BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1322
(231 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1S8O|A Chain A, Human Soluble Epoxide Hydrolase
pdb|1VJ5|A Chain A, Human Soluble Epoxide Hydrolase- N-Cyclohexyl-N'-(4-
Iodophenyl)urea Complex
pdb|1ZD2|P Chain P, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Ethanoic Acid Complex
pdb|1ZD3|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Butyric Acid Complex
pdb|1ZD4|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Hexanoic Acid Complex
pdb|1ZD5|A Chain A, Human Soluble Epoxide Hydrolase 4-(3-Cyclohexyluriedo)-
Heptanoic Acid Complex
pdb|3I1Y|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3I28|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3KOO|A Chain A, Crystal Structure Of Soluble Epoxide Hydrolase
pdb|3OTQ|A Chain A, Soluble Epoxide Hydrolase In Complex With Pyrazole
Antagonist
pdb|4HAI|A Chain A, Crystal Structure Of Human Soluble Epoxide Hydrolase
Complexed With N-
Cycloheptyl-1-(mesitylsulfonyl)piperidine-4-carboxamide
Length = 555
Score = 71.6 bits (174), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 75 VHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHE-YWTVAVDIKTNFRTIA---- 129
V +FV GS P + HGFPESWY W++Q+ + Y +A+D+K + A
Sbjct: 248 VRLHFVELGS--GPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEI 305
Query: 130 DRY---FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 182
+ Y L + FLD LG ++ + IG D+GG LVW YPE V +N P
Sbjct: 306 EEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTP 361
Score = 30.8 bits (68), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 8 NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 42
++ + IG D+GG LVW YPE V +N P
Sbjct: 327 SQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTP 361
>pdb|3PDC|A Chain A, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor
pdb|3PDC|B Chain B, Crystal Structure Of Hydrolase Domain Of Human Soluble
Epoxide Hydrolase Complexed With A Benzoxazole Inhibitor
Length = 344
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 75 VHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHE-YWTVAVDIKTNFRTIA---- 129
V +FV GS P + HGFPESWY W++Q+ + Y +A+D+K + A
Sbjct: 44 VRLHFVELGS--GPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEI 101
Query: 130 DRY---FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 182
+ Y L + FLD LG ++ + IG D+GG LVW YPE V +N P
Sbjct: 102 EEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTP 157
Score = 31.2 bits (69), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 8 NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 42
++ + IG D+GG LVW YPE V +N P
Sbjct: 123 SQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTP 157
>pdb|3ANS|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANS|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|A Chain A, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
pdb|3ANT|B Chain B, Human Soluble Epoxide Hydrolase In Complex With A
Synthetic Inhibitor
Length = 336
Score = 70.9 bits (172), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 42/116 (36%), Positives = 59/116 (50%), Gaps = 10/116 (8%)
Query: 75 VHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHE-YWTVAVDIKTNFRTIA---- 129
V +FV GS P + HGFPESWY W++Q+ + Y +A+D+K + A
Sbjct: 29 VRLHFVELGS--GPAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEI 86
Query: 130 DRY---FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 182
+ Y L + FLD LG ++ + IG D+GG LVW YPE V +N P
Sbjct: 87 EEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTP 142
Score = 31.2 bits (69), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 8 NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 42
++ + IG D+GG LVW YPE V +N P
Sbjct: 108 SQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTP 142
>pdb|1CQZ|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase.
pdb|1CQZ|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase.
pdb|1CR6|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cpu Inhibitor
pdb|1CR6|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cpu Inhibitor
pdb|1EK1|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Ciu Inhibitor
pdb|1EK1|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Ciu Inhibitor
pdb|1EK2|A Chain A, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cdu Inhibitor
pdb|1EK2|B Chain B, Crystal Structure Of Murine Soluble Epoxide Hydrolase
Complexed With Cdu Inhibitor
Length = 554
Score = 63.9 bits (154), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 58/117 (49%), Gaps = 10/117 (8%)
Query: 74 NVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTV-AVDIKTNFRTIA--- 129
+ +FV GS P + HGFPESW+ W++Q+ + + V A+D+K + +
Sbjct: 245 GIRLHFVEMGS--GPALCLCHGFPESWFSWRYQIPALAQAGFRVLAIDMKGYGDSSSPPE 302
Query: 130 -DRY---FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 182
+ Y L + FLD LG + + IG D+ G +VW+ YPE V +N P
Sbjct: 303 IEEYAMELLCKEMVTFLDKLGIPQAVFIGHDWAGVMVWNMALFYPERVRAVASLNTP 359
Score = 33.1 bits (74), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 27/110 (24%), Positives = 42/110 (38%), Gaps = 30/110 (27%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP-------------------------- 42
+ + IG D+ G +VW+ YPE V +N P
Sbjct: 326 QAVFIGHDWAGVMVWNMALFYPERVRAVASLNTPFMPPDPDVSPMKVIRSIPVFNYQLYF 385
Query: 43 -HPAVFKQELKK-MSQLIKTRFLLSRTIG--AFHENVHFNFVSAGSPKNP 88
P V + EL+K MS+ K+ F S G A H+ + +P++P
Sbjct: 386 QEPGVAEAELEKNMSRTFKSFFRASDETGFIAVHKATEIGGILVNTPEDP 435
>pdb|2ZJF|A Chain A, Crystal Structure Of Mycobacterium Tuberculosis Epoxide
Hydrolase B Complexed With An Inhibitor
Length = 362
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 86 KNPLMLFLHGFPESWYIWKHQMTEFSHE-YWTVAVDIKTNFRTIADRY-------FLVDS 137
+ PL++ LHGFPESWY W+HQ+ + Y VA+D + R+ R LV
Sbjct: 32 QGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAYRIKELVGD 91
Query: 138 LKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 182
+ LD G + ++G D+G + W+F +P+ + I+ P
Sbjct: 92 VVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVP 136
>pdb|2E3J|A Chain A, The Crystal Structure Of Epoxide Hydrolase B (Rv1938) From
Mycobacterium Tuberculosis At 2.1 Angstrom
Length = 356
Score = 62.4 bits (150), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 53/105 (50%), Gaps = 8/105 (7%)
Query: 86 KNPLMLFLHGFPESWYIWKHQMTEFSHE-YWTVAVDIKTNFRTIADRY-------FLVDS 137
+ PL++ LHGFPESWY W+HQ+ + Y VA+D + R+ R LV
Sbjct: 26 QGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYRVQKAYRIKELVGD 85
Query: 138 LKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 182
+ LD G + ++G D+G + W+F +P+ + I+ P
Sbjct: 86 VVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVP 130
>pdb|1EHY|A Chain A, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|B Chain B, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|C Chain C, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
pdb|1EHY|D Chain D, X-Ray Structure Of The Epoxide Hydrolase From
Agrobacterium Radiobacter Ad1
Length = 294
Score = 48.1 bits (113), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 31/121 (25%), Positives = 56/121 (46%), Gaps = 13/121 (10%)
Query: 74 NVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI-------KTNFR 126
+V ++V G+ P +L LHG+P W+ W + + Y + D+ K +
Sbjct: 18 DVKIHYVREGA--GPTLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLN 75
Query: 127 TIADRYFL---VDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPH 183
++ +Y L D LD LG + ++G DF ++ F+ KY + V+K+ I +
Sbjct: 76 DLS-KYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQ 134
Query: 184 P 184
P
Sbjct: 135 P 135
>pdb|1ZOI|A Chain A, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
pdb|1ZOI|B Chain B, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
pdb|1ZOI|C Chain C, Crystal Structure Of A Stereoselective Esterase From
Pseudomonas Putida Ifo12996
Length = 276
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 62/138 (44%), Gaps = 7/138 (5%)
Query: 73 ENVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEF-SHEYWTVAVDIKTNFRTIA-- 129
+ V + G P++ F HG+P S W Q+ F +H Y VA D + + R+
Sbjct: 8 DGVQIFYKDWGPRDAPVIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHDRRGHGRSSQVW 67
Query: 130 ---DRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPE-LVVKSIIINAPHPA 185
D D + + HLG + +G GG V ++ ++PE V K+++I A P
Sbjct: 68 DGHDMDHYADDVAAVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPL 127
