB:EOG4F7NK7 CTD:5915 KO:K08528 OMA:QEVFVCI EMBL:X56574
EMBL:X56569 EMBL:X56573 EMBL:S56660 EMBL:S92180 IPI:IPI00130386
IPI:IPI00230346 IPI:IPI00230347 IPI:IPI00230348 PIR:S05051
RefSeq:NP_035373.1 UniGene:Mm.259318 ProteinModelPortal:P22605
SMR:P22605 IntAct:P22605 STRING:P22605 PRIDE:P22605
Ensembl:ENSMUST00000063750 GeneID:218772 KEGG:mmu:218772
UCSC:uc007xvc.1 InParanoid:P22605 BindingDB:P22605
ChEMBL:CHEMBL3266 EvolutionaryTrace:P22605 NextBio:376409
Bgee:P22605 CleanEx:MM_RARB Genevestigator:P22605
GermOnline:ENSMUSG00000017491 Uniprot:P22605
Length = 482
Score = 114 (45.2 bits), Expect = 6.0e-06, P = 6.0e-06
Identities = 33/114 (28%), Positives = 54/114 (47%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C C+++K RN+CQ CRL+KC +GM
Sbjct: 126 HYGVSACEGCKGFFRRSI----QKNMIYTCHRDKN-CVINKVTRNRCQYCRLQKCFEVGM 180
Query: 65 NKDDAQHLKNSLLYEFA---CTNLVELRCIVD-------KAHRNQCQA-CRLKK 107
+K+ ++ +N E + CT E+ +D KAH+ + C+L K
Sbjct: 181 SKESVRNDRNKKKKEPSKQECTESYEMTAELDDLTEKIRKAHQETFPSLCQLGK 234
Score = 96 (38.9 bits), Expect = 0.00052, P = 0.00052
Identities = 14/27 (51%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C+++K RN+CQ CRL+KC +GM+K+
Sbjct: 157 CVINKVTRNRCQYCRLQKCFEVGMSKE 183
>UNIPROTKB|B0ZBF8 [details] [associations]
symbol:NR3C2 "Mineralocorticoid receptor" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR001628
InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 Gene3D:3.30.50.10 GO:GO:0003700
GO:GO:0006351 EMBL:EU326312 EMBL:FJ515829 EMBL:AC069272
EMBL:AC093678 EMBL:AC093881 EMBL:AC104691 UniGene:Hs.163924
HGNC:HGNC:7979 HOGENOM:HOG000247011 HOVERGEN:HBG006336
EMBL:AC106889 IPI:IPI00889527 SMR:B0ZBF8 STRING:B0ZBF8
Ensembl:ENST00000342437 Uniprot:B0ZBF8
Length = 706
Score = 116 (45.9 bits), Expect = 6.2e-06, P = 6.2e-06
Identities = 28/80 (35%), Positives = 39/80 (48%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ +C+ +R V+ H C AG CI+DK R C ACRL+KCL GM
Sbjct: 614 HYGVVTCGSCKVFFKRA-VEGQHNYLC----AGRNDCIIDKIRRKNCPACRLQKCLQAGM 668
Query: 65 NKDDAQHLKNSLL-YEFACT 83
N + + + + Y CT
Sbjct: 669 NLGERRCISLPCMNYARGCT 688
Score = 96 (38.9 bits), Expect = 0.00085, P = 0.00085
Identities = 16/25 (64%), Positives = 18/25 (72%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMN 114
CI+DK R C ACRL+KCL GMN
Sbjct: 645 CIIDKIRRKNCPACRLQKCLQAGMN 669
>UNIPROTKB|F1NWF0 [details] [associations]
symbol:THRB "Thyroid hormone receptor beta" species:9031
"Gallus gallus" [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0004887 "thyroid hormone receptor activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR001728
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0004887
GeneTree:ENSGT00680000099662 EMBL:AADN02001118 EMBL:AADN02001120
EMBL:AADN02001121 EMBL:AADN02001122 EMBL:AADN02001123
EMBL:AADN02001124 EMBL:AADN02001119 IPI:IPI00587738
Ensembl:ENSGALT00000018423 ArrayExpress:F1NWF0 Uniprot:F1NWF0
Length = 363
Score = 112 (44.5 bits), Expect = 6.3e-06, P = 6.3e-06
Identities = 27/71 (38%), Positives = 38/71 (53%)
Query: 14 CQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD----DA 69
C+ R I H +C+ G+C++DK RNQCQ CR KKC+ +GM D D+
Sbjct: 61 CKGFFRRTIQKNLHPTY--SCKY-EGKCVIDKVTRNQCQECRFKKCIFVGMATDLVLDDS 117
Query: 70 QHL-KNSLLYE 79
+ L K L+ E
Sbjct: 118 KRLAKRKLIEE 128
Score = 107 (42.7 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 31/80 (38%), Positives = 43/80 (53%)
Query: 41 CIV--DKA--HRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAH 96
C+V DKA + +C C + C G + Q KN L ++C E +C++DK
Sbjct: 41 CVVCGDKATGYHYRCITC--EGC--KGFFRRTIQ--KN-LHPTYSCK--YEGKCVIDKVT 91
Query: 97 RNQCQACRLKKCLNMGMNKD 116
RNQCQ CR KKC+ +GM D
Sbjct: 92 RNQCQECRFKKCIFVGMATD 111
>RGD|1310102 [details] [associations]
symbol:Hnf4g "hepatocyte nuclear factor 4, gamma" species:10116
"Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003068
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00398 PRINTS:PR01282 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:1310102 GO:GO:0005634 GO:GO:0045893 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GeneTree:ENSGT00690000101777 IPI:IPI00869702
Ensembl:ENSRNOT00000011890 Uniprot:F1M342
Length = 364
Score = 112 (44.5 bits), Expect = 6.4e-06, P = 6.4e-06
Identities = 23/72 (31%), Positives = 39/72 (54%)
Query: 33 ACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYE---FACTNLVELR 89
+C + +C+VDK RNQC+ CRL+KC GM K+ Q+ ++ + + TN+ +
Sbjct: 2 SCYRFSRQCVVDKDKRNQCRYCRLRKCFRAGMKKEAVQNERDRISTRRSTYEGTNIPSIN 61
Query: 90 CIVDKAHRNQCQ 101
+ +A CQ
Sbjct: 62 TLA-QAEVRSCQ 72
Score = 100 (40.3 bits), Expect = 0.00013, P = 0.00013
Identities = 16/28 (57%), Positives = 21/28 (75%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+C+VDK RNQC+ CRL+KC GM K+
Sbjct: 9 QCVVDKDKRNQCRYCRLRKCFRAGMKKE 36
>UNIPROTKB|P68306 [details] [associations]
symbol:THRB "Thyroid hormone receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0004887 HOVERGEN:HBG005606
GeneTree:ENSGT00680000099662 eggNOG:NOG272726 HOGENOM:HOG000010313
CTD:7068 KO:K08362 EMBL:X17504 EMBL:M65207 EMBL:Z50188
IPI:IPI00657637 PIR:S09625 RefSeq:NP_990778.1 UniGene:Gga.609
ProteinModelPortal:P68306 SMR:P68306 IntAct:P68306 STRING:P68306
Ensembl:ENSGALT00000031162 GeneID:396431 KEGG:gga:396431
OrthoDB:EOG4Z8XWB NextBio:20816472 ArrayExpress:P68306
Uniprot:P68306
Length = 369
Score = 112 (44.5 bits), Expect = 6.5e-06, P = 6.5e-06
Identities = 27/71 (38%), Positives = 38/71 (53%)
Query: 14 CQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD----DA 69
C+ R I H +C+ G+C++DK RNQCQ CR KKC+ +GM D D+
Sbjct: 35 CKGFFRRTIQKNLHPTY--SCKY-EGKCVIDKVTRNQCQECRFKKCIFVGMATDLVLDDS 91
Query: 70 QHL-KNSLLYE 79
+ L K L+ E
Sbjct: 92 KRLAKRKLIEE 102
Score = 107 (42.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 31/80 (38%), Positives = 43/80 (53%)
Query: 41 CIV--DKA--HRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAH 96
C+V DKA + +C C + C G + Q KN L ++C E +C++DK
Sbjct: 15 CVVCGDKATGYHYRCITC--EGC--KGFFRRTIQ--KN-LHPTYSCK--YEGKCVIDKVT 65
Query: 97 RNQCQACRLKKCLNMGMNKD 116
RNQCQ CR KKC+ +GM D
Sbjct: 66 RNQCQECRFKKCIFVGMATD 85
>UNIPROTKB|P18117 [details] [associations]
symbol:thrb-a "Thyroid hormone receptor beta-A"
species:8355 "Xenopus laevis" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0004887 "thyroid hormone receptor activity" evidence=IC;TAS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0043565 "sequence-specific
DNA binding" evidence=IDA;IPI] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0070324 "thyroid
hormone binding" evidence=IDA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR001728
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0000122 GO:GO:0070324 GO:GO:0004887 HOVERGEN:HBG005606
EMBL:M35360 EMBL:M35359 PIR:C36067 RefSeq:NP_001090182.1
RefSeq:NP_001090533.1 UniGene:Xl.474 UniGene:Xl.60293
ProteinModelPortal:P18117 SMR:P18117 GeneID:779054 GeneID:780755
KEGG:xla:779054 KEGG:xla:780755 CTD:7068 CTD:779054
Xenbase:XB-GENE-6070716 KO:K08362 Uniprot:P18117
Length = 373
Score = 112 (44.5 bits), Expect = 6.6e-06, P = 6.6e-06
Identities = 22/54 (40%), Positives = 31/54 (57%)
Query: 14 CQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD 67
C+ R I H + +C+ G+C++DK RNQCQ CR KKC+ +GM D
Sbjct: 39 CKGFFRRTIQKNLHPSY--SCKY-EGKCVIDKVTRNQCQECRFKKCIAVGMATD 89
Score = 109 (43.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 31/80 (38%), Positives = 43/80 (53%)
Query: 41 CIV--DKA--HRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAH 96
C+V DKA + +C C + C G + Q KN L ++C E +C++DK
Sbjct: 19 CVVCGDKATGYHYRCITC--EGC--KGFFRRTIQ--KN-LHPSYSCK--YEGKCVIDKVT 69
Query: 97 RNQCQACRLKKCLNMGMNKD 116
RNQCQ CR KKC+ +GM D
Sbjct: 70 RNQCQECRFKKCIAVGMATD 89
>UNIPROTKB|F1SGE6 [details] [associations]
symbol:RARG "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070384 "Harderian gland development" evidence=IEA]
[GO:0061037 "negative regulation of cartilage development"
evidence=IEA] [GO:0060740 "prostate gland epithelium morphogenesis"
evidence=IEA] [GO:0060534 "trachea cartilage development"
evidence=IEA] [GO:0048048 "embryonic eye morphogenesis"
evidence=IEA] [GO:0046965 "retinoid X receptor binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0043065
"positive regulation of apoptotic process" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0032526 "response to retinoic acid" evidence=IEA] [GO:0032331
"negative regulation of chondrocyte differentiation" evidence=IEA]
[GO:0009952 "anterior/posterior pattern specification"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003430 "growth plate cartilage
chondrocyte growth" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0008285
GO:GO:0009952 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0005667 GO:GO:0000122 GO:GO:0043065
GO:GO:0032526 GO:GO:0035264 GO:GO:0035116 GO:GO:0048048
GO:GO:0060740 GO:GO:0032331 GO:GO:0003708 CTD:5916 GO:GO:0070384
GO:GO:0061037 GeneTree:ENSGT00680000099662 KO:K08529 GO:GO:0003430
GO:GO:0060534 EMBL:CU550678 RefSeq:XP_001924421.3 UniGene:Ssc.97565
Ensembl:ENSSSCT00000000277 GeneID:397221 KEGG:ssc:397221
OMA:TFNSMRS Uniprot:F1SGE6
Length = 447
Score = 113 (44.8 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 37/115 (32%), Positives = 55/115 (47%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C CI++K RN+CQ CRL+KC +GM
Sbjct: 90 HYGVSSCEGCKGFFRRSI----QKNMVYTCHRDKN-CIINKVTRNRCQYCRLQKCFEVGM 144
Query: 65 NKDDAQHLKN----------SL-LYEFACTNLVELRCIVDKAHRNQCQA-CRLKK 107
+K+ ++ +N SL YE + L EL V KAH+ + C+L K
Sbjct: 145 SKEAVRNDRNKKKKEVKEEGSLDSYELS-PQLEELITKVSKAHQETFPSLCQLGK 198
Score = 97 (39.2 bits), Expect = 0.00037, P = 0.00037
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI++K RN+CQ CRL+KC +GM+K+
Sbjct: 121 CIINKVTRNRCQYCRLQKCFEVGMSKE 147
>UNIPROTKB|Q28CK1 [details] [associations]
symbol:nr2c1 "Nuclear receptor subfamily 2 group C member
1" species:8364 "Xenopus (Silurana) tropicalis" [GO:0000122
"negative regulation of transcription from RNA polymerase II
promoter" evidence=ISS] [GO:0003677 "DNA binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISS]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003068 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01282 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0003677
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0000122
GO:GO:0030522 eggNOG:NOG297520 HOVERGEN:HBG008596 KO:K08543
CTD:7181 HOGENOM:HOG000013058 OrthoDB:EOG476JZT EMBL:CR926338
EMBL:BC123034 RefSeq:NP_001016207.1 UniGene:Str.15706 HSSP:P33242
ProteinModelPortal:Q28CK1 SMR:Q28CK1 STRING:Q28CK1 GeneID:548961
KEGG:xtr:548961 Xenbase:XB-GENE-484727 Bgee:Q28CK1 Uniprot:Q28CK1
Length = 636
Score = 115 (45.5 bits), Expect = 6.9e-06, P = 6.9e-06
Identities = 23/67 (34%), Positives = 38/67 (56%)
Query: 4 RHDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMG 63
RH G C+ +R I +N C+ G+ C+++K +RN+CQ CRL++C+ +G
Sbjct: 162 RHYGAVTCEGCKGFFKRSI----RKNLVYTCR-GSKDCVINKHYRNRCQYCRLQRCIALG 216
Query: 64 MNKDDAQ 70
M +D Q
Sbjct: 217 MKQDSVQ 223
Score = 101 (40.6 bits), Expect = 0.00022, P = 0.00022
Identities = 25/78 (32%), Positives = 43/78 (55%)
Query: 41 CIV--DKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRN 98
C+V DKA A + C G K + ++ +L+Y C + C+++K +RN
Sbjct: 152 CVVCGDKASGRHYGAVTCEGC--KGFFK---RSIRKNLVY--TCRGSKD--CVINKHYRN 202
Query: 99 QCQACRLKKCLNMGMNKD 116
+CQ CRL++C+ +GM +D
Sbjct: 203 RCQYCRLQRCIALGMKQD 220
>UNIPROTKB|E9PT44 [details] [associations]
symbol:Nr3c1 "Glucocorticoid receptor" species:10116
"Rattus norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0004883
"glucocorticoid receptor activity" evidence=IEA] [GO:0005496
"steroid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001409 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
Pfam:PF02155 PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00528
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
RGD:2741 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872 GO:GO:0043565
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00700000104072
GO:GO:0004883 IPI:IPI00563755 Ensembl:ENSRNOT00000044287
ArrayExpress:E9PT44 Uniprot:E9PT44
Length = 784
Score = 116 (45.9 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 25/72 (34%), Positives = 36/72 (50%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ +C+ +R + + H C AG CI+DK R C ACR +KCL GM
Sbjct: 439 HYGVLTCGSCKVFFKRAVEGRQHNYLC----AGRNDCIIDKIRRKNCPACRYRKCLQAGM 494
Query: 65 NKDDAQHLKNSL 76
N + A+ K +
Sbjct: 495 NLE-ARKTKKKI 505
>UNIPROTKB|Q08DD4 [details] [associations]
symbol:RARG "RARG protein" species:9913 "Bos taurus"
[GO:0070384 "Harderian gland development" evidence=IEA] [GO:0061037
"negative regulation of cartilage development" evidence=IEA]
[GO:0060740 "prostate gland epithelium morphogenesis" evidence=IEA]
[GO:0060534 "trachea cartilage development" evidence=IEA]
[GO:0048048 "embryonic eye morphogenesis" evidence=IEA] [GO:0046965
"retinoid X receptor binding" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0032526 "response to retinoic acid" evidence=IEA]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=IEA] [GO:0009952 "anterior/posterior pattern
specification" evidence=IEA] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0003430 "growth plate cartilage
chondrocyte growth" evidence=IEA] [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0008285
GO:GO:0009952 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0045944 GO:GO:0005667 GO:GO:0000122 GO:GO:0043065
GO:GO:0032526 GO:GO:0035264 GO:GO:0035116 GO:GO:0048048
GO:GO:0060740 GO:GO:0032331 HOVERGEN:HBG005606 GO:GO:0003708
CTD:5916 GO:GO:0070384 GO:GO:0061037 eggNOG:NOG297448
GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312 OrthoDB:EOG4F7NK7
KO:K08529 OMA:RSPQPDQ GO:GO:0003430 GO:GO:0060534 EMBL:DAAA02012865
EMBL:BC123809 IPI:IPI00707092 RefSeq:NP_001124228.1
UniGene:Bt.53782 SMR:Q08DD4 STRING:Q08DD4
Ensembl:ENSBTAT00000009984 GeneID:540425 KEGG:bta:540425
InParanoid:Q08DD4 NextBio:20878630 Uniprot:Q08DD4
Length = 458
Score = 113 (44.8 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 37/115 (32%), Positives = 55/115 (47%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C CI++K RN+CQ CRL+KC +GM
Sbjct: 101 HYGVSSCEGCKGFFRRSI----QKNMVYTCHRDKN-CIINKVTRNRCQYCRLQKCFEVGM 155
Query: 65 NKDDAQHLKN----------SL-LYEFACTNLVELRCIVDKAHRNQCQA-CRLKK 107
+K+ ++ +N SL YE + L EL V KAH+ + C+L K
Sbjct: 156 SKEAVRNDRNKKKKEVKEEGSLDSYELS-PQLEELITKVSKAHQETFPSLCQLGK 209
Score = 97 (39.2 bits), Expect = 0.00038, P = 0.00038
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI++K RN+CQ CRL+KC +GM+K+
Sbjct: 132 CIINKVTRNRCQYCRLQKCFEVGMSKE 158
>UNIPROTKB|F1PN60 [details] [associations]
symbol:RARG "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003708 "retinoic acid receptor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708 CTD:5916
GeneTree:ENSGT00680000099662 KO:K08529 OMA:RSPQPDQ
EMBL:AAEX03014990 EMBL:AAEX03014987 EMBL:AAEX03014988
EMBL:AAEX03014989 RefSeq:XP_849260.2 Ensembl:ENSCAFT00000011309
GeneID:486508 KEGG:cfa:486508 Uniprot:F1PN60
Length = 458
Score = 113 (44.8 bits), Expect = 7.1e-06, P = 7.1e-06
Identities = 37/115 (32%), Positives = 55/115 (47%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C CI++K RN+CQ CRL+KC +GM
Sbjct: 101 HYGVSSCEGCKGFFRRSI----QKNMVYTCHRDKN-CIINKVTRNRCQYCRLQKCFEVGM 155
Query: 65 NKDDAQHLKN----------SL-LYEFACTNLVELRCIVDKAHRNQCQA-CRLKK 107
+K+ ++ +N SL YE + L EL V KAH+ + C+L K
Sbjct: 156 SKEAVRNDRNKKKKEVKEEGSLDSYELS-PQLEELITKVSKAHQETFPSLCQLGK 209
Score = 97 (39.2 bits), Expect = 0.00038, P = 0.00038
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI++K RN+CQ CRL+KC +GM+K+
Sbjct: 132 CIINKVTRNRCQYCRLQKCFEVGMSKE 158
>UNIPROTKB|B0ZBF7 [details] [associations]
symbol:NR3C2 "Mineralocorticoid receptor 2" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 EMBL:EU326312 EMBL:FJ515829 EMBL:AC069272
EMBL:AC093678 EMBL:AC093881 EMBL:AC104691 HGNC:HGNC:7979
HOGENOM:HOG000247011 HOVERGEN:HBG006336 EMBL:AC106889
IPI:IPI00889506 SMR:B0ZBF7 STRING:B0ZBF7 Ensembl:ENST00000355292
Ensembl:ENST00000511528 OMA:FGSFPVH Uniprot:B0ZBF7
Length = 988
Score = 117 (46.2 bits), Expect = 7.3e-06, P = 7.3e-06
Identities = 24/61 (39%), Positives = 31/61 (50%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ +C+ +R + K C AG CI+DK R C ACRL+KCL GM
Sbjct: 614 HYGVVTCGSCKVFFKRAVEGKCSWQHNYLC-AGRNDCIIDKIRRKNCPACRLQKCLQAGM 672
Query: 65 N 65
N
Sbjct: 673 N 673
Score = 97 (39.2 bits), Expect = 0.0010, P = 0.0010
Identities = 19/42 (45%), Positives = 24/42 (57%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMN 114
K S + + C + CI+DK R C ACRL+KCL GMN
Sbjct: 634 KCSWQHNYLCAGRND--CIIDKIRRKNCPACRLQKCLQAGMN 673
>ZFIN|ZDB-GENE-070314-2 [details] [associations]
symbol:rxraa "retinoid X receptor, alpha a"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000003
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00545 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-070314-2
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00690000101777
InterPro:IPR021780 Pfam:PF11825 EMBL:CU062650 EMBL:BX001031
IPI:IPI00994409 ProteinModelPortal:F1R1Y8
Ensembl:ENSDART00000124173 ArrayExpress:F1R1Y8 Bgee:F1R1Y8
Uniprot:F1R1Y8
Length = 495
Score = 102 (41.0 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 16/30 (53%), Positives = 22/30 (73%)
Query: 41 CIVDKAHRNQCQACRLKKCLNMGMNKDDAQ 70
C++DK RN+CQ CR +KCL MGM ++ Q
Sbjct: 210 CVIDKRQRNRCQYCRYQKCLAMGMKREAVQ 239
Score = 99 (39.9 bits), Expect = 1.6e-05, Sum P(2) = 1.6e-05
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C++DK RN+CQ CR +KCL MGM ++
Sbjct: 210 CVIDKRQRNRCQYCRYQKCLAMGMKRE 236
Score = 32 (16.3 bits), Expect = 7.6e-06, Sum P(2) = 7.6e-06
Identities = 5/14 (35%), Positives = 8/14 (57%)
Query: 28 RNQCQACQAGTGRC 41
R + +AC +G C
Sbjct: 24 RGRAEACTCFSGMC 37
>UNIPROTKB|P18119 [details] [associations]
symbol:thrb-b "Thyroid hormone receptor beta-B"
species:8355 "Xenopus laevis" [GO:0004887 "thyroid hormone receptor
activity" evidence=TAS] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0004887 HOVERGEN:HBG005606
EMBL:M35362 EMBL:M35361 PIR:D36067 RefSeq:NP_001081250.1
UniGene:Xl.57134 ProteinModelPortal:P18119 SMR:P18119 PRIDE:P18119
GeneID:397734 KEGG:xla:397734 CTD:397734 Xenbase:XB-GENE-6252616
Uniprot:P18119
Length = 414
Score = 112 (44.5 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 27/71 (38%), Positives = 38/71 (53%)
Query: 14 CQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD----DA 69
C+ R I H + +C+ G+C++DK RNQCQ CR KKC +GM D D+
Sbjct: 80 CKGFFRRTIQKNLHPSY--SCKY-EGKCVIDKVTRNQCQECRFKKCKTVGMATDLVLDDS 136
Query: 70 QHL-KNSLLYE 79
+ L K L+ E
Sbjct: 137 KRLAKRKLIEE 147
Score = 107 (42.7 bits), Expect = 2.7e-05, P = 2.7e-05
Identities = 31/80 (38%), Positives = 42/80 (52%)
Query: 41 CIV--DKA--HRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAH 96
C+V DKA + +C C + C G + Q KN L ++C E +C++DK
Sbjct: 60 CVVCGDKATGYHYRCITC--EGC--KGFFRRTIQ--KN-LHPSYSCK--YEGKCVIDKVT 110
Query: 97 RNQCQACRLKKCLNMGMNKD 116
RNQCQ CR KKC +GM D
Sbjct: 111 RNQCQECRFKKCKTVGMATD 130
>WB|WBGene00011520 [details] [associations]
symbol:nhr-213 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 EMBL:Z81116
GeneTree:ENSGT00530000064622 PIR:T24574 RefSeq:NP_506974.1
UniGene:Cel.2441 ProteinModelPortal:O18048 SMR:O18048
DIP:DIP-24574N MINT:MINT-1077208 EnsemblMetazoa:T06C12.13
GeneID:188172 KEGG:cel:CELE_T06C12.13 UCSC:T06C12.13 CTD:188172
WormBase:T06C12.13 eggNOG:NOG291529 HOGENOM:HOG000018997
InParanoid:O18048 NextBio:937862 Uniprot:O18048
Length = 414
