Query psy13219
Match_columns 193
No_of_seqs 180 out of 1300
Neff 6.8
Searched_HMMs 29240
Date Fri Aug 16 23:11:23 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13219.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13219hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3sgz_A Hydroxyacid oxidase 2; 100.0 1.2E-54 4E-59 381.4 13.7 177 1-193 50-226 (352)
2 2nzl_A Hydroxyacid oxidase 1; 100.0 2.6E-43 8.8E-48 313.7 17.1 186 1-192 75-260 (392)
3 2nli_A Lactate oxidase; flavoe 100.0 3.7E-41 1.3E-45 297.5 15.6 177 1-192 61-237 (368)
4 1gox_A (S)-2-hydroxy-acid oxid 100.0 3E-39 1E-43 285.2 20.0 183 1-193 52-234 (370)
5 1p4c_A L(+)-mandelate dehydrog 100.0 2.4E-39 8.3E-44 286.9 18.1 181 1-192 53-233 (380)
6 1kbi_A Cytochrome B2, L-LCR; f 100.0 1.6E-39 5.5E-44 297.6 16.8 178 1-193 170-352 (511)
7 2qr6_A IMP dehydrogenase/GMP r 99.8 1.1E-20 3.7E-25 167.3 1.5 158 1-193 48-220 (393)
8 3sr7_A Isopentenyl-diphosphate 99.7 5.5E-17 1.9E-21 143.0 9.7 137 3-192 69-214 (365)
9 1vcf_A Isopentenyl-diphosphate 99.7 1.3E-17 4.3E-22 144.7 2.1 144 1-192 37-189 (332)
10 1p0k_A Isopentenyl-diphosphate 99.6 3.4E-16 1.2E-20 136.4 9.8 139 1-192 34-186 (349)
11 3r2g_A Inosine 5'-monophosphat 99.6 1.6E-15 5.6E-20 133.3 7.5 99 2-111 20-122 (361)
12 3vkj_A Isopentenyl-diphosphate 99.4 7.2E-13 2.5E-17 116.8 10.7 102 4-108 43-157 (368)
13 1ypf_A GMP reductase; GUAC, pu 99.2 2.7E-12 9.4E-17 111.4 1.4 129 2-192 28-157 (336)
14 1eep_A Inosine 5'-monophosphat 98.9 9.4E-11 3.2E-15 103.9 0.3 167 4-192 25-202 (404)
15 1gte_A Dihydropyrimidine dehyd 98.9 3.3E-09 1.1E-13 103.7 10.5 139 5-192 528-711 (1025)
16 2c6q_A GMP reductase 2; TIM ba 98.9 1.7E-09 5.8E-14 94.6 7.0 58 4-69 35-98 (351)
17 1vhn_A Putative flavin oxidore 98.3 9.1E-07 3.1E-11 75.8 7.3 124 18-192 2-137 (318)
18 2e6f_A Dihydroorotate dehydrog 98.3 3.5E-06 1.2E-10 71.6 10.2 98 8-112 2-135 (314)
19 1f76_A Dihydroorotate dehydrog 98.3 2.7E-06 9.3E-11 73.1 8.8 89 7-107 42-140 (336)
20 1jub_A Dihydroorotate dehydrog 98.0 4.5E-05 1.5E-09 64.6 11.1 96 10-112 2-133 (311)
21 1ep3_A Dihydroorotate dehydrog 98.0 1.3E-05 4.6E-10 67.5 7.4 100 5-111 2-137 (311)
22 1wv2_A Thiazole moeity, thiazo 97.5 0.00019 6.6E-09 60.2 6.2 86 73-191 102-194 (265)
23 3b0p_A TRNA-dihydrouridine syn 96.8 0.0038 1.3E-07 54.1 8.1 88 19-112 2-96 (350)
24 4ef8_A Dihydroorotate dehydrog 96.7 0.026 8.8E-07 49.1 12.6 102 4-112 31-168 (354)
25 3khj_A Inosine-5-monophosphate 96.4 0.0091 3.1E-07 52.0 7.8 88 5-106 29-124 (361)
26 3tjx_A Dihydroorotate dehydrog 95.6 0.023 7.9E-07 48.9 6.9 41 6-50 33-73 (354)
27 3oix_A Putative dihydroorotate 95.5 0.16 5.4E-06 43.9 11.6 98 8-112 36-168 (345)
28 1xm3_A Thiazole biosynthesis p 95.4 0.03 1E-06 46.4 6.6 21 172-192 166-187 (264)
29 4fo4_A Inosine 5'-monophosphat 94.5 0.083 2.8E-06 46.1 7.0 93 5-106 30-127 (366)
30 2z6i_A Trans-2-enoyl-ACP reduc 94.3 0.069 2.4E-06 45.5 6.1 87 12-110 6-99 (332)
31 2gjl_A Hypothetical protein PA 94.3 0.22 7.5E-06 42.1 9.1 89 12-110 9-107 (328)
32 3bw2_A 2-nitropropane dioxygen 90.2 0.76 2.6E-05 39.5 7.3 84 20-110 10-133 (369)
33 3bo9_A Putative nitroalkan dio 85.5 2.7 9.3E-05 35.5 7.7 84 18-110 24-113 (326)
34 1ea0_A Glutamate synthase [NAD 84.4 0.38 1.3E-05 48.8 2.2 54 6-66 841-894 (1479)
35 2w6r_A Imidazole glycerol phos 76.7 22 0.00074 28.3 9.9 18 172-189 188-205 (266)
36 3ks6_A Glycerophosphoryl diest 76.1 4.2 0.00014 32.8 5.4 74 36-110 116-215 (250)
37 3ffs_A Inosine-5-monophosphate 75.7 2.5 8.5E-05 37.2 4.2 55 6-68 27-82 (400)
38 1vyr_A Pentaerythritol tetrani 73.5 36 0.0012 29.0 11.0 47 10-56 7-56 (364)
39 1ofd_A Ferredoxin-dependent gl 73.2 1.2 4E-05 45.5 1.5 42 18-60 865-906 (1520)
40 3s5o_A 4-hydroxy-2-oxoglutarat 72.0 26 0.00089 29.1 9.5 86 21-107 19-117 (307)
41 2gou_A Oxidoreductase, FMN-bin 71.0 28 0.00094 29.7 9.7 46 11-56 8-56 (365)
42 2ehh_A DHDPS, dihydrodipicolin 69.3 20 0.0007 29.5 8.2 84 22-107 7-103 (294)
43 1x60_A Sporulation-specific N- 68.3 17 0.00058 23.5 6.2 35 71-105 6-40 (79)
44 3b0p_A TRNA-dihydrouridine syn 67.8 37 0.0013 28.7 9.7 21 86-106 144-164 (350)
45 1z41_A YQJM, probable NADH-dep 67.7 53 0.0018 27.4 10.9 23 169-191 262-284 (338)
46 3l21_A DHDPS, dihydrodipicolin 67.5 24 0.00081 29.3 8.3 86 21-107 20-118 (304)
47 2yxg_A DHDPS, dihydrodipicolin 67.5 20 0.00067 29.5 7.7 83 22-106 7-102 (289)
48 3fkr_A L-2-keto-3-deoxyarabona 67.4 24 0.00083 29.4 8.4 89 21-112 13-114 (309)
49 3dz1_A Dihydrodipicolinate syn 67.4 23 0.00078 29.6 8.2 85 21-106 13-109 (313)
50 1o5k_A DHDPS, dihydrodipicolin 66.9 17 0.00059 30.2 7.3 85 21-107 18-115 (306)
51 3b4u_A Dihydrodipicolinate syn 64.9 37 0.0013 27.9 9.0 85 22-107 9-106 (294)
52 2r91_A 2-keto-3-deoxy-(6-phosp 64.2 27 0.00092 28.7 7.9 85 22-112 5-101 (286)
53 3qze_A DHDPS, dihydrodipicolin 64.1 25 0.00086 29.4 7.8 86 21-107 28-126 (314)
54 1ka9_F Imidazole glycerol phos 64.0 21 0.00071 28.1 7.0 21 171-191 183-203 (252)
55 2v9d_A YAGE; dihydrodipicolini 63.8 35 0.0012 28.9 8.8 86 21-107 36-134 (343)
56 1jvn_A Glutamine, bifunctional 63.8 15 0.00051 33.3 6.7 32 75-106 437-472 (555)
57 1xky_A Dihydrodipicolinate syn 63.2 33 0.0011 28.4 8.4 85 22-107 18-115 (301)
58 2uva_G Fatty acid synthase bet 63.2 17 0.00057 38.4 7.7 89 13-109 578-678 (2060)
59 1nh8_A ATP phosphoribosyltrans 63.0 16 0.00055 30.9 6.3 61 46-106 227-297 (304)
60 3cpr_A Dihydrodipicolinate syn 62.6 36 0.0012 28.2 8.5 86 21-107 21-119 (304)
61 2jz7_A Selenium binding protei 62.6 7.2 0.00025 26.7 3.4 26 85-110 34-60 (81)
62 2wkj_A N-acetylneuraminate lya 61.2 37 0.0013 28.1 8.4 85 22-107 17-114 (303)
63 3m5v_A DHDPS, dihydrodipicolin 60.8 30 0.001 28.6 7.7 84 22-107 14-111 (301)
64 1f6k_A N-acetylneuraminate lya 60.5 36 0.0012 27.9 8.1 85 22-107 9-107 (293)
65 2r14_A Morphinone reductase; H 60.1 71 0.0024 27.3 10.1 20 172-191 287-306 (377)
66 1x60_A Sporulation-specific N- 59.9 20 0.00068 23.2 5.2 33 74-106 45-77 (79)
67 3h5d_A DHDPS, dihydrodipicolin 59.8 59 0.002 27.0 9.4 85 22-107 13-111 (311)
68 1vr4_A Hypothetical protein AP 59.7 8 0.00027 27.4 3.3 29 85-113 59-88 (103)
69 2l82_A Designed protein OR32; 59.4 9.2 0.00031 28.0 3.6 37 81-117 8-44 (162)
70 4dpp_A DHDPS 2, dihydrodipicol 59.1 45 0.0015 28.7 8.6 85 21-106 64-161 (360)
71 3glc_A Aldolase LSRF; TIM barr 58.1 48 0.0017 27.6 8.5 86 19-106 170-257 (295)
72 2nuw_A 2-keto-3-deoxygluconate 56.9 41 0.0014 27.6 7.8 86 22-112 5-102 (288)
73 2r8w_A AGR_C_1641P; APC7498, d 56.2 44 0.0015 28.1 8.0 85 22-107 40-137 (332)
74 3qkb_A Uncharacterized protein 56.2 10 0.00034 27.5 3.3 26 85-110 61-87 (111)
75 3l12_A Putative glycerophospho 55.9 13 0.00044 30.8 4.5 70 40-110 168-279 (313)
76 3daq_A DHDPS, dihydrodipicolin 55.4 37 0.0013 27.9 7.3 84 22-107 9-105 (292)
77 2q5c_A NTRC family transcripti 55.3 30 0.001 26.8 6.4 81 16-104 66-147 (196)
78 3e96_A Dihydrodipicolinate syn 54.6 59 0.002 27.0 8.5 88 21-112 16-117 (316)
79 3qfe_A Putative dihydrodipicol 53.8 41 0.0014 28.1 7.4 85 22-107 16-114 (318)
80 1thf_D HISF protein; thermophI 53.7 40 0.0014 26.4 7.1 22 170-191 181-202 (253)
81 3lmz_A Putative sugar isomeras 53.6 76 0.0026 24.6 8.8 89 17-106 14-109 (257)
82 1w3i_A EDA, 2-keto-3-deoxy glu 53.6 50 0.0017 27.1 7.8 86 22-112 5-102 (293)
83 3qvq_A Phosphodiesterase OLEI0 53.1 17 0.00058 29.1 4.7 58 52-110 145-221 (252)
84 3sho_A Transcriptional regulat 52.7 51 0.0017 24.3 7.2 61 48-108 63-123 (187)
85 2ojp_A DHDPS, dihydrodipicolin 52.5 35 0.0012 28.0 6.7 85 22-107 7-104 (292)
86 1y2i_A Hypothetical protein S0 51.6 11 0.00038 28.0 3.1 29 85-113 83-112 (133)
87 1jcn_A Inosine monophosphate d 51.5 9.3 0.00032 34.1 3.1 21 172-192 283-304 (514)
88 3eb2_A Putative dihydrodipicol 51.4 81 0.0028 25.9 8.8 87 21-108 9-108 (300)
89 3a5f_A Dihydrodipicolinate syn 50.5 80 0.0027 25.8 8.6 85 21-107 7-104 (291)
90 1zcc_A Glycerophosphodiester p 49.4 36 0.0012 27.0 6.2 71 40-110 115-205 (248)
91 3mz2_A Glycerophosphoryl diest 49.2 32 0.0011 28.3 6.0 70 41-110 146-239 (292)
92 1jub_A Dihydroorotate dehydrog 49.0 22 0.00076 29.1 4.9 35 72-106 158-192 (311)
93 1vr6_A Phospho-2-dehydro-3-deo 48.2 32 0.0011 29.5 5.9 42 27-69 148-189 (350)
94 3d0c_A Dihydrodipicolinate syn 47.2 93 0.0032 25.8 8.6 84 22-107 17-114 (314)
95 4ggj_A Mitochondrial cardiolip 46.7 33 0.0011 26.3 5.3 43 63-109 52-94 (196)
96 2pju_A Propionate catabolism o 46.7 27 0.00092 27.9 4.9 80 17-104 79-159 (225)
97 2oog_A Glycerophosphoryl diest 46.6 22 0.00076 28.9 4.5 72 38-110 149-252 (287)
98 3flu_A DHDPS, dihydrodipicolin 46.5 1.1E+02 0.0036 25.1 8.8 85 22-107 13-110 (297)
99 1m65_A Hypothetical protein YC 46.5 13 0.00045 29.0 3.0 23 88-110 20-42 (245)
100 3l5l_A Xenobiotic reductase A; 46.4 1.3E+02 0.0043 25.4 9.4 43 65-107 217-267 (363)
101 2yxo_A Histidinol phosphatase; 45.7 15 0.00052 29.0 3.3 24 88-111 18-41 (267)
102 4gel_A Mitochondrial cardiolip 45.3 31 0.0011 26.5 5.0 36 73-110 72-107 (220)
103 2vd3_A ATP phosphoribosyltrans 45.1 43 0.0015 28.0 6.1 62 45-106 210-282 (289)
104 1qo2_A Molecule: N-((5-phospho 44.7 40 0.0014 26.3 5.7 22 170-191 174-195 (241)
105 2w6r_A Imidazole glycerol phos 44.6 57 0.002 25.7 6.7 19 88-106 32-50 (266)
106 3na8_A Putative dihydrodipicol 44.2 1.1E+02 0.0037 25.4 8.5 86 21-107 29-127 (315)
107 2h9a_B CO dehydrogenase/acetyl 44.2 26 0.00088 29.6 4.6 76 35-113 132-214 (310)
108 2vc6_A MOSA, dihydrodipicolina 44.1 1E+02 0.0035 25.1 8.3 84 22-107 7-103 (292)
109 1vd6_A Glycerophosphoryl diest 44.1 31 0.001 26.9 4.8 69 40-110 113-197 (224)
110 1vs1_A 3-deoxy-7-phosphoheptul 43.9 43 0.0015 27.6 5.8 46 29-79 82-127 (276)
111 1tv5_A Dhodehase, dihydroorota 43.8 60 0.002 28.7 7.1 41 73-113 180-223 (443)
112 3qja_A IGPS, indole-3-glycerol 43.4 44 0.0015 27.3 5.9 76 19-106 112-189 (272)
113 3si9_A DHDPS, dihydrodipicolin 43.2 1.3E+02 0.0044 25.0 8.8 86 21-107 27-125 (315)
114 3h4q_A Putative acetyltransfer 43.0 32 0.0011 24.6 4.5 47 77-123 109-160 (188)
115 2pz0_A Glycerophosphoryl diest 42.9 20 0.00068 28.6 3.6 71 39-110 131-222 (252)
116 3zwt_A Dihydroorotate dehydrog 42.5 12 0.00041 32.3 2.3 23 5-27 45-67 (367)
117 1ur4_A Galactanase; hydrolase, 41.5 38 0.0013 29.5 5.4 82 21-104 10-107 (399)
118 3tak_A DHDPS, dihydrodipicolin 41.4 1.1E+02 0.0039 24.8 8.1 85 22-107 7-104 (291)
119 3gr7_A NADPH dehydrogenase; fl 41.4 1.6E+02 0.0053 24.7 9.3 41 65-106 203-249 (340)
120 2rfg_A Dihydrodipicolinate syn 41.2 1E+02 0.0034 25.3 7.8 84 22-107 7-103 (297)
121 3ch0_A Glycerophosphodiester p 41.1 20 0.00068 28.8 3.3 70 40-110 156-247 (272)
122 2fli_A Ribulose-phosphate 3-ep 40.5 63 0.0022 24.6 6.1 20 91-110 76-95 (220)
123 3viv_A 441AA long hypothetical 40.4 27 0.00092 28.1 4.0 26 86-111 25-50 (230)
124 3rjz_A N-type ATP pyrophosphat 40.1 27 0.00091 28.3 3.9 25 89-113 129-153 (237)
125 1fob_A Beta-1,4-galactanase; B 39.9 60 0.0021 27.1 6.3 60 45-107 14-80 (334)
126 3nk6_A 23S rRNA methyltransfer 39.7 91 0.0031 25.5 7.3 56 49-107 97-152 (277)
127 3qat_A Malonyl COA-acyl carrie 38.9 1.1E+02 0.0039 25.1 7.8 37 78-114 172-209 (318)
128 3nvt_A 3-deoxy-D-arabino-heptu 38.7 41 0.0014 29.2 5.1 36 40-79 196-231 (385)
129 3ezo_A Malonyl COA-acyl carrie 38.7 62 0.0021 26.8 6.1 37 78-114 172-209 (318)
130 3ado_A Lambda-crystallin; L-gu 38.7 77 0.0026 26.6 6.7 62 54-115 119-197 (319)
131 3zen_D Fatty acid synthase; tr 38.2 53 0.0018 36.1 6.8 91 12-110 422-527 (3089)
132 1ps9_A 2,4-dienoyl-COA reducta 38.1 2.3E+02 0.0078 25.6 10.5 21 10-30 7-27 (671)
133 2wje_A CPS4B, tyrosine-protein 38.0 18 0.00061 28.7 2.6 27 84-110 22-48 (247)
134 2uv8_G Fatty acid synthase sub 37.7 79 0.0027 33.4 7.8 87 12-108 584-682 (2051)
135 1uta_A FTSN, MSGA, cell divisi 37.4 32 0.0011 22.5 3.4 35 71-105 6-40 (81)
136 3can_A Pyruvate-formate lyase- 37.2 1.2E+02 0.0041 22.2 7.8 82 28-110 10-103 (182)
137 3p6l_A Sugar phosphate isomera 37.1 59 0.002 25.2 5.5 29 78-106 83-111 (262)
138 3obe_A Sugar phosphate isomera 37.0 9.5 0.00033 31.2 0.8 35 74-108 22-58 (305)
139 1z4e_A Transcriptional regulat 36.5 33 0.0011 23.7 3.6 33 78-110 90-129 (153)
140 3t9y_A Acetyltransferase, GNAT 36.4 37 0.0013 22.9 3.8 38 86-123 100-139 (150)
141 3jvn_A Acetyltransferase; alph 36.3 34 0.0012 23.6 3.7 39 85-123 107-145 (166)
142 2e6f_A Dihydroorotate dehydrog 36.3 38 0.0013 27.7 4.4 42 64-106 153-195 (314)
143 2anu_A Hypothetical protein TM 36.0 26 0.0009 27.8 3.3 20 88-107 37-56 (255)
144 2zsk_A PH1733, 226AA long hypo 35.8 26 0.00088 27.4 3.1 39 87-127 61-99 (226)
145 1rpx_A Protein (ribulose-phosp 35.7 1.5E+02 0.0051 22.8 7.7 41 63-108 60-100 (230)
146 2ha8_A TAR (HIV-1) RNA loop bi 35.6 35 0.0012 26.1 3.8 78 30-108 31-109 (184)
147 1y0e_A Putative N-acetylmannos 35.4 24 0.00082 27.2 2.9 25 82-106 19-43 (223)
148 3ojc_A Putative aspartate/glut 34.4 20 0.00069 28.5 2.3 40 86-127 63-102 (231)
149 1mzh_A Deoxyribose-phosphate a 34.2 1.7E+02 0.0056 22.9 7.8 38 64-103 109-149 (225)
150 2otd_A Glycerophosphodiester p 34.2 50 0.0017 26.0 4.7 58 52-110 142-218 (247)
151 3k89_A Malonyl COA-ACP transac 33.7 91 0.0031 25.6 6.4 37 78-114 168-205 (314)
152 1f76_A Dihydroorotate dehydrog 33.7 42 0.0014 27.9 4.3 36 72-107 211-246 (336)
153 4evy_A Aminoglycoside N(6')-ac 33.5 35 0.0012 24.0 3.4 33 78-110 100-139 (166)
154 2lci_A Protein OR36; structura 32.6 76 0.0026 22.4 4.8 31 79-109 55-85 (134)
155 2yb1_A Amidohydrolase; HET: AM 32.6 26 0.00088 28.7 2.7 28 88-115 19-46 (292)
156 1bo4_A Protein (serratia marce 32.4 45 0.0016 22.9 3.8 25 86-110 125-149 (168)
157 3noy_A 4-hydroxy-3-methylbut-2 32.3 36 0.0012 29.5 3.7 82 41-133 124-213 (366)
158 2y88_A Phosphoribosyl isomeras 32.3 1.1E+02 0.0037 23.6 6.4 19 88-106 151-169 (244)
159 1o94_A Tmadh, trimethylamine d 32.3 2.8E+02 0.0094 25.5 10.0 22 170-191 277-298 (729)
160 4djd_D C/Fe-SP, corrinoid/iron 32.0 36 0.0012 28.9 3.6 88 19-115 128-223 (323)
161 1o1z_A GDPD, glycerophosphodie 32.0 1.3E+02 0.0044 23.5 6.8 22 89-110 188-209 (234)
162 3l23_A Sugar phosphate isomera 31.9 13 0.00045 30.3 0.8 20 89-108 62-81 (303)
163 1f6y_A 5-methyltetrahydrofolat 31.4 85 0.0029 25.4 5.7 23 86-108 138-162 (262)
164 3qy7_A Tyrosine-protein phosph 31.4 34 0.0011 27.8 3.2 26 84-109 18-43 (262)
165 1aj0_A DHPS, dihydropteroate s 31.3 1E+02 0.0035 25.4 6.2 27 85-114 162-190 (282)
166 3lod_A Putative acyl-COA N-acy 31.2 36 0.0012 23.4 3.0 46 78-123 79-131 (162)
167 3g8w_A Lactococcal prophage PS 31.2 42 0.0014 23.3 3.4 38 86-123 101-138 (169)
168 2hmc_A AGR_L_411P, dihydrodipi 31.2 1.4E+02 0.0048 25.1 7.2 85 22-107 32-126 (344)
169 2g0w_A LMO2234 protein; putati 31.1 1.5E+02 0.0051 23.5 7.2 94 12-105 14-124 (296)
170 1vkc_A Putative acetyl transfe 30.9 51 0.0018 22.8 3.9 46 78-124 96-148 (158)
171 3no3_A Glycerophosphodiester p 30.8 70 0.0024 25.2 5.0 70 40-110 118-207 (238)
172 1hjs_A Beta-1,4-galactanase; 4 30.7 1.4E+02 0.0047 24.9 7.0 59 44-104 13-78 (332)
173 1xx1_A Smase I, sphingomyelina 30.7 28 0.00097 28.0 2.7 25 86-110 209-235 (285)
174 3n8h_A Pantothenate synthetase 30.6 1.3E+02 0.0046 24.7 6.7 67 21-105 24-94 (264)
175 2yva_A DNAA initiator-associat 30.6 92 0.0032 23.1 5.5 36 73-108 110-145 (196)
176 3f8k_A Protein acetyltransfera 30.4 42 0.0014 23.1 3.3 46 78-123 78-130 (160)
177 2cxh_A Probable BRIX-domain ri 30.4 33 0.0011 27.4 2.9 68 34-106 19-90 (217)
178 4djd_C C/Fe-SP, corrinoid/iron 30.3 72 0.0025 28.3 5.3 25 84-108 210-234 (446)
179 1u6m_A Acetyltransferase, GNAT 30.2 30 0.001 25.4 2.6 46 78-123 117-169 (199)
180 2cu0_A Inosine-5'-monophosphat 30.2 23 0.00079 31.3 2.2 25 5-29 31-56 (486)
181 3s81_A Putative aspartate race 30.1 26 0.0009 28.6 2.4 39 86-126 86-124 (268)
182 1s3z_A Aminoglycoside 6'-N-ace 30.1 45 0.0016 23.1 3.4 25 86-110 115-139 (165)
183 3sz8_A 2-dehydro-3-deoxyphosph 30.0 90 0.0031 25.9 5.6 47 29-79 70-116 (285)
184 3igs_A N-acetylmannosamine-6-p 29.9 86 0.003 24.8 5.4 64 36-105 35-107 (232)
185 2o55_A Putative glycerophospho 29.7 94 0.0032 24.5 5.6 69 38-107 127-220 (258)
186 2cy2_A TTHA1209, probable acet 29.6 46 0.0016 22.8 3.4 49 75-123 89-145 (174)
187 1jfl_A Aspartate racemase; alp 29.5 31 0.001 27.0 2.6 40 86-127 61-100 (228)
188 3fyn_A Integron gene cassette 29.5 44 0.0015 23.5 3.3 40 85-124 119-158 (176)
189 3qvl_A Putative hydantoin race 29.4 39 0.0013 27.1 3.2 35 89-126 59-93 (245)
190 1z41_A YQJM, probable NADH-dep 29.2 2.4E+02 0.0083 23.3 9.9 43 64-107 202-250 (338)
191 1tk9_A Phosphoheptose isomeras 29.1 1.1E+02 0.0038 22.4 5.7 36 73-108 111-146 (188)
192 1vzw_A Phosphoribosyl isomeras 28.8 1.2E+02 0.0041 23.5 6.0 22 170-191 176-197 (244)
193 4fnq_A Alpha-galactosidase AGA 28.8 18 0.00061 34.0 1.2 42 76-119 336-377 (729)
194 4e0a_A BH1408 protein; structu 28.7 48 0.0017 22.5 3.4 26 85-110 107-132 (164)
195 2h1y_A Malonyl coenzyme A-acyl 28.4 97 0.0033 25.7 5.7 37 78-114 175-212 (321)
196 2fiq_A Putative tagatose 6-pho 28.3 2.4E+02 0.0083 24.7 8.4 76 33-108 21-126 (420)
197 1vm6_A DHPR, dihydrodipicolina 28.3 84 0.0029 25.3 5.0 71 32-105 59-136 (228)
198 3d8p_A Acetyltransferase of GN 28.2 52 0.0018 22.4 3.4 47 77-123 82-135 (163)
199 2z6i_A Trans-2-enoyl-ACP reduc 28.1 2.5E+02 0.0085 23.0 9.5 21 171-191 149-169 (332)
200 2dxq_A AGR_C_4057P, acetyltran 28.1 52 0.0018 22.8 3.5 25 86-110 101-125 (150)
201 2dqw_A Dihydropteroate synthas 27.9 66 0.0022 26.8 4.5 21 86-106 177-197 (294)
202 2j8m_A Acetyltransferase PA486 27.8 50 0.0017 23.3 3.4 34 77-110 86-126 (172)
203 2z0r_A Putative uncharacterize 27.5 94 0.0032 22.0 4.5 44 64-109 40-83 (103)
204 1gvf_A Tagatose-bisphosphate a 27.3 52 0.0018 27.4 3.7 62 40-106 32-104 (286)
205 2y5s_A DHPS, dihydropteroate s 27.2 87 0.003 26.0 5.1 22 85-106 170-193 (294)
206 2isw_A Putative fructose-1,6-b 27.2 55 0.0019 27.8 3.9 24 168-191 186-211 (323)
207 2r1i_A GCN5-related N-acetyltr 27.0 55 0.0019 22.6 3.4 24 87-110 118-141 (172)
208 3td9_A Branched chain amino ac 27.0 92 0.0031 25.1 5.2 61 39-106 94-155 (366)
209 3h6g_A Glutamate receptor, ion 26.8 1.6E+02 0.0056 23.9 6.9 64 40-110 85-148 (395)
210 3dr6_A YNCA; acetyltransferase 26.8 55 0.0019 22.4 3.4 47 77-123 86-139 (174)
211 1x92_A APC5045, phosphoheptose 26.7 1.2E+02 0.004 22.6 5.5 35 74-108 115-149 (199)
212 3i3g_A N-acetyltransferase; ma 26.6 79 0.0027 21.6 4.2 33 78-110 101-140 (161)
213 1vyr_A Pentaerythritol tetrani 26.4 2.9E+02 0.0099 23.2 8.9 44 63-106 218-271 (364)
214 1yy3_A S-adenosylmethionine:tR 26.1 81 0.0028 27.1 4.7 47 54-106 211-257 (346)
215 1mk4_A Hypothetical protein YQ 26.0 53 0.0018 22.3 3.1 46 78-123 73-125 (157)
216 1z69_A COG2141, coenzyme F420- 25.9 55 0.0019 26.7 3.6 24 83-106 11-34 (327)
217 3irs_A Uncharacterized protein 25.8 2.5E+02 0.0086 22.3 8.0 68 42-109 52-128 (291)
218 1zco_A 2-dehydro-3-deoxyphosph 25.8 89 0.003 25.4 4.8 42 27-69 65-106 (262)
219 1f07_A Coenzyme F420-dependent 25.7 66 0.0022 26.2 4.1 24 83-106 11-34 (321)
220 3n0w_A ABC branched chain amin 25.6 1.2E+02 0.0042 24.5 5.8 62 40-106 87-148 (379)
221 2l69_A Rossmann 2X3 fold prote 25.6 1.4E+02 0.0049 20.9 5.2 47 61-110 40-86 (134)
222 1i4n_A Indole-3-glycerol phosp 25.5 1.5E+02 0.0052 23.9 6.2 77 19-107 100-179 (251)
223 3trj_A Phosphoheptose isomeras 25.5 1.2E+02 0.0043 22.9 5.5 35 74-108 116-150 (201)
224 2pdo_A Acetyltransferase YPEA; 25.5 61 0.0021 22.2 3.4 34 77-110 73-113 (144)
225 2eq5_A 228AA long hypothetical 25.4 64 0.0022 24.9 3.8 34 90-126 66-99 (228)
226 2b5g_A Diamine acetyltransfera 25.4 54 0.0019 22.7 3.1 25 86-110 108-132 (171)
227 3i09_A Periplasmic branched-ch 25.3 1.4E+02 0.0047 24.1 6.0 62 40-106 85-146 (375)
228 2aam_A Hypothetical protein TM 25.3 48 0.0016 27.8 3.2 25 86-110 122-147 (309)
229 3o0f_A Putative metal-dependen 25.3 46 0.0016 27.8 3.0 29 88-116 30-58 (301)
230 2cnt_A Modification of 30S rib 25.3 55 0.0019 22.8 3.2 38 86-123 83-120 (160)
231 1tx2_A DHPS, dihydropteroate s 25.2 63 0.0021 26.9 3.9 21 86-106 182-204 (297)
232 3q58_A N-acetylmannosamine-6-p 25.0 88 0.003 24.7 4.6 67 33-105 32-107 (229)
233 3dcp_A Histidinol-phosphatase; 24.9 52 0.0018 26.9 3.3 25 87-111 19-43 (283)
234 3g8r_A Probable spore coat pol 24.9 46 0.0016 28.6 3.0 29 40-69 125-153 (350)
235 2rbg_A Putative uncharacterize 24.9 74 0.0025 23.1 3.6 34 75-109 63-96 (126)
236 1ezw_A Coenzyme F420-dependent 24.8 63 0.0021 26.8 3.8 24 83-106 14-37 (349)
237 3q12_A Pantoate--beta-alanine 24.8 2E+02 0.0069 23.9 6.9 66 22-105 26-95 (287)
238 3sg0_A Extracellular ligand-bi 24.8 84 0.0029 25.3 4.6 63 40-106 103-165 (386)
239 3h5l_A Putative branched-chain 24.7 1.8E+02 0.0061 24.0 6.7 72 41-114 98-178 (419)
240 3c8n_A Probable F420-dependent 24.5 60 0.002 27.0 3.6 25 84-109 36-60 (356)
241 2hsa_B 12-oxophytodienoate red 24.3 3.3E+02 0.011 23.2 11.6 20 172-191 307-326 (402)
242 1dih_A Dihydrodipicolinate red 24.3 1.1E+02 0.0038 24.7 5.2 76 33-111 79-168 (273)
243 1i12_A Glucosamine-phosphate N 24.3 84 0.0029 22.0 4.0 31 79-109 101-138 (160)
244 2eui_A Probable acetyltransfer 24.2 52 0.0018 22.0 2.8 46 78-123 83-135 (153)
245 4h89_A GCN5-related N-acetyltr 24.2 80 0.0027 22.5 3.9 31 76-106 91-128 (173)
246 1gz0_A Hypothetical tRNA/RRNA 24.1 2.7E+02 0.0093 22.1 7.6 47 62-109 94-140 (253)
247 2wqp_A Polysialic acid capsule 24.1 49 0.0017 28.4 3.0 29 40-69 138-166 (349)
248 2fe7_A Probable N-acetyltransf 24.0 66 0.0023 21.9 3.4 25 86-110 108-132 (166)
249 1vky_A S-adenosylmethionine:tR 24.0 71 0.0024 27.4 4.0 47 54-106 214-260 (347)
250 1vli_A Spore coat polysacchari 24.0 48 0.0017 28.8 3.0 29 40-69 148-176 (385)
251 3ij6_A Uncharacterized metal-d 24.0 2.2E+02 0.0074 23.1 7.0 14 88-101 144-157 (312)
252 2xbl_A Phosphoheptose isomeras 23.9 1.5E+02 0.0053 21.7 5.7 35 74-108 118-152 (198)
253 3lop_A Substrate binding perip 23.8 71 0.0024 25.8 3.9 59 41-107 88-148 (364)
254 3tr9_A Dihydropteroate synthas 23.8 58 0.002 27.5 3.4 65 40-106 115-199 (314)
255 3dsb_A Putative acetyltransfer 23.7 83 0.0028 21.0 3.8 39 85-123 103-142 (157)
256 1yx1_A Hypothetical protein PA 23.7 2.5E+02 0.0086 21.6 7.4 69 40-110 87-165 (264)
257 4fgs_A Probable dehydrogenase 23.6 1.1E+02 0.0038 24.8 5.1 67 39-106 42-110 (273)
258 4eyg_A Twin-arginine transloca 23.6 99 0.0034 24.8 4.8 18 40-57 86-103 (368)
259 1rhc_A F420-dependent alcohol 23.5 59 0.002 26.6 3.4 23 84-106 15-37 (330)
260 1yr0_A AGR_C_1654P, phosphinot 23.5 59 0.002 23.0 3.0 33 78-110 88-127 (175)
261 2yci_X 5-methyltetrahydrofolat 23.4 1.5E+02 0.0051 24.1 5.8 24 85-108 146-171 (271)
262 3i65_A Dihydroorotate dehydrog 23.4 39 0.0013 29.7 2.3 25 3-27 77-101 (415)
263 1b73_A Glutamate racemase; iso 23.4 40 0.0014 26.9 2.3 37 88-126 51-88 (254)
264 3gg7_A Uncharacterized metallo 23.2 39 0.0013 27.3 2.2 21 89-109 17-37 (254)
265 1qsm_A HPA2 histone acetyltran 23.2 78 0.0027 21.1 3.6 36 75-110 84-127 (152)
266 3eo4_A Uncharacterized protein 23.2 70 0.0024 22.1 3.4 39 85-123 109-147 (164)
267 2q7b_A Acetyltransferase, GNAT 23.2 69 0.0024 22.9 3.4 38 86-123 117-154 (181)
268 2ge3_A Probable acetyltransfer 23.0 57 0.002 22.8 2.9 35 76-110 88-129 (170)
269 1rvg_A Fructose-1,6-bisphospha 23.0 65 0.0022 27.1 3.5 61 40-106 31-102 (305)
270 4ag7_A Glucosamine-6-phosphate 23.0 70 0.0024 21.9 3.3 24 86-109 120-143 (165)
271 1h1y_A D-ribulose-5-phosphate 23.0 1.2E+02 0.0041 23.5 5.0 23 90-112 78-100 (228)
272 2dvt_A Thermophilic reversible 22.9 1.6E+02 0.0054 23.4 5.9 47 63-109 84-131 (327)
273 2xhz_A KDSD, YRBH, arabinose 5 22.9 1.7E+02 0.0059 21.2 5.7 35 74-108 98-132 (183)
274 3nav_A Tryptophan synthase alp 22.8 61 0.0021 26.6 3.3 48 63-111 88-136 (271)
275 3ipc_A ABC transporter, substr 22.7 1.2E+02 0.0039 24.3 5.0 62 40-107 83-145 (356)
276 3nk6_A 23S rRNA methyltransfer 22.6 1.2E+02 0.0041 24.7 5.1 74 31-109 125-202 (277)
277 2ae6_A Acetyltransferase, GNAT 22.6 64 0.0022 22.7 3.1 35 76-110 84-125 (166)
278 2fia_A Acetyltransferase; stru 22.6 65 0.0022 21.8 3.0 38 86-123 95-132 (162)
279 3fix_A N-acetyltransferase; te 22.5 64 0.0022 22.9 3.1 33 78-110 115-154 (183)
280 1ufh_A YYCN protein; alpha and 22.4 73 0.0025 22.4 3.4 39 86-124 132-170 (180)
281 2i2w_A Phosphoheptose isomeras 22.4 1.5E+02 0.0051 22.5 5.4 35 74-108 133-167 (212)
282 2bei_A Diamine acetyltransfera 22.3 91 0.0031 22.1 3.9 33 78-110 93-132 (170)
283 4af0_A Inosine-5'-monophosphat 22.3 1.1E+02 0.0038 28.0 5.1 93 6-109 77-178 (556)
284 1vrd_A Inosine-5'-monophosphat 22.2 44 0.0015 29.4 2.4 21 172-192 265-286 (494)
285 3mxt_A Pantothenate synthetase 22.1 1.2E+02 0.004 25.3 4.9 69 22-105 26-94 (285)
286 3pp9_A Putative streptothricin 22.0 74 0.0025 22.6 3.4 33 78-110 105-144 (187)
287 2i6c_A Putative acetyltransfer 22.0 70 0.0024 21.6 3.1 38 86-123 95-133 (160)
288 1tiq_A Protease synthase and s 22.0 95 0.0033 22.2 4.0 32 78-109 95-133 (180)
289 1m3u_A 3-methyl-2-oxobutanoate 21.9 2.6E+02 0.0089 22.8 7.0 26 82-107 154-182 (264)
290 3n9r_A Fructose-bisphosphate a 21.8 63 0.0021 27.2 3.2 24 168-191 188-211 (307)
291 2oh1_A Acetyltransferase, GNAT 21.6 78 0.0027 22.0 3.4 33 77-109 107-146 (179)
292 1h3d_A ATP-phosphoribosyltrans 21.6 57 0.0019 27.4 2.9 58 49-106 224-292 (299)
293 1tv5_A Dhodehase, dihydroorota 21.5 1.2E+02 0.004 26.8 5.0 36 73-108 297-333 (443)
294 3tml_A 2-dehydro-3-deoxyphosph 21.5 1.3E+02 0.0044 25.0 5.0 41 29-69 67-107 (288)
295 1eye_A DHPS 1, dihydropteroate 21.3 80 0.0027 26.0 3.7 23 85-107 154-178 (280)
296 3hgj_A Chromate reductase; TIM 21.3 3.5E+02 0.012 22.4 9.5 44 64-107 210-260 (349)
297 2nv1_A Pyridoxal biosynthesis 21.2 2E+02 0.007 23.3 6.3 17 90-106 32-49 (305)
298 3fs2_A 2-dehydro-3-deoxyphosph 21.2 97 0.0033 25.9 4.2 47 29-79 91-137 (298)
299 1on0_A YYCN protein; structura 21.1 72 0.0025 22.3 3.1 48 77-124 92-146 (158)
300 1wdi_A Hypothetical protein TT 21.1 1.1E+02 0.0038 26.2 4.7 46 54-106 212-257 (345)
301 3i45_A Twin-arginine transloca 21.1 1.1E+02 0.0037 25.0 4.6 18 40-57 87-104 (387)
302 2x7b_A N-acetyltransferase SSO 21.0 81 0.0028 22.2 3.4 34 77-110 91-132 (168)
303 1viz_A PCRB protein homolog; s 21.0 55 0.0019 26.4 2.6 25 83-107 17-41 (240)
304 3mog_A Probable 3-hydroxybutyr 21.0 2.4E+02 0.0082 24.8 7.0 55 55-110 117-187 (483)
305 2nwr_A 2-dehydro-3-deoxyphosph 21.0 1.5E+02 0.0052 24.2 5.3 48 29-80 54-101 (267)
306 3tt2_A GCN5-related N-acetyltr 21.0 1E+02 0.0035 24.0 4.2 39 85-123 265-304 (330)
307 1o60_A 2-dehydro-3-deoxyphosph 20.6 1.7E+02 0.0059 24.1 5.7 61 36-102 75-135 (292)
308 1v2x_A TRNA (GM18) methyltrans 20.6 45 0.0015 25.7 1.9 63 41-106 38-100 (194)
309 1xx6_A Thymidine kinase; NESG, 20.6 99 0.0034 23.6 4.0 35 75-109 8-48 (191)
310 1nqk_A Alkanesulfonate monooxy 20.5 76 0.0026 26.8 3.5 24 83-106 27-50 (381)
311 3c8f_A Pyruvate formate-lyase 20.5 2.7E+02 0.0092 20.7 7.1 72 29-104 77-165 (245)
312 4f3y_A DHPR, dihydrodipicolina 20.4 1.5E+02 0.0051 24.1 5.2 70 33-105 80-157 (272)
313 1ydn_A Hydroxymethylglutaryl-C 20.4 1.8E+02 0.0061 23.5 5.7 28 83-111 152-179 (295)
314 3zwt_A Dihydroorotate dehydrog 20.3 1.2E+02 0.0041 25.8 4.8 34 73-106 221-254 (367)
315 3jx9_A Putative phosphoheptose 20.3 2.8E+02 0.0097 20.9 7.9 83 40-122 29-129 (170)
316 2g3a_A Acetyltransferase; stru 20.2 1.2E+02 0.0039 20.6 4.0 31 78-108 80-117 (152)
317 2i7g_A Monooxygenase, AGR_C_41 20.2 73 0.0025 26.8 3.4 24 86-110 49-72 (376)
No 1
>3sgz_A Hydroxyacid oxidase 2; flavoprotein, homology, INH oxidoreductase-oxidoreductase inhibitor complex; HET: FMN HO6; 1.35A {Rattus norvegicus} PDB: 1tb3_A*
Probab=100.00 E-value=1.2e-54 Score=381.39 Aligned_cols=177 Identities=36% Similarity=0.559 Sum_probs=157.0
Q ss_pred CCcCCCCCCCcceECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEEE
Q psy13219 1 MMRNVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMY 80 (193)
Q Consensus 1 vL~dv~~~d~~t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY 80 (193)
||+||+++||+|+|||+++++||+|||+|+++|+||+||+++||||+++|++|++||+|++|+|||+++.+++++|||||
T Consensus 50 vl~dv~~~d~~t~llG~~~~~P~~iaP~g~~~l~~~~ge~~~araa~~~gi~~~lSt~ss~s~e~v~~~~~~~~~wfQlY 129 (352)
T 3sgz_A 50 YLRDMSKVDTRTTIQGQEISAPICISPTAFHSIAWPDGEKSTARAAQEANICYVISSYASYSLEDIVAAAPEGFRWFQLY 129 (352)
T ss_dssp CSSCCSSCBCCEEETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHSTTCEEEEECC
T ss_pred ccCCCCCCCCceEECCcccCCcceechHHHHHhcCccHHHHHHHHHHHcCCCeEeCCCCCCCHHHHHHhccCccceeccc
Confidence 79999999999999999999999999999999999999999999999999999999999999999999988889999999
Q ss_pred eecCHHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCCCCCccchhhhhccccCcccchhhcccccccCCcchh
Q psy13219 81 IFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFTMPPYLSLANFRNLKQHNEDISKFRDISAEECSSGLT 160 (193)
Q Consensus 81 ~~~dr~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (193)
+++||+.++++|+|||+|||+|||||||+|+.|+||+|+||+|++|++++++++.+.... .+..+.
T Consensus 130 ~~~d~~~~~~l~~ra~~aG~~alvlTvD~p~~g~R~~d~r~~~~~p~~~~~~~~~~~~~~-------------~~~~~~- 195 (352)
T 3sgz_A 130 MKSDWDFNKQMVQRAEALGFKALVITIDTPVLGNRRRDKRNQLNLEANILKAALRALKEE-------------KPTQSV- 195 (352)
T ss_dssp CCSCHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHHHHSCHHHHTTCC--------------------------
T ss_pred cCCCHHHHHHHHHHHHHcCCCEEEEEeCCCCCCcchhhhhcCCCCCcccchhhhcccccc-------------cccchh-
Confidence 999999999999999999999999999999999999999999999988888776542100 001111
Q ss_pred hHhhhhCCCCCCHHHHHHHHhcCCCCEEEecCC
Q psy13219 161 DYVANQFDDSVDWDDVRSLVQATKLPIVCKGIP 193 (193)
Q Consensus 161 ~~~~~~~~~~~tW~di~wlr~~~~lPivlKGI~ 193 (193)
....++++++|++|+|||+.|++||++|||.
T Consensus 196 --~~~~~d~~~~w~~i~~lr~~~~~PvivK~v~ 226 (352)
T 3sgz_A 196 --PVLFPKASFCWNDLSLLQSITRLPIILKGIL 226 (352)
T ss_dssp -----CCCTTCCHHHHHHHHHHCCSCEEEEEEC
T ss_pred --hhhccCCCCCHHHHHHHHHhcCCCEEEEecC
Confidence 1256799999999999999999999999973
No 2
>2nzl_A Hydroxyacid oxidase 1; HAOX1, glycolate oxidase, GOX, GOX1, structural genomics, structural genom consortium, SGC, oxidoreductase; HET: FMN; 1.35A {Homo sapiens} PDB: 2rdu_A* 2rdt_A* 2rdw_A* 2w0u_A*
Probab=100.00 E-value=2.6e-43 Score=313.66 Aligned_cols=186 Identities=42% Similarity=0.729 Sum_probs=158.1
Q ss_pred CCcCCCCCCCcceECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEEE
Q psy13219 1 MMRNVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMY 80 (193)
Q Consensus 1 vL~dv~~~d~~t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY 80 (193)
+|+|++++||+|+|||+++++||+|||||++++.||+||.++|++|+++|++|++|++++.++|||++..++++.|||||
T Consensus 75 ~L~~~~~~d~st~i~G~~l~~Pi~iAPmg~~~l~~~~~e~~laraA~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy 154 (392)
T 2nzl_A 75 MLRNVAETDLSTSVLGQRVSMPICVGATAMQRMAHVDGELATVRACQSLGTGMMLSSWATSSIEEVAEAGPEALRWLQLY 154 (392)
T ss_dssp CSSCCTTCBCCEEETTEEESSSEEECCCSCGGGTSTTHHHHHHHHHHHHTCEEEECTTCSSCHHHHHHHCTTSEEEEEEC
T ss_pred hccCCcCCCcceEECCEecCCceEeccccccccccchHHHHHHHHHHHcCCCeeccchHHHHHHHHHHhcCCCcEEEEEE
Confidence 58999999999999999999999999999999999999999999999999999999999999999998877789999999
Q ss_pred eecCHHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCCCCCccchhhhhccccCcccchhhcccccccCCcchh
Q psy13219 81 IFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFTMPPYLSLANFRNLKQHNEDISKFRDISAEECSSGLT 160 (193)
Q Consensus 81 ~~~dr~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (193)
+++|++.+.++++||+++||++|+||+|+|+.|+|++|+||+|.+|++++++|+.+.... +.+ ++|. .++.+..
T Consensus 155 ~~~d~~~~~~~~~ra~~~G~~al~itvd~p~~g~R~~d~r~~~~lp~~~~~~n~~~~~~~--~~p-~~~~---~~g~~~~ 228 (392)
T 2nzl_A 155 IYKDREVTKKLVRQAEKMGYKAIFVTVDTPYLGNRLDDVRNRFKLPPQLRMKNFETSTLS--FSP-EENF---GDDSGLA 228 (392)
T ss_dssp CBSSHHHHHHHHHHHHHTTCCCEEEECSCSSCCCCHHHHHHTCCCCTTCCCTTC-----------------------CHH
T ss_pred ecCCHHHHHHHHHHHHHCCCCEEEEeCCCCCccchhHhHhhccCCccccchhhhhhhhcc--cCc-cccc---cCcchHH
Confidence 999999999999999999999999999999999999999999999999877775432110 000 0110 1122344
Q ss_pred hHhhhhCCCCCCHHHHHHHHhcCCCCEEEecC
Q psy13219 161 DYVANQFDDSVDWDDVRSLVQATKLPIVCKGI 192 (193)
Q Consensus 161 ~~~~~~~~~~~tW~di~wlr~~~~lPivlKGI 192 (193)
.++...+++.++|++|+|||+.|++||++|||
T Consensus 229 ~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv 260 (392)
T 2nzl_A 229 AYVAKAIDPSISWEDIKWLRRLTSLPIVAKGI 260 (392)
T ss_dssp HHHHHHBCTTCCHHHHHHHC--CCSCEEEEEE
T ss_pred HHHhhcCChHHHHHHHHHHHHhhCCCEEEEec
Confidence 56777789999999999999999999999997
No 3
>2nli_A Lactate oxidase; flavoenzyme, FMN, D-lactate, oxidoreducta; HET: FMN; 1.59A {Aerococcus viridans} PDB: 2zfa_A* 2du2_A* 2e77_A* 2j6x_A*
Probab=100.00 E-value=3.7e-41 Score=297.54 Aligned_cols=177 Identities=29% Similarity=0.486 Sum_probs=141.0
Q ss_pred CCcCCCCCCCcceECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEEE
Q psy13219 1 MMRNVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMY 80 (193)
Q Consensus 1 vL~dv~~~d~~t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY 80 (193)
+|+|++++||+|+|||+++++||+|||||++++.||+||.++|++|+++|++|++|++++.++|||++..++++.|||||
T Consensus 61 ~L~~~~~~d~st~i~G~~l~~Pi~iAPma~~g~~~~~~e~~la~aa~~~G~~~~~s~~~s~~le~v~~~~~~~~~~~QLy 140 (368)
T 2nli_A 61 LAQDVEAPDTSTEILGHKIKAPFIMAPIAAHGLAHTTKEAGTARAVSEFGTIMSISAYSGATFEEISEGLNGGPRWFQIY 140 (368)
T ss_dssp CCCCCSCCCCCEEETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHHHTTCCEEEEEC
T ss_pred ccCCCccCCcceEECCEecCCceeecchhhccCCCcHHHHHHHHHHHHcCCCEEeechHhHHHHHHHHhCCCCCEEEEEe
Confidence 58899999999999999999999999999999999999999999999999999999999999999988766789999999
Q ss_pred eecCHHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCCCCCccchhhhhccccCcccchhhcccccccCCcchh
Q psy13219 81 IFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFTMPPYLSLANFRNLKQHNEDISKFRDISAEECSSGLT 160 (193)
Q Consensus 81 ~~~dr~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (193)
+++|++.+.++++||+++||++|+||+|+|+.|+|++|+||+|.+| ++.+++..... + ... +..+
T Consensus 141 ~~~d~~~~~~~~~ra~~aG~~ai~it~d~p~~g~r~~d~~~~~~~p--~~~~~~~~~~~---------~--~~~-g~~l- 205 (368)
T 2nli_A 141 MAKDDQQNRDILDEAKSDGATAIILTADSTVSGNRDRDVKNKFVYP--FGMPIVQRYLR---------G--TAE-GMSL- 205 (368)
T ss_dssp CBSSHHHHHHHHHHHHHTTCSCEEEESBCC---CBC--------CC--SCCHHHHHHHT---------T--SGG-GC---
T ss_pred ccCCHHHHHHHHHHHHHCCCCEEEEcCCCCcccchhHHHhhcccCc--chhhhhhcccc---------c--CCC-CchH-
Confidence 9999999999999999999999999999999999999999999888 44344321000 0 000 1111
Q ss_pred hHhhhhCCCCCCHHHHHHHHhcCCCCEEEecC
Q psy13219 161 DYVANQFDDSVDWDDVRSLVQATKLPIVCKGI 192 (193)
Q Consensus 161 ~~~~~~~~~~~tW~di~wlr~~~~lPivlKGI 192 (193)
.++....++.++|++|+|||+.|++||++|||
T Consensus 206 ~~~~~~~d~~~~~~~i~~lr~~~~~PvivK~v 237 (368)
T 2nli_A 206 NNIYGASKQKISPRDIEEIAGHSGLPVFVKGI 237 (368)
T ss_dssp ---CTTBCSBCCHHHHHHHHHHSSSCEEEEEE
T ss_pred HhhhhccCchhhHHHHHHHHHHcCCCEEEEcC
Confidence 23333458999999999999999999999997
No 4
>1gox_A (S)-2-hydroxy-acid oxidase, peroxisomal; oxidoreductase (oxygen(A)); HET: FMN; 2.00A {Spinacia oleracea} SCOP: c.1.4.1 PDB: 1gyl_A* 1al8_A* 1al7_A* 2cdh_0
Probab=100.00 E-value=3e-39 Score=285.25 Aligned_cols=183 Identities=45% Similarity=0.738 Sum_probs=159.3
Q ss_pred CCcCCCCCCCcceECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEEE
Q psy13219 1 MMRNVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMY 80 (193)
Q Consensus 1 vL~dv~~~d~~t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY 80 (193)
+|+|++++||+|+|||+++++||+|||||+++++||+||.++|++|+++|++|++|++++.++|||+++.+ ++.|||||
T Consensus 52 ~l~~~~~~d~~t~i~G~~~~~Pi~iAPmg~~~l~~~~~e~a~a~aa~~~G~~~~~s~~~~~~ieev~~~~~-~~~~~QLy 130 (370)
T 1gox_A 52 ILIDVTNIDMTTTILGFKISMPIMIAPTAMQKMAHPEGEYATARAASAAGTIMTLSSWATSSVEEVASTGP-GIRFFQLY 130 (370)
T ss_dssp CSCCCSCCBCCEEETTEEESSSEEECCCSCGGGTCTTHHHHHHHHHHHTTCCEEECTTCSSCHHHHHTTCC-CCEEEEEC
T ss_pred ccCCCCCCCCceEECCcccCCceeEcccchhhhccchHHHHHHHHHHHcCCCeeccCCCCCCHHHHHhhcC-CCceEEEe
Confidence 58999999999999999999999999999999999999999999999999999999999999999998876 78999999
Q ss_pred eecCHHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCCCCCccchhhhhccccCcccchhhcccccccCCcchh
Q psy13219 81 IFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFTMPPYLSLANFRNLKQHNEDISKFRDISAEECSSGLT 160 (193)
Q Consensus 81 ~~~dr~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (193)
+.+|++.+.++++||+++||++|+||+|+|+.|+|++|+|++|.+|.+++.+++.+..... ... ..+..+.
T Consensus 131 ~~~d~~~~~~~~~~a~~~G~~ai~it~d~p~~g~r~~d~r~~~~~p~~~~~~~~~~~~~~~--------~~~-~~g~~~~ 201 (370)
T 1gox_A 131 VYKDRNVVAQLVRRAERAGFKAIALTVDTPRLGRREADIKNRFVLPPFLTLKNFEGIDLGK--------MDK-ANDSGLS 201 (370)
T ss_dssp CBSSHHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHTTCCCCTTCCCGGGSSSCCC------------------HH
T ss_pred cCCCchHHHHHHHHHHHCCCCEEEEeCCCCcccccHHHHHhccCCCcccchhhhhhhhhhc--------ccc-ccCccHH
Confidence 9999999999999999999999999999999999999999999999888777664321100 000 1122333
Q ss_pred hHhhhhCCCCCCHHHHHHHHhcCCCCEEEecCC
Q psy13219 161 DYVANQFDDSVDWDDVRSLVQATKLPIVCKGIP 193 (193)
Q Consensus 161 ~~~~~~~~~~~tW~di~wlr~~~~lPivlKGI~ 193 (193)
.++....++.++|++|+|+|+.|++|+++||+.
T Consensus 202 ~~v~~~~~~~~~~~~i~~l~~~~~~pv~vK~~~ 234 (370)
T 1gox_A 202 SYVAGQIDRSLSWKDVAWLQTITSLPILVKGVI 234 (370)
T ss_dssp HHHHHTBCTTCCHHHHHHHHHHCCSCEEEECCC
T ss_pred HHHHhhcCccchHHHHHHHHHHhCCCEEEEecC
Confidence 456667799999999999999999999999973
No 5
>1p4c_A L(+)-mandelate dehydrogenase; TIM barrel, hydroxy acid oxidizing enzyme, oxidoreductase; HET: FMN MES; 1.35A {Pseudomonas putida} SCOP: c.1.4.1 PDB: 1huv_A* 1p5b_A* 3giy_A* 2a7p_A* 2a85_A* 2a7n_A*
Probab=100.00 E-value=2.4e-39 Score=286.90 Aligned_cols=181 Identities=31% Similarity=0.543 Sum_probs=155.8
Q ss_pred CCcCCCCCCCcceECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEEE
Q psy13219 1 MMRNVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMY 80 (193)
Q Consensus 1 vL~dv~~~d~~t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY 80 (193)
+|+|++++||+|+|||+++++||+|||+|+++++||++|.++|++|+++|++|++|+.++.++|||++. ++++.|||||
T Consensus 53 ~L~~~~~~d~st~i~G~~l~~Pv~iap~~~~~~~~~~~~~~~a~aa~~~G~~~~vss~s~~~le~i~~~-~~~~~~fQly 131 (380)
T 1p4c_A 53 RLVDVSRRSLQAEVLGKRQSMPLLIGPTGLNGALWPKGDLALARAATKAGIPFVLSTASNMSIEDLARQ-CDGDLWFQLY 131 (380)
T ss_dssp CSCCCSSCBCCEEETTEEESSSEEECCCSCGGGTSTTHHHHHHHHHHHHTCCEEECTTCSSCHHHHHHH-CCSCEEEEEC
T ss_pred ccCCCccCcceeEECCeecCCceEecCccccccCCCcHHHHHHHHHHHcCCCeecCccccCCHHHHHhc-cCCCeEEEEE
Confidence 589999999999999999999999999999999999999999999999999999999999999999876 4678999999
Q ss_pred eecCHHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCCCCCccchhhhhccccCcccchhhcccccccCCcchh
Q psy13219 81 IFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFTMPPYLSLANFRNLKQHNEDISKFRDISAEECSSGLT 160 (193)
Q Consensus 81 ~~~dr~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 160 (193)
+++ ++.+.++++||+++||++++||||+|+.|+|++|+|++|.+|..++..++... .+.++.. .+.....
T Consensus 132 ~~~-~~~~~~~i~~a~~aG~~al~vTvd~p~~g~r~~d~~~g~~~~~~~~~~~~~~~--------~~~~l~~-~~~~ala 201 (380)
T 1p4c_A 132 VIH-REIAQGMVLKALHTGYTTLVLTTDVAVNGYRERDLHNRFKIPPFLTLKNFEGI--------DLGKMDK-ANLEMQA 201 (380)
T ss_dssp CSS-HHHHHHHHHHHHHTTCCEEEEECSCSSCCCCHHHHHHTCCCCTTCCCGGGTTC--------CCSCCSS-TTTTTHH
T ss_pred ech-HHHHHHHHHHHHHcCCCEEEEeecCccccchhHHHhcCCCCccccCHHHhhhh--------hhhccCc-ccchHHH
Confidence 999 99999999999999999999999999999999999999988877666554210 0001100 1112233
Q ss_pred hHhhhhCCCCCCHHHHHHHHhcCCCCEEEecC
Q psy13219 161 DYVANQFDDSVDWDDVRSLVQATKLPIVCKGI 192 (193)
Q Consensus 161 ~~~~~~~~~~~tW~di~wlr~~~~lPivlKGI 192 (193)
.++...++|.++|++|+|+|+.|++|+++|||
T Consensus 202 ~~~~~~~~p~~~~~~i~~i~~~~~~Pv~vkgv 233 (380)
T 1p4c_A 202 ALMSRQMDASFNWEALRWLRDLWPHKLLVKGL 233 (380)
T ss_dssp HHTSSCCCTTCCHHHHHHHHHHCCSEEEEEEE
T ss_pred HHHHhhcCccccHHHHHHHHHhcCCCEEEEec
Confidence 44555679999999999999999999999997
No 6
>1kbi_A Cytochrome B2, L-LCR; flavocytochrome B2, electron transfer, oxidoreductase; HET: HEM FMN; 2.30A {Saccharomyces cerevisiae} SCOP: c.1.4.1 d.120.1.1 PDB: 1fcb_A* 1lco_A* 1ldc_A* 1sze_A* 2oz0_A* 1szf_A* 1szg_A* 1ltd_A* 1kbj_A* 1qcw_A* 3ks0_A*
Probab=100.00 E-value=1.6e-39 Score=297.63 Aligned_cols=178 Identities=29% Similarity=0.485 Sum_probs=152.9
Q ss_pred CCcCCCCCCCcceECCceeCCceeecchhccccCCc-hHHHHHHHHHhc--cCceeeeccCccccHHHHHhhC--CCCce
Q psy13219 1 MMRNVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHA-DGEVATARAAGM--MDAIMILSLMSTTSLEEVRAQN--PSTTL 75 (193)
Q Consensus 1 vL~dv~~~d~~t~~lG~~~~~P~~iaP~g~~~l~~~-~gE~~~araA~~--~g~~~~lst~ss~s~eei~~~~--~~~~~ 75 (193)
+|+|++++||+|+|||+++++||+||||++++++|| ++|+++|++|++ +|++|++|++++.|+|+|++.. +.++.
T Consensus 170 ~L~dv~~~d~st~i~G~~l~~Pi~iAPma~~~l~~~~~~e~alaraA~~~~~G~~~~~s~~a~~s~e~v~~~~~~~~~~~ 249 (511)
T 1kbi_A 170 ILVDVRKVDISTDMLGSHVDVPFYVSATALCKLGNPLEGEKDVARGCGQGVTKVPQMISTLASCSPEEIIEAAPSDKQIQ 249 (511)
T ss_dssp CSCCCSSCBCCEEETTEEESSSEEECCCSCGGGTCTTTTHHHHHHHHHSSSSCCCEEECTTCSSCHHHHHHTCCCSSCCE
T ss_pred cccCcccccCccccCCccCCCCeEeccchhccccChhhHHHHHHHHHHHhCCCeeEEeCCcccCCHHHHHhhcCCCCCCe
Confidence 689999999999999999999999999999999999 999999999999 9999999999999999998775 36789
Q ss_pred EEEEEeecCHHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCCCCCccchhhhhccccCcccchhhcccccccC
Q psy13219 76 WLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFTMPPYLSLANFRNLKQHNEDISKFRDISAEEC 155 (193)
Q Consensus 76 wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (193)
|||||+.+|++.++++++||+++||++|+||||+|+.|+||+|+||+|.+|... ...+... . . ..
T Consensus 250 ~~QLy~~~d~~~~~~~~~rae~aG~~al~itvd~p~~g~R~~~~r~g~~~p~~~-~~~~~g~-~------------~-~~ 314 (511)
T 1kbi_A 250 WYQLYVNSDRKITDDLVKNVEKLGVKALFVTVDAPSLGQREKDMKLKFSNTKAG-PKAMKKT-N------------V-EE 314 (511)
T ss_dssp EEEECCCSSHHHHHHHHHHHHHHTCSCEEEECSCSSCCCCHHHHHHHHTTCC--------CC-C------------C-SS
T ss_pred EEEEeecCCHHHHHHHHHHHHHcCCCEEEEeCCCCCccccHHHHhccCCCCccc-ccccccc-c------------c-cc
Confidence 999999999999999999999999999999999999999999999999887531 1111000 0 0 01
Q ss_pred CcchhhHhhhhCCCCCCHHHHHHHHhcCCCCEEEecCC
Q psy13219 156 SSGLTDYVANQFDDSVDWDDVRSLVQATKLPIVCKGIP 193 (193)
Q Consensus 156 ~~~~~~~~~~~~~~~~tW~di~wlr~~~~lPivlKGI~ 193 (193)
..+...++...+++.++|++|+|||+.|++||++|||+
T Consensus 315 ~~g~~~~~~~~~d~~~~~~~i~~lr~~~~~PvivKgv~ 352 (511)
T 1kbi_A 315 SQGASRALSKFIDPSLTWKDIEELKKKTKLPIVIKGVQ 352 (511)
T ss_dssp CCCGGGGCBTTBCTTCCHHHHHHHHHHCSSCEEEEEEC
T ss_pred cccHHHHHhhccChHhHHHHHHHHHHHhCCcEEEEeCC
Confidence 12334455566799999999999999999999999974
No 7
>2qr6_A IMP dehydrogenase/GMP reductase; NP_599840.1, G reductase domain, structural genomics, joint center for STR genomics, JCSG; HET: MSE; 1.50A {Corynebacterium glutamicum atcc 13032}
Probab=99.79 E-value=1.1e-20 Score=167.32 Aligned_cols=158 Identities=14% Similarity=0.162 Sum_probs=112.1
Q ss_pred CCcCCCCCCCcceECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeeecc--------CccccHHHHHhhCCC
Q psy13219 1 MMRNVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSL--------MSTTSLEEVRAQNPS 72 (193)
Q Consensus 1 vL~dv~~~d~~t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst--------~ss~s~eei~~~~~~ 72 (193)
+++|++++|++|+|+|.+++.||++||++ ++.|+ ++|+|++++|.++++|+ .++.++|||++....
