RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy1322
(231 letters)
>2e3j_A Epoxide hydrolase EPHB; epoxide hydrolase B, structural
mycobacterium tuberculosis structural proteomics
project, X hydrolase; 2.10A {Mycobacterium tuberculosis}
PDB: 2zjf_A*
Length = 356
Score = 103 bits (257), Expect = 3e-26
Identities = 35/128 (27%), Positives = 58/128 (45%), Gaps = 10/128 (7%)
Query: 75 VHFNFVSAGSPKN--PLMLFLHGFPESWYIWKHQMTEFS-HEYWTVAVDIK----TNFRT 127
+ V+ P PL++ LHGFPESWY W+HQ+ + Y VA+D + ++
Sbjct: 13 TRIHAVADSPPDQQGPLVVLLHGFPESWYSWRHQIPALAGAGYRVVAIDQRGYGRSSKYR 72
Query: 128 IADRY---FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHP 184
+ Y LV + LD G + ++G D+G + W+F +P+ + I+ P
Sbjct: 73 VQKAYRIKELVGDVVGVLDSYGAEQAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPFA 132
Query: 185 AVFKQELR 192
L
Sbjct: 133 GRGVIGLP 140
Score = 45.8 bits (108), Expect = 4e-06
Identities = 9/43 (20%), Positives = 19/43 (44%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQEL 51
+ ++G D+G + W+F +P+ + I+ P L
Sbjct: 97 QAFVVGHDWGAPVAWTFAWLHPDRCAGVVGISVPFAGRGVIGL 139
>2cjp_A Epoxide hydrolase; HET: PG4 VPR; 1.95A {Solanum tuberosum} PDB:
3cxu_A*
Length = 328
Score = 102 bits (256), Expect = 3e-26
Identities = 28/125 (22%), Positives = 49/125 (39%), Gaps = 14/125 (11%)
Query: 75 VHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFS-HEYWTVAVDI-------KTNFR 126
++ + G P +LF+HGFPE WY W+HQM + Y VA D+
Sbjct: 21 LNMHLAELGE--GPTILFIHGFPELWYSWRHQMVYLAERGYRAVAPDLRGYGDTTGAPLN 78
Query: 127 TIA--DRYFLVDSLKVFLDHLGRN--RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 182
+ LV + L+ + N + ++ D+G + W P+ V + ++
Sbjct: 79 DPSKFSILHLVGDVVALLEAIAPNEEKVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVH 138
Query: 183 HPAVF 187
Sbjct: 139 FSKRN 143
Score = 47.8 bits (114), Expect = 1e-06
Identities = 5/39 (12%), Positives = 14/39 (35%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVF 47
+ ++ D+G + W P+ V + ++
Sbjct: 105 KVFVVAHDWGALIAWHLCLFRPDKVKALVNLSVHFSKRN 143
>1ehy_A Protein (soluble epoxide hydrolase); alpha/beta hydrolase fold,
epoxide degradation, epichlorohydrin; 2.10A
{Agrobacterium tumefaciens} SCOP: c.69.1.11
Length = 294
Score = 99.6 bits (249), Expect = 2e-25
Identities = 29/122 (23%), Positives = 52/122 (42%), Gaps = 11/122 (9%)
Query: 75 VHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI-------KTNFRT 127
V ++V G+ P +L LHG+P W+ W + + Y + D+ K +
Sbjct: 19 VKIHYVREGA--GPTLLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDSEKPDLND 76
Query: 128 IA--DRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPA 185
++ D LD LG + ++G DF ++ F+ KY + V+K+ I + P
Sbjct: 77 LSKYSLDKAADDQAALLDALGIEKAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPD 136
Query: 186 VF 187
Sbjct: 137 FG 138
Score = 41.1 bits (97), Expect = 1e-04
Identities = 10/56 (17%), Positives = 25/56 (44%), Gaps = 1/56 (1%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQELKKMSQLIKTRFLL 64
+ ++G DF ++ F+ KY + V+K+ I + P + + ++ +
Sbjct: 100 KAYVVGHDFAAIVLHKFIRKYSDRVIKAAIFDPIQPDFG-PVYFGLGHVHESWYSQ 154
>3b12_A Fluoroacetate dehalogenase; dehalogease, hydrolase; 1.20A
{Burkholderia SP} PDB: 1y37_A
Length = 304
Score = 96.6 bits (241), Expect = 4e-24
Identities = 30/128 (23%), Positives = 50/128 (39%), Gaps = 12/128 (9%)
Query: 75 VHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI-------KTNFRT 127
V N V GS P +L LHGFP++ ++W ++EY V D+ K
Sbjct: 15 VTINCVVGGS--GPALLLLHGFPQNLHMWARVAPLLANEYTVVCADLRGYGGSSKPVGAP 72
Query: 128 IADRY---FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHP 184
Y + + + LG R L+G GG +P+ V+ +++
Sbjct: 73 DHANYSFRAMASDQRELMRTLGFERFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPT 132
Query: 185 AVFKQELR 192
V +E+
Sbjct: 133 YVMFEEVD 140
Score = 41.5 bits (98), Expect = 1e-04
Identities = 9/43 (20%), Positives = 18/43 (41%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQEL 51
R L+G GG +P+ V+ +++ V +E+
Sbjct: 97 RFHLVGHARGGRTGHRMALDHPDSVLSLAVLDIIPTYVMFEEV 139
>3afi_E Haloalkane dehalogenase; A/B-hydrolase, hydrolase; 1.75A
{Bradyrhizobium japonicum} PDB: 3a2m_A* 3a2n_A 3a2l_A*
Length = 316
Score = 96.2 bits (240), Expect = 7e-24
Identities = 31/144 (21%), Positives = 55/144 (38%), Gaps = 11/144 (7%)
Query: 80 VSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI-------KTNFR-TIADR 131
G+ P++LFLHG P S +IW++ + S +A D+ K + D
Sbjct: 22 RETGAQDAPVVLFLHGNPTSSHIWRNILPLVSPVAHCIAPDLIGFGQSGKPDIAYRFFD- 80
Query: 132 YFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQEL 191
V L F++ G L+ +D+G +L + + P+ V + P Q+
Sbjct: 81 --HVRYLDAFIEQRGVTSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDF 138
Query: 192 RGLIVPKSKKEGRHDIGESQPFRE 215
V + + + FR
Sbjct: 139 HHTEVAEEQDHAEAARAVFRKFRT 162
Score = 37.7 bits (88), Expect = 0.002
Identities = 14/108 (12%), Positives = 30/108 (27%), Gaps = 8/108 (7%)
Query: 8 NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQELKKMSQLIKTRFLLSRT 67
L+ +D+G +L + + P+ V + P Q+ T +
Sbjct: 95 TSAYLVAQDWGTALAFHLAARRPDFVRGLAFMEFIRPMPTWQDFH------HTEVAEEQD 148
Query: 68 IGAFHENVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYW 115
V F + G + M+ + + + E
Sbjct: 149 HAEAARAVFRKFRTPGEGE--AMILEANAFVERVLPGGIVRKLGDEEM 194
>3kda_A CFTR inhibitory factor (CIF); alpha/beta hydrolase, hydrolase;
1.50A {Pseudomonas aeruginosa ucbpp-pa14} PDB: 3kd2_A
3pi6_A
Length = 301
Score = 95.4 bits (238), Expect = 1e-23
Identities = 26/130 (20%), Positives = 47/130 (36%), Gaps = 16/130 (12%)
Query: 75 VHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI---------KTNF 125
V ++V G PL++ +HGF ++WY W M E + + +A D+ KT +
Sbjct: 20 VKLHYVKGGQG--PLVMLVHGFGQTWYEWHQLMPELAKRFTVIAPDLPGLGQSEPPKTGY 77
Query: 126 RTIADRYFLVDSLKVFLDHLGRNRCI-LIGRDFGGSLVWSFLDKYPELVVKSIIINAPHP 184
+ L +R L+ D G + + K + + + + AP P
Sbjct: 78 SGEQ----VAVYLHKLARQFSPDRPFDLVAHDIGIWNTYPMVVKNQADIARLVYMEAPIP 133
Query: 185 AVFKQELRGL 194
Sbjct: 134 DARIYRFPAF 143
Score = 38.8 bits (91), Expect = 7e-04
Identities = 7/45 (15%), Positives = 15/45 (33%)
Query: 12 LIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQELKKMSQ 56
L+ D G + + K + + + + AP P +
Sbjct: 101 LVAHDIGIWNTYPMVVKNQADIARLVYMEAPIPDARIYRFPAFTA 145
>3g9x_A Haloalkane dehalogenase; alpha/beta hydrolase, helical CAP domain,
catalytic triad (A His272, Glu130), mutant, I135F,
haloalkanes; 0.95A {Rhodococcus SP} PDB: 3fwh_A 3fbw_A
3rlt_A 3rk4_A 1bn6_A 1bn7_A 1cqw_A 2v9z_A
Length = 299
Score = 94.6 bits (236), Expect = 2e-23
Identities = 33/153 (21%), Positives = 57/153 (37%), Gaps = 11/153 (7%)
Query: 80 VSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI-------KTNFR-TIADR 131
V G +LFLHG P S Y+W++ + + + +A D+ K + D
Sbjct: 25 VDVGPRDGTPVLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFFDD- 83
Query: 132 YFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQEL 191
V L F++ LG +L+ D+G +L + + + PE V + P E
Sbjct: 84 --HVRYLDAFIEALGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEW 141
Query: 192 RGLIVPKSKKEGRHDIGESQPFRERTFSIQAIR 224
+ D+G + F A+
Sbjct: 142 PEFARETFQAFRTADVGRELIIDQNAFIEGALP 174
Score = 38.4 bits (90), Expect = 0.001
Identities = 13/68 (19%), Positives = 24/68 (35%), Gaps = 3/68 (4%)
Query: 8 NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQELKKMSQLIKTRFLLSRT 67
+L+ D+G +L + + + PE V + P E + + F RT
Sbjct: 98 EEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPFPTWDEWP---EFARETFQAFRT 154
Query: 68 IGAFHENV 75
E +
Sbjct: 155 ADVGRELI 162
>3r40_A Fluoroacetate dehalogenase; FACD, defluorinase, alpha/beta
hydrolase, hydrolase; 1.05A {Rhodopseudomonas palustris}
PDB: 3r3w_A 3r3x_A 3r3v_A 3r3u_A 3r3z_A 3r41_A 3r3y_A
Length = 306
Score = 94.3 bits (235), Expect = 2e-23
Identities = 20/128 (15%), Positives = 41/128 (32%), Gaps = 12/128 (9%)
Query: 75 VHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI-------KTNFRT 127
G P +L LHGFP++ +W + + + + D+
Sbjct: 23 GRIFARVGGD--GPPLLLLHGFPQTHVMWHRVAPKLAERFKVIVADLPGYGWSDMPESDE 80
Query: 128 IADRY---FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHP 184
Y + L ++ LG L G + G + + P + K +++
Sbjct: 81 QHTPYTKRAMAKQLIEAMEQLGHVHFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPT 140
Query: 185 AVFKQELR 192
+ Q +
Sbjct: 141 YEYWQRMN 148
Score = 41.1 bits (97), Expect = 1e-04
Identities = 7/49 (14%), Positives = 17/49 (34%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQELKKMSQL 57
L G + G + + P + K +++ + Q + + L
Sbjct: 105 HFALAGHNRGARVSYRLALDSPGRLSKLAVLDILPTYEYWQRMNRAYAL 153
>3qyj_A ALR0039 protein; alpha/beta fold, hydrolase; 1.78A {Nostoc SP}
Length = 291
Score = 93.8 bits (234), Expect = 4e-23
Identities = 22/128 (17%), Positives = 43/128 (33%), Gaps = 12/128 (9%)
Query: 75 VHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI-------KTNFRT 127
N V AG +L LHG+P++ +W ++ + VA D+ +
Sbjct: 15 ARINLVKAGH--GAPLLLLHGYPQTHVMWHKIAPLLANNFTVVATDLRGYGDSSRPASVP 72
Query: 128 IADRY---FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHP 184
Y + + LG + ++G D G + +P V K +++
Sbjct: 73 HHINYSKRVMAQDQVEVMSKLGYEQFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPT 132
Query: 185 AVFKQELR 192
+
Sbjct: 133 HKMYRTTD 140
Score = 39.5 bits (93), Expect = 4e-04
Identities = 6/43 (13%), Positives = 15/43 (34%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQEL 51
+ ++G D G + +P V K +++ +
Sbjct: 97 QFYVVGHDRGARVAHRLALDHPHRVKKLALLDIAPTHKMYRTT 139
>3qit_A CURM TE, polyketide synthase; thioesterase, alpha/beta hydrolase,
decarboxylase, sulfate elimination, terminal alkene
production; 1.68A {Lyngbya majuscula 19L}
Length = 286
Score = 90.1 bits (224), Expect = 8e-22
Identities = 24/130 (18%), Positives = 45/130 (34%), Gaps = 16/130 (12%)
Query: 75 VHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFS-HEYWTVAVDIKTNFR------- 126
S GSP++P++L +HG E W+ + Y VA D
Sbjct: 14 NQICLCSWGSPEHPVVLCIHGILEQGLAWQEVALPLAAQGYRVVAPD----LFGHGRSSH 69
Query: 127 --TIADRYF--LVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 182
+ + + + L +L+G G L + P+ + + I++ P
Sbjct: 70 LEMVTSYSSLTFLAQIDRVIQELPDQPLLLVGHSMGAMLATAIASVRPKKIKELILVELP 129
Query: 183 HPAVFKQELR 192
PA ++
Sbjct: 130 LPAEESKKES 139
Score = 40.8 bits (96), Expect = 2e-04
Identities = 11/50 (22%), Positives = 23/50 (46%)
Query: 8 NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQELKKMSQL 57
+L+G G L + P+ + + I++ P PA ++ ++QL
Sbjct: 95 QPLLLVGHSMGAMLATAIASVRPKKIKELILVELPLPAEESKKESAVNQL 144
>3i28_A Epoxide hydrolase 2; aromatic hydrocarbons catabolism,
detoxification, magnesium, metal-binding, peroxisome;
HET: 34N; 1.95A {Homo sapiens} PDB: 1s8o_A* 1zd2_P*
1vj5_A* 1zd4_A* 1zd5_A* 3i1y_A* 1zd3_A* 3koo_A* 3otq_A*
1cqz_A 1cr6_A* 1ek1_A* 1ek2_A* 3ans_A* 3ant_A* 3pdc_A*
Length = 555
Score = 89.6 bits (222), Expect = 7e-21
Identities = 39/126 (30%), Positives = 54/126 (42%), Gaps = 10/126 (7%)
Query: 72 HENVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFS-HEYWTVAVDI-------KT 123
V +FV GS P + HGFPESWY W++Q+ + Y +A+D+
Sbjct: 245 KPRVRLHFVELGSG--PAVCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAP 302
Query: 124 NFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPH 183
L + FLD LG ++ + IG D+GG LVW YPE V +N P
Sbjct: 303 PEIEEYCMEVLCKEMVTFLDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPF 362
Query: 184 PAVFKQ 189
Sbjct: 363 IPANPN 368