Score = 112 (44.5 bits), Expect = 7.8e-06, P = 7.8e-06
Identities = 24/71 (33%), Positives = 35/71 (49%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C A R +V R + C+ G C VD A R QC+ CR KC+++GM
Sbjct: 35 HFGVLACRACAAFFRRTVV--LERQKQYKCKKGKNECPVDTAERYQCRLCRYNKCVDLGM 92
Query: 65 NKDDAQHLKNS 75
++ Q + S
Sbjct: 93 TPENVQFNRES 103
>ZFIN|ZDB-GENE-080403-10 [details] [associations]
symbol:vdrb "vitamin D receptor b" species:7955
"Danio rerio" [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008434 "vitamin D3 receptor
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000324 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00350 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-080403-10 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0070561
GeneTree:ENSGT00680000099585 HOVERGEN:HBG108655
HOGENOM:HOG000220844 GO:GO:0008434 EMBL:EB970525 EMBL:DQ017633
IPI:IPI00500144 RefSeq:NP_001153457.1 UniGene:Dr.86291
ProteinModelPortal:Q1L673 SMR:Q1L673 Ensembl:ENSDART00000104116
Ensembl:ENSDART00000150885 GeneID:564511 KEGG:dre:564511 CTD:564511
eggNOG:NOG283526 InParanoid:Q1L673 OMA:NESFTMD OrthoDB:EOG4J6RR1
NextBio:20885416 Bgee:Q1L673 Uniprot:Q1L673
Length = 422
Score = 98 (39.6 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 16/29 (55%), Positives = 22/29 (75%)
Query: 39 GRCIVDKAHRNQCQACRLKKCLNMGMNKD 67
G C + K +R CQACRLK+CL++GM K+
Sbjct: 63 GSCTITKDNRRHCQACRLKRCLDIGMMKE 91
Score = 93 (37.8 bits), Expect = 0.00091, P = 0.00091
Identities = 15/27 (55%), Positives = 21/27 (77%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C + K +R CQACRLK+CL++GM K+
Sbjct: 65 CTITKDNRRHCQACRLKRCLDIGMMKE 91
Score = 34 (17.0 bits), Expect = 8.1e-06, Sum P(2) = 8.1e-06
Identities = 10/31 (32%), Positives = 14/31 (45%)
Query: 69 AQHLKNSLLYEFACTNLVELRCIVDKAHRNQ 99
A H LLY L +LR + ++ H Q
Sbjct: 366 AHHPGGRLLYAKMIQKLADLRSL-NEEHSKQ 395
>ZFIN|ZDB-GENE-980526-284 [details] [associations]
symbol:raraa "retinoic acid receptor, alpha a"
species:7955 "Danio rerio" [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IEA;IDA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA;IDA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0032526
"response to retinoic acid" evidence=IDA] [GO:0021575 "hindbrain
morphogenesis" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-284 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0032526
GO:GO:0021575 HOVERGEN:HBG005606 GO:GO:0003708 EMBL:S74155
EMBL:L03398 EMBL:BC092692 IPI:IPI00505878 PIR:I51256
RefSeq:NP_571481.2 UniGene:Dr.193 HSSP:P10276
ProteinModelPortal:Q90271 SMR:Q90271 STRING:Q90271
Ensembl:ENSDART00000079336 GeneID:30680 KEGG:dre:30680 CTD:30680
eggNOG:NOG297448 GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312
InParanoid:Q90271 KO:K08527 OMA:RTENVCI OrthoDB:EOG4F7NK7
NextBio:20807033 ArrayExpress:Q90271 Bgee:Q90271 Uniprot:Q90271
Length = 444
Score = 112 (44.5 bits), Expect = 8.7e-06, P = 8.7e-06
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C CI++K RN+CQ CRL+KCL +GM
Sbjct: 86 HYGVSACEGCKGFFRRSI----QKNMVYTCHREKN-CIINKVTRNRCQYCRLQKCLEVGM 140
Query: 65 NKDDAQHLKN 74
+K+ ++ +N
Sbjct: 141 SKESVRNDRN 150
Score = 104 (41.7 bits), Expect = 6.4e-05, P = 6.4e-05
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 87 ELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
E CI++K RN+CQ CRL+KCL +GM+K+
Sbjct: 114 EKNCIINKVTRNRCQYCRLQKCLEVGMSKE 143
>UNIPROTKB|F1NWE9 [details] [associations]
symbol:THRB "Thyroid hormone receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007621 "negative regulation of female
receptivity" evidence=IEA] [GO:0008016 "regulation of heart
contraction" evidence=IEA] [GO:0008050 "female courtship behavior"
evidence=IEA] [GO:0009887 "organ morphogenesis" evidence=IEA]
[GO:0019899 "enzyme binding" evidence=IEA] [GO:0031490 "chromatin
DNA binding" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR001728 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0008016 GO:GO:0000122
GO:GO:0031490 GO:GO:0004887 GeneTree:ENSGT00680000099662
OMA:HLIQATW EMBL:AADN02001118 EMBL:AADN02001120 EMBL:AADN02001121
EMBL:AADN02001122 EMBL:AADN02001123 EMBL:AADN02001124
EMBL:AADN02001119 IPI:IPI00822476 Ensembl:ENSGALT00000018424
ArrayExpress:F1NWE9 Uniprot:F1NWE9
Length = 445
Score = 112 (44.5 bits), Expect = 8.8e-06, P = 8.8e-06
Identities = 27/71 (38%), Positives = 38/71 (53%)
Query: 14 CQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD----DA 69
C+ R I H +C+ G+C++DK RNQCQ CR KKC+ +GM D D+
Sbjct: 111 CKGFFRRTIQKNLHPTY--SCKY-EGKCVIDKVTRNQCQECRFKKCIFVGMATDLVLDDS 167
Query: 70 QHL-KNSLLYE 79
+ L K L+ E
Sbjct: 168 KRLAKRKLIEE 178
Score = 107 (42.7 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 31/80 (38%), Positives = 43/80 (53%)
Query: 41 CIV--DKA--HRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAH 96
C+V DKA + +C C + C G + Q KN L ++C E +C++DK
Sbjct: 91 CVVCGDKATGYHYRCITC--EGC--KGFFRRTIQ--KN-LHPTYSCK--YEGKCVIDKVT 141
Query: 97 RNQCQACRLKKCLNMGMNKD 116
RNQCQ CR KKC+ +GM D
Sbjct: 142 RNQCQECRFKKCIFVGMATD 161
>UNIPROTKB|O97726 [details] [associations]
symbol:NOR-1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000108 "positive regulation of leukocyte apoptotic
process" evidence=IEA] [GO:0060005 "vestibular reflex"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0045787 "positive regulation of
cell cycle" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA] [GO:0033554 "cellular response to
stress" evidence=IEA] [GO:0030534 "adult behavior" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0001707 "mesoderm formation"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003072 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01286 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0007411 GO:GO:0021766
GO:GO:0033554 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0050885 GO:GO:0043524 GO:GO:0005667
GO:GO:0001077 GO:GO:0001707 GO:GO:0030534 GO:GO:0030522
GO:GO:0045787 GO:GO:0048752 eggNOG:NOG245120
GeneTree:ENSGT00640000091364 HOGENOM:HOG000230925
HOVERGEN:HBG052663 HSSP:P43354 KO:K08559 OMA:PSTSMYF
OrthoDB:EOG4894MB GO:GO:2000108 GO:GO:0060005 EMBL:CU302447
EMBL:CU210903 EMBL:AJ011767 RefSeq:NP_999412.1 UniGene:Ssc.761
SMR:O97726 STRING:O97726 Ensembl:ENSSSCT00000005925 GeneID:397479
KEGG:ssc:397479 CTD:397479 Uniprot:O97726
Length = 643
Score = 114 (45.2 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 39/121 (32%), Positives = 56/121 (46%)
Query: 1 MTFRHDGMTDHPTCQA--GTERCIVDKAHRNQCQACQAGTGRCIV--DKAHRNQCQACRL 56
+ F G+T PT + G + +R+ +G G C V D A CQ +
Sbjct: 271 LAFSPLGLTTSPTTSSLLGESPSLPSPPNRSTA----SGEGTCAVCGDNA---ACQHYGV 323
Query: 57 KKCLNM-GMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNK 115
+ C G K Q KN+ ++ C L C VDK RN+CQ CR +KCL++GM K
Sbjct: 324 RTCEGCKGFFKRTVQ--KNA---KYVC--LANKNCPVDKRRRNRCQYCRFQKCLSVGMVK 376
Query: 116 D 116
+
Sbjct: 377 E 377
>UNIPROTKB|K7GQF7 [details] [associations]
symbol:NR3C2 "Mineralocorticoid receptor" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PROSITE:PS51030 SMART:SM00399
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GeneTree:ENSGT00700000104072 EMBL:FP102763 EMBL:FP245521
Ensembl:ENSSSCT00000033458 Uniprot:K7GQF7
Length = 87
Score = 103 (41.3 bits), Expect = 9.0e-06, P = 9.0e-06
Identities = 18/30 (60%), Positives = 20/30 (66%)
Query: 36 AGTGRCIVDKAHRNQCQACRLKKCLNMGMN 65
AG CI+DK R C ACRL+KCL GMN
Sbjct: 8 AGRNDCIIDKIRRKNCPACRLQKCLQAGMN 37
Score = 99 (39.9 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 17/28 (60%), Positives = 19/28 (67%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKDG 117
CI+DK R C ACRL+KCL GMN G
Sbjct: 13 CIIDKIRRKNCPACRLQKCLQAGMNLGG 40
>UNIPROTKB|F1Q075 [details] [associations]
symbol:NR1I2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0046618 "drug export" evidence=IEA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0042908 "xenobiotic transport"
evidence=IEA] [GO:0042738 "exogenous drug catabolic process"
evidence=IEA] [GO:0008144 "drug binding" evidence=IEA] [GO:0006805
"xenobiotic metabolic process" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0045892
GO:GO:0045893 GO:GO:0046872 GO:GO:0008144 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0046618 GO:GO:0006805
GO:GO:0042738 GeneTree:ENSGT00680000099585 OMA:YIECNRP
GO:GO:0042908 EMBL:AAEX03017018 EMBL:AAEX03017017
Ensembl:ENSCAFT00000017654 Uniprot:F1Q075
Length = 439
Score = 99 (39.9 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 21/55 (38%), Positives = 27/55 (49%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD 67
TC+ G + RN C G C + + R QCQ CRL+KCL GM K+
Sbjct: 64 TCE-GCKGFFRRTVKRNTRLRCPFRKGTCEITRKTRRQCQPCRLRKCLESGMKKE 117
Score = 33 (16.7 bits), Expect = 9.0e-06, Sum P(2) = 9.0e-06
Identities = 7/15 (46%), Positives = 9/15 (60%)
Query: 103 CRLKKCLNMGMNKDG 117
C LK CL + +DG
Sbjct: 214 CSLKVCLRL-RGEDG 227
>ZFIN|ZDB-GENE-980526-72 [details] [associations]
symbol:rarab "retinoic acid receptor, alpha b"
species:7955 "Danio rerio" [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=IEA] [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0003708
"retinoic acid receptor activity" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0033339 "pectoral fin development" evidence=IDA] [GO:0046872
"metal ion binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-980526-72 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00680000099662 EMBL:BX537121 EMBL:CR392003
IPI:IPI00993231 Ensembl:ENSDART00000126022 Uniprot:E7EZ95
Length = 460
Score = 112 (44.5 bits), Expect = 9.2e-06, P = 9.2e-06
Identities = 24/70 (34%), Positives = 38/70 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C CI++K RN+CQ CRL+KCL +GM
Sbjct: 96 HYGVSACEGCKGFFRRSI----QKNMVYTCHREKS-CIINKVTRNRCQYCRLQKCLEVGM 150
Query: 65 NKDDAQHLKN 74
+K+ ++ +N
Sbjct: 151 SKESVRNDRN 160
Score = 103 (41.3 bits), Expect = 8.6e-05, P = 8.6e-05
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 87 ELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
E CI++K RN+CQ CRL+KCL +GM+K+
Sbjct: 124 EKSCIINKVTRNRCQYCRLQKCLEVGMSKE 153
>UNIPROTKB|F1Q2H9 [details] [associations]
symbol:ESR2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00700000104072 OMA:LYAEPQK
InterPro:IPR021064 Pfam:PF12497 EMBL:AAEX03005777
Ensembl:ENSCAFT00000025107 Uniprot:F1Q2H9
Length = 549
Score = 113 (44.8 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 33/106 (31%), Positives = 53/106 (50%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 179 HYGVWSCEGCKAFFKRSI--QGHNDYI--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 233
Query: 65 NKDDAQHLKNSL-LYEFACTNLVELRCIVDKAHRNQCQACRLKKCL 109
K ++ + + ++ +L C+ KA +N R+K+ L
Sbjct: 234 VKCGSRRERCGYRVMRRQKSSDEQLHCL-SKAKKNGGHVTRVKELL 278
>UNIPROTKB|G1K325 [details] [associations]
symbol:NR3C2 "Mineralocorticoid receptor" species:9031
"Gallus gallus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0006883 "cellular sodium ion
homeostasis" evidence=IEA] [GO:0007588 "excretion" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00700000104072
OMA:FGSFPVH EMBL:AADN02016198 EMBL:AADN02016196 EMBL:AADN02016197
Ensembl:ENSGALT00000016302 Uniprot:G1K325
Length = 985
Score = 116 (45.9 bits), Expect = 9.3e-06, P = 9.3e-06
Identities = 24/61 (39%), Positives = 31/61 (50%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ +C+ +R + K C AG CI+DK R C ACRL+KCL GM
Sbjct: 615 HYGVVTCGSCKVFFKRAVEGKNSGQHNYLC-AGRNDCIIDKIRRKNCPACRLQKCLQAGM 673
Query: 65 N 65
N
Sbjct: 674 N 674
Score = 104 (41.7 bits), Expect = 0.00018, P = 0.00018
Identities = 20/42 (47%), Positives = 25/42 (59%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMN 114
KNS + + C + CI+DK R C ACRL+KCL GMN
Sbjct: 635 KNSGQHNYLCAGRND--CIIDKIRRKNCPACRLQKCLQAGMN 674
>RGD|3534 [details] [associations]
symbol:Rara "retinoic acid receptor, alpha" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=ISO] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000900 "translation repressor activity,
nucleic acid binding" evidence=IDA] [GO:0001657 "ureteric bud
development" evidence=ISO] [GO:0001889 "liver development"
evidence=IEP] [GO:0001972 "retinoic acid binding" evidence=ISO]
[GO:0003417 "growth plate cartilage development" evidence=ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003708 "retinoic acid receptor activity"
evidence=ISO;IDA;TAS] [GO:0003713 "transcription coactivator
activity" evidence=ISO] [GO:0003714 "transcription corepressor
activity" evidence=ISO] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription factor
activity" evidence=ISO] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005737 "cytoplasm"
evidence=ISO;IDA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0006468 "protein phosphorylation"
evidence=ISO] [GO:0006950 "response to stress" evidence=IEP]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0007281 "germ
cell development" evidence=ISO] [GO:0007283 "spermatogenesis"
evidence=ISO] [GO:0007565 "female pregnancy" evidence=IEP]
[GO:0008134 "transcription factor binding" evidence=ISO;IPI]
[GO:0008144 "drug binding" evidence=IDA] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO] [GO:0008285 "negative
regulation of cell proliferation" evidence=IDA] [GO:0008584 "male
gonad development" evidence=IDA] [GO:0010628 "positive regulation of
gene expression" evidence=ISO] [GO:0010629 "negative regulation of
gene expression" evidence=ISO] [GO:0017148 "negative regulation of
translation" evidence=IDA] [GO:0019899 "enzyme binding" evidence=ISO]
[GO:0019904 "protein domain specific binding" evidence=ISO]
[GO:0021766 "hippocampus development" evidence=IEP] [GO:0030425
"dendrite" evidence=ISO;IDA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=ISO] [GO:0030522 "intracellular
receptor mediated signaling pathway" evidence=ISO] [GO:0030850
"prostate gland development" evidence=IEP] [GO:0030852 "regulation of
granulocyte differentiation" evidence=ISO] [GO:0030853 "negative
regulation of granulocyte differentiation" evidence=ISO] [GO:0031490
"chromatin DNA binding" evidence=ISO] [GO:0031641 "regulation of
myelination" evidence=IDA] [GO:0032355 "response to estradiol
stimulus" evidence=IEP;ISO] [GO:0032526 "response to retinoic acid"
evidence=ISO] [GO:0032689 "negative regulation of interferon-gamma
production" evidence=ISO] [GO:0032720 "negative regulation of tumor
necrosis factor production" evidence=ISO] [GO:0032736 "positive
regulation of interleukin-13 production" evidence=ISO] [GO:0032753
"positive regulation of interleukin-4 production" evidence=ISO]
[GO:0032754 "positive regulation of interleukin-5 production"
evidence=ISO] [GO:0033189 "response to vitamin A" evidence=IEP]
[GO:0034097 "response to cytokine stimulus" evidence=IEP] [GO:0035264
"multicellular organism growth" evidence=ISO] [GO:0042981 "regulation
of apoptotic process" evidence=IDA] [GO:0043005 "neuron projection"
evidence=IDA] [GO:0043025 "neuronal cell body" evidence=ISO]
[GO:0043277 "apoptotic cell clearance" evidence=ISO] [GO:0043422
"protein kinase B binding" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0044323 "retinoic acid-responsive element binding" evidence=ISO]
[GO:0045471 "response to ethanol" evidence=IDA] [GO:0045596 "negative
regulation of cell differentiation" evidence=ISO] [GO:0045630
"positive regulation of T-helper 2 cell differentiation"
evidence=ISO] [GO:0045666 "positive regulation of neuron
differentiation" evidence=IDA] [GO:0045787 "positive regulation of
cell cycle" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0045947 "negative regulation of
translational initiation" evidence=ISO] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048027 "mRNA 5'-UTR
binding" evidence=IDA] [GO:0048167 "regulation of synaptic
plasticity" evidence=IDA] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=ISO;IDA] [GO:0048471 "perinuclear region
of cytoplasm" evidence=IDA] [GO:0051018 "protein kinase A binding"
evidence=ISO] [GO:0051099 "positive regulation of binding"
evidence=ISO] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=ISO] [GO:0060010 "Sertoli cell fate
commitment" evidence=ISO] [GO:0060591 "chondroblast differentiation"
evidence=ISO] [GO:0061037 "negative regulation of cartilage
development" evidence=ISO] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=ISO] [GO:0071300 "cellular response to
retinoic acid" evidence=ISO] [GO:0071391 "cellular response to
estrogen stimulus" evidence=ISO] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 RGD:3534 GO:GO:0005634 GO:GO:0048471
GO:GO:0048167 GO:GO:0008285 GO:GO:0006950 GO:GO:0042981 GO:GO:0032355
GO:GO:0045471 GO:GO:0046872 GO:GO:0008144 GO:GO:0030425 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0034097 GO:GO:0007565 GO:GO:0008584
GO:GO:0048027 GO:GO:0045666 GO:GO:0030850 GO:GO:0033189 GO:GO:0000900
GO:GO:0031641 HOVERGEN:HBG005606 GO:GO:0003708 HSSP:P10276
HOGENOM:HOG000010312 OrthoDB:EOG4F7NK7 UniGene:Rn.91057 EMBL:AJ002940
IPI:IPI00389542 ProteinModelPortal:Q9QWT4 STRING:Q9QWT4 UCSC:RGD:3534
InParanoid:Q9QWT4 Genevestigator:Q9QWT4 Uniprot:Q9QWT4
Length = 302
Score = 109 (43.4 bits), Expect = 9.6e-06, P = 9.6e-06
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C CI++K RN+CQ CRL+KC +GM
Sbjct: 82 HYGVSACEGCKGFFRRSI----QKNMVYTCHRDKN-CIINKVTRNRCQYCRLQKCFEVGM 136
Query: 65 NKDDAQHLKN 74
+K+ ++ +N
Sbjct: 137 SKESVRNDRN 146
Score = 97 (39.2 bits), Expect = 0.00020, P = 0.00020
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI++K RN+CQ CRL+KC +GM+K+
Sbjct: 113 CIINKVTRNRCQYCRLQKCFEVGMSKE 139
>UNIPROTKB|Q9IAK1 [details] [associations]
symbol:esr2 "Estrogen receptor beta" species:7998
"Ictalurus punctatus" [GO:0003677 "DNA binding" evidence=ISS]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IDA]
[GO:0005496 "steroid binding" evidence=IDA] [GO:0008406 "gonad
development" evidence=TAS] [GO:0009410 "response to xenobiotic
stimulus" evidence=TAS] [GO:0030284 "estrogen receptor activity"
evidence=IDA] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IDA] [GO:0042562 "hormone binding"
evidence=IDA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0008406
GO:GO:0005496 GO:GO:0046872 GO:GO:0003677 GO:GO:0004879
GO:GO:0043565 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0042562 GO:GO:0009410 HOVERGEN:HBG108344
GO:GO:0030284 InterPro:IPR021064 Pfam:PF12497 EMBL:AF185568
RefSeq:NP_001187012.1 UniGene:Ipu.46540 ProteinModelPortal:Q9IAK1
SMR:Q9IAK1 GeneID:100304489 Uniprot:Q9IAK1
Length = 575
Score = 113 (44.8 bits), Expect = 9.9e-06, P = 9.9e-06
Identities = 27/66 (40%), Positives = 36/66 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC MGM
Sbjct: 172 HYGVWSCEGCKAFFKRSI--QGHNDYI--CPA-TNQCTIDKNRRKSCQACRLRKCYEMGM 226
Query: 65 NKDDAQ 70
K A+
Sbjct: 227 MKCGAR 232
Score = 99 (39.9 bits), Expect = 0.00031, P = 0.00031
Identities = 17/29 (58%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC MGM K G
Sbjct: 202 QCTIDKNRRKSCQACRLRKCYEMGMMKCG 230
>ZFIN|ZDB-GENE-000210-31 [details] [associations]
symbol:vdra "vitamin D receptor a" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008434 "vitamin
D3 receptor activity" evidence=IEA] [GO:0005499 "vitamin D binding"
evidence=IDA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISS;IDA] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=ISS;IDA] [GO:0055074 "calcium ion
homeostasis" evidence=IMP] [GO:0001503 "ossification" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA;IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] InterPro:IPR000324