T Consensus 48 ~~~~~~~vdlst~l~g~~l~~Pii~Apm~--g~~~~----~~a~a~a~~G~~gvl~~~~~~~~~~~~~~~~eeia~~~~~ 121 (393)
T 2qr6_A 48 RTRSSKDVDTTWHIDAYKFDLPFMNHPSD--ALASP----EFVIEMGKQGGLGVINAEGLWGRHADLDEAIAKVIAAYEE 121 (393)
T ss_dssp CCCCGGGCBCCEEETTEEESSSEEECCCT--TTCCH----HHHHHHHHTTSBCEEETTSSTTTCSCHHHHHHHHHHHHHH
T ss_pred CCCChhHCCceeEEcccccCCCeEeCCCC--CcccH----HHHHHHHHcCCcEEEEecceecccCCchhHHHHHHHHHHh
Confidence 46799999999999999999999999998 67776 59999999999999998 667889999876432
Q ss_pred ------CceEEEEEeec-CHHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCCCCCccchhhhhccccCcccch
Q psy13219 73 ------TTLWLQMYIFK-DRALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFTMPPYLSLANFRNLKQHNEDIS 145 (193)
Q Consensus 73 ------~~~wfQlY~~~-dr~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~ 145 (193)
...|||+|+.+ |++.+.++++|++++|+.+++ ++.+++..+..+.+. ......
T Consensus 122 ~d~~~g~~~~~q~~~~~~d~~~~~~~i~~~~~~g~~v~~-----~v~~~~~~e~a~~~~-----------~agad~---- 181 (393)
T 2qr6_A 122 GDQAAATRTLQELHAAPLDTELLSERIAQVRDSGEIVAV-----RVSPQNVREIAPIVI-----------KAGADL---- 181 (393)
T ss_dssp HHHHHHHHHHHHHHHSCCCHHHHHHHHHHHHHTTSCCEE-----EECTTTHHHHHHHHH-----------HTTCSE----
T ss_pred cCCCccchhhhhcccccCCHHHHHHHHHHHhhcCCeEEE-----EeCCccHHHHHHHHH-----------HCCCCE----
Confidence 46799999766 999999999999999999877 233445554443220 000000
Q ss_pred hhcccccccCCcchhhHhhhhCCCCCCHHHHHHHHhcCCCCEEEecCC
Q psy13219 146 KFRDISAEECSSGLTDYVANQFDDSVDWDDVRSLVQATKLPIVCKGIP 193 (193)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~tW~di~wlr~~~~lPivlKGI~ 193 (193)
+.- ... . .......+..+|++|+|+++.|+.||++|||.
T Consensus 182 ----i~i-~~~-~---~~~~~~~~~~~~~~i~~l~~~~~~pvi~ggi~ 220 (393)
T 2qr6_A 182 ----LVI-QGT-L---ISAEHVNTGGEALNLKEFIGSLDVPVIAGGVN 220 (393)
T ss_dssp ----EEE-ECS-S---CCSSCCCC-----CHHHHHHHCSSCEEEECCC
T ss_pred ----EEE-eCC-c---cccccCCCcccHHHHHHHHHhcCCCEEECCcC
Confidence 000 000 0 00112234459999999999999999999973
No 8
>3sr7_A Isopentenyl-diphosphate delta-isomerase; isopentenyl pyrophosphate isomerase, TIM-barrel; 2.04A {Streptococcus mutans}
Probab=99.69 E-value=5.5e-17 Score=142.96 Aligned_cols=137 Identities=15% Similarity=0.190 Sum_probs=91.1
Q ss_pred cCCCCCCCcceECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHH-------HhhCCCCce
Q psy13219 3 RNVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEV-------RAQNPSTTL 75 (193)
Q Consensus 3 ~dv~~~d~~t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei-------~~~~~~~~~ 75 (193)
.|++++||+|+|||+++++||+|+||++....+++.+.++|++|+++|++|++|+++. .+|+- .+..|+++.
T Consensus 69 ~~~~~vd~st~i~g~~l~~Pi~iapMtgg~~~~~~in~~lA~~a~~~G~~~~vGs~~~-~le~~~~~~~~v~r~~P~~~~ 147 (365)
T 3sr7_A 69 YDLAEIDLSTHFAGQDFDFPFYINAMTGGSQKGKEVNEKLAQVADTCGLLFVTGSYST-ALKNPDDTSYQVKKSRPHLLL 147 (365)
T ss_dssp SCGGGCCCCEEETTEEESSSEEEECC----CCCHHHHHHHHHHHHHHTCCEEC------------------------CCE
T ss_pred CCcccccceEEECCEEccCceEeccccCCCcchhHHHHHHHHHHHHcCCCeecccccc-cccCccccceEehhhCCCCcE
Confidence 6788999999999999999999999999888899999999999999999999999985 34432 222244444
Q ss_pred EEEEEeecCHHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCCCCCccchhhhhccccCcccchhhcccccccC
Q psy13219 76 WLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFTMPPYLSLANFRNLKQHNEDISKFRDISAEEC 155 (193)
Q Consensus 76 wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (193)
+-.|-..... ++..+.++.+|+.||.+++|... | . ..| .
T Consensus 148 ianig~~~~~---e~~~~~ve~~~adal~ihln~~q----e--~----~~p---------------------------~- 186 (365)
T 3sr7_A 148 ATNIGLDKPY---QAGLQAVRDLQPLFLQVHINLMQ----E--L----LMP---------------------------E- 186 (365)
T ss_dssp EEEEETTSCH---HHHHHHHHHHCCSCEEEEECHHH----H--H----TSS---------------------------S-
T ss_pred EEEeCCCCCH---HHHHHHHHhcCCCEEEEeccccc----c--c----cCC---------------------------C-
Confidence 4433322222 34566667899999999999531 1 0 011 0
Q ss_pred CcchhhHhhhhCCCCC-CH-HHHHHHHhcCCCCEEEecC
Q psy13219 156 SSGLTDYVANQFDDSV-DW-DDVRSLVQATKLPIVCKGI 192 (193)
Q Consensus 156 ~~~~~~~~~~~~~~~~-tW-~di~wlr~~~~lPivlKGI 192 (193)
-++.+ +| +.|+|||+.|+.||++|||
T Consensus 187 -----------Gd~~~~~~~~~I~~l~~~~~~PVivK~v 214 (365)
T 3sr7_A 187 -----------GEREFRSWKKHLSDYAKKLQLPFILKEV 214 (365)
T ss_dssp -----------SCCCCHHHHHHHHHHHHHCCSCEEEEEC
T ss_pred -----------CCCcHHHHHHHHHHHHHhhCCCEEEEEC
Confidence 03344 68 6899999999999999987
No 9
>1vcf_A Isopentenyl-diphosphate delta-isomerase; TIM barrel, structural genomics, riken structural genomics/P initiative, RSGI; HET: FMN; 2.60A {Thermus thermophilus} SCOP: c.1.4.1 PDB: 1vcg_A* 3dh7_A*
Probab=99.66 E-value=1.3e-17 Score=144.69 Aligned_cols=144 Identities=17% Similarity=0.196 Sum_probs=95.4
Q ss_pred CCc--CCCCCCCcceECCceeCCceeecchhccccCCchHH---HHHHHHHhccCceeeeccCccccHHHHHhhCCCCce
Q psy13219 1 MMR--NVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGE---VATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTL 75 (193)
Q Consensus 1 vL~--dv~~~d~~t~~lG~~~~~P~~iaP~g~~~l~~~~gE---~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~ 75 (193)
+|+ |++++|++|+|||++++.||++||+++ .|+++| .++|++|+++|++|++|++++. +|+. +...
T Consensus 37 ~l~~~~~~~~d~~~~i~g~~l~~P~~iapm~g---~~~~~~~~~~~la~~a~~~G~~~~~~~~~~~-le~~-----~~~~ 107 (332)
T 1vcf_A 37 ALAGLALSEVDLTTPFLGKTLKAPFLIGAMTG---GEENGERINLALAEAAEALGVGMMLGSGRIL-LERP-----EALR 107 (332)
T ss_dssp TTCCCCGGGCCCCEEETTEEESSSEEECCCC------CCHHHHHHHHHHHHHHHTCEEEEEECHHH-HHCT-----TTHH
T ss_pred hCCCCCCCCCCcceEECCcccCCceEEecccc---CCcchhHHHHHHHHHHHHcCCCEEeCCchhc-ccCC-----Cccc
Confidence 466 788999999999999999999999874 377766 8999999999999999999886 7653 4567
Q ss_pred EEEEEeecCHHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCCCCCccchhhhhccccCcccchhhcccccccC
Q psy13219 76 WLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFTMPPYLSLANFRNLKQHNEDISKFRDISAEEC 155 (193)
Q Consensus 76 wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 155 (193)
|||+ +|++ +|.|+.|+|+.+...++... . ............ +. ..
T Consensus 108 ~~ql---~~~~--------------------~d~pv~~~~~~~q~~~~~~~-~-~~~a~~~~~~~a--------~~--i~ 152 (332)
T 1vcf_A 108 SFRV---RKVA--------------------PKALLIANLGLAQLRRYGRD-D-LLRLVEMLEADA--------LA--FH 152 (332)
T ss_dssp HHCC---TTTC--------------------SSSCEEEEEEGGGGGTCCHH-H-HHHHHHHHTCSE--------EE--EE
T ss_pred eEEe---eccC--------------------CCceeecccChhhhhccChH-H-HHHHHhhcCCCc--------ee--ec
Confidence 9996 4432 78888888886655443211 0 011000000000 00 00
Q ss_pred CcchhhHhhhhCCCCCC----HHHHHHHHhcCCCCEEEecC
Q psy13219 156 SSGLTDYVANQFDDSVD----WDDVRSLVQATKLPIVCKGI 192 (193)
Q Consensus 156 ~~~~~~~~~~~~~~~~t----W~di~wlr~~~~lPivlKGI 192 (193)
.......+. ++..+ |+.|+|+|+ |+.||++|+|
T Consensus 153 ~n~~~~~~~---~~~~~~~~~~~~i~~vr~-~~~Pv~vK~v 189 (332)
T 1vcf_A 153 VNPLQEAVQ---RGDTDFRGLVERLAELLP-LPFPVMVKEV 189 (332)
T ss_dssp CCHHHHHHT---TSCCCCTTHHHHHHHHCS-CSSCEEEECS
T ss_pred cchHHHHhc---CCCccHHHHHHHHHHHHc-CCCCEEEEec
Confidence 000011111 44444 899999999 9999999986
No 10
>1p0k_A Isopentenyl-diphosphate delta-isomerase; terpene biosynthesis, dimethylallyl diphosphate, flavoprotein; 1.90A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1p0n_A*
Probab=99.65 E-value=3.4e-16 Score=136.38 Aligned_cols=139 Identities=17% Similarity=0.202 Sum_probs=102.1
Q ss_pred CCc--CCCCCCCcceECCceeCCceeecch-hccccCCchHHHHHHHHHhccCceeeeccCccccHHH---------HHh
Q psy13219 1 MMR--NVCDRDSGLTVLGTRYRCPVGIAPS-AMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEE---------VRA 68 (193)
Q Consensus 1 vL~--dv~~~d~~t~~lG~~~~~P~~iaP~-g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~ee---------i~~ 68 (193)
+|+ |++++|++|+|||++++.||++||+ |+++..++++|.++|++|++.|++|++|++++. +|+ +..
T Consensus 34 ~l~~~~~~~~d~~~~i~g~~~~~P~~iApm~g~~~~~~~~~~~~~a~aa~~~G~~~~~~~~~~~-l~~~~~~~~~~~~~~ 112 (349)
T 1p0k_A 34 SLPDLALEQVDISTKIGELSSSSPIFINAMTGGGGKLTYEINKSLARAASQAGIPLAVGSQMSA-LKDPSERLSYEIVRK 112 (349)
T ss_dssp SCCCCCGGGCBCCEEETTEEESCSEEEECCCCSCHHHHHHHHHHHHHHHHHHTCCEECCCCTTT-TTCHHHHHHHHHHHH
T ss_pred ccCCCCcccCCceeEECCcccCCceEEcCccccchhhhhHHHHHHHHHHHHcCCcEEeccchhc-ccCcccccceehhhh
Confidence 466 7789999999999999999999997 656334577899999999999999999998764 433 333
Q ss_pred hCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCCCCCccchhhhhccccCcccchhhc
Q psy13219 69 QNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFTMPPYLSLANFRNLKQHNEDISKFR 148 (193)
Q Consensus 69 ~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~ 148 (193)
..++.+.+.|+....+.+... +.++.+|+.+|.++++.|. .+..|
T Consensus 113 ~~~~~pv~~~i~~~~~~~~~~---~~~~~~gad~i~i~~~~~~----------~~~~~---------------------- 157 (349)
T 1p0k_A 113 ENPNGLIFANLGSEATAAQAK---EAVEMIGANALQIHLNVIQ----------EIVMP---------------------- 157 (349)
T ss_dssp HCSSSCEEEEEETTCCHHHHH---HHHHHTTCSEEEEEECTTT----------TC-------------------------
T ss_pred hCCCceeEEeecCCCCHHHHH---HHHHhcCCCeEEecccchh----------hhcCC----------------------
Confidence 445678888887544554433 4457789999999998762 11000
Q ss_pred ccccccCCcchhhHhhhhCCCCC--CHHHHHHHHhcCCCCEEEecC
Q psy13219 149 DISAEECSSGLTDYVANQFDDSV--DWDDVRSLVQATKLPIVCKGI 192 (193)
Q Consensus 149 ~~~~~~~~~~~~~~~~~~~~~~~--tW~di~wlr~~~~lPivlKGI 192 (193)
..++.+ .|+.|+|+|+.++.||++||+
T Consensus 158 -----------------~~~~~~~~~~~~i~~vr~~~~~Pv~vK~~ 186 (349)
T 1p0k_A 158 -----------------EGDRSFSGALKRIEQICSRVSVPVIVKEV 186 (349)
T ss_dssp ----------------------CTTHHHHHHHHHHHCSSCEEEEEE
T ss_pred -----------------CCCcchHHHHHHHHHHHHHcCCCEEEEec
Confidence 002333 258899999999999999975
No 11
>3r2g_A Inosine 5'-monophosphate dehydrogenase; structural genomics, PSI-biology, NEW YORK structural genomi research consortium, nysgrc; 1.94A {Legionella pneumophila subsp}
Probab=99.59 E-value=1.6e-15 Score=133.34 Aligned_cols=99 Identities=15% Similarity=-0.025 Sum_probs=86.1
Q ss_pred CcCCC--CCC--CcceECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEE
Q psy13219 2 MRNVC--DRD--SGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWL 77 (193)
Q Consensus 2 L~dv~--~~d--~~t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wf 77 (193)
+++++ ++| ++|+|+|.+++.||++||| |+.+|.++|+|++++|.++++|+. .|+||+++... ..+||
T Consensus 20 ~~~~~r~~vd~~~~t~l~g~~l~~Pii~ApM------~~vte~~lA~A~a~~Gg~gvi~~~--~s~ee~~~~i~-~~~~~ 90 (361)
T 3r2g_A 20 NHHESRRVVETTSTDRLGKLTLNLPVISANM------DTITESNMANFMHSKGAMGALHRF--MTIEENIQEFK-KCKGP 90 (361)
T ss_dssp CCSCTTCCCCCCEECTTSSCEESSCEEECCS------TTTCSHHHHHHHHHTTCEEBCCSC--SCHHHHHHHHH-TCCSC
T ss_pred CCCCccccccceeeEEECCEEcCCCEEECCC------CCchHHHHHHHHHHcCCCEEEeCC--CCHHHHHHHHh-hcceE
Confidence 56666 755 5559999999999999996 788999999999999999999974 89999988764 35799
Q ss_pred EEEeecCHHHHHHHHHHHHHcCCcEEEEeeccCC
Q psy13219 78 QMYIFKDRALSLQMVQRAERSGYSAIVITMDTAV 111 (193)
Q Consensus 78 QlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD~pv 111 (193)
|.|...+++.+.++++++.++|++ +|++|++.
T Consensus 91 ~~~~~g~~~~~~e~~~~a~~aGvd--vI~id~a~ 122 (361)
T 3r2g_A 91 VFVSVGCTENELQRAEALRDAGAD--FFCVDVAH 122 (361)
T ss_dssp CBEEECSSHHHHHHHHHHHHTTCC--EEEEECSC
T ss_pred EEEEcCCCHHHHHHHHHHHHcCCC--EEEEeCCC
Confidence 999999999999999999999999 67888763
No 12
>3vkj_A Isopentenyl-diphosphate delta-isomerase; type 2 isopentenyl diphosphate isomerase; HET: FNR; 1.70A {Sulfolobus shibatae} PDB: 2zrv_A* 2zrw_A* 2zrx_A* 2zry_A* 2zrz_A* 3b03_A* 3b04_A* 3b05_A* 3b06_A* 2zru_A*
Probab=99.42 E-value=7.2e-13 Score=116.78 Aligned_cols=102 Identities=11% Similarity=0.040 Sum_probs=73.9
Q ss_pred CCCCCCCcceECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccc--------cHHHHHhhCCCCce
Q psy13219 4 NVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTT--------SLEEVRAQNPSTTL 75 (193)
Q Consensus 4 dv~~~d~~t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~--------s~eei~~~~~~~~~ 75 (193)
|++++||+|+|||++++.||++|||++......+.+..+|++|+++|++|++|+++.. |.+-+.+..|+.+.
T Consensus 43 ~~~~vd~st~~~g~~l~~Pv~ia~MtGgt~~~~~in~~la~~a~~~G~~~~vGs~~~~l~~~~~~~s~~~vr~~ap~~~~ 122 (368)
T 3vkj_A 43 SFSEINTKTKFFRKEISVPVMVTGMTGGRNELGRINKIIAEVAEKFGIPMGVGSQRVAIEKAEARESFAIVRKVAPTIPI 122 (368)
T ss_dssp BGGGCBCCEEETTEEESSSEEECCCCCSSHHHHHHHHHHHHHHHHHTCCEECCCCHHHHHCGGGSHHHHHHHHHCSSSCE
T ss_pred CcccccceeEECCEeccCCeEEecCCCCCchhhHHHHHHHHHHHHhCCCeeeecchhccCCHHHHhhHHHHHHhCcCcce
Confidence 7789999999999999999999998654332335668999999999999999999421 23224545677777
Q ss_pred EEEEEee-----cCHHHHHHHHHHHHHcCCcEEEEeec
Q psy13219 76 WLQMYIF-----KDRALSLQMVQRAERSGYSAIVITMD 108 (193)
Q Consensus 76 wfQlY~~-----~dr~~~~~ll~RAe~AG~~AlvvTVD 108 (193)
+-.+... .+.+..++ .++.+++.|+.|.+.
T Consensus 123 ~anlg~~ql~~~~~~~~~~~---av~~~~a~al~Ihln 157 (368)
T 3vkj_A 123 IANLGMPQLVKGYGLKEFQD---AIQMIEADAIAVHLN 157 (368)
T ss_dssp EEEEEGGGGGTTCCHHHHHH---HHHHTTCSEEEEECC
T ss_pred ecCcCeeecCCCCCHHHHHH---HHHHhcCCCeEEEec
Confidence 7666662 23333333 345568889988865
No 13
>1ypf_A GMP reductase; GUAC, purines, pyrimidines, nucleosides, nucleotides, nucleo nucleoside interconversions, spine, structural genomics; 1.80A {Bacillus anthracis} PDB: 2a1y_A*
Probab=99.19 E-value=2.7e-12 Score=111.44 Aligned_cols=129 Identities=9% Similarity=0.125 Sum_probs=86.2
Q ss_pred CcCCCCCCCcceECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEEEe
Q psy13219 2 MRNVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMYI 81 (193)
Q Consensus 2 L~dv~~~d~~t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY~ 81 (193)
++|++++|++|+|+|.+++.||++||++... .++++++.. ...|||+|.
T Consensus 28 ~~~~~~vdl~t~i~g~~l~~Pi~~a~mag~s------------------------------~~~la~a~~-~~gg~g~~~ 76 (336)
T 1ypf_A 28 VNSRSECDTTVTLGKHKFKLPVVPANMQTII------------------------------DERIATYLA-ENNYFYIMH 76 (336)
T ss_dssp CSSGGGCBCCEEETTEEESSSEEECSSTTTC------------------------------CHHHHHHHH-HTTCCCCCC
T ss_pred CCCcccCcceEEECCEEecCcEEECCCCCCC------------------------------hHHHHHHHH-hCCCEEEec
Confidence 5789999999999999999999998866321 133322211 124788888
Q ss_pred ecCHHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCCCCCccchhhhhccccCcccchhhcccccccCCcchhh
Q psy13219 82 FKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFTMPPYLSLANFRNLKQHNEDISKFRDISAEECSSGLTD 161 (193)
Q Consensus 82 ~~dr~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 161 (193)
.++++.++++++++++.|+ .+++| .|.++++.+.- +.+.+..... .+-.+. . .
T Consensus 77 ~~~~~~~~~~i~~~~~~g~---~v~v~---~g~~~~~~~~a---------~~~~~~g~~~----~~i~i~--~-~----- 129 (336)
T 1ypf_A 77 RFQPEKRISFIRDMQSRGL---IASIS---VGVKEDEYEFV---------QQLAAEHLTP----EYITID--I-A----- 129 (336)
T ss_dssp CSSGGGHHHHHHHHHHTTC---CCEEE---ECCSHHHHHHH---------HHHHHTTCCC----SEEEEE--C-S-----
T ss_pred CCCCHHHHHHHHHHHhcCC---eEEEe---CCCCHHHHHHH---------HHHHhcCCCC----CEEEEE--C-C-----
Confidence 8888888999999999886 66888 47777766431 1111110000 000000 0 0
Q ss_pred HhhhhCCCCCCHHHHHHHHhcCCCCEEEec-C
Q psy13219 162 YVANQFDDSVDWDDVRSLVQATKLPIVCKG-I 192 (193)
Q Consensus 162 ~~~~~~~~~~tW~di~wlr~~~~lPivlKG-I 192 (193)
.-++...|+.|+|+|+.|++|+++|| |
T Consensus 130 ----~G~~~~~~~~i~~lr~~~~~~~vi~G~v 157 (336)
T 1ypf_A 130 ----HGHSNAVINMIQHIKKHLPESFVIAGNV 157 (336)
T ss_dssp ----SCCSHHHHHHHHHHHHHCTTSEEEEEEE
T ss_pred ----CCCcHHHHHHHHHHHHhCCCCEEEECCc
Confidence 01456789999999999999999998 5
No 14
>1eep_A Inosine 5'-monophosphate dehydrogenase; alpha-beta barrel, TIM barrel, IMPDH, IMP dehydrogenase, LOO purine biosynthesis, oxidoreductase; 2.40A {Borrelia burgdorferi} SCOP: c.1.5.1
Probab=98.94 E-value=9.4e-11 Score=103.89 Aligned_cols=167 Identities=10% Similarity=0.043 Sum_probs=79.5
Q ss_pred CCCCCCCcceEC-CceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEE----
Q psy13219 4 NVCDRDSGLTVL-GTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQ---- 78 (193)
Q Consensus 4 dv~~~d~~t~~l-G~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQ---- 78 (193)
+++++|++|+|+ |.+++.||++|||++ ++++|++.| ++++|...+++ ++.++|++.+..+ ..+|+|
T Consensus 25 ~~~~vdlst~l~~g~~l~~Pii~Apm~~----~~~~ela~a--~a~aGglg~i~--~~~s~e~~~~~~~-~~~~~~~~~g 95 (404)
T 1eep_A 25 LPSEVSLKTQLTKNISLNIPFLSSAMDT----VTESQMAIA--IAKEGGIGIIH--KNMSIEAQRKEIE-KVKTYKFQKT 95 (404)
T ss_dssp CGGGCCCCEESSSSCEESSSEEECCCTT----TCSHHHHHH--HHHHTSEEEEC--SSSCHHHHHHHHH-HHHTCC----
T ss_pred CccccccceeccCCcccCCCEEeCCCCC----CCCHHHHHH--HHHCCCEEEEC--CCCCHHHHHHHHH-HHHhhccCCC
Confidence 678999999999 999999999999985 667887766 55566555565 5678998876643 234554
Q ss_pred EEeecCHHHHH-HHHHHHHHc----CCcEEEEeeccCCCCCchhhhhcCCCCCCccchhhhhccccCcccchhhcccccc
Q psy13219 79 MYIFKDRALSL-QMVQRAERS----GYSAIVITMDTAVLGSRYRDLKNKFTMPPYLSLANFRNLKQHNEDISKFRDISAE 153 (193)
Q Consensus 79 lY~~~dr~~~~-~ll~RAe~A----G~~AlvvTVD~pv~G~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~ 153 (193)
+|..+|....+ .++-..... +++.+..+.|.|.. .|+.+.+..+. . |+.. .+...........
T Consensus 96 ~~~~~~~~~~~~~l~~~~~~~~~~~~~~~~~~~~~~p~~-~~~~~~~~~~~----~---~i~~---~~~~~~~a~~~~~- 163 (404)
T 1eep_A 96 INTNGDTNEQKPEIFTAKQHLEKSDAYKNAEHKEDFPNA-CKDLNNKLRVG----A---AVSI---DIDTIERVEELVK- 163 (404)
T ss_dssp ----------------------------------CCTTC-CBCTTSCBCCE----E---EECS---CTTHHHHHHHHHH-
T ss_pred ceeccccccccccccccCCCCCHHHHHHHHHHhhhcchh-hhhcccCceEE----E---EeCC---ChhHHHHHHHHHH-
Confidence 66666644321 222211111 34555666666653 34333232221 0 0000 0000000000000
Q ss_pred cCCcchhhHhhhhCCCCCCHHHHHHHHhcC-CCCEEEecC
Q psy13219 154 ECSSGLTDYVANQFDDSVDWDDVRSLVQAT-KLPIVCKGI 192 (193)
Q Consensus 154 ~~~~~~~~~~~~~~~~~~tW~di~wlr~~~-~lPivlKGI 192 (193)
.+...+. .-...-++...|+.|+|+|+.+ +.||+++++
T Consensus 164 ~G~d~i~-i~~~~g~~~~~~e~i~~ir~~~~~~pviv~~v 202 (404)
T 1eep_A 164 AHVDILV-IDSAHGHSTRIIELIKKIKTKYPNLDLIAGNI 202 (404)
T ss_dssp TTCSEEE-ECCSCCSSHHHHHHHHHHHHHCTTCEEEEEEE
T ss_pred CCCCEEE-EeCCCCChHHHHHHHHHHHHHCCCCeEEEcCC
Confidence 0000000 0001124556799999999999 789999775
No 15
>1gte_A Dihydropyrimidine dehydrogenase; electron transfer, flavin, iron-sulfur clusters, pyrimidine catabolism, 5-fluorouracil degradation, oxidoreductase; HET: FMN FAD; 1.65A {Sus scrofa} SCOP: a.1.2.2 c.1.4.1 c.3.1.1 c.4.1.1 d.58.1.5 PDB: 1gt8_A* 1gth_A* 1h7w_A* 1h7x_A*
Probab=98.93 E-value=3.3e-09 Score=103.73 Aligned_cols=139 Identities=19% Similarity=0.185 Sum_probs=99.7
Q ss_pred CCCCCCcceECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeee-ccCc------------------------
Q psy13219 5 VCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMIL-SLMS------------------------ 59 (193)
Q Consensus 5 v~~~d~~t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~l-st~s------------------------ 59 (193)
+..+|++++++|.+++.||++||+++. .+...++++...|..+++ .|.+
T Consensus 528 v~~v~ls~~~~G~~~~nPv~lAa~~~~------~~~~~~~~~~~~g~G~vv~~t~~~~~~~~gn~~pr~~~~~~~g~~~~ 601 (1025)
T 1gte_A 528 VDLVDISVEMAGLKFINPFGLASAAPT------TSSSMIRRAFEAGWGFALTKTFSLDKDIVTNVSPRIVRGTTSGPMYG 601 (1025)
T ss_dssp GGGCCCCEEETTEEESSSEEECSSGGG------SSHHHHHHHHHHTCSEEECCCBCCGGGCCCCCSSCEEECCTTCSCCS
T ss_pred cccccceeeeccccccCcccccCCCCC------CCHHHHHHHHHCCcCeEEeceecccccccCCCCccEEeccccccccC
Confidence 457899999999999999999998653 334445666666777665 1111
Q ss_pred -------------ccc-------HHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhh
Q psy13219 60 -------------TTS-------LEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDL 119 (193)
Q Consensus 60 -------------s~s-------~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~ 119 (193)
+.+ ++++.+..++.+.|+|++...|.+...+++++++++||.+|.|++.+|.. .++++.
T Consensus 602 ~~~~~~~n~e~~~~~~~~~~~~~i~~~~~~~~~~~~i~~i~~g~~~~~~~~~a~~~~~~g~d~iein~~~P~~-~~~~~~ 680 (1025)
T 1gte_A 602 PGQSSFLNIELISEKTAAYWCQSVTELKADFPDNIVIASIMCSYNKNDWMELSRKAEASGADALELNLSCPHG-MGERGM 680 (1025)
T ss_dssp SCCSCEEECCCSCSSCHHHHHHHHHHHHHHCTTSEEEEEECCCSCHHHHHHHHHHHHHTTCSEEEEECCCBCC-CC----
T ss_pred CchhheeeeccccchhHHHHHHHHHHHHhcCCCCCeEEEecCCCCHHHHHHHHHHHHhcCCCEEEEECCCCCC-CCCCCc
Confidence 011 34555556678899999998999999999999999999999999998853 211110
Q ss_pred hcCCCCCCccchhhhhccccCcccchhhcccccccCCcchhhHhhhhCCCCCCHHHHHHHHhcCCCCEEEecC
Q psy13219 120 KNKFTMPPYLSLANFRNLKQHNEDISKFRDISAEECSSGLTDYVANQFDDSVDWDDVRSLVQATKLPIVCKGI 192 (193)
Q Consensus 120 r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~tW~di~wlr~~~~lPivlKGI 192 (193)
| ..+ ..++.+.|+.++|+|+.++.||++|..
T Consensus 681 --G----------------------------------~~~------~~~~~~~~~iv~~v~~~~~~Pv~vK~~ 711 (1025)
T 1gte_A 681 --G----------------------------------LAC------GQDPELVRNICRWVRQAVQIPFFAKLT 711 (1025)
T ss_dssp -------------------------------------SBG------GGCHHHHHHHHHHHHHHCSSCEEEEEC
T ss_pred --c----------------------------------ccc------ccCHHHHHHHHHHHHHhhCCceEEEeC
Confidence 0 000 013456788999999999999999963
No 16
>2c6q_A GMP reductase 2; TIM barrel, metal-binding, NADP, oxidoreductase, potassium; HET: IMP NDP; 1.70A {Homo sapiens} PDB: 2bzn_A* 2a7r_A* 2ble_A* 2bwg_A*
Probab=98.91 E-value=1.7e-09 Score=94.58 Aligned_cols=58 Identities=14% Similarity=0.029 Sum_probs=49.9
Q ss_pred CC-CCCCCcceEC-----CceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhh
Q psy13219 4 NV-CDRDSGLTVL-----GTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQ 69 (193)
Q Consensus 4 dv-~~~d~~t~~l-----G~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~ 69 (193)
++ +++|++|+|+ |.+++.||++|||+. .+|.++|+|++++|...+++. +.++|++.+.
T Consensus 35 ~~~~~vdl~t~l~~~~~~~~~l~~PIi~ApM~~------~~~~~lA~Ava~~Gglg~i~~--~~s~e~~~~~ 98 (351)
T 2c6q_A 35 KSRSEVDLTRSFSFRNSKQTYSGVPIIAANMDT------VGTFEMAKVLCKFSLFTAVHK--HYSLVQWQEF 98 (351)
T ss_dssp CCGGGCBCCEEEECTTTCCEEEECCEEECSSTT------TSCHHHHHHHHHTTCEEECCT--TCCHHHHHHH
T ss_pred CccccceeEEEeccccCcCccccCCEEECCCCC------CCcHHHHHHHHHCCCEEEEcC--CCCHHHHHHH
Confidence 56 7899999999 999999999999873 567899999999998888875 6788887664
No 17
>1vhn_A Putative flavin oxidoreducatase; structural genomics, unknown function; HET: FMN; 1.59A {Thermotoga maritima} SCOP: c.1.4.1
Probab=98.33 E-value=9.1e-07 Score=75.82 Aligned_cols=124 Identities=19% Similarity=0.065 Sum_probs=85.4
Q ss_pred eeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccc---------cHHHHHhhCCCCceEEEEEeecCHHHH
Q psy13219 18 RYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTT---------SLEEVRAQNPSTTLWLQMYIFKDRALS 88 (193)
Q Consensus 18 ~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~---------s~eei~~~~~~~~~wfQlY~~~dr~~~ 88 (193)
++..||++|||+. +. +....+.+++.|.-++++-+.+. .++.+ ....+.+.++||+ -+|.+..
T Consensus 2 ~l~nri~~APM~~--~t----~~~~r~~~~~~G~gli~te~~~~~~~~~~~~~~~~~l-~~~~~~~~~~QL~-g~~~~~~ 73 (318)
T 1vhn_A 2 SLEVKVGLAPMAG--YT----DSAFRTLAFEWGADFAFSEMVSAKGFLMNSQKTEELL-PQPHERNVAVQIF-GSEPNEL 73 (318)
T ss_dssp ---CEEEECCCTT--TC----SHHHHHHHHTTTCCCEECSCEEHHHHHTTCHHHHHHS-CCTTCTTEEEEEE-CSCHHHH
T ss_pred ccCCCEEECCCCC--CC----cHHHHHHHHHHCcCEEEeCCEEEcccccCCHhHHHhh-hCcCCCeEEEEeC-CCCHHHH
Confidence 4678999999873 32 35677777777777766654321 13333 2234578999999 7788999
Q ss_pred HHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCCCCCccchhhhhccccCcccchhhcccccccCCcchhhHhhhhCC
Q psy13219 89 LQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFTMPPYLSLANFRNLKQHNEDISKFRDISAEECSSGLTDYVANQFD 168 (193)
Q Consensus 89 ~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 168 (193)
.+..++|+++ |.+|-|++.+|....|. +++ + +++ .-+
T Consensus 74 ~~aa~~a~~~-~d~Iein~gcP~~~~r~----~~~-------------------------------G-~~l------~~~ 110 (318)
T 1vhn_A 74 SEAARILSEK-YKWIDLNAGCPVRKVVK----EGA-------------------------------G-GAL------LKD 110 (318)
T ss_dssp HHHHHHHTTT-CSEEEEEECCCCHHHHH----TTC-------------------------------G-GGG------GSC
T ss_pred HHHHHHHHHh-CCEEEEECCCCcHhcCC----CCc-------------------------------c-cch------hhC
Confidence 9999999999 99999999987643322 111 0 000 114
Q ss_pred CCCCHHHHHHHHhcCCCCEEEe---cC
Q psy13219 169 DSVDWDDVRSLVQATKLPIVCK---GI 192 (193)
Q Consensus 169 ~~~tW~di~wlr~~~~lPivlK---GI 192 (193)
+.+.|+.++++|+.++.||.+| |+
T Consensus 111 ~~~~~eiv~~v~~~~~~pv~vKir~G~ 137 (318)
T 1vhn_A 111 LRHFRYIVRELRKSVSGKFSVKTRLGW 137 (318)
T ss_dssp HHHHHHHHHHHHHHCSSEEEEEEESCS
T ss_pred HHHHHHHHHHHHHhhCCCEEEEecCCC
Confidence 5678999999999999999999 76
No 18
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=98.30 E-value=3.5e-06 Score=71.62 Aligned_cols=98 Identities=12% Similarity=0.095 Sum_probs=60.7
Q ss_pred CCCcceECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeeec-cCc--------------------------c
Q psy13219 8 RDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILS-LMS--------------------------T 60 (193)
Q Consensus 8 ~d~~t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~ls-t~s--------------------------s 60 (193)
+|++++++|.+++.||++|+.. .+.++|. .+.+.+.|+.+++. +.+ +
T Consensus 2 ~dl~~~i~g~~l~nPi~~Aag~----~~~~~~~--~~~~~~~G~g~v~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~ 75 (314)
T 2e6f_A 2 MCLKLNLLDHVFANPFMNAAGV----LCSTEED--LRCMTASSSGALVSKSCTSAPRDGNPEPRYMAFPLGSINSMGLPN 75 (314)
T ss_dssp CCCCEEETTEEESSSEEECTTS----SCSSHHH--HHHHHHSSCSCEECCCBCSSCBCCSCSCCEEEETTEEEECCCCCB
T ss_pred CCcceEECCEecCCCcEECCCC----CCCCHHH--HHHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCC
Confidence 5899999999999999999632 2334554 45678888877543 222 1
Q ss_pred ccH----HHHHhh-C-CCCceEEEEEeecCHHHHHHHHHHHHHcCCc---EEEEeeccCCC
Q psy13219 61 TSL----EEVRAQ-N-PSTTLWLQMYIFKDRALSLQMVQRAERSGYS---AIVITMDTAVL 112 (193)
Q Consensus 61 ~s~----eei~~~-~-~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~---AlvvTVD~pv~ 112 (193)
..+ +++... . ++.+...|+. -.+.+...+.+++++++||. +|-|++-+|..
T Consensus 76 ~g~~~~~~~~~~~~~~~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~~~iein~~~P~~ 135 (314)
T 2e6f_A 76 LGFDFYLKYASDLHDYSKKPLFLSIS-GLSVEENVAMVRRLAPVAQEKGVLLELNLSCPNV 135 (314)
T ss_dssp SCHHHHHHHHHHTCCTTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECCCCCS
T ss_pred cCHHHHHHHHHHHhhcCCCcEEEEeC-CCCHHHHHHHHHHHHHhCCCcCceEEEEcCCCCC
Confidence 122 223322 1 2445566664 34556666777777777777 67777665543
No 19
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=98.26 E-value=2.7e-06 Score=73.10 Aligned_cols=89 Identities=17% Similarity=0.290 Sum_probs=61.4
Q ss_pred CCCCcceECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEEE----ee
Q psy13219 7 DRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMY----IF 82 (193)
Q Consensus 7 ~~d~~t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY----~~ 82 (193)
.+|++++++|.+++.||++|+ | ++.++| .++++++.|+.++++ .+.++|+.. ....++|||+| +.
T Consensus 42 ~~~l~~~i~g~~l~npi~~aa-g----~~~~~~--~~~~~a~~G~g~i~~--~~~~~~~~~--g~~~pr~~~~~~d~~~i 110 (336)
T 1f76_A 42 VPAKPVNCMGLTFKNPLGLAA-G----LDKDGE--CIDALGAMGFGSIEI--GTVTPRPQP--GNDKPRLFRLVDAEGLI 110 (336)
T ss_dssp CCCCCEEETTEEESSSEEECT-T----SSTTCC--CHHHHHHTTCSEEEE--EEECSSCBC--CSCSCCEEEETTTTEEE
T ss_pred CCCCCeEECCEEcCCCcEeCc-c----cCCcHH--HHHHHHHcCccEEEe--CCCCCCCCC--CCCCcceeeccccceee
Confidence 489999999999999999994 3 255666 677788889887654 334444321 22357899998 21
Q ss_pred -----cCHHHHHHHHHHHHHcCCc-EEEEee
Q psy13219 83 -----KDRALSLQMVQRAERSGYS-AIVITM 107 (193)
Q Consensus 83 -----~dr~~~~~ll~RAe~AG~~-AlvvTV 107 (193)
.+.+ .+++++++++++++ .+++++
T Consensus 111 n~~g~~~~g-~~~~~~~~~~~~~~~~~~v~i 140 (336)
T 1f76_A 111 NRMGFNNLG-VDNLVENVKKAHYDGVLGINI 140 (336)
T ss_dssp ECCCCCBCC-HHHHHHHHHHCCCCSEEEEEE
T ss_pred ecCCCCCcC-HHHHHHHHHhcccCCcEEEEe
Confidence 1122 35677788887766 688887
No 20
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=98.01 E-value=4.5e-05 Score=64.62 Aligned_cols=96 Identities=11% Similarity=0.118 Sum_probs=57.0
Q ss_pred CcceECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeeec-cCcccc--------------------------
Q psy13219 10 SGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILS-LMSTTS-------------------------- 62 (193)
Q Consensus 10 ~~t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~ls-t~ss~s-------------------------- 62 (193)
++++++|.+++.||++|| | ..+.++|.. +.+.+.|..+++. +.+..+
T Consensus 2 l~~~i~g~~l~npv~~Aa-g---~~~~~~~~~--~~~~~~G~g~i~~~~v~~~~~~gn~~pr~~~~~~~~in~~g~~~~g 75 (311)
T 1jub_A 2 LNTTFANAKFANPFMNAS-G---VHCMTIEDL--EELKASQAGAYITKSSTLEKREGNPLPRYVDLELGSINSMGLPNLG 75 (311)
T ss_dssp CCEEETTEEESSSEEECT-T---SSCSSHHHH--HHHHHSSCSCCBCCCBCSSCBCCSCSCCEEEETTEEEECCCCCBSC
T ss_pred CceEECCEEcCCCcEECC-C---CCCCCHHHH--HHHHHCCCCEEEeCccCCcccCCCCCCcEEecccceeecCCCCCcc
Confidence 689999999999999996 2 223345543 6677777766653 222111
Q ss_pred H----HHHHhh---C-CCCceEEEEEeecCHHHHHHHHHHHHHcCCc-EEEEeeccCCC
Q psy13219 63 L----EEVRAQ---N-PSTTLWLQMYIFKDRALSLQMVQRAERSGYS-AIVITMDTAVL 112 (193)
Q Consensus 63 ~----eei~~~---~-~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~-AlvvTVD~pv~ 112 (193)
+ +++... . ++.+...|+. -.+.+...+.+++++++|+. +|.+.+-+|..
T Consensus 76 ~~~~~~~~~~~~~~~~~~~p~~~~i~-g~~~~~~~~~a~~~~~~g~d~~iein~~~P~~ 133 (311)
T 1jub_A 76 FDYYLDYVLKNQKENAQEGPIFFSIA-GMSAAENIAMLKKIQESDFSGITELNLSCPNV 133 (311)
T ss_dssp HHHHHHHHHHHHHHTCSSSCCEEEEC-CSSHHHHHHHHHHHHHSCCCSEEEEESCCCCS
T ss_pred HHHHHHHHHHHHHhcCCCCCEEEEcC-CCCHHHHHHHHHHHHhcCCCeEEEEeccCCCC
Confidence 2 222211 1 1344555654 34556666677777777777 77777655543
No 21
>1ep3_A Dihydroorotate dehydrogenase B (PYRD subunit); heterotetramer, alpha-beta barrel, beta sandwich, FAD domain alpha/beta NADP domain; HET: FMN FAD; 2.10A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ep2_A* 1ep1_A*
Probab=97.99 E-value=1.3e-05 Score=67.50 Aligned_cols=100 Identities=14% Similarity=0.179 Sum_probs=64.3
Q ss_pred CCCCCCcceECCceeCCceeecchhccccCCchHHHHHHHHH--hccCceee-----------------------eccC-
Q psy13219 5 VCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAA--GMMDAIMI-----------------------LSLM- 58 (193)
Q Consensus 5 v~~~d~~t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA--~~~g~~~~-----------------------lst~- 58 (193)
++++|++++|+|.+++.||++|| |+.+... |. .+.+ ...|...+ +++.
T Consensus 2 ~~~~~l~~~~~g~~l~npi~~aa-g~~~~~~---~~--~~~~~~~g~G~~~~~si~~~p~~g~~~p~l~~~~~g~~~~~g 75 (311)
T 1ep3_A 2 TENNRLSVKLPGLDLKNPIIPAS-GCFGFGE---EY--AKYYDLNKLGSIMVKATTLHPRFGNPTPRVAETASGMLNAIG 75 (311)
T ss_dssp CCCTTTCEEETTEEESSSEEECT-TSSTTST---TG--GGTSCGGGSSCEEEEEECSSCBCCCCSCCEEEETTEEEECCC
T ss_pred CCCCccceEECCEECCCCcEECC-CCCCCCH---HH--HHHHHhcCCCEEEeCeeccCccCCCCCCeEEECCcccccccC
Confidence 36899999999999999999999 3333211 11 2333 34453321 1222
Q ss_pred -ccccHHHH--------HhhCCCCceEEEEEeecCHHHHHHHHHHHHH-cCCcEEEEeeccCC
Q psy13219 59 -STTSLEEV--------RAQNPSTTLWLQMYIFKDRALSLQMVQRAER-SGYSAIVITMDTAV 111 (193)
Q Consensus 59 -ss~s~eei--------~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~-AG~~AlvvTVD~pv 111 (193)
.+.+.+++ .+..++.+...||.-. +.+...+..+++++ +|+.+|-|++.+|.
T Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~p~~v~l~~~-~~~~~~~~a~~~~~~~g~d~iei~~~~p~ 137 (311)
T 1ep3_A 76 LQNPGLEVIMTEKLPWLNENFPELPIIANVAGS-EEADYVAVCAKIGDAANVKAIELNISCPN 137 (311)
T ss_dssp CCBCCHHHHHHTHHHHHHHHCTTSCEEEEECCS-SHHHHHHHHHHHTTSTTEEEEEEECCSEE
T ss_pred CCCcCHHHHHHHHHHHHHhcCCCCcEEEEEcCC-CHHHHHHHHHHHhccCCCCEEEEeCCCCC
Confidence 23333332 2213456788898743 56777788899988 99999999987664
No 22
>1wv2_A Thiazole moeity, thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI; 2.90A {Pseudomonas aeruginosa} SCOP: c.1.31.1
Probab=97.45 E-value=0.00019 Score=60.18 Aligned_cols=86 Identities=14% Similarity=0.259 Sum_probs=63.9
Q ss_pred CceEEEEEee-------cCHHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCCCCCccchhhhhccccCcccch
Q psy13219 73 TTLWLQMYIF-------KDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFTMPPYLSLANFRNLKQHNEDIS 145 (193)
Q Consensus 73 ~~~wfQlY~~-------~dr~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~~p~~~~~~~~~~~~~~~~~~~ 145 (193)
+..|++|++. .|...+.+..++.++.||+.+.+++|.|+.++|..|....+-+|... +
T Consensus 102 ~~~~iKlEv~~d~~~llpD~~~tv~aa~~L~~~Gf~Vlpy~~dd~~~akrl~~~G~~aVmPlg~-----------p---- 166 (265)
T 1wv2_A 102 GHNLVKLEVLADQKTLFPNVVETLKAAEQLVKDGFDVMVYTSDDPIIARQLAEIGCIAVMPLAG-----------L---- 166 (265)
T ss_dssp SCCEEEECCBSCTTTCCBCHHHHHHHHHHHHTTTCEEEEEECSCHHHHHHHHHSCCSEEEECSS-----------S----
T ss_pred CCCeEEEEeecCccccCcCHHHHHHHHHHHHHCCCEEEEEeCCCHHHHHHHHHhCCCEEEeCCc-----------c----
Confidence 5679999998 67777777777777779999999999999999999987654333110 0
Q ss_pred hhcccccccCCcchhhHhhhhCCCCCCHHHHHHHHhcCCCCEEEec
Q psy13219 146 KFRDISAEECSSGLTDYVANQFDDSVDWDDVRSLVQATKLPIVCKG 191 (193)
Q Consensus 146 ~~~~~~~~~~~~~~~~~~~~~~~~~~tW~di~wlr~~~~lPivlKG 191 (193)
. +++ ..-.+|+-|+.+++..+.|||+.|
T Consensus 167 --------I-GsG---------~Gi~~~~lI~~I~e~~~vPVI~eG 194 (265)
T 1wv2_A 167 --------I-GSG---------LGICNPYNLRIILEEAKVPVLVDA 194 (265)
T ss_dssp --------T-TCC---------CCCSCHHHHHHHHHHCSSCBEEES
T ss_pred --------C-CCC---------CCcCCHHHHHHHHhcCCCCEEEeC
Confidence 0 000 112479999999999999999984
No 23
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=96.79 E-value=0.0038 Score=54.06 Aligned_cols=88 Identities=15% Similarity=0.117 Sum_probs=55.2
Q ss_pred eCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCc-cccH-----HHHHhhC-CCCceEEEEEeecCHHHHHHH
Q psy13219 19 YRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMS-TTSL-----EEVRAQN-PSTTLWLQMYIFKDRALSLQM 91 (193)
Q Consensus 19 ~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~s-s~s~-----eei~~~~-~~~~~wfQlY~~~dr~~~~~l 91 (193)
+.-||++|||+. .....-. .++++++..|+.+ +-+. ...+ +++.+.. .+.+...||+ -.|.+...+.
T Consensus 2 l~nriv~APM~g--~td~~~r-~~~r~~Gg~gli~--te~~~~~~~~~~~~~~~~~~~~~~~p~~vQL~-g~~p~~~~~a 75 (350)
T 3b0p_A 2 LDPRLSVAPMVD--RTDRHFR-FLVRQVSLGVRLY--TEMTVDQAVLRGNRERLLAFRPEEHPIALQLA-GSDPKSLAEA 75 (350)
T ss_dssp CCCSEEECCCTT--TSSHHHH-HHHHHHCSSSBEE--CCCEEHHHHHHSCHHHHHCCCGGGCSEEEEEE-CSCHHHHHHH
T ss_pred CCCCEEECCCCC--CCHHHHH-HHHHHcCCCCEEE--eCCEEechhhcCCHHHHhccCCCCCeEEEEeC-CCCHHHHHHH
Confidence 567999999874 2221121 2444444444433 2221 1111 2343322 2467899998 5678888899
Q ss_pred HHHHHHcCCcEEEEeeccCCC
Q psy13219 92 VQRAERSGYSAIVITMDTAVL 112 (193)
Q Consensus 92 l~RAe~AG~~AlvvTVD~pv~ 112 (193)
.++++++||..|-|++.+|..
T Consensus 76 A~~a~~~G~D~IeIn~gcP~~ 96 (350)
T 3b0p_A 76 ARIGEAFGYDEINLNLGCPSE 96 (350)
T ss_dssp HHHHHHTTCSEEEEEECCCSH
T ss_pred HHHHHHcCCCEEEECCcCCCC
Confidence 999999999999999987753
No 24
>4ef8_A Dihydroorotate dehydrogenase; phenyl isothiocyanate, PYRD, oxidoreductase, oxidoreductase-oxidor inhibitor complex; HET: FMN; 1.56A {Leishmania major} PDB: 3gye_A* 3gz3_A* 4ef9_A* 3tro_A* 3tjx_A*
Probab=96.69 E-value=0.026 Score=49.12 Aligned_cols=102 Identities=11% Similarity=0.057 Sum_probs=62.6
Q ss_pred CCCCCCCcceECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeee-ccC------------------------
Q psy13219 4 NVCDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMIL-SLM------------------------ 58 (193)
Q Consensus 4 dv~~~d~~t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~l-st~------------------------ 58 (193)
.+.+.|++|+++|.++.-||++|. +..-.++|. .++....|.-+++ .|.
T Consensus 31 ~~~~~~L~~~~~Gl~~~NPv~lAA----G~~~~~~e~--~~~l~~~G~G~v~~ktvt~~pq~GNp~PR~~~~~~~~iN~~ 104 (354)
T 4ef8_A 31 GRGSMSLQVNLLNNTFANPFMNAA----GVMCTTTEE--LVAMTESASGSLVSKSCTPALREGNPTPRYQALPLGSINSM 104 (354)
T ss_dssp ---CCCCCEEETTEEESSSEEECT----TSSCSSHHH--HHHHHHSSCSCEEEEEECSSCBCCSCSCCEEEETTEEEECC
T ss_pred CCCCCCcceEECCEECCCCCEecc----CCCCCCHHH--HHHHHHcCCCeEEeCcccCcccCCCCCCcEEecchhhhccC
Confidence 356789999999999999999976 222123443 3444444443322 211
Q ss_pred --ccccHHH----HHhh--CCCCceEEEEEeecCHHHHHHHHHHHH---HcCCcEEEEeeccCCC
Q psy13219 59 --STTSLEE----VRAQ--NPSTTLWLQMYIFKDRALSLQMVQRAE---RSGYSAIVITMDTAVL 112 (193)
Q Consensus 59 --ss~s~ee----i~~~--~~~~~~wfQlY~~~dr~~~~~ll~RAe---~AG~~AlvvTVD~pv~ 112 (193)
.+..+|. +.+. .++.+...||. -.+.+...+.+++++ ++|+.+|.|.+=+|..
T Consensus 105 G~~n~G~~~~~~~l~~~~~~~~~pvivsI~-G~~~~d~~~~a~~l~~~~~~g~d~ielNisCPn~ 168 (354)
T 4ef8_A 105 GLPNNGFDFYLAYAAEQHDYGKKPLFLSMS-GLSMRENVEMCKRLAAVATEKGVILELNLSCPNV 168 (354)
T ss_dssp CCCBCCHHHHHHHHHHTCCTTTCCEEEEEC-CSSHHHHHHHHHHHHHHHHHHCCEEEEECSSCCS
T ss_pred CCCCcCHHHHHHHHHHHhhcCCCcEEEEec-cCCHHHHHHHHHHHhhhhhcCCCEEEEeCCCCCC
Confidence 1334443 4332 23457788874 456777777888887 6789999999888754
No 25
>3khj_A Inosine-5-monophosphate dehydrogenase; enzyme-inhibitor complex, oxidoreductase; HET: IMP C64; 2.80A {Cryptosporidium parvum}
Probab=96.38 E-value=0.0091 Score=52.02 Aligned_cols=88 Identities=9% Similarity=0.029 Sum_probs=55.0
Q ss_pred CCCCCCcceEC-CceeCCceeecchhccccCCchHHHHHHHHHh-ccCceeeeccCccccHHHHH----hh--CCCCceE
Q psy13219 5 VCDRDSGLTVL-GTRYRCPVGIAPSAMQKLAHADGEVATARAAG-MMDAIMILSLMSTTSLEEVR----AQ--NPSTTLW 76 (193)
Q Consensus 5 v~~~d~~t~~l-G~~~~~P~~iaP~g~~~l~~~~gE~~~araA~-~~g~~~~lst~ss~s~eei~----~~--~~~~~~w 76 (193)
.+++|++|+|. +..+..||+.|||... .|..+|.+.+ +-|+.++-. +.+.|++. +. .+..+.-
T Consensus 29 ~~~vdl~t~l~~~~~l~~Pii~apM~~v------t~~~lA~avA~~GGlgii~~---~~s~e~~~~~I~~vk~~~~~pvg 99 (361)
T 3khj_A 29 PREVSLETKLTKNVSLKIPLISSAMDTV------TEHLMAVGMARLGGIGIIHK---NMDMESQVNEVLKVKNSGGLRVG 99 (361)
T ss_dssp GGGCCCCEESSSSCEESSSEEECSSTTT------CSHHHHHHHHHTTCEEEECS---SSCHHHHHHHHHHHHHTTCCCCE
T ss_pred HHHccCceecccccccCCCEEeecCCCC------CcHHHHHHHHHcCCCeEEec---CCCHHHHHHHHHHHHhccCceEE
Confidence 46789999998 7999999999998743 2335666544 455555544 34444332 21 1233444
Q ss_pred EEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 77 LQMYIFKDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 77 fQlY~~~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
..+.... .+.++.+.++|+..|+|+
T Consensus 100 a~ig~~~-----~e~a~~l~eaGad~I~ld 124 (361)
T 3khj_A 100 AAIGVNE-----IERAKLLVEAGVDVIVLD 124 (361)
T ss_dssp EEECTTC-----HHHHHHHHHTTCSEEEEC
T ss_pred EEeCCCH-----HHHHHHHHHcCcCeEEEe
Confidence 5554432 567788889999966543
No 26
>3tjx_A Dihydroorotate dehydrogenase; PYRD, dhodh, lmdhodh, oxidored mutation H174A; HET: FMN; 1.64A {Leishmania major} PDB: 3gz3_A* 3gye_A* 3tro_A*
Probab=95.64 E-value=0.023 Score=48.92 Aligned_cols=41 Identities=12% Similarity=0.069 Sum_probs=29.7
Q ss_pred CCCCCcceECCceeCCceeecchhccccCCchHHHHHHHHHhccC
Q psy13219 6 CDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMD 50 (193)
Q Consensus 6 ~~~d~~t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g 50 (193)
.+.|++|++||.+|+-||++|. +.+..++|..-+-....+|
T Consensus 33 ~~~~L~v~~~Gl~f~NPvglAa----G~~~~~~e~~~~l~~~G~G 73 (354)
T 3tjx_A 33 GSMSLQVNLLNNTFANPFMNAA----GVMCTTTEELVAMTESASG 73 (354)
T ss_dssp CCCCCCEEETTEEESSSEEECT----TSSCSSHHHHHHHHHSSCS
T ss_pred CCCceeEEECCEEcCCCcEEcc----CCCCCCHHHHHHHHHcCCC
Confidence 4788999999999999999984 3345567755444444444
No 27
>3oix_A Putative dihydroorotate dehydrogenase; dihydrooro oxidase; TIM barrel, oxidoreductase; HET: MLY FMN; 2.40A {Streptococcus mutans}
Probab=95.49 E-value=0.16 Score=43.95 Aligned_cols=98 Identities=12% Similarity=0.066 Sum_probs=64.0
Q ss_pred CCCcceECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeeec-cCc--------------------------c
Q psy13219 8 RDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILS-LMS--------------------------T 60 (193)
Q Consensus 8 ~d~~t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~ls-t~s--------------------------s 60 (193)
.|++++++|.++.-||++|. +..-.+.| ..+++...|.-+++. |.+ +
T Consensus 36 ~~L~~~~~Gl~~~NPv~lAa----G~~~~~~e--~~~~~~~~G~G~v~~ktvt~~pq~gnp~PR~~~~~~~~iN~~G~~n 109 (345)
T 3oix_A 36 VSTHTTIGSFDFDNCLMNAA----GVYCMTRE--ELAAIDHSEAGSFVTXTGTLEERAGNPQPRYADTKLGSINSMGLPN 109 (345)
T ss_dssp CCCCEEETTEEESCSEEECT----TSSCSSHH--HHHHHHTSSCSBCBCCCBCSSCBCCSCSCCEEECSSEEEECCCCCB
T ss_pred CCcCeEECCEECCCCCEEcC----CCCCCCHH--HHHHHHHcCCCeEEeeeecCCCCCCCCCCcEEecccchhccCCCCC
Confidence 68999999999999999983 22111223 344455555544432 221 2
Q ss_pred ccH----HHHHh---hCCCCceEEEEEeecCHHHHHHHHHHHHHcCCc-EEEEeeccCCC
Q psy13219 61 TSL----EEVRA---QNPSTTLWLQMYIFKDRALSLQMVQRAERSGYS-AIVITMDTAVL 112 (193)
Q Consensus 61 ~s~----eei~~---~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~-AlvvTVD~pv~ 112 (193)
..+ +++.. ...+.+...||. -.+.+...+..++++++||. +|.|.+=+|..
T Consensus 110 ~G~~~~~~~l~~~~~~~~~~pvivsI~-g~~~~d~~~~a~~l~~~g~~d~ielNisCPn~ 168 (345)
T 3oix_A 110 LGINYYLDYVTELQKQPDSKNHFLSLV-GMSPEETHTILXMVEASKYQGLVELNLSCPNV 168 (345)
T ss_dssp SCHHHHHHHHHHHHHSTTCCCCEEEEC-CSSHHHHHHHHHHHHHSSCCSEEEEECSCCCS
T ss_pred hhHHHHHHHHHHHhhccCCCCEEEEec-CCCHHHHHHHHHHHhccCCCcEEEEecCCCCc
Confidence 233 33433 224567888986 45677788888999989988 99999888753
No 28
>1xm3_A Thiazole biosynthesis protein THIG; structural genomics, protein structure initiative, PSI, NESG, northeast structural genomics consortium; 1.80A {Bacillus subtilis} SCOP: c.1.31.1 PDB: 1tyg_A
Probab=95.43 E-value=0.03 Score=46.44 Aligned_cols=21 Identities=19% Similarity=0.510 Sum_probs=18.8
Q ss_pred CHHHHHHHHhcCCCCEEEe-cC
Q psy13219 172 DWDDVRSLVQATKLPIVCK-GI 192 (193)
Q Consensus 172 tW~di~wlr~~~~lPivlK-GI 192 (193)
+|+.++++++.++.|+++. ||
T Consensus 166 ~~~~l~~i~~~~~iPviv~gGI 187 (264)
T 1xm3_A 166 NPLNLSFIIEQAKVPVIVDAGI 187 (264)
T ss_dssp CHHHHHHHHHHCSSCBEEESCC
T ss_pred CHHHHHHHHhcCCCCEEEEeCC
Confidence 5899999999999999997 56
No 29
>4fo4_A Inosine 5'-monophosphate dehydrogenase; structural genomics, IMPDH, IMP, mycophenolic acid, MOA; HET: IMP MOA; 2.03A {Vibrio cholerae o1 biovar el tor} PDB: 4ff0_A* 4hlv_A* 4fez_A
Probab=94.45 E-value=0.083 Score=46.08 Aligned_cols=93 Identities=17% Similarity=0.064 Sum_probs=53.6
Q ss_pred CCCCCCcceEC-CceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhhC----CCCceEEEE
Q psy13219 5 VCDRDSGLTVL-GTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQN----PSTTLWLQM 79 (193)
Q Consensus 5 v~~~d~~t~~l-G~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~----~~~~~wfQl 79 (193)
.+++|++|+|. +..+..||+.|||... .|..+|.+.+++|-.-++.. +.+.|+..+.. ..++.-..+
T Consensus 30 ~~~vdl~t~lt~~~~l~~Pii~apM~~v------s~~~lA~avA~aGGlg~i~~--~~s~e~~~~~i~~vk~~~~l~vga 101 (366)
T 4fo4_A 30 PNTADLRTRLTKNIALNIPMVSASMDTV------TEARLAIALAQEGGIGFIHK--NMSIEQQAAQVHQVKISGGLRVGA 101 (366)
T ss_dssp GGGCBCCEEEETTEEESSSEEECCCTTT------CSHHHHHHHHHTTCEEEECS--SSCHHHHHHHHHHHHTTTSCCCEE
T ss_pred hhhcccceecccccccCCCEEeCCCCCC------ChHHHHHHHHHcCCceEeec--CCCHHHHHHHHHHHHhcCceeEEE
Confidence 34789999998 6889999999998732 23466666555544434432 34555442221 111111222
Q ss_pred EeecCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 80 YIFKDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 80 Y~~~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
-+..+ ....+.++.+.++|+..|+|+
T Consensus 102 ~vg~~-~~~~~~~~~lieaGvd~I~id 127 (366)
T 4fo4_A 102 AVGAA-PGNEERVKALVEAGVDVLLID 127 (366)
T ss_dssp ECCSC-TTCHHHHHHHHHTTCSEEEEE
T ss_pred EeccC-hhHHHHHHHHHhCCCCEEEEe
Confidence 22111 124466777889999987764
No 30
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=94.34 E-value=0.069 Score=45.47 Aligned_cols=87 Identities=11% Similarity=0.087 Sum_probs=54.9
Q ss_pred ceECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHH-------HHhhCCCCceEEEEEeecC
Q psy13219 12 LTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEE-------VRAQNPSTTLWLQMYIFKD 84 (193)
Q Consensus 12 t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~ee-------i~~~~~~~~~wfQlY~~~d 84 (193)
+++|| +..||+.+||+ ++.. ..++.++.++|..-++.+. ..+.++ +.+.. +.+...|++....
T Consensus 6 ~~~l~--~~~Pii~apM~--g~s~----~~la~av~~aG~lG~i~~~-~~~~~~~~~~i~~i~~~~-~~p~gvnl~~~~~ 75 (332)
T 2z6i_A 6 TELLK--IDYPIFQGGMA--WVAD----GDLAGAVSKAGGLGIIGGG-NAPKEVVKANIDKIKSLT-DKPFGVNIMLLSP 75 (332)
T ss_dssp HHHHT--CSSSEEECCCT--TTCC----HHHHHHHHHHTSBEEEECT-TCCHHHHHHHHHHHHHHC-CSCEEEEECTTST
T ss_pred hHHhC--CCCCEEeCCCC--CCCc----HHHHHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhc-CCCEEEEecCCCC
Confidence 34666 67899999997 3433 3466677777753333322 123332 22222 3567788876322
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 85 RALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 85 r~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
. ..+.++++.++|+..+.+..+.|
T Consensus 76 -~-~~~~~~~a~~~g~d~V~~~~g~p 99 (332)
T 2z6i_A 76 -F-VEDIVDLVIEEGVKVVTTGAGNP 99 (332)
T ss_dssp -T-HHHHHHHHHHTTCSEEEECSSCG
T ss_pred -C-HHHHHHHHHHCCCCEEEECCCCh
Confidence 1 45688899999999999988765
No 31
>2gjl_A Hypothetical protein PA1024; 2-nitropropane dioxygenase, 2-nitropropane, FMN, oxidoreduct; HET: FMN; 2.00A {Pseudomonas aeruginosa PAO1} PDB: 2gjn_A*
Probab=94.29 E-value=0.22 Score=42.11 Aligned_cols=89 Identities=11% Similarity=0.125 Sum_probs=56.5
Q ss_pred ceECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHH-------HHhhCCCCceEEEEEeec-
Q psy13219 12 LTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEE-------VRAQNPSTTLWLQMYIFK- 83 (193)
Q Consensus 12 t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~ee-------i~~~~~~~~~wfQlY~~~- 83 (193)
+++|| +..||+.|||++ +. +..+|.++.++|..-++...+..+.++ +.+.. +.+.-.++++..