Score = 45.7 bits (108), Expect = 6e-06
Identities = 14/41 (34%), Positives = 18/41 (43%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQ 49
+ + IG D+GG LVW YPE V +N P
Sbjct: 328 QAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFIPANPN 368
>3u1t_A DMMA haloalkane dehalogenase; alpha/beta-hydrolase, hydrolase;
2.20A {Unidentified}
Length = 309
Score = 87.8 bits (218), Expect = 7e-21
Identities = 27/114 (23%), Positives = 45/114 (39%), Gaps = 12/114 (10%)
Query: 88 PLMLFLHGFPESWYIWKHQMTEF-SHEYWTVAVDI-------KTNFR-TIADRYFLVDSL 138
+LFLHG P S Y+W++ + + Y VA D+ K + + D V +
Sbjct: 30 QPVLFLHGNPTSSYLWRNIIPYVVAAGYRAVAPDLIGMGDSAKPDIEYRLQD---HVAYM 86
Query: 139 KVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQELR 192
F+D LG + +L+ D+G + P+ V + A P
Sbjct: 87 DGFIDALGLDDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPSY 140
Score = 39.3 bits (92), Expect = 5e-04
Identities = 7/44 (15%), Positives = 14/44 (31%)
Query: 8 NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQEL 51
+ +L+ D+G + P+ V + A P
Sbjct: 96 DDMVLVIHDWGSVIGMRHARLNPDRVAAVAFMEALVPPALPMPS 139
>2psd_A Renilla-luciferin 2-monooxygenase; alpha/beta-hydrolase,
luciferase, oxidoreductase; 1.40A {Renilla reniformis}
PDB: 2pse_A 2psj_A* 2psh_A 2psf_A
Length = 318
Score = 86.7 bits (215), Expect = 2e-20
Identities = 18/125 (14%), Positives = 44/125 (35%), Gaps = 13/125 (10%)
Query: 73 ENVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVD---------IKT 123
+ N+ + ++FLHG S Y+W+H + + D
Sbjct: 29 LDSFINYYDSEKHAENAVIFLHGNATSSYLWRHVVPHIEPVARCIIPDLIGMGKSGKSGN 88
Query: 124 NFRTIADRYFLVDSLKVFLDHLGRNR-CILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 182
+ D L + + L + I +G D+G +L + + ++ + + + + +
Sbjct: 89 GSYRLLD---HYKYLTAWFELLNLPKKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESV 145
Query: 183 HPAVF 187
+
Sbjct: 146 VDVIE 150
Score = 36.7 bits (85), Expect = 0.004
Identities = 7/56 (12%), Positives = 23/56 (41%), Gaps = 1/56 (1%)
Query: 8 NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAV-FKQELKKMSQLIKTRF 62
+ I +G D+G +L + + ++ + + + + + + E + + I
Sbjct: 111 KKIIFVGHDWGAALAFHYAYEHQDRIKAIVHMESVVDVIESWDEWPDIEEDIALIK 166
>4f0j_A Probable hydrolytic enzyme; alpha/beta hydrolase fold, structural
genomics, joint center structural genomics, JCSG; HET:
MSE; 1.50A {Pseudomonas aeruginosa}
Length = 315
Score = 86.0 bits (213), Expect = 3e-20
Identities = 26/125 (20%), Positives = 49/125 (39%), Gaps = 9/125 (7%)
Query: 74 NVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFS-HEYWTVAVDI----KTNFRTI 128
++ + V+ +L +HG W+ + + Y +AVD K++ +
Sbjct: 33 SMAYLDVAPKKANGRTILLMHGKNFCAGTWERTIDVLADAGYRVIAVDQVGFCKSS-KPA 91
Query: 129 ADRY---FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPA 185
+Y L + L+ LG R +IG GG L + YP V + +++N
Sbjct: 92 HYQYSFQQLAANTHALLERLGVARASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLE 151
Query: 186 VFKQE 190
+K
Sbjct: 152 DWKAL 156
Score = 41.7 bits (98), Expect = 8e-05
Identities = 11/42 (26%), Positives = 18/42 (42%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQE 50
R +IG GG L + YP V + +++N +K
Sbjct: 115 RASVIGHSMGGMLATRYALLYPRQVERLVLVNPIGLEDWKAL 156
>2xt0_A Haloalkane dehalogenase; hydrolase, alpha-beta hydrolase fold;
1.90A {Plesiocystis pacifica}
Length = 297
Score = 85.2 bits (211), Expect = 5e-20
Identities = 35/161 (21%), Positives = 54/161 (33%), Gaps = 22/161 (13%)
Query: 79 FVSAGS-PKNPLMLFLHGFPESWYIWKHQMTEFSHE-YWTVAVD----------IKTNFR 126
+V G L LHG P ++++ + F+ VA D
Sbjct: 37 YVDEGPRDAEHTFLCLHGEPSWSFLYRKMLPVFTAAGGRVVAPDLFGFGRSDKPTDDAVY 96
Query: 127 TIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAV 186
T SL FLD L R L+ +D+GG L + P+LV + I++N
Sbjct: 97 TFGF---HRRSLLAFLDALQLERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVG 153
Query: 187 FKQELRGLIVPKSKKEGRHDIGESQPFRERTFSIQAIRFLT 227
K + R + S +AI +T
Sbjct: 154 LSP-------GKGFESWRDFVANSPDLDVGKLMQRAIPGIT 187
Score = 40.5 bits (95), Expect = 2e-04
Identities = 13/68 (19%), Positives = 23/68 (33%)
Query: 8 NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQELKKMSQLIKTRFLLSRT 67
R L+ +D+GG L + P+LV + I++N S
Sbjct: 115 ERVTLVCQDWGGILGLTLPVDRPQLVDRLIVMNTALAVGLSPGKGFESWRDFVANSPDLD 174
Query: 68 IGAFHENV 75
+G +
Sbjct: 175 VGKLMQRA 182
>3ibt_A 1H-3-hydroxy-4-oxoquinoline 2,4-dioxygenase; QDO, oxidoreductase;
2.60A {Pseudomonas putida}
Length = 264
Score = 82.5 bits (204), Expect = 3e-19
Identities = 26/148 (17%), Positives = 50/148 (33%), Gaps = 22/148 (14%)
Query: 75 VHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI-----------KT 123
+ +G P P + L G+ + ++K+ + ++ + D
Sbjct: 9 TLMTYSESGDPHAPTLFLLSGWCQDHRLFKNLAPLLARDFHVICPDWRGHDAKQTDSGDF 68
Query: 124 NFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSF-LDKYPELVVKSIIINA- 181
+ +T+A L F+D G ++ G + + K+III+
Sbjct: 69 DSQTLAQD------LLAFIDAKGIRDFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWL 122
Query: 182 --PHPAVFKQELRGLIVPKSKKEGRHDI 207
PHP + Q+L P GR
Sbjct: 123 LQPHPGFW-QQLAEGQHPTEYVAGRQSF 149
Score = 30.2 bits (68), Expect = 0.48
Identities = 9/45 (20%), Positives = 17/45 (37%), Gaps = 4/45 (8%)
Query: 9 RCILIGRDFGGSLVWSF-LDKYPELVVKSIIINA---PHPAVFKQ 49
++ G + + K+III+ PHP ++Q
Sbjct: 88 DFQMVSTSHGCWVNIDVCEQLGAARLPKTIIIDWLLQPHPGFWQQ 132
>1mj5_A 1,3,4,6-tetrachloro-1,4-cyclohexadiene hydrolase; LINB, haloalkane
dehalogenase, 1, 3, 4, 4-cyclohexadiene dehalogenase;
0.95A {Sphingomonas paucimobilis} SCOP: c.69.1.8 PDB:
1cv2_A 1d07_A 2bfn_A 1g42_A* 1g4h_A* 1g5f_A* 1iz7_A
1iz8_A* 1k5p_A 1k63_A 1k6e_A
Length = 302
Score = 82.9 bits (205), Expect = 4e-19
Identities = 29/156 (18%), Positives = 58/156 (37%), Gaps = 13/156 (8%)
Query: 79 FVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI-------KTNFRTIADR 131
++ G+ +LF HG P S Y+W++ M + +A D+ K +
Sbjct: 23 YIDEGT--GDPILFQHGNPTSSYLWRNIMPHCAGLGRLIACDLIGMGDSDKLDPSGPERY 80
Query: 132 YF--LVDSLKVFLDHLG-RNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFK 188
+ D L + L +R +L+ D+G +L + + ++ E V + A +
Sbjct: 81 AYAEHRDYLDALWEALDLGDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEW 140
Query: 189 QELRGLIVPKSKKEGRHDIGESQPFRERTFSIQAIR 224
+ + R GE ++ F Q +
Sbjct: 141 ADFPEQDRDLF-QAFRSQAGEELVLQDNVFVEQVLP 175
Score = 36.3 bits (84), Expect = 0.005
Identities = 9/56 (16%), Positives = 24/56 (42%)
Query: 7 RNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQELKKMSQLIKTRF 62
+R +L+ D+G +L + + ++ E V + A + + + + + F
Sbjct: 99 GDRVVLVVHDWGSALGFDWARRHRERVQGIAYMEAIAMPIEWADFPEQDRDLFQAF 154
>2qvb_A Haloalkane dehalogenase 3; RV2579, alpha-beta hydrolase protei
structural genomics consortium, TBSGC, hydrolase; 1.19A
{Mycobacterium tuberculosis} PDB: 2o2i_A 2o2h_A
Length = 297
Score = 81.7 bits (202), Expect = 1e-18
Identities = 28/156 (17%), Positives = 55/156 (35%), Gaps = 13/156 (8%)
Query: 79 FVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI-------KTNFRTIADR 131
++ G ++F HG P S Y+W++ M VA D+ K +
Sbjct: 22 YIDEGK--GDAIVFQHGNPTSSYLWRNIMPHLEGLGRLVACDLIGMGASDKLSPSGPDRY 79
Query: 132 YF--LVDSLKVFLDHLG-RNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFK 188
+ D L D L + +L+ D+G +L + + +++ + V + A +
Sbjct: 80 SYGEQRDFLFALWDALDLGDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTW 139
Query: 189 QELRGLIVPKSKKEGRHDIGESQPFRERTFSIQAIR 224
+ V + R GE F + +
Sbjct: 140 ADWPP-AVRGVFQGFRSPQGEPMALEHNIFVERVLP 174
Score = 36.2 bits (84), Expect = 0.006
Identities = 9/73 (12%), Positives = 27/73 (36%), Gaps = 3/73 (4%)
Query: 7 RNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQELKKMSQLIKTRFLLSR 66
+ +L+ D+G +L + + +++ + V + A + + ++ F R
Sbjct: 98 GDHVVLVLHDWGSALGFDWANQHRDRVQGIAFMEAIVTPMTWAD---WPPAVRGVFQGFR 154
Query: 67 TIGAFHENVHFNF 79
+ + N
Sbjct: 155 SPQGEPMALEHNI 167
>3oos_A Alpha/beta hydrolase family protein; APC67239.0, protein structure
initiative, PSI-2, structural midwest center for
structural genomics, MCSG; HET: MSE PG4; 1.65A {Bacillus
anthracis}
Length = 278
Score = 77.8 bits (192), Expect = 2e-17
Identities = 20/135 (14%), Positives = 40/135 (29%), Gaps = 15/135 (11%)
Query: 74 NVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI----------KT 123
F + G P + H + E F+ Y V++
Sbjct: 12 RGKFEYFLKGE--GPPLCVTHLYSEYNDNGNTFANPFTDHYSVYLVNLKGCGNSDSAKND 69
Query: 124 NFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPH 183
+ ++ + + L+ + L N+ G GG L + + E + K I+ A
Sbjct: 70 SEYSMTE---TIKDLEAIREALYINKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAA 126
Query: 184 PAVFKQELRGLIVPK 198
+ + K
Sbjct: 127 SKEYASHKDSIYCSK 141
Score = 40.0 bits (94), Expect = 3e-04
Identities = 18/142 (12%), Positives = 38/142 (26%), Gaps = 16/142 (11%)
Query: 8 NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQELKKMSQLIKTRFLLSRT 67
N+ G GG L + + E + K I+ A + + ++ +
Sbjct: 91 NKWGFAGHSAGGMLALVYATEAQESLTKIIVGGAAASKEYASH---KDSIYCSKNVKFNR 147
Query: 68 IGAFHENVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRT 127
I + A + + + W + E E + +
Sbjct: 148 IVSIMN--------ALNDDSTVQEERKALSREWALMSFYSEEKLEEA--LKLPNSGKTVG 197
Query: 128 IADRYFLVDSLKVFLDHLGRNR 149
YF + D+ R +
Sbjct: 198 NRLNYF---RQVEYKDYDVRQK 216
>1b6g_A Haloalkane dehalogenase; hydrolase, alpha/beta-hydrolase; 1.15A
{Xanthobacter autotrophicus} SCOP: c.69.1.8 PDB: 1be0_A
1cij_A 2yxp_X 1edd_A 1edb_A 2dhc_A 2dhe_A 2eda_A 2edc_A
2had_A 1ede_A 2pky_X 1bez_A 1bee_A 2dhd_A* 1hde_A
Length = 310
Score = 77.9 bits (192), Expect = 3e-17
Identities = 25/116 (21%), Positives = 47/116 (40%), Gaps = 9/116 (7%)
Query: 79 FVSAGSP-KNPLMLFLHGFPESWYIWKHQMTEFS-HEYWTVAVDI----KTNFRTIADRY 132
++ G+ + L LHG P Y+++ + F+ +A D K++ + Y
Sbjct: 38 YLDEGNSDAEDVFLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDY 97
Query: 133 ---FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPA 185
F + L ++ L L+ +D+GG L + P + II+NA
Sbjct: 98 TFEFHRNFLLALIERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMT 153
Score = 36.7 bits (85), Expect = 0.003
Identities = 14/82 (17%), Positives = 27/82 (32%), Gaps = 3/82 (3%)
Query: 8 NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINA--PHPAVFKQELKKMSQLIKTRFLLS 65
L+ +D+GG L + P + II+NA V + F
Sbjct: 116 RNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNAXLMTDPVTQPAFSAFVTQPADGFTAW 175
Query: 66 RTIGAFHENVHFN-FVSAGSPK 86
+ ++ + F+ +P
Sbjct: 176 KYDLVTPSDLRLDQFMKRWAPT 197
>3kxp_A Alpha-(N-acetylaminomethylene)succinic acid hydrolase; alpha/beta
hydrolase, PLP degradation, E-2-
(acetamidomethylene)succinate; 2.26A {Mesorhizobium
loti}
Length = 314
Score = 75.5 bits (186), Expect = 2e-16
Identities = 31/121 (25%), Positives = 45/121 (37%), Gaps = 17/121 (14%)
Query: 75 VHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI-------KTNFRT 127
+ N GS PLMLF HG + +++ M S + T+AVD K
Sbjct: 58 ITLNVREKGS--GPLMLFFHGITSNSAVFEPLMIRLSDRFTTIAVDQRGHGLSDKP---- 111
Query: 128 IADRY---FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHP 184
Y D + + L R IL+G G + KYP+LV + I+
Sbjct: 112 -ETGYEANDYADDIAGLIRTLARGHAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPY 170
Query: 185 A 185
Sbjct: 171 I 171
Score = 32.0 bits (73), Expect = 0.13
Identities = 10/37 (27%), Positives = 15/37 (40%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPA 45
IL+G G + KYP+LV + I+
Sbjct: 135 HAILVGHSLGARNSVTAAAKYPDLVRSVVAIDFTPYI 171