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00350 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-000210-31
GO:GO:0005634 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0001503 GO:GO:0055074 GO:GO:0005499
GO:GO:0070561 PDB:2HBH PDB:2HC4 PDB:2HCD PDB:3DR1 PDB:4G1D PDB:4G1Y
PDB:4G1Z PDB:4G20 PDB:4G21 PDB:4G2H PDBsum:2HBH PDBsum:2HC4
PDBsum:2HCD PDBsum:3DR1 PDBsum:4G1D PDBsum:4G1Y PDBsum:4G1Z
PDBsum:4G20 PDBsum:4G21 PDBsum:4G2H PDB:3O1D PDB:3O1E PDB:4FHH
PDB:4FHI PDBsum:3O1D PDBsum:3O1E PDBsum:4FHH PDBsum:4FHI
HOVERGEN:HBG108655 EMBL:AF164512 EMBL:BC162213 EMBL:BC162226
IPI:IPI00495038 RefSeq:NP_570994.1 UniGene:Dr.81313 PRIDE:Q9PTN2
GeneID:30076 KEGG:dre:30076 CTD:30076 KO:K08539
EvolutionaryTrace:Q9PTN2 NextBio:20806561 GO:GO:0008434
Uniprot:Q9PTN2
Length = 453
Score = 97 (39.2 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 15/29 (51%), Positives = 22/29 (75%)
Query: 39 GRCIVDKAHRNQCQACRLKKCLNMGMNKD 67
G C + K +R CQACRLK+C+++GM K+
Sbjct: 96 GNCTITKDNRRHCQACRLKRCIDIGMMKE 124
Score = 35 (17.4 bits), Expect = 1.0e-05, Sum P(2) = 1.0e-05
Identities = 10/30 (33%), Positives = 14/30 (46%)
Query: 70 QHLKNSLLYEFACTNLVELRCIVDKAHRNQ 99
QH LLY L +LR + ++ H Q
Sbjct: 398 QHPGGRLLYAKMIQKLADLRSL-NEEHSKQ 426
>UNIPROTKB|F1LP32 [details] [associations]
symbol:Thrb "Thyroid hormone receptor beta" species:10116
"Rattus norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:3858 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0008016 GO:GO:0000122
GO:GO:0009887 GO:GO:0007605 GO:GO:0031490 GO:GO:0004887
GO:GO:0007621 GO:GO:0008050 GeneTree:ENSGT00680000099662
IPI:IPI00655326 Ensembl:ENSRNOT00000061402 ArrayExpress:F1LP32
Uniprot:F1LP32
Length = 492
Score = 112 (44.5 bits), Expect = 1.0e-05, P = 1.0e-05
Identities = 23/46 (50%), Positives = 30/46 (65%)
Query: 39 GRCIVDKAHRNQCQACRLKKCLNMGMNKD----DAQHL-KNSLLYE 79
G+CI+DK RNQCQ CR KKC+ +GM D D++ L K L+ E
Sbjct: 180 GKCIIDKVTRNQCQECRFKKCIYVGMATDLVLDDSKRLAKRKLIEE 225
Score = 110 (43.8 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 72 LKNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
++ SL ++C E +CI+DK RNQCQ CR KKC+ +GM D
Sbjct: 166 IQKSLHPSYSCK--YEGKCIIDKVTRNQCQECRFKKCIYVGMATD 208
>UNIPROTKB|Q92570 [details] [associations]
symbol:NR4A3 "Nuclear receptor subfamily 4 group A member
3" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001707 "mesoderm formation" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0030534 "adult behavior" evidence=IEA]
[GO:0031100 "organ regeneration" evidence=IEA] [GO:0033554
"cellular response to stress" evidence=IEA] [GO:0043434 "response
to peptide hormone stimulus" evidence=IEA] [GO:0043524 "negative
regulation of neuron apoptotic process" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0045787 "positive
regulation of cell cycle" evidence=IEA] [GO:0048752 "semicircular
canal morphogenesis" evidence=IEA] [GO:0050885 "neuromuscular
process controlling balance" evidence=IEA] [GO:0060005 "vestibular
reflex" evidence=IEA] [GO:2000108 "positive regulation of leukocyte
apoptotic process" evidence=IEA] [GO:0005634 "nucleus"
evidence=NAS] [GO:0008150 "biological_process" evidence=ND]
[GO:0003677 "DNA binding" evidence=NAS] [GO:0004887 "thyroid
hormone receptor activity" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003072 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01286 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0007411 GO:GO:0021766
GO:GO:0005654 GO:GO:0033554 GO:GO:0046872 GO:GO:0003677
GO:GO:0031100 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0043434
GO:GO:0050885 GO:GO:0043524 GO:GO:0005667 GO:GO:0001077
EMBL:CH471105 GO:GO:0001707 GO:GO:0030534 GO:GO:0006367
GO:GO:0045787 GO:GO:0004887 GO:GO:0048752 MIM:612219 EMBL:AL358937
eggNOG:NOG245120 HOVERGEN:HBG052663 EMBL:D78579 EMBL:U12767
EMBL:S81243 EMBL:X89894 EMBL:AL359710 EMBL:D85241 EMBL:D85242
IPI:IPI00293038 IPI:IPI00328269 IPI:IPI00334557 PIR:S71930
RefSeq:NP_008912.2 RefSeq:NP_775291.1 RefSeq:NP_775292.1
UniGene:Hs.279522 ProteinModelPortal:Q92570 SMR:Q92570
STRING:Q92570 PhosphoSite:Q92570 DMDM:90110039 PaxDb:Q92570
PRIDE:Q92570 DNASU:8013 Ensembl:ENST00000330847
Ensembl:ENST00000338488 Ensembl:ENST00000395097 GeneID:8013
KEGG:hsa:8013 UCSC:uc004bae.3 UCSC:uc004baf.1 UCSC:uc022bky.1
CTD:8013 GeneCards:GC09P102584 HGNC:HGNC:7982 HPA:HPA043360
MIM:600542 neXtProt:NX_Q92570 PharmGKB:PA31763 InParanoid:Q92570
KO:K08559 OMA:PSTSMYF OrthoDB:EOG4894MB ChEMBL:CHEMBL1961792
ChiTaRS:NR4A3 GenomeRNAi:8013 NextBio:30567 ArrayExpress:Q92570
Bgee:Q92570 CleanEx:HS_NR4A3 CleanEx:HS_TEC Genevestigator:Q92570
GermOnline:ENSG00000119508 GO:GO:2000108 GO:GO:0060005
Uniprot:Q92570
Length = 626
Score = 113 (44.8 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 38/115 (33%), Positives = 53/115 (46%)
Query: 7 GMTDHPTCQA--GTERCIVDKAHRNQCQACQAGTGRCIV--DKAHRNQCQACRLKKCLNM 62
G+T PT + G + R+ +G G C V D A CQ ++ C
Sbjct: 260 GLTPSPTASSLLGESPSLPSPPSRSS----SSGEGTCAVCGDNA---ACQHYGVRTCEGC 312
Query: 63 -GMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
G K Q KN+ ++ C L C VDK RN+CQ CR +KCL++GM K+
Sbjct: 313 KGFFKRTVQ--KNA---KYVC--LANKNCPVDKRRRNRCQYCRFQKCLSVGMVKE 360
>UNIPROTKB|Q9XSB5 [details] [associations]
symbol:ESR2 "Estrogen receptor beta" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=IEA]
[GO:0060743 "epithelial cell maturation involved in prostate gland
development" evidence=IEA] [GO:0060740 "prostate gland epithelium
morphogenesis" evidence=IEA] [GO:0060068 "vagina development"
evidence=IEA] [GO:0060065 "uterus development" evidence=IEA]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0050680 "negative
regulation of epithelial cell proliferation" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0034056 "estrogen response element binding"
evidence=IEA] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0007420 "brain development" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0001764 "neuron
migration" evidence=IEA] [GO:0001541 "ovarian follicle development"
evidence=IEA] [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005739
GO:GO:0005634 GO:GO:0001764 GO:GO:0007420 GO:GO:0051091
GO:GO:0005496 GO:GO:0046872 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0000122 GO:GO:0043065 GO:GO:0001541
GO:GO:0050680 GO:GO:0060740 GeneTree:ENSGT00700000104072
GO:GO:0030520 GO:GO:0060068 GO:GO:0001046 GO:GO:0060766
HOVERGEN:HBG108344 HOGENOM:HOG000233468 GO:GO:0034056 GO:GO:0060065
EMBL:AF110402 EMBL:Y18017 IPI:IPI00692499 RefSeq:NP_776476.2
UniGene:Bt.541 ProteinModelPortal:Q9XSB5 SMR:Q9XSB5 STRING:Q9XSB5
Ensembl:ENSBTAT00000005899 GeneID:281146 KEGG:bta:281146 CTD:2100
eggNOG:NOG271979 InParanoid:Q9XSB5 KO:K08551 OMA:LYAEPQK
OrthoDB:EOG41RPTT ChEMBL:CHEMBL2404 NextBio:20805210 GO:GO:0060743
InterPro:IPR021064 Pfam:PF12497 Uniprot:Q9XSB5
Length = 527
Score = 112 (44.5 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 35/106 (33%), Positives = 50/106 (47%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 157 HYGVWSCEGCKAFFKRSI--QGHNDYI--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 211
Query: 65 NKDDAQHLKNSLLYEFACTNLVE-LRCIVDKAHRNQCQACRLKKCL 109
K ++ + N E L C+ K RN R+K+ L
Sbjct: 212 VKCGSRRERCGYRIVRRQRNSDEQLHCL-SKTKRNGGPMTRVKELL 256
Score = 94 (38.1 bits), Expect = 0.00097, P = 0.00097
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 187 QCTIDKNRRKSCQACRLRKCYEVGMVKCG 215
>UNIPROTKB|H0YLS5 [details] [associations]
symbol:RORA "Nuclear receptor ROR-alpha" species:9606 "Homo
sapiens" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR001628
InterPro:IPR008946 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
GO:GO:0003700 GO:GO:0006351 EMBL:AC087385 EMBL:AC009560
EMBL:AC012404 EMBL:AC022898 EMBL:AC079068 EMBL:AC107241
EMBL:AC107905 HGNC:HGNC:10258 ChiTaRS:RORA Ensembl:ENST00000559343
Bgee:H0YLS5 Uniprot:H0YLS5
Length = 153
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 16/37 (43%), Positives = 27/37 (72%)
Query: 80 FACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
++C + C++D+ RN+CQ CRL+KCL +GM++D
Sbjct: 109 YSCPR--QKNCLIDRTSRNRCQHCRLQKCLAVGMSRD 143
Score = 102 (41.0 bits), Expect = 1.1e-05, P = 1.1e-05
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD 67
TC+ G + N +C C++D+ RN+CQ CRL+KCL +GM++D
Sbjct: 91 TCE-GCKGFFRRSQQSNATYSCPRQKN-CLIDRTSRNRCQHCRLQKCLAVGMSRD 143
>UNIPROTKB|J3KSJ4 [details] [associations]
symbol:RARA "Retinoic acid receptor alpha" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0003417 "growth plate cartilage
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0007283
"spermatogenesis" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010628 "positive regulation of gene
expression" evidence=IEA] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IEA] [GO:0030425
"dendrite" evidence=IEA] [GO:0030852 "regulation of granulocyte
differentiation" evidence=IEA] [GO:0032526 "response to retinoic
acid" evidence=IEA] [GO:0035014 "phosphatidylinositol 3-kinase
regulator activity" evidence=IEA] [GO:0035264 "multicellular
organism growth" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0045596 "negative regulation of cell
differentiation" evidence=IEA] [GO:0045947 "negative regulation of
translational initiation" evidence=IEA] [GO:0051897 "positive
regulation of protein kinase B signaling cascade" evidence=IEA]
[GO:0055012 "ventricular cardiac muscle cell differentiation"
evidence=IEA] [GO:0060010 "Sertoli cell fate commitment"
evidence=IEA] [GO:0060591 "chondroblast differentiation"
evidence=IEA] [GO:0061037 "negative regulation of cartilage
development" evidence=IEA] [GO:0070374 "positive regulation of ERK1
and ERK2 cascade" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS51030 SMART:SM00399
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003708 EMBL:AC080112 HGNC:HGNC:9864 ChiTaRS:RARA
Ensembl:ENST00000475125 Uniprot:J3KSJ4
Length = 186
Score = 103 (41.3 bits), Expect = 1.2e-05, P = 1.2e-05
Identities = 16/34 (47%), Positives = 26/34 (76%)
Query: 41 CIVDKAHRNQCQACRLKKCLNMGMNKDDAQHLKN 74
CI++K RN+CQ CRL+KC +GM+K+ ++ +N
Sbjct: 11 CIINKVTRNRCQYCRLQKCFEVGMSKESVRNDRN 44
Score = 97 (39.2 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI++K RN+CQ CRL+KC +GM+K+
Sbjct: 11 CIINKVTRNRCQYCRLQKCFEVGMSKE 37
>ZFIN|ZDB-GENE-990415-250 [details] [associations]
symbol:rorca "RAR-related orphan receptor C a"
species:7955 "Danio rerio" [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003079 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01293 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-990415-250 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
GeneTree:ENSGT00700000104109 EMBL:CR450766 IPI:IPI00844980
ProteinModelPortal:F1QGI9 Ensembl:ENSDART00000100484 Bgee:F1QGI9
Uniprot:F1QGI9
Length = 480
Score = 111 (44.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 19/44 (43%), Positives = 33/44 (75%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+N+ +Y +C+ + CI+D+ +RN+CQ CRL+KCL +GM++D
Sbjct: 39 QNNAMY--SCSR--QRNCIIDRTNRNRCQHCRLQKCLALGMSRD 78
Score = 109 (43.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD 67
TC+ G + N +C CI+D+ +RN+CQ CRL+KCL +GM++D
Sbjct: 26 TCE-GCKGFFRRSQQNNAMYSCSRQRN-CIIDRTNRNRCQHCRLQKCLALGMSRD 78
>UNIPROTKB|F6SD09 [details] [associations]
symbol:ESR1 "Estrogen receptor" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 EMBL:AL356311
EMBL:AL049821 EMBL:AL078582 EMBL:AL590993 HGNC:HGNC:3467
ChiTaRS:ESR1 EMBL:AL035695 IPI:IPI00922288
ProteinModelPortal:F6SD09 SMR:F6SD09 Ensembl:ENST00000544394
UCSC:uc011eey.2 ArrayExpress:F6SD09 Bgee:F6SD09 Uniprot:F6SD09
Length = 310
Score = 108 (43.1 bits), Expect = 1.3e-05, P = 1.3e-05
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 23 HYGVWSCEGCKAFFKRSI--QGHNDYM--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 77
Query: 65 NK 66
K
Sbjct: 78 MK 79
Score = 97 (39.2 bits), Expect = 0.00021, P = 0.00021
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 53 QCTIDKNRRKSCQACRLRKCYEVGMMKGG 81
>UNIPROTKB|K7GL45 [details] [associations]
symbol:NR3C1 "Glucocorticoid receptor" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GeneTree:ENSGT00700000104072 EMBL:CU928713
Ensembl:ENSSSCT00000036693 Uniprot:K7GL45
Length = 379
Score = 109 (43.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/72 (36%), Positives = 36/72 (50%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ +C+ +R V+ H C AG CI+DK R C ACR +KCL GM
Sbjct: 34 HYGVLTCGSCKVFFKRA-VEGQHNYLC----AGRNDCIIDKIRRKNCPACRYRKCLQAGM 88
Query: 65 NKDDAQHLKNSL 76
N + A+ K +
Sbjct: 89 NLE-ARKTKKKI 99
Score = 94 (38.1 bits), Expect = 0.00061, P = 0.00061
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKDGK 118
CI+DK R C ACR +KCL GMN + +
Sbjct: 65 CIIDKIRRKNCPACRYRKCLQAGMNLEAR 93
>UNIPROTKB|B7Z7I2 [details] [associations]
symbol:NR3C1 "cDNA FLJ50281, highly similar to
Glucocorticoid receptor" species:9606 "Homo sapiens" [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 HOVERGEN:HBG007583 EMBL:AC004782
EMBL:AC091925 UniGene:Hs.122926 HGNC:HGNC:7978 ChiTaRS:NR3C1
EMBL:AK302050 IPI:IPI00976066 SMR:B7Z7I2 STRING:B7Z7I2
Ensembl:ENST00000416954 UCSC:uc011dbk.2 Uniprot:B7Z7I2
Length = 380
Score = 109 (43.4 bits), Expect = 1.4e-05, P = 1.4e-05
Identities = 26/72 (36%), Positives = 36/72 (50%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ +C+ +R V+ H C AG CI+DK R C ACR +KCL GM
Sbjct: 35 HYGVLTCGSCKVFFKRA-VEGQHNYLC----AGRNDCIIDKIRRKNCPACRYRKCLQAGM 89
Query: 65 NKDDAQHLKNSL 76
N + A+ K +
Sbjct: 90 NLE-ARKTKKKI 100
Score = 94 (38.1 bits), Expect = 0.00061, P = 0.00061
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKDGK 118
CI+DK R C ACR +KCL GMN + +
Sbjct: 66 CIIDKIRRKNCPACRYRKCLQAGMNLEAR 94
>UNIPROTKB|E1B7S6 [details] [associations]
symbol:NR4A3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000108 "positive regulation of leukocyte apoptotic
process" evidence=IEA] [GO:0060005 "vestibular reflex"
evidence=IEA] [GO:0050885 "neuromuscular process controlling
balance" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0045787 "positive regulation of
cell cycle" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0043524 "negative regulation of neuron
apoptotic process" evidence=IEA] [GO:0033554 "cellular response to
stress" evidence=IEA] [GO:0030534 "adult behavior" evidence=IEA]
[GO:0021766 "hippocampus development" evidence=IEA] [GO:0007411
"axon guidance" evidence=IEA] [GO:0005667 "transcription factor
complex" evidence=IEA] [GO:0001707 "mesoderm formation"
evidence=IEA] [GO:0001077 "RNA polymerase II core promoter proximal
region sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003072 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01286 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0007411 GO:GO:0021766
GO:GO:0033554 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0050885 GO:GO:0043524 GO:GO:0005667
GO:GO:0001077 GO:GO:0001707 GO:GO:0030534 GO:GO:0030522
GO:GO:0045787 GO:GO:0048752 GeneTree:ENSGT00640000091364
OMA:PSTSMYF GO:GO:2000108 GO:GO:0060005 EMBL:DAAA02023278
EMBL:DAAA02023279 IPI:IPI00701881 Ensembl:ENSBTAT00000002429
Uniprot:E1B7S6
Length = 637
Score = 112 (44.5 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 38/115 (33%), Positives = 53/115 (46%)
Query: 7 GMTDHPTCQA--GTERCIVDKAHRNQCQACQAGTGRCIV--DKAHRNQCQACRLKKCLNM 62
G+T PT + G + R+ +G G C V D A CQ ++ C
Sbjct: 271 GLTASPTASSLLGESPSLPSPPSRSSA----SGEGTCAVCGDNA---ACQHYGVRTCEGC 323
Query: 63 -GMNKDDAQHLKNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
G K Q KN+ ++ C L C VDK RN+CQ CR +KCL++GM K+
Sbjct: 324 KGFFKRTVQ--KNA---KYVC--LANKNCPVDKRRRNRCQYCRFQKCLSVGMVKE 371
>UNIPROTKB|P13631 [details] [associations]
symbol:RARG "Retinoic acid receptor gamma" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0003430 "growth plate cartilage chondrocyte growth"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0009952 "anterior/posterior
pattern specification" evidence=IEA] [GO:0031641 "regulation of
myelination" evidence=IEA] [GO:0032331 "negative regulation of
chondrocyte differentiation" evidence=IEA] [GO:0035264
"multicellular organism growth" evidence=IEA] [GO:0060534 "trachea
cartilage development" evidence=IEA] [GO:0060740 "prostate gland
epithelium morphogenesis" evidence=IEA] [GO:0061037 "negative
regulation of cartilage development" evidence=IEA] [GO:0070384
"Harderian gland development" evidence=IEA] [GO:0071300 "cellular
response to retinoic acid" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005634 "nucleus" evidence=ISS;IDA]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] [GO:0032526 "response
to retinoic acid" evidence=IDA] [GO:0016021 "integral to membrane"
evidence=NAS] [GO:0048384 "retinoic acid receptor signaling
pathway" evidence=IDA] [GO:0060070 "canonical Wnt receptor
signaling pathway" evidence=TAS] [GO:0008361 "regulation of cell
size" evidence=TAS] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0003677 "DNA binding" evidence=ISS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0005667 "transcription factor complex"
evidence=ISS] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISS] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=ISS] [GO:0043065 "positive regulation of
apoptotic process" evidence=ISS] [GO:0043068 "positive regulation
of programmed cell death" evidence=ISS] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0046965 "retinoid X receptor binding"
evidence=ISS] [GO:0048048 "embryonic eye morphogenesis"
evidence=ISS] Reactome:REACT_71 InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0016021
GO:GO:0008285 GO:GO:0009952 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 EMBL:CH471054
GO:GO:0003700 GO:GO:0008361 Pathway_Interaction_DB:rxr_vdr_pathway
GO:GO:0005667 GO:GO:0000122 GO:GO:0043065 GO:GO:0032526
GO:GO:0035264 GO:GO:0035116
Pathway_Interaction_DB:retinoic_acid_pathway DrugBank:DB00755
GO:GO:0048384 GO:GO:0048048 DrugBank:DB00459 GO:GO:0060740
GO:GO:0006367 GO:GO:0060070 GO:GO:0046965 GO:GO:0032331
HOVERGEN:HBG005606 GO:GO:0003708 EMBL:AC021072 CTD:5916
GO:GO:0070384 GO:GO:0061037 DrugBank:DB00523 DrugBank:DB00926
eggNOG:NOG297448 OrthoDB:EOG4F7NK7 DrugBank:DB00210
DrugBank:DB00799 EMBL:M24857 EMBL:M57707 EMBL:M38258 EMBL:AK297023
EMBL:AK297277 EMBL:AK316259 EMBL:AC073573 EMBL:BC093727
EMBL:BC093729 EMBL:M32074 EMBL:X57280 EMBL:AJ250835 EMBL:AY013703
EMBL:AY013704 IPI:IPI00427809 IPI:IPI00465344 IPI:IPI00788710
PIR:A33903 PIR:C35991 RefSeq:NP_000957.1 RefSeq:NP_001036193.1
RefSeq:NP_001230659.1 RefSeq:NP_001230661.1 UniGene:Hs.1497
UniGene:Hs.733399 PDB:1EXA PDB:1EXX PDB:1FCX PDB:1FCY PDB:1FCZ
PDB:1FD0 PDB:2LBD PDB:3LBD PDB:4LBD PDBsum:1EXA PDBsum:1EXX
PDBsum:1FCX PDBsum:1FCY PDBsum:1FCZ PDBsum:1FD0 PDBsum:2LBD
PDBsum:3LBD PDBsum:4LBD ProteinModelPortal:P13631 SMR:P13631
IntAct:P13631 STRING:P13631 PhosphoSite:P13631 DMDM:133498
PaxDb:P13631 PRIDE:P13631 DNASU:5916 Ensembl:ENST00000327550
Ensembl:ENST00000338561 Ensembl:ENST00000394426
Ensembl:ENST00000425354 Ensembl:ENST00000543726 GeneID:5916
KEGG:hsa:5916 UCSC:uc001sce.3 GeneCards:GC12M053604
H-InvDB:HIX0129677 HGNC:HGNC:9866 MIM:180190 neXtProt:NX_P13631
PharmGKB:PA34227 InParanoid:P13631 KO:K08529 OMA:RSPQPDQ
PhylomeDB:P13631 BindingDB:P13631 ChEMBL:CHEMBL2003
EvolutionaryTrace:P13631 GenomeRNAi:5916 NextBio:23030
ArrayExpress:P13631 Bgee:P13631 CleanEx:HS_RARG
Genevestigator:P13631 GermOnline:ENSG00000172819 GO:GO:0003430
GO:GO:0060534 Uniprot:P13631
Length = 454
