Your job contains 1 sequence.
>psy13224
MEAAMTAELRPKLRLLHPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIF
TQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGI
NLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR
The BLAST search returned 8 gene products which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13224
(160 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
FB|FBgn0020306 - symbol:dom "domino" species:7227 "Drosop... 713 1.4e-68 1
UNIPROTKB|J9P9W7 - symbol:SRCAP "Uncharacterized protein"... 672 7.6e-65 1
UNIPROTKB|Q6ZRS2 - symbol:SRCAP "Helicase SRCAP" species:... 673 2.5e-64 1
UNIPROTKB|F1RG74 - symbol:SRCAP "Uncharacterized protein"... 672 3.2e-64 1
UNIPROTKB|E1BC33 - symbol:LOC788113 "Uncharacterized prot... 671 4.1e-64 1
RGD|1565642 - symbol:Srcap "Snf2-related CREBBP activator... 663 2.8e-63 1
ASPGD|ASPL0000041040 - symbol:AN9077 species:162425 "Emer... 589 7.6e-56 1
POMBASE|SPAC11E3.01c - symbol:swr1 "SNF2 family helicase ... 577 8.0e-55 1
SGD|S000002742 - symbol:SWR1 "Swi2/Snf2-related ATPase st... 569 8.3e-54 1
DICTYBASE|DDB_G0267638 - symbol:DDB_G0267638 "CHR group p... 573 9.7e-54 1
TAIR|locus:2087780 - symbol:PIE1 "PHOTOPERIOD-INDEPENDENT... 570 1.1e-53 1
WB|WBGene00007027 - symbol:ssl-1 species:6239 "Caenorhabd... 556 4.4e-52 1
CGD|CAL0001763 - symbol:orf19.1871 species:5476 "Candida ... 531 1.1e-49 1
UNIPROTKB|E1C188 - symbol:Gga.53842 "Uncharacterized prot... 433 7.1e-39 1
UNIPROTKB|E1C186 - symbol:Gga.53842 "Uncharacterized prot... 433 7.3e-39 1
MGI|MGI:1276124 - symbol:Ep400 "E1A binding protein p400"... 432 9.2e-39 1
UNIPROTKB|Q96L91 - symbol:EP400 "E1A-binding protein p400... 429 2.0e-38 1
ASPGD|ASPL0000047400 - symbol:AN2285 species:162425 "Emer... 419 9.2e-38 1
ZFIN|ZDB-GENE-041014-72 - symbol:ino80 "INO80 homolog (S.... 418 1.1e-37 1
UNIPROTKB|I3L7Y4 - symbol:EP400 "Uncharacterized protein"... 420 1.5e-37 1
UNIPROTKB|I3LPX4 - symbol:EP400 "Uncharacterized protein"... 420 1.6e-37 1
UNIPROTKB|E2QWV6 - symbol:EP400 "Uncharacterized protein"... 420 1.7e-37 1
UNIPROTKB|L7N089 - symbol:EP400 "Uncharacterized protein"... 420 1.8e-37 1
DICTYBASE|DDB_G0292358 - symbol:ino80 "CHR group protein"... 418 1.8e-37 1
UNIPROTKB|F1NYY9 - symbol:INO80 "Uncharacterized protein"... 415 2.3e-37 1
MGI|MGI:1915392 - symbol:Ino80 "INO80 homolog (S. cerevis... 411 6.2e-37 1
UNIPROTKB|E1BAN8 - symbol:INO80 "Uncharacterized protein"... 411 6.2e-37 1
GENEDB_PFALCIPARUM|PF08_0048 - symbol:PF08_0048 "ATP-depe... 412 7.4e-37 1
UNIPROTKB|C0H4W3 - symbol:PF08_0048 "Probable ATP-depende... 412 7.4e-37 1
RGD|1310969 - symbol:Ino80 "INO80 homolog (S. cerevisiae)... 410 7.9e-37 1
UNIPROTKB|Q9ULG1 - symbol:INO80 "DNA helicase INO80" spec... 410 7.9e-37 1
UNIPROTKB|F1PKX5 - symbol:INO80 "Uncharacterized protein"... 410 7.9e-37 1
UNIPROTKB|F1SSV0 - symbol:INO80 "Uncharacterized protein"... 410 8.0e-37 1
UNIPROTKB|F1MLB1 - symbol:F1MLB1 "Uncharacterized protein... 413 9.8e-37 1
FB|FBgn0086613 - symbol:Ino80 "Ino80" species:7227 "Droso... 405 2.9e-36 1
TAIR|locus:2150270 - symbol:CHR23 "chromatin remodeling 2... 392 3.4e-35 1
POMBASE|SPAC29B12.01 - symbol:ino80 "SNF2 family helicase... 394 4.2e-35 1
CGD|CAL0000831 - symbol:orf19.1734 species:5476 "Candida ... 392 5.5e-35 1
SGD|S000003118 - symbol:INO80 "ATPase and nucleosome spac... 391 7.8e-35 1
UNIPROTKB|E2QW28 - symbol:HELLS "Uncharacterized protein"... 376 1.0e-33 1
WB|WBGene00004204 - symbol:swsn-4 species:6239 "Caenorhab... 377 2.4e-33 1
ASPGD|ASPL0000042729 - symbol:AN2278 species:162425 "Emer... 376 2.8e-33 1
DICTYBASE|DDB_G0271052 - symbol:snf2b "SNF2-related prote... 380 3.3e-33 1
UNIPROTKB|E1BCV0 - symbol:HELLS "Uncharacterized protein"... 371 3.4e-33 1
UNIPROTKB|F1SC64 - symbol:HELLS "Uncharacterized protein"... 370 4.6e-33 1
UNIPROTKB|Q9NW36 - symbol:HELLS "cDNA FLJ10339 fis, clone... 360 5.2e-33 1
CGD|CAL0005444 - symbol:SNF2 species:5476 "Candida albica... 371 1.3e-32 1
UNIPROTKB|Q5AM49 - symbol:SNF2 "Putative uncharacterized ... 371 1.3e-32 1
SGD|S000005816 - symbol:SNF2 "Catalytic subunit of the SW... 370 1.6e-32 1
UNIPROTKB|F1P5V4 - symbol:HELLS "Uncharacterized protein"... 364 2.0e-32 1
MGI|MGI:106209 - symbol:Hells "helicase, lymphoid specifi... 361 4.1e-32 1
UNIPROTKB|F1NH78 - symbol:F1NH78 "Uncharacterized protein... 366 4.7e-32 1
CGD|CAL0003962 - symbol:orf19.239 species:5476 "Candida a... 364 4.8e-32 1
UNIPROTKB|Q9NRZ9 - symbol:HELLS "Lymphoid-specific helica... 360 5.5e-32 1
FB|FBgn0032157 - symbol:Etl1 "Etl1 homologue" species:722... 359 7.2e-32 1
RGD|1309820 - symbol:Hells "helicase, lymphoid specific" ... 349 7.7e-32 1
ZFIN|ZDB-GENE-030131-5964 - symbol:smarca2 "SWI/SNF relat... 363 8.1e-32 1
ZFIN|ZDB-GENE-030131-9923 - symbol:hells "helicase, lymph... 358 9.4e-32 1
SGD|S000001388 - symbol:STH1 "ATPase component of the RSC... 361 1.1e-31 1
UNIPROTKB|F5GWX5 - symbol:CHD4 "Chromodomain-helicase-DNA... 362 1.4e-31 1
UNIPROTKB|E2RHA0 - symbol:CHD4 "Uncharacterized protein" ... 362 1.4e-31 1
UNIPROTKB|Q14839 - symbol:CHD4 "Chromodomain-helicase-DNA... 362 1.4e-31 1
UNIPROTKB|F1SLR5 - symbol:CHD4 "Uncharacterized protein" ... 362 1.4e-31 1
MGI|MGI:1344380 - symbol:Chd4 "chromodomain helicase DNA ... 362 1.4e-31 1
UNIPROTKB|E9PU01 - symbol:Chd4 "Protein Chd4" species:101... 362 1.4e-31 1
FB|FBgn0011604 - symbol:Iswi "Imitation SWI" species:7227... 358 1.4e-31 1
UNIPROTKB|J9NW81 - symbol:CHD4 "Uncharacterized protein" ... 362 1.4e-31 1
UNIPROTKB|F1N3F6 - symbol:CHD4 "Uncharacterized protein" ... 362 1.4e-31 1
UNIPROTKB|F1LM59 - symbol:Chd4 "Protein Chd4" species:101... 362 1.4e-31 1
POMBASE|SPAC1250.01 - symbol:snf21 "ATP-dependent DNA hel... 358 1.8e-31 1
UNIPROTKB|K7EMY3 - symbol:CHD5 "Chromodomain-helicase-DNA... 357 1.9e-31 1
TAIR|locus:2173644 - symbol:CHR1 "chromatin remodeling 1"... 354 1.9e-31 1
RGD|1582725 - symbol:Chd5 "chromodomain helicase DNA bind... 359 2.9e-31 1
TAIR|locus:2051678 - symbol:ETL1 species:3702 "Arabidopsi... 352 3.2e-31 1
UNIPROTKB|H0YJG4 - symbol:CHD8 "Chromodomain-helicase-DNA... 353 3.4e-31 1
UNIPROTKB|F1SSZ2 - symbol:CHD5 "Uncharacterized protein" ... 357 3.9e-31 1
UNIPROTKB|F1N544 - symbol:CHD3 "Uncharacterized protein" ... 358 3.9e-31 1
UNIPROTKB|E2RTI2 - symbol:CHD3 "Uncharacterized protein" ... 358 3.9e-31 1
UNIPROTKB|Q12873 - symbol:CHD3 "Chromodomain-helicase-DNA... 358 3.9e-31 1
UNIPROTKB|F1ST12 - symbol:CHD3 "Uncharacterized protein" ... 358 3.9e-31 1
UNIPROTKB|E9PG89 - symbol:CHD3 "Chromodomain-helicase-DNA... 358 4.0e-31 1
UNIPROTKB|F1RIM3 - symbol:CHD5 "Uncharacterized protein" ... 357 4.0e-31 1
UNIPROTKB|E2R1M3 - symbol:CHD5 "Uncharacterized protein" ... 357 4.3e-31 1
SGD|S000000449 - symbol:ISW1 "ATPase subunit of imitation... 354 4.4e-31 1
UNIPROTKB|F1MFF9 - symbol:Bt.62145 "Uncharacterized prote... 357 4.5e-31 1
UNIPROTKB|Q8TDI0 - symbol:CHD5 "Chromodomain-helicase-DNA... 357 4.8e-31 1
UNIPROTKB|H3BTW3 - symbol:CHD9 "Chromodomain-helicase-DNA... 353 5.4e-31 1
UNIPROTKB|D4A4J2 - symbol:Smarca2 "Protein Smarca2" speci... 355 5.5e-31 1
ASPGD|ASPL0000052010 - symbol:AN1255 species:162425 "Emer... 355 5.5e-31 1
UNIPROTKB|A5PKK5 - symbol:SMARCA2 "SMARCA2 protein" speci... 355 5.7e-31 1
UNIPROTKB|E2RKP4 - symbol:SMARCA2 "Uncharacterized protei... 355 5.7e-31 1
UNIPROTKB|F1SJG5 - symbol:SMARCA2 "Uncharacterized protei... 355 5.7e-31 1
UNIPROTKB|E1BS47 - symbol:CHD7 "Chromodomain-helicase-DNA... 354 5.7e-31 1
UNIPROTKB|J9P5P2 - symbol:SMARCA2 "Uncharacterized protei... 355 5.8e-31 1
MGI|MGI:99603 - symbol:Smarca2 "SWI/SNF related, matrix a... 355 5.8e-31 1
UNIPROTKB|P51531 - symbol:SMARCA2 "Probable global transc... 355 5.9e-31 1
RGD|1302988 - symbol:Smarca2 "SWI/SNF related, matrix ass... 355 5.9e-31 1
UNIPROTKB|E9PTG1 - symbol:Smarca2 "Protein Smarca2" speci... 355 5.9e-31 1
RGD|1311923 - symbol:Chd3 "chromodomain helicase DNA bind... 356 6.0e-31 1
UNIPROTKB|F1LPP7 - symbol:Chd3 "Protein Chd3" species:101... 356 6.4e-31 1
WARNING: Descriptions of 430 database sequences were not reported due to the
limiting value of parameter V = 100.
>FB|FBgn0020306 [details] [associations]
symbol:dom "domino" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=IEA;NAS] [GO:0008283 "cell
proliferation" evidence=NAS] [GO:0016458 "gene silencing"
evidence=IGI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0002165 "instar larval or pupal development"
evidence=IMP] [GO:0006325 "chromatin organization" evidence=IMP]
[GO:0048477 "oogenesis" evidence=IMP] [GO:0005634 "nucleus"
evidence=IC;IDA] [GO:0035207 "negative regulation of hemocyte
proliferation" evidence=TAS] [GO:0030097 "hemopoiesis"
evidence=TAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000381 "regulation of alternative
mRNA splicing, via spliceosome" evidence=IMP] [GO:0000123 "histone
acetyltransferase complex" evidence=IPI] [GO:0045747 "positive
regulation of Notch signaling pathway" evidence=IGI] [GO:0035222
"wing disc pattern formation" evidence=IGI] [GO:0010629 "negative
regulation of gene expression" evidence=IMP] [GO:0005515 "protein
binding" evidence=IPI] [GO:0070983 "dendrite guidance"
evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP] [GO:2000637
"positive regulation of gene silencing by miRNA" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 EMBL:AE013599 GO:GO:0005524
GO:GO:0006355 GO:GO:0003677 GO:GO:0035222 GO:GO:0048477
GO:GO:0016573 GO:GO:0045747 GO:GO:0006351 GO:GO:0007049
GO:GO:0035267 GO:GO:0004386 GO:GO:0030097 GO:GO:0043486
GO:GO:2000637 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016458 InterPro:IPR017877
PROSITE:PS50090 GO:GO:0070983 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 GO:GO:0000381 EMBL:AF076776 EMBL:AF254373
EMBL:AY058653 RefSeq:NP_524833.2 RefSeq:NP_788424.1 UniGene:Dm.7802
ProteinModelPortal:Q9NDJ2 SMR:Q9NDJ2 IntAct:Q9NDJ2 STRING:Q9NDJ2
PaxDb:Q9NDJ2 EnsemblMetazoa:FBtr0071603 GeneID:45655
KEGG:dme:Dmel_CG9696 UCSC:CG9696-RA CTD:45655 FlyBase:FBgn0020306
GeneTree:ENSGT00530000063427 InParanoid:Q9NDJ2 KO:K11320
OMA:TENDASA OrthoDB:EOG4C5B08 PhylomeDB:Q9NDJ2 GenomeRNAi:45655
NextBio:838265 Bgee:Q9NDJ2 GO:GO:0002165 GO:GO:0035207
Uniprot:Q9NDJ2
Length = 3198
Score = 713 (256.0 bits), Expect = 1.4e-68, P = 1.4e-68
Identities = 131/160 (81%), Positives = 146/160 (91%)
Query: 1 MEAAMTAELRPKLRLLHPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIF 60
+E + LRPKL LLHP+ S M T+FPDPRLIQYDCGKLQ++D +LR+LK GHRVLIF
Sbjct: 1621 IENIVDQALRPKLALLHPIISEMTTKFPDPRLIQYDCGKLQTMDRLLRQLKVNGHRVLIF 1680
Query: 61 TQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGI 120
TQMT+MLDVLEAFLN+HGHIYLRLDG+T+V+QRQ+LMERFN D RIFCFILSTRSGGVGI
Sbjct: 1681 TQMTKMLDVLEAFLNYHGHIYLRLDGSTRVEQRQILMERFNGDKRIFCFILSTRSGGVGI 1740
Query: 121 NLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
NLTGADTV+FYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR
Sbjct: 1741 NLTGADTVIFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 1780
>UNIPROTKB|J9P9W7 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00271 PROSITE:PS51194 SMART:SM00384 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
GO:GO:0004386 GeneTree:ENSGT00530000063427 EMBL:AAEX03004381
EMBL:AAEX03004385 EMBL:AAEX03004386 EMBL:AAEX03004382
EMBL:AAEX03004383 EMBL:AAEX03004384 EMBL:AAEX03004387
EMBL:AAEX03004388 Ensembl:ENSCAFT00000045283 OMA:PATANNS
Uniprot:J9P9W7
Length = 1470
Score = 672 (241.6 bits), Expect = 7.6e-65, P = 7.6e-65
Identities = 126/156 (80%), Positives = 138/156 (88%)
Query: 5 MTAELRPKLRLLHPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMT 64
+ EL P+ R LH + M TQFPD RLIQYDCGKLQ+L V+LR+LKA GHRVLIFTQMT
Sbjct: 253 LACELWPRARPLHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMT 312
Query: 65 RMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTG 124
RMLDVLE FL +HGH+YLRLDG+T+V+QRQ LMERFN D RIFCFILSTRSGGVG+NLTG
Sbjct: 313 RMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTG 372
Query: 125 ADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
ADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR
Sbjct: 373 ADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 408
>UNIPROTKB|Q6ZRS2 [details] [associations]
symbol:SRCAP "Helicase SRCAP" species:9606 "Homo sapiens"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0019048 "virus-host interaction" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=TAS] [GO:0004402 "histone
acetyltransferase activity" evidence=TAS] [GO:0006357 "regulation
of transcription from RNA polymerase II promoter" evidence=TAS]
[GO:0016573 "histone acetylation" evidence=TAS] [GO:0005634
"nucleus" evidence=IDA] [GO:0005794 "Golgi apparatus" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0019048 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0006357 GO:GO:0006351 GO:GO:0003713
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC106886 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 GO:GO:0004402
EMBL:AC093249 EMBL:AK128030 EMBL:AB002307 EMBL:BC159099
EMBL:AF143946 IPI:IPI00009101 IPI:IPI00444046 IPI:IPI00550342
RefSeq:NP_006653.2 UniGene:Hs.647334 ProteinModelPortal:Q6ZRS2
SMR:Q6ZRS2 IntAct:Q6ZRS2 MINT:MINT-123408 STRING:Q6ZRS2
PhosphoSite:Q6ZRS2 DMDM:296452947 PaxDb:Q6ZRS2 PRIDE:Q6ZRS2
DNASU:10847 Ensembl:ENST00000262518 Ensembl:ENST00000344771
Ensembl:ENST00000380361 Ensembl:ENST00000395059 GeneID:10847
KEGG:hsa:10847 UCSC:uc002dze.1 UCSC:uc002dzg.1 CTD:10847
GeneCards:GC16P030710 H-InvDB:HIX0012970 HGNC:HGNC:16974
HPA:HPA028929 MIM:136140 MIM:611421 neXtProt:NX_Q6ZRS2
Orphanet:2044 PharmGKB:PA162404706 HOGENOM:HOG000168717
InParanoid:Q6ZRS2 KO:K11661 OMA:LGTGNPQ OrthoDB:EOG4B2SWB
ChiTaRS:SRCAP GenomeRNAi:10847 NextBio:41182 ArrayExpress:Q6ZRS2
Bgee:Q6ZRS2 CleanEx:HS_SRCAP Genevestigator:Q6ZRS2 Uniprot:Q6ZRS2
Length = 3230
Score = 673 (242.0 bits), Expect = 2.5e-64, P = 2.5e-64
Identities = 126/156 (80%), Positives = 139/156 (89%)
Query: 5 MTAELRPKLRLLHPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMT 64
+ +EL P+ R LH + M TQFPD RLIQYDCGKLQ+L V+LR+LKA GHRVLIFTQMT
Sbjct: 2010 LASELWPRARPLHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMT 2069
Query: 65 RMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTG 124
RMLDVLE FL +HGH+YLRLDG+T+V+QRQ LMERFN D RIFCFILSTRSGGVG+NLTG
Sbjct: 2070 RMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTG 2129
Query: 125 ADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
ADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR
Sbjct: 2130 ADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 2165
>UNIPROTKB|F1RG74 [details] [associations]
symbol:SRCAP "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043234 "protein complex" evidence=IEA] [GO:0005794
"Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005794
GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:LGTGNPQ EMBL:FP102572
Ensembl:ENSSSCT00000008537 Uniprot:F1RG74
Length = 3230
Score = 672 (241.6 bits), Expect = 3.2e-64, P = 3.2e-64
Identities = 126/156 (80%), Positives = 138/156 (88%)
Query: 5 MTAELRPKLRLLHPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMT 64
+ EL P+ R LH + M TQFPD RLIQYDCGKLQ+L V+LR+LKA GHRVLIFTQMT
Sbjct: 2010 LACELWPRARPLHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMT 2069
Query: 65 RMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTG 124
RMLDVLE FL +HGH+YLRLDG+T+V+QRQ LMERFN D RIFCFILSTRSGGVG+NLTG
Sbjct: 2070 RMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTG 2129
Query: 125 ADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
ADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR
Sbjct: 2130 ADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 2165
>UNIPROTKB|E1BC33 [details] [associations]
symbol:LOC788113 "Uncharacterized protein" species:9913
"Bos taurus" [GO:0043234 "protein complex" evidence=IEA]
[GO:0005794 "Golgi apparatus" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0005794 GO:GO:0043234 GO:GO:0003677 InterPro:IPR020478
PRINTS:PR00929 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 OMA:LGTGNPQ
EMBL:DAAA02057908 IPI:IPI00705506 Ensembl:ENSBTAT00000018503
Uniprot:E1BC33
Length = 3242
Score = 671 (241.3 bits), Expect = 4.1e-64, P = 4.1e-64
Identities = 126/156 (80%), Positives = 138/156 (88%)
Query: 5 MTAELRPKLRLLHPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMT 64
+ EL P+ R LH + M TQFPD RLIQYDCGKLQ+L V+LR+LKA GHRVLIFTQMT
Sbjct: 2021 LARELWPRARPLHRIVCNMRTQFPDLRLIQYDCGKLQTLAVLLRQLKAEGHRVLIFTQMT 2080
Query: 65 RMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTG 124
RMLDVLE FL +HGH+YLRLDG+T+V+QRQ LMERFN D RIFCFILSTRSGGVG+NLTG
Sbjct: 2081 RMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLTG 2140
Query: 125 ADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
ADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR
Sbjct: 2141 ADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 2176
>RGD|1565642 [details] [associations]
symbol:Srcap "Snf2-related CREBBP activator protein"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005794 "Golgi apparatus" evidence=ISO]
[GO:0043234 "protein complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00384 SMART:SM00490 RGD:1565642
GO:GO:0005524 GO:GO:0005634 GO:GO:0005794 GO:GO:0043234
GO:GO:0003677 InterPro:IPR020478 PRINTS:PR00929 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 OrthoDB:EOG4B2SWB
IPI:IPI00778475 Ensembl:ENSRNOT00000054997 UCSC:RGD:1565642
ArrayExpress:D3ZWX7 Uniprot:D3ZWX7
Length = 3182
Score = 663 (238.4 bits), Expect = 2.8e-63, P = 2.8e-63
Identities = 126/157 (80%), Positives = 138/157 (87%)
Query: 5 MTAELRPKLRLLHPVTSAMCTQFPDPRLIQYDC-GKLQSLDVILRKLKAGGHRVLIFTQM 63
+ EL P+ R LH + M TQFPD RLIQYDC GKLQ+L V+LR+LKA GHRVLIFTQM
Sbjct: 1997 LACELWPRARPLHRIVCNMRTQFPDLRLIQYDCAGKLQTLAVLLRQLKAEGHRVLIFTQM 2056
Query: 64 TRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLT 123
TRMLDVLE FL +HGH+YLRLDG+T+V+QRQ LMERFN D RIFCFILSTRSGGVG+NLT
Sbjct: 2057 TRMLDVLEQFLTYHGHLYLRLDGSTRVEQRQALMERFNADKRIFCFILSTRSGGVGVNLT 2116
Query: 124 GADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
GADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR
Sbjct: 2117 GADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 2153
>ASPGD|ASPL0000041040 [details] [associations]
symbol:AN9077 species:162425 "Emericella nidulans"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0000812 "Swr1
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001306 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 EMBL:AACD01000169 KO:K11681
RefSeq:XP_682346.1 STRING:Q5ARK3 GeneID:2868023 KEGG:ani:AN9077.2
HOGENOM:HOG000186095 OMA:YGNQEER OrthoDB:EOG49S9FK Uniprot:Q5ARK3
Length = 1698
Score = 589 (212.4 bits), Expect = 7.6e-56, P = 7.6e-56
Identities = 109/144 (75%), Positives = 119/144 (82%)
Query: 17 HPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNF 76
H + FPD RL+QYDCGKLQ LD +LR LKAGGHR LIFTQMT+MLDVLE FLN
Sbjct: 1352 HEAQMRLSIAFPDKRLLQYDCGKLQRLDKLLRDLKAGGHRALIFTQMTKMLDVLEQFLNI 1411
Query: 77 HGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWN 136
HGH YLRLDGTTKV+QRQ+L +RFN D RI FILS+RSGG+GINLTGADTV+FYD DWN
Sbjct: 1412 HGHRYLRLDGTTKVEQRQILTDRFNNDNRILAFILSSRSGGLGINLTGADTVIFYDLDWN 1471
Query: 137 PTMDAQAQDRCHRIGQTRDVHIYR 160
P MD Q QDRCHRIGQTRDVHIYR
Sbjct: 1472 PAMDKQCQDRCHRIGQTRDVHIYR 1495
>POMBASE|SPAC11E3.01c [details] [associations]
symbol:swr1 "SNF2 family helicase Swr1" species:4896
"Schizosaccharomyces pombe" [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=ISM] [GO:0005524
"ATP binding" evidence=ISM] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=IPI] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0043486 "histone exchange" evidence=ISO] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 PomBase:SPAC11E3.01c GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0000812 GO:GO:0004003 GO:GO:0043486
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 PROSITE:PS51204 KO:K11681 HOGENOM:HOG000186095
OrthoDB:EOG49S9FK PIR:T37528 RefSeq:XP_001713118.1
ProteinModelPortal:O13682 STRING:O13682 EnsemblFungi:SPAC11E3.01c.1
GeneID:3361561 KEGG:spo:SPAC11E3.01c OMA:VKNEREG NextBio:20811602
Uniprot:O13682
Length = 1288
Score = 577 (208.2 bits), Expect = 8.0e-55, P = 8.0e-55
Identities = 107/153 (69%), Positives = 126/153 (82%)
Query: 8 ELRPKLRLLHPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRML 67
E+ K+ LH ++ + FPD RL+QYDCGKLQ LD +L+ L + GHRVLIFTQMT++L
Sbjct: 961 EVSRKINPLHQASTRLAIAFPDKRLLQYDCGKLQVLDRLLKDLVSNGHRVLIFTQMTKVL 1020
Query: 68 DVLEAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADT 127
D+LE FLN HGH YLRLDG TK++QRQ+L ERFN D +I FILSTRSGG+GINLTGADT
Sbjct: 1021 DILEQFLNIHGHRYLRLDGATKIEQRQILTERFNNDDKIPVFILSTRSGGLGINLTGADT 1080
Query: 128 VVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
V+FYDSDWNP +DAQAQDR HRIGQTRDVHIYR
Sbjct: 1081 VIFYDSDWNPQLDAQAQDRSHRIGQTRDVHIYR 1113
>SGD|S000002742 [details] [associations]
symbol:SWR1 "Swi2/Snf2-related ATPase structural component of
the SWR1 complex" species:4932 "Saccharomyces cerevisiae"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000812 "Swr1 complex"
evidence=IDA] [GO:0005634 "nucleus" evidence=IEA;IDA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IGI;IMP;IDA] [GO:0005198 "structural molecule
activity" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SGD:S000002742 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
GO:GO:0005198 EMBL:BK006938 GO:GO:0006351 GO:GO:0000812
GO:GO:0004386 GO:GO:0043486 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427
EMBL:U51032 KO:K11681 HOGENOM:HOG000186095 OrthoDB:EOG49S9FK
PIR:S70099 RefSeq:NP_010621.1 ProteinModelPortal:Q05471 SMR:Q05471
DIP:DIP-2845N IntAct:Q05471 MINT:MINT-1165514 STRING:Q05471
PaxDb:Q05471 EnsemblFungi:YDR334W GeneID:851934 KEGG:sce:YDR334W
CYGD:YDR334w OMA:APGFKVL NextBio:970001 Genevestigator:Q05471
GermOnline:YDR334W Uniprot:Q05471
Length = 1514
Score = 569 (205.4 bits), Expect = 8.3e-54, P = 8.3e-54
Identities = 101/145 (69%), Positives = 122/145 (84%)
Query: 16 LHPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLN 75
LH + + + FPD L+QYDCGKLQ L ++L++LK GHR LIFTQMT++LDVLE FLN
Sbjct: 1224 LHQLQTKLTIAFPDKSLLQYDCGKLQKLAILLQQLKDNGHRALIFTQMTKVLDVLEQFLN 1283
Query: 76 FHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDW 135
+HG++Y+RLDG TK++ RQ+L ERFN D+RI FILS+RSGG+GINLTGADTV+FYDSDW
Sbjct: 1284 YHGYLYMRLDGATKIEDRQILTERFNTDSRITVFILSSRSGGLGINLTGADTVIFYDSDW 1343
Query: 136 NPTMDAQAQDRCHRIGQTRDVHIYR 160
NP MD Q QDRCHRIGQTRDVHIYR
Sbjct: 1344 NPAMDKQCQDRCHRIGQTRDVHIYR 1368
>DICTYBASE|DDB_G0267638 [details] [associations]
symbol:DDB_G0267638 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0267638 GO:GO:0005524
GO:GO:0003677 EMBL:AAFI02000003 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR014012 PROSITE:PS51204 KO:K11320 RefSeq:XP_647182.1
ProteinModelPortal:Q55GK2 EnsemblProtists:DDB0220518 GeneID:8615986
KEGG:ddi:DDB_G0267638 InParanoid:Q55GK2 OMA:ISFEAFA Uniprot:Q55GK2
Length = 3069
Score = 573 (206.8 bits), Expect = 9.7e-54, P = 9.7e-54
Identities = 104/144 (72%), Positives = 122/144 (84%)
Query: 17 HPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNF 76
+P M FPD RLIQYDCGKLQ L ++LR+LK GHR LIFTQMT+MLD+ E FLN
Sbjct: 1358 YPSYQRMKLYFPDKRLIQYDCGKLQQLAILLRRLKQQGHRALIFTQMTKMLDIFETFLNL 1417
Query: 77 HGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWN 136
H + YLRLDG+TK+D+RQVL ERFN D +IF FILSTRSGG+G+NLTGADTV+FYD+DWN
Sbjct: 1418 HAYTYLRLDGSTKIDKRQVLTERFNTDPKIFLFILSTRSGGLGLNLTGADTVIFYDTDWN 1477
Query: 137 PTMDAQAQDRCHRIGQTRDVHIYR 160
P+MDAQAQDRCHRIGQTR+V+IYR
Sbjct: 1478 PSMDAQAQDRCHRIGQTREVNIYR 1501
>TAIR|locus:2087780 [details] [associations]
symbol:PIE1 "PHOTOPERIOD-INDEPENDENT EARLY FLOWERING 1"
species:3702 "Arabidopsis thaliana" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0009910 "negative regulation of flower development"
evidence=IGI] [GO:0016514 "SWI/SNF complex" evidence=ISS]
[GO:0048441 "petal development" evidence=IGI] [GO:0048451 "petal
formation" evidence=IGI;RCA] [GO:0005618 "cell wall" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0042742 "defense
response to bacterium" evidence=IGI;RCA] [GO:0046686 "response to
cadmium ion" evidence=IEP] [GO:0000278 "mitotic cell cycle"
evidence=RCA] [GO:0003002 "regionalization" evidence=RCA]
[GO:0006338 "chromatin remodeling" evidence=RCA] [GO:0007155 "cell
adhesion" evidence=RCA] [GO:0009793 "embryo development ending in
seed dormancy" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0010090 "trichome morphogenesis"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0033043 "regulation of
organelle organization" evidence=RCA] [GO:0045010 "actin
nucleation" evidence=RCA] [GO:0048449 "floral organ formation"
evidence=RCA] [GO:0048453 "sepal formation" evidence=RCA]
[GO:0048765 "root hair cell differentiation" evidence=RCA]
[GO:0071555 "cell wall organization" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005618
GO:GO:0046686 EMBL:CP002686 GO:GO:0003677 GO:GO:0042742
GO:GO:0003682 Gene3D:1.10.10.60 GO:GO:0016514 GO:GO:0004386
GO:GO:0009910 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 KO:K11320 GO:GO:0048451
EMBL:AY279398 IPI:IPI00545059 RefSeq:NP_187887.3 UniGene:At.39549
SMR:Q7X9V2 IntAct:Q7X9V2 STRING:Q7X9V2 EnsemblPlants:AT3G12810.1
GeneID:820463 KEGG:ath:AT3G12810 TAIR:At3g12810 InParanoid:Q7X9V2
OMA:CCHPPPS ProtClustDB:CLSN2680833 Genevestigator:Q7X9V2
Uniprot:Q7X9V2
Length = 2055
Score = 570 (205.7 bits), Expect = 1.1e-53, P = 1.1e-53
Identities = 107/156 (68%), Positives = 125/156 (80%)
Query: 5 MTAELRPKLRLLHPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMT 64
+T L P L + P FPD RLIQ+DCGKLQ L ++LRKLK GGHR LIFTQMT
Sbjct: 1042 VTDLLSPLLSPIRPAIVRRQVYFPDRRLIQFDCGKLQELAMLLRKLKFGGHRALIFTQMT 1101
Query: 65 RMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTG 124
+MLDVLEAF+N +G+ Y+RLDG+T ++RQ LM+RFN + +IF FILSTRSGGVGINL G
Sbjct: 1102 KMLDVLEAFINLYGYTYMRLDGSTPPEERQTLMQRFNTNPKIFLFILSTRSGGVGINLVG 1161
Query: 125 ADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
ADTV+FYDSDWNP MD QAQDRCHRIGQTR+VHIYR
Sbjct: 1162 ADTVIFYDSDWNPAMDQQAQDRCHRIGQTREVHIYR 1197
>WB|WBGene00007027 [details] [associations]
symbol:ssl-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0009792 "embryo
development ending in birth or egg hatching" evidence=IMP]
[GO:0000003 "reproduction" evidence=IMP] [GO:0040011 "locomotion"
evidence=IMP] [GO:0040010 "positive regulation of growth rate"
evidence=IMP] [GO:0040007 "growth" evidence=IMP] [GO:0002119
"nematode larval development" evidence=IMP] [GO:0040035
"hermaphrodite genitalia development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0009792 GO:GO:0040007 GO:GO:0040010 GO:GO:0002119
GO:GO:0003677 GO:GO:0040011 GO:GO:0016568 GO:GO:0040035
GO:GO:0004386 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 PROSITE:PS51204 GeneTree:ENSGT00530000063427 KO:K11320
EMBL:AL132904 EMBL:AY551965 RefSeq:NP_001255179.1
RefSeq:NP_001255180.1 RefSeq:NP_001255181.1 RefSeq:NP_001255182.1
UniGene:Cel.203 ProteinModelPortal:Q9NEL2 SMR:Q9NEL2
MINT:MINT-3384018 PaxDb:Q9NEL2 EnsemblMetazoa:Y111B2A.22a
GeneID:190954 KEGG:cel:CELE_Y111B2A.22 UCSC:Y111B2A.22 CTD:190954
WormBase:Y111B2A.22a WormBase:Y111B2A.22b WormBase:Y111B2A.22c
WormBase:Y111B2A.22d InParanoid:Q9NEL2 OMA:HLACSES NextBio:947488
ArrayExpress:Q9NEL2 Uniprot:Q9NEL2
Length = 2395
Score = 556 (200.8 bits), Expect = 4.4e-52, P = 4.4e-52
Identities = 102/135 (75%), Positives = 119/135 (88%)
Query: 26 QFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLD 85
QFP+ RLI+YDCGKLQ+L V+LR+L HR LIFTQM++MLDVL+ FL+ HG+ Y RLD
Sbjct: 1176 QFPELRLIEYDCGKLQTLAVLLRQLYLYKHRCLIFTQMSKMLDVLQTFLSHHGYQYFRLD 1235
Query: 86 GTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQD 145
GTT V+QRQ +MERFN D ++FCFILSTRSGGVG+NLTGADTV+FYDSDWNPTMDAQAQD
Sbjct: 1236 GTTGVEQRQAMMERFNADPKVFCFILSTRSGGVGVNLTGADTVIFYDSDWNPTMDAQAQD 1295
Query: 146 RCHRIGQTRDVHIYR 160
RCHRIGQTR+V IYR
Sbjct: 1296 RCHRIGQTRNVSIYR 1310
>CGD|CAL0001763 [details] [associations]
symbol:orf19.1871 species:5476 "Candida albicans" [GO:0000812
"Swr1 complex" evidence=IEA] [GO:0005198 "structural molecule
activity" evidence=IEA] [GO:0043486 "histone exchange"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
CGD:CAL0001763 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0016568 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
EMBL:AACQ01000133 EMBL:AACQ01000132 RefSeq:XP_713128.1
RefSeq:XP_713174.1 ProteinModelPortal:Q59U81 STRING:Q59U81
PRIDE:Q59U81 GeneID:3645174 GeneID:3645220 KEGG:cal:CaO19.1871
KEGG:cal:CaO19.9427 KO:K11681 Uniprot:Q59U81
Length = 1641
Score = 531 (192.0 bits), Expect = 1.1e-49, P = 1.1e-49
Identities = 96/144 (66%), Positives = 114/144 (79%)
Query: 17 HPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNF 76
H + FPD L+QYDCGKLQ L +L++L + GHR LIFTQMT++LD+LE FLN
Sbjct: 1345 HKAQVKLSIAFPDKTLLQYDCGKLQKLATLLQELTSQGHRALIFTQMTKVLDILEQFLNI 1404
Query: 77 HGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWN 136
HG+ Y+RLDG TK++ RQ+L E+FN D +I FILSTRSGG+GINLTGADTV+FYDSDWN
Sbjct: 1405 HGYRYMRLDGATKIEDRQLLTEKFNRDPKIPVFILSTRSGGLGINLTGADTVIFYDSDWN 1464
Query: 137 PTMDAQAQDRCHRIGQTRDVHIYR 160
P MD Q QDRCHRIGQ RDVHIYR
Sbjct: 1465 PAMDKQCQDRCHRIGQVRDVHIYR 1488
>UNIPROTKB|E1C188 [details] [associations]
symbol:Gga.53842 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 EMBL:AADN02034826 IPI:IPI00592312
Ensembl:ENSGALT00000003680 ArrayExpress:E1C188 Uniprot:E1C188
Length = 3044
Score = 433 (157.5 bits), Expect = 7.1e-39, P = 7.1e-39
Identities = 85/150 (56%), Positives = 107/150 (71%)
Query: 11 PKLRLLHPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVL 70
P L L +T+ QFPD RL+QYD GKL++L V+L KLK+ G RVLI +QM MLD+L
Sbjct: 1795 PHLHQLRRITTPQLLQFPDLRLVQYDSGKLEALAVLLLKLKSEGRRVLILSQMILMLDIL 1854
Query: 71 EAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVF 130
E FLNFH ++R+D +QRQ LM+ FN D RIFC ILS+ S G+NL ADTVVF
Sbjct: 1855 ELFLNFHFLTFVRIDEYANHEQRQELMKSFNRDKRIFCAILSSHSRSTGVNLVEADTVVF 1914
Query: 131 YDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
YD+D NP MDA+AQ+ C RIG+ +D+HIYR
Sbjct: 1915 YDNDLNPVMDAKAQEWCDRIGRCKDIHIYR 1944
>UNIPROTKB|E1C186 [details] [associations]
symbol:Gga.53842 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0016607 GO:GO:0003682
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:MQKQKLQ EMBL:AADN02034826
IPI:IPI00587546 Ensembl:ENSGALT00000003682 ArrayExpress:E1C186
Uniprot:E1C186
Length = 3118
Score = 433 (157.5 bits), Expect = 7.3e-39, P = 7.3e-39
Identities = 85/150 (56%), Positives = 107/150 (71%)
Query: 11 PKLRLLHPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVL 70
P L L +T+ QFPD RL+QYD GKL++L V+L KLK+ G RVLI +QM MLD+L
Sbjct: 1874 PHLHQLRRITTPQLLQFPDLRLVQYDSGKLEALAVLLLKLKSEGRRVLILSQMILMLDIL 1933
Query: 71 EAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVF 130
E FLNFH ++R+D +QRQ LM+ FN D RIFC ILS+ S G+NL ADTVVF
Sbjct: 1934 ELFLNFHFLTFVRIDEYANHEQRQELMKSFNRDKRIFCAILSSHSRSTGVNLVEADTVVF 1993
Query: 131 YDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
YD+D NP MDA+AQ+ C RIG+ +D+HIYR
Sbjct: 1994 YDNDLNPVMDAKAQEWCDRIGRCKDIHIYR 2023
>MGI|MGI:1276124 [details] [associations]
symbol:Ep400 "E1A binding protein p400" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IDA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0035267 "NuA4 histone acetyltransferase complex"
evidence=ISO] [GO:0043967 "histone H4 acetylation" evidence=ISO]
[GO:0043968 "histone H2A acetylation" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1276124 GO:GO:0005524 GO:GO:0003677
GO:GO:0016607 GO:GO:0003682 GO:GO:0035267 GO:GO:0043968
GO:GO:0043967 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 KO:K11320 CTD:57634 HOVERGEN:HBG051488
OMA:MQKQKLQ OrthoDB:EOG4RBQHQ ChiTaRS:EP400 EMBL:AB092694
EMBL:AB092695 EMBL:AC161348 EMBL:AK006168 EMBL:AK030095
EMBL:AK037693 EMBL:AK046892 EMBL:AK163566 EMBL:AK164049
EMBL:AK122517 EMBL:BC022153 EMBL:BC085511 IPI:IPI00229659
IPI:IPI00404291 IPI:IPI00480329 IPI:IPI00720144 IPI:IPI01008391
RefSeq:NP_083613.2 RefSeq:NP_775089.1 UniGene:Mm.270487
ProteinModelPortal:Q8CHI8 IntAct:Q8CHI8 STRING:Q8CHI8
PhosphoSite:Q8CHI8 PaxDb:Q8CHI8 PRIDE:Q8CHI8
Ensembl:ENSMUST00000041558 Ensembl:ENSMUST00000112435
Ensembl:ENSMUST00000112436 GeneID:75560 KEGG:mmu:75560
UCSC:uc008yrf.1 UCSC:uc008yrg.1 UCSC:uc008yrh.1 InParanoid:Q8CHI8
Bgee:Q8CHI8 CleanEx:MM_EP400 Genevestigator:Q8CHI8
GermOnline:ENSMUSG00000029505 Uniprot:Q8CHI8
Length = 3072
Score = 432 (157.1 bits), Expect = 9.2e-39, P = 9.2e-39
Identities = 84/150 (56%), Positives = 107/150 (71%)
Query: 11 PKLRLLHPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVL 70
P R L +T+ QFP+ RL+Q+D GKL++L ++L+KLK+ G RVLI +QM MLD+L
Sbjct: 1787 PYHRQLQQLTALRSLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLMLDIL 1846
Query: 71 EAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVF 130
E FLNFH Y+R+D +QRQ LM FN D RIFC +LST S GINL ADTVVF
Sbjct: 1847 EMFLNFHYLTYVRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRATGINLVEADTVVF 1906
Query: 131 YDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
YD+D NP MDA+AQ+ C RIG+ +D+HIYR
Sbjct: 1907 YDNDLNPVMDAKAQEWCDRIGRCKDIHIYR 1936
>UNIPROTKB|Q96L91 [details] [associations]
symbol:EP400 "E1A-binding protein p400" species:9606 "Homo
sapiens" [GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0035267
"NuA4 histone acetyltransferase complex" evidence=IDA] [GO:0043968
"histone H2A acetylation" evidence=IDA] [GO:0043967 "histone H4
acetylation" evidence=IDA] [GO:0016607 "nuclear speck"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00717 GO:GO:0005524
GO:GO:0003677 GO:GO:0016607 GO:GO:0003682 SUPFAM:SSF46689
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR017877 PROSITE:PS50090 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 KO:K11320 EMBL:AY044869 EMBL:AC137590 EMBL:AC137632
EMBL:AB040931 EMBL:AK096311 EMBL:BC037208 EMBL:BC064554
EMBL:AB058721 EMBL:U80743 IPI:IPI00064931 IPI:IPI00167535
IPI:IPI00783692 IPI:IPI00798339 IPI:IPI00878154 RefSeq:NP_056224.3
UniGene:Hs.595201 ProteinModelPortal:Q96L91 DIP:DIP-29915N
IntAct:Q96L91 MINT:MINT-1897496 STRING:Q96L91 PhosphoSite:Q96L91
DMDM:209572748 PaxDb:Q96L91 PRIDE:Q96L91 DNASU:57634
Ensembl:ENST00000330386 Ensembl:ENST00000332482
Ensembl:ENST00000333577 Ensembl:ENST00000389561
Ensembl:ENST00000389562 Ensembl:ENST00000537902
Ensembl:ENST00000541296 GeneID:57634 KEGG:hsa:57634 UCSC:uc001ujm.3
UCSC:uc001ujn.3 UCSC:uc021rgq.1 CTD:57634 GeneCards:GC12P132434
H-InvDB:HIX0021564 HGNC:HGNC:11958 HPA:HPA016704 MIM:606265
neXtProt:NX_Q96L91 PharmGKB:PA27808 HOVERGEN:HBG051488
InParanoid:Q96L91 OMA:MQKQKLQ OrthoDB:EOG4RBQHQ ChiTaRS:EP400
GenomeRNAi:57634 NextBio:64345 ArrayExpress:Q96L91 Bgee:Q96L91
CleanEx:HS_EP400 Genevestigator:Q96L91 GermOnline:ENSG00000183495
Uniprot:Q96L91
Length = 3159
Score = 429 (156.1 bits), Expect = 2.0e-38, P = 2.0e-38
Identities = 84/150 (56%), Positives = 106/150 (70%)
Query: 11 PKLRLLHPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVL 70
P + L T+ QFP+ RL+Q+D GKL++L ++L+KLK+ G RVLI +QM MLD+L
Sbjct: 1871 PYFQQLRQTTAPRLLQFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMILMLDIL 1930
Query: 71 EAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVF 130
E FLNFH Y+R+D +QRQ LM FN D RIFC ILST S GINL ADTVVF
Sbjct: 1931 EMFLNFHYLTYVRIDENASSEQRQELMRSFNRDRRIFCAILSTHSRTTGINLVEADTVVF 1990
Query: 131 YDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
YD+D NP MDA+AQ+ C RIG+ +D+HIYR
Sbjct: 1991 YDNDLNPVMDAKAQEWCDRIGRCKDIHIYR 2020
>ASPGD|ASPL0000047400 [details] [associations]
symbol:AN2285 species:162425 "Emericella nidulans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0042766 "nucleosome
mobilization" evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA]
[GO:0043486 "histone exchange" evidence=IEA] [GO:0006348 "chromatin
silencing at telomere" evidence=IEA] [GO:0006366 "transcription
from RNA polymerase II promoter" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0043618 "regulation of transcription from RNA
polymerase II promoter in response to stress" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 EMBL:BN001307 GO:GO:0006281
GO:GO:0006351 GO:GO:0016568 GO:GO:0004386 EMBL:AACD01000038
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_659889.1 ProteinModelPortal:Q5BAZ5
STRING:Q5BAZ5 EnsemblFungi:CADANIAT00008977 GeneID:2874790
KEGG:ani:AN2285.2 HOGENOM:HOG000048482 OMA:LYFQMTR
OrthoDB:EOG41G6C8 Uniprot:Q5BAZ5
Length = 1612
Score = 419 (152.6 bits), Expect = 9.2e-38, P = 9.2e-38
Identities = 77/135 (57%), Positives = 101/135 (74%)
Query: 26 QFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLD 85
+ P R D GKL LD +LR+LKAGGHRVL++ QMTRM+D++E +L + + Y RLD
Sbjct: 1309 EVPSMRRFVTDSGKLAKLDELLRELKAGGHRVLLYFQMTRMIDLMEEYLTYRNYKYCRLD 1368
Query: 86 GTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQD 145
G+TK++ R+ + F IF F+LSTR+GG+GINLT ADTV+FYDSDWNPT+D+QA D
Sbjct: 1369 GSTKLEDRRDTVADFQQRPDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTIDSQAMD 1428
Query: 146 RCHRIGQTRDVHIYR 160
R HR+GQTR V +YR
Sbjct: 1429 RAHRLGQTRQVTVYR 1443
>ZFIN|ZDB-GENE-041014-72 [details] [associations]
symbol:ino80 "INO80 homolog (S. cerevisiae)"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
ZFIN:ZDB-GENE-041014-72 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:BX897725
HOGENOM:HOG000231795 HOVERGEN:HBG057875 OMA:KVIRKFW IPI:IPI00516098
UniGene:Dr.84310 ProteinModelPortal:Q5RGG8 STRING:Q5RGG8
InParanoid:Q5RGG8 Uniprot:Q5RGG8
Length = 1582
Score = 418 (152.2 bits), Expect = 1.1e-37, P = 1.1e-37
Identities = 74/135 (54%), Positives = 104/135 (77%)
Query: 26 QFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLD 85
+ PD + D GKL +LD++L +LK+ GHRVLI++QMTRM+D+LE ++ + H Y+RLD
Sbjct: 1120 RIPDKESLITDSGKLHTLDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLD 1179
Query: 86 GTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQD 145
G++K+ +R+ ++ F IF F+LSTR+GG+GINLT ADTV+FYDSDWNPT+D QA D
Sbjct: 1180 GSSKISERRDMVADFQSRTDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMD 1239
Query: 146 RCHRIGQTRDVHIYR 160
R HR+GQT+ V +YR
Sbjct: 1240 RAHRLGQTKQVTVYR 1254
>UNIPROTKB|I3L7Y4 [details] [associations]
symbol:EP400 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
Pfam:PF00176 PROSITE:PS51194 SMART:SM00717 GO:GO:0005524
GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 EMBL:CU469318 EMBL:CU469455
Ensembl:ENSSSCT00000027939 Uniprot:I3L7Y4
Length = 2789
Score = 420 (152.9 bits), Expect = 1.5e-37, P = 1.5e-37
Identities = 82/150 (54%), Positives = 106/150 (70%)
Query: 11 PKLRLLHPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVL 70
P + L +T+ QFP+ RL+Q+D GKL++L V+L+KL++ G RVLI +QM MLD+L
Sbjct: 1784 PYAQQLQQMTALRSLQFPELRLVQFDSGKLEALAVLLQKLRSEGRRVLILSQMVLMLDIL 1843
Query: 71 EAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVF 130
E FLNFH Y+R+D +QRQ LM FN D RIFC +LST S G++L AD VVF
Sbjct: 1844 EMFLNFHYLTYIRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRTTGVSLVEADAVVF 1903
Query: 131 YDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
YD+D NP MDA+AQ+ C RIG+ RDVHIYR
Sbjct: 1904 YDNDLNPVMDAKAQEWCDRIGRRRDVHIYR 1933
>UNIPROTKB|I3LPX4 [details] [associations]
symbol:EP400 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043968 "histone H2A acetylation" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0035267
"NuA4 histone acetyltransferase complex" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0016607 GO:GO:0003682
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:MQKQKLQ EMBL:CU469318
EMBL:CU469455 Ensembl:ENSSSCT00000024610 Uniprot:I3LPX4
Length = 2865
Score = 420 (152.9 bits), Expect = 1.6e-37, P = 1.6e-37
Identities = 82/150 (54%), Positives = 106/150 (70%)
Query: 11 PKLRLLHPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVL 70
P + L +T+ QFP+ RL+Q+D GKL++L V+L+KL++ G RVLI +QM MLD+L
Sbjct: 1860 PYAQQLQQMTALRSLQFPELRLVQFDSGKLEALAVLLQKLRSEGRRVLILSQMVLMLDIL 1919
Query: 71 EAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVF 130
E FLNFH Y+R+D +QRQ LM FN D RIFC +LST S G++L AD VVF
Sbjct: 1920 EMFLNFHYLTYIRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRTTGVSLVEADAVVF 1979
Query: 131 YDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
YD+D NP MDA+AQ+ C RIG+ RDVHIYR
Sbjct: 1980 YDNDLNPVMDAKAQEWCDRIGRRRDVHIYR 2009
>UNIPROTKB|E2QWV6 [details] [associations]
symbol:EP400 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 EMBL:AAEX03014584 EMBL:AAEX03014585
EMBL:AAEX03014586 Ensembl:ENSCAFT00000010370 Uniprot:E2QWV6
Length = 3002
Score = 420 (152.9 bits), Expect = 1.7e-37, P = 1.7e-37
Identities = 81/152 (53%), Positives = 107/152 (70%)
Query: 9 LRPKLRLLHPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLD 68
+ P + L +T+ +FP+ RL+Q+D GKL++L ++L+KLK+ G RVLI +QM MLD
Sbjct: 1742 IAPYAQQLQRMTALRSLRFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLMLD 1801
Query: 69 VLEAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTV 128
+LE FLNFH Y+R+D +QRQ LM FN D RIFC ILST S G++L AD V
Sbjct: 1802 ILEMFLNFHYLTYIRIDENANSEQRQELMRSFNRDRRIFCAILSTHSRATGVSLVEADAV 1861
Query: 129 VFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
VFYD+D NP MDA+AQ+ C RIG+ +DVHIYR
Sbjct: 1862 VFYDNDLNPVMDAKAQEWCERIGRRKDVHIYR 1893
>UNIPROTKB|L7N089 [details] [associations]
symbol:EP400 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] GeneTree:ENSGT00530000063427 EMBL:AAEX03014584
Ensembl:ENSCAFT00000010365 Uniprot:L7N089
Length = 3110
Score = 420 (152.9 bits), Expect = 1.8e-37, P = 1.8e-37
Identities = 81/152 (53%), Positives = 107/152 (70%)
Query: 9 LRPKLRLLHPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLD 68
+ P + L +T+ +FP+ RL+Q+D GKL++L ++L+KLK+ G RVLI +QM MLD
Sbjct: 1851 IAPYAQQLQRMTALRSLRFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLMLD 1910
Query: 69 VLEAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTV 128
+LE FLNFH Y+R+D +QRQ LM FN D RIFC ILST S G++L AD V
Sbjct: 1911 ILEMFLNFHYLTYIRIDENANSEQRQELMRSFNRDRRIFCAILSTHSRATGVSLVEADAV 1970
Query: 129 VFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
VFYD+D NP MDA+AQ+ C RIG+ +DVHIYR
Sbjct: 1971 VFYDNDLNPVMDAKAQEWCERIGRRKDVHIYR 2002
>DICTYBASE|DDB_G0292358 [details] [associations]
symbol:ino80 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0031011 "Ino80 complex" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006366
"transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0006338 "chromatin remodeling" evidence=ISS] [GO:0006281 "DNA
repair" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
dictyBase:DDB_G0292358 GO:GO:0005524 GenomeReviews:CM000155_GR
GO:GO:0003677 GO:GO:0006281 GO:GO:0016887 GO:GO:0006338
GO:GO:0006366 GO:GO:0031011 GO:GO:0004386 EMBL:AAFI02000189
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11665 RefSeq:XP_629681.1 ProteinModelPortal:Q54DG0
STRING:Q54DG0 PRIDE:Q54DG0 EnsemblProtists:DDB0233012
GeneID:8628597 KEGG:ddi:DDB_G0292358 InParanoid:Q54DG0 OMA:MINILED
ProtClustDB:CLSZ2497087 Uniprot:Q54DG0
Length = 2129
Score = 418 (152.2 bits), Expect = 1.8e-37, P = 1.8e-37
Identities = 76/125 (60%), Positives = 100/125 (80%)
Query: 36 DCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQV 95
D GKLQ LD +L+ LK GGHRVLI++Q T+M+++LE F+ F + YLRLDG++K+D R+
Sbjct: 1765 DSGKLQVLDKLLKDLKVGGHRVLIYSQFTKMINILEDFMIFRKYKYLRLDGSSKLDDRRD 1824
Query: 96 LMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRD 155
+++ F D IF F+LSTR+ G+GINLT ADTV+FYDSDWNPT+D QAQDR HR+GQTR
Sbjct: 1825 MVDDFQSDPSIFAFLLSTRACGIGINLTSADTVIFYDSDWNPTVDEQAQDRAHRLGQTRP 1884
Query: 156 VHIYR 160
V +YR
Sbjct: 1885 VTVYR 1889
>UNIPROTKB|F1NYY9 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0005524 "ATP binding" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] [GO:0030307 "positive
regulation of cell growth" evidence=IEA] [GO:0031011 "Ino80
complex" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0043014 "alpha-tubulin binding" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0051225 "spindle
assembly" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0071479 "cellular response to ionizing radiation"
evidence=IEA] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003678 "DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 GO:GO:0005524
GO:GO:0030307 GO:GO:0051225 GO:GO:0003677 GO:GO:0045944
GO:GO:0016887 GO:GO:0006338 GO:GO:0000070 GO:GO:0031011
GO:GO:0000724 GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914
GO:GO:2000045 GO:GO:0010571 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AADN02033529 EMBL:AADN02033530 IPI:IPI00604387
Ensembl:ENSGALT00000013933 Uniprot:F1NYY9
Length = 1564
Score = 415 (151.1 bits), Expect = 2.3e-37, P = 2.3e-37
Identities = 74/135 (54%), Positives = 104/135 (77%)
Query: 26 QFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLD 85
+ PD + D GKL +LD++L +LK+ GHRVLI++QMTRM+D+LE ++ + H Y+RLD
Sbjct: 1097 RIPDKESLITDSGKLHALDLLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLD 1156
Query: 86 GTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQD 145
G++K+ +R+ ++ F IF F+LSTR+GG+GINLT ADTV+FYDSDWNPT+D QA D
Sbjct: 1157 GSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMD 1216
Query: 146 RCHRIGQTRDVHIYR 160
R HR+GQT+ V +YR
Sbjct: 1217 RAHRLGQTKQVTVYR 1231
>MGI|MGI:1915392 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10090
"Mus musculus" [GO:0000070 "mitotic sister chromatid segregation"
evidence=ISO] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=ISO] [GO:0003678
"DNA helicase activity" evidence=ISO] [GO:0003779 "actin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0005874 "microtubule" evidence=IEA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006310 "DNA recombination" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0007049 "cell
cycle" evidence=IEA] [GO:0007067 "mitosis" evidence=IEA]
[GO:0010571 "positive regulation of DNA replication involved in S
phase" evidence=ISO] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0030307 "positive regulation of cell growth" evidence=ISO]
[GO:0031011 "Ino80 complex" evidence=ISO] [GO:0032508 "DNA duplex
unwinding" evidence=ISO] [GO:0034644 "cellular response to UV"
evidence=ISO] [GO:0043014 "alpha-tubulin binding" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0051225 "spindle
assembly" evidence=ISO] [GO:0051301 "cell division" evidence=IEA]
[GO:0070914 "UV-damage excision repair" evidence=ISO] [GO:0071479
"cellular response to ionizing radiation" evidence=ISO] [GO:2000045
"regulation of G1/S transition of mitotic cell cycle" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 MGI:MGI:1915392 GO:GO:0005524
GO:GO:0005634 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0070914 GO:GO:2000045 GO:GO:0010571 EMBL:AL844862 KO:K11665
CTD:54617 GeneTree:ENSGT00680000100052 HOGENOM:HOG000231795
HOVERGEN:HBG057875 OMA:KVIRKFW OrthoDB:EOG4ZKJKF EMBL:AK040612
EMBL:AK129317 EMBL:BC059235 IPI:IPI00378561 IPI:IPI00785415
RefSeq:NP_080850.2 UniGene:Mm.330496 ProteinModelPortal:Q6ZPV2
SMR:Q6ZPV2 IntAct:Q6ZPV2 STRING:Q6ZPV2 PhosphoSite:Q6ZPV2
PaxDb:Q6ZPV2 PRIDE:Q6ZPV2 Ensembl:ENSMUST00000049920
Ensembl:ENSMUST00000110808 GeneID:68142 KEGG:mmu:68142
InParanoid:Q6ZPV2 NextBio:326516 Bgee:Q6ZPV2 Genevestigator:Q6ZPV2
GermOnline:ENSMUSG00000034154 Uniprot:Q6ZPV2
Length = 1559
Score = 411 (149.7 bits), Expect = 6.2e-37, P = 6.2e-37
Identities = 74/135 (54%), Positives = 103/135 (76%)
Query: 26 QFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLD 85
+ P + D GKL +LDV+L +LK+ GHRVLI++QMTRM+D+LE ++ + H Y+RLD
Sbjct: 1092 RIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLD 1151
Query: 86 GTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQD 145
G++K+ +R+ ++ F IF F+LSTR+GG+GINLT ADTV+FYDSDWNPT+D QA D
Sbjct: 1152 GSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMD 1211
Query: 146 RCHRIGQTRDVHIYR 160
R HR+GQT+ V +YR
Sbjct: 1212 RAHRLGQTKQVTVYR 1226
>UNIPROTKB|E1BAN8 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:DAAA02028556 EMBL:DAAA02028557 IPI:IPI00685860
RefSeq:NP_001192313.1 UniGene:Bt.55708 Ensembl:ENSBTAT00000013708
GeneID:505992 KEGG:bta:505992 NextBio:20867400 Uniprot:E1BAN8
Length = 1566
Score = 411 (149.7 bits), Expect = 6.2e-37, P = 6.2e-37
Identities = 74/135 (54%), Positives = 103/135 (76%)
Query: 26 QFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLD 85
+ P + D GKL +LDV+L +LK+ GHRVLI++QMTRM+D+LE ++ + H Y+RLD
Sbjct: 1099 RIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLD 1158
Query: 86 GTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQD 145
G++K+ +R+ ++ F IF F+LSTR+GG+GINLT ADTV+FYDSDWNPT+D QA D
Sbjct: 1159 GSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMD 1218
Query: 146 RCHRIGQTRDVHIYR 160
R HR+GQT+ V +YR
Sbjct: 1219 RAHRLGQTKQVTVYR 1233
>GENEDB_PFALCIPARUM|PF08_0048 [details] [associations]
symbol:PF08_0048 "ATP-dependent helicase,
putative" species:5833 "Plasmodium falciparum" [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0016020 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GO:GO:0008026 KO:K01509 EMBL:AL844507
RefSeq:XP_002808863.1 EnsemblProtists:PF08_0048:mRNA GeneID:2655499
KEGG:pfa:PF08_0048 EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 412 (150.1 bits), Expect = 7.4e-37, P = 7.4e-37
Identities = 77/153 (50%), Positives = 107/153 (69%)
Query: 8 ELRPKLRLLHPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRML 67
+++ R+ H FP + I GKL +L+ +L K K G++ L+FTQ +ML
Sbjct: 1738 QIKNATRVYHDAFLKQSIIFPLNKDISLGSGKLCALEKLLSKCKREGNKCLLFTQFIKML 1797
Query: 68 DVLEAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADT 127
D+LE FLN + ++RLDG+TKV+QRQ ++ +FN D IF FI STRSG +GINLT A+
Sbjct: 1798 DILEIFLNHLNYSFIRLDGSTKVEQRQKIVTKFNNDKSIFIFISSTRSGSIGINLTAANV 1857
Query: 128 VVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
V+FYD+DWNP++D QA DRCHRIGQT+DVH++R
Sbjct: 1858 VIFYDTDWNPSIDKQAMDRCHRIGQTKDVHVFR 1890
>UNIPROTKB|C0H4W3 [details] [associations]
symbol:PF08_0048 "Probable ATP-dependent helicase
PF08_0048" species:36329 "Plasmodium falciparum 3D7" [GO:0003674
"molecular_function" evidence=ND] [GO:0005575 "cellular_component"
evidence=ND] [GO:0005737 "cytoplasm" evidence=NAS] [GO:0008026
"ATP-dependent helicase activity" evidence=ISS] [GO:0016020
"membrane" evidence=NAS] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0016020
GO:GO:0006355 GO:GO:0003677 GO:GO:0006351 GO:GO:0016568
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
GO:GO:0008026 KO:K01509 EMBL:AL844507 RefSeq:XP_002808863.1
EnsemblProtists:PF08_0048:mRNA GeneID:2655499 KEGG:pfa:PF08_0048
EuPathDB:PlasmoDB:PF3D7_0820000 Uniprot:C0H4W3
Length = 2082
Score = 412 (150.1 bits), Expect = 7.4e-37, P = 7.4e-37
Identities = 77/153 (50%), Positives = 107/153 (69%)
Query: 8 ELRPKLRLLHPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRML 67
+++ R+ H FP + I GKL +L+ +L K K G++ L+FTQ +ML
Sbjct: 1738 QIKNATRVYHDAFLKQSIIFPLNKDISLGSGKLCALEKLLSKCKREGNKCLLFTQFIKML 1797
Query: 68 DVLEAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADT 127
D+LE FLN + ++RLDG+TKV+QRQ ++ +FN D IF FI STRSG +GINLT A+
Sbjct: 1798 DILEIFLNHLNYSFIRLDGSTKVEQRQKIVTKFNNDKSIFIFISSTRSGSIGINLTAANV 1857
Query: 128 VVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
V+FYD+DWNP++D QA DRCHRIGQT+DVH++R
Sbjct: 1858 VIFYDTDWNPSIDKQAMDRCHRIGQTKDVHVFR 1890
>RGD|1310969 [details] [associations]
symbol:Ino80 "INO80 homolog (S. cerevisiae)" species:10116
"Rattus norvegicus" [GO:0000070 "mitotic sister chromatid
segregation" evidence=ISO] [GO:0000724 "double-strand break repair
via homologous recombination" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IEA;ISO] [GO:0003678 "DNA helicase activity"
evidence=ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006302 "double-strand break repair" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0010571 "positive
regulation of DNA replication involved in S phase" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0030307 "positive
regulation of cell growth" evidence=ISO] [GO:0031011 "Ino80
complex" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0034644 "cellular response to UV" evidence=ISO]
[GO:0043014 "alpha-tubulin binding" evidence=ISO] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO] [GO:0051225 "spindle assembly"
evidence=ISO] [GO:0070914 "UV-damage excision repair" evidence=ISO]
[GO:0071479 "cellular response to ionizing radiation" evidence=ISO]
[GO:2000045 "regulation of G1/S transition of mitotic cell cycle"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 RGD:1310969
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GeneTree:ENSGT00680000100052
IPI:IPI00569811 Ensembl:ENSRNOT00000031672 UCSC:RGD:1310969
Uniprot:D4A6Q6
Length = 1553
Score = 410 (149.4 bits), Expect = 7.9e-37, P = 7.9e-37
Identities = 73/135 (54%), Positives = 103/135 (76%)
Query: 26 QFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLD 85
+ P + D GKL +LD++L +LK+ GHRVLI++QMTRM+D+LE ++ + H Y+RLD
Sbjct: 1086 RIPGKESLITDSGKLYALDILLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLD 1145
Query: 86 GTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQD 145
G++K+ +R+ ++ F IF F+LSTR+GG+GINLT ADTV+FYDSDWNPT+D QA D
Sbjct: 1146 GSSKISERRDMVADFQTRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMD 1205
Query: 146 RCHRIGQTRDVHIYR 160
R HR+GQT+ V +YR
Sbjct: 1206 RAHRLGQTKQVTVYR 1220
>UNIPROTKB|Q9ULG1 [details] [associations]
symbol:INO80 "DNA helicase INO80" species:9606 "Homo
sapiens" [GO:0003779 "actin binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005874 "microtubule" evidence=IEA]
[GO:0051301 "cell division" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IDA] [GO:0003677 "DNA binding" evidence=IDA]
[GO:0016887 "ATPase activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0034644 "cellular
response to UV" evidence=IMP] [GO:0000724 "double-strand break
repair via homologous recombination" evidence=IMP] [GO:0070914
"UV-damage excision repair" evidence=IMP] [GO:0071479 "cellular
response to ionizing radiation" evidence=IMP] [GO:0006302
"double-strand break repair" evidence=IMP] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0030307 "positive regulation of cell growth"
evidence=IMP] [GO:2000045 "regulation of G1/S transition of mitotic
cell cycle" evidence=IMP] [GO:0010571 "positive regulation of DNA
replication involved in S phase" evidence=IMP] [GO:0043014
"alpha-tubulin binding" evidence=IMP] [GO:0051225 "spindle
assembly" evidence=IMP] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006200 "ATP catabolic process" evidence=IDA]
[GO:0032508 "DNA duplex unwinding" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
GO:GO:0005524 GO:GO:0030307 GO:GO:0051301 GO:GO:0051225
GO:GO:0003677 GO:GO:0045944 GO:GO:0016887 GO:GO:0006338
GO:GO:0000070 GO:GO:0031011 GO:GO:0000724 GO:GO:0034644
GO:GO:0005874 GO:GO:0071479 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043014
GO:GO:0003678 GO:GO:0070914 GO:GO:2000045 EMBL:CH471125
GO:GO:0010571 KO:K11665 CTD:54617 ChiTaRS:INO80 EMBL:AB033085
EMBL:BC146785 EMBL:AL137280 IPI:IPI00008091 PIR:T46350
RefSeq:NP_060023.1 UniGene:Hs.292949 ProteinModelPortal:Q9ULG1
SMR:Q9ULG1 DIP:DIP-34296N IntAct:Q9ULG1 STRING:Q9ULG1
PhosphoSite:Q9ULG1 DMDM:114149322 PaxDb:Q9ULG1 PRIDE:Q9ULG1
Ensembl:ENST00000361937 Ensembl:ENST00000401393 GeneID:54617
KEGG:hsa:54617 UCSC:uc001zni.3 GeneCards:GC15M041271
HGNC:HGNC:26956 MIM:610169 neXtProt:NX_Q9ULG1 PharmGKB:PA162392040
HOGENOM:HOG000231795 HOVERGEN:HBG057875 InParanoid:Q9ULG1
OMA:KVIRKFW OrthoDB:EOG4ZKJKF GenomeRNAi:54617 NextBio:57137
ArrayExpress:Q9ULG1 Bgee:Q9ULG1 CleanEx:HS_INO80
Genevestigator:Q9ULG1 GermOnline:ENSG00000128908 Uniprot:Q9ULG1
Length = 1556
Score = 410 (149.4 bits), Expect = 7.9e-37, P = 7.9e-37
Identities = 74/135 (54%), Positives = 103/135 (76%)
Query: 26 QFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLD 85
+ P + D GKL +LDV+L +LK+ GHRVLI++QMTRM+D+LE ++ + H Y+RLD
Sbjct: 1089 RIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLD 1148
Query: 86 GTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQD 145
G++K+ +R+ ++ F IF F+LSTR+GG+GINLT ADTV+FYDSDWNPT+D QA D
Sbjct: 1149 GSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMD 1208
Query: 146 RCHRIGQTRDVHIYR 160
R HR+GQT+ V +YR
Sbjct: 1209 RAHRLGQTKQVTVYR 1223
>UNIPROTKB|F1PKX5 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:2000045 "regulation of G1/S transition of
mitotic cell cycle" evidence=IEA] [GO:0071479 "cellular response to
ionizing radiation" evidence=IEA] [GO:0070914 "UV-damage excision
repair" evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:AAEX03016071 RefSeq:XP_849183.1
Ensembl:ENSCAFT00000015097 GeneID:478262 KEGG:cfa:478262
Uniprot:F1PKX5
Length = 1560
Score = 410 (149.4 bits), Expect = 7.9e-37, P = 7.9e-37
Identities = 74/135 (54%), Positives = 103/135 (76%)
Query: 26 QFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLD 85
+ P + D GKL +LDV+L +LK+ GHRVLI++QMTRM+D+LE ++ + H Y+RLD
Sbjct: 1093 RIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLD 1152
Query: 86 GTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQD 145
G++K+ +R+ ++ F IF F+LSTR+GG+GINLT ADTV+FYDSDWNPT+D QA D
Sbjct: 1153 GSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMD 1212
Query: 146 RCHRIGQTRDVHIYR 160
R HR+GQT+ V +YR
Sbjct: 1213 RAHRLGQTKQVTVYR 1227
>UNIPROTKB|F1SSV0 [details] [associations]
symbol:INO80 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:2000045 "regulation of G1/S transition of mitotic cell
cycle" evidence=IEA] [GO:0071479 "cellular response to ionizing
radiation" evidence=IEA] [GO:0070914 "UV-damage excision repair"
evidence=IEA] [GO:0051225 "spindle assembly" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0043014 "alpha-tubulin
binding" evidence=IEA] [GO:0034644 "cellular response to UV"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IEA] [GO:0030307
"positive regulation of cell growth" evidence=IEA] [GO:0016887
"ATPase activity" evidence=IEA] [GO:0010571 "positive regulation of
DNA replication involved in S phase" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0003678 "DNA helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000724 "double-strand break repair via homologous
recombination" evidence=IEA] [GO:0000070 "mitotic sister chromatid
segregation" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 GO:GO:0005524 GO:GO:0030307
GO:GO:0051225 GO:GO:0003677 GO:GO:0045944 GO:GO:0016887
GO:GO:0006338 GO:GO:0000070 GO:GO:0031011 GO:GO:0000724
GO:GO:0034644 GO:GO:0071479 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0070914 GO:GO:2000045
GO:GO:0010571 KO:K11665 CTD:54617 GeneTree:ENSGT00680000100052
OMA:KVIRKFW EMBL:FP015925 RefSeq:XP_003121636.1 UniGene:Ssc.45003
Ensembl:ENSSSCT00000005252 GeneID:100517567 KEGG:ssc:100517567
Uniprot:F1SSV0
Length = 1566
Score = 410 (149.4 bits), Expect = 8.0e-37, P = 8.0e-37
Identities = 74/135 (54%), Positives = 103/135 (76%)
Query: 26 QFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLD 85
+ P + D GKL +LDV+L +LK+ GHRVLI++QMTRM+D+LE ++ + H Y+RLD
Sbjct: 1099 RIPGKESLITDSGKLYALDVLLTRLKSQGHRVLIYSQMTRMIDLLEEYMVYRKHTYMRLD 1158
Query: 86 GTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQD 145
G++K+ +R+ ++ F IF F+LSTR+GG+GINLT ADTV+FYDSDWNPT+D QA D
Sbjct: 1159 GSSKISERRDMVADFQNRNDIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMD 1218
Query: 146 RCHRIGQTRDVHIYR 160
R HR+GQT+ V +YR
Sbjct: 1219 RAHRLGQTKQVTVYR 1233
>UNIPROTKB|F1MLB1 [details] [associations]
symbol:F1MLB1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043968 "histone H2A acetylation" evidence=IEA]
[GO:0043967 "histone H4 acetylation" evidence=IEA] [GO:0035267
"NuA4 histone acetyltransferase complex" evidence=IEA] [GO:0016607
"nuclear speck" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 PROSITE:PS51194 SMART:SM00717
GO:GO:0005524 GO:GO:0003677 GO:GO:0016607 GO:GO:0003682
GO:GO:0035267 GO:GO:0043968 GO:GO:0043967 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GeneTree:ENSGT00530000063427 OMA:MQKQKLQ EMBL:DAAA02044957
EMBL:DAAA02044956 IPI:IPI01018591 Ensembl:ENSBTAT00000027216
Uniprot:F1MLB1
Length = 3137
Score = 413 (150.4 bits), Expect = 9.8e-37, P = 9.8e-37
Identities = 80/150 (53%), Positives = 105/150 (70%)
Query: 11 PKLRLLHPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVL 70
P + L +T+ +FP+ RL+Q+D GKL++L ++L+KLK+ G RVLI +QM MLD+L
Sbjct: 1870 PYAQQLQRMTALHSLRFPELRLVQFDSGKLEALAILLQKLKSEGRRVLILSQMVLMLDIL 1929
Query: 71 EAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVF 130
E FLNFH Y+R+D +QRQ LM FN D RIFC +LST S G++L AD VVF
Sbjct: 1930 EMFLNFHYLTYIRIDENANSEQRQELMRSFNRDRRIFCALLSTHSRATGVSLVEADAVVF 1989
Query: 131 YDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
YD D NP MDA+AQ+ C RIG+ +DVHIYR
Sbjct: 1990 YDHDLNPVMDAKAQEWCDRIGRRKDVHIYR 2019
>FB|FBgn0086613 [details] [associations]
symbol:Ino80 "Ino80" species:7227 "Drosophila melanogaster"
[GO:0004386 "helicase activity" evidence=ISS] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
[GO:0031011 "Ino80 complex" evidence=IDA] [GO:0005700 "polytene
chromosome" evidence=IDA] [GO:0000975 "regulatory region DNA
binding" evidence=IDA] [GO:0010468 "regulation of gene expression"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 EMBL:AE014297 GO:GO:0005524
GO:GO:0006355 GO:GO:0006281 GO:GO:0006351 GO:GO:0016887
GO:GO:0006338 GO:GO:0031011 GO:GO:0006310 GO:GO:0005700
GO:GO:0010468 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0003678 GO:GO:0000975 KO:K11665
EMBL:AY069786 RefSeq:NP_732413.1 UniGene:Dm.33518
ProteinModelPortal:Q9VDY1 SMR:Q9VDY1 IntAct:Q9VDY1 STRING:Q9VDY1
PaxDb:Q9VDY1 EnsemblMetazoa:FBtr0083771 GeneID:42314
KEGG:dme:Dmel_CG31212 UCSC:CG31212-RA CTD:54617 FlyBase:FBgn0086613
GeneTree:ENSGT00680000100052 InParanoid:Q9VDY1 OMA:NTMAEVR
OrthoDB:EOG4SQVBH PhylomeDB:Q9VDY1 ChiTaRS:INO80 GenomeRNAi:42314
NextBio:828189 Bgee:Q9VDY1 Uniprot:Q9VDY1
Length = 1638
Score = 405 (147.6 bits), Expect = 2.9e-36, P = 2.9e-36
Identities = 75/133 (56%), Positives = 100/133 (75%)
Query: 28 PDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGT 87
PD + D GKL LD +L +LKA GHRVLI++QMT+M+D+LE ++ H Y+RLDG+
Sbjct: 1146 PDKETLITDAGKLFVLDNLLTRLKANGHRVLIYSQMTKMIDLLEEYMWHRKHRYMRLDGS 1205
Query: 88 TKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRC 147
+K+ R+ ++ F A IF F+LSTR+GG+GINLT ADTV+FYDSDWNPT+D QA DR
Sbjct: 1206 SKISARRDMVADFQTRADIFVFLLSTRAGGLGINLTAADTVIFYDSDWNPTVDQQAMDRA 1265
Query: 148 HRIGQTRDVHIYR 160
HR+GQT+ V +YR
Sbjct: 1266 HRLGQTKQVTVYR 1278
>TAIR|locus:2150270 [details] [associations]
symbol:CHR23 "chromatin remodeling 23" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0004386 "helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP
binding" evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM]
[GO:0006259 "DNA metabolic process" evidence=RCA] [GO:0007062
"sister chromatid cohesion" evidence=RCA] [GO:0007126 "meiosis"
evidence=RCA] [GO:0009640 "photomorphogenesis" evidence=RCA]
[GO:0010388 "cullin deneddylation" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0016571 "histone
methylation" evidence=RCA] [GO:0016579 "protein deubiquitination"
evidence=RCA] [GO:0031048 "chromatin silencing by small RNA"
evidence=RCA] [GO:0033044 "regulation of chromosome organization"
evidence=RCA] [GO:0045132 "meiotic chromosome segregation"
evidence=RCA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 EMBL:CP002688 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K11647
OMA:WAPSISA IPI:IPI00536400 RefSeq:NP_197432.2 UniGene:At.43995
ProteinModelPortal:F4K128 SMR:F4K128 PRIDE:F4K128
EnsemblPlants:AT5G19310.1 GeneID:832051 KEGG:ath:AT5G19310
PhylomeDB:F4K128 Uniprot:F4K128
Length = 1064
Score = 392 (143.0 bits), Expect = 3.4e-35, P = 3.4e-35
Identities = 71/138 (51%), Positives = 106/138 (76%)
Query: 23 MCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYL 82
MC + P +++ GK + LD +L KLK GHR+L+F+QMTR++D+LE +L+ + ++YL
Sbjct: 684 MCKK---PEIVRAS-GKFELLDRLLPKLKKAGHRILLFSQMTRLIDLLEIYLSLNDYMYL 739
Query: 83 RLDGTTKVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDA 141
RLDG+TK DQR +L+++FN D+ F F+LSTR+GG+G+NL ADT++ +DSDWNP MD
Sbjct: 740 RLDGSTKTDQRGILLKQFNEPDSPYFMFLLSTRAGGLGLNLQTADTIIIFDSDWNPQMDQ 799
Query: 142 QAQDRCHRIGQTRDVHIY 159
QA+DR HRIGQ ++V ++
Sbjct: 800 QAEDRAHRIGQKKEVRVF 817
>POMBASE|SPAC29B12.01 [details] [associations]
symbol:ino80 "SNF2 family helicase Ino80" species:4896
"Schizosaccharomyces pombe" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=ISO] [GO:0006338 "chromatin remodeling" evidence=IPI]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0031011 "Ino80 complex" evidence=IDA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF13892 PROSITE:PS51194
PROSITE:PS51413 SMART:SM00490 PomBase:SPAC29B12.01 GO:GO:0005524
EMBL:CU329670 GO:GO:0006355 GenomeReviews:CU329670_GR GO:GO:0003677
GO:GO:0006281 GO:GO:0006351 GO:GO:0016568 GO:GO:0031011 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043140 KO:K11665 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
RefSeq:NP_001018299.1 ProteinModelPortal:O14148 STRING:O14148
EnsemblFungi:SPAC29B12.01.1 GeneID:3361566 KEGG:spo:SPAC29B12.01
OMA:INDHNSA NextBio:20811604 Uniprot:O14148
Length = 1604
Score = 394 (143.8 bits), Expect = 4.2e-35, P = 4.2e-35
Identities = 72/133 (54%), Positives = 101/133 (75%)
Query: 30 PRLIQY--DCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGT 87
P ++++ D GKL LD +L +LKA HRVLI+ QMTRM+D++E +L F + YLRLDG+
Sbjct: 1419 PSMLRFIADSGKLSKLDKLLVELKANDHRVLIYFQMTRMIDLMEEYLTFRQYKYLRLDGS 1478
Query: 88 TKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRC 147
+K+ QR+ ++ + +F F+LSTR+GG+GINLT ADTV+FYDSDWNP++D+QA DR
Sbjct: 1479 SKISQRRDMVTEWQTRPELFVFLLSTRAGGLGINLTAADTVIFYDSDWNPSIDSQAMDRA 1538
Query: 148 HRIGQTRDVHIYR 160
HRIGQ + V +YR
Sbjct: 1539 HRIGQQKQVTVYR 1551
>CGD|CAL0000831 [details] [associations]
symbol:orf19.1734 species:5476 "Candida albicans" [GO:0031011
"Ino80 complex" evidence=IEA] [GO:0042766 "nucleosome mobilization"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0043486
"histone exchange" evidence=IEA] [GO:0006348 "chromatin silencing
at telomere" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IEA] [GO:0043140
"ATP-dependent 3'-5' DNA helicase activity" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF13892 PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490
CGD:CAL0000831 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006281 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 EMBL:AACQ01000298 EMBL:AACQ01000297
RefSeq:XP_710247.1 RefSeq:XP_710254.1 STRING:Q59KI4 GeneID:3648140
GeneID:3648148 KEGG:cal:CaO19.1734 KEGG:cal:CaO19.9302 KO:K11665
Uniprot:Q59KI4
Length = 1387
Score = 392 (143.0 bits), Expect = 5.5e-35, P = 5.5e-35
Identities = 74/161 (45%), Positives = 108/161 (67%)
Query: 1 MEAAMTAELRPKLRLLH-PVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLI 59
M+ + E PK +L P+ + P + GKL LD +L LK GGHR+LI
Sbjct: 1198 MKDQIPLEQYPKSNMLPMPIFDYSNIRMPSMDRFIAESGKLAKLDELLIDLKRGGHRILI 1257
Query: 60 FTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVG 119
+ QMTRM+ + E +L + + Y+RLDG+T ++ R+ +++ + + IF F+LSTR+GG+G
Sbjct: 1258 YFQMTRMMQIFEEYLAYKSYKYIRLDGSTTIESRREMVQAWQTNPEIFIFMLSTRAGGLG 1317
Query: 120 INLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
+NLT ADTV+FYDSDWNPT+D+QA DR HRIGQT+ V ++R
Sbjct: 1318 LNLTSADTVIFYDSDWNPTIDSQAMDRAHRIGQTKQVKVFR 1358
>SGD|S000003118 [details] [associations]
symbol:INO80 "ATPase and nucleosome spacing factor"
species:4932 "Saccharomyces cerevisiae" [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0006974 "response to DNA damage
stimulus" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA;IMP;IDA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0042766 "nucleosome mobilization" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0043486 "histone exchange"
evidence=IDA] [GO:0043140 "ATP-dependent 3'-5' DNA helicase
activity" evidence=IDA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IDA] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IMP;IDA] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0043618 "regulation of transcription from RNA polymerase II
promoter in response to stress" evidence=IMP] [GO:0016584
"nucleosome positioning" evidence=IDA] [GO:0031011 "Ino80 complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 PROSITE:PS51413 SMART:SM00490 SGD:S000003118
GO:GO:0005524 EMBL:BK006941 GO:GO:0003677 GO:GO:0006281
GO:GO:0045944 GO:GO:0016887 GO:GO:0006366 GO:GO:0031011
GO:GO:0006348 GO:GO:0004386 GO:GO:0043486 GO:GO:0042766 EMBL:Z48618
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
EMBL:X99960 GO:GO:0016584 GO:GO:0043618 KO:K11665
GeneTree:ENSGT00680000100052 HOGENOM:HOG000048482 OrthoDB:EOG41G6C8
EMBL:Z72672 PIR:S60416 RefSeq:NP_011365.1 ProteinModelPortal:P53115
SMR:P53115 DIP:DIP-1386N IntAct:P53115 MINT:MINT-388693
STRING:P53115 PaxDb:P53115 PeptideAtlas:P53115 EnsemblFungi:YGL150C
GeneID:852728 KEGG:sce:YGL150C CYGD:YGL150c OMA:DEFSDWF
NextBio:972117 Genevestigator:P53115 GermOnline:YGL150C
Uniprot:P53115
Length = 1489
Score = 391 (142.7 bits), Expect = 7.8e-35, P = 7.8e-35
Identities = 74/153 (48%), Positives = 109/153 (71%)
Query: 11 PKLRLL-HPVTSAMCTQFPDPRLIQY--DCGKLQSLDVILRKLKAGGHRVLIFTQMTRML 67
PK L P+ + P + ++ + KL+ LD +L KLK+ GHRVLI+ QMT+M+
Sbjct: 1269 PKTGLFPEPLNKNFSSNISMPSMDRFITESAKLRKLDELLVKLKSEGHRVLIYFQMTKMM 1328
Query: 68 DVLEAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADT 127
D++E +L + + ++RLDG++K++ R+ L+ + + IF F+LSTR+GG+GINLT ADT
Sbjct: 1329 DLMEEYLTYRQYNHIRLDGSSKLEDRRDLVHDWQTNPEIFVFLLSTRAGGLGINLTAADT 1388
Query: 128 VVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
V+FYDSDWNPT+D+QA DR HR+GQTR V +YR
Sbjct: 1389 VIFYDSDWNPTIDSQAMDRAHRLGQTRQVTVYR 1421
>UNIPROTKB|E2QW28 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 OMA:ETFYTAI
GeneTree:ENSGT00550000075106 EMBL:AAEX03015428
Ensembl:ENSCAFT00000012889 Uniprot:E2QW28
Length = 839
Score = 376 (137.4 bits), Expect = 1.0e-33, P = 1.0e-33
Identities = 72/132 (54%), Positives = 94/132 (71%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D L+ + GK LD +L +LKA GH+VL+F+QMTRMLD+L + +F + RLDG+
Sbjct: 592 DEELVT-NSGKFLILDRMLPELKARGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSM 650
Query: 89 KVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCH 148
+R+ M FN D +F F++STR+GG+GINLT ADTV+ YDSDWNP D QAQDRCH
Sbjct: 651 SYSEREKNMHSFNTDPDVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCH 710
Query: 149 RIGQTRDVHIYR 160
RIGQT+ V +YR
Sbjct: 711 RIGQTKPVVVYR 722
>WB|WBGene00004204 [details] [associations]
symbol:swsn-4 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016817
"hydrolase activity, acting on acid anhydrides" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] [GO:0040010 "positive
regulation of growth rate" evidence=IMP] [GO:0000003 "reproduction"
evidence=IMP] [GO:0040035 "hermaphrodite genitalia development"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0009792 GO:GO:0040010 GO:GO:0006355
GO:GO:0003677 GO:GO:0040035 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 OMA:QKKYTIS InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:Z68751 EMBL:Z68341 EMBL:AF230280 PIR:T20488
RefSeq:NP_502082.1 UniGene:Cel.23435 ProteinModelPortal:G5EF53
SMR:G5EF53 EnsemblMetazoa:F01G4.1 GeneID:178015
KEGG:cel:CELE_F01G4.1 CTD:178015 WormBase:F01G4.1 NextBio:899366
Uniprot:G5EF53
Length = 1474
Score = 377 (137.8 bits), Expect = 2.4e-33, P = 2.4e-33
Identities = 72/124 (58%), Positives = 95/124 (76%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL+ LD IL KLKA GHR+L+F QMT M+++ E FLNF + YLRLDG+TK D+R L+
Sbjct: 850 GKLELLDRILPKLKATGHRILMFFQMTSMMNIFEDFLNFRRYTYLRLDGSTKPDERGDLL 909
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+FN ++ +F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ ++V
Sbjct: 910 TQFNAPNSDLFLFMLSTRAGGLGLNLQTADTVIIFDSDWNPHQDMQAQDRAHRIGQKKEV 969
Query: 157 HIYR 160
+ R
Sbjct: 970 RVLR 973
>ASPGD|ASPL0000042729 [details] [associations]
symbol:AN2278 species:162425 "Emericella nidulans"
[GO:0006366 "transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194
SMART:SM00297 SMART:SM00490 SMART:SM00951 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 EMBL:BN001307
GO:GO:0004386 EMBL:AACD01000038 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R RefSeq:XP_659882.1
ProteinModelPortal:Q5BB02 STRING:Q5BB02
EnsemblFungi:CADANIAT00008970 GeneID:2875521 KEGG:ani:AN2278.2
OMA:GSDHSSP Uniprot:Q5BB02
Length = 1407
Score = 376 (137.4 bits), Expect = 2.8e-33, P = 2.8e-33
Identities = 74/130 (56%), Positives = 93/130 (71%)
Query: 32 LIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVD 91
LI GK + LD IL K KA GHRVL+F QMT++++++E FL G YLRLDG+TK D
Sbjct: 850 LIWRTAGKFELLDRILPKFKATGHRVLMFFQMTQIMNIMEDFLRLRGMKYLRLDGSTKSD 909
Query: 92 QRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRI 150
R L++ FN D+ FCF+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRI
Sbjct: 910 DRSDLLKLFNAPDSEYFCFLLSTRAGGLGLNLQTADTVIIFDSDWNPHQDLQAQDRAHRI 969
Query: 151 GQTRDVHIYR 160
GQ +V I R
Sbjct: 970 GQKNEVRILR 979
>DICTYBASE|DDB_G0271052 [details] [associations]
symbol:snf2b "SNF2-related protein Snf2a"
species:44689 "Dictyostelium discoideum" [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0005654 "nucleoplasm" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00951 dictyBase:DDB_G0271052 GO:GO:0005524 GO:GO:0005654
EMBL:AAFI02000005 GO:GO:0003677 GO:GO:0006357 GO:GO:0004386
InterPro:IPR011050 SUPFAM:SSF51126 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF47370
KO:K11647 InterPro:IPR014012 PROSITE:PS51204 RefSeq:XP_646649.1
ProteinModelPortal:Q55C32 EnsemblProtists:DDB0220695 GeneID:8617621
KEGG:ddi:DDB_G0271052 InParanoid:Q55C32 OMA:NINDNPN Uniprot:Q55C32
Length = 3247
Score = 380 (138.8 bits), Expect = 3.3e-33, P = 3.3e-33
Identities = 74/133 (55%), Positives = 98/133 (73%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D LI+Y GK LD +L KLKA GHRVLIF+QMT+++++LE F + + +LRLDG+T
Sbjct: 2018 DDNLIRY-AGKFDLLDRLLPKLKAAGHRVLIFSQMTQLINILEVFFAYKDYKFLRLDGST 2076
Query: 89 KVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRC 147
K D+R L+E FN ++ F F+LSTR+GG+G+NL ADTV+ +DSDWNP MD QAQDR
Sbjct: 2077 KSDERGHLLELFNAPNSEYFIFVLSTRAGGLGLNLQTADTVIIFDSDWNPQMDLQAQDRA 2136
Query: 148 HRIGQTRDVHIYR 160
HRIGQ + V + R
Sbjct: 2137 HRIGQKQTVRVLR 2149
>UNIPROTKB|E1BCV0 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:DAAA02058849 EMBL:DAAA02058850
EMBL:DAAA02058851 IPI:IPI00710948 Ensembl:ENSBTAT00000007848
Uniprot:E1BCV0
Length = 816
Score = 371 (135.7 bits), Expect = 3.4e-33, P = 3.4e-33
Identities = 71/132 (53%), Positives = 93/132 (70%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D L+ + GK LD +L +LK GH+VL+F+QMTRMLD+L + +F + RLDG+
Sbjct: 569 DEELVT-NSGKFLILDRMLPELKTRGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSM 627
Query: 89 KVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCH 148
+R+ + FN D +F F++STR+GG+GINLT ADTV+ YDSDWNP D QAQDRCH
Sbjct: 628 SYSEREKNIHSFNTDPDVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCH 687
Query: 149 RIGQTRDVHIYR 160
RIGQTR V +YR
Sbjct: 688 RIGQTRPVVVYR 699
>UNIPROTKB|F1SC64 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0046651 "lymphocyte proliferation" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IEA] [GO:0010216 "maintenance of DNA methylation"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0005721 "centromeric heterochromatin"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001655 "urogenital system
development" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216
OMA:ETFYTAI GO:GO:0006346 GO:GO:0046651
GeneTree:ENSGT00550000075106 EMBL:CU468514
Ensembl:ENSSSCT00000011474 Uniprot:F1SC64
Length = 838
Score = 370 (135.3 bits), Expect = 4.6e-33, P = 4.6e-33
Identities = 71/132 (53%), Positives = 93/132 (70%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D L+ + GK LD +L +LK GH+VL+F+QMTRMLD+L + +F + RLDG+
Sbjct: 591 DEELVT-NSGKFLILDRMLPELKIRGHKVLLFSQMTRMLDILMDYCHFRNFNFSRLDGSM 649
Query: 89 KVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCH 148
+R+ M FN D +F F++STR+GG+GINLT ADTV+ YDSDWNP D QAQDRCH
Sbjct: 650 SYTEREKNMHSFNTDPDVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCH 709
Query: 149 RIGQTRDVHIYR 160
RIGQT+ V +YR
Sbjct: 710 RIGQTKPVVVYR 721
>UNIPROTKB|Q9NW36 [details] [associations]
symbol:HELLS "cDNA FLJ10339 fis, clone NT2RM2000740, weakly
similar to POSSIBLE GLOBAL TRANSCRIPTION ACTIVATOR SNF2L"
species:9606 "Homo sapiens" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 EMBL:AL138759 UniGene:Hs.655830
HGNC:HGNC:4861 ChiTaRS:HELLS EMBL:AK001201 IPI:IPI00012073
SMR:Q9NW36 STRING:Q9NW36 Ensembl:ENST00000371327
HOGENOM:HOG000198825 HOVERGEN:HBG072129 Uniprot:Q9NW36
Length = 310
Score = 360 (131.8 bits), Expect = 5.2e-33, P = 5.2e-33
Identities = 69/132 (52%), Positives = 91/132 (68%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D L+ + GK LD +L +LK GH+VL+F+QMT MLD+L + + + RLDG+
Sbjct: 28 DEELVT-NSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSM 86
Query: 89 KVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCH 148
+R+ M FN D +F F++STR+GG+GINLT ADTV+ YDSDWNP D QAQDRCH
Sbjct: 87 SYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCH 146
Query: 149 RIGQTRDVHIYR 160
RIGQT+ V +YR
Sbjct: 147 RIGQTKPVVVYR 158
>CGD|CAL0005444 [details] [associations]
symbol:SNF2 species:5476 "Candida albicans" [GO:0016514
"SWI/SNF complex" evidence=IPI] [GO:0009405 "pathogenesis"
evidence=IMP] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IEA] [GO:0001102 "RNA polymerase II activating
transcription factor binding" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IEA] [GO:0031492 "nucleosomal DNA
binding" evidence=IEA] [GO:0016586 "RSC complex" evidence=IEA]
[GO:0044182 "filamentous growth of a population of unicellular
organisms" evidence=IMP] [GO:1900430 "positive regulation of