>1brt_A Bromoperoxidase A2; haloperoxidase, oxidoreductase, alpha/beta
hydrolase fold, mutant M99T; 1.50A {Streptomyces
aureofaciens} SCOP: c.69.1.12 PDB: 1bro_A 1a8u_A 1a7u_A
Length = 277
Score = 73.1 bits (180), Expect = 1e-15
Identities = 21/117 (17%), Positives = 37/117 (31%), Gaps = 21/117 (17%)
Query: 88 PLMLFLHGFPESWYIWKHQMTEF-SHEYWTVAVDIKTNFR------------TIADRYFL 134
++ +HGFP S + W+ Q Y + D R
Sbjct: 24 QPVVLIHGFPLSGHSWERQSAALLDAGYRVITYD----RRGFGQSSQPTTGYDYDT---F 76
Query: 135 VDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKY-PELVVKSIIINAPHPAVFKQE 190
L L+ L +L+G G V ++ Y + K + + P + K +
Sbjct: 77 AADLNTVLETLDLQDAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTD 133
Score = 34.2 bits (79), Expect = 0.021
Identities = 8/43 (18%), Positives = 17/43 (39%), Gaps = 1/43 (2%)
Query: 9 RCILIGRDFGGSLVWSFLDKY-PELVVKSIIINAPHPAVFKQE 50
+L+G G V ++ Y + K + + P + K +
Sbjct: 91 DAVLVGFSTGTGEVARYVSSYGTARIAKVAFLASLEPFLLKTD 133
>2wue_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrolase BPHD; HET: KEK;
1.80A {Mycobacterium tuberculosis} PDB: 2wud_A* 2wuf_A*
2wug_A* 2vf2_A
Length = 291
Score = 72.7 bits (179), Expect = 2e-15
Identities = 23/118 (19%), Positives = 42/118 (35%), Gaps = 13/118 (11%)
Query: 75 VHFNFVSAGSPKNPLMLFLHGFP---ESWYIWKHQMTEFSHEYWTVAVDI--------KT 123
+ ++ AG + ++ LHG SW + + + + +AVD +
Sbjct: 24 LKLHYHEAGVGNDQTVVLLHGGGPGAASWTNFSRNIAVLARHFHVLAVDQPGYGHSDKRA 83
Query: 124 NFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINA 181
+ +LK D LG R L+G GG F YP + +++
Sbjct: 84 EHGQFNR--YAAMALKGLFDQLGLGRVPLVGNALGGGTAVRFALDYPARAGRLVLMGP 139
Score = 30.4 bits (69), Expect = 0.49
Identities = 8/33 (24%), Positives = 13/33 (39%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINA 41
R L+G GG F YP + +++
Sbjct: 107 RVPLVGNALGGGTAVRFALDYPARAGRLVLMGP 139
>2wj6_A 1H-3-hydroxy-4-oxoquinaldine 2,4-dioxygenase; oxidoreductase,
alpha/beta hydrolase; HET: ZZ8 SRT; 2.00A {Arthrobacter
nitroguajacolicus} PDB: 2wj4_A* 2wj3_A* 2wm2_A*
Length = 276
Score = 70.6 bits (173), Expect = 8e-15
Identities = 28/145 (19%), Positives = 54/145 (37%), Gaps = 25/145 (17%)
Query: 82 AGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFR------------TIA 129
P +L L G+ ++K+ + E ++ + + +R
Sbjct: 22 QRDTDGPAILLLPGWCHDHRVYKYLIQELDADFRVIVPN----WRGHGLSPSEVPDFGYQ 77
Query: 130 DRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKY-PELVVKSIIIN----APHP 184
+ V LD LG + + GG ++ L++ PE + II++ AP P
Sbjct: 78 E---QVKDALEILDQLGVETFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKP 134
Query: 185 AVFKQELRGLIVPKSKKEGRHDIGE 209
+ L L P+ +EG H + +
Sbjct: 135 DFA-KSLTLLKDPERWREGTHGLFD 158
Score = 31.7 bits (72), Expect = 0.18
Identities = 26/152 (17%), Positives = 48/152 (31%), Gaps = 35/152 (23%)
Query: 9 RCILIGRDFGGSLVWSFLDKY-PELVVKSIIIN----APHPAVFKQELKKMSQLIKTRFL 63
+ + GG ++ L++ PE + II++ AP P K L+K
Sbjct: 94 TFLPVSHSHGGWVLVELLEQAGPERAPRGIIMDWLMWAPKPDFAKSL-----TLLKDPER 148
Query: 64 LSRTIGAFHENVHFNFVSAGSPKNPLMLFLHGFPESWYIW--KHQMTEFSHEYWTVAVDI 121
+ ++L G E +M ++ ++ W +
Sbjct: 149 WREGTHGLFD-----------------VWLDGHDEKRVRHHLLEEMADYGYDCWGRSG-- 189
Query: 122 KTNFRTIADRYFLVDSLKVFLDHLGRNRCILI 153
R I D Y S + +L + R I
Sbjct: 190 ----RVIEDAYGRNGSPMQMMANLTKTRPIRH 217
>1a88_A Chloroperoxidase L; haloperoxidase, oxidoreductase; 1.90A
{Streptomyces lividans} SCOP: c.69.1.12
Length = 275
Score = 70.4 bits (173), Expect = 9e-15
Identities = 29/140 (20%), Positives = 51/140 (36%), Gaps = 21/140 (15%)
Query: 74 NVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEF-SHEYWTVAVDIKTNFR------ 126
+ + G ++F HG+P S W +QM F SH Y +A D R
Sbjct: 8 GTNIFYKDWGPRDGLPVVFHHGWPLSADDWDNQMLFFLSHGYRVIAHD----RRGHGRSD 63
Query: 127 ------TIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKY-PELVVKSIII 179
+ + + L + IG GG V ++ + P V K++++
Sbjct: 64 QPSTGHDMDT---YAADVAALTEALDLRGAVHIGHSTGGGEVARYVARAEPGRVAKAVLV 120
Query: 180 NAPHPAVFKQELRGLIVPKS 199
+A P + K + +P
Sbjct: 121 SAVPPVMVKSDTNPDGLPLE 140
Score = 30.7 bits (70), Expect = 0.37
Identities = 11/43 (25%), Positives = 22/43 (51%), Gaps = 1/43 (2%)
Query: 9 RCILIGRDFGGSLVWSFLDKY-PELVVKSIIINAPHPAVFKQE 50
+ IG GG V ++ + P V K+++++A P + K +
Sbjct: 89 GAVHIGHSTGGGEVARYVARAEPGRVAKAVLVSAVPPVMVKSD 131
>3l80_A Putative uncharacterized protein SMU.1393C; alpha/beta hydrolase
fold, carboxylesterase, Ser- hydrolase; 2.00A
{Streptococcus mutans}
Length = 292
Score = 70.8 bits (173), Expect = 9e-15
Identities = 14/134 (10%), Positives = 41/134 (30%), Gaps = 14/134 (10%)
Query: 82 AGSPKNPLMLFLHGF--PESWYIWKHQMTEFSHEYWTVAVDI---------KTNFRTIAD 130
NP +FL G + + + + + + +D + D
Sbjct: 36 CHREGNPCFVFLSGAGFFSTADNFANIIDKLPDSIGILTIDAPNSGYSPVSNQANVGLRD 95
Query: 131 RYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQE 190
V+++ + +H +L GG +++ + + I + +++
Sbjct: 96 ---WVNAILMIFEHFKFQSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAG 152
Query: 191 LRGLIVPKSKKEGR 204
+ P+ +
Sbjct: 153 FSSDLYPQLALRRQ 166
Score = 36.9 bits (85), Expect = 0.003
Identities = 4/47 (8%), Positives = 14/47 (29%)
Query: 8 NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQELKKM 54
+L GG +++ + + I + +++
Sbjct: 110 QSYLLCVHSIGGFAALQIMNQSSKACLGFIGLEPTTVMIYRAGFSSD 156
>1iup_A META-cleavage product hydrolase; aromatic compounds, cumene,
isopropylbenzene, META-cleavage compound hydrolase;
1.60A {Pseudomonas fluorescens} SCOP: c.69.1.10 PDB:
1iun_A 1iuo_A 1uk6_A 1uk7_A 1uk8_A 1uk9_A 1uka_A 1ukb_A
2d0d_A
Length = 282
Score = 69.7 bits (171), Expect = 2e-14
Identities = 29/138 (21%), Positives = 54/138 (39%), Gaps = 20/138 (14%)
Query: 54 MSQLIKTRFLLSRTIGAFHENVHFNFVSAGSPKNPLMLFLHGFP---ESWYIWKHQMTEF 110
M+ L + +L V N+ G ++ +HG ++ W+ +
Sbjct: 1 MANLEIGKSIL-------AAGVLTNYHDVGE--GQPVILIHGSGPGVSAYANWRLTIPAL 51
Query: 111 SHEYWTVAVDI----KTNFRTIADRY---FLVDSLKVFLDHLGRNRCILIGRDFGGSLVW 163
S Y +A D+ T+ R Y VD + +D L + ++G FGG L
Sbjct: 52 SKFYRVIAPDMVGFGFTD-RPENYNYSKDSWVDHIIGIMDALEIEKAHIVGNAFGGGLAI 110
Query: 164 SFLDKYPELVVKSIIINA 181
+ +Y E V + +++ A
Sbjct: 111 ATALRYSERVDRMVLMGA 128
Score = 35.8 bits (83), Expect = 0.007
Identities = 11/64 (17%), Positives = 25/64 (39%), Gaps = 1/64 (1%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIIN-APHPAVFKQELKKMSQLIKTRFLLSRT 67
+ ++G FGG L + +Y E V + +++ A + L + + +
Sbjct: 96 KAHIVGNAFGGGLAIATALRYSERVDRMVLMGAAGTRFDVTEGLNAVWGYTPSIENMRNL 155
Query: 68 IGAF 71
+ F
Sbjct: 156 LDIF 159
>3vdx_A Designed 16NM tetrahedral protein CAGE containing bromoperoxidase
BPO-A2 and matrix...; protein design, bionanotechnology;
3.00A {Streptomyces aureofaciens} PDB: 4d9j_A
Length = 456
Score = 69.8 bits (171), Expect = 4e-14
Identities = 20/117 (17%), Positives = 36/117 (30%), Gaps = 21/117 (17%)
Query: 88 PLMLFLHGFPESWYIWKHQMTEF-SHEYWTVAVDIKTNFR------------TIADRYFL 134
++ +HGFP S + W+ Q Y + D R
Sbjct: 25 VPVVLIHGFPLSGHSWERQSAALLDAGYRVITYD----RRGFGQSSQPTTGYDYDT---F 77
Query: 135 VDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKY-PELVVKSIIINAPHPAVFKQE 190
L L+ L +L+G G V ++ Y + + + P + K +
Sbjct: 78 AADLNTVLETLDLQDAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTD 134
Score = 32.9 bits (75), Expect = 0.077
Identities = 7/43 (16%), Positives = 16/43 (37%), Gaps = 1/43 (2%)
Query: 9 RCILIGRDFGGSLVWSFLDKY-PELVVKSIIINAPHPAVFKQE 50
+L+G G V ++ Y + + + P + K +
Sbjct: 92 DAVLVGFSMGTGEVARYVSSYGTARIAAVAFLASLEPFLLKTD 134
>3bdi_A Uncharacterized protein TA0194; NP_393672.1, predicted CIB-like
hydrolase, structural genomi center for structural
genomics; HET: MSE; 1.45A {Thermoplasma acidophilum dsm
1728}
Length = 207
Score = 67.2 bits (164), Expect = 6e-14
Identities = 24/145 (16%), Positives = 47/145 (32%), Gaps = 13/145 (8%)
Query: 74 NVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMT--EFS-HEYWTVAVDI--------- 121
V + S + + HG+ + W +S Y A D
Sbjct: 15 RVFQRKMVTDSNR-RSIALFHGYSFTSMDWDKADLFNNYSKIGYNVYAPDYPGFGRSASS 73
Query: 122 KTNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINA 181
+ D + ++ +L G R +++G GG +V +YP++V I +
Sbjct: 74 EKYGIDRGDLKHAAEFIRDYLKANGVARSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAP 133
Query: 182 PHPAVFKQELRGLIVPKSKKEGRHD 206
K +++ + G D
Sbjct: 134 AWVESLKGDMKKIRQKTLLVWGSKD 158
Score = 31.4 bits (71), Expect = 0.17
Identities = 10/43 (23%), Positives = 20/43 (46%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQEL 51
R +++G GG +V +YP++V I + K ++
Sbjct: 101 RSVIMGASMGGGMVIMTTLQYPDIVDGIIAVAPAWVESLKGDM 143
>1c4x_A BPHD, protein (2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoat hydrolase);
PCB degradation; 2.40A {Rhodococcus SP} SCOP: c.69.1.10
Length = 285
Score = 68.1 bits (167), Expect = 7e-14
Identities = 20/120 (16%), Positives = 48/120 (40%), Gaps = 13/120 (10%)
Query: 78 NFVSAGSPKNPLMLFLHGFPE---SWYIWKHQMTEFSHEYWTVAVDI-------KTNFRT 127
+ + AG P++P ++ LHG + W+ + + + ++ VA D+
Sbjct: 20 HALVAGDPQSPAVVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPDLIGFGQSEYPETYP 79
Query: 128 IADRY---FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHP 184
V+ + ++H G + ++G GG++ + + PE K ++ +
Sbjct: 80 GHIMSWVGMRVEQILGLMNHFGIEKSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGA 139
Score = 26.5 bits (59), Expect = 7.8
Identities = 6/36 (16%), Positives = 16/36 (44%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHP 44
+ ++G GG++ + + PE K ++ +
Sbjct: 104 KSHIVGNSMGGAVTLQLVVEAPERFDKVALMGSVGA 139
>2xmz_A Hydrolase, alpha/beta hydrolase fold family; menaquinone
biosynthesis, lyase; 1.94A {Staphylococcus aureus}
Length = 269
Score = 67.3 bits (165), Expect = 1e-13
Identities = 20/116 (17%), Positives = 37/116 (31%), Gaps = 12/116 (10%)
Query: 75 VHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVD---------IKTNF 125
H+ F A N +++FLHGF + + + +F+ Y + +D
Sbjct: 4 THYKFYEANVETNQVLVFLHGFLSDSRTYHNHIEKFTDNYHVITIDLPGHGEDQSSMDET 63
Query: 126 RTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINA 181
+ L LD L G GG + + + I+ +
Sbjct: 64 WNFDY---ITTLLDRILDKYKDKSITLFGYSMGGRVALYYAINGHIPISNLILEST 116
>1hkh_A Gamma lactamase; hydrolase, alpha/beta hydrolase, CO-factor free
haloperoxidase,; 1.73A {Microbacterium} SCOP: c.69.1.12
PDB: 1hl7_A*
Length = 279
Score = 66.3 bits (162), Expect = 3e-13
Identities = 22/112 (19%), Positives = 44/112 (39%), Gaps = 11/112 (9%)
Query: 88 PLMLFLHGFPESWYIWKHQMTEF-SHEYWTVAVDI-------KTNFRTIADRYFLVDSLK 139
++ +HG+P + W+ Q E + Y + D K N D + L
Sbjct: 24 QPVVLIHGYPLDGHSWERQTRELLAQGYRVITYDRRGFGGSSKVNTGYDYDTF--AADLH 81
Query: 140 VFLDHLGRNRCILIGRDFGGSLVWSFLDKY-PELVVKSIIINAPHPAVFKQE 190
L+ L +L+G G + ++ +Y E V K + + P + +++
Sbjct: 82 TVLETLDLRDVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRD 133
Score = 32.4 bits (74), Expect = 0.099
Identities = 8/43 (18%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 9 RCILIGRDFGGSLVWSFLDKY-PELVVKSIIINAPHPAVFKQE 50
+L+G G + ++ +Y E V K + + P + +++
Sbjct: 91 DVVLVGFSMGTGELARYVARYGHERVAKLAFLASLEPFLVQRD 133
>1imj_A CIB, CCG1-interacting factor B; alpha/beta hydrolase, CCG1
interactor; 2.20A {Homo sapiens} SCOP: c.69.1.23
Length = 210
Score = 64.6 bits (157), Expect = 6e-13
Identities = 25/140 (17%), Positives = 41/140 (29%), Gaps = 14/140 (10%)
Query: 54 MSQLIKTRFLLSRTIGAFHENVHFNFVSAGS-PKNPLMLFLHGFPESWYIWKHQMTE--- 109
M+ ++ R TI + + F GS +L LHG S W++ T