T Consensus 9 ~~~l~--~~~Pii~apM~g--vs----~~~la~av~~aGglG~i~~~~~~s~~~l~~~i~~i~~~~-~~p~~v~l~v~~~ 79 (328)
T 2gjl_A 9 TETFG--VEHPIMQGGMQW--VG----RAEMAAAVANAGGLATLSALTQPSPEALAAEIARCRELT-DRPFGVNLTLLPT 79 (328)
T ss_dssp HHHHT--CSSSEEECCCTT--TC----SHHHHHHHHHTTSBCEEETTTSSSHHHHHHHHHHHHHHC-SSCCEEEEEECCC
T ss_pred HHHhC--CCCCEEECCCCC--CC----cHHHHHHHHHCCCeEEeCCCCCCCHHHHHHHHHHHHHhc-CCCeEEEEecccc
Confidence 45675 468999999963 43 345777888777544454332222333 33322 345667888861
Q ss_pred --CHHHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 84 --DRALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 84 --dr~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
+++ ..+.++.+.++|+..|.+..+.|
T Consensus 80 ~~~~~-~~~~~~~~~~~g~d~V~~~~g~p 107 (328)
T 2gjl_A 80 QKPVP-YAEYRAAIIEAGIRVVETAGNDP 107 (328)
T ss_dssp SSCCC-HHHHHHHHHHTTCCEEEEEESCC
T ss_pred ccCcc-HHHHHHHHHhcCCCEEEEcCCCc
Confidence 122 45678888999999999998765
No 32
>3bw2_A 2-nitropropane dioxygenase; TIM barrel, oxidoreductase; HET: FMN; 2.10A {Streptomyces ansochromogenes} PDB: 3bw4_A* 3bw3_A*
Probab=90.18 E-value=0.76 Score=39.46 Aligned_cols=84 Identities=10% Similarity=0.046 Sum_probs=52.5
Q ss_pred CCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHH-------HhhCCCCceEEEEEeecCH-------
Q psy13219 20 RCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEV-------RAQNPSTTLWLQMYIFKDR------- 85 (193)
Q Consensus 20 ~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei-------~~~~~~~~~wfQlY~~~dr------- 85 (193)
..||+.|||++ ++ .+..+|.|+.++|-.-++++ ...+.|++ .+.. +.+.-.+++...+.
T Consensus 10 ~~Pii~apMag-gv----s~~~la~av~~aGglG~i~~-~~~s~~~l~~~i~~~~~~~-~~p~gVnl~~~~~~~~~~~~~ 82 (369)
T 3bw2_A 10 PLPIVQAPMAG-GV----SVPQLAAAVCEAGGLGFLAA-GYKTADGMYQEIKRLRGLT-GRPFGVNVFMPQPELAESGAV 82 (369)
T ss_dssp SSSEEECCCTT-TT----SCHHHHHHHHHTTSBEEEEC-TTSCHHHHHHHHHHHHHHC-CSCEEEEEECCCCCC---CHH
T ss_pred cCCEEeCCCCC-CC----CcHHHHHHHHHCCCEEEcCC-CCCCHHHHHHHHHHHHHhC-CCCeEEEEecCCCCcccHHHH
Confidence 88999999974 22 23567777777876555554 23344433 2322 23555666665431
Q ss_pred --------------------------HHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 86 --------------------------ALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 86 --------------------------~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
+...+.++.+.++|+..+.++...|
T Consensus 83 ~~~~~~l~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~g~~~V~~~~g~~ 133 (369)
T 3bw2_A 83 EVYAHQLAGEAAWYETELGDPDGGRDDGYDAKLAVLLDDPVPVVSFHFGVP 133 (369)
T ss_dssp HHHHHHTHHHHHHTTCCCCCSCSCSSTTHHHHHHHHHHSCCSEEEEESSCC
T ss_pred HHHHHHHHHHHHHcCCCcCcccccccccHHHHHHHHHhcCCCEEEEeCCCC
Confidence 1135667888889999999988765
No 33
>3bo9_A Putative nitroalkan dioxygenase; TM0800, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE 2PE; 2.71A {Thermotoga maritima MSB8}
Probab=85.48 E-value=2.7 Score=35.46 Aligned_cols=84 Identities=7% Similarity=0.076 Sum_probs=49.6
Q ss_pred eeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHH----HhhC--CCCceEEEEEeecCHHHHHHH
Q psy13219 18 RYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEV----RAQN--PSTTLWLQMYIFKDRALSLQM 91 (193)
Q Consensus 18 ~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei----~~~~--~~~~~wfQlY~~~dr~~~~~l 91 (193)
.+..||+.|||++ +.+ ..+|.++.++|..-+++.. ..+.|++ .+.. .+.+.-.++... +. ...+.
T Consensus 24 ~~~~Pii~apM~g--vs~----~~la~av~~aGglG~i~~~-~~~~~~l~~~i~~i~~~~~~p~gVnl~~~-~~-~~~~~ 94 (326)
T 3bo9_A 24 EIEHPILMGGMAW--AGT----PTLAAAVSEAGGLGIIGSG-AMKPDDLRKAISELRQKTDKPFGVNIILV-SP-WADDL 94 (326)
T ss_dssp TCSSSEEECCCTT--TSC----HHHHHHHHHTTSBEEEECT-TCCHHHHHHHHHHHHTTCSSCEEEEEETT-ST-THHHH
T ss_pred CCCCCEEECCCCC--CCC----HHHHHHHHhCCCcEEeCCC-CCCHHHHHHHHHHHHHhcCCCEEEEEecc-CC-CHHHH
Confidence 4578999999973 433 3467777777754444322 2233332 2111 123444555542 22 13567
Q ss_pred HHHHHHcCCcEEEEeeccC
Q psy13219 92 VQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 92 l~RAe~AG~~AlvvTVD~p 110 (193)
++.+.++|+..+.+..+.|
T Consensus 95 ~~~~~~~g~d~V~l~~g~p 113 (326)
T 3bo9_A 95 VKVCIEEKVPVVTFGAGNP 113 (326)
T ss_dssp HHHHHHTTCSEEEEESSCC
T ss_pred HHHHHHCCCCEEEECCCCc
Confidence 8888899999999987765
No 34
>1ea0_A Glutamate synthase [NADPH] large chain; oxidoreductase, iron sulphur flavoprotein; HET: OMT FMN AKG; 3.0A {Azospirillum brasilense} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 2vdc_A*
Probab=84.43 E-value=0.38 Score=48.81 Aligned_cols=54 Identities=11% Similarity=-0.101 Sum_probs=41.6
Q ss_pred CCCCCcceECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHH
Q psy13219 6 CDRDSGLTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEV 66 (193)
Q Consensus 6 ~~~d~~t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei 66 (193)
+++|+.+ ++..||+++||++..+ .++...++|+||.++|+.+.++..+ .+.|+.
T Consensus 841 ~ev~~~~-----~I~~Pf~isaMS~Gal-S~ea~~aLA~Aa~~aGg~~~tGeGg-~~pe~~ 894 (1479)
T 1ea0_A 841 DEVESIT-----AIRKRFITPGMSMGAL-SPEAHGTLNVAMNRIGAKSDSGEGG-EDPARF 894 (1479)
T ss_dssp GGSCCHH-----HHHTTEEEEECCBTTB-CHHHHHHHHHHHHHTTCEEECCTTC-CCGGGS
T ss_pred ccccccc-----cccCCeEecCcccccc-CHHHHHHHHHHHHHcCCeeEcCCCc-cCHHHh
Confidence 3455545 6799999999987655 6788999999999999999988654 344444
No 35
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=76.70 E-value=22 Score=28.29 Aligned_cols=18 Identities=33% Similarity=0.484 Sum_probs=10.7
Q ss_pred CHHHHHHHHhcCCCCEEE
Q psy13219 172 DWDDVRSLVQATKLPIVC 189 (193)
Q Consensus 172 tW~di~wlr~~~~lPivl 189 (193)
+|+-++.+++..+.|++.
T Consensus 188 ~~~~i~~l~~~~~ipvia 205 (266)
T 2w6r_A 188 DTEMIRFVRPLTTLPIIA 205 (266)
T ss_dssp CHHHHHHHGGGCCSCEEE
T ss_pred CHHHHHHHHHHcCCCEEE
Confidence 456666666666666654
No 36
>3ks6_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics, JCSG; HET: MSE; 1.80A {Agrobacterium tumefaciens str} PDB: 3ks5_A*
Probab=76.14 E-value=4.2 Score=32.77 Aligned_cols=74 Identities=11% Similarity=0.073 Sum_probs=47.2
Q ss_pred chHHHHHHHHHhccCc--eeeeccCccccHHHHHhhCCCCceEEEEE------------------------eecCHHHHH
Q psy13219 36 ADGEVATARAAGMMDA--IMILSLMSTTSLEEVRAQNPSTTLWLQMY------------------------IFKDRALSL 89 (193)
Q Consensus 36 ~~gE~~~araA~~~g~--~~~lst~ss~s~eei~~~~~~~~~wfQlY------------------------~~~dr~~~~ 89 (193)
++-+..+++.-.+.|. ..+++|+....++.+.+..|.-+.++ ++ -+.....+.
T Consensus 116 ~~~~~~v~~~l~~~~~~~~v~~~SF~~~~l~~~~~~~p~~~~~l-~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 194 (250)
T 3ks6_A 116 EGFVALVIAGLERHSMLERTTFSSFLLASMDELWKATTRPRLWL-VSPSVLQQLGPGAVIETAIAHSIHEIGVHIDTADA 194 (250)
T ss_dssp TTHHHHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCCSCEEEE-ECHHHHHHHHHHHHHHHHHHTTCCEEEEEGGGCCH
T ss_pred hHHHHHHHHHHHhcCCCCCEEEEeCCHHHHHHHHHHCCCCcEEE-EecccccccchhHHHHHHHhcCCCEEecchhhCCH
Confidence 3445566666666654 57889998888988888777544331 11 111122345
Q ss_pred HHHHHHHHcCCcEEEEeeccC
Q psy13219 90 QMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 90 ~ll~RAe~AG~~AlvvTVD~p 110 (193)
+++++|+++|.+..+.|||.+
T Consensus 195 ~~v~~~~~~G~~V~~WTvn~~ 215 (250)
T 3ks6_A 195 GLMAQVQAAGLDFGCWAAHTP 215 (250)
T ss_dssp HHHHHHHHTTCEEEEECCCSH
T ss_pred HHHHHHHHCCCEEEEEeCCCH
Confidence 677778888888888887764
No 37
>3ffs_A Inosine-5-monophosphate dehydrogenase; beta-alpha barrel, TIM fold, oxidoreductase; 3.19A {Cryptosporidium parvum}
Probab=75.67 E-value=2.5 Score=37.15 Aligned_cols=55 Identities=11% Similarity=0.066 Sum_probs=40.4
Q ss_pred CCCCCcceEC-CceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHh
Q psy13219 6 CDRDSGLTVL-GTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRA 68 (193)
Q Consensus 6 ~~~d~~t~~l-G~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~ 68 (193)
+++|++|.|- ...+..||+-|||+. . .+..+|.|.+++|-.-+++. +.++|++++
T Consensus 27 ~~v~l~t~lt~~l~l~~PIi~a~M~~--V----s~~~lA~Ava~aGGlGvi~~--~~~~e~~~~ 82 (400)
T 3ffs_A 27 REVSLETKLTKNVSLKIPLISSAMDT--V----TEHLMAVGMARLGGIGIIHK--NMDMESQVN 82 (400)
T ss_dssp GGCCCCEESSSSCEESSSEEECSCTT--T----CSSHHHHHHHTTTCEEEECS--SSCHHHHHH
T ss_pred HHccCccchhcccCCCCCEEeCCCCC--c----CcHHHHHHHHHCCCEEEeCC--CCCHHHHHH
Confidence 5788999886 467899999999873 3 34467777778887777774 667776653
No 38
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=73.51 E-value=36 Score=28.99 Aligned_cols=47 Identities=17% Similarity=0.044 Sum_probs=28.6
Q ss_pred CcceECCceeCCceeecchhccccCCchH---HHHHHHHHhccCceeeec
Q psy13219 10 SGLTVLGTRYRCPVGIAPSAMQKLAHADG---EVATARAAGMMDAIMILS 56 (193)
Q Consensus 10 ~~t~~lG~~~~~P~~iaP~g~~~l~~~~g---E~~~araA~~~g~~~~ls 56 (193)
...+|=+.++.-.|+.|||+...-..++| |.....=+.++|..++++
T Consensus 7 ~P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rAg~GLiit 56 (364)
T 1vyr_A 7 TPLKVGAVTAPNRVFMAPLTRLRSIEPGDIPTPLMGEYYRQRASAGLIIS 56 (364)
T ss_dssp SCEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHHTTTSSEEEE
T ss_pred CCeeECCEEECCccEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEE
Confidence 34677778899999999997653212332 444444444445555543
No 39
>1ofd_A Ferredoxin-dependent glutamate synthase 2; oxidoreductase, complex enzyme, substrate channeling, amidotransferase, flavoprotein, iron-sulphur; HET: FMN AKG; 2.00A {Synechocystis SP} SCOP: b.80.4.1 c.1.4.1 d.153.1.1 PDB: 1llz_A* 1lm1_A* 1llw_A* 1ofe_A*
Probab=73.15 E-value=1.2 Score=45.51 Aligned_cols=42 Identities=10% Similarity=-0.102 Sum_probs=35.6
Q ss_pred eeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCcc
Q psy13219 18 RYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMST 60 (193)
Q Consensus 18 ~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss 60 (193)
++..||+++||++..+ -++...++|.||.++|+.+.++..+.
T Consensus 865 ~I~~Pfii~aMS~Gsl-S~ea~~aLA~Aas~aGg~~~tGeGg~ 906 (1520)
T 1ofd_A 865 SIVKRFCTGGMSLGAL-SREAHETLAIAMNRLGAKSNSGEGGE 906 (1520)
T ss_dssp HHHTTEECCCBCTTTS-CHHHHHHHHHHHHHHTCBCEECTTCC
T ss_pred cccCceEecCcCcccc-cHHHHHHHHHHHHHcCCceEeCCCCC
Confidence 6789999999986554 56788999999999999999987653
No 40
>3s5o_A 4-hydroxy-2-oxoglutarate aldolase, mitochondrial; beta barrel, schiff base, hydroxyproline metabolis; HET: KPI; 1.97A {Homo sapiens} SCOP: c.1.10.0 PDB: 3s5n_A
Probab=71.96 E-value=26 Score=29.12 Aligned_cols=86 Identities=12% Similarity=0.064 Sum_probs=51.2
Q ss_pred CceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHH-------HhhCC-CCceEEEEEeecCHHH
Q psy13219 21 CPVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEV-------RAQNP-STTLWLQMYIFKDRAL 87 (193)
Q Consensus 21 ~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei-------~~~~~-~~~~wfQlY~~~dr~~ 87 (193)
.|-++.|+--.+-++.++=..+++-..+.|+- ++.+|.+ +.|.||- .+... ..+....+- ..+-+.
T Consensus 19 ~~alvTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~ 97 (307)
T 3s5o_A 19 YPPVTTPFTATAEVDYGKLEENLHKLGTFPFRGFVVQGSNGEFPFLTSSERLEVVSRVRQAMPKNRLLLAGSG-CESTQA 97 (307)
T ss_dssp ECBCCCCBCTTSCBCHHHHHHHHHHHTTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHTSCTTSEEEEECC-CSSHHH
T ss_pred EEeeEccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHcCCCCcEEEecC-CCCHHH
Confidence 35556676444444555556677777778874 3444443 3444432 23332 223333332 235667
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q psy13219 88 SLQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvTV 107 (193)
+.++.++|+++|+.++++..
T Consensus 98 ai~la~~A~~~Gadavlv~~ 117 (307)
T 3s5o_A 98 TVEMTVSMAQVGADAAMVVT 117 (307)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcC
Confidence 78999999999999999873
No 41
>2gou_A Oxidoreductase, FMN-binding; OLD yeallow enzyme, flavoenzyme; HET: BOG FMN PE4; 1.40A {Shewanella oneidensis} PDB: 2gq8_A* 2gq9_A* 2gqa_A*
Probab=71.05 E-value=28 Score=29.75 Aligned_cols=46 Identities=13% Similarity=0.130 Sum_probs=28.3
Q ss_pred cceECCceeCCceeecchhccccCCchH---HHHHHHHHhccCceeeec
Q psy13219 11 GLTVLGTRYRCPVGIAPSAMQKLAHADG---EVATARAAGMMDAIMILS 56 (193)
Q Consensus 11 ~t~~lG~~~~~P~~iaP~g~~~l~~~~g---E~~~araA~~~g~~~~ls 56 (193)
..+|=+.++.-.|+.|||+...-..++| |.....=+.+++..++++
T Consensus 8 P~~ig~~~l~NRiv~aPm~~~~a~~~~g~~t~~~~~~y~~rA~~GLiit 56 (365)
T 2gou_A 8 PITLGALTLKNRIVMPPMTRSRASQPGDVANHMMAIYYAQRASAGLIVS 56 (365)
T ss_dssp CEEETTEEESSSEEECCCCCCCCBTTTTBCCHHHHHHHHTTTTSSEEEE
T ss_pred CeeECCEEEcCceEECCCCCCcccCCCCCCCHHHHHHHHHHhcCCEEEE
Confidence 4567788999999999997654211343 455555455545444443
No 42
>2ehh_A DHDPS, dihydrodipicolinate synthase; structural genomics, NPPSFA, national project on protein structural and functional analyses; 1.90A {Aquifex aeolicus}
Probab=69.28 E-value=20 Score=29.52 Aligned_cols=84 Identities=8% Similarity=-0.016 Sum_probs=52.1
Q ss_pred ceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHH-------HhhC-CCCceEEEEEeecCHHHH
Q psy13219 22 PVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEV-------RAQN-PSTTLWLQMYIFKDRALS 88 (193)
Q Consensus 22 P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei-------~~~~-~~~~~wfQlY~~~dr~~~ 88 (193)
|.++.|+- .+-.+.++=..+++-.-+.|+- ++++|.+ +.|.||- .+.. +..+...++- ..+-+.+
T Consensus 7 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 84 (294)
T 2ehh_A 7 VALITPFK-EGEVDYEALGNLIEFHVDNGTDAILVCGTTGESPTLTFEEHEKVIEFAVKRAAGRIKVIAGTG-GNATHEA 84 (294)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHTTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSCHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHH
Confidence 55677776 6555666666777777777764 3445443 4454433 2222 2334444442 2355677
Q ss_pred HHHHHHHHHcCCcEEEEee
Q psy13219 89 LQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 89 ~~ll~RAe~AG~~AlvvTV 107 (193)
.++.++|+++|+.++++..
T Consensus 85 i~la~~A~~~Gadavlv~~ 103 (294)
T 2ehh_A 85 VHLTAHAKEVGADGALVVV 103 (294)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 8899999999999999883
No 43
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=68.32 E-value=17 Score=23.53 Aligned_cols=35 Identities=29% Similarity=0.363 Sum_probs=31.0
Q ss_pred CCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEE
Q psy13219 71 PSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVI 105 (193)
Q Consensus 71 ~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~Alvv 105 (193)
+.+..|.|+--+++++..+.+.++.+..|+.+.++
T Consensus 6 ~~~~~~vQvGaf~~~~~A~~~~~~L~~~g~~~~i~ 40 (79)
T 1x60_A 6 SSGLYKVQIGAFKVKANADSLASNAEAKGFDSIVL 40 (79)
T ss_dssp CCCEEEEEEEEESCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCCCEEEEEEEcCCHHHHHHHHHHHHhCCCCeEEe
Confidence 34678999999999999999999999999998775
No 44
>3b0p_A TRNA-dihydrouridine synthase; TIM barrel, oxidoreductase; HET: FMN; 1.70A {Thermus thermophilus} PDB: 3b0u_X* 3b0v_C*
Probab=67.83 E-value=37 Score=28.72 Aligned_cols=21 Identities=19% Similarity=0.180 Sum_probs=17.1
Q ss_pred HHHHHHHHHHHHcCCcEEEEe
Q psy13219 86 ALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~AlvvT 106 (193)
+.+.+++++++++|+.+|.|+
T Consensus 144 ~~~~~~a~~l~~aG~d~I~V~ 164 (350)
T 3b0p_A 144 RGLAQSVEAMAEAGVKVFVVH 164 (350)
T ss_dssp HHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHHHHcCCCEEEEe
Confidence 356788899999999998874
No 45
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=67.73 E-value=53 Score=27.43 Aligned_cols=23 Identities=4% Similarity=0.024 Sum_probs=19.0
Q ss_pred CCCCHHHHHHHHhcCCCCEEEec
Q psy13219 169 DSVDWDDVRSLVQATKLPIVCKG 191 (193)
Q Consensus 169 ~~~tW~di~wlr~~~~lPivlKG 191 (193)
+...|+-++.+|+.+++||+.=|
T Consensus 262 ~~~~~~~~~~ir~~~~iPVi~~G 284 (338)
T 1z41_A 262 PGYQVSFAEKIREQADMATGAVG 284 (338)
T ss_dssp TTTTHHHHHHHHHHHCCEEEECS
T ss_pred ccchHHHHHHHHHHCCCCEEEEC
Confidence 34678999999999999998744
No 46
>3l21_A DHDPS, dihydrodipicolinate synthase; DAPA, dimer, RV2753C, lysine biosynthesis, amino-acid biosynthesis, diaminopimelate biosynthesis; HET: KPI CME; 2.10A {Mycobacterium tuberculosis} SCOP: c.1.10.1 PDB: 1xxx_A
Probab=67.54 E-value=24 Score=29.35 Aligned_cols=86 Identities=10% Similarity=0.010 Sum_probs=52.2
Q ss_pred CceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHH-------HhhC-CCCceEEEEEeecCHHH
Q psy13219 21 CPVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEV-------RAQN-PSTTLWLQMYIFKDRAL 87 (193)
Q Consensus 21 ~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei-------~~~~-~~~~~wfQlY~~~dr~~ 87 (193)
.|.++.|+--.+-++.++=..+++-..+.|+- ++.+|.+ +.|.||- .+.. +..+...++- ..+-+.
T Consensus 20 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 98 (304)
T 3l21_A 20 LTAMVTPFSGDGSLDTATAARLANHLVDQGCDGLVVSGTTGESPTTTDGEKIELLRAVLEAVGDRARVIAGAG-TYDTAH 98 (304)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHH
T ss_pred EEEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHH
Confidence 35566776544444555556666666667764 4445543 3444443 2222 3334455442 346677
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q psy13219 88 SLQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvTV 107 (193)
+.++.+.|+++|+.++++..
T Consensus 99 ai~la~~a~~~Gadavlv~~ 118 (304)
T 3l21_A 99 SIRLAKACAAEGAHGLLVVT 118 (304)
T ss_dssp HHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEECC
Confidence 88999999999999999973
No 47
>2yxg_A DHDPS, dihydrodipicolinate synthase; MJ0244, TIM beta/alpha-barrel fold, structural genomics, NPPSFA; 2.20A {Methanocaldococcus jannaschii DSM2661}
Probab=67.45 E-value=20 Score=29.53 Aligned_cols=83 Identities=17% Similarity=0.030 Sum_probs=50.5
Q ss_pred ceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHH-------HhhC-CCCceEEEEEeecCHHHH
Q psy13219 22 PVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEV-------RAQN-PSTTLWLQMYIFKDRALS 88 (193)
Q Consensus 22 P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei-------~~~~-~~~~~wfQlY~~~dr~~~ 88 (193)
|.++.|+- .+-++.++=..+++-.-+.|+- ++.+|.+ +.|.||- .+.. +..+...++- ..+-+.+
T Consensus 7 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 84 (289)
T 2yxg_A 7 PAIITPFK-NKEVDFDGLEENINFLIENGVSGIVAVGTTGESPTLSHEEHKKVIEKVVDVVNGRVQVIAGAG-SNCTEEA 84 (289)
T ss_dssp EBCCCCEE-TTEECHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSSHHHH
T ss_pred eeeecCcC-CCCcCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHHH
Confidence 55667776 5555666656677666666763 3445543 3444433 2222 2334444442 2355677
Q ss_pred HHHHHHHHHcCCcEEEEe
Q psy13219 89 LQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 89 ~~ll~RAe~AG~~AlvvT 106 (193)
.++.+.|+++|+.++++.
T Consensus 85 i~la~~a~~~Gadavlv~ 102 (289)
T 2yxg_A 85 IELSVFAEDVGADAVLSI 102 (289)
T ss_dssp HHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHhcCCCEEEEC
Confidence 889999999999999988
No 48
>3fkr_A L-2-keto-3-deoxyarabonate dehydratase; DHDPS/NAL family, complex, pyruvate, lyase; HET: KPI; 1.80A {Azospirillum brasilense} PDB: 3fkk_A
Probab=67.40 E-value=24 Score=29.36 Aligned_cols=89 Identities=11% Similarity=-0.031 Sum_probs=53.4
Q ss_pred CceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHH-------HhhC-CCCceEEEEEeecCHHH
Q psy13219 21 CPVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEV-------RAQN-PSTTLWLQMYIFKDRAL 87 (193)
Q Consensus 21 ~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei-------~~~~-~~~~~wfQlY~~~dr~~ 87 (193)
.|.++.|+--.+-++.++=..+++-.-+.|+- ++++|.+ +.|.||- .+.. +..+.+.++- ..+-+.
T Consensus 13 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 91 (309)
T 3fkr_A 13 FPVVPTTFADTGDLDLASQKRAVDFMIDAGSDGLCILANFSEQFAITDDERDVLTRTILEHVAGRVPVIVTTS-HYSTQV 91 (309)
T ss_dssp CCBCCCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred EEeeeCCCCcCCCcCHHHHHHHHHHHHHcCCCEEEECccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEecC-CchHHH
Confidence 45667776544444555555666666666663 4444443 3444432 2222 3344555553 345667
Q ss_pred HHHHHHHHHHcCCcEEEEeeccCCC
Q psy13219 88 SLQMVQRAERSGYSAIVITMDTAVL 112 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvTVD~pv~ 112 (193)
+.++.++|+++|+.++++.. |..
T Consensus 92 ai~la~~A~~~Gadavlv~~--Pyy 114 (309)
T 3fkr_A 92 CAARSLRAQQLGAAMVMAMP--PYH 114 (309)
T ss_dssp HHHHHHHHHHTTCSEEEECC--SCB
T ss_pred HHHHHHHHHHcCCCEEEEcC--CCC
Confidence 78999999999999999874 654
No 49
>3dz1_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2, structural genomics; 1.87A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=67.39 E-value=23 Score=29.57 Aligned_cols=85 Identities=8% Similarity=0.034 Sum_probs=51.7
Q ss_pred CceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHH-------HHhhCCCCceEEEEEeecCHHHH
Q psy13219 21 CPVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEE-------VRAQNPSTTLWLQMYIFKDRALS 88 (193)
Q Consensus 21 ~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~ee-------i~~~~~~~~~wfQlY~~~dr~~~ 88 (193)
.|.++.|+--.+-++.++=..+++-..+.|+- ++++|.+ +.|.|| +.+..+..+.+.++- ..+-+.+
T Consensus 13 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Lt~~Er~~v~~~~v~~~grvpViaGvg-~~~t~~a 91 (313)
T 3dz1_A 13 FAIAPTPFHDDGKIDDVSIDRLTDFYAEVGCEGVTVLGILGEAPKLDAAEAEAVATRFIKRAKSMQVIVGVS-APGFAAM 91 (313)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEEESTGGGTGGGSCHHHHHHHHHHHHHHCTTSEEEEECC-CSSHHHH
T ss_pred EEEeeCCCCCCCCcCHHHHHHHHHHHHHCCCCEEEeCccCcChhhCCHHHHHHHHHHHHHHcCCCcEEEecC-CCCHHHH
Confidence 35566776544444555556677766677763 4445443 344443 233343334444432 3466778
Q ss_pred HHHHHHHHHcCCcEEEEe
Q psy13219 89 LQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 89 ~~ll~RAe~AG~~AlvvT 106 (193)
.++.++|+++|+.++++.
T Consensus 92 i~la~~A~~~Gadavlv~ 109 (313)
T 3dz1_A 92 RRLARLSMDAGAAGVMIA 109 (313)
T ss_dssp HHHHHHHHHHTCSEEEEC
T ss_pred HHHHHHHHHcCCCEEEEC
Confidence 889999999999999985
No 50
>1o5k_A DHDPS, dihydrodipicolinate synthase; TM1521, structural genomics, J protein structure initiative, joint center for structural G lyase; HET: MCL; 1.80A {Thermotoga maritima} SCOP: c.1.10.1 PDB: 3pb2_A 3pb0_A
Probab=66.91 E-value=17 Score=30.20 Aligned_cols=85 Identities=12% Similarity=0.074 Sum_probs=51.9
Q ss_pred CceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHH-------HhhC-CCCceEEEEEeecCHHH
Q psy13219 21 CPVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEV-------RAQN-PSTTLWLQMYIFKDRAL 87 (193)
Q Consensus 21 ~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei-------~~~~-~~~~~wfQlY~~~dr~~ 87 (193)
.|.++.|+- .+-++.++=..+++-..+.|+- ++++|.+ +.|.||= .+.. +..+...++- ..+-+.
T Consensus 18 ~~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg-~~st~~ 95 (306)
T 1o5k_A 18 GTAIVTPFK-NGELDLESYERLVRYQLENGVNALIVLGTTGESPTVNEDEREKLVSRTLEIVDGKIPVIVGAG-TNSTEK 95 (306)
T ss_dssp EEECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHH
T ss_pred eeeeecCcC-CCCcCHHHHHHHHHHHHHcCCCEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEcCC-CccHHH
Confidence 355667776 5555666656777766666763 3445433 4454433 2222 2334455442 235567
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q psy13219 88 SLQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvTV 107 (193)
+.++.+.|+++|+.++++..
T Consensus 96 ai~la~~A~~~Gadavlv~~ 115 (306)
T 1o5k_A 96 TLKLVKQAEKLGANGVLVVT 115 (306)
T ss_dssp HHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 78899999999999999983
No 51
>3b4u_A Dihydrodipicolinate synthase; structural genomics, PSI-2, MC protein structure initiative, midwest center for structural genomics; 1.20A {Agrobacterium tumefaciens str}
Probab=64.87 E-value=37 Score=27.94 Aligned_cols=85 Identities=12% Similarity=0.047 Sum_probs=50.7
Q ss_pred ceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHH-------HhhCC-CCceEEEEEeecCHHHH
Q psy13219 22 PVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEV-------RAQNP-STTLWLQMYIFKDRALS 88 (193)
Q Consensus 22 P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei-------~~~~~-~~~~wfQlY~~~dr~~~ 88 (193)
|.++.|+--.+-++.++=..+++-..+.|+- ++.+|.+ +.|.||- .+... ..+...++- ..+-+.+
T Consensus 9 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 87 (294)
T 3b4u_A 9 AALTTPFKTDGTVDIDAMIAHARRCLSNGCDSVTLFGTTGEGCSVGSRERQAILSSFIAAGIAPSRIVTGVL-VDSIEDA 87 (294)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHTTCCGGGEEEEEC-CSSHHHH
T ss_pred EEEECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CccHHHH
Confidence 5556676433434555555666666666763 3445543 4455443 22332 234555543 2355678
Q ss_pred HHHHHHHHHcCCcEEEEee
Q psy13219 89 LQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 89 ~~ll~RAe~AG~~AlvvTV 107 (193)
.++.+.|+++|+.++++..
T Consensus 88 i~la~~A~~~Gadavlv~~ 106 (294)
T 3b4u_A 88 ADQSAEALNAGARNILLAP 106 (294)
T ss_dssp HHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 8899999999999999883
No 52
>2r91_A 2-keto-3-deoxy-(6-phospho-)gluconate aldolase; TIM barrel, thermophilic, lyase; 2.00A {Thermoproteus tenax} PDB: 2r94_A
Probab=64.17 E-value=27 Score=28.65 Aligned_cols=85 Identities=11% Similarity=0.028 Sum_probs=51.4
Q ss_pred ceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHH-------HhhCCCCceEEEEEeecCHHHHH
Q psy13219 22 PVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEV-------RAQNPSTTLWLQMYIFKDRALSL 89 (193)
Q Consensus 22 P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei-------~~~~~~~~~wfQlY~~~dr~~~~ 89 (193)
|.++.|+- .+-++.++=..+++-.-+.|+- ++++|.+ +.|.||- .+... + ...++- ..+-+.+.
T Consensus 5 ~a~vTPf~-dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~-g-vi~Gvg-~~~t~~ai 80 (286)
T 2r91_A 5 APVITTFR-GGRLDPELFANHVKNITSKGVDVVFVAGTTGLGPALSLQEKMELTDAATSAAR-R-VIVQVA-SLNADEAI 80 (286)
T ss_dssp EECCCCEE-TTEECHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHHHHCS-S-EEEECC-CSSHHHHH
T ss_pred EeEecCcC-CCccCHHHHHHHHHHHHHCCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-C-EEEeeC-CCCHHHHH
Confidence 55667776 5555666556666666666664 3445543 3454433 33333 3 333332 23556778
Q ss_pred HHHHHHHHcCCcEEEEeeccCCC
Q psy13219 90 QMVQRAERSGYSAIVITMDTAVL 112 (193)
Q Consensus 90 ~ll~RAe~AG~~AlvvTVD~pv~ 112 (193)
++.++|+++|+.++++. +|..
T Consensus 81 ~la~~A~~~Gadavlv~--~P~y 101 (286)
T 2r91_A 81 ALAKYAESRGAEAVASL--PPYY 101 (286)
T ss_dssp HHHHHHHHTTCSEEEEC--CSCS
T ss_pred HHHHHHHhcCCCEEEEc--CCcC
Confidence 89999999999999988 4544
No 53
>3qze_A DHDPS, dihydrodipicolinate synthase; alpha beta barrel, cytoplasmic; 1.59A {Pseudomonas aeruginosa} PDB: 3puo_A* 3noe_A 3ps7_A* 3s8h_A
Probab=64.08 E-value=25 Score=29.38 Aligned_cols=86 Identities=12% Similarity=-0.002 Sum_probs=51.1
Q ss_pred CceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHH-------HhhC-CCCceEEEEEeecCHHH
Q psy13219 21 CPVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEV-------RAQN-PSTTLWLQMYIFKDRAL 87 (193)
Q Consensus 21 ~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei-------~~~~-~~~~~wfQlY~~~dr~~ 87 (193)
.|.++.|+--.+-++.++=..+++-.-+.|+- ++.+|.+ +.|.||- .+.. +..+...++- ..+-+.
T Consensus 28 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~st~e 106 (314)
T 3qze_A 28 MVALVTPFDAQGRLDWDSLAKLVDFHLQEGTNAIVAVGTTGESATLDVEEHIQVIRRVVDQVKGRIPVIAGTG-ANSTRE 106 (314)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred EEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHH
Confidence 35666776544444555555666666666653 4444443 3444433 2222 3334455443 235667
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q psy13219 88 SLQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvTV 107 (193)
+.++.+.|+++|+.++++..
T Consensus 107 ai~la~~A~~~Gadavlv~~ 126 (314)
T 3qze_A 107 AVALTEAAKSGGADACLLVT 126 (314)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcC
Confidence 88899999999999999973
No 54
>1ka9_F Imidazole glycerol phosphtate synthase; riken structural genomics/proteomics initiative, RSGI, structural genomics, transferase; 2.30A {Thermus thermophilus} SCOP: c.1.2.1
Probab=64.01 E-value=21 Score=28.11 Aligned_cols=21 Identities=24% Similarity=0.471 Sum_probs=16.5
Q ss_pred CCHHHHHHHHhcCCCCEEEec
Q psy13219 171 VDWDDVRSLVQATKLPIVCKG 191 (193)
Q Consensus 171 ~tW~di~wlr~~~~lPivlKG 191 (193)
.+|+-++++++..+.|++.=|
T Consensus 183 ~~~~~i~~l~~~~~ipvia~G 203 (252)
T 1ka9_F 183 YDLRLTRMVAEAVGVPVIASG 203 (252)
T ss_dssp CCHHHHHHHHHHCSSCEEEES
T ss_pred CCHHHHHHHHHHcCCCEEEeC
Confidence 468888888888888887643
No 55
>2v9d_A YAGE; dihydrodipicolinic acid synthase, N-acetyl neuraminate lyase, NAL, lyase, DHDPS, prophage; 2.15A {Escherichia coli} PDB: 2v8z_A 3nev_A* 3n2x_A*
Probab=63.80 E-value=35 Score=28.90 Aligned_cols=86 Identities=13% Similarity=0.061 Sum_probs=50.5
Q ss_pred CceeecchhccccCCchHHHHHHHHHhccCc--eeeeccCc---cccHHHH-------HhhC-CCCceEEEEEeecCHHH
Q psy13219 21 CPVGIAPSAMQKLAHADGEVATARAAGMMDA--IMILSLMS---TTSLEEV-------RAQN-PSTTLWLQMYIFKDRAL 87 (193)
Q Consensus 21 ~P~~iaP~g~~~l~~~~gE~~~araA~~~g~--~~~lst~s---s~s~eei-------~~~~-~~~~~wfQlY~~~dr~~ 87 (193)
.|.++.|+--.+-++.++=..+++-..+.|+ .++++|.+ +.|.||- .+.. +..+...++- ..+-+.
T Consensus 36 ~~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~e 114 (343)
T 2v9d_A 36 IPPVSTIFTADGQLDKPGTAALIDDLIKAGVDGLFFLGSGGEFSQLGAEERKAIARFAIDHVDRRVPVLIGTG-GTNARE 114 (343)
T ss_dssp CCEECCCBCTTSSBCHHHHHHHHHHHHHTTCSCEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-SSCHHH
T ss_pred EEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHH
Confidence 3556677643333455554566665556665 34455543 3454433 2222 3334455443 235567
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q psy13219 88 SLQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvTV 107 (193)
+.++.+.|+++|+.++++..
T Consensus 115 ai~la~~A~~~Gadavlv~~ 134 (343)
T 2v9d_A 115 TIELSQHAQQAGADGIVVIN 134 (343)
T ss_dssp HHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 78899999999999999883
No 56
>1jvn_A Glutamine, bifunctional histidine biosynthesis protein hishf; substrate channeling, amidotransferase, TIM-barrel AS A SUBS tunnel; HET: 143; 2.10A {Saccharomyces cerevisiae} SCOP: c.1.2.1 c.23.16.1 PDB: 1ox4_B* 1ox5_A* 1ox6_A 1ox4_A
Probab=63.76 E-value=15 Score=33.32 Aligned_cols=32 Identities=22% Similarity=0.331 Sum_probs=24.1
Q ss_pred eEEEEEeecCHH----HHHHHHHHHHHcCCcEEEEe
Q psy13219 75 LWLQMYIFKDRA----LSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 75 ~wfQlY~~~dr~----~~~~ll~RAe~AG~~AlvvT 106 (193)
.||++|...=++ ...++.++++++|+..|++|
T Consensus 437 ~~~~v~~~Gw~~~~~~~~~e~a~~~~~~Ga~~il~t 472 (555)
T 1jvn_A 437 CWYQCTIKGGRESRDLGVWELTRACEALGAGEILLN 472 (555)
T ss_dssp EEEEEEETTTTEEEEEEHHHHHHHHHHTTCCEEEEC
T ss_pred eeEEEEEecCccCCCCCHHHHHHHHHHcCCCEEEEe
Confidence 488888754222 24579999999999999875
No 57
>1xky_A Dihydrodipicolinate synthase; TIM barrel, , lysine biosynthesis;spine, lyase; 1.94A {Bacillus anthracis} SCOP: c.1.10.1 PDB: 1xl9_A 3hij_A*
Probab=63.20 E-value=33 Score=28.36 Aligned_cols=85 Identities=9% Similarity=0.028 Sum_probs=49.9
Q ss_pred ceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHH-------HhhC-CCCceEEEEEeecCHHHH
Q psy13219 22 PVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEV-------RAQN-PSTTLWLQMYIFKDRALS 88 (193)
Q Consensus 22 P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei-------~~~~-~~~~~wfQlY~~~dr~~~ 88 (193)
|-++.|+--.+-++.++=..+++-..+.|+- ++++|.+ +.|.||- .+.. +..+...++- ..+-+.+
T Consensus 18 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~a 96 (301)
T 1xky_A 18 TAMVTPFDINGNIDFAKTTKLVNYLIDNGTTAIVVGGTTGESPTLTSEEKVALYRHVVSVVDKRVPVIAGTG-SNNTHAS 96 (301)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHH
T ss_pred EeeECcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCceEEeCCC-CCCHHHH
Confidence 4455666433334555555666666666763 3445543 4444433 2222 3344455543 2355677
Q ss_pred HHHHHHHHHcCCcEEEEee
Q psy13219 89 LQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 89 ~~ll~RAe~AG~~AlvvTV 107 (193)
.++.+.|+++|+.++++..
T Consensus 97 i~la~~A~~~Gadavlv~~ 115 (301)
T 1xky_A 97 IDLTKKATEVGVDAVMLVA 115 (301)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 8899999999999999874
No 58
>2uva_G Fatty acid synthase beta subunits; fungal, dehydratase, enoyl reductase, ketoacyl synthase, ketoacyl reductase; HET: FMN; 3.10A {Thermomyces lanuginosus} PDB: 2uvc_G*
Probab=63.17 E-value=17 Score=38.42 Aligned_cols=89 Identities=12% Similarity=0.064 Sum_probs=54.9
Q ss_pred eECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHHH-------hhC-CCCceEEEEEe-ec
Q psy13219 13 TVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVR-------AQN-PSTTLWLQMYI-FK 83 (193)
Q Consensus 13 ~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~-------~~~-~~~~~wfQlY~-~~ 83 (193)
+++| ..||+.|||+.. . .+-.+|.|++++|-.-+++.....+.|++. +.. ++.+.-+-+.. ..
T Consensus 578 ~~lg---~~PIi~a~M~~~-v----s~~~LaaAva~aGglG~i~g~g~~~~e~l~~~i~~vk~~~~~~~p~gvN~~~~~p 649 (2060)
T 2uva_G 578 RLLG---VPPVMVAGMTPT-T----VPWDFVAATMNAGYHIELAGGGYYNAQKMSDAISKIEKAIPPGRGITVNLIYVNP 649 (2060)
T ss_dssp HHHT---SCSEEECCCTTT-T----CSHHHHHHHHHTTCEECEEGGGCCSHHHHHHHHHHHGGGSCTTCCEEEEEETTCT
T ss_pred hccc---cceEEecCCCCc-c----ccHHHHHHHHHCCCEEEECcCCCCCHHHHHHHHHHHHhhcccCCCeEecccccCc
Confidence 4577 589999998732 1 244588899999998888555555655543 222 13333333332 22
Q ss_pred CH-HHHHHHHHHHHHcCCcE--EEEeecc
Q psy13219 84 DR-ALSLQMVQRAERSGYSA--IVITMDT 109 (193)
Q Consensus 84 dr-~~~~~ll~RAe~AG~~A--lvvTVD~ 109 (193)
+. +...++++.+.+.|+.. +.++.-.
T Consensus 650 ~~~~~~~~~~~~~~~~gv~i~gv~~~~G~ 678 (2060)
T 2uva_G 650 RAMGWQIPLLGRLRADGVPIEGLTIGAGV 678 (2060)
T ss_dssp THHHHHHHHHHHHHTTTCCEEEEEEESSC
T ss_pred ccchhHHHHHHHHHHcCCCcceEeecCCC
Confidence 21 22457899999999998 5554433
No 59
>1nh8_A ATP phosphoribosyltransferase; prtase, de novo His biosynthesis, PRPP, structural genomics, PSI, protei structure initiative; HET: AMP HIS; 1.80A {Mycobacterium tuberculosis H37RV} SCOP: c.94.1.1 d.58.5.3 PDB: 1nh7_A*
Probab=62.97 E-value=16 Score=30.90 Aligned_cols=61 Identities=15% Similarity=0.155 Sum_probs=48.3
Q ss_pred HhccCceeeeccCccccHHHHHhhCCC----------CceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 46 AGMMDAIMILSLMSTTSLEEVRAQNPS----------TTLWLQMYIFKDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 46 A~~~g~~~~lst~ss~s~eei~~~~~~----------~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
-.+.+-.|+.=+.....+|++.+..|+ ...|+.+...-++....+++.+-+++|+++|+++
T Consensus 227 l~A~~~~~l~~nvp~~~l~~v~~~lPg~~~PTVspL~~~~wvAV~~vv~~~~~~~~~~~Lk~~GA~~Ilv~ 297 (304)
T 1nh8_A 227 VFGQQYLMLDYDCPRSALKKATAITPGLESPTIAPLADPDWVAIRALVPRRDVNGIMDELAAIGAKAILAS 297 (304)
T ss_dssp HHHTTEEEEEEEEEGGGHHHHHHHCCCSSSCEEEECSSTTEEEEEEEEEGGGHHHHHHHHHHTTCEEEEEE
T ss_pred HHhcceEEEEEeCCHHHHHHHHHhccCCCCCeeeecCCCCeEEEEEEEcHHHHHHHHHHHHHcCCCeEEEe
Confidence 344556666666667789999887641 2349999999999999999999999999999886
No 60
>3cpr_A Dihydrodipicolinate synthetase; (beta/alpha)8-barrel fold with A C-terminal alpha-helical segment, amino-acid biosynthesis, cytoplasm; HET: MCL; 2.20A {Corynebacterium glutamicum}
Probab=62.58 E-value=36 Score=28.20 Aligned_cols=86 Identities=12% Similarity=0.049 Sum_probs=50.8
Q ss_pred CceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHH-------HhhC-CCCceEEEEEeecCHHH
Q psy13219 21 CPVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEV-------RAQN-PSTTLWLQMYIFKDRAL 87 (193)
Q Consensus 21 ~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei-------~~~~-~~~~~wfQlY~~~dr~~ 87 (193)
.|.++.|+--.+-++.++=..+++-.-+.|+- ++.+|.+ +.|.||= .+.. +..+...++- ..+-+.
T Consensus 21 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~st~~ 99 (304)
T 3cpr_A 21 GVAMVTPFTESGDIDIAAGREVAAYLVDKGLDSLVLAGTTGESPTTTAAEKLELLKAVREEVGDRAKLIAGVG-TNNTRT 99 (304)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTTTTSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSCHHH
T ss_pred EEeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEecCC-CCCHHH
Confidence 35556676433434555555666666666763 3445443 4454433 2222 2334444442 235567
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q psy13219 88 SLQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvTV 107 (193)
+.++.+.|+++|+.++++..
T Consensus 100 ai~la~~A~~~Gadavlv~~ 119 (304)
T 3cpr_A 100 SVELAEAAASAGADGLLVVT 119 (304)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 88899999999999999883
No 61
>2jz7_A Selenium binding protein; NMR {Methanococcus vannielii}
Probab=62.55 E-value=7.2 Score=26.66 Aligned_cols=26 Identities=8% Similarity=0.217 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHHcCCcEEE-EeeccC
Q psy13219 85 RALSLQMVQRAERSGYSAIV-ITMDTA 110 (193)
Q Consensus 85 r~~~~~ll~RAe~AG~~Alv-vTVD~p 110 (193)
++..++|.++|++.|+.|++ +-+|+.
T Consensus 34 ~~A~~rm~e~A~~lGAnAVVgvr~d~~ 60 (81)
T 2jz7_A 34 DEIVENLRKQVKAKGGMGLIAFRITCA 60 (81)
T ss_dssp HHHHHHHHHHHHHTTCCEEECCCCCCC
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEEcc
Confidence 35678999999999999965 334443
No 62
>2wkj_A N-acetylneuraminate lyase; directed evolution, sialic acid mimetics, aldolase, S base, carbohydrate metabolism, N-acetylneuraminic acid LYAS; HET: KPI PYR; 1.45A {Escherichia coli} PDB: 2wnq_A 2xfw_A* 2wpb_A* 2wnz_A* 2ygy_A* 2wo5_A* 2wnn_A* 3lbm_A 3lbc_A 3lcf_A 3lcl_A 3lcg_A 3lch_A 3lci_A 1hl2_A 1fdy_A 1fdz_A 1nal_1 3lcx_A 3lcw_A
Probab=61.19 E-value=37 Score=28.07 Aligned_cols=85 Identities=15% Similarity=0.084 Sum_probs=50.0
Q ss_pred ceeecchhccccCCchHHHHHHHHHhccCc--eeeeccCc---cccHHHH-------HhhC-CCCceEEEEEeecCHHHH
Q psy13219 22 PVGIAPSAMQKLAHADGEVATARAAGMMDA--IMILSLMS---TTSLEEV-------RAQN-PSTTLWLQMYIFKDRALS 88 (193)
Q Consensus 22 P~~iaP~g~~~l~~~~gE~~~araA~~~g~--~~~lst~s---s~s~eei-------~~~~-~~~~~wfQlY~~~dr~~~ 88 (193)
|.++.|+--.+-++.++=..+++-.-+.|+ .++++|.+ +.|.||- .+.. +..+...++- ..+-+.+
T Consensus 17 ~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~grvpViaGvg-~~~t~~a 95 (303)
T 2wkj_A 17 AALLTPFDQQQALDKASLRRLVQFNIQQGIDGLYVGGSTGEAFVQSLSEREQVLEIVAEEAKGKIKLIAHVG-CVSTAES 95 (303)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSSHHHH
T ss_pred EeeEcCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECeeccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHH
Confidence 455677643444455555566666666666 33445543 4454433 2222 3334444442 2355677
Q ss_pred HHHHHHHHHcCCcEEEEee
Q psy13219 89 LQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 89 ~~ll~RAe~AG~~AlvvTV 107 (193)
.++.+.|+++|+.++++..
T Consensus 96 i~la~~A~~~Gadavlv~~ 114 (303)
T 2wkj_A 96 QQLAASAKRYGFDAVSAVT 114 (303)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhCCCCEEEecC
Confidence 8899999999999999883
No 63
>3m5v_A DHDPS, dihydrodipicolinate synthase; TIM barrel, csgid, amino-acid biosynthesis, diaminopimelate biosynthesis, lyase, lysine biosynthesis; HET: MSE; 1.80A {Campylobacter jejuni} SCOP: c.1.10.0 PDB: 3ler_A*
Probab=60.79 E-value=30 Score=28.61 Aligned_cols=84 Identities=10% Similarity=-0.043 Sum_probs=51.6
Q ss_pred ceeecchhccccCCchHHHHHHHHHhccCcee--eeccCc---cccHHHH-------HhhC-C-CCceEEEEEeecCHHH
Q psy13219 22 PVGIAPSAMQKLAHADGEVATARAAGMMDAIM--ILSLMS---TTSLEEV-------RAQN-P-STTLWLQMYIFKDRAL 87 (193)
Q Consensus 22 P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~--~lst~s---s~s~eei-------~~~~-~-~~~~wfQlY~~~dr~~ 87 (193)
|.++.|+ -.+-++.++=..+.+-.-+.|+-- +.+|.+ +.|.||- .+.. + ..+...++- ..+-+.
T Consensus 14 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~g~rvpviaGvg-~~~t~~ 91 (301)
T 3m5v_A 14 TALITPF-KNGKVDEQSYARLIKRQIENGIDAVVPVGTTGESATLTHEEHRTCIEIAVETCKGTKVKVLAGAG-SNATHE 91 (301)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCCEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEEECC-CSSHHH
T ss_pred EeeecCc-CCCCCCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCCeEEEeCC-CCCHHH
Confidence 5566777 455456666567777666677643 344443 3444433 2222 2 234455442 345677
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q psy13219 88 SLQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvTV 107 (193)
+.++.++|+++|+.++++..
T Consensus 92 ai~la~~a~~~Gadavlv~~ 111 (301)
T 3m5v_A 92 AVGLAKFAKEHGADGILSVA 111 (301)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcC
Confidence 88999999999999999973
No 64
>1f6k_A N-acetylneuraminate lyase; beta barrel; 1.60A {Haemophilus influenzae} SCOP: c.1.10.1 PDB: 1f5z_A 1f6p_A 1f73_A* 1f74_A* 1f7b_A*
Probab=60.48 E-value=36 Score=27.93 Aligned_cols=85 Identities=13% Similarity=0.039 Sum_probs=49.6
Q ss_pred ceeecchhccccCCchHHHHHHHHHhc-cCce--eeeccCc---cccHHHH-------HhhC-CCCceEEEEEeecCHHH
Q psy13219 22 PVGIAPSAMQKLAHADGEVATARAAGM-MDAI--MILSLMS---TTSLEEV-------RAQN-PSTTLWLQMYIFKDRAL 87 (193)
Q Consensus 22 P~~iaP~g~~~l~~~~gE~~~araA~~-~g~~--~~lst~s---s~s~eei-------~~~~-~~~~~wfQlY~~~dr~~ 87 (193)
|.++.|+--.+-++.++=..+++-..+ .|+- ++.+|.+ +.|.||- .+.. +..+...++- ..+-+.
T Consensus 9 ~a~vTPf~~dg~iD~~~l~~lv~~li~~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 87 (293)
T 1f6k_A 9 SALLVSFNEDGTINEKGLRQIIRHNIDKMKVDGLYVGGSTGENFMLSTEEKKEIFRIAKDEAKDQIALIAQVG-SVNLKE 87 (293)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTSCCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEECC-CSCHHH
T ss_pred EeeEcCCCCCCCcCHHHHHHHHHHHHhhCCCcEEEeCccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEecC-CCCHHH
Confidence 555667643344455554566666666 6763 3445443 4454443 2222 2334444432 235567
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q psy13219 88 SLQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvTV 107 (193)
+.++.+.|+++|+.++++..
T Consensus 88 ai~la~~a~~~Gadavlv~~ 107 (293)
T 1f6k_A 88 AVELGKYATELGYDCLSAVT 107 (293)
T ss_dssp HHHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 78899999999999999883
No 65
>2r14_A Morphinone reductase; H-tunnelling, flavoprotein, NADH, hydride transfer, oxidoreductase; HET: FMN TXD; 1.40A {Pseudomonas putida} PDB: 3gx9_A* 1gwj_A*
Probab=60.09 E-value=71 Score=27.33 Aligned_cols=20 Identities=15% Similarity=-0.059 Sum_probs=17.3
Q ss_pred CHHHHHHHHhcCCCCEEEec
Q psy13219 172 DWDDVRSLVQATKLPIVCKG 191 (193)
Q Consensus 172 tW~di~wlr~~~~lPivlKG 191 (193)
.|+-++++|+.++.||+.=|
T Consensus 287 ~~~~~~~ik~~~~iPvi~~G 306 (377)
T 2r14_A 287 PEGFREQMRQRFKGGLIYCG 306 (377)
T ss_dssp CTTHHHHHHHHCCSEEEEES
T ss_pred hHHHHHHHHHHCCCCEEEEC
Confidence 68889999999999998754
No 66
>1x60_A Sporulation-specific N-acetylmuramoyl-L-alanine amidase; CWLC, CWLCR, peptidoglycan, cell WALL lytic amidase, tandem repeats, hydrolase; NMR {Bacillus subtilis}
Probab=59.93 E-value=20 Score=23.20 Aligned_cols=33 Identities=27% Similarity=0.391 Sum_probs=26.6
Q ss_pred ceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 74 TLWLQMYIFKDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 74 ~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
....++=.+.|++...+++++.++.|+.+++++
T Consensus 45 ~yRV~vGpf~~~~~A~~~~~~L~~~g~~~~iv~ 77 (79)
T 1x60_A 45 LYKVQIGAFSSKDNADTLAARAKNAGFDAIVIL 77 (79)
T ss_dssp EEEEEEEEESSHHHHHHHHHHHHHHTSCCEEEE
T ss_pred EEEEEECCcCCHHHHHHHHHHHHHcCCceEEEe
Confidence 344555557899999999999999999998875
No 67
>3h5d_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, schiff base, cytoplasm, diaminopimelate biosy lyase; HET: MES; 1.99A {Streptococcus pneumoniae}
Probab=59.85 E-value=59 Score=27.01 Aligned_cols=85 Identities=14% Similarity=0.016 Sum_probs=52.1
Q ss_pred ceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHH-------HhhC-CCCceEEEEEeecCHHHH
Q psy13219 22 PVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEV-------RAQN-PSTTLWLQMYIFKDRALS 88 (193)
Q Consensus 22 P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei-------~~~~-~~~~~wfQlY~~~dr~~~ 88 (193)
|.++.|+--.+-++.++=..+++-..+.|+- ++.+|.+ +.|.||- .+.. +..+.+.++- ..+-+.+
T Consensus 13 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpViaGvg-~~~t~~a 91 (311)
T 3h5d_A 13 TAFITPFHEDGSINFDAIPALIEHLLAHHTDGILLAGTTAESPTLTHDEELELFAAVQKVVNGRVPLIAGVG-TNDTRDS 91 (311)
T ss_dssp EECCCCBCTTSSBCTTHHHHHHHHHHHTTCCCEEESSTTTTGGGSCHHHHHHHHHHHHHHSCSSSCEEEECC-CSSHHHH
T ss_pred EeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHH
Confidence 5566776544445666666777776677763 4445443 3444433 2333 2334455442 3356678
Q ss_pred HHHHHHHHHcCC-cEEEEee
Q psy13219 89 LQMVQRAERSGY-SAIVITM 107 (193)
Q Consensus 89 ~~ll~RAe~AG~-~AlvvTV 107 (193)
.++.++|+++|+ .++++..
T Consensus 92 i~la~~A~~~Ga~davlv~~ 111 (311)
T 3h5d_A 92 IEFVKEVAEFGGFAAGLAIV 111 (311)
T ss_dssp HHHHHHHHHSCCCSEEEEEC
T ss_pred HHHHHHHHhcCCCcEEEEcC
Confidence 889999999996 9998874
No 68
>1vr4_A Hypothetical protein APC22750; structural genomics, pentamer, PSI, PR structure initiative, the midwest center for structural GEN MCSG; 2.09A {Bacillus cereus} SCOP: d.230.5.1 PDB: 2gtc_A
Probab=59.71 E-value=8 Score=27.42 Aligned_cols=29 Identities=28% Similarity=0.325 Sum_probs=22.1
Q ss_pred HHHHHHHHHHHHHcCCcEEE-EeeccCCCC
Q psy13219 85 RALSLQMVQRAERSGYSAIV-ITMDTAVLG 113 (193)
Q Consensus 85 r~~~~~ll~RAe~AG~~Alv-vTVD~pv~G 113 (193)
++..++|.++|++.|+.|++ +.+|....|
T Consensus 59 ~~A~~rm~~~A~~lGAnAVVgvr~d~~~i~ 88 (103)
T 1vr4_A 59 DIAMDEMKELAKQKGANAIVGVDVDYEVVR 88 (103)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEEEEEEEEG
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEEeeeeC
Confidence 45678899999999999965 666665443
No 69
>2l82_A Designed protein OR32; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=59.39 E-value=9.2 Score=27.96 Aligned_cols=37 Identities=19% Similarity=0.283 Sum_probs=28.2
Q ss_pred eecCHHHHHHHHHHHHHcCCcEEEEeeccCCCCCchh
Q psy13219 81 IFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYR 117 (193)
Q Consensus 81 ~~~dr~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~ 117 (193)
+..|+++.+++++..++.|++.+.+--|.----+|||
T Consensus 8 fssdpeilkeivreikrqgvrvvllysdqdekrrrer 44 (162)
T 2l82_A 8 FSSDPEILKEIVREIKRQGVRVVLLYSDQDEKRRRER 44 (162)
T ss_dssp EESCHHHHHHHHHHHHHTTCEEEEEECCSCHHHHHHH
T ss_pred ecCCHHHHHHHHHHHHhCCeEEEEEecCchHHHHHHH
Confidence 4778888888888888888888888887654444443
No 70
>4dpp_A DHDPS 2, dihydrodipicolinate synthase 2, chloroplastic; amino-acid biosynthesis, (S)-lysine biosynthesis VIA DAP PAT (beta/alpha)8-barrel; 2.00A {Arabidopsis thaliana} PDB: 4dpq_A* 3tuu_A*
Probab=59.13 E-value=45 Score=28.69 Aligned_cols=85 Identities=8% Similarity=-0.117 Sum_probs=50.1
Q ss_pred CceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHH-------HhhC-CCCceEEEEEeecCHHH
Q psy13219 21 CPVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEV-------RAQN-PSTTLWLQMYIFKDRAL 87 (193)
Q Consensus 21 ~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei-------~~~~-~~~~~wfQlY~~~dr~~ 87 (193)
.|-++.|+--.+-++.++=..+++-.-+.|+- ++++|.+ +.|.||= .+.. +..+...++- ..+-+.
T Consensus 64 ~~alvTPF~~dg~ID~~al~~lv~~li~~Gv~Gl~v~GTTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~e 142 (360)
T 4dpp_A 64 ITAIKTPYLPDGRFDLEAYDDLVNIQIQNGAEGVIVGGTTGEGQLMSWDEHIMLIGHTVNCFGGSIKVIGNTG-SNSTRE 142 (360)
T ss_dssp EEECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTTSEEEEECC-CSSHHH
T ss_pred EEEEeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEecccccChhhCCHHHHHHHHHHHHHHhCCCCeEEEecC-CCCHHH
Confidence 35566776544444555555666666666764 3444443 3444432 2222 2233344432 345677
Q ss_pred HHHHHHHHHHcCCcEEEEe
Q psy13219 88 SLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvT 106 (193)
+.++.++|+++|+.++++.
T Consensus 143 ai~la~~A~~~Gadavlvv 161 (360)
T 4dpp_A 143 AIHATEQGFAVGMHAALHI 161 (360)
T ss_dssp HHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHHHHHcCCCEEEEc
Confidence 8889999999999999987
No 71
>3glc_A Aldolase LSRF; TIM barrel, lyase, schiff base; HET: R5P; 2.50A {Escherichia coli} PDB: 3gnd_A* 3gkf_O
Probab=58.11 E-value=48 Score=27.60 Aligned_cols=86 Identities=17% Similarity=0.143 Sum_probs=50.7
Q ss_pred eCCceeecchhccccCCchHH--HHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHH
Q psy13219 19 YRCPVGIAPSAMQKLAHADGE--VATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAE 96 (193)
Q Consensus 19 ~~~P~~iaP~g~~~l~~~~gE--~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe 96 (193)
+.+|+++=+.-+..+. -+.| ...++.|.+.|.-++=-++...+++++.+..+ -+...+==...+.+...++++.|-
T Consensus 170 ~GlpvIie~~~G~~~~-~d~e~i~~aariA~elGAD~VKt~~t~e~~~~vv~~~~-vPVv~~GG~~~~~~~~l~~v~~ai 247 (295)
T 3glc_A 170 VGMPTMAVTGVGKDMV-RDQRYFSLATRIAAEMGAQIIKTYYVEKGFERIVAGCP-VPIVIAGGKKLPEREALEMCWQAI 247 (295)
T ss_dssp TTCCEEEEECC----C-CSHHHHHHHHHHHHHTTCSEEEEECCTTTHHHHHHTCS-SCEEEECCSCCCHHHHHHHHHHHH
T ss_pred cCCEEEEECCCCCccC-CCHHHHHHHHHHHHHhCCCEEEeCCCHHHHHHHHHhCC-CcEEEEECCCCCHHHHHHHHHHHH
Confidence 4577777331011111 2344 24778888888777655554467899987654 232222212235667778888888
Q ss_pred HcCCcEEEEe
Q psy13219 97 RSGYSAIVIT 106 (193)
Q Consensus 97 ~AG~~AlvvT 106 (193)
++|+..+++-
T Consensus 248 ~aGA~Gv~vG 257 (295)
T 3glc_A 248 DQGASGVDMG 257 (295)
T ss_dssp HTTCSEEEES
T ss_pred HhCCeEEEeH
Confidence 9999987764
No 72
>2nuw_A 2-keto-3-deoxygluconate/2-keto-3-deoxy-6-phospho aldolase; TIM barrel, lyase; 1.80A {Sulfolobus acidocaldarius dsm 639} PDB: 2nux_A 2nuy_A
Probab=56.87 E-value=41 Score=27.56 Aligned_cols=86 Identities=13% Similarity=0.021 Sum_probs=50.6
Q ss_pred ceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHHH-------hhCCCCceEEEEEeecCHHHHH
Q psy13219 22 PVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEVR-------AQNPSTTLWLQMYIFKDRALSL 89 (193)
Q Consensus 22 P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei~-------~~~~~~~~wfQlY~~~dr~~~~ 89 (193)
|.++.|+--.+-++.++=..+++-.-+.|+- ++.+|.+ +.|.||-. +... + ...++- ..+-+.+.
T Consensus 5 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~v~~~~~~~~~-g-ViaGvg-~~~t~~ai 81 (288)
T 2nuw_A 5 SPIITPFDKQGKVNVDALKTHAKNLLEKGIDAIFVNGTTGLGPALSKDEKRQNLNALYDVTH-K-LIFQVG-SLNLNDVM 81 (288)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEETSTTTTGGGSCHHHHHHHHHHHTTTCS-C-EEEECC-CSCHHHHH
T ss_pred EeeecCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhC-C-eEEeeC-CCCHHHHH
Confidence 4566776434444555555666666666764 3445443 44554432 2222 3 333331 23556778
Q ss_pred HHHHHHHHcCCcEEEEeeccCCC
Q psy13219 90 QMVQRAERSGYSAIVITMDTAVL 112 (193)
Q Consensus 90 ~ll~RAe~AG~~AlvvTVD~pv~ 112 (193)
++.+.|+++|+.++++. +|..
T Consensus 82 ~la~~A~~~Gadavlv~--~P~y 102 (288)
T 2nuw_A 82 ELVKFSNEMDILGVSSH--SPYY 102 (288)
T ss_dssp HHHHHHHTSCCSEEEEC--CCCS
T ss_pred HHHHHHHhcCCCEEEEc--CCcC
Confidence 89999999999999988 4544
No 73
>2r8w_A AGR_C_1641P; APC7498, dihydrodipicolinate synthase, agrobacterium tumefac C58, structural genomics, PSI-2; HET: MSE; 1.80A {Agrobacterium tumefaciens str}
Probab=56.16 E-value=44 Score=28.13 Aligned_cols=85 Identities=15% Similarity=0.069 Sum_probs=48.8
Q ss_pred ceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHH-------HhhC-CCCceEEEEEeecCHHHH
Q psy13219 22 PVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEV-------RAQN-PSTTLWLQMYIFKDRALS 88 (193)
Q Consensus 22 P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei-------~~~~-~~~~~wfQlY~~~dr~~~ 88 (193)
|.++.|+--.+-++.++=..+++-.-+.|+- ++++|.+ +.|.||- .+.. +..+...++- ..+-+.+
T Consensus 40 ~a~vTPF~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~ve~~~grvpViaGvg-~~st~ea 118 (332)
T 2r8w_A 40 AFPITPADEAGRVDIEAFSALIARLDAAEVDSVGILGSTGIYMYLTREERRRAIEAAATILRGRRTLMAGIG-ALRTDEA 118 (332)
T ss_dssp ECCCCCBCTTCCBCHHHHHHHHHHHHHHTCSEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC-CSSHHHH
T ss_pred EEeeCCcCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHHH
Confidence 4455665433334545445666655556653 3445443 4444433 2222 2344555543 2355667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q psy13219 89 LQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 89 ~~ll~RAe~AG~~AlvvTV 107 (193)
.++.+.|+++|+.++++..