Score = 110 (43.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 35/115 (30%), Positives = 53/115 (46%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C CI++K RN+CQ CRL+KC +GM
Sbjct: 101 HYGVSSCEGCKGFFRRSI----QKNMVYTCHRDKN-CIINKVTRNRCQYCRLQKCFEVGM 155
Query: 65 NKDDAQHLKNSLL-----------YEFACTNLVELRCIVDKAHRNQCQA-CRLKK 107
+K+ ++ +N YE + L EL V KAH+ + C+L K
Sbjct: 156 SKEAVRNDRNKKKKEVKEEGSPDSYELS-PQLEELITKVSKAHQETFPSLCQLGK 209
Score = 97 (39.2 bits), Expect = 0.00037, P = 0.00037
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI++K RN+CQ CRL+KC +GM+K+
Sbjct: 132 CIINKVTRNRCQYCRLQKCFEVGMSKE 158
>MGI|MGI:97858 [details] [associations]
symbol:Rarg "retinoic acid receptor, gamma" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IDA] [GO:0002063 "chondrocyte
development" evidence=IMP] [GO:0003417 "growth plate cartilage
development" evidence=IGI] [GO:0003430 "growth plate cartilage
chondrocyte growth" evidence=IMP] [GO:0003677 "DNA binding"
evidence=IC;IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IDA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0003708 "retinoic acid
receptor activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0005667
"transcription factor complex" evidence=IDA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IGI] [GO:0009952
"anterior/posterior pattern specification" evidence=IGI;IMP]
[GO:0010468 "regulation of gene expression" evidence=IGI]
[GO:0010628 "positive regulation of gene expression" evidence=IDA]
[GO:0032331 "negative regulation of chondrocyte differentiation"
evidence=IMP] [GO:0032526 "response to retinoic acid" evidence=ISO]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IGI]
[GO:0035264 "multicellular organism growth" evidence=IGI]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IGI] [GO:0043068 "positive regulation of programmed cell
death" evidence=IGI] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0045596 "negative regulation of cell
differentiation" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IC;IGI;IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046965 "retinoid
X receptor binding" evidence=IMP] [GO:0048048 "embryonic eye
morphogenesis" evidence=IGI] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=ISO;IMP] [GO:0048608 "reproductive
structure development" evidence=IMP] [GO:0048732 "gland
development" evidence=IMP] [GO:0060173 "limb development"
evidence=IMP] [GO:0060348 "bone development" evidence=IMP]
[GO:0060349 "bone morphogenesis" evidence=IGI;IMP] [GO:0060429
"epithelium development" evidence=IMP] [GO:0060534 "trachea
cartilage development" evidence=IMP] [GO:0060740 "prostate gland
epithelium morphogenesis" evidence=IMP] [GO:0061037 "negative
regulation of cartilage development" evidence=IMP] [GO:0070384
"Harderian gland development" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:97858
GO:GO:0008285 GO:GO:0009952 GO:GO:0046872 GO:GO:0003677
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0005667 GO:GO:0000122 GO:GO:0043065 GO:GO:0032526
GO:GO:0035264 GO:GO:0035116 GO:GO:0048384 GO:GO:0048048
GO:GO:0060740 GO:GO:0046965 GO:GO:0032331 HOVERGEN:HBG005606
GO:GO:0003708 CTD:5916 GO:GO:0070384 GO:GO:0061037 eggNOG:NOG297448
GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312 OrthoDB:EOG4F7NK7
KO:K08529 OMA:RSPQPDQ GO:GO:0003430 GO:GO:0060534 EMBL:X15848
EMBL:M34475 EMBL:M34476 EMBL:AK148064 EMBL:BC012923 EMBL:BC013709
EMBL:M32068 EMBL:M32069 EMBL:M32070 IPI:IPI00122863 IPI:IPI00320178
IPI:IPI00885347 PIR:B34714 PIR:S05052 RefSeq:NP_001036192.1
RefSeq:NP_035374.3 UniGene:Mm.1273 ProteinModelPortal:P18911
SMR:P18911 DIP:DIP-42822N MINT:MINT-2834553 STRING:P18911
PhosphoSite:P18911 PRIDE:P18911 Ensembl:ENSMUST00000043172
Ensembl:ENSMUST00000063339 GeneID:19411 KEGG:mmu:19411
UCSC:uc007she.1 InParanoid:P18911 BindingDB:P18911
ChEMBL:CHEMBL4177 NextBio:296533 Bgee:P18911 CleanEx:MM_RARG
Genevestigator:P18911 GermOnline:ENSMUSG00000001288 Uniprot:P18911
Length = 458
Score = 110 (43.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 35/115 (30%), Positives = 53/115 (46%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C CI++K RN+CQ CRL+KC +GM
Sbjct: 101 HYGVSSCEGCKGFFRRSI----QKNMVYTCHRDKN-CIINKVTRNRCQYCRLQKCFEVGM 155
Query: 65 NKDDAQHLKNSLL-----------YEFACTNLVELRCIVDKAHRNQCQA-CRLKK 107
+K+ ++ +N YE + L EL V KAH+ + C+L K
Sbjct: 156 SKEAVRNDRNKKKKEVKEEGSPDSYELS-PQLEELITKVSKAHQETFPSLCQLGK 209
Score = 97 (39.2 bits), Expect = 0.00038, P = 0.00038
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI++K RN+CQ CRL+KC +GM+K+
Sbjct: 132 CIINKVTRNRCQYCRLQKCFEVGMSKE 158
>MGI|MGI:97856 [details] [associations]
symbol:Rara "retinoic acid receptor, alpha" species:10090 "Mus
musculus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IGI;IDA] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000900 "translation repressor
activity, nucleic acid binding" evidence=ISO] [GO:0001657 "ureteric
bud development" evidence=IMP] [GO:0001972 "retinoic acid binding"
evidence=ISO] [GO:0003417 "growth plate cartilage development"
evidence=IGI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO;IDA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=ISO;IDA] [GO:0003713 "transcription coactivator activity"
evidence=ISO] [GO:0003714 "transcription corepressor activity"
evidence=ISO] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IDA] [GO:0005102 "receptor binding" evidence=ISO]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005737 "cytoplasm" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IDA] [GO:0006468 "protein phosphorylation" evidence=ISO]
[GO:0007165 "signal transduction" evidence=ISO] [GO:0007281 "germ
cell development" evidence=IMP] [GO:0007283 "spermatogenesis"
evidence=IMP] [GO:0008134 "transcription factor binding"
evidence=ISO;IPI] [GO:0008144 "drug binding" evidence=ISO]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008284 "positive
regulation of cell proliferation" evidence=ISO;IGI] [GO:0008285
"negative regulation of cell proliferation" evidence=ISO]
[GO:0008584 "male gonad development" evidence=ISO] [GO:0010628
"positive regulation of gene expression" evidence=IMP] [GO:0010629
"negative regulation of gene expression" evidence=IGI] [GO:0017148
"negative regulation of translation" evidence=ISO] [GO:0019899
"enzyme binding" evidence=ISO] [GO:0019904 "protein domain specific
binding" evidence=ISO] [GO:0030425 "dendrite" evidence=ISO;IDA]
[GO:0030520 "intracellular estrogen receptor signaling pathway"
evidence=ISO] [GO:0030522 "intracellular receptor mediated
signaling pathway" evidence=IDA] [GO:0030852 "regulation of
granulocyte differentiation" evidence=IMP] [GO:0030853 "negative
regulation of granulocyte differentiation" evidence=ISO]
[GO:0031490 "chromatin DNA binding" evidence=ISO] [GO:0031641
"regulation of myelination" evidence=ISO] [GO:0032355 "response to
estradiol stimulus" evidence=ISO] [GO:0032526 "response to retinoic
acid" evidence=ISO;IMP] [GO:0032689 "negative regulation of
interferon-gamma production" evidence=ISO] [GO:0032720 "negative
regulation of tumor necrosis factor production" evidence=ISO]
[GO:0032736 "positive regulation of interleukin-13 production"
evidence=ISO] [GO:0032753 "positive regulation of interleukin-4
production" evidence=ISO] [GO:0032754 "positive regulation of
interleukin-5 production" evidence=ISO] [GO:0035264 "multicellular
organism growth" evidence=IGI] [GO:0042981 "regulation of apoptotic
process" evidence=ISO] [GO:0043005 "neuron projection"
evidence=ISO] [GO:0043025 "neuronal cell body" evidence=IDA]
[GO:0043277 "apoptotic cell clearance" evidence=ISO] [GO:0043401
"steroid hormone mediated signaling pathway" evidence=IEA]
[GO:0043422 "protein kinase B binding" evidence=ISO] [GO:0043565
"sequence-specific DNA binding" evidence=IGI;IDA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IMP]
[GO:0044323 "retinoic acid-responsive element binding"
evidence=ISO] [GO:0045471 "response to ethanol" evidence=ISO]
[GO:0045596 "negative regulation of cell differentiation"
evidence=IMP] [GO:0045630 "positive regulation of T-helper 2 cell
differentiation" evidence=ISO] [GO:0045666 "positive regulation of
neuron differentiation" evidence=ISO] [GO:0045787 "positive
regulation of cell cycle" evidence=ISO] [GO:0045892 "negative
regulation of transcription, DNA-dependent" evidence=ISO;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=ISO;IGI] [GO:0045947
"negative regulation of translational initiation" evidence=IDA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0046982 "protein
heterodimerization activity" evidence=ISO] [GO:0048027 "mRNA 5'-UTR
binding" evidence=ISO] [GO:0048167 "regulation of synaptic
plasticity" evidence=ISO] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=ISO;IDA] [GO:0048471 "perinuclear
region of cytoplasm" evidence=ISO] [GO:0051018 "protein kinase A
binding" evidence=ISO] [GO:0051099 "positive regulation of binding"
evidence=ISO] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IMP] [GO:0060010 "Sertoli cell fate
commitment" evidence=IMP] [GO:0060591 "chondroblast
differentiation" evidence=IMP] [GO:0061037 "negative regulation of
cartilage development" evidence=IMP] [GO:0071222 "cellular response
to lipopolysaccharide" evidence=IDA] [GO:0071300 "cellular response
to retinoic acid" evidence=ISO] [GO:0071391 "cellular response to
estrogen stimulus" evidence=ISO] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 MGI:MGI:97856
GO:GO:0005634 GO:GO:0005737 GO:GO:0003714 GO:GO:0045892
GO:GO:0032689 GO:GO:0032355 GO:GO:0046872 GO:GO:0045947
GO:GO:0008284 GO:GO:0043025 GO:GO:0030425 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944 GO:GO:0006468
GO:GO:0007283 GO:GO:0071222 GO:GO:0000122 GO:GO:0044212
GO:GO:0000790 GO:GO:0003713 GO:GO:0032526 GO:GO:0032720
GO:GO:0007281 GO:GO:0035264 GO:GO:0030853 GO:GO:0010628
GO:GO:0051099 GO:GO:0031490 GO:GO:0001657 GO:GO:0030520
GO:GO:0045787 GO:GO:0071391 GO:GO:0043277 GO:GO:0032753
GO:GO:0045630 GO:GO:0003417 HOVERGEN:HBG005606 GO:GO:0001972
GO:GO:0060591 GO:GO:0003708 GO:GO:0045596 GO:GO:0032736
GO:GO:0032754 GO:GO:0061037 GO:GO:0055012 GO:GO:0044323
eggNOG:NOG297448 GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312
KO:K08527 OMA:RTENVCI OrthoDB:EOG4F7NK7 CTD:5914 GO:GO:0060010
EMBL:X56572 EMBL:X56565 EMBL:S56656 EMBL:X57528 EMBL:M60909
EMBL:BC010216 IPI:IPI00114447 IPI:IPI00223075 PIR:S05050
RefSeq:NP_001169999.1 RefSeq:NP_001170773.1 RefSeq:NP_001170774.1
RefSeq:NP_033050.2 UniGene:Mm.439744 ProteinModelPortal:P11416
SMR:P11416 DIP:DIP-31480N IntAct:P11416 MINT:MINT-5210296
STRING:P11416 PhosphoSite:P11416 PRIDE:P11416
Ensembl:ENSMUST00000068133 Ensembl:ENSMUST00000107473
Ensembl:ENSMUST00000107474 Ensembl:ENSMUST00000107475
Ensembl:ENSMUST00000164748 GeneID:19401 KEGG:mmu:19401
UCSC:uc007lhz.2 InParanoid:P11416 BindingDB:P11416
ChEMBL:CHEMBL2792 NextBio:296513 Bgee:P11416 CleanEx:MM_RARA
Genevestigator:P11416 GermOnline:ENSMUSG00000037992 GO:GO:0030852
Uniprot:P11416
Length = 462
Score = 110 (43.8 bits), Expect = 1.5e-05, P = 1.5e-05
Identities = 23/70 (32%), Positives = 38/70 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C CI++K RN+CQ CRL+KC ++GM
Sbjct: 99 HYGVSACEGCKGFFRRSI----QKNMVYTCHRDKN-CIINKVTRNRCQYCRLQKCFDVGM 153
Query: 65 NKDDAQHLKN 74
+K+ ++ +N
Sbjct: 154 SKESVRNDRN 163
Score = 98 (39.6 bits), Expect = 0.00030, P = 0.00030
Identities = 15/27 (55%), Positives = 23/27 (85%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI++K RN+CQ CRL+KC ++GM+K+
Sbjct: 130 CIINKVTRNRCQYCRLQKCFDVGMSKE 156
>UNIPROTKB|D4A6Q3 [details] [associations]
symbol:Rara "Protein Rara" species:10116 "Rattus
norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3534 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708 IPI:IPI00949177
Ensembl:ENSRNOT00000065435 ArrayExpress:D4A6Q3 Uniprot:D4A6Q3
Length = 406
Score = 109 (43.4 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C CI++K RN+CQ CRL+KC +GM
Sbjct: 43 HYGVSACEGCKGFFRRSI----QKNMVYTCHRDKN-CIINKVTRNRCQYCRLQKCFEVGM 97
Query: 65 NKDDAQHLKN 74
+K+ ++ +N
Sbjct: 98 SKESVRNDRN 107
Score = 97 (39.2 bits), Expect = 0.00032, P = 0.00032
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI++K RN+CQ CRL+KC +GM+K+
Sbjct: 74 CIINKVTRNRCQYCRLQKCFEVGMSKE 100
>RGD|1583230 [details] [associations]
symbol:Rarg "retinoic acid receptor, gamma" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0002063 "chondrocyte development" evidence=ISO] [GO:0003417
"growth plate cartilage development" evidence=ISO] [GO:0003430
"growth plate cartilage chondrocyte growth" evidence=IEA;ISO]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IMP] [GO:0005634 "nucleus" evidence=ISO] [GO:0005667
"transcription factor complex" evidence=IEA;ISO] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0008285 "negative regulation of
cell proliferation" evidence=IEA;ISO] [GO:0009952
"anterior/posterior pattern specification" evidence=IEA;ISO]
[GO:0010468 "regulation of gene expression" evidence=ISO]
[GO:0010628 "positive regulation of gene expression" evidence=ISO]
[GO:0031641 "regulation of myelination" evidence=IDA] [GO:0032331
"negative regulation of chondrocyte differentiation"
evidence=IEA;ISO] [GO:0032526 "response to retinoic acid"
evidence=ISO] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA;ISO] [GO:0035264 "multicellular organism growth"
evidence=IEA;ISO] [GO:0043065 "positive regulation of apoptotic
process" evidence=IEA;ISO] [GO:0043068 "positive regulation of
programmed cell death" evidence=ISO] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0045596 "negative regulation of cell
differentiation" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA;ISO]
[GO:0046965 "retinoid X receptor binding" evidence=IEA;ISO]
[GO:0048048 "embryonic eye morphogenesis" evidence=IEA;ISO]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=ISO;IMP] [GO:0048608 "reproductive structure development"
evidence=ISO] [GO:0048732 "gland development" evidence=ISO]
[GO:0060173 "limb development" evidence=ISO] [GO:0060348 "bone
development" evidence=ISO] [GO:0060349 "bone morphogenesis"
evidence=ISO] [GO:0060429 "epithelium development" evidence=ISO]
[GO:0060534 "trachea cartilage development" evidence=IEA;ISO]
[GO:0060740 "prostate gland epithelium morphogenesis"
evidence=IEA;ISO] [GO:0061037 "negative regulation of cartilage
development" evidence=IEA;ISO] [GO:0070384 "Harderian gland
development" evidence=IEA;ISO] [GO:0071300 "cellular response to
retinoic acid" evidence=IEP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:1583230 GO:GO:0008285 GO:GO:0009952
GO:GO:0046872 GO:GO:0008284 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0071300 GO:GO:0045944 GO:GO:0005667 GO:GO:0000122
GO:GO:0043065 GO:GO:0035264 GO:GO:0035116 GO:GO:0048048
GO:GO:0060740 GO:GO:0032331 GO:GO:0031641 GO:GO:0003708 CTD:5916
GO:GO:0070384 GO:GO:0061037 GeneTree:ENSGT00680000099662 KO:K08529
GO:GO:0003430 GO:GO:0060534 IPI:IPI00914166 RefSeq:NP_001128722.1
UniGene:Rn.198797 Ensembl:ENSRNOT00000016801 GeneID:685072
KEGG:rno:685072 UCSC:RGD:1583230 ChEMBL:CHEMBL2630 NextBio:728895
ArrayExpress:D3ZWV0 Uniprot:D3ZWV0
Length = 485
Score = 110 (43.8 bits), Expect = 1.6e-05, P = 1.6e-05
Identities = 35/115 (30%), Positives = 53/115 (46%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C CI++K RN+CQ CRL+KC +GM
Sbjct: 128 HYGVSSCEGCKGFFRRSI----QKNMVYTCHRDKN-CIINKVTRNRCQYCRLQKCFEVGM 182
Query: 65 NKDDAQHLKNSLL-----------YEFACTNLVELRCIVDKAHRNQCQA-CRLKK 107
+K+ ++ +N YE + L EL V KAH+ + C+L K
Sbjct: 183 SKEAVRNDRNKKKKEVKEEGPPDNYELS-PQLEELITKVSKAHQETFPSLCQLGK 236
Score = 97 (39.2 bits), Expect = 0.00041, P = 0.00041
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI++K RN+CQ CRL+KC +GM+K+
Sbjct: 159 CIINKVTRNRCQYCRLQKCFEVGMSKE 185
>UNIPROTKB|F1NQH5 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0003417 "growth plate cartilage
development" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0021756 "striatum development" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IEA] [GO:0032331 "negative
regulation of chondrocyte differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0048566 "embryonic
digestive tract development" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0061037
"negative regulation of cartilage development" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0008285 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0000122
GO:GO:0043065 GO:GO:0032331 GO:GO:0003708 GO:GO:0061037
GeneTree:ENSGT00680000099662 EMBL:AADN02001127 EMBL:AADN02001120
EMBL:AADN02001121 EMBL:AADN02001122 EMBL:AADN02001123
EMBL:AADN02001124 EMBL:AADN02001125 EMBL:AADN02001126
IPI:IPI01017311 Ensembl:ENSGALT00000018429
Ensembl:ENSGALT00000037746 Uniprot:F1NQH5
Length = 359
Score = 108 (43.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C C+++K RN+CQ CRL+KC +GM
Sbjct: 39 HYGVSACEGCKGFFRRSI----QKNMVYTCHRDKN-CVINKVTRNRCQYCRLQKCFEVGM 93
Query: 65 NKDDAQHLKN 74
+K+ ++ +N
Sbjct: 94 SKESVRNDRN 103
Score = 96 (38.9 bits), Expect = 0.00034, P = 0.00034
Identities = 14/27 (51%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C+++K RN+CQ CRL+KC +GM+K+
Sbjct: 70 CVINKVTRNRCQYCRLQKCFEVGMSKE 96
>ZFIN|ZDB-GENE-030116-1 [details] [associations]
symbol:esr2b "estrogen receptor 2b" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0046872 "metal ion binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527
PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-030116-1 GO:GO:0005634
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00700000104072
HOVERGEN:HBG108344 HOGENOM:HOG000233468 InterPro:IPR021064
Pfam:PF12497 EMBL:CT025749 IPI:IPI00920188 UniGene:Dr.82564
Ensembl:ENSDART00000041300 OMA:CVEGIME OrthoDB:EOG4CJVH6
Uniprot:B8JJL4
Length = 600
Score = 111 (44.1 bits), Expect = 1.7e-05, P = 1.7e-05
Identities = 25/62 (40%), Positives = 35/62 (56%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK+ R CQACRL+KC +GM
Sbjct: 176 HYGVWSCEGCKAFFKRSI--QGHNDYI--CPA-TNQCTIDKSRRKSCQACRLRKCYEVGM 230
Query: 65 NK 66
K
Sbjct: 231 MK 232
Score = 99 (39.9 bits), Expect = 0.00033, P = 0.00033
Identities = 16/32 (50%), Positives = 22/32 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDGKSM 120
+C +DK+ R CQACRL+KC +GM K G +
Sbjct: 206 QCTIDKSRRKSCQACRLRKCYEVGMMKCGMQL 237
>UNIPROTKB|E1BYS2 [details] [associations]
symbol:NR4A3 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0001077 "RNA polymerase II core promoter proximal region
sequence-specific DNA binding transcription factor activity
involved in positive regulation of transcription" evidence=IEA]
[GO:0001707 "mesoderm formation" evidence=IEA] [GO:0005667
"transcription factor complex" evidence=IEA] [GO:0007411 "axon
guidance" evidence=IEA] [GO:0021766 "hippocampus development"
evidence=IEA] [GO:0030534 "adult behavior" evidence=IEA]
[GO:0033554 "cellular response to stress" evidence=IEA] [GO:0043524
"negative regulation of neuron apoptotic process" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0045787 "positive regulation of cell cycle" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0050885 "neuromuscular process controlling balance"
evidence=IEA] [GO:0060005 "vestibular reflex" evidence=IEA]
[GO:2000108 "positive regulation of leukocyte apoptotic process"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003070 InterPro:IPR003072
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01284 PRINTS:PR01286
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0033554 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0043524 GO:GO:0005667 GO:GO:0001077