filamentous growth of a population of unicellular organisms"
evidence=IMP] [GO:0036178 "filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900442 "positive regulation of filamentous growth of a
population of unicellular organisms in response to neutral pH"
evidence=IMP] [GO:0036180 "filamentous growth of a population of
unicellular organisms in response to biotic stimulus" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] [GO:0042766 "nucleosome mobilization" evidence=IEA]
[GO:0005987 "sucrose catabolic process" evidence=IEA] [GO:1900231
"regulation of single-species biofilm formation on inanimate
substrate" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0042148 "strand invasion"
evidence=IEA] [GO:0044109 "cellular alcohol catabolic process"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0031496 "positive regulation of mating type
switching" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0006261 "DNA-dependent DNA
replication" evidence=IEA] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IEA] [GO:0036244 "cellular response to
neutral pH" evidence=IMP] [GO:0071216 "cellular response to biotic
stimulus" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 371 (135.7 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 70/124 (56%), Positives = 91/124 (73%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD +L K KA GH+VLIF QMT++++++E FL F G Y+RLDG TK D R L+
Sbjct: 1102 GKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLL 1161
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN D+ FCF+LSTR+GG+G+NL ADTV+ +D+DWNP D QAQDR HRIGQ +V
Sbjct: 1162 KSFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEV 1221
Query: 157 HIYR 160
I R
Sbjct: 1222 RILR 1225
>UNIPROTKB|Q5AM49 [details] [associations]
symbol:SNF2 "Putative uncharacterized protein SNF2"
species:237561 "Candida albicans SC5314" [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009405
"pathogenesis" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=IPI] [GO:0030447 "filamentous growth" evidence=IMP]
[GO:0036178 "filamentous growth of a population of unicellular
organisms in response to neutral pH" evidence=IMP] [GO:0036180
"filamentous growth of a population of unicellular organisms in
response to biotic stimulus" evidence=IMP] [GO:0036244 "cellular
response to neutral pH" evidence=IMP] [GO:0044182 "filamentous
growth of a population of unicellular organisms" evidence=IMP]
[GO:0071216 "cellular response to biotic stimulus" evidence=IMP]
[GO:1900430 "positive regulation of filamentous growth of a
population of unicellular organisms" evidence=IMP] [GO:1900442
"positive regulation of filamentous growth of a population of
unicellular organisms in response to neutral pH" evidence=IMP]
[GO:1900445 "positive regulation of filamentous growth of a
population of unicellular organisms in response to biotic stimulus"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0005444 GO:GO:0005524 GO:GO:0071216
GO:GO:0036244 GO:GO:0036180 GO:GO:0036178 GO:GO:0009405
GO:GO:1900445 GO:GO:1900442 GO:GO:0006355 GO:GO:0003677
GO:GO:0016514 GO:GO:0004386 EMBL:AACQ01000007 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 KO:K11786
RefSeq:XP_722570.1 ProteinModelPortal:Q5AM49 MINT:MINT-2832160
STRING:Q5AM49 GeneID:3635855 KEGG:cal:CaO19.1526 Uniprot:Q5AM49
Length = 1690
Score = 371 (135.7 bits), Expect = 1.3e-32, P = 1.3e-32
Identities = 70/124 (56%), Positives = 91/124 (73%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD +L K KA GH+VLIF QMT++++++E FL F G Y+RLDG TK D R L+
Sbjct: 1102 GKFELLDKVLPKFKATGHKVLIFFQMTQIMNIMEDFLRFRGMKYMRLDGGTKADDRTDLL 1161
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN D+ FCF+LSTR+GG+G+NL ADTV+ +D+DWNP D QAQDR HRIGQ +V
Sbjct: 1162 KSFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEV 1221
Query: 157 HIYR 160
I R
Sbjct: 1222 RILR 1225
>SGD|S000005816 [details] [associations]
symbol:SNF2 "Catalytic subunit of the SWI/SNF chromatin
remodeling complex" species:4932 "Saccharomyces cerevisiae"
[GO:0006261 "DNA-dependent DNA replication" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA;IMP] [GO:0006338
"chromatin remodeling" evidence=IGI;IMP] [GO:0031496 "positive
regulation of mating type switching" evidence=IMP] [GO:0031492
"nucleosomal DNA binding" evidence=IDA] [GO:0042766 "nucleosome
mobilization" evidence=IMP;IDA] [GO:0006302 "double-strand break
repair" evidence=IMP] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IMP;IDA] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IMP;IDA]
[GO:0044109 "cellular alcohol catabolic process" evidence=IMP]
[GO:0005987 "sucrose catabolic process" evidence=IMP] [GO:0070577
"histone acetyl-lysine binding" evidence=IMP;IDA] [GO:0042148
"strand invasion" evidence=IMP] [GO:0061412 "positive regulation of
transcription from RNA polymerase II promoter in response to amino
acid starvation" evidence=IMP] [GO:0001102 "RNA polymerase II
activating transcription factor binding" evidence=IPI]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR014978 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00384 SMART:SM00490
SMART:SM00951 SGD:S000005816 GO:GO:0005524 EMBL:BK006948
GO:GO:0006351 GO:GO:0006261 GO:GO:0016514 GO:GO:0006302
GO:GO:0004386 GO:GO:0005987 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GeneTree:ENSGT00550000074659 InterPro:IPR014012
PROSITE:PS51204 EMBL:X89633 GO:GO:0008094 HOGENOM:HOG000172362
GO:GO:0031492 RefSeq:NP_014933.3 GeneID:854465 KEGG:sce:YOR290C
KO:K11786 GO:GO:0061412 GO:GO:0042148 OrthoDB:EOG4D565R EMBL:M61703
EMBL:X57837 EMBL:D90459 EMBL:Z75198 EMBL:Z75199 PIR:S15047
RefSeq:NP_014935.3 ProteinModelPortal:P22082 SMR:P22082
DIP:DIP-1150N IntAct:P22082 MINT:MINT-600461 STRING:P22082
PaxDb:P22082 PeptideAtlas:P22082 EnsemblFungi:YOR290C GeneID:854467
KEGG:sce:YOR292C CYGD:YOR290c OMA:HPNFLSK NextBio:976750
Genevestigator:P22082 GermOnline:YOR290C GO:GO:0044109
GO:GO:0031496 Uniprot:P22082
Length = 1703
Score = 370 (135.3 bits), Expect = 1.6e-32, P = 1.6e-32
Identities = 73/124 (58%), Positives = 90/124 (72%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KLKA GHRVLIF QMT+++D++E FL + YLRLDG TK D+R L+
Sbjct: 1087 GKFELLDRILPKLKATGHRVLIFFQMTQIMDIMEDFLRYINIKYLRLDGHTKSDERSELL 1146
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
FN D+ CFILSTR+GG+G+NL ADTV+ +D+DWNP D QAQDR HRIGQ +V
Sbjct: 1147 RLFNAPDSEYLCFILSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEV 1206
Query: 157 HIYR 160
I R
Sbjct: 1207 RILR 1210
>UNIPROTKB|F1P5V4 [details] [associations]
symbol:HELLS "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005721 "centromeric
heterochromatin" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0010216 "maintenance of DNA
methylation" evidence=IEA] [GO:0031508 "centromeric heterochromatin
assembly" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0046651 "lymphocyte
proliferation" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 OMA:ETFYTAI
GO:GO:0006346 GO:GO:0046651 GeneTree:ENSGT00550000075106
EMBL:AADN02027839 EMBL:AADN02027838 IPI:IPI00823178
Ensembl:ENSGALT00000008749 ArrayExpress:F1P5V4 Uniprot:F1P5V4
Length = 839
Score = 364 (133.2 bits), Expect = 2.0e-32, P = 2.0e-32
Identities = 74/145 (51%), Positives = 98/145 (67%)
Query: 17 HPVTSAMCTQFP-DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLN 75
+P+ A QF D L++ + GK LD +L +LK GH+VL+F+QMT MLD+L +
Sbjct: 579 YPLDPAT-QQFKVDEDLVK-NSGKFLLLDRMLPELKKRGHKVLMFSQMTMMLDILMDYCY 636
Query: 76 FHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDW 135
G + RLDG+ R+ M +FN D +F F++STR+GG+GINLT ADTV+ YDSDW
Sbjct: 637 LRGFKFSRLDGSMSYSDREENMHQFNNDPEVFLFLVSTRAGGLGINLTAADTVIIYDSDW 696
Query: 136 NPTMDAQAQDRCHRIGQTRDVHIYR 160
NP D QAQDRCHRIGQT+ V +YR
Sbjct: 697 NPQSDLQAQDRCHRIGQTKPVVVYR 721
>MGI|MGI:106209 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10090 "Mus
musculus" [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0000775 "chromosome, centromeric region" evidence=IDA]
[GO:0001655 "urogenital system development" evidence=IMP]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IDA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005721 "centromeric heterochromatin"
evidence=IDA] [GO:0006306 "DNA methylation" evidence=IMP]
[GO:0006342 "chromatin silencing" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IMP]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007049 "cell cycle" evidence=IEA] [GO:0007067
"mitosis" evidence=IEA] [GO:0007275 "multicellular organismal
development" evidence=IMP] [GO:0010216 "maintenance of DNA
methylation" evidence=IMP] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0030098 "lymphocyte differentiation"
evidence=TAS] [GO:0031508 "centromeric heterochromatin assembly"
evidence=IMP] [GO:0043066 "negative regulation of apoptotic
process" evidence=IMP] [GO:0051301 "cell division" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 MGI:MGI:106209 GO:GO:0005524
GO:GO:0005634 GO:GO:0043066 GO:GO:0051301 GO:GO:0007067
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 HOGENOM:HOG000172362 OMA:ETFYTAI GO:GO:0006346
GO:GO:0030098 GO:GO:0046651 CTD:3070 HOVERGEN:HBG060049
OrthoDB:EOG4SN1N4 EMBL:U25691 EMBL:AF155210 EMBL:AK013266
EMBL:AK147126 EMBL:BC020056 EMBL:BC100394 IPI:IPI00121431
IPI:IPI00808497 PIR:JC4666 RefSeq:NP_032260.2 UniGene:Mm.392920
UniGene:Mm.486446 UniGene:Mm.57223 ProteinModelPortal:Q60848
SMR:Q60848 DIP:DIP-43735N IntAct:Q60848 MINT:MINT-2521001
STRING:Q60848 PhosphoSite:Q60848 PaxDb:Q60848 PRIDE:Q60848
DNASU:15201 Ensembl:ENSMUST00000025965 GeneID:15201 KEGG:mmu:15201
UCSC:uc008hjt.1 GeneTree:ENSGT00550000075106 InParanoid:Q60848
NextBio:287739 Bgee:Q60848 CleanEx:MM_HELLS Genevestigator:Q60848
GermOnline:ENSMUSG00000025001 Uniprot:Q60848
Length = 821
Score = 361 (132.1 bits), Expect = 4.1e-32, P = 4.1e-32
Identities = 69/132 (52%), Positives = 92/132 (69%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D L+ + GK LD +L +LK GH+VL+F+QMT MLD+L + + I+ RLDG+
Sbjct: 574 DEELVT-NSGKFLILDRMLPELKKRGHKVLVFSQMTSMLDILMDYCHLRNFIFSRLDGSM 632
Query: 89 KVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCH 148
+R+ + FN D +F F++STR+GG+GINLT ADTV+ YDSDWNP D QAQDRCH
Sbjct: 633 SYSEREKNIYSFNTDPDVFLFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCH 692
Query: 149 RIGQTRDVHIYR 160
RIGQT+ V +YR
Sbjct: 693 RIGQTKPVVVYR 704
>UNIPROTKB|F1NH78 [details] [associations]
symbol:F1NH78 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:AADN02040929 EMBL:AADN02040930 IPI:IPI00571784
Ensembl:ENSGALT00000023340 ArrayExpress:F1NH78 Uniprot:F1NH78
Length = 1781
Score = 366 (133.9 bits), Expect = 4.7e-32, P = 4.7e-32
Identities = 78/150 (52%), Positives = 97/150 (64%)
Query: 16 LHPVTSAMCTQFP----DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLE 71
L PV + P D + GKL L +L+KL+ GGHRVLIF+QMT+MLD+LE
Sbjct: 930 LFPVAAVEAPVLPNGSYDGNSLVKSSGKLMLLQKMLKKLRDGGHRVLIFSQMTKMLDLLE 989
Query: 72 AFLNFHGHIYLRLDGTTKVDQRQVLMERFNMD-ARIFCFILSTRSGGVGINLTGADTVVF 130
FL + G+ Y R+DG RQ ++RFN A+ FCF+LSTR+GG+GINL ADTV+
Sbjct: 990 DFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVII 1049
Query: 131 YDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
YDSDWNP D QA R HRIGQ + V IYR
Sbjct: 1050 YDSDWNPHNDIQAFSRAHRIGQNKKVMIYR 1079
>CGD|CAL0003962 [details] [associations]
symbol:orf19.239 species:5476 "Candida albicans" [GO:0016586
"RSC complex" evidence=IEA] [GO:0007059 "chromosome segregation"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0031055 "chromatin remodeling at
centromere" evidence=IEA] [GO:0006337 "nucleosome disassembly"
evidence=IEA] [GO:0016584 "nucleosome positioning" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0006368
"transcription elongation from RNA polymerase II promoter"
evidence=IEA] [GO:0007126 "meiosis" evidence=IEA] [GO:0007010
"cytoskeleton organization" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0000086
"G2/M transition of mitotic cell cycle" evidence=IEA] [GO:0015616
"DNA translocase activity" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0070577 "histone acetyl-lysine binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 CGD:CAL0003962 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
EMBL:AACQ01000027 EMBL:AACQ01000026 InterPro:IPR014012
PROSITE:PS51204 KO:K11786 RefSeq:XP_719938.1 RefSeq:XP_720068.1
ProteinModelPortal:Q5AEM9 STRING:Q5AEM9 GeneID:3638290
GeneID:3638351 KEGG:cal:CaO19.239 KEGG:cal:CaO19.7869
Uniprot:Q5AEM9
Length = 1303
Score = 364 (133.2 bits), Expect = 4.8e-32, P = 4.8e-32
Identities = 68/124 (54%), Positives = 92/124 (74%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD +L K K GHRVL+F QMT+++D++E FL + YLRLDG+TK ++RQ ++
Sbjct: 820 GKFELLDRVLPKFKKSGHRVLMFFQMTQIMDIMEDFLRWKDMKYLRLDGSTKAEERQDML 879
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN D+ FCF+LSTR+GG+G+NL ADTV+ +D+DWNP D QAQDR HRIGQ +V
Sbjct: 880 KVFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEV 939
Query: 157 HIYR 160
I R
Sbjct: 940 RILR 943
>UNIPROTKB|Q9NRZ9 [details] [associations]
symbol:HELLS "Lymphoid-specific helicase" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0007067 "mitosis" evidence=IEA] [GO:0051301 "cell
division" evidence=IEA] [GO:0001655 "urogenital system development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005721
"centromeric heterochromatin" evidence=ISS] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISS]
[GO:0007275 "multicellular organismal development" evidence=ISS]
[GO:0010216 "maintenance of DNA methylation" evidence=ISS]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISS]
[GO:0000775 "chromosome, centromeric region" evidence=ISS]
[GO:0046651 "lymphocyte proliferation" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0007275 GO:GO:0005524
GO:GO:0005634 GO:GO:0051301 GO:GO:0007067 GO:GO:0003677
EMBL:CH471066 GO:GO:0006351 GO:GO:0003682 GO:GO:0001655
GO:GO:0004386 GO:GO:0005721 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031508
GO:GO:0010216 GO:GO:0006346 GO:GO:0046651 EMBL:AF155827
EMBL:AB102717 EMBL:AB102718 EMBL:AB102719 EMBL:AB102720
EMBL:AB102721 EMBL:AB102722 EMBL:AK314485 EMBL:AB113249
EMBL:BX538033 EMBL:AL138759 EMBL:BC015477 EMBL:BC029381
EMBL:BC030963 EMBL:BC031004 EMBL:AY007108 EMBL:AB074174
IPI:IPI00010590 IPI:IPI00807418 IPI:IPI00807455 IPI:IPI00807553
IPI:IPI00807574 IPI:IPI00807597 IPI:IPI00807667 IPI:IPI00807698
IPI:IPI00807726 RefSeq:NP_060533.2 UniGene:Hs.655830
ProteinModelPortal:Q9NRZ9 SMR:Q9NRZ9 IntAct:Q9NRZ9 STRING:Q9NRZ9
PhosphoSite:Q9NRZ9 DMDM:74761670 PaxDb:Q9NRZ9 PRIDE:Q9NRZ9
DNASU:3070 Ensembl:ENST00000348459 Ensembl:ENST00000394036
Ensembl:ENST00000394044 Ensembl:ENST00000394045 GeneID:3070
KEGG:hsa:3070 UCSC:uc001kjs.3 UCSC:uc009xul.3 UCSC:uc009xum.3
CTD:3070 GeneCards:GC10P096305 H-InvDB:HIX0017337 HGNC:HGNC:4861
HPA:CAB004491 MIM:603946 neXtProt:NX_Q9NRZ9 PharmGKB:PA35054
HOVERGEN:HBG060049 OrthoDB:EOG4SN1N4 PhylomeDB:Q9NRZ9 ChiTaRS:HELLS
GenomeRNAi:3070 NextBio:12147 ArrayExpress:Q9NRZ9 Bgee:Q9NRZ9
Genevestigator:Q9NRZ9 GermOnline:ENSG00000119969 Uniprot:Q9NRZ9
Length = 838
Score = 360 (131.8 bits), Expect = 5.5e-32, P = 5.5e-32
Identities = 69/132 (52%), Positives = 91/132 (68%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D L+ + GK LD +L +LK GH+VL+F+QMT MLD+L + + + RLDG+
Sbjct: 591 DEELVT-NSGKFLILDRMLPELKKRGHKVLLFSQMTSMLDILMDYCHLRDFNFSRLDGSM 649
Query: 89 KVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCH 148
+R+ M FN D +F F++STR+GG+GINLT ADTV+ YDSDWNP D QAQDRCH
Sbjct: 650 SYSEREKNMHSFNTDPEVFIFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCH 709
Query: 149 RIGQTRDVHIYR 160
RIGQT+ V +YR
Sbjct: 710 RIGQTKPVVVYR 721
>FB|FBgn0032157 [details] [associations]
symbol:Etl1 "Etl1 homologue" species:7227 "Drosophila
melanogaster" [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0005634 EMBL:AE014134 GO:GO:0003677
GO:GO:0006281 GO:GO:0016568 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 OMA:KEERYMA EMBL:AY060597
RefSeq:NP_001033889.1 RefSeq:NP_001033890.1 RefSeq:NP_609320.2
UniGene:Dm.3953 ProteinModelPortal:Q9VL72 SMR:Q9VL72 IntAct:Q9VL72
STRING:Q9VL72 PRIDE:Q9VL72 EnsemblMetazoa:FBtr0079901 GeneID:34311
KEGG:dme:Dmel_CG5899 UCSC:CG5899-RA FlyBase:FBgn0032157
InParanoid:Q9VL72 PhylomeDB:Q9VL72 GenomeRNAi:34311 NextBio:787873
Bgee:Q9VL72 Uniprot:Q9VL72
Length = 844
Score = 359 (131.4 bits), Expect = 7.2e-32, P = 7.2e-32
Identities = 76/135 (56%), Positives = 93/135 (68%)
Query: 26 QFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLD 85
+ PD LI D GK LD +L KLKA GHRVL+F+Q T MLD++E +L + RLD
Sbjct: 642 KIPD-NLI-CDSGKFLYLDTLLPKLKAEGHRVLLFSQFTMMLDIVEEYLRIRKFGFCRLD 699
Query: 86 GTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQD 145
G T V+ RQ L+ FN D IF F+LST++GGVGINLT ADT V +D D+NP D QA+D
Sbjct: 700 GATAVNVRQDLITDFNGDDSIFVFLLSTKAGGVGINLTAADTCVIHDIDFNPYNDKQAED 759
Query: 146 RCHRIGQTRDVHIYR 160
RCHR+GQ R V IYR
Sbjct: 760 RCHRMGQQRPVTIYR 774
>RGD|1309820 [details] [associations]
symbol:Hells "helicase, lymphoid specific" species:10116 "Rattus
norvegicus" [GO:0000775 "chromosome, centromeric region"
evidence=ISO] [GO:0001655 "urogenital system development"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO] [GO:0005721 "centromeric heterochromatin"
evidence=ISO] [GO:0006306 "DNA methylation" evidence=ISO]
[GO:0006342 "chromatin silencing" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0007275 "multicellular organismal development" evidence=ISO]
[GO:0010216 "maintenance of DNA methylation" evidence=ISO]
[GO:0031508 "centromeric heterochromatin assembly" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 RGD:1309820
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0003682
GO:GO:0001655 GO:GO:0004386 GO:GO:0005721 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0031508 GO:GO:0010216 GO:GO:0006346
GO:GO:0046651 IPI:IPI00768565 PRIDE:F1M8B3
Ensembl:ENSRNOT00000017812 OMA:XVERVEL Uniprot:F1M8B3
Length = 494
Score = 349 (127.9 bits), Expect = 7.7e-32, P = 7.7e-32
Identities = 67/132 (50%), Positives = 90/132 (68%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D L+ + GK LD +L +LK H+VL+F+QMT MLD+L + + + RLDG+
Sbjct: 247 DEELVT-NSGKFLILDRMLPELKKRCHKVLVFSQMTSMLDILMDYCHLRNFTFSRLDGSM 305
Query: 89 KVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCH 148
+R+ + FN D +F F++STR+GG+GINLT ADTV+ YDSDWNP D QAQDRCH
Sbjct: 306 SYSEREKNIYSFNTDPEVFLFLVSTRAGGLGINLTAADTVIIYDSDWNPQSDLQAQDRCH 365
Query: 149 RIGQTRDVHIYR 160
RIGQT+ V +YR
Sbjct: 366 RIGQTKPVVVYR 377
>ZFIN|ZDB-GENE-030131-5964 [details] [associations]
symbol:smarca2 "SWI/SNF related, matrix
associated, actin dependent regulator of chromatin, subfamily a,
member 2" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 ZFIN:ZDB-GENE-030131-5964 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 CTD:6595
HOVERGEN:HBG056636 EMBL:BC060676 IPI:IPI00483012 RefSeq:NP_997881.1
UniGene:Dr.93531 ProteinModelPortal:Q6P9P2 SMR:Q6P9P2 STRING:Q6P9P2
GeneID:334032 KEGG:dre:334032 InParanoid:Q6P9P2 NextBio:20810237
ArrayExpress:Q6P9P2 Uniprot:Q6P9P2
Length = 1568
Score = 363 (132.8 bits), Expect = 8.1e-32, P = 8.1e-32
Identities = 68/124 (54%), Positives = 91/124 (73%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KLKA HRVL+F QMT ++ +LE + + +YLRLDGTTK + R +L+
Sbjct: 1052 GKFELLDRILPKLKATNHRVLLFCQMTSLMTILEDYFGYRNFLYLRLDGTTKSEDRAMLL 1111
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
++FN + ++ F F+LSTR+GG+G+NL ADTVV +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1112 KKFNEEGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEV 1171
Query: 157 HIYR 160
+ R
Sbjct: 1172 RVLR 1175
>ZFIN|ZDB-GENE-030131-9923 [details] [associations]
symbol:hells "helicase, lymphoid-specific"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0045132 "meiotic chromosome segregation"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR011515 Pfam:PF00176 Pfam:PF00271
Pfam:PF07557 PROSITE:PS51194 SMART:SM00490
ZFIN:ZDB-GENE-030131-9923 GO:GO:0005524 GO:GO:0005634 GO:GO:0000775
GO:GO:0003677 GO:GO:0004386 GO:GO:0045132 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 CTD:3070 HOVERGEN:HBG060049
EMBL:AY612850 IPI:IPI00817585 RefSeq:NP_001032178.1
UniGene:Dr.75180 ProteinModelPortal:Q3BDS6 STRING:Q3BDS6
GeneID:553328 KEGG:dre:553328 InParanoid:Q3BDS6 NextBio:20880094
ArrayExpress:Q3BDS6 Uniprot:Q3BDS6
Length = 853
Score = 358 (131.1 bits), Expect = 9.4e-32, P = 9.4e-32
Identities = 69/132 (52%), Positives = 93/132 (70%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D +L++ GK LD +L +LK GH+VLIF+QMT +LD+L + G+ Y RLDG+
Sbjct: 607 DEQLVEAS-GKFLILDRMLPELKKRGHKVLIFSQMTSILDILMDYCYLRGYEYSRLDGSM 665
Query: 89 KVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCH 148
R M++F+ D +F F+LSTR+GG+GINLT ADTV+ +DSDWNP D QAQDRCH
Sbjct: 666 SYADRDENMKKFSSDPEVFLFLLSTRAGGLGINLTSADTVIIFDSDWNPQADLQAQDRCH 725
Query: 149 RIGQTRDVHIYR 160
RIGQT+ V ++R
Sbjct: 726 RIGQTKPVVVHR 737
>SGD|S000001388 [details] [associations]
symbol:STH1 "ATPase component of the RSC chromatin remodeling
complex" species:4932 "Saccharomyces cerevisiae" [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0007126 "meiosis" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA;IMP] [GO:0007049 "cell cycle"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0006337 "nucleosome
disassembly" evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IMP] [GO:0007010 "cytoskeleton organization"
evidence=IGI;IMP] [GO:0031055 "chromatin remodeling at centromere"
evidence=IMP] [GO:0007059 "chromosome segregation" evidence=IGI]
[GO:0016586 "RSC complex" evidence=IDA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IDA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000086 "G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0006368 "transcription elongation from RNA polymerase II
promoter" evidence=IDA] [GO:0006302 "double-strand break repair"
evidence=IMP] [GO:0015616 "DNA translocase activity" evidence=IDA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SGD:S000001388 GO:GO:0005524 GO:GO:0007126 GO:GO:0000086
GO:GO:0007010 GO:GO:0007059 GO:GO:0000775 GO:GO:0006355
EMBL:BK006942 GO:GO:0006302 GO:GO:0004386 GO:GO:0006368
GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0043044 GO:GO:0016584
EMBL:DQ115392 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
GO:GO:0070577 InterPro:IPR018359 EMBL:Z46833 InterPro:IPR014012
PROSITE:PS51204 GeneTree:ENSGT00670000098110 HOGENOM:HOG000172362
GO:GO:0015616 GO:GO:0031055 KO:K11786 OrthoDB:EOG4D565R EMBL:D10595
EMBL:M83755 PIR:S49883 RefSeq:NP_012140.1 ProteinModelPortal:P32597
SMR:P32597 DIP:DIP-5889N IntAct:P32597 MINT:MINT-615490
STRING:P32597 PaxDb:P32597 PeptideAtlas:P32597 EnsemblFungi:YIL126W
GeneID:854680 KEGG:sce:YIL126W CYGD:YIL126w OMA:MEDFLRM
NextBio:977286 Genevestigator:P32597 GermOnline:YIL126W
Uniprot:P32597
Length = 1359
Score = 361 (132.1 bits), Expect = 1.1e-31, P = 1.1e-31
Identities = 67/124 (54%), Positives = 90/124 (72%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD +L K KA GHRVL+F QMT+++D++E FL Y+RLDG+TK ++R ++
Sbjct: 791 GKFELLDRVLPKFKASGHRVLMFFQMTQVMDIMEDFLRMKDLKYMRLDGSTKTEERTEML 850
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
FN D+ FCF+LSTR+GG+G+NL ADTV+ +D+DWNP D QAQDR HRIGQ +V
Sbjct: 851 NAFNAPDSDYFCFLLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQKNEV 910
Query: 157 HIYR 160
I R
Sbjct: 911 RILR 914
>UNIPROTKB|F5GWX5 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AC006064
IPI:IPI00000846 HGNC:HGNC:1919 ChiTaRS:CHD4
ProteinModelPortal:F5GWX5 SMR:F5GWX5 PRIDE:F5GWX5
Ensembl:ENST00000544040 UCSC:uc001qpn.3 ArrayExpress:F5GWX5
Bgee:F5GWX5 Uniprot:F5GWX5
Length = 1905
Score = 362 (132.5 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 73/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +L+ LK GGHRVLIF+QMT+MLD+LE FL G+ Y R+DG + RQ +
Sbjct: 1043 GKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAI 1102
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HRIGQ + V
Sbjct: 1103 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKV 1162
Query: 157 HIYR 160
IYR
Sbjct: 1163 MIYR 1166
>UNIPROTKB|E2RHA0 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 EMBL:AAEX03015287 RefSeq:XP_867754.2
Ensembl:ENSCAFT00000023774 GeneID:477714 KEGG:cfa:477714
Uniprot:E2RHA0
Length = 1912
Score = 362 (132.5 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 73/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +L+ LK GGHRVLIF+QMT+MLD+LE FL G+ Y R+DG + RQ +
Sbjct: 1050 GKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAI 1109
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HRIGQ + V
Sbjct: 1110 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKV 1169
Query: 157 HIYR 160
IYR
Sbjct: 1170 MIYR 1173
>UNIPROTKB|Q14839 [details] [associations]
symbol:CHD4 "Chromodomain-helicase-DNA-binding protein 4"
species:9606 "Homo sapiens" [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IDA] [GO:0005515
"protein binding" evidence=IPI] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0005813 "centrosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=IPI] [GO:0005634 "nucleus"
evidence=IDA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0006357 GO:GO:0006351 GO:GO:0016568
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 EMBL:X86691
EMBL:AC006064 EMBL:BC038596 IPI:IPI00000846 IPI:IPI00455210
RefSeq:NP_001264.2 UniGene:Hs.162233 PDB:1MM2 PDB:1MM3 PDB:2EE1
PDB:2L5U PDB:2L75 PDBsum:1MM2 PDBsum:1MM3 PDBsum:2EE1 PDBsum:2L5U
PDBsum:2L75 ProteinModelPortal:Q14839 SMR:Q14839 DIP:DIP-31183N
IntAct:Q14839 MINT:MINT-349766 STRING:Q14839 PhosphoSite:Q14839
DMDM:311033360 PaxDb:Q14839 PRIDE:Q14839 DNASU:1108
Ensembl:ENST00000309577 Ensembl:ENST00000357008
Ensembl:ENST00000544484 GeneID:1108 KEGG:hsa:1108 UCSC:uc001qpo.3
UCSC:uc001qpp.3 CTD:1108 GeneCards:GC12M006679 H-InvDB:HIX0201859
HGNC:HGNC:1919 HPA:HPA012008 MIM:603277 neXtProt:NX_Q14839
PharmGKB:PA26455 KO:K11643 OMA:ERMLLCR OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EvolutionaryTrace:Q14839 GenomeRNAi:1108 NextBio:4598
PMAP-CutDB:Q14839 ArrayExpress:Q14839 Bgee:Q14839 CleanEx:HS_CHD4
Genevestigator:Q14839 GermOnline:ENSG00000111642 Uniprot:Q14839
Length = 1912
Score = 362 (132.5 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 73/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +L+ LK GGHRVLIF+QMT+MLD+LE FL G+ Y R+DG + RQ +
Sbjct: 1050 GKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAI 1109
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HRIGQ + V
Sbjct: 1110 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKV 1169
Query: 157 HIYR 160
IYR
Sbjct: 1170 MIYR 1173
>UNIPROTKB|F1SLR5 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1108 KO:K11643 OMA:ERMLLCR EMBL:CU914489 EMBL:GACC01000070
RefSeq:XP_003126577.3 UniGene:Ssc.25044 Ensembl:ENSSSCT00000000759
GeneID:100515610 KEGG:ssc:100515610 Uniprot:F1SLR5
Length = 1912
Score = 362 (132.5 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 73/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +L+ LK GGHRVLIF+QMT+MLD+LE FL G+ Y R+DG + RQ +
Sbjct: 1050 GKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAI 1109
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HRIGQ + V
Sbjct: 1110 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKV 1169
Query: 157 HIYR 160
IYR
Sbjct: 1170 MIYR 1173
>MGI|MGI:1344380 [details] [associations]
symbol:Chd4 "chromodomain helicase DNA binding protein 4"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001103 "RNA polymerase II repressing
transcription factor binding" evidence=ISO] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=ISO] [GO:0005813 "centrosome" evidence=ISO] [GO:0005856
"cytoskeleton" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IPI] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=ISO;IDA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016818
"hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0043234
"protein complex" evidence=IDA] [GO:0046872 "metal ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 MGI:MGI:1344380 Pfam:PF00385
GO:GO:0005524 GO:GO:0005737 GO:GO:0005813 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 GO:GO:0006351
GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 PROSITE:PS00598
GeneTree:ENSGT00560000076896 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
HOVERGEN:HBG005326 CTD:1108 KO:K11643 OrthoDB:EOG4WH8JX
ChiTaRS:CHD4 EMBL:BC058578 IPI:IPI00396802 RefSeq:NP_666091.1
UniGene:Mm.333388 ProteinModelPortal:Q6PDQ2 SMR:Q6PDQ2
DIP:DIP-59651N IntAct:Q6PDQ2 STRING:Q6PDQ2 PhosphoSite:Q6PDQ2
PaxDb:Q6PDQ2 PRIDE:Q6PDQ2 Ensembl:ENSMUST00000056889 GeneID:107932
KEGG:mmu:107932 UCSC:uc009dtk.1 NextBio:359735 PMAP-CutDB:Q6PDQ2
Bgee:Q6PDQ2 CleanEx:MM_CHD4 Genevestigator:Q6PDQ2
GermOnline:ENSMUSG00000063870 Uniprot:Q6PDQ2
Length = 1915
Score = 362 (132.5 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 73/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +L+ LK GGHRVLIF+QMT+MLD+LE FL G+ Y R+DG + RQ +
Sbjct: 1043 GKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAI 1102
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HRIGQ + V
Sbjct: 1103 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKV 1162
Query: 157 HIYR 160
IYR
Sbjct: 1163 MIYR 1166
>UNIPROTKB|E9PU01 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI01016558 PRIDE:E9PU01 Ensembl:ENSRNOT00000055970
ArrayExpress:E9PU01 Uniprot:E9PU01
Length = 1915
Score = 362 (132.5 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 73/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +L+ LK GGHRVLIF+QMT+MLD+LE FL G+ Y R+DG + RQ +
Sbjct: 1043 GKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAI 1102
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HRIGQ + V
Sbjct: 1103 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKV 1162
Query: 157 HIYR 160
IYR
Sbjct: 1163 MIYR 1166
>FB|FBgn0011604 [details] [associations]
symbol:Iswi "Imitation SWI" species:7227 "Drosophila
melanogaster" [GO:0006338 "chromatin remodeling"
evidence=ISS;NAS;TAS] [GO:0016589 "NURF complex"
evidence=NAS;IDA;TAS] [GO:0005524 "ATP binding" evidence=ISS]
[GO:0005634 "nucleus" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IGI;IDA] [GO:0000166 "nucleotide binding"
evidence=TAS] [GO:0016584 "nucleosome positioning" evidence=IDA]
[GO:0006334 "nucleosome assembly" evidence=IDA] [GO:0016590 "ACF
complex" evidence=NAS;IDA;TAS] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0008623 "CHRAC"
evidence=NAS;IDA;TAS] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA;TAS] [GO:0042766 "nucleosome
mobilization" evidence=IDA;TAS] [GO:0016887 "ATPase activity"
evidence=NAS] [GO:0035060 "brahma complex" evidence=IDA]
[GO:0003678 "DNA helicase activity" evidence=TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0006351 "transcription,
DNA-dependent" evidence=IDA] [GO:0005667 "transcription factor
complex" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0035076 "ecdysone
receptor-mediated signaling pathway" evidence=IGI] [GO:0007517
"muscle organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0042752 "regulation of circadian
rhythm" evidence=IMP] [GO:0006325 "chromatin organization"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0031213 "RSF complex"
evidence=IPI] [GO:0005700 "polytene chromosome" evidence=IDA]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=IDA]
[GO:0035063 "nuclear speck organization" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 EMBL:AE013599 GO:GO:0005524
GO:GO:0045892 GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0042752 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0005667
GO:GO:0048813 GO:GO:0007517 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0005700 GO:GO:0035076 GO:GO:0042766 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0016589 GO:GO:0016590 GO:GO:0008623 GO:GO:0008094
ChiTaRS:SMARCA1 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 EMBL:L27127 EMBL:AY094908 EMBL:BT044562 PIR:A56533
RefSeq:NP_523719.1 RefSeq:NP_725203.1 RefSeq:NP_725204.1
UniGene:Dm.2581 PDB:1OFC PDBsum:1OFC ProteinModelPortal:Q24368
SMR:Q24368 DIP:DIP-24067N IntAct:Q24368 MINT:MINT-252539
STRING:Q24368 PaxDb:Q24368 PRIDE:Q24368 EnsemblMetazoa:FBtr0087841
EnsemblMetazoa:FBtr0087842 EnsemblMetazoa:FBtr0087843 GeneID:36390
KEGG:dme:Dmel_CG8625 CTD:36390 FlyBase:FBgn0011604
InParanoid:Q24368 OMA:EDYCHWR OrthoDB:EOG4M0CGK PhylomeDB:Q24368
EvolutionaryTrace:Q24368 GenomeRNAi:36390 NextBio:798287
Bgee:Q24368 GermOnline:CG8625 GO:GO:0031213 GO:GO:0070615
GO:GO:0035063 Uniprot:Q24368
Length = 1027
Score = 358 (131.1 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 71/133 (53%), Positives = 93/133 (69%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D L+ Y+ GK+ LD +L KL+ G RVLIF+QMTRMLD+LE + ++ + Y RLDG T
Sbjct: 423 DTHLV-YNSGKMAILDKLLPKLQEQGSRVLIFSQMTRMLDILEDYCHWRNYNYCRLDGQT 481
Query: 89 KVDQRQVLMERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRC 147
+ R ++ FNMD + F F+LSTR+GG+GINL AD V+ YDSDWNP MD QA DR
Sbjct: 482 PHEDRNRQIQEFNMDNSAKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQMDLQAMDRA 541
Query: 148 HRIGQTRDVHIYR 160
HRIGQ + V ++R
Sbjct: 542 HRIGQKKQVRVFR 554
>UNIPROTKB|J9NW81 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:AAEX03015287 Ensembl:ENSCAFT00000048002
Uniprot:J9NW81
Length = 1932
Score = 362 (132.5 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 73/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +L+ LK GGHRVLIF+QMT+MLD+LE FL G+ Y R+DG + RQ +
Sbjct: 1070 GKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAI 1129
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HRIGQ + V
Sbjct: 1130 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKV 1189
Query: 157 HIYR 160
IYR
Sbjct: 1190 MIYR 1193
>UNIPROTKB|F1N3F6 [details] [associations]
symbol:CHD4 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0016581 "NuRD complex" evidence=IEA] [GO:0008134
"transcription factor binding" evidence=IEA] [GO:0005813
"centrosome" evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0008270 "zinc ion binding" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005813 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:ERMLLCR EMBL:DAAA02014463 IPI:IPI00877578
Ensembl:ENSBTAT00000019612 ArrayExpress:F1N3F6 Uniprot:F1N3F6
Length = 1934
Score = 362 (132.5 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 73/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +L+ LK GGHRVLIF+QMT+MLD+LE FL G+ Y R+DG + RQ +
Sbjct: 1072 GKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAI 1131
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HRIGQ + V
Sbjct: 1132 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKV 1191
Query: 157 HIYR 160
IYR
Sbjct: 1192 MIYR 1195
>UNIPROTKB|F1LM59 [details] [associations]
symbol:Chd4 "Protein Chd4" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 RGD:620064 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00365698 PRIDE:F1LM59 Ensembl:ENSRNOT00000024864
ArrayExpress:F1LM59 Uniprot:F1LM59
Length = 1945
Score = 362 (132.5 bits), Expect = 1.4e-31, P = 1.4e-31
Identities = 73/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +L+ LK GGHRVLIF+QMT+MLD+LE FL G+ Y R+DG + RQ +
Sbjct: 1071 GKLLLLQKMLKNLKEGGHRVLIFSQMTKMLDLLEDFLEHEGYKYERIDGGITGNMRQEAI 1130
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HRIGQ + V
Sbjct: 1131 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKV 1190
Query: 157 HIYR 160
IYR
Sbjct: 1191 MIYR 1194
>POMBASE|SPAC1250.01 [details] [associations]
symbol:snf21 "ATP-dependent DNA helicase Snf21"
species:4896 "Schizosaccharomyces pombe" [GO:0000790 "nuclear
chromatin" evidence=IC] [GO:0000991 "core RNA polymerase II binding
transcription factor activity" evidence=ISO] [GO:0003677 "DNA
binding" evidence=IC] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=ISS] [GO:0005524 "ATP binding" evidence=IC]
[GO:0005634 "nucleus" evidence=IDA] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=IDA] [GO:0016586 "RSC complex"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 PomBase:SPAC1250.01 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0006338 GO:GO:0000790
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016586 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172362
KO:K11786 EMBL:AB162438 PIR:T37561 RefSeq:NP_594861.1
ProteinModelPortal:Q9UTN6 DIP:DIP-48388N STRING:Q9UTN6
EnsemblFungi:SPAC1250.01.1 GeneID:2542638 KEGG:spo:SPAC1250.01
OMA:WAPSISA OrthoDB:EOG4D565R NextBio:20803687 Uniprot:Q9UTN6
Length = 1199
Score = 358 (131.1 bits), Expect = 1.8e-31, P = 1.8e-31
Identities = 74/150 (49%), Positives = 98/150 (65%)
Query: 17 HPVTSAMCTQFPDPRLIQYDC-----GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLE 71
HP + DP YD GK + LD IL KL GHR+L+F QMT++++++E
Sbjct: 710 HPFVFEDVERSIDPTGFNYDMLWRVSGKFELLDRILPKLFRSGHRILMFFQMTQIMNIME 769
Query: 72 AFLNFHGHIYLRLDGTTKVDQRQVLMERFN-MDARIFCFILSTRSGGVGINLTGADTVVF 130
+L++ YLRLDG+TK D R L+ FN A + F+LSTR+GG+G+NL ADTV+
Sbjct: 770 DYLHYRQWRYLRLDGSTKADDRSKLLGVFNDPTAEVNLFLLSTRAGGLGLNLQTADTVII 829
Query: 131 YDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
+DSDWNP D QAQDR HRIGQT++V IYR
Sbjct: 830 FDSDWNPHQDLQAQDRAHRIGQTKEVRIYR 859
>UNIPROTKB|K7EMY3 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL031847 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:AL035406
HGNC:HGNC:16816 Ensembl:ENST00000462991 Uniprot:K7EMY3
Length = 1060
Score = 357 (130.7 bits), Expect = 1.9e-31, P = 1.9e-31
Identities = 72/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +L+KL+ GHRVLIF+QMT+MLD+LE FL + G+ Y R+DG RQ +
Sbjct: 407 GKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAI 466
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HRIGQ + V
Sbjct: 467 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKV 526
Query: 157 HIYR 160
IYR
Sbjct: 527 MIYR 530
>TAIR|locus:2173644 [details] [associations]
symbol:CHR1 "chromatin remodeling 1" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISM] [GO:0006349
"regulation of gene expression by genetic imprinting" evidence=IMP]
[GO:0044030 "regulation of DNA methylation" evidence=IMP]
[GO:0051574 "positive regulation of histone H3-K9 methylation"
evidence=IMP] [GO:0000786 "nucleosome" evidence=IDA] [GO:0004003
"ATP-dependent DNA helicase activity" evidence=IMP] [GO:0016887
"ATPase activity" evidence=IDA] [GO:0090241 "negative regulation of
histone H4 acetylation" evidence=IMP] [GO:0005515 "protein binding"
evidence=IPI] [GO:0006344 "maintenance of chromatin silencing"
evidence=IMP] [GO:0009294 "DNA mediated transformation"
evidence=IMP] [GO:0032197 "transposition, RNA-mediated"
evidence=IMP] [GO:0006342 "chromatin silencing" evidence=RCA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IMP;RCA] [GO:0008283 "cell proliferation" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0016572 "histone
phosphorylation" evidence=RCA] [GO:0031048 "chromatin silencing by
small RNA" evidence=RCA] [GO:0051567 "histone H3-K9 methylation"