T Consensus 119 i~la~~A~~~Gadavlv~~ 137 (332)
T 2r8w_A 119 VALAKDAEAAGADALLLAP 137 (332)
T ss_dssp HHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 8899999999999998873
No 74
>3qkb_A Uncharacterized protein; beta/alpha-propeller, structural genomics, joint center for structural genomics, JCSG; HET: MSE; 2.73A {Pediococcus pentosaceus}
Probab=56.15 E-value=10 Score=27.45 Aligned_cols=26 Identities=12% Similarity=0.198 Sum_probs=20.2
Q ss_pred HHHHHHHHHHHHHcCCcEEE-EeeccC
Q psy13219 85 RALSLQMVQRAERSGYSAIV-ITMDTA 110 (193)
Q Consensus 85 r~~~~~ll~RAe~AG~~Alv-vTVD~p 110 (193)
.+..++|+++|++.|+.|++ |-+|+-
T Consensus 61 ~eA~~rM~e~A~~lGANAVIgvrfdts 87 (111)
T 3qkb_A 61 DEAKQKLKKKADLLEGDGIIGLKYNTE 87 (111)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEEEEEE
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEEhh
Confidence 45677999999999999975 555554
No 75
>3l12_A Putative glycerophosphoryl diester phosphodiester; struct genomics, joint center for structural genomics, JCSG, prote structure initiative; HET: MSE; 1.60A {Silicibacter pomeroyi}
Probab=55.88 E-value=13 Score=30.83 Aligned_cols=70 Identities=14% Similarity=0.107 Sum_probs=46.8
Q ss_pred HHHHHHHhccCc--eeeeccCccccHHHHHhhCCCCceEEEEEee-----------------------------------
Q psy13219 40 VATARAAGMMDA--IMILSLMSTTSLEEVRAQNPSTTLWLQMYIF----------------------------------- 82 (193)
Q Consensus 40 ~~~araA~~~g~--~~~lst~ss~s~eei~~~~~~~~~wfQlY~~----------------------------------- 82 (193)
..+++.-.+.|. ..+++|+....++.+.+..|+-+.. +|+-.
T Consensus 168 ~~v~~~l~~~~~~~~v~i~SF~~~~l~~~~~~~p~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~ 246 (313)
T 3l12_A 168 AAVLADVRRYRMEPRTVMHSFDWALLGECRRQAPDLPTS-YLSQLPENADDPGEDSAKPVGPDYDRMTESLPQAVASAGG 246 (313)
T ss_dssp HHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSCEE-EEECCCC-------------CCCTTTCCSCHHHHHHHHTC
T ss_pred HHHHHHHHHcCCCCCEEEEcCCHHHHHHHHHHCCCCcEE-EEeccccccccccccccccccccchhccccHHHHHHHhCC
Confidence 355555555553 4788999988999998876643222 22211
Q ss_pred -----cCHHHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 83 -----KDRALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 83 -----~dr~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
.-...+.+++++|+++|.+..+.|||.+
T Consensus 247 ~~~~~~~~~~~~~~v~~~~~~Gl~V~~WTVn~~ 279 (313)
T 3l12_A 247 QLWCPYFLDVTPELVAEAHDLGLIVLTWTVNEP 279 (313)
T ss_dssp SEEEEBGGGCCHHHHHHHHHTTCEEEEBCCCSH
T ss_pred cEEecchhcCCHHHHHHHHHCCCEEEEEcCCCH
Confidence 1112346889999999999999999865
No 76
>3daq_A DHDPS, dihydrodipicolinate synthase; lysine biosynthesis, amino-ACI biosynthesis, diaminopimelate biosynthesis, lyase, schiff B; 1.45A {Staphylococcus aureus} SCOP: c.1.10.0 PDB: 3di1_A 3di0_A
Probab=55.39 E-value=37 Score=27.89 Aligned_cols=84 Identities=14% Similarity=0.035 Sum_probs=50.7
Q ss_pred ceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHH-------Hhh-CCCCceEEEEEeecCHHHH
Q psy13219 22 PVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEV-------RAQ-NPSTTLWLQMYIFKDRALS 88 (193)
Q Consensus 22 P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei-------~~~-~~~~~~wfQlY~~~dr~~~ 88 (193)
|.++.|+--. -++.++=..+++--.+.|+- ++.+|.+ +.|.||- .+. .+..+...++- ..+-+.+
T Consensus 9 ~a~vTPf~~d-~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Lt~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 86 (292)
T 3daq_A 9 VALTTPFTNN-KVNLEALKAHVNFLLENNAQAIIVNGTTAESPTLTTDEKELILKTVIDLVDKRVPVIAGTG-TNDTEKS 86 (292)
T ss_dssp EECCCCEETT-EECHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSCHHHH
T ss_pred EeeecCcCCC-CcCHHHHHHHHHHHHHcCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHHH
Confidence 5566776434 34656556666666666763 4444443 3444442 222 23344555542 3456778
Q ss_pred HHHHHHHHHcCCcEEEEee
Q psy13219 89 LQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 89 ~~ll~RAe~AG~~AlvvTV 107 (193)
.++.++|+++|+.++++..
T Consensus 87 i~la~~a~~~Gadavlv~~ 105 (292)
T 3daq_A 87 IQASIQAKALGADAIMLIT 105 (292)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECC
Confidence 8999999999999999873
No 77
>2q5c_A NTRC family transcriptional regulator; structural genomics, protein structure initiative; HET: SO4 GOL; 1.49A {Clostridium acetobutylicum atcc 824}
Probab=55.33 E-value=30 Score=26.80 Aligned_cols=81 Identities=11% Similarity=0.127 Sum_probs=51.7
Q ss_pred CceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccC-ccccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHH
Q psy13219 16 GTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLM-STTSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQR 94 (193)
Q Consensus 16 G~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~-ss~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~R 94 (193)
-+.++.|+.-=|+... |-=.++.+|-...+-.-+++.. -...++.+.+..+-. ++.|...+.+..++.+++
T Consensus 66 r~~~~iPVV~I~~s~~-----Dil~al~~a~~~~~kIavvg~~~~~~~~~~~~~ll~~~---i~~~~~~~~~e~~~~i~~ 137 (196)
T 2q5c_A 66 KKSVSIPSISIKVTRF-----DTMRAVYNAKRFGNELALIAYKHSIVDKHEIEAMLGVK---IKEFLFSSEDEITTLISK 137 (196)
T ss_dssp HTTCSSCEEEECCCHH-----HHHHHHHHHGGGCSEEEEEEESSCSSCHHHHHHHHTCE---EEEEEECSGGGHHHHHHH
T ss_pred HHhCCCCEEEEcCCHh-----HHHHHHHHHHhhCCcEEEEeCcchhhHHHHHHHHhCCc---eEEEEeCCHHHHHHHHHH
Confidence 3446777776554322 2224666665544433334332 344567676665422 677888999999999999
Q ss_pred HHHcCCcEEE
Q psy13219 95 AERSGYSAIV 104 (193)
Q Consensus 95 Ae~AG~~Alv 104 (193)
+++.||++++
T Consensus 138 l~~~G~~vvV 147 (196)
T 2q5c_A 138 VKTENIKIVV 147 (196)
T ss_dssp HHHTTCCEEE
T ss_pred HHHCCCeEEE
Confidence 9999999976
No 78
>3e96_A Dihydrodipicolinate synthase; structural genomics, nysgrc, target 9375C, operon, PSI-2; 1.80A {Bacillus clausii ksm-k16} SCOP: c.1.10.0
Probab=54.63 E-value=59 Score=27.00 Aligned_cols=88 Identities=15% Similarity=0.052 Sum_probs=55.6
Q ss_pred Cceeecchhc-cccCCchHHHHHHHHHhccCceeee--ccCc---cccHHHH-------HhhC-CCCceEEEEEeecCHH
Q psy13219 21 CPVGIAPSAM-QKLAHADGEVATARAAGMMDAIMIL--SLMS---TTSLEEV-------RAQN-PSTTLWLQMYIFKDRA 86 (193)
Q Consensus 21 ~P~~iaP~g~-~~l~~~~gE~~~araA~~~g~~~~l--st~s---s~s~eei-------~~~~-~~~~~wfQlY~~~dr~ 86 (193)
.|.++.|+-- .+-++.++=..+++-.-+.|+--++ +|.+ +.|.||= .+.. +..+....+- .+-+
T Consensus 16 ~~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~v~~~~v~~~~grvpViaGvg--~~t~ 93 (316)
T 3e96_A 16 SGIPITPFRKSDGSIDWHHYKETVDRIVDNGIDVIVPCGNTSEFYALSLEEAKEEVRRTVEYVHGRALVVAGIG--YATS 93 (316)
T ss_dssp EECCCCCBCTTTCCBCHHHHHHHHHHHHTTTCCEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEEC--SSHH
T ss_pred EEeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEEeC--cCHH
Confidence 3556677754 4445666656777777778875443 4332 3344432 2222 3345666663 3777
Q ss_pred HHHHHHHHHHHcCCcEEEEeeccCCC
Q psy13219 87 LSLQMVQRAERSGYSAIVITMDTAVL 112 (193)
Q Consensus 87 ~~~~ll~RAe~AG~~AlvvTVD~pv~ 112 (193)
.+.++.++|+++|+.++++. +|..
T Consensus 94 ~ai~la~~A~~~Gadavlv~--~P~y 117 (316)
T 3e96_A 94 TAIELGNAAKAAGADAVMIH--MPIH 117 (316)
T ss_dssp HHHHHHHHHHHHTCSEEEEC--CCCC
T ss_pred HHHHHHHHHHhcCCCEEEEc--CCCC
Confidence 88899999999999999986 4544
No 79
>3qfe_A Putative dihydrodipicolinate synthase family PROT; seattle structural genomics center for infectious disease, S coccidioides, valley fever; 2.35A {Coccidioides immitis}
Probab=53.83 E-value=41 Score=28.10 Aligned_cols=85 Identities=11% Similarity=0.021 Sum_probs=51.2
Q ss_pred ceeecchh-ccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHH-------Hhh-CCCCceEEEEEeecCHHH
Q psy13219 22 PVGIAPSA-MQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEV-------RAQ-NPSTTLWLQMYIFKDRAL 87 (193)
Q Consensus 22 P~~iaP~g-~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei-------~~~-~~~~~~wfQlY~~~dr~~ 87 (193)
|-++.|+- -.+-++.++=..+++-..+.|+- ++++|.+ +.|.||- .+. .+..+....+- ..+-..
T Consensus 16 ~a~vTPf~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 94 (318)
T 3qfe_A 16 CPAVTFFDSKTDTLDLASQERYYAYLARSGLTGLVILGTNAEAFLLTREERAQLIATARKAVGPDFPIMAGVG-AHSTRQ 94 (318)
T ss_dssp EECCCCEETTTTEECHHHHHHHHHHHHTTTCSEEEESSGGGTGGGSCHHHHHHHHHHHHHHHCTTSCEEEECC-CSSHHH
T ss_pred EeeeCCccCCCCCCCHHHHHHHHHHHHHcCCCEEEeCccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHH
Confidence 44566664 33434555556677777777774 4444443 3444433 222 23345555543 346677
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q psy13219 88 SLQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvTV 107 (193)
+.++.++|+++|+.++++..
T Consensus 95 ai~la~~a~~~Gadavlv~~ 114 (318)
T 3qfe_A 95 VLEHINDASVAGANYVLVLP 114 (318)
T ss_dssp HHHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHHHcCCCEEEEeC
Confidence 88999999999999998854
No 80
>1thf_D HISF protein; thermophIle, TIM-barrel, histidine biosynthesis, lyase, phosphate-binding sites; 1.45A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2wjz_A 2a0n_A* 1gpw_A 1vh7_A 2rkx_A 3iio_A 3iip_A* 3iiv_A
Probab=53.73 E-value=40 Score=26.38 Aligned_cols=22 Identities=32% Similarity=0.487 Sum_probs=16.6
Q ss_pred CCCHHHHHHHHhcCCCCEEEec
Q psy13219 170 SVDWDDVRSLVQATKLPIVCKG 191 (193)
Q Consensus 170 ~~tW~di~wlr~~~~lPivlKG 191 (193)
.++|+-++++++..+.|++.=|
T Consensus 181 g~~~~~~~~l~~~~~ipvia~G 202 (253)
T 1thf_D 181 GYDTEMIRFVRPLTTLPIIASG 202 (253)
T ss_dssp CCCHHHHHHHGGGCCSCEEEES
T ss_pred CCCHHHHHHHHHhcCCCEEEEC
Confidence 3578888888888888887644
No 81
>3lmz_A Putative sugar isomerase; structural genomics, joint center structural genomics, JCSG, protein structure initiative, PS isomerase; HET: MSE CIT PGE; 1.44A {Parabacteroides distasonis}
Probab=53.61 E-value=76 Score=24.58 Aligned_cols=89 Identities=11% Similarity=0.029 Sum_probs=48.1
Q ss_pred ceeCCceeecchhccccCCchHHHHHHHHHhccCceeeecc----CccccHHHHHhhCC-CCce--EEEEEeecCHHHHH
Q psy13219 17 TRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSL----MSTTSLEEVRAQNP-STTL--WLQMYIFKDRALSL 89 (193)
Q Consensus 17 ~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst----~ss~s~eei~~~~~-~~~~--wfQlY~~~dr~~~~ 89 (193)
....++++++......+ ..+.-+..++.++-.++-+.... .+...++++.+... .+.. -+..+..++.+..+
T Consensus 14 ~~~~~klg~~~~~~~~~-~~~~~l~~~~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~~~~~~~ 92 (257)
T 3lmz_A 14 AVNPFHLGMAGYTFVNF-DLDTTLKTLERLDIHYLCIKDFHLPLNSTDEQIRAFHDKCAAHKVTGYAVGPIYMKSEEEID 92 (257)
T ss_dssp CCCSSEEEECGGGGTTS-CHHHHHHHHHHTTCCEEEECTTTSCTTCCHHHHHHHHHHHHHTTCEEEEEEEEEECSHHHHH
T ss_pred CCCceEEEEEEEeecCC-CHHHHHHHHHHhCCCEEEEecccCCCCCCHHHHHHHHHHHHHcCCeEEEEeccccCCHHHHH
Confidence 34457788888776653 22222333333333333333321 12223445543321 1222 23334447888899
Q ss_pred HHHHHHHHcCCcEEEEe
Q psy13219 90 QMVQRAERSGYSAIVIT 106 (193)
Q Consensus 90 ~ll~RAe~AG~~AlvvT 106 (193)
+.++.|++.|++.|++.
T Consensus 93 ~~i~~A~~lGa~~v~~~ 109 (257)
T 3lmz_A 93 RAFDYAKRVGVKLIVGV 109 (257)
T ss_dssp HHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHhCCCEEEec
Confidence 99999999999999874
No 82
>1w3i_A EDA, 2-keto-3-deoxy gluconate aldolase; archaeal metabolism, pyruvate; 1.7A {Sulfolobus solfataricus} SCOP: c.1.10.1 PDB: 1w37_A 1w3n_A* 1w3t_A* 2yda_A*
Probab=53.61 E-value=50 Score=27.11 Aligned_cols=86 Identities=9% Similarity=-0.051 Sum_probs=49.6
Q ss_pred ceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHH-------HhhCCCCceEEEEEeecCHHHHH
Q psy13219 22 PVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEV-------RAQNPSTTLWLQMYIFKDRALSL 89 (193)
Q Consensus 22 P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei-------~~~~~~~~~wfQlY~~~dr~~~~ 89 (193)
|.++.|+--.+-++.++=..+++-..+.|+- ++++|.+ +.|.||- .+... + ...++- ..+-+.+.
T Consensus 5 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~eEr~~v~~~~~~~~~-g-viaGvg-~~~t~~ai 81 (293)
T 1w3i_A 5 TPIITPFTKDNRIDKEKLKIHAENLIRKGIDKLFVNGTTGLGPSLSPEEKLENLKAVYDVTN-K-IIFQVG-GLNLDDAI 81 (293)
T ss_dssp EECCCCBCTTSSBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHTTCS-C-EEEECC-CSCHHHHH
T ss_pred EEeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHcC-C-EEEecC-CCCHHHHH
Confidence 4556676433434555545666666666663 3445443 4455443 22222 3 333332 23556777
Q ss_pred HHHHHHHHcCCcEEEEeeccCCC
Q psy13219 90 QMVQRAERSGYSAIVITMDTAVL 112 (193)
Q Consensus 90 ~ll~RAe~AG~~AlvvTVD~pv~ 112 (193)
++.+.|+++|+.++++. +|..
T Consensus 82 ~la~~A~~~Gadavlv~--~P~y 102 (293)
T 1w3i_A 82 RLAKLSKDFDIVGIASY--APYY 102 (293)
T ss_dssp HHHHHGGGSCCSEEEEE--CCCS
T ss_pred HHHHHHHhcCCCEEEEc--CCCC
Confidence 89999999999999988 4544
No 83
>3qvq_A Phosphodiesterase OLEI02445; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta hydrolase, hydrolase; HET: MSE G3P; 1.60A {Oleispira antarctica}
Probab=53.12 E-value=17 Score=29.08 Aligned_cols=58 Identities=16% Similarity=0.225 Sum_probs=39.8
Q ss_pred eeeeccCccccHHHHHhhCCCCceEEEEE-------------------eecCHHHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 52 IMILSLMSTTSLEEVRAQNPSTTLWLQMY-------------------IFKDRALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 52 ~~~lst~ss~s~eei~~~~~~~~~wfQlY-------------------~~~dr~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
..++||+....++.+.+..|.-+.-+ |+ .+.....+.+++++|+++|.+..+-|||.+
T Consensus 145 ~vii~SF~~~~l~~~~~~~p~~~~~~-l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~~~~~G~~v~~WTvn~~ 221 (252)
T 3qvq_A 145 PLLFSSFNYFALVSAKALWPEIARGY-NVSAIPSAWQERLEHLDCAGLHIHQSFFDVQQVSDIKAAGYKVLAFTINDE 221 (252)
T ss_dssp CEEEEESCHHHHHHHHHHCTTSCEEE-ECSSCCTTHHHHHHHHTCSEEEEEGGGCCHHHHHHHHHTTCEEEEECCCCH
T ss_pred CEEEEeCCHHHHHHHHHHCCCCcEEE-EEecCchhHHHHHHHcCCeEEecchhhCCHHHHHHHHHCCCEEEEEcCCCH
Confidence 47889999999998887766433221 22 111223446788899999999999999865
No 84
>3sho_A Transcriptional regulator, RPIR family; structural genomics, PSI-biology, midwest center for structu genomics, MCSG; 1.80A {Sphaerobacter thermophilus}
Probab=52.69 E-value=51 Score=24.33 Aligned_cols=61 Identities=11% Similarity=0.104 Sum_probs=36.0
Q ss_pred ccCceeeeccCccccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEeec
Q psy13219 48 MMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMD 108 (193)
Q Consensus 48 ~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD 108 (193)
..|.+...-+.....+.+.......+...+=+-..+.-..+.+.++.|++.|++.|.||-.
T Consensus 63 ~~g~~~~~~~~~~~~~~~~~~~~~~~d~~i~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~ 123 (187)
T 3sho_A 63 SLGIRTTVLTEGGSTLTITLANLRPTDLMIGVSVWRYLRDTVAALAGAAERGVPTMALTDS 123 (187)
T ss_dssp HTTCCEEEECCCTHHHHHHHHTCCTTEEEEEECCSSCCHHHHHHHHHHHHTTCCEEEEESC
T ss_pred hcCCCEEEecCCchhHHHHHhcCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEeCC
Confidence 3565554433222222222222223344444555555667888999999999999999964
No 85
>2ojp_A DHDPS, dihydrodipicolinate synthase; dimer, lysine biosynthe lyase; HET: KGC GOL; 1.70A {Escherichia coli} PDB: 1yxc_A 1dhp_A 1yxd_A* 2ats_A* 3du0_A* 3c0j_A* 3ubs_A* 4eou_A* 3i7q_A* 3i7r_A* 3i7s_A* 2pur_A* 1s5v_A 1s5w_A 1s5t_A 3den_A* 2a6l_A 2a6n_A 3g0s_A
Probab=52.53 E-value=35 Score=28.05 Aligned_cols=85 Identities=9% Similarity=-0.040 Sum_probs=47.9
Q ss_pred ceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHH-------HhhC-CCCceEEEEEeecCHHHH
Q psy13219 22 PVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEV-------RAQN-PSTTLWLQMYIFKDRALS 88 (193)
Q Consensus 22 P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei-------~~~~-~~~~~wfQlY~~~dr~~~ 88 (193)
|.++.|+--.+-++.++=..+++-.-+.|+- ++++|.+ +.|.||- .+.. +..+...++- ..+-+.+
T Consensus 7 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 85 (292)
T 2ojp_A 7 VAIVTPMDEKGNVCRASLKKLIDYHVASGTSAIVSVGTTGESATLNHDEHADVVMMTLDLADGRIPVIAGTG-ANATAEA 85 (292)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred eeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHH
Confidence 4556676433434555545666655555653 3445443 3444433 2222 2334444442 2345667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q psy13219 89 LQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 89 ~~ll~RAe~AG~~AlvvTV 107 (193)
.++.+.|+++|+.++++..
T Consensus 86 i~la~~a~~~Gadavlv~~ 104 (292)
T 2ojp_A 86 ISLTQRFNDSGIVGCLTVT 104 (292)
T ss_dssp HHHHHHTTTSSCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEECC
Confidence 7899999999999998873
No 86
>1y2i_A Hypothetical protein S0862; structural genomics, pentamer, protein structure initiative, PSI, midwest center for structural genomics; 2.30A {Shigella flexneri 2a str} SCOP: d.230.5.1
Probab=51.55 E-value=11 Score=28.01 Aligned_cols=29 Identities=24% Similarity=0.315 Sum_probs=22.3
Q ss_pred HHHHHHHHHHHHHcCCcEEE-EeeccCCCC
Q psy13219 85 RALSLQMVQRAERSGYSAIV-ITMDTAVLG 113 (193)
Q Consensus 85 r~~~~~ll~RAe~AG~~Alv-vTVD~pv~G 113 (193)
++...+|.++|++.|+.||+ |.+|....|
T Consensus 83 ~~Al~rm~~~A~~lGAnAVVGvr~d~~~i~ 112 (133)
T 1y2i_A 83 EIAFEELGSQARALGADAVVGIDIDYETVG 112 (133)
T ss_dssp HHHHHHHHHHHHHHTCSEEEEEEEEEEEES
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEEeeeec
Confidence 45678899999999999965 666665444
No 87
>1jcn_A Inosine monophosphate dehydrogenase I; IMPD, IMPDH, guanine nucleotide synthesis, oxidoreductase; HET: CPR; 2.50A {Homo sapiens} SCOP: c.1.5.1 d.37.1.1 PDB: 1jr1_A* 1nf7_A* 1b3o_A* 1nfb_A*
Probab=51.49 E-value=9.3 Score=34.06 Aligned_cols=21 Identities=14% Similarity=0.167 Sum_probs=16.5
Q ss_pred CHHHHHHHHhcC-CCCEEEecC
Q psy13219 172 DWDDVRSLVQAT-KLPIVCKGI 192 (193)
Q Consensus 172 tW~di~wlr~~~-~lPivlKGI 192 (193)
.|+.|+++|+.+ +.||++|+|
T Consensus 283 ~~~~i~~i~~~~~~~pvi~~~v 304 (514)
T 1jcn_A 283 QIAMVHYIKQKYPHLQVIGGNV 304 (514)
T ss_dssp HHHHHHHHHHHCTTCEEEEEEE
T ss_pred HHHHHHHHHHhCCCCceEeccc
Confidence 467788888888 788888765
No 88
>3eb2_A Putative dihydrodipicolinate synthetase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI2., structural genomics; HET: PGE; 2.04A {Rhodopseudomonas palustris} SCOP: c.1.10.0
Probab=51.35 E-value=81 Score=25.94 Aligned_cols=87 Identities=10% Similarity=-0.017 Sum_probs=52.2
Q ss_pred CceeecchhccccCCchHHHHHHHHHhccCcee--eeccCc---cccHHHH-------Hhh-CCCCceEEEEEeecCHHH
Q psy13219 21 CPVGIAPSAMQKLAHADGEVATARAAGMMDAIM--ILSLMS---TTSLEEV-------RAQ-NPSTTLWLQMYIFKDRAL 87 (193)
Q Consensus 21 ~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~--~lst~s---s~s~eei-------~~~-~~~~~~wfQlY~~~dr~~ 87 (193)
.|.++.|+--.+-++.++=..+++--.+.|+-- +.+|.+ +.|.||- .+. .+..+...++- ..+-+.
T Consensus 9 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~ 87 (300)
T 3eb2_A 9 FPYLVSPVDAEGRVRADVMGRLCDDLIQAGVHGLTPLGSTGEFAYLGTAQREAVVRATIEAAQRRVPVVAGVA-STSVAD 87 (300)
T ss_dssp EEBCCCCBCTTSCBCHHHHHHHHHHHHHTTCSCBBTTSGGGTGGGCCHHHHHHHHHHHHHHHTTSSCBEEEEE-ESSHHH
T ss_pred EEEEeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHH
Confidence 355667765444445555556666666666533 334433 3455443 222 23345666654 345667
Q ss_pred HHHHHHHHHHcCCcEEEEeec
Q psy13219 88 SLQMVQRAERSGYSAIVITMD 108 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvTVD 108 (193)
+.++.++|+++|+.++++..=
T Consensus 88 ai~la~~a~~~Gadavlv~~P 108 (300)
T 3eb2_A 88 AVAQAKLYEKLGADGILAILE 108 (300)
T ss_dssp HHHHHHHHHHHTCSEEEEEEC
T ss_pred HHHHHHHHHHcCCCEEEEcCC
Confidence 788999999999999998653
No 89
>3a5f_A Dihydrodipicolinate synthase; TIM barrel, enzyme, amino-acid biosynthesis, cytoplasm, diaminopimelate biosynthesis, lyase; HET: KPI; 1.19A {Clostridium botulinum A} PDB: 3bi8_A* 3ird_A*
Probab=50.52 E-value=80 Score=25.79 Aligned_cols=85 Identities=13% Similarity=-0.009 Sum_probs=53.3
Q ss_pred CceeecchhccccCCchHHHHHHHHHhccCcee--eeccCc---cccHHHH-------HhhC-CCCceEEEEEeecCHHH
Q psy13219 21 CPVGIAPSAMQKLAHADGEVATARAAGMMDAIM--ILSLMS---TTSLEEV-------RAQN-PSTTLWLQMYIFKDRAL 87 (193)
Q Consensus 21 ~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~--~lst~s---s~s~eei-------~~~~-~~~~~wfQlY~~~dr~~ 87 (193)
.|.++.|+--.+ ++.++=..+++-.-+.|+-- +++|.+ +.|.||- .+.. +..+...++- ..+-+.
T Consensus 7 ~~a~vTPf~~dg-iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pvi~Gvg-~~~t~~ 84 (291)
T 3a5f_A 7 GVAIITPFTNTG-VDFDKLSELIEWHIKSKTDAIIVCGTTGEATTMTETERKETIKFVIDKVNKRIPVIAGTG-SNNTAA 84 (291)
T ss_dssp EEECCCCBCSSS-BCHHHHHHHHHHHHHTTCCEEEESSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHH
T ss_pred eeeeEcCcCCCC-cCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEeCC-cccHHH
Confidence 355677875556 67777667777666677643 445433 4454433 2222 2344455442 235567
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q psy13219 88 SLQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvTV 107 (193)
+.++.+.|+++|+.++++..
T Consensus 85 ai~la~~a~~~Gadavlv~~ 104 (291)
T 3a5f_A 85 SIAMSKWAESIGVDGLLVIT 104 (291)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEEcC
Confidence 78899999999999999983
No 90
>1zcc_A Glycerophosphodiester phosphodiesterase; NYSGXRC, agrobacterium tumefaciens STR. C58, structural genomics; 2.50A {Agrobacterium tumefaciens str} SCOP: c.1.18.3
Probab=49.41 E-value=36 Score=26.97 Aligned_cols=71 Identities=7% Similarity=0.077 Sum_probs=44.2
Q ss_pred HHHHHHHhccCc--eeeeccCccccHHHHHhhCCCCceEE-----------------EEEeecCHHH-HHHHHHHHHHcC
Q psy13219 40 VATARAAGMMDA--IMILSLMSTTSLEEVRAQNPSTTLWL-----------------QMYIFKDRAL-SLQMVQRAERSG 99 (193)
Q Consensus 40 ~~~araA~~~g~--~~~lst~ss~s~eei~~~~~~~~~wf-----------------QlY~~~dr~~-~~~ll~RAe~AG 99 (193)
..+++.-.+.+. ..++||+....++.+.+..|.-+..+ +.+.+.-... +.+++++++++|
T Consensus 115 ~~v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~~v~~~~~~G 194 (248)
T 1zcc_A 115 AKVAALVRHLGMVRDTFYFSFSEEMRQGLQSIAPEFRRMMTLDIAKSPSLVGAVHHASIIEITPAQMRRPGIIEASRKAG 194 (248)
T ss_dssp HHHHHHHHHHTCSTTEEEECSCHHHHHHHHHHCTTSEEEEEHHHHSSTHHHHHTTCCSEEEECHHHHHSHHHHHHHHHHT
T ss_pred HHHHHHHHHhCCCCCEEEEECCHHHHHHHHHHCCCCcEEEEecCCccHHHHHHHcCCCEEEecHHHhCCHHHHHHHHHCC
Confidence 344444444443 46778888778888776655322211 0111122233 578999999999
Q ss_pred CcEEEEeeccC
Q psy13219 100 YSAIVITMDTA 110 (193)
Q Consensus 100 ~~AlvvTVD~p 110 (193)
.+..+.|||.+
T Consensus 195 ~~v~~wTvn~~ 205 (248)
T 1zcc_A 195 LEIMVYYGGDD 205 (248)
T ss_dssp CEEEEECCCCC
T ss_pred CEEEEECCCCH
Confidence 99999999865
No 91
>3mz2_A Glycerophosphoryl diester phosphodiesterase; structural genomics, joint center for structural genomics; HET: MSE PE4; 1.55A {Parabacteroides distasonis}
Probab=49.22 E-value=32 Score=28.30 Aligned_cols=70 Identities=14% Similarity=0.108 Sum_probs=44.3
Q ss_pred HHHHHHhccCc--eeeeccCccccHHHHHhhCCCCceE----------------------EEEEeecCHHHHHHHHHHHH
Q psy13219 41 ATARAAGMMDA--IMILSLMSTTSLEEVRAQNPSTTLW----------------------LQMYIFKDRALSLQMVQRAE 96 (193)
Q Consensus 41 ~~araA~~~g~--~~~lst~ss~s~eei~~~~~~~~~w----------------------fQlY~~~dr~~~~~ll~RAe 96 (193)
.+++...+.|. ..+++|++...++.+.+..|.-+.- +..|-+.....+.+++++|.
T Consensus 146 ~v~~~l~~~~~~~~vii~Sf~~~~l~~~~~~~p~~~~~~l~~~~~~l~~~~~~g~~~~~~~~~~~~~~~~~~~~~V~~ah 225 (292)
T 3mz2_A 146 RTAQLITDMQAEPYVMITVHDGASARFFYEKNPNFMFEAFVKTKEAVQDYEDNGIPWSHIMAYVGPKITPEVREVIDMLH 225 (292)
T ss_dssp HHHHHHHHTTCTTTEEEEESSHHHHHHHHHHCTTCCEEEECCSHHHHHHHHHTTCCGGGEEEEEESSCCHHHHHHHHHHH
T ss_pred HHHHHHHHcCCCCCEEEEECCHHHHHHHHHHCCCCeEEEEeCCHHHHHHHHHhCCChhheeeeecccccccCHHHHHHHH
Confidence 34444444432 4667777777777776665532211 12222334456788999999
Q ss_pred HcCCcEEEEeeccC
Q psy13219 97 RSGYSAIVITMDTA 110 (193)
Q Consensus 97 ~AG~~AlvvTVD~p 110 (193)
++|.+..+.||+++
T Consensus 226 ~~G~~V~vWTv~t~ 239 (292)
T 3mz2_A 226 ERGVMCMISTAPSD 239 (292)
T ss_dssp HTTBCEEEECTTTG
T ss_pred HCCCEEEEEeCCCc
Confidence 99999999999875
No 92
>1jub_A Dihydroorotate dehydrogenase A; homodimer, alpha-beta barrel, flavoprotein, mutant enzyme, oxidoreductase; HET: FMN; 1.40A {Lactococcus lactis} SCOP: c.1.4.1 PDB: 1ovd_A* 1jue_A* 1dor_A* 2bsl_A* 2bx7_A* 2dor_A* 1jqv_A* 1jrb_A* 1jrc_A* 1jqx_A*
Probab=49.02 E-value=22 Score=29.14 Aligned_cols=35 Identities=9% Similarity=-0.047 Sum_probs=28.5
Q ss_pred CCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 72 STTLWLQMYIFKDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 72 ~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
+-+.+.-++..-|.+...++.++++++|+.+|.++
T Consensus 158 ~~Pv~vKi~~~~~~~~~~~~a~~~~~~G~d~i~v~ 192 (311)
T 1jub_A 158 TKPLGVKLPPYFDLVHFDIMAEILNQFPLTYVNSV 192 (311)
T ss_dssp CSCEEEEECCCCSHHHHHHHHHHHTTSCCCEEEEC
T ss_pred CCCEEEEECCCCCHHHHHHHHHHHHHcCCcEEEec
Confidence 34677777776677778888999999999999875
No 93
>1vr6_A Phospho-2-dehydro-3-deoxyheptonate aldolase; TM0343, structural genomics, joint center for STRU genomics, JCSG, protein structure initiative; 1.92A {Thermotoga maritima} SCOP: c.1.10.4 PDB: 1rzm_A* 3pg9_A* 3pg8_A*
Probab=48.20 E-value=32 Score=29.51 Aligned_cols=42 Identities=19% Similarity=0.201 Sum_probs=32.3
Q ss_pred chhccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhh
Q psy13219 27 PSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQ 69 (193)
Q Consensus 27 P~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~ 69 (193)
|-+++++ ..+|=..+.++|.+.|++++.+-+...+++.+++.
T Consensus 148 ~~~f~gl-g~egl~~l~~~~~e~Gl~~~te~~d~~~~~~l~~~ 189 (350)
T 1vr6_A 148 PYSFQGL-GEKGLEYLREAADKYGMYVVTEALGEDDLPKVAEY 189 (350)
T ss_dssp TTSCCCC-THHHHHHHHHHHHHHTCEEEEECSSGGGHHHHHHH
T ss_pred hHhhcCC-CHHHHHHHHHHHHHcCCcEEEEeCCHHHHHHHHHh
Confidence 4445555 24566788899999999999998888888888765
No 94
>3d0c_A Dihydrodipicolinate synthase; lysine biosynthesis, pyruvate, TIM barrel, NYSGXRC, PSI-2, structural genomics; 1.90A {Oceanobacillus iheyensis HTE831}
Probab=47.20 E-value=93 Score=25.78 Aligned_cols=84 Identities=13% Similarity=0.047 Sum_probs=50.6
Q ss_pred ceeecch-hccccCCchHHHHHHHHHhccCceee--eccCc---cccHHHH-------HhhC-CCCceEEEEEeecCHHH
Q psy13219 22 PVGIAPS-AMQKLAHADGEVATARAAGMMDAIMI--LSLMS---TTSLEEV-------RAQN-PSTTLWLQMYIFKDRAL 87 (193)
Q Consensus 22 P~~iaP~-g~~~l~~~~gE~~~araA~~~g~~~~--lst~s---s~s~eei-------~~~~-~~~~~wfQlY~~~dr~~ 87 (193)
|.++.|+ --.+-++.++=..+++-..+.|+--+ ++|.+ +.|.||= .+.. +..+...++-- +-+.
T Consensus 17 ~a~vTPF~~~dg~iD~~~l~~lv~~li~~Gv~gl~v~GtTGE~~~Ls~eEr~~vi~~~~~~~~grvpViaGvg~--st~~ 94 (314)
T 3d0c_A 17 GINIVPFLEGTREIDWKGLDDNVEFLLQNGIEVIVPNGNTGEFYALTIEEAKQVATRVTELVNGRATVVAGIGY--SVDT 94 (314)
T ss_dssp ECCCCCBCTTTCCBCHHHHHHHHHHHHHTTCSEECTTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSEEEEEECS--SHHH
T ss_pred EeeeccccCCCCCCCHHHHHHHHHHHHHcCCCEEEECcccCChhhCCHHHHHHHHHHHHHHhCCCCeEEecCCc--CHHH
Confidence 4556666 43344455555666666666776443 34432 4454433 2222 33455665543 6667
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q psy13219 88 SLQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvTV 107 (193)
+.++.+.|+++|+.++++..
T Consensus 95 ai~la~~A~~~Gadavlv~~ 114 (314)
T 3d0c_A 95 AIELGKSAIDSGADCVMIHQ 114 (314)
T ss_dssp HHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHHcCCCEEEECC
Confidence 88899999999999999873
No 95
>4ggj_A Mitochondrial cardiolipin hydrolase; piRNA pathway, protein-RNA interactions, piRNA RNAI, HKD MOT zinc finger, nuclease, nucleic acid binding; 1.75A {Mus musculus} PDB: 4ggk_A
Probab=46.72 E-value=33 Score=26.33 Aligned_cols=43 Identities=26% Similarity=0.310 Sum_probs=29.7
Q ss_pred HHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEeecc
Q psy13219 63 LEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDT 109 (193)
Q Consensus 63 ~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD~ 109 (193)
++.|..+ ....++++|...|+++...|++.| +-|++.=+|+ |.
T Consensus 52 l~~I~~A--~~sI~i~~y~~~~~~i~~aL~~aa-~rGV~Vrii~-D~ 94 (196)
T 4ggj_A 52 LRALLAA--RSSLELCLFAFSSPQLGRAVQLLH-QRGVRVRVIT-DC 94 (196)
T ss_dssp HHHHHTC--SSEEEEEESCBCCHHHHHHHHHHH-HTTCEEEEEE-SS
T ss_pred HHHHHHh--heEEEEEEEEeCCHHHHHHHHHHH-HcCCcEEEEE-ec
Confidence 3444443 235789999999999887776554 5699876664 64
No 96
>2pju_A Propionate catabolism operon regulatory protein; structural genomics, PRPR, transcriptional regulation, PSI- 2, protein structure initiative; 2.10A {Escherichia coli} SCOP: c.92.3.1
Probab=46.67 E-value=27 Score=27.92 Aligned_cols=80 Identities=15% Similarity=0.140 Sum_probs=49.2
Q ss_pred ceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCc-cccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHH
Q psy13219 17 TRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMS-TTSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRA 95 (193)
Q Consensus 17 ~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~s-s~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RA 95 (193)
..++.|+.-=++... |-=.++.+|-...+-.-+++..+ ...++.+.+..+-. ++.|...+.+..++.++++
T Consensus 79 ~~~~iPVV~I~vs~~-----Dil~aL~~a~~~~~kIavVg~~~~~~~~~~i~~ll~~~---i~~~~~~~~ee~~~~i~~l 150 (225)
T 2pju_A 79 SRLSVPVILIKPSGY-----DVLQFLAKAGKLTSSIGVVTYQETIPALVAFQKTFNLR---LDQRSYITEEDARGQINEL 150 (225)
T ss_dssp TTCSSCEEEECCCHH-----HHHHHHHHTTCTTSCEEEEEESSCCHHHHHHHHHHTCC---EEEEEESSHHHHHHHHHHH
T ss_pred hhCCCCEEEecCCHH-----HHHHHHHHHHhhCCcEEEEeCchhhhHHHHHHHHhCCc---eEEEEeCCHHHHHHHHHHH
Confidence 445667665443322 22245555544434333343322 33456666554422 6778999999999999999
Q ss_pred HHcCCcEEE
Q psy13219 96 ERSGYSAIV 104 (193)
Q Consensus 96 e~AG~~Alv 104 (193)
++.||+++|
T Consensus 151 ~~~G~~vVV 159 (225)
T 2pju_A 151 KANGTEAVV 159 (225)
T ss_dssp HHTTCCEEE
T ss_pred HHCCCCEEE
Confidence 999999976
No 97
>2oog_A Glycerophosphoryl diester phosphodiesterase; phosphatase, ST genomics, protein structure initiative, PSI; 2.20A {Staphylococcus aureus subsp} PDB: 2p76_A
Probab=46.61 E-value=22 Score=28.89 Aligned_cols=72 Identities=15% Similarity=0.120 Sum_probs=45.9
Q ss_pred HHHHHHHHHhccCc---------eeeeccCccccHHHHHhhCCCCceEEEEEeec-----------------------CH
Q psy13219 38 GEVATARAAGMMDA---------IMILSLMSTTSLEEVRAQNPSTTLWLQMYIFK-----------------------DR 85 (193)
Q Consensus 38 gE~~~araA~~~g~---------~~~lst~ss~s~eei~~~~~~~~~wfQlY~~~-----------------------dr 85 (193)
-+..+++.-.+.|. ..++||+....++.+.+..|.-+. .+|+-.. -.
T Consensus 149 ~~~~v~~~l~~~~~~~~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~-~~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~ 227 (287)
T 2oog_A 149 MEEQLLASLKKHHLLNNNKLKNGHVMIQSFSDESLKKIHRQNKHVPL-VKLVDKGELQQFNDQRLKEIRSYAIGLGPDYT 227 (287)
T ss_dssp HHHHHHHHHHHTTCSSHHHHHTTSEEEEESCHHHHHHHHHHCTTSCE-EEEECTTTGGGCCHHHHHHHHTTCSEEEEBGG
T ss_pred HHHHHHHHHHHcCCcccccCCCCCEEEEeCCHHHHHHHHHhCCCCcE-EEEecCCcccccCHHHHHHHhhhheEEcccHh
Confidence 34566666666654 467899988889988877664332 2333211 11
Q ss_pred HHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 86 ALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
..+.+++++++++|.+..+.|||.+
T Consensus 228 ~~~~~~v~~~~~~G~~v~~wTvn~~ 252 (287)
T 2oog_A 228 DLTEQNTHHLKDLGFIVHPYTVNEK 252 (287)
T ss_dssp GCCHHHHHHHHHTTCEECCBCCCSH
T ss_pred hcCHHHHHHHHHCCCeEEEEeCCCH
Confidence 2235677888888888888887753
No 98
>3flu_A DHDPS, dihydrodipicolinate synthase; TIM barrel, beta-alpha-barrel, amino-acid biosynthesis, diaminopimelate biosynthesis; 2.00A {Neisseria meningitidis serogroup B} SCOP: c.1.10.0
Probab=46.49 E-value=1.1e+02 Score=25.13 Aligned_cols=85 Identities=13% Similarity=0.010 Sum_probs=51.1
Q ss_pred ceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHH-------HhhC-CCCceEEEEEeecCHHHH
Q psy13219 22 PVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEV-------RAQN-PSTTLWLQMYIFKDRALS 88 (193)
Q Consensus 22 P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei-------~~~~-~~~~~wfQlY~~~dr~~~ 88 (193)
|.++.|+--.+-++.++=..+++-.-+.|+- ++.+|.+ +.|.||- .+.. +..+.+.++- ..+-+.+
T Consensus 13 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 91 (297)
T 3flu_A 13 VALITPMNQDGSIHYEQLRDLIDWHIENGTDGIVAVGTTGESATLSVEEHTAVIEAVVKHVAKRVPVIAGTG-ANNTVEA 91 (297)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHTTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred EeeeccCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCcccCCHHHHHHHHHHHHHHhCCCCcEEEeCC-CcCHHHH
Confidence 5556676444444555555666666667764 3445443 3444433 2222 3334455442 3466778
Q ss_pred HHHHHHHHHcCCcEEEEee
Q psy13219 89 LQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 89 ~~ll~RAe~AG~~AlvvTV 107 (193)
.++.++|+++|+.++++..
T Consensus 92 i~la~~a~~~Gadavlv~~ 110 (297)
T 3flu_A 92 IALSQAAEKAGADYTLSVV 110 (297)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEECC
Confidence 8999999999999999874
No 99
>1m65_A Hypothetical protein YCDX; structural genomics, beta-alpha-barrel, metallo-enzyme, STRU function project, S2F, unknown function; 1.57A {Escherichia coli} SCOP: c.6.3.1 PDB: 1m68_A 1pb0_A
Probab=46.47 E-value=13 Score=28.98 Aligned_cols=23 Identities=17% Similarity=0.221 Sum_probs=19.3
Q ss_pred HHHHHHHHHHcCCcEEEEeeccC
Q psy13219 88 SLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
.++++++|++.|+++|++|==.+
T Consensus 20 ~~e~v~~A~~~Gl~~iaiTDH~~ 42 (245)
T 1m65_A 20 LSDYIAQAKQKGIKLFAITDHGP 42 (245)
T ss_dssp HHHHHHHHHHHTCCEEEEEEECT
T ss_pred HHHHHHHHHHCCCCEEEECCCCC
Confidence 45899999999999999985433
No 100
>3l5l_A Xenobiotic reductase A; TIM barrel, oxidoreductase; HET: BU3 FMN; 1.03A {Pseudomonas putida} SCOP: c.1.4.0 PDB: 3l5m_A* 3n19_B* 3n16_A* 3l68_A* 3l67_A* 3l65_A* 3l66_A* 3n14_A* 2h8z_A* 2h90_A* 2h8x_A*
Probab=46.39 E-value=1.3e+02 Score=25.45 Aligned_cols=43 Identities=16% Similarity=0.302 Sum_probs=27.6
Q ss_pred HHHhhCC-CCceEEEEEee-------cCHHHHHHHHHHHHHcCCcEEEEee
Q psy13219 65 EVRAQNP-STTLWLQMYIF-------KDRALSLQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 65 ei~~~~~-~~~~wfQlY~~-------~dr~~~~~ll~RAe~AG~~AlvvTV 107 (193)
.|.++.+ +-+..+=|-.. .+.+...+++++.+++|+..|-|+.
T Consensus 217 aVr~avg~d~pV~vRis~~~~~~~G~~~~~~~~~la~~L~~~Gvd~i~vs~ 267 (363)
T 3l5l_A 217 AVREVWPENLPLTARFGVLEYDGRDEQTLEESIELARRFKAGGLDLLSVSV 267 (363)
T ss_dssp HHHTTSCTTSCEEEEEEEECSSSCHHHHHHHHHHHHHHHHHTTCCEEEEEE
T ss_pred HHHHHcCCCceEEEEecchhcCCCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 4444444 33456655442 2345667889999999999877765
No 101
>2yxo_A Histidinol phosphatase; metal-dependent, hydrolase; 1.60A {Thermus thermophilus} PDB: 2yz5_A 2z4g_A
Probab=45.72 E-value=15 Score=28.99 Aligned_cols=24 Identities=17% Similarity=0.299 Sum_probs=19.5
Q ss_pred HHHHHHHHHHcCCcEEEEeeccCC
Q psy13219 88 SLQMVQRAERSGYSAIVITMDTAV 111 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvTVD~pv 111 (193)
.++++++|++.|+++|++|==.+.
T Consensus 18 ~ee~v~~A~~~Gl~~iaiTDH~~~ 41 (267)
T 2yxo_A 18 PEAYLEEARAKGLKGVVFTDHSPM 41 (267)
T ss_dssp HHHHHHHHHHTTCSEEEEEEECCC
T ss_pred HHHHHHHHHHcCCCEEEEcCCCCC
Confidence 358999999999999999854443
No 102
>4gel_A Mitochondrial cardiolipin hydrolase; piRNA, phospholipase D, nuclease; 1.76A {Drosophila melanogaster} PDB: 4gem_A 4gen_A
Probab=45.29 E-value=31 Score=26.50 Aligned_cols=36 Identities=19% Similarity=0.276 Sum_probs=27.5
Q ss_pred CceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 73 TTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 73 ~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
....+++|...|+++...|++.| +-|++.=+|+ |..
T Consensus 72 ~sI~i~~Y~~~~~~I~~aL~~Aa-~RGV~VRii~-D~~ 107 (220)
T 4gel_A 72 YSIDLAIYTFTSLFLADSIKRAL-QRGVIIRIIS-DGE 107 (220)
T ss_dssp SEEEEECSCBCCHHHHHHHHHHH-HHTCEEEEEC-CTT
T ss_pred hEEEEEEEEeCCHHHHHHHHHHH-HcCCeEEEEE-ech
Confidence 35688999999999888777655 4599877774 654
No 103
>2vd3_A ATP phosphoribosyltransferase; metal-binding, glycosyltransferase, HISG, histidine, magnesi transferase; HET: HIS; 2.45A {Methanobacterium thermoautotrophicum}
Probab=45.10 E-value=43 Score=27.97 Aligned_cols=62 Identities=15% Similarity=0.224 Sum_probs=48.9
Q ss_pred HHhccCceeeeccCccccHHHHHhhCCC-----------CceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 45 AAGMMDAIMILSLMSTTSLEEVRAQNPS-----------TTLWLQMYIFKDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 45 aA~~~g~~~~lst~ss~s~eei~~~~~~-----------~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
+-.+.+-.|+.=+.....+|++.+..|+ ...|+.+...-++....+++.+-+++|+++|+++
T Consensus 210 v~~A~~~~~~~~n~p~~~l~~v~~~lPg~~~PTV~~l~~~~~w~aV~~vv~~~~~~~~~~~Lk~~GA~~Ilv~ 282 (289)
T 2vd3_A 210 VIDAEGKRLVMLNIDRKNLDRVRALMPGMTGPTVSEVLSDNGVVAVHAVVDEKEVFNLINRLKAVGARDILVV 282 (289)
T ss_dssp HHHTTTEEEEEEEEEGGGHHHHHHHCCCSSSCEEEECCSSSCEEEEEEEEETTTHHHHHHHHHTTTCEEEEEE
T ss_pred HHHhccEEEEEEeCCHHHHHHHHHhcccCCCCceecccCCCCEEEEEEEEcHHHHHHHHHHHHHcCCCeEEEe
Confidence 3445566677666778889999877531 2359888888899999999999999999999886
No 104
>1qo2_A Molecule: N-((5-phosphoribosyl)-formimino)-5-aminoimidazol- 4-carboxamid ribonucleotid...; isomerase, histidine biosynthesis; 1.85A {Thermotoga maritima} SCOP: c.1.2.1 PDB: 2cff_A 2w79_A
Probab=44.66 E-value=40 Score=26.35 Aligned_cols=22 Identities=9% Similarity=0.326 Sum_probs=18.5
Q ss_pred CCCHHHHHHHHhcCCCCEEEec
Q psy13219 170 SVDWDDVRSLVQATKLPIVCKG 191 (193)
Q Consensus 170 ~~tW~di~wlr~~~~lPivlKG 191 (193)
..+|+-++++++..+.|++.=|
T Consensus 174 g~~~~~i~~l~~~~~iPvia~G 195 (241)
T 1qo2_A 174 EHDFSLTKKIAIEAEVKVLAAG 195 (241)
T ss_dssp CCCHHHHHHHHHHHTCEEEEES
T ss_pred cCCHHHHHHHHHhcCCcEEEEC
Confidence 3589999999999999998754
No 105
>2w6r_A Imidazole glycerol phosphate synthase subunit HISF; lyase, fusion protein, cobalamin, precorrin, novel fold, VIT; 2.10A {Thermotoga maritima}
Probab=44.61 E-value=57 Score=25.71 Aligned_cols=19 Identities=26% Similarity=0.352 Sum_probs=16.0
Q ss_pred HHHHHHHHHHcCCcEEEEe
Q psy13219 88 SLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvT 106 (193)
..+++++++++|+++|.++
T Consensus 32 ~~~~a~~~~~~Ga~~i~v~ 50 (266)
T 2w6r_A 32 LRDWVVEVEKRGAGEILLT 50 (266)
T ss_dssp HHHHHHHHHHHTCSEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEE
Confidence 4578888899999999984
No 106
>3na8_A Putative dihydrodipicolinate synthetase; lyase; HET: MSE; 1.85A {Pseudomonas aeruginosa}
Probab=44.24 E-value=1.1e+02 Score=25.41 Aligned_cols=86 Identities=14% Similarity=-0.079 Sum_probs=52.7
Q ss_pred CceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHH-------Hhh-CCCCceEEEEEeecCHHH
Q psy13219 21 CPVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEV-------RAQ-NPSTTLWLQMYIFKDRAL 87 (193)
Q Consensus 21 ~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei-------~~~-~~~~~~wfQlY~~~dr~~ 87 (193)
.|.++.|+--.+-++.++=..+++-..+.|+- ++.+|.+ +.|.||- .+. .+..+...++- ..+-+.
T Consensus 29 ~~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~Gi~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~~t~~ 107 (315)
T 3na8_A 29 IGYTITPFAADGGLDLPALGRSIERLIDGGVHAIAPLGSTGEGAYLSDPEWDEVVDFTLKTVAHRVPTIVSVS-DLTTAK 107 (315)
T ss_dssp EEECCCCBCTTSSBCHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHH
T ss_pred EEEeeCcCCCCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CCCHHH
Confidence 45666776544444555556777776677764 3444443 3444433 222 23344555543 345677
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q psy13219 88 SLQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvTV 107 (193)
+.++.+.|+++|+.++++..
T Consensus 108 ai~la~~A~~~Gadavlv~~ 127 (315)
T 3na8_A 108 TVRRAQFAESLGAEAVMVLP 127 (315)
T ss_dssp HHHHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 88999999999999999864
No 107
>2h9a_B CO dehydrogenase/acetyl-COA synthase, iron- sulfur protein; heterodimer, beta-alpha-barrels, oxidoreductase; HET: B12; 1.90A {Carboxydothermus hydrogenoformans} PDB: 2ycl_B*
Probab=44.18 E-value=26 Score=29.56 Aligned_cols=76 Identities=13% Similarity=0.034 Sum_probs=43.0
Q ss_pred CchHHHHHHHHHhccCce---eeeccCccccHHHHHhhCC--CCceEEEEEeecCHHHHHHHHHHHHHcCC--cEEEEee
Q psy13219 35 HADGEVATARAAGMMDAI---MILSLMSTTSLEEVRAQNP--STTLWLQMYIFKDRALSLQMVQRAERSGY--SAIVITM 107 (193)
Q Consensus 35 ~~~gE~~~araA~~~g~~---~~lst~ss~s~eei~~~~~--~~~~wfQlY~~~dr~~~~~ll~RAe~AG~--~AlvvTV 107 (193)
+|+-+..++++|.++|.- ++-|-.+. ..+++.+... +.+ .. +--++|-+..++++++|+++|+ +-|++.-
T Consensus 132 ~~~~~~~V~eaal~aga~~k~iINdvs~~-~~~~~~~~aa~~g~~-vv-~m~~~dv~~l~~~~~~a~~~Gi~~e~IilDP 208 (310)
T 2h9a_B 132 VEEKDAEIFPVIGEALSGRNCLLSSATKD-NYKPIVATCMVHGHS-VV-ASAPLDINLSKQLNIMIMEMNLAPNRIIMDP 208 (310)
T ss_dssp CHHHHHHHHHHHHHHTTTSCCEEEEECTT-THHHHHHHHHHHTCE-EE-EECSSCHHHHHHHHHHHHTTTCCGGGEEEEC
T ss_pred CCCCCHHHHHHHHHhCCCCCCEEEECCCC-ccHHHHHHHHHhCCC-EE-EEChhHHHHHHHHHHHHHHCCCChhhEEEeC
Confidence 566777777777777653 44333222 3555543311 111 11 1113377888899999999998 5677764
Q ss_pred ccCCCC
Q psy13219 108 DTAVLG 113 (193)
Q Consensus 108 D~pv~G 113 (193)
=.-.+|
T Consensus 209 g~g~~g 214 (310)
T 2h9a_B 209 LIGALG 214 (310)
T ss_dssp CCCCTT
T ss_pred CCcccc
Confidence 433334
No 108
>2vc6_A MOSA, dihydrodipicolinate synthase; DHDPS, TIM barrel, schiff base, lyase; HET: MCL; 1.95A {Sinorhizobium meliloti}
Probab=44.09 E-value=1e+02 Score=25.09 Aligned_cols=84 Identities=11% Similarity=-0.001 Sum_probs=50.7
Q ss_pred ceeecchhccccCCchHHHHHHHHHhccCceee--eccCc---cccHHHH-------HhhC-CCCceEEEEEeecCHHHH
Q psy13219 22 PVGIAPSAMQKLAHADGEVATARAAGMMDAIMI--LSLMS---TTSLEEV-------RAQN-PSTTLWLQMYIFKDRALS 88 (193)
Q Consensus 22 P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~--lst~s---s~s~eei-------~~~~-~~~~~wfQlY~~~dr~~~ 88 (193)
|.++.|+ -.+-++.++=..+++-.-+.|+--+ .+|.+ +.|.||- .+.. +..+...++- ..+-+.+
T Consensus 7 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 84 (292)
T 2vc6_A 7 TALVTPF-ADDRIDEVALHDLVEWQIEEGSFGLVPCGTTGESPTLSKSEHEQVVEITIKTANGRVPVIAGAG-SNSTAEA 84 (292)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEETTSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHH
T ss_pred EeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccChhhCCHHHHHHHHHHHHHHhCCCCcEEEecC-CccHHHH
Confidence 5556777 4454566665667776666676443 34432 4444433 2222 2344555553 2345667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q psy13219 89 LQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 89 ~~ll~RAe~AG~~AlvvTV 107 (193)
.++.+.|+++|+.++++..
T Consensus 85 i~la~~A~~~Gadavlv~~ 103 (292)
T 2vc6_A 85 IAFVRHAQNAGADGVLIVS 103 (292)
T ss_dssp HHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHcCCCEEEEcC
Confidence 8899999999999998875
No 109
>1vd6_A Glycerophosphoryl diester phosphodiesterase; glycerophosphod phosphodiesterase, HB8; 1.30A {Thermus thermophilus} SCOP: c.1.18.3 PDB: 1v8e_A
Probab=44.09 E-value=31 Score=26.93 Aligned_cols=69 Identities=13% Similarity=0.079 Sum_probs=44.4
Q ss_pred HHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEEE----------------eecCHHHHHHHHHHHHHcCCcEE
Q psy13219 40 VATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMY----------------IFKDRALSLQMVQRAERSGYSAI 103 (193)
Q Consensus 40 ~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY----------------~~~dr~~~~~ll~RAe~AG~~Al 103 (193)
..+++.-.+ .-..++||++...++.+.+..|.-+..+ ++ -+.-...+.+++++++++|.+..
T Consensus 113 ~~v~~~l~~-~~~v~i~Sf~~~~l~~~~~~~p~~~~~~-l~~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~~~~~G~~v~ 190 (224)
T 1vd6_A 113 RRLAALLRG-REGVWVSSFDPLALLALRKAAPGLPLGF-LMAEDHSALLPCLGVEAVHPHHALVTEEAVAGWRKRGLFVV 190 (224)
T ss_dssp HHHHHHTTT-CSSEEEEESCHHHHHHHHHHCTTSCEEE-EESSCCGGGGGGSCCSEEEEBGGGCCHHHHHHHHHTTCEEE
T ss_pred HHHHHHHhc-CCcEEEEeCCHHHHHHHHHHCCCCCEEE-EeccccHHHHHHcCCcEEecCcccCCHHHHHHHHHCCCEEE
Confidence 345555444 4456788888888888877655432211 11 11122345789999999999999
Q ss_pred EEeeccC
Q psy13219 104 VITMDTA 110 (193)
Q Consensus 104 vvTVD~p 110 (193)
+.|||.+
T Consensus 191 ~wtvn~~ 197 (224)
T 1vd6_A 191 AWTVNEE 197 (224)
T ss_dssp EECCCCH
T ss_pred EEeCCCH
Confidence 9999864
No 110
>1vs1_A 3-deoxy-7-phosphoheptulonate synthase; (beta/alpha)8 barrel, transferase; HET: PEP; 2.30A {Aeropyrum pernix}
Probab=43.86 E-value=43 Score=27.63 Aligned_cols=46 Identities=20% Similarity=0.199 Sum_probs=34.4
Q ss_pred hccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEE
Q psy13219 29 AMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQM 79 (193)
Q Consensus 29 g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQl 79 (193)
+++++ ..+|=..+.+.|.+.|++++.+-+...+++.+++.. -|+|+
T Consensus 82 ~f~g~-g~~gl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~v----d~~kI 127 (276)
T 1vs1_A 82 SFQGL-GLEGLKLLRRAGDEAGLPVVTEVLDPRHVETVSRYA----DMLQI 127 (276)
T ss_dssp SCCCC-THHHHHHHHHHHHHHTCCEEEECCCGGGHHHHHHHC----SEEEE
T ss_pred hhcCC-CHHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHHhC----CeEEE
Confidence 34444 245667888999999999999999989988887652 36666
No 111
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=43.81 E-value=60 Score=28.65 Aligned_cols=41 Identities=10% Similarity=-0.045 Sum_probs=27.4
Q ss_pred CceEEEEEeecC-HHHHHHHHHHHHHc--CCcEEEEeeccCCCC
Q psy13219 73 TTLWLQMYIFKD-RALSLQMVQRAERS--GYSAIVITMDTAVLG 113 (193)
Q Consensus 73 ~~~wfQlY~~~d-r~~~~~ll~RAe~A--G~~AlvvTVD~pv~G 113 (193)
.+...|+...+| .+..+++++-|+++ ++.+|.|.+=+|...
T Consensus 180 ~~vgvni~~~~~~~~~~~dy~~~a~~l~~~aD~ieiNiscPnt~ 223 (443)
T 1tv5_A 180 HIVGVSIGKNKDTVNIVDDLKYCINKIGRYADYIAINVSSPNTP 223 (443)
T ss_dssp CEEEEEECCCTTCSCHHHHHHHHHHHHGGGCSEEEEECCCTTST
T ss_pred ceEEEEecCcccchHHHHHHHHHHHHHhcCCCEEEEeccCCCCc
Confidence 466778876653 12345555555544 599999999998753
No 112
>3qja_A IGPS, indole-3-glycerol phosphate synthase; structural genomics, T structural genomics consortium, TBSGC, lyase; 1.29A {Mycobacterium tuberculosis} PDB: 3t40_A* 3t44_A* 3t55_A* 3t78_A* 4fb7_A*
Probab=43.36 E-value=44 Score=27.35 Aligned_cols=76 Identities=18% Similarity=0.227 Sum_probs=48.9
Q ss_pred eCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhhCC--CCceEEEEEeecCHHHHHHHHHHHH
Q psy13219 19 YRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQNP--STTLWLQMYIFKDRALSLQMVQRAE 96 (193)
Q Consensus 19 ~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~~--~~~~wfQlY~~~dr~~~~~ll~RAe 96 (193)
++.|++.- .++--+-.+..|+++++-++..+.+......++++.+... +-..|.-+ .+. +-+++|.
T Consensus 112 v~lPvl~k-----dfiid~~qv~~A~~~GAD~VlLi~a~l~~~~l~~l~~~a~~lGl~~lvev---~t~----ee~~~A~ 179 (272)
T 3qja_A 112 VSIPVLRK-----DFVVQPYQIHEARAHGADMLLLIVAALEQSVLVSMLDRTESLGMTALVEV---HTE----QEADRAL 179 (272)
T ss_dssp CSSCEEEE-----SCCCSHHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHHTTCEEEEEE---SSH----HHHHHHH
T ss_pred CCCCEEEC-----ccccCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHCCCcEEEEc---CCH----HHHHHHH
Confidence 56788742 2322233578888999999988888777666666544321 22344433 333 3467788
Q ss_pred HcCCcEEEEe
Q psy13219 97 RSGYSAIVIT 106 (193)
Q Consensus 97 ~AG~~AlvvT 106 (193)
++|++-|.+|
T Consensus 180 ~~Gad~IGv~ 189 (272)
T 3qja_A 180 KAGAKVIGVN 189 (272)
T ss_dssp HHTCSEEEEE
T ss_pred HCCCCEEEEC
Confidence 8999999998
No 113
>3si9_A DHDPS, dihydrodipicolinate synthase; structural genomics, seattle structural genomics center for infectious disease, ssgcid, TIM barrel; 2.10A {Bartonella henselae}
Probab=43.22 E-value=1.3e+02 Score=24.97 Aligned_cols=86 Identities=12% Similarity=0.030 Sum_probs=51.7
Q ss_pred CceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHH-------Hhh-CCCCceEEEEEeecCHHH
Q psy13219 21 CPVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEV-------RAQ-NPSTTLWLQMYIFKDRAL 87 (193)
Q Consensus 21 ~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei-------~~~-~~~~~~wfQlY~~~dr~~ 87 (193)
.|.++.|+--.+-++.++=..+++-..+.|+- ++++|.+ +.|.||- .+. .+..+...++- ..+-+.
T Consensus 27 ~~alvTPf~~dg~iD~~~l~~li~~li~~Gv~Gl~v~GtTGE~~~Ls~~Er~~v~~~~v~~~~grvpViaGvg-~~st~~ 105 (315)
T 3si9_A 27 VTALITPFDDNGAIDEKAFCNFVEWQITQGINGVSPVGTTGESPTLTHEEHKRIIELCVEQVAKRVPVVAGAG-SNSTSE 105 (315)
T ss_dssp EEECCCCBCTTSCBCHHHHHHHHHHHHHTTCSEEECSSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHH
T ss_pred eEeeECCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccccCccccCHHHHHHHHHHHHHHhCCCCcEEEeCC-CCCHHH
Confidence 35566776444444555556666666667764 3444443 3444433 222 23345555543 345677
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q psy13219 88 SLQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvTV 107 (193)
+.++.++|+++|+.++++..