Query: 186 VFKQELRGLIVPKSKKEG 203
+ + +PKS +G
Sbjct: 128 MVQTPGNPGGLPKSVFDG 145
>pdb|3CXU|A Chain A, Structure Of A Y149f Mutant Of Epoxide Hydrolase From
Solanum Tuberosum
pdb|3CXU|B Chain B, Structure Of A Y149f Mutant Of Epoxide Hydrolase From
Solanum Tuberosum
Length = 328
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 20/120 (16%)
Query: 74 NVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHE-YWTVAVDIKTNFRTIA--- 129
N+H + G P +LF+HGFPE WY W+HQM + Y VA D++ T
Sbjct: 22 NMHLAELGEG----PTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPL 77
Query: 130 ------DRYFLVDSLKVFLDHLGRN--RCILIGRDFGGSLVWSFL----DKYPELVVKSI 177
LV + L+ + N + ++ D+G + W DK LV S+
Sbjct: 78 NDPSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSV 137
>pdb|2CJP|A Chain A, Structure Of Potato (Solanum Tuberosum) Epoxide Hydrolase
I (Steh1)
pdb|2CJP|B Chain B, Structure Of Potato (Solanum Tuberosum) Epoxide Hydrolase
I (Steh1)
Length = 328
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/120 (28%), Positives = 51/120 (42%), Gaps = 20/120 (16%)
Query: 74 NVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHE-YWTVAVDIKTNFRTIA--- 129
N+H + G P +LF+HGFPE WY W+HQM + Y VA D++ T
Sbjct: 22 NMHLAELGEG----PTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPL 77
Query: 130 ------DRYFLVDSLKVFLDHLGRN--RCILIGRDFGGSLVWSFL----DKYPELVVKSI 177
LV + L+ + N + ++ D+G + W DK LV S+
Sbjct: 78 NDPSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSV 137
>pdb|3AFI|E Chain E, Crystal Structure Of Dbja (His-Dbja)
pdb|3AFI|A Chain A, Crystal Structure Of Dbja (His-Dbja)
pdb|3AFI|B Chain B, Crystal Structure Of Dbja (His-Dbja)
pdb|3AFI|F Chain F, Crystal Structure Of Dbja (His-Dbja)
Length = 316
Score = 45.4 bits (106), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 79 FVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI----KTNFRTIADRYF- 133
+ G+ P++LFLHG P S +IW++ + S +A D+ ++ IA R+F
Sbjct: 21 YRETGAQDAPVVLFLHGNPTSSHIWRNILPLVSPVAHCIAPDLIGFGQSGKPDIAYRFFD 80
Query: 134 LVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELV 173
V L F++ G L+ +D+G +L + + P+ V
Sbjct: 81 HVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFV 120
>pdb|3A2M|A Chain A, Crystal Structure Of Dbja (Wild Type Type I)
pdb|3A2M|B Chain B, Crystal Structure Of Dbja (Wild Type Type I)
pdb|3A2N|A Chain A, Crystal Structure Of Dbja (Wild Type Type Ii P21)
pdb|3A2N|B Chain B, Crystal Structure Of Dbja (Wild Type Type Ii P21)
pdb|3A2N|E Chain E, Crystal Structure Of Dbja (Wild Type Type Ii P21)
pdb|3A2N|F Chain F, Crystal Structure Of Dbja (Wild Type Type Ii P21)
Length = 312
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 79 FVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI----KTNFRTIADRYF- 133
+ G+ P++LFLHG P S +IW++ + S +A D+ ++ IA R+F
Sbjct: 21 YRETGAQDAPVVLFLHGNPTSSHIWRNILPLVSPVAHCIAPDLIGFGQSGKPDIAYRFFD 80
Query: 134 LVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELV 173
V L F++ G L+ +D+G +L + + P+ V
Sbjct: 81 HVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFV 120
>pdb|3A2L|A Chain A, Crystal Structure Of Dbja (Mutant Dbja Delta)
pdb|3A2L|B Chain B, Crystal Structure Of Dbja (Mutant Dbja Delta)
Length = 309
Score = 45.1 bits (105), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 5/100 (5%)
Query: 79 FVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI----KTNFRTIADRYF- 133
+ G+ P++LFLHG P S +IW++ + S +A D+ ++ IA R+F
Sbjct: 21 YRETGAQDAPVVLFLHGNPTSSHIWRNILPLVSPVAHCIAPDLIGFGQSGKPDIAYRFFD 80
Query: 134 LVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELV 173
V L F++ G L+ +D+G +L + + P+ V
Sbjct: 81 HVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFV 120
>pdb|3SK0|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Dhaa Mutant Dhaa12
Length = 311
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 77 FNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRTIAD--RYFL 134
++V G +LFLHG P S Y+W++ + + + +A D+ ++ YF
Sbjct: 22 MHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFF 81
Query: 135 VDS---LKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELV 173
D L F++ LG +L+ D+G +L + + + PE V
Sbjct: 82 DDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERV 123
>pdb|2V9Z|A Chain A, Structure Of The Rhodococcus Haloalkane Dehalogenase
Mutant With Enhanced Enantioselectivity
Length = 304
Score = 41.6 bits (96), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 77 FNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRTIAD--RYFL 134
++V G +LFLHG P S Y+W++ + + + +A D+ ++ YF
Sbjct: 22 MHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFF 81
Query: 135 VDS---LKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELV 173
D L F++ LG +L+ D+G +L + + + PE V
Sbjct: 82 DDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERV 123
>pdb|1BN6|A Chain A, Haloalkane Dehalogenase From A Rhodococcus Species
pdb|1BN7|A Chain A, Haloalkane Dehalogenase From A Rhodococcus Species
Length = 294
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 77 FNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRTIAD--RYFL 134
++V G +LFLHG P S Y+W++ + + + +A D+ ++ YF
Sbjct: 22 MHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFF 81
Query: 135 VDS---LKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELV 173
D L F++ LG +L+ D+G +L + + + PE V
Sbjct: 82 DDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERV 123
>pdb|1CQW|A Chain A, Nai Cocrystallised With Haloalkane Dehalogenase From A
Rhodococcus Species
Length = 295
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 77 FNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRTIAD--RYFL 134
++V G +LFLHG P S Y+W++ + + + +A D+ ++ YF
Sbjct: 19 MHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFF 78
Query: 135 VDS---LKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELV 173
D L F++ LG +L+ D+G +L + + + PE V
Sbjct: 79 DDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERV 120
>pdb|3FBW|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Dhaa Mutant C176y
Length = 299
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 77 FNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRTIAD--RYFL 134
++V G +LFLHG P S Y+W++ + + + +A D+ ++ YF
Sbjct: 22 MHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFF 81
Query: 135 VDS---LKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELV 173
D L F++ LG +L+ D+G +L + + + PE V
Sbjct: 82 DDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERV 123
>pdb|4F60|A Chain A, Crystal Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant (t148l, G171q, A172v, C176f)
Length = 299
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 77 FNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRTIAD--RYFL 134
++V G +LFLHG P S Y+W++ + + + +A D+ ++ YF
Sbjct: 22 MHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFF 81
Query: 135 VDS---LKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELV 173
D L F++ LG +L+ D+G +L + + + PE V
Sbjct: 82 DDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERV 123
>pdb|3G9X|A Chain A, Structure Of Haloalkane Dehalogenase Dhaa14 Mutant I135f
From Rhodococcus Rhodochrous
Length = 299
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 77 FNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRTIAD--RYFL 134
++V G +LFLHG P S Y+W++ + + + +A D+ ++ YF
Sbjct: 22 MHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFF 81
Query: 135 VDS---LKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELV 173
D L F++ LG +L+ D+G +L + + + PE V
Sbjct: 82 DDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERV 123
>pdb|3FWH|A Chain A, Structure Of Haloalkane Dehalogenase Mutant Dha15
(I135fC176Y) FROM Rhodococcus Rhodochrous
Length = 299
Score = 41.2 bits (95), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 77 FNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRTIAD--RYFL 134
++V G +LFLHG P S Y+W++ + + + +A D+ ++ YF
Sbjct: 22 MHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFF 81
Query: 135 VDS---LKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELV 173
D L F++ LG +L+ D+G +L + + + PE V
Sbjct: 82 DDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERV 123
>pdb|4FWB|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant Dhaa31 In Complex With 1, 2, 3 -
Trichloropropane
Length = 292
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 77 FNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRTIAD--RYFL 134