Sbjct: 1 MAASVEQR---EGTIQVQGQALFFREALPGSGQARFSVLLLHGIRFSSETWQNLGTLHRL 57
Query: 110 FSHEYWTVAVD-------IKTNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLV 162
Y VA+D + L +D L ++I G
Sbjct: 58 AQAGYRAVAIDLPGLGHSKEAAAPAPIGELAPGSFLAAVVDALELGPPVVISPSLSGMYS 117
Query: 163 WSFLDKYPELVVKSIIINAP 182
FL + + +
Sbjct: 118 LPFLTAPGSQLPGFVPVAPI 137
Score = 33.4 bits (76), Expect = 0.041
Identities = 4/34 (11%), Positives = 9/34 (26%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 42
++I G FL + + +
Sbjct: 104 PPVVISPSLSGMYSLPFLTAPGSQLPGFVPVAPI 137
>1u2e_A 2-hydroxy-6-ketonona-2,4-dienedioic acid hydrolase; alpha/beta
hydrolase fold; 2.10A {Escherichia coli}
Length = 289
Score = 64.7 bits (158), Expect = 1e-12
Identities = 29/142 (20%), Positives = 50/142 (35%), Gaps = 17/142 (11%)
Query: 54 MSQLIKTRFLLSR--TIGAFHENVHFNFVSAGSPKNPLMLFLHGFP---ESWYIWKHQMT 108
MS +T SR + + + +F G + + LHG W + +
Sbjct: 2 MSYQPQTEAATSRFLNVEEAGKTLRIHFNDCGQGDETV-VLLHGSGPGATGWANFSRNID 60
Query: 109 EF-SHEYWTVAVDI--------KTNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGG 159
Y + +D N + +D LK +D L + L+G GG
Sbjct: 61 PLVEAGYRVILLDCPGWGKSDSVVNSGSRSDLN--ARILKSVVDQLDIAKIHLLGNSMGG 118
Query: 160 SLVWSFLDKYPELVVKSIIINA 181
+F K+PE V K +++
Sbjct: 119 HSSVAFTLKWPERVGKLVLMGG 140
Score = 31.2 bits (71), Expect = 0.23
Identities = 10/33 (30%), Positives = 17/33 (51%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINA 41
+ L+G GG +F K+PE V K +++
Sbjct: 108 KIHLLGNSMGGHSSVAFTLKWPERVGKLVLMGG 140
>3fob_A Bromoperoxidase; structural genomics, IDP00046, bacillus ANT
peroxidase, oxidoreductase; 1.74A {Bacillus anthracis
str}
Length = 281
Score = 64.0 bits (156), Expect = 2e-12
Identities = 23/112 (20%), Positives = 42/112 (37%), Gaps = 11/112 (9%)
Query: 88 PLMLFLHGFPESWYIWKHQMTEFS-HEYWTVAVDI-------KTNFRTIADRYFLVDSLK 139
++ +HG+P S W++Q+ Y + D + D + L
Sbjct: 28 KPVVLIHGWPLSGRSWEYQVPALVEAGYRVITYDRRGFGKSSQPWEGYEYDTF--TSDLH 85
Query: 140 VFLDHLGRNRCILIGRDFGGSLVWSFLDKY-PELVVKSIIINAPHPAVFKQE 190
L+ L L+G GG V ++ Y + + K + A P ++K E
Sbjct: 86 QLLEQLELQNVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSE 137
Score = 32.0 bits (73), Expect = 0.14
Identities = 11/43 (25%), Positives = 19/43 (44%), Gaps = 1/43 (2%)
Query: 9 RCILIGRDFGGSLVWSFLDKY-PELVVKSIIINAPHPAVFKQE 50
L+G GG V ++ Y + + K + A P ++K E
Sbjct: 95 NVTLVGFSMGGGEVARYISTYGTDRIEKVVFAGAVPPYLYKSE 137
>1j1i_A META cleavage compound hydrolase; carbazole degradation, META
cleavage product hydrolase, histidine tagged protein,
alpha/beta-hydrolase; 1.86A {Janthinobacterium} SCOP:
c.69.1.10
Length = 296
Score = 63.5 bits (155), Expect = 3e-12
Identities = 19/117 (16%), Positives = 45/117 (38%), Gaps = 15/117 (12%)
Query: 77 FNFVSAGSPKNPLMLFLHGFP---ESWYIWKHQMTEFSHEYWTVAVDI-------KTNFR 126
++ AG ++ +HG ES W++ + + Y +A+D+ K +
Sbjct: 28 TRYLEAGKG--QPVILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGKTAKPDIE 85
Query: 127 TIADRYFLVDSLKVFLDHLG-RNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 182
+ + L F+ + + ++G GG+ + ELV +++ +
Sbjct: 86 Y--TQDRRIRHLHDFIKAMNFDGKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSA 140
Score = 30.4 bits (69), Expect = 0.41
Identities = 6/35 (17%), Positives = 15/35 (42%)
Query: 8 NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 42
+ ++G GG+ + ELV +++ +
Sbjct: 106 GKVSIVGNSMGGATGLGVSVLHSELVNALVLMGSA 140
>2r11_A Carboxylesterase NP; 2632844, putative hydrolase, structural
genomics, joint center for structural genomics, JCSG;
HET: MSE PGE; 1.96A {Bacillus subtilis}
Length = 306
Score = 63.5 bits (155), Expect = 3e-12
Identities = 36/149 (24%), Positives = 59/149 (39%), Gaps = 15/149 (10%)
Query: 65 SRTIGAFHENVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI--- 121
S I H +++G P ++ LHG S +W + ++S +Y T AVDI
Sbjct: 47 SFYISTRFGQTHV--IASGPEDAPPLVLLHGALFSSTMWYPNIADWSSKYRTYAVDIIGD 104
Query: 122 ------KTNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVK 175
+ T D + L D+LG + +IG GG +FL + PE V
Sbjct: 105 KNKSIPENVSGTRTD---YANWLLDVFDNLGIEKSHMIGLSLGGLHTMNFLLRMPERVKS 161
Query: 176 SIIIN-APHPAVFKQELRGLIVPKSKKEG 203
+ I++ A F + + + G
Sbjct: 162 AAILSPAETFLPFHHDFYKYALGLTASNG 190
>1zoi_A Esterase; alpha/beta hydrolase fold; 1.60A {Pseudomonas putida}
PDB: 4dgq_A
Length = 276
Score = 63.1 bits (154), Expect = 4e-12
Identities = 30/120 (25%), Positives = 47/120 (39%), Gaps = 20/120 (16%)
Query: 83 GSPKNPLMLFLHGFPESWYIWKHQMTEF-SHEYWTVAVDIKTNFR------------TIA 129
G P++ F HG+P S W Q+ F +H Y VA D R +
Sbjct: 18 GPRDAPVIHFHHGWPLSADDWDAQLLFFLAHGYRVVAHD----RRGHGRSSQVWDGHDMD 73
Query: 130 DRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQ 189
D + + HLG + +G GG V ++ ++PE V ++ A P + Q
Sbjct: 74 H---YADDVAAVVAHLGIQGAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQ 130
Score = 29.5 bits (67), Expect = 0.67
Identities = 10/41 (24%), Positives = 19/41 (46%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQ 49
+ +G GG V ++ ++PE V ++ A P + Q
Sbjct: 90 GAVHVGHSTGGGEVVRYMARHPEDKVAKAVLIAAVPPLMVQ 130
>1a8s_A Chloroperoxidase F; haloperoxidase, oxidoreductase, propionate
complex; 1.80A {Pseudomonas fluorescens} SCOP: c.69.1.12
Length = 273
Score = 62.7 bits (153), Expect = 5e-12
Identities = 28/112 (25%), Positives = 47/112 (41%), Gaps = 11/112 (9%)
Query: 88 PLMLFLHGFPESWYIWKHQMTEFS-HEYWTVAVDI-------KTNFRTIADRYFLVDSLK 139
++F HG+P + W+ QM + Y +A D + D Y D L
Sbjct: 20 QPIVFSHGWPLNADSWESQMIFLAAQGYRVIAHDRRGHGRSSQPWSGNDMDTY--ADDLA 77
Query: 140 VFLDHLGRNRCILIGRDFGGSLVWSFLDKY-PELVVKSIIINAPHPAVFKQE 190
++HL +L G GG V ++ ++ V K+ +I+A P + K E
Sbjct: 78 QLIEHLDLRDAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTE 129
Score = 30.4 bits (69), Expect = 0.43
Identities = 12/43 (27%), Positives = 21/43 (48%), Gaps = 1/43 (2%)
Query: 9 RCILIGRDFGGSLVWSFLDKY-PELVVKSIIINAPHPAVFKQE 50
+L G GG V ++ ++ V K+ +I+A P + K E
Sbjct: 87 DAVLFGFSTGGGEVARYIGRHGTARVAKAGLISAVPPLMLKTE 129
>3fsg_A Alpha/beta superfamily hydrolase; PF00561, MCSG, PSI, PSI-2,
structural genomics, protein structure initiative,
midwest for structural genomics; 2.00A {Oenococcus oeni}
Length = 272
Score = 62.4 bits (152), Expect = 6e-12
Identities = 21/140 (15%), Positives = 40/140 (28%), Gaps = 27/140 (19%)
Query: 70 AFHENVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRTIA 129
+ + ++ S GS ++FLHG S+ ++ I
Sbjct: 6 EYLTRSNISYFSIGS--GTPIIFLHGLSLDKQSTCLFFEPLSN---------VGQYQRIY 54
Query: 130 ----------------DRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELV 173
L ++ + +G R IL G +GG L + +
Sbjct: 55 LDLPGMGNSDPISPSTSDNVLETLIEAIEEIIGARRFILYGHSYGGYLAQAIAFHLKDQT 114
Query: 174 VKSIIINAPHPAVFKQELRG 193
+ + A + L G
Sbjct: 115 LGVFLTCPVITADHSKRLTG 134
Score = 29.7 bits (67), Expect = 0.62
Identities = 11/72 (15%), Positives = 20/72 (27%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQELKKMSQLIKTRFLLSRTI 68
R IL G +GG L + + + + A + L I +
Sbjct: 90 RFILYGHSYGGYLAQAIAFHLKDQTLGVFLTCPVITADHSKRLTGKHINILEEDINPVEN 149
Query: 69 GAFHENVHFNFV 80
+ + V
Sbjct: 150 KEYFADFLSMNV 161
>3nwo_A PIP, proline iminopeptidase; structural genomics, seattle
structural genomics center for infectious disease,
ssgcid, mycobac smegmatis; 1.90A {Mycobacterium
smegmatis}
Length = 330
Score = 62.0 bits (151), Expect = 1e-11
Identities = 25/142 (17%), Positives = 43/142 (30%), Gaps = 20/142 (14%)
Query: 58 IKTRFLLSRTIGAFHENVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFS--HEYW 115
+ +R + G V P ++ LHG P + + + +
Sbjct: 28 VSSRTV---PFGDHETWVQVTTPENAQPHALPLIVLHGGPGMAHNYVANIAALADETGRT 84
Query: 116 TVAVD------------IKTNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVW 163
+ D +F T VD LG R ++G+ +GG L
Sbjct: 85 VIHYDQVGCGNSTHLPDAPADFWTPQL---FVDEFHAVCTALGIERYHVLGQSWGGMLGA 141
Query: 164 SFLDKYPELVVKSIIINAPHPA 185
+ P +V I N+P
Sbjct: 142 EIAVRQPSGLVSLAICNSPASM 163
Score = 28.9 bits (65), Expect = 1.2
Identities = 10/37 (27%), Positives = 17/37 (45%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPA 45
R ++G+ +GG L + P +V I N+P
Sbjct: 127 RYHVLGQSWGGMLGAEIAVRQPSGLVSLAICNSPASM 163
>1a8q_A Bromoperoxidase A1; haloperoxidase, oxidoreductase; 1.75A
{Streptomyces aureofaciens} SCOP: c.69.1.12
Length = 274
Score = 61.6 bits (150), Expect = 2e-11
Identities = 20/112 (17%), Positives = 43/112 (38%), Gaps = 11/112 (9%)
Query: 88 PLMLFLHGFPESWYIWKHQMTEF-SHEYWTVAVDI-------KTNFRTIADRYFLVDSLK 139
++F+HG+P + W+ Q+ Y +A D D + D L
Sbjct: 20 RPVVFIHGWPLNGDAWQDQLKAVVDAGYRGIAHDRRGHGHSTPVWDGYDFDTF--ADDLN 77
Query: 140 VFLDHLGRNRCILIGRDFGGSLVWSFLDKY-PELVVKSIIINAPHPAVFKQE 190
L L L+ GG + ++ ++ + +++++A P + K +
Sbjct: 78 DLLTDLDLRDVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSD 129
Score = 30.0 bits (68), Expect = 0.58
Identities = 6/43 (13%), Positives = 20/43 (46%), Gaps = 1/43 (2%)
Query: 9 RCILIGRDFGGSLVWSFLDKY-PELVVKSIIINAPHPAVFKQE 50
L+ GG + ++ ++ + +++++A P + K +
Sbjct: 87 DVTLVAHSMGGGELARYVGRHGTGRLRSAVLLSAIPPVMIKSD 129
>2yys_A Proline iminopeptidase-related protein; TTHA1809, structural
genomics, unknown function; 2.20A {Thermus thermophilus}
Length = 286
Score = 60.5 bits (147), Expect = 4e-11
Identities = 21/130 (16%), Positives = 41/130 (31%), Gaps = 15/130 (11%)
Query: 75 VHFNFVSAGSPKNPLMLFLHGFPES-WYIWKHQMTEFSHEYWTVAVD-----------IK 122
G + P + LHG P Y+ + + ++ + V D
Sbjct: 13 AELYVEDVGPVEGPALFVLHGGPGGNAYVLREGLQDYLEGFRVVYFDQRGSGRSLELPQD 72
Query: 123 TNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 182
T+ LV+ + + LG R L+ FG + L ++P+ ++
Sbjct: 73 PRLFTVDA---LVEDTLLLAEALGVERFGLLAHGFGAVVALEVLRRFPQAEGAILLAPWV 129
Query: 183 HPAVFKQELR 192
+ L
Sbjct: 130 NFPWLAARLA 139
Score = 28.9 bits (65), Expect = 1.3
Identities = 7/43 (16%), Positives = 15/43 (34%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQEL 51
R L+ FG + L ++P+ ++ + L
Sbjct: 96 RFGLLAHGFGAVVALEVLRRFPQAEGAILLAPWVNFPWLAARL 138
>2ocg_A Valacyclovir hydrolase; alpha beta hydrolase fold; 1.75A {Homo
sapiens} PDB: 2oci_A* 2ock_A 2ocl_A
Length = 254
Score = 57.7 bits (140), Expect = 2e-10
Identities = 21/117 (17%), Positives = 38/117 (32%), Gaps = 9/117 (7%)
Query: 74 NVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTV-AVDI-------KTNF 125
V ++ G + ++L + Q+ + + +TV A D +
Sbjct: 11 GVQLHYQQTGEGDHAVLLLPGMLGSGETDFGPQLKNLNKKLFTVVAWDPRGYGHSRPPDR 70
Query: 126 RTIADRY-FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINA 181
AD + + L + L+G GG KYP + K +I A
Sbjct: 71 DFPADFFERDAKDAVDLMKALKFKKVSLLGWSDGGITALIAAAKYPSYIHKMVIWGA 127
>3e0x_A Lipase-esterase related protein; APC60309, clostridium
acetobutylicum ATCC 824, structural genomics, PSI-2;
HET: MSE; 1.45A {Clostridium acetobutylicum}
Length = 245
Score = 57.7 bits (140), Expect = 2e-10
Identities = 23/116 (19%), Positives = 49/116 (42%), Gaps = 10/116 (8%)
Query: 74 NVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI----KTNFRTIA 129
+H+ V N L LF+HG + I+ ++ +Y + +D+ ++ + +
Sbjct: 4 MLHYVHVGNKKSPNTL-LFVHGSGCNLKIFGELE-KYLEDYNCILLDLKGHGESKGQCPS 61
Query: 130 DRYFLVDSLKVFLDHLG----RNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINA 181
Y +D++ F+ + + LIG GG++V K V K + ++
Sbjct: 62 TVYGYIDNVANFITNSEVTKHQKNITLIGYSMGGAIVLGVALKKLPNVRKVVSLSG 117
Score = 29.2 bits (66), Expect = 1.0
Identities = 15/74 (20%), Positives = 26/74 (35%), Gaps = 2/74 (2%)
Query: 8 NRCILIGRDFGGSLVWSFLDKYPELVVKSIIIN--APHPAVFKQELKKMSQLIKTRFLLS 65