T Consensus 106 ai~la~~A~~~Gadavlv~~ 125 (315)
T 3si9_A 106 AVELAKHAEKAGADAVLVVT 125 (315)
T ss_dssp HHHHHHHHHHTTCSEEEEEC
T ss_pred HHHHHHHHHhcCCCEEEECC
Confidence 88899999999999999873
No 114
>3h4q_A Putative acetyltransferase; NP_371943.1, structural genomics center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE P33; 2.50A {Staphylococcus aureus subsp}
Probab=43.00 E-value=32 Score=24.64 Aligned_cols=47 Identities=13% Similarity=-0.036 Sum_probs=32.5
Q ss_pred EEEEeecC-----HHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCC
Q psy13219 77 LQMYIFKD-----RALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKF 123 (193)
Q Consensus 77 fQlY~~~d-----r~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~ 123 (193)
..+|+..+ +.++..+++.|++.|++.|.++|+..-...+.-=.|.||
T Consensus 109 ~~l~V~p~~~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF 160 (188)
T 3h4q_A 109 HRLTGSKEYKGAATELFNYVIDVVKARGAEVILTDTFALNKPAQGLFAKFGF 160 (188)
T ss_dssp EEEECCSSCTTHHHHHHHHHHHHHHHTTCCEEEEEGGGSCGGGTHHHHHTTC
T ss_pred EEEEECCccCcHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHCCC
Confidence 34566555 466777788888899999999998764444444445666
No 115
>2pz0_A Glycerophosphoryl diester phosphodiesterase; glycerophosphodiester phosphodiesterase, T. tengcongensis; 1.91A {Thermoanaerobacter tengcongensis}
Probab=42.92 E-value=20 Score=28.59 Aligned_cols=71 Identities=18% Similarity=0.211 Sum_probs=41.7
Q ss_pred HHHHHHHHhccCc--eeeeccCccccHHHHHhhCCCCceEEEEEee-------------------cCHHHHHHHHHHHHH
Q psy13219 39 EVATARAAGMMDA--IMILSLMSTTSLEEVRAQNPSTTLWLQMYIF-------------------KDRALSLQMVQRAER 97 (193)
Q Consensus 39 E~~~araA~~~g~--~~~lst~ss~s~eei~~~~~~~~~wfQlY~~-------------------~dr~~~~~ll~RAe~ 97 (193)
+..+++.-.+.|. ..++||+....++.+.+..|+-+.. +++.. .-...+.++++++++
T Consensus 131 ~~~v~~~l~~~~~~~~vii~SF~~~~l~~~~~~~p~~~~~-~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~~~~ 209 (252)
T 2pz0_A 131 EEKLIKAIKEYNFEERVIISSFNHYSLRDVKKMAPHLKIG-LLYQCGLVEPWHMALRMEAYSLHPFYFNIIPELVEGCKK 209 (252)
T ss_dssp HHHHHHHHHHTTCTTTEEEEESBHHHHHHHHHHCTTSEEE-EEECSBCSSTHHHHHHTTCSEEEEBGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHhcCCCCCEEEEeCCHHHHHHHHHHCCCCCEE-EEecCccccHHHHHHHcCCeEEecchhcCCHHHHHHHHH
Confidence 3455555555543 3678888888888888776643322 22211 111223567777777
Q ss_pred cCCcEEEEeeccC
Q psy13219 98 SGYSAIVITMDTA 110 (193)
Q Consensus 98 AG~~AlvvTVD~p 110 (193)
+|.+..+.|||.+
T Consensus 210 ~G~~v~~wTvn~~ 222 (252)
T 2pz0_A 210 NGVKLFPWTVDRK 222 (252)
T ss_dssp TTCEECCBCCCSH
T ss_pred CCCEEEEECCCCH
Confidence 7777777777643
No 116
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=42.54 E-value=12 Score=32.26 Aligned_cols=23 Identities=39% Similarity=0.579 Sum_probs=20.0
Q ss_pred CCCCCCcceECCceeCCceeecc
Q psy13219 5 VCDRDSGLTVLGTRYRCPVGIAP 27 (193)
Q Consensus 5 v~~~d~~t~~lG~~~~~P~~iaP 27 (193)
..+++++++++|.++.-||++|.
T Consensus 45 ~~~~~L~~~~~Gl~~~NPvglAa 67 (367)
T 3zwt_A 45 QDSDMLEVRVLGHKFRNPVGIAA 67 (367)
T ss_dssp CCCGGGCEEETTEEESSSEEECT
T ss_pred CCCCCCcEEECCEEcCCCCEeCC
Confidence 35677899999999999999984
No 117
>1ur4_A Galactanase; hydrolase, beta-1, glycoside hydrolase, substrate specificity, pectin, GH-A, family 53, plant cell WALL degradation; HET: B2G PGE; 2.2A {Bacillus licheniformis} SCOP: c.1.8.3 PDB: 1r8l_A* 1ur0_A* 2ccr_A* 2j74_A* 2gft_A*
Probab=41.49 E-value=38 Score=29.48 Aligned_cols=82 Identities=11% Similarity=0.091 Sum_probs=45.3
Q ss_pred Cceeecch-hccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEEEee---------------cC
Q psy13219 21 CPVGIAPS-AMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMYIF---------------KD 84 (193)
Q Consensus 21 ~P~~iaP~-g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY~~---------------~d 84 (193)
.++.+.|+ ++...+--..++.....-.+.|..|--.+.......++.+..+ ..|.-|.++ .|
T Consensus 10 ~~~~~~~~~~~~~~f~~G~Dis~~~~~e~~G~~y~~~~G~~~d~~~ilk~~G--~N~VRlrvwv~p~~~~g~~y~~g~~d 87 (399)
T 1ur4_A 10 SGLYVEKVSGLRKDFIKGVDVSSIIALEESGVAFYNESGKKQDIFKTLKEAG--VNYVRVRIWNDPYDANGNGYGGGNND 87 (399)
T ss_dssp -CCCCCCCTTCCTTCEEEEECTTHHHHHHTTCCCBCTTSCBCCHHHHHHHTT--CCEEEEEECSCCBCTTCCBCSTTCCC
T ss_pred CceEeecCCCCccceEEEEehhhhHHHHHcCCeeeCCCCccchHHHHHHHCC--CCEEEEeeecCCcccccCccCCCCCC
Confidence 34555554 2222222344544444555677666443344455555544432 344444322 35
Q ss_pred HHHHHHHHHHHHHcCCcEEE
Q psy13219 85 RALSLQMVQRAERSGYSAIV 104 (193)
Q Consensus 85 r~~~~~ll~RAe~AG~~Alv 104 (193)
-+.+..+++||+++|.+.++
T Consensus 88 ~~~~~~~a~~Ak~~GLkVll 107 (399)
T 1ur4_A 88 LEKAIQIGKRATANGMKLLA 107 (399)
T ss_dssp HHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHHHHHHHHHCCCEEEE
Confidence 67888999999999998665
No 118
>3tak_A DHDPS, dihydrodipicolinate synthase; TIM barrel, lysine biosynthesis, pyruvate, lyase; 1.42A {Acinetobacter baumannii} PDB: 3pud_A* 3pue_A* 3pul_A 3rk8_A 3tce_A* 3tdf_A 3u8g_A 3uqn_A 4dxv_A
Probab=41.40 E-value=1.1e+02 Score=24.84 Aligned_cols=85 Identities=9% Similarity=-0.021 Sum_probs=49.9
Q ss_pred ceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHHH-------hhC-CCCceEEEEEeecCHHHH
Q psy13219 22 PVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEVR-------AQN-PSTTLWLQMYIFKDRALS 88 (193)
Q Consensus 22 P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei~-------~~~-~~~~~wfQlY~~~dr~~~ 88 (193)
|-++.|+--.+-.+.++=..+.+-.-+.|+- ++.+|.+ +.|.||-. +.. +..+...++- ..+-+.+
T Consensus 7 ~a~vTPf~~dg~iD~~~l~~lv~~li~~Gv~gl~~~GttGE~~~Ls~~Er~~v~~~~~~~~~gr~pviaGvg-~~~t~~a 85 (291)
T 3tak_A 7 VAIVTPMLKDGGVDWKSLEKLVEWHIEQGTNSIVAVGTTGEASTLSMEEHTQVIKEIIRVANKRIPIIAGTG-ANSTREA 85 (291)
T ss_dssp EECCCCBCTTSCBCHHHHHHHHHHHHHHTCCEEEESSTTTTGGGSCHHHHHHHHHHHHHHHTTSSCEEEECC-CSSHHHH
T ss_pred eeeECCCCCCCCcCHHHHHHHHHHHHHCCCCEEEECccccccccCCHHHHHHHHHHHHHHhCCCCeEEEeCC-CCCHHHH
Confidence 4556676444444555555666655556653 4445544 34444432 222 3334455442 3356778
Q ss_pred HHHHHHHHHcCCcEEEEee
Q psy13219 89 LQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 89 ~~ll~RAe~AG~~AlvvTV 107 (193)
.++.++|+++|+.++++..
T Consensus 86 i~la~~a~~~Gadavlv~~ 104 (291)
T 3tak_A 86 IELTKAAKDLGADAALLVT 104 (291)
T ss_dssp HHHHHHHHHHTCSEEEEEC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 8899999999999999873
No 119
>3gr7_A NADPH dehydrogenase; flavin, FMN, beta-alpha-barrel, oxidoreductase, flavoprotein; HET: FMN; 2.30A {Geobacillus kaustophilus} PDB: 3gr8_A*
Probab=41.36 E-value=1.6e+02 Score=24.66 Aligned_cols=41 Identities=12% Similarity=0.163 Sum_probs=26.9
Q ss_pred HHHhhCCCCceEEEEEee------cCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 65 EVRAQNPSTTLWLQMYIF------KDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 65 ei~~~~~~~~~wfQlY~~------~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
+|.++. +-+.++=|-.. .+.+...+++++.+++|+..|-|+
T Consensus 203 avr~~v-~~pv~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs 249 (340)
T 3gr7_A 203 AVREVW-DGPLFVRISASDYHPDGLTAKDYVPYAKRMKEQGVDLVDVS 249 (340)
T ss_dssp HHHHHC-CSCEEEEEESCCCSTTSCCGGGHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHhc-CCceEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 444444 44566655542 135667789999999999877765
No 120
>2rfg_A Dihydrodipicolinate synthase; beta barrel, amino-acid biosynthesis, diaminopimelate biosyn lyase, lysine biosynthesis, schiff base; 1.50A {Hahella chejuensis}
Probab=41.24 E-value=1e+02 Score=25.30 Aligned_cols=84 Identities=13% Similarity=0.023 Sum_probs=50.7
Q ss_pred ceeecchhccccCCchHHHHHHHHHhccCcee--eeccCc---cccHHHH-------HhhC-CCCceEEEEEeecCHHHH
Q psy13219 22 PVGIAPSAMQKLAHADGEVATARAAGMMDAIM--ILSLMS---TTSLEEV-------RAQN-PSTTLWLQMYIFKDRALS 88 (193)
Q Consensus 22 P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~--~lst~s---s~s~eei-------~~~~-~~~~~wfQlY~~~dr~~~ 88 (193)
|.++.|+ -.+-++.++=..+++-.-+.|+-- +.+|.+ +.|.||- .+.. +..+...++- ..+-+.+
T Consensus 7 ~a~vTPf-~dg~iD~~~l~~lv~~li~~Gv~gi~v~GttGE~~~Ls~~Er~~v~~~~~~~~~grvpviaGvg-~~~t~~a 84 (297)
T 2rfg_A 7 IAMITPF-INGQVDEKALAGLVDWQIKHGAHGLVPVGTTGESPTLTEEEHKRVVALVAEQAQGRVPVIAGAG-SNNPVEA 84 (297)
T ss_dssp EECCCCE-ETTEECHHHHHHHHHHHHHTTCSEEECSSGGGTGGGSCHHHHHHHHHHHHHHHTTSSCBEEECC-CSSHHHH
T ss_pred EeeecCc-CCCCcCHHHHHHHHHHHHHcCCCEEEECccccchhhCCHHHHHHHHHHHHHHhCCCCeEEEccC-CCCHHHH
Confidence 5566777 445456666566666666667643 344433 4454433 2222 2344555553 2355667
Q ss_pred HHHHHHHHHcCCcEEEEee
Q psy13219 89 LQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 89 ~~ll~RAe~AG~~AlvvTV 107 (193)
.++.+.|+++|+.++++..
T Consensus 85 i~la~~A~~~Gadavlv~~ 103 (297)
T 2rfg_A 85 VRYAQHAQQAGADAVLCVA 103 (297)
T ss_dssp HHHHHHHHHHTCSEEEECC
T ss_pred HHHHHHHHhcCCCEEEEcC
Confidence 8899999999999999873
No 121
>3ch0_A Glycerophosphodiester phosphodiesterase; YP_677622.1, glycerophosphoryl diester phosphodiesterase, ST genomics; HET: MSE CIT GOL; 1.50A {Cytophaga hutchinsonii atcc 33406}
Probab=41.11 E-value=20 Score=28.78 Aligned_cols=70 Identities=17% Similarity=0.119 Sum_probs=41.4
Q ss_pred HHHHHHHhccCc--eeeeccCccccHHHHHhhCCCCceEEEEEe--------------------ecCHHHHHHHHHHHHH
Q psy13219 40 VATARAAGMMDA--IMILSLMSTTSLEEVRAQNPSTTLWLQMYI--------------------FKDRALSLQMVQRAER 97 (193)
Q Consensus 40 ~~~araA~~~g~--~~~lst~ss~s~eei~~~~~~~~~wfQlY~--------------------~~dr~~~~~ll~RAe~ 97 (193)
..+++.-.+.|. ..++||+....++.+.+..|.-+.. +++- +.-...+.++++++++
T Consensus 156 ~~v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~-~l~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~~~~ 234 (272)
T 3ch0_A 156 DLVVAEIKKAHITDRFTLQSFDVRALEYMHSQYPDIKLS-YLVETKGTLKKQLEKLSFTPAVYSPDVTLVSKKDIDAAHK 234 (272)
T ss_dssp HHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSEEE-EEECSSCCHHHHHTTSSSCCSEEEEBGGGCCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCcEEEEeCCHHHHHHHHHHCCCCcEE-EEecCCCCHHHHHHHcCCCCcEEccchhhcCHHHHHHHHH
Confidence 445555555553 3678888888888887765543222 1221 1112234567777777
Q ss_pred cCCcEEEEeeccC
Q psy13219 98 SGYSAIVITMDTA 110 (193)
Q Consensus 98 AG~~AlvvTVD~p 110 (193)
+|.+..+.|||.+
T Consensus 235 ~Gl~v~~wTvn~~ 247 (272)
T 3ch0_A 235 LGMRVIPWTVNTK 247 (272)
T ss_dssp TTCEECCBCCCSH
T ss_pred cCCEEEEeccCCH
Confidence 7777777777643
No 122
>2fli_A Ribulose-phosphate 3-epimerase; (beta/alpha)8-barrel, D- xylitol 5-phosphate, isomerase; HET: DX5; 1.80A {Streptococcus pyogenes} SCOP: c.1.2.2
Probab=40.51 E-value=63 Score=24.61 Aligned_cols=20 Identities=15% Similarity=0.320 Sum_probs=15.5
Q ss_pred HHHHHHHcCCcEEEEeeccC
Q psy13219 91 MVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 91 ll~RAe~AG~~AlvvTVD~p 110 (193)
.++.+.++|+..+.+.....
T Consensus 76 ~i~~~~~~gad~v~vh~~~~ 95 (220)
T 2fli_A 76 YVEAFAQAGADIMTIHTEST 95 (220)
T ss_dssp GHHHHHHHTCSEEEEEGGGC
T ss_pred HHHHHHHcCCCEEEEccCcc
Confidence 45777889999988877654
No 123
>3viv_A 441AA long hypothetical NFED protein; protein-peptide complex, alpha / beta motif, protease, membr protein stomatin, hydrolase-protein binding complex; 2.25A {Pyrococcus horikoshii} PDB: 3bpp_A 2deo_A
Probab=40.45 E-value=27 Score=28.06 Aligned_cols=26 Identities=27% Similarity=0.259 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHcCCcEEEEeeccCC
Q psy13219 86 ALSLQMVQRAERSGYSAIVITMDTAV 111 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~AlvvTVD~pv 111 (193)
+...+.+++|++.+.++|+|++|+|-
T Consensus 25 ~~l~~~l~~a~~~~~~~Ivl~inspG 50 (230)
T 3viv_A 25 DQFDRYITIAEQDNAEAIIIELDTPG 50 (230)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEEBSC
T ss_pred HHHHHHHHHHhcCCCCEEEEEEeCCC
Confidence 34456678888889999999999983
No 124
>3rjz_A N-type ATP pyrophosphatase superfamily; structural genomics, PSI-biology, northeast structural genom consortium, NESG, alpha-beta protein; 2.30A {Pyrococcus furiosus} SCOP: c.26.2.1 PDB: 3h7e_A 3rk0_A* 3rk1_A* 1ru8_A 2d13_A
Probab=40.08 E-value=27 Score=28.29 Aligned_cols=25 Identities=12% Similarity=0.232 Sum_probs=20.7
Q ss_pred HHHHHHHHHcCCcEEEEeeccCCCC
Q psy13219 89 LQMVQRAERSGYSAIVITMDTAVLG 113 (193)
Q Consensus 89 ~~ll~RAe~AG~~AlvvTVD~pv~G 113 (193)
++|+++.-++||+|++++||+..++
T Consensus 129 ~~Ll~e~i~~G~~aiiv~v~~~gL~ 153 (237)
T 3rjz_A 129 KEYMRELLNLGFKIMVVGVSAYGLD 153 (237)
T ss_dssp HHHHHHHHHTTCEEEEEEEESTTCC
T ss_pred HHHHHHHHHCCCEEEEEEEecCCCC
Confidence 3677777899999999999987654
No 125
>1fob_A Beta-1,4-galactanase; B/A barrel, glycosyl hydrolase, family 53, CLAN GH-A; 1.80A {Aspergillus aculeatus} SCOP: c.1.8.3 PDB: 1fhl_A
Probab=39.89 E-value=60 Score=27.07 Aligned_cols=60 Identities=15% Similarity=0.107 Sum_probs=40.4
Q ss_pred HHhccCceeeeccCccccHHHHHhhCCCCceEEEEEee-------cCHHHHHHHHHHHHHcCCcEEEEee
Q psy13219 45 AAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMYIF-------KDRALSLQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 45 aA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY~~-------~dr~~~~~ll~RAe~AG~~AlvvTV 107 (193)
.-.++|.-|--.+.......+|.+.. +..++-+++. .|-+...++++||+++|.+- +|++
T Consensus 14 ~~e~~g~~~~~~~G~~~~~~~ilk~~--G~n~vRlri~v~P~~g~~d~~~~~~~~~~ak~~Gl~v-~ld~ 80 (334)
T 1fob_A 14 LLEDEGYSYKNLNGQTQALETILADA--GINSIRQRVWVNPSDGSYDLDYNLELAKRVKAAGMSL-YLDL 80 (334)
T ss_dssp HHHHTTCCCBCTTSCBCCHHHHHHHH--TCCEEEEEECSCCTTCTTCHHHHHHHHHHHHHTTCEE-EEEE
T ss_pred HHHHcCCEEECCCCCCchHHHHHHHc--CCCEEEEEEEECCCCCccCHHHHHHHHHHHHHCCCEE-EEEe
Confidence 34556777755445556666666553 3556777755 46688889999999999974 4554
No 126
>3nk6_A 23S rRNA methyltransferase; nosiheptide, nosiheptide-resistance methyltransferase, 23S R methyltransferase; 2.00A {Streptomyces actuosus} PDB: 3nk7_A* 3gyq_A*
Probab=39.70 E-value=91 Score=25.47 Aligned_cols=56 Identities=13% Similarity=0.047 Sum_probs=40.9
Q ss_pred cCceeeeccCccccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEee
Q psy13219 49 MDAIMILSLMSTTSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 49 ~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTV 107 (193)
.|+...+......+++++.... .+ ++=|.=..|+.-+-.++|-|+++|+.+++++=
T Consensus 97 qGv~a~~~~~~~~~l~~~~~~~--~~-~lvLd~v~dP~NlGaI~Rta~a~G~~~vil~~ 152 (277)
T 3nk6_A 97 AKVFGIARVPRPARLADIAERG--GD-VVVLDGVKIVGNIGAIVRTSLALGAAGIVLVD 152 (277)
T ss_dssp CCEEEEEECCCCCCHHHHHHHC--SC-EEEEESCCCHHHHHHHHHHHHHTTCSEEEEES
T ss_pred CeEEEEEecCCCCCHHHHhccC--CC-EEEEEcCCCcchHHHHHHHHHHcCCCEEEEcC
Confidence 3444444444345778876542 24 66677788999999999999999999999976
No 127
>3qat_A Malonyl COA-acyl carrier protein transacylase; seattle structural genomics center for infectious disease, S bartonella, CAT-scratch disease; 1.60A {Bartonella henselae}
Probab=38.92 E-value=1.1e+02 Score=25.05 Aligned_cols=37 Identities=16% Similarity=0.226 Sum_probs=31.8
Q ss_pred EEEeecCHHHHHHHHHHHHHcCCc-EEEEeeccCCCCC
Q psy13219 78 QMYIFKDRALSLQMVQRAERSGYS-AIVITMDTAVLGS 114 (193)
Q Consensus 78 QlY~~~dr~~~~~ll~RAe~AG~~-AlvvTVD~pv~G~ 114 (193)
|+-+..+.+.++++.+++++.|.+ +..+.|+.|....
T Consensus 172 ~~visG~~~~l~~~~~~l~~~g~~~~~~L~v~~afHS~ 209 (318)
T 3qat_A 172 QIVISGEAKAVETAVEVASQKGAKRAVLLPVSAPFHSA 209 (318)
T ss_dssp EEEEEEEHHHHHHHHHHHHHTTCSEEEEETTSCCTTSG
T ss_pred CEEEeCCHHHHHHHHHHHHhcCCceEEECCCCCCCCCH
Confidence 667788999999999999999995 9999999876543
No 128
>3nvt_A 3-deoxy-D-arabino-heptulosonate 7-phosphate synth; bifunctional 3-deoxy-7-phosphoheptulonate synthase/chorismat listeria monocytogenes EGD-E; 1.95A {Listeria monocytogenes} PDB: 3tfc_A*
Probab=38.71 E-value=41 Score=29.17 Aligned_cols=36 Identities=11% Similarity=0.063 Sum_probs=18.8
Q ss_pred HHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEE
Q psy13219 40 VATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQM 79 (193)
Q Consensus 40 ~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQl 79 (193)
..+.+.|.+.|++++.+-+...+++.+.+. .-|+|+
T Consensus 196 ~~L~~~~~~~Gl~~~te~~d~~~~~~l~~~----vd~lkI 231 (385)
T 3nvt_A 196 KILKRVSDEYGLGVISEIVTPADIEVALDY----VDVIQI 231 (385)
T ss_dssp HHHHHHHHHHTCEEEEECCSGGGHHHHTTT----CSEEEE
T ss_pred HHHHHHHHHcCCEEEEecCCHHHHHHHHhh----CCEEEE
Confidence 444555555555555555555555555432 336666
No 129
>3ezo_A Malonyl COA-acyl carrier protein transacylase; ssgcid, acyl-carrier-protein S-malonyltransferase, acyltransferase, transferase; 2.05A {Burkholderia pseudomallei 1710B}
Probab=38.71 E-value=62 Score=26.77 Aligned_cols=37 Identities=19% Similarity=0.168 Sum_probs=32.0
Q ss_pred EEEeecCHHHHHHHHHHHHHcCC-cEEEEeeccCCCCC
Q psy13219 78 QMYIFKDRALSLQMVQRAERSGY-SAIVITMDTAVLGS 114 (193)
Q Consensus 78 QlY~~~dr~~~~~ll~RAe~AG~-~AlvvTVD~pv~G~ 114 (193)
|+-+..+.+.++++.+++++.|+ ++..+.|+.|....
T Consensus 172 ~~VisG~~~~l~~~~~~l~~~g~~~~~~L~v~~afHS~ 209 (318)
T 3ezo_A 172 QVVIAGTKAGIEKACEIAKEKGAKRALPLPVSAPFHSS 209 (318)
T ss_dssp EEEEEEEHHHHHHHHHHHHHTTCSEEEECSCSSCTTSG
T ss_pred CEEEeCCHHHHHHHHHHHHhCCCceEEECCCCCCcChH
Confidence 66788899999999999999999 88899998876643
No 130
>3ado_A Lambda-crystallin; L-gulonate 3-dehydrogenase, structural genomics, riken struc genomics/proteomics initiative, RSGI, acetylation; 1.70A {Oryctolagus cuniculus} PDB: 3adp_A* 3f3s_A*
Probab=38.67 E-value=77 Score=26.57 Aligned_cols=62 Identities=10% Similarity=-0.054 Sum_probs=45.6
Q ss_pred eeccCccccHHHHHhhCCCCceEEEEEeec----------------CHHHHHHHHHHHHHcCCcEEEEeeccCC-CCCc
Q psy13219 54 ILSLMSTTSLEEVRAQNPSTTLWLQMYIFK----------------DRALSLQMVQRAERSGYSAIVITMDTAV-LGSR 115 (193)
Q Consensus 54 ~lst~ss~s~eei~~~~~~~~~wfQlY~~~----------------dr~~~~~ll~RAe~AG~~AlvvTVD~pv-~G~R 115 (193)
+-|+.|+.++.+|++....-.+++=++++. +.+......+-+++.|-+.+++.=|+|- .+||
T Consensus 119 laSNTSsl~is~ia~~~~~p~r~ig~HffNP~~~m~LVEiv~g~~Ts~~~~~~~~~~~~~~gk~pv~v~kd~pGFi~NR 197 (319)
T 3ado_A 119 LSSSSSCLLPSKLFTGLAHVKQCIVAHPVNPPYYIPLVELVPHPETSPATVDRTHALMRKIGQSPVRVLKEIDGFVLNR 197 (319)
T ss_dssp EEECCSSCCHHHHHTTCTTGGGEEEEEECSSTTTCCEEEEEECTTCCHHHHHHHHHHHHHTTCEEEECSSCCTTTTHHH
T ss_pred eehhhhhccchhhhhhccCCCcEEEecCCCCccccchHHhcCCCCCcHHHHHHHHHHHHHhCCccCCcCCCCCCEeHHH
Confidence 346677889999998765433455555433 7788888888889999999888888874 4555
No 131
>3zen_D Fatty acid synthase; transferase, mycolic acid biosynthesis, multifunctional ENZY substrate channeling; HET: FMN; 7.50A {Mycobacterium smegmatis} PDB: 4b3y_A*
Probab=38.19 E-value=53 Score=36.11 Aligned_cols=91 Identities=15% Similarity=0.175 Sum_probs=55.3
Q ss_pred ceECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHH-------HhhCC-CCce-EEEEEee
Q psy13219 12 LTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEV-------RAQNP-STTL-WLQMYIF 82 (193)
Q Consensus 12 t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei-------~~~~~-~~~~-wfQlY~~ 82 (193)
+++|| ..||+.+||+..- .. -.+|.|..++|-.-.++..+..+.|++ .+..+ +.+. .=-+|..
T Consensus 422 ~~~lg---~~PIi~a~M~~~~-s~----~~LaaAVs~AGglG~l~~~g~~~~~~l~~~i~~~r~~~~~~~p~~vNl~~~~ 493 (3089)
T 3zen_D 422 TRLTG---RSPILLAGMTPTT-VD----AKIVAAAANAGHWAELAGGGQVTEQIFNDRIAELETLLEPGRAIQFNTLFLD 493 (3089)
T ss_dssp HHHHS---SCSEEECCCHHHH-TS----HHHHHHHHHTTCEEEECSTTCCSHHHHHHHHHHHHHHSCTTCCCEEEEECSC
T ss_pred hhhcC---CCCEEeCCCcCCc-CC----HHHHHHHHhCCCceeecCCCCCCHHHHHHHHHHHHHhcCCCCceeechhhcC
Confidence 45788 6799999987432 11 357788888888778866554444433 33332 2121 1122433
Q ss_pred cCH---HH-HHHHHHHHHHcC--CcEEEEeeccC
Q psy13219 83 KDR---AL-SLQMVQRAERSG--YSAIVITMDTA 110 (193)
Q Consensus 83 ~dr---~~-~~~ll~RAe~AG--~~AlvvTVD~p 110 (193)
... +. .+++++.+.++| +.+++++.|.|
T Consensus 494 p~~~~~~~g~~~~~~~~~~~g~~vdgv~~~aG~P 527 (3089)
T 3zen_D 494 PYLWKLQVGGKRLVQRARQSGAPIDGLVVSAGIP 527 (3089)
T ss_dssp HHHHHHHHHHHHHHHHHHHTTCSCCEEEEESSCC
T ss_pred hhhhhhccCHHHHHHHHHHcCCCceEEEEeCCCC
Confidence 221 00 147899999999 66699988887
No 132
>1ps9_A 2,4-dienoyl-COA reductase; iron-sulfur, TIM barrel, flavodoxin, flavin, electron transfer, hydride transfer, oxidoreductase; HET: FAD FMN NAP MDE; 2.20A {Escherichia coli} SCOP: c.1.4.1 c.3.1.1 c.4.1.1
Probab=38.06 E-value=2.3e+02 Score=25.62 Aligned_cols=21 Identities=14% Similarity=-0.035 Sum_probs=17.3
Q ss_pred CcceECCceeCCceeecchhc
Q psy13219 10 SGLTVLGTRYRCPVGIAPSAM 30 (193)
Q Consensus 10 ~~t~~lG~~~~~P~~iaP~g~ 30 (193)
...+|=+.++.-+|+.|||+.
T Consensus 7 ~p~~ig~~~l~nRi~~apm~~ 27 (671)
T 1ps9_A 7 APLDLGFTTLKNRVLMGSMHT 27 (671)
T ss_dssp CCEECSSCEESSSEEECCCCC
T ss_pred CCeeECCEEEcCceEECCccC
Confidence 346777889999999999975
No 133
>2wje_A CPS4B, tyrosine-protein phosphatase CPSB; capsule biogenesis/degradation, manganese, hydrolase, exopolysaccharide synthesis; 1.90A {Streptococcus pneumoniae} PDB: 2wjd_A 2wjf_A 3qy8_A
Probab=38.01 E-value=18 Score=28.69 Aligned_cols=27 Identities=26% Similarity=0.281 Sum_probs=21.8
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 84 DRALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 84 dr~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
+.+.+.+++++|.+.|++.|++|==.+
T Consensus 22 ~~e~~~e~i~~A~~~Gi~~i~~TdH~~ 48 (247)
T 2wje_A 22 SREESKALLAESYRQGVRTIVSTSHRR 48 (247)
T ss_dssp SHHHHHHHHHHHHHTTEEEEECCCEEB
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCCC
Confidence 446677899999999999999985444
No 134
>2uv8_G Fatty acid synthase subunit beta (FAS1); fatty acid biosynthesis, malonyl/palmitoyl transferase, phosphopantetheine, transferase; HET: GVL FMN; 3.10A {Saccharomyces cerevisiae} PDB: 2vkz_G* 3hmj_G*
Probab=37.69 E-value=79 Score=33.44 Aligned_cols=87 Identities=11% Similarity=0.116 Sum_probs=51.5
Q ss_pred ceECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHHH-------hhC-CCCceEEEEEee-
Q psy13219 12 LTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVR-------AQN-PSTTLWLQMYIF- 82 (193)
Q Consensus 12 t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~-------~~~-~~~~~wfQlY~~- 82 (193)
|++||+ .||+.+||+.. -.+-.++.|+.++|-.-+|...+..+.|++. +.. ++.+ |++-+.
T Consensus 584 t~llg~---~PIi~~gM~~~-----~~~~~lvaAvsnAGglg~l~~~~~~~~e~l~~~I~~~~~~t~~~~~--~gvN~~~ 653 (2051)
T 2uv8_G 584 SKLIGR---PPLLVPGMTPC-----TVSPDFVAATTNAGYTIELAGGGYFSAAGMTAAIDSVVSQIEKGST--FGINLIY 653 (2051)
T ss_dssp HHHHSS---CSEEECCCHHH-----HTCHHHHHHHHHTTCEEEEEGGGCCSHHHHHHHHHHHHHHSCTTCC--EEEEEET
T ss_pred HHhhCc---cceecCCCccc-----cccHHHHHHHHcCCcEEEEccCCCCCHHHHHHHHHHHHHhcCCCCc--eEEEEee
Confidence 567993 59999998722 1234568888888877777554445544443 222 2223 343321
Q ss_pred cCH---HHHHHHHHHHHHcCCcEEEEeec
Q psy13219 83 KDR---ALSLQMVQRAERSGYSAIVITMD 108 (193)
Q Consensus 83 ~dr---~~~~~ll~RAe~AG~~AlvvTVD 108 (193)
.++ ....++++.+.+.|++.-.||+-
T Consensus 654 ~~~~~~~~~~~~~~~~~~~gv~i~~v~~~ 682 (2051)
T 2uv8_G 654 VNPFMLQWGIPLIKELRSKGYPIQFLTIG 682 (2051)
T ss_dssp TCTTHHHHHHHHHHHHHHTTCSEEEEEEE
T ss_pred cChhhhhhhHHHHHHHHHcCCCcceEEec
Confidence 122 11238899999999998444443
No 135
>1uta_A FTSN, MSGA, cell division protein FTSN; bacterial cell division protein, RNP domain, transmembrane, inner membrane, repeat; NMR {Escherichia coli} SCOP: d.58.52.1
Probab=37.37 E-value=32 Score=22.46 Aligned_cols=35 Identities=9% Similarity=0.112 Sum_probs=30.8
Q ss_pred CCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEE
Q psy13219 71 PSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVI 105 (193)
Q Consensus 71 ~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~Alvv 105 (193)
+.+..+.|+=-+++++..+.+.++.+..|+.+.+.
T Consensus 6 ~~~~~~vQvGaF~~~~~A~~l~~~L~~~G~~a~i~ 40 (81)
T 1uta_A 6 DERRWMVQCGSFRGAEQAETVRAQLAFEGFDSKIT 40 (81)
T ss_dssp CCCBCCCBCCEESCHHHHHHHHHHHHHHTCCEEEE
T ss_pred CCccEEEEEEEcCCHHHHHHHHHHHHhCCCCeEEE
Confidence 34567899999999999999999999999998876
No 136
>3can_A Pyruvate-formate lyase-activating enzyme; structural genomics, pyruvate-formate lyase-activating enzym MCSG, APC20359.1; 1.80A {Bacteroides vulgatus atcc 8482}
Probab=37.22 E-value=1.2e+02 Score=22.16 Aligned_cols=82 Identities=12% Similarity=0.073 Sum_probs=49.0
Q ss_pred hhccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEEEeec-CH-----------HHHHHHHHHH
Q psy13219 28 SAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMYIFK-DR-----------ALSLQMVQRA 95 (193)
Q Consensus 28 ~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY~~~-dr-----------~~~~~ll~RA 95 (193)
+|+=-+.||+--..+.+.|.+.|+...+.|.++.+-|.+....+. ..++++-+.. |. +.+.+-++++
T Consensus 10 tGGEPll~~~~~~~l~~~~~~~g~~~~l~TNG~l~~~~~~~l~~~-~d~v~isld~~~~~~~~~~~g~~~~~i~~~i~~l 88 (182)
T 3can_A 10 CGGEPLLHPEFLIDILKRCGQQGIHRAVDTTLLARKETVDEVMRN-CELLLIDLKSMDSTVHQTFCDVPNELILKNIRRV 88 (182)
T ss_dssp CSSTGGGSHHHHHHHHHHHHHTTCCEEEECTTCCCHHHHHHHHHT-CSEEEEECCCSCHHHHHHHHSSCSHHHHHHHHHH
T ss_pred EcccccCCHHHHHHHHHHHHHCCCcEEEECCCCCCHHHHHHHHhh-CCEEEEECCCCCHHHHHHHhCCCHHHHHHHHHHH
Confidence 344456677654577888888899999998887653333221111 2346665544 23 3344556777
Q ss_pred HHcCCcEEEEeeccC
Q psy13219 96 ERSGYSAIVITMDTA 110 (193)
Q Consensus 96 e~AG~~AlvvTVD~p 110 (193)
.++|.+..+-++=.|
T Consensus 89 ~~~g~~v~i~~~v~~ 103 (182)
T 3can_A 89 AEADFPYYIRIPLIE 103 (182)
T ss_dssp HHTTCCEEEEEEECB
T ss_pred HhCCCeEEEEEEEEC
Confidence 778887665554444
No 137
>3p6l_A Sugar phosphate isomerase/epimerase; TIM barrel, structural genomics, joint center for structural genomics, JCSG; HET: CIT; 1.85A {Parabacteroides distasonis}
Probab=37.13 E-value=59 Score=25.22 Aligned_cols=29 Identities=14% Similarity=0.098 Sum_probs=21.5
Q ss_pred EEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 78 QMYIFKDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 78 QlY~~~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
..|...+.+..++.++.|++.|++.|++.
T Consensus 83 ~~~~~~~~~~~~~~i~~A~~lGa~~v~~~ 111 (262)
T 3p6l_A 83 GVYVAEKSSDWEKMFKFAKAMDLEFITCE 111 (262)
T ss_dssp EEECCSSTTHHHHHHHHHHHTTCSEEEEC
T ss_pred eccCCccHHHHHHHHHHHHHcCCCEEEec
Confidence 33444566777888888888888888875
No 138
>3obe_A Sugar phosphate isomerase/epimerase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=37.03 E-value=9.5 Score=31.23 Aligned_cols=35 Identities=20% Similarity=0.233 Sum_probs=20.7
Q ss_pred ceEEEEEeecCH--HHHHHHHHHHHHcCCcEEEEeec
Q psy13219 74 TLWLQMYIFKDR--ALSLQMVQRAERSGYSAIVITMD 108 (193)
Q Consensus 74 ~~wfQlY~~~dr--~~~~~ll~RAe~AG~~AlvvTVD 108 (193)
..-+|+|-.++. +-..+.+++|+++||++|=+...
T Consensus 22 ~~g~~~~s~~~~~~~~l~~~l~~aa~~G~~~VEl~~~ 58 (305)
T 3obe_A 22 KMGLQTYSLGQELLQDMPNGLNRLAKAGYTDLEIFGY 58 (305)
T ss_dssp CCEEEGGGGTHHHHTTHHHHHHHHHHHTCCEEEECCB
T ss_pred ceEEEEEEchhhhhcCHHHHHHHHHHcCCCEEEeccc
Confidence 345666666654 23456666666667766666643
No 139
>1z4e_A Transcriptional regulator; nysgxrc target T2017, GNAT fold, structural genomics, PSI, P structure initiative; 2.00A {Bacillus halodurans} SCOP: d.108.1.1
Probab=36.49 E-value=33 Score=23.70 Aligned_cols=33 Identities=21% Similarity=0.258 Sum_probs=24.9
Q ss_pred EEEeecC-------HHHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 78 QMYIFKD-------RALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 78 QlY~~~d-------r~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
.+|+..+ +.+...+++.|++.|++.|.++|+.-
T Consensus 90 ~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~l~v~~~ 129 (153)
T 1z4e_A 90 GVRTHSAARGQGIGSQLVCWAIERAKERGCHLIQLTTDKQ 129 (153)
T ss_dssp EEEECTTSTTSSHHHHHHHHHHHHHHHTTEEEEEEEEETT
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEEccC
Confidence 5677654 45666777888889999999998753
No 140
>3t9y_A Acetyltransferase, GNAT family; PSI-biology, structural genomics, midwest center for structu genomics, MCSG; HET: PGE; 2.00A {Staphylococcus aureus}
Probab=36.36 E-value=37 Score=22.88 Aligned_cols=38 Identities=16% Similarity=0.118 Sum_probs=20.7
Q ss_pred HHHHHHHHHHHHcCCcEEEEeec--cCCCCCchhhhhcCC
Q psy13219 86 ALSLQMVQRAERSGYSAIVITMD--TAVLGSRYRDLKNKF 123 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~AlvvTVD--~pv~G~Re~d~r~~~ 123 (193)
.+...+++.|++.|++.+.++++ ..-...+.-=.|.||
T Consensus 100 ~ll~~~~~~~~~~g~~~i~l~~~~~~~N~~a~~~y~k~GF 139 (150)
T 3t9y_A 100 RLLADSEEFSKRLNCKAITLNSGNRNERLSAHKLYSDNGY 139 (150)
T ss_dssp HHHHHHHHHHHHTTCSCEEECCCCCC------------CC
T ss_pred HHHHHHHHHHHHcCCEEEEEEcCCCccchhHHHHHHHcCC
Confidence 46667777888889999999988 433322322334555
No 141
>3jvn_A Acetyltransferase; alpha-beta protein, structural genomics, PSI-2, protein STRU initiative, northeast structural genomics consortium, NESG; 2.61A {Vibrio fischeri}
Probab=36.34 E-value=34 Score=23.63 Aligned_cols=39 Identities=15% Similarity=0.085 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCC
Q psy13219 85 RALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKF 123 (193)
Q Consensus 85 r~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~ 123 (193)
+.++..+++.|++.|++.|.++|+..-...+.-=.|.||
T Consensus 107 ~~ll~~~~~~a~~~g~~~i~l~v~~~n~~a~~~y~k~GF 145 (166)
T 3jvn_A 107 EQLMMRIEQELKDYGVKEIFVEVWDFNKGALEFYNKQGL 145 (166)
T ss_dssp HHHHHHHHHHHHTTTCSEEEECCC--CCBC---------
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHcCC
Confidence 356667777788889999999997654333333334555
No 142
>2e6f_A Dihydroorotate dehydrogenase; chagas disease, pyrimidine biosynthesis, fumarate reductase, energy metabolism, redox homeostasis, flavoprotein; HET: FMN OXC; 1.26A {Trypanosoma cruzi} PDB: 2e6a_A* 2e6d_A* 2e68_A* 2djl_A* 2djx_A* 3c3n_A* 2b4g_A* 3c61_A* 3mhu_A* 3mjy_A*
Probab=36.27 E-value=38 Score=27.72 Aligned_cols=42 Identities=10% Similarity=-0.058 Sum_probs=30.7
Q ss_pred HHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcC-CcEEEEe
Q psy13219 64 EEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSG-YSAIVIT 106 (193)
Q Consensus 64 eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG-~~AlvvT 106 (193)
++|.++. +-+.+.-++..-|.+...++.++++++| +.+|.++
T Consensus 153 ~~vr~~~-~~Pv~vK~~~~~~~~~~~~~a~~~~~aG~~d~i~v~ 195 (314)
T 2e6f_A 153 QQVSLAY-GLPFGVKMPPYFDIAHFDTAAAVLNEFPLVKFVTCV 195 (314)
T ss_dssp HHHHHHH-CSCEEEEECCCCCHHHHHHHHHHHHTCTTEEEEEEC
T ss_pred HHHHHhc-CCCEEEEECCCCCHHHHHHHHHHHHhcCCceEEEEe
Confidence 3344433 3467777776667788888999999999 9998865
No 143
>2anu_A Hypothetical protein TM0559; predicted metal-dependent phosphoesterase (PHP famil structural genomics, joint center for structural genomics; 2.40A {Thermotoga maritima} SCOP: c.6.3.1
Probab=35.99 E-value=26 Score=27.81 Aligned_cols=20 Identities=20% Similarity=0.169 Sum_probs=17.8
Q ss_pred HHHHHHHHHHcCCcEEEEee
Q psy13219 88 SLQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvTV 107 (193)
.++++++|++.|++.|++|=
T Consensus 37 ~ee~v~~A~~~Gl~~i~iTD 56 (255)
T 2anu_A 37 LGEVVDLFGKHGVDVVSITD 56 (255)
T ss_dssp HHHHHHHHHHTTCSEEEEEE
T ss_pred HHHHHHHHHHCCCCEEEEcC
Confidence 46799999999999999983
No 144
>2zsk_A PH1733, 226AA long hypothetical aspartate racemase; alpha/beta fold, unknown function; 2.55A {Pyrococcus horikoshii}
Probab=35.83 E-value=26 Score=27.42 Aligned_cols=39 Identities=21% Similarity=0.399 Sum_probs=28.7
Q ss_pred HHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCCCCC
Q psy13219 87 LSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFTMPP 127 (193)
Q Consensus 87 ~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~~p~ 127 (193)
.+.+.+++.+++|+++|++...+.... -.++|..+.+|.
T Consensus 61 ~l~~~~~~L~~~g~d~iviaCnTa~~~--~~~l~~~~~iPv 99 (226)
T 2zsk_A 61 ILINAAKALERAGAELIAFAANTPHLV--FDDVQREVNVPM 99 (226)
T ss_dssp HHHHHHHHHHHHTCSEEEESSSGGGGG--HHHHHHHCSSCB
T ss_pred HHHHHHHHHHHcCCCEEEECCCcHHHH--HHHHHHhCCCCE
Confidence 344566677789999999999988654 356777777763
No 145
>1rpx_A Protein (ribulose-phosphate 3-epimerase); chloroplast, calvin cycle, oxidative pentose PH pathway; 2.30A {Solanum tuberosum} SCOP: c.1.2.2
Probab=35.67 E-value=1.5e+02 Score=22.75 Aligned_cols=41 Identities=15% Similarity=0.250 Sum_probs=27.8
Q ss_pred HHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEeec
Q psy13219 63 LEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMD 108 (193)
Q Consensus 63 ~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD 108 (193)
++++.+.. +.+...-+|+. | ..+.++.|.++|+..+.+..+
T Consensus 60 i~~l~~~~-~~~~~v~l~vn-d---~~~~v~~~~~~Gad~v~vh~~ 100 (230)
T 1rpx_A 60 VDSLRPIT-DLPLDVHLMIV-E---PDQRVPDFIKAGADIVSVHCE 100 (230)
T ss_dssp HHHHGGGC-CSCEEEEEESS-S---HHHHHHHHHHTTCSEEEEECS
T ss_pred HHHHHhcc-CCcEEEEEEec-C---HHHHHHHHHHcCCCEEEEEec
Confidence 44555443 23556667765 3 336788888999999988887
No 146
>2ha8_A TAR (HIV-1) RNA loop binding protein; methyltransferase, structural genomics, structural genomics consortium, SGC, RNA binding protein; HET: SAH; 1.60A {Homo sapiens}
Probab=35.63 E-value=35 Score=26.13 Aligned_cols=78 Identities=14% Similarity=0.236 Sum_probs=45.3
Q ss_pred ccccCCchHHHHHHHHHhccCceeee-ccCccccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEeec
Q psy13219 30 MQKLAHADGEVATARAAGMMDAIMIL-SLMSTTSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMD 108 (193)
Q Consensus 30 ~~~l~~~~gE~~~araA~~~g~~~~l-st~ss~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD 108 (193)
+.++-+|.-==+++|.|..+|+-.++ +.....+.+.+..++-+...|+.++..+ .....+.++..++.||.-+..+.+
T Consensus 31 Ld~i~dp~NlGaI~Rta~a~G~~~vil~~~~~~~~k~~~r~s~ga~~~l~~~~~~-~~~~~~~l~~lk~~g~~i~~~~~~ 109 (184)
T 2ha8_A 31 ASLIDKPTNLGGLCRTCEVFGASVLVVGSLQCISDKQFQHLSVSAEQWLPLVEVK-PPQLIDYLQQKKTEGYTIIGVEQT 109 (184)
T ss_dssp CTTCCCHHHHHHHHHHHHHTTCSEEEESCGGGGGSHHHHHHHTTGGGTSCEEECC-GGGHHHHHHHHHHTTCEEEEECCC
T ss_pred EcCCCCCCcHHHHHHHHHHhCCCEEEECCCCCCCcccceeecCCccceEEEEEEc-CCCHHHHHHHHHHCCCEEEEEECC
Confidence 34554544334889999999986544 3322334445533322345566665431 122356777888899987777654
No 147
>1y0e_A Putative N-acetylmannosamine-6-phosphate 2-epimer; mannac-6-P epimerase, NANE, structural genomics, protein STR initiative, PSI; 1.95A {Staphylococcus aureus subsp} SCOP: c.1.2.5
Probab=35.37 E-value=24 Score=27.21 Aligned_cols=25 Identities=16% Similarity=0.131 Sum_probs=18.7
Q ss_pred ecCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 82 FKDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 82 ~~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
+.+++.+.++.++++++|+..+-+.
T Consensus 19 ~~~~~~~~~~a~~~~~~Ga~~i~~~ 43 (223)
T 1y0e_A 19 LHSSFIMSKMALAAYEGGAVGIRAN 43 (223)
T ss_dssp TCCHHHHHHHHHHHHHHTCSEEEEE
T ss_pred CCCCccHHHHHHHHHHCCCeeeccC
Confidence 3467777888888888888877664
No 148
>3ojc_A Putative aspartate/glutamate racemase; structural genomics, csgid, center for structural genomics O infectious diseases, alpha beta; 1.75A {Yersinia pestis}
Probab=34.41 E-value=20 Score=28.49 Aligned_cols=40 Identities=18% Similarity=0.210 Sum_probs=30.1
Q ss_pred HHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCCCCC
Q psy13219 86 ALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFTMPP 127 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~~p~ 127 (193)
..+.+.+++.+++|+++|++...+....- .++|..+.+|.
T Consensus 63 ~~l~~~~~~L~~~g~~~iviaCNTa~~~~--~~l~~~~~iPv 102 (231)
T 3ojc_A 63 QLLSNAAISLKHAGAEVIVVCTNTMHKVA--DDIEAACGLPL 102 (231)
T ss_dssp HHHHHHHHHHHHHTCCEEEECSSGGGGGH--HHHHHHHCSCB
T ss_pred HHHHHHHHHHHhcCCCEEEEeCCchHHHH--HHHHHhCCCCE
Confidence 34556677778899999999999876543 56777777763
No 149
>1mzh_A Deoxyribose-phosphate aldolase; alpha-beta barrel, structural genomics, PSI, protein structure initiative; 2.00A {Aquifex aeolicus} SCOP: c.1.10.1
Probab=34.18 E-value=1.7e+02 Score=22.86 Aligned_cols=38 Identities=13% Similarity=0.208 Sum_probs=23.0
Q ss_pred HHHHhhCCCCceEEEEEe---ecCHHHHHHHHHHHHHcCCcEE
Q psy13219 64 EEVRAQNPSTTLWLQMYI---FKDRALSLQMVQRAERSGYSAI 103 (193)
Q Consensus 64 eei~~~~~~~~~wfQlY~---~~dr~~~~~ll~RAe~AG~~Al 103 (193)
++|.++.+ +.+.-+.. .-+.+...++.+.|+++|+..|
T Consensus 109 ~~v~~a~~--pv~vKvi~e~~~l~~~~~~~~a~~a~eaGad~I 149 (225)
T 1mzh_A 109 KEIFRETP--SAVHKVIVETPYLNEEEIKKAVEICIEAGADFI 149 (225)
T ss_dssp HHHHHTCT--TSEEEEECCGGGCCHHHHHHHHHHHHHHTCSEE
T ss_pred HHHHHHhc--CceEEEEEeCCCCCHHHHHHHHHHHHHhCCCEE
Confidence 34444443 44555522 1245567778888888888887
No 150
>2otd_A Glycerophosphodiester phosphodiesterase; structural genomics PSI-2, protein structure initiative, midwest center for STR genomics, hydrolase; 2.60A {Shigella flexneri}
Probab=34.16 E-value=50 Score=25.99 Aligned_cols=58 Identities=19% Similarity=0.210 Sum_probs=37.8
Q ss_pred eeeeccCccccHHHHHhhCCCCceEEEEEee--cC-----------------HHHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 52 IMILSLMSTTSLEEVRAQNPSTTLWLQMYIF--KD-----------------RALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 52 ~~~lst~ss~s~eei~~~~~~~~~wfQlY~~--~d-----------------r~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
..++||+....++.+.+..|.-+.. +++-. .+ ...+.+++++++++|.+..+.|||.+
T Consensus 142 ~v~i~Sf~~~~l~~~~~~~p~~~~~-~l~~~~~~~~~~~~~~~~~~~i~~~~~~~~~~~v~~~~~~G~~v~~wTvn~~ 218 (247)
T 2otd_A 142 PPLLSSFEIDALEAAQQAAPELPRG-LLLDEWRDDWRELTARLGCVSIHLNHKLLDKARVMQLKDAGLRILVYTVNKP 218 (247)
T ss_dssp CCEEEESCHHHHHHHHHHCTTSCEE-EEESSCCTTHHHHHHHHTCSEEEEEGGGCCHHHHHHHHHTTCEEEEECCCCH
T ss_pred CEEEEcCCHHHHHHHHHHCCCCCEE-EEecCCcccHHHHHHHcCCeEEecChHhCCHHHHHHHHHCCCEEEEEccCCH
Confidence 6788999888888888776643322 22221 11 12235678888888888888888754
No 151
>3k89_A Malonyl COA-ACP transacylase; bacterial blight, XOO0880, FABD, xanthomonas oryzae PV. ORYZ KACC10331, transferase; 1.60A {Xanthomonas oryzae PV} PDB: 3een_A 3r97_A*
Probab=33.75 E-value=91 Score=25.60 Aligned_cols=37 Identities=16% Similarity=0.116 Sum_probs=32.0
Q ss_pred EEEeecCHHHHHHHHHHHHHcCCc-EEEEeeccCCCCC
Q psy13219 78 QMYIFKDRALSLQMVQRAERSGYS-AIVITMDTAVLGS 114 (193)
Q Consensus 78 QlY~~~dr~~~~~ll~RAe~AG~~-AlvvTVD~pv~G~ 114 (193)
|+-+..+.+.++++.+++++.|++ +..+.|+.|..-.
T Consensus 168 ~~visG~~~~l~~~~~~l~~~g~~~~~~L~v~~afHS~ 205 (314)
T 3k89_A 168 QIVIGGDAAAVDRALALLAERGVRKAVKLAVSVPSHTP 205 (314)
T ss_dssp EEEEEEEHHHHHHHHHHHHHTTCCCEEECSCCCCTTSG
T ss_pred CEEEecCHHHHHHHHHHHHhcCCCeEEECCCCCCCChH
Confidence 677888999999999999999986 9999999876643
No 152
>1f76_A Dihydroorotate dehydrogenase; monomer, alpha-beta-barrel, FMN binding domain, orotate complex, oxidoreductase; HET: MSE FMN ORO; 2.50A {Bacteria} SCOP: c.1.4.1
Probab=33.74 E-value=42 Score=27.85 Aligned_cols=36 Identities=8% Similarity=0.035 Sum_probs=27.2
Q ss_pred CCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEee
Q psy13219 72 STTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 72 ~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTV 107 (193)
+-+.+.-+-..-+.+.+.++.++++++|+.+|.|+-
T Consensus 211 ~~Pv~vKi~~~~~~~~~~~~a~~l~~~Gvd~i~vsn 246 (336)
T 1f76_A 211 YVPIAVKIAPDLSEEELIQVADSLVRHNIDGVIATN 246 (336)
T ss_dssp CCCEEEECCSCCCHHHHHHHHHHHHHTTCSEEEECC
T ss_pred cCceEEEecCCCCHHHHHHHHHHHHHcCCcEEEEeC
Confidence 456676655444556778899999999999999873
No 153
>4evy_A Aminoglycoside N(6')-acetyltransferase type 1; center for structural genomics of infectious diseases (csgid national institute of allergy and infectious diseases; HET: TOY; 1.77A {Acinetobacter haemolyticus} PDB: 4f0y_A 4e8o_A
Probab=33.52 E-value=35 Score=23.97 Aligned_cols=33 Identities=12% Similarity=0.103 Sum_probs=24.4
Q ss_pred EEEeecC-------HHHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 78 QMYIFKD-------RALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 78 QlY~~~d-------r~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
.+|+..+ +.++..+++.|++.|++.|.++++..
T Consensus 100 ~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~ 139 (166)
T 4evy_A 100 GIYVLPAHRRSGVATMLIRQAEVWAKQFSCTEFASDAALD 139 (166)
T ss_dssp EEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred EEEEChhhhcCCHHHHHHHHHHHHHHHcCCCEEEEecCCC
Confidence 5566543 34666777778889999999999865
No 154
>2lci_A Protein OR36; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative, de novo protein; NMR {Artificial gene}
Probab=32.63 E-value=76 Score=22.36 Aligned_cols=31 Identities=23% Similarity=0.442 Sum_probs=24.3
Q ss_pred EEeecCHHHHHHHHHHHHHcCCcEEEEeecc
Q psy13219 79 MYIFKDRALSLQMVQRAERSGYSAIVITMDT 109 (193)
Q Consensus 79 lY~~~dr~~~~~ll~RAe~AG~~AlvvTVD~ 109 (193)
|.+..|..+.+++++-.-+.||+...+--|.
T Consensus 55 liisndkqllkemlelisklgykvflllqdq 85 (134)
T 2lci_A 55 LIISNDKQLLKEMLELISKLGYKVFLLLQDQ 85 (134)
T ss_dssp EEEESCHHHHHHHHHHHHHHTCCEEEEEECS
T ss_pred EEEcCcHHHHHHHHHHHHHhCceeEEEeecC
Confidence 4567888888888888888888888777774
No 155
>2yb1_A Amidohydrolase; HET: AMP; 1.90A {Chromobacterium violaceum} PDB: 2yb4_A
Probab=32.58 E-value=26 Score=28.70 Aligned_cols=28 Identities=14% Similarity=0.188 Sum_probs=21.3
Q ss_pred HHHHHHHHHHcCCcEEEEeeccCCCCCc
Q psy13219 88 SLQMVQRAERSGYSAIVITMDTAVLGSR 115 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvTVD~pv~G~R 115 (193)
.++++++|++.|+++|++|==....|..
T Consensus 19 ~~elv~~A~~~Gl~~iaiTDH~~~~g~~ 46 (292)
T 2yb1_A 19 PTEVIDRAAARAPALLALTDHDCTGGLA 46 (292)
T ss_dssp HHHHHHHHHTTCCSEEEECCBTCCTTHH
T ss_pred HHHHHHHHHHCCCCEEEEecCCccccHH
Confidence 4579999999999999999444444543
No 156
>1bo4_A Protein (serratia marcescens aminoglycoside-3-N- acetyltransferase); eubacterial aminoglyco resistance, GCN5-related N-acetyltransferase; HET: SPD COA; 2.30A {Serratia marcescens} SCOP: d.108.1.1
Probab=32.44 E-value=45 Score=22.94 Aligned_cols=25 Identities=24% Similarity=0.195 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 86 ALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
.+...+++.|++.|++.|.++++..
T Consensus 125 ~ll~~~~~~a~~~g~~~i~l~~~~~ 149 (168)
T 1bo4_A 125 ALINLLKHEANALGAYVIYVQADYG 149 (168)
T ss_dssp HHHHHHHHHHHHHTCCEEEEECCCS
T ss_pred HHHHHHHHHHHhCCCCEEEEEecCC
Confidence 4566677777788999999998864
No 157
>3noy_A 4-hydroxy-3-methylbut-2-EN-1-YL diphosphate synth; iron-sulfur protein, non-mevalonate pathway, terpene biosynt isoprenoid biosynthesis; 2.70A {Aquifex aeolicus}
Probab=32.33 E-value=36 Score=29.49 Aligned_cols=82 Identities=9% Similarity=0.129 Sum_probs=52.0
Q ss_pred HHHHHHhccCceeeeccCc-cccHHHHHhh-CCCCceEEEEEeecCHHHHHH---HHHHHHHcCCcEEEEeec---cCCC
Q psy13219 41 ATARAAGMMDAIMILSLMS-TTSLEEVRAQ-NPSTTLWLQMYIFKDRALSLQ---MVQRAERSGYSAIVITMD---TAVL 112 (193)
Q Consensus 41 ~~araA~~~g~~~~lst~s-s~s~eei~~~-~~~~~~wfQlY~~~dr~~~~~---ll~RAe~AG~~AlvvTVD---~pv~ 112 (193)
.+.++|++.|+|+-++..+ |.+ +++.+. .+..+ ....++ .++.+|+.||.-+++.+- .+..
T Consensus 124 ~vv~~ak~~~~piRIGvN~GSL~-~~ll~~yg~~~~----------eamVeSAl~~~~~~e~~gf~~iviS~K~S~v~~~ 192 (366)
T 3noy_A 124 EIVEEAKRRGVAVRIGVNSGSLE-KDLLEKYGYPSA----------EALAESALRWSEKFEKWGFTNYKVSIKGSDVLQN 192 (366)
T ss_dssp HHHHHHHHHTCEEEEEEEGGGCC-HHHHHHHSSCCH----------HHHHHHHHHHHHHHHHTTCCCEEEEEECSSHHHH
T ss_pred HHHHHHHHcCCCEEEecCCcCCC-HHHHHhcCCCCH----------HHHHHHHHHHHHHHHhCCCCeEEEeeecCChHHH
Confidence 7899999999999987443 333 233332 21111 334444 567778899999999994 3344
Q ss_pred CCchhhhhcCCCCCCccchhh
Q psy13219 113 GSRYRDLKNKFTMPPYLSLAN 133 (193)
Q Consensus 113 G~Re~d~r~~~~~p~~~~~~~ 133 (193)
=..+|.+......|.++...+
T Consensus 193 i~ayr~la~~~dyPLHlGvTE 213 (366)
T 3noy_A 193 VRANLIFAERTDVPLHIGITE 213 (366)
T ss_dssp HHHHHHHHHHCCCCEEECCSS
T ss_pred HHHHHHHHhccCCCEEEccCC
Confidence 445566665567787776544
No 158
>2y88_A Phosphoribosyl isomerase A; aromatic amino acid biosynthesis, TIM-barrel, His biosynthesis, tryptophan biosynthesis; HET: 2ER; 1.33A {Mycobacterium tuberculosis} PDB: 2y89_A 2y85_A*
Probab=32.31 E-value=1.1e+02 Score=23.63 Aligned_cols=19 Identities=26% Similarity=0.476 Sum_probs=14.4
Q ss_pred HHHHHHHHHHcCCcEEEEe
Q psy13219 88 SLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvT 106 (193)
..+++++++++|+..|++|
T Consensus 151 ~~e~~~~~~~~G~~~i~~~ 169 (244)
T 2y88_A 151 LWDVLERLDSEGCSRFVVT 169 (244)
T ss_dssp HHHHHHHHHHTTCCCEEEE
T ss_pred HHHHHHHHHhCCCCEEEEE
Confidence 4567778888888888776
No 159
>1o94_A Tmadh, trimethylamine dehydrogenase; electron transport, protein complex; HET: FMN ADP AMP; 2.0A {Methylophilus methylotrophus} SCOP: c.1.4.1 c.3.1.1 c.4.1.1 PDB: 1djn_A* 1o95_A* 2tmd_A* 1djq_A*
Probab=32.30 E-value=2.8e+02 Score=25.50 Aligned_cols=22 Identities=23% Similarity=0.238 Sum_probs=18.1
Q ss_pred CCCHHHHHHHHhcCCCCEEEec
Q psy13219 170 SVDWDDVRSLVQATKLPIVCKG 191 (193)
Q Consensus 170 ~~tW~di~wlr~~~~lPivlKG 191 (193)
...|+-++++|+.++.||+.=|
T Consensus 277 ~~~~~~~~~i~~~~~~pvi~~G 298 (729)
T 1o94_A 277 GHTIPWVKLVKQVSKKPVLGVG 298 (729)
T ss_dssp TTTHHHHHHHHTTCSSCEECCS
T ss_pred cccHHHHHHHHHHCCCEEEEeC
Confidence 3468889999999999998644
No 160
>4djd_D C/Fe-SP, corrinoid/iron-sulfur protein small subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_D* 4djf_D*
Probab=32.02 E-value=36 Score=28.90 Aligned_cols=88 Identities=10% Similarity=0.075 Sum_probs=49.5
Q ss_pred eCCceeecchhccccCCchHHHHHHHHHhccC--c-eeeeccCccccHHHHH---hhCCCCceEEEEEeecCHHHHHHHH
Q psy13219 19 YRCPVGIAPSAMQKLAHADGEVATARAAGMMD--A-IMILSLMSTTSLEEVR---AQNPSTTLWLQMYIFKDRALSLQMV 92 (193)
Q Consensus 19 ~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g--~-~~~lst~ss~s~eei~---~~~~~~~~wfQlY~~~dr~~~~~ll 92 (193)
+..|+.|- +-.++.-+..++++|.++| . +.+-| .+-..++++. +..+ .+.-. +. +.|-+..++++
T Consensus 128 ~~vPlsID-----g~~~~T~~~eV~eaAleagag~~~lINs-v~~~~~~~m~~laa~~g-~~vVl-mh-~~d~~~~~~l~ 198 (323)
T 4djd_D 128 VGVPLVVV-----GCGDVEKDHEVLEAVAEAAAGENLLLGN-AEQENYKSLTAACMVHK-HNIIA-RS-PLDINICKQLN 198 (323)
T ss_dssp CCSCEEEE-----CCSCHHHHHHHHHHHHHHTTTSCCEEEE-EBTTBCHHHHHHHHHHT-CEEEE-EC-SSCHHHHHHHH
T ss_pred CCceEEEE-----CCCCCCCCHHHHHHHHHhcCCCCCeEEE-CCcccHHHHHHHHHHhC-CeEEE-Ec-cchHHHHHHHH
Confidence 45666663 3335666677777777766 2 23333 2222234443 3222 12111 11 34678889999
Q ss_pred HHHHHcCC--cEEEEeeccCCCCCc
Q psy13219 93 QRAERSGY--SAIVITMDTAVLGSR 115 (193)
Q Consensus 93 ~RAe~AG~--~AlvvTVD~pv~G~R 115 (193)
++|+++|+ +-|++.-=.-.+|+.
T Consensus 199 ~~a~~~GI~~e~IIlDPg~g~fgk~ 223 (323)
T 4djd_D 199 ILINEMNLPLDHIVIDPSIGGLGYG 223 (323)
T ss_dssp HHHHTTTCCGGGEEEECCCCCTTTT
T ss_pred HHHHHcCCCHHHEEEeCCCccccCC
Confidence 99999999 668876444335554
No 161
>1o1z_A GDPD, glycerophosphodiester phosphodiesterase; TM1621, glycerophosphodiester phosphodiesterase (GDPD), STRU genomics, JCSG, PSI; 1.60A {Thermotoga maritima} SCOP: c.1.18.3
Probab=31.98 E-value=1.3e+02 Score=23.47 Aligned_cols=22 Identities=14% Similarity=0.359 Sum_probs=18.6
Q ss_pred HHHHHHHHHcCCcEEEEeeccC
Q psy13219 89 LQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 89 ~~ll~RAe~AG~~AlvvTVD~p 110 (193)
.+++++++++|.+..+.|||.+
T Consensus 188 ~~~v~~~~~~G~~v~~wTvn~~ 209 (234)
T 1o1z_A 188 VEVLRSFRKKGIVIFVWTLNDP 209 (234)
T ss_dssp HHHHHHHHHTTCEEEEESCCCH
T ss_pred HHHHHHHHHcCCEEEEeCCCCH
Confidence 7788889999999999998764
No 162
>3l23_A Sugar phosphate isomerase/epimerase; structural genomics, JO center for structural genomics, JCSG, protein structure INI PSI-2; HET: MSE; 1.70A {Parabacteroides distasonis}
Probab=31.90 E-value=13 Score=30.26 Aligned_cols=20 Identities=20% Similarity=0.348 Sum_probs=11.0
Q ss_pred HHHHHHHHHcCCcEEEEeec
Q psy13219 89 LQMVQRAERSGYSAIVITMD 108 (193)
Q Consensus 89 ~~ll~RAe~AG~~AlvvTVD 108 (193)
+++-+.+++.|.+...+++.