++V G +LFLHG P S Y+W++ + + + +A D+ ++ YF
Sbjct: 19 MHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFF 78
Query: 135 VDS---LKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELV 173
D L F++ LG +L+ D+G +L + + + PE V
Sbjct: 79 DDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERV 120
>pdb|3RK4|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant Dhaa31
pdb|3RLT|A Chain A, Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant Dhaa31 In Complex With 1, 2, 3 -
Trichloropropane
Length = 299
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/102 (26%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 77 FNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRTIAD--RYFL 134
++V G +LFLHG P S Y+W++ + + + +A D+ ++ YF
Sbjct: 22 MHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFF 81
Query: 135 VDS---LKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELV 173
D L F++ LG +L+ D+G +L + + + PE V
Sbjct: 82 DDHVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERV 123
>pdb|3HEA|A Chain A, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|B Chain B, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|C Chain C, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|D Chain D, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|E Chain E, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
pdb|3HEA|F Chain F, The L29pL124I MUTATION OF PSEUDOMONAS FLUORESCENS ESTERASE
Length = 271
Score = 40.8 bits (94), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Query: 74 NVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHE-YWTVAVDIKTNFR-----T 127
++F +G P +LF HG+P +W++QM S Y T+A D + R T
Sbjct: 10 QIYFKDWGSGKP----VLFSHGWPLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWT 65
Query: 128 IADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVF 187
D D + ++HL L+G GG V ++ ++ V +++ +F
Sbjct: 66 GNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPIF 125
Query: 188 KQE 190
Q+
Sbjct: 126 GQK 128
>pdb|3KXP|A Chain A, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|B Chain B, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|C Chain C, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|D Chain D, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|E Chain E, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|F Chain F, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|G Chain G, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|H Chain H, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|I Chain I, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|J Chain J, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|K Chain K, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
pdb|3KXP|L Chain L, Crystal Structure Of E-2-(Acetamidomethylene)succinate
Hydrolase
Length = 314
Score = 40.4 bits (93), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 44/111 (39%), Gaps = 7/111 (6%)
Query: 75 VHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVD-----IKTNFRTIA 129
+ N GS PL LF HG + +++ S + T+AVD + T
Sbjct: 58 ITLNVREKGS--GPLXLFFHGITSNSAVFEPLXIRLSDRFTTIAVDQRGHGLSDKPETGY 115
Query: 130 DRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIIN 180
+ D + + L R IL+G G + KYP+LV + I+
Sbjct: 116 EANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAID 166
>pdb|1Y37|A Chain A, Structure Of Fluoroacetate Dehalogenase From Burkholderia
Sp. Fa1
pdb|1Y37|B Chain B, Structure Of Fluoroacetate Dehalogenase From Burkholderia
Sp. Fa1
Length = 304
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 51/123 (41%), Gaps = 24/123 (19%)
Query: 74 NVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKT---------- 123
+V N V GS P +L LHGFP++ ++W ++EY V D++
Sbjct: 14 DVTINCVVGGS--GPALLLLHGFPQNLHMWARVAPLLANEYTVVCADLRGYGGSSKPVGA 71
Query: 124 ------NFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSI 177
+FR +A + + LG R L+G D GG +P+ V+
Sbjct: 72 PDHANYSFRAMA------SDQRELMRTLGFERFHLVGHDRGGRTGHRMALDHPDSVLSLA 125
Query: 178 IIN 180
+++
Sbjct: 126 VLD 128
>pdb|4F5Z|A Chain A, Crystal Structure Of Rhodococcus Rhodochrous Haloalkane
Dehalogenase Mutant (l95v, A172v)
Length = 299
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/102 (25%), Positives = 49/102 (48%), Gaps = 5/102 (4%)
Query: 77 FNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRTIAD--RYFL 134
++V G +LFLHG P S Y+W++ + + + +A D+ ++ YF
Sbjct: 22 MHYVDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFF 81
Query: 135 VDS---LKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELV 173
D L F++ +G +L+ D+G +L + + + PE V
Sbjct: 82 DDHVRYLDAFIEAVGLEEVVLVIHDWGSALGFHWAKRNPERV 123
>pdb|3HI4|A Chain A, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|B Chain B, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|C Chain C, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|D Chain D, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|E Chain E, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
pdb|3HI4|F Chain F, Switching Catalysis From Hydrolysis To Perhydrolysis In P.
Fluorescens Esterase
Length = 271
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/123 (24%), Positives = 53/123 (43%), Gaps = 10/123 (8%)
Query: 74 NVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHE-YWTVAVDIKTNFR-----T 127
++F +G P +LF HG+P +W++QM S Y T+A D + R T
Sbjct: 10 QIYFKDWGSGKP----VLFSHGWPLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWT 65
Query: 128 IADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVF 187
D D + ++HL L+G GG V ++ ++ V +++ +F
Sbjct: 66 GNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLF 125
Query: 188 KQE 190
Q+
Sbjct: 126 GQK 128
>pdb|3KDA|A Chain A, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
pdb|3KDA|B Chain B, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
pdb|3KDA|C Chain C, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
pdb|3KDA|D Chain D, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H269a Mutation
Length = 301
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 73 ENVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRTIADRY 132
+ V ++V G + PL++ +HGF ++WY W M E + + +A D+ ++ +
Sbjct: 18 DGVKLHYVKGG--QGPLVMLVHGFGQTWYEWHQLMPELAKRFTVIAPDLPGLGQSEPPKT 75
Query: 133 -FLVDSLKVFLDHLGRNRC-----ILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHP 184
+ + + V+L L R L+ D G + + K + + + + AP P
Sbjct: 76 GYSGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIP 133
>pdb|3PI6|A Chain A, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
pdb|3PI6|B Chain B, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
pdb|3PI6|C Chain C, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
pdb|3PI6|D Chain D, Crystal Structure Of The Cftr Inhibitory Factor Cif With
The H177y Mutation
Length = 301
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 73 ENVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRTIADRY 132
+ V ++V G + PL++ +HGF ++WY W M E + + +A D+ ++ +
Sbjct: 18 DGVKLHYVKGG--QGPLVMLVHGFGQTWYEWHQLMPELAKRFTVIAPDLPGLGQSEPPKT 75
Query: 133 -FLVDSLKVFLDHLGRNRC-----ILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHP 184
+ + + V+L L R L+ D G + + K + + + + AP P
Sbjct: 76 GYSGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIP 133
>pdb|3KD2|A Chain A, Crystal Structure Of The Cftr Inhibitory Factor Cif
pdb|3KD2|B Chain B, Crystal Structure Of The Cftr Inhibitory Factor Cif
pdb|3KD2|C Chain C, Crystal Structure Of The Cftr Inhibitory Factor Cif
pdb|3KD2|D Chain D, Crystal Structure Of The Cftr Inhibitory Factor Cif
Length = 301
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/118 (22%), Positives = 53/118 (44%), Gaps = 8/118 (6%)
Query: 73 ENVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRTIADRY 132
+ V ++V G + PL++ +HGF ++WY W M E + + +A D+ ++ +
Sbjct: 18 DGVKLHYVKGG--QGPLVMLVHGFGQTWYEWHQLMPELAKRFTVIAPDLPGLGQSEPPKT 75
Query: 133 -FLVDSLKVFLDHLGRNRC-----ILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHP 184
+ + + V+L L R L+ D G + + K + + + + AP P
Sbjct: 76 GYSGEQVAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIP 133
>pdb|2R11|A Chain A, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|B Chain B, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|C Chain C, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
pdb|2R11|D Chain D, Crystal Structure Of Putative Hydrolase (2632844) From