GO:GO:0030522 GO:GO:0045787 GeneTree:ENSGT00640000091364 CTD:8013
KO:K08559 OMA:PSTSMYF GO:GO:2000108 GO:GO:0060005 EMBL:AC140790
IPI:IPI00599268 RefSeq:XP_419081.3 UniGene:Gga.33742
Ensembl:ENSGALT00000022087 GeneID:420996 KEGG:gga:420996
Uniprot:E1BYS2
Length = 609
Score = 111 (44.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 32/88 (36%), Positives = 45/88 (51%)
Query: 32 QACQAGTGRCIV--DKAHRNQCQACRLKKCLNM-GMNKDDAQHLKNSLLYEFACTNLVEL 88
++ +G G C V D A CQ ++ C G K Q KN+ ++ C L
Sbjct: 261 RSSSSGEGTCAVCGDNA---ACQHYGVRTCEGCKGFFKRTVQ--KNA---KYVC--LANK 310
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
C VDK RN+CQ CR +KCL++GM K+
Sbjct: 311 NCPVDKRRRNRCQYCRFQKCLSVGMVKE 338
>ZFIN|ZDB-GENE-030903-3 [details] [associations]
symbol:nr1i2 "nuclear receptor subfamily 1, group I,
member 2" species:7955 "Danio rerio" [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA;IDA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IDA] [GO:0001071 "nucleic
acid binding transcription factor activity" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA;IDA]
[GO:0046872 "metal ion binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-030903-3 GO:GO:0005634 GO:GO:0046872
GO:GO:0004879 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GeneTree:ENSGT00680000099585 EMBL:CR848676 IPI:IPI00935074
Ensembl:ENSDART00000017326 Bgee:F1R424 Uniprot:F1R424
Length = 430
Score = 109 (43.4 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 17/43 (39%), Positives = 29/43 (67%)
Query: 25 KAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD 67
+A + Q C C++ K++R QCQ+CRL+KCL++GM ++
Sbjct: 72 RAMKRPAQLCCPFQSACVITKSNRRQCQSCRLQKCLSIGMKRE 114
Score = 100 (40.3 bits), Expect = 0.00016, P = 0.00016
Identities = 14/27 (51%), Positives = 24/27 (88%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C++ K++R QCQ+CRL+KCL++GM ++
Sbjct: 88 CVITKSNRRQCQSCRLQKCLSIGMKRE 114
>UNIPROTKB|F1NWE8 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00680000099662 EMBL:AADN02001127 EMBL:AADN02001120
EMBL:AADN02001121 EMBL:AADN02001122 EMBL:AADN02001123
EMBL:AADN02001124 EMBL:AADN02001125 EMBL:AADN02001126
IPI:IPI00681960 ProteinModelPortal:F1NWE8
Ensembl:ENSGALT00000018430 ArrayExpress:F1NWE8 Uniprot:F1NWE8
Length = 368
Score = 108 (43.1 bits), Expect = 1.8e-05, P = 1.8e-05
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C C+++K RN+CQ CRL+KC +GM
Sbjct: 40 HYGVSACEGCKGFFRRSI----QKNMVYTCHRDKN-CVINKVTRNRCQYCRLQKCFEVGM 94
Query: 65 NKDDAQHLKN 74
+K+ ++ +N
Sbjct: 95 SKESVRNDRN 104
Score = 96 (38.9 bits), Expect = 0.00035, P = 0.00035
Identities = 14/27 (51%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C+++K RN+CQ CRL+KC +GM+K+
Sbjct: 71 CVINKVTRNRCQYCRLQKCFEVGMSKE 97
>UNIPROTKB|B0QYW7 [details] [associations]
symbol:ESR1 "Estrogen receptor" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PROSITE:PS51030 SMART:SM00399
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 EMBL:AL356311 EMBL:AL049821
EMBL:AL078582 EMBL:AL590993 IPI:IPI00218352 UniGene:Hs.208124
HGNC:HGNC:3467 ChiTaRS:ESR1 EMBL:AL035695 SMR:B0QYW7 STRING:B0QYW7
Ensembl:ENST00000415488 Uniprot:B0QYW7
Length = 107
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 34 CQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNK 66
C A T +C +DK R CQACRL+KC +GM K
Sbjct: 6 CPA-TNQCTIDKNRRKSCQACRLRKCYEVGMMK 37
Score = 97 (39.2 bits), Expect = 3.9e-05, P = 3.9e-05
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 11 QCTIDKNRRKSCQACRLRKCYEVGMMKGG 39
>UNIPROTKB|H7BZ00 [details] [associations]
symbol:NR4A2 "Nuclear receptor subfamily 4 group A member
2" species:9606 "Homo sapiens" [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001628 InterPro:IPR003070 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00105 PRINTS:PR01284 PROSITE:PS51030
SMART:SM00399 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 GO:GO:0030522 EMBL:AC074099 HGNC:HGNC:7981
ChiTaRS:NR4A2 ProteinModelPortal:H7BZ00 Ensembl:ENST00000406048
Uniprot:H7BZ00
Length = 150
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 16 AGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD 67
+G + I +N C A C VDK RN+CQ CR +KCL +GM K+
Sbjct: 63 SGQQSSIKRTVQKNAKYVCLANKN-CPVDKRRRNRCQYCRFQKCLAVGMVKE 113
Score = 95 (38.5 bits), Expect = 6.3e-05, P = 6.3e-05
Identities = 18/38 (47%), Positives = 24/38 (63%)
Query: 79 EFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
++ C L C VDK RN+CQ CR +KCL +GM K+
Sbjct: 78 KYVC--LANKNCPVDKRRRNRCQYCRFQKCLAVGMVKE 113
>UNIPROTKB|F1P4S0 [details] [associations]
symbol:NR3C1 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00398 PROSITE:PS51030
SMART:SM00399 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00700000104072
EMBL:AADN02028219 IPI:IPI01017230 ProteinModelPortal:F1P4S0
Ensembl:ENSGALT00000039823 Uniprot:F1P4S0
Length = 157
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 19/41 (46%), Positives = 24/41 (58%)
Query: 36 AGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSL 76
AG CI+DK R C ACR +KCL GMN + A+ K +
Sbjct: 10 AGRNDCIIDKIRRKNCPACRYRKCLQAGMNLE-ARKTKKKI 49
Score = 94 (38.1 bits), Expect = 8.1e-05, P = 8.1e-05
Identities = 15/29 (51%), Positives = 19/29 (65%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKDGK 118
CI+DK R C ACR +KCL GMN + +
Sbjct: 15 CIIDKIRRKNCPACRYRKCLQAGMNLEAR 43
>UNIPROTKB|K7GNJ0 [details] [associations]
symbol:ESR1 "Estrogen receptor" species:9823 "Sus scrofa"
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR001628
InterPro:IPR013088 Pfam:PF00105 PROSITE:PS51030 SMART:SM00399
Gene3D:3.30.50.10 GeneTree:ENSGT00700000104072 EMBL:CU694923
EMBL:FP091232 EMBL:FP102879 Ensembl:ENSSSCT00000035668
Uniprot:K7GNJ0
Length = 39
Score = 100 (40.3 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 18/33 (54%), Positives = 22/33 (66%)
Query: 34 CQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNK 66
C A T +C +DK R CQACRL+KC +GM K
Sbjct: 7 CPA-TNQCTIDKNRRKSCQACRLRKCYEVGMMK 38
Score = 92 (37.4 bits), Expect = 0.00013, P = 0.00013
Identities = 15/27 (55%), Positives = 19/27 (70%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNK 115
+C +DK R CQACRL+KC +GM K
Sbjct: 12 QCTIDKNRRKSCQACRLRKCYEVGMMK 38
>UNIPROTKB|H0Y4W6 [details] [associations]
symbol:ESR1 "Estrogen receptor" species:9606 "Homo sapiens"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0030284 "estrogen
receptor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001292 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 Pfam:PF02159 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005634 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0003700 GO:GO:0006351 GO:GO:0030284
EMBL:AL356311 EMBL:AL049821 EMBL:AL078582 EMBL:AL590993
HGNC:HGNC:3467 ChiTaRS:ESR1 EMBL:AL035695 ProteinModelPortal:H0Y4W6
Ensembl:ENST00000427531 OMA:VDYVCPA Uniprot:H0Y4W6
Length = 388
Score = 108 (43.1 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 101 HYGVWSCEGCKAFFKRSI--QGHNDYM--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 155
Query: 65 NK 66
K
Sbjct: 156 MK 157
Score = 97 (39.2 bits), Expect = 0.00030, P = 0.00030
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 131 QCTIDKNRRKSCQACRLRKCYEVGMMKGG 159
>UNIPROTKB|F6XWQ1 [details] [associations]
symbol:NR3C2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GeneTree:ENSGT00700000104072 CTD:4306 KO:K08555
OMA:FGSFPVH EMBL:AAEX03010024 RefSeq:XP_003639585.1
Ensembl:ENSCAFT00000012489 GeneID:475461 KEGG:cfa:475461
Uniprot:F6XWQ1
Length = 973
Score = 113 (44.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ +C+ +R V+ H C AG CI+DK R C ACRL+KCL GM
Sbjct: 611 HYGVVTCGSCKVFFKRA-VEGQHNYLC----AGRNDCIIDKIRRKNCPACRLQKCLQAGM 665
Query: 65 N 65
N
Sbjct: 666 N 666
>UNIPROTKB|P51126 [details] [associations]
symbol:rara "Retinoic acid receptor alpha" species:8355
"Xenopus laevis" [GO:0006351 "transcription, DNA-dependent"
evidence=IMP] [GO:0021955 "central nervous system neuron
axonogenesis" evidence=IMP] [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=IMP] [GO:0050769 "positive regulation
of neurogenesis" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0006351
GO:GO:0050769 GO:GO:0048384 GO:GO:0021955 HOVERGEN:HBG005606
GO:GO:0003708 EMBL:L11445 PIR:A41977 ProteinModelPortal:P51126
SMR:P51126 Xenbase:XB-GENE-865415 Uniprot:P51126
Length = 458
Score = 109 (43.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C CI++K RN+CQ CRL+KC +GM
Sbjct: 99 HYGVSACEGCKGFFRRSI----QKNMVYTCHRDKN-CIINKVTRNRCQYCRLQKCFEVGM 153
Query: 65 NKDDAQHLKN 74
+K+ ++ +N
Sbjct: 154 SKESVRNDRN 163
Score = 97 (39.2 bits), Expect = 0.00038, P = 0.00038
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI++K RN+CQ CRL+KC +GM+K+
Sbjct: 130 CIINKVTRNRCQYCRLQKCFEVGMSKE 156
>UNIPROTKB|Q499N1 [details] [associations]
symbol:Rara "Protein Rara" species:10116 "Rattus
norvegicus" [GO:0000122 "negative regulation of transcription from
RNA polymerase II promoter" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001657 "ureteric bud development"
evidence=IEA] [GO:0001972 "retinoic acid binding" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0003708 "retinoic acid receptor activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0005102 "receptor binding" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006468 "protein phosphorylation" evidence=IEA] [GO:0007281
"germ cell development" evidence=IEA] [GO:0007283 "spermatogenesis"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008284 "positive regulation of cell proliferation"
evidence=IEA] [GO:0014068 "positive regulation of
phosphatidylinositol 3-kinase cascade" evidence=IMP] [GO:0019904
"protein domain specific binding" evidence=IEA] [GO:0030425
"dendrite" evidence=IEA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=IEA] [GO:0030853 "negative
regulation of granulocyte differentiation" evidence=IEA]
[GO:0031490 "chromatin DNA binding" evidence=IEA] [GO:0032355
"response to estradiol stimulus" evidence=IEA] [GO:0032689
"negative regulation of interferon-gamma production" evidence=IEA]
[GO:0032720 "negative regulation of tumor necrosis factor
production" evidence=IEA] [GO:0032736 "positive regulation of
interleukin-13 production" evidence=IEA] [GO:0032753 "positive
regulation of interleukin-4 production" evidence=IEA] [GO:0032754
"positive regulation of interleukin-5 production" evidence=IEA]
[GO:0035014 "phosphatidylinositol 3-kinase regulator activity"
evidence=IMP] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0043277 "apoptotic cell clearance" evidence=IEA] [GO:0043422
"protein kinase B binding" evidence=IEA] [GO:0043551 "regulation of
phosphatidylinositol 3-kinase activity" evidence=IMP] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IEA] [GO:0045630
"positive regulation of T-helper 2 cell differentiation"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0045947
"negative regulation of translational initiation" evidence=IEA]
[GO:0046982 "protein heterodimerization activity" evidence=IEA]
[GO:0051018 "protein kinase A binding" evidence=IEA] [GO:0051099
"positive regulation of binding" evidence=IEA] [GO:0051897
"positive regulation of protein kinase B signaling cascade"
evidence=IMP] [GO:0055012 "ventricular cardiac muscle cell
differentiation" evidence=IEA] [GO:0060010 "Sertoli cell fate
commitment" evidence=IEA] [GO:0060591 "chondroblast
differentiation" evidence=IEA] [GO:0061037 "negative regulation of
cartilage development" evidence=IEA] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=IMP] [GO:0071222
"cellular response to lipopolysaccharide" evidence=IEA] [GO:0071300
"cellular response to retinoic acid" evidence=IEA] [GO:0071391
"cellular response to estrogen stimulus" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR003078 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 RGD:3534 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0070374 GO:GO:0014068 GO:GO:0051897
EMBL:CH473948 HOVERGEN:HBG005606 GO:GO:0035014 GO:GO:0003708
eggNOG:NOG297448 GeneTree:ENSGT00680000099662 HOGENOM:HOG000010312
KO:K08527 CTD:5914 UniGene:Rn.91057 EMBL:BC099830 IPI:IPI00212283
RefSeq:NP_113716.2 SMR:Q499N1 STRING:Q499N1
Ensembl:ENSRNOT00000008659 GeneID:24705 KEGG:rno:24705
ChEMBL:CHEMBL2269 NextBio:604175 Genevestigator:Q499N1
Uniprot:Q499N1
Length = 459
Score = 109 (43.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C CI++K RN+CQ CRL+KC +GM
Sbjct: 96 HYGVSACEGCKGFFRRSI----QKNMVYTCHRDKN-CIINKVTRNRCQYCRLQKCFEVGM 150
Query: 65 NKDDAQHLKN 74
+K+ ++ +N
Sbjct: 151 SKESVRNDRN 160
Score = 97 (39.2 bits), Expect = 0.00038, P = 0.00038
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI++K RN+CQ CRL+KC +GM+K+
Sbjct: 127 CIINKVTRNRCQYCRLQKCFEVGMSKE 153
>RGD|3094 [details] [associations]
symbol:Nr3c2 "nuclear receptor subfamily 3, group C, member 2"
species:10116 "Rattus norvegicus" [GO:0003690 "double-stranded DNA
binding" evidence=IDA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA;IMP] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA;IMP] [GO:0005496 "steroid
binding" evidence=ISO;IDA;IMP] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005789
"endoplasmic reticulum membrane" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006883 "cellular
sodium ion homeostasis" evidence=ISO] [GO:0007588 "excretion"
evidence=ISO] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0017082 "mineralocorticoid receptor activity" evidence=IDA]
[GO:0031959 "mineralocorticoid receptor signaling pathway"
evidence=IMP] [GO:0042127 "regulation of cell proliferation"
evidence=IDA] [GO:0042562 "hormone binding" evidence=IDA] [GO:0042803
"protein homodimerization activity" evidence=IDA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA;IDA] [GO:0046982
"protein heterodimerization activity" evidence=IDA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:3094
GO:GO:0005634 GO:GO:0005737 GO:GO:0042803 GO:GO:0005789 GO:GO:0005496
GO:GO:0046872 GO:GO:0043565 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0042562 GO:GO:0007588
GO:GO:0042127 GO:GO:0003690 GO:GO:0046982 GO:GO:0006883
eggNOG:NOG294115 OrthoDB:EOG4BRWK3 CTD:4306 HOGENOM:HOG000247011
HOVERGEN:HBG006336 KO:K08555 GO:GO:0017082 EMBL:M36074 EMBL:S79920
EMBL:S75686 IPI:IPI00230991 IPI:IPI00285687 IPI:IPI00324498
PIR:A41401 RefSeq:NP_037263.1 UniGene:Rn.9678
ProteinModelPortal:P22199 SMR:P22199 STRING:P22199 PhosphoSite:P22199
PRIDE:P22199 GeneID:25672 KEGG:rno:25672 UCSC:RGD:3094
BindingDB:P22199 ChEMBL:CHEMBL3507 NextBio:607611 ArrayExpress:P22199
Genevestigator:P22199 GermOnline:ENSRNOG00000034007 Uniprot:P22199
Length = 981
Score = 113 (44.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ +C+ +R V+ H C AG CI+DK R C ACRL+KCL GM
Sbjct: 615 HYGVVTCGSCKVFFKRA-VEGQHNYLC----AGRNDCIIDKIRRKNCPACRLQKCLQAGM 669
Query: 65 N 65
N
Sbjct: 670 N 670
>UNIPROTKB|P22199 [details] [associations]
symbol:Nr3c2 "Mineralocorticoid receptor" species:10116
"Rattus norvegicus" [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
RGD:3094 GO:GO:0005634 GO:GO:0005737 GO:GO:0042803 GO:GO:0005789
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0042562
GO:GO:0007588 GO:GO:0042127 GO:GO:0003690 GO:GO:0046982
GO:GO:0006883 eggNOG:NOG294115 OrthoDB:EOG4BRWK3 CTD:4306
HOGENOM:HOG000247011 HOVERGEN:HBG006336 KO:K08555 GO:GO:0017082
EMBL:M36074 EMBL:S79920 EMBL:S75686 IPI:IPI00230991 IPI:IPI00285687
IPI:IPI00324498 PIR:A41401 RefSeq:NP_037263.1 UniGene:Rn.9678
ProteinModelPortal:P22199 SMR:P22199 STRING:P22199
PhosphoSite:P22199 PRIDE:P22199 GeneID:25672 KEGG:rno:25672
UCSC:RGD:3094 BindingDB:P22199 ChEMBL:CHEMBL3507 NextBio:607611
ArrayExpress:P22199 Genevestigator:P22199
GermOnline:ENSRNOG00000034007 Uniprot:P22199
Length = 981
Score = 113 (44.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ +C+ +R V+ H C AG CI+DK R C ACRL+KCL GM
Sbjct: 615 HYGVVTCGSCKVFFKRA-VEGQHNYLC----AGRNDCIIDKIRRKNCPACRLQKCLQAGM 669
Query: 65 N 65
N
Sbjct: 670 N 670
>UNIPROTKB|Q90966 [details] [associations]
symbol:RARA "Retinoic acid receptor alpha" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0032526 "response to
retinoic acid" evidence=IDA] [GO:0021575 "hindbrain morphogenesis"
evidence=IDA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0032526 GO:GO:0021575
HOVERGEN:HBG005606 GO:GO:0003708 eggNOG:NOG297448 KO:K08527
CTD:5914 EMBL:X73972 EMBL:X78335 IPI:IPI00603905 IPI:IPI00604270
PIR:I50674 RefSeq:NP_989867.1 UniGene:Gga.112
ProteinModelPortal:Q90966 SMR:Q90966 STRING:Q90966 GeneID:395213
KEGG:gga:395213 NextBio:20815302 Uniprot:Q90966
Length = 460
Score = 109 (43.4 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C CI++K RN+CQ CRL+KC +GM
Sbjct: 99 HYGVSACEGCKGFFRRSI----QKNMVYTCHRDKN-CIINKVTRNRCQYCRLQKCFEVGM 153
Query: 65 NKDDAQHLKN 74
+K+ ++ +N
Sbjct: 154 SKESVRNDRN 163
Score = 97 (39.2 bits), Expect = 0.00038, P = 0.00038
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI++K RN+CQ CRL+KC +GM+K+
Sbjct: 130 CIINKVTRNRCQYCRLQKCFEVGMSKE 156
>UNIPROTKB|F1MKV9 [details] [associations]
symbol:NR3C2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0007588 "excretion" evidence=IEA] [GO:0006883 "cellular
sodium ion homeostasis" evidence=IEA] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0007588 GO:GO:0003700 GO:GO:0006351 GO:GO:0006883
GeneTree:ENSGT00700000104072 CTD:4306 KO:K08555 OMA:FGSFPVH
EMBL:DAAA02044266 EMBL:DAAA02044267 EMBL:DAAA02044268
IPI:IPI00724999 RefSeq:NP_001178278.1 UniGene:Bt.105964
Ensembl:ENSBTAT00000003291 GeneID:537614 KEGG:bta:537614
NextBio:20877167 Uniprot:F1MKV9
Length = 984
Score = 113 (44.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ +C+ +R V+ H C AG CI+DK R C ACRL+KCL GM
Sbjct: 616 HYGVVTCGSCKVFFKRA-VEGQHNYLC----AGRNDCIIDKIRRKNCPACRLQKCLQAGM 670
Query: 65 N 65
N
Sbjct: 671 N 671
>UNIPROTKB|B0ZBF6 [details] [associations]
symbol:NR3C2 "Mineralocorticoid receptor" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0006883 "cellular sodium ion
homeostasis" evidence=IEA] [GO:0007588 "excretion" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0005737 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0042562 GO:GO:0007588 GO:GO:0042127
GO:GO:0003690 GO:GO:0006883 OrthoDB:EOG4BRWK3 EMBL:EU326312
EMBL:FJ515829 EMBL:AC069272 EMBL:AC093678 EMBL:AC093881
EMBL:AC104691 IPI:IPI00027744 RefSeq:NP_000892.2 UniGene:Hs.163924
GeneID:4306 KEGG:hsa:4306 CTD:4306 HGNC:HGNC:7979 PharmGKB:PA242
HOGENOM:HOG000247011 HOVERGEN:HBG006336 KO:K08555 GenomeRNAi:4306
NextBio:16949 GO:GO:0017082 EMBL:AC106889 SMR:B0ZBF6 STRING:B0ZBF6
Ensembl:ENST00000344721 UCSC:uc003ilj.4 Uniprot:B0ZBF6
Length = 984
Score = 113 (44.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ +C+ +R V+ H C AG CI+DK R C ACRL+KCL GM
Sbjct: 614 HYGVVTCGSCKVFFKRA-VEGQHNYLC----AGRNDCIIDKIRRKNCPACRLQKCLQAGM 668
Query: 65 N 65
N
Sbjct: 669 N 669
>UNIPROTKB|P08235 [details] [associations]
symbol:NR3C2 "Mineralocorticoid receptor" species:9606
"Homo sapiens" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0006883 "cellular sodium ion homeostasis" evidence=IEA]
[GO:0007588 "excretion" evidence=IEA] [GO:0005789 "endoplasmic
reticulum membrane" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007165 "signal transduction" evidence=TAS]
[GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006367 "transcription
initiation from RNA polymerase II promoter" evidence=TAS]
[GO:0010467 "gene expression" evidence=TAS] Reactome:REACT_71
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005654 GO:GO:0005789 GO:GO:0005496 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700 DrugBank:DB00421