T Consensus 62 ~~~~~~l~~~GL~v~~~~~~ 81 (303)
T 3l23_A 62 MDFKKMAEDAGLKIISSHVN 81 (303)
T ss_dssp HHHHHHHHHTTCEEEEEECC
T ss_pred HHHHHHHHHcCCeEEEEecc
Confidence 34444556667666555543
No 163
>1f6y_A 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; carbon dioxide fixation, cobalamin, methyltatrahydrofolate; 2.20A {Moorella thermoacetica} SCOP: c.1.21.2 PDB: 2e7f_A* 4djd_A* 4dje_A* 4djf_A* 2ogy_A*
Probab=31.44 E-value=85 Score=25.43 Aligned_cols=23 Identities=22% Similarity=0.351 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHcCCc--EEEEeec
Q psy13219 86 ALSLQMVQRAERSGYS--AIVITMD 108 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~--AlvvTVD 108 (193)
+..++++++|+++|++ -|++.-=
T Consensus 138 ~~~~~~~~~a~~~Gi~~~~IilDPg 162 (262)
T 1f6y_A 138 AFAMELVAAADEFGLPMEDLYIDPL 162 (262)
T ss_dssp HHHHHHHHHHHHHTCCGGGEEEECC
T ss_pred HHHHHHHHHHHHCCCCcccEEEeCC
Confidence 5567899999999997 6776533
No 164
>3qy7_A Tyrosine-protein phosphatase YWQE; TIM barrel, polymerase and histindinol phosphatase(PHP)-like phosphatase, hydrolase; 1.62A {Bacillus subtilis} PDB: 3qy6_A
Probab=31.38 E-value=34 Score=27.77 Aligned_cols=26 Identities=35% Similarity=0.425 Sum_probs=20.8
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEeecc
Q psy13219 84 DRALSLQMVQRAERSGYSAIVITMDT 109 (193)
Q Consensus 84 dr~~~~~ll~RAe~AG~~AlvvTVD~ 109 (193)
+.+.+.+++++|.+.|++.|++|=-.
T Consensus 18 ~~~~sl~~~~~a~~~G~~~i~~T~H~ 43 (262)
T 3qy7_A 18 DSADSIEMARAAVRQGIRTIIATPHH 43 (262)
T ss_dssp SHHHHHHHHHHHHHTTCCEEECCCBS
T ss_pred CHHHHHHHHHHHHHCCCCEEEECCCC
Confidence 34566679999999999999998544
No 165
>1aj0_A DHPS, dihydropteroate synthase; antibiotic, resistance, transferase, folate, biosynthesis; HET: PH2 SAN; 2.00A {Escherichia coli} SCOP: c.1.21.1 PDB: 1aj2_A* 1ajz_A 3tyz_A* 3tyu_A* 3tzf_A* 3tzn_A
Probab=31.26 E-value=1e+02 Score=25.38 Aligned_cols=27 Identities=15% Similarity=0.390 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHcCCc--EEEEeeccCCCCC
Q psy13219 85 RALSLQMVQRAERSGYS--AIVITMDTAVLGS 114 (193)
Q Consensus 85 r~~~~~ll~RAe~AG~~--AlvvTVD~pv~G~ 114 (193)
.+..++.+++|+++|++ -|++. |-+|.
T Consensus 162 ~~~l~~~i~~a~~~Gi~~~~IilD---Pg~gf 190 (282)
T 1aj0_A 162 NRYFIEQIARCEQAGIAKEKLLLD---PGFGF 190 (282)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEE---CCTTS
T ss_pred HHHHHHHHHHHHHcCCChhhEEEe---CCCCc
Confidence 56677889999999998 68887 55443
No 166
>3lod_A Putative acyl-COA N-acyltransferase; structural genomics, PSI2, MCSG, structure initiative; 2.50A {Klebsiella pneumoniae subsp}
Probab=31.19 E-value=36 Score=23.39 Aligned_cols=46 Identities=11% Similarity=0.133 Sum_probs=29.8
Q ss_pred EEEeecC-------HHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCC
Q psy13219 78 QMYIFKD-------RALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKF 123 (193)
Q Consensus 78 QlY~~~d-------r~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~ 123 (193)
.+|+..+ +.+...+++.|++.|++.|.++++..-...+.-=.|.||
T Consensus 79 ~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~~~GF 131 (162)
T 3lod_A 79 RVYIDPQHRGQQLGEKLLAALEAKARQRDCHTLRLETGIHQHAAIALYTRNGY 131 (162)
T ss_dssp EEEECTTSCSSSHHHHHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTC
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEEEecCCCHHHHHHHHHcCC
Confidence 6677554 246667777788889999999988653322333345566
No 167
>3g8w_A Lactococcal prophage PS3 protein 05; APC61042, acetyltransferase, staphylococcus epidermidis ATCC structural genomics; HET: NHE FLC; 2.70A {Staphylococcus epidermidis atcc 12228}
Probab=31.17 E-value=42 Score=23.31 Aligned_cols=38 Identities=13% Similarity=0.187 Sum_probs=25.0
Q ss_pred HHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCC
Q psy13219 86 ALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKF 123 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~ 123 (193)
.++..+++.|++.|++.|.++|...-..-+.-=.|.||
T Consensus 101 ~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF 138 (169)
T 3g8w_A 101 ELINHIIQYAKEQNIETLMIAIASNNISAKVFFSSIGF 138 (169)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHcCC
Confidence 35556677788889999999998754322222335555
No 168
>2hmc_A AGR_L_411P, dihydrodipicolinate synthase; alpha-beta barrel (TIM barrel), structural genomics, PSI-2, structure initiative; HET: MSE; 1.90A {Agrobacterium tumefaciens str}
Probab=31.15 E-value=1.4e+02 Score=25.14 Aligned_cols=85 Identities=11% Similarity=0.076 Sum_probs=48.6
Q ss_pred ceeecchhccccCCchHHHHHHHHHhccCce--eeeccCc---cccHHHHH---h--hCCCCceEEEEEeecCHHHHHHH
Q psy13219 22 PVGIAPSAMQKLAHADGEVATARAAGMMDAI--MILSLMS---TTSLEEVR---A--QNPSTTLWLQMYIFKDRALSLQM 91 (193)
Q Consensus 22 P~~iaP~g~~~l~~~~gE~~~araA~~~g~~--~~lst~s---s~s~eei~---~--~~~~~~~wfQlY~~~dr~~~~~l 91 (193)
|.++.|+--.+-++.++=..+++-..+.|+- ++.+|.+ +.|.||-. + ..+..+...++- ..+-+.+.++
T Consensus 32 ~alvTPF~~dg~ID~~~l~~lv~~li~~Gv~Gl~v~GtTGE~~~Ls~eEr~~vi~~~~~grvpViaGvg-~~st~eai~l 110 (344)
T 2hmc_A 32 PALMTPCRQDRTPDFDALVRKGKELIADGMSAVVYCGSMGDWPLLTDEQRMEGVERLVKAGIPVIVGTG-AVNTASAVAH 110 (344)
T ss_dssp EBCCCCBCTTSSBCHHHHHHHHHHHHHTTCCCEEESSGGGTGGGSCHHHHHHHHHHHHHTTCCEEEECC-CSSHHHHHHH
T ss_pred EeeeCCCCCCCCcCHHHHHHHHHHHHHcCCCEEEeCccCcChhhCCHHHHHHHHHHHhCCCCcEEEecC-CCCHHHHHHH
Confidence 4555665433334555445666655556653 3445433 44554432 1 123344455442 2355677889
Q ss_pred HHHHHHcCCcEEEEee
Q psy13219 92 VQRAERSGYSAIVITM 107 (193)
Q Consensus 92 l~RAe~AG~~AlvvTV 107 (193)
.+.|+++|+.++++..
T Consensus 111 a~~A~~~Gadavlv~~ 126 (344)
T 2hmc_A 111 AVHAQKVGAKGLMVIP 126 (344)
T ss_dssp HHHHHHHTCSEEEECC
T ss_pred HHHHHhcCCCEEEECC
Confidence 9999999999999873
No 169
>2g0w_A LMO2234 protein; putative sugar isomerase, structural genomics, joint center structural genomics, JCSG, protein structure initiative; HET: MSE PG4; 1.70A {Listeria monocytogenes} SCOP: c.1.15.4
Probab=31.09 E-value=1.5e+02 Score=23.46 Aligned_cols=94 Identities=12% Similarity=0.058 Sum_probs=43.1
Q ss_pred ceECCceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccC-----ccccHHHHHhhCC-CCceEEEEEee---
Q psy13219 12 LTVLGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLM-----STTSLEEVRAQNP-STTLWLQMYIF--- 82 (193)
Q Consensus 12 t~~lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~-----ss~s~eei~~~~~-~~~~wfQlY~~--- 82 (193)
|.--|...+.++.++...+..-...+.-+..++.++-.++=+..... ....++++.+... .+....-+..+
T Consensus 14 ~~~~~~~~~~klgi~~~~~~~~~~~~~~l~~a~~~G~~~vEl~~~~~~~~~~~~~~~~~~~~~l~~~gl~i~~~~~~~~~ 93 (296)
T 2g0w_A 14 TNANGNLKKCPITISSYTLGTEVSFPKRVKVAAENGFDGIGLRAENYVDALAAGLTDEDMLRILDEHNMKVTEVEYITQW 93 (296)
T ss_dssp --------CCCEEECGGGGTTTSCHHHHHHHHHHTTCSEEEEEHHHHHHHHHTTCCHHHHHHHHHHTTCEEEEEECBCCC
T ss_pred ccCCCCcCCCCceeechhcCCCCCHHHHHHHHHHcCCCEEEeCHHHHHHHHhcCCcHHHHHHHHHHcCCceEeehhhhcc
Confidence 44457777888999887765411112223333333333443333211 2235555544321 12222222211
Q ss_pred --cC------HHHHHHHHHHHHHcCCcEEEE
Q psy13219 83 --KD------RALSLQMVQRAERSGYSAIVI 105 (193)
Q Consensus 83 --~d------r~~~~~ll~RAe~AG~~Alvv 105 (193)
.| .+..++.++.|++.|++.|++
T Consensus 94 ~~~~~~~~~~~~~~~~~i~~A~~lGa~~v~~ 124 (296)
T 2g0w_A 94 GTAEDRTAEQQKKEQTTFHMARLFGVKHINC 124 (296)
T ss_dssp SSTTTCCHHHHHHHHHHHHHHHHHTCCEEEE
T ss_pred ccCChHHHHHHHHHHHHHHHHHHcCCCEEEE
Confidence 12 135578899999999999877
No 170
>1vkc_A Putative acetyl transferase; structural genomics, pyrococcus furiosus southeast collaboratory for structural genomics, secsg; 1.89A {Pyrococcus furiosus} SCOP: d.108.1.1
Probab=30.89 E-value=51 Score=22.82 Aligned_cols=46 Identities=15% Similarity=0.116 Sum_probs=30.2
Q ss_pred EEEeecC-------HHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCC
Q psy13219 78 QMYIFKD-------RALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFT 124 (193)
Q Consensus 78 QlY~~~d-------r~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~ 124 (193)
.+|+..+ +.+...+++.|++.|++.|.++++..- ..+.-=.|.||.
T Consensus 96 ~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n-~a~~~y~k~GF~ 148 (158)
T 1vkc_A 96 DIEVVKWARGLGIGSALLRKAEEWAKERGAKKIVLRVEIDN-PAVKWYEERGYK 148 (158)
T ss_dssp EEEECGGGTTSSHHHHHHHHHHHHHHHTTCSCEEECCCTTC-THHHHHHHTTCC
T ss_pred EEEECHHHhCCCHHHHHHHHHHHHHHHcCCcEEEEEEeCCC-cHHHHHHHCCCE
Confidence 5566543 346667777888889999999988654 333333456663
No 171
>3no3_A Glycerophosphodiester phosphodiesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: MSE; 1.89A {Parabacteroides distasonis} SCOP: c.1.18.0
Probab=30.80 E-value=70 Score=25.16 Aligned_cols=70 Identities=11% Similarity=-0.006 Sum_probs=44.5
Q ss_pred HHHHHHHhccCc--eeeeccCccccHHHHHhhCCCCceEEEEEe---------------ecCHH---HHHHHHHHHHHcC
Q psy13219 40 VATARAAGMMDA--IMILSLMSTTSLEEVRAQNPSTTLWLQMYI---------------FKDRA---LSLQMVQRAERSG 99 (193)
Q Consensus 40 ~~~araA~~~g~--~~~lst~ss~s~eei~~~~~~~~~wfQlY~---------------~~dr~---~~~~ll~RAe~AG 99 (193)
..+++.-.+.|. ..+++|+....++.+.+..|..+.- .|+- .-+.. .+.+++++|+++|
T Consensus 118 ~~v~~~l~~~~~~~~v~~~Sf~~~~l~~~~~~~p~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~G 196 (238)
T 3no3_A 118 RLSVQMVKRMKLAKRTDYISFNMDACKEFIRLCPKSEVS-YLNGELSPMELKELGFTGLDYHYKVLQSHPDWVKDCKVLG 196 (238)
T ss_dssp HHHHHHHHHTTCGGGEEEEESCHHHHHHHHHHCTTSCEE-ECSSCSCHHHHHHTTCCEEEEEHHHHHHSTTHHHHHHHTT
T ss_pred HHHHHHHHHcCCcCCEEEEECCHHHHHHHHHHCCCCeEE-EEeCCCCHHHHHHCCCceEeccHHhhhCCHHHHHHHHHCC
Confidence 345555556554 4678888888888888776643221 1110 00111 1347899999999
Q ss_pred CcEEEEeeccC
Q psy13219 100 YSAIVITMDTA 110 (193)
Q Consensus 100 ~~AlvvTVD~p 110 (193)
.+..+.|||.+
T Consensus 197 ~~v~~WTVn~~ 207 (238)
T 3no3_A 197 MTSNVWTVDDP 207 (238)
T ss_dssp CEEEEECCCSH
T ss_pred CEEEEECCCCH
Confidence 99999999865
No 172
>1hjs_A Beta-1,4-galactanase; 4-galactanases, family 53 glycoside hydrolase, thermostability, PH optimum, CLAN GH-A, thermophIle, alkalophIle; HET: NAG EPE; 1.87A {Thielavia heterothallica} SCOP: c.1.8.3 PDB: 1hju_A* 1hjq_A*
Probab=30.73 E-value=1.4e+02 Score=24.89 Aligned_cols=59 Identities=12% Similarity=0.134 Sum_probs=40.1
Q ss_pred HHHhccCceeeeccCccccHHHHHhhCCCCceEEEEEee-------cCHHHHHHHHHHHHHcCCcEEE
Q psy13219 44 RAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMYIF-------KDRALSLQMVQRAERSGYSAIV 104 (193)
Q Consensus 44 raA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY~~-------~dr~~~~~ll~RAe~AG~~Alv 104 (193)
..-.++|.-|.-.+.......+|.+.. +..+.-+++. .|-+.+.++++||+++|.+.++
T Consensus 13 ~~~e~~g~~~~~~~G~~~d~~~ilk~~--G~N~VRi~~w~~P~~g~~~~~~~~~~~~~A~~~GlkV~l 78 (332)
T 1hjs_A 13 VVEERAGVSYKNTNGNAQPLENILAAN--GVNTVRQRVWVNPADGNYNLDYNIAIAKRAKAAGLGVYI 78 (332)
T ss_dssp HHHHHTTCCCBCTTSCBCCHHHHHHHT--TCCEEEEEECSSCTTCTTSHHHHHHHHHHHHHTTCEEEE
T ss_pred HHHHHcCCEEECCCCCcccHHHHHHHC--CCCEEEEeeeeCCCCCcCCHHHHHHHHHHHHHCCCEEEE
Confidence 344566777765555556667775553 3556667643 3678888999999999998655
No 173
>1xx1_A Smase I, sphingomyelinase I; structure, quick cryo-soaking, activity, smase D, hydrolase; HET: EPE; 1.75A {Loxosceles laeta} PDB: 2f9r_A*
Probab=30.73 E-value=28 Score=28.04 Aligned_cols=25 Identities=16% Similarity=0.292 Sum_probs=20.5
Q ss_pred HHHHHHHHHHHHcCC--cEEEEeeccC
Q psy13219 86 ALSLQMVQRAERSGY--SAIVITMDTA 110 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~--~AlvvTVD~p 110 (193)
.++.+++++++++|+ +..+-|||.+
T Consensus 209 ~~~~~~v~~~~~~Glg~~V~~WTvn~~ 235 (285)
T 1xx1_A 209 RLKEAIKSRDSANGFINKIYYWSVDKV 235 (285)
T ss_dssp HHHHHHHHHTSTTCCCCEEEEECCCSH
T ss_pred HHhHHHHHHHHhcCCCCeEEEeeCCCH
Confidence 355678888888999 9999999876
No 174
>3n8h_A Pantothenate synthetase; alpha-beta sandwich, ligase, structural genomics, structural of infectious diseases; HET: MSE AMP GOL; 2.00A {Francisella tularensis subsp} PDB: 3qtt_A*
Probab=30.63 E-value=1.3e+02 Score=24.73 Aligned_cols=67 Identities=15% Similarity=0.300 Sum_probs=45.0
Q ss_pred CceeecchhccccCCchHHHHHHHHHhccCceeeeccCccc----cHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHH
Q psy13219 21 CPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTT----SLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAE 96 (193)
Q Consensus 21 ~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~----s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe 96 (193)
..|++=||- ..| | +|.+.+.+.|.+.+=..++|-+-+- +-||+.. | ++|-+.- ++.++
T Consensus 24 ~~ig~VPTM-GaL-H-~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~EDl~~-----------Y-PRtle~D---~~ll~ 85 (264)
T 3n8h_A 24 QKIGFVPTM-GAL-H-NGHISLIKKAKSENDVVIVSIFVNPTQFNNPNDYQT-----------Y-PNQLQQD---IQILA 85 (264)
T ss_dssp SCEEEEEEC-SSC-C-HHHHHHHHHHHHHCSEEEEEECCCGGGCSCHHHHHH-----------S-CCCHHHH---HHHHH
T ss_pred CcEEEECCC-cch-h-HHHHHHHHHHHHhCCEEEEEEccCcccCCCcchhhc-----------C-CCCHHHH---HHHHH
Confidence 367777863 234 5 8999999999998877888877543 3576653 3 2333333 34457
Q ss_pred HcCCcEEEE
Q psy13219 97 RSGYSAIVI 105 (193)
Q Consensus 97 ~AG~~Alvv 105 (193)
++|+.+++.
T Consensus 86 ~~gvD~vF~ 94 (264)
T 3n8h_A 86 SLDVDVLFN 94 (264)
T ss_dssp HTTCSEEEC
T ss_pred HCCCCEEEC
Confidence 899987765
No 175
>2yva_A DNAA initiator-associating protein DIAA; intermolecular disulfide bonding, putative phosphosugar BIND protein, DNAA binding protein; 1.85A {Escherichia coli}
Probab=30.61 E-value=92 Score=23.09 Aligned_cols=36 Identities=11% Similarity=0.050 Sum_probs=27.6
Q ss_pred CceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEeec
Q psy13219 73 TTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMD 108 (193)
Q Consensus 73 ~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD 108 (193)
+...+=+-..+.-..+.+.++.|++.|++.|.||=.
T Consensus 110 ~DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~ 145 (196)
T 2yva_A 110 GDVLLAISTRGNSRDIVKAVEAAVTRDMTIVALTGY 145 (196)
T ss_dssp TCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 344454555666677788999999999999999964
No 176
>3f8k_A Protein acetyltransferase; GCN5-related N-acetyltransferase; HET: COA; 1.84A {Sulfolobus solfataricus P2}
Probab=30.40 E-value=42 Score=23.06 Aligned_cols=46 Identities=15% Similarity=0.160 Sum_probs=29.8
Q ss_pred EEEeecC-------HHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCC
Q psy13219 78 QMYIFKD-------RALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKF 123 (193)
Q Consensus 78 QlY~~~d-------r~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~ 123 (193)
.+|+..+ +.+...+++.|++.|++.+.++++..-...+.-=.|.||
T Consensus 78 ~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF 130 (160)
T 3f8k_A 78 SLVVHRNYRTLGIGTLLVKTLIEEAKKSGLSTVKFYTLPENTPMIKIGRKLGF 130 (160)
T ss_dssp EEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECTTCHHHHHHHHHHTC
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHHcCceEEEEEEcccCHHHHHHHHHcCC
Confidence 6777553 356677778888889999999988643222222235565
No 177
>2cxh_A Probable BRIX-domain ribosomal biogenesis protein; 18S rRNA, IMP4, U3 snoRNP, ribosomal biogenesis binding, structural genomics, NPPSFA; 1.80A {Aeropyrum pernix} SCOP: c.51.1.2
Probab=30.38 E-value=33 Score=27.44 Aligned_cols=68 Identities=15% Similarity=0.195 Sum_probs=36.0
Q ss_pred CCchHHHHHHHHHhccCceeeeccCcccc----HHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 34 AHADGEVATARAAGMMDAIMILSLMSTTS----LEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 34 ~~~~gE~~~araA~~~g~~~~lst~ss~s----~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
.|.+|+-....+..+-.+..+.|--.+.. ++|++...|+. -|+.+...-..++++.|+.-||..++|-
T Consensus 19 ~~~~g~~~~~~~~~~pKvLITTSr~pS~r~r~fakeL~~~lPns-----~~i~Rgk~sLkeL~e~a~~~~~tdlivV 90 (217)
T 2cxh_A 19 SHMLGGKGRPSGVGGYRILVTTSRRPSPRIRSFVKDLSATIPGA-----FRFTRGHYSMEELAREAIIRGADRIVVV 90 (217)
T ss_dssp --------------CCEEEEEESSSCCHHHHHHHHHHHTTSTTE-----EECCCTTCCHHHHHHHHHHTTEEEEEEE
T ss_pred cccccCcccccCCCCCeEEEEcCCCCCHHHHHHHHHHHHHCCCC-----EEeecCCcCHHHHHHHHHhCCCCEEEEE
Confidence 35556655554544555555555444433 46666666642 2777777777899999999999876654
No 178
>4djd_C C/Fe-SP, corrinoid/iron-sulfur protein large subunit; TIM barrel, rossmann fold, B12-dependent methyltransferase; HET: B12; 2.38A {Moorella thermoacetica} PDB: 4dje_C* 4djf_C*
Probab=30.33 E-value=72 Score=28.33 Aligned_cols=25 Identities=12% Similarity=0.121 Sum_probs=21.4
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEeec
Q psy13219 84 DRALSLQMVQRAERSGYSAIVITMD 108 (193)
Q Consensus 84 dr~~~~~ll~RAe~AG~~AlvvTVD 108 (193)
|-+..++++++|+++|++-|++.-=
T Consensus 210 dl~~lkelv~~a~~~GI~~IvLDPG 234 (446)
T 4djd_C 210 GLEELAELVDKIVALGHKQLVLDPG 234 (446)
T ss_dssp SHHHHHHHHHHHHHTTCCCEEEECC
T ss_pred cHHHHHHHHHHHHHCCCCcEEECCC
Confidence 8889999999999999998876543
No 179
>1u6m_A Acetyltransferase, GNAT family; structural genomics, PSI, protein structure initiative; 2.40A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=30.21 E-value=30 Score=25.44 Aligned_cols=46 Identities=20% Similarity=0.170 Sum_probs=29.4
Q ss_pred EEEeecC-------HHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCC
Q psy13219 78 QMYIFKD-------RALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKF 123 (193)
Q Consensus 78 QlY~~~d-------r~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~ 123 (193)
.||+..+ +.+++.+++.|++.|++.|.++|...-...+.==.|.||
T Consensus 117 ~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~N~~A~~fY~k~GF 169 (199)
T 1u6m_A 117 TISVDERFRGMGIGSKLLDALPEVAKASGKQALGLNVDFDNPGARKLYASKGF 169 (199)
T ss_dssp EEEECGGGTTSSHHHHHHHTHHHHHHTTTCSEEEEEEETTCHHHHHHHHTTTC
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHCCC
Confidence 6788553 345666677788899999999998643222222234566
No 180
>2cu0_A Inosine-5'-monophosphate dehydrogenase; structural genomics, pyrococcus horikoshii OT3, riken structural genomics/PROT initiative, RSGI; HET: XMP; 2.10A {Pyrococcus horikoshii} SCOP: c.1.5.1
Probab=30.20 E-value=23 Score=31.27 Aligned_cols=25 Identities=16% Similarity=0.113 Sum_probs=20.6
Q ss_pred CCCCCCcceECC-ceeCCceeecchh
Q psy13219 5 VCDRDSGLTVLG-TRYRCPVGIAPSA 29 (193)
Q Consensus 5 v~~~d~~t~~lG-~~~~~P~~iaP~g 29 (193)
.+++|++|++-+ ..+..||+.||+.
T Consensus 31 ~~~v~l~t~lt~~l~l~~PIi~a~m~ 56 (486)
T 2cu0_A 31 PKDVDVSTRITPNVKLNIPILSAAMD 56 (486)
T ss_dssp STTCBCCEEEETTEEESSSEEECCCT
T ss_pred cceEEEEeeecCCcccccceEEccce
Confidence 457888888864 7899999999976
No 181
>3s81_A Putative aspartate racemase; structural genomics, center for structural genomics of infec diseases, csgid, alpha beta fold, cytosol; 1.80A {Salmonella enterica subsp} PDB: 3s7z_A
Probab=30.14 E-value=26 Score=28.62 Aligned_cols=39 Identities=26% Similarity=0.261 Sum_probs=31.0
Q ss_pred HHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCCCC
Q psy13219 86 ALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFTMP 126 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~~p 126 (193)
+...+.+++.+++|+++||+.+.+.... -.++|..+.+|
T Consensus 86 ~~l~~~~~~L~~~Gad~IVIaCNTah~~--l~~lr~~~~iP 124 (268)
T 3s81_A 86 RYLERYLHMLEDAGAECIVIPCNTAHYW--FDDLQNVAKAR 124 (268)
T ss_dssp HHHHHHHHHHHHTTCSEEECSCSGGGGG--HHHHHHHCSSE
T ss_pred HHHHHHHHHHHHcCCCEEEEeCCCHHHH--HHHHHHHCCCC
Confidence 4456778888999999999999998663 45677777776
No 182
>1s3z_A Aminoglycoside 6'-N-acetyltransferase; GNAT, aminoglycoside ribostamycin; HET: COA RIO; 2.00A {Salmonella enteritidis} SCOP: d.108.1.1 PDB: 1s5k_A* 1s60_A* 2vbq_A*
Probab=30.12 E-value=45 Score=23.13 Aligned_cols=25 Identities=8% Similarity=0.110 Sum_probs=19.8
Q ss_pred HHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 86 ALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
.+...+++.|++.|++.+.++++..
T Consensus 115 ~ll~~~~~~~~~~g~~~i~l~~~~~ 139 (165)
T 1s3z_A 115 QLIAAVQRWGTNKGCREMASDTSPE 139 (165)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECTT
T ss_pred HHHHHHHHHHHHCCCCEEEEecCcC
Confidence 4566777777788999999998864
No 183
>3sz8_A 2-dehydro-3-deoxyphosphooctonate aldolase 2; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 2.05A {Burkholderia pseudomallei} PDB: 3tmq_A* 3und_A*
Probab=30.00 E-value=90 Score=25.94 Aligned_cols=47 Identities=13% Similarity=0.077 Sum_probs=33.8
Q ss_pred hccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEE
Q psy13219 29 AMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQM 79 (193)
Q Consensus 29 g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQl 79 (193)
+++++.-.+|=..+.+.|.+.|++++..-+...+++.+.+.. -|+|+
T Consensus 70 sf~G~g~~~GL~~L~~~~~e~Glp~~Tev~d~~~v~~l~~~v----d~lqI 116 (285)
T 3sz8_A 70 SYRGVGLDEGLKIFAEVKARFGVPVITDVHEAEQAAPVAEIA----DVLQV 116 (285)
T ss_dssp SCCCSCHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHTTC----SEEEE
T ss_pred CcCCcCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHhC----CEEEE
Confidence 455552134556789999999999999988888888886542 25665
No 184
>3igs_A N-acetylmannosamine-6-phosphate 2-epimerase 2; energy metabolism, sugars, csgid, carbohydrate metabolism, isomerase; HET: MSE 16G; 1.50A {Salmonella enterica subsp} SCOP: c.1.2.0
Probab=29.89 E-value=86 Score=24.78 Aligned_cols=64 Identities=20% Similarity=0.136 Sum_probs=38.0
Q ss_pred chHHHHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEE---------EEeecCHHHHHHHHHHHHHcCCcEEEE
Q psy13219 36 ADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQ---------MYIFKDRALSLQMVQRAERSGYSAIVI 105 (193)
Q Consensus 36 ~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQ---------lY~~~dr~~~~~ll~RAe~AG~~Alvv 105 (193)
++--..+|+|+.+.|... ++..+..-+++|.+.. +-|..-+ +|+..+ .+-++.+.++|+..+++
T Consensus 35 ~~~~~~~A~a~~~~Ga~~-i~~~~~~~i~~ir~~v-~~Pvig~~k~d~~~~~~~I~~~----~~~i~~~~~~Gad~V~l 107 (232)
T 3igs_A 35 PEIVAAMALAAEQAGAVA-VRIEGIDNLRMTRSLV-SVPIIGIIKRDLDESPVRITPF----LDDVDALAQAGAAIIAV 107 (232)
T ss_dssp HHHHHHHHHHHHHTTCSE-EEEESHHHHHHHHTTC-CSCEEEECBCCCSSCCCCBSCS----HHHHHHHHHHTCSEEEE
T ss_pred cchHHHHHHHHHHCCCeE-EEECCHHHHHHHHHhc-CCCEEEEEeecCCCcceEeCcc----HHHHHHHHHcCCCEEEE
Confidence 344478999999999885 4544444556666554 2333211 122222 23467778999997755
No 185
>2o55_A Putative glycerophosphodiester phosphodiesterase; beta barrel, structural genomics, protein structure initiati 2; 2.81A {Galdieria sulphuraria}
Probab=29.75 E-value=94 Score=24.50 Aligned_cols=69 Identities=13% Similarity=0.074 Sum_probs=42.4
Q ss_pred HHHHHHHHHhccCc--eeeeccCccccHHHHHhhCCCCceEEEEE-e----------------------ecCHHHHHHHH
Q psy13219 38 GEVATARAAGMMDA--IMILSLMSTTSLEEVRAQNPSTTLWLQMY-I----------------------FKDRALSLQMV 92 (193)
Q Consensus 38 gE~~~araA~~~g~--~~~lst~ss~s~eei~~~~~~~~~wfQlY-~----------------------~~dr~~~~~ll 92 (193)
-+..+++.-.+.|. ..++||+....++.+.+..|.-+.. +++ - +.-...+.+++
T Consensus 127 ~~~~v~~~l~~~~~~~~v~i~Sf~~~~l~~~~~~~p~~~~~-~l~~~~~~~~~~~~~~~~~~~~~~~v~~~~~~~~~~~v 205 (258)
T 2o55_A 127 DHQRLLLLVEKYHMQERVDYCSFHHEALAHLKALCPDVKIT-YLFNYMGQPTPLDFVEQACYGDANGVSMLFHYLTKEQV 205 (258)
T ss_dssp HHHHHHHHHHTTTCGGGEEEEESSHHHHHHHHHHCTTCEEE-EECCTTSCCCCTTHHHHHHHTTCSEEEEEGGGCCHHHH
T ss_pred HHHHHHHHHHHcCCCCCEEEEeCCHHHHHHHHHHCCCCcEE-EEEeCCCCCCHHHHHHHHHhcCCeEEecChhhcCHHHH
Confidence 44556666666654 3677888877888887766543222 222 0 00112235778
Q ss_pred HHHHHcCCcEEEEee
Q psy13219 93 QRAERSGYSAIVITM 107 (193)
Q Consensus 93 ~RAe~AG~~AlvvTV 107 (193)
++++++|.+..+.||
T Consensus 206 ~~~~~~G~~v~~wTv 220 (258)
T 2o55_A 206 CTAHEKGLSVTVWMP 220 (258)
T ss_dssp HHHHHTTCEEEEECC
T ss_pred HHHHHCCCEEEEeeC
Confidence 888888888888888
No 186
>2cy2_A TTHA1209, probable acetyltransferase; structural genomics, unknown function, NPPSFA; HET: ACO; 2.00A {Thermus thermophilus} SCOP: d.108.1.1 PDB: 1wk4_A*
Probab=29.64 E-value=46 Score=22.81 Aligned_cols=49 Identities=16% Similarity=0.077 Sum_probs=31.4
Q ss_pred eEE-EEEeecC-------HHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCC
Q psy13219 75 LWL-QMYIFKD-------RALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKF 123 (193)
Q Consensus 75 ~wf-QlY~~~d-------r~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~ 123 (193)
.++ .+|+..+ ..+...+++.|++.|++.+.++|+..-...+.-=.|.||
T Consensus 89 ~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf 145 (174)
T 2cy2_A 89 AELWAIYVLPTWQRKGLGRALFHEGARLLQAEGYGRMLVWVLKENPKGRGFYEHLGG 145 (174)
T ss_dssp EEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTC
T ss_pred eEEEEEEECHHHhCcCHHHHHHHHHHHHHHhCCCceEEEEEECCChhHHHHHHHcCC
Confidence 344 6777553 256667777788889999999988653222322345566
No 187
>1jfl_A Aspartate racemase; alpha-beta structure, HOMO-dimer, homologous domains, isomer; 1.90A {Pyrococcus horikoshii} SCOP: c.78.2.1 c.78.2.1 PDB: 2dx7_A* 1iu9_A
Probab=29.54 E-value=31 Score=26.97 Aligned_cols=40 Identities=20% Similarity=0.284 Sum_probs=30.6
Q ss_pred HHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCCCCC
Q psy13219 86 ALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFTMPP 127 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~~p~ 127 (193)
..+.+.+++.+++|+++|++...+...+ ...+|..+.+|.
T Consensus 61 ~~l~~~~~~l~~~g~d~iviaCnTa~~~--~~~l~~~~~iPv 100 (228)
T 1jfl_A 61 PQLIWTAKRLEECGADFIIMPCNTAHAF--VEDIRKAIKIPI 100 (228)
T ss_dssp HHHHHHHHHHHHHTCSEEECSCTGGGGG--HHHHHHHCSSCB
T ss_pred HHHHHHHHHHHHcCCCEEEEcCccHHHH--HHHHHHhCCCCE
Confidence 3455788888999999999999988643 556777677763
No 188
>3fyn_A Integron gene cassette protein HFX_CASS3; integron cassette protein, mobIle metagenome, structural genomics, PSI-2; 1.45A {Uncultured bacterium}
Probab=29.47 E-value=44 Score=23.54 Aligned_cols=40 Identities=15% Similarity=0.046 Sum_probs=24.1
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCC
Q psy13219 85 RALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFT 124 (193)
Q Consensus 85 r~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~ 124 (193)
+.++..+++.|++.|++.+.++++..-...+.-=.|.||.
T Consensus 119 ~~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF~ 158 (176)
T 3fyn_A 119 AAALQTVKQGCCDLGVRALLVETGPEDHPARGVYSRAGFE 158 (176)
T ss_dssp HHHHHHHHHHHHHTTCCCEECCCC--------HHHHTTCC
T ss_pred HHHHHHHHHHHHHCCCCEEEEEecCCCHHHHHHHHHCCCe
Confidence 3566777888888999999999886543333333456664
No 189
>3qvl_A Putative hydantoin racemase; isomerase; HET: 5HY; 1.82A {Klebsiella pneumoniae subsp} PDB: 3qvk_A* 3qvj_A
Probab=29.42 E-value=39 Score=27.12 Aligned_cols=35 Identities=17% Similarity=0.169 Sum_probs=25.5
Q ss_pred HHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCCCC
Q psy13219 89 LQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFTMP 126 (193)
Q Consensus 89 ~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~~p 126 (193)
.+.++++++.||+++++.+.+.. +. .++|..+.+|
T Consensus 59 ~~~~~~l~~~g~d~iviaCnt~~-~l--~~lr~~~~iP 93 (245)
T 3qvl_A 59 LEQIRAGREQGVDGHVIASFGDP-GL--LAARELAQGP 93 (245)
T ss_dssp HHHHHHHHHHTCSEEEEC-CCCT-TH--HHHHHHCSSC
T ss_pred HHHHHHHHHCCCCEEEEeCCChh-HH--HHHHHHcCCC
Confidence 35556778889999999998864 44 5677777776
No 190
>1z41_A YQJM, probable NADH-dependent flavin oxidoreductase YQJ; FMN, beta-alpha-barrel; HET: FMN; 1.30A {Bacillus subtilis} SCOP: c.1.4.1 PDB: 1z42_A* 1z44_A* 1z48_A*
Probab=29.19 E-value=2.4e+02 Score=23.25 Aligned_cols=43 Identities=16% Similarity=0.168 Sum_probs=29.1
Q ss_pred HHHHhhCCCCceEEEEEee------cCHHHHHHHHHHHHHcCCcEEEEee
Q psy13219 64 EEVRAQNPSTTLWLQMYIF------KDRALSLQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 64 eei~~~~~~~~~wfQlY~~------~dr~~~~~ll~RAe~AG~~AlvvTV 107 (193)
+.|.++. +-+.++-|-.. .+.+...+++++++++|+..|-|+-
T Consensus 202 ~avr~~v-~~pv~vris~~~~~~~g~~~~~~~~~a~~l~~~Gvd~i~v~~ 250 (338)
T 1z41_A 202 DEVKQVW-DGPLFVRVSASDYTDKGLDIADHIGFAKWMKEQGVDLIDCSS 250 (338)
T ss_dssp HHHHHHC-CSCEEEEEECCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHc-CCcEEEEecCcccCCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 3444544 44556655442 2466778899999999999988853
No 191
>1tk9_A Phosphoheptose isomerase 1; lipopolysaccharide biosynthesis, structural genomics, NYSGXRC, LPC1_camje, PSI, protein structure initiative; 2.10A {Campylobacter jejuni} SCOP: c.80.1.3
Probab=29.10 E-value=1.1e+02 Score=22.36 Aligned_cols=36 Identities=6% Similarity=0.076 Sum_probs=27.2
Q ss_pred CceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEeec
Q psy13219 73 TTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMD 108 (193)
Q Consensus 73 ~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD 108 (193)
+...+=+-..+.-..+.+.++.|++.|++.+.+|-.
T Consensus 111 ~Dvvi~iS~sG~t~~~~~~~~~ak~~g~~vi~iT~~ 146 (188)
T 1tk9_A 111 KDVLIGISTSGKSPNVLEALKKAKELNMLCLGLSGK 146 (188)
T ss_dssp TCEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEEEG
T ss_pred CCEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEeCC
Confidence 344444555565667788999999999999999975
No 192
>1vzw_A Phosphoribosyl isomerase A; histidine biosynthesis, tryptophan biosynthesis; 1.8A {Streptomyces coelicolor} SCOP: c.1.2.1 PDB: 2vep_A 2x30_A
Probab=28.84 E-value=1.2e+02 Score=23.48 Aligned_cols=22 Identities=23% Similarity=0.460 Sum_probs=18.6
Q ss_pred CCCHHHHHHHHhcCCCCEEEec
Q psy13219 170 SVDWDDVRSLVQATKLPIVCKG 191 (193)
Q Consensus 170 ~~tW~di~wlr~~~~lPivlKG 191 (193)
.++|+-++.+++..+.|++.=|
T Consensus 176 g~~~~~~~~i~~~~~ipvia~G 197 (244)
T 1vzw_A 176 GPNLELLKNVCAATDRPVVASG 197 (244)
T ss_dssp CCCHHHHHHHHHTCSSCEEEES
T ss_pred CCCHHHHHHHHHhcCCCEEEEC
Confidence 4689999999999999998754
No 193
>4fnq_A Alpha-galactosidase AGAB; glycoside hydrolase, hydrolase; 1.80A {Geobacillus stearothermophilus} PDB: 4fnr_A 4fnu_A* 4fnt_A* 4fns_A* 4fnp_A*
Probab=28.80 E-value=18 Score=33.97 Aligned_cols=42 Identities=19% Similarity=0.336 Sum_probs=33.3
Q ss_pred EEEEEeecCHHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhh
Q psy13219 76 WLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDL 119 (193)
Q Consensus 76 wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~ 119 (193)
|.-.|..-|.+.+.+++++|+++||+-++| |--..|.|..|.
T Consensus 336 W~a~~~d~~e~~i~~~ad~aa~lG~e~fvi--DDGWf~~r~~d~ 377 (729)
T 4fnq_A 336 WEATYFDFNEEKLVNIAKTEAELGIELFVL--DDGWFGKRDDDR 377 (729)
T ss_dssp STTTTTCCCHHHHHHHHHHHHHHTCCEEEE--CSCCBTTCCSTT
T ss_pred cccccccCCHHHHHHHHHHHHhcCccEEEE--cceeecCCCCCc
Confidence 555677779999999999999999997665 666777776553
No 194
>4e0a_A BH1408 protein; structural genomics, PSI-biology, protein structure initiati northeast structural genomics consortium, NESG, transferase; 1.80A {Bacillus halodurans} PDB: 4f6a_A*
Probab=28.73 E-value=48 Score=22.54 Aligned_cols=26 Identities=12% Similarity=0.100 Sum_probs=20.9
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 85 RALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 85 r~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
+.++..+++.|++.|++.+.++|+..
T Consensus 107 ~~ll~~~~~~~~~~g~~~i~l~~~~~ 132 (164)
T 4e0a_A 107 RLIFEAIISYGKAHQVDAIELDVYDF 132 (164)
T ss_dssp HHHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred HHHHHHHHHHHHHcCCCEEEEEEEcC
Confidence 35667777888889999999998764
No 195
>2h1y_A Malonyl coenzyme A-acyl carrier protein transacyl; FABD, MCAT, transferase; 2.50A {Helicobacter pylori}
Probab=28.40 E-value=97 Score=25.73 Aligned_cols=37 Identities=11% Similarity=0.057 Sum_probs=31.2
Q ss_pred EEEeecCHHHHHHHHHHHHHcCC-cEEEEeeccCCCCC
Q psy13219 78 QMYIFKDRALSLQMVQRAERSGY-SAIVITMDTAVLGS 114 (193)
Q Consensus 78 QlY~~~dr~~~~~ll~RAe~AG~-~AlvvTVD~pv~G~ 114 (193)
|+-+..+.+.++++.++.++.|+ ++..+.|+.+....
T Consensus 175 ~~VisG~~~al~~~~~~l~~~g~~~~~~L~v~~afHS~ 212 (321)
T 2h1y_A 175 QVVLAGVKDDLKALEPTLKEMGAKRVVFLEMSVASHCP 212 (321)
T ss_dssp EEEEEEEHHHHTTSHHHHHHHTCSEEEECSSSCCCSSG
T ss_pred cEEEEeCHHHHHHHHHHHHhcCCceEEECCCCCccccH
Confidence 66788899999999999999999 79888888776543
No 196
>2fiq_A Putative tagatose 6-phosphate kinase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics; 2.25A {Escherichia coli} SCOP: c.1.10.7
Probab=28.32 E-value=2.4e+02 Score=24.66 Aligned_cols=76 Identities=17% Similarity=0.103 Sum_probs=48.4
Q ss_pred cCCchHHHHHHHHHhccCceeeeccCcc--------cc--HHHHHhh---------CCCCceEEEEEeecCH--------
Q psy13219 33 LAHADGEVATARAAGMMDAIMILSLMST--------TS--LEEVRAQ---------NPSTTLWLQMYIFKDR-------- 85 (193)
Q Consensus 33 l~~~~gE~~~araA~~~g~~~~lst~ss--------~s--~eei~~~---------~~~~~~wfQlY~~~dr-------- 85 (193)
..|++-=.++.+||.+.+.|.++....+ +. ++++... .|..+..+.+=-..+-
T Consensus 21 ~~n~e~i~Ail~aAee~~sPVIi~~s~~~v~~~gGY~g~~~~~~~~~v~~~A~~~~vP~~~VaLHlDHg~~~~w~~~~~~ 100 (420)
T 2fiq_A 21 SAHPLVIEAALAFDRNSTRKVLIEATSNQVNQFGGYTGMTPADFREFVFAIADKVGFARERIILGGDHLGPNCWQQENVD 100 (420)
T ss_dssp CCCHHHHHHHHHHTTTSCCCEEEEEETTTBSTTCTTTTBCHHHHHHHHHHHHHHHTCCGGGEEEEEEEESSGGGTTSBHH
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEEcChhhhhhccCCCCCCHHHHHHHHHHHHHHcCcCcceEEEECCCCCCccccccchh
Confidence 3566766899999999999999853221 12 4544321 1211255555333333
Q ss_pred ---HHHHHHHHHHHHcCCcEEEEeec
Q psy13219 86 ---ALSLQMVQRAERSGYSAIVITMD 108 (193)
Q Consensus 86 ---~~~~~ll~RAe~AG~~AlvvTVD 108 (193)
+..++++++|-++||+-|++.--
T Consensus 101 ~am~~a~e~i~~aI~aGFtSVMiD~S 126 (420)
T 2fiq_A 101 AAMEKSVELVKAYVRAGFSKIHLDAS 126 (420)
T ss_dssp HHHHHHHHHHHHHHHTTCCEEEECCC
T ss_pred hhhhhHHHHHHHHHHhCCCEEEECCC
Confidence 34458999999999999877644
No 197
>1vm6_A DHPR, dihydrodipicolinate reductase; TM1520, structural genomics, protein structure initiative, PSI, joint center for structu genomics; HET: NAD PG4; 2.27A {Thermotoga maritima} SCOP: c.2.1.3 d.81.1.3
Probab=28.31 E-value=84 Score=25.29 Aligned_cols=71 Identities=7% Similarity=0.118 Sum_probs=43.5
Q ss_pred ccCCchHHHHHHHHHhccCceeeeccCc--cccHHHHHhhCCCCceEEEEEeec-C--HHHHHHHHHHHHHc--CCcEEE
Q psy13219 32 KLAHADGEVATARAAGMMDAIMILSLMS--TTSLEEVRAQNPSTTLWLQMYIFK-D--RALSLQMVQRAERS--GYSAIV 104 (193)
Q Consensus 32 ~l~~~~gE~~~araA~~~g~~~~lst~s--s~s~eei~~~~~~~~~wfQlY~~~-d--r~~~~~ll~RAe~A--G~~Alv 104 (193)
-+.+|+.=...++.|.+.|++++++|.+ ..-++++.+.... ...+ |-++ . -.+..++++.|.+. +|..=+
T Consensus 59 DFT~P~a~~~~~~~~~~~g~~~ViGTTG~~~~~~~~l~~~a~~-~~vv--~apNfSlGvnll~~l~~~aA~~l~~ydiEI 135 (228)
T 1vm6_A 59 DFSSPEALPKTVDLCKKYRAGLVLGTTALKEEHLQMLRELSKE-VPVV--QAYNFSIGINVLKRFLSELVKVLEDWDVEI 135 (228)
T ss_dssp ECSCGGGHHHHHHHHHHHTCEEEECCCSCCHHHHHHHHHHTTT-SEEE--ECSCCCHHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred ECCCHHHHHHHHHHHHHcCCCEEEeCCCCCHHHHHHHHHHHhh-CCEE--EeccccHHHHHHHHHHHHHHHhcCCCCEEE
Confidence 5678888899999999999999999854 3334556555433 2222 2221 2 23445666666553 454444
Q ss_pred E
Q psy13219 105 I 105 (193)
Q Consensus 105 v 105 (193)
+
T Consensus 136 i 136 (228)
T 1vm6_A 136 V 136 (228)
T ss_dssp E
T ss_pred E
Confidence 4
No 198
>3d8p_A Acetyltransferase of GNAT family; NP_373092.1, structural GE joint center for structural genomics, JCSG, protein structu initiative; 2.20A {Staphylococcus aureus subsp}
Probab=28.23 E-value=52 Score=22.41 Aligned_cols=47 Identities=15% Similarity=0.214 Sum_probs=28.6
Q ss_pred EEEEeecC---H----HHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCC
Q psy13219 77 LQMYIFKD---R----ALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKF 123 (193)
Q Consensus 77 fQlY~~~d---r----~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~ 123 (193)
.-+|+..+ + .+...+++.|++.|++.|.++++..-...+.-=.|.||
T Consensus 82 ~~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~~n~~a~~~y~k~GF 135 (163)
T 3d8p_A 82 KKMFVDKGYRNLKIGKKLLDKVIMTCKEQNIDGIYLGTIDKFISAQYFYSNNGF 135 (163)
T ss_dssp EEEEECGGGTTTTHHHHHHHHHHHHHHHTTCCEEEEEECTTCHHHHHHHHHTTC
T ss_pred EEEEEChhhccCCHHHHHHHHHHHHHHHCCCeEEEEEecCCCHHHHHHHHHCCC
Confidence 45566443 3 35556667777889999999988643222322345566
No 199
>2z6i_A Trans-2-enoyl-ACP reductase II; fatty acid synthesis, antibiotics, oxidoreductase, flavoprotein; HET: FMN; 1.70A {Streptococcus pneumoniae} PDB: 2z6j_A*
Probab=28.12 E-value=2.5e+02 Score=23.04 Aligned_cols=21 Identities=24% Similarity=0.483 Sum_probs=14.1
Q ss_pred CCHHHHHHHHhcCCCCEEEec
Q psy13219 171 VDWDDVRSLVQATKLPIVCKG 191 (193)
Q Consensus 171 ~tW~di~wlr~~~~lPivlKG 191 (193)
.+|+-++.+++..+.||++=|
T Consensus 149 ~~~~ll~~i~~~~~iPViaaG 169 (332)
T 2z6i_A 149 TTMTLVRQVATAISIPVIAAG 169 (332)
T ss_dssp CHHHHHHHHHHHCSSCEEEES
T ss_pred cHHHHHHHHHHhcCCCEEEEC
Confidence 466677777777777776643
No 200
>2dxq_A AGR_C_4057P, acetyltransferase; structural genomics, PSI-2, protein struc initiative, midwest center for structural genomics, MCSG; 1.80A {Agrobacterium tumefaciens str}
Probab=28.09 E-value=52 Score=22.80 Aligned_cols=25 Identities=4% Similarity=0.072 Sum_probs=19.6
Q ss_pred HHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 86 ALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
.+++.+++.|++.|++.|.++|...
T Consensus 101 ~Ll~~~~~~a~~~g~~~i~l~v~~~ 125 (150)
T 2dxq_A 101 TVVRHAIETAFGANCYKVMLLTGRH 125 (150)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEECCC
T ss_pred HHHHHHHHHHHHCCCCEEEEEeCCC
Confidence 4566677778889999999998753
No 201
>2dqw_A Dihydropteroate synthase; dimer, structural genomics; 1.65A {Thermus thermophilus} PDB: 2dza_A* 2dzb_A*
Probab=27.93 E-value=66 Score=26.83 Aligned_cols=21 Identities=24% Similarity=0.320 Sum_probs=16.9
Q ss_pred HHHHHHHHHHHHcCCcEEEEe
Q psy13219 86 ALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~AlvvT 106 (193)
+..++.+++|+++|++-|++.
T Consensus 177 ~~l~~~i~~a~~~Gi~~IilD 197 (294)
T 2dqw_A 177 AFLEAQARRALSAGVPQVVLD 197 (294)
T ss_dssp HHHHHHHHHHHHTTCSCEEEE
T ss_pred HHHHHHHHHHHHCCCCcEEEc
Confidence 456778899999999977666
No 202
>2j8m_A Acetyltransferase PA4866 from P. aeruginosa; GCN5 family, phosphinothricin, methionine sulfone, methionine sulfoximine; 1.44A {Pseudomonas aeruginosa} PDB: 2bl1_A 2j8n_A 2j8r_A* 1yvo_A
Probab=27.80 E-value=50 Score=23.34 Aligned_cols=34 Identities=21% Similarity=0.440 Sum_probs=25.5
Q ss_pred EEEEeecC-------HHHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 77 LQMYIFKD-------RALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 77 fQlY~~~d-------r~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
.-+|+..+ ++++..+++.|++.|++.|.+.|...
T Consensus 86 ~~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~ 126 (172)
T 2j8m_A 86 HSVYVRDDQRGKGLGVQLLQALIERARAQGLHVMVAAIESG 126 (172)
T ss_dssp EEEEECTTCTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred EEEEEChhhcCCCHHHHHHHHHHHHHHHCCccEEEEEEcCC
Confidence 35777553 35677778888889999999998754
No 203
>2z0r_A Putative uncharacterized protein TTHA0547; alpha/beta protein, structural genomics, unknown function; 2.30A {Thermus thermophilus}
Probab=27.48 E-value=94 Score=21.97 Aligned_cols=44 Identities=18% Similarity=0.255 Sum_probs=35.6
Q ss_pred HHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEeecc
Q psy13219 64 EEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDT 109 (193)
Q Consensus 64 eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD~ 109 (193)
+...+..|. .-+|++.-.|+..-+.+++-....|+.+++|..+.
T Consensus 40 ~~f~~~~p~--~Gm~V~~l~~w~lKE~~l~Al~~lgv~~~lvDy~P 83 (103)
T 2z0r_A 40 EAFLAHHPH--LGMRVSALESRALKEAYLRALGMLQVEAVMVDYRP 83 (103)
T ss_dssp HHHHHTSCS--SCCEEEEECSHHHHHHHHHHHHHTTCCEEEESCCS
T ss_pred HHHHhhCCc--cccEEeecchhHHHHHHHHHHHHcCCcEEEEecCC
Confidence 344444553 34899999999999999999999999999998774
No 204
>1gvf_A Tagatose-bisphosphate aldolase AGAY; lyase, zinc.; HET: PGH; 1.45A {Escherichia coli} SCOP: c.1.10.2
Probab=27.28 E-value=52 Score=27.36 Aligned_cols=62 Identities=21% Similarity=0.190 Sum_probs=0.0
Q ss_pred HHHHHHHhccCceeeeccCcccc-----------HHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 40 VATARAAGMMDAIMILSLMSTTS-----------LEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 40 ~~~araA~~~g~~~~lst~ss~s-----------~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
.++.+||.+.+.|.+|...-..- +...++..+ .|..+.| |.....+.+++|-++||+-++++
T Consensus 32 ~avl~AAe~~~sPvIlq~s~~~~~y~g~~~~~~~v~~~a~~~~-VPValHl----DHg~~~e~i~~ai~~GFtSVMiD 104 (286)
T 1gvf_A 32 QAILEVCSEMRSPVILAGTPGTFKHIALEEIYALCSAYSTTYN-MPLALHL----DHHESLDDIRRKVHAGVRSAMID 104 (286)
T ss_dssp HHHHHHHHHHTCCCEEEECTTHHHHSCHHHHHHHHHHHHHHTT-SCBEEEE----EEECCHHHHHHHHHTTCCEEEEC
T ss_pred HHHHHHHHHhCCCEEEECChhHHhhcCHHHHHHHHHHHHHhCC-CcEEEEc----CCCCCHHHHHHHHHcCCCeEEEC
No 205
>2y5s_A DHPS, dihydropteroate synthase; transferase, folate biosynthesis; HET: 78H; 1.95A {Burkholderia cenocepacia} PDB: 2y5j_A*
Probab=27.17 E-value=87 Score=26.04 Aligned_cols=22 Identities=18% Similarity=0.252 Sum_probs=18.0
Q ss_pred HHHHHHHHHHHHHcCCc--EEEEe
Q psy13219 85 RALSLQMVQRAERSGYS--AIVIT 106 (193)
Q Consensus 85 r~~~~~ll~RAe~AG~~--AlvvT 106 (193)
.+..++.+++|+++|++ -|++.
T Consensus 170 ~~~l~~~i~~a~~~Gi~~~~IilD 193 (294)
T 2y5s_A 170 RDFLAARAQALRDAGVAAERICVD 193 (294)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHHHHHHHHHHcCCChhhEEEe
Confidence 45667888999999998 78887
No 206
>2isw_A Putative fructose-1,6-bisphosphate aldolase; class II fructose-1,6-bisphosphate aldolase, glycolytic pathway, giardia lamblia, drug target; HET: PGH; 1.75A {Giardia intestinalis} PDB: 2isv_A* 3ohi_A* 3gay_A* 3gak_A* 3gb6_A*
Probab=27.15 E-value=55 Score=27.81 Aligned_cols=24 Identities=25% Similarity=0.573 Sum_probs=19.9
Q ss_pred CCC--CCHHHHHHHHhcCCCCEEEec
Q psy13219 168 DDS--VDWDDVRSLVQATKLPIVCKG 191 (193)
Q Consensus 168 ~~~--~tW~di~wlr~~~~lPivlKG 191 (193)
.|. +++|-|+.|++..+.|||+=|
T Consensus 186 ~p~~~L~~~~L~~I~~~~~vpLVlHG 211 (323)
T 2isw_A 186 ESDIRLAIDRVKTISDLTGIPLVMHG 211 (323)
T ss_dssp ----CCCCHHHHHHHHHHCSCEEECS
T ss_pred CcccccCHHHHHHHHHHhCCCeEEEC
Confidence 366 999999999999999999977
No 207
>2r1i_A GCN5-related N-acetyltransferase; YP_831484.1, putative acetyltransferase, arthrobacter SP. FB acetyltransferase (GNAT) family; HET: MSE; 1.65A {Arthrobacter SP}
Probab=26.99 E-value=55 Score=22.60 Aligned_cols=24 Identities=17% Similarity=0.129 Sum_probs=18.4
Q ss_pred HHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 87 LSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 87 ~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
+...+++.|++.|++.|.++++..
T Consensus 118 ll~~~~~~a~~~g~~~i~~~~~~~ 141 (172)
T 2r1i_A 118 LLAASCGLVRSRGGALLEINVDGE 141 (172)
T ss_dssp HHHHHHHHHHHTTCCEEEEEEETT
T ss_pred HHHHHHHHHHHCCCCEEEEEEcCC
Confidence 455666777788999999998864
No 208
>3td9_A Branched chain amino acid ABC transporter, peripl amino acid-binding protein; leucine binding, structural genomics; HET: MSE PHE; 1.90A {Thermotoga maritima}
Probab=26.96 E-value=92 Score=25.06 Aligned_cols=61 Identities=15% Similarity=0.092 Sum_probs=30.1
Q ss_pred HHHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHH-cCCcEEEEe
Q psy13219 39 EVATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAER-SGYSAIVIT 106 (193)
Q Consensus 39 E~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~-AG~~AlvvT 106 (193)
-.+++..+.+.++|++..+.++..+.+ ..+..|++.. .|......+++.+.+ .|.+-+.+-
T Consensus 94 ~~~~~~~~~~~~iP~i~~~~~~~~~~~------~~~~~f~~~~-~~~~~~~~~~~~l~~~~g~~~iaii 155 (366)
T 3td9_A 94 SLAIAPIAEENKVPMVTPASTNPLVTQ------GRKFVSRVCF-IDPFQGAAMAVFAYKNLGAKRVVVF 155 (366)
T ss_dssp HHHHHHHHHHTTCCEEESSCCCGGGTT------TCSSEEESSC-CHHHHHHHHHHHHHHTSCCCEEEEE
T ss_pred HHHHHHHHHhCCCeEEecCCCCccccC------CCCCEEEEeC-CcHHHHHHHHHHHHHhcCCcEEEEE
Confidence 345666777778887765443322211 1234454432 334444455555533 366555443
No 209
>3h6g_A Glutamate receptor, ionotropic kainate 2; membrane protein glycoprotein, cell junction, cell membrane, glycoprotein, ION transport; HET: NAG TLA; 2.70A {Rattus norvegicus} PDB: 3h6h_A* 3qlv_C 3qlu_C* 3qlt_A* 3olz_A*
Probab=26.77 E-value=1.6e+02 Score=23.95 Aligned_cols=64 Identities=9% Similarity=0.153 Sum_probs=41.7
Q ss_pred HHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 40 VATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 40 ~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
.+++.-+.+.++|++..+.++..+. .....+|++. +.|......+++-++..|.+-+.+-.|..
T Consensus 85 ~a~~~~~~~~~ip~is~~~~~~~l~------~~~~~~~r~~-~~~~~~~~~~~~~~~~~g~~~v~ii~d~~ 148 (395)
T 3h6g_A 85 NAVQSICNALGVPHIQTRWKHQVSD------NKDSFYVSLY-PDFSSLSRAILDLVQFFKWKTVTVVYDDS 148 (395)
T ss_dssp HHHHHHHHHTTCCEEECSCCCCCTT------CCCCSEEEEE-ECHHHHHHHHHHHHHHTTCSEEEEEESST
T ss_pred HHHHHHHhcCCCCeEeeccCccccc------ccCceEEEec-CCHHHHHHHHHHHHHHCCCeEEEEEEECh
Confidence 4677778888888876444333332 1234578875 55666677777777888988777766653
No 210
>3dr6_A YNCA; acetyltransferase, csgid target, essential gene, IDP00086, structural genomics, center for STRU genomics of infectious diseases; HET: MSE; 1.75A {Salmonella typhimurium} SCOP: d.108.1.1 PDB: 3dr8_A*
Probab=26.76 E-value=55 Score=22.37 Aligned_cols=47 Identities=19% Similarity=0.282 Sum_probs=30.5
Q ss_pred EEEEeecC-------HHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCC
Q psy13219 77 LQMYIFKD-------RALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKF 123 (193)
Q Consensus 77 fQlY~~~d-------r~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~ 123 (193)
..+++..+ +.+...+++.|++.|++.+.++++..-...+.-=.+.||
T Consensus 86 ~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~n~~a~~~y~k~Gf 139 (174)
T 3dr6_A 86 HSVYVHPAHQGKGLGRKLLSRLIDEARRCGKHVMVAGIESQNAASIRLHHSLGF 139 (174)
T ss_dssp EEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEEETTCHHHHHHHHHTTC
T ss_pred EEEEECHHHccCCHHHHHHHHHHHHHHHcCCCEEEEEeecCCHHHHHHHHhCCC
Confidence 34666543 356677788888889999999998653322322345565
No 211
>1x92_A APC5045, phosphoheptose isomerase; midwest centre for structural genomics, SIS domain, A/B protein, lipopolysaccharide biosynthesis, PSI; HET: M7P; 2.30A {Pseudomonas aeruginosa} SCOP: c.80.1.3 PDB: 3bjz_A
Probab=26.68 E-value=1.2e+02 Score=22.57 Aligned_cols=35 Identities=17% Similarity=0.149 Sum_probs=26.7
Q ss_pred ceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEeec
Q psy13219 74 TLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMD 108 (193)
Q Consensus 74 ~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD 108 (193)
...+=+-..+.-..+.+.++.|++.|++.|.||-.
T Consensus 115 DvvI~iS~SG~t~~~i~~~~~ak~~g~~vI~IT~~ 149 (199)
T 1x92_A 115 DVLLAISTSGNSANVIQAIQAAHDREMLVVALTGR 149 (199)
T ss_dssp CEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECT
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHCCCEEEEEECC
Confidence 34444555666667778999999999999999864
No 212
>3i3g_A N-acetyltransferase; malaria, structural genomics, structural genomics consortium, SGC,; 1.86A {Trypanosoma brucei} PDB: 3fb3_A
Probab=26.62 E-value=79 Score=21.62 Aligned_cols=33 Identities=9% Similarity=0.262 Sum_probs=24.3
Q ss_pred EEEeecC-------HHHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 78 QMYIFKD-------RALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 78 QlY~~~d-------r~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
.+|+..+ +.+...+++.|++.|++.+.++++..
T Consensus 101 ~~~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~~~~~ 140 (161)
T 3i3g_A 101 DVVVDPSYRGAGLGKALIMDLCEISRSKGCYKVILDSSEK 140 (161)
T ss_dssp EEEECGGGTTTTHHHHHHHHHHHHHHHTTCSEEEEEECTT
T ss_pred EEEEcHHHcccCHHHHHHHHHHHHHHHcCCcEEEEEeccc
Confidence 4566543 35667777788888999999999754
No 213
>1vyr_A Pentaerythritol tetranitrate reductase; oxidoreductase, flavoenzyme, explosive degradation, steroid binding; HET: FMN TNF; 0.9A {Enterobacter cloacae} SCOP: c.1.4.1 PDB: 1gvq_A* 1gvr_A* 1gvs_A* 1h50_A* 1h51_A* 1h60_A* 1h61_A* 1h62_A* 1h63_A* 1gvo_A* 2aba_A* 3f03_K* 3kft_A* 3p7y_A* 3p80_A* 3p81_A* 3p62_A* 3p8i_A* 2abb_A* 3p67_A* ...
Probab=26.42 E-value=2.9e+02 Score=23.21 Aligned_cols=44 Identities=9% Similarity=0.219 Sum_probs=27.1
Q ss_pred HHHHHhhCCCCceEEEEEeec----------CHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 63 LEEVRAQNPSTTLWLQMYIFK----------DRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 63 ~eei~~~~~~~~~wfQlY~~~----------dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
++.|.++.+..+.++=|-... +.+...+++++++++|+..|-+.
T Consensus 218 v~avr~~vg~~~v~vrls~~~~~~~~~~~~~~~~~~~~~a~~l~~~G~d~i~v~ 271 (364)
T 1vyr_A 218 VDAVCNEWSADRIGIRVSPIGTFQNVDNGPNEEADALYLIEELAKRGIAYLHMS 271 (364)
T ss_dssp HHHHHHHSCGGGEEEEECCSSCBTTBCCCTTHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred HHHHHHhcCCCcEEEEEccccccccccCCCCCHHHHHHHHHHHHHhCCCEEEEe
Confidence 556666665225555333321 23456678899999998887765
No 214
>1yy3_A S-adenosylmethionine:tRNA ribosyltransferase- isomerase; beta-barrel, QUEA, quein queuosine, tRNA- modification; 2.88A {Bacillus subtilis}
Probab=26.09 E-value=81 Score=27.08 Aligned_cols=47 Identities=19% Similarity=0.228 Sum_probs=27.5
Q ss_pred eeccCccccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 54 ILSLMSTTSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 54 ~lst~ss~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
.++|+--...|+|.+..- -.-||++ .+.+.+.|.+|++.|-+.|.|.