LIG GG++V K V K + ++ A + K ++K+ L
Sbjct: 84 KNITLIGYSMGGAIVLGVALKKLPNVRKVVSLSGGARFDKLDKDFMEKIYHNQLDNNYLL 143
Query: 66 RTIGAFHENVHFNF 79
IG + +
Sbjct: 144 ECIGGIDNPLSEKY 157
>1q0r_A RDMC, aclacinomycin methylesterase; anthracycline, hydrolase,
polyketide, tailoring enzyme, structural proteomics in
europe, spine; HET: AKT 1PE; 1.45A {Streptomyces
purpurascens} SCOP: c.69.1.28 PDB: 1q0z_A*
Length = 298
Score = 56.8 bits (137), Expect = 8e-10
Identities = 25/153 (16%), Positives = 46/153 (30%), Gaps = 11/153 (7%)
Query: 74 NVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEF--SHEYWTVAVDIK-----TNFR 126
+V G P +P +L + G S W + + D + T
Sbjct: 10 DVELWSDDFGDPADPALLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRD 69
Query: 127 TIADRYF---LVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPH 183
A Y L LD G +R ++G G ++ + + + S+ +
Sbjct: 70 FAAHPYGFGELAADAVAVLDGWGVDRAHVVGLSMGATITQVIALDHHDR-LSSLTMLLGG 128
Query: 184 PAVFKQELRGLIVPKSKKEGRHDIGESQPFRER 216
+ V + + G QPF +
Sbjct: 129 GLDIDFDANIERVMRGEPTLDGLPGPQQPFLDA 161
>1wom_A RSBQ, sigma factor SIGB regulation protein RSBQ; alpha/beta
hydrolase, signaling protein; 2.50A {Bacillus subtilis}
PDB: 1wpr_A*
Length = 271
Score = 56.5 bits (137), Expect = 8e-10
Identities = 13/107 (12%), Positives = 31/107 (28%), Gaps = 15/107 (14%)
Query: 87 NPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVD------------IKTNFRTIADRYFL 134
++F GF +W F ++ + D ++T+
Sbjct: 20 KASIMFAPGFGCDQSVWNAVAPAFEEDHRVILFDYVGSGHSDLRAYDLNRYQTLDG---Y 76
Query: 135 VDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINA 181
+ + L + +G G + + PEL +++
Sbjct: 77 AQDVLDVCEALDLKETVFVGHSVGALIGMLASIRRPELFSHLVMVGP 123
>3c5v_A PME-1, protein phosphatase methylesterase 1; demethylase, PP2A,
alternative splicing, hydrolase, phosphoprotein, serine
esterase; 2.00A {Homo sapiens} PDB: 3c5w_P
Length = 316
Score = 56.8 bits (137), Expect = 9e-10
Identities = 23/142 (16%), Positives = 47/142 (33%), Gaps = 14/142 (9%)
Query: 59 KTRFLLSRTIGAFHENVHFNF-VSAGSPKNPLMLFLHGFPESWYIWKHQMTEFS--HEYW 115
F + +E F V + P++L LHG S W +
Sbjct: 9 SQYFESMEDVEVENETGKDTFRVYKSGSEGPVLLLLHGGGHSALSWAVFTAAIISRVQCR 68
Query: 116 TVAVDI----KTNFRTIAD--RYFLVDSLKVFLDHLGRN---RCILIGRDFGGSLVWSF- 165
VA+D+ +T + D + + ++ + + +LIG GG++
Sbjct: 69 IVALDLRSHGETKVKNPEDLSAETMAKDVGNVVEAMYGDLPPPIMLIGHSMGGAIAVHTA 128
Query: 166 LDKYPELVVKSIIIN-APHPAV 186
++ +I+ A+
Sbjct: 129 SSNLVPSLLGLCMIDVVEGTAM 150
Score = 29.8 bits (67), Expect = 0.70
Identities = 7/40 (17%), Positives = 15/40 (37%), Gaps = 2/40 (5%)
Query: 9 RCILIGRDFGGSLVWSF-LDKYPELVVKSIIIN-APHPAV 46
+LIG GG++ ++ +I+ A+
Sbjct: 111 PIMLIGHSMGGAIAVHTASSNLVPSLLGLCMIDVVEGTAM 150
>3ia2_A Arylesterase; alpha-beta hydrolase fold, transition state analog,
hydrolas oxidoreductase, peroxidase; 1.65A {Pseudomonas
fluorescens} PDB: 1va4_A 3hi4_A 3hea_A
Length = 271
Score = 56.1 bits (136), Expect = 1e-09
Identities = 24/114 (21%), Positives = 42/114 (36%), Gaps = 21/114 (18%)
Query: 91 LFLHGFPESWYIWKHQMTEFS-HEYWTVAVDIKTNFR------------TIADRYFLVDS 137
LF HG+ +W++QM S Y T+A D R D
Sbjct: 23 LFSHGWLLDADMWEYQMEYLSSRGYRTIAFD----RRGFGRSDQPWTGNDYDT---FADD 75
Query: 138 LKVFLDHLGRNRCILIGRDFGGSLVWSFLDKY-PELVVKSIIINAPHPAVFKQE 190
+ ++HL L+G GG V ++ ++ V +++ A P ++
Sbjct: 76 IAQLIEHLDLKEVTLVGFSMGGGDVARYIARHGSARVAGLVLLGAVTPLFGQKP 129
>2puj_A 2-hydroxy-6-OXO-6-phenylhexa-2,4-dienoate hydrola; C-C bond
hydrolase, hydrolase; HET: HPZ; 1.57A {Burkholderia
xenovorans} PDB: 2pu7_A* 3v1m_A* 3v1l_A* 2puh_A* 3v1n_A*
3v1k_A* 2og1_A 2pu5_A 2rhw_A* 2rht_A* 2ri6_A
Length = 286
Score = 55.8 bits (135), Expect = 1e-09
Identities = 24/120 (20%), Positives = 49/120 (40%), Gaps = 14/120 (11%)
Query: 73 ENVHFNFVSAGSPKNPLMLFLHGFP---ESWYIWKHQMTEF-SHEYWTVAVDI----KTN 124
+ + ++ AG+ ++ LHG W + + F Y + D K++
Sbjct: 21 SDFNIHYNEAGNG--ETVIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKDSPGFNKSD 78
Query: 125 FRTIADRY---FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINA 181
+ D ++K +D L +R L+G GG+ +F +YP+ + K I++
Sbjct: 79 -AVVMDEQRGLVNARAVKGLMDALDIDRAHLVGNAMGGATALNFALEYPDRIGKLILMGP 137
Score = 28.8 bits (65), Expect = 1.4
Identities = 10/33 (30%), Positives = 18/33 (54%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINA 41
R L+G GG+ +F +YP+ + K I++
Sbjct: 105 RAHLVGNAMGGATALNFALEYPDRIGKLILMGP 137
>3om8_A Probable hydrolase; structural genomics, PSI-2, protein structure
initiative, MI center for structural genomics, MCSG;
HET: MES; 2.25A {Pseudomonas aeruginosa}
Length = 266
Score = 53.8 bits (130), Expect = 6e-09
Identities = 19/121 (15%), Positives = 41/121 (33%), Gaps = 19/121 (15%)
Query: 75 VHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFR-------- 126
+ G+ + PL+ + + ++W Q+ + + + D R
Sbjct: 15 ASLAYRLDGAAEKPLLALSNSIGTTLHMWDAQLPALTRHFRVLRYD----ARGHGASSVP 70
Query: 127 ----TIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 182
T+A L + + LD L R +G GG + P+ + + ++ N
Sbjct: 71 PGPYTLAR---LGEDVLELLDALEVRRAHFLGLSLGGIVGQWLALHAPQRIERLVLANTS 127
Query: 183 H 183
Sbjct: 128 A 128
>2qmq_A Protein NDRG2, protein NDR2; alpha/beta-hydrolases fold, NDR
family, developmental protei differentiation,
neurogenesis, phosphorylation; HET: 2PE; 1.70A {Mus
musculus} PDB: 2xmq_A 2xmr_A 2xms_A
Length = 286
Score = 53.2 bits (127), Expect = 1e-08
Identities = 24/139 (17%), Positives = 47/139 (33%), Gaps = 21/139 (15%)
Query: 65 SRTIGAFHENVHFNFVSAGSPKNPLMLFLHGFP---ESWY---IWKHQMTEFSHEYWTVA 118
+ ++ + +V F PK P + H +S + M E + V
Sbjct: 13 THSVETPYGSVTFTVYGTPKPKRPAIFTYHDVGLNYKSCFQPLFRFGDMQEIIQNFVRVH 72
Query: 119 VDI------------KTNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFL 166
VD + ++ L D + L +L + I +G G ++ +
Sbjct: 73 VDAPGMEEGAPVFPLGYQYPSLDQ---LADMIPCILQYLNFSTIIGVGVGAGAYILSRYA 129
Query: 167 DKYPELVVKSIIINAPHPA 185
+P+ V ++IN A
Sbjct: 130 LNHPDTVEGLVLINIDPNA 148
Score = 27.8 bits (61), Expect = 3.3
Identities = 8/37 (21%), Positives = 16/37 (43%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPA 45
I +G G ++ + +P+ V ++IN A
Sbjct: 112 TIIGVGVGAGAYILSRYALNHPDTVEGLVLINIDPNA 148
>3qvm_A OLEI00960; structural genomics, PSI-biology, midwest center for
structu genomics, MCSG, alpha-beta hydrolase fold,
hydrolase; 2.00A {Oleispira antarctica}
Length = 282
Score = 52.6 bits (127), Expect = 2e-08
Identities = 12/106 (11%), Positives = 29/106 (27%), Gaps = 15/106 (14%)
Query: 88 PLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVD------------IKTNFRTIADRYFLV 135
+L HGF +W+ + E ++ + D + ++
Sbjct: 29 KTVLLAHGFGCDQNMWRFMLPELEKQFTVIVFDYVGSGQSDLESFSTKRYSSLEG---YA 85
Query: 136 DSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINA 181
++ L L +IG + + + +I
Sbjct: 86 KDVEEILVALDLVNVSIIGHSVSSIIAGIASTHVGDRISDITMICP 131
>3bf7_A Esterase YBFF; thioesterase, helical CAP, hydrolase; 1.10A
{Escherichia coli} PDB: 3bf8_A
Length = 255
Score = 52.0 bits (125), Expect = 2e-08
Identities = 21/118 (17%), Positives = 41/118 (34%), Gaps = 12/118 (10%)
Query: 76 HFNFVSAGSPKN-PLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI-------KTNFRT 127
+ +A + N ++ +HG S + +++ + VD+ +
Sbjct: 4 NIRAQTAQNQHNNSPIVLVHGLFGSLDNLGVLARDLVNDHNIIQVDVRNHGLSPREPVMN 63
Query: 128 IADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIII-NAPHP 184
+ L LD L ++ IG GG V + P+ + K + I AP
Sbjct: 64 YPA---MAQDLVDTLDALQIDKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVD 118
Score = 29.3 bits (66), Expect = 0.89
Identities = 11/61 (18%), Positives = 24/61 (39%), Gaps = 1/61 (1%)
Query: 8 NRCILIGRDFGGSLVWSFLDKYPELVVKSIII-NAPHPAVFKQELKKMSQLIKTRFLLSR 66
++ IG GG V + P+ + K + I AP ++ + + + ++
Sbjct: 81 DKATFIGHSMGGKAVMALTALAPDRIDKLVAIDIAPVDYHVRRHDEIFAAINAVSESDAQ 140
Query: 67 T 67
T
Sbjct: 141 T 141
>3bwx_A Alpha/beta hydrolase; YP_496220.1, joint center for structural
genomics, protein structure initiative, PSI-2; HET: MSE;
1.50A {Novosphingobium aromaticivorans}
Length = 285
Score = 52.0 bits (125), Expect = 3e-08
Identities = 21/118 (17%), Positives = 42/118 (35%), Gaps = 8/118 (6%)
Query: 82 AGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI----KTNFRTIADRY---FL 134
G P +L L G + ++ T + ++ + ++ +++ Y
Sbjct: 24 EGDISRPPVLCLPGLTRNARDFEDLATRLAGDWRVLCPEMRGRGDSDYAKDPMTYQPMQY 83
Query: 135 VDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQELR 192
+ L+ L G R + IG GG L P + + ++N P V + L
Sbjct: 84 LQDLEALLAQEGIERFVAIGTSLGGLLTMLLAAANPAR-IAAAVLNDVGPEVSPEGLE 140
>1m33_A BIOH protein; alpha-betta-alpha sandwich, structural genomics, PSI,
protei structure initiative; HET: MSE 3OH; 1.70A
{Escherichia coli} SCOP: c.69.1.26
Length = 258
Score = 51.5 bits (124), Expect = 3e-08
Identities = 23/138 (16%), Positives = 47/138 (34%), Gaps = 25/138 (18%)
Query: 73 ENVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI-------KTNF 125
N+ + + G L + LHG+ + +W+ E S + VD+
Sbjct: 2 NNIWWQ--TKGQGNVHL-VLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGA 58
Query: 126 RTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINA---- 181
++AD + + + ++ I +G GG + +PE V + + +
Sbjct: 59 LSLAD---MAE----AVLQQAPDKAIWLGWSLGGLVASQIALTHPERVRALVTVASSPCF 111
Query: 182 ----PHPAVFKQELRGLI 195
P + L G
Sbjct: 112 SARDEWPGIKPDVLAGFQ 129
>3r0v_A Alpha/beta hydrolase fold protein; structural genomics,
PSI-biology, protein structure initiati alpha/beta
hydrolase; HET: MSE; 1.38A {Sphaerobacter thermophilus}
Length = 262
Score = 50.0 bits (120), Expect = 1e-07
Identities = 11/105 (10%), Positives = 27/105 (25%), Gaps = 12/105 (11%)
Query: 88 PLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI-------KTNFRTIADRYFLVDSLKV 140
P ++ + G + + + + D T + ++ L
Sbjct: 24 PPVVLVGGALSTRAGGAPLAERLAPHFTVICYDRRGRGDSGDTPPYAVER---EIEDLAA 80
Query: 141 FLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPA 185
+D G + G G L + + + P+
Sbjct: 81 IIDAAGG-AAFVFGMSSGAGLSLLAAASGLP-ITRLAVFEPPYAV 123
>3v48_A Aminohydrolase, putative aminoacrylate hydrolase RUTD; structural
genomics, PSI-biology, NEW YORK structural genomi
research consortium; 2.10A {Escherichia coli SE11}
Length = 268
Score = 49.2 bits (118), Expect = 3e-07
Identities = 23/123 (18%), Positives = 36/123 (29%), Gaps = 22/123 (17%)
Query: 72 HENVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFR----- 126
H + + P+++ + G S W Q+ EY V D R
Sbjct: 2 HMKLSLSPPPYAD--APVVVLISGLGGSGSYWLPQLAVLEQEYQVVCYD----QRGTGNN 55
Query: 127 --------TIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSII 178
+IA + L L G ++G G + YP V I
Sbjct: 56 PDTLAEDYSIAQ---MAAELHQALVAAGIEHYAVVGHALGALVGMQLALDYPASVTVLIS 112
Query: 179 INA 181
+N
Sbjct: 113 VNG 115
>2xua_A PCAD, 3-oxoadipate ENOL-lactonase; hydrolase, catechol metabolism;
1.90A {Burkholderia xenovorans}
Length = 266
Score = 48.8 bits (117), Expect = 3e-07
Identities = 17/122 (13%), Positives = 35/122 (28%), Gaps = 19/122 (15%)
Query: 74 NVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFR------- 126
+H+ P ++ + +W Q+ S + + D R
Sbjct: 13 ELHYRIDGERHGNAPWIVLSNSLGTDLSMWAPQVAALSKHFRVLRYD----TRGHGHSEA 68
Query: 127 -----TIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINA 181
TI L + +D L R G GG + ++ + + + + N
Sbjct: 69 PKGPYTIEQ---LTGDVLGLMDTLKIARANFCGLSMGGLTGVALAARHADRIERVALCNT 125
Query: 182 PH 183
Sbjct: 126 AA 127
>1ys1_X Lipase; CIS peptide Leu 234, Ca2+ ION, inhibitor hexylphosphonic