Bacillus Subtilis At 1.96 A Resolution
Length = 306
Score = 37.7 bits (86), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 34/125 (27%), Positives = 55/125 (44%), Gaps = 12/125 (9%)
Query: 62 FLLSRTIGAFHENVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVD- 120
F +S G H +++G P ++ LHG S W + ++S +Y T AVD
Sbjct: 48 FYISTRFGQTH------VIASGPEDAPPLVLLHGALFSSTXWYPNIADWSSKYRTYAVDI 101
Query: 121 IKTNFRTIAD-----RYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVK 175
I ++I + R + L D+LG + IG GG +FL + PE V
Sbjct: 102 IGDKNKSIPENVSGTRTDYANWLLDVFDNLGIEKSHXIGLSLGGLHTXNFLLRXPERVKS 161
Query: 176 SIIIN 180
+ I++
Sbjct: 162 AAILS 166
>pdb|3B12|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase D104
Mutant From Burkholderia Sp. Fa1 In Complex With
Fluoroacetate
pdb|3B12|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase D104
Mutant From Burkholderia Sp. Fa1 In Complex With
Fluoroacetate
Length = 304
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 50/123 (40%), Gaps = 24/123 (19%)
Query: 74 NVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKT---------- 123
+V N V GS P +L LHGFP++ ++W ++EY V D++
Sbjct: 14 DVTINCVVGGS--GPALLLLHGFPQNLHMWARVAPLLANEYTVVCADLRGYGGSSKPVGA 71
Query: 124 ------NFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSI 177
+FR +A + + LG R L+G GG +P+ V+
Sbjct: 72 PDHANYSFRAMA------SDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLA 125
Query: 178 IIN 180
+++
Sbjct: 126 VLD 128
>pdb|3QIT|A Chain A, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|B Chain B, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|C Chain C, Thioesterase Domain From Curacin Biosynthetic Pathway
pdb|3QIT|D Chain D, Thioesterase Domain From Curacin Biosynthetic Pathway
Length = 286
Score = 37.0 bits (84), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 28/115 (24%), Positives = 48/115 (41%), Gaps = 8/115 (6%)
Query: 79 FVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHE-YWTVAVDIKTNFRTIADRYFLVDS 137
S GSP++P++L +HG E W+ + + Y VA D+ + R+ S
Sbjct: 18 LCSWGSPEHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPDLFGHGRSSHLEMVTSYS 77
Query: 138 LKVFLDHLGR-------NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPA 185
FL + R +L+G G L + P+ + + I++ P PA
Sbjct: 78 SLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPA 132
>pdb|1A88|A Chain A, Chloroperoxidase L
pdb|1A88|B Chain B, Chloroperoxidase L
pdb|1A88|C Chain C, Chloroperoxidase L
Length = 275
Score = 36.6 bits (83), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 31/115 (26%), Positives = 53/115 (46%), Gaps = 8/115 (6%)
Query: 84 SPKNPL-MLFLHGFPESWYIWKHQMTEF-SHEYWTVAVDIKTNFR-----TIADRYFLVD 136
P++ L ++F HG+P S W +QM F SH Y +A D + + R T D
Sbjct: 17 GPRDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHDRRGHGRSDQPSTGHDMDTYAA 76
Query: 137 SLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKY-PELVVKSIIINAPHPAVFKQE 190
+ + L + IG GG V ++ + P V K+++++A P + K +
Sbjct: 77 DVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSD 131
>pdb|1VA4|A Chain A, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|B Chain B, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|C Chain C, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|D Chain D, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|E Chain E, Pseudomonas Fluorescens Aryl Esterase
pdb|1VA4|F Chain F, Pseudomonas Fluorescens Aryl Esterase
Length = 279
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 10/123 (8%)
Query: 74 NVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHE-YWTVAVDIKTNFR-----T 127
++F +G P +LF HG+ +W++QM S Y T+A D + R T
Sbjct: 10 QIYFKDWGSGKP----VLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWT 65
Query: 128 IADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVF 187
D D + ++HL L+G GG V ++ ++ V +++ +F
Sbjct: 66 GNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLF 125
Query: 188 KQE 190
Q+
Sbjct: 126 GQK 128
>pdb|3T4U|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T4U|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|A Chain A, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|B Chain B, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|C Chain C, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|D Chain D, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|E Chain E, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
pdb|3T52|F Chain F, L29i Mutation In An Aryl Esterase From Pseudomonas
Fluorescens Leads To Unique Peptide Flip And Increased
Activity
Length = 271
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 10/123 (8%)
Query: 74 NVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHE-YWTVAVDIKTNFR-----T 127
++F +G P +LF HG+ +W++QM S Y T+A D + R T
Sbjct: 10 QIYFKDWGSGKP----VLFSHGWILDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWT 65
Query: 128 IADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVF 187
D D + ++HL L+G GG V ++ ++ V +++ +F
Sbjct: 66 GNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLF 125
Query: 188 KQE 190
Q+
Sbjct: 126 GQK 128
>pdb|3IA2|A Chain A, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|B Chain B, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|C Chain C, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|D Chain D, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|E Chain E, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
pdb|3IA2|F Chain F, Pseudomonas Fluorescens Esterase Complexed To The
R-Enantiomer Of A Sulfonate Transition State Analog
Length = 271
Score = 35.8 bits (81), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 29/123 (23%), Positives = 52/123 (42%), Gaps = 10/123 (8%)
Query: 74 NVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHE-YWTVAVDIKTNFR-----T 127
++F +G P +LF HG+ +W++QM S Y T+A D + R T
Sbjct: 10 QIYFKDWGSGKP----VLFSHGWLLDADMWEYQMEYLSSRGYRTIAFDRRGFGRSDQPWT 65
Query: 128 IADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVF 187
D D + ++HL L+G GG V ++ ++ V +++ +F
Sbjct: 66 GNDYDTFADDIAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLF 125
Query: 188 KQE 190
Q+
Sbjct: 126 GQK 128
>pdb|2XMZ|A Chain A, Structure Of Menh From S. Aureus
Length = 269
Score = 35.4 bits (80), Expect = 0.024, Method: Compositional matrix adjust.
Identities = 26/128 (20%), Positives = 54/128 (42%), Gaps = 12/128 (9%)
Query: 75 VHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI------KTNFRTI 128
H+ F A N +++FLHGF + + + +F+ Y + +D+ +++
Sbjct: 4 THYKFYEANVETNQVLVFLHGFLSDSRTYHNHIEKFTDNYHVITIDLPGHGEDQSSMDET 63
Query: 129 ADRYFLVDSLKVFLDHLGRNRCILIGRDFGG--SLVWSFLDKYPELVVKSIIINAPHPAV 186
+ ++ L LD L G GG +L ++ P + ++I+ + P +
Sbjct: 64 WNFDYITTLLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIP---ISNLILESTSPGI 120
Query: 187 FKQELRGL 194
K+E L
Sbjct: 121 -KEEANQL 127
>pdb|1A8S|A Chain A, Chloroperoxidase FPROPIONATE COMPLEX
Length = 273
Score = 35.0 bits (79), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 30/124 (24%), Positives = 56/124 (45%), Gaps = 11/124 (8%)
Query: 74 NVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHE-YWTVAVDIKTNFRTIA--- 129
+++ +G P ++F HG+P + W+ QM + + Y +A D + + R+
Sbjct: 10 QIYYKDWGSGQP----IVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWS 65
Query: 130 --DRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPEL-VVKSIIINAPHPAV 186
D D L ++HL +L G GG V ++ ++ V K+ +I+A P +
Sbjct: 66 GNDMDTYADDLAQLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLM 125
Query: 187 FKQE 190
K E
Sbjct: 126 LKTE 129
>pdb|1C4X|A Chain A, 2-Hydroxy-6-Oxo-6-Phenylhexa-2,4-Dienoate Hydrolase (Bphd)
From Rhodococcus Sp. Strain Rha1
Length = 285
Score = 33.9 bits (76), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 25/134 (18%), Positives = 61/134 (45%), Gaps = 21/134 (15%)
Query: 51 LKKMSQLIKTRFLLSRTIGAFHENVHFNFVSAGSPKNPLMLFLHGFPESWYI---WKHQM 107
+ K ++I+ RF S T+ + + + AG P++P ++ LHG + W+ +
Sbjct: 1 MAKTVEIIEKRFP-SGTLAS-------HALVAGDPQSPAVVLLHGAGPGAHAASNWRPII 52
Query: 108 TEFSHEYWTVAVDI----KTNFRTIADRYFL------VDSLKVFLDHLGRNRCILIGRDF 157
+ + ++ VA D+ ++ + + + V+ + ++H G + ++G
Sbjct: 53 PDLAENFFVVAPDLIGFGQSEYPETYPGHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSM 112
Query: 158 GGSLVWSFLDKYPE 171
GG++ + + PE
Sbjct: 113 GGAVTLQLVVEAPE 126
>pdb|4B9A|A Chain A, Structure Of A Putative Epoxide Hydrolase From Pseudomonas
Aeruginosa.