GO:GO:0006367 DrugBank:DB00700 eggNOG:NOG294115 EMBL:M16801
EMBL:AJ315514 EMBL:AJ315515 EMBL:EU326312 EMBL:FJ515829
EMBL:AC069272 EMBL:AC093678 EMBL:AC093881 EMBL:AC104691
EMBL:AC106899 EMBL:BC111758 EMBL:AH006913 IPI:IPI00027744
IPI:IPI00248972 IPI:IPI00248973 IPI:IPI00248974 IPI:IPI00889774
PIR:A29513 RefSeq:NP_000892.2 UniGene:Hs.163924 PDB:1Y9R PDB:1YA3
PDB:2A3I PDB:2AA2 PDB:2AA5 PDB:2AA6 PDB:2AA7 PDB:2AAX PDB:2AB2
PDB:2ABI PDB:2OAX PDB:3VHU PDB:3VHV PDBsum:1Y9R PDBsum:1YA3
PDBsum:2A3I PDBsum:2AA2 PDBsum:2AA5 PDBsum:2AA6 PDBsum:2AA7
PDBsum:2AAX PDBsum:2AB2 PDBsum:2ABI PDBsum:2OAX PDBsum:3VHU
PDBsum:3VHV ProteinModelPortal:P08235 SMR:P08235 IntAct:P08235
STRING:P08235 PhosphoSite:P08235 DMDM:126885 PRIDE:P08235
Ensembl:ENST00000358102 Ensembl:ENST00000512865 GeneID:4306
KEGG:hsa:4306 CTD:4306 GeneCards:GC04M148999 H-InvDB:HIX0024570
HGNC:HGNC:7979 HPA:CAB009155 MIM:177735 MIM:600983 MIM:605115
neXtProt:NX_P08235 Orphanet:88660 Orphanet:171871 PharmGKB:PA242
HOGENOM:HOG000247011 HOVERGEN:HBG006336 KO:K08555 BindingDB:P08235
ChEMBL:CHEMBL1994 DrugBank:DB01134 DrugBank:DB00687
EvolutionaryTrace:P08235 GenomeRNAi:4306 NextBio:16949
ArrayExpress:P08235 Bgee:P08235 CleanEx:HS_NR3C2
Genevestigator:P08235 GermOnline:ENSG00000151623 Uniprot:P08235
Length = 984
Score = 113 (44.8 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 25/61 (40%), Positives = 32/61 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ +C+ +R V+ H C AG CI+DK R C ACRL+KCL GM
Sbjct: 614 HYGVVTCGSCKVFFKRA-VEGQHNYLC----AGRNDCIIDKIRRKNCPACRLQKCLQAGM 668
Query: 65 N 65
N
Sbjct: 669 N 669
>UNIPROTKB|F1MWQ3 [details] [associations]
symbol:RARA "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071391 "cellular response to estrogen stimulus"
evidence=IEA] [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0071222 "cellular response to lipopolysaccharide"
evidence=IEA] [GO:0061037 "negative regulation of cartilage
development" evidence=IEA] [GO:0060591 "chondroblast
differentiation" evidence=IEA] [GO:0060010 "Sertoli cell fate
commitment" evidence=IEA] [GO:0055012 "ventricular cardiac muscle
cell differentiation" evidence=IEA] [GO:0051099 "positive
regulation of binding" evidence=IEA] [GO:0051018 "protein kinase A
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045947 "negative regulation of
translational initiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0045630 "positive regulation of T-helper 2 cell
differentiation" evidence=IEA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IEA] [GO:0043422 "protein
kinase B binding" evidence=IEA] [GO:0043277 "apoptotic cell
clearance" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0032754 "positive regulation of interleukin-5
production" evidence=IEA] [GO:0032753 "positive regulation of
interleukin-4 production" evidence=IEA] [GO:0032736 "positive
regulation of interleukin-13 production" evidence=IEA] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032689 "negative regulation of interferon-gamma
production" evidence=IEA] [GO:0032355 "response to estradiol
stimulus" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0030853 "negative regulation of granulocyte
differentiation" evidence=IEA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0001972 "retinoic acid binding" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005737
GO:GO:0003714 GO:GO:0032689 GO:GO:0032355 GO:GO:0046872
GO:GO:0045947 GO:GO:0008284 GO:GO:0043025 GO:GO:0030425
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0006468 GO:GO:0007283 GO:GO:0071222 GO:GO:0000122
GO:GO:0000790 GO:GO:0003713 GO:GO:0032720 GO:GO:0007281
GO:GO:0035264 GO:GO:0030853 GO:GO:0051099 GO:GO:0031490
GO:GO:0001657 GO:GO:0030520 GO:GO:0045787 GO:GO:0071391
GO:GO:0043277 GO:GO:0032753 GO:GO:0045630 GO:GO:0003417
GO:GO:0001972 GO:GO:0060591 GO:GO:0003708 GO:GO:0032736
GO:GO:0032754 GO:GO:0061037 GO:GO:0055012 GO:GO:0044323
GeneTree:ENSGT00680000099662 KO:K08527 OMA:RTENVCI CTD:5914
GO:GO:0060010 EMBL:DAAA02049130 EMBL:DAAA02049137 EMBL:DAAA02049131
EMBL:DAAA02049132 EMBL:DAAA02049133 EMBL:DAAA02049134
EMBL:DAAA02049135 EMBL:DAAA02049136 IPI:IPI00709635
RefSeq:NP_001014942.2 UniGene:Bt.8306 Ensembl:ENSBTAT00000016586
GeneID:534280 KEGG:bta:534280 NextBio:20876336 Uniprot:F1MWQ3
Length = 462
Score = 109 (43.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C CI++K RN+CQ CRL+KC +GM
Sbjct: 99 HYGVSACEGCKGFFRRSI----QKNMVYTCHRDKN-CIINKVTRNRCQYCRLQKCFEVGM 153
Query: 65 NKDDAQHLKN 74
+K+ ++ +N
Sbjct: 154 SKESVRNDRN 163
Score = 97 (39.2 bits), Expect = 0.00038, P = 0.00038
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI++K RN+CQ CRL+KC +GM+K+
Sbjct: 130 CIINKVTRNRCQYCRLQKCFEVGMSKE 156
>UNIPROTKB|F1PN49 [details] [associations]
symbol:RARA "Retinoic acid receptor alpha" species:9615
"Canis lupus familiaris" [GO:0005634 "nucleus" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00680000099662 EMBL:AAEX03006463 EMBL:AAEX03006464
EMBL:AAEX03006465 ProteinModelPortal:F1PN49
Ensembl:ENSCAFT00000011311 Uniprot:F1PN49
Length = 462
Score = 109 (43.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C CI++K RN+CQ CRL+KC +GM
Sbjct: 99 HYGVSACEGCKGFFRRSI----QKNMVYTCHRDKN-CIINKVTRNRCQYCRLQKCFEVGM 153
Query: 65 NKDDAQHLKN 74
+K+ ++ +N
Sbjct: 154 SKESVRNDRN 163
Score = 97 (39.2 bits), Expect = 0.00038, P = 0.00038
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI++K RN+CQ CRL+KC +GM+K+
Sbjct: 130 CIINKVTRNRCQYCRLQKCFEVGMSKE 156
>UNIPROTKB|Q5FBR4 [details] [associations]
symbol:RARA "Retinoic acid receptor alpha" species:9615
"Canis lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0005737
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
HOVERGEN:HBG005606 GO:GO:0003708 eggNOG:NOG297448
HOGENOM:HOG000010312 KO:K08527 EMBL:AB179779 RefSeq:NP_001012663.1
UniGene:Cfa.45823 ProteinModelPortal:Q5FBR4 SMR:Q5FBR4
STRING:Q5FBR4 GeneID:480526 KEGG:cfa:480526 CTD:5914
NextBio:20855534 Uniprot:Q5FBR4
Length = 462
Score = 109 (43.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C CI++K RN+CQ CRL+KC +GM
Sbjct: 99 HYGVSACEGCKGFFRRSI----QKNMVYTCHRDKN-CIINKVTRNRCQYCRLQKCFEVGM 153
Query: 65 NKDDAQHLKN 74
+K+ ++ +N
Sbjct: 154 SKESVRNDRN 163
Score = 97 (39.2 bits), Expect = 0.00038, P = 0.00038
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI++K RN+CQ CRL+KC +GM+K+
Sbjct: 130 CIINKVTRNRCQYCRLQKCFEVGMSKE 156
>UNIPROTKB|P10276 [details] [associations]
symbol:RARA "Retinoic acid receptor alpha" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0001657 "ureteric bud
development" evidence=IEA] [GO:0003417 "growth plate cartilage
development" evidence=IEA] [GO:0007281 "germ cell development"
evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0014068 "positive regulation of phosphatidylinositol 3-kinase
cascade" evidence=IEA] [GO:0030425 "dendrite" evidence=IEA]
[GO:0035014 "phosphatidylinositol 3-kinase regulator activity"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0043025 "neuronal cell body" evidence=IEA]
[GO:0045947 "negative regulation of translational initiation"
evidence=IEA] [GO:0051897 "positive regulation of protein kinase B
signaling cascade" evidence=IEA] [GO:0055012 "ventricular cardiac
muscle cell differentiation" evidence=IEA] [GO:0060010 "Sertoli
cell fate commitment" evidence=IEA] [GO:0060591 "chondroblast
differentiation" evidence=IEA] [GO:0061037 "negative regulation of
cartilage development" evidence=IEA] [GO:0070374 "positive
regulation of ERK1 and ERK2 cascade" evidence=IEA] [GO:0071222
"cellular response to lipopolysaccharide" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IDA]
[GO:0051099 "positive regulation of binding" evidence=IMP]
[GO:0003714 "transcription corepressor activity" evidence=IDA]
[GO:0003713 "transcription coactivator activity" evidence=IMP;IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0008284 "positive regulation of cell
proliferation" evidence=IMP] [GO:0045787 "positive regulation of
cell cycle" evidence=IMP] [GO:0005634 "nucleus" evidence=IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=IMP;IDA] [GO:0030853 "negative regulation of granulocyte
differentiation" evidence=IDA] [GO:0019904 "protein domain specific
binding" evidence=IPI] [GO:0071391 "cellular response to estrogen
stimulus" evidence=IDA] [GO:0019899 "enzyme binding" evidence=IPI]
[GO:0005102 "receptor binding" evidence=IDA] [GO:0071300 "cellular
response to retinoic acid" evidence=IDA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IDA] [GO:0046982 "protein
heterodimerization activity" evidence=IDA] [GO:0031490 "chromatin
DNA binding" evidence=IDA] [GO:0043277 "apoptotic cell clearance"
evidence=IMP] [GO:0006468 "protein phosphorylation" evidence=IMP]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0043422 "protein kinase B binding" evidence=IPI] [GO:0051018
"protein kinase A binding" evidence=IDA] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0006367 "transcription initiation from RNA
polymerase II promoter" evidence=TAS] [GO:0010467 "gene expression"
evidence=TAS] [GO:0001972 "retinoic acid binding" evidence=IDA]
[GO:0003708 "retinoic acid receptor activity" evidence=IDA]
[GO:0007165 "signal transduction" evidence=IDA] [GO:0030520
"intracellular estrogen receptor signaling pathway" evidence=IDA]
[GO:0032355 "response to estradiol stimulus" evidence=IDA]
[GO:0032689 "negative regulation of interferon-gamma production"
evidence=IDA] [GO:0032720 "negative regulation of tumor necrosis
factor production" evidence=IDA] [GO:0032736 "positive regulation
of interleukin-13 production" evidence=IDA] [GO:0032753 "positive
regulation of interleukin-4 production" evidence=IDA] [GO:0032754
"positive regulation of interleukin-5 production" evidence=IDA]
[GO:0045630 "positive regulation of T-helper 2 cell
differentiation" evidence=IDA] [GO:0009986 "cell surface"
evidence=IC] [GO:0032526 "response to retinoic acid" evidence=IMP]
[GO:0048384 "retinoic acid receptor signaling pathway"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
Reactome:REACT_71 InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005737 GO:GO:0003714
GO:GO:0045892 GO:GO:0005654 GO:GO:0009986 GO:GO:0032689
GO:GO:0032355 GO:GO:0046872 GO:GO:0045947 GO:GO:0008284
GO:GO:0043025 GO:GO:0030425 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0071300 GO:GO:0045944 GO:GO:0005102 GO:GO:0006468
GO:GO:0007283 Pathway_Interaction_DB:rxr_vdr_pathway GO:GO:0071222
GO:GO:0000122 GO:GO:0000790 GO:GO:0003713 GO:GO:0032720
GO:GO:0007281 GO:GO:0046982 GO:GO:0035264 GO:GO:0030853
GO:GO:0051018 Pathway_Interaction_DB:retinoic_acid_pathway
DrugBank:DB00459 GO:GO:0006367 GO:GO:0051099 GO:GO:0031490
GO:GO:0001657 GO:GO:0030520 GO:GO:0045787 GO:GO:0071391
GO:GO:0043277 GO:GO:0032753 GO:GO:0045630 GO:GO:0003417
HOVERGEN:HBG005606 GO:GO:0001972 GO:GO:0060591 GO:GO:0003708
GO:GO:0032736 GO:GO:0032754 GO:GO:0061037 GO:GO:0055012
GO:GO:0044323 PDB:3KMR PDB:4DQM PDBsum:3KMR PDBsum:4DQM PDB:3A9E
PDBsum:3A9E PDB:3KMZ PDBsum:3KMZ EMBL:U41742 EMBL:U41743
Orphanet:520 EMBL:AB067754 DrugBank:DB00523 DrugBank:DB00926
eggNOG:NOG297448 HOGENOM:HOG000010312 KO:K08527 OMA:RTENVCI
CTD:5914 EMBL:X06614 EMBL:X06538 EMBL:AF088895 EMBL:AF088889
EMBL:AF088890 EMBL:AF088891 EMBL:AF088892 EMBL:AF088893
EMBL:AF088894 EMBL:FJ487576 EMBL:AC080112 EMBL:BC008727
EMBL:BC071733 EMBL:X56058 EMBL:X58685 EMBL:AF283809 IPI:IPI00020071
IPI:IPI00218375 IPI:IPI00922641 PIR:A29491 RefSeq:NP_000955.1
RefSeq:NP_001019980.1 RefSeq:NP_001138773.1 RefSeq:NP_001138774.1
UniGene:Hs.654583 PDB:1DKF PDB:1DSZ PDBsum:1DKF PDBsum:1DSZ
ProteinModelPortal:P10276 SMR:P10276 DIP:DIP-34N IntAct:P10276
MINT:MINT-123081 STRING:P10276 PhosphoSite:P10276 DMDM:133483
PaxDb:P10276 PRIDE:P10276 DNASU:5914 Ensembl:ENST00000254066
Ensembl:ENST00000394081 Ensembl:ENST00000394089
Ensembl:ENST00000425707 GeneID:5914 KEGG:hsa:5914 UCSC:uc002huk.2
GeneCards:GC17P038465 HGNC:HGNC:9864 MIM:180240 MIM:612376
neXtProt:NX_P10276 PharmGKB:PA34225 PhylomeDB:P10276
BindingDB:P10276 ChEMBL:CHEMBL2055 ChiTaRS:RARA DrugBank:DB00210
DrugBank:DB00982 DrugBank:DB04942 DrugBank:DB00799
EvolutionaryTrace:P10276 GenomeRNAi:5914 NextBio:23018
ArrayExpress:P10276 Bgee:P10276 CleanEx:HS_RARA
Genevestigator:P10276 GermOnline:ENSG00000131759 GO:GO:0060010
Uniprot:P10276
Length = 462
Score = 109 (43.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C CI++K RN+CQ CRL+KC +GM
Sbjct: 99 HYGVSACEGCKGFFRRSI----QKNMVYTCHRDKN-CIINKVTRNRCQYCRLQKCFEVGM 153
Query: 65 NKDDAQHLKN 74
+K+ ++ +N
Sbjct: 154 SKESVRNDRN 163
Score = 97 (39.2 bits), Expect = 0.00038, P = 0.00038
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI++K RN+CQ CRL+KC +GM+K+
Sbjct: 130 CIINKVTRNRCQYCRLQKCFEVGMSKE 156
>UNIPROTKB|F1RXC9 [details] [associations]
symbol:RARA "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071391 "cellular response to estrogen stimulus"
evidence=IEA] [GO:0071300 "cellular response to retinoic acid"
evidence=IEA] [GO:0071222 "cellular response to lipopolysaccharide"
evidence=IEA] [GO:0061037 "negative regulation of cartilage
development" evidence=IEA] [GO:0060591 "chondroblast
differentiation" evidence=IEA] [GO:0060010 "Sertoli cell fate
commitment" evidence=IEA] [GO:0055012 "ventricular cardiac muscle
cell differentiation" evidence=IEA] [GO:0051099 "positive
regulation of binding" evidence=IEA] [GO:0051018 "protein kinase A
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045947 "negative regulation of
translational initiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0045630 "positive regulation of T-helper 2 cell
differentiation" evidence=IEA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IEA] [GO:0043422 "protein
kinase B binding" evidence=IEA] [GO:0043277 "apoptotic cell
clearance" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0032754 "positive regulation of interleukin-5
production" evidence=IEA] [GO:0032753 "positive regulation of
interleukin-4 production" evidence=IEA] [GO:0032736 "positive
regulation of interleukin-13 production" evidence=IEA] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032689 "negative regulation of interferon-gamma
production" evidence=IEA] [GO:0032355 "response to estradiol
stimulus" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0030853 "negative regulation of granulocyte
differentiation" evidence=IEA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0001972 "retinoic acid binding" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005737
GO:GO:0003714 GO:GO:0032689 GO:GO:0032355 GO:GO:0046872
GO:GO:0045947 GO:GO:0008284 GO:GO:0043025 GO:GO:0030425
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0006468 GO:GO:0007283 GO:GO:0071222 GO:GO:0000122
GO:GO:0000790 GO:GO:0003713 GO:GO:0032720 GO:GO:0007281
GO:GO:0035264 GO:GO:0030853 GO:GO:0051099 GO:GO:0031490
GO:GO:0001657 GO:GO:0030520 GO:GO:0045787 GO:GO:0071391
GO:GO:0043277 GO:GO:0032753 GO:GO:0045630 GO:GO:0003417
GO:GO:0001972 GO:GO:0060591 GO:GO:0003708 GO:GO:0032736
GO:GO:0032754 GO:GO:0061037 GO:GO:0055012 GO:GO:0044323
GeneTree:ENSGT00680000099662 KO:K08527 OMA:RTENVCI GO:GO:0060010
EMBL:CU928542 RefSeq:XP_003131522.1 RefSeq:XP_003358102.1
UniGene:Ssc.15829 Ensembl:ENSSSCT00000019026 GeneID:396709
KEGG:ssc:396709 ArrayExpress:F1RXC9 Uniprot:F1RXC9
Length = 462
Score = 109 (43.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C CI++K RN+CQ CRL+KC +GM
Sbjct: 99 HYGVSACEGCKGFFRRSI----QKNMVYTCHRDKN-CIINKVTRNRCQYCRLQKCFEVGM 153
Query: 65 NKDDAQHLKN 74
+K+ ++ +N
Sbjct: 154 SKESVRNDRN 163
Score = 97 (39.2 bits), Expect = 0.00038, P = 0.00038
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI++K RN+CQ CRL+KC +GM+K+
Sbjct: 130 CIINKVTRNRCQYCRLQKCFEVGMSKE 156
>UNIPROTKB|G3V956 [details] [associations]
symbol:Rara "Protein Rara" species:10116 "Rattus
norvegicus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 RGD:3534 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 EMBL:CH473948 GO:GO:0003708
OMA:RTENVCI UniGene:Rn.91057 Ensembl:ENSRNOT00000036872
Uniprot:G3V956
Length = 462
Score = 109 (43.4 bits), Expect = 2.0e-05, P = 2.0e-05
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C CI++K RN+CQ CRL+KC +GM
Sbjct: 99 HYGVSACEGCKGFFRRSI----QKNMVYTCHRDKN-CIINKVTRNRCQYCRLQKCFEVGM 153
Query: 65 NKDDAQHLKN 74
+K+ ++ +N
Sbjct: 154 SKESVRNDRN 163
Score = 97 (39.2 bits), Expect = 0.00038, P = 0.00038
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI++K RN+CQ CRL+KC +GM+K+
Sbjct: 130 CIINKVTRNRCQYCRLQKCFEVGMSKE 156
>UNIPROTKB|A8MUP8 [details] [associations]
symbol:RARA "Retinoic acid receptor alpha" species:9606
"Homo sapiens" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 EMBL:CH471152 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
HOVERGEN:HBG005606 GO:GO:0003708 HOGENOM:HOG000010312 EMBL:AC080112
UniGene:Hs.654583 HGNC:HGNC:9864 ChiTaRS:RARA IPI:IPI00014923
SMR:A8MUP8 STRING:A8MUP8 Ensembl:ENST00000394086 Uniprot:A8MUP8
Length = 478
Score = 109 (43.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C CI++K RN+CQ CRL+KC +GM
Sbjct: 115 HYGVSACEGCKGFFRRSI----QKNMVYTCHRDKN-CIINKVTRNRCQYCRLQKCFEVGM 169
Query: 65 NKDDAQHLKN 74
+K+ ++ +N
Sbjct: 170 SKESVRNDRN 179
Score = 97 (39.2 bits), Expect = 0.00040, P = 0.00040
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI++K RN+CQ CRL+KC +GM+K+
Sbjct: 146 CIINKVTRNRCQYCRLQKCFEVGMSKE 172
>ZFIN|ZDB-GENE-040724-215 [details] [associations]
symbol:rorcb "RAR-related orphan receptor C b"
species:7955 "Danio rerio" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430
ZFIN:ZDB-GENE-040724-215 GO:GO:0005634 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0030522
HOGENOM:HOG000010200 HOVERGEN:HBG106848 EMBL:DQ017628
IPI:IPI00498218 UniGene:Dr.12904 InParanoid:Q1L678 Uniprot:Q1L678
Length = 480
Score = 109 (43.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 18/44 (40%), Positives = 33/44 (75%)
Query: 73 KNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+N+ +Y +C+ + C++D+ +RN+CQ CRL+KCL +GM++D
Sbjct: 39 QNNAMY--SCSR--QRNCLIDRTNRNRCQHCRLQKCLALGMSRD 78
Score = 107 (42.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD 67
TC+ G + N +C C++D+ +RN+CQ CRL+KCL +GM++D
Sbjct: 26 TCE-GCKGFFRRSQQNNAMYSCSRQRN-CLIDRTNRNRCQHCRLQKCLALGMSRD 78
>UNIPROTKB|P04625 [details] [associations]
symbol:THRA "Thyroid hormone receptor alpha" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0004887 HOVERGEN:HBG005606
PDB:3UVV PDBsum:3UVV CTD:7067 KO:K05547 EMBL:X04854 EMBL:Y00987
IPI:IPI00600673 PIR:A25236 RefSeq:NP_990644.1 UniGene:Gga.725
ProteinModelPortal:P04625 SMR:P04625 IntAct:P04625 STRING:P04625
GeneID:396251 KEGG:gga:396251 eggNOG:NOG239523 BindingDB:P04625
NextBio:20816303 Uniprot:P04625
Length = 408
Score = 108 (43.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 22/54 (40%), Positives = 30/54 (55%)
Query: 14 CQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD 67
C+ R I H +C+ G C++DK RNQCQ CR KKC+++GM D
Sbjct: 71 CKGFFRRTIQKNLHPTY--SCKYD-GCCVIDKITRNQCQLCRFKKCISVGMAMD 121
Score = 104 (41.7 bits), Expect = 5.6e-05, P = 5.6e-05
Identities = 32/103 (31%), Positives = 51/103 (49%)
Query: 18 TERCIVDKAHRNQCQACQAGTGRCIV--DKA--HRNQCQACRLKKCLNMGMNKDDAQHLK 73
+ +C+V + + +C+V DKA + +C C + C G + Q K
Sbjct: 28 SSQCLVKSSMSGYIPSYLDKDEQCVVCGDKATGYHYRCITC--EGC--KGFFRRTIQ--K 81
Query: 74 NSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
N L ++C + C++DK RNQCQ CR KKC+++GM D
Sbjct: 82 N-LHPTYSCK--YDGCCVIDKITRNQCQLCRFKKCISVGMAMD 121