acid (R) 2-methyl-3-phenylpropyl ester, hydrolase; HET:
2HR; 1.10A {Burkholderia cepacia} PDB: 1ys2_X* 4lip_D
1hqd_A 2lip_A 1oil_A* 3lip_A 2nw6_A 5lip_A* 1cvl_A
2es4_A 1tah_B 1qge_D 1qge_E
Length = 320
Score = 48.9 bits (116), Expect = 3e-07
Identities = 21/110 (19%), Positives = 36/110 (32%), Gaps = 11/110 (10%)
Query: 85 PKNPLMLFLHGF---------PESWYIWKHQMTEFSHEYWTVAVDIKTNFRTIADR-YFL 134
+ P+ + +HG E WY + + + + + + R L
Sbjct: 7 TRYPI-ILVHGLTGTDKYAGVLEYWYGIQEDLQQRGATVYVANLSGFQSDDGPNGRGEQL 65
Query: 135 VDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHP 184
+ +K L G + L+G GG P+LV I PH
Sbjct: 66 LAYVKTVLAATGATKVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPHR 115
Score = 30.8 bits (69), Expect = 0.37
Identities = 10/36 (27%), Positives = 13/36 (36%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHP 44
+ L+G GG P+LV I PH
Sbjct: 80 KVNLVGHSQGGLTSRYVAAVAPDLVASVTTIGTPHR 115
>1r3d_A Conserved hypothetical protein VC1974; structural genomics,
hydrolase, NYSGXRC, NEW YORK SGX research center for
structural genomics, PSI; 1.90A {Vibrio cholerae} SCOP:
c.69.1.35
Length = 264
Score = 47.3 bits (113), Expect = 1e-06
Identities = 20/123 (16%), Positives = 46/123 (37%), Gaps = 9/123 (7%)
Query: 79 FVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHE-YWTVAVDI----KTNFRTIADRYF 133
+ + + PL++ +HG S W+ ++ + + +D+ R +
Sbjct: 8 HFAKPTARTPLVVLVHGLLGSGADWQPVLSHLARTQCAALTLDLPGHGTNPERHCDNFAE 67
Query: 134 LVDSLKVFLDHLG--RNRCILIGRDFGGSLVWSFLDKYPELV--VKSIIINAPHPAVFKQ 189
V+ ++ + IL+G GG L+ L + ++ II H + +
Sbjct: 68 AVEMIEQTVQAHVTSEVPVILVGYSLGGRLIMHGLAQGAFSRLNLRGAIIEGGHFGLQEN 127
Query: 190 ELR 192
E +
Sbjct: 128 EEK 130
>3hss_A Putative bromoperoxidase; alpha beta hydrolase, oxidoreductase,
hydrolase; 1.90A {Mycobacterium tuberculosis} PDB:
3e3a_A 3hys_A 3hzo_A
Length = 293
Score = 47.4 bits (113), Expect = 1e-06
Identities = 15/123 (12%), Positives = 36/123 (29%), Gaps = 14/123 (11%)
Query: 72 HENVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTE--FSHEYWTVAVDI-------K 122
++ + G+ ++F+ G + W + Y + D
Sbjct: 30 FRVINLAYDDNGTG--DPVVFIAGRGGAGRTWHPHQVPAFLAAGYRCITFDNRGIGATEN 87
Query: 123 TNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 182
T +V ++ L ++G G + + PELV ++++
Sbjct: 88 AEGFTTQT---MVADTAALIETLDIAPARVVGVSMGAFIAQELMVVAPELVSSAVLMATR 144
Query: 183 HPA 185
Sbjct: 145 GRL 147
>1isp_A Lipase; alpha/beta hydrolase fold, hydrolase; 1.30A {Bacillus
subtilis} SCOP: c.69.1.18 PDB: 1i6w_A 1r4z_A* 1r50_A*
2qxu_A 2qxt_A 1t4m_A 1t2n_A 3d2a_A 3qzu_A 3d2b_A 3d2c_A
3qmm_A
Length = 181
Score = 38.9 bits (91), Expect = 4e-04
Identities = 17/118 (14%), Positives = 39/118 (33%), Gaps = 14/118 (11%)
Query: 86 KNPLMLFLHGFPESWYIWKHQMTEFSHEYWTV----AVDIKTNFRTIADRYFLVDSLKVF 141
NP+ + +HG + + + + + W+ AVD T + L F
Sbjct: 3 HNPV-VMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNN---GPVLSRF 58
Query: 142 LDHL----GRNRCILIGRDFGGSLVWSFLDKY--PELVVKSIIINAPHPAVFKQELRG 193
+ + G + ++ GG+ ++ V + + + + L G
Sbjct: 59 VQKVLDETGAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGKALPG 116
>3vis_A Esterase; alpha/beta-hydrolase fold, polyethylene terephthal
hydrolase; HET: PE4; 1.76A {Thermobifida alba}
Length = 306
Score = 38.2 bits (88), Expect = 0.001
Identities = 21/126 (16%), Positives = 40/126 (31%), Gaps = 14/126 (11%)
Query: 82 AGSPKNPLMLFLHGFPESWYIWKHQMTEF-SHEYWTVAVDIKTNFRTIADR--------- 131
+ + G+ + SH + +A+D T R
Sbjct: 91 RENNTYGAIAISPGYTGTQSSIAWLGERIASHGFVVIAIDTNTTLDQPDSRARQLNAALD 150
Query: 132 YFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQEL 191
Y L D+ + + +R ++G GG + P+ +K+ I P +
Sbjct: 151 YMLTDASSAVRNRIDASRLAVMGHSMGGGGTLRLASQRPD--LKAAI--PLTPWHLNKSW 206
Query: 192 RGLIVP 197
R + VP
Sbjct: 207 RDITVP 212
>3doh_A Esterase; alpha-beta hydrolase, beta sheet; 2.60A {Thermotoga
maritima} PDB: 3doi_A
Length = 380
Score = 38.5 bits (89), Expect = 0.001
Identities = 23/115 (20%), Positives = 39/115 (33%), Gaps = 28/115 (24%)
Query: 86 KNPLMLFLHGFPES------WYIWKHQMTEFS-------HEYWTVA-------------V 119
K PL++FLHG E ++ H + +A
Sbjct: 173 KYPLVVFLHGAGERGTDNYLQVAGNRGAVVWAQPRYQVVHPCFVLAPQCPPNSSWSTLFT 232
Query: 120 DIKTNFRTIADRYFLVDSLKVFLDHLG--RNRCILIGRDFGGSLVWSFLDKYPEL 172
D + F ++ ++ LD NR + G GG W+ + ++PEL
Sbjct: 233 DRENPFNPEKPLLAVIKIIRKLLDEYNIDENRIYITGLSMGGYGTWTAIMEFPEL 287
>3p2m_A Possible hydrolase; alpha/beta hydrolase superfamily; 2.80A
{Mycobacterium tuberculosis}
Length = 330
Score = 37.8 bits (88), Expect = 0.002
Identities = 19/104 (18%), Positives = 36/104 (34%), Gaps = 11/104 (10%)
Query: 83 GSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTN----FRTIADRY---FLV 135
G + +FLHG ++ + W + +AVD+ Y
Sbjct: 78 GGSAPRV-IFLHGGGQNAHTWDTVIVGLGEP--ALAVDL-PGHGHSAWREDGNYSPQLNS 133
Query: 136 DSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIII 179
++L L L ++G GG P+LV + +++
Sbjct: 134 ETLAPVLRELAPGAEFVVGMSLGGLTAIRLAAMAPDLVGELVLV 177
>2wfl_A Polyneuridine-aldehyde esterase; alkaloid metabolism, monoterpenoid
indole alkaloids, PNAE, hydrolase, serine esterase; HET:
CME; 2.10A {Rauvolfia serpentina} PDB: 2wfm_A 3gzj_A*
Length = 264
Score = 37.2 bits (86), Expect = 0.002
Identities = 23/118 (19%), Positives = 45/118 (38%), Gaps = 18/118 (15%)
Query: 81 SAGSPKNPLMLFLHGF---PESWYIWKHQMTEFSHEYWTVAVDI---------KTNFRTI 128
+A + + + +HG WY K + H+ AVD+ T
Sbjct: 4 AANAKQQKHFVLVHGGCLGAWIWYKLKPLLESAGHK--VTAVDLSAAGINPRRLDEIHTF 61
Query: 129 ADRYFLVDSLKVFLDHLGRNR-CILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPA 185
D + L + + + +L+G FGG + ++ YPE + ++ ++A P
Sbjct: 62 RD---YSEPLMEVMASIPPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPD 116
Score = 27.6 bits (61), Expect = 3.5
Identities = 11/41 (26%), Positives = 22/41 (53%)
Query: 5 PCRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPA 45
P + +L+G FGG + ++ YPE + ++ ++A P
Sbjct: 76 PPDEKVVLLGHSFGGMSLGLAMETYPEKISVAVFMSAMMPD 116
>2y6u_A Peroxisomal membrane protein LPX1; hydrolase, putative esterase,
putative lipase; HET: CME CSO; 1.90A {Saccharomyces
cerevisiae} PDB: 2y6v_A*
Length = 398
Score = 37.0 bits (85), Expect = 0.003
Identities = 21/167 (12%), Positives = 44/167 (26%), Gaps = 25/167 (14%)
Query: 78 NFVSAGSPKNPLMLFLH--GFP-ESW-YIWKHQMTEFSHEYWTV----AVDI-------K 122
+ + ++FLH G W Y + + + + +D
Sbjct: 43 RQRRSRTATRLNLVFLHGSGMSKVVWEYYLPRLVAADAEGNYAIDKVLLIDQVNHGDSAV 102
Query: 123 TNFRTIADRYFLVDS---LKVFLDHLGRN------RCILIGRDFGGSLVWSFLDKYPELV 173
N + + +D + + ++IG GG + P L
Sbjct: 103 RNRGRLGTNFNWIDGARDVLKIATCELGSIDSHPALNVVIGHSMGGFQALACDVLQPNLF 162
Query: 174 VKSIIINAP-HPAVFKQELRGLIVPKSKKEGRHDIGESQPFRERTFS 219
I+I R + P S + + + F+
Sbjct: 163 HLLILIEPVVITRKAIGAGRPGLPPDSPQIPENLYNSLRLKTCDHFA 209
Score = 28.2 bits (62), Expect = 2.5
Identities = 8/34 (23%), Positives = 12/34 (35%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 42
++IG GG + P L I+I
Sbjct: 138 LNVVIGHSMGGFQALACDVLQPNLFHLLILIEPV 171
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 37.5 bits (86), Expect = 0.003
Identities = 36/237 (15%), Positives = 64/237 (27%), Gaps = 72/237 (30%)
Query: 1 MLVNPCRNRCILIGRDFGGSLVWS------FLDKYPELVV---KSII--INAPHPAVFKQ 49
+L + C+L+ + V + F L+ K + ++A
Sbjct: 237 LLKSKPYENCLLVLLN-----VQNAKAWNAFNLSCKILLTTRFKQVTDFLSAATTTHISL 291
Query: 50 ELKKMSQLIKTRFLLSRTIGAFHENVHFNFVSAGS-PK-----NPLML-----FLHGFPE 98
+ M+ + + P+ NP L +
Sbjct: 292 DHHSMT------LTPDEVKSLLLKYLD---CRPQDLPREVLTTNPRRLSIIAESIRDGLA 342
Query: 99 SWYIWKHQMTEFSHEYWTVAVDIKTNFRTIAD----RYFLVDSLKVFLDHLGRNRCILIG 154
+W WKH + I+++ + + F D L VF +L
Sbjct: 343 TWDNWKHV------NCDKLTTIIESSLNVLEPAEYRKMF--DRLSVFPPSAHIPTILL-- 392
Query: 155 RDFGGSLVWSFLDKY-PELVVKSIIINAPHPAVFKQELRGLIVPKSKKEGR---HDI 207
SL+W + K +VV K L+ K KE I
Sbjct: 393 -----SLIWFDVIKSDVMVVVN------------KLHKYSLVE-KQPKESTISIPSI 431
Score = 32.1 bits (72), Expect = 0.14
Identities = 23/136 (16%), Positives = 46/136 (33%), Gaps = 21/136 (15%)
Query: 106 QMTEFSHEYWTVAVDIKTNFRTIADRYFLVDSLK-VF----LDHLGRNRCILIGRDFGGS 160
+ E ++Y + + F D + D K + +DH+ ++ + G
Sbjct: 10 ETGEHQYQYKDILSVFEDAFVDNFDCKDVQDMPKSILSKEEIDHIIMSKDAVSGTLR--- 66
Query: 161 LVWSFLDKYPELVVKSIIINAPHP------AVFKQELRGLIVPKSKKEGRHD--IGESQP 212
L W+ L K E +V+ + + K E R + + D ++Q
Sbjct: 67 LFWTLLSK-QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQV 125
Query: 213 FRERTFS----IQAIR 224
F + S +R
Sbjct: 126 FAKYNVSRLQPYLKLR 141
Score = 31.0 bits (69), Expect = 0.38
Identities = 35/218 (16%), Positives = 68/218 (31%), Gaps = 70/218 (32%)
Query: 20 SLVWSFLDKY-PELVVKSIIINAPHPAVFKQELKKMSQLIKTRFLLSRTI---------- 68
SL+W + K +VV +L K S + K + +I
Sbjct: 393 SLIWFDVIKSDVMVVV--------------NKLHKYSLVEKQPKESTISIPSIYLELKVK 438
Query: 69 ----GAFHENV--HFNFVSAGSPKNPLMLFLHG--FPESWYIWKHQMTEFSHEYWTVAVD 120
A H ++ H+N + + +L + +I H E T+
Sbjct: 439 LENEYALHRSIVDHYNIPKTFDSDDLIPPYLDQYFY---SHIGHHLKNIEHPERMTLFRM 495
Query: 121 IKTNFRTI--------------ADRYFLVDSLKVFLDHLGRN-----RCILIGRDFGGSL 161
+ +FR + + LK + ++ N R + +
Sbjct: 496 VFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLV--------NA 547
Query: 162 VWSFLDKYPELVVKS-------IIINAPHPAVFKQELR 192
+ FL K E ++ S I + A A+F++ +
Sbjct: 548 ILDFLPKIEENLICSKYTDLLRIALMAEDEAIFEEAHK 585
Score = 29.1 bits (64), Expect = 1.5
Identities = 29/197 (14%), Positives = 61/197 (30%), Gaps = 61/197 (30%)
Query: 21 LVWSFLDKYPELVVKSIIINAPHP------AVFKQELKKMSQLIKTRFLLSRTIGAFHEN 74
L W+ L K E +V+ + + K E ++ S ++ ++ R +++N
Sbjct: 67 LFWTLLSK-QEEMVQKFVEEVLRINYKFLMSPIKTEQRQPS-MMTRMYIEQRDR-LYNDN 123
Query: 75 VHFN--FVSAGSP----KNPLM-------LFLHG---FPESWYI------WKHQMTEFSH 112
F VS P + L+ + + G ++W +K Q
Sbjct: 124 QVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFK 183
Query: 113 EYW-TVA----------------VDIKTNFRTIADRYF--------LVDSLKVFLDHLGR 147
+W + I N+ + +D + L+ L
Sbjct: 184 IFWLNLKNCNSPETVLEMLQKLLYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPY 243
Query: 148 NRCILIGRDFGGSLVWS 164
C+L+ + V +
Sbjct: 244 ENCLLVLLN-----VQN 255
>1mtz_A Proline iminopeptidase; alpha-beta hydrolase, CAP domain, caged
active site, prolyl peptidase; 1.80A {Thermoplasma
acidophilum} SCOP: c.69.1.7 PDB: 1mt3_A 1mu0_A* 1xrr_A
1xrq_A 1xro_A 1xrn_A 1xrm_A 1xrp_A 1xrl_A* 1xqw_A*
1xqx_A* 1xqy_A 1xqv_A
Length = 293
Score = 36.4 bits (85), Expect = 0.005
Identities = 25/154 (16%), Positives = 53/154 (34%), Gaps = 26/154 (16%)
Query: 54 MSQLIKTRFLLSRTIGAFHENVHFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHE 113
M Q + + + +++ A K L + +HG P + + + + + E
Sbjct: 1 MDQECIENYA---KVNGIY--IYYKLCKAPEEKAKL-MTMHGGPGMSHDYLLSLRDMTKE 54
Query: 114 YWTV------------AVDIKTNFRTIADRYFLVDSLKVFLDHL-GRNRCILIGRDFGGS 160
TV D TI V+ + L G + L+G +GG+
Sbjct: 55 GITVLFYDQFGCGRSEEPDQSKF--TIDY---GVEEAEALRSKLFGNEKVFLMGSSYGGA 109
Query: 161 LVWSFLDKYPELVVKSIIINAPHPAVFKQELRGL 194
L ++ KY + + I+ + ++ +
Sbjct: 110 LALAYAVKYQDHLKGLIVSGG--LSSVPLTVKEM 141
>3pfb_A Cinnamoyl esterase; alpha/beta hydrolase fold, hydrolase,
cinnamoyl/Fe esterase, hydroxycinammates, extracellular;
HET: ZYC; 1.58A {Lactobacillus johnsonii} PDB: 3pf9_A*
3pfc_A* 3s2z_A* 3pf8_A 3qm1_A*
Length = 270
Score = 35.6 bits (82), Expect = 0.007
Identities = 23/160 (14%), Positives = 52/160 (32%), Gaps = 27/160 (16%)
Query: 83 GSPKNPLMLFLHGFPES--WYIWKHQMTEFSHEYWTVAVDIKTNFR------------TI 128
+ + HGF + + + E ++ +F T+
Sbjct: 42 FGEIYDMAIIFHGFTANRNTSLLREIANSLRDENIAS---VRFDFNGHGDSDGKFENMTV 98