T Consensus 211 G~GTF~PV~~e~i~~H~M-HsE~~~V-----~~~ta~~in~aka~G~RViAVG 257 (346)
T 1yy3_A 211 GLGTFRPVSADEVEEHNM-HAEFYQM-----SEETAAALNKVRENGGRIISVG 257 (346)
T ss_dssp GGGGGC-----------C-CCEEEEE-----CHHHHHHHHHHHHTTCCEEEEC
T ss_pred cCCCCCCccccccccCCc-ccEEEEE-----CHHHHHHHHHHHHcCCeEEEEe
Confidence 346666667788987753 3568877 4778899999999999977774
No 215
>1mk4_A Hypothetical protein YQJY; alpha-beta-alpha sandwich, structural genomics, PSI, protein structure initiative; 1.70A {Bacillus subtilis} SCOP: d.108.1.1
Probab=25.96 E-value=53 Score=22.33 Aligned_cols=46 Identities=13% Similarity=0.027 Sum_probs=27.7
Q ss_pred EEEeecC---HH----HHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCC
Q psy13219 78 QMYIFKD---RA----LSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKF 123 (193)
Q Consensus 78 QlY~~~d---r~----~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~ 123 (193)
.+|+..+ ++ +...+++.|++.|++.+.++++..-...+.-=.|.||
T Consensus 73 ~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf 125 (157)
T 1mk4_A 73 FSGVHPDFRKMQIGKQLYDVFIETVKQRGCTRVKCVTSPVNKVSIAYHTKLGF 125 (157)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHHHHHTTTCCEEEEEECTTCHHHHHHHHHTTC
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHHCCCcEEEEEEcCCCHHHHHHHHHcCC
Confidence 5677553 33 4455666777789999999988643222222235565
No 216
>1z69_A COG2141, coenzyme F420-dependent N(5),N(10)- methylenetetrahydromethanopterin reductase; (alpha, beta)8 barrel, oxidoreductase; HET: F42 1PG; 2.61A {Methanosarcina barkeri}
Probab=25.87 E-value=55 Score=26.70 Aligned_cols=24 Identities=17% Similarity=0.213 Sum_probs=20.6
Q ss_pred cCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 83 KDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 83 ~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
.+.+...++.+.||++||..+++.
T Consensus 11 ~~~~~~~~~A~~AE~~Gfd~~w~~ 34 (327)
T 1z69_A 11 DPALKIAYYAKLSEQQGFDHVWIT 34 (327)
T ss_dssp SCHHHHHHHHHHHHHTTCSEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEec
Confidence 356778899999999999999885
No 217
>3irs_A Uncharacterized protein BB4693; structural genomics, PSI-2, protein structure initiative, TI protein; HET: GOL; 1.76A {Bordetella bronchiseptica} PDB: 3k4w_A
Probab=25.79 E-value=2.5e+02 Score=22.30 Aligned_cols=68 Identities=9% Similarity=-0.021 Sum_probs=38.2
Q ss_pred HHHHHhccCceeeeccC---------ccccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEeecc
Q psy13219 42 TARAAGMMDAIMILSLM---------STTSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDT 109 (193)
Q Consensus 42 ~araA~~~g~~~~lst~---------ss~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD~ 109 (193)
+.+.+.+.||-..+-.. .+.-+.++++..|+....+=..-+.|.+...+.|+|+++.|+++|-+..+.
T Consensus 52 ~l~~md~~GV~~~V~~~~~~~~~~~~~N~~~~~~~~~~p~r~~~~~~v~p~~~~~a~~eL~~~~~~g~~Gi~~~~~~ 128 (291)
T 3irs_A 52 MFEEMAAAGIEQGVCVGRNSSVLGSVSNADVAAVAKAYPDKFHPVGSIEAATRKEAMAQMQEILDLGIRIVNLEPGV 128 (291)
T ss_dssp HHHHHHHTTCCEEEEECCEETTTEECCHHHHHHHHHHSTTTEEEEEECCCSSHHHHHHHHHHHHHTTCCCEEECGGG
T ss_pred HHHHHHHCCCCEEEEcCCCccccccccHHHHHHHHHHCCCcEEEEEecCccCHHHHHHHHHHHHhCCCeEEEEeCCC
Confidence 44555667775444221 233455566666643322222223454445566777889999999998553
No 218
>1zco_A 2-dehydro-3-deoxyphosphoheptonate aldolase; arabino-heptulosonate, synthase, shikimate, DAHP, DAH7P, DAH DAH7PS, lyase; HET: PEP; 2.25A {Pyrococcus furiosus}
Probab=25.75 E-value=89 Score=25.36 Aligned_cols=42 Identities=19% Similarity=0.149 Sum_probs=31.6
Q ss_pred chhccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhh
Q psy13219 27 PSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQ 69 (193)
Q Consensus 27 P~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~ 69 (193)
|.+..++ ..+|=..+.+.+.+.|++++.+-+...+++.+.+.
T Consensus 65 ~~~~~g~-~~egl~~l~~~~~~~Gl~~~te~~d~~~~~~l~~~ 106 (262)
T 1zco_A 65 PYSFQGY-GEKALRWMREAADEYGLVTVTEVMDTRHVELVAKY 106 (262)
T ss_dssp TTSCCCC-THHHHHHHHHHHHHHTCEEEEECCCGGGHHHHHHH
T ss_pred cccccCc-cHHHHHHHHHHHHHcCCcEEEeeCCHHhHHHHHhh
Confidence 3444444 25666788899999999999988888888877665
No 219
>1f07_A Coenzyme F420-dependent N5,N10- methylenetetrahydromethanopterin reductase; (beta, alpha)8 barrel; HET: MPO; 2.00A {Methanothermobacter thermautotrophicusorganism_taxid} SCOP: c.1.16.3
Probab=25.70 E-value=66 Score=26.19 Aligned_cols=24 Identities=25% Similarity=0.286 Sum_probs=20.8
Q ss_pred cCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 83 KDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 83 ~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
.+.+...++.++||++||..+++.
T Consensus 11 ~~~~~~~~~a~~AE~~Gfd~~w~~ 34 (321)
T 1f07_A 11 EPIEKIVKLVKLAEDVGFEYAWIT 34 (321)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEec
Confidence 456778899999999999999885
No 220
>3n0w_A ABC branched chain amino acid family transporter, periplasmic ligand binding protein...; receptor family ligand binding region; HET: MSE; 1.88A {Burkholderia xenovorans}
Probab=25.61 E-value=1.2e+02 Score=24.51 Aligned_cols=62 Identities=8% Similarity=0.107 Sum_probs=29.8
Q ss_pred HHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 40 VATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 40 ~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
.+++..+.+.++|++..+.++..+.+ . ...+..|++.. .+......+++.+.+.|.+-+.+-
T Consensus 87 ~a~~~~~~~~~ip~i~~~~~~~~~~~---~-~~~~~~f~~~~-~~~~~~~~~~~~l~~~g~~~vaii 148 (379)
T 3n0w_A 87 LAINNLVKDKKKLAFITAAAADQIGG---T-ECNGYGIGFLY-NFTSIVKTVVQAQLAKGYKTWFLM 148 (379)
T ss_dssp HHHHHHHHHHTCEEEECSCCCTTTTT---T-TCCSSEEECSC-CHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHcCceEEEcCCCchhhhc---c-cCCCcEEEEeC-ChHHHHHHHHHHHHHcCCcEEEEE
Confidence 45566667777777664332222211 0 11234555433 344444555555555566554443
No 221
>2l69_A Rossmann 2X3 fold protein; structural genomics, northeast structural genomics consortiu PSI-biology, protein structure initiative; NMR {Artificial gene}
Probab=25.56 E-value=1.4e+02 Score=20.93 Aligned_cols=47 Identities=17% Similarity=0.316 Sum_probs=35.0
Q ss_pred ccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 61 TSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 61 ~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
-|+||+....... .-+.+-.|.+-.+..++-.+..|+..|++-.|.-
T Consensus 40 dsieelvkkynat---ivvvvvddkewaekairfvkslgaqvliiiydqd 86 (134)
T 2l69_A 40 DSIEELVKKYNAT---IVVVVVDDKEWAEKAIRFVKSLGAQVLIIIYDQD 86 (134)
T ss_dssp HHHHHHTTCCCCE---EEEEECSSHHHHHHHHHHHHHHCCCCEEEEECSC
T ss_pred HHHHHHHHHhCCe---EEEEEEccHHHHHHHHHHHHhcCCeEEEEEEeCc
Confidence 3567776554322 3455678888889999999999999999998864
No 222
>1i4n_A Indole-3-glycerol phosphate synthase; thermostable TIM-barrel protein, salt bridges, electrostatic interactions, lyase; 2.50A {Thermotoga maritima} SCOP: c.1.2.4 PDB: 1j5t_A
Probab=25.52 E-value=1.5e+02 Score=23.88 Aligned_cols=77 Identities=12% Similarity=0.138 Sum_probs=46.8
Q ss_pred eCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhhCC-CCceEEEEEee-cCHHHHHHHHHHHH
Q psy13219 19 YRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQNP-STTLWLQMYIF-KDRALSLQMVQRAE 96 (193)
Q Consensus 19 ~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~~-~~~~wfQlY~~-~dr~~~~~ll~RAe 96 (193)
++.|++ ...+..+.-++.-|+++++-.+..+.+......++++.+... -| +..-+- .|. +-++||.
T Consensus 100 v~lPvL-----rKDfi~~~~qi~ea~~~GAD~ilLi~a~l~~~~l~~l~~~a~~lG---l~~lvEv~~~----eE~~~A~ 167 (251)
T 1i4n_A 100 TCRPIL-----AKDFYIDTVQVKLASSVGADAILIIARILTAEQIKEIYEAAEELG---MDSLVEVHSR----EDLEKVF 167 (251)
T ss_dssp CCSCEE-----EECCCCSTHHHHHHHHTTCSEEEEEGGGSCHHHHHHHHHHHHTTT---CEEEEEECSH----HHHHHHH
T ss_pred CCCCEE-----EeeCCCCHHHHHHHHHcCCCEEEEecccCCHHHHHHHHHHHHHcC---CeEEEEeCCH----HHHHHHH
Confidence 466776 333455555677788888888888888766666666654321 11 122221 222 3377888
Q ss_pred Hc-CCcEEEEee
Q psy13219 97 RS-GYSAIVITM 107 (193)
Q Consensus 97 ~A-G~~AlvvTV 107 (193)
++ |++-|.+|-
T Consensus 168 ~l~g~~iIGinn 179 (251)
T 1i4n_A 168 SVIRPKIIGINT 179 (251)
T ss_dssp TTCCCSEEEEEC
T ss_pred hcCCCCEEEEeC
Confidence 88 888777764
No 223
>3trj_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 2.80A {Francisella tularensis subsp}
Probab=25.51 E-value=1.2e+02 Score=22.95 Aligned_cols=35 Identities=20% Similarity=0.145 Sum_probs=26.9
Q ss_pred ceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEeec
Q psy13219 74 TLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMD 108 (193)
Q Consensus 74 ~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD 108 (193)
...+=+-..+.-..+.+.++.|++.|++.|.+|-.
T Consensus 116 Dvvi~iS~SG~t~~~~~~~~~ak~~g~~vi~iT~~ 150 (201)
T 3trj_A 116 DILLVITTSGDSENILSAVEEAHDLEMKVIALTGG 150 (201)
T ss_dssp CEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEEET
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHCCCcEEEEECC
Confidence 34444555666677888999999999999999964
No 224
>2pdo_A Acetyltransferase YPEA; alpha-beta-alpha sandwich, structural genomics, PSI-2, prote structure initiative; HET: MSE; 2.00A {Shigella flexneri 2A}
Probab=25.51 E-value=61 Score=22.18 Aligned_cols=34 Identities=15% Similarity=0.191 Sum_probs=24.2
Q ss_pred EEEEeecC-------HHHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 77 LQMYIFKD-------RALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 77 fQlY~~~d-------r~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
..+|+..+ +.++..+++.|++.|++.|.++|...
T Consensus 73 ~~l~V~p~~rg~GiG~~Ll~~~~~~~~~~g~~~i~l~v~~~ 113 (144)
T 2pdo_A 73 YYLGVHPEFRGRGIANALLNRLEKKLIARGCPKIQINVPED 113 (144)
T ss_dssp EEEEECGGGTTSCHHHHHHHHHHHHHHHTTCCEEEEEEESS
T ss_pred EEEEECccccCCcHHHHHHHHHHHHHHHcCCCEEEEEEeCC
Confidence 35777554 24566667777888999999988653
No 225
>2eq5_A 228AA long hypothetical hydantoin racemase; structural genomics, NPPSFA, national project on P structural and functional analyses; 2.20A {Pyrococcus horikoshii}
Probab=25.36 E-value=64 Score=24.86 Aligned_cols=34 Identities=21% Similarity=0.466 Sum_probs=24.3
Q ss_pred HHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCCCC
Q psy13219 90 QMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFTMP 126 (193)
Q Consensus 90 ~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~~p 126 (193)
+.+++.+++|+++|++.+-+. .+ ...+|..+.+|
T Consensus 66 ~~~~~l~~~g~d~iviaCnta-~~--~~~l~~~~~iP 99 (228)
T 2eq5_A 66 RLAKEFEREGVDAIIISCAAD-PA--VEKVRKLLSIP 99 (228)
T ss_dssp HHHHHHHHTTCSEEEECSTTC-TT--HHHHHHHCSSC
T ss_pred HHHHHHHHCCCCEEEEeCCch-HH--HHHHHHhCCCC
Confidence 335566789999999999887 44 34566556666
No 226
>2b5g_A Diamine acetyltransferase 1; structural genomics, PSI, protein structure initiative, NEW research center for structural genomics, nysgxrc; HET: ALY; 1.70A {Homo sapiens} SCOP: d.108.1.1 PDB: 2b4d_A* 2jev_A* 2g3t_A 2f5i_A 2b3u_A 2b3v_A* 2b4b_A* 2b58_A* 2fxf_A* 3bj7_A* 3bj8_A*
Probab=25.35 E-value=54 Score=22.66 Aligned_cols=25 Identities=16% Similarity=0.090 Sum_probs=19.7
Q ss_pred HHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 86 ALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
.+...+++.|.+.|++.|.++++..
T Consensus 108 ~ll~~~~~~~~~~g~~~i~l~~~~~ 132 (171)
T 2b5g_A 108 EILKNLSQVAMRCRCSSMHFLVAEW 132 (171)
T ss_dssp HHHHHHHHHHHHHTCSEEEEEEETT
T ss_pred HHHHHHHHHHHHCCCCEEEEEEccc
Confidence 4556677777788999999999864
No 227
>3i09_A Periplasmic branched-chain amino acid-binding Pro; type I periplasmic binding protein, structural genomics, JOI for structural genomics; HET: MSE CIT; 1.80A {Burkholderia mallei}
Probab=25.34 E-value=1.4e+02 Score=24.14 Aligned_cols=62 Identities=11% Similarity=0.053 Sum_probs=30.0
Q ss_pred HHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 40 VATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 40 ~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
.+++..+.+.++|++..+.++..+.+ . ...+..|++.. .+......+++-+.+.|.+-+.+-
T Consensus 85 ~a~~~~~~~~~ip~i~~~~~~~~~~~---~-~~~~~~f~~~~-~~~~~~~~~~~~l~~~g~~~vaii 146 (375)
T 3i09_A 85 LSMNQVAAEKKKVYINIGAGADTLTN---E-QCTPYTVHYAY-DTMALAKGTGSAVVKQGGKTWFFL 146 (375)
T ss_dssp HHHHHHHHHHTCEEEECSCCCGGGGT---T-TCCTTEEECSC-CHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHHcCceEEEeCCCchhhhc---c-cCCCcEEEeeC-ChHHHHHHHHHHHHHcCCceEEEE
Confidence 45666777777777765433222211 0 11233454432 334444455555555566554443
No 228
>2aam_A Hypothetical protein TM1410; structural genomics, joint center for structural genomics, J protein structure initiative, PSI-2, hydrolase; HET: MSE UNL; 2.20A {Thermotoga maritima} SCOP: c.1.8.15
Probab=25.32 E-value=48 Score=27.79 Aligned_cols=25 Identities=16% Similarity=0.437 Sum_probs=21.0
Q ss_pred HHHHHHHHHHHHcCCcEEEE-eeccC
Q psy13219 86 ALSLQMVQRAERSGYSAIVI-TMDTA 110 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~Alvv-TVD~p 110 (193)
+++.+.++++.+.||.++++ |||+.
T Consensus 122 ~i~~~rl~~~~~kG~DGvflDnvD~y 147 (309)
T 2aam_A 122 EIVFSYLDRVIDQGFKGIYLDRIDSF 147 (309)
T ss_dssp HHHHHHHHHHHHTTCSEEEEECTTHH
T ss_pred HHHHHHHHHHHHcCCCeEeecccchh
Confidence 56667888999999999999 78865
No 229
>3o0f_A Putative metal-dependent phosphoesterase; structural genomics, joint center for structural genomics, J protein structure initiative; HET: AMP; 1.94A {Bifidobacterium adolescentis} PDB: 3e0f_A*
Probab=25.31 E-value=46 Score=27.80 Aligned_cols=29 Identities=17% Similarity=0.264 Sum_probs=22.4
Q ss_pred HHHHHHHHHHcCCcEEEEeeccCCCCCch
Q psy13219 88 SLQMVQRAERSGYSAIVITMDTAVLGSRY 116 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvTVD~pv~G~Re 116 (193)
.++++++|++.|+++|.+|==..+.|..+
T Consensus 30 ~~elv~~A~~~Gl~~iaiTDH~~~~g~~~ 58 (301)
T 3o0f_A 30 PRTLVEQARKLGLHGVAIADHDTTAGWDE 58 (301)
T ss_dssp HHHHHHHHHHTTCSEEEECCBTCCTTHHH
T ss_pred HHHHHHHHHHcCCCEEEEcCCCccccHHH
Confidence 45799999999999999985444556543
No 230
>2cnt_A Modification of 30S ribosomal subunit protein S18; N-alpha acetylation, GCN5-N-acetyltransferase, ribosomal Pro acetyltransferase, GNAT; HET: COA; 2.4A {Salmonella typhimurium} PDB: 2cnm_A* 2cns_A*
Probab=25.27 E-value=55 Score=22.83 Aligned_cols=38 Identities=11% Similarity=0.078 Sum_probs=24.7
Q ss_pred HHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCC
Q psy13219 86 ALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKF 123 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~ 123 (193)
.+...+++.|.+.|++.|.++|+..-...+.-=.|.||
T Consensus 83 ~ll~~~~~~~~~~g~~~i~l~v~~~N~~a~~~y~k~GF 120 (160)
T 2cnt_A 83 MLLEHLIDELETRGVVTLWLEVRASNAAAIALYESLGF 120 (160)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHHTC
T ss_pred HHHHHHHHHHHHcCCcEEEEEEecCCHHHHHHHHHCCC
Confidence 45666777788889999999998643222222234565
No 231
>1tx2_A DHPS, dihydropteroate synthase; folate biosynthesis, pterine, MA transferase; HET: 680; 1.83A {Bacillus anthracis} SCOP: c.1.21.1 PDB: 1tww_A* 1twz_A* 1tx0_A* 1tws_A* 3h21_A* 3h22_A* 3h23_A* 3h24_A* 3h26_A* 3h2a_A* 3h2c_A* 3h2e_A* 3h2f_A* 3h2m_A* 3h2n_A* 3h2o_A* 3tya_A* 3tyb_A* 3tyc_A* 3tyd_A* ...
Probab=25.16 E-value=63 Score=26.95 Aligned_cols=21 Identities=19% Similarity=0.276 Sum_probs=17.6
Q ss_pred HHHHHHHHHHHHcCCc--EEEEe
Q psy13219 86 ALSLQMVQRAERSGYS--AIVIT 106 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~--AlvvT 106 (193)
+..++.+++|+++|++ -|++.
T Consensus 182 ~~l~~~i~~a~~~GI~~~~IilD 204 (297)
T 1tx2_A 182 ADLYDSIKIAKDAGVRDENIILD 204 (297)
T ss_dssp HHHHHHHHHHHHTTCCGGGEEEE
T ss_pred HHHHHHHHHHHHcCCChhcEEEe
Confidence 5667889999999998 68876
No 232
>3q58_A N-acetylmannosamine-6-phosphate 2-epimerase; TIM beta/alpha barrel, ribulose-phosphate binding barrel, carbohydrate metabolic process; HET: BTB; 1.80A {Salmonella enterica subsp}
Probab=25.04 E-value=88 Score=24.72 Aligned_cols=67 Identities=22% Similarity=0.229 Sum_probs=38.7
Q ss_pred cCCchHHHHHHHHHhccCceeeeccCccccHHHHHhhCCCCceE---EE------EEeecCHHHHHHHHHHHHHcCCcEE
Q psy13219 33 LAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLW---LQ------MYIFKDRALSLQMVQRAERSGYSAI 103 (193)
Q Consensus 33 l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~w---fQ------lY~~~dr~~~~~ll~RAe~AG~~Al 103 (193)
|.+++--..+|+|+.+.|...+- ..+..-+++|.+.. +-|.. -+ +|+..+ .+-++.+.++|+..+
T Consensus 32 l~~~~~~~~~A~a~~~~Ga~~i~-~~~~~~i~~ir~~v-~~Pvig~~k~~~~~~~~~I~~~----~~~i~~~~~aGad~I 105 (229)
T 3q58_A 32 MDKPEIVAAMAQAAASAGAVAVR-IEGIENLRTVRPHL-SVPIIGIIKRDLTGSPVRITPY----LQDVDALAQAGADII 105 (229)
T ss_dssp TCSHHHHHHHHHHHHHTTCSEEE-EESHHHHHHHGGGC-CSCEEEECBCCCSSCCCCBSCS----HHHHHHHHHHTCSEE
T ss_pred CCCcchHHHHHHHHHHCCCcEEE-ECCHHHHHHHHHhc-CCCEEEEEeecCCCCceEeCcc----HHHHHHHHHcCCCEE
Confidence 33344447899999999988743 33444455555554 23322 12 222222 234667789999977
Q ss_pred EE
Q psy13219 104 VI 105 (193)
Q Consensus 104 vv 105 (193)
++
T Consensus 106 ~l 107 (229)
T 3q58_A 106 AF 107 (229)
T ss_dssp EE
T ss_pred EE
Confidence 55
No 233
>3dcp_A Histidinol-phosphatase; HISK, histidine biosynthesis, NESG, LMR141, structural genomics, PSI-2, protein structure initiative; 2.10A {Listeria monocytogenes str}
Probab=24.95 E-value=52 Score=26.90 Aligned_cols=25 Identities=16% Similarity=0.133 Sum_probs=21.2
Q ss_pred HHHHHHHHHHHcCCcEEEEeeccCC
Q psy13219 87 LSLQMVQRAERSGYSAIVITMDTAV 111 (193)
Q Consensus 87 ~~~~ll~RAe~AG~~AlvvTVD~pv 111 (193)
-.++++++|.+.|++.|++|==.|.
T Consensus 19 ~~~e~~~~A~~~G~~~i~~TdH~~~ 43 (283)
T 3dcp_A 19 DVEEMVLKAIELDFDEYSIVEHAPL 43 (283)
T ss_dssp CHHHHHHHHHHTTCCEEEEEEECCC
T ss_pred CHHHHHHHHHHCCCCEEEEecCCCC
Confidence 3578999999999999999966554
No 234
>3g8r_A Probable spore coat polysaccharide biosynthesis P; structural genomics, protein structure initiative; 2.49A {Chromobacterium violaceum atcc 12472}
Probab=24.91 E-value=46 Score=28.56 Aligned_cols=29 Identities=10% Similarity=0.035 Sum_probs=21.8
Q ss_pred HHHHHHHhccCceeeeccCccccHHHHHhh
Q psy13219 40 VATARAAGMMDAIMILSLMSTTSLEEVRAQ 69 (193)
Q Consensus 40 ~~~araA~~~g~~~~lst~ss~s~eei~~~ 69 (193)
..+-+.+++.|-|++||+.-+ ++|||..+
T Consensus 125 ~pLL~~va~~gKPviLstGms-tl~Ei~~A 153 (350)
T 3g8r_A 125 WPLLERIARSDKPVVASTAGA-RREDIDKV 153 (350)
T ss_dssp HHHHHHHHTSCSCEEEECTTC-CHHHHHHH
T ss_pred HHHHHHHHhhCCcEEEECCCC-CHHHHHHH
Confidence 467777888888888888875 88877544
No 235
>2rbg_A Putative uncharacterized protein ST0493; hypothetical protein, structural genomics, unknown function, NPPSFA; 1.75A {Sulfolobus tokodaii}
Probab=24.90 E-value=74 Score=23.15 Aligned_cols=34 Identities=12% Similarity=0.314 Sum_probs=29.4
Q ss_pred eEEEEEeecCHHHHHHHHHHHHHcCCcEEEEeecc
Q psy13219 75 LWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDT 109 (193)
Q Consensus 75 ~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD~ 109 (193)
.-+.+|.++ ++....++++..+..++++.+-+|-
T Consensus 63 lG~el~~WK-p~eVdkm~~k~~q~~~dGl~iYCDd 96 (126)
T 2rbg_A 63 IGYELFLWK-KNEVDIFLKNLEKSEVDGLLVYCDD 96 (126)
T ss_dssp SEEEEEEEC-GGGHHHHHHHHTTCCCCEEEEEECG
T ss_pred cceEEEEeC-HHHHHHHHHHHHHhCCCceEEEeCC
Confidence 457899888 5667789999999999999999994
No 236
>1ezw_A Coenzyme F420-dependent N5,N10- methylenetetrahydromethanopterin reductase; (beta, alpha)8 barrel, TIM barrel, oxidoreductase; 1.65A {Methanopyrus kandleri} SCOP: c.1.16.3
Probab=24.84 E-value=63 Score=26.80 Aligned_cols=24 Identities=17% Similarity=0.260 Sum_probs=20.6
Q ss_pred cCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 83 KDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 83 ~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
.+.+...++.++||++||..+++.
T Consensus 14 ~~~~~~~~~a~~AE~~Gfd~~w~~ 37 (349)
T 1ezw_A 14 DKPTKIAHLIKVAEDNGFEYAWIC 37 (349)
T ss_dssp SCHHHHHHHHHHHHHTTCCEEEEC
T ss_pred CCHHHHHHHHHHHHHcCCCEEEec
Confidence 456778899999999999999885
No 237
>3q12_A Pantoate--beta-alanine ligase; structural genomics, center for structural genomics of infec diseases, csgid; HET: PAF; 1.58A {Yersinia pestis} SCOP: c.26.1.4 PDB: 3q10_A* 3mue_A 1iho_A 3guz_A*
Probab=24.78 E-value=2e+02 Score=23.90 Aligned_cols=66 Identities=12% Similarity=0.318 Sum_probs=44.9
Q ss_pred ceeecchhccccCCchHHHHHHHHHhccCceeeeccCccc----cHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHH
Q psy13219 22 PVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTT----SLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAER 97 (193)
Q Consensus 22 P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~----s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~ 97 (193)
.|++=||-+ .| | +|.+.+.+.|++.+=..++|-+-+- +-||+.. | +++-+.-. +.+++
T Consensus 26 ~IgfVPTMG-~L-H-~GHlsLv~~Ar~~~d~vVVSIFVNP~QF~~~EDl~~-----------Y-PRtle~D~---~~l~~ 87 (287)
T 3q12_A 26 RIALVPTMG-NL-H-EGHMTLVDEAKTRADVVVVTIFVNPLQFERPDDLAH-----------Y-PRTLQEDC---EKLTR 87 (287)
T ss_dssp CEEEEEECS-SC-C-HHHHHHHHHHHTTSSEEEEEECCCGGGCSSHHHHHH-----------S-CCCHHHHH---HHHHH
T ss_pred eEEEEcCCC-cc-c-HHHHHHHHHHHHhCCEEEEEeccCcccCCCcchhhc-----------C-CCCHHHHH---HHHHH
Confidence 566778633 23 6 8999999999999988888877653 4477753 3 23334333 34478
Q ss_pred cCCcEEEE
Q psy13219 98 SGYSAIVI 105 (193)
Q Consensus 98 AG~~Alvv 105 (193)
+|+.+++.
T Consensus 88 ~gvd~vF~ 95 (287)
T 3q12_A 88 HGADLVFA 95 (287)
T ss_dssp HTCSEEEC
T ss_pred CCCCEEEC
Confidence 89987765
No 238
>3sg0_A Extracellular ligand-binding receptor; structural genomics, PSI-biology; HET: 173; 1.20A {Rhodopseudomonas palustris} PDB: 4dqd_A*
Probab=24.76 E-value=84 Score=25.30 Aligned_cols=63 Identities=5% Similarity=0.038 Sum_probs=31.4
Q ss_pred HHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 40 VATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 40 ~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
.+++..+.+.++|++..+.++..++.. ....+..|++. +.|......+++.+.+.|.+-+.+-
T Consensus 103 ~~~~~~~~~~~ip~v~~~~~~~~~~~~---~~~~~~~~~~~-~~~~~~~~~~~~~l~~~g~~~ia~i 165 (386)
T 3sg0_A 103 LPLIDIAAEAKTPLMTMAAAAILVAPM---DERRKWVYKVV-PNDDIMAEAIGKYIAKTGAKKVGYI 165 (386)
T ss_dssp HHHHHHHHHTTCCEEECCCCGGGTCSC---CTTGGGEEECS-CCHHHHHHHHHHHHHHTTCCEEEEE
T ss_pred HHHHHHHHhcCCeEEEecCCCcccccc---CCCCCcEEecC-CCcHHHHHHHHHHHHhcCCCEEEEE
Confidence 345555666666666544332211100 01123455543 3445566666777767777665443
No 239
>3h5l_A Putative branched-chain amino acid ABC transporter; structural genomics, PSI-2, protein structure initiative; 1.70A {Ruegeria pomeroyi}
Probab=24.67 E-value=1.8e+02 Score=23.96 Aligned_cols=72 Identities=11% Similarity=-0.024 Sum_probs=34.2
Q ss_pred HHHHHHhccCceeeeccCccccH-HHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHc--------CCcEEEEeeccCC
Q psy13219 41 ATARAAGMMDAIMILSLMSTTSL-EEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERS--------GYSAIVITMDTAV 111 (193)
Q Consensus 41 ~~araA~~~g~~~~lst~ss~s~-eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~A--------G~~AlvvTVD~pv 111 (193)
+++..+.+.++|++..+.+ .++ +.+.......+..|++.. .|......+++-++.. |.+-+++-.+.-.
T Consensus 98 a~~~~~~~~~ip~i~~~~~-~~~~~~~~~~~~~~~~~f~~~p-~~~~~~~~~~~~~~~~~~~~~~~~~~~~vail~~~~~ 175 (419)
T 3h5l_A 98 ALHDVAADAGVIAMHANTV-AVHDEMVKSDPDRYWGTFQYDP-PETLYGGGFLKFLKDIEDNGEFSRPNNKIAIITGPGI 175 (419)
T ss_dssp HHHHHHHHHTCEEEECCCC-HHHHHHHHHCTTTCTTEEESSC-CTHHHHHHHHHHHHHHHHTTSCCCSSSEEEEEECSSH
T ss_pred HhHHHHHHcCCeEEEcCcc-hhhhhhhhcCcccCceEEEeCC-chHHHHHHHHHHHHHHHhhccccCCCCEEEEEEcCcc
Confidence 5666777778887764322 222 222211111234566643 4444444455444432 6665555444333
Q ss_pred CCC
Q psy13219 112 LGS 114 (193)
Q Consensus 112 ~G~ 114 (193)
.|.
T Consensus 176 ~g~ 178 (419)
T 3h5l_A 176 YSV 178 (419)
T ss_dssp HHH
T ss_pred hhH
Confidence 343
No 240
>3c8n_A Probable F420-dependent glucose-6-phosphate dehyd FGD1; TIM barrel, non-prolyl CIS-peptide, oxidoreductase; 1.90A {Mycobacterium tuberculosis} PDB: 3b4y_A
Probab=24.46 E-value=60 Score=27.02 Aligned_cols=25 Identities=16% Similarity=0.255 Sum_probs=21.2
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEeecc
Q psy13219 84 DRALSLQMVQRAERSGYSAIVITMDT 109 (193)
Q Consensus 84 dr~~~~~ll~RAe~AG~~AlvvTVD~ 109 (193)
+.+...++.++||++||..+++. |.
T Consensus 36 ~~~~~~~~A~~AE~~Gfd~~w~~-eh 60 (356)
T 3c8n_A 36 APRELVELAVAAEAHGMDSATVS-DH 60 (356)
T ss_dssp CHHHHHHHHHHHHHTTCSEEEEC-CC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEc-cc
Confidence 45778899999999999999985 54
No 241
>2hsa_B 12-oxophytodienoate reductase 3; alpha beta 8 barrel, flavoprotein, jasmonate biosynthesis, oxidoreductase; HET: FMN; 1.50A {Solanum lycopersicum} PDB: 2hs6_A* 3hgs_A* 2hs8_A* 3hgo_A* 1q45_A* 2g5w_A* 2q3o_A*
Probab=24.34 E-value=3.3e+02 Score=23.24 Aligned_cols=20 Identities=25% Similarity=0.423 Sum_probs=16.8
Q ss_pred CHHHHHHHHhcCCCCEEEec
Q psy13219 172 DWDDVRSLVQATKLPIVCKG 191 (193)
Q Consensus 172 tW~di~wlr~~~~lPivlKG 191 (193)
.|+-++++|+.++.||+.=|
T Consensus 307 ~~~~~~~vk~~~~iPvi~~G 326 (402)
T 2hsa_B 307 EARLMRTLRNAYQGTFICSG 326 (402)
T ss_dssp HHHHHHHHHHHCSSCEEEES
T ss_pred hHHHHHHHHHHCCCCEEEeC
Confidence 47778899999999998755
No 242
>1dih_A Dihydrodipicolinate reductase; oxidoreductase; HET: NDP; 2.20A {Escherichia coli} SCOP: c.2.1.3 d.81.1.3 PDB: 1arz_A* 1dru_A* 1drv_A* 1drw_A*
Probab=24.29 E-value=1.1e+02 Score=24.75 Aligned_cols=76 Identities=9% Similarity=0.193 Sum_probs=45.6
Q ss_pred cCCchHHHHHHHHHhccCceeeeccCc--cccHHHHHhhCCCCceEEEEEeec-CH--HHHHHHHHHHHHc---CCcEEE
Q psy13219 33 LAHADGEVATARAAGMMDAIMILSLMS--TTSLEEVRAQNPSTTLWLQMYIFK-DR--ALSLQMVQRAERS---GYSAIV 104 (193)
Q Consensus 33 l~~~~gE~~~araA~~~g~~~~lst~s--s~s~eei~~~~~~~~~wfQlY~~~-dr--~~~~~ll~RAe~A---G~~Alv 104 (193)
+.+|+.-...+++|.++|++++++|.+ ..-.+++.+.....+ -+|.+. .- .+..++++.|.+. +|..=+
T Consensus 79 ft~p~~~~~~~~~a~~~G~~vVigTtG~~~e~~~~L~~~a~~~~---vv~a~N~siGvn~~~~l~~~aa~~~~~~~diei 155 (273)
T 1dih_A 79 FTRPEGTLNHLAFCRQHGKGMVIGTTGFDEAGKQAIRDAAADIA---IVFAANFSVGVNVMLKLLEKAAKVMGDYTDIEI 155 (273)
T ss_dssp CSCHHHHHHHHHHHHHTTCEEEECCCCCCHHHHHHHHHHTTTSC---EEECSCCCHHHHHHHHHHHHHHHHHTTTSEEEE
T ss_pred cCChHHHHHHHHHHHhCCCCEEEECCCCCHHHHHHHHHhcCCCC---EEEEecCcHHHHHHHHHHHHHHHhcCCCCCEEE
Confidence 557888889999999999999998754 222345555443322 234432 22 3445667666542 465544
Q ss_pred Ee------eccCC
Q psy13219 105 IT------MDTAV 111 (193)
Q Consensus 105 vT------VD~pv 111 (193)
+- +|+|.
T Consensus 156 iE~Hh~~K~DaPS 168 (273)
T 1dih_A 156 IEAHHRHKVDAPS 168 (273)
T ss_dssp EEEECTTCCSSSC
T ss_pred EEeecCCCCCCCC
Confidence 43 37764
No 243
>1i12_A Glucosamine-phosphate N-acetyltransferase; GNAT, alpha/beta; HET: ACO; 1.30A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1i1d_A* 1i21_A
Probab=24.27 E-value=84 Score=21.98 Aligned_cols=31 Identities=19% Similarity=0.205 Sum_probs=22.7
Q ss_pred EEeecC-------HHHHHHHHHHHHHcCCcEEEEeecc
Q psy13219 79 MYIFKD-------RALSLQMVQRAERSGYSAIVITMDT 109 (193)
Q Consensus 79 lY~~~d-------r~~~~~ll~RAe~AG~~AlvvTVD~ 109 (193)
+|+..+ +.++..+++.|++.|++.|.++|+.
T Consensus 101 ~~V~~~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~ 138 (160)
T 1i12_A 101 IAVNSKYQGQGLGKLLIDQLVTIGFDYGCYKIILDCDE 138 (160)
T ss_dssp EEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEEECG
T ss_pred EEECHHHcCCCHHHHHHHHHHHHHHHcCCcEEEEEcCh
Confidence 666553 2455667777788899999999875
No 244
>2eui_A Probable acetyltransferase; dimer, structural genomics, PSI, protein structure initiative; 2.80A {Pseudomonas aeruginosa PAO1} SCOP: d.108.1.1
Probab=24.24 E-value=52 Score=22.00 Aligned_cols=46 Identities=11% Similarity=0.065 Sum_probs=27.6
Q ss_pred EEEeecC---H----HHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCC
Q psy13219 78 QMYIFKD---R----ALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKF 123 (193)
Q Consensus 78 QlY~~~d---r----~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~ 123 (193)
.+|+..+ + .+...+++.|.+.|++.+.++++..-...+.-=.|.||
T Consensus 83 ~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf 135 (153)
T 2eui_A 83 DIYVAEEARRQLVADHLLQHAKQMARETHAVRMRVSTSVDNEVAQKVYESIGF 135 (153)
T ss_dssp EEEECTTSCHHHHHHHHHHHHHHHHHHTTEEEEEEEEETTCHHHHHHHHTTTC
T ss_pred EEEEcHHHhcCChHHHHHHHHHHHHHHcCCCEEEEEEecCCHHHHHHHHHcCC
Confidence 5666543 3 34556667777789999999988643222222234555
No 245
>4h89_A GCN5-related N-acetyltransferase; N-acyltransferase superfamily, structural genomics, PSI-BIOL midwest center for structural genomics, MCSG; 1.37A {Kribbella flavida}
Probab=24.18 E-value=80 Score=22.51 Aligned_cols=31 Identities=29% Similarity=0.418 Sum_probs=22.1
Q ss_pred EEEEEeecC-------HHHHHHHHHHHHHcCCcEEEEe
Q psy13219 76 WLQMYIFKD-------RALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 76 wfQlY~~~d-------r~~~~~ll~RAe~AG~~AlvvT 106 (193)
..-+|+..+ +.+++.+++.|++.|++.++++
T Consensus 91 ~~~~~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~~~l~ 128 (173)
T 4h89_A 91 SASFMVAAAARGRGVGRALCQDMIDWAGREGFRAIQFN 128 (173)
T ss_dssp EEEEEECGGGTTSSHHHHHHHHHHHHHHHTTCSEEEEE
T ss_pred EEeeEEEEeeccchHHHHHHHHHHHHHHHCCCcEEEEe
Confidence 345676543 2466777888889999999874
No 246
>1gz0_A Hypothetical tRNA/RRNA methyltransferase YJFH; 2'O-methyltransferase, knot, montreal- kingston bacterial structural genomics initiative, BSGI; 2.5A {Escherichia coli} SCOP: c.116.1.1 d.79.3.3
Probab=24.08 E-value=2.7e+02 Score=22.11 Aligned_cols=47 Identities=17% Similarity=0.183 Sum_probs=34.5
Q ss_pred cHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEeecc
Q psy13219 62 SLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMDT 109 (193)
Q Consensus 62 s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD~ 109 (193)
+++++..... .+.+.=|.=..|+.-+-.++|-|++.|+++++++=+.
T Consensus 94 ~l~~~~~~~~-~~~~lvLd~v~dp~NlGaI~Rta~a~G~~~vil~~~~ 140 (253)
T 1gz0_A 94 DLPDLIASLD-QPFLLILDGVTDPHNLGACLRSADAAGVHAVIVPKDR 140 (253)
T ss_dssp GHHHHHHTCS-SCEEEEEESCCCHHHHHHHHHHHHHHTCSEEEEESSS
T ss_pred HHHHHHhccC-CCEEEEEeCCCCcCcHHHHHHHHHHhCCCEEEEeCCC
Confidence 5666543222 3455656668899999999999999999999986543
No 247
>2wqp_A Polysialic acid capsule biosynthesis protein SIAC; NEUB, inhibitor, TIM barrel, sialic acid synthase, transfera; HET: WQP; 1.75A {Neisseria meningitidis} PDB: 2zdr_A 1xuz_A* 1xuu_A 3cm4_A
Probab=24.06 E-value=49 Score=28.37 Aligned_cols=29 Identities=17% Similarity=0.208 Sum_probs=24.6
Q ss_pred HHHHHHHhccCceeeeccCccccHHHHHhh
Q psy13219 40 VATARAAGMMDAIMILSLMSTTSLEEVRAQ 69 (193)
Q Consensus 40 ~~~araA~~~g~~~~lst~ss~s~eei~~~ 69 (193)
..+-+.+++.|-|++||+.-+ ++|||..+
T Consensus 138 ~~LL~~va~~gkPviLstGma-t~~Ei~~A 166 (349)
T 2wqp_A 138 YPLIKLVASFGKPIILSTGMN-SIESIKKS 166 (349)
T ss_dssp HHHHHHHHTTCSCEEEECTTC-CHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEECCCC-CHHHHHHH
Confidence 578889999999999999886 89988654
No 248
>2fe7_A Probable N-acetyltransferase; structural genomics, pseudomonas aerugi PSI, protein structure initiative; 2.00A {Pseudomonas aeruginosa ucbpp-pa14} SCOP: d.108.1.1
Probab=24.03 E-value=66 Score=21.91 Aligned_cols=25 Identities=8% Similarity=0.008 Sum_probs=18.7
Q ss_pred HHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 86 ALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
.+...+++.|++.|++.+.+++...
T Consensus 108 ~ll~~~~~~~~~~g~~~i~l~~~~~ 132 (166)
T 2fe7_A 108 RLLRELAREAVANDCGRLEWSVLDW 132 (166)
T ss_dssp HHHHHHHHHHHHTTCSEEEEEEETT
T ss_pred HHHHHHHHHHHHCCCCEEEEEEccC
Confidence 4555666677788999999998764
No 249
>1vky_A S-adenosylmethionine:tRNA ribosyltransferase-ISOM; TM0574, struct genomics, JCSG, protein structure initiative, PSI; 2.00A {Thermotoga maritima} SCOP: e.53.1.1
Probab=24.03 E-value=71 Score=27.44 Aligned_cols=47 Identities=11% Similarity=0.210 Sum_probs=23.6
Q ss_pred eeccCccccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 54 ILSLMSTTSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 54 ~lst~ss~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
.+||+-....|+|.+... -.-||.+ .+.+.+.|.+|++.|-+.|.|.
T Consensus 214 G~GTF~PV~~edi~~H~M-HsE~~~V-----~~eta~~in~aka~G~RViAVG 260 (347)
T 1vky_A 214 GIGTFRPVKVEEVEKHKM-HEEFYQV-----PKETVRKLRETRERGNRIVAVG 260 (347)
T ss_dssp -------------------CCCEEEE-----CHHHHHHHHHHHHHTCCEEEES
T ss_pred cCCCCCCccccccccCCc-ccEEEEE-----CHHHHHHHHHHHHcCCeEEEEc
Confidence 346666666788887753 3458877 4778899999999999988774
No 250
>1vli_A Spore coat polysaccharide biosynthesis protein SP; 2636322, JCSG, protein structure initiative, BS SPSE, PSI; 2.38A {Bacillus subtilis} SCOP: b.85.1.1 c.1.10.6
Probab=24.02 E-value=48 Score=28.83 Aligned_cols=29 Identities=14% Similarity=0.255 Sum_probs=25.3
Q ss_pred HHHHHHHhccCceeeeccCccccHHHHHhh
Q psy13219 40 VATARAAGMMDAIMILSLMSTTSLEEVRAQ 69 (193)
Q Consensus 40 ~~~araA~~~g~~~~lst~ss~s~eei~~~ 69 (193)
..+-+.+++.|-|++||+.-+ ++|||..+
T Consensus 148 ~pLL~~va~~gKPViLStGma-Tl~Ei~~A 176 (385)
T 1vli_A 148 LPLLKYVARLNRPMIFSTAGA-EISDVHEA 176 (385)
T ss_dssp HHHHHHHHTTCSCEEEECTTC-CHHHHHHH
T ss_pred HHHHHHHHhcCCeEEEECCCC-CHHHHHHH
Confidence 688999999999999999986 99998655
No 251
>3ij6_A Uncharacterized metal-dependent hydrolase; structural genomics, amidohydrolase, PSI-2, protein structure initiative; 2.00A {Lactobacillus acidophilus}
Probab=23.96 E-value=2.2e+02 Score=23.14 Aligned_cols=14 Identities=7% Similarity=0.012 Sum_probs=6.8
Q ss_pred HHHHHHHHHHcCCc
Q psy13219 88 SLQMVQRAERSGYS 101 (193)
Q Consensus 88 ~~~ll~RAe~AG~~ 101 (193)
...+.+++++.|.-
T Consensus 144 ~~p~~~~~~e~g~p 157 (312)
T 3ij6_A 144 FRPVLAQAAKLHVP 157 (312)
T ss_dssp THHHHHHHHHTTCC
T ss_pred HHHHHHHHHHcCCe
Confidence 34455555555543
No 252
>2xbl_A Phosphoheptose isomerase; capsule; HET: M7P PGE PG4; 1.62A {Burkholderia pseudomallei} PDB: 2x3y_A
Probab=23.91 E-value=1.5e+02 Score=21.73 Aligned_cols=35 Identities=11% Similarity=0.104 Sum_probs=26.2
Q ss_pred ceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEeec
Q psy13219 74 TLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMD 108 (193)
Q Consensus 74 ~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD 108 (193)
...+=+-..+.-..+.+.++.|++.|++.+.||-.
T Consensus 118 d~vI~iS~SG~t~~~~~~~~~ak~~g~~vI~IT~~ 152 (198)
T 2xbl_A 118 DVLIGYSTSGKSPNILAAFREAKAKGMTCVGFTGN 152 (198)
T ss_dssp CEEEEECSSSCCHHHHHHHHHHHHTTCEEEEEECS
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 34444444555567788999999999999999964
No 253
>3lop_A Substrate binding periplasmic protein; protein structure initiative II(PSI II), NYSGXRC, structural genomics; 1.55A {Ralstonia solanacearum}
Probab=23.85 E-value=71 Score=25.81 Aligned_cols=59 Identities=12% Similarity=0.050 Sum_probs=29.0
Q ss_pred HHHH--HHhccCceeeeccCccccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEee
Q psy13219 41 ATAR--AAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 41 ~~ar--aA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTV 107 (193)
+++. .+.+.++|++..+.++..+.+ .+..|++. +.|......+++.+.+.|.+-+.+-.
T Consensus 88 ~~~~~~~~~~~~iP~v~~~~~~~~~~~-------~~~~f~~~-~~~~~~~~~~~~~l~~~g~~~iaii~ 148 (364)
T 3lop_A 88 ALMREGVLAEARLPLVGPATGASSMTT-------DPLVFPIK-ASYQQEIDKMITALVTIGVTRIGVLY 148 (364)
T ss_dssp HHHHTTHHHHHTCCEESCSCCCGGGGS-------CTTEECCS-CCHHHHHHHHHHHHHHTTCCCEEEEE
T ss_pred hhCchhhHHhcCCcEEEcccCcHhhcc-------CCcEEEeC-CChHHHHHHHHHHHHHcCCceEEEEE
Confidence 4444 555556665544332222211 23345443 23445556666666777776554433
No 254
>3tr9_A Dihydropteroate synthase; biosynthesis of cofactors, prosthetic groups, and carriers, transferase; HET: PT1; 1.90A {Coxiella burnetii}
Probab=23.78 E-value=58 Score=27.52 Aligned_cols=65 Identities=20% Similarity=0.129 Sum_probs=35.9
Q ss_pred HHHHHHHhccCceeeeccCccc--cHHHHHhhCCCCceEEEEEeecC----------------HHHHHHHHHHHHHcCCc
Q psy13219 40 VATARAAGMMDAIMILSLMSTT--SLEEVRAQNPSTTLWLQMYIFKD----------------RALSLQMVQRAERSGYS 101 (193)
Q Consensus 40 ~~~araA~~~g~~~~lst~ss~--s~eei~~~~~~~~~wfQlY~~~d----------------r~~~~~ll~RAe~AG~~ 101 (193)
..++++|-++|..++-+-.+.. .+-++++..+ .+. .=+....+ .+..++.+++|+++|++
T Consensus 115 ~~Va~aAl~aGa~iINDVsg~~~~~m~~v~a~~g-~~v-VlMh~~G~P~tmq~~~~ydvv~ev~~~l~~~i~~a~~~GI~ 192 (314)
T 3tr9_A 115 PRVMREAVNTGADMINDQRALQLDDALTTVSALK-TPV-CLMHFPSETRKPGSTTHFYFLQSVKKELQESIQRCKKAGIS 192 (314)
T ss_dssp HHHHHHHHHHTCCEEEETTTTCSTTHHHHHHHHT-CCE-EEECCCCTTCCTTSSCHHHHHHHHHHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHcCCCEEEECCCCCchHHHHHHHHhC-CeE-EEECCCCCCcccccccccchHHHHHHHHHHHHHHHHHcCCC
Confidence 3567777777877776644322 2333433322 111 11222211 35567888999999997
Q ss_pred --EEEEe
Q psy13219 102 --AIVIT 106 (193)
Q Consensus 102 --AlvvT 106 (193)
-|++.
T Consensus 193 ~~~IilD 199 (314)
T 3tr9_A 193 EDRIIID 199 (314)
T ss_dssp GGGEEEE
T ss_pred HhHEEEe
Confidence 67754
No 255
>3dsb_A Putative acetyltransferase; APC60368.2, ST genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 1.48A {Clostridium difficile}
Probab=23.72 E-value=83 Score=20.99 Aligned_cols=39 Identities=3% Similarity=0.004 Sum_probs=26.6
Q ss_pred HHHHHHHHHHHHHcC-CcEEEEeeccCCCCCchhhhhcCC
Q psy13219 85 RALSLQMVQRAERSG-YSAIVITMDTAVLGSRYRDLKNKF 123 (193)
Q Consensus 85 r~~~~~ll~RAe~AG-~~AlvvTVD~pv~G~Re~d~r~~~ 123 (193)
+.+...+++.|++.| ++.+.++++..-...+.-=.+.||
T Consensus 103 ~~ll~~~~~~~~~~~~~~~i~~~~~~~n~~a~~~y~k~Gf 142 (157)
T 3dsb_A 103 NYLFNYIKNICDKDENIVGMRLYVEKENINAKATYESLNM 142 (157)
T ss_dssp HHHHHHHHHHHHHCTTEEEEEEEEETTCTTHHHHHHTTTC
T ss_pred HHHHHHHHHHHHhcCCceEEEEecCCCCHHHHHHHHHCCC
Confidence 356677778888899 999999998764333333344555
No 256
>1yx1_A Hypothetical protein PA2260; structural genomics, PSI, PROT structure initiative; HET: MSE; 1.80A {Pseudomonas aeruginosa PAO1} SCOP: c.1.15.7
Probab=23.71 E-value=2.5e+02 Score=21.55 Aligned_cols=69 Identities=16% Similarity=0.081 Sum_probs=41.2
Q ss_pred HHHHHHHhccCceeeeccCcc----ccHHHHHhhCC-CCceEEEEEeec-----CHHHHHHHHHHHHHcCCcEEEEeecc
Q psy13219 40 VATARAAGMMDAIMILSLMST----TSLEEVRAQNP-STTLWLQMYIFK-----DRALSLQMVQRAERSGYSAIVITMDT 109 (193)
Q Consensus 40 ~~~araA~~~g~~~~lst~ss----~s~eei~~~~~-~~~~wfQlY~~~-----dr~~~~~ll~RAe~AG~~AlvvTVD~ 109 (193)
....+.|++.|+++++-..+. ..++++++... .+.. +-+-... +-+...++++..++.|-. +-+++|+
T Consensus 87 ~~~i~~A~~lGa~~v~~~~g~~~~~~~l~~l~~~a~~~Gv~-l~lEn~~~~~~~~~~~~~~ll~~v~~~~~~-vg~~~D~ 164 (264)
T 1yx1_A 87 EPTLRRAEACGAGWLKVSLGLLPEQPDLAALGRRLARHGLQ-LLVENDQTPQGGRIEVLERFFRLAERQQLD-LAMTFDI 164 (264)
T ss_dssp HHHHHHHHHTTCSEEEEEEECCCSSCCHHHHHHHHTTSSCE-EEEECCSSHHHHCHHHHHHHHHHHHHTTCS-EEEEEET
T ss_pred HHHHHHHHHcCCCEEEEecCCCCcHHHHHHHHHHHHhcCCE-EEEecCCCCCCCCHHHHHHHHHHHHhcCCC-eEEEEeh
Confidence 356677788888877532221 26776655432 2221 1122122 345667788887777877 9999999
Q ss_pred C
Q psy13219 110 A 110 (193)
Q Consensus 110 p 110 (193)
-
T Consensus 165 g 165 (264)
T 1yx1_A 165 G 165 (264)
T ss_dssp T
T ss_pred h
Confidence 4
No 257
>4fgs_A Probable dehydrogenase protein; PSI-biology, nysgrc, structural genomics, NEW YORK structura genomics research consortium, three layer; 1.76A {Rhizobium etli}
Probab=23.63 E-value=1.1e+02 Score=24.80 Aligned_cols=67 Identities=12% Similarity=0.084 Sum_probs=47.7
Q ss_pred HHHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHH-cC-CcEEEEe
Q psy13219 39 EVATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAER-SG-YSAIVIT 106 (193)
Q Consensus 39 E~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~-AG-~~AlvvT 106 (193)
=.++|+.-++.|.-.++...+...+++..+..+.....+|.- -.|.+..+++++++++ .| ...||-.
T Consensus 42 G~aiA~~la~~Ga~V~i~~r~~~~l~~~~~~~g~~~~~~~~D-v~~~~~v~~~~~~~~~~~G~iDiLVNN 110 (273)
T 4fgs_A 42 GLAAAKRFVAEGARVFITGRRKDVLDAAIAEIGGGAVGIQAD-SANLAELDRLYEKVKAEAGRIDVLFVN 110 (273)
T ss_dssp HHHHHHHHHHTTCEEEEEESCHHHHHHHHHHHCTTCEEEECC-TTCHHHHHHHHHHHHHHHSCEEEEEEC
T ss_pred HHHHHHHHHHCCCEEEEEECCHHHHHHHHHHcCCCeEEEEec-CCCHHHHHHHHHHHHHHcCCCCEEEEC
Confidence 368999999999988888777777777766655445556554 3578888999999865 44 4444433
No 258
>4eyg_A Twin-arginine translocation pathway signal; PSI-biology, MCSG, midwest center for structural genomics, transporter; HET: VNL; 1.86A {Rhodopseudomonas palustris} PDB: 4ey3_A* 3t0n_A* 4eyk_A*
Probab=23.61 E-value=99 Score=24.78 Aligned_cols=18 Identities=22% Similarity=0.075 Sum_probs=11.2
Q ss_pred HHHHHHHhccCceeeecc
Q psy13219 40 VATARAAGMMDAIMILSL 57 (193)
Q Consensus 40 ~~~araA~~~g~~~~lst 57 (193)
.+++..+.+.++|++..+
T Consensus 86 ~~~~~~~~~~~ip~i~~~ 103 (368)
T 4eyg_A 86 LAAAPLATQAKVPEIVMA 103 (368)
T ss_dssp HHHHHHHHHHTCCEEESS
T ss_pred HHHHHHHHhCCceEEecc
Confidence 455566666777776543
No 259
>1rhc_A F420-dependent alcohol dehydrogenase; (alpha, beta)8 barrel, oxidoreductase; HET: F42; 1.80A {Methanoculleus thermophilus} SCOP: c.1.16.3
Probab=23.54 E-value=59 Score=26.57 Aligned_cols=23 Identities=22% Similarity=0.398 Sum_probs=20.1
Q ss_pred CHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 84 DRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 84 dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
+.+...++.+.||++||..+++.
T Consensus 15 ~~~~~~~~a~~AE~~Gfd~~w~~ 37 (330)
T 1rhc_A 15 RPMDALEQAIRAEKVGFDSVWVD 37 (330)
T ss_dssp CHHHHHHHHHHHHHHTCSEEEEC
T ss_pred CHHHHHHHHHHHHHcCCCEEEEc
Confidence 55778899999999999999985
No 260
>1yr0_A AGR_C_1654P, phosphinothricin acetyltransferase; structural genomics, protein structure initiative, NYSGXRC, PSI; 2.00A {Agrobacterium tumefaciens str} SCOP: d.108.1.1
Probab=23.48 E-value=59 Score=23.02 Aligned_cols=33 Identities=15% Similarity=0.432 Sum_probs=24.6
Q ss_pred EEEeecC-------HHHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 78 QMYIFKD-------RALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 78 QlY~~~d-------r~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
.+|+..+ +++.+.+++.|++.|++.|.++|...
T Consensus 88 ~~~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~ 127 (175)
T 1yr0_A 88 SVYVHKDARGHGIGKRLMQALIDHAGGNDVHVLIAAIEAE 127 (175)
T ss_dssp EEEECTTSTTSSHHHHHHHHHHHHHHTTTCCEEEEEEETT
T ss_pred EEEECccccCCCHHHHHHHHHHHHHHhCCccEEEEEecCC
Confidence 4677553 35667777888888999999998753
No 261
>2yci_X 5-methyltetrahydrofolate corrinoid/iron sulfur PR methyltransferase; 1.78A {Carboxydothermus hydrogenoformans} PDB: 2ycj_A* 2yck_X*
Probab=23.41 E-value=1.5e+02 Score=24.12 Aligned_cols=24 Identities=21% Similarity=0.344 Sum_probs=16.2
Q ss_pred HHHHHHHHHHHHHcCCcE--EEEeec
Q psy13219 85 RALSLQMVQRAERSGYSA--IVITMD 108 (193)
Q Consensus 85 r~~~~~ll~RAe~AG~~A--lvvTVD 108 (193)
.+..++++++|+++|++. |++.-=
T Consensus 146 ~~~l~~~~~~a~~~Gi~~~~IilDPg 171 (271)
T 2yci_X 146 SQLAMELVANADAHGIPMTELYIDPL 171 (271)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEECC
T ss_pred HHHHHHHHHHHHHCCCCcccEEEecC
Confidence 455667778888888775 666533
No 262
>3i65_A Dihydroorotate dehydrogenase homolog, mitochondrial; triazolopyrimidine,inhibitor, DSM1, FAD, flavoprotein, membrane, mitochondrion; HET: JZ8 FMN ORO LDA; 2.00A {Plasmodium falciparum 3D7} PDB: 3i68_A* 3i6r_A* 3o8a_A* 3sfk_A*
Probab=23.40 E-value=39 Score=29.69 Aligned_cols=25 Identities=12% Similarity=0.107 Sum_probs=0.0
Q ss_pred cCCCCCCCcceECCceeCCceeecc
Q psy13219 3 RNVCDRDSGLTVLGTRYRCPVGIAP 27 (193)
Q Consensus 3 ~dv~~~d~~t~~lG~~~~~P~~iaP 27 (193)
+....+.++|+++|.++.-||++|.
T Consensus 77 ~~~~~~~l~v~~~Gl~f~NPvglAA 101 (415)
T 3i65_A 77 TSNDSIYACTNIKHLDFINPFGVAA 101 (415)
T ss_dssp CSCCCGGGCEEETTEEESSSEEECT
T ss_pred cccccccccEEECCEECCCCCEECC
No 263
>1b73_A Glutamate racemase; isomerase; 2.30A {Aquifex pyrophilus} SCOP: c.78.2.1 c.78.2.1 PDB: 1b74_A*
Probab=23.39 E-value=40 Score=26.91 Aligned_cols=37 Identities=27% Similarity=0.393 Sum_probs=27.1
Q ss_pred HHHHHHHHHHcCCcEEEEeeccCCC-CCchhhhhcCCCCC
Q psy13219 88 SLQMVQRAERSGYSAIVITMDTAVL-GSRYRDLKNKFTMP 126 (193)
Q Consensus 88 ~~~ll~RAe~AG~~AlvvTVD~pv~-G~Re~d~r~~~~~p 126 (193)
+.+.+++.++.|+++|++.+.+... + -..+|..+.+|
T Consensus 51 ~~~~~~~L~~~g~d~iviaCnTa~~~~--~~~lr~~~~iP 88 (254)
T 1b73_A 51 SLECAGFLKDKGVDIIVVACNTASAYA--LERLKKEINVP 88 (254)
T ss_dssp HHHHHHHHHTTTCSEEEECCHHHHTTS--HHHHHHHSSSC
T ss_pred HHHHHHHHHHCCCCEEEEeCchhhHHH--HHHHHHhCCCC
Confidence 3456667778899999999999863 4 44566666666
No 264
>3gg7_A Uncharacterized metalloprotein; structural genomics, unknown function, plasmid, PSI-2, protein structure initiative; 1.50A {Deinococcus radiodurans} SCOP: c.1.9.0
Probab=23.23 E-value=39 Score=27.31 Aligned_cols=21 Identities=10% Similarity=0.256 Sum_probs=17.3
Q ss_pred HHHHHHHHHcCCcEEEEeecc
Q psy13219 89 LQMVQRAERSGYSAIVITMDT 109 (193)
Q Consensus 89 ~~ll~RAe~AG~~AlvvTVD~ 109 (193)
.++++||+++|+..+++++|.
T Consensus 17 ~~vl~~a~~~gV~~i~v~~~~ 37 (254)
T 3gg7_A 17 VAVARACEERQLTVLSVTTTP 37 (254)
T ss_dssp HHHHHHHHHTTCEEEECCSSG
T ss_pred HHHHHHHHHCCCcEEEecCCH
Confidence 368999999999988877664
No 265
>1qsm_A HPA2 histone acetyltransferase; protein-acetyl coenzyme A complex; HET: ACO; 2.40A {Saccharomyces cerevisiae} SCOP: d.108.1.1 PDB: 1qso_A
Probab=23.23 E-value=78 Score=21.06 Aligned_cols=36 Identities=14% Similarity=0.390 Sum_probs=25.4
Q ss_pred eEE-EEEeecC---H----HHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 75 LWL-QMYIFKD---R----ALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 75 ~wf-QlY~~~d---r----~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
.++ .+|+..+ + .+...+++.|++.|++.+.++|+..