evidence=RCA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0005634 EMBL:CP002688 GenomeReviews:BA000015_GR GO:GO:0003677
GO:GO:0006351 GO:GO:0004003 GO:GO:0006349 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0009294
EMBL:AB018119 GO:GO:0000786 GO:GO:0051574 GO:GO:0044030
GO:GO:0090241 GO:GO:0032197 EMBL:AF143940 EMBL:AY099638
EMBL:BT002161 EMBL:AY699010 EMBL:AY699011 IPI:IPI00524705
RefSeq:NP_201476.1 UniGene:At.28851 ProteinModelPortal:Q9XFH4
SMR:Q9XFH4 STRING:Q9XFH4 PaxDb:Q9XFH4 PRIDE:Q9XFH4
EnsemblPlants:AT5G66750.1 GeneID:836808 KEGG:ath:AT5G66750
TAIR:At5g66750 HOGENOM:HOG000172362 InParanoid:Q9XFH4 OMA:ETFYTAI
PhylomeDB:Q9XFH4 ProtClustDB:CLSN2686877 Genevestigator:Q9XFH4
GO:GO:0006344 GO:GO:0006346 Uniprot:Q9XFH4
Length = 764
Score = 354 (129.7 bits), Expect = 1.9e-31, P = 1.9e-31
Identities = 67/136 (49%), Positives = 96/136 (70%)
Query: 27 FPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDG 86
+P I CGK + L+ +L +L A H+VLIF+Q T++LD+++ + + G R+DG
Sbjct: 513 YPPVEEIVGQCGKFRLLERLLVRLFANNHKVLIFSQWTKLLDIMDYYFSEKGFEVCRIDG 572
Query: 87 TTKVDQRQVLMERFNMDARIFC--FILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQ 144
+ K+D+R+ ++ F+ D + C F+LSTR+GG+GINLT ADT + YDSDWNP MD QA
Sbjct: 573 SVKLDERRRQIKDFS-DEKSSCSIFLLSTRAGGLGINLTAADTCILYDSDWNPQMDLQAM 631
Query: 145 DRCHRIGQTRDVHIYR 160
DRCHRIGQT+ VH+YR
Sbjct: 632 DRCHRIGQTKPVHVYR 647
>RGD|1582725 [details] [associations]
symbol:Chd5 "chromodomain helicase DNA binding protein 5"
species:10116 "Rattus norvegicus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1582725 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OrthoDB:EOG4WH8JX
IPI:IPI00948282 Ensembl:ENSRNOT00000067364 UCSC:RGD:1582725
ArrayExpress:D4A5U0 Uniprot:D4A5U0
Length = 1940
Score = 359 (131.4 bits), Expect = 2.9e-31, P = 2.9e-31
Identities = 77/150 (51%), Positives = 96/150 (64%)
Query: 16 LHPVTSAMCTQFP----DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLE 71
L PV + P D + GKL L +L+KL+ GHRVLIF+QMT+MLD+LE
Sbjct: 996 LFPVAAVEAPMLPNGSYDGSSLVKSSGKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLE 1055
Query: 72 AFLNFHGHIYLRLDGTTKVDQRQVLMERFNMD-ARIFCFILSTRSGGVGINLTGADTVVF 130
FL + G+ Y R+DG RQ ++RFN A+ FCF+LSTR+GG+GINL ADTV+
Sbjct: 1056 DFLEYEGYKYERIDGGITGGLRQEAIDRFNAPGAQQFCFLLSTRAGGLGINLATADTVII 1115
Query: 131 YDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
YDSDWNP D QA R HRIGQ + V IYR
Sbjct: 1116 YDSDWNPHNDIQAFSRAHRIGQNKKVMIYR 1145
>TAIR|locus:2051678 [details] [associations]
symbol:ETL1 species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA;ISS] [GO:0004386 "helicase activity"
evidence=IEA;ISS] [GO:0005524 "ATP binding" evidence=IEA;ISS]
[GO:0005634 "nucleus" evidence=ISM] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 EMBL:CP002685 GenomeReviews:CT485783_GR
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AC005936 HOGENOM:HOG000172362
KO:K14439 EMBL:AY059857 EMBL:BT002576 IPI:IPI00520453 PIR:H84432
RefSeq:NP_178318.1 UniGene:At.13358 ProteinModelPortal:Q9ZUL5
SMR:Q9ZUL5 IntAct:Q9ZUL5 PaxDb:Q9ZUL5 PRIDE:Q9ZUL5
EnsemblPlants:AT2G02090.1 GeneID:814740 KEGG:ath:AT2G02090
TAIR:At2g02090 InParanoid:Q9ZUL5 OMA:CAKISAD PhylomeDB:Q9ZUL5
ProtClustDB:CLSN2683669 ArrayExpress:Q9ZUL5 Genevestigator:Q9ZUL5
Uniprot:Q9ZUL5
Length = 763
Score = 352 (129.0 bits), Expect = 3.2e-31, P = 3.2e-31
Identities = 68/122 (55%), Positives = 90/122 (73%)
Query: 39 KLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLME 98
K ++L +L +K GHRVLIF+Q T MLD+LE L+ G Y RLDG+T+V RQ +++
Sbjct: 589 KCRTLAELLPSMKKSGHRVLIFSQWTSMLDILEWTLDVIGVTYRRLDGSTQVTDRQTIVD 648
Query: 99 RFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHI 158
FN D IF +LSTR+GG G+NLTGADTV+ +D D+NP +D QA+DRCHRIGQT+ V I
Sbjct: 649 TFNNDKSIFACLLSTRAGGQGLNLTGADTVIIHDMDFNPQIDRQAEDRCHRIGQTKPVTI 708
Query: 159 YR 160
+R
Sbjct: 709 FR 710
>UNIPROTKB|H0YJG4 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 EMBL:AL135744 EMBL:AL161747
HGNC:HGNC:20153 Ensembl:ENST00000555935 Uniprot:H0YJG4
Length = 873
Score = 353 (129.3 bits), Expect = 3.4e-31, P = 3.4e-31
Identities = 68/124 (54%), Positives = 91/124 (73%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KLKAGGH+VLIF+QM R LD+LE +L ++Y R+DG + + RQ +
Sbjct: 359 GKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAI 418
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 419 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 478
Query: 157 HIYR 160
+YR
Sbjct: 479 KVYR 482
>UNIPROTKB|F1SSZ2 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
EMBL:FP102454 Ensembl:ENSSSCT00000019561 Uniprot:F1SSZ2
Length = 1667
Score = 357 (130.7 bits), Expect = 3.9e-31, P = 3.9e-31
Identities = 72/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +L+KL+ GHRVLIF+QMT+MLD+LE FL + G+ Y R+DG RQ +
Sbjct: 940 GKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAI 999
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HRIGQ + V
Sbjct: 1000 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKV 1059
Query: 157 HIYR 160
IYR
Sbjct: 1060 MIYR 1063
>UNIPROTKB|F1N544 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:DAAA02048806
IPI:IPI00716282 Ensembl:ENSBTAT00000019119 ArrayExpress:F1N544
Uniprot:F1N544
Length = 1998
Score = 358 (131.1 bits), Expect = 3.9e-31, P = 3.9e-31
Identities = 73/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +LRKLK GHRVLIF+QMT+MLD+LE FL++ G+ Y R+DG RQ +
Sbjct: 1056 GKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAI 1115
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ +DSDWNP D QA R HRIGQ V
Sbjct: 1116 DRFNAHGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKV 1175
Query: 157 HIYR 160
IYR
Sbjct: 1176 MIYR 1179
>UNIPROTKB|E2RTI2 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR EMBL:AAEX03003635
EMBL:AAEX03003636 Ensembl:ENSCAFT00000026729 Uniprot:E2RTI2
Length = 1998
Score = 358 (131.1 bits), Expect = 3.9e-31, P = 3.9e-31
Identities = 73/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +LRKLK GHRVLIF+QMT+MLD+LE FL++ G+ Y R+DG RQ +
Sbjct: 1058 GKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAI 1117
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ +DSDWNP D QA R HRIGQ V
Sbjct: 1118 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKV 1177
Query: 157 HIYR 160
IYR
Sbjct: 1178 MIYR 1181
>UNIPROTKB|Q12873 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0004386 "helicase activity" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0008270
"zinc ion binding" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0007051 "spindle organization" evidence=IDA]
[GO:0005813 "centrosome" evidence=IDA] [GO:0005737 "cytoplasm"
evidence=IDA] [GO:0051297 "centrosome organization" evidence=IDA]
[GO:0006357 "regulation of transcription from RNA polymerase II
promoter" evidence=TAS] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0016581 "NuRD complex" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR001841
InterPro:IPR009071 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005737 GO:GO:0005813
EMBL:CH471108 GO:GO:0005730 GO:GO:0051297 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006357 GO:GO:0006351
GO:GO:0016568 Gene3D:1.10.30.10 GO:GO:0045111 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003
InterPro:IPR019786 PROSITE:PS01359
Pathway_Interaction_DB:hdac_classi_pathway InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0007051 GO:GO:0016581 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOGENOM:HOG000231124
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 EMBL:U91543 EMBL:AF006515 EMBL:U08379 IPI:IPI00373870
IPI:IPI00411592 RefSeq:NP_001005271.2 RefSeq:NP_001005273.1
RefSeq:NP_005843.2 UniGene:Hs.25601 ProteinModelPortal:Q12873
SMR:Q12873 DIP:DIP-32496N IntAct:Q12873 MINT:MINT-1185641
STRING:Q12873 PhosphoSite:Q12873 DMDM:88911273 PaxDb:Q12873
PRIDE:Q12873 Ensembl:ENST00000330494 Ensembl:ENST00000358181
GeneID:1107 KEGG:hsa:1107 UCSC:uc002gje.2 UCSC:uc002gjf.2
GeneCards:GC17P007788 H-InvDB:HIX0013516 HGNC:HGNC:1918
HPA:HPA043368 MIM:602120 neXtProt:NX_Q12873 PharmGKB:PA26454
HOVERGEN:HBG005326 KO:K11642 PhylomeDB:Q12873 ChiTaRS:CHD3
GenomeRNAi:1107 NextBio:4590 ArrayExpress:Q12873 Bgee:Q12873
CleanEx:HS_CHD3 Genevestigator:Q12873 GermOnline:ENSG00000170004
Uniprot:Q12873
Length = 2000
Score = 358 (131.1 bits), Expect = 3.9e-31, P = 3.9e-31
Identities = 73/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +LRKLK GHRVLIF+QMT+MLD+LE FL++ G+ Y R+DG RQ +
Sbjct: 1060 GKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAI 1119
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ +DSDWNP D QA R HRIGQ V
Sbjct: 1120 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKV 1179
Query: 157 HIYR 160
IYR
Sbjct: 1180 MIYR 1183
>UNIPROTKB|F1ST12 [details] [associations]
symbol:CHD3 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA] [GO:0006333
"chromatin assembly or disassembly" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
Gene3D:1.10.30.10 GO:GO:0006333 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
GeneTree:ENSGT00560000076896 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 CTD:1107 KO:K11642 OMA:EPEPGYR
EMBL:CU972380 RefSeq:XP_003132000.1 UniGene:Ssc.1663
Ensembl:ENSSSCT00000019548 GeneID:100188906 KEGG:ssc:100188906
Uniprot:F1ST12
Length = 2002
Score = 358 (131.1 bits), Expect = 3.9e-31, P = 3.9e-31
Identities = 73/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +LRKLK GHRVLIF+QMT+MLD+LE FL++ G+ Y R+DG RQ +
Sbjct: 1060 GKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAI 1119
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ +DSDWNP D QA R HRIGQ V
Sbjct: 1120 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKV 1179
Query: 157 HIYR 160
IYR
Sbjct: 1180 MIYR 1183
>UNIPROTKB|E9PG89 [details] [associations]
symbol:CHD3 "Chromodomain-helicase-DNA-binding protein 3"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0006333 "chromatin assembly or
disassembly" evidence=IEA] [GO:0016581 "NuRD complex" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IDA] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005730 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 GO:GO:0045111
GO:GO:0006333 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
GO:GO:0016581 InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
CTD:1107 RefSeq:NP_001005271.2 UniGene:Hs.25601 GeneID:1107
KEGG:hsa:1107 HGNC:HGNC:1918 KO:K11642 ChiTaRS:CHD3 GenomeRNAi:1107
NextBio:4590 EMBL:AC104581 IPI:IPI00465222
ProteinModelPortal:E9PG89 SMR:E9PG89 PRIDE:E9PG89
Ensembl:ENST00000380358 UCSC:uc002gjd.2 OMA:EPEPGYR
ArrayExpress:E9PG89 Bgee:E9PG89 Uniprot:E9PG89
Length = 2059
Score = 358 (131.1 bits), Expect = 4.0e-31, P = 4.0e-31
Identities = 73/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +LRKLK GHRVLIF+QMT+MLD+LE FL++ G+ Y R+DG RQ +
Sbjct: 1119 GKLMLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAI 1178
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ +DSDWNP D QA R HRIGQ V
Sbjct: 1179 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKV 1238
Query: 157 HIYR 160
IYR
Sbjct: 1239 MIYR 1242
>UNIPROTKB|F1RIM3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:FP102454 Ensembl:ENSSSCT00000003736 Uniprot:F1RIM3
Length = 1723
Score = 357 (130.7 bits), Expect = 4.0e-31, P = 4.0e-31
Identities = 72/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +L+KL+ GHRVLIF+QMT+MLD+LE FL + G+ Y R+DG RQ +
Sbjct: 956 GKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAI 1015
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HRIGQ + V
Sbjct: 1016 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKV 1075
Query: 157 HIYR 160
IYR
Sbjct: 1076 MIYR 1079
>UNIPROTKB|E2R1M3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:AAEX03003895 EMBL:AAEX03003896 EMBL:AAEX03003897
Ensembl:ENSCAFT00000031086 Uniprot:E2R1M3
Length = 1812
Score = 357 (130.7 bits), Expect = 4.3e-31, P = 4.3e-31
Identities = 72/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +L+KL+ GHRVLIF+QMT+MLD+LE FL + G+ Y R+DG RQ +
Sbjct: 887 GKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAI 946
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HRIGQ + V
Sbjct: 947 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKV 1006
Query: 157 HIYR 160
IYR
Sbjct: 1007 MIYR 1010
>SGD|S000000449 [details] [associations]
symbol:ISW1 "ATPase subunit of imitation-switch (ISWI) class
chromatin remodelers" species:4932 "Saccharomyces cerevisiae"
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0031491 "nucleosome binding" evidence=IEA;IDA] [GO:0003677 "DNA
binding" evidence=IEA;IDA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0000182 "rDNA
binding" evidence=IDA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] [GO:0070870 "heterochromatin
maintenance involved in chromatin silencing" evidence=IGI;IMP]
[GO:0016587 "Isw1 complex" evidence=IPI] [GO:0006354 "DNA-dependent
transcription, elongation" evidence=IMP;IDA] [GO:0006338 "chromatin
remodeling" evidence=IEA;IGI;IMP;IPI] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA;IDA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IMP] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000000449 GO:GO:0005524 GO:GO:0006200
GO:GO:0045944 EMBL:BK006936 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0006338 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
GO:GO:0034401 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006363 GO:GO:0006354 GO:GO:0006369
GeneTree:ENSGT00670000098110 GO:GO:0030874 GO:GO:0000182
GO:GO:0001178 GO:GO:0070870 GO:GO:0016587 PDB:2Y9Y PDB:2Y9Z
PDBsum:2Y9Y PDBsum:2Y9Z HOGENOM:HOG000192862 SUPFAM:SSF101224
EMBL:Z36114 PIR:S46122 RefSeq:NP_009804.1 ProteinModelPortal:P38144
SMR:P38144 DIP:DIP-6601N IntAct:P38144 MINT:MINT-614918
STRING:P38144 PaxDb:P38144 PeptideAtlas:P38144 EnsemblFungi:YBR245C
GeneID:852547 KEGG:sce:YBR245C CYGD:YBR245c OMA:LEMITHG
OrthoDB:EOG48SM27 EvolutionaryTrace:P38144 NextBio:971628
Genevestigator:P38144 GermOnline:YBR245C Uniprot:P38144
Length = 1129
Score = 354 (129.7 bits), Expect = 4.4e-31, P = 4.4e-31
Identities = 69/133 (51%), Positives = 94/133 (70%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D L+ Y+ KLQ LD +L+KLK G RVLIF+QM+R+LD+LE + F + Y R+DG+T
Sbjct: 494 DEHLV-YNAAKLQVLDKLLKKLKEEGSRVLIFSQMSRLLDILEDYCYFRNYEYCRIDGST 552
Query: 89 KVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRC 147
+ R ++ +N D++ F F+L+TR+GG+GINLT AD VV YDSDWNP D QA DR
Sbjct: 553 AHEDRIQAIDDYNAPDSKKFVFLLTTRAGGLGINLTSADVVVLYDSDWNPQADLQAMDRA 612
Query: 148 HRIGQTRDVHIYR 160
HRIGQ + V ++R
Sbjct: 613 HRIGQKKQVKVFR 625
>UNIPROTKB|F1MFF9 [details] [associations]
symbol:Bt.62145 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270 "zinc ion
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0046872 GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 GeneTree:ENSGT00560000076896
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
OMA:KRIDDGD EMBL:DAAA02043090 IPI:IPI00688794
Ensembl:ENSBTAT00000010688 Uniprot:F1MFF9
Length = 1852
Score = 357 (130.7 bits), Expect = 4.5e-31, P = 4.5e-31
Identities = 72/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +L+KL+ GHRVLIF+QMT+MLD+LE FL + G+ Y R+DG RQ +
Sbjct: 970 GKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAI 1029
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HRIGQ + V
Sbjct: 1030 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKV 1089
Query: 157 HIYR 160
IYR
Sbjct: 1090 MIYR 1093
>UNIPROTKB|Q8TDI0 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
EMBL:AF425231 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0046872 GO:GO:0003677 GO:GO:0008270
GO:GO:0006351 GO:GO:0016568 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598
HOGENOM:HOG000231124 InterPro:IPR009462 InterPro:IPR009463
Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326 OrthoDB:EOG4WH8JX
EMBL:AL035406 EMBL:AL117491 EMBL:AB007913 IPI:IPI00152535
PIR:T17269 RefSeq:NP_056372.1 UniGene:Hs.522898
ProteinModelPortal:Q8TDI0 SMR:Q8TDI0 IntAct:Q8TDI0 STRING:Q8TDI0
PhosphoSite:Q8TDI0 DMDM:51701343 PaxDb:Q8TDI0 PRIDE:Q8TDI0
DNASU:26038 Ensembl:ENST00000262450 GeneID:26038 KEGG:hsa:26038
UCSC:uc001amb.2 CTD:26038 GeneCards:GC01M006096 HGNC:HGNC:16816
HPA:HPA015809 MIM:610771 neXtProt:NX_Q8TDI0 PharmGKB:PA134969178
InParanoid:Q8TDI0 KO:K14435 OMA:KRIDDGD PhylomeDB:Q8TDI0
ChiTaRS:CHD5 GenomeRNAi:26038 NextBio:47863 ArrayExpress:Q8TDI0
Bgee:Q8TDI0 CleanEx:HS_CHD5 Genevestigator:Q8TDI0
GermOnline:ENSG00000116254 Uniprot:Q8TDI0
Length = 1954
Score = 357 (130.7 bits), Expect = 4.8e-31, P = 4.8e-31
Identities = 72/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +L+KL+ GHRVLIF+QMT+MLD+LE FL + G+ Y R+DG RQ +
Sbjct: 1024 GKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAI 1083
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HRIGQ + V
Sbjct: 1084 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKV 1143
Query: 157 HIYR 160
IYR
Sbjct: 1144 MIYR 1147
>UNIPROTKB|H3BTW3 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00384 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 EMBL:AC007906
EMBL:AC079416 HGNC:HGNC:25701 Ensembl:ENST00000565803 Bgee:H3BTW3
Uniprot:H3BTW3
Length = 1099
Score = 353 (129.3 bits), Expect = 5.4e-31, P = 5.4e-31
Identities = 69/130 (53%), Positives = 93/130 (71%)
Query: 32 LIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVD 91
+IQ GKL +D +L K+KAGGH+VLIF+QM R LD+LE +L ++Y R+DG + +
Sbjct: 703 MIQ-SAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGN 761
Query: 92 QRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRI 150
RQ ++RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRI
Sbjct: 762 LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 821
Query: 151 GQTRDVHIYR 160
GQ + V +YR
Sbjct: 822 GQNKAVKVYR 831
>UNIPROTKB|D4A4J2 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
Pfam:PF08880 PROSITE:PS51194 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
IPI:IPI00777186 Ensembl:ENSRNOT00000016283 ArrayExpress:D4A4J2
Uniprot:D4A4J2
Length = 1506
Score = 355 (130.0 bits), Expect = 5.5e-31, P = 5.5e-31
Identities = 67/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A HRVL+F QMT ++ ++E + F +YLRLDGTTK + R L+
Sbjct: 1057 GKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALL 1116
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
++FN ++ F F+LSTR+GG+G+NL ADTVV +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1117 KKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEV 1176
Query: 157 HIYR 160
+ R
Sbjct: 1177 RVLR 1180
>ASPGD|ASPL0000052010 [details] [associations]
symbol:AN1255 species:162425 "Emericella nidulans"
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0000070
"mitotic sister chromatid segregation" evidence=IEA] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IEA]
[GO:0060303 "regulation of nucleosome density" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:BN001308 GO:GO:0003677 EMBL:AACD01000017
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
KO:K11367 HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB RefSeq:XP_658859.1
ProteinModelPortal:Q5BDX5 STRING:Q5BDX5
EnsemblFungi:CADANIAT00001368 GeneID:2877029 KEGG:ani:AN1255.2
OMA:GPRRMAI Uniprot:Q5BDX5
Length = 1517
Score = 355 (130.0 bits), Expect = 5.5e-31, P = 5.5e-31
Identities = 68/124 (54%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK+ LD +L KLK GHRVLIF+QM +MLD+L ++ + G+ Y RLDGT R++ +
Sbjct: 756 GKMMLLDQLLAKLKRDGHRVLIFSQMVKMLDILGDYMEYRGYTYQRLDGTIPSASRRLAI 815
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
E +N D+ F FILSTR+GG+GINL ADTV+ +DSDWNP D QA R HRIGQT+ V
Sbjct: 816 EHYNAPDSSDFAFILSTRAGGLGINLMTADTVILFDSDWNPQADLQAMARAHRIGQTKPV 875
Query: 157 HIYR 160
+YR
Sbjct: 876 SVYR 879
>UNIPROTKB|A5PKK5 [details] [associations]
symbol:SMARCA2 "SMARCA2 protein" species:9913 "Bos taurus"
[GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OMA:PQEGMHQ GO:GO:0035887 OrthoDB:EOG418BMJ EMBL:DAAA02022747
EMBL:DAAA02022748 EMBL:DAAA02022749 EMBL:BC142521 IPI:IPI00854472
RefSeq:NP_001092585.1 UniGene:Bt.63204 SMR:A5PKK5 STRING:A5PKK5
Ensembl:ENSBTAT00000035681 GeneID:540904 KEGG:bta:540904
InParanoid:A5PKK5 NextBio:20878906 Uniprot:A5PKK5
Length = 1554
Score = 355 (130.0 bits), Expect = 5.7e-31, P = 5.7e-31
Identities = 67/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A HRVL+F QMT ++ ++E + F +YLRLDGTTK + R L+
Sbjct: 1032 GKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALL 1091
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
++FN ++ F F+LSTR+GG+G+NL ADTVV +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1092 KKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEV 1151
Query: 157 HIYR 160
+ R
Sbjct: 1152 RVLR 1155
>UNIPROTKB|E2RKP4 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0071778 "WINAC complex" evidence=IEA]
[GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0030308 "negative regulation of cell growth"
evidence=IEA] [GO:0016514 "SWI/SNF complex" evidence=IEA]
[GO:0008285 "negative regulation of cell proliferation"
evidence=IEA] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=IEA] [GO:0000790 "nuclear chromatin"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0045892 GO:GO:0008285
GO:GO:0030308 GO:GO:0045944 GO:GO:0044212 GO:GO:0045111
GO:GO:0000790 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0071778 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0035887
EMBL:AAEX03000600 Ensembl:ENSCAFT00000003206 NextBio:20852013
Uniprot:E2RKP4
Length = 1556
Score = 355 (130.0 bits), Expect = 5.7e-31, P = 5.7e-31
Identities = 67/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A HRVL+F QMT ++ ++E + F +YLRLDGTTK + R L+
Sbjct: 1034 GKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALL 1093
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
++FN ++ F F+LSTR+GG+G+NL ADTVV +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1094 KKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEV 1153
Query: 157 HIYR 160
+ R
Sbjct: 1154 RVLR 1157
>UNIPROTKB|F1SJG5 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071778 "WINAC complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0045111 "intermediate filament cytoskeleton"
evidence=IEA] [GO:0044212 "transcription regulatory region DNA
binding" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0016514 "SWI/SNF complex"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0000790
"nuclear chromatin" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 OMA:PQEGMHQ GO:GO:0035887
EMBL:CT998562 EMBL:CU062411 Ensembl:ENSSSCT00000005766
Uniprot:F1SJG5
Length = 1556
Score = 355 (130.0 bits), Expect = 5.7e-31, P = 5.7e-31
Identities = 67/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A HRVL+F QMT ++ ++E + F +YLRLDGTTK + R L+
Sbjct: 1034 GKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALL 1093
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
++FN ++ F F+LSTR+GG+G+NL ADTVV +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1094 KKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEV 1153
Query: 157 HIYR 160
+ R
Sbjct: 1154 RVLR 1157
>UNIPROTKB|E1BS47 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02022009 EMBL:AADN02022010
IPI:IPI00598234 Ensembl:ENSGALT00000005903 ArrayExpress:E1BS47
Uniprot:E1BS47
Length = 1326
Score = 354 (129.7 bits), Expect = 5.7e-31, P = 5.7e-31
Identities = 70/124 (56%), Positives = 90/124 (72%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KLKAGGHRVLIF+QM R LD+LE +L + Y R+DG + + RQ +
Sbjct: 476 GKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAI 535
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 536 DRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSV 595
Query: 157 HIYR 160
IYR
Sbjct: 596 KIYR 599
>UNIPROTKB|J9P5P2 [details] [associations]
symbol:SMARCA2 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 OMA:PQEGMHQ EMBL:AAEX03000600 RefSeq:XP_850159.1
Ensembl:ENSCAFT00000046362 GeneID:476335 KEGG:cfa:476335
Uniprot:J9P5P2
Length = 1574
Score = 355 (130.0 bits), Expect = 5.8e-31, P = 5.8e-31
Identities = 67/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A HRVL+F QMT ++ ++E + F +YLRLDGTTK + R L+
Sbjct: 1034 GKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALL 1093
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
++FN ++ F F+LSTR+GG+G+NL ADTVV +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1094 KKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEV 1153
Query: 157 HIYR 160
+ R
Sbjct: 1154 RVLR 1157
>MGI|MGI:99603 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000790 "nuclear chromatin" evidence=ISO]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=ISO] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0006325 "chromatin organization"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0008285 "negative regulation of cell
proliferation" evidence=IMP] [GO:0016514 "SWI/SNF complex"
evidence=ISO;TAS] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IMP] [GO:0044212 "transcription regulatory region DNA
binding" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0071564 "npBAF complex"
evidence=IDA] [GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778
"WINAC complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 MGI:MGI:99603 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0007399 GO:GO:0030308
GO:GO:0045944 GO:GO:0044212 GO:GO:0045111 GO:GO:0000790
GO:GO:0071564 GO:GO:0016514 GO:GO:0071565 GO:GO:0004386
GO:GO:0001105 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778 KO:K11647
ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
EMBL:BC075641 IPI:IPI01018407 RefSeq:NP_035546.2 UniGene:Mm.313303
ProteinModelPortal:Q6DIC0 SMR:Q6DIC0 DIP:DIP-48888N STRING:Q6DIC0
PhosphoSite:Q6DIC0 PaxDb:Q6DIC0 PRIDE:Q6DIC0 GeneID:67155
KEGG:mmu:67155 UCSC:uc008hbn.1 InParanoid:Q6DIC0 OrthoDB:EOG418BMJ
NextBio:323746 Bgee:Q6DIC0 Genevestigator:Q6DIC0 Uniprot:Q6DIC0
Length = 1577
Score = 355 (130.0 bits), Expect = 5.8e-31, P = 5.8e-31
Identities = 67/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A HRVL+F QMT ++ ++E + F +YLRLDGTTK + R L+
Sbjct: 1055 GKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALL 1114
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
++FN ++ F F+LSTR+GG+G+NL ADTVV +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1115 KKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEV 1174
Query: 157 HIYR 160
+ R
Sbjct: 1175 RVLR 1178
>UNIPROTKB|P51531 [details] [associations]
symbol:SMARCA2 "Probable global transcription activator
SNF2L2" species:9606 "Homo sapiens" [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0007399
"nervous system development" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0035887 "aortic
smooth muscle cell differentiation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0071564 "npBAF complex"
evidence=ISS] [GO:0071565 "nBAF complex" evidence=ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;IDA] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=IDA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IDA] [GO:0003713
"transcription coactivator activity" evidence=TAS] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=TAS]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IDA;TAS] [GO:0071778 "WINAC
complex" evidence=IDA] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IDA] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0030308 "negative regulation of cell
growth" evidence=IMP] [GO:0006338 "chromatin remodeling"
evidence=TAS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=TAS] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005730
"nucleolus" evidence=IDA] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=IDA] [GO:0045111 "intermediate
filament cytoskeleton" evidence=IDA] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0008285 GO:GO:0007399
GO:GO:0005654 GO:GO:0030308 GO:GO:0006338 GO:GO:0000122
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 EMBL:CH471071 GO:GO:0004386
Pathway_Interaction_DB:ar_tf_pathway GO:GO:0001105 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
KO:K11647 ChiTaRS:SMARCA2 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0008094 EMBL:X72889 EMBL:D26155 EMBL:AL359076 EMBL:AL138755
IPI:IPI00386718 IPI:IPI00514648 PIR:S39580 PIR:S45251
RefSeq:NP_003061.3 RefSeq:NP_620614.2 UniGene:Hs.298990 PDB:2DAT
PDBsum:2DAT ProteinModelPortal:P51531 SMR:P51531 DIP:DIP-29005N
IntAct:P51531 MINT:MINT-1898892 STRING:P51531 PhosphoSite:P51531
DMDM:212276472 PaxDb:P51531 PRIDE:P51531 DNASU:6595
Ensembl:ENST00000349721 Ensembl:ENST00000357248
Ensembl:ENST00000382194 Ensembl:ENST00000382203 GeneID:6595
KEGG:hsa:6595 UCSC:uc003zhc.3 UCSC:uc003zhd.3 CTD:6595
GeneCards:GC09P002005 HGNC:HGNC:11098 HPA:HPA029981 MIM:600014
MIM:601358 neXtProt:NX_P51531 Orphanet:3051 PharmGKB:PA35948
HOGENOM:HOG000172363 HOVERGEN:HBG056636 InParanoid:P51531
OMA:PQEGMHQ PhylomeDB:P51531 EvolutionaryTrace:P51531
GenomeRNAi:6595 NextBio:25649 PMAP-CutDB:P51531 ArrayExpress:P51531
Bgee:P51531 CleanEx:HS_SMARCA2 Genevestigator:P51531
GermOnline:ENSG00000080503 GO:GO:0035887 Uniprot:P51531
Length = 1590
Score = 355 (130.0 bits), Expect = 5.9e-31, P = 5.9e-31
Identities = 67/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A HRVL+F QMT ++ ++E + F +YLRLDGTTK + R L+
Sbjct: 1050 GKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALL 1109
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
++FN ++ F F+LSTR+GG+G+NL ADTVV +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1110 KKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEV 1169
Query: 157 HIYR 160
+ R
Sbjct: 1170 RVLR 1173
>RGD|1302988 [details] [associations]
symbol:Smarca2 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 2"
species:10116 "Rattus norvegicus" [GO:0000790 "nuclear chromatin"
evidence=ISO] [GO:0001105 "RNA polymerase II transcription
coactivator activity" evidence=ISO] [GO:0005634 "nucleus"
evidence=ISO] [GO:0008285 "negative regulation of cell
proliferation" evidence=ISO] [GO:0016514 "SWI/SNF complex"
evidence=ISO] [GO:0030308 "negative regulation of cell growth"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043231 "intracellular
membrane-bounded organelle" evidence=ISO] [GO:0044212
"transcription regulatory region DNA binding" evidence=ISO]
[GO:0045111 "intermediate filament cytoskeleton" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=ISO] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO] [GO:0071565 "nBAF
complex" evidence=ISO] [GO:0071778 "WINAC complex" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 CTD:6595 HOGENOM:HOG000172363 HOVERGEN:HBG056636
OrthoDB:EOG418BMJ IPI:IPI00464435 EMBL:AY643746
RefSeq:NP_001004446.1 UniGene:Rn.94939 ProteinModelPortal:Q6DUH4
SMR:Q6DUH4 STRING:Q6DUH4 GeneID:361745 KEGG:rno:361745
UCSC:RGD:1302988 InParanoid:Q6DUH4 NextBio:677480
Genevestigator:Q6DUH4 Uniprot:Q6DUH4
Length = 1597
Score = 355 (130.0 bits), Expect = 5.9e-31, P = 5.9e-31
Identities = 67/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A HRVL+F QMT ++ ++E + F +YLRLDGTTK + R L+
Sbjct: 1057 GKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALL 1116
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
++FN ++ F F+LSTR+GG+G+NL ADTVV +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1117 KKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEV 1176
Query: 157 HIYR 160
+ R
Sbjct: 1177 RVLR 1180
>UNIPROTKB|E9PTG1 [details] [associations]
symbol:Smarca2 "Protein Smarca2" species:10116 "Rattus
norvegicus" [GO:0000790 "nuclear chromatin" evidence=IEA]
[GO:0001105 "RNA polymerase II transcription coactivator activity"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0008285 "negative
regulation of cell proliferation" evidence=IEA] [GO:0016514
"SWI/SNF complex" evidence=IEA] [GO:0030308 "negative regulation of
cell growth" evidence=IEA] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=IEA] [GO:0044212 "transcription
regulatory region DNA binding" evidence=IEA] [GO:0045111
"intermediate filament cytoskeleton" evidence=IEA] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] [GO:0071778 "WINAC complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:1302988 GO:GO:0005524 GO:GO:0045892
GO:GO:0008285 GO:GO:0030308 GO:GO:0045944 GO:GO:0044212
GO:GO:0045111 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0071565 GO:GO:0004386 GO:GO:0001105 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ GO:GO:0035887 IPI:IPI00464435
Ensembl:ENSRNOT00000016740 ArrayExpress:E9PTG1 Uniprot:E9PTG1
Length = 1597
Score = 355 (130.0 bits), Expect = 5.9e-31, P = 5.9e-31
Identities = 67/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A HRVL+F QMT ++ ++E + F +YLRLDGTTK + R L+
Sbjct: 1057 GKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALL 1116
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
++FN ++ F F+LSTR+GG+G+NL ADTVV +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1117 KKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVVIFDSDWNPHQDLQAQDRAHRIGQQNEV 1176
Query: 157 HIYR 160
+ R
Sbjct: 1177 RVLR 1180
>RGD|1311923 [details] [associations]
symbol:Chd3 "chromodomain helicase DNA binding protein 3"
species:10116 "Rattus norvegicus" [GO:0005634 "nucleus"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005813 "centrosome" evidence=ISO]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISO]
[GO:0007051 "spindle organization" evidence=ISO] [GO:0016581 "NuRD
complex" evidence=ISO] [GO:0045111 "intermediate filament
cytoskeleton" evidence=ISO] [GO:0051297 "centrosome organization"
evidence=ISO] InterPro:IPR001841 InterPro:IPR009071
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 HOVERGEN:HBG005326
IPI:IPI00369880 EMBL:AY903245 EMBL:AY903246 UniGene:Rn.232095
STRING:Q2KML1 UCSC:RGD:1311923 Genevestigator:Q2KML1 Uniprot:Q2KML1
Length = 1925
Score = 356 (130.4 bits), Expect = 6.0e-31, P = 6.0e-31
Identities = 73/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +LRKLK GHRVLIF+QMT+MLD+LE FL++ G+ Y R+DG RQ +
Sbjct: 1016 GKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAI 1075
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ +DSDWNP D QA R HRIGQ V
Sbjct: 1076 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKV 1135
Query: 157 HIYR 160
IYR
Sbjct: 1136 MIYR 1139
>UNIPROTKB|F1LPP7 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 IPI:IPI00369880
Ensembl:ENSRNOT00000057060 Uniprot:F1LPP7
Length = 2020
Score = 356 (130.4 bits), Expect = 6.4e-31, P = 6.4e-31
Identities = 73/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +LRKLK GHRVLIF+QMT+MLD+LE FL++ G+ Y R+DG RQ +
Sbjct: 1111 GKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAI 1170
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ +DSDWNP D QA R HRIGQ V
Sbjct: 1171 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKV 1230
Query: 157 HIYR 160
IYR
Sbjct: 1231 MIYR 1234
>UNIPROTKB|F1M7Q0 [details] [associations]
symbol:Chd3 "Protein Chd3" species:10116 "Rattus
norvegicus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR009071 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 RGD:1311923 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:1.10.30.10 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0008026 InterPro:IPR023780 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 OMA:EPEPGYR
IPI:IPI00959834 Ensembl:ENSRNOT00000012983 Uniprot:F1M7Q0
Length = 2054
Score = 356 (130.4 bits), Expect = 6.6e-31, P = 6.6e-31
Identities = 73/124 (58%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +LRKLK GHRVLIF+QMT+MLD+LE FL++ G+ Y R+DG RQ +
Sbjct: 1111 GKLLLLQKMLRKLKEQGHRVLIFSQMTKMLDLLEDFLDYEGYKYERIDGGITGALRQEAI 1170
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ FCF+LSTR+GG+GINL ADTV+ +DSDWNP D QA R HRIGQ V
Sbjct: 1171 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIFDSDWNPHNDIQAFSRAHRIGQANKV 1230
Query: 157 HIYR 160
IYR
Sbjct: 1231 MIYR 1234
>ZFIN|ZDB-GENE-070912-179 [details] [associations]
symbol:chd7 "chromodomain helicase DNA binding
protein 7" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0007368 "determination of left/right symmetry"
evidence=IMP] [GO:0001756 "somitogenesis" evidence=IMP] [GO:0060041
"retina development in camera-type eye" evidence=IMP] [GO:0021602
"cranial nerve morphogenesis" evidence=IMP] [GO:0001947 "heart
looping" evidence=IMP] [GO:0030282 "bone mineralization"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0014029 "neural crest formation" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-070912-179 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0001756 GO:GO:0042472
GO:GO:0060041 GO:GO:0004386 GO:GO:0001947 GO:GO:0030282
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
GO:GO:0021602 EMBL:CR450710 GO:GO:0014029 IPI:IPI00493585
Ensembl:ENSDART00000016208 Ensembl:ENSDART00000135230
Uniprot:F1QGL1
Length = 3140
Score = 358 (131.1 bits), Expect = 6.8e-31, P = 6.8e-31
Identities = 76/154 (49%), Positives = 102/154 (66%)
Query: 8 ELRPKLRLLHPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRML 67
++ + R HP+ +F +IQ GKL +D +L KLKAGGHRVLIF+QM R L
Sbjct: 1316 KIMEEFRETHPLDQP---EFHLQAMIQA-AGKLVLIDKLLPKLKAGGHRVLIFSQMVRCL 1371
Query: 68 DVLEAFLNFHGHIYLRLDGTTKVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGAD 126
D+LE +L + Y R+DG + + RQ ++RF+ D+ F F+L TR+GG+GINLT AD
Sbjct: 1372 DILEDYLIQRRYPYERIDGRVRGNLRQAAIDRFSRPDSDRFVFLLCTRAGGLGINLTAAD 1431
Query: 127 TVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
T + +DSDWNP D QAQ RCHRIGQ++ V IYR
Sbjct: 1432 TCIIFDSDWNPQNDLQAQARCHRIGQSKSVKIYR 1465
>UNIPROTKB|I3LTT5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0004386 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 EMBL:CU695129
Ensembl:ENSSSCT00000027860 Uniprot:I3LTT5
Length = 778
Score = 349 (127.9 bits), Expect = 7.0e-31, P = 7.0e-31
Identities = 68/133 (51%), Positives = 94/133 (70%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D ++ + GK+ LD +L KLK G RVLIF+QMTR+LD+LE + + G+ Y RLDG T
Sbjct: 481 DEHIVS-NSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQT 539
Query: 89 KVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRC 147
++R+ +E FN+ ++ F F+LSTR+GG+GINL AD V+ YDSDWNP +D QA DR
Sbjct: 540 PHEEREEAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRA 599
Query: 148 HRIGQTRDVHIYR 160
HRIGQ + V ++R
Sbjct: 600 HRIGQKKPVRVFR 612
>UNIPROTKB|E1C2F7 [details] [associations]
symbol:E1C2F7 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=IEA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IEA] [GO:0008285
"negative regulation of cell proliferation" evidence=IEA]
[GO:0016514 "SWI/SNF complex" evidence=IEA] [GO:0030308 "negative
regulation of cell growth" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0044212
"transcription regulatory region DNA binding" evidence=IEA]
[GO:0045111 "intermediate filament cytoskeleton" evidence=IEA]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565