Query: 129 ADRYFLVDSLKVFLDHL----GRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHP 184
+ ++ L+++ L+G GG + YP+ ++K +++ AP
Sbjct: 99 LNE---IEDANAILNYVKTDPHVRNIYLVGHAQGGVVASMLAGLYPD-LIKKVVLLAPAA 154
Query: 185 AVFKQELRGLIVPKSKKEGRHDIGESQPFRERTFSIQAIR 224
+ L G + I + PF++ T +R
Sbjct: 155 TLKGDALEGNTQGVTYNPD--HIPDRLPFKDLTLGGFYLR 192
Score = 26.3 bits (58), Expect = 9.0
Identities = 12/53 (22%), Positives = 24/53 (45%), Gaps = 1/53 (1%)
Query: 4 NPCRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQELKKMSQ 56
+P L+G GG + YP+ ++K +++ AP + L+ +Q
Sbjct: 115 DPHVRNIYLVGHAQGGVVASMLAGLYPD-LIKKVVLLAPAATLKGDALEGNTQ 166
>3ksr_A Putative serine hydrolase; catalytic triad, structural genomics,
JOIN for structural genomics, JCSG; 2.69A {Xanthomonas
campestris PV}
Length = 290
Score = 34.4 bits (79), Expect = 0.018
Identities = 29/164 (17%), Positives = 52/164 (31%), Gaps = 35/164 (21%)
Query: 85 PKNPLMLFLHGFPESWYIWKHQMTEFSHE-----YWTVAVDIKTNFR---------TIAD 130
P +LF+HG+ S +H + E + D R
Sbjct: 26 TGMPGVLFVHGWGGS----QHHSLVRAREAVGLGCICMTFD----LRGHEGYASMRQSVT 77
Query: 131 RYFLVDSLKVFLDHLGR------NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHP 184
R +D +K D L + ++G +GG L + P V+ + + + P
Sbjct: 78 RAQNLDDIKAAYDQLASLPYVDAHSIAVVGLSYGGYLSALLTRERP---VEWLALRS--P 132
Query: 185 AVFKQELRGLIVPKSKKEGRHDIGESQPFRERTFSIQAIRFLTQ 228
A++K PK D+ + + A+ Q
Sbjct: 133 ALYKDAHWD--QPKVSLNADPDLMDYRRRALAPGDNLALAACAQ 174
>2rau_A Putative esterase; NP_343859.1, putative lipase, structural
genomics, joint CEN structural genomics, JCSG; HET: PG4
UNL; 1.85A {Sulfolobus solfataricus P2}
Length = 354
Score = 34.6 bits (78), Expect = 0.022
Identities = 17/123 (13%), Positives = 45/123 (36%), Gaps = 18/123 (14%)
Query: 81 SAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHE--YWTVAVDIKTNFRT----------I 128
+ S + + + +G + ++ + + + +D +T++
Sbjct: 59 TWSSGEQLVTISWNGVHYTIPDYRKSIVLYLARNGFNVYTIDYRTHYVPPFLKDRQLSFT 118
Query: 129 ADRYF--LVDSLKVFLDHL----GRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP 182
A+ + + +K + + G+ R L G FGG ++ Y + +K +I+
Sbjct: 119 ANWGWSTWISDIKEVVSFIKRDSGQERIYLAGESFGGIAALNYSSLYWKNDIKGLILLDG 178
Query: 183 HPA 185
P
Sbjct: 179 GPT 181
Score = 26.9 bits (58), Expect = 6.1
Identities = 19/90 (21%), Positives = 30/90 (33%), Gaps = 7/90 (7%)
Query: 9 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQELKKMSQLIKTRFLLSRTI 68
R L G FGG ++ Y + +K +I+ P K K +I
Sbjct: 145 RIYLAGESFGGIAALNYSSLYWKNDIKGLILLDGGPT-------KHGIRPKFYTPEVNSI 197
Query: 69 GAFHENVHFNFVSAGSPKNPLMLFLHGFPE 98
+ S G P NP+ + P+
Sbjct: 198 EEMEAKGIYVIPSRGGPNNPIWSYALANPD 227
>3dqz_A Alpha-hydroxynitrIle lyase-like protein; A/B-hydrloase fold,
cyanogenesis; 2.50A {Arabidopsis thaliana}
Length = 258
Score = 33.4 bits (76), Expect = 0.036
Identities = 22/111 (19%), Positives = 39/111 (35%), Gaps = 12/111 (10%)
Query: 85 PKNPLMLFLHGF---PESWYIWKHQMTEFSHEYWTVAVDIK---TNFRTIADRYFLVDSL 138
+ + +H WY K + H AV++ + R I + +
Sbjct: 2 ERKHHFVLVHNAYHGAWIWYKLKPLLESAGHR--VTAVELAASGIDPRPIQAVETVDEYS 59
Query: 139 KVFLDHLGR----NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPA 185
K ++ L IL+G FGG + D +P + + +NA P
Sbjct: 60 KPLIETLKSLPENEEVILVGFSFGGINIALAADIFPAKIKVLVFLNAFLPD 110
>3k2i_A Acyl-coenzyme A thioesterase 4; alpha/beta hydrolase fold
seven-stranded beta-sandwich, structural genomics,
structural genomics consortium, SGC; 2.40A {Homo
sapiens}
Length = 422
Score = 33.6 bits (76), Expect = 0.040
Identities = 28/209 (13%), Positives = 56/209 (26%), Gaps = 25/209 (11%)
Query: 18 GGSLVWSFLDKYPELVVKSIIINAPHPAVFKQELKKMSQLIKTRFLLSRTIG--AFHENV 75
L+W+ + + + + + P V + E+ R L V
Sbjct: 78 PMGLLWAL--EPEKPFWRFLKRDVQIPFVVELEVLDGHDPEPGRLLCQAQHERHFLPPGV 135
Query: 76 HFNFVSAG-----------SPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKT- 123
V AG P ++ + G ++ + H + T+A+
Sbjct: 136 WRQSVRAGRVRATLFLPPGPGPFPGIIDIFGIGGGLLEYRASLLA-GHGFATLALAYYNF 194
Query: 124 -----NFRTIADRYFL--VDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKS 176
N I+ YF V + + L+G G + S +
Sbjct: 195 EDLPNNMDNISLEYFEEAVCYMLQ-HPQVKGPGIGLLGISLGADICLSMASFLKNVSATV 253
Query: 177 IIINAPHPAVFKQELRGLIVPKSKKEGRH 205
I + + +P + R
Sbjct: 254 SINGSGISGNTAINYKHSSIPPLGYDLRR 282
>1tqh_A Carboxylesterase precursor; tetrahedral intermediate, alpha/beta
hydrolase; 1.63A {Geobacillus stearothermophilus} SCOP:
c.69.1.29 PDB: 1r1d_A* 4diu_A
Length = 247
Score = 33.2 bits (76), Expect = 0.043
Identities = 23/150 (15%), Positives = 48/150 (32%), Gaps = 16/150 (10%)
Query: 91 LFLHGFPESWYIWKHQMTEFSHEYWTV-AVDI--------KTNFRTIADRYFLVDSLKVF 141
L LHGF + + + +T A + D + V + F
Sbjct: 20 LLLHGFTGNSADVRMLGRFLESKGYTCHAPIYKGHGVPPEELVHTGPDDWWQDVMNGYEF 79
Query: 142 LDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAP----HPAVFKQELRGLIVP 197
L + G + + G GG P + + + AP + +
Sbjct: 80 LKNKGYEKIAVAGLSLGGVFSLKLGYTVP--IEGIVTMCAPMYIKSEETMYEGVLEYARE 137
Query: 198 KSKKEGRHD-IGESQPFRERTFSIQAIRFL 226
K+EG+ + E + + + ++ ++ L
Sbjct: 138 YKKREGKSEEQIEQEMEKFKQTPMKTLKAL 167
>1wm1_A Proline iminopeptidase; complex with inhibitor, hydrolase; HET:
PTB; 2.10A {Serratia marcescens} SCOP: c.69.1.7 PDB:
1qtr_A* 1x2b_A* 1x2e_A*
Length = 317
Score = 33.2 bits (75), Expect = 0.052
Identities = 19/104 (18%), Positives = 41/104 (39%), Gaps = 7/104 (6%)
Query: 82 AGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRTIADRYF-------L 134
+G+P +F+HG P H+ Y + D + R+ L
Sbjct: 32 SGNPNGKPAVFIHGGPGGGISPHHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTWHL 91
Query: 135 VDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSII 178
V ++ + G + ++ G +G +L ++ +PE V + ++
Sbjct: 92 VADIERLREMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVL 135
>3n2z_B Lysosomal Pro-X carboxypeptidase; alpha/beta hydrolase, PRCP,
serine carboxypeptidase, hydrola; HET: NAG; 2.79A {Homo
sapiens}
Length = 446
Score = 33.0 bits (74), Expect = 0.083
Identities = 19/60 (31%), Positives = 27/60 (45%)
Query: 128 IADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVF 187
+AD L+ LK + I IG +GG L F KYP +VV ++ +AP
Sbjct: 106 LADFAELIKHLKRTIPGAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFE 165
Score = 26.8 bits (58), Expect = 8.2
Identities = 14/44 (31%), Positives = 19/44 (43%)
Query: 4 NPCRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVF 47
I IG +GG L F KYP +VV ++ +AP
Sbjct: 122 GAENQPVIAIGGSYGGMLAAWFRMKYPHMVVGALAASAPIWQFE 165
>3rm3_A MGLP, thermostable monoacylglycerol lipase; alpha/beta hydrolase
fold, hydrolase; 1.20A {Bacillus SP}
Length = 270
Score = 32.5 bits (74), Expect = 0.084
Identities = 23/146 (15%), Positives = 50/146 (34%), Gaps = 13/146 (8%)
Query: 91 LFLHGFPESWYIWKHQMTEFSHEYWTV-AVDIK---TNFRTIADRYF--LVDSLKVFLDH 144
L +HGF + + + ++ +TV +K T++ + F V S++
Sbjct: 44 LLVHGFTGTPHSMRPLAEAYAKAGYTVCLPRLKGHGTHYEDMERTTFHDWVASVEEGYGW 103
Query: 145 LGRNRC---ILIGRDFGGSLVWSFLDKYPE---LVVKSIIINAPHPAVFKQELRGLIVPK 198
L + RC + G GG+L + +P+ +V + ++ P A L
Sbjct: 104 L-KQRCQTIFVTGLSMGGTLTLYLAEHHPDICGIVPINAAVDIPAIAAGMTGGGELPRYL 162
Query: 199 SKKEGRHDIGESQPFRERTFSIQAIR 224
+ + ++
Sbjct: 163 DSIGSDLKNPDVKELAYEKTPTASLL 188
>1xkl_A SABP2, salicylic acid-binding protein 2; alpha-beta protein,
structural genomics, protein structure initiative, PSI;
HET: STH; 2.00A {Nicotiana tabacum} SCOP: c.69.1.20 PDB:
1y7i_A* 1y7h_A*
Length = 273
Score = 32.6 bits (74), Expect = 0.088
Identities = 24/113 (21%), Positives = 43/113 (38%), Gaps = 18/113 (15%)
Query: 86 KNPLMLFLHGF---PESWYIWKHQMTEFSHEYWTVAVD---------IKTNFRTIADRYF 133
+ + +HG SWY K + H+ A+D RT+ D
Sbjct: 3 EGKHFVLVHGACHGGWSWYKLKPLLEAAGHK--VTALDLAASGTDLRKIEELRTLYD--- 57
Query: 134 LVDSLKVFLDHLGRNR-CILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPA 185
L ++ L + IL+G GG + ++KYP+ + ++ + A P
Sbjct: 58 YTLPLMELMESLSADEKVILVGHSLGGMNLGLAMEKYPQKIYAAVFLAAFMPD 110
>1jfr_A Lipase; serine hydrolase; 1.90A {Streptomyces exfoliatus} SCOP:
c.69.1.16
Length = 262
Score = 32.3 bits (73), Expect = 0.094
Identities = 13/87 (14%), Positives = 21/87 (24%), Gaps = 8/87 (9%)
Query: 81 SAGSPKNPLMLFLHGFPESWYIWKHQMTEF-SHEYWTVAVDIKTNFRTIADR----YFLV 135
S ++ GF S + +D T R +
Sbjct: 48 STADGTFGAVVISPGFTAYQSSIAWLGPRLASQGFVVFTIDTNTTLDQPDSRGRQLLSAL 107
Query: 136 DSLK---VFLDHLGRNRCILIGRDFGG 159
D L + R ++G GG
Sbjct: 108 DYLTQRSSVRTRVDATRLGVMGHSMGG 134
>3ds8_A LIN2722 protein; unkonwn function, structural genomics, PSI, MCSG,
P structure initiative; 1.80A {Listeria innocua}
Length = 254
Score = 32.1 bits (72), Expect = 0.11
Identities = 19/148 (12%), Positives = 40/148 (27%), Gaps = 35/148 (23%)
Query: 91 LFLHGFPESWYIWKHQMTEFSHEYW------TVAVD-------------------IKTNF 125
+ +HG + + +EY T+ V+ IK F
Sbjct: 7 ILIHGSGGNASSLDKMADQLMNEYRSSNEALTMTVNSEGKIKFEGKLTKDAKRPIIKFGF 66
Query: 126 RTIADRYF-----LVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPEL-----VVK 175
L +++ G + +G GG + + + Y + K
Sbjct: 67 EQNQATPDDWSKWLKIAMEDLKSRYGFTQMDGVGHSNGGLALTYYAEDYAGDKTVPTLRK 126
Query: 176 SIIINAPHPAVFKQELRGLIVPKSKKEG 203
+ I +P + + + K
Sbjct: 127 LVAIGSPFNDLDPNDNGMDLSFKKLPNS 154
>1azw_A Proline iminopeptidase; aminopeptidase, serine protease,
xanthomonas campestris; 2.70A {Xanthomonas citri} SCOP:
c.69.1.7
Length = 313
Score = 31.3 bits (70), Expect = 0.24
Identities = 27/140 (19%), Positives = 52/140 (37%), Gaps = 12/140 (8%)
Query: 83 GSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRTIADRYF-------LV 135
G+P ++ LHG P K + +Y V D + + R+ LV
Sbjct: 30 GNPHGKPVVMLHGGPGGGCNDKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTTWDLV 89
Query: 136 DSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAV-----FKQE 190
++ HLG +R + G +G +L ++ +P+ V + ++ F QE
Sbjct: 90 ADIERLRTHLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLLRRFELEWFYQE 149
Query: 191 LRGLIVPKSKKEGRHDIGES 210
+ P + + + I
Sbjct: 150 GASRLFPDAWEHYLNAIPPV 169
>3dkr_A Esterase D; alpha beta hydrolase, mechanism, catalytic triad,
rotation; 1.60A {Lactobacillus rhamnosus} PDB: 3dlt_A
3dyi_A 3dyv_A 3e1g_A
Length = 251
Score = 31.0 bits (70), Expect = 0.25
Identities = 13/101 (12%), Positives = 27/101 (26%), Gaps = 10/101 (9%)
Query: 91 LFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTNFRTIADRYFL--------VDSLKVFL 142
+ LH + S + V V + + T+ L +
Sbjct: 26 VLLHAYTGSPNDMNFMARALQRSGYGVYVPLFSGHGTVEPLDILTKGNPDIWWAESSAAV 85
Query: 143 DHLGR--NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINA 181
H+ + + G GG L+ P + + +
Sbjct: 86 AHMTAKYAKVFVFGLSLGGIFAMKALETLPGITAGGVFSSP 126
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna;
HET: CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 30.3 bits (67), Expect = 0.26
Identities = 6/12 (50%), Positives = 8/12 (66%)
Query: 48 KQELKKMSQLIK 59
KQ LKK+ +K
Sbjct: 19 KQALKKLQASLK 30
Score = 27.6 bits (60), Expect = 2.8
Identities = 8/37 (21%), Positives = 14/37 (37%), Gaps = 13/37 (35%)
Query: 188 KQELRGLIVPKSKKEGRHDI--GESQPFRERTFSIQA 222
KQ L+ L + + +S P +I+A
Sbjct: 19 KQALKKL-------QASLKLYADDSAP----ALAIKA 44
>1ufo_A Hypothetical protein TT1662; alpha-beta fold, hydrolase, structural
genomics, riken structural genomics/proteomics
initiative, RSGI; 1.60A {Thermus thermophilus} SCOP:
c.69.1.27
Length = 238
Score = 30.9 bits (69), Expect = 0.27
Identities = 18/126 (14%), Positives = 32/126 (25%), Gaps = 20/126 (15%)