pdb|4B9E|A Chain A, Structure Of A Putative Epoxide Hydrolase From Pseudomonas
Aeruginosa, With Bound Mfa
Length = 301
Score = 33.9 bits (76), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 23/103 (22%), Positives = 39/103 (37%), Gaps = 8/103 (7%)
Query: 86 KNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRTIADRYFLVDSLKVFL--- 142
P +L LHG+P++ W + +Y V D++ + A D K L
Sbjct: 30 SGPPLLLLHGYPQTHLAWHRIAPRLAEDYSVVLADLRGYGESRALDEEGADYSKAALARD 89
Query: 143 -----DHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIIN 180
LG R +IG D G + + +P+ V + +
Sbjct: 90 QLETMGQLGFERFAVIGHDRGARVGYRLALDHPQAVAAFVSLT 132
>pdb|2XT0|A Chain A, Dehalogenase Dppa From Plesiocystis Pacifica Sir-I
Length = 297
Score = 33.5 bits (75), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 32/118 (27%), Positives = 53/118 (44%), Gaps = 11/118 (9%)
Query: 73 ENVHFNFVSAGSPKNP--LMLFLHGFPESWYIWKHQMTEFSHEYW-TVAVDI-------K 122
E + ++V G P++ L LHG P ++++ + F+ VA D+ K
Sbjct: 31 EGLRMHYVDEG-PRDAEHTFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDK 89
Query: 123 TNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIIN 180
+ F SL FLD L R L+ +D+GG L + P+LV + I++N
Sbjct: 90 PTDDAVYTFGFHRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMN 147
>pdb|2YYS|A Chain A, Crystal Structure Of The Proline Iminopeptidase-Related
Protein Ttha1809 From Thermus Thermophilus Hb8
pdb|2YYS|B Chain B, Crystal Structure Of The Proline Iminopeptidase-Related
Protein Ttha1809 From Thermus Thermophilus Hb8
Length = 286
Score = 33.1 bits (74), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 26/109 (23%), Positives = 49/109 (44%), Gaps = 11/109 (10%)
Query: 83 GSPKNPLMLFLHGFPE-SWYIWKHQMTEFSHEYWTVAVDIKTNFRTIA----DRYFLVDS 137
G + P + LHG P + Y+ + + ++ + V D + + R++ R F VD+
Sbjct: 21 GPVEGPALFVLHGGPGGNAYVLREGLQDYLEGFRVVYFDQRGSGRSLELPQDPRLFTVDA 80
Query: 138 LK----VFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 182
L + + LG R L+ FG + L ++P+ + I+ AP
Sbjct: 81 LVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQ--AEGAILLAP 127
>pdb|3N2Z|B Chain B, The Structure Of Human Prolylcarboxypeptidase At 2.80
Angstroms Resolution
Length = 446
Score = 32.7 bits (73), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 30/60 (50%)
Query: 123 TNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 182
T+ + +AD L+ LK + I IG +GG L F KYP +VV ++ +AP
Sbjct: 101 TSEQALADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAP 160
Score = 29.6 bits (65), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 14/32 (43%), Positives = 19/32 (59%)
Query: 11 ILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 42
I IG +GG L F KYP +VV ++ +AP
Sbjct: 129 IAIGGSYGGMLAAWFRMKYPHMVVGALAASAP 160
>pdb|3U1T|A Chain A, Haloalkane Dehalogenase, Dmma, Of Marine Microbial Origin
pdb|3U1T|B Chain B, Haloalkane Dehalogenase, Dmma, Of Marine Microbial Origin
Length = 309
Score = 32.3 bits (72), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 29/92 (31%), Positives = 43/92 (46%), Gaps = 8/92 (8%)
Query: 73 ENVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTE-FSHEYWTVAVD-IKTNFRTIAD 130
E +V GS + +LFLHG P S Y+W++ + + Y VA D I D
Sbjct: 17 EGATIAYVDEGSGQP--VLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGXGDSAKPD 74
Query: 131 -RYFLVDSLKV---FLDHLGRNRCILIGRDFG 158
Y L D + F+D LG + +L+ D+G
Sbjct: 75 IEYRLQDHVAYXDGFIDALGLDDXVLVIHDWG 106
>pdb|2VF2|A Chain A, X-Ray Crystal Structure Of Hsad From Mycobacterium
Tuberculosis
pdb|2VF2|B Chain B, X-Ray Crystal Structure Of Hsad From Mycobacterium
Tuberculosis
Length = 311
Score = 32.0 bits (71), Expect = 0.30, Method: Compositional matrix adjust.
Identities = 24/113 (21%), Positives = 45/113 (39%), Gaps = 9/113 (7%)
Query: 77 FNFVSAGSPKNPLMLFLHGF---PESWYIWKHQMTEFSHEYWTVAVDI----KTNFRTIA 129
++ AG + ++ LHG SW + + + + +AVD ++ R
Sbjct: 46 LHYHEAGVGNDQTVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRAEH 105
Query: 130 DRY--FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIIN 180
++ + +LK D LG R L+G GG F YP + +++
Sbjct: 106 GQFNRYAAMALKGLFDQLGLGRVPLVGNSLGGGTAVRFALDYPARAGRLVLMG 158
>pdb|4DNP|A Chain A, Crystal Structure Of Dad2
Length = 269
Score = 31.6 bits (70), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 14/116 (12%)
Query: 77 FNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKT---------NFR- 126
N GS + L+L HGF W + F +Y V D+ +FR
Sbjct: 11 LNVRVVGSGERVLVL-AHGFGTDQSAWNRILPFFLRDYRVVLYDLVCAGSVNPDFFDFRR 69
Query: 127 -TIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINA 181
T D Y VD L LD LG + C +G + + PEL K I+I A
Sbjct: 70 YTTLDPY--VDDLLHILDALGIDCCAYVGHSVSAMIGILASIRRPELFSKLILIGA 123
>pdb|2WUD|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis
pdb|2WUD|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis
pdb|2WUE|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopoda
pdb|2WUE|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopoda
pdb|2WUF|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With 4,9dsha
pdb|2WUF|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With 4,9dsha
pdb|2WUG|A Chain A, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopda
pdb|2WUG|B Chain B, Crystal Structure Of S114a Mutant Of Hsad From
Mycobacterium Tuberculosis In Complex With Hopda
Length = 291
Score = 31.2 bits (69), Expect = 0.49, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 44/114 (38%), Gaps = 11/114 (9%)
Query: 77 FNFVSAGSPKNPLMLFLHGF---PESWYIWKHQMTEFSHEYWTVAVD-------IKTNFR 126
++ AG + ++ LHG SW + + + + +AVD K
Sbjct: 26 LHYHEAGVGNDQTVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRAEH 85
Query: 127 TIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIIN 180
+RY + +LK D LG R L+G GG F YP + +++
Sbjct: 86 GQFNRYAAM-ALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMG 138
>pdb|4DNQ|A Chain A, Crystal Structure Of Dad2 S96a Mutant
pdb|4DNQ|B Chain B, Crystal Structure Of Dad2 S96a Mutant
pdb|4DNQ|C Chain C, Crystal Structure Of Dad2 S96a Mutant
pdb|4DNQ|D Chain D, Crystal Structure Of Dad2 S96a Mutant
pdb|4DNQ|E Chain E, Crystal Structure Of Dad2 S96a Mutant
pdb|4DNQ|F Chain F, Crystal Structure Of Dad2 S96a Mutant
pdb|4DNQ|G Chain G, Crystal Structure Of Dad2 S96a Mutant
pdb|4DNQ|H Chain H, Crystal Structure Of Dad2 S96a Mutant
pdb|4DNQ|I Chain I, Crystal Structure Of Dad2 S96a Mutant
pdb|4DNQ|J Chain J, Crystal Structure Of Dad2 S96a Mutant
pdb|4DNQ|K Chain K, Crystal Structure Of Dad2 S96a Mutant
pdb|4DNQ|L Chain L, Crystal Structure Of Dad2 S96a Mutant
Length = 269
Score = 31.2 bits (69), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 45/116 (38%), Gaps = 14/116 (12%)
Query: 77 FNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKT---------NFR- 126
N GS + L+L HGF W + F +Y V D+ +FR
Sbjct: 11 LNVRVVGSGERVLVL-AHGFGTDQSAWNRILPFFLRDYRVVLYDLVCAGSVNPDFFDFRR 69
Query: 127 -TIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINA 181
T D Y VD L LD LG + C +G + + PEL K I+I A
Sbjct: 70 YTTLDPY--VDDLLHILDALGIDCCAYVGHAVSAMIGILASIRRPELFSKLILIGA 123
>pdb|3QYJ|A Chain A, Crystal Structure Of Alr0039, A Putative AlphaBETA
HYDROLASE FROM Nostoc Sp Pcc 7120.
pdb|3QYJ|B Chain B, Crystal Structure Of Alr0039, A Putative AlphaBETA
HYDROLASE FROM Nostoc Sp Pcc 7120
Length = 291
Score = 30.8 bits (68), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 26/114 (22%), Positives = 49/114 (42%), Gaps = 14/114 (12%)
Query: 78 NFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKT-----------NFR 126
N V AG PL+L LHG+P++ +W ++ + VA D++ +
Sbjct: 18 NLVKAGH-GAPLLL-LHGYPQTHVMWHKIAPLLANNFTVVATDLRGYGDSSRPASVPHHI 75
Query: 127 TIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIIN 180
+ R D ++V + LG + ++G D G + +P V K +++
Sbjct: 76 NYSKRVMAQDQVEV-MSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLD 128
>pdb|1AZW|A Chain A, Proline Iminopeptidase From Xanthomonas Campestris Pv.