"nBAF complex" evidence=IEA] [GO:0071778 "WINAC complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045892 GO:GO:0008285 GO:GO:0030308 GO:GO:0045944
GO:GO:0044212 GO:GO:0045111 GO:GO:0000790 GO:GO:0071564
GO:GO:0016514 GO:GO:0071565 GO:GO:0004386 GO:GO:0001105
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0071778
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OMA:PQEGMHQ EMBL:AADN02068434 EMBL:AADN02068435 EMBL:AADN02068436
EMBL:AADN02068437 EMBL:AADN02068438 EMBL:AADN02068439
EMBL:AADN02068440 EMBL:AADN02068441 IPI:IPI00583413
Ensembl:ENSGALT00000016528 Uniprot:E1C2F7
Length = 1546
Score = 354 (129.7 bits), Expect = 7.2e-31, P = 7.2e-31
Identities = 66/124 (53%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A HRVL+F QMT ++ ++E + F +YLRLDGTTK + R L+
Sbjct: 1024 GKFELLDRILPKLRATNHRVLLFCQMTSLMTIMEDYFAFRNFLYLRLDGTTKSEDRAALL 1083
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
++FN ++ F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1084 KKFNEPGSQYFIFLLSTRAGGLGLNLQAADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1143
Query: 157 HIYR 160
+ R
Sbjct: 1144 RVLR 1147
>WB|WBGene00016868 [details] [associations]
symbol:C52B9.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:FO080644 PIR:T28937 RefSeq:NP_508736.1
ProteinModelPortal:Q22944 SMR:Q22944 STRING:Q22944 PaxDb:Q22944
EnsemblMetazoa:C52B9.8 GeneID:180705 KEGG:cel:CELE_C52B9.8
UCSC:C52B9.8 CTD:180705 WormBase:C52B9.8 InParanoid:Q22944
NextBio:910548 Uniprot:Q22944
Length = 1336
Score = 353 (129.3 bits), Expect = 7.4e-31, P = 7.4e-31
Identities = 77/144 (53%), Positives = 99/144 (68%)
Query: 24 CTQFPDPRLIQ----YDC-GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHG 78
C F D R I Y GKL+ L IL KL+A GHRVL+F QMT M+ ++E FL G
Sbjct: 664 CRNFWDARFISAVDLYRVSGKLELLSRILPKLQATGHRVLMFFQMTSMMTIVEDFLA-GG 722
Query: 79 HI-YLRLDGTTKVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWN 136
I YLRLDG+TK D+R L+++FN ++ F F+LSTR+GG+G+NL ADTV+ +DSDWN
Sbjct: 723 TIQYLRLDGSTKPDERGALLDKFNAPNSEYFLFMLSTRAGGLGLNLQTADTVIIFDSDWN 782
Query: 137 PTMDAQAQDRCHRIGQTRDVHIYR 160
P D QAQDR HRIGQ +V ++R
Sbjct: 783 PHQDMQAQDRAHRIGQKAEVRVFR 806
>DICTYBASE|DDB_G0280705 [details] [associations]
symbol:DDB_G0280705 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=ISS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00717
dictyBase:DDB_G0280705 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0003682 EMBL:AAFI02000037
GO:GO:0004003 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
KO:K14437 RefSeq:XP_641133.1 ProteinModelPortal:Q54UZ8
EnsemblProtists:DDB0220644 GeneID:8622691 KEGG:ddi:DDB_G0280705
InParanoid:Q54UZ8 OMA:YPHERID ProtClustDB:CLSZ2846801
Uniprot:Q54UZ8
Length = 2373
Score = 356 (130.4 bits), Expect = 7.9e-31, P = 7.9e-31
Identities = 69/131 (52%), Positives = 95/131 (72%)
Query: 31 RLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKV 90
+LIQ GKL +D +L KLK G H+VLIF+QM +LD+L+ +L + G+ + R+DG+ K
Sbjct: 827 KLIQAS-GKLVLIDKLLPKLKLGNHKVLIFSQMVSVLDILDDYLTYRGYPHERIDGSIKG 885
Query: 91 DQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHR 149
+ RQ ++RF+ D+ F F+L TR+GG+GINLT ADTV+ +DSDWNP D QAQ RCHR
Sbjct: 886 NDRQAAIDRFSKPDSDRFVFLLCTRAGGIGINLTAADTVIIFDSDWNPQNDLQAQARCHR 945
Query: 150 IGQTRDVHIYR 160
IGQ + V +YR
Sbjct: 946 IGQDKMVKVYR 956
>ZFIN|ZDB-GENE-030131-6320 [details] [associations]
symbol:chd8 "chromodomain helicase DNA binding
protein 8" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0071339 "MLL1 complex" evidence=ISS] [GO:0016055 "Wnt receptor
signaling pathway" evidence=IEA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
ZFIN:ZDB-GENE-030131-6320 GO:GO:0005524 GO:GO:0006355 GO:GO:0016055
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 EMBL:AL928674 IPI:IPI00919855
UniGene:Dr.81397 PRIDE:B0R0I6 HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC
Uniprot:B0R0I6
Length = 2511
Score = 356 (130.4 bits), Expect = 8.5e-31, P = 8.5e-31
Identities = 73/146 (50%), Positives = 98/146 (67%)
Query: 16 LHPVTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLN 75
L V + F L++ GKL LD +L +LKAGGH+VLIF+QM R LD+LE +L
Sbjct: 1149 LREVYDPLAPDFHLQALVR-SAGKLVLLDKLLPRLKAGGHKVLIFSQMVRCLDILEDYLI 1207
Query: 76 FHGHIYLRLDGTTKVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSD 134
++Y R+DG + + RQ ++RF+ D+ F F+L TR+GG+GINLT ADT V +DSD
Sbjct: 1208 HKRYLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCVIFDSD 1267
Query: 135 WNPTMDAQAQDRCHRIGQTRDVHIYR 160
WNP D QAQ RCHRIGQ++ V +YR
Sbjct: 1268 WNPQNDLQAQARCHRIGQSKAVKVYR 1293
>ZFIN|ZDB-GENE-041111-187 [details] [associations]
symbol:chd4a "chromodomain helicase DNA binding
protein 4a" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-041111-187
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX004850
IPI:IPI00962864 Ensembl:ENSDART00000005453 ArrayExpress:F1QWV5
Bgee:F1QWV5 Uniprot:F1QWV5
Length = 1930
Score = 354 (129.7 bits), Expect = 9.9e-31, P = 9.9e-31
Identities = 75/124 (60%), Positives = 87/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +LRKLK GGHRVLIF+QMT+MLD+LE FL G+ Y R+DG RQ +
Sbjct: 1034 GKLLLLQKMLRKLKEGGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGITGGMRQEAI 1093
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A F F+LSTR+GG+GINL ADTVV YDSDWNP D QA R HRIGQ + V
Sbjct: 1094 DRFNAPGAPQFVFLLSTRAGGLGINLATADTVVIYDSDWNPHNDIQAFSRAHRIGQNKKV 1153
Query: 157 HIYR 160
IYR
Sbjct: 1154 MIYR 1157
>DICTYBASE|DDB_G0293012 [details] [associations]
symbol:DDB_G0293012 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000626
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00213 SMART:SM00298
SMART:SM00490 dictyBase:DDB_G0293012 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0006357 GO:GO:0004003
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
EMBL:AAFI02000199 InterPro:IPR022617 Pfam:PF11976
RefSeq:XP_629261.1 ProteinModelPortal:Q54CF8
EnsemblProtists:DDB0220643 GeneID:8628981 KEGG:ddi:DDB_G0293012
InParanoid:Q54CF8 OMA:IMINEDI Uniprot:Q54CF8
Length = 3071
Score = 356 (130.4 bits), Expect = 1.1e-30, P = 1.1e-30
Identities = 70/130 (53%), Positives = 93/130 (71%)
Query: 32 LIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVD 91
L+ KL +D +L++LKA GH+VLIF+QM L++LE +L + + Y RLDG+ K +
Sbjct: 1204 LLVKSSSKLVLVDKLLQRLKAEGHQVLIFSQMVESLNILEDYLQYREYTYERLDGSIKSE 1263
Query: 92 QRQVLMERF-NMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRI 150
RQ ++RF + A F F+LSTR+GGVGINLT ADTV+ +DSDWNP D QAQ RCHRI
Sbjct: 1264 VRQASIDRFQDKGANRFVFLLSTRAGGVGINLTTADTVILFDSDWNPQSDLQAQARCHRI 1323
Query: 151 GQTRDVHIYR 160
GQT +V +YR
Sbjct: 1324 GQTNNVKVYR 1333
>UNIPROTKB|F1NSG3 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0008015 "blood circulation" evidence=IEA] [GO:0021545 "cranial
nerve development" evidence=IEA] [GO:0030217 "T cell
differentiation" evidence=IEA] [GO:0030540 "female genitalia
development" evidence=IEA] [GO:0035116 "embryonic hindlimb
morphogenesis" evidence=IEA] [GO:0040018 "positive regulation of
multicellular organism growth" evidence=IEA] [GO:0043584 "nose
development" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0050890 "cognition" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0060041 "retina development
in camera-type eye" evidence=IEA] [GO:0060123 "regulation of growth
hormone secretion" evidence=IEA] [GO:0060324 "face development"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] [GO:0003007 "heart morphogenesis" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0040018 GO:GO:0003682
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 IPI:IPI00590082
OMA:TFGVIFD GO:GO:0060123 GeneTree:ENSGT00560000077077
EMBL:AADN02022009 EMBL:AADN02022010 Ensembl:ENSGALT00000024950
ArrayExpress:F1NSG3 Uniprot:F1NSG3
Length = 2248
Score = 354 (129.7 bits), Expect = 1.2e-30, P = 1.2e-30
Identities = 70/124 (56%), Positives = 90/124 (72%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KLKAGGHRVLIF+QM R LD+LE +L + Y R+DG + + RQ +
Sbjct: 528 GKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAI 587
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 588 DRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSV 647
Query: 157 HIYR 160
IYR
Sbjct: 648 KIYR 651
>MGI|MGI:95453 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1" species:10090 "Mus musculus" [GO:0000018 "regulation
of DNA recombination" evidence=ISS] [GO:0000166 "nucleotide
binding" evidence=IEA] [GO:0000729 "DNA double-strand break
processing" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=ISO] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IDA] [GO:0005694 "chromosome"
evidence=IEA] [GO:0006281 "DNA repair" evidence=IEA] [GO:0006974
"response to DNA damage stimulus" evidence=IEA] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0035861 "site of double-strand break"
evidence=ISO] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO] [GO:0043596 "nuclear replication fork" evidence=ISO]
[GO:0051304 "chromosome separation" evidence=ISO] [GO:0070932
"histone H3 deacetylation" evidence=ISO] [GO:0070933 "histone H4
deacetylation" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 MGI:MGI:95453 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0043596 GO:GO:0004386
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0000792 GO:GO:0070932 GO:GO:0070933
GO:GO:0000729 GO:GO:0000018 HOGENOM:HOG000172362 GO:GO:0035861
KO:K14439 GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
CTD:56916 HOVERGEN:HBG055804 EMBL:X69942 EMBL:AK122454
EMBL:BC042442 EMBL:AK134442 EMBL:AK147884 IPI:IPI00223926
IPI:IPI00556837 PIR:A56559 RefSeq:NP_001240321.1 RefSeq:NP_031984.1
UniGene:Mm.99113 ProteinModelPortal:Q04692 SMR:Q04692 STRING:Q04692
PhosphoSite:Q04692 PaxDb:Q04692 PRIDE:Q04692
Ensembl:ENSMUST00000031984 GeneID:13990 KEGG:mmu:13990
UCSC:uc009ced.1 UCSC:uc012emw.1 InParanoid:Q04692 OrthoDB:EOG4RV2QW
NextBio:284868 Bgee:Q04692 Genevestigator:Q04692
GermOnline:ENSMUSG00000029920 Uniprot:Q04692
Length = 1021
Score = 349 (127.9 bits), Expect = 1.3e-30, P = 1.3e-30
Identities = 65/125 (52%), Positives = 90/125 (72%)
Query: 36 DCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQV 95
D GK ++L IL +LK G RV++F+Q T MLD+LE L H H YLRLDG T++ +R
Sbjct: 847 DSGKFRALGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIH 906
Query: 96 LMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRD 155
L++ FN D IF F+LST++GG+GINLT A+ V+ +D D NP D QA+DRCHR+GQT++
Sbjct: 907 LIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKE 966
Query: 156 VHIYR 160
V + +
Sbjct: 967 VLVIK 971
>RGD|1309640 [details] [associations]
symbol:Smarcad1 "SWI/SNF-related, matrix-associated
actin-dependent regulator of chromatin, subfamily a, containing
DEAD/H box 1`" species:10116 "Rattus norvegicus" [GO:0000018
"regulation of DNA recombination" evidence=IEA;ISO] [GO:0000729
"DNA double-strand break processing" evidence=ISO;ISS] [GO:0000792
"heterochromatin" evidence=ISO;ISS] [GO:0003677 "DNA binding"
evidence=IEA;ISO] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;ISS] [GO:0035861 "site of double-strand break"
evidence=ISO;ISS] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=ISO;ISS] [GO:0043596 "nuclear replication fork"
evidence=IEA;ISO] [GO:0051304 "chromosome separation"
evidence=ISO;ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISO;ISS] [GO:0070933 "histone H4 deacetylation"
evidence=ISO;ISS] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 RGD:1309640 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000729 GO:GO:0000018 GO:GO:0035861 KO:K14439
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ CTD:56916
OrthoDB:EOG4RV2QW EMBL:AABR03032021 IPI:IPI00765483
RefSeq:NP_001101334.2 UniGene:Rn.7758 ProteinModelPortal:D3Z9Z9
Ensembl:ENSRNOT00000008585 GeneID:312398 KEGG:rno:312398
UCSC:RGD:1309640 Uniprot:D3Z9Z9
Length = 1024
Score = 349 (127.9 bits), Expect = 1.3e-30, P = 1.3e-30
Identities = 65/125 (52%), Positives = 90/125 (72%)
Query: 36 DCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQV 95
D GK ++L IL +LK G RV++F+Q T MLD+LE L H H YLRLDG T++ +R
Sbjct: 850 DSGKFRTLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIH 909
Query: 96 LMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRD 155
L++ FN D IF F+LST++GG+GINLT A+ V+ +D D NP D QA+DRCHR+GQT++
Sbjct: 910 LIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKE 969
Query: 156 VHIYR 160
V + +
Sbjct: 970 VLVIK 974
>RGD|1311921 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10116 "Rattus norvegicus" [GO:0001501 "skeletal system
development" evidence=IEA;ISO] [GO:0001568 "blood vessel
development" evidence=ISO] [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0003007 "heart morphogenesis"
evidence=IEA;ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA;ISO] [GO:0007417 "central
nervous system development" evidence=IEA;ISO] [GO:0007512 "adult
heart development" evidence=IEA;ISO] [GO:0007605 "sensory
perception of sound" evidence=IEA;ISO] [GO:0007626 "locomotory
behavior" evidence=ISO] [GO:0007628 "adult walking behavior"
evidence=IEA;ISO] [GO:0008015 "blood circulation" evidence=IEA;ISO]
[GO:0021545 "cranial nerve development" evidence=IEA;ISO]
[GO:0030217 "T cell differentiation" evidence=IEA;ISO] [GO:0030540
"female genitalia development" evidence=IEA;ISO] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA;ISO] [GO:0040018
"positive regulation of multicellular organism growth"
evidence=IEA;ISO] [GO:0042471 "ear morphogenesis" evidence=ISO]
[GO:0042472 "inner ear morphogenesis" evidence=ISO] [GO:0043010
"camera-type eye development" evidence=ISO] [GO:0043584 "nose
development" evidence=IEA;ISO] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA;ISO] [GO:0048806 "genitalia
development" evidence=ISO] [GO:0048844 "artery morphogenesis"
evidence=IEA;ISO] [GO:0050890 "cognition" evidence=IEA;ISO]
[GO:0060021 "palate development" evidence=IEA;ISO] [GO:0060041
"retina development in camera-type eye" evidence=IEA;ISO]
[GO:0060123 "regulation of growth hormone secretion"
evidence=IEA;ISO] [GO:0060173 "limb development" evidence=ISO]
[GO:0060324 "face development" evidence=IEA;ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 RGD:1311921 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0008015 GO:GO:0003007
GO:GO:0050890 GO:GO:0001701 GO:GO:0040018 GO:GO:0007417
GO:GO:0003682 GO:GO:0001501 GO:GO:0060041 GO:GO:0007605
GO:GO:0007512 GO:GO:0004386 GO:GO:0035116 GO:GO:0060324
GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0030540
GO:GO:0007628 GO:GO:0030217 GO:GO:0048752 InterPro:IPR023780
CTD:55636 KO:K14437 OrthoDB:EOG4MCWZD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 IPI:IPI00366595
RefSeq:XP_003749947.1 PRIDE:D3ZAP7 Ensembl:ENSRNOT00000008901
GeneID:312974 KEGG:rno:312974 UCSC:RGD:1311921 Uniprot:D3ZAP7
Length = 2985
Score = 355 (130.0 bits), Expect = 1.3e-30, P = 1.3e-30
Identities = 77/151 (50%), Positives = 100/151 (66%)
Query: 14 RLLHPVTSAMCTQFPDPRL---IQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVL 70
++L A PD +L IQ GKL +D +L KLKAGGHRVLIF+QM R LD+L
Sbjct: 1253 KILEEFKDAHNADSPDFQLQAMIQA-AGKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDIL 1311
Query: 71 EAFLNFHGHIYLRLDGTTKVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVV 129
E +L + Y R+DG + + RQ ++RF+ D+ F F+L TR+GG+GINLT ADT +
Sbjct: 1312 EDYLIQRRYPYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCI 1371
Query: 130 FYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
+DSDWNP D QAQ RCHRIGQ++ V IYR
Sbjct: 1372 IFDSDWNPQNDLQAQARCHRIGQSKSVKIYR 1402
>UNIPROTKB|K7GNV1 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 EMBL:CU695129
GeneID:100188905 RefSeq:XP_003360492.1 Ensembl:ENSSSCT00000032734
Uniprot:K7GNV1
Length = 1061
Score = 349 (127.9 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 68/133 (51%), Positives = 94/133 (70%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D ++ + GK+ LD +L KLK G RVLIF+QMTR+LD+LE + + G+ Y RLDG T
Sbjct: 481 DEHIVS-NSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQT 539
Query: 89 KVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRC 147
++R+ +E FN+ ++ F F+LSTR+GG+GINL AD V+ YDSDWNP +D QA DR
Sbjct: 540 PHEEREEAIEAFNVPNSSRFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRA 599
Query: 148 HRIGQTRDVHIYR 160
HRIGQ + V ++R
Sbjct: 600 HRIGQKKPVRVFR 612
>TAIR|locus:2182978 [details] [associations]
symbol:CHR17 "chromatin remodeling factor17" species:3702
"Arabidopsis thaliana" [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISS]
[GO:0005829 "cytosol" evidence=RCA] [GO:0000226 "microtubule
cytoskeleton organization" evidence=RCA] [GO:0000911 "cytokinesis
by cell plate formation" evidence=RCA] [GO:0006259 "DNA metabolic
process" evidence=RCA] [GO:0006261 "DNA-dependent DNA replication"
evidence=RCA] [GO:0006306 "DNA methylation" evidence=RCA]
[GO:0006342 "chromatin silencing" evidence=RCA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0007126 "meiosis" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=RCA] [GO:0010413 "glucuronoxylan metabolic
process" evidence=RCA] [GO:0016246 "RNA interference" evidence=RCA]
[GO:0016572 "histone phosphorylation" evidence=RCA] [GO:0031047
"gene silencing by RNA" evidence=RCA] [GO:0033044 "regulation of
chromosome organization" evidence=RCA] [GO:0045492 "xylan
biosynthetic process" evidence=RCA] [GO:0051567 "histone H3-K9
methylation" evidence=RCA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=IGI] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CP002688 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 GO:GO:0010228 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 KO:K11654 OMA:MQRKWYK SUPFAM:SSF101224
IPI:IPI00547773 RefSeq:NP_850847.1 UniGene:At.19176
ProteinModelPortal:F4JY25 SMR:F4JY25 IntAct:F4JY25 PRIDE:F4JY25
EnsemblPlants:AT5G18620.2 GeneID:831980 KEGG:ath:AT5G18620
PhylomeDB:F4JY25 Uniprot:F4JY25
Length = 1072
Score = 349 (127.9 bits), Expect = 1.4e-30, P = 1.4e-30
Identities = 67/126 (53%), Positives = 90/126 (71%)
Query: 36 DCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQV 95
+ GK+ LD +L KLK RVLIF+QMTR+LD+LE +L + G+ Y R+DG T D+R
Sbjct: 493 NAGKMVLLDKLLPKLKDRDSRVLIFSQMTRLLDILEDYLMYRGYQYCRIDGNTGGDERDA 552
Query: 96 LMERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTR 154
+E +N + F F+LSTR+GG+GINL AD V+ YDSDWNP +D QAQDR HRIGQ +
Sbjct: 553 SIEAYNKPGSEKFVFLLSTRAGGLGINLATADVVILYDSDWNPQVDLQAQDRAHRIGQKK 612
Query: 155 DVHIYR 160
+V ++R
Sbjct: 613 EVQVFR 618
>UNIPROTKB|B5DE69 [details] [associations]
symbol:chd8 "Chromodomain-helicase-DNA-binding protein 8"
species:8364 "Xenopus (Silurana) tropicalis" [GO:0005634 "nucleus"
evidence=ISS] [GO:0071339 "MLL1 complex" evidence=ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0006355 GO:GO:0016055 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG107676 CTD:57680
KO:K04494 EMBL:BC168549 RefSeq:NP_001131089.2 UniGene:Str.42730
GeneID:100192376 KEGG:xtr:100192376 Xenbase:XB-GENE-966847
Uniprot:B5DE69
Length = 2184
Score = 353 (129.3 bits), Expect = 1.5e-30, P = 1.5e-30
Identities = 68/124 (54%), Positives = 91/124 (73%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KL+AGGH+VLIF+QM R LD+LE +L ++Y R+DG + + RQ +
Sbjct: 1077 GKLVLIDKLLPKLRAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNMRQAAI 1136
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 1137 DRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 1196
Query: 157 HIYR 160
IYR
Sbjct: 1197 KIYR 1200
>UNIPROTKB|F1S594 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 GO:GO:0005524 GO:GO:0003677 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000014884 OMA:KSSGHER Uniprot:F1S594
Length = 866
Score = 347 (127.2 bits), Expect = 1.5e-30, P = 1.5e-30
Identities = 65/124 (52%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A H+VL+F QMT ++ ++E + + G YLRLDGTTK + R +L+
Sbjct: 332 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 391
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ +V
Sbjct: 392 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 451
Query: 157 HIYR 160
+ R
Sbjct: 452 RVLR 455
>UNIPROTKB|E2QUR1 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AAEX03009852
Ensembl:ENSCAFT00000009072 Uniprot:E2QUR1
Length = 2200
Score = 353 (129.3 bits), Expect = 1.5e-30, P = 1.5e-30
Identities = 68/124 (54%), Positives = 91/124 (73%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KLKAGGH+VLIF+QM R LD+LE +L ++Y R+DG + + RQ +
Sbjct: 750 GKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAI 809
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 810 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 869
Query: 157 HIYR 160
+YR
Sbjct: 870 KVYR 873
>TAIR|locus:2062840 [details] [associations]
symbol:SYD "SPLAYED" species:3702 "Arabidopsis thaliana"
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISM;IDA] [GO:0009908 "flower development"
evidence=IMP] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=IPI] [GO:0010199 "organ
boundary specification between lateral organs and the meristem"
evidence=IGI] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=NAS] [GO:0040029 "regulation of gene expression,
epigenetic" evidence=RCA;IMP] [GO:0009611 "response to wounding"
evidence=IEP] [GO:0005829 "cytosol" evidence=IDA] [GO:0000226
"microtubule cytoskeleton organization" evidence=RCA] [GO:0000911
"cytokinesis by cell plate formation" evidence=RCA] [GO:0006306
"DNA methylation" evidence=RCA] [GO:0006342 "chromatin silencing"
evidence=RCA] [GO:0007267 "cell-cell signaling" evidence=RCA]
[GO:0009616 "virus induced gene silencing" evidence=RCA]
[GO:0009640 "photomorphogenesis" evidence=RCA] [GO:0009793 "embryo
development ending in seed dormancy" evidence=RCA] [GO:0009845
"seed germination" evidence=RCA] [GO:0009909 "regulation of flower
development" evidence=RCA] [GO:0009933 "meristem structural
organization" evidence=RCA] [GO:0010162 "seed dormancy process"
evidence=RCA] [GO:0010182 "sugar mediated signaling pathway"
evidence=RCA] [GO:0010228 "vegetative to reproductive phase
transition of meristem" evidence=RCA] [GO:0010267 "production of
ta-siRNAs involved in RNA interference" evidence=RCA] [GO:0016567
"protein ubiquitination" evidence=RCA] [GO:0019915 "lipid storage"
evidence=RCA] [GO:0035196 "production of miRNAs involved in gene
silencing by miRNA" evidence=RCA] [GO:0050826 "response to
freezing" evidence=RCA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 SMART:SM00951 GO:GO:0005829 GO:GO:0005524
GO:GO:0005634 EMBL:CP002685 GO:GO:0009611 GO:GO:0006355
GO:GO:0003677 GO:GO:0003682 GO:GO:0016887 GO:GO:0004386
GO:GO:0009908 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0043044 GO:GO:0010199 GO:GO:0040029 InterPro:IPR014012
PROSITE:PS51204 IPI:IPI00516285 RefSeq:NP_850116.1 UniGene:At.22414
PRIDE:F4IHS2 EnsemblPlants:AT2G28290.1 GeneID:817375
KEGG:ath:AT2G28290 OMA:SDLYAIS Uniprot:F4IHS2
Length = 3574
Score = 355 (130.0 bits), Expect = 1.6e-30, P = 1.6e-30
Identities = 76/153 (49%), Positives = 99/153 (64%)
Query: 11 PKLRLLHP--VTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLD 68
P L LH V + + F P +++ CGKL+ LD +L KLKA HRVL F+ MTR+LD
Sbjct: 1046 PYLSQLHSEEVNNIIPKHFLPP-IVRL-CGKLEMLDRMLPKLKATDHRVLFFSTMTRLLD 1103
Query: 69 VLEAFLNFHGHIYLRLDGTTKVDQRQVLMERFNMDAR-IFCFILSTRSGGVGINLTGADT 127
V+E +L G+ YLRLDG T R L++ FN F F+LS R+GGVG+NL ADT
Sbjct: 1104 VMEDYLTLKGYKYLRLDGQTSGGDRGALIDGFNKSGSPFFIFLLSIRAGGVGVNLQAADT 1163
Query: 128 VVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
V+ +D+DWNP +D QAQ R HRIGQ +DV + R
Sbjct: 1164 VILFDTDWNPQVDLQAQARAHRIGQKKDVLVLR 1196
>UNIPROTKB|E1BPM4 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:DAAA02038386
EMBL:DAAA02038387 EMBL:DAAA02038388 IPI:IPI00697020
Ensembl:ENSBTAT00000026607 Uniprot:E1BPM4
Length = 2940
Score = 354 (129.7 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 70/124 (56%), Positives = 90/124 (72%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KLKAGGHRVLIF+QM R LD+LE +L + Y R+DG + + RQ +
Sbjct: 1240 GKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAI 1299
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 1300 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSV 1359
Query: 157 HIYR 160
IYR
Sbjct: 1360 KIYR 1363
>ZFIN|ZDB-GENE-030131-497 [details] [associations]
symbol:chd9 "chromodomain helicase DNA binding
protein 9" species:7955 "Danio rerio" [GO:0016817 "hydrolase
activity, acting on acid anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 ZFIN:ZDB-GENE-030131-497
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 GeneTree:ENSGT00560000077077
EMBL:CR318585 EMBL:CU464124 EMBL:FP015866 IPI:IPI00972236
Ensembl:ENSDART00000027807 Bgee:E7F7W5 Uniprot:E7F7W5
Length = 2948
Score = 354 (129.7 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 72/143 (50%), Positives = 96/143 (67%)
Query: 19 VTSAMCTQFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHG 78
V S F +IQ GKL +D +L K+KAGGH+VLIF+QM R LD+LE +L
Sbjct: 1217 VYSPAAVDFHLQAMIQ-SAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIQRR 1275
Query: 79 HIYLRLDGTTKVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNP 137
++Y R+DG + + RQ ++RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP
Sbjct: 1276 YLYERIDGRVRGNLRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNP 1335
Query: 138 TMDAQAQDRCHRIGQTRDVHIYR 160
D QAQ RCHRIGQ + V +YR
Sbjct: 1336 QNDLQAQARCHRIGQNKAVKVYR 1358
>MGI|MGI:2444748 [details] [associations]
symbol:Chd7 "chromodomain helicase DNA binding protein 7"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001501 "skeletal system development"
evidence=ISO] [GO:0001568 "blood vessel development" evidence=IMP]
[GO:0001701 "in utero embryonic development" evidence=ISO;IMP]
[GO:0003007 "heart morphogenesis" evidence=ISO;IMP] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0007417 "central
nervous system development" evidence=ISO] [GO:0007512 "adult heart
development" evidence=IMP] [GO:0007605 "sensory perception of
sound" evidence=IMP] [GO:0007626 "locomotory behavior"
evidence=IMP] [GO:0007628 "adult walking behavior" evidence=IMP]
[GO:0008015 "blood circulation" evidence=IMP] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] [GO:0021545 "cranial nerve
development" evidence=ISO] [GO:0030217 "T cell differentiation"
evidence=ISO] [GO:0030540 "female genitalia development"
evidence=IMP] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IMP] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IMP] [GO:0042471 "ear morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis"
evidence=ISO;IMP] [GO:0043010 "camera-type eye development"
evidence=IMP] [GO:0043584 "nose development" evidence=ISO;IMP]
[GO:0048752 "semicircular canal morphogenesis" evidence=IGI]
[GO:0048806 "genitalia development" evidence=ISO] [GO:0048844
"artery morphogenesis" evidence=IGI] [GO:0050890 "cognition"
evidence=ISO] [GO:0060021 "palate development" evidence=ISO;IMP]
[GO:0060041 "retina development in camera-type eye" evidence=ISO]
[GO:0060123 "regulation of growth hormone secretion" evidence=ISO]
[GO:0060173 "limb development" evidence=ISO] [GO:0060324 "face
development" evidence=ISO] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 MGI:MGI:2444748 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0003677
GO:GO:0008015 GO:GO:0003007 GO:GO:0050890 GO:GO:0001701
GO:GO:0040018 GO:GO:0007417 GO:GO:0006351 GO:GO:0003682
GO:GO:0016568 GO:GO:0043010 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0030540 GO:GO:0007628 GO:GO:0030217
GO:GO:0048752 InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
CTD:55636 HOGENOM:HOG000246942 KO:K14437 OrthoDB:EOG4MCWZD
OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584 GO:GO:0060123 EMBL:AK042727
EMBL:AK171051 EMBL:AK171857 EMBL:AK172025 EMBL:AL732627
EMBL:AL805903 EMBL:BC034239 IPI:IPI00345676 IPI:IPI00666779
IPI:IPI00849588 RefSeq:NP_001074886.1 UniGene:Mm.138792
ProteinModelPortal:A2AJK6 SMR:A2AJK6 IntAct:A2AJK6 STRING:A2AJK6
PhosphoSite:A2AJK6 PaxDb:A2AJK6 PRIDE:A2AJK6
Ensembl:ENSMUST00000039267 Ensembl:ENSMUST00000051558
Ensembl:ENSMUST00000127476 GeneID:320790 KEGG:mmu:320790
UCSC:uc008rxy.1 UCSC:uc008rya.1 GeneTree:ENSGT00560000077077
InParanoid:A2AJK6 NextBio:397435 Bgee:A2AJK6 CleanEx:MM_CHD7
Genevestigator:A2AJK6 Uniprot:A2AJK6
Length = 2986
Score = 354 (129.7 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 70/124 (56%), Positives = 90/124 (72%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KLKAGGHRVLIF+QM R LD+LE +L + Y R+DG + + RQ +
Sbjct: 1280 GKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAI 1339
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 1340 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSV 1399
Query: 157 HIYR 160
IYR
Sbjct: 1400 KIYR 1403
>UNIPROTKB|F1PWD8 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 SMART:SM00717 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 OMA:TFGVIFD EMBL:AAEX03015818
EMBL:AAEX03015819 EMBL:AAEX03015820 Ensembl:ENSCAFT00000011497
GeneTree:ENSGT00700000105087 Uniprot:F1PWD8
Length = 2994
Score = 354 (129.7 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 70/124 (56%), Positives = 90/124 (72%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KLKAGGHRVLIF+QM R LD+LE +L + Y R+DG + + RQ +
Sbjct: 1289 GKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAI 1348
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 1349 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSV 1408
Query: 157 HIYR 160
IYR
Sbjct: 1409 KIYR 1412
>UNIPROTKB|Q9P2D1 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0007512 "adult heart development" evidence=IEA] [GO:0007605
"sensory perception of sound" evidence=IEA] [GO:0007628 "adult
walking behavior" evidence=IEA] [GO:0008015 "blood circulation"
evidence=IEA] [GO:0030540 "female genitalia development"
evidence=IEA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=IEA] [GO:0040018 "positive regulation of multicellular
organism growth" evidence=IEA] [GO:0048752 "semicircular canal
morphogenesis" evidence=IEA] [GO:0048844 "artery morphogenesis"
evidence=IEA] [GO:0005634 "nucleus" evidence=IDA;TAS] [GO:0005515
"protein binding" evidence=IPI] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0003007 "heart morphogenesis"
evidence=IMP] [GO:0042472 "inner ear morphogenesis" evidence=IMP]
[GO:0043584 "nose development" evidence=IMP] [GO:0048806 "genitalia
development" evidence=IMP] [GO:0060021 "palate development"
evidence=IMP] [GO:0060041 "retina development in camera-type eye"
evidence=IMP] [GO:0001501 "skeletal system development"
evidence=IMP] [GO:0050890 "cognition" evidence=IMP] [GO:0007417
"central nervous system development" evidence=IMP] [GO:0021545
"cranial nerve development" evidence=IMP] [GO:0060123 "regulation
of growth hormone secretion" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=TAS] [GO:0030217 "T cell differentiation"
evidence=IMP] [GO:0060173 "limb development" evidence=IMP]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0060324 "face development" evidence=IMP]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0008015 GO:GO:0003007 GO:GO:0050890
GO:GO:0001701 GO:GO:0040018 GO:GO:0007417 GO:GO:0006351
GO:GO:0003682 GO:GO:0016568 GO:GO:0048806 GO:GO:0042472
GO:GO:0001501 GO:GO:0060041 GO:GO:0007605 GO:GO:0007512
GO:GO:0004386 GO:GO:0035116 GO:GO:0060324 GO:GO:0060021
GO:GO:0060173 GO:GO:0048844 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150 CTD:55636
KO:K14437 OrthoDB:EOG4MCWZD EMBL:AC023102 EMBL:AC113143
EMBL:AB037837 EMBL:AK000364 EMBL:AK000368 EMBL:BC014681
EMBL:BC051264 EMBL:BC053890 EMBL:BC068000 EMBL:BC080627
EMBL:BC110818 IPI:IPI00472901 IPI:IPI00794880 RefSeq:NP_060250.2
UniGene:Hs.20395 UniGene:Hs.733236 PDB:2CKC PDB:2V0E PDB:2V0F
PDBsum:2CKC PDBsum:2V0E PDBsum:2V0F ProteinModelPortal:Q9P2D1
SMR:Q9P2D1 DIP:DIP-48685N IntAct:Q9P2D1 STRING:Q9P2D1
PhosphoSite:Q9P2D1 DMDM:148877246 PaxDb:Q9P2D1 PRIDE:Q9P2D1
Ensembl:ENST00000307121 Ensembl:ENST00000423902
Ensembl:ENST00000525508 GeneID:55636 KEGG:hsa:55636 UCSC:uc003xue.3
GeneCards:GC08P061642 H-InvDB:HIX0007533 HGNC:HGNC:20626 MIM:214800
MIM:608765 MIM:608892 MIM:612370 neXtProt:NX_Q9P2D1 Orphanet:138
Orphanet:478 Orphanet:432 PharmGKB:PA134948695 InParanoid:Q9P2D1
OMA:TFGVIFD EvolutionaryTrace:Q9P2D1 GenomeRNAi:55636 NextBio:60291
ArrayExpress:Q9P2D1 Bgee:Q9P2D1 CleanEx:HS_CHD7
Genevestigator:Q9P2D1 GermOnline:ENSG00000171316 GO:GO:0021545
GO:GO:0043584 GO:GO:0060123 Uniprot:Q9P2D1
Length = 2997
Score = 354 (129.7 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 70/124 (56%), Positives = 90/124 (72%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KLKAGGHRVLIF+QM R LD+LE +L + Y R+DG + + RQ +
Sbjct: 1290 GKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAI 1349
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 1350 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSV 1409
Query: 157 HIYR 160
IYR
Sbjct: 1410 KIYR 1413
>UNIPROTKB|Q06A37 [details] [associations]
symbol:CHD7 "Chromodomain-helicase-DNA-binding protein 7"
species:9031 "Gallus gallus" [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 SMART:SM00717
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:DQ978381 IPI:IPI00590082
RefSeq:NP_001071054.1 UniGene:Gga.20865 ProteinModelPortal:Q06A37
SMR:Q06A37 GeneID:421140 KEGG:gga:421140 CTD:55636
HOGENOM:HOG000246942 InParanoid:Q06A37 KO:K14437 OrthoDB:EOG4MCWZD
NextBio:20823957 Uniprot:Q06A37
Length = 3011
Score = 354 (129.7 bits), Expect = 1.7e-30, P = 1.7e-30
Identities = 70/124 (56%), Positives = 90/124 (72%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KLKAGGHRVLIF+QM R LD+LE +L + Y R+DG + + RQ +
Sbjct: 1291 GKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAI 1350
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 1351 DRFSRPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKSV 1410
Query: 157 HIYR 160
IYR
Sbjct: 1411 KIYR 1414
>UNIPROTKB|F1MLB2 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:DAAA02028315 EMBL:DAAA02028312 EMBL:DAAA02028313
EMBL:DAAA02028314 IPI:IPI01017729 Ensembl:ENSBTAT00000027215
Uniprot:F1MLB2
Length = 2537
Score = 353 (129.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 68/124 (54%), Positives = 91/124 (73%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KLKAGGH+VLIF+QM R LD+LE +L ++Y R+DG + + RQ +
Sbjct: 1087 GKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAI 1146
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 1147 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 1206
Query: 157 HIYR 160
+YR
Sbjct: 1207 KVYR 1210
>UNIPROTKB|F1S8J5 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0071339 "MLL1 complex" evidence=IEA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IEA]
[GO:0045945 "positive regulation of transcription from RNA
polymerase III promoter" evidence=IEA] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=IEA] [GO:0030178 "negative regulation of
Wnt receptor signaling pathway" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003678 "DNA helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0002039 "p53 binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 GO:GO:0008094 GeneTree:ENSGT00560000077077
OMA:FLAYMED EMBL:FP340603 Ensembl:ENSSSCT00000002379
ArrayExpress:F1S8J5 Uniprot:F1S8J5
Length = 2569
Score = 353 (129.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 68/124 (54%), Positives = 91/124 (73%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KLKAGGH+VLIF+QM R LD+LE +L ++Y R+DG + + RQ +
Sbjct: 1134 GKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAI 1193
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 1194 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 1253
Query: 157 HIYR 160
+YR
Sbjct: 1254 KVYR 1257
>UNIPROTKB|Q9HCK8 [details] [associations]
symbol:CHD8 "Chromodomain-helicase-DNA-binding protein 8"
species:9606 "Homo sapiens" [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0001701 "in utero embryonic
development" evidence=IEA] [GO:0043066 "negative regulation of
apoptotic process" evidence=IEA] [GO:0070016 "armadillo repeat
domain binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IMP] [GO:0005634 "nucleus" evidence=IDA] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=IDA]
[GO:0030178 "negative regulation of Wnt receptor signaling pathway"
evidence=IDA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IDA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0003678 "DNA helicase activity" evidence=IMP] [GO:0035064
"methylated histone residue binding" evidence=IDA] [GO:0045945
"positive regulation of transcription from RNA polymerase III
promoter" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IMP]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=IMP] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IDA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IMP] [GO:0043234 "protein complex" evidence=IDA]
[GO:0002039 "p53 binding" evidence=ISS] [GO:0008013 "beta-catenin
binding" evidence=IDA] [GO:0071339 "MLL1 complex" evidence=IDA]
[GO:0042393 "histone binding" evidence=ISS] [GO:0032508 "DNA duplex
unwinding" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00592 Pfam:PF00385
GO:GO:0005524 GO:GO:0045892 GO:GO:0043066 GO:GO:0003677
GO:GO:0001701 GO:GO:0045944 GO:GO:0006351 GO:GO:0035064
GO:GO:0008013 GO:GO:0045945 GO:GO:0030178 GO:GO:0060070
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0043044 GO:GO:0071339 GO:GO:0002039 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0008094 HOVERGEN:HBG107676 EMBL:CR749315
EMBL:AL834524 EMBL:AL135744 EMBL:AL161747 EMBL:CB043942
EMBL:AB046784 EMBL:AK131077 EMBL:BC011695 EMBL:BC025964
EMBL:BC036920 EMBL:BC063693 EMBL:BC073903 EMBL:BC098452
IPI:IPI00398992 IPI:IPI00719073 RefSeq:NP_001164100.1
RefSeq:NP_065971.2 UniGene:Hs.530698 PDB:2CKA PDB:2DL6 PDBsum:2CKA
PDBsum:2DL6 ProteinModelPortal:Q9HCK8 SMR:Q9HCK8 IntAct:Q9HCK8
STRING:Q9HCK8 PhosphoSite:Q9HCK8 DMDM:226706293 PaxDb:Q9HCK8
PRIDE:Q9HCK8 Ensembl:ENST00000399982 Ensembl:ENST00000430710
Ensembl:ENST00000557364 GeneID:57680 KEGG:hsa:57680 UCSC:uc001war.2
UCSC:uc001was.2 CTD:57680 GeneCards:GC14M021853 HGNC:HGNC:20153
HPA:HPA000849 MIM:610528 neXtProt:NX_Q9HCK8 PharmGKB:PA134957052
KO:K04494 OMA:FLAYMED EvolutionaryTrace:Q9HCK8 GenomeRNAi:57680
NextBio:64494 ArrayExpress:Q9HCK8 Bgee:Q9HCK8 CleanEx:HS_CHD8
Genevestigator:Q9HCK8 GermOnline:ENSG00000100888 Uniprot:Q9HCK8
Length = 2581
Score = 353 (129.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 68/124 (54%), Positives = 91/124 (73%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KLKAGGH+VLIF+QM R LD+LE +L ++Y R+DG + + RQ +
Sbjct: 1133 GKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAI 1192
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 1193 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 1252
Query: 157 HIYR 160
+YR
Sbjct: 1253 KVYR 1256
>RGD|620696 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10116 "Rattus norvegicus" [GO:0001701 "in utero embryonic