Query: 86 KNPLMLFLHGFPESWYIWKHQMTEFSHE-YWTVAVDI-------KTNFRTIADRYF---- 133
L+L LHG S + ++ + +A D + + RY
Sbjct: 23 PKALLLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVY 82
Query: 134 -----LVDSLKVFLDHLGRN---RCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPA 185
+ + + R L G G + L + I + P
Sbjct: 83 RVALGFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFPM 142
Query: 186 VFKQEL 191
Q
Sbjct: 143 KLPQGQ 148
>2c1l_A Restriction endonuclease; BFII, domain fusion, hydrolase; HET: TAR
TLA SRT MES; 1.9A {Bacillus firmus}
Length = 358
Score = 30.6 bits (68), Expect = 0.45
Identities = 17/123 (13%), Positives = 35/123 (28%), Gaps = 11/123 (8%)
Query: 67 TIGAFHENVHFNFVSAGSPKNPLM-----LFLHGFPESWYIWKHQMTEFSHEYWTVAVDI 121
T +N+ + + + + + ++W+I + W + D
Sbjct: 127 TGPGMSQNIEASLLLDNNTTQSMGFSWNDMISEMLNQNWHIHNMTNATDASPGWNLLYDE 186
Query: 122 KTNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGG---SLVWSFLDKYPELVVKSII 178
+T T+ + + + L H R G W D Y + I
Sbjct: 187 RTTNLTLDETERVTLIVT--LGHADTARIQAAPGTTAGQGTQYFWLSKDSY-DFFPPLTI 243
Query: 179 INA 181
N
Sbjct: 244 RNR 246
>1l7a_A Cephalosporin C deacetylase; structural genomics, alpha-beta-alpha
sandwich, PSI, protein structure initiative; 1.50A
{Bacillus subtilis} SCOP: c.69.1.25 PDB: 1odt_C 1ods_A
3fvt_A 3fvr_A 3fyu_A* 2xlb_A 2xlc_A 3fyt_A* 3fyu_B*
Length = 318
Score = 30.1 bits (68), Expect = 0.47
Identities = 9/41 (21%), Positives = 18/41 (43%), Gaps = 1/41 (2%)
Query: 82 AGSPKNPLMLFLHGFPESWYIWKHQMTEF-SHEYWTVAVDI 121
+P ++ HG+ S+ H+M + H Y T + +
Sbjct: 77 DKEGPHPAIVKYHGYNASYDGEIHEMVNWALHGYATFGMLV 117
>3hlk_A Acyl-coenzyme A thioesterase 2, mitochondrial; alpha/beta
hydrolase, alternative splicing, hydrolase,
mitochondrion, polymorphism, serine esterase; 2.10A
{Homo sapiens}
Length = 446
Score = 30.5 bits (68), Expect = 0.49
Identities = 17/131 (12%), Positives = 37/131 (28%), Gaps = 12/131 (9%)
Query: 76 HFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEF-SHEYWTVAVDIKT------NFRTI 128
F+ P ++ + G ++ + + +A+ T+
Sbjct: 163 GTLFLPPEPGPFPGIVDMFGTGGGLLEYRASL--LAGKGFAVMALAYYNYEDLPKTMETL 220
Query: 129 ADRYFL--VDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAV 186
YF ++ L + L+G GG L S + +I +
Sbjct: 221 HLEYFEEAMNYLLS-HPEVKGPGVGLLGISKGGELCLSMASFLKGITAAVVINGSVANVG 279
Query: 187 FKQELRGLIVP 197
+G +P
Sbjct: 280 GTLRYKGETLP 290
>1tht_A Thioesterase; 2.10A {Vibrio harveyi} SCOP: c.69.1.13
Length = 305
Score = 30.0 bits (67), Expect = 0.62
Identities = 15/141 (10%), Positives = 34/141 (24%), Gaps = 18/141 (12%)
Query: 81 SAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHE-YWTVAVDIKTNFR------------- 126
KN +L GF + S + D
Sbjct: 29 ENVPFKNNTILIASGFARRMDHFAGLAEYLSTNGFHVFRYD----SLHHVGLSSGSIDEF 84
Query: 127 TIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAV 186
T+ + ++ +L G LI + + + + + +
Sbjct: 85 TMTTGKNSLCTVYHWLQTKGTQNIGLIAASLSARVAYEVISDLELSFLITAVGVVNLRDT 144
Query: 187 FKQELRGLIVPKSKKEGRHDI 207
++ L + E +D+
Sbjct: 145 LEKALGFDYLSLPIDELPNDL 165
>3azo_A Aminopeptidase; POP family, hydrolase; 2.00A {Streptomyces
morookaensis} PDB: 3azp_A 3azq_A
Length = 662
Score = 29.4 bits (66), Expect = 1.1
Identities = 10/56 (17%), Positives = 17/56 (30%), Gaps = 11/56 (19%)
Query: 76 HFNFVSAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHE--YWT---VAVDIKTNFR 126
+F P ++ HG P S + Y+T + V N+
Sbjct: 413 SPDFTGPADELPPYVVMAHGGPTSRVPA-----VLDLDVAYFTSRGIGV-ADVNYG 462
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 28.9 bits (64), Expect = 1.8
Identities = 28/184 (15%), Positives = 58/184 (31%), Gaps = 48/184 (26%)
Query: 30 PELVVKSIIIN--APHP--AV---FKQELKKMSQLIKTRFLLSRTIG-AFHENVHFNFVS 81
P ++ S+ N P P ++ +++++ + + + + N N V
Sbjct: 321 PSILEDSLENNEGVPSPMLSISNLTQEQVQDYVNKTNSHLPAGKQVEISLV-NGAKNLVV 379
Query: 82 AGSPKNPLMLFLHGF---------PESWYIWKHQMTEFSHEYWTVAVDIKTNFRTIADRY 132
+G P++ L+G P + FS + F +A +
Sbjct: 380 SGPPQS-----LYGLNLTLRKAKAPSGLDQSR---IPFSER----KLKFSNRFLPVASPF 427
Query: 133 ---FLVDSLKVFLDHLGRNRCILIGRDFGGSL---VWSFLD-----KYPELVVKSI---I 178
LV + + L +N +D + V+ D + + I I
Sbjct: 428 HSHLLVPASDLINKDLVKNNVSFNAKD----IQIPVYDTFDGSDLRVLSGSISERIVDCI 483
Query: 179 INAP 182
I P
Sbjct: 484 IRLP 487
>3llc_A Putative hydrolase; structural genomics, joint center for ST
genomics, JCSG, protein structure initiative, PSI-2;
HET: MSE PG4; 1.80A {Agrobacterium vitis}
Length = 270
Score = 28.5 bits (63), Expect = 1.8
Identities = 6/46 (13%), Positives = 20/46 (43%), Gaps = 1/46 (2%)
Query: 51 LKKMSQLIKTRFLLSRTIGAFHENVHFNFVSAGSPKNPLMLFLHGF 96
+ + + I+T + + G+ ++ + + P ++L G+
Sbjct: 2 MTNVGRPIETHAI-TVGQGSDARSIAALVRAPAQDERPTCIWLGGY 46
>3o4h_A Acylamino-acid-releasing enzyme; alpha/beta hydrolase fold, beta
propeller, hydrolase, oligop SIZE selectivity; HET: GOL;
1.82A {Aeropyrum pernix} PDB: 3o4i_A 3o4j_A 2hu5_A*
1ve7_A* 1ve6_A* 2hu7_A* 3o4g_A 2hu8_A* 2qr5_A 2qzp_A
Length = 582
Score = 27.9 bits (62), Expect = 3.2
Identities = 7/49 (14%), Positives = 14/49 (28%), Gaps = 11/49 (22%)
Query: 83 GSPKNPLMLFLHGFPESWYIWKHQMTEFSHE--YWT---VAVDIKTNFR 126
P ++ +HG P + + V + N+R
Sbjct: 356 APTPGPTVVLVHGGPFAEDSD-----SWDTFAASLAAAGFHV-VMPNYR 398
>2qs9_A Retinoblastoma-binding protein 9; B5T overexpressed gene protein,
BOG, RBBP9, RBBP10, HR2978, NESG, structural genomics,
PSI-2; 1.72A {Homo sapiens}
Length = 194
Score = 27.0 bits (59), Expect = 4.2
Identities = 19/136 (13%), Positives = 46/136 (33%), Gaps = 11/136 (8%)
Query: 83 GSPKNPLMLFLHGF----PESWYIWKHQMTEFSHEYWTVAVDIKTNFRTIADRYFLVDSL 138
SP +++ +G WY W + E + +A ++ A + +
Sbjct: 2 ASPSKAVIVPGNGGGDVTTHGWYGWVKKELEKIPGFQCLAKNMPDPIT--ARESIWLPFM 59
Query: 139 KVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINAPHPAVFKQELRGLIVPK 198
+ L + I+IG G + + + V +I++ + + + E
Sbjct: 60 ETELHC--DEKTIIIGHSSGAIAAMRYAETHR---VYAIVLVSAYTSDLGDENERASGYF 114
Query: 199 SKKEGRHDIGESQPFR 214
++ I + P+
Sbjct: 115 TRPWQWEKIKANCPYI 130
>3l8w_A Uricase, urate oxidase; oxidoreductase, URIC acid degradation,
xanthine, inhibition aspergillus flavus, peroxisome,
purine metabolism; HET: XAN 4PO; 1.00A {Aspergillus
flavus} PDB: 3l9g_A* 3lbg_A* 3ld4_A* 3bk8_A* 1r4s_A*
1r51_A* 1r56_A 1r4u_A* 1ws2_A* 1ws3_A 1xt4_A* 1xxj_A*
1xy3_A* 2fub_A* 2fxl_A* 3bjp_A* 1wrr_A* 3gko_A* 3p9o_A
2ic0_A* ...
Length = 296
Score = 27.5 bits (61), Expect = 4.2
Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 23/103 (22%)
Query: 105 HQMTEFSHEYWTVAV----DIKTNFRTIADRYFLV--DSLKVFLDHLGRNRCILIGRDFG 158
+ E TV V +I+T++ T AD +V DS+K + + + FG
Sbjct: 28 QTVYE-----MTVCVLLEGEIETSY-TKADNSVIVATDSIKNTIYITAKQNPVTPPELFG 81
Query: 159 GSLVWSFLDKYPELVVKSIII-----------NAPHPAVFKQE 190
L F++KY + + I PHP F ++
Sbjct: 82 SILGTHFIEKYNHIHAAHVNIVCHRWTRMDIDGKPHPHSFIRD 124
>3q8g_A CRAL-TRIO domain-containing protein YKL091C; string motif,
signaling protein, directed evoluti SEC14, phospholipid
transporter, lipid; HET: PEE; 1.80A {Saccharomyces
cerevisiae} PDB: 3b7n_A* 3b74_A* 3b7q_A* 3b7z_A*
Length = 320
Score = 27.1 bits (60), Expect = 4.9
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 15 RDFGGSLVWSFLDKYPELVVKSIIINAPH--PAVFK 48
+ + + YPE + K II++P +FK
Sbjct: 203 LSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFK 238
Score = 27.1 bits (60), Expect = 4.9
Identities = 9/36 (25%), Positives = 16/36 (44%), Gaps = 2/36 (5%)
Query: 155 RDFGGSLVWSFLDKYPELVVKSIIINAPH--PAVFK 188
+ + + YPE + K II++P +FK
Sbjct: 203 LSYIKDVADISQNYYPERMGKFYIIHSPFGFSTMFK 238
>3d0k_A Putative poly(3-hydroxybutyrate) depolymerase LPQ; alpha-beta-alpha
sandwich, structural genomics, PSI-2; 1.83A {Bordetella
parapertussis 12822}
Length = 304
Score = 27.0 bits (58), Expect = 5.5
Identities = 13/124 (10%), Positives = 32/124 (25%), Gaps = 25/124 (20%)
Query: 84 SPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDIKTN---------------FRTI 128
+P P+++ HG + ++ + + + V + F
Sbjct: 51 TPDRPVVVVQHGVLRNGADYRDFWIPAADRHKLLIVAPTFSDEIWPGVESYNNGRAFTAA 110
Query: 129 ADRYFLVDSLKVFLDHLG----------RNRCILIGRDFGGSLVWSFLDKYPELVVKSII 178
+ + + + + L G GG V + P ++
Sbjct: 111 GNPRHVDGWTYALVARVLANIRAAEIADCEQVYLFGHSAGGQFVHRLMSSQPHAPFHAVT 170
Query: 179 INAP 182
P
Sbjct: 171 AANP 174
>1su8_A CODH 2, carbon monoxide dehydrogenase 2; nickel, cluster C,
oxidoreductase; HET: NFS; 1.10A {Carboxydothermus
hydrogenoformans} SCOP: e.26.1.2 PDB: 1su6_A* 1su7_A*
1suf_A* 2yiv_X* 3b51_X 3b52_X 3b53_X 3i39_X
Length = 636
Score = 27.3 bits (60), Expect = 5.8
Identities = 10/47 (21%), Positives = 19/47 (40%), Gaps = 3/47 (6%)
Query: 90 MLFLHGFPESWYIWKHQMTEFSHEYWTVAVD---IKTNFRTIADRYF 133
+L HG P + +M + + +D I+ + TIA+
Sbjct: 300 VLMRHGIPACTHSVSQEMAMITGALDAMILDYQCIQPSVATIAECTG 346
>2zyr_A Lipase, putative; fatty acid, hydrolase; HET: 1PE; 1.77A
{Archaeoglobus fulgidus} PDB: 2zys_A* 2zyi_A* 2zyh_A*
Length = 484
Score = 26.8 bits (58), Expect = 6.1
Identities = 8/38 (21%), Positives = 16/38 (42%), Gaps = 1/38 (2%)
Query: 81 SAGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVA 118
+A P+ +F+HG S ++ Q F+ +
Sbjct: 17 AAAEDFRPV-VFVHGLAGSAGQFESQGMRFAANGYPAE 53
>1aua_A Phosphatidylinositol transfer protein SEC14P; phospholipid-binding
protein, peripheral golgi membrane protein, phospholipid
exchange; HET: BOG; 2.50A {Saccharomyces cerevisiae}
SCOP: a.5.3.1 c.13.1.1
Length = 296
Score = 26.6 bits (59), Expect = 6.5
Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
Query: 29 YPELVVKSIIINAPH--PAVFK 48
YPE + K IINAP F+
Sbjct: 202 YPERMGKFYIINAPFGFSTAFR 223
Score = 26.6 bits (59), Expect = 6.5
Identities = 10/22 (45%), Positives = 12/22 (54%), Gaps = 2/22 (9%)
Query: 169 YPELVVKSIIINAPH--PAVFK 188
YPE + K IINAP F+
Sbjct: 202 YPERMGKFYIINAPFGFSTAFR 223
>1olm_A SEC14-like protein 2; lipid-binding protein, cholesterol
biosynthesis, oxidized vitamin E, lipid-binding,
transport, transcription regulation; HET: VTQ; 1.95A
{Homo sapiens} SCOP: a.5.3.1 b.132.1.1 c.13.1.1 PDB:
1o6u_A* 1olm_E*
Length = 403
Score = 26.5 bits (58), Expect = 7.9
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 13 IGRDFGGSLVWSFLDKYPELVVKSIIINAP 42
+ G + F + YPE + + ++ AP
Sbjct: 166 PAVEAYGEFLCMFEENYPETLKRLFVVKAP 195
Score = 26.5 bits (58), Expect = 7.9
Identities = 7/30 (23%), Positives = 14/30 (46%)
Query: 153 IGRDFGGSLVWSFLDKYPELVVKSIIINAP 182
+ G + F + YPE + + ++ AP
Sbjct: 166 PAVEAYGEFLCMFEENYPETLKRLFVVKAP 195
>3fcy_A Xylan esterase 1; alpha/beta hydrolase, carbohydrate esterase, CE7;
2.10A {Thermoanaerobacterium SP}
Length = 346
Score = 26.3 bits (58), Expect = 8.4
Identities = 8/40 (20%), Positives = 19/40 (47%)
Query: 82 AGSPKNPLMLFLHGFPESWYIWKHQMTEFSHEYWTVAVDI 121
K+P ++ HG+ + W ++ + + VA+D+
Sbjct: 103 KTEGKHPALIRFHGYSSNSGDWNDKLNYVAAGFTVVAMDV 142
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.327 0.142 0.448
Gapped
Lambda K H
0.267 0.0636 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 3,588,518
Number of extensions: 210167
Number of successful extensions: 792
Number of sequences better than 10.0: 1
Number of HSP's gapped: 712
Number of HSP's successfully gapped: 175
Length of query: 231
Length of database: 6,701,793
Length adjustment: 90
Effective length of query: 141
Effective length of database: 4,188,903
Effective search space: 590635323
Effective search space used: 590635323
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 56 (25.5 bits)