Citri
pdb|1AZW|B Chain B, Proline Iminopeptidase From Xanthomonas Campestris Pv.
Citri
Length = 313
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/107 (23%), Positives = 47/107 (43%), Gaps = 7/107 (6%)
Query: 79 FVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRTI--AD-----R 131
F G+P ++ LHG P K + +Y V D + + R+ AD
Sbjct: 26 FEQCGNPHGKPVVMLHGGPGGGCNDKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTT 85
Query: 132 YFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSII 178
+ LV ++ HLG +R + G +G +L ++ +P+ V + ++
Sbjct: 86 WDLVADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVL 132
>pdb|3V1K|A Chain A, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400.
pdb|3V1K|B Chain B, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400.
pdb|3V1N|A Chain A, Crystal Structure Of The H265q Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, After Exposure
To Its Substrate Hopda
Length = 286
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 137 SLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIIN 180
++K +D L +R L+G GG+ +F +YP+ + K I++
Sbjct: 93 AVKGLMDALDIDRAHLVGNSMGGATALNFALEYPDRIGKLILMG 136
>pdb|2OG1|A Chain A, Crystal Structure Of Bphd, A C-C Hydrolase From
Burkholderia Xenovorans Lb400
pdb|2OG1|B Chain B, Crystal Structure Of Bphd, A C-C Hydrolase From
Burkholderia Xenovorans Lb400
pdb|2PU5|A Chain A, Crystal Structure Of A C-C Bond Hydrolase, Bphd, From
Burkholderia Xenovorans Lb400
pdb|2PU5|B Chain B, Crystal Structure Of A C-C Bond Hydrolase, Bphd, From
Burkholderia Xenovorans Lb400
Length = 286
Score = 30.0 bits (66), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 137 SLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIIN 180
++K +D L +R L+G GG+ +F +YP+ + K I++
Sbjct: 93 AVKGLMDALDIDRAHLVGNSMGGATALNFALEYPDRIGKLILMG 136
>pdb|2PUH|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
Its Substrate Hopda
Length = 286
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 137 SLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIIN 180
++K +D L +R L+G GG+ +F +YP+ + K I++
Sbjct: 93 AVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMG 136
>pdb|3V1L|A Chain A, Crystal Structure Of The S112aH265Q MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400
pdb|3V1M|A Chain A, Crystal Structure Of The S112aH265Q MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400,
After Exposure To Its Substrate Hopda
Length = 286
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 137 SLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIIN 180
++K +D L +R L+G GG+ +F +YP+ + K I++
Sbjct: 93 AVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMG 136
>pdb|2PU7|A Chain A, Crystal Structure Of S112aH265A DOUBLE MUTANT OF A C-C
Hydrolase, Bphd, From Burkholderia Xenovorans Lb400
pdb|2PUJ|A Chain A, Crystal Structure Of The S112aH265A DOUBLE MUTANT OF A C-C
Hydrolase, Bphd From Burkholderia Xenovorans Lb400, In
Complex With Its Substrate Hopda
Length = 286
Score = 29.3 bits (64), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 137 SLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIIN 180
++K +D L +R L+G GG+ +F +YP+ + K I++
Sbjct: 93 AVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMG 136
>pdb|2RHT|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
3-Cl Hopda
pdb|2RHW|A Chain A, Crystal Structure Of The S112a Mutant Of A C-C Hydrolase,
Bphd From Burkholderia Xenovorans Lb400, In Complex With
3,10-Di-Fluoro Hopda
pdb|2RI6|A Chain A, Crystal Structure Of S112a Mutant Of A C-C Hydrolase, Bphd
From Burkholderia Xenovorans Lb400
Length = 283
Score = 29.3 bits (64), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/44 (29%), Positives = 25/44 (56%)
Query: 137 SLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIIN 180
++K +D L +R L+G GG+ +F +YP+ + K I++
Sbjct: 90 AVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMG 133
>pdb|4F0J|A Chain A, Crystal Structure Of A Probable Hydrolytic Enzyme (Pa3053)
From Pseudomonas Aeruginosa Pao1 At 1.50 A Resolution
Length = 315
Score = 29.3 bits (64), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 14/47 (29%), Positives = 22/47 (46%)
Query: 134 LVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIIN 180
L + L+ LG R +IG GG L + YP V + +++N
Sbjct: 100 LAANTHALLERLGVARASVIGHSXGGXLATRYALLYPRQVERLVLVN 146
>pdb|2WFL|B Chain B, Crystal Structure Of Polyneuridine Aldehyde Esterase
Length = 264
Score = 29.3 bits (64), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 14/94 (14%)
Query: 5 PCRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINA--PHPA-VFKQELKKMSQLIKTR 61
P + +L+G FGG + ++ YPE + ++ ++A P P +K ++
Sbjct: 76 PPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPAD 135
Query: 62 FLLSRTIGAFHENVHFNFVSAGSPKNPLMLFLHG 95
+L F + G+P+NP M + G
Sbjct: 136 MMLDS-----------QFSTYGNPENPGMSMILG 158
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 100 WYIWKHQMTEFSHEYWTVAVDIKT---NFRTIADRYFLVDSLKVFLDHLGR----NRCIL 152
WY K + H+ AVD+ N R + + + D + ++ + + +L
Sbjct: 26 WYKLKPLLESAGHK--VTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKVVL 83
Query: 153 IGRDFGGSLVWSFLDKYPELVVKSIIINAPHP 184
+G FGG + ++ YPE + ++ ++A P
Sbjct: 84 LGHSFGGMSLGLAMETYPEKISVAVFMSAMMP 115
>pdb|3W06|A Chain A, Crystal Structure Of Arabidopsis Thaliana Dwarf14 Like
(atd14l)
Length = 272
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 16/125 (12%)
Query: 68 IGAFHENVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRT 127
+G E + + +G ++ HGF +WKH + +Y V D T
Sbjct: 3 MGVVEEAHNVKVIGSGEAT---IVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTT 59
Query: 128 IADRYFLVD----------SLKVFLDHLGRNRCILIGRDFGGSL-VWSFLDKYPELVVKS 176
D YF D L L+ L CI +G + V + L++ P+L K
Sbjct: 60 NPD-YFDFDRYSNLEGYSFDLIAILEDLKIESCIFVGHSVSAMIGVLASLNR-PDLFSKI 117
Query: 177 IIINA 181
++I+A
Sbjct: 118 VMISA 122
>pdb|4IH1|A Chain A, Crystal Structure Of Karrikin Insensitive 2 (kai2) From
Arabidopsis Thaliana
Length = 270
Score = 29.3 bits (64), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 16/125 (12%)
Query: 68 IGAFHENVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRT 127
+G E + + +G ++ HGF +WKH + +Y V D T
Sbjct: 1 MGVVEEAHNVKVIGSGEAT---IVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTT 57
Query: 128 IADRYFLVD----------SLKVFLDHLGRNRCILIGRDFGGSL-VWSFLDKYPELVVKS 176
D YF D L L+ L CI +G + V + L++ P+L K
Sbjct: 58 NPD-YFDFDRYSNLEGYSFDLIAILEDLKIESCIFVGHSVSAMIGVLASLNR-PDLFSKI 115
Query: 177 IIINA 181
++I+A
Sbjct: 116 VMISA 120
>pdb|2WFL|A Chain A, Crystal Structure Of Polyneuridine Aldehyde Esterase
Length = 264
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 14/94 (14%)
Query: 5 PCRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINA--PHPA-VFKQELKKMSQLIKTR 61
P + +L+G FGG + ++ YPE + ++ ++A P P +K ++
Sbjct: 76 PPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPAD 135
Query: 62 FLLSRTIGAFHENVHFNFVSAGSPKNPLMLFLHG 95
+L F + G+P+NP M + G
Sbjct: 136 MMLDS-----------QFSTYGNPENPGMSMILG 158