development" evidence=IEA;ISO] [GO:0002039 "p53 binding"
evidence=ISO;ISS] [GO:0003677 "DNA binding" evidence=ISO;ISS]
[GO:0003678 "DNA helicase activity" evidence=ISO;ISS] [GO:0005515
"protein binding" evidence=IPI] [GO:0005524 "ATP binding"
evidence=ISO;ISS] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0008013 "beta-catenin binding" evidence=ISO;IDA] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISO;ISS] [GO:0030178
"negative regulation of Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0032508 "DNA duplex unwinding" evidence=ISO]
[GO:0035064 "methylated histone residue binding" evidence=ISO;ISS]
[GO:0042393 "histone binding" evidence=ISO;ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO;ISS] [GO:0043066
"negative regulation of apoptotic process" evidence=ISO;ISS]
[GO:0043234 "protein complex" evidence=ISO;IDA] [GO:0045892
"negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO;ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=ISO;ISS] [GO:0045945 "positive regulation of
transcription from RNA polymerase III promoter" evidence=ISO;ISS]
[GO:0060070 "canonical Wnt receptor signaling pathway"
evidence=ISO;IDA] [GO:0070016 "armadillo repeat domain binding"
evidence=IPI] [GO:0071339 "MLL1 complex" evidence=ISO;ISS]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:620696 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
GO:GO:0002039 EMBL:CH474040 InterPro:IPR023780 PROSITE:PS00598
GO:GO:0008094 HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
EMBL:AF169825 IPI:IPI00201110 IPI:IPI00923717 RefSeq:NP_075222.2
UniGene:Rn.98337 STRING:Q9JIX5 PhosphoSite:Q9JIX5 PRIDE:Q9JIX5
Ensembl:ENSRNOT00000022593 GeneID:65027 KEGG:rno:65027
UCSC:RGD:620696 NextBio:613802 Genevestigator:Q9JIX5 Uniprot:Q9JIX5
Length = 2581
Score = 353 (129.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 68/124 (54%), Positives = 91/124 (73%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KLKAGGH+VLIF+QM R LD+LE +L ++Y R+DG + + RQ +
Sbjct: 1133 GKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAI 1192
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 1193 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 1252
Query: 157 HIYR 160
+YR
Sbjct: 1253 KVYR 1256
>MGI|MGI:1915022 [details] [associations]
symbol:Chd8 "chromodomain helicase DNA binding protein 8"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0001701 "in utero embryonic development"
evidence=IMP] [GO:0002039 "p53 binding" evidence=IPI] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=ISO;IDA] [GO:0003678 "DNA helicase activity" evidence=ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005515 "protein
binding" evidence=IPI] [GO:0005524 "ATP binding" evidence=ISO]
[GO:0005634 "nucleus" evidence=ISO;IDA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008013
"beta-catenin binding" evidence=ISO] [GO:0008094 "DNA-dependent
ATPase activity" evidence=ISO] [GO:0016055 "Wnt receptor signaling
pathway" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
[GO:0016817 "hydrolase activity, acting on acid anhydrides"
evidence=IEA] [GO:0030178 "negative regulation of Wnt receptor
signaling pathway" evidence=ISO] [GO:0032508 "DNA duplex unwinding"
evidence=ISO] [GO:0035064 "methylated histone residue binding"
evidence=ISO] [GO:0042393 "histone binding" evidence=IDA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISO]
[GO:0043066 "negative regulation of apoptotic process"
evidence=IMP;IDA] [GO:0043234 "protein complex" evidence=ISO]
[GO:0045892 "negative regulation of transcription, DNA-dependent"
evidence=ISO;IDA] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045944 "positive
regulation of transcription from RNA polymerase II promoter"
evidence=ISO] [GO:0045945 "positive regulation of transcription
from RNA polymerase III promoter" evidence=ISO] [GO:0060070
"canonical Wnt receptor signaling pathway" evidence=ISO]
[GO:0070016 "armadillo repeat domain binding" evidence=ISO]
[GO:0071339 "MLL1 complex" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 MGI:MGI:1915022 Pfam:PF00385 GO:GO:0005524
GO:GO:0045892 GO:GO:0043066 GO:GO:0003677 GO:GO:0001701
GO:GO:0045944 GO:GO:0006351 GO:GO:0035064 GO:GO:0008013
GO:GO:0045945 GO:GO:0030178 GO:GO:0060070 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0043044 GO:GO:0071339
InterPro:IPR023780 PROSITE:PS00598 GO:GO:0008094
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077
HOVERGEN:HBG107676 OrthoDB:EOG4ZPDTC CTD:57680 KO:K04494
OMA:FLAYMED EMBL:DQ190419 EMBL:AY863219 EMBL:AK129393 EMBL:AK160299
IPI:IPI00858099 IPI:IPI00923681 RefSeq:NP_963999.2
UniGene:Mm.289934 ProteinModelPortal:Q09XV5 SMR:Q09XV5
IntAct:Q09XV5 STRING:Q09XV5 PhosphoSite:Q09XV5 PaxDb:Q09XV5
PRIDE:Q09XV5 Ensembl:ENSMUST00000089752 GeneID:67772 KEGG:mmu:67772
UCSC:uc007tot.1 UCSC:uc007tov.1 InParanoid:Q09XV5 ChiTaRS:CHD8
NextBio:325525 Bgee:Q09XV5 Genevestigator:Q09XV5 Uniprot:Q09XV5
Length = 2582
Score = 353 (129.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 68/124 (54%), Positives = 91/124 (73%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KLKAGGH+VLIF+QM R LD+LE +L ++Y R+DG + + RQ +
Sbjct: 1135 GKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAI 1194
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 1195 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 1254
Query: 157 HIYR 160
+YR
Sbjct: 1255 KVYR 1258
>UNIPROTKB|E2QUS7 [details] [associations]
symbol:CHD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:FLAYMED EMBL:AAEX03009852
Ensembl:ENSCAFT00000009065 Uniprot:E2QUS7
Length = 2586
Score = 353 (129.3 bits), Expect = 1.8e-30, P = 1.8e-30
Identities = 68/124 (54%), Positives = 91/124 (73%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KLKAGGH+VLIF+QM R LD+LE +L ++Y R+DG + + RQ +
Sbjct: 1134 GKLVLIDKLLPKLKAGGHKVLIFSQMVRCLDILEDYLIQRRYLYERIDGRVRGNLRQAAI 1193
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 1194 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 1253
Query: 157 HIYR 160
+YR
Sbjct: 1254 KVYR 1257
>UNIPROTKB|K7GT64 [details] [associations]
symbol:LOC100622433 "Uncharacterized protein" species:9823
"Sus scrofa" [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GeneTree:ENSGT00550000074659 EMBL:FP102365
Ensembl:ENSSSCT00000034320 Uniprot:K7GT64
Length = 980
Score = 347 (127.2 bits), Expect = 1.9e-30, P = 1.9e-30
Identities = 65/124 (52%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A H+VL+F QMT ++ ++E + + G YLRLDGTTK + R +L+
Sbjct: 413 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 472
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ +V
Sbjct: 473 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 532
Query: 157 HIYR 160
+ R
Sbjct: 533 RVLR 536
>RGD|1594200 [details] [associations]
symbol:LOC680231 "similar to chromodomain helicase DNA binding
protein 9" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 RGD:1594200 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 OrthoDB:EOG4548XQ IPI:IPI00957597
Ensembl:ENSRNOT00000018201 Uniprot:D3ZVE2
Length = 2881
Score = 353 (129.3 bits), Expect = 2.1e-30, P = 2.1e-30
Identities = 69/130 (53%), Positives = 93/130 (71%)
Query: 32 LIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVD 91
+IQ GKL +D +L K+KAGGH+VLIF+QM R LD+LE +L ++Y R+DG + +
Sbjct: 1176 MIQ-SAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGN 1234
Query: 92 QRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRI 150
RQ ++RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRI
Sbjct: 1235 LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 1294
Query: 151 GQTRDVHIYR 160
GQ + V +YR
Sbjct: 1295 GQNKAVKVYR 1304
>MGI|MGI:1924001 [details] [associations]
symbol:Chd9 "chromodomain helicase DNA binding protein 9"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005575 "cellular_component" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0008150 "biological_process" evidence=ND] [GO:0016568
"chromatin modification" evidence=IEA] [GO:0016787 "hydrolase
activity" evidence=IEA] [GO:0016817 "hydrolase activity, acting on
acid anhydrides" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
MGI:MGI:1924001 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0006355 GO:GO:0003677 GO:GO:0006351
GO:GO:0016568 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 PROSITE:PS00598 HOVERGEN:HBG081150
HOGENOM:HOG000246942 GeneTree:ENSGT00560000077077 CTD:80205
KO:K14438 OMA:MWGHQTA EMBL:DQ127229 EMBL:AK034446 EMBL:AK039562
EMBL:AK084000 EMBL:AB093226 EMBL:BC052896 IPI:IPI00229650
IPI:IPI00758139 RefSeq:NP_796198.1 UniGene:Mm.100615
ProteinModelPortal:Q8BYH8 SMR:Q8BYH8 STRING:Q8BYH8
PhosphoSite:Q8BYH8 PaxDb:Q8BYH8 PRIDE:Q8BYH8
Ensembl:ENSMUST00000048665 Ensembl:ENSMUST00000109614 GeneID:109151
KEGG:mmu:109151 UCSC:uc009msf.2 UCSC:uc009msi.2 InParanoid:Q8BYH8
OrthoDB:EOG4548XQ ChiTaRS:CHD9 NextBio:361700 Bgee:Q8BYH8
CleanEx:MM_CHD9 Genevestigator:Q8BYH8 Uniprot:Q8BYH8
Length = 2885
Score = 353 (129.3 bits), Expect = 2.1e-30, P = 2.1e-30
Identities = 69/130 (53%), Positives = 93/130 (71%)
Query: 32 LIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVD 91
+IQ GKL +D +L K+KAGGH+VLIF+QM R LD+LE +L ++Y R+DG + +
Sbjct: 1176 MIQ-SAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGN 1234
Query: 92 QRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRI 150
RQ ++RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRI
Sbjct: 1235 LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 1294
Query: 151 GQTRDVHIYR 160
GQ + V +YR
Sbjct: 1295 GQNKAVKVYR 1304
>UNIPROTKB|Q3L8U1 [details] [associations]
symbol:CHD9 "Chromodomain-helicase-DNA-binding protein 9"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0006351 "transcription, DNA-dependent"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005654
"nucleoplasm" evidence=TAS] [GO:0044255 "cellular lipid metabolic
process" evidence=TAS] [GO:0044281 "small molecule metabolic
process" evidence=TAS] [GO:0005515 "protein binding" evidence=IPI]
Reactome:REACT_111217 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005737 GO:GO:0005654 GO:GO:0006355 GO:GO:0044281
GO:GO:0003677 GO:GO:0044255 GO:GO:0006351 GO:GO:0016568
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOVERGEN:HBG081150 EMBL:AY243500 EMBL:DQ333316
EMBL:AY647157 EMBL:AC007906 EMBL:AC079416 EMBL:BC140815
EMBL:AB002306 EMBL:AF150735 EMBL:AK022582 IPI:IPI00383105
IPI:IPI00746795 IPI:IPI00914955 RefSeq:NP_079410.4 UniGene:Hs.59159
UniGene:Hs.622347 ProteinModelPortal:Q3L8U1 SMR:Q3L8U1
IntAct:Q3L8U1 STRING:Q3L8U1 PhosphoSite:Q3L8U1 DMDM:215273951
PaxDb:Q3L8U1 PRIDE:Q3L8U1 Ensembl:ENST00000398510
Ensembl:ENST00000447540 Ensembl:ENST00000564845
Ensembl:ENST00000566029 GeneID:80205 KEGG:hsa:80205 UCSC:uc002egy.3
UCSC:uc002ehb.3 UCSC:uc002ehc.3 CTD:80205 GeneCards:GC16P053041
HGNC:HGNC:25701 neXtProt:NX_Q3L8U1 PharmGKB:PA128394727
InParanoid:Q3L8U1 KO:K14438 OMA:MWGHQTA GenomeRNAi:80205
NextBio:70576 ArrayExpress:Q3L8U1 Bgee:Q3L8U1 CleanEx:HS_CHD9
Genevestigator:Q3L8U1 GermOnline:ENSG00000177200 Uniprot:Q3L8U1
Length = 2897
Score = 353 (129.3 bits), Expect = 2.1e-30, P = 2.1e-30
Identities = 69/130 (53%), Positives = 93/130 (71%)
Query: 32 LIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVD 91
+IQ GKL +D +L K+KAGGH+VLIF+QM R LD+LE +L ++Y R+DG + +
Sbjct: 1177 MIQ-SAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGN 1235
Query: 92 QRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRI 150
RQ ++RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRI
Sbjct: 1236 LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 1295
Query: 151 GQTRDVHIYR 160
GQ + V +YR
Sbjct: 1296 GQNKAVKVYR 1305
>UNIPROTKB|E1BDZ3 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:DAAA02046444
IPI:IPI00705152 Ensembl:ENSBTAT00000002955 Uniprot:E1BDZ3
Length = 2900
Score = 353 (129.3 bits), Expect = 2.1e-30, P = 2.1e-30
Identities = 69/130 (53%), Positives = 93/130 (71%)
Query: 32 LIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVD 91
+IQ GKL +D +L K+KAGGH+VLIF+QM R LD+LE +L ++Y R+DG + +
Sbjct: 1178 MIQ-SAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGN 1236
Query: 92 QRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRI 150
RQ ++RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRI
Sbjct: 1237 LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 1296
Query: 151 GQTRDVHIYR 160
GQ + V +YR
Sbjct: 1297 GQNKAVKVYR 1306
>UNIPROTKB|E2RDK8 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AAEX03001603
EMBL:AAEX03001604 EMBL:AAEX03001605 Ensembl:ENSCAFT00000015413
Uniprot:E2RDK8
Length = 2902
Score = 353 (129.3 bits), Expect = 2.1e-30, P = 2.1e-30
Identities = 69/130 (53%), Positives = 93/130 (71%)
Query: 32 LIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVD 91
+IQ GKL +D +L K+KAGGH+VLIF+QM R LD+LE +L ++Y R+DG + +
Sbjct: 1179 MIQ-SAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGN 1237
Query: 92 QRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRI 150
RQ ++RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRI
Sbjct: 1238 LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRI 1297
Query: 151 GQTRDVHIYR 160
GQ + V +YR
Sbjct: 1298 GQNKAVKVYR 1307
>DICTYBASE|DDB_G0292948 [details] [associations]
symbol:isw "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA;ISS] [GO:0005634
"nucleus" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0016587 "Isw1
complex" evidence=ISS] [GO:0006200 "ATP catabolic process"
evidence=ISS] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 dictyBase:DDB_G0292948 GO:GO:0005524
GenomeReviews:CM000155_GR GO:GO:0003677 EMBL:AAFI02000197
GO:GO:0016887 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016587 KO:K11654 SUPFAM:SSF101224
RefSeq:XP_629432.1 ProteinModelPortal:Q54CI4 STRING:Q54CI4
PRIDE:Q54CI4 EnsemblProtists:DDB0231763 GeneID:8628951
KEGG:ddi:DDB_G0292948 InParanoid:Q54CI4 OMA:IREANAF
ProtClustDB:CLSZ2728711 Uniprot:Q54CI4
Length = 1221
Score = 348 (127.6 bits), Expect = 2.2e-30, P = 2.2e-30
Identities = 66/124 (53%), Positives = 91/124 (73%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK+ LD +L+KLK G RVLIF+QM+RMLD+LE ++ + G+ Y R+DG+T+ R+ +
Sbjct: 581 GKMALLDKLLKKLKERGSRVLIFSQMSRMLDILEDYMLYRGYKYARIDGSTESIVRENSI 640
Query: 98 ERFNMDAR-IFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
E +N +F F+L+TR+GG+GI L AD V+ +DSDWNP MD QAQDR HRIGQT+ V
Sbjct: 641 ENYNKPGSDLFAFLLTTRAGGLGITLNTADIVILFDSDWNPQMDLQAQDRAHRIGQTKPV 700
Query: 157 HIYR 160
+YR
Sbjct: 701 TVYR 704
>TAIR|locus:2041644 [details] [associations]
symbol:CHR5 "chromatin remodeling 5" species:3702
"Arabidopsis thaliana" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=IEA;ISS] [GO:0005524 "ATP binding"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=ISM;IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0009506 "plasmodesma" evidence=IDA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0009506 GO:GO:0005524 GO:GO:0005634
EMBL:CP002685 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907 KO:K11367
IPI:IPI00521189 RefSeq:NP_178970.3 UniGene:At.40665 PRIDE:F4IV99
EnsemblPlants:AT2G13370.1 GeneID:815823 KEGG:ath:AT2G13370
OMA:ARNTKSY Uniprot:F4IV99
Length = 1724
Score = 350 (128.3 bits), Expect = 2.3e-30, P = 2.3e-30
Identities = 71/124 (57%), Positives = 87/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +L+ HRVLIF+QM RMLD+L +L+ G + RLDG+TK + RQ M
Sbjct: 939 GKLVILDKLLVRLRETKHRVLIFSQMVRMLDILAEYLSLRGFQFQRLDGSTKAELRQQAM 998
Query: 98 ERFNMDARI-FCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN A FCF+LSTR+GG+GINL ADTVV +DSDWNP D QA R HRIGQ V
Sbjct: 999 DHFNAPASDDFCFLLSTRAGGLGINLATADTVVIFDSDWNPQNDLQAMSRAHRIGQQEVV 1058
Query: 157 HIYR 160
+IYR
Sbjct: 1059 NIYR 1062
>WB|WBGene00000482 [details] [associations]
symbol:chd-3 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=TAS]
[GO:0040027 "negative regulation of vulval development"
evidence=IMP] [GO:0046580 "negative regulation of Ras protein
signal transduction" evidence=IMP] [GO:0001709 "cell fate
determination" evidence=IMP] [GO:0000118 "histone deacetylase
complex" evidence=ISS] [GO:0003682 "chromatin binding"
evidence=TAS] [GO:0003678 "DNA helicase activity" evidence=ISS]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0003682 GO:GO:0006338
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0003678
GO:GO:0001709 GO:GO:0046580 GO:GO:0008026 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0000118 GeneTree:ENSGT00560000076896
EMBL:AF308444 EMBL:Z67884 EMBL:Z67881 PIR:T20160 RefSeq:NP_510140.1
UniGene:Cel.16950 ProteinModelPortal:Q22516 SMR:Q22516
STRING:Q22516 PaxDb:Q22516 EnsemblMetazoa:T14G8.1 GeneID:181421
KEGG:cel:CELE_T14G8.1 UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1
HOGENOM:HOG000231124 InParanoid:Q22516 OMA:INIIMEL NextBio:913870
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
Uniprot:Q22516
Length = 1787
Score = 350 (128.3 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 71/126 (56%), Positives = 88/126 (69%)
Query: 36 DCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQV 95
+ GK L +LRKLK GGHRVLIF+QMT MLD+LE F + G+ Y R+DG+ QRQ
Sbjct: 938 NAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQD 997
Query: 96 LMERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTR 154
++R+N A+ F F+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HR+GQ
Sbjct: 998 AIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKH 1057
Query: 155 DVHIYR 160
V IYR
Sbjct: 1058 KVMIYR 1063
>UNIPROTKB|Q22516 [details] [associations]
symbol:chd-3 "Chromodomain-helicase-DNA-binding protein 3
homolog" species:6239 "Caenorhabditis elegans" [GO:0032508 "DNA
duplex unwinding" evidence=ISS] InterPro:IPR001841
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR012957
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184
SMART:SM00249 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 GO:GO:0003682 GO:GO:0006338 Gene3D:3.30.40.10
InterPro:IPR011011 InterPro:IPR013083 SUPFAM:SSF57903
InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0003678 GO:GO:0001709 GO:GO:0046580
GO:GO:0008026 InterPro:IPR023780 PROSITE:PS00598 GO:GO:0000118
GeneTree:ENSGT00560000076896 EMBL:AF308444 EMBL:Z67884 EMBL:Z67881
PIR:T20160 RefSeq:NP_510140.1 UniGene:Cel.16950
ProteinModelPortal:Q22516 SMR:Q22516 STRING:Q22516 PaxDb:Q22516
EnsemblMetazoa:T14G8.1 GeneID:181421 KEGG:cel:CELE_T14G8.1
UCSC:T14G8.1 CTD:181421 WormBase:T14G8.1 HOGENOM:HOG000231124
InParanoid:Q22516 OMA:INIIMEL NextBio:913870 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 Uniprot:Q22516
Length = 1787
Score = 350 (128.3 bits), Expect = 2.4e-30, P = 2.4e-30
Identities = 71/126 (56%), Positives = 88/126 (69%)
Query: 36 DCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQV 95
+ GK L +LRKLK GGHRVLIF+QMT MLD+LE F + G+ Y R+DG+ QRQ
Sbjct: 938 NAGKFVLLQKMLRKLKDGGHRVLIFSQMTMMLDILEDFCDVEGYKYERIDGSITGQQRQD 997
Query: 96 LMERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTR 154
++R+N A+ F F+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HR+GQ
Sbjct: 998 AIDRYNAPGAKQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKH 1057
Query: 155 DVHIYR 160
V IYR
Sbjct: 1058 KVMIYR 1063
>UNIPROTKB|F1N8K9 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] InterPro:IPR001650
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003676 GO:GO:0004386 GeneTree:ENSGT00560000076896
EMBL:AADN02065411 EMBL:AADN02065412 EMBL:AADN02065413
IPI:IPI00592819 Ensembl:ENSGALT00000023600 ArrayExpress:F1N8K9
Uniprot:F1N8K9
Length = 559
Score = 339 (124.4 bits), Expect = 2.6e-30, P = 2.6e-30
Identities = 67/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +L+ G+RVLIF+QM RMLD+L +L + + RLDG+ K + R+ +
Sbjct: 36 GKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQAL 95
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + + FCF+LSTR+GG+GINL ADTVV +DSDWNP D QAQ R HRIGQ + V
Sbjct: 96 DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 155
Query: 157 HIYR 160
+IYR
Sbjct: 156 NIYR 159
>UNIPROTKB|E2RG62 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0070933 "histone H4 deacetylation"
evidence=IEA] [GO:0070932 "histone H3 deacetylation" evidence=IEA]
[GO:0051304 "chromosome separation" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 EMBL:AAEX03016768
EMBL:AAEX03016769 Ensembl:ENSCAFT00000015951 Uniprot:E2RG62
Length = 1026
Score = 346 (126.9 bits), Expect = 2.7e-30, P = 2.7e-30
Identities = 65/125 (52%), Positives = 89/125 (71%)
Query: 36 DCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQV 95
D GK + L IL +LK G RV++F+Q T MLD+LE L H H YLRLDG T++ +R
Sbjct: 852 DSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIH 911
Query: 96 LMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRD 155
L++ FN D IF F+LST++GG+GINLT A+ V+ +D D NP D QA+DRCHR+GQT++
Sbjct: 912 LIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKE 971
Query: 156 VHIYR 160
V + +
Sbjct: 972 VLVIK 976
>UNIPROTKB|J9NX47 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
EMBL:AAEX03016768 EMBL:AAEX03016769 Ensembl:ENSCAFT00000044961
Uniprot:J9NX47
Length = 1026
Score = 346 (126.9 bits), Expect = 2.7e-30, P = 2.7e-30
Identities = 65/125 (52%), Positives = 89/125 (71%)
Query: 36 DCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQV 95
D GK + L IL +LK G RV++F+Q T MLD+LE L H H YLRLDG T++ +R
Sbjct: 852 DSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIH 911
Query: 96 LMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRD 155
L++ FN D IF F+LST++GG+GINLT A+ V+ +D D NP D QA+DRCHR+GQT++
Sbjct: 912 LIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKE 971
Query: 156 VHIYR 160
V + +
Sbjct: 972 VLVIK 976
>UNIPROTKB|J9PA79 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003677 "DNA
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GeneTree:ENSGT00630000089890
OMA:KNQRGIQ EMBL:AAEX03016768 EMBL:AAEX03016769
Ensembl:ENSCAFT00000043847 Uniprot:J9PA79
Length = 1026
Score = 346 (126.9 bits), Expect = 2.7e-30, P = 2.7e-30
Identities = 65/125 (52%), Positives = 89/125 (71%)
Query: 36 DCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQV 95
D GK + L IL +LK G RV++F+Q T MLD+LE L H H YLRLDG T++ +R
Sbjct: 852 DSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIH 911
Query: 96 LMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRD 155
L++ FN D IF F+LST++GG+GINLT A+ V+ +D D NP D QA+DRCHR+GQT++
Sbjct: 912 LIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKE 971
Query: 156 VHIYR 160
V + +
Sbjct: 972 VLVIK 976
>UNIPROTKB|Q9H4L7 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9606 "Homo sapiens" [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0009117 "nucleotide metabolic process" evidence=NAS]
[GO:0003676 "nucleic acid binding" evidence=NAS] [GO:0016363
"nuclear matrix" evidence=NAS] [GO:0051260 "protein
homooligomerization" evidence=NAS] [GO:0000018 "regulation of DNA
recombination" evidence=IEP] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=NAS] [GO:0016568 "chromatin
modification" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0000729
"DNA double-strand break processing" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0035861
"site of double-strand break" evidence=IDA] [GO:0043596 "nuclear
replication fork" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=NAS] [GO:0051304 "chromosome separation" evidence=IMP]
[GO:0070932 "histone H3 deacetylation" evidence=IMP] [GO:0070933
"histone H4 deacetylation" evidence=IMP] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0005634 "nucleus" evidence=IDA]
[GO:0005730 "nucleolus" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR003892 InterPro:IPR009060
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0045893 GO:GO:0003677
GO:GO:0009117 GO:GO:0051260 GO:GO:0043596 GO:GO:0004386
GO:GO:0016363 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000729 GO:GO:0000018
HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439 GO:GO:0051304
OMA:KNQRGIQ EMBL:AY008271 EMBL:AB032948 EMBL:AK023990 EMBL:AK027490
EMBL:AK301668 EMBL:AC096746 EMBL:BC017953 EMBL:BC045534
EMBL:AL359929 EMBL:AL512768 IPI:IPI00008422 IPI:IPI00220119
RefSeq:NP_001121901.1 RefSeq:NP_001121902.1 RefSeq:NP_001241878.1
RefSeq:NP_064544.2 UniGene:Hs.410406 ProteinModelPortal:Q9H4L7
SMR:Q9H4L7 STRING:Q9H4L7 PhosphoSite:Q9H4L7 DMDM:306526240
PaxDb:Q9H4L7 PRIDE:Q9H4L7 DNASU:56916 Ensembl:ENST00000354268
Ensembl:ENST00000359052 Ensembl:ENST00000457823
Ensembl:ENST00000509418 GeneID:56916 KEGG:hsa:56916 UCSC:uc003htb.4
UCSC:uc003htc.4 CTD:56916 GeneCards:GC04P095128 H-InvDB:HIX0004380
HGNC:HGNC:18398 HPA:HPA016737 MIM:136000 MIM:612761
neXtProt:NX_Q9H4L7 Orphanet:289465 PharmGKB:PA134954731
HOVERGEN:HBG055804 ChiTaRS:SMARCAD1 GenomeRNAi:56916 NextBio:62407
ArrayExpress:Q9H4L7 Bgee:Q9H4L7 CleanEx:HS_SMARCAD1
Genevestigator:Q9H4L7 GermOnline:ENSG00000163104 Uniprot:Q9H4L7
Length = 1026
Score = 346 (126.9 bits), Expect = 2.7e-30, P = 2.7e-30
Identities = 65/125 (52%), Positives = 89/125 (71%)
Query: 36 DCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQV 95
D GK + L IL +LK G RV++F+Q T MLD+LE L H H YLRLDG T++ +R
Sbjct: 852 DSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIH 911
Query: 96 LMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRD 155
L++ FN D IF F+LST++GG+GINLT A+ V+ +D D NP D QA+DRCHR+GQT++
Sbjct: 912 LIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKE 971
Query: 156 VHIYR 160
V + +
Sbjct: 972 VLVIK 976
>ZFIN|ZDB-GENE-030131-4532 [details] [associations]
symbol:chd4b "chromodomain helicase DNA binding
protein 4b" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0016818 "hydrolase activity, acting on acid
anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0008026 "ATP-dependent helicase activity" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0046872 "metal
ion binding" evidence=IEA] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-030131-4532
GO:GO:0005524 GO:GO:0005634 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 EMBL:BX511250
IPI:IPI00931161 RefSeq:XP_685699.4 UniGene:Dr.75373
Ensembl:ENSDART00000092902 Ensembl:ENSDART00000148389 GeneID:560622
KEGG:dre:560622 CTD:560622 NextBio:20883532 Uniprot:F1RBT2
Length = 1953
Score = 350 (128.3 bits), Expect = 2.7e-30, P = 2.7e-30
Identities = 73/124 (58%), Positives = 87/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +L+KLK GGHRVLIF+QMT+MLD+LE FL G+ Y R+DG RQ +
Sbjct: 1060 GKLMLLFKMLKKLKEGGHRVLIFSQMTKMLDLLEDFLENEGYKYERIDGGVTGGMRQEAI 1119
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A F F+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HRIGQ + V
Sbjct: 1120 DRFNAPGAPQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNKKV 1179
Query: 157 HIYR 160
IYR
Sbjct: 1180 MIYR 1183
>UNIPROTKB|E1B7X9 [details] [associations]
symbol:SMARCAD1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:9913 "Bos taurus" [GO:0035861 "site of
double-strand break" evidence=ISS] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=ISS] [GO:0000729 "DNA double-strand
break processing" evidence=ISS] [GO:0070933 "histone H4
deacetylation" evidence=ISS] [GO:0070932 "histone H3 deacetylation"
evidence=ISS] [GO:0005634 "nucleus" evidence=ISS] [GO:0000792
"heterochromatin" evidence=ISS] [GO:0051304 "chromosome separation"
evidence=ISS] [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000792 GO:GO:0070932 GO:GO:0070933 GO:GO:0000729
GO:GO:0000018 GO:GO:0035861 GeneTree:ENSGT00630000089890
GO:GO:0051304 EMBL:DAAA02016925 EMBL:DAAA02016926 IPI:IPI00826348
UniGene:Bt.77636 Ensembl:ENSBTAT00000047936 OMA:KNQRGIQ
Uniprot:E1B7X9
Length = 1028
Score = 346 (126.9 bits), Expect = 2.7e-30, P = 2.7e-30
Identities = 65/125 (52%), Positives = 89/125 (71%)
Query: 36 DCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQV 95
D GK + L IL +LK G RV++F+Q T MLD+LE L H H YLRLDG T++ +R
Sbjct: 854 DSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIH 913
Query: 96 LMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRD 155
L++ FN D IF F+LST++GG+GINLT A+ V+ +D D NP D QA+DRCHR+GQT++
Sbjct: 914 LIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKE 973
Query: 156 VHIYR 160
V + +
Sbjct: 974 VLVIK 978
>UNIPROTKB|F1RWW3 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0070933 "histone H4 deacetylation" evidence=IEA]
[GO:0070932 "histone H3 deacetylation" evidence=IEA] [GO:0051304
"chromosome separation" evidence=IEA] [GO:0043596 "nuclear
replication fork" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0035861 "site of
double-strand break" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=IEA]
[GO:0000018 "regulation of DNA recombination" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR003892 InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51140 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0003677 GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792
GO:GO:0070932 GO:GO:0070933 GO:GO:0000018
GeneTree:ENSGT00630000089890 GO:GO:0051304 OMA:KNQRGIQ
EMBL:CU951443 Ensembl:ENSSSCT00000010066 Uniprot:F1RWW3
Length = 1029
Score = 346 (126.9 bits), Expect = 2.7e-30, P = 2.7e-30
Identities = 65/125 (52%), Positives = 89/125 (71%)
Query: 36 DCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQV 95
D GK + L IL +LK G RV++F+Q T MLD+LE L H H YLRLDG T++ +R
Sbjct: 855 DSGKFRVLGCILSELKQKGDRVVLFSQFTMMLDILEVLLKHHQHRYLRLDGKTQISERIH 914
Query: 96 LMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRD 155
L++ FN D IF F+LST++GG+GINLT A+ V+ +D D NP D QA+DRCHR+GQT++
Sbjct: 915 LIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTKE 974
Query: 156 VHIYR 160
V + +
Sbjct: 975 VLVIK 979
>CGD|CAL0005422 [details] [associations]
symbol:ISW2 species:5476 "Candida albicans" [GO:0001410
"chlamydospore formation" evidence=IMP] [GO:0030447 "filamentous
growth" evidence=IMP] [GO:0071280 "cellular response to copper ion"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0008623 "CHRAC" evidence=IEA] [GO:0060195 "negative regulation
of antisense RNA transcription" evidence=IEA] [GO:0006338
"chromatin remodeling" evidence=IEA] [GO:0000183 "chromatin
silencing at rDNA" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0046020 "negative
regulation of transcription from RNA polymerase II promoter by
pheromones" evidence=IEA] [GO:0006348 "chromatin silencing at
telomere" evidence=IEA] [GO:0016584 "nucleosome positioning"
evidence=IEA] [GO:0015616 "DNA translocase activity" evidence=IEA]
[GO:0003697 "single-stranded DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 346 (126.9 bits), Expect = 2.8e-30, P = 2.8e-30
Identities = 67/133 (50%), Positives = 93/133 (69%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D L+ Y+ GK+ LD +L+K KA G RVLIF+QM+R+LD+LE + F + Y R+DG+T
Sbjct: 445 DEHLV-YNSGKMIILDKMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRIDGST 503
Query: 89 KVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRC 147
+ R ++ +N D+ F F+L+TR+GG+GINLT AD V+ YDSDWNP D QA DR
Sbjct: 504 SHEDRIEAIDEYNAPDSEKFIFLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMDRA 563
Query: 148 HRIGQTRDVHIYR 160
HRIGQ + V ++R
Sbjct: 564 HRIGQKKQVKVFR 576
>UNIPROTKB|Q5A310 [details] [associations]
symbol:ISW2 "Putative uncharacterized protein ISW2"
species:237561 "Candida albicans SC5314" [GO:0001410 "chlamydospore
formation" evidence=IMP] [GO:0030447 "filamentous growth"
evidence=IMP] [GO:0035690 "cellular response to drug" evidence=IMP]
[GO:0071280 "cellular response to copper ion" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 CGD:CAL0005422 GO:GO:0005524
GO:GO:0001410 GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0071280 GO:GO:0035690 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 EMBL:AACQ01000074 GO:GO:0030447 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224 RefSeq:XP_716066.1
ProteinModelPortal:Q5A310 STRING:Q5A310 GeneID:3642235
KEGG:cal:CaO19.7401 Uniprot:Q5A310
Length = 1056
Score = 346 (126.9 bits), Expect = 2.8e-30, P = 2.8e-30
Identities = 67/133 (50%), Positives = 93/133 (69%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D L+ Y+ GK+ LD +L+K KA G RVLIF+QM+R+LD+LE + F + Y R+DG+T
Sbjct: 445 DEHLV-YNSGKMIILDKMLKKFKAEGSRVLIFSQMSRVLDILEDYCYFRDYEYCRIDGST 503
Query: 89 KVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRC 147
+ R ++ +N D+ F F+L+TR+GG+GINLT AD V+ YDSDWNP D QA DR
Sbjct: 504 SHEDRIEAIDEYNAPDSEKFIFLLTTRAGGLGINLTSADIVILYDSDWNPQADLQAMDRA 563
Query: 148 HRIGQTRDVHIYR 160
HRIGQ + V ++R
Sbjct: 564 HRIGQKKQVKVFR 576
>UNIPROTKB|D4AA07 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS51194 SMART:SM00490 SMART:SM00592 RGD:621728
GO:GO:0005524 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
OrthoDB:EOG418BMJ IPI:IPI00915110 Ensembl:ENSRNOT00000060926
ArrayExpress:D4AA07 Uniprot:D4AA07
Length = 1262
Score = 347 (127.2 bits), Expect = 3.0e-30, P = 3.0e-30
Identities = 65/124 (52%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A H+VL+F QMT ++ ++E + + G YLRLDGTTK + R +L+
Sbjct: 879 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 938
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ +V
Sbjct: 939 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 998
Query: 157 HIYR 160
+ R
Sbjct: 999 RVLR 1002
>UNIPROTKB|Q5FWR0 [details] [associations]
symbol:smarcad1 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A containing
DEAD/H box 1" species:8364 "Xenopus (Silurana) tropicalis"
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 HOGENOM:HOG000172362 GO:GO:0035861 KO:K14439
HOVERGEN:HBG055804 OrthoDB:EOG4RV2QW EMBL:AAMC01061573
EMBL:AAMC01061574 EMBL:AAMC01061575 EMBL:BC089242
RefSeq:NP_001015697.1 UniGene:Str.34312 ProteinModelPortal:Q5FWR0
GeneID:548414 KEGG:xtr:548414 Xenbase:XB-GENE-492700
InParanoid:Q5FWR0 Uniprot:Q5FWR0
Length = 1003
Score = 345 (126.5 bits), Expect = 3.3e-30, P = 3.3e-30
Identities = 66/147 (44%), Positives = 98/147 (66%)
Query: 16 LHPVTSAMCT--QFPDPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAF 73
LH + + T Q+ + + D GK L+ +L +K G RV++F+Q T MLD++E F
Sbjct: 807 LHRLCNEFTTLSQYKLEKELILDSGKFNILEKLLSDIKKKGDRVVLFSQFTMMLDIIEVF 866
Query: 74 LNFHGHIYLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDS 133
L H H Y+RLDG T++ +R L++ FN D IF F+LST++GG+GINLT A+ V+ +D
Sbjct: 867 LRHHQHRYVRLDGKTQISERIHLIDEFNTDMDIFIFLLSTKAGGLGINLTSANIVILHDI 926
Query: 134 DWNPTMDAQAQDRCHRIGQTRDVHIYR 160
D NP D QA+DRCHR+GQT++V + +
Sbjct: 927 DCNPYNDKQAEDRCHRVGQTKEVKVIK 953
>FB|FBgn0000212 [details] [associations]
symbol:brm "brahma" species:7227 "Drosophila melanogaster"
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=ISS;IDA]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISS;IDA] [GO:0016887 "ATPase activity" evidence=ISS]
[GO:0008094 "DNA-dependent ATPase activity" evidence=NAS]
[GO:0003713 "transcription coactivator activity" evidence=ISS;NAS]
[GO:0005634 "nucleus" evidence=IDA;NAS] [GO:0048096
"chromatin-mediated maintenance of transcription" evidence=NAS]
[GO:0005515 "protein binding" evidence=IPI] [GO:0035060 "brahma
complex" evidence=IDA;TAS] [GO:0048477 "oogenesis" evidence=TAS]
[GO:0045749 "negative regulation of S phase of mitotic cell cycle"
evidence=IGI] [GO:0035172 "hemocyte proliferation" evidence=TAS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0007474 "imaginal disc-derived wing vein specification"
evidence=IMP] [GO:0048666 "neuron development" evidence=IMP]
[GO:0007517 "muscle organ development" evidence=IMP] [GO:0048813
"dendrite morphogenesis" evidence=IMP] [GO:0006911 "phagocytosis,
engulfment" evidence=IMP] [GO:0007409 "axonogenesis" evidence=IMP]
[GO:0007480 "imaginal disc-derived leg morphogenesis" evidence=IGI]
[GO:0008586 "imaginal disc-derived wing vein morphogenesis"
evidence=IMP] [GO:0008587 "imaginal disc-derived wing margin
morphogenesis" evidence=IMP] [GO:0045742 "positive regulation of
epidermal growth factor receptor signaling pathway" evidence=IMP]
[GO:0070983 "dendrite guidance" evidence=IMP] [GO:0022008
"neurogenesis" evidence=IMP] [GO:0043974 "histone H3-K27
acetylation" evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0045893 GO:GO:0006911 EMBL:AE014296 GO:GO:0003677
GO:GO:0008586 GO:GO:0007474 GO:GO:0048477 GO:GO:0006351
GO:GO:0016887 GO:GO:0007517 GO:GO:0007409 GO:GO:0004386
GO:GO:0045742 GO:GO:0007480 GO:GO:0045749 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0008587 KO:K11647 EMBL:M85049
EMBL:AY095048 EMBL:BT009972 PIR:A42091 RefSeq:NP_536745.4
RefSeq:NP_536746.1 RefSeq:NP_730088.1 RefSeq:NP_730089.1
UniGene:Dm.5356 ProteinModelPortal:P25439 SMR:P25439 DIP:DIP-36728N
IntAct:P25439 MINT:MINT-6541230 STRING:P25439 PaxDb:P25439
EnsemblMetazoa:FBtr0075525 EnsemblMetazoa:FBtr0075526 GeneID:39744
KEGG:dme:Dmel_CG5942 CTD:39744 FlyBase:FBgn0000212
GeneTree:ENSGT00550000074659 InParanoid:P25439 OMA:QKKYTIS
OrthoDB:EOG4K3JB3 PhylomeDB:P25439 ChiTaRS:SMARCA2 GenomeRNAi:39744
NextBio:815155 Bgee:P25439 GermOnline:CG5942 GO:GO:0035060
GO:GO:0070983 GO:GO:0035172 GO:GO:0043974 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 Uniprot:P25439
Length = 1638
Score = 348 (127.6 bits), Expect = 3.4e-30, P = 3.4e-30
Identities = 68/124 (54%), Positives = 87/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KLKA HRVL+F QMT+ + ++E +L + YLRLDGTTK + R L+
Sbjct: 1098 GKFELLDRILPKLKATNHRVLLFCQMTQCMTIIEDYLGWRQFGYLRLDGTTKAEDRGELL 1157
Query: 98 ERFNMDAR-IFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+FN +F F+LSTR+GG+G+NL ADTVV +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1158 RKFNAKGSDVFVFLLSTRAGGLGLNLQTADTVVIFDSDWNPHQDLQAQDRAHRIGQRNEV 1217
Query: 157 HIYR 160
+ R
Sbjct: 1218 RVLR 1221
>WB|WBGene00010845 [details] [associations]
symbol:M03C11.8 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0009792 "embryo development
ending in birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0009792
GO:GO:0003677 GO:GO:0006281 GO:GO:0016568 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 KO:K14439
GeneTree:ENSGT00630000089890 EMBL:Z49128 EMBL:AL021171 PIR:T23046
RefSeq:NP_499301.2 ProteinModelPortal:G5EDG2 SMR:G5EDG2
EnsemblMetazoa:M03C11.8 GeneID:176462 KEGG:cel:CELE_M03C11.8
WormBase:M03C11.8 OMA:KEERYMA NextBio:892680 Uniprot:G5EDG2
Length = 989
Score = 344 (126.2 bits), Expect = 4.1e-30, P = 4.1e-30
Identities = 63/123 (51%), Positives = 89/123 (72%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LDV+L +++ G +VLIF+Q T MLD+LE +LN G+ Y RLDG T V RQ ++
Sbjct: 753 GKCEQLDVMLPEIQKKGDKVLIFSQFTSMLDILEVYLNIRGYSYKRLDGQTPVLDRQEMI 812
Query: 98 ERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVH 157
FN+ +F F+LSTR+GG+GINLT A+ ++ +D D+NP D QA+DRCHR+GQ + VH
Sbjct: 813 NEFNLSKDLFVFLLSTRAGGLGINLTSANHIIIHDIDFNPYNDKQAEDRCHRMGQEKPVH 872
Query: 158 IYR 160
+ R
Sbjct: 873 VTR 875
>UNIPROTKB|A7Z019 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=ISS] [GO:0071564
"npBAF complex" evidence=ISS] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0071565 GO:GO:0000902
GO:GO:0004386 GO:GO:0001570 GO:GO:0035116 GO:GO:0005719