>UNIPROTKB|E2R2V0 [details] [associations]
symbol:RARA "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0071391 "cellular response to estrogen
stimulus" evidence=IEA] [GO:0071300 "cellular response to retinoic
acid" evidence=IEA] [GO:0071222 "cellular response to
lipopolysaccharide" evidence=IEA] [GO:0061037 "negative regulation
of cartilage development" evidence=IEA] [GO:0060591 "chondroblast
differentiation" evidence=IEA] [GO:0060010 "Sertoli cell fate
commitment" evidence=IEA] [GO:0055012 "ventricular cardiac muscle
cell differentiation" evidence=IEA] [GO:0051099 "positive
regulation of binding" evidence=IEA] [GO:0051018 "protein kinase A
binding" evidence=IEA] [GO:0046982 "protein heterodimerization
activity" evidence=IEA] [GO:0045947 "negative regulation of
translational initiation" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045787 "positive regulation of cell cycle"
evidence=IEA] [GO:0045630 "positive regulation of T-helper 2 cell
differentiation" evidence=IEA] [GO:0044323 "retinoic
acid-responsive element binding" evidence=IEA] [GO:0043422 "protein
kinase B binding" evidence=IEA] [GO:0043277 "apoptotic cell
clearance" evidence=IEA] [GO:0043025 "neuronal cell body"
evidence=IEA] [GO:0035264 "multicellular organism growth"
evidence=IEA] [GO:0032754 "positive regulation of interleukin-5
production" evidence=IEA] [GO:0032753 "positive regulation of
interleukin-4 production" evidence=IEA] [GO:0032736 "positive
regulation of interleukin-13 production" evidence=IEA] [GO:0032720
"negative regulation of tumor necrosis factor production"
evidence=IEA] [GO:0032689 "negative regulation of interferon-gamma
production" evidence=IEA] [GO:0032355 "response to estradiol
stimulus" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0030853 "negative regulation of granulocyte
differentiation" evidence=IEA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=IEA] [GO:0030425 "dendrite"
evidence=IEA] [GO:0019904 "protein domain specific binding"
evidence=IEA] [GO:0008284 "positive regulation of cell
proliferation" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0007283 "spermatogenesis" evidence=IEA]
[GO:0007281 "germ cell development" evidence=IEA] [GO:0006468
"protein phosphorylation" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005102 "receptor binding" evidence=IEA]
[GO:0003714 "transcription corepressor activity" evidence=IEA]
[GO:0003713 "transcription coactivator activity" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0001972 "retinoic acid binding" evidence=IEA] [GO:0001657
"ureteric bud development" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0003708 "retinoic
acid receptor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005737
GO:GO:0003714 GO:GO:0032689 GO:GO:0032355 GO:GO:0046872
GO:GO:0045947 GO:GO:0008284 GO:GO:0043025 GO:GO:0030425
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0071300 GO:GO:0045944
GO:GO:0006468 GO:GO:0007283 GO:GO:0071222 GO:GO:0000122
GO:GO:0000790 GO:GO:0003713 GO:GO:0032720 GO:GO:0007281
GO:GO:0035264 GO:GO:0030853 GO:GO:0051099 GO:GO:0031490
GO:GO:0001657 GO:GO:0030520 GO:GO:0045787 GO:GO:0071391
GO:GO:0043277 GO:GO:0032753 GO:GO:0045630 GO:GO:0003417
GO:GO:0001972 GO:GO:0060591 GO:GO:0003708 GO:GO:0032736
GO:GO:0032754 GO:GO:0061037 GO:GO:0055012 GO:GO:0044323
GeneTree:ENSGT00680000099662 OMA:RTENVCI GO:GO:0060010
EMBL:AAEX03006463 EMBL:AAEX03006464 EMBL:AAEX03006465
Ensembl:ENSCAFT00000035664 Uniprot:E2R2V0
Length = 486
Score = 109 (43.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 23/70 (32%), Positives = 37/70 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C CI++K RN+CQ CRL+KC +GM
Sbjct: 123 HYGVSACEGCKGFFRRSI----QKNMVYTCHRDKN-CIINKVTRNRCQYCRLQKCFEVGM 177
Query: 65 NKDDAQHLKN 74
+K+ ++ +N
Sbjct: 178 SKESVRNDRN 187
Score = 97 (39.2 bits), Expect = 0.00041, P = 0.00041
Identities = 15/27 (55%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI++K RN+CQ CRL+KC +GM+K+
Sbjct: 154 CIINKVTRNRCQYCRLQKCFEVGMSKE 180
>FB|FBgn0000448 [details] [associations]
symbol:Hr46 "Hormone receptor-like in 46" species:7227
"Drosophila melanogaster" [GO:0000977 "RNA polymerase II regulatory
region sequence-specific DNA binding" evidence=IDA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IDA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IDA]
[GO:0005634 "nucleus" evidence=ISS;NAS;IDA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=ISS;NAS;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0007552 "metamorphosis" evidence=TAS] [GO:0040034
"regulation of development, heterochronic" evidence=TAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0043401 "steroid
hormone mediated signaling pathway" evidence=IEA] [GO:0003707
"steroid hormone receptor activity" evidence=IEA] [GO:0004887
"thyroid hormone receptor activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0016319 "mushroom body development"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 EMBL:AE013599 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0000122 GO:GO:0007552 GO:GO:0016319 GO:GO:0040034
GO:GO:0000977 GO:GO:0004887 eggNOG:NOG324222 EMBL:M90806 PIR:A46146
RefSeq:NP_001246236.1 RefSeq:NP_788303.1 UniGene:Dm.5036
ProteinModelPortal:P31396 SMR:P31396 IntAct:P31396 STRING:P31396
PRIDE:P31396 EnsemblMetazoa:FBtr0088368 EnsemblMetazoa:FBtr0306345
GeneID:36073 KEGG:dme:Dmel_CG33183 CTD:36073 FlyBase:FBgn0000448
GeneTree:ENSGT00700000104109 InParanoid:P31396 KO:K14033
OrthoDB:EOG4HT77R GenomeRNAi:36073 NextBio:796700 Bgee:P31396
GermOnline:CG33183 Uniprot:P31396
Length = 487
Score = 109 (43.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 16/28 (57%), Positives = 25/28 (89%)
Query: 40 RCIVDKAHRNQCQACRLKKCLNMGMNKD 67
+C+VD+ +RN+CQ CRL+KCL +GM++D
Sbjct: 92 QCVVDRVNRNRCQYCRLQKCLKLGMSRD 119
Score = 109 (43.4 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 16/28 (57%), Positives = 25/28 (89%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+C+VD+ +RN+CQ CRL+KCL +GM++D
Sbjct: 92 QCVVDRVNRNRCQYCRLQKCLKLGMSRD 119
>UNIPROTKB|I3L5U2 [details] [associations]
symbol:NR3C2 "Mineralocorticoid receptor" species:9823 "Sus
scrofa" [GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0043565 "sequence-specific
DNA binding" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00398 PROSITE:PS51030
SMART:SM00399 GO:GO:0005634 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00700000104072
EMBL:FP102763 EMBL:FP245521 Ensembl:ENSSSCT00000022444 OMA:INQSARC
Uniprot:I3L5U2
Length = 219
Score = 103 (41.3 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 18/30 (60%), Positives = 20/30 (66%)
Query: 36 AGTGRCIVDKAHRNQCQACRLKKCLNMGMN 65
AG CI+DK R C ACRL+KCL GMN
Sbjct: 23 AGRNDCIIDKIRRKNCPACRLQKCLQAGMN 52
Score = 97 (39.2 bits), Expect = 0.00010, P = 0.00010
Identities = 18/43 (41%), Positives = 24/43 (55%)
Query: 72 LKNSLLYEFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMN 114
+K + + C + CI+DK R C ACRL+KCL GMN
Sbjct: 12 MKKRWQHNYLCAGRND--CIIDKIRRKNCPACRLQKCLQAGMN 52
>UNIPROTKB|F1N9Q8 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003078
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003708
GeneTree:ENSGT00680000099662 OMA:QEVFVCI EMBL:AADN02001127
EMBL:AADN02001120 EMBL:AADN02001121 EMBL:AADN02001122
EMBL:AADN02001123 EMBL:AADN02001124 EMBL:AADN02001125
EMBL:AADN02001126 IPI:IPI00821263 ProteinModelPortal:F1N9Q8
Ensembl:ENSGALT00000029066 ArrayExpress:F1N9Q8 Uniprot:F1N9Q8
Length = 415
Score = 108 (43.1 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C C+++K RN+CQ CRL+KC +GM
Sbjct: 93 HYGVSACEGCKGFFRRSI----QKNMVYTCHRDKN-CVINKVTRNRCQYCRLQKCFEVGM 147
Query: 65 NKDDAQHLKN 74
+K+ ++ +N
Sbjct: 148 SKESVRNDRN 157
Score = 96 (38.9 bits), Expect = 0.00042, P = 0.00042
Identities = 14/27 (51%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C+++K RN+CQ CRL+KC +GM+K+
Sbjct: 124 CVINKVTRNRCQYCRLQKCFEVGMSKE 150
>FB|FBgn0004865 [details] [associations]
symbol:Eip78C "Ecdysone-induced protein 78C" species:7227
"Drosophila melanogaster" [GO:0003700 "sequence-specific DNA
binding transcription factor activity" evidence=ISS] [GO:0005634
"nucleus" evidence=ISS;NAS] [GO:0004879 "ligand-activated
sequence-specific DNA binding RNA polymerase II transcription
factor activity" evidence=ISS;NAS] [GO:0002165 "instar larval or
pupal development" evidence=NAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 EMBL:AE014296 GO:GO:0046872 GO:GO:0004879
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 KO:K08701 eggNOG:NOG324222
EMBL:U01087 EMBL:U01088 EMBL:X98881 EMBL:X98882 EMBL:AF238308
EMBL:AF238309 EMBL:X73045 PIR:A49070 PIR:B49070 PIR:S43435
RefSeq:NP_001246862.1 RefSeq:NP_001246863.1 RefSeq:NP_524195.2
RefSeq:NP_730609.3 ProteinModelPortal:P45447 SMR:P45447
STRING:P45447 GeneID:40345 KEGG:dme:Dmel_CG18023 CTD:40345
FlyBase:FBgn0004865 InParanoid:P45447 OrthoDB:EOG4GMSC7
GenomeRNAi:40345 NextBio:818285 Bgee:P45447 GermOnline:CG18023
Uniprot:P45447
Length = 866
Score = 112 (44.5 bits), Expect = 2.1e-05, P = 2.1e-05
Identities = 24/67 (35%), Positives = 38/67 (56%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+T C+ G R + K +C G+C+V + +RN+CQ CR KKCL+ GM
Sbjct: 378 HYGVTSCEGCK-GFFRRSIQKQIEYRCLR----DGKCLVIRLNRNRCQYCRFKKCLSAGM 432
Query: 65 NKDDAQH 71
++D ++
Sbjct: 433 SRDSVRY 439
Score = 101 (40.6 bits), Expect = 0.00032, P = 0.00032
Identities = 18/38 (47%), Positives = 28/38 (73%)
Query: 79 EFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
E+ C L + +C+V + +RN+CQ CR KKCL+ GM++D
Sbjct: 400 EYRC--LRDGKCLVIRLNRNRCQYCRFKKCLSAGMSRD 435
>ZFIN|ZDB-GENE-070824-4 [details] [associations]
symbol:nr4a3 "nuclear receptor subfamily 4, group A,
member 3" species:7955 "Danio rerio" [GO:0043401 "steroid hormone
mediated signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0004879
"ligand-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043565 "sequence-specific DNA
binding" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003070
InterPro:IPR003073 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR01284 PRINTS:PR01287 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-070824-4 GO:GO:0005634
GO:GO:0046872 GO:GO:0004879 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0030522 eggNOG:NOG245120 HOGENOM:HOG000230925
HOVERGEN:HBG052663 OrthoDB:EOG4894MB EMBL:DQ017611 IPI:IPI00510220
UniGene:Dr.76117 ProteinModelPortal:Q1L695 SMR:Q1L695
InParanoid:Q1L695 Uniprot:Q1L695
Length = 594
Score = 110 (43.8 bits), Expect = 2.2e-05, P = 2.2e-05
Identities = 32/84 (38%), Positives = 43/84 (51%)
Query: 36 AGTGRCIV--DKAHRNQCQACRLKKCLNM-GMNKDDAQHLKNSLLYEFACTNLVELRCIV 92
+G G C V D A CQ ++ C G K Q KN+ ++ C L C V
Sbjct: 250 SGEGTCAVCGDNA---ACQHYGVRTCEGCKGFFKRTVQ--KNA---KYVC--LASKNCPV 299
Query: 93 DKAHRNQCQACRLKKCLNMGMNKD 116
DK RN+CQ CR +KCL++GM K+
Sbjct: 300 DKRRRNRCQYCRFQKCLSVGMVKE 323
>FB|FBgn0000560 [details] [associations]
symbol:eg "eagle" species:7227 "Drosophila melanogaster"
[GO:0007417 "central nervous system development" evidence=IMP]
[GO:0005634 "nucleus" evidence=ISS;NAS] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=ISS] [GO:0004879 "ligand-activated sequence-specific DNA
binding RNA polymerase II transcription factor activity"
evidence=ISS;NAS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] InterPro:IPR001628 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 GO:GO:0005634 GO:GO:0030154
EMBL:AE014296 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
GO:GO:0007417 GeneTree:ENSGT00700000104361 EMBL:X16631 EMBL:D43634
EMBL:D43635 EMBL:BT028846 PIR:S06010 RefSeq:NP_524206.1
RefSeq:NP_730689.1 UniGene:Dm.2504 ProteinModelPortal:P15370
SMR:P15370 IntAct:P15370 MINT:MINT-834363 STRING:P15370
EnsemblMetazoa:FBtr0078437 EnsemblMetazoa:FBtr0078438 GeneID:40428
KEGG:dme:Dmel_CG7383 CTD:40428 FlyBase:FBgn0000560 eggNOG:NOG303018
InParanoid:P15370 KO:K08706 OMA:FRSHSEP OrthoDB:EOG43R23N
PhylomeDB:P15370 GenomeRNAi:40428 NextBio:818724 Bgee:P15370
GermOnline:CG7383 Uniprot:P15370
Length = 373
Score = 107 (42.7 bits), Expect = 2.3e-05, P = 2.3e-05
Identities = 17/44 (38%), Positives = 31/44 (70%)
Query: 39 GRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQHLKNSLLYEFAC 82
G C+++K +R C+ACRL+KCL +GM+K +++ + S ++ C
Sbjct: 46 GDCVINKKNRTACKACRLRKCLLVGMSKSGSRYGRRSNWFKIHC 89
Score = 98 (39.6 bits), Expect = 0.00022, P = 0.00022
Identities = 15/28 (53%), Positives = 23/28 (82%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKDG 117
C+++K +R C+ACRL+KCL +GM+K G
Sbjct: 48 CVINKKNRTACKACRLRKCLLVGMSKSG 75
>UNIPROTKB|P22448 [details] [associations]
symbol:RARB "Retinoic acid receptor beta" species:9031
"Gallus gallus" [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003708 "retinoic acid receptor activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0001657 "ureteric bud development" evidence=IEA]
[GO:0003417 "growth plate cartilage development" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0021756 "striatum development" evidence=IEA]
[GO:0022008 "neurogenesis" evidence=IEA] [GO:0032331 "negative
regulation of chondrocyte differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035264 "multicellular organism growth" evidence=IEA]
[GO:0043065 "positive regulation of apoptotic process"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0048048
"embryonic eye morphogenesis" evidence=IEA] [GO:0048566 "embryonic
digestive tract development" evidence=IEA] [GO:0055012 "ventricular
cardiac muscle cell differentiation" evidence=IEA] [GO:0061037
"negative regulation of cartilage development" evidence=IEA]
[GO:0035108 "limb morphogenesis" evidence=IDA] [GO:0071729 "beak
morphogenesis" evidence=IDA] [GO:0032526 "response to retinoic
acid" evidence=IDA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR003078 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR01292 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0008285
GO:GO:0046872 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0000122 GO:GO:0043065 GO:GO:0032526 GO:GO:0035108
GO:GO:0032331 GO:GO:0071729 HOVERGEN:HBG005606 GO:GO:0003708
GO:GO:0061037 eggNOG:NOG297448 GeneTree:ENSGT00680000099662
HOGENOM:HOG000010312 EMBL:X56674 EMBL:X57341 EMBL:X57340
EMBL:X57339 EMBL:S75943 EMBL:X59473 EMBL:S63196 IPI:IPI00580878
IPI:IPI00589689 PIR:A43786 PIR:I51272 PIR:S13512 RefSeq:NP_990657.1
UniGene:Gga.2668 UniGene:Gga.51498 ProteinModelPortal:P22448
SMR:P22448 STRING:P22448 Ensembl:ENSGALT00000037748 GeneID:396266
KEGG:gga:396266 CTD:5915 InParanoid:P22448 KO:K08528
NextBio:20816318 ArrayExpress:P22448 Uniprot:P22448
Length = 455
Score = 108 (43.1 bits), Expect = 2.4e-05, P = 2.4e-05
Identities = 22/70 (31%), Positives = 37/70 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G++ C+ R I +N C C+++K RN+CQ CRL+KC +GM
Sbjct: 99 HYGVSACEGCKGFFRRSI----QKNMVYTCHRDKN-CVINKVTRNRCQYCRLQKCFEVGM 153
Query: 65 NKDDAQHLKN 74
+K+ ++ +N
Sbjct: 154 SKESVRNDRN 163
Score = 96 (38.9 bits), Expect = 0.00048, P = 0.00048
Identities = 14/27 (51%), Positives = 22/27 (81%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
C+++K RN+CQ CRL+KC +GM+K+
Sbjct: 130 CVINKVTRNRCQYCRLQKCFEVGMSKE 156
>ZFIN|ZDB-GENE-060613-1 [details] [associations]
symbol:thrab "thyroid hormone receptor alpha b"
species:7955 "Danio rerio" [GO:0048384 "retinoic acid receptor
signaling pathway" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0003708 "retinoic acid receptor
activity" evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0004887 "thyroid hormone receptor activity"
evidence=IEA] [GO:0046872 "metal ion binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR001728 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 ZFIN:ZDB-GENE-060613-1 GO:GO:0005634 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0004887
GeneTree:ENSGT00680000099662 EMBL:BX510316 IPI:IPI00897050
Ensembl:ENSDART00000074549 Uniprot:F1QME0
Length = 391
Score = 107 (42.7 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 23/54 (42%), Positives = 30/54 (55%)
Query: 14 CQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD 67
C+ R I H + +C+ G CI+DK RNQCQ CR KKC+ +GM D
Sbjct: 54 CKGFFRRTIQKNLHPSY--SCKYD-GCCIIDKITRNQCQLCRFKKCIAVGMAMD 104
Score = 101 (40.6 bits), Expect = 0.00011, P = 0.00011
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI+DK RNQCQ CR KKC+ +GM D
Sbjct: 78 CIIDKITRNQCQLCRFKKCIAVGMAMD 104
>UNIPROTKB|F1M839 [details] [associations]
symbol:Esr1 "Estrogen receptor" species:10116 "Rattus
norvegicus" [GO:0001046 "core promoter sequence-specific DNA
binding" evidence=IEA] [GO:0001547 "antral ovarian follicle growth"
evidence=IEA] [GO:0002064 "epithelial cell development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005496 "steroid binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0008013 "beta-catenin binding"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0008209 "androgen metabolic process"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0008584 "male gonad development" evidence=IEA] [GO:0010629
"negative regulation of gene expression" evidence=IEA] [GO:0034056
"estrogen response element binding" evidence=IEA] [GO:0038052
"estrogen-activated sequence-specific DNA binding RNA polymerase II
transcription factor activity" evidence=IEA] [GO:0042802 "identical
protein binding" evidence=IEA] [GO:0042981 "regulation of apoptotic
process" evidence=IEA] [GO:0043124 "negative regulation of I-kappaB
kinase/NF-kappaB cascade" evidence=IEA] [GO:0043433 "negative
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0045429 "positive regulation of nitric
oxide biosynthetic process" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0048146 "positive regulation of fibroblast
proliferation" evidence=IEA] [GO:0048386 "positive regulation of
retinoic acid receptor signaling pathway" evidence=IEA] [GO:0051000
"positive regulation of nitric-oxide synthase activity"
evidence=IEA] [GO:0051091 "positive regulation of sequence-specific
DNA binding transcription factor activity" evidence=IEA]
[GO:0060065 "uterus development" evidence=IEA] [GO:0060068 "vagina
development" evidence=IEA] [GO:0060523 "prostate epithelial cord
elongation" evidence=IEA] [GO:0060527 "prostate epithelial cord
arborization involved in prostate glandular acinus morphogenesis"
evidence=IEA] [GO:0060687 "regulation of branching involved in
prostate gland morphogenesis" evidence=IEA] [GO:0060745 "mammary
gland branching involved in pregnancy" evidence=IEA] [GO:0060749
"mammary gland alveolus development" evidence=IEA] [GO:0060750
"epithelial cell proliferation involved in mammary gland duct
elongation" evidence=IEA] [GO:0071391 "cellular response to
estrogen stimulus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001292 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 Pfam:PF02159 PIRSF:PIRSF002527
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00543 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:2581 GO:GO:0005886
GO:GO:0005634 GO:GO:0005737 GO:GO:0051091 GO:GO:0042981
GO:GO:0005496 GO:GO:0046872 GO:GO:0051000 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944
GO:GO:0003682 GO:GO:0008584 GO:GO:0043124 GO:GO:0008209
GO:GO:0010629 GO:GO:0043433 GO:GO:0060749 GO:GO:0045429
GO:GO:0048146 GO:GO:0048386 GeneTree:ENSGT00700000104072
GO:GO:0060750 GO:GO:0030520 GO:GO:0002064 GO:GO:0060068
GO:GO:0001046 GO:GO:0071391 GO:GO:0060687 GO:GO:0001547
GO:GO:0034056 GO:GO:0038052 GO:GO:0060745 GO:GO:0060527
GO:GO:0060523 GO:GO:0060065 IPI:IPI00201392