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 100 WYIWKHQMTEFSHEYWTVAVDIKT---NFRTIADRYFLVDSLKVFLDHLGR----NRCIL 152
WY K + H+ AVD+ N R + + + D + ++ + + +L
Sbjct: 26 WYKLKPLLESAGHK--VTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKVVL 83
Query: 153 IGRDFGGSLVWSFLDKYPELVVKSIIINAPHP 184
+G FGG + ++ YPE + ++ ++A P
Sbjct: 84 LGHSFGGMSLGLAMETYPEKISVAVFMSAMMP 115
>pdb|4IHA|A Chain A, Crystal Structure Of Rice Dwarf14 (d14) In Complex With A
Gr24 Hydrolysis Intermediate
pdb|4IHA|B Chain B, Crystal Structure Of Rice Dwarf14 (d14) In Complex With A
Gr24 Hydrolysis Intermediate
pdb|4IH9|A Chain A, Crystal Structure Of Rice Dwarf14 (d14)
pdb|4IH9|B Chain B, Crystal Structure Of Rice Dwarf14 (d14)
Length = 268
Score = 28.9 bits (63), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 38/102 (37%), Gaps = 9/102 (8%)
Query: 89 LMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKT---------NFRTIADRYFLVDSLK 139
+++ HGF W + + ++ V D+ +FR + VD L
Sbjct: 21 VVVLSHGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAGSVNPDHFDFRRYDNLDAYVDDLL 80
Query: 140 VFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINA 181
LD L RC +G + + P+L K ++I A
Sbjct: 81 AILDALRIPRCAFVGHSVSAMIGILASIRRPDLFAKLVLIGA 122
>pdb|4HRX|A Chain A, Crystal Structure Of Kai2
pdb|4HRY|A Chain A, The Structure Of Arabidopsis Thaliana Kai2
pdb|4HTA|A Chain A, The Structure Of The Karrikin Insensitive (kai2) Protein
In Arabidopsis Thaliana
Length = 288
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 30/125 (24%), Positives = 49/125 (39%), Gaps = 16/125 (12%)
Query: 68 IGAFHENVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRT 127
+G E + + +G ++ HGF +WKH + +Y V D T
Sbjct: 19 MGVVEEAHNVKVIGSGEAT---IVLGHGFGTDQSVWKHLVPHLVDDYRVVLYDNMGAGTT 75
Query: 128 IADRYFLVD----------SLKVFLDHLGRNRCILIGRDFGGSL-VWSFLDKYPELVVKS 176
D YF D L L+ L CI +G + V + L++ P+L K
Sbjct: 76 NPD-YFDFDRYSNLEGYSFDLIAILEDLKIESCIFVGHSVSAMIGVLASLNR-PDLFSKI 133
Query: 177 IIINA 181
++I+A
Sbjct: 134 VMISA 138
>pdb|3W04|A Chain A, Crystal Structure Of Oryza Sativa Dwarf14 (d14)
pdb|3W04|B Chain B, Crystal Structure Of Oryza Sativa Dwarf14 (d14)
pdb|3W05|A Chain A, Crystal Structure Of Oryza Sativa Dwarf14 (d14) In Complex
With Pmsf
pdb|3W05|B Chain B, Crystal Structure Of Oryza Sativa Dwarf14 (d14) In Complex
With Pmsf
Length = 266
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 38/102 (37%), Gaps = 9/102 (8%)
Query: 89 LMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKT---------NFRTIADRYFLVDSLK 139
+++ HGF W + + ++ V D+ +FR + VD L
Sbjct: 19 VVVLSHGFGTDQSAWSRVLPYLTRDHRVVLYDLVCAGSVNPDHFDFRRYDNLDAYVDDLL 78
Query: 140 VFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINA 181
LD L RC +G + + P+L K ++I A
Sbjct: 79 AILDALRIPRCAFVGHSVSAMIGILASIRRPDLFAKLVLIGA 120
>pdb|2WFM|A Chain A, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|B Chain B, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|C Chain C, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|D Chain D, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
pdb|2WFM|E Chain E, Crystal Structure Of Polyneuridine Aldehyde Esterase
Mutant (H244a)
Length = 264
Score = 28.9 bits (63), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 14/94 (14%)
Query: 5 PCRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINA--PHPA-VFKQELKKMSQLIKTR 61
P + +L+G FGG + ++ YPE + ++ ++A P P +K ++
Sbjct: 76 PPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPAD 135
Query: 62 FLLSRTIGAFHENVHFNFVSAGSPKNPLMLFLHG 95
+L F + G+P+NP M + G
Sbjct: 136 MMLDS-----------QFSTYGNPENPGMSMILG 158
Score = 27.7 bits (60), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 100 WYIWKHQMTEFSHEYWTVAVDIKT---NFRTIADRYFLVDSLKVFLDHLGR----NRCIL 152
WY K + H+ AVD+ N R + + + D + ++ + + +L
Sbjct: 26 WYKLKPLLESAGHK--VTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKVVL 83
Query: 153 IGRDFGGSLVWSFLDKYPELVVKSIIINAPHP 184
+G FGG + ++ YPE + ++ ++A P
Sbjct: 84 LGHSFGGMSLGLAMETYPEKISVAVFMSAMMP 115
>pdb|3GZJ|A Chain A, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|B Chain B, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|C Chain C, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|D Chain D, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
pdb|3GZJ|E Chain E, Crystal Structure Of Polyneuridine Aldehyde Esterase
Complexed With 16-Epi-Vellosimine
Length = 258
Score = 28.9 bits (63), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 21/94 (22%), Positives = 40/94 (42%), Gaps = 14/94 (14%)
Query: 5 PCRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINA--PHPA-VFKQELKKMSQLIKTR 61
P + +L+G FGG + ++ YPE + ++ ++A P P +K ++
Sbjct: 70 PPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPDPNHSLTYPFEKYNEKCPAD 129
Query: 62 FLLSRTIGAFHENVHFNFVSAGSPKNPLMLFLHG 95
+L F + G+P+NP M + G
Sbjct: 130 MMLDS-----------QFSTYGNPENPGMSMILG 152
Score = 27.7 bits (60), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/92 (21%), Positives = 41/92 (44%), Gaps = 9/92 (9%)
Query: 100 WYIWKHQMTEFSHEYWTVAVDIKT---NFRTIADRYFLVDSLKVFLDHLGR----NRCIL 152
WY K + H+ AVD+ N R + + + D + ++ + + +L
Sbjct: 20 WYKLKPLLESAGHK--VTAVDLSAAGINPRRLDEIHTFRDYSEPLMEVMASIPPDEKVVL 77
Query: 153 IGRDFGGSLVWSFLDKYPELVVKSIIINAPHP 184
+G FGG + ++ YPE + ++ ++A P
Sbjct: 78 LGHSFGGMSLGLAMETYPEKISVAVFMSAMMP 109
>pdb|2D0D|A Chain A, Crystal Structure Of A Meta-Cleavage Product Hydrolase
(Cumd) A129v Mutant
Length = 282
Score = 28.1 bits (61), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 25/118 (21%), Positives = 50/118 (42%), Gaps = 17/118 (14%)
Query: 75 VHFNFVSAGSPKNPLMLFLHGFP---ESWYIWKHQMTEFSHEYWTVAVDI--------KT 123
+++ V G P ++ +HG ++ W+ + S Y +A D+
Sbjct: 17 TNYHDVGEGQP----VILIHGSGPGVSAYANWRLTIPALSKFYRVIAPDMVGFGFTDRPE 72
Query: 124 NFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINA 181
N+ D + VD + +D L + ++G FGG L + +Y E V + +++ A
Sbjct: 73 NYNYSKDSW--VDHIIGIMDALEIEKAHIVGNSFGGGLAIATALRYSERVDRMVLMGA 128
>pdb|3OHM|B Chain B, Crystal Structure Of Activated G Alpha Q Bound To Its
Effector Phospholipase C Beta 3
Length = 885
Score = 27.7 bits (60), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 14/81 (17%)
Query: 157 FGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQELRGLIVPKSKKE------GRHDIGES 210
FG +L+ LDKYP + P P+ Q+L G I+ K+KK G G
Sbjct: 432 FGDALLIEPLDKYP------LAPGVPLPS--PQDLMGRILVKNKKRHRPSAGGPDSAGRK 483
Query: 211 QPFRERTFSIQAIRFLTQPQA 231
+P + ++ T+P +
Sbjct: 484 RPLEQSNSALSESSAATEPSS 504
>pdb|3R3U|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3U|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3U|C Chain C, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3U|D Chain D, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtAPO
pdb|3R3Z|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
pdb|3R3Z|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
pdb|3R3Z|C Chain C, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
pdb|3R3Z|D Chain D, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - WtGLYCOLATE
Length = 306
Score = 27.7 bits (60), Expect = 5.5, Method: Compositional matrix adjust.