GO:GO:0030902 GO:GO:0048730 GO:GO:0000977 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0019827
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347 GO:GO:0043966
GO:GO:0043388 KO:K11647 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
OrthoDB:EOG418BMJ EMBL:BC153216 IPI:IPI00693529
RefSeq:NP_001099084.1 UniGene:Bt.27590 ProteinModelPortal:A7Z019
SMR:A7Z019 STRING:A7Z019 PRIDE:A7Z019 GeneID:414274 KEGG:bta:414274
CTD:6597 InParanoid:A7Z019 NextBio:20818684 ArrayExpress:A7Z019
Uniprot:A7Z019
Length = 1606
Score = 347 (127.2 bits), Expect = 4.3e-30, P = 4.3e-30
Identities = 65/124 (52%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A H+VL+F QMT ++ ++E + + G YLRLDGTTK + R +L+
Sbjct: 1072 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 1131
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1132 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1191
Query: 157 HIYR 160
+ R
Sbjct: 1192 RVLR 1195
>MGI|MGI:88192 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10090 "Mus musculus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IMP;IDA]
[GO:0000166 "nucleotide binding" evidence=IEA] [GO:0000790 "nuclear
chromatin" evidence=ISO] [GO:0000792 "heterochromatin"
evidence=IDA] [GO:0000902 "cell morphogenesis" evidence=IMP]
[GO:0000977 "RNA polymerase II regulatory region sequence-specific
DNA binding" evidence=IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=ISO] [GO:0001570
"vasculogenesis" evidence=IMP] [GO:0001701 "in utero embryonic
development" evidence=IMP] [GO:0001832 "blastocyst growth"
evidence=IMP] [GO:0001835 "blastocyst hatching" evidence=IMP]
[GO:0001889 "liver development" evidence=IMP] [GO:0002039 "p53
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IDA] [GO:0003713 "transcription
coactivator activity" evidence=ISO] [GO:0003714 "transcription
corepressor activity" evidence=ISO] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin" evidence=IDA]
[GO:0005726 "perichromatin fibrils" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0006200 "ATP catabolic process"
evidence=TAS] [GO:0006334 "nucleosome assembly" evidence=TAS]
[GO:0006337 "nucleosome disassembly" evidence=ISO] [GO:0006338
"chromatin remodeling" evidence=ISO;IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IDA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IMP] [GO:0007403 "glial cell fate determination"
evidence=IMP] [GO:0007507 "heart development" evidence=IMP]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=IPI]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IMP] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA;TAS]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0016887 "ATPase activity"
evidence=IMP;TAS] [GO:0019827 "stem cell maintenance" evidence=IMP]
[GO:0022008 "neurogenesis" evidence=IDA] [GO:0030198 "extracellular
matrix organization" evidence=IMP] [GO:0030216 "keratinocyte
differentiation" evidence=IMP] [GO:0030308 "negative regulation of
cell growth" evidence=ISO] [GO:0030900 "forebrain development"
evidence=IMP] [GO:0030902 "hindbrain development" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=ISO] [GO:0032403
"protein complex binding" evidence=ISO] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IMP] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IMP] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0043388
"positive regulation of DNA binding" evidence=IGI] [GO:0043923
"positive regulation by host of viral transcription" evidence=ISO]
[GO:0043966 "histone H3 acetylation" evidence=IMP] [GO:0045892
"negative regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045893 "positive regulation of transcription, DNA-dependent"
evidence=ISO] [GO:0045944 "positive regulation of transcription
from RNA polymerase II promoter" evidence=IGI;ISO;IMP] [GO:0047485
"protein N-terminus binding" evidence=ISO] [GO:0048562 "embryonic
organ morphogenesis" evidence=IMP] [GO:0048730 "epidermis
morphogenesis" evidence=IMP] [GO:0050681 "androgen receptor
binding" evidence=ISO] [GO:0051091 "positive regulation of
sequence-specific DNA binding transcription factor activity"
evidence=ISO] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IMP] [GO:0060347 "heart trabecula formation" evidence=IGI]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=ISO] [GO:0070577 "histone acetyl-lysine binding"
evidence=ISO] [GO:0071564 "npBAF complex" evidence=ISO;IDA]
[GO:0071565 "nBAF complex" evidence=IDA] [GO:0071778 "WINAC
complex" evidence=ISO] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 MGI:MGI:88192
GO:GO:0005524 GO:GO:0003714 GO:GO:0030216 GO:GO:0045944
GO:GO:0030198 GO:GO:0030900 GO:GO:0001889 EMBL:CH466522
GO:GO:0006351 GO:GO:0003682 GO:GO:0016887 GO:GO:0006338
GO:GO:0000122 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0000902 GO:GO:0004386 GO:GO:0001570 GO:GO:0035116
GO:GO:0005719 GO:GO:0030902 GO:GO:0048730 GO:GO:0000977
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0019827 GO:GO:0006334 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 KO:K11647 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 HOGENOM:HOG000172363
HOVERGEN:HBG056636 GO:GO:0035887 OrthoDB:EOG418BMJ CTD:6597
EMBL:AK147285 EMBL:AK160825 EMBL:AK166837 EMBL:BC079560
IPI:IPI00875789 IPI:IPI00955124 RefSeq:NP_001167549.1
RefSeq:NP_001167550.1 RefSeq:NP_035547.2 UniGene:Mm.286593
ProteinModelPortal:Q3TKT4 SMR:Q3TKT4 DIP:DIP-40650N DIP:DIP-59249N
IntAct:Q3TKT4 MINT:MINT-1958721 STRING:Q3TKT4 PhosphoSite:Q3TKT4
PaxDb:Q3TKT4 PRIDE:Q3TKT4 Ensembl:ENSMUST00000034707
Ensembl:ENSMUST00000098948 Ensembl:ENSMUST00000174008 GeneID:20586
KEGG:mmu:20586 UCSC:uc009omd.2 UCSC:uc009ome.2 InParanoid:Q3TUD7
NextBio:298883 Bgee:Q3TKT4 Genevestigator:Q3TKT4 Uniprot:Q3TKT4
Length = 1613
Score = 347 (127.2 bits), Expect = 4.3e-30, P = 4.3e-30
Identities = 65/124 (52%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A H+VL+F QMT ++ ++E + + G YLRLDGTTK + R +L+
Sbjct: 1080 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 1139
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1140 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1199
Query: 157 HIYR 160
+ R
Sbjct: 1200 RVLR 1203
>RGD|621728 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4"
species:10116 "Rattus norvegicus" [GO:0000122 "negative regulation
of transcription from RNA polymerase II promoter" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=ISO] [GO:0000792
"heterochromatin" evidence=ISO] [GO:0000902 "cell morphogenesis"
evidence=ISO] [GO:0000977 "RNA polymerase II regulatory region
sequence-specific DNA binding" evidence=ISO] [GO:0001105 "RNA
polymerase II transcription coactivator activity" evidence=ISO]
[GO:0001570 "vasculogenesis" evidence=ISO] [GO:0001701 "in utero
embryonic development" evidence=ISO] [GO:0001832 "blastocyst
growth" evidence=ISO] [GO:0001835 "blastocyst hatching"
evidence=ISO] [GO:0001889 "liver development" evidence=ISO]
[GO:0002039 "p53 binding" evidence=ISO] [GO:0003407 "neural retina
development" evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=ISO] [GO:0003713
"transcription coactivator activity" evidence=ISO] [GO:0003714
"transcription corepressor activity" evidence=ISO;ISS] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=ISO;IDA] [GO:0005719 "nuclear euchromatin"
evidence=ISO] [GO:0005726 "perichromatin fibrils" evidence=ISO]
[GO:0006337 "nucleosome disassembly" evidence=ISO;IDA] [GO:0006338
"chromatin remodeling" evidence=ISO] [GO:0006346
"methylation-dependent chromatin silencing" evidence=ISO]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA;ISO] [GO:0007403 "glial cell fate determination"
evidence=ISO] [GO:0007507 "heart development" evidence=ISO]
[GO:0008094 "DNA-dependent ATPase activity" evidence=ISO]
[GO:0008134 "transcription factor binding" evidence=ISO]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=ISO] [GO:0016514 "SWI/SNF complex" evidence=ISO;IDA]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0019827 "stem cell
maintenance" evidence=ISO] [GO:0022008 "neurogenesis" evidence=ISO]
[GO:0030198 "extracellular matrix organization" evidence=ISO]
[GO:0030216 "keratinocyte differentiation" evidence=ISO]
[GO:0030308 "negative regulation of cell growth" evidence=ISO]
[GO:0030900 "forebrain development" evidence=ISO] [GO:0030902
"hindbrain development" evidence=ISO] [GO:0030957 "Tat protein
binding" evidence=ISO] [GO:0032403 "protein complex binding"
evidence=IDA] [GO:0035116 "embryonic hindlimb morphogenesis"
evidence=ISO] [GO:0035887 "aortic smooth muscle cell
differentiation" evidence=ISO] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IDA] [GO:0043388 "positive regulation of DNA
binding" evidence=ISO] [GO:0043923 "positive regulation by host of
viral transcription" evidence=ISO] [GO:0043966 "histone H3
acetylation" evidence=ISO] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0045893 "positive
regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=ISO] [GO:0047485 "protein
N-terminus binding" evidence=ISO] [GO:0048562 "embryonic organ
morphogenesis" evidence=ISO] [GO:0048730 "epidermis morphogenesis"
evidence=ISO] [GO:0050681 "androgen receptor binding" evidence=ISO]
[GO:0051091 "positive regulation of sequence-specific DNA binding
transcription factor activity" evidence=ISO] [GO:0060318
"definitive erythrocyte differentiation" evidence=ISO] [GO:0060347
"heart trabecula formation" evidence=ISO] [GO:0060766 "negative
regulation of androgen receptor signaling pathway" evidence=ISO]
[GO:0070577 "histone acetyl-lysine binding" evidence=ISO]
[GO:0071564 "npBAF complex" evidence=ISO;ISS] [GO:0071565 "nBAF
complex" evidence=ISO;ISS] [GO:0071778 "WINAC complex"
evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0003714
GO:GO:0007399 GO:GO:0006355 GO:GO:0032403 GO:GO:0003677
GO:GO:0006351 GO:GO:0071564 GO:GO:0016514 GO:GO:0071565
GO:GO:0004386 GO:GO:0006337 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 HOGENOM:HOG000172363
HOVERGEN:HBG056636 EMBL:AJ504723 IPI:IPI00781891 UniGene:Rn.23417
ProteinModelPortal:Q8K1P7 SMR:Q8K1P7 IntAct:Q8K1P7 STRING:Q8K1P7
PhosphoSite:Q8K1P7 PRIDE:Q8K1P7 UCSC:RGD:621728 ArrayExpress:Q8K1P7
Genevestigator:Q8K1P7 Uniprot:Q8K1P7
Length = 1613
Score = 347 (127.2 bits), Expect = 4.3e-30, P = 4.3e-30
Identities = 65/124 (52%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A H+VL+F QMT ++ ++E + + G YLRLDGTTK + R +L+
Sbjct: 1080 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 1139
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1140 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1199
Query: 157 HIYR 160
+ R
Sbjct: 1200 RVLR 1203
>UNIPROTKB|E2RJ89 [details] [associations]
symbol:SMARCA4 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 KO:K11647
GeneTree:ENSGT00550000074659 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
CTD:6597 EMBL:AAEX03012414 RefSeq:XP_867683.1
Ensembl:ENSCAFT00000027907 GeneID:476710 KEGG:cfa:476710
OMA:HKPMESM Uniprot:E2RJ89
Length = 1614
Score = 347 (127.2 bits), Expect = 4.3e-30, P = 4.3e-30
Identities = 65/124 (52%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A H+VL+F QMT ++ ++E + + G YLRLDGTTK + R +L+
Sbjct: 1080 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 1139
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1140 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1199
Query: 157 HIYR 160
+ R
Sbjct: 1200 RVLR 1203
>UNIPROTKB|G3V790 [details] [associations]
symbol:Smarca4 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 4, isoform
CRA_b" species:10116 "Rattus norvegicus" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEA] [GO:0000792 "heterochromatin" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000977 "RNA
polymerase II regulatory region sequence-specific DNA binding"
evidence=IEA] [GO:0001570 "vasculogenesis" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001835
"blastocyst hatching" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005719 "nuclear euchromatin"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0006346
"methylation-dependent chromatin silencing" evidence=IEA]
[GO:0007403 "glial cell fate determination" evidence=IEA]
[GO:0008134 "transcription factor binding" evidence=IEA]
[GO:0010424 "DNA methylation on cytosine within a CG sequence"
evidence=IEA] [GO:0019827 "stem cell maintenance" evidence=IEA]
[GO:0030198 "extracellular matrix organization" evidence=IEA]
[GO:0030216 "keratinocyte differentiation" evidence=IEA]
[GO:0030900 "forebrain development" evidence=IEA] [GO:0030902
"hindbrain development" evidence=IEA] [GO:0035116 "embryonic
hindlimb morphogenesis" evidence=IEA] [GO:0035887 "aortic smooth
muscle cell differentiation" evidence=IEA] [GO:0043388 "positive
regulation of DNA binding" evidence=IEA] [GO:0043966 "histone H3
acetylation" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0048562 "embryonic organ morphogenesis" evidence=IEA]
[GO:0048730 "epidermis morphogenesis" evidence=IEA] [GO:0060318
"definitive erythrocyte differentiation" evidence=IEA] [GO:0060347
"heart trabecula formation" evidence=IEA] [GO:0071564 "npBAF
complex" evidence=IEA] [GO:0071565 "nBAF complex" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001487 InterPro:IPR001650
InterPro:IPR006576 InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271
Pfam:PF00439 Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00490
SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:CH473993
UniGene:Rn.23417 Ensembl:ENSRNOT00000013165 Uniprot:G3V790
Length = 1614
Score = 347 (127.2 bits), Expect = 4.3e-30, P = 4.3e-30
Identities = 65/124 (52%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A H+VL+F QMT ++ ++E + + G YLRLDGTTK + R +L+
Sbjct: 1080 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 1139
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1140 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1199
Query: 157 HIYR 160
+ R
Sbjct: 1200 RVLR 1203
>UNIPROTKB|F1M6Y4 [details] [associations]
symbol:Smarca4 "Transcription activator BRG1" species:10116
"Rattus norvegicus" [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0005726
"perichromatin fibrils" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0006346 "methylation-dependent
chromatin silencing" evidence=IEA] [GO:0007403 "glial cell fate
determination" evidence=IEA] [GO:0008134 "transcription factor
binding" evidence=IEA] [GO:0010424 "DNA methylation on cytosine
within a CG sequence" evidence=IEA] [GO:0019827 "stem cell
maintenance" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030900 "forebrain development"
evidence=IEA] [GO:0030902 "hindbrain development" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0035887 "aortic smooth muscle cell differentiation"
evidence=IEA] [GO:0043388 "positive regulation of DNA binding"
evidence=IEA] [GO:0043966 "histone H3 acetylation" evidence=IEA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0048730 "epidermis morphogenesis"
evidence=IEA] [GO:0060318 "definitive erythrocyte differentiation"
evidence=IEA] [GO:0060347 "heart trabecula formation" evidence=IEA]
[GO:0071564 "npBAF complex" evidence=IEA] [GO:0071565 "nBAF
complex" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 RGD:621728 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 InterPro:IPR013999 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 SMART:SM00573 PROSITE:PS51204
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 GO:GO:0005726
GO:GO:0035887 IPI:IPI00951882 Ensembl:ENSRNOT00000060927
ArrayExpress:F1M6Y4 Uniprot:F1M6Y4
Length = 1618
Score = 347 (127.2 bits), Expect = 4.3e-30, P = 4.3e-30
Identities = 65/124 (52%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A H+VL+F QMT ++ ++E + + G YLRLDGTTK + R +L+
Sbjct: 1080 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 1139
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1140 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1199
Query: 157 HIYR 160
+ R
Sbjct: 1200 RVLR 1203
>TAIR|locus:2040184 [details] [associations]
symbol:PKL "PICKLE" species:3702 "Arabidopsis thaliana"
[GO:0003674 "molecular_function" evidence=ND] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA;ISS] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=ISM;IEA;IDA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0003678 "DNA helicase activity" evidence=ISS] [GO:0016568
"chromatin modification" evidence=ISS] [GO:0016887 "ATPase
activity" evidence=ISS] [GO:0045892 "negative regulation of
transcription, DNA-dependent" evidence=IMP] [GO:0009736 "cytokinin
mediated signaling pathway" evidence=IMP] [GO:0009733 "response to
auxin stimulus" evidence=IMP] [GO:2000023 "regulation of lateral
root development" evidence=IMP] [GO:0009788 "negative regulation of
abscisic acid mediated signaling pathway" evidence=IMP] [GO:0006346
"methylation-dependent chromatin silencing" evidence=RCA]
[GO:0016246 "RNA interference" evidence=RCA] [GO:0008283 "cell
proliferation" evidence=IMP] [GO:0009739 "response to gibberellin
stimulus" evidence=IMP] [GO:0048364 "root development"
evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS50089 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 Prosite:PS00518 GO:GO:0005524 GO:GO:0005634
GO:GO:0045892 EMBL:CP002685 GenomeReviews:CT485783_GR GO:GO:0009733
GO:GO:0046872 GO:GO:0003677 GO:GO:0008283 GO:GO:0008270
GO:GO:0016568 GO:GO:0048364 GO:GO:0009739 GO:GO:0009788
GO:GO:0009736 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
PROSITE:PS00598 HOGENOM:HOG000231124 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF185578 EMBL:AF185577 EMBL:AK229409 IPI:IPI00521160
PIR:T52301 RefSeq:NP_565587.1 UniGene:At.11745
ProteinModelPortal:Q9S775 SMR:Q9S775 STRING:Q9S775 PaxDb:Q9S775
PRIDE:Q9S775 EnsemblPlants:AT2G25170.1 GeneID:817055
KEGG:ath:AT2G25170 TAIR:At2g25170 InParanoid:Q9S775 OMA:NVVMYFG
PhylomeDB:Q9S775 ProtClustDB:CLSN2688404 Genevestigator:Q9S775
GermOnline:AT2G25170 GO:GO:2000023 Uniprot:Q9S775
Length = 1384
Score = 346 (126.9 bits), Expect = 4.4e-30, P = 4.4e-30
Identities = 69/125 (55%), Positives = 86/125 (68%)
Query: 37 CGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVL 96
CGKLQ LD ++ KLK GHRVLI+TQ MLD+LE + Y R+DG +RQ+
Sbjct: 594 CGKLQLLDKMMVKLKEQGHRVLIYTQFQHMLDLLEDYCTHKKWQYERIDGKVGGAERQIR 653
Query: 97 MERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRD 155
++RFN ++ FCF+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HR+GQT
Sbjct: 654 IDRFNAKNSNKFCFLLSTRAGGLGINLATADTVIIYDSDWNPHADLQAMARAHRLGQTNK 713
Query: 156 VHIYR 160
V IYR
Sbjct: 714 VMIYR 718
>UNIPROTKB|P51532 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9606
"Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0007399 "nervous system development"
evidence=IEA] [GO:0005515 "protein binding" evidence=IPI]
[GO:0047485 "protein N-terminus binding" evidence=IPI] [GO:0016514
"SWI/SNF complex" evidence=IDA] [GO:0003714 "transcription
corepressor activity" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0071564 "npBAF complex" evidence=ISS;IDA]
[GO:0071565 "nBAF complex" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=IC;IDA] [GO:0001105 "RNA polymerase II
transcription coactivator activity" evidence=IDA] [GO:0000790
"nuclear chromatin" evidence=IDA] [GO:0071778 "WINAC complex"
evidence=IDA] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP;IDA] [GO:0030308 "negative regulation
of cell growth" evidence=IMP] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IGI;IDA]
[GO:0060766 "negative regulation of androgen receptor signaling
pathway" evidence=IMP] [GO:0050681 "androgen receptor binding"
evidence=IPI] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IGI] [GO:0045749 "negative regulation of S phase of
mitotic cell cycle" evidence=TAS] [GO:0070577 "histone
acetyl-lysine binding" evidence=IDA] [GO:0051091 "positive
regulation of sequence-specific DNA binding transcription factor
activity" evidence=IDA] [GO:0002039 "p53 binding" evidence=IPI]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=TAS] [GO:0003713 "transcription
coactivator activity" evidence=IMP;NAS] [GO:0006357 "regulation of
transcription from RNA polymerase II promoter" evidence=NAS]
[GO:0006337 "nucleosome disassembly" evidence=IDA] [GO:0043923
"positive regulation by host of viral transcription" evidence=IMP]
[GO:0030957 "Tat protein binding" evidence=IPI] [GO:0003407 "neural
retina development" evidence=IEP] [GO:0045893 "positive regulation
of transcription, DNA-dependent" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 GO:GO:0005524 GO:GO:0003714 GO:GO:0007399
GO:GO:0051091 GO:GO:0030308 GO:GO:0003677 GO:GO:0006338
GO:GO:0000122 GO:GO:0000790 GO:GO:0071564 GO:GO:0016514
GO:GO:0003407 GO:GO:0071565 GO:GO:0004386 EMBL:CH471106
GO:GO:0001105 GO:GO:0045749 Orphanet:1465 GO:GO:0006337
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633 GO:GO:0070577
InterPro:IPR018359 GO:GO:0071778 KO:K11647 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 EMBL:AC011442 GO:GO:0008094 GO:GO:0060766
GO:GO:0043923 EMBL:AC011485 HOGENOM:HOG000172363 HOVERGEN:HBG056636
CTD:6597 EMBL:U29175 EMBL:D26156 EMBL:AF254822 EMBL:EU430756
EMBL:EU430757 EMBL:EU430758 EMBL:EU430759 EMBL:AC006127
IPI:IPI00293426 IPI:IPI00900285 IPI:IPI00900328 IPI:IPI00900338
IPI:IPI01016040 PIR:S45252 RefSeq:NP_001122316.1
RefSeq:NP_001122317.1 RefSeq:NP_001122318.1 RefSeq:NP_001122319.1
RefSeq:NP_001122320.1 RefSeq:NP_003063.2 UniGene:Hs.327527 PDB:2GRC
PDB:2H60 PDB:3UVD PDBsum:2GRC PDBsum:2H60 PDBsum:3UVD
ProteinModelPortal:P51532 SMR:P51532 DIP:DIP-24249N IntAct:P51532
MINT:MINT-204078 STRING:P51532 PhosphoSite:P51532 DMDM:116242792
PaxDb:P51532 PRIDE:P51532 Ensembl:ENST00000344626
Ensembl:ENST00000413806 Ensembl:ENST00000429416
Ensembl:ENST00000444061 Ensembl:ENST00000450717
Ensembl:ENST00000541122 GeneID:6597 KEGG:hsa:6597 UCSC:uc002mqf.4
GeneCards:GC19P011071 HGNC:HGNC:11100 HPA:CAB004208 MIM:603254
MIM:613325 MIM:614609 neXtProt:NX_P51532 Orphanet:231108
PharmGKB:PA35950 ChiTaRS:SMARCA4 EvolutionaryTrace:P51532
GenomeRNAi:6597 NextBio:25661 ArrayExpress:P51532 Bgee:P51532
CleanEx:HS_SMARCA4 Genevestigator:P51532 GermOnline:ENSG00000127616
Uniprot:P51532
Length = 1647
Score = 347 (127.2 bits), Expect = 4.4e-30, P = 4.4e-30
Identities = 65/124 (52%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A H+VL+F QMT ++ ++E + + G YLRLDGTTK + R +L+
Sbjct: 1080 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 1139
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1140 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1199
Query: 157 HIYR 160
+ R
Sbjct: 1200 RVLR 1203
>UNIPROTKB|Q9HBD4 [details] [associations]
symbol:SMARCA4 "SMARCA4 isoform 2" species:9606 "Homo
sapiens" [GO:0004386 "helicase activity" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0000792 "heterochromatin" evidence=IEA] [GO:0000902 "cell
morphogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0001570 "vasculogenesis" evidence=IEA] [GO:0001832 "blastocyst
growth" evidence=IEA] [GO:0001835 "blastocyst hatching"
evidence=IEA] [GO:0001889 "liver development" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005719 "nuclear
euchromatin" evidence=IEA] [GO:0005726 "perichromatin fibrils"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006346 "methylation-dependent chromatin silencing"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0030198 "extracellular matrix organization"
evidence=IEA] [GO:0030216 "keratinocyte differentiation"
evidence=IEA] [GO:0030900 "forebrain development" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0035116
"embryonic hindlimb morphogenesis" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0043388 "positive regulation of DNA binding" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEA] [GO:0048562 "embryonic organ morphogenesis"
evidence=IEA] [GO:0048730 "epidermis morphogenesis" evidence=IEA]
[GO:0060318 "definitive erythrocyte differentiation" evidence=IEA]
[GO:0060347 "heart trabecula formation" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0071565 "nBAF complex"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
EMBL:CH471106 GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792
GO:GO:0060347 GO:GO:0043966 GO:GO:0043388 KO:K11647
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 EMBL:AC011442
GO:GO:0001835 GO:GO:0007403 GO:GO:0006346 GO:GO:0010424
GO:GO:0060318 GO:GO:0048562 GO:GO:0001832 EMBL:AC011485
GO:GO:0005726 HOGENOM:HOG000172363 HOVERGEN:HBG056636 GO:GO:0035887
CTD:6597 EMBL:AF254822 EMBL:AC006127 UniGene:Hs.327527 GeneID:6597
KEGG:hsa:6597 HGNC:HGNC:11100 PharmGKB:PA35950 ChiTaRS:SMARCA4
GenomeRNAi:6597 NextBio:25661 IPI:IPI00900269 RefSeq:NP_001122321.1
SMR:Q9HBD4 STRING:Q9HBD4 Ensembl:ENST00000358026 UCSC:uc010dxo.3
Uniprot:Q9HBD4
Length = 1679
Score = 347 (127.2 bits), Expect = 4.5e-30, P = 4.5e-30
Identities = 65/124 (52%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A H+VL+F QMT ++ ++E + + G YLRLDGTTK + R +L+
Sbjct: 1080 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 1139
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1140 KTFNEPGSEYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1199
Query: 157 HIYR 160
+ R
Sbjct: 1200 RVLR 1203
>UNIPROTKB|F2Z2R5 [details] [associations]
symbol:CHD5 "Chromodomain-helicase-DNA-binding protein 5"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0008270 "zinc
ion binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 EMBL:AL031847
GO:GO:0008026 InterPro:IPR023780 EMBL:AL035406 HGNC:HGNC:16816
ChiTaRS:CHD5 IPI:IPI00444866 ProteinModelPortal:F2Z2R5 SMR:F2Z2R5
Ensembl:ENST00000496404 ArrayExpress:F2Z2R5 Bgee:F2Z2R5
Uniprot:F2Z2R5
Length = 1225
Score = 345 (126.5 bits), Expect = 4.6e-30, P = 4.6e-30
Identities = 69/118 (58%), Positives = 86/118 (72%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +L+KL+ GHRVLIF+QMT+MLD+LE FL + G+ Y R+DG RQ +
Sbjct: 1024 GKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAI 1083
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTR 154
+RFN A+ FCF+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HRIGQT+
Sbjct: 1084 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQTK 1141
>UNIPROTKB|G4NCV5 [details] [associations]
symbol:MGG_01012 "ISWI chromatin-remodeling complex ATPase
ISW2" species:242507 "Magnaporthe oryzae 70-15" [GO:0008150
"biological_process" evidence=ND] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 EMBL:CM001235 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
SUPFAM:SSF101224 RefSeq:XP_003717932.1 EnsemblFungi:MGG_01012T0
GeneID:2674262 KEGG:mgr:MGG_01012 Uniprot:G4NCV5
Length = 1128
Score = 344 (126.2 bits), Expect = 5.2e-30, P = 5.2e-30
Identities = 67/133 (50%), Positives = 94/133 (70%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D L+ Y+ GK+ LD +L++LKA G RVLIF+QM+R+LD+LE + F + Y R+DG T
Sbjct: 482 DEHLV-YNSGKMVVLDKLLKRLKAQGSRVLIFSQMSRVLDILEDYCVFREYKYSRIDGGT 540
Query: 89 KVDQRQVLMERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRC 147
+ R ++ +N + F F+L+TR+GG+GINLT AD V+ +DSDWNP D QA DR
Sbjct: 541 AHEDRIAAIDEYNKPGSEKFVFLLTTRAGGLGINLTTADIVILFDSDWNPQADLQAMDRA 600
Query: 148 HRIGQTRDVHIYR 160
HRIGQT+ V++YR
Sbjct: 601 HRIGQTKQVYVYR 613
>UNIPROTKB|I3LRQ2 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:CT954235 EMBL:CU466964
Ensembl:ENSSSCT00000027293 Uniprot:I3LRQ2
Length = 1051
Score = 343 (125.8 bits), Expect = 5.8e-30, P = 5.8e-30
Identities = 68/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +L+ G+RVLIF+QM RMLD+L +L + + RLDG+ K + R+ +
Sbjct: 793 GKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 852
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN D + FCF+LSTR+GG+GINL ADTVV +DSDWNP D QAQ R HRIGQ + V
Sbjct: 853 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 912
Query: 157 HIYR 160
+IYR
Sbjct: 913 NIYR 916
>SGD|S000005831 [details] [associations]
symbol:ISW2 "ATP-dependent DNA translocase involved in
chromatin remodeling" species:4932 "Saccharomyces cerevisiae"
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA;IDA;IPI] [GO:0006338 "chromatin remodeling"
evidence=IEA;IGI;IMP;IPI] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0060195 "negative
regulation of antisense RNA transcription" evidence=IGI]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0008623
"CHRAC" evidence=ISS;IPI] [GO:0046020 "negative regulation of
transcription from RNA polymerase II promoter by pheromones"
evidence=IMP] [GO:0006348 "chromatin silencing at telomere"
evidence=IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IMP] [GO:0015616 "DNA
translocase activity" evidence=IDA] [GO:0003697 "single-stranded
DNA binding" evidence=IDA] [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0006369
"termination of RNA polymerase II transcription" evidence=IGI]
[GO:0003676 "nucleic acid binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 SGD:S000005831 GO:GO:0005524 EMBL:BK006948
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0003697
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006348
GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0008623 GO:GO:0006369 GO:GO:0046020 GO:GO:0060195
GO:GO:0015616 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OrthoDB:EOG48SM27 EMBL:Z75212 PIR:S67208
RefSeq:NP_014948.1 ProteinModelPortal:Q08773 SMR:Q08773
DIP:DIP-6603N IntAct:Q08773 MINT:MINT-469536 STRING:Q08773
PaxDb:Q08773 PeptideAtlas:Q08773 PRIDE:Q08773 EnsemblFungi:YOR304W
GeneID:854480 KEGG:sce:YOR304W CYGD:YOR304w OMA:NEQSALS
NextBio:976792 Genevestigator:Q08773 GermOnline:YOR304W
Uniprot:Q08773
Length = 1120
Score = 343 (125.8 bits), Expect = 6.5e-30, P = 6.5e-30
Identities = 66/133 (49%), Positives = 94/133 (70%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D LI ++ GK+ LD +L++LK G RVLIF+QM+R+LD+LE + F Y R+DG+T
Sbjct: 482 DEHLI-FNSGKMIILDKLLKRLKEKGSRVLIFSQMSRLLDILEDYCYFRDFEYCRIDGST 540
Query: 89 KVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRC 147
++R ++ +N ++ F F+L+TR+GG+GINL ADTV+ +DSDWNP D QA DR
Sbjct: 541 SHEERIEAIDEYNKPNSEKFVFLLTTRAGGLGINLVTADTVILFDSDWNPQADLQAMDRA 600
Query: 148 HRIGQTRDVHIYR 160
HRIGQ + VH+YR
Sbjct: 601 HRIGQKKQVHVYR 613
>DICTYBASE|DDB_G0285205 [details] [associations]
symbol:snf2a "SNF2-related protein SNF2a"
species:44689 "Dictyostelium discoideum" [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0044351 "macropinocytosis" evidence=RCA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00384
SMART:SM00490 dictyBase:DDB_G0285205 GO:GO:0005524 GO:GO:0003677
EMBL:AAFI02000075 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 KO:K11647 InterPro:IPR014012
InterPro:IPR006562 Pfam:PF07529 PROSITE:PS51204 RefSeq:XP_638342.2
ProteinModelPortal:Q54NM0 STRING:Q54NM0 PRIDE:Q54NM0
EnsemblProtists:DDB0233441 GeneID:8624967 KEGG:ddi:DDB_G0285205
OMA:HASKHRV Uniprot:Q54NM0
Length = 1604
Score = 345 (126.5 bits), Expect = 6.9e-30, P = 6.9e-30
Identities = 64/124 (51%), Positives = 90/124 (72%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK ++D IL K+ A HRVLIFTQMT +++++E + + +LRLDG+TK ++R L+
Sbjct: 938 GKFDTMDQILTKMHASKHRVLIFTQMTEVINLMEEYFSLKEWTFLRLDGSTKPEERAHLV 997
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+N D+ + F+LST +GG+G+NL ADTV+ +DSDWNP MD QAQDRCHRIGQT V
Sbjct: 998 VEWNRPDSPFWIFVLSTHAGGLGMNLQTADTVIIFDSDWNPQMDLQAQDRCHRIGQTNSV 1057
Query: 157 HIYR 160
++R
Sbjct: 1058 SVFR 1061
>RGD|2323132 [details] [associations]
symbol:LOC100359912 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin a5-like" species:10116
"Rattus norvegicus" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:2323132 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 PROSITE:PS51192
GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 IPI:IPI00390811
Ensembl:ENSRNOT00000031851 Uniprot:F1M7H3
Length = 760
Score = 339 (124.4 bits), Expect = 7.9e-30, P = 7.9e-30
Identities = 69/133 (51%), Positives = 92/133 (69%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D L+ + GK+ LD +L KLK G RVLIF+QMTR+LD+LE + + + Y RLDG T
Sbjct: 196 DMHLVT-NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQT 254
Query: 89 KVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRC 147
D+RQ + +N ++ F F+LSTR+GG+GINL AD V+ YDSDWNP +D QA DR
Sbjct: 255 PHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRA 314
Query: 148 HRIGQTRDVHIYR 160
HRIGQT+ V ++R
Sbjct: 315 HRIGQTKTVRVFR 327
>UNIPROTKB|J9NSS6 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
GeneTree:ENSGT00560000076896 EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000043290 Uniprot:J9NSS6
Length = 1379
Score = 343 (125.8 bits), Expect = 9.1e-30, P = 9.1e-30
Identities = 68/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +L+ G+RVLIF+QM RMLD+L +L + + RLDG+ K + R+ +
Sbjct: 791 GKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 850
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN D + FCF+LSTR+GG+GINL ADTVV +DSDWNP D QAQ R HRIGQ + V
Sbjct: 851 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 910
Query: 157 HIYR 160
+IYR
Sbjct: 911 NIYR 914
>WB|WBGene00002637 [details] [associations]
symbol:let-418 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008270 "zinc ion binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0016818 "hydrolase activity,
acting on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0009792 "embryo development ending in birth or
egg hatching" evidence=IMP] [GO:0040007 "growth" evidence=IMP]
[GO:0002119 "nematode larval development" evidence=IMP] [GO:0000003
"reproduction" evidence=IMP] [GO:0040035 "hermaphrodite genitalia
development" evidence=IMP] [GO:0048557 "embryonic digestive tract
morphogenesis" evidence=IGI] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IDA]
[GO:0000122 "negative regulation of transcription from RNA
polymerase II promoter" evidence=IMP] [GO:0008134 "transcription
factor binding" evidence=IPI] [GO:0016581 "NuRD complex"
evidence=ISS] [GO:0040027 "negative regulation of vulval
development" evidence=IMP] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 344 (126.2 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 69/124 (55%), Positives = 86/124 (69%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK L +LRKLK GGHRVLIF+QMTRMLD++E + G+ Y R+DG+ RQ +
Sbjct: 926 GKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAI 985
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+R+N A+ F F+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HR+GQ V
Sbjct: 986 DRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKV 1045
Query: 157 HIYR 160
IYR
Sbjct: 1046 MIYR 1049
>UNIPROTKB|G5EBZ4 [details] [associations]
symbol:let-418 "Protein let-418" species:6239
"Caenorhabditis elegans" [GO:0005515 "protein binding"
evidence=IPI] InterPro:IPR001841 InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR001965
InterPro:IPR002464 InterPro:IPR012957 InterPro:IPR012958
InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271 Pfam:PF00628
Pfam:PF08073 Pfam:PF08074 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0009792 GO:GO:0040007 GO:GO:0002119 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0000122 GO:GO:0040035
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 InterPro:IPR019786 PROSITE:PS01359 GO:GO:0040027
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0008026 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
GO:GO:0048557 HSSP:Q14839 EMBL:AF308445 EMBL:FO080294 PIR:T34239
RefSeq:NP_504523.1 UniGene:Cel.16862 ProteinModelPortal:G5EBZ4
SMR:G5EBZ4 IntAct:G5EBZ4 STRING:Q19815 EnsemblMetazoa:F26F12.7
GeneID:178970 KEGG:cel:CELE_F26F12.7 CTD:178970 WormBase:F26F12.7
OMA:VTQDATE NextBio:903342 Uniprot:G5EBZ4
Length = 1829
Score = 344 (126.2 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 69/124 (55%), Positives = 86/124 (69%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK L +LRKLK GGHRVLIF+QMTRMLD++E + G+ Y R+DG+ RQ +
Sbjct: 926 GKFVLLQKMLRKLKDGGHRVLIFSQMTRMLDIMEDLCEYEGYRYERIDGSIMGQMRQDAI 985
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+R+N A+ F F+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HR+GQ V
Sbjct: 986 DRYNAPGAQQFIFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRLGQKHKV 1045
Query: 157 HIYR 160
IYR
Sbjct: 1046 MIYR 1049
>FB|FBgn0023395 [details] [associations]
symbol:Chd3 "Chd3" species:7227 "Drosophila melanogaster"
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS;NAS]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS] [GO:0004386 "helicase
activity" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR001965 InterPro:IPR002464 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 EMBL:AE014296 GO:GO:0006355 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0006333
Gene3D:3.30.40.10 InterPro:IPR011011 InterPro:IPR013083
SUPFAM:SSF57903 GO:GO:0004386 InterPro:IPR019786 PROSITE:PS01359
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 GeneTree:ENSGT00560000076896
InterPro:IPR009463 Pfam:PF06465 EMBL:AY071503 EMBL:AF007780
RefSeq:NP_649111.1 ProteinModelPortal:O16102 SMR:O16102
DIP:DIP-21327N MINT:MINT-1651376 STRING:O16102 PaxDb:O16102
EnsemblMetazoa:FBtr0074998 GeneID:40111 KEGG:dme:Dmel_CG9594
UCSC:CG9594-RA CTD:1107 FlyBase:FBgn0023395 InParanoid:O16102
OMA:IKWRDLA OrthoDB:EOG4JH9WN PhylomeDB:O16102 GenomeRNAi:40111
NextBio:817050 Bgee:O16102 GermOnline:CG9594 Uniprot:O16102
Length = 892
Score = 339 (124.4 bits), Expect = 1.1e-29, P = 1.1e-29
Identities = 69/124 (55%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +L++LKA HRVL+F+QMT+ML+VLE FL G+ Y R+DG+ K D RQ +
Sbjct: 586 GKLDLLSKMLKQLKADNHRVLLFSQMTKMLNVLEHFLEGEGYQYDRIDGSIKGDLRQKAI 645
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN + F F+LSTR+GG+GINL ADTV+ +DSDWNP D QA R HR+GQ + V
Sbjct: 646 DRFNDPVSEHFVFLLSTRAGGLGINLATADTVIIFDSDWNPHNDVQAFSRAHRMGQKKKV 705
Query: 157 HIYR 160
IYR
Sbjct: 706 MIYR 709
>POMBASE|SPAC1783.05 [details] [associations]
symbol:hrp1 "ATP-dependent DNA helicase Hrp1"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:0000779 "condensed chromosome, centromeric
region" evidence=IDA] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004003 "ATP-dependent
DNA helicase activity" evidence=ISM] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0006338 "chromatin remodeling"
evidence=IMP] [GO:0006369 "termination of RNA polymerase II
transcription" evidence=IMP] [GO:0007076 "mitotic chromosome
condensation" evidence=IMP] [GO:0008094 "DNA-dependent ATPase
activity" evidence=IDA] [GO:0016592 "mediator complex"
evidence=IPI] [GO:0030466 "chromatin silencing at silent
mating-type cassette" evidence=IMP] [GO:0030702 "chromatin
silencing at centromere" evidence=IMP] [GO:0035067 "negative
regulation of histone acetylation" evidence=IMP] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IMP] [GO:0048096 "chromatin-mediated maintenance
of transcription" evidence=TAS] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 PomBase:SPAC1783.05 Pfam:PF00385 GO:GO:0005524
EMBL:CU329670 GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944
GO:GO:0030466 GO:GO:0000122 GO:GO:0000790 GO:GO:0030702
GO:GO:0004003 GO:GO:0007076 GO:GO:0048096 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0000779 GO:GO:0035067 InterPro:IPR023780
PROSITE:PS00598 GO:GO:0016592 GO:GO:0006369 KO:K11367
HOGENOM:HOG000207917 OrthoDB:EOG4TF3TB EMBL:X99021 EMBL:AB027852
PIR:T43334 PIR:T50107 RefSeq:NP_593660.1 ProteinModelPortal:Q9US25
MINT:MINT-4979817 STRING:Q9US25 EnsemblFungi:SPAC1783.05.1
GeneID:2542363 KEGG:spo:SPAC1783.05 OMA:VERVIKW NextBio:20803422
GO:GO:0060303 Uniprot:Q9US25
Length = 1373
Score = 342 (125.4 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 68/131 (51%), Positives = 91/131 (69%)
Query: 31 RLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKV 90
R I + GK+ LD +L++LK GHRVLIF+QM RML++L +++ G+ Y RLDGT
Sbjct: 697 RGIIMNSGKMVLLDKLLQRLKHDGHRVLIFSQMVRMLNILGEYMSLRGYNYQRLDGTIPA 756
Query: 91 DQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHR 149
R+V ++ FN D+ F F+LSTR+GG+GINL ADTV+ +DSDWNP D QA R HR
Sbjct: 757 SVRRVSIDHFNAPDSPDFVFLLSTRAGGLGINLNTADTVIIFDSDWNPQADLQAMARAHR 816
Query: 150 IGQTRDVHIYR 160
IGQ V++YR
Sbjct: 817 IGQKNHVNVYR 827
>UNIPROTKB|E1C0M8 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0031491 "nucleosome binding" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0000793 "condensed
chromosome" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005677 "chromatin
silencing complex" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IEA]
[GO:0009790 "embryo development" evidence=IEA] [GO:0016584
"nucleosome positioning" evidence=IEA] [GO:0016589 "NURF complex"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0042393 "histone
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0043596 "nuclear replication fork"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0043596 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 EMBL:AADN02016239 EMBL:AADN02016240
IPI:IPI00577188 Ensembl:ENSGALT00000016121 ArrayExpress:E1C0M8
Uniprot:E1C0M8
Length = 1038
Score = 340 (124.7 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 69/133 (51%), Positives = 90/133 (67%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D L+ + GK+ LD +L KLK G RVLIF+QMTR+LD+LE + + + Y RLDG T
Sbjct: 460 DMHLVT-NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQT 518
Query: 89 KVDQRQVLMERFNMDARI-FCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRC 147
D+RQ + +N F F+LSTR+GG+GINL AD V+ YDSDWNP +D QA DR
Sbjct: 519 PHDERQASINAYNEPGSSKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRA 578
Query: 148 HRIGQTRDVHIYR 160
HRIGQT+ V ++R
Sbjct: 579 HRIGQTKTVRVFR 591
>MGI|MGI:1935127 [details] [associations]
symbol:Smarca1 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000733 "DNA strand renaturation" evidence=ISO]
[GO:0000790 "nuclear chromatin" evidence=IDA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISO] [GO:0006338 "chromatin
remodeling" evidence=ISO] [GO:0006351 "transcription,
DNA-dependent" evidence=ISO] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=TAS] [GO:0007420 "brain
development" evidence=ISO;IMP] [GO:0016568 "chromatin modification"
evidence=IEA] [GO:0016589 "NURF complex" evidence=ISO] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0016817 "hydrolase activity,
acting on acid anhydrides" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IMP] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0036310 "annealing helicase activity" evidence=ISO] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISO] [GO:0045893
"positive regulation of transcription, DNA-dependent" evidence=ISO]
[GO:0070615 "nucleosome-dependent ATPase activity" evidence=ISO]
[GO:0090537 "CERF complex" evidence=ISO] [GO:2000177 "regulation of
neural precursor cell proliferation" evidence=IGI;IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 MGI:MGI:1935127 GO:GO:0005524 GO:GO:0005634
GO:GO:0045893 GO:GO:0007420 GO:GO:0030182 GO:GO:0003677
GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016589 GO:GO:0036310 GO:GO:0008094
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 SUPFAM:SSF101224
CTD:6594 HOVERGEN:HBG056329 KO:K11727 EMBL:AF325920 EMBL:AK030741
EMBL:AL671903 EMBL:BC057115 IPI:IPI00314654 IPI:IPI00761324
RefSeq:NP_444353.3 UniGene:Mm.229151 HSSP:Q24368
ProteinModelPortal:Q6PGB8 SMR:Q6PGB8 STRING:Q6PGB8
PhosphoSite:Q6PGB8 PaxDb:Q6PGB8 PRIDE:Q6PGB8
Ensembl:ENSMUST00000077569 Ensembl:ENSMUST00000088973
Ensembl:ENSMUST00000101616 GeneID:93761 KEGG:mmu:93761
UCSC:uc009tbl.2 UCSC:uc009tbm.2 InParanoid:B1AUP6 OrthoDB:EOG44J2H9
NextBio:351647 Bgee:Q6PGB8 Genevestigator:Q6PGB8
GermOnline:ENSMUSG00000031099 Uniprot:Q6PGB8
Length = 1046
Score = 340 (124.7 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 64/124 (51%), Positives = 90/124 (72%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK+ +LD +L ++K G RVLIF+QMTR+LD+LE + + G+ Y RLDG T ++R+ +
Sbjct: 490 GKMVALDKLLARIKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYSRLDGQTPHEEREEAI 549
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN ++ F F+LSTR+GG+GINL AD V+ YDSDWNP +D QA DR HRIGQ + V
Sbjct: 550 DAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKPV 609
Query: 157 HIYR 160
++R
Sbjct: 610 RVFR 613
>UNIPROTKB|J9NX79 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000044612
Uniprot:J9NX79
Length = 1689
Score = 343 (125.8 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 68/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +L+ G+RVLIF+QM RMLD+L +L + + RLDG+ K + R+ +
Sbjct: 760 GKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 819
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN D + FCF+LSTR+GG+GINL ADTVV +DSDWNP D QAQ R HRIGQ + V
Sbjct: 820 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 879
Query: 157 HIYR 160
+IYR
Sbjct: 880 NIYR 883
>UNIPROTKB|F1N052 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 EMBL:DAAA02044371 IPI:IPI00868566 UniGene:Bt.103096
Ensembl:ENSBTAT00000004408 Uniprot:F1N052
Length = 1052
Score = 340 (124.7 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 69/133 (51%), Positives = 92/133 (69%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D L+ + GK+ LD +L KLK G RVLIF+QMTR+LD+LE + + + Y RLDG T
Sbjct: 475 DMHLVT-NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQT 533
Query: 89 KVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRC 147
D+RQ + +N ++ F F+LSTR+GG+GINL AD V+ YDSDWNP +D QA DR
Sbjct: 534 PHDERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRA 593
Query: 148 HRIGQTRDVHIYR 160
HRIGQT+ V ++R
Sbjct: 594 HRIGQTKTVRVFR 606
>UNIPROTKB|E2QWV0 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043596 "nuclear replication fork"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0042393 "histone binding" evidence=IEA]
[GO:0031213 "RSF complex" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=IEA] [GO:0009790
"embryo development" evidence=IEA] [GO:0006352 "DNA-dependent
transcription, initiation" evidence=IEA] [GO:0006334 "nucleosome
assembly" evidence=IEA] [GO:0006302 "double-strand break repair"
evidence=IEA] [GO:0005730 "nucleolus" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0000793 "condensed chromosome" evidence=IEA] [GO:0000183
"chromatin silencing at rDNA" evidence=IEA] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302 GO:GO:0004386
GO:GO:0000793 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0031491 GO:GO:0043044 GO:GO:0016584 GO:GO:0006334
GO:GO:0005677 GO:GO:0016589 GeneTree:ENSGT00680000100002 KO:K11654
SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213 CTD:8467
EMBL:AAEX03010002 RefSeq:XP_532676.1 ProteinModelPortal:E2QWV0
Ensembl:ENSCAFT00000012062 GeneID:475451 KEGG:cfa:475451
NextBio:20851293 Uniprot:E2QWV0
Length = 1052
Score = 340 (124.7 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 69/133 (51%), Positives = 92/133 (69%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D L+ + GK+ LD +L KLK G RVLIF+QMTR+LD+LE + + + Y RLDG T
Sbjct: 475 DMHLVT-NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQT 533
Query: 89 KVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRC 147
D+RQ + +N ++ F F+LSTR+GG+GINL AD V+ YDSDWNP +D QA DR
Sbjct: 534 PHDERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRA 593
Query: 148 HRIGQTRDVHIYR 160
HRIGQT+ V ++R
Sbjct: 594 HRIGQTKTVRVFR 606
>UNIPROTKB|F1RRG9 [details] [associations]
symbol:SMARCA5 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0043596 "nuclear replication fork" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0042393 "histone binding" evidence=IEA] [GO:0031213 "RSF
complex" evidence=IEA] [GO:0016887 "ATPase activity" evidence=IEA]
[GO:0016589 "NURF complex" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0009790 "embryo development"
evidence=IEA] [GO:0006352 "DNA-dependent transcription, initiation"
evidence=IEA] [GO:0006334 "nucleosome assembly" evidence=IEA]
[GO:0006302 "double-strand break repair" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0005677 "chromatin silencing complex"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] [GO:0000793 "condensed chromosome"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0005730 GO:GO:0003677 GO:GO:0006352 GO:GO:0016887
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0009790 GO:GO:0043596
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183 GO:GO:0006302
GO:GO:0004386 GO:GO:0000793 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016584
GO:GO:0006334 GO:GO:0005677 GO:GO:0016589
GeneTree:ENSGT00680000100002 KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR
GO:GO:0031213 CTD:8467 EMBL:CU463195 RefSeq:XP_003129222.2
UniGene:Ssc.97261 Ensembl:ENSSSCT00000009907 GeneID:100188903
KEGG:ssc:100188903 ArrayExpress:F1RRG9 Uniprot:F1RRG9
Length = 1052
Score = 340 (124.7 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 69/133 (51%), Positives = 92/133 (69%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D L+ + GK+ LD +L KLK G RVLIF+QMTR+LD+LE + + + Y RLDG T
Sbjct: 475 DMHLVT-NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQT 533
Query: 89 KVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRC 147
D+RQ + +N ++ F F+LSTR+GG+GINL AD V+ YDSDWNP +D QA DR
Sbjct: 534 PHDERQESINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRA 593
Query: 148 HRIGQTRDVHIYR 160
HRIGQT+ V ++R
Sbjct: 594 HRIGQTKTVRVFR 606
>UNIPROTKB|I3LQZ8 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000025402
Uniprot:I3LQZ8
Length = 1709
Score = 343 (125.8 bits), Expect = 1.2e-29, P = 1.2e-29
Identities = 68/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +L+ G+RVLIF+QM RMLD+L +L + + RLDG+ K + R+ +
Sbjct: 780 GKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 839
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN D + FCF+LSTR+GG+GINL ADTVV +DSDWNP D QAQ R HRIGQ + V
Sbjct: 840 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 899
Query: 157 HIYR 160
+IYR
Sbjct: 900 NIYR 903
>UNIPROTKB|G3MXX3 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:DAAA02051958 Ensembl:ENSBTAT00000065179
Uniprot:G3MXX3
Length = 1810
Score = 343 (125.8 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 68/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +L+ G+RVLIF+QM RMLD+L +L + + RLDG+ K + R+ +
Sbjct: 773 GKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 832
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN D + FCF+LSTR+GG+GINL ADTVV +DSDWNP D QAQ R HRIGQ + V
Sbjct: 833 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 892
Query: 157 HIYR 160
+IYR
Sbjct: 893 NIYR 896
>ZFIN|ZDB-GENE-050419-256 [details] [associations]
symbol:chd2 "chromodomain helicase DNA binding
protein 2" species:7955 "Danio rerio" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 ZFIN:ZDB-GENE-050419-256
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:BX649578 IPI:IPI00999128
Ensembl:ENSDART00000127730 ArrayExpress:E7F7R2 Bgee:E7F7R2
Uniprot:E7F7R2
Length = 1813
Score = 343 (125.8 bits), Expect = 1.3e-29, P = 1.3e-29
Identities = 68/124 (54%), Positives = 90/124 (72%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +LK G+RVLIF+QM RMLD+L +L+ + + RLDG+ K + R+ +
Sbjct: 796 GKLVLLDKLLTRLKDRGNRVLIFSQMVRMLDILADYLSMKRYQFQRLDGSIKGELRKQAL 855
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + + FCF+LSTR+GG+GINL ADTVV +DSDWNP D QAQ R HRIGQ + V
Sbjct: 856 DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 915
Query: 157 HIYR 160
+IYR
Sbjct: 916 NIYR 919
>UNIPROTKB|O14647 [details] [associations]
symbol:CHD2 "Chromodomain-helicase-DNA-binding protein 2"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006357 "regulation of transcription from RNA
polymerase II promoter" evidence=TAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0006357 GO:GO:0004003 EMBL:CH471101
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
EMBL:AF006514 EMBL:BT007050 EMBL:FJ515838 EMBL:AC013394
EMBL:BC007347 EMBL:CR978407 IPI:IPI00023109 IPI:IPI00815893
RefSeq:NP_001036037.1 RefSeq:NP_001262.3 UniGene:Hs.220864
ProteinModelPortal:O14647 SMR:O14647 IntAct:O14647 STRING:O14647
PhosphoSite:O14647 PaxDb:O14647 PRIDE:O14647 DNASU:1106
Ensembl:ENST00000394196 Ensembl:ENST00000420239
Ensembl:ENST00000557381 GeneID:1106 KEGG:hsa:1106 UCSC:uc002bso.1
UCSC:uc002bsp.3 CTD:1106 GeneCards:GC15P093533 HGNC:HGNC:1917
MIM:602119 neXtProt:NX_O14647 PharmGKB:PA26453 InParanoid:O14647
OMA:AHSWCKN OrthoDB:EOG4QRH36 ChiTaRS:CHD2 GenomeRNAi:1106
NextBio:4584 ArrayExpress:O14647 Bgee:O14647 CleanEx:HS_CHD2
Genevestigator:O14647 GermOnline:ENSG00000173575 Uniprot:O14647
Length = 1828
Score = 343 (125.8 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 68/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +L+ G+RVLIF+QM RMLD+L +L + + RLDG+ K + R+ +
Sbjct: 791 GKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 850
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN D + FCF+LSTR+GG+GINL ADTVV +DSDWNP D QAQ R HRIGQ + V
Sbjct: 851 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 910
Query: 157 HIYR 160
+IYR
Sbjct: 911 NIYR 914
>UNIPROTKB|E2R5Z7 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
EMBL:AAEX03002279 EMBL:AAEX03002280 Ensembl:ENSCAFT00000017614
NextBio:20854276 Uniprot:E2R5Z7
Length = 1831
Score = 343 (125.8 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 68/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +L+ G+RVLIF+QM RMLD+L +L + + RLDG+ K + R+ +
Sbjct: 794 GKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 853
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN D + FCF+LSTR+GG+GINL ADTVV +DSDWNP D QAQ R HRIGQ + V
Sbjct: 854 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 913
Query: 157 HIYR 160
+IYR
Sbjct: 914 NIYR 917
>UNIPROTKB|F1SA77 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:CT954235 EMBL:CU466964 Ensembl:ENSSSCT00000002524
Uniprot:F1SA77
Length = 1831
Score = 343 (125.8 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 68/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +L+ G+RVLIF+QM RMLD+L +L + + RLDG+ K + R+ +
Sbjct: 793 GKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 852
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN D + FCF+LSTR+GG+GINL ADTVV +DSDWNP D QAQ R HRIGQ + V
Sbjct: 853 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 912
Query: 157 HIYR 160
+IYR
Sbjct: 913 NIYR 916
>UNIPROTKB|D4AD08 [details] [associations]
symbol:Chd2 "Chromodomain helicase DNA binding protein 2
(Predicted)" species:10116 "Rattus norvegicus" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 EMBL:CH473980
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 KO:K11367 CTD:1106 OrthoDB:EOG4QRH36
IPI:IPI00778855 RefSeq:NP_001100993.1 UniGene:Rn.225034
Ensembl:ENSRNOT00000055829 GeneID:308738 KEGG:rno:308738
RGD:1310056 NextBio:659434 Uniprot:D4AD08
Length = 1834
Score = 343 (125.8 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 68/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +L+ G+RVLIF+QM RMLD+L +L + + RLDG+ K + R+ +
Sbjct: 798 GKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 857
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN D + FCF+LSTR+GG+GINL ADTVV +DSDWNP D QAQ R HRIGQ + V
Sbjct: 858 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 917
Query: 157 HIYR 160
+IYR
Sbjct: 918 NIYR 921
>UNIPROTKB|J9PA90 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AAEX03002279 EMBL:AAEX03002280
Ensembl:ENSCAFT00000045903 Uniprot:J9PA90
Length = 1840
Score = 343 (125.8 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 68/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +L+ G+RVLIF+QM RMLD+L +L + + RLDG+ K + R+ +
Sbjct: 804 GKLILLDKLLTRLRERGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 863
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN D + FCF+LSTR+GG+GINL ADTVV +DSDWNP D QAQ R HRIGQ + V
Sbjct: 864 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 923
Query: 157 HIYR 160
+IYR
Sbjct: 924 NIYR 927
>UNIPROTKB|F1P3Q4 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0006351 "transcription, DNA-dependent" evidence=IEA]
[GO:0007420 "brain development" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0016589 "NURF
complex" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0036310 "annealing helicase activity"
evidence=IEA] [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044
GO:GO:0016589 GO:GO:0008094 GeneTree:ENSGT00680000100002
SUPFAM:SSF101224 OMA:PMSQKRK EMBL:AADN02013587 EMBL:AADN02013588
IPI:IPI00594974 Ensembl:ENSGALT00000013737 Uniprot:F1P3Q4
Length = 982
Score = 339 (124.4 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 67/133 (50%), Positives = 93/133 (69%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D LI + GK+ LD +L KL+ G RVL+F+QMTR+LD+LE + + G+ Y RLDG T
Sbjct: 402 DTHLIT-NSGKMLVLDKLLAKLREQGSRVLLFSQMTRLLDILEDYCMWRGYEYCRLDGQT 460
Query: 89 KVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRC 147
++R+ ++ FN ++ F F+LSTR+GG+GINL AD V+ YDSDWNP +D QA DR
Sbjct: 461 PHEEREEAIDTFNAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRA 520
Query: 148 HRIGQTRDVHIYR 160
HRIGQ + V ++R
Sbjct: 521 HRIGQKKPVRVFR 533
>DICTYBASE|DDB_G0284171 [details] [associations]
symbol:DDB_G0284171 "CHR group protein" species:44689
"Dictyostelium discoideum" [GO:0005634 "nucleus" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA;ISS]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=ISS] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 dictyBase:DDB_G0284171
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006357 EMBL:AAFI02000063 GO:GO:0004003 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR025260 Pfam:PF13907
KO:K11367 RefSeq:XP_638708.1 ProteinModelPortal:Q54Q16
STRING:Q54Q16 EnsemblProtists:DDB0220640 GeneID:8624452
KEGG:ddi:DDB_G0284171 InParanoid:Q54Q16 OMA:DINATEF
ProtClustDB:CLSZ2732060 Uniprot:Q54Q16
Length = 1917
Score = 343 (125.8 bits), Expect = 1.4e-29, P = 1.4e-29
Identities = 68/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +LK GHRVLIF+QM RMLD+L +L + RLDG+ ++R M
Sbjct: 1065 GKLVLLDKLLIRLKETGHRVLIFSQMVRMLDILADYLKGRSFQFQRLDGSMSREKRSQAM 1124
Query: 98 ERFN-MDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN +D+ FCF+LST++GG+GINL+ ADTV+ +DSDWNP D QA+ R HRIGQ V
Sbjct: 1125 DRFNAVDSPDFCFLLSTKAGGLGINLSTADTVIIFDSDWNPQNDLQAEARAHRIGQKNHV 1184
Query: 157 HIYR 160
+IYR
Sbjct: 1185 NIYR 1188
>UNIPROTKB|B5MDZ7 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9606 "Homo sapiens" [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IDA] [GO:0005730 "nucleolus" evidence=IDA]
[GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886 "plasma membrane"
evidence=IDA] InterPro:IPR001650 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 EMBL:AL356378 GO:GO:0003676 GO:GO:0004386
InterPro:IPR002589 PROSITE:PS51154 HGNC:HGNC:1916 ChiTaRS:CHD1L
IPI:IPI00400835 ProteinModelPortal:B5MDZ7 SMR:B5MDZ7 STRING:B5MDZ7
PRIDE:B5MDZ7 Ensembl:ENST00000361293 HOGENOM:HOG000074191
HOVERGEN:HBG104833 ArrayExpress:B5MDZ7 Bgee:B5MDZ7 Uniprot:B5MDZ7
Length = 616
Score = 334 (122.6 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 63/123 (51%), Positives = 90/123 (73%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L L +GGHRVL+F+QMT+MLD+L+ ++++ G+ Y R+DG+ + ++R + +
Sbjct: 66 GKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 125
Query: 98 ERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVH 157
+ F IF F+LSTR+GGVG+NLT ADTV+F DSD+NP D QA R HRIGQ + V
Sbjct: 126 KNFGQQP-IFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVK 184
Query: 158 IYR 160
+ R
Sbjct: 185 VIR 187
>ZFIN|ZDB-GENE-030605-1 [details] [associations]
symbol:smarca4 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 4"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016818 "hydrolase activity, acting on acid anhydrides, in
phosphorus-containing anhydrides" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0031101 "fin regeneration" evidence=IMP] [GO:0003407 "neural
retina development" evidence=IMP] [GO:0007417 "central nervous
system development" evidence=IMP] [GO:0014032 "neural crest cell
development" evidence=IMP] [GO:0060059 "embryonic retina
morphogenesis in camera-type eye" evidence=IMP] [GO:0010842 "retina
layer formation" evidence=IMP] [GO:0021634 "optic nerve formation"
evidence=IMP] [GO:0030182 "neuron differentiation" evidence=IMP]
[GO:0060973 "cell migration involved in heart development"
evidence=IMP] [GO:0001947 "heart looping" evidence=IMP] [GO:0060038
"cardiac muscle cell proliferation" evidence=IMP] [GO:0048596
"embryonic camera-type eye morphogenesis" evidence=IMP] [GO:0000185
"activation of MAPKKK activity" evidence=IMP] InterPro:IPR000330
InterPro:IPR001487 InterPro:IPR001650 InterPro:IPR006576
InterPro:IPR014978 Pfam:PF00176 Pfam:PF00271 Pfam:PF00439
Pfam:PF07533 Pfam:PF08880 PRINTS:PR00503 PROSITE:PS50014
PROSITE:PS51194 SMART:SM00297 SMART:SM00490 SMART:SM00592
SMART:SM00951 ZFIN:ZDB-GENE-030605-1 GO:GO:0005524 GO:GO:0005634
GO:GO:0006355 GO:GO:0030182 GO:GO:0003677 GO:GO:0007417
GO:GO:0004386 GO:GO:0001947 GO:GO:0010842 GO:GO:0014032
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
Gene3D:1.20.920.10 SUPFAM:SSF47370 PROSITE:PS00633
InterPro:IPR018359 GO:GO:0031101 GO:GO:0060038 GO:GO:0048596
KO:K11647 GeneTree:ENSGT00550000074659 InterPro:IPR013999
InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529 SMART:SM00573
PROSITE:PS51204 GO:GO:0060059 GO:GO:0000185 HOGENOM:HOG000172363
HOVERGEN:HBG056636 CTD:6597 OMA:HKPMESM EMBL:BX322663 EMBL:BC163918
EMBL:BC163920 EMBL:AY205256 EMBL:AY218841 IPI:IPI00493397
RefSeq:NP_853634.1 UniGene:Dr.2414 SMR:Q7ZSY3 STRING:Q7ZSY3
Ensembl:ENSDART00000115110 Ensembl:ENSDART00000134514 GeneID:353295
KEGG:dre:353295 InParanoid:Q7ZSY3 NextBio:20812727 GO:GO:0060973
GO:GO:0021634 Uniprot:Q7ZSY3
Length = 1627
Score = 342 (125.4 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 64/124 (51%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A H+VL+F QMT ++ ++E + + YLRLDGTTK + R +L+
Sbjct: 1092 GKFELLDRILPKLRATNHKVLLFCQMTTLMTIMEDYFAYRNFKYLRLDGTTKAEDRGMLL 1151
Query: 98 ERFNMDA-RIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + + F F+LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1152 KNFNDPSHQYFIFLLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEV 1211
Query: 157 HIYR 160
+ R
Sbjct: 1212 RVLR 1215
>UNIPROTKB|J9NRN3 [details] [associations]
symbol:CHD5 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008270
"zinc ion binding" evidence=IEA] [GO:0008026 "ATP-dependent
helicase activity" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012958 InterPro:IPR019787 Pfam:PF00176 Pfam:PF00271
Pfam:PF00628 Pfam:PF08073 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS50016 PROSITE:PS51194 SMART:SM00184 SMART:SM00249
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0006355 GO:GO:0046872 GO:GO:0003677
GO:GO:0008270 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 InterPro:IPR019786
PROSITE:PS01359 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 GeneTree:ENSGT00560000076896 EMBL:AAEX03003895
EMBL:AAEX03003896 EMBL:AAEX03003897 Ensembl:ENSCAFT00000044104
Uniprot:J9NRN3
Length = 1195
Score = 340 (124.7 bits), Expect = 1.5e-29, P = 1.5e-29
Identities = 68/118 (57%), Positives = 85/118 (72%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +L+KL+ GHRVLIF+QMT+MLD+LE FL + G+ Y R+DG RQ +
Sbjct: 998 GKLMLLQKMLKKLRDEGHRVLIFSQMTKMLDLLEDFLEYEGYKYERIDGGITGGLRQEAI 1057
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTR 154
+RFN A+ FCF+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HRIGQ +
Sbjct: 1058 DRFNAPGAQQFCFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQNK 1115
>MGI|MGI:1935129 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0000183 "chromatin silencing at rDNA"
evidence=IDA] [GO:0000793 "condensed chromosome" evidence=ISO]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0003677 "DNA
binding" evidence=ISO] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=ISO] [GO:0005634 "nucleus" evidence=ISO;IDA]
[GO:0005677 "chromatin silencing complex" evidence=IDA] [GO:0006200
"ATP catabolic process" evidence=ISO] [GO:0006302 "double-strand
break repair" evidence=IMP] [GO:0006333 "chromatin assembly or
disassembly" evidence=IDA] [GO:0006334 "nucleosome assembly"
evidence=ISO] [GO:0006338 "chromatin remodeling"
evidence=ISO;IGI;IDA] [GO:0006352 "DNA-dependent transcription,
initiation" evidence=ISO] [GO:0009790 "embryo development"
evidence=IMP] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0016584 "nucleosome positioning" evidence=ISO] [GO:0016589
"NURF complex" evidence=ISO] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0016887 "ATPase activity" evidence=ISO]
[GO:0031213 "RSF complex" evidence=ISO] [GO:0031491 "nucleosome
binding" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=IMP;TAS] InterPro:IPR000330
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR009057
InterPro:IPR015194 InterPro:IPR015195 InterPro:IPR020838
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 Pfam:PF13892
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 SMART:SM00717
MGI:MGI:1935129 GO:GO:0005524 GO:GO:0045893 GO:GO:0005730
GO:GO:0003677 GO:GO:0006352 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0006338 GO:GO:0009790 GO:GO:0043596
GO:GO:0006333 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0000183
GO:GO:0006302 GO:GO:0004386 GO:GO:0000793 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0031491
GO:GO:0043044 GO:GO:0016584 GO:GO:0006334 GO:GO:0005677
GO:GO:0016589 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
KO:K11654 SUPFAM:SSF101224 OMA:EDYCHWR GO:GO:0031213
HOVERGEN:HBG056329 OrthoDB:EOG44J2H9 CTD:8467 EMBL:AF375046
EMBL:AF325921 EMBL:BC021922 EMBL:BC053069 EMBL:AK039811
EMBL:AK052320 IPI:IPI00396739 RefSeq:NP_444354.2 UniGene:Mm.246803
ProteinModelPortal:Q91ZW3 SMR:Q91ZW3 DIP:DIP-36073N IntAct:Q91ZW3
MINT:MINT-1867515 STRING:Q91ZW3 PhosphoSite:Q91ZW3 PaxDb:Q91ZW3
PRIDE:Q91ZW3 Ensembl:ENSMUST00000043359 GeneID:93762 KEGG:mmu:93762
UCSC:uc009mja.1 InParanoid:Q91ZW3 NextBio:351651 Bgee:Q91ZW3
Genevestigator:Q91ZW3 GermOnline:ENSMUSG00000031715 Uniprot:Q91ZW3
Length = 1051
Score = 339 (124.4 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 69/133 (51%), Positives = 92/133 (69%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D L+ + GK+ LD +L KLK G RVLIF+QMTR+LD+LE + + + Y RLDG T
Sbjct: 474 DMHLVT-NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQT 532
Query: 89 KVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRC 147
D+RQ + +N ++ F F+LSTR+GG+GINL AD V+ YDSDWNP +D QA DR
Sbjct: 533 PHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRA 592
Query: 148 HRIGQTRDVHIYR 160
HRIGQT+ V ++R
Sbjct: 593 HRIGQTKTVRVFR 605
>RGD|1308832 [details] [associations]
symbol:Smarca5 "SWI/SNF related, matrix associated, actin
dependent regulator of chromatin, subfamily a, member 5"
species:10116 "Rattus norvegicus" [GO:0000183 "chromatin silencing
at rDNA" evidence=ISO] [GO:0000793 "condensed chromosome"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA;ISO]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA;ISO] [GO:0005634 "nucleus" evidence=IEA;ISO]
[GO:0005677 "chromatin silencing complex" evidence=ISO] [GO:0005730
"nucleolus" evidence=ISO] [GO:0006200 "ATP catabolic process"
evidence=ISO] [GO:0006302 "double-strand break repair"
evidence=ISO] [GO:0006333 "chromatin assembly or disassembly"
evidence=ISO] [GO:0006334 "nucleosome assembly" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006352
"DNA-dependent transcription, initiation" evidence=ISO] [GO:0009790
"embryo development" evidence=ISO] [GO:0016584 "nucleosome
positioning" evidence=ISO] [GO:0016589 "NURF complex" evidence=ISO]
[GO:0016887 "ATPase activity" evidence=ISO] [GO:0031213 "RSF
complex" evidence=ISO] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IEA;ISO] [GO:0045893 "positive regulation of
transcription, DNA-dependent" evidence=ISO] [GO:0043596 "nuclear
replication fork" evidence=ISO] [GO:0042393 "histone binding"
evidence=ISO] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 RGD:1308832 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491 GO:GO:0043044
GeneTree:ENSGT00680000100002 SUPFAM:SSF101224 OMA:EDYCHWR
IPI:IPI00359419 PRIDE:F1LNL2 Ensembl:ENSRNOT00000024568
UCSC:RGD:1308832 ArrayExpress:F1LNL2 Uniprot:F1LNL2
Length = 1051
Score = 339 (124.4 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 69/133 (51%), Positives = 92/133 (69%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D L+ + GK+ LD +L KLK G RVLIF+QMTR+LD+LE + + + Y RLDG T
Sbjct: 474 DMHLVT-NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQT 532
Query: 89 KVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRC 147
D+RQ + +N ++ F F+LSTR+GG+GINL AD V+ YDSDWNP +D QA DR
Sbjct: 533 PHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRA 592
Query: 148 HRIGQTRDVHIYR 160
HRIGQT+ V ++R
Sbjct: 593 HRIGQTKTVRVFR 605
>UNIPROTKB|O60264 [details] [associations]
symbol:SMARCA5 "SWI/SNF-related matrix-associated
actin-dependent regulator of chromatin subfamily A member 5"
species:9606 "Homo sapiens" [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000183 "chromatin silencing at rDNA" evidence=IEA] [GO:0005677
"chromatin silencing complex" evidence=IEA] [GO:0006302
"double-strand break repair" evidence=IEA] [GO:0009790 "embryo
development" evidence=IEA] [GO:0006334 "nucleosome assembly"
evidence=IDA;TAS] [GO:0016887 "ATPase activity" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005634 "nucleus"
evidence=IDA] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006352 "DNA-dependent transcription, initiation" evidence=IDA]
[GO:0016584 "nucleosome positioning" evidence=IDA] [GO:0031213 "RSF
complex" evidence=IPI] [GO:0042393 "histone binding" evidence=IDA]
[GO:0005524 "ATP binding" evidence=IDA] [GO:0000793 "condensed
chromosome" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0016589 "NURF complex" evidence=IDA] [GO:0006357
"regulation of transcription from RNA polymerase II promoter"
evidence=TAS] [GO:0005654 "nucleoplasm" evidence=TAS] [GO:0034080
"CENP-A containing nucleosome assembly at centromere" evidence=TAS]
[GO:0043596 "nuclear replication fork" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IMP] [GO:0006200 "ATP
catabolic process" evidence=IDA] [GO:0005730 "nucleolus"
evidence=IDA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 SMART:SM00717 GO:GO:0005524
Reactome:REACT_115566 GO:GO:0005654 GO:GO:0005730 GO:GO:0003677
GO:GO:0006352 GO:GO:0006357 GO:GO:0016887 Gene3D:1.10.10.60
SUPFAM:SSF46689 GO:GO:0009790 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0000183 GO:GO:0006302 GO:GO:0004386 GO:GO:0000793
GO:GO:0034080 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016584 GO:GO:0005677
GO:GO:0016589 HOGENOM:HOG000192862 KO:K11654 SUPFAM:SSF101224
OMA:EDYCHWR GO:GO:0031213 HOVERGEN:HBG056329 OrthoDB:EOG44J2H9
EMBL:AB010882 EMBL:BC023144 IPI:IPI00297211 RefSeq:NP_003592.3
UniGene:Hs.558422 ProteinModelPortal:O60264 SMR:O60264
IntAct:O60264 MINT:MINT-2981772 STRING:O60264 PhosphoSite:O60264
PaxDb:O60264 PeptideAtlas:O60264 PRIDE:O60264 DNASU:8467
Ensembl:ENST00000283131 GeneID:8467 KEGG:hsa:8467 UCSC:uc003ijg.3
CTD:8467 GeneCards:GC04P144434 HGNC:HGNC:11101 HPA:CAB005227
HPA:HPA008751 MIM:603375 neXtProt:NX_O60264 PharmGKB:PA35951
InParanoid:O60264 PhylomeDB:O60264 GenomeRNAi:8467 NextBio:31688
ArrayExpress:O60264 Bgee:O60264 CleanEx:HS_SMARCA5
Genevestigator:O60264 GermOnline:ENSG00000153147 Uniprot:O60264
Length = 1052
Score = 339 (124.4 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 69/133 (51%), Positives = 92/133 (69%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D L+ + GK+ LD +L KLK G RVLIF+QMTR+LD+LE + + + Y RLDG T
Sbjct: 475 DMHLVT-NSGKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYEYCRLDGQT 533
Query: 89 KVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRC 147
D+RQ + +N ++ F F+LSTR+GG+GINL AD V+ YDSDWNP +D QA DR
Sbjct: 534 PHDERQDSINAYNEPNSTKFVFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRA 593
Query: 148 HRIGQTRDVHIYR 160
HRIGQT+ V ++R
Sbjct: 594 HRIGQTKTVRVFR 606
>UNIPROTKB|E1C1A9 [details] [associations]
symbol:CHD2 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AHSWCKN EMBL:AADN02041467 EMBL:AADN02041468 EMBL:AADN02041469
EMBL:AADN02041470 IPI:IPI00575702 Ensembl:ENSGALT00000011260
Uniprot:E1C1A9
Length = 1727
Score = 342 (125.4 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 68/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +L+ G+RVLIF+QM RMLD+L +L + + RLDG+ K + R+ +
Sbjct: 793 GKLILLDKLLTRLRDRGNRVLIFSQMVRMLDILAEYLTIKHYPFQRLDGSIKGEIRKQAL 852
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN D + FCF+LSTR+GG+GINL ADTVV +DSDWNP D QAQ R HRIGQ + V
Sbjct: 853 DHFNADGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 912
Query: 157 HIYR 160
+IYR
Sbjct: 913 NIYR 916
>UNIPROTKB|F1NVT7 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00818616
Ensembl:ENSGALT00000040615 ArrayExpress:F1NVT7 Uniprot:F1NVT7
Length = 1257
Score = 340 (124.7 bits), Expect = 1.6e-29, P = 1.6e-29
Identities = 67/124 (54%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KL AGGH+VLIF+QM R LD+LE +L + Y R+DG + + RQ +
Sbjct: 705 GKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAI 764
Query: 98 ERF-NMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 765 DRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 824
Query: 157 HIYR 160
+YR
Sbjct: 825 KVYR 828
>UNIPROTKB|E1BS48 [details] [associations]
symbol:CHD9 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 OMA:MWGHQTA EMBL:AADN02038292
EMBL:AADN02038293 EMBL:AADN02038294 EMBL:AADN02038295
EMBL:AADN02038296 EMBL:AADN02038297 EMBL:AADN02038298
IPI:IPI00579055 Ensembl:ENSGALT00000005902 Uniprot:E1BS48
Length = 2614
Score = 344 (126.2 bits), Expect = 1.7e-29, P = 1.7e-29
Identities = 69/131 (52%), Positives = 93/131 (70%)
Query: 32 LIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVD 91
+IQ GKL +D +L K+KAGGH+VLIF+QM R LD+LE +L ++Y R+DG + +
Sbjct: 1174 MIQ-SAGKLVLIDKLLPKMKAGGHKVLIFSQMVRCLDILEDYLIHKRYLYERIDGRVRGN 1232
Query: 92 QRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQ-AQDRCHR 149
RQ ++RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP D Q AQ RCHR
Sbjct: 1233 LRQAAIDRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQKAQARCHR 1292
Query: 150 IGQTRDVHIYR 160
IGQ + V +YR
Sbjct: 1293 IGQNKAVKVYR 1303
>FB|FBgn0250786 [details] [associations]
symbol:Chd1 "Chromodomain-helicase-DNA-binding protein 1"
species:7227 "Drosophila melanogaster" [GO:0005705 "polytene
chromosome interband" evidence=IDA] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0003682 "chromatin binding" evidence=IDA]
[GO:0005703 "polytene chromosome puff" evidence=IDA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0035042 "fertilization,
exchange of chromosomal proteins" evidence=IMP] [GO:0048477
"oogenesis" evidence=IMP] [GO:0007476 "imaginal disc-derived wing
morphogenesis" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
EMBL:AE014134 GO:GO:0006355 GO:GO:0003677 GO:GO:0048477
GO:GO:0006351 GO:GO:0003682 GO:GO:0004386 GO:GO:0007476
InterPro:IPR016197 SUPFAM:SSF54160 HSSP:Q97XQ5 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598 GO:GO:0005703
InterPro:IPR025260 Pfam:PF13907 EMBL:L77907 PIR:T13944
RefSeq:NP_477197.1 ProteinModelPortal:Q7KU24 SMR:Q7KU24
STRING:Q7KU24 PaxDb:Q7KU24 PRIDE:Q7KU24 EnsemblMetazoa:FBtr0077674
GeneID:33505 KEGG:dme:Dmel_CG3733 UCSC:CG3733-RA CTD:1105
FlyBase:FBgn0250786 GeneTree:ENSGT00560000076896 InParanoid:Q7KU24
KO:K11367 OrthoDB:EOG45MKM5 PhylomeDB:Q7KU24 ChiTaRS:CHD1
GenomeRNAi:33505 NextBio:783939 Bgee:Q7KU24 GO:GO:0005705
GO:GO:0035042 Uniprot:Q7KU24
Length = 1883
Score = 342 (125.4 bits), Expect = 1.8e-29, P = 1.8e-29
Identities = 69/124 (55%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +LK GHRVLIF+QM RMLDVL +L + RLDG+ K + R+ +
Sbjct: 836 GKLVLLDKLLCRLKETGHRVLIFSQMVRMLDVLADYLQKRHFPFQRLDGSIKGEMRRQAL 895
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + ++ FCF+LSTR+GG+GINL ADTV+ +DSDWNP D QAQ R HRIGQ V
Sbjct: 896 DHFNAEGSQDFCFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAQARAHRIGQKNQV 955
Query: 157 HIYR 160
+IYR
Sbjct: 956 NIYR 959
>GENEDB_PFALCIPARUM|PF11_0053 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:5833
"Plasmodium falciparum" [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] [GO:0006355 "regulation of transcription,
DNA-dependent" evidence=ISS] [GO:0008026 "ATP-dependent helicase
activity" evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 340 (124.7 bits), Expect = 2.0e-29, P = 2.0e-29
Identities = 64/124 (51%), Positives = 92/124 (74%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK+ LD +L +LK RVL+F+QMTR+LD+++ + + + YLR+DG+T D+RQV +
Sbjct: 626 GKMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPGDERQVRI 685
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+FN +++ F F+LSTR+GG+GINLT AD V+ +DSD+NP MD QA DR HRIGQ + V
Sbjct: 686 NQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRIGQKKRV 745
Query: 157 HIYR 160
+YR
Sbjct: 746 IVYR 749
>UNIPROTKB|Q8IIW0 [details] [associations]
symbol:PF11_0053 "PfSNF2L" species:36329 "Plasmodium
falciparum 3D7" [GO:0006338 "chromatin remodeling" evidence=ISS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=ISS] [GO:0008026 "ATP-dependent helicase activity"
evidence=ISS] [GO:0008094 "DNA-dependent ATPase activity"
evidence=ISS] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0006355 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0006338 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0008026
EMBL:AE014186 GO:GO:0008094 KO:K01509 RefSeq:XP_001347729.1
ProteinModelPortal:Q8IIW0 IntAct:Q8IIW0 MINT:MINT-1585538
EnsemblProtists:PF11_0053:mRNA GeneID:810605 KEGG:pfa:PF11_0053
EuPathDB:PlasmoDB:PF3D7_1104200 HOGENOM:HOG000282197
ProtClustDB:CLSZ2444952 Uniprot:Q8IIW0
Length = 1426