Ensembl:ENSRNOT00000026350 ArrayExpress:F1M839 Uniprot:F1M839
Length = 462
Score = 108 (43.1 bits), Expect = 2.5e-05, P = 2.5e-05
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 201 HYGVWSCEGCKAFFKRSI--QGHNDYM--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 255
Query: 65 NK 66
K
Sbjct: 256 MK 257
Score = 97 (39.2 bits), Expect = 0.00038, P = 0.00038
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 231 QCTIDKNRRKSCQACRLRKCYEVGMMKGG 259
>UNIPROTKB|F1NMB7 [details] [associations]
symbol:ESR2 "Estrogen receptor beta" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0001046 "core promoter sequence-specific DNA binding"
evidence=IEA] [GO:0001541 "ovarian follicle development"
evidence=IEA] [GO:0001764 "neuron migration" evidence=IEA]
[GO:0005739 "mitochondrion" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0019899 "enzyme binding"
evidence=IEA] [GO:0030520 "intracellular estrogen receptor
signaling pathway" evidence=IEA] [GO:0034056 "estrogen response
element binding" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0050680 "negative regulation
of epithelial cell proliferation" evidence=IEA] [GO:0051091
"positive regulation of sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0060065 "uterus development"
evidence=IEA] [GO:0060068 "vagina development" evidence=IEA]
[GO:0060740 "prostate gland epithelium morphogenesis" evidence=IEA]
[GO:0060743 "epithelial cell maturation involved in prostate gland
development" evidence=IEA] [GO:0060766 "negative regulation of
androgen receptor signaling pathway" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR001723
InterPro:IPR008946 InterPro:IPR013088 InterPro:IPR024178
Pfam:PF00104 Pfam:PF00105 PIRSF:PIRSF002527 PRINTS:PR00047
PRINTS:PR00398 PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399
SMART:SM00430 GO:GO:0005739 GO:GO:0005634 GO:GO:0051091
GO:GO:0005496 GO:GO:0046872 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0000122 GO:GO:0043065 GO:GO:0050680
GeneTree:ENSGT00700000104072 GO:GO:0030520 GO:GO:0001046
GO:GO:0060766 GO:GO:0034056 OMA:LYAEPQK InterPro:IPR021064
Pfam:PF12497 IPI:IPI00583235 EMBL:AADN02003851 EMBL:AADN02003849
EMBL:AADN02003850 Ensembl:ENSGALT00000019259 Uniprot:F1NMB7
Length = 472
Score = 108 (43.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 116 HYGVWSCEGCKAFFKRSI--QGHNDYI--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 170
Query: 65 NK 66
K
Sbjct: 171 MK 172
Score = 95 (38.5 bits), Expect = 0.00065, P = 0.00065
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 146 QCTIDKNRRKSCQACRLRKCYEVGMMKCG 174
>UNIPROTKB|Q9PTU5 [details] [associations]
symbol:ESR2 "Estrogen receptor beta" species:9031 "Gallus
gallus" [GO:0003700 "sequence-specific DNA binding transcription
factor activity" evidence=IEA] [GO:0003707 "steroid hormone
receptor activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0005496 "steroid binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 HOVERGEN:HBG108344 HOGENOM:HOG000233468
CTD:2100 eggNOG:NOG271979 KO:K08551 OrthoDB:EOG41RPTT
InterPro:IPR021064 Pfam:PF12497 EMBL:AB036415 IPI:IPI00583235
RefSeq:NP_990125.1 UniGene:Gga.314 ProteinModelPortal:Q9PTU5
SMR:Q9PTU5 STRING:Q9PTU5 GeneID:395575 KEGG:gga:395575
InParanoid:Q9PTU5 NextBio:20815649 Uniprot:Q9PTU5
Length = 472
Score = 108 (43.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 116 HYGVWSCEGCKAFFKRSI--QGHNDYI--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 170
Query: 65 NK 66
K
Sbjct: 171 MK 172
Score = 95 (38.5 bits), Expect = 0.00065, P = 0.00065
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 146 QCTIDKNRRKSCQACRLRKCYEVGMMKCG 174
>ZFIN|ZDB-GENE-110411-42 [details] [associations]
symbol:si:dkey-80m2.2 "si:dkey-80m2.2" species:7955
"Danio rerio" [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
[GO:0004879 "ligand-activated sequence-specific DNA binding RNA
polymerase II transcription factor activity" evidence=IEA]
[GO:0046872 "metal ion binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR003079
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR01293 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 ZFIN:ZDB-GENE-110411-42
GO:GO:0005634 GO:GO:0046872 GO:GO:0004879 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0030522 GeneTree:ENSGT00700000104109
EMBL:CR388088 EMBL:CR628385 EMBL:CR749162 IPI:IPI00995584
ProteinModelPortal:E7FBX0 Ensembl:ENSDART00000128798 Uniprot:E7FBX0
Length = 480
Score = 108 (43.1 bits), Expect = 2.6e-05, P = 2.6e-05
Identities = 17/38 (44%), Positives = 29/38 (76%)
Query: 79 EFACTNLVELRCIVDKAHRNQCQACRLKKCLNMGMNKD 116
+++C+ + C +D+A RN+CQ+CRLKKC+ GM++D
Sbjct: 44 QYSCSR--QSNCPIDRASRNRCQSCRLKKCVAQGMSRD 79
Score = 107 (42.7 bits), Expect = 3.4e-05, P = 3.4e-05
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 28 RNQCQACQAGTGR---CIVDKAHRNQCQACRLKKCLNMGMNKD 67
R+Q + Q R C +D+A RN+CQ+CRLKKC+ GM++D
Sbjct: 37 RSQSSSVQYSCSRQSNCPIDRASRNRCQSCRLKKCVAQGMSRD 79
>UNIPROTKB|P15204 [details] [associations]
symbol:thra-a "Thyroid hormone receptor alpha-A"
species:8355 "Xenopus laevis" [GO:0004887 "thyroid hormone receptor
activity" evidence=IDA;TAS] [GO:0042803 "protein homodimerization
activity" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA;IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0046965 "retinoid X
receptor binding" evidence=IPI] [GO:0046966 "thyroid hormone
receptor binding" evidence=IPI] [GO:0046982 "protein
heterodimerization activity" evidence=IPI] [GO:0070324 "thyroid
hormone binding" evidence=IDA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR001728
InterPro:IPR008946 InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105
PRINTS:PR00047 PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0045893 GO:GO:0042803 GO:GO:0046872 GO:GO:0043565
GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10
SUPFAM:SSF48508 GO:GO:0070324 GO:GO:0004887 HOVERGEN:HBG005606
EMBL:M35343 EMBL:X17385 EMBL:BC170071 EMBL:BC170077 PIR:S09605
RefSeq:NP_001081595.1 UniGene:Xl.309 ProteinModelPortal:P15204
GeneID:397942 KEGG:xla:397942 CTD:7067 Xenbase:XB-GENE-5966552
KO:K05547 Uniprot:P15204
Length = 418
Score = 107 (42.7 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 23/54 (42%), Positives = 30/54 (55%)
Query: 14 CQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD 67
C+ R I H + +C+ G CI+DK RNQCQ CR KKC+ +GM D
Sbjct: 81 CKGFFRRTIQKNLHPSY--SCKYD-GCCIIDKITRNQCQLCRFKKCIAVGMAMD 131
Score = 101 (40.6 bits), Expect = 0.00012, P = 0.00012
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI+DK RNQCQ CR KKC+ +GM D
Sbjct: 105 CIIDKITRNQCQLCRFKKCIAVGMAMD 131
>UNIPROTKB|P18115 [details] [associations]
symbol:thra-b "Thyroid hormone receptor alpha-B"
species:8355 "Xenopus laevis" [GO:0004887 "thyroid hormone receptor
activity" evidence=TAS] [GO:0042803 "protein homodimerization
activity" evidence=IDA] [GO:0043565 "sequence-specific DNA binding"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0046965 "retinoid X receptor
binding" evidence=IPI] [GO:0046982 "protein heterodimerization
activity" evidence=IPI] [GO:0070324 "thyroid hormone binding"
evidence=IDA] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR001728 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PRINTS:PR00398 PRINTS:PR00546 PROSITE:PS00031 PROSITE:PS51030
SMART:SM00399 SMART:SM00430 GO:GO:0005634 GO:GO:0045893
GO:GO:0042803 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0070324 GO:GO:0004887 HOVERGEN:HBG005606 EMBL:M35344
EMBL:L76285 PIR:B36067 ProteinModelPortal:P18115 SMR:P18115
Uniprot:P18115
Length = 418
Score = 107 (42.7 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 23/54 (42%), Positives = 30/54 (55%)
Query: 14 CQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKD 67
C+ R I H + +C+ G CI+DK RNQCQ CR KKC+ +GM D
Sbjct: 81 CKGFFRRTIQKNLHPSY--SCKYD-GCCIIDKITRNQCQLCRFKKCIAVGMAMD 131
Score = 101 (40.6 bits), Expect = 0.00012, P = 0.00012
Identities = 17/27 (62%), Positives = 20/27 (74%)
Query: 90 CIVDKAHRNQCQACRLKKCLNMGMNKD 116
CI+DK RNQCQ CR KKC+ +GM D
Sbjct: 105 CIIDKITRNQCQLCRFKKCIAVGMAMD 131
>WB|WBGene00019116 [details] [associations]
symbol:nhr-143 species:6239 "Caenorhabditis elegans"
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA] [GO:0003707 "steroid hormone receptor
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0043565 "sequence-specific DNA binding" evidence=IEA]
InterPro:IPR000536 InterPro:IPR001628 InterPro:IPR008946
InterPro:IPR013088 Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 HSSP:P03372 HOGENOM:HOG000015815
GeneTree:ENSGT00690000102489 EMBL:FO081516 PIR:T32114
RefSeq:NP_505317.2 UniGene:Cel.3276 ProteinModelPortal:O16753
SMR:O16753 EnsemblMetazoa:F59E11.11 GeneID:186626
KEGG:cel:CELE_F59E11.11 UCSC:F59E11.11 CTD:186626
WormBase:F59E11.11 eggNOG:NOG328315 InParanoid:O16753 OMA:GMTPDNI
NextBio:932472 Uniprot:O16753
Length = 422
Score = 107 (42.7 bits), Expect = 2.8e-05, P = 2.8e-05
Identities = 25/67 (37%), Positives = 36/67 (53%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+T C A R IV +R +C++ + C K R QC+ CRL+KC ++GM
Sbjct: 37 HFGVTACRACAAFFRRMIVGTGYRQKCRSYKT----C-EPKDGRWQCKKCRLEKCYSLGM 91
Query: 65 NKDDAQH 71
D+ QH
Sbjct: 92 TPDNIQH 98
>UNIPROTKB|D4AEI3 [details] [associations]
symbol:Esr2 "Estrogen receptor beta" species:10116 "Rattus
norvegicus" [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] [GO:0003707 "steroid
hormone receptor activity" evidence=IEA] [GO:0005496 "steroid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0043565
"sequence-specific DNA binding" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 RGD:2582 GO:GO:0005634
GO:GO:0005496 GO:GO:0046872 GO:GO:0043565 GO:GO:0003707
GO:GO:0008270 Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508
GO:GO:0003700 GO:GO:0006351 GeneTree:ENSGT00700000104072
InterPro:IPR021064 Pfam:PF12497 IPI:IPI00959048
ProteinModelPortal:D4AEI3 Ensembl:ENSRNOT00000007109
ArrayExpress:D4AEI3 Uniprot:D4AEI3
Length = 430
Score = 107 (42.7 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 160 HYGVWSCEGCKAFFKRSI--QGHNDYI--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 214
Query: 65 NK 66
K
Sbjct: 215 VK 216
Score = 94 (38.1 bits), Expect = 0.00073, P = 0.00073
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 190 QCTIDKNRRKSCQACRLRKCYEVGMVKCG 218
>WB|WBGene00003605 [details] [associations]
symbol:nhr-6 species:6239 "Caenorhabditis elegans"
[GO:0043565 "sequence-specific DNA binding" evidence=IEA;IDA]
[GO:0003700 "sequence-specific DNA binding transcription factor
activity" evidence=IEA;IDA] [GO:0005634 "nucleus" evidence=IEA;IDA]
[GO:0003707 "steroid hormone receptor activity" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0043401 "steroid hormone mediated signaling
pathway" evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0030728 "ovulation" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0060278 "regulation of ovulation"
evidence=IMP] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0035211
"spermathecum morphogenesis" evidence=IMP] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005634
GO:GO:0009792 GO:GO:0002119 GO:GO:0030728 GO:GO:0046872
GO:GO:0043565 GO:GO:0003707 GO:GO:0008270 Gene3D:1.10.565.10
Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0045944 GO:GO:0003700
GO:GO:0006351 GO:GO:0035211 eggNOG:NOG245120 KO:K08558
GO:GO:0060278 EMBL:AF083224 EMBL:AF273770 EMBL:AY204167 EMBL:Z36237
EMBL:U13076 PIR:G88408 PIR:T43348 RefSeq:NP_497731.1
UniGene:Cel.19471 ProteinModelPortal:P41829 SMR:P41829
DIP:DIP-26405N IntAct:P41829 MINT:MINT-210819 STRING:P41829
EnsemblMetazoa:C48D5.1a GeneID:175462 KEGG:cel:CELE_C48D5.1
UCSC:C48D5.1 CTD:175462 WormBase:C48D5.1a
GeneTree:ENSGT00640000091364 HOGENOM:HOG000019029 InParanoid:P41829
OMA:GARTCEG NextBio:888258 ArrayExpress:P41829 Uniprot:P41829
Length = 619
Score = 109 (43.4 bits), Expect = 2.9e-05, P = 2.9e-05
Identities = 22/59 (37%), Positives = 33/59 (55%)
Query: 13 TCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGMNKDDAQH 71
TC+ G + +N C AG C +DK +R++CQ CR +KCL +GM K+ +H
Sbjct: 284 TCE-GCKGFFKRTVQKNSKYTC-AGNKTCPIDKRYRSRCQYCRYQKCLEVGMVKEIVRH 340
>WB|WBGene00003623 [details] [associations]
symbol:nhr-25 species:6239 "Caenorhabditis elegans"
[GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0003700
"sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043401 "steroid hormone mediated
signaling pathway" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0043565 "sequence-specific DNA binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0018991
"oviposition" evidence=IMP] [GO:0040011 "locomotion" evidence=IMP]
[GO:0019915 "lipid storage" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0002119 "nematode
larval development" evidence=IMP] [GO:0040018 "positive regulation
of multicellular organism growth" evidence=IMP] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0010171 "body
morphogenesis" evidence=IMP] [GO:0018996 "molting cycle, collagen
and cuticulin-based cuticle" evidence=IMP] [GO:0008406 "gonad
development" evidence=IMP] [GO:0040026 "positive regulation of
vulval development" evidence=IMP] [GO:0040039 "inductive cell
migration" evidence=IMP] [GO:0006915 "apoptotic process"
evidence=IMP] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0009792 GO:GO:0018991 GO:GO:0040010
GO:GO:0006915 GO:GO:0008406 GO:GO:0002119 GO:GO:0046872
GO:GO:0018996 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0010171
GO:GO:0040018 GO:GO:0003700 GO:GO:0006351 GO:GO:0019915
GO:GO:0040039 GO:GO:0040026 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 EMBL:AF179214 EMBL:AF179215
EMBL:AF179216 EMBL:Z54270 PIR:T20764 RefSeq:NP_001024550.1
RefSeq:NP_001024551.1 ProteinModelPortal:Q19345 SMR:Q19345
IntAct:Q19345 STRING:Q19345 PaxDb:Q19345 PRIDE:Q19345
EnsemblMetazoa:F11C1.6a GeneID:181432 KEGG:cel:CELE_F11C1.6
UCSC:F11C1.6b.2 CTD:181432 WormBase:F11C1.6a WormBase:F11C1.6b
HOGENOM:HOG000021002 InParanoid:Q19345 OMA:RPNHEGE NextBio:913918
InterPro:IPR016355 PIRSF:PIRSF002530 Uniprot:Q19345
Length = 572
Score = 96 (38.9 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ +C+ +R + +K + QC A C VD+ R +C +CR +KCL MGM
Sbjct: 29 HYGLLTCESCKGFFKRTVQNKK-QYQCSA----EANCHVDRTCRKRCPSCRFQKCLTMGM 83
Query: 65 NKD 67
+
Sbjct: 84 KME 86
Score = 34 (17.0 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 93 DKAHRNQCQACRL 105
D+AHR Q A R+
Sbjct: 107 DRAHRMQRNAMRV 119
>UNIPROTKB|Q19345 [details] [associations]
symbol:nhr-25 "Nuclear hormone receptor family member
nhr-25" species:6239 "Caenorhabditis elegans" [GO:0005515 "protein
binding" evidence=IPI] [GO:0070016 "armadillo repeat domain
binding" evidence=IPI] InterPro:IPR000536 InterPro:IPR001628
InterPro:IPR001723 InterPro:IPR008946 InterPro:IPR013088
Pfam:PF00104 Pfam:PF00105 PRINTS:PR00047 PRINTS:PR00398
PROSITE:PS00031 PROSITE:PS51030 SMART:SM00399 SMART:SM00430
GO:GO:0005634 GO:GO:0009792 GO:GO:0018991 GO:GO:0040010
GO:GO:0006915 GO:GO:0008406 GO:GO:0002119 GO:GO:0046872
GO:GO:0018996 GO:GO:0043565 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0010171
GO:GO:0040018 GO:GO:0003700 GO:GO:0006351 GO:GO:0019915
GO:GO:0040039 GO:GO:0040026 eggNOG:NOG240365
GeneTree:ENSGT00670000097927 EMBL:AF179214 EMBL:AF179215
EMBL:AF179216 EMBL:Z54270 PIR:T20764 RefSeq:NP_001024550.1
RefSeq:NP_001024551.1 ProteinModelPortal:Q19345 SMR:Q19345
IntAct:Q19345 STRING:Q19345 PaxDb:Q19345 PRIDE:Q19345
EnsemblMetazoa:F11C1.6a GeneID:181432 KEGG:cel:CELE_F11C1.6
UCSC:F11C1.6b.2 CTD:181432 WormBase:F11C1.6a WormBase:F11C1.6b
HOGENOM:HOG000021002 InParanoid:Q19345 OMA:RPNHEGE NextBio:913918
InterPro:IPR016355 PIRSF:PIRSF002530 Uniprot:Q19345
Length = 572
Score = 96 (38.9 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ +C+ +R + +K + QC A C VD+ R +C +CR +KCL MGM
Sbjct: 29 HYGLLTCESCKGFFKRTVQNKK-QYQCSA----EANCHVDRTCRKRCPSCRFQKCLTMGM 83
Query: 65 NKD 67
+
Sbjct: 84 KME 86
Score = 34 (17.0 bits), Expect = 2.9e-05, Sum P(2) = 2.9e-05
Identities = 7/13 (53%), Positives = 9/13 (69%)
Query: 93 DKAHRNQCQACRL 105
D+AHR Q A R+
Sbjct: 107 DRAHRMQRNAMRV 119
>UNIPROTKB|F1SRR6 [details] [associations]
symbol:ESR2 "Estrogen receptor beta" species:9823 "Sus
scrofa" [GO:0060766 "negative regulation of androgen receptor
signaling pathway" evidence=IEA] [GO:0060743 "epithelial cell
maturation involved in prostate gland development" evidence=IEA]
[GO:0060740 "prostate gland epithelium morphogenesis" evidence=IEA]
[GO:0060068 "vagina development" evidence=IEA] [GO:0060065 "uterus
development" evidence=IEA] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=IEA] [GO:0050680 "negative regulation of epithelial cell
proliferation" evidence=IEA] [GO:0043065 "positive regulation of
apoptotic process" evidence=IEA] [GO:0034056 "estrogen response
element binding" evidence=IEA] [GO:0030520 "intracellular estrogen
receptor signaling pathway" evidence=IEA] [GO:0019899 "enzyme
binding" evidence=IEA] [GO:0007420 "brain development"
evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA] [GO:0001764
"neuron migration" evidence=IEA] [GO:0001541 "ovarian follicle
development" evidence=IEA] [GO:0001046 "core promoter
sequence-specific DNA binding" evidence=IEA] [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005496 "steroid binding"
evidence=IEA] [GO:0003707 "steroid hormone receptor activity"
evidence=IEA] [GO:0003700 "sequence-specific DNA binding
transcription factor activity" evidence=IEA] InterPro:IPR000536
InterPro:IPR001628 InterPro:IPR001723 InterPro:IPR008946
InterPro:IPR013088 InterPro:IPR024178 Pfam:PF00104 Pfam:PF00105
PIRSF:PIRSF002527 PRINTS:PR00047 PRINTS:PR00398 PROSITE:PS00031
PROSITE:PS51030 SMART:SM00399 SMART:SM00430 GO:GO:0005739
GO:GO:0005634 GO:GO:0001764 GO:GO:0007420 GO:GO:0051091
GO:GO:0005496 GO:GO:0046872 GO:GO:0003707 GO:GO:0008270
Gene3D:1.10.565.10 Gene3D:3.30.50.10 SUPFAM:SSF48508 GO:GO:0003700
GO:GO:0006351 GO:GO:0000122 GO:GO:0043065 GO:GO:0001541
GO:GO:0050680 GO:GO:0060740 GeneTree:ENSGT00700000104072
GO:GO:0030520 GO:GO:0060068 GO:GO:0001046 GO:GO:0060766
GO:GO:0034056 GO:GO:0060065 OMA:LYAEPQK GO:GO:0060743
InterPro:IPR021064 Pfam:PF12497 EMBL:CU686778 EMBL:AEMK01180761
Ensembl:ENSSSCT00000005632 Uniprot:F1SRR6
Length = 526
Score = 108 (43.1 bits), Expect = 3.0e-05, P = 3.0e-05
Identities = 33/106 (31%), Positives = 50/106 (47%)
Query: 5 HDGMTDHPTCQAGTERCIVDKAHRNQCQACQAGTGRCIVDKAHRNQCQACRLKKCLNMGM 64
H G+ C+A +R I + H + C A T +C +DK R CQACRL+KC +GM
Sbjct: 157 HYGVWSCEGCKAFFKRSI--QGHNDYI--CPA-TNQCTIDKNRRKSCQACRLRKCYEVGM 211
Query: 65 NKDDAQHLKNSLLYEFACTNLV-ELRCIVDKAHRNQCQACRLKKCL 109
K ++ + N L C+ +A +N R+K+ L
Sbjct: 212 VKCGSRRERCGYRIVRKQRNSEGHLHCL-SRAKKNGDHTTRVKELL 256
Score = 94 (38.1 bits), Expect = 0.00096, P = 0.00096
Identities = 16/29 (55%), Positives = 20/29 (68%)
Query: 89 RCIVDKAHRNQCQACRLKKCLNMGMNKDG 117
+C +DK R CQACRL+KC +GM K G
Sbjct: 187 QCTIDKNRRKSCQACRLRKCYEVGMVKCG 215
WARNING: HSPs involving 293 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.326 0.133 0.442 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 120 120 0.00091 102 3 11 22 0.41 30
29 0.48 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 543
No. of states in DFA: 532 (57 KB)
Total size of DFA: 136 KB (2083 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:02
No. of threads or processors used: 24
Search cpu time: 12.29u 0.09s 12.38t Elapsed: 00:00:21
Total cpu time: 12.32u 0.09s 12.41t Elapsed: 00:00:23
Start: Thu Aug 15 14:04:08 2013 End: Thu Aug 15 14:04:31 2013
WARNINGS ISSUED: 2