T Consensus 84 ~~i~~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~~~ 127 (152)
T 1qsm_A 84 IYINDLYVDENSRVKGAGGKLIQFVYDEADKLGTPSVYWCTDES 127 (152)
T ss_dssp EEEEEEEECGGGCSSSHHHHHHHHHHHHHHHTTCCCEEEEEETT
T ss_pred eEEEEEEechhcccCCHHHHHHHHHHHHHHHcCCCeEEEEeeCC
Confidence 344 6777553 2 4556667777788999999998854
No 266
>3eo4_A Uncharacterized protein MJ1062; APC60792.2,MJ_1062,methanocaldococcus jannaschii DSM 2661, S genomics, PSI-2; HET: MES PG6; 2.19A {Methanocaldococcus jannaschii}
Probab=23.17 E-value=70 Score=22.13 Aligned_cols=39 Identities=13% Similarity=-0.014 Sum_probs=25.7
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCC
Q psy13219 85 RALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKF 123 (193)
Q Consensus 85 r~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~ 123 (193)
+++...+++.|+..|++.|.+.|+..-..-+.-=.|.||
T Consensus 109 ~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~y~k~GF 147 (164)
T 3eo4_A 109 RHSVSLVLKWLKNIGYKKAHARILENNIRSIKLFESLGF 147 (164)
T ss_dssp HHHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHhCCCcEEEEEeCCCCHHHHHHHHHCCC
Confidence 356667888888889999999998653222222234455
No 267
>2q7b_A Acetyltransferase, GNAT family; NP_689019.1, structural GEN joint center for structural genomics, JCSG; HET: MSE FLC; 2.00A {Streptococcus agalactiae 2603V}
Probab=23.16 E-value=69 Score=22.89 Aligned_cols=38 Identities=18% Similarity=0.152 Sum_probs=23.7
Q ss_pred HHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCC
Q psy13219 86 ALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKF 123 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~ 123 (193)
.+...+++.|++.|++.|.++++..-...+.-=.|.||
T Consensus 117 ~ll~~~~~~a~~~g~~~i~l~~~~~N~~a~~~y~k~GF 154 (181)
T 2q7b_A 117 KLFERFMLFARASKFTRIVLDTPEKEKRSHFFYENQGF 154 (181)
T ss_dssp HHHHHHHHHHHHTTCCEEEEEEETTCHHHHHHHHTTTC
T ss_pred HHHHHHHHHHHHCCCcEEEEEecCCCHHHHHHHHHCCC
Confidence 45556666777789999999988643222222234555
No 268
>2ge3_A Probable acetyltransferase; structural GEN PSI, protein structure initiative, midwest center for struc genomics, MCSG; HET: ACO; 2.25A {Agrobacterium tumefaciens} SCOP: d.108.1.1
Probab=23.04 E-value=57 Score=22.81 Aligned_cols=35 Identities=20% Similarity=0.211 Sum_probs=25.4
Q ss_pred EEEEEeecC-------HHHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 76 WLQMYIFKD-------RALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 76 wfQlY~~~d-------r~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
.+.+|+..+ +++...+++.|.+.|++.|.++|+.-
T Consensus 88 ~~~~~v~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~v~~~ 129 (170)
T 2ge3_A 88 TLGMGILPAYRNKGLGARLMRRTLDAAHEFGLHRIELSVHAD 129 (170)
T ss_dssp EEEEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred EEEEEECHHHhCCCHHHHHHHHHHHHHHHCCceEEEEEEEcC
Confidence 345676543 24566777888888999999999864
No 269
>1rvg_A Fructose-1,6-bisphosphate aldolase; class II aldolase, metal-depdendent aldolase, lyase; 2.00A {Thermus aquaticus} SCOP: c.1.10.2 PDB: 1rv8_A 2fjk_A*
Probab=23.01 E-value=65 Score=27.09 Aligned_cols=61 Identities=25% Similarity=0.352 Sum_probs=0.0
Q ss_pred HHHHHHHhccCceeeeccCccc-----------cHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 40 VATARAAGMMDAIMILSLMSTT-----------SLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 40 ~~~araA~~~g~~~~lst~ss~-----------s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
.++.+||.+.+.|.+|...... -++..++ ...|..+.| |.....+.+.+|-++||+-++++
T Consensus 31 ~Ail~AAee~~sPvIlq~s~g~~~y~g~~~~~~~v~~~a~--~~VPValHl----DHg~~~e~~~~ai~~GFtSVMiD 102 (305)
T 1rvg_A 31 QAVLEAAEEQRSPVILALSEGAMKYGGRALTLMAVELAKE--ARVPVAVHL----DHGSSYESVLRALRAGFTSVMID 102 (305)
T ss_dssp HHHHHHHHHTTCCEEEEEEHHHHHHHHHHHHHHHHHHHHH--CSSCEEEEE----EEECSHHHHHHHHHTTCSEEEEC
T ss_pred HHHHHHHHHhCCCEEEECChhHHhhCCHHHHHHHHHHHHh--CCCcEEEEC----CCCCCHHHHHHHHHcCCCeeeeC
No 270
>4ag7_A Glucosamine-6-phosphate N-acetyltransferase; HET: COA; 1.55A {Caenorhabditis elegans} PDB: 4ag9_A*
Probab=23.00 E-value=70 Score=21.88 Aligned_cols=24 Identities=17% Similarity=0.123 Sum_probs=19.1
Q ss_pred HHHHHHHHHHHHcCCcEEEEeecc
Q psy13219 86 ALSLQMVQRAERSGYSAIVITMDT 109 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~AlvvTVD~ 109 (193)
.++..+++.|++.|++.+.++++.
T Consensus 120 ~Ll~~~~~~a~~~g~~~i~l~~~~ 143 (165)
T 4ag7_A 120 VLLKTLVSLGKSLGVYKISLECVP 143 (165)
T ss_dssp HHHHHHHHHHHHHTCSEEEECSCG
T ss_pred HHHHHHHHHHHHcCCeEEEEEeCH
Confidence 466677788888999999998754
No 271
>1h1y_A D-ribulose-5-phosphate 3-epimerase; oxidative pentose phosphate pathway, isomerase; 1.87A {Oryza sativa} SCOP: c.1.2.2 PDB: 1h1z_A
Probab=22.98 E-value=1.2e+02 Score=23.47 Aligned_cols=23 Identities=13% Similarity=0.242 Sum_probs=18.3
Q ss_pred HHHHHHHHcCCcEEEEeeccCCC
Q psy13219 90 QMVQRAERSGYSAIVITMDTAVL 112 (193)
Q Consensus 90 ~ll~RAe~AG~~AlvvTVD~pv~ 112 (193)
+.++.+.++|+..+.+..+....
T Consensus 78 ~~i~~~~~agad~v~vH~~~~~~ 100 (228)
T 1h1y_A 78 DYVEPLAKAGASGFTFHIEVSRD 100 (228)
T ss_dssp GGHHHHHHHTCSEEEEEGGGCTT
T ss_pred HHHHHHHHcCCCEEEECCCCccc
Confidence 46788888999999999887543
No 272
>2dvt_A Thermophilic reversible gamma-resorcylate decarbo; TIM barrel, lyase; 1.70A {Rhizobium SP} SCOP: c.1.9.15 PDB: 2dvu_A* 2dvx_A* 3s4t_A*
Probab=22.88 E-value=1.6e+02 Score=23.40 Aligned_cols=47 Identities=19% Similarity=0.251 Sum_probs=27.9
Q ss_pred HHHHHhhCCCCceEEEEEeecCHHHHHHHHHHH-HHcCCcEEEEeecc
Q psy13219 63 LEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRA-ERSGYSAIVITMDT 109 (193)
Q Consensus 63 ~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RA-e~AG~~AlvvTVD~ 109 (193)
+.++++..|+....+=...+.|.+...+.|+|+ ++.|+++|-+..|.
T Consensus 84 ~~~~~~~~p~r~~~~~~v~p~~~~~~~~el~~~~~~~g~~gi~i~~~~ 131 (327)
T 2dvt_A 84 LAEECAKRPDRFLAFAALPLQDPDAATEELQRCVNDLGFVGALVNGFS 131 (327)
T ss_dssp HHHHHHHCTTTEEEEECCCTTSHHHHHHHHHHHHHTTCCCEEEEESSB
T ss_pred HHHHHhhCCCceEEEeecCcCCHHHHHHHHHHHHhcCCceEEEECCCC
Confidence 344444555422222222345666566778887 45799999888875
No 273
>2xhz_A KDSD, YRBH, arabinose 5-phosphate isomerase; lipopolysaccharide biogenesis; 2.60A {Escherichia coli}
Probab=22.87 E-value=1.7e+02 Score=21.19 Aligned_cols=35 Identities=11% Similarity=0.030 Sum_probs=26.7
Q ss_pred ceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEeec
Q psy13219 74 TLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMD 108 (193)
Q Consensus 74 ~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD 108 (193)
...+=+-..+.-..+.+.++.|++.|++.+.||-.
T Consensus 98 d~vI~iS~sG~t~~~~~~~~~ak~~g~~vi~IT~~ 132 (183)
T 2xhz_A 98 DVVIAISNSGESSEITALIPVLKRLHVPLICITGR 132 (183)
T ss_dssp CEEEEECSSSCCHHHHHHHHHHHTTTCCEEEEESC
T ss_pred CEEEEEeCCCCCHHHHHHHHHHHHCCCCEEEEECC
Confidence 34444455556667888999999999999999975
No 274
>3nav_A Tryptophan synthase alpha chain; alpha subunit, structural genomics, CSG center for structural genomics of infectious diseases; 2.10A {Vibrio cholerae o1 biovar el tor} SCOP: c.1.2.4
Probab=22.83 E-value=61 Score=26.59 Aligned_cols=48 Identities=27% Similarity=0.408 Sum_probs=30.2
Q ss_pred HHHHHhhCCCCceEEEEEeec-CHHHHHHHHHHHHHcCCcEEEEeeccCC
Q psy13219 63 LEEVRAQNPSTTLWLQMYIFK-DRALSLQMVQRAERSGYSAIVITMDTAV 111 (193)
Q Consensus 63 ~eei~~~~~~~~~wfQlY~~~-dr~~~~~ll~RAe~AG~~AlvvTVD~pv 111 (193)
++++.+...+.|..+-.|.+. ..--.++.+++|.++|+..+++ .|.|.
T Consensus 88 v~~~r~~~~~~Pivlm~Y~n~v~~~g~~~f~~~~~~aGvdGvIi-pDlp~ 136 (271)
T 3nav_A 88 IAQIRARNPETPIGLLMYANLVYARGIDDFYQRCQKAGVDSVLI-ADVPT 136 (271)
T ss_dssp HHHHHHHCTTSCEEEEECHHHHHHTCHHHHHHHHHHHTCCEEEE-TTSCG
T ss_pred HHHHHhcCCCCCEEEEecCcHHHHHhHHHHHHHHHHCCCCEEEE-CCCCH
Confidence 344444423455555556543 1112478999999999998776 68876
No 275
>3ipc_A ABC transporter, substrate binding protein (amino; venus flytrap domain, transport protein; 1.30A {Agrobacterium tumefaciens} PDB: 3ip5_A 3ip6_A 3ip7_A 3ip9_A 3ipa_A
Probab=22.67 E-value=1.2e+02 Score=24.28 Aligned_cols=62 Identities=6% Similarity=-0.059 Sum_probs=32.5
Q ss_pred HHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHc-CCcEEEEee
Q psy13219 40 VATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERS-GYSAIVITM 107 (193)
Q Consensus 40 ~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~A-G~~AlvvTV 107 (193)
.+++..+.+.++|++..+.++..+.+ ...+..|++. +.|......+++.+.+. |.+-+.+-.
T Consensus 83 ~~~~~~~~~~~ip~v~~~~~~~~~~~-----~~~~~~~~~~-~~~~~~~~~~~~~l~~~~g~~~iaii~ 145 (356)
T 3ipc_A 83 IPASEVYAENGILEITPAATNPVFTE-----RGLWNTFRTC-GRDDQQGGIAGKYLADHFKDAKVAIIH 145 (356)
T ss_dssp HHHHHHHHTTTCEEEESSCCCGGGGS-----SCCTTEEESS-CCHHHHHHHHHHHHHHHCTTCCEEEEE
T ss_pred HHHHHHHHhCCCeEEecCCCCcHhhc-----CCCCcEEEec-CChHHHHHHHHHHHHHhcCCCEEEEEe
Confidence 45667777788887764443332221 1124456554 34444555555545443 766555433
No 276
>3nk6_A 23S rRNA methyltransferase; nosiheptide, nosiheptide-resistance methyltransferase, 23S R methyltransferase; 2.00A {Streptomyces actuosus} PDB: 3nk7_A* 3gyq_A*
Probab=22.64 E-value=1.2e+02 Score=24.75 Aligned_cols=74 Identities=12% Similarity=0.063 Sum_probs=44.9
Q ss_pred cccCCchHHHHHHHHHhccCceeeeccC-cc---ccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 31 QKLAHADGEVATARAAGMMDAIMILSLM-ST---TSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 31 ~~l~~~~gE~~~araA~~~g~~~~lst~-ss---~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
.++-+|.-==++.|.|..+|+-.++=.- .+ .+-+ +..++-+...|..++.. | ..+.++..++.||.-+..+
T Consensus 125 d~v~dP~NlGaI~Rta~a~G~~~vil~~~~~~~~~~~~-v~ras~Ga~~~l~i~~~-~---l~~~l~~lk~~g~~v~~~~ 199 (277)
T 3nk6_A 125 DGVKIVGNIGAIVRTSLALGAAGIVLVDSDLATIADRR-LLRASRGYVFSLPVVLA-D---REEAVSFLRDNDIALMVLD 199 (277)
T ss_dssp ESCCCHHHHHHHHHHHHHTTCSEEEEESCCCSCTTCHH-HHHHTTTCTTTSCEEEC-C---HHHHHHHHHHTTCCEEEEC
T ss_pred EcCCCcchHHHHHHHHHHcCCCEEEEcCCCCcCCCCHH-HHHHhCChhhcCeEEEE-C---HHHHHHHHHhcCCeEEEEe
Confidence 3444443334888999999987655332 22 2333 43343344556666655 4 3456777788999988887
Q ss_pred ecc
Q psy13219 107 MDT 109 (193)
Q Consensus 107 VD~ 109 (193)
.+.
T Consensus 200 ~~~ 202 (277)
T 3nk6_A 200 TDG 202 (277)
T ss_dssp TTC
T ss_pred cCC
Confidence 764
No 277
>2ae6_A Acetyltransferase, GNAT family; GCN5-related N-acetyltransferase (GNAT), alpha-beta, structu genomics, PSI, protein structure initiative; HET: GOL; 2.19A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=22.64 E-value=64 Score=22.70 Aligned_cols=35 Identities=20% Similarity=0.215 Sum_probs=24.9
Q ss_pred EEEEEeecC---H----HHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 76 WLQMYIFKD---R----ALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 76 wfQlY~~~d---r----~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
.+.+|+..+ + .+...+++.|++.|++.|.++|...
T Consensus 84 ~~~l~V~p~~rg~GiG~~ll~~~~~~a~~~g~~~i~l~v~~~ 125 (166)
T 2ae6_A 84 LLSIGVSPDFQDQGIGGSLLSYIKDMAEISGIHKLSLRVMAT 125 (166)
T ss_dssp EEEEEECGGGTTSSHHHHHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred EEEEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEeecC
Confidence 346787553 2 3556666777788999999998764
No 278
>2fia_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 2.60A {Enterococcus faecalis} SCOP: d.108.1.1
Probab=22.62 E-value=65 Score=21.79 Aligned_cols=38 Identities=13% Similarity=-0.012 Sum_probs=23.6
Q ss_pred HHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCC
Q psy13219 86 ALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKF 123 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~ 123 (193)
.+...+++.|.+.|++.+.++++..-...+.-=.|.||
T Consensus 95 ~ll~~~~~~~~~~g~~~i~~~~~~~N~~a~~~y~k~Gf 132 (162)
T 2fia_A 95 LLFHELEKRAVWEGRRKMYAQTNHTNHRMIRFFESKGF 132 (162)
T ss_dssp HHHHHHHHHHHTTTCCEEEEEEETTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHHCCCCEEEEEecCCCHHHHHHHHHCCC
Confidence 45556667777789999999988542222222235565
No 279
>3fix_A N-acetyltransferase; termoplasma acidophilum, structural GEN PSI-2, protein structure initiative, midwest center for STR genomics, MCSG; 2.30A {Thermoplasma acidophilum} PDB: 3f0a_A* 3k9u_A* 3ne7_A*
Probab=22.48 E-value=64 Score=22.88 Aligned_cols=33 Identities=12% Similarity=0.280 Sum_probs=23.1
Q ss_pred EEEeecC---H----HHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 78 QMYIFKD---R----ALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 78 QlY~~~d---r----~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
.+|+..+ + .+...+++.|++.|++.+.++|+..
T Consensus 115 ~l~V~p~~rg~Gig~~Ll~~~~~~a~~~g~~~i~l~v~~~ 154 (183)
T 3fix_A 115 RLYLKPEYTHKKIGKTLLLEAEKIMKKKGILECRLYVHRQ 154 (183)
T ss_dssp EEEECGGGCCHHHHHHHHHHHHHHHHHHTCCEEEEEEETT
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHHcCCceEEEEEecC
Confidence 5666543 3 4555666777778999999999754
No 280
>1ufh_A YYCN protein; alpha and beta, fold, acetyltransferase, structural genomics, PSI, protein structure initiative; 2.20A {Bacillus subtilis subsp} SCOP: d.108.1.1
Probab=22.40 E-value=73 Score=22.37 Aligned_cols=39 Identities=13% Similarity=0.034 Sum_probs=24.9
Q ss_pred HHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCC
Q psy13219 86 ALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFT 124 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~ 124 (193)
++...+++.|++.|++.|.+.++.--...+.-=.|.||.
T Consensus 132 ~ll~~~~~~~~~~g~~~i~l~~~~~N~~a~~~y~k~GF~ 170 (180)
T 1ufh_A 132 QALAALDQAARSMGIRKLSLHVFAHNQTARKLYEQTGFQ 170 (180)
T ss_dssp HHHHHHHHHHHHTTCCEEEECCCTTCHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHCCCCEEEEEeccCcHHHHHHHHHCCCE
Confidence 455667777778899999999876432222222455663
No 281
>2i2w_A Phosphoheptose isomerase; lipopolysaccharide biosynthesis; 1.95A {Escherichia coli} PDB: 2i22_A 1x94_A
Probab=22.37 E-value=1.5e+02 Score=22.46 Aligned_cols=35 Identities=17% Similarity=0.218 Sum_probs=26.1
Q ss_pred ceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEeec
Q psy13219 74 TLWLQMYIFKDRALSLQMVQRAERSGYSAIVITMD 108 (193)
Q Consensus 74 ~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD 108 (193)
...+=+-..+.-..+.+.++.|++.|++.|.||-.
T Consensus 133 DvvI~iS~SG~t~~~i~~~~~ak~~G~~vIaIT~~ 167 (212)
T 2i2w_A 133 DVLLGISTSGNSANVIKAIAAAREKGMKVITLTGK 167 (212)
T ss_dssp CEEEEECSSSCCHHHHHHHHHHHHHTCEEEEEEET
T ss_pred CEEEEEECCCCCHHHHHHHHHHHHCCCeEEEEECC
Confidence 33443444555567788999999999999999975
No 282
>2bei_A Diamine acetyltransferase 2; SSAT2, BC011751, AAH11751, thialysine N-acetyltransferase, structural genomics, protein structure initiative, PSI; HET: ACO; 1.84A {Homo sapiens} SCOP: d.108.1.1 PDB: 2q4v_A*
Probab=22.32 E-value=91 Score=22.09 Aligned_cols=33 Identities=12% Similarity=0.235 Sum_probs=24.4
Q ss_pred EEEeecC-------HHHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 78 QMYIFKD-------RALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 78 QlY~~~d-------r~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
.||+..+ +.+++.+++.|++.|++.|.++|...
T Consensus 93 ~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~~ 132 (170)
T 2bei_A 93 DIYVMPEYRGQGIGSKIIKKVAEVALDKGCSQFRLAVLDW 132 (170)
T ss_dssp EEEECGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred EEEEChHhcCCCHHHHHHHHHHHHHHHCCCCEEEEEEecc
Confidence 4777554 35666777778889999999988753
No 283
>4af0_A Inosine-5'-monophosphate dehydrogenase; oxidoreductase, GTP biosynthesis, drug resistance; HET: MOA IMP; 2.20A {Cryptococcus neoformans} PDB: 4af0_B*
Probab=22.31 E-value=1.1e+02 Score=27.96 Aligned_cols=93 Identities=16% Similarity=0.140 Sum_probs=38.6
Q ss_pred CCCCCcceE-CCceeCCceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhhC------CCCceEE-
Q psy13219 6 CDRDSGLTV-LGTRYRCPVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQN------PSTTLWL- 77 (193)
Q Consensus 6 ~~~d~~t~~-lG~~~~~P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~------~~~~~wf- 77 (193)
+++|++|.+ =+.++..||+-|||- -. -|..+|-|-++.|=.-++ .-+.|+|+-++.. ..+ |.
T Consensus 77 ~~Vdl~t~lt~~i~L~iPlvSA~MD--TV----Te~~MAIamAr~GGiGvI--H~n~sie~Qa~~V~~VKr~e~g--~i~ 146 (556)
T 4af0_A 77 SDVSLQSKATKNIVLNTPFLSSPMD--TV----TEDRMAIALALHGGLGII--HHNCSAEEQAAMVRRVKKYENG--FIT 146 (556)
T ss_dssp GGCCCCEEEETTEEESSCEEECCCT--TT----CSHHHHHHHHHTTCEEEE--CCSSCHHHHHHHHHHHHHCCC------
T ss_pred ccceeeeeccCCcEeCCCEEecCcc--cc----cCHHHHHHHHHCCCeEEE--cCCCCHHHHHHHHHHHHhcccC--ccC
Confidence 478899988 478999999999962 22 355666666676655555 3456777655432 111 11
Q ss_pred -EEEeecCHHHHHHHHHHHHHcCCcEEEEeecc
Q psy13219 78 -QMYIFKDRALSLQMVQRAERSGYSAIVITMDT 109 (193)
Q Consensus 78 -QlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD~ 109 (193)
.+.+..|. ...+.++--++-|+.++.||-|.
T Consensus 147 dPvtl~P~~-Tv~da~~l~~~~~isgvpVvd~g 178 (556)
T 4af0_A 147 DPLCLGPDA-TVGDVLEIKAKFGFCGVPITETG 178 (556)
T ss_dssp ---------------------------------
T ss_pred CCeEcCCCC-CHHHHHHHHHHhCCCcccccccc
Confidence 12333332 23344555567788888888763
No 284
>1vrd_A Inosine-5'-monophosphate dehydrogenase; TM1347, structural G joint center for structural genomics, JCSG, protein structu initiative, PSI; 2.18A {Thermotoga maritima} SCOP: c.1.5.1
Probab=22.16 E-value=44 Score=29.37 Aligned_cols=21 Identities=14% Similarity=0.303 Sum_probs=18.8
Q ss_pred CHHHHHHHHhcC-CCCEEEecC
Q psy13219 172 DWDDVRSLVQAT-KLPIVCKGI 192 (193)
Q Consensus 172 tW~di~wlr~~~-~lPivlKGI 192 (193)
.|+.|+|+|+.+ +.|++++++
T Consensus 265 ~~e~i~~i~~~~p~~pvi~g~~ 286 (494)
T 1vrd_A 265 VIETLEMIKADYPDLPVVAGNV 286 (494)
T ss_dssp HHHHHHHHHHHCTTSCEEEEEE
T ss_pred HHHHHHHHHHHCCCceEEeCCc
Confidence 789999999999 699998875
No 285
>3mxt_A Pantothenate synthetase; alpha-beta-alpha, structural genomics, center for structural of infectious diseases, csgid, ligase; HET: MSE; 1.85A {Campylobacter jejuni subsp} SCOP: c.26.1.0 PDB: 3uy4_A*
Probab=22.05 E-value=1.2e+02 Score=25.32 Aligned_cols=69 Identities=22% Similarity=0.426 Sum_probs=42.1
Q ss_pred ceeecchhccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCc
Q psy13219 22 PVGIAPSAMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYS 101 (193)
Q Consensus 22 P~~iaP~g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~ 101 (193)
.|++=||-+ .| | +|.+.+.+.|++ +=..++|-+=+-. + -+++-. |.-| +++-+.-.++ ++++|+.
T Consensus 26 ~Ig~VPTMG-aL-H-~GHlsLv~~Ar~-~d~VVVSIFVNP~--Q---F~~~ED--l~~Y-PRtle~D~~l---l~~~gvD 90 (285)
T 3mxt_A 26 SIGYVPTMG-FL-H-DGHLSLVKHAKT-QDKVIVSIFVNPM--Q---FGPNED--FSSY-PRDLERDIKM---CQDNGVD 90 (285)
T ss_dssp CEEEEEECS-SC-C-HHHHHHHHHHTT-SSEEEEEECCCGG--G---CCTTSC--TTTS-CCCHHHHHHH---HHHTTCS
T ss_pred eEEEEcCCC-cc-c-HHHHHHHHHHHh-CCEEEEEeccCcc--c---cCCchh--hhcC-CCCHHHHHHH---HHHCCCC
Confidence 577778632 34 5 899999999999 7777888765432 1 111100 2335 4444443344 4788998
Q ss_pred EEEE
Q psy13219 102 AIVI 105 (193)
Q Consensus 102 Alvv 105 (193)
+++.
T Consensus 91 ~vF~ 94 (285)
T 3mxt_A 91 MVFI 94 (285)
T ss_dssp EEEC
T ss_pred EEEC
Confidence 7665
No 286
>3pp9_A Putative streptothricin acetyltransferase; toxin production resistance, infectious diseases, structural genomics; HET: MSE ACO; 1.60A {Bacillus anthracis}
Probab=22.04 E-value=74 Score=22.56 Aligned_cols=33 Identities=18% Similarity=0.230 Sum_probs=24.7
Q ss_pred EEEeecC-------HHHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 78 QMYIFKD-------RALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 78 QlY~~~d-------r~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
.+++..+ +.++..+++.|++.|++.+.++++..
T Consensus 105 ~~~v~~~~rg~Gig~~ll~~~~~~~~~~g~~~i~~~~~~~ 144 (187)
T 3pp9_A 105 DITVDKKYRTLGVGKRLIAQAKQWAKEGNMPGIMLETQNN 144 (187)
T ss_dssp EEEECGGGTTSSHHHHHHHHHHHHHHHTTCCEEEEEEETT
T ss_pred EEEECHHHhcCCHHHHHHHHHHHHHHHCCCCEEEEEEecC
Confidence 5676553 34666777888889999999999864
No 287
>2i6c_A Putative acetyltransferase; GNAT family, structural genomic, structur genomics, PSI-2, protein structure initiative; HET: MSE EPE; 1.30A {Pseudomonas aeruginosa} SCOP: d.108.1.1 PDB: 3pgp_A*
Probab=21.99 E-value=70 Score=21.63 Aligned_cols=38 Identities=13% Similarity=-0.112 Sum_probs=24.3
Q ss_pred HHHHHHHHHHHH-cCCcEEEEeeccCCCCCchhhhhcCC
Q psy13219 86 ALSLQMVQRAER-SGYSAIVITMDTAVLGSRYRDLKNKF 123 (193)
Q Consensus 86 ~~~~~ll~RAe~-AG~~AlvvTVD~pv~G~Re~d~r~~~ 123 (193)
.+...+++.|.+ .|++.+.++|+..-...+.-=.|.||
T Consensus 95 ~l~~~~~~~~~~~~g~~~i~l~~~~~n~~a~~~y~k~Gf 133 (160)
T 2i6c_A 95 YLIGVMENLAREQYKARLMKISCFNANAAGLLLYTQLGY 133 (160)
T ss_dssp HHHHHHHHHHHHHHCCSEEEEEEETTCHHHHHHHHHTTC
T ss_pred HHHHHHHHHHHhhCCccEEEEEEecCCHHHHHHHHHcCC
Confidence 455666777777 79999999988653222222234555
No 288
>1tiq_A Protease synthase and sporulation negative regulatory protein PAI 1; alpha-beta protein, structural genomics, PSI; HET: COA; 1.90A {Bacillus subtilis} SCOP: d.108.1.1
Probab=21.95 E-value=95 Score=22.17 Aligned_cols=32 Identities=16% Similarity=0.159 Sum_probs=24.1
Q ss_pred EEEeecC-------HHHHHHHHHHHHHcCCcEEEEeecc
Q psy13219 78 QMYIFKD-------RALSLQMVQRAERSGYSAIVITMDT 109 (193)
Q Consensus 78 QlY~~~d-------r~~~~~ll~RAe~AG~~AlvvTVD~ 109 (193)
.||+.++ +.++..+++.|++.|++.|.++|..
T Consensus 95 ~l~V~p~~rg~GiG~~Ll~~~~~~a~~~g~~~i~L~v~~ 133 (180)
T 1tiq_A 95 RIYIKNSFQKHGLGKHLLNKAIEIALERNKKNIWLGVWE 133 (180)
T ss_dssp EEEECGGGCSSSHHHHHHHHHHHHHHHTTCSEEEEEEET
T ss_pred EEEECHHHhCCCHHHHHHHHHHHHHHHCCCCEEEEEehh
Confidence 6888654 3456666777788899999999864
No 289
>1m3u_A 3-methyl-2-oxobutanoate hydroxymethyltransferase; beta-alpha-barrel, TIM-barrel, ketopantoate, selenomethionin decamer; HET: KPL; 1.80A {Escherichia coli} SCOP: c.1.12.8
Probab=21.95 E-value=2.6e+02 Score=22.83 Aligned_cols=26 Identities=15% Similarity=0.146 Sum_probs=20.7
Q ss_pred ecCHHHHHHHHHHHH---HcCCcEEEEee
Q psy13219 82 FKDRALSLQMVQRAE---RSGYSAIVITM 107 (193)
Q Consensus 82 ~~dr~~~~~ll~RAe---~AG~~AlvvTV 107 (193)
-++.+..+++++||+ +||+.+||+-.
T Consensus 154 grt~~~a~~~i~rA~a~~eAGA~~ivlE~ 182 (264)
T 1m3u_A 154 GRGDEAGDQLLSDALALEAAGAQLLVLEC 182 (264)
T ss_dssp CCSHHHHHHHHHHHHHHHHHTCCEEEEES
T ss_pred eCCHHHHHHHHHHHHHHHHCCCcEEEEec
Confidence 356666788999885 68999999965
No 290
>3n9r_A Fructose-bisphosphate aldolase; FBP aldolase, class II, inhibitor, lyase; HET: TD3; 1.80A {Helicobacter pylori} SCOP: c.1.10.0 PDB: 3c52_A* 3c56_A* 3c4u_A* 3n9s_A*
Probab=21.78 E-value=63 Score=27.22 Aligned_cols=24 Identities=21% Similarity=0.613 Sum_probs=21.6
Q ss_pred CCCCCHHHHHHHHhcCCCCEEEec
Q psy13219 168 DDSVDWDDVRSLVQATKLPIVCKG 191 (193)
Q Consensus 168 ~~~~tW~di~wlr~~~~lPivlKG 191 (193)
.|.+++|-|+.|++..+.|||+=|
T Consensus 188 ~p~Ld~~~L~~I~~~~~~PLVlHG 211 (307)
T 3n9r_A 188 EPKLDFERLQEVKRLTNIPLVLHG 211 (307)
T ss_dssp SCCCCHHHHHHHHHHHCSCEEESS
T ss_pred CCccCHHHHHHHHhcCCCCeEEeC
Confidence 478999999999988899999976
No 291
>2oh1_A Acetyltransferase, GNAT family; YP_013287.1, structural genom joint center for structural genomics, JCSG, protein structu initiative; HET: MSE UNL; 1.46A {Listeria monocytogenes str}
Probab=21.60 E-value=78 Score=21.99 Aligned_cols=33 Identities=3% Similarity=-0.034 Sum_probs=23.5
Q ss_pred EEEEeecC-------HHHHHHHHHHHHHcCCcEEEEeecc
Q psy13219 77 LQMYIFKD-------RALSLQMVQRAERSGYSAIVITMDT 109 (193)
Q Consensus 77 fQlY~~~d-------r~~~~~ll~RAe~AG~~AlvvTVD~ 109 (193)
..+|+..+ +.+...+++.|++.|++.|.+++..
T Consensus 107 ~~l~V~p~~rg~Gig~~ll~~~~~~a~~~g~~~i~l~~~~ 146 (179)
T 2oh1_A 107 HRIMVSRAFSGISLSKQMIYFAEKLGIEMSVPFIRLDCIE 146 (179)
T ss_dssp EEEEECGGGTTSCHHHHHHHHHHHHHHHTTCCEEEEEEET
T ss_pred EEEEECHHHcCCCHHHHHHHHHHHHHHHcCCCEEEEEecC
Confidence 45566553 3566677777778899999998874
No 292
>1h3d_A ATP-phosphoribosyltransferase; hisitidine biosynthesis, glycosyltransferase; HET: AMP TLA; 2.7A {Escherichia coli} SCOP: c.94.1.1 d.58.5.3 PDB: 1q1k_A*
Probab=21.57 E-value=57 Score=27.37 Aligned_cols=58 Identities=21% Similarity=0.273 Sum_probs=41.9
Q ss_pred cCceeeeccCccccHHHHHhhCCC-----------CceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 49 MDAIMILSLMSTTSLEEVRAQNPS-----------TTLWLQMYIFKDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 49 ~g~~~~lst~ss~s~eei~~~~~~-----------~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
.+-.|+.=+.....+|+|.+..|+ ...|+-+...-++....+++.+-+++|+++|+++
T Consensus 224 ~~~~~~~~n~p~~~l~~v~~~lPg~~~PTVs~l~~~~~wvAV~~vv~~~~~~~~~~~Lk~~GA~~Ilv~ 292 (299)
T 1h3d_A 224 RESKYIMMHAPTERLDEVIALLPGAERPTILPLAGDQQRVAMHMVSSETLFWETMEKLKALGASSILVL 292 (299)
T ss_dssp HHCEEEECCCCTTTHHHHHHHSCCSSCCCBCCCC-------BEEEESSCCCHHHHHHHHHTTCCSCEEE
T ss_pred hceeEEEEeCCHHHHHHHHHhcCCCCCCccccccCCCCEEEEEEEEcHHHHHHHHHHHHHcCCCeEEEe
Confidence 344666666777889999877541 1238888888888889999999999999999886
No 293
>1tv5_A Dhodehase, dihydroorotate dehydrogenase homolog, mitochondri, dihydroorotate; alpha-beta barrel, TIM barrel, oxidoreductase; HET: A26 FMN ORO N8E; 2.40A {Plasmodium falciparum} SCOP: c.1.4.1
Probab=21.53 E-value=1.2e+02 Score=26.76 Aligned_cols=36 Identities=3% Similarity=0.105 Sum_probs=27.5
Q ss_pred Cc-eEEEEEeecCHHHHHHHHHHHHHcCCcEEEEeec
Q psy13219 73 TT-LWLQMYIFKDRALSLQMVQRAERSGYSAIVITMD 108 (193)
Q Consensus 73 ~~-~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvTVD 108 (193)
-+ .+.-+-..-+.+...++.++++++|+.+|+++-=
T Consensus 297 ~P~V~vKispd~~~ed~~~iA~~~~~aGaDgI~v~nt 333 (443)
T 1tv5_A 297 KPLVFVKLAPDLNQEQKKEIADVLLETNIDGMIISNT 333 (443)
T ss_dssp CCEEEEEECSCCCHHHHHHHHHHHHHTTCSEEEECCC
T ss_pred CCeEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEECC
Confidence 35 5666655556667888999999999999998753
No 294
>3tml_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease; 1.90A {Burkholderia cenocepacia} PDB: 3t4c_A
Probab=21.51 E-value=1.3e+02 Score=25.01 Aligned_cols=41 Identities=12% Similarity=0.190 Sum_probs=27.9
Q ss_pred hccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhh
Q psy13219 29 AMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQ 69 (193)
Q Consensus 29 g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~ 69 (193)
+++++.-.+|=..+.+.|.+.|++++..-+...+++.+.+.
T Consensus 67 sf~Glg~~~GL~~L~~~~~e~Glp~~tev~d~~~v~~l~~~ 107 (288)
T 3tml_A 67 SFRGLGMDEGLRILSEVKRQLGLPVLTDVHSIDEIEQVASV 107 (288)
T ss_dssp -----CHHHHHHHHHHHHHHHCCCEEEECCSGGGHHHHHHH
T ss_pred CcCCcCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHHh
Confidence 45555213455678899999999999988888888877654
No 295
>1eye_A DHPS 1, dihydropteroate synthase I; alpha-beta barrel, transferase; HET: PMM; 1.70A {Mycobacterium tuberculosis H37RV} SCOP: c.1.21.1
Probab=21.33 E-value=80 Score=26.02 Aligned_cols=23 Identities=30% Similarity=0.281 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHHHcCCc--EEEEee
Q psy13219 85 RALSLQMVQRAERSGYS--AIVITM 107 (193)
Q Consensus 85 r~~~~~ll~RAe~AG~~--AlvvTV 107 (193)
.+...+.+++|+++|++ -|++.-
T Consensus 154 ~~~l~~~i~~a~~~Gi~~~~IilDP 178 (280)
T 1eye_A 154 RADLLASVADAVAAGVDPARLVLDP 178 (280)
T ss_dssp HHHHHHHHHHHHHTTCCGGGEEEEC
T ss_pred HHHHHHHHHHHHHcCCChhhEEEEC
Confidence 56677889999999998 677764
No 296
>3hgj_A Chromate reductase; TIM barrel, oxidoreductase; HET: FMN; 2.00A {Thermus scotoductus} SCOP: c.1.4.0 PDB: 3hf3_A*
Probab=21.31 E-value=3.5e+02 Score=22.40 Aligned_cols=44 Identities=16% Similarity=0.201 Sum_probs=28.0
Q ss_pred HHHHhhCC-CCceEEEEEee------cCHHHHHHHHHHHHHcCCcEEEEee
Q psy13219 64 EEVRAQNP-STTLWLQMYIF------KDRALSLQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 64 eei~~~~~-~~~~wfQlY~~------~dr~~~~~ll~RAe~AG~~AlvvTV 107 (193)
++|.++.+ +-+.++=|-.. .+.+...+++++.+++|+..|-++.
T Consensus 210 ~aVR~avG~d~pV~vRls~~~~~~~g~~~~~~~~la~~L~~~Gvd~i~vs~ 260 (349)
T 3hgj_A 210 QAVREVVPRELPLFVRVSATDWGEGGWSLEDTLAFARRLKELGVDLLDCSS 260 (349)
T ss_dssp HHHHHHSCTTSCEEEEEESCCCSTTSCCHHHHHHHHHHHHHTTCCEEEEEC
T ss_pred HHHHHHhcCCceEEEEeccccccCCCCCHHHHHHHHHHHHHcCCCEEEEec
Confidence 34445544 33455544432 2456778899999999998877764
No 297
>2nv1_A Pyridoxal biosynthesis lyase PDXS; (beta/alpha)8-barrel, synthase; 2.08A {Bacillus subtilis} PDB: 2nv2_A* 1znn_A
Probab=21.20 E-value=2e+02 Score=23.27 Aligned_cols=17 Identities=24% Similarity=0.376 Sum_probs=14.3
Q ss_pred HHHHHHHHcCCcEE-EEe
Q psy13219 90 QMVQRAERSGYSAI-VIT 106 (193)
Q Consensus 90 ~ll~RAe~AG~~Al-vvT 106 (193)
+++++++++|+++| +++
T Consensus 32 ~~a~~~~~~Ga~~I~~l~ 49 (305)
T 2nv1_A 32 EQAKIAEEAGAVAVMALE 49 (305)
T ss_dssp HHHHHHHHTTCSEEEECC
T ss_pred HHHHHHHHcCCCEEEEcC
Confidence 57888899999999 665
No 298
>3fs2_A 2-dehydro-3-deoxyphosphooctonate aldolase; ssgcid, bruciellla melitensis, DAHP synthetase I, cytoplasm, lipopolysaccharide biosynthesis; HET: PG4; 1.85A {Brucella melitensis}
Probab=21.15 E-value=97 Score=25.94 Aligned_cols=47 Identities=9% Similarity=-0.011 Sum_probs=30.6
Q ss_pred hccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEE
Q psy13219 29 AMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQM 79 (193)
Q Consensus 29 g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQl 79 (193)
+++++.-.+|=..+.+.|.+.|+++...-+...+++.+.+. .-|+|+
T Consensus 91 sf~Glg~~~GL~~L~~~~~e~GLpv~Tev~D~~~v~~l~~~----vd~lkI 137 (298)
T 3fs2_A 91 AARGIGLEKALEVFSDLKKEYGFPVLTDIHTEEQCAAVAPV----VDVLQI 137 (298)
T ss_dssp ----CCHHHHHHHHHHHHHHHCCCEEEECCSHHHHHHHTTT----CSEEEE
T ss_pred CcCCcCHHHHHHHHHHHHHhcCCeEEEEeCCHHHHHHHHhh----CCEEEE
Confidence 45555213455678899999999999888888888777543 235665
No 299
>1on0_A YYCN protein; structural genomics, alpha-beta protein with anti-parallel B strands, PSI, protein structure initiative; 2.20A {Bacillus subtilis} SCOP: d.108.1.1
Probab=21.12 E-value=72 Score=22.30 Aligned_cols=48 Identities=10% Similarity=0.095 Sum_probs=30.8
Q ss_pred EEEEeecC-------HHHHHHHHHHHHHcCCcEEEEeeccCCCCCchhhhhcCCC
Q psy13219 77 LQMYIFKD-------RALSLQMVQRAERSGYSAIVITMDTAVLGSRYRDLKNKFT 124 (193)
Q Consensus 77 fQlY~~~d-------r~~~~~ll~RAe~AG~~AlvvTVD~pv~G~Re~d~r~~~~ 124 (193)
..+|+.++ ++++..+++.|++.|++.|.++|..--..-+.==.|.||.
T Consensus 92 ~~~~v~~~~rg~G~g~~ll~~~~~~a~~~g~~~i~l~v~~~N~~a~~~Y~k~GF~ 146 (158)
T 1on0_A 92 YDFGLYEPYRGKGYAKQALAALDQAARSMGIRKLSLHVFAHNQTARKLYEQTGFQ 146 (158)
T ss_dssp EEEEECGGGCSSSHHHHHHHHHHHHHHHHTCCEEEECCCTTCHHHHHHHHHTTCC
T ss_pred EEEEEChhhcCCCHHHHHHHHHHHHHHHCCCCEEEEEEecCCHHHHHHHHHCCCE
Confidence 35677554 3566777888888899999999986432222222355663
No 300
>1wdi_A Hypothetical protein TT0907; structural genomics, riken structural genomics/proteomics initiative, RSGI, unknown function; HET: CIT; 2.10A {Thermus thermophilus} SCOP: e.53.1.1
Probab=21.09 E-value=1.1e+02 Score=26.18 Aligned_cols=46 Identities=9% Similarity=0.042 Sum_probs=28.4
Q ss_pred eeccCccccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 54 ILSLMSTTSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 54 ~lst~ss~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
.++|+-... |+|.+..- -.-||.+ .+.+.+.|.+|++.|-+.|.|.
T Consensus 212 G~GTF~PV~-e~i~~H~M-HsE~~~V-----~~~ta~~in~aka~G~RViAVG 257 (345)
T 1wdi_A 212 GPGTFRPVK-GDPEKHEM-HAEPYAI-----PEEVAEAVNRAKAEGRRVVAVG 257 (345)
T ss_dssp SGGGCCC----------C-CCEEEEE-----CHHHHHHHHHHHHTTCCEEEES
T ss_pred cCCCCcccc-cchhcCCc-cceEEEE-----CHHHHHHHHHHHHcCCeEEEEe
Confidence 356766666 88887743 3568877 4778899999999999988774
No 301
>3i45_A Twin-arginine translocation pathway signal protei; structural genomics; 1.36A {Rhodospirillum rubrum}
Probab=21.06 E-value=1.1e+02 Score=24.96 Aligned_cols=18 Identities=17% Similarity=0.134 Sum_probs=13.0
Q ss_pred HHHHHHHhccCceeeecc
Q psy13219 40 VATARAAGMMDAIMILSL 57 (193)
Q Consensus 40 ~~~araA~~~g~~~~lst 57 (193)
.+++..|.+.++|++..+
T Consensus 87 ~a~~~~~~~~~ip~i~~~ 104 (387)
T 3i45_A 87 LAVSDFARQRKVLFMASE 104 (387)
T ss_dssp HHHHHHHHHHTCCEEECS
T ss_pred HHHHHHHHHcCceEEecC
Confidence 466777778888887644
No 302
>2x7b_A N-acetyltransferase SSO0209; HET: COA; 1.95A {Sulfolobus solfataricus}
Probab=21.04 E-value=81 Score=22.23 Aligned_cols=34 Identities=6% Similarity=0.196 Sum_probs=25.1
Q ss_pred EEEEeecC-------HHHHHHHHHHHHHc-CCcEEEEeeccC
Q psy13219 77 LQMYIFKD-------RALSLQMVQRAERS-GYSAIVITMDTA 110 (193)
Q Consensus 77 fQlY~~~d-------r~~~~~ll~RAe~A-G~~AlvvTVD~p 110 (193)
..+|+..+ +++.+.+++.|++. |++.|.++|+.-
T Consensus 91 ~~l~V~p~~rg~GiG~~Ll~~~~~~a~~~~g~~~i~l~v~~~ 132 (168)
T 2x7b_A 91 VSIAVLEEYRRKGIATTLLEASMKSMKNDYNAEEIYLEVRVS 132 (168)
T ss_dssp EEEEECGGGTTSSHHHHHHHHHHHHHHHTTCCSEEEEEEETT
T ss_pred EEEEECHHHhccCHHHHHHHHHHHHHHHhcCeeEEEEEEEeC
Confidence 45676554 35667777888888 999999999754
No 303
>1viz_A PCRB protein homolog; structural genomics, unknown function; 1.85A {Bacillus subtilis} SCOP: c.1.4.1
Probab=21.01 E-value=55 Score=26.41 Aligned_cols=25 Identities=20% Similarity=0.239 Sum_probs=20.7
Q ss_pred cCHHHHHHHHHHHHHcCCcEEEEee
Q psy13219 83 KDRALSLQMVQRAERSGYSAIVITM 107 (193)
Q Consensus 83 ~dr~~~~~ll~RAe~AG~~AlvvTV 107 (193)
.|.+.+.+.++...++|+.+|.+-+
T Consensus 17 P~~~~t~~~~~~l~~~GaD~ielG~ 41 (240)
T 1viz_A 17 PNKDLPDEQLEILCESGTDAVIIGG 41 (240)
T ss_dssp TTSCCCHHHHHHHHTSCCSEEEECC
T ss_pred CCccccHHHHHHHHHcCCCEEEECC
Confidence 3445677888999999999999988
No 304
>3mog_A Probable 3-hydroxybutyryl-COA dehydrogenase; structural genomics, PSI, protein structure initiative, NYSG oxidoreductase; 2.20A {Escherichia coli}
Probab=20.98 E-value=2.4e+02 Score=24.78 Aligned_cols=55 Identities=11% Similarity=0.025 Sum_probs=36.4
Q ss_pred eccCccccHHHHHhhCCCCceEEEEEe-------------ec---CHHHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 55 LSLMSTTSLEEVRAQNPSTTLWLQMYI-------------FK---DRALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 55 lst~ss~s~eei~~~~~~~~~wfQlY~-------------~~---dr~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
.|+.|+.++++|++......++.-+++ .. +.+..+.+.+-+++.|-+.+++. |+|
T Consensus 117 asntSti~i~~ia~~~~~p~~~ig~hf~~Pa~v~~Lvevv~g~~Ts~e~~~~~~~l~~~lGk~~v~v~-d~~ 187 (483)
T 3mog_A 117 TTNTSSISITAIAAEIKNPERVAGLHFFNPAPVMKLVEVVSGLATAAEVVEQLCELTLSWGKQPVRCH-STP 187 (483)
T ss_dssp EECCSSSCHHHHTTTSSSGGGEEEEEECSSTTTCCEEEEEECSSCCHHHHHHHHHHHHHTTCEEEEEE-SCT
T ss_pred EecCCCCCHHHHHHHccCccceEEeeecChhhhCCeEEEecCCCCCHHHHHHHHHHHHHhCCEEEEEe-ccC
Confidence 477788899999876532122222222 22 67777777777888998888886 776
No 305
>2nwr_A 2-dehydro-3-deoxyphosphooctonate aldolase; KDO, KDO8P, KDO8PS, PEP, A5P, transferase; HET: PEP; 1.50A {Aquifex aeolicus} PDB: 2nws_A* 2nx1_A* 3e0i_A* 1fwn_A* 1fwt_A* 1fws_A* 1fx6_A 1fww_A 1fxq_A* 1fy6_A* 1jcx_A* 1jcy_A* 1pck_A* 1pcw_A* 1fxp_A* 2a21_A* 2a2i_A* 1pe1_A* 3e12_A* 2nx3_A* ...
Probab=20.98 E-value=1.5e+02 Score=24.17 Aligned_cols=48 Identities=10% Similarity=0.019 Sum_probs=34.8
Q ss_pred hccccCCchHHHHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEEE
Q psy13219 29 AMQKLAHADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMY 80 (193)
Q Consensus 29 g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY 80 (193)
++.++.-.+|=..+.+.+.+.|++++..-+...+++.+++. .-|+|+=
T Consensus 54 sf~G~g~~~GL~~l~~~~~e~Glp~~te~~d~~~~~~l~~~----vd~~~Ig 101 (267)
T 2nwr_A 54 SFRGHGLEYGVKALRKVKEEFGLKITTDIHESWQAEPVAEV----ADIIQIP 101 (267)
T ss_dssp SCCCSCHHHHHHHHHHHHHHHCCEEEEECSSGGGHHHHHTT----CSEEEEC
T ss_pred CCcCccHHHHHHHHHHHHHhcCCeEEEecCCHHhHHHHHhc----CCEEEEC
Confidence 34554223555678888899999999999999999988763 2467763
No 306
>3tt2_A GCN5-related N-acetyltransferase; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, alpha-beta sandwich; HET: MES; 2.73A {Sphaerobacter thermophilus}
Probab=20.97 E-value=1e+02 Score=24.03 Aligned_cols=39 Identities=15% Similarity=0.144 Sum_probs=27.6
Q ss_pred HHHHHHHHHHHHHcCCcEEEEeeccCC-CCCchhhhhcCC
Q psy13219 85 RALSLQMVQRAERSGYSAIVITMDTAV-LGSRYRDLKNKF 123 (193)
Q Consensus 85 r~~~~~ll~RAe~AG~~AlvvTVD~pv-~G~Re~d~r~~~ 123 (193)
+.+...+++.+.+.|++.+.+.||..- ..-+.-=.|.||
T Consensus 265 ~~Ll~~~~~~~~~~g~~~i~l~v~~~n~~~a~~~y~~~GF 304 (330)
T 3tt2_A 265 LALLQEVFGVYYRRGVREVELSVDAESRTGAPRLYRRAGM 304 (330)
T ss_dssp HHHHHHHHHHHHHHTCCEEEEEEEEETTTCSCHHHHHTTC
T ss_pred HHHHHHHHHHHHHcCCCeEEEEEecCCChhHHHHHHHcCC
Confidence 456777888888899999999998754 333333345566
No 307
>1o60_A 2-dehydro-3-deoxyphosphooctonate aldolase; structural genomics, transferase; 1.80A {Haemophilus influenzae} SCOP: c.1.10.4 PDB: 3e9a_A
Probab=20.59 E-value=1.7e+02 Score=24.10 Aligned_cols=61 Identities=11% Similarity=0.104 Sum_probs=42.0
Q ss_pred chHHHHHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcE
Q psy13219 36 ADGEVATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSA 102 (193)
Q Consensus 36 ~~gE~~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~A 102 (193)
.+|-..+.+.|.+.|++++.+-+...+++.+++. .-|+|+=-..= .+.+|++.+.+.|..-
T Consensus 75 ~~gl~~l~~~~~~~Glp~~te~~d~~~~~~l~~~----vd~~kIgA~~~--~n~~Ll~~~a~~~kPV 135 (292)
T 1o60_A 75 EEGLKIFQELKDTFGVKIITDVHEIYQCQPVADV----VDIIQLPAFLA--RQTDLVEAMAKTGAVI 135 (292)
T ss_dssp HHHHHHHHHHHHHHCCEEEEECCSGGGHHHHHTT----CSEEEECGGGT--TCHHHHHHHHHTTCEE
T ss_pred HHHHHHHHHHHHHcCCcEEEecCCHHHHHHHHhc----CCEEEECcccc--cCHHHHHHHHcCCCcE
Confidence 4566678888999999999999999999988763 35888842111 1223666665555433
No 308
>1v2x_A TRNA (GM18) methyltransferase; DEEP trefoil knot, riken structural genomics/proteomics INIT RSGI, structural genomics; HET: SAM; 1.50A {Thermus thermophilus} SCOP: c.116.1.1
Probab=20.58 E-value=45 Score=25.68 Aligned_cols=63 Identities=10% Similarity=0.217 Sum_probs=0.0
Q ss_pred HHHHHHhccCceeeeccCccccHHHHHhhCCCCceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 41 ATARAAGMMDAIMILSLMSTTSLEEVRAQNPSTTLWLQMYIFKDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 41 ~~araA~~~g~~~~lst~ss~s~eei~~~~~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
+++|.|..+|+--++=...+...+.+..++.+...|..++...|-+ +.++..++.||.-+..+
T Consensus 38 aI~Rta~a~G~~~v~l~~~~~~~~~~~r~s~Ga~~~l~~~~~~~l~---~~l~~l~~~g~~i~~~~ 100 (194)
T 1v2x_A 38 AILRTCDAVGVLEAHAVNPTGGVPTFNETSGGSHKWVYLRVHPDLH---EAFRFLKERGFTVYATA 100 (194)
T ss_dssp HHHHHHHHHTBSEEEEESGGGGSCCCCSSCSSGGGTSEEEEESSHH---HHHHHHHHTTCEEEEEC
T ss_pred HHHHHHHHhCCCEEEEeCCCCCchhhHHHCCCChheeeeEecCCHH---HHHHHHHHCCCEEEEEe
No 309
>1xx6_A Thymidine kinase; NESG, northeast structural genomics consortium, protein STRU initiative, PSI, structural genomics, DNA synthesis; HET: ADP; 2.00A {Clostridium acetobutylicum} SCOP: c.37.1.24 g.39.1.14
Probab=20.56 E-value=99 Score=23.60 Aligned_cols=35 Identities=14% Similarity=0.242 Sum_probs=23.2
Q ss_pred eEEEEEeec-CHHHHHHHHHHHH---HcCCcEEEEe--ecc
Q psy13219 75 LWLQMYIFK-DRALSLQMVQRAE---RSGYSAIVIT--MDT 109 (193)
Q Consensus 75 ~wfQlY~~~-dr~~~~~ll~RAe---~AG~~AlvvT--VD~ 109 (193)
.|+++|.-. .-+.|..++++|. .+|.+.++++ .|.
T Consensus 8 g~i~v~~G~mgsGKTT~ll~~a~r~~~~g~kV~v~k~~~d~ 48 (191)
T 1xx6_A 8 GWVEVIVGPMYSGKSEELIRRIRRAKIAKQKIQVFKPEIDN 48 (191)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHTTCCEEEEEEC---
T ss_pred CEEEEEECCCCCcHHHHHHHHHHHHHHCCCEEEEEEeccCc
Confidence 467777654 6677776666554 5699999997 554
No 310
>1nqk_A Alkanesulfonate monooxygenase; structural genomics, beta barrel, PSI, protein structure INI midwest center for structural genomics, MCSG; 2.20A {Escherichia coli} SCOP: c.1.16.4 PDB: 1m41_A
Probab=20.52 E-value=76 Score=26.81 Aligned_cols=24 Identities=33% Similarity=0.569 Sum_probs=21.4
Q ss_pred cCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 83 KDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 83 ~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
.+-+...++.++||++||..+++.
T Consensus 27 ~~~~~~~~~a~~AE~~Gfd~~w~~ 50 (381)
T 1nqk_A 27 VDHGYLQQIAQAADRLGYTGVLIP 50 (381)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEC
T ss_pred CCHHHHHHHHHHHHHCCCCEEEec
Confidence 467788899999999999999986
No 311
>3c8f_A Pyruvate formate-lyase 1-activating enzyme; adoMet radical, SAM radical, activase, glycyl radical, 4Fe- 4S, carbohydrate metabolism, cytoplasm; HET: MT2 PGE; 2.25A {Escherichia coli} PDB: 3cb8_A*
Probab=20.48 E-value=2.7e+02 Score=20.72 Aligned_cols=72 Identities=10% Similarity=0.008 Sum_probs=42.0
Q ss_pred hccccCCchHHHHHHHHHhccCceeeeccCccc--c---HHHHHhhCCCCceEEEEEeec-CH-----------HHHHHH
Q psy13219 29 AMQKLAHADGEVATARAAGMMDAIMILSLMSTT--S---LEEVRAQNPSTTLWLQMYIFK-DR-----------ALSLQM 91 (193)
Q Consensus 29 g~~~l~~~~gE~~~araA~~~g~~~~lst~ss~--s---~eei~~~~~~~~~wfQlY~~~-dr-----------~~~~~l 91 (193)
|+--+.|++-=..+.+.+.+.|+...+.|.++. . ++++.+. ...+++-+.. |+ +...+.
T Consensus 77 GGEP~l~~~~l~~l~~~~~~~~~~i~i~Tng~~~~~~~~~~~l~~~----~~~v~isld~~~~~~~~~~~~~~~~~~~~~ 152 (245)
T 3c8f_A 77 GGEAILQAEFVRDWFRACKKEGIHTCLDTNGFVRRYDPVIDELLEV----TDLVMLDLKQMNDEIHQNLVGVSNHRTLEF 152 (245)
T ss_dssp ESCGGGGHHHHHHHHHHHHTTTCCEEEEECCCCCCCCHHHHHHHHT----CSEEEEECCCSSHHHHHHHHSSCSHHHHHH
T ss_pred CCCcCCCHHHHHHHHHHHHHcCCcEEEEeCCCcCcCHHHHHHHHHh----CCEEEEeCCCCCHHHhhhccCCCHHHHHHH
Confidence 444455654224677777888888878776644 3 3444443 1245555544 33 334566
Q ss_pred HHHHHHcCCcEEE
Q psy13219 92 VQRAERSGYSAIV 104 (193)
Q Consensus 92 l~RAe~AG~~Alv 104 (193)
++++.++|.+..+
T Consensus 153 i~~l~~~g~~v~i 165 (245)
T 3c8f_A 153 AKYLANKNVKVWI 165 (245)
T ss_dssp HHHHHHHTCCEEE
T ss_pred HHHHHhcCCEEEE
Confidence 7788888986433
No 312
>4f3y_A DHPR, dihydrodipicolinate reductase; structural genomics, niaid, national institute of allergy AN infectious diseases; 2.10A {Burkholderia thailandensis}
Probab=20.38 E-value=1.5e+02 Score=24.09 Aligned_cols=70 Identities=16% Similarity=0.315 Sum_probs=44.4
Q ss_pred cCCchHHHHHHHHHhccCceeeeccCccc--cHHHHHhhCCCCceEEEEEeec-C--HHHHHHHHHHHHH---cCCcEEE
Q psy13219 33 LAHADGEVATARAAGMMDAIMILSLMSTT--SLEEVRAQNPSTTLWLQMYIFK-D--RALSLQMVQRAER---SGYSAIV 104 (193)
Q Consensus 33 l~~~~gE~~~araA~~~g~~~~lst~ss~--s~eei~~~~~~~~~wfQlY~~~-d--r~~~~~ll~RAe~---AG~~Alv 104 (193)
+.+|+.-...++.|.+.|++++++|.+-. -+++|.+++...+. +|-++ . -.+..++++.|.+ -+|..=+
T Consensus 80 fT~p~a~~~~~~~al~~G~~vVigTTG~s~~~~~~L~~aa~~~~v---v~a~N~s~Gv~l~~~~~~~aa~~l~~~~diei 156 (272)
T 4f3y_A 80 FTLPEGTLVHLDAALRHDVKLVIGTTGFSEPQKAQLRAAGEKIAL---VFSANMSVGVNVTMKLLEFAAKQFAQGYDIEI 156 (272)
T ss_dssp CSCHHHHHHHHHHHHHHTCEEEECCCCCCHHHHHHHHHHTTTSEE---EECSCCCHHHHHHHHHHHHHHHHTSSSCEEEE
T ss_pred cCCHHHHHHHHHHHHHcCCCEEEECCCCCHHHHHHHHHHhccCCE---EEECCCCHHHHHHHHHHHHHHHhcCcCCCEEE
Confidence 45677778899999999999999886522 24566666544332 34333 2 2455677777765 2465555
Q ss_pred E
Q psy13219 105 I 105 (193)
Q Consensus 105 v 105 (193)
+
T Consensus 157 ~ 157 (272)
T 4f3y_A 157 I 157 (272)
T ss_dssp E
T ss_pred E
Confidence 5
No 313
>1ydn_A Hydroxymethylglutaryl-COA lyase; TIM-barrel protein, structural genomics, PSI, protein struct initiative; 2.30A {Brucella melitensis}
Probab=20.37 E-value=1.8e+02 Score=23.49 Aligned_cols=28 Identities=11% Similarity=0.052 Sum_probs=24.3
Q ss_pred cCHHHHHHHHHHHHHcCCcEEEEeeccCC
Q psy13219 83 KDRALSLQMVQRAERSGYSAIVITMDTAV 111 (193)
Q Consensus 83 ~dr~~~~~ll~RAe~AG~~AlvvTVD~pv 111 (193)
.|.+...+++++++++|+..|.+- |+--
T Consensus 152 ~~~~~~~~~~~~~~~~G~d~i~l~-Dt~G 179 (295)
T 1ydn_A 152 VTPQAVASVTEQLFSLGCHEVSLG-DTIG 179 (295)
T ss_dssp CCHHHHHHHHHHHHHHTCSEEEEE-ETTS
T ss_pred CCHHHHHHHHHHHHhcCCCEEEec-CCCC
Confidence 488999999999999999999987 7543
No 314
>3zwt_A Dihydroorotate dehydrogenase (quinone), mitochond; oxidoreductase; HET: FMN ORO KFZ; 1.55A {Homo sapiens} PDB: 1d3h_A* 2bxv_A* 2prh_A* 2prl_A* 2prm_A* 3f1q_A* 3fj6_A* 3fjl_A* 3g0u_A* 3g0x_A* 3zws_A* 1d3g_A* 3u2o_A* 2fpv_A* 2fpt_A* 2fpy_A* 2fqi_A* 3kvl_A* 3kvk_A* 3kvj_A* ...
Probab=20.30 E-value=1.2e+02 Score=25.82 Aligned_cols=34 Identities=6% Similarity=0.089 Sum_probs=26.9
Q ss_pred CceEEEEEeecCHHHHHHHHHHHHHcCCcEEEEe
Q psy13219 73 TTLWLQMYIFKDRALSLQMVQRAERSGYSAIVIT 106 (193)
Q Consensus 73 ~~~wfQlY~~~dr~~~~~ll~RAe~AG~~AlvvT 106 (193)
-|.+.=+-+.-|.+.+.++.+.++++|+.+|+++
T Consensus 221 ~Pv~vKi~p~~~~~~~~~ia~~~~~aGadgi~v~ 254 (367)
T 3zwt_A 221 PAVLVKIAPDLTSQDKEDIASVVKELGIDGLIVT 254 (367)
T ss_dssp CEEEEEECSCCCHHHHHHHHHHHHHHTCCEEEEC
T ss_pred ceEEEEeCCCCCHHHHHHHHHHHHHcCCCEEEEe
Confidence 4666666555567778899999999999999886
No 315
>3jx9_A Putative phosphoheptose isomerase; YP_001815198.1, structura genomics, joint center for structural genomics, JCSG; HET: MSE; 1.95A {Exiguobacterium sibiricum 255-15}
Probab=20.30 E-value=2.8e+02 Score=20.88 Aligned_cols=83 Identities=14% Similarity=-0.004 Sum_probs=53.2
Q ss_pred HHHHHHHhccCceeeeccCccccHHH-HHhhC---------------CCCceEEEEEeecCHHHHHHHHHHHHHcCCcEE
Q psy13219 40 VATARAAGMMDAIMILSLMSTTSLEE-VRAQN---------------PSTTLWLQMYIFKDRALSLQMVQRAERSGYSAI 103 (193)
Q Consensus 40 ~~~araA~~~g~~~~lst~ss~s~ee-i~~~~---------------~~~~~wfQlY~~~dr~~~~~ll~RAe~AG~~Al 103 (193)
..+|+|...-|+.|+.++.-+.-+++ +.... ..+.+.+=+..+.......++..+|++.|.+.+
T Consensus 29 ~llaqai~~~g~IyvfG~Ghs~~~~~e~~~~~e~l~~~~~~~~~~~i~~~D~vii~S~Sg~n~~~ie~A~~ake~G~~vI 108 (170)
T 3jx9_A 29 RLLAQALVGQGKVYLDAYGEFEGLYPMLSDGPDQMKRVTKIKDHKTLHAVDRVLIFTPDTERSDLLASLARYDAWHTPYS 108 (170)
T ss_dssp HHHHHHHHTTCCEEEEECGGGGGGTHHHHTSTTCCTTEEECCTTCCCCTTCEEEEEESCSCCHHHHHHHHHHHHHTCCEE
T ss_pred HHHHHHHhCCCEEEEECCCcHHHHHHHHHcccCCccchhhhhhcCCCCCCCEEEEEeCCCCCHHHHHHHHHHHHCCCcEE
Confidence 45677777789999999876665433 32110 112334444555666778899999999999999
Q ss_pred EEeeccCC--CCCchhhhhcC
Q psy13219 104 VITMDTAV--LGSRYRDLKNK 122 (193)
Q Consensus 104 vvTVD~pv--~G~Re~d~r~~ 122 (193)
+||=.... .|++-.|+-|+
T Consensus 109 aITs~~~~~~~~~~L~d~an~ 129 (170)
T 3jx9_A 109 IITLGDVTETLERSIAPLALK 129 (170)
T ss_dssp EEESSCCCTTGGGSSSCEECC
T ss_pred EEeCcchhccccCcHHHHHhC
Confidence 99982221 13455555443
No 316
>2g3a_A Acetyltransferase; structural genomics, PSI, protein structu initiative, midwest center for structural genomics, MCSG; 1.90A {Agrobacterium tumefaciens str} SCOP: d.108.1.1
Probab=20.23 E-value=1.2e+02 Score=20.64 Aligned_cols=31 Identities=13% Similarity=0.146 Sum_probs=22.8
Q ss_pred EEEeecC-------HHHHHHHHHHHHHcCCcEEEEeec
Q psy13219 78 QMYIFKD-------RALSLQMVQRAERSGYSAIVITMD 108 (193)
Q Consensus 78 QlY~~~d-------r~~~~~ll~RAe~AG~~AlvvTVD 108 (193)
.+|+..+ ++++..+++.|++.|++.+.++++
T Consensus 80 ~~~v~p~~rg~Gig~~ll~~~~~~~~~~g~~~i~l~~~ 117 (152)
T 2g3a_A 80 LLFVPEAMRGQGIAPKLLAMAEEEARKRGCMGAYIDTM 117 (152)
T ss_dssp EEECCGGGCSSSHHHHHHHHHHHHHHHTTCCEEEEEES
T ss_pred EEEECHHHcCCCHHHHHHHHHHHHHHHCCCCEEEEEec
Confidence 5566443 356667777788889999999986
No 317
>2i7g_A Monooxygenase, AGR_C_4197P; alpha-beta, TIM barrel, helix-bundle, structural genomics, P protein structure initiative; HET: MSE; 1.73A {Agrobacterium tumefaciens str}
Probab=20.21 E-value=73 Score=26.79 Aligned_cols=24 Identities=13% Similarity=0.205 Sum_probs=19.5
Q ss_pred HHHHHHHHHHHHcCCcEEEEeeccC
Q psy13219 86 ALSLQMVQRAERSGYSAIVITMDTA 110 (193)
Q Consensus 86 ~~~~~ll~RAe~AG~~AlvvTVD~p 110 (193)
+...++.++||++||..+++. |..
T Consensus 49 ~~~~~~A~~AE~~Gfd~~w~~-eh~ 72 (376)
T 2i7g_A 49 RELLEEIELADQVGLDVFGLG-EHH 72 (376)
T ss_dssp HHHHHHHHHHHHTTCCEEEEC-CCC
T ss_pred HHHHHHHHHHHHcCCCEEEec-ccc
Confidence 456678999999999999985 543
Done!