Identities = 19/104 (18%), Positives = 38/104 (36%), Gaps = 10/104 (9%)
Query: 87 NPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI----------KTNFRTIADRYFLVD 136
P +L LHGFP++ +W + + + + D+ T + +
Sbjct: 33 GPPLLLLHGFPQTHVMWHRVAPKLAERFKVIVADLPGYGWSDMPESDEQHTPYTKRAMAK 92
Query: 137 SLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIIN 180
L ++ LG L G D G + + P + K +++
Sbjct: 93 QLIEAMEQLGHVHFALAGHDRGARVSYRLALDSPGRLSKLAVLD 136
>pdb|3R41|A Chain A, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - His280asnAPO
pdb|3R41|B Chain B, Crystal Structure Of The Fluoroacetate Dehalogenase
Rpa1163 - His280asnAPO
Length = 306
Score = 27.7 bits (60), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 19/104 (18%), Positives = 38/104 (36%), Gaps = 10/104 (9%)
Query: 87 NPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI----------KTNFRTIADRYFLVD 136
P +L LHGFP++ +W + + + + D+ T + +
Sbjct: 33 GPPLLLLHGFPQTHVMWHRVAPKLAERFKVIVADLPGYGWSDMPESDEQHTPYTKRAMAK 92
Query: 137 SLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIIN 180
L ++ LG L G D G + + P + K +++
Sbjct: 93 QLIEAMEQLGHVHFALAGHDRGARVSYRLALDSPGRLSKLAVLD 136
>pdb|3DOH|A Chain A, Crystal Structure Of A Thermostable Esterase
pdb|3DOH|B Chain B, Crystal Structure Of A Thermostable Esterase
pdb|3DOI|A Chain A, Crystal Structure Of A Thermostable Esterase Complex With
Paraoxon
pdb|3DOI|B Chain B, Crystal Structure Of A Thermostable Esterase Complex With
Paraoxon
Length = 380
Score = 27.3 bits (59), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 26/122 (21%), Positives = 45/122 (36%), Gaps = 28/122 (22%)
Query: 86 KNPLMLFLHGFPE-------------SWYIWKHQMTEFSHEYWTVA-------------V 119
K PL++FLHG E +W + H + +A
Sbjct: 173 KYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSWSTLFT 232
Query: 120 DIKTNFRTIADRYFLVDSLKVFLD--HLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSI 177
D + F ++ ++ LD ++ NR + G GG W+ + ++PEL +I
Sbjct: 233 DRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPELFAAAI 292
Query: 178 II 179
I
Sbjct: 293 PI 294
>pdb|4GNK|B Chain B, Crystal Structure Of Galphaq In Complex With Full-length
Human Plcbeta3
pdb|4GNK|D Chain D, Crystal Structure Of Galphaq In Complex With Full-length
Human Plcbeta3
Length = 1235
Score = 27.3 bits (59), Expect = 7.2, Method: Compositional matrix adjust.
Identities = 22/81 (27%), Positives = 35/81 (43%), Gaps = 14/81 (17%)
Query: 157 FGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQELRGLIVPKSKKE------GRHDIGES 210
FG +L+ LDKYP + P P+ Q+L G I+ K+KK G G
Sbjct: 434 FGDALLIEPLDKYP------LAPGVPLPS--PQDLMGRILVKNKKRHRPSAGGPDSAGRK 485
Query: 211 QPFRERTFSIQAIRFLTQPQA 231
+P + ++ T+P +
Sbjct: 486 RPLEQSNSALSESSAATEPSS 506
>pdb|1Z01|A Chain A, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z01|B Chain B, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z01|C Chain C, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z01|D Chain D, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z01|E Chain E, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z01|F Chain F, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z02|A Chain A, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z02|B Chain B, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z02|C Chain C, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z02|D Chain D, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z02|E Chain E, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z02|F Chain F, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z03|A Chain A, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z03|B Chain B, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z03|C Chain C, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z03|D Chain D, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z03|E Chain E, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
pdb|1Z03|F Chain F, 2-Oxoquinoline 8-Monooxygenase Component: Active Site
Modulation By Rieske-[2fe-2s] Center OxidationREDUCTION
Length = 446
Score = 27.3 bits (59), Expect = 7.6, Method: Compositional matrix adjust.
Identities = 27/123 (21%), Positives = 44/123 (35%), Gaps = 37/123 (30%)
Query: 5 PCRNRCILIGRDFGGS---LVWSFLDKYPELVVKSIIINAPHPAVFKQELKKMSQLIKTR 61
P + CI + D G + W F DK+ P + QEL + +K R
Sbjct: 244 PTSDDCIAVVEDDDGPKGMMQWLFTDKWA-------------PVLENQELGLKVEGLKGR 290
Query: 62 FLLSRTIGAFHENVHFNFVSAGSPKNPLMLFLHGFPES---WYIWKHQMTEFSHEYWTVA 118
+ + P +L + +PE Y W +T+ +HEYW +
Sbjct: 291 HYRTSVV------------------LPGVLMVENWPEEHVVQYEWYVPITDDTHEYWEIL 332
Query: 119 VDI 121
V +
Sbjct: 333 VRV 335
>pdb|1XKL|A Chain A, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
pdb|1XKL|B Chain B, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
pdb|1XKL|C Chain C, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
pdb|1XKL|D Chain D, Crystal Structure Of Salicylic Acid-Binding Protein 2
(Sabp2) From Nicotiana Tabacum, Nesg Target Ar2241
Length = 273
Score = 26.9 bits (58), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 9/93 (9%)
Query: 99 SWYIWKHQMTEFSHEYWTVAVDIK---TNFRTIADRYFLVD----SLKVFLDHLGRNRCI 151
SWY K + H+ A+D+ T+ R I + L D ++ + I
Sbjct: 19 SWYKLKPLLEAAGHK--VTALDLAASGTDLRKIEELRTLYDYTLPLXELXESLSADEKVI 76
Query: 152 LIGRDFGGSLVWSFLDKYPELVVKSIIINAPHP 184
L+G GG + +KYP+ + ++ + A P
Sbjct: 77 LVGHSLGGXNLGLAXEKYPQKIYAAVFLAAFXP 109
>pdb|1Y7H|A Chain A, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|B Chain B, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|C Chain C, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|D Chain D, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|E Chain E, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|F Chain F, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|G Chain G, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7H|H Chain H, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7I|A Chain A, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
pdb|1Y7I|B Chain B, Structural And Biochemical Studies Identify Tobacco Sabp2
As A Methylsalicylate Esterase And Further Implicate It
In Plant Innate Immunity, Northeast Structural Genomics
Target Ar2241
Length = 268
Score = 26.9 bits (58), Expect = 9.7, Method: Compositional matrix adjust.
Identities = 22/93 (23%), Positives = 39/93 (41%), Gaps = 9/93 (9%)
Query: 99 SWYIWKHQMTEFSHEYWTVAVDIK---TNFRTIADRYFLVD----SLKVFLDHLGRNRCI 151
SWY K + H+ A+D+ T+ R I + L D ++ + I
Sbjct: 19 SWYKLKPLLEAAGHK--VTALDLAASGTDLRKIEELRTLYDYTLPLXELXESLSADEKVI 76
Query: 152 LIGRDFGGSLVWSFLDKYPELVVKSIIINAPHP 184
L+G GG + +KYP+ + ++ + A P
Sbjct: 77 LVGHSLGGXNLGLAXEKYPQKIYAAVFLAAFXP 109
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.327 0.142 0.448
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 7,117,625
Number of Sequences: 62578
Number of extensions: 290943
Number of successful extensions: 966
Number of sequences better than 100.0: 83
Number of HSP's better than 100.0 without gapping: 51
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 869
Number of HSP's gapped (non-prelim): 116
length of query: 231
length of database: 14,973,337
effective HSP length: 96
effective length of query: 135
effective length of database: 8,965,849
effective search space: 1210389615
effective search space used: 1210389615
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 50 (23.9 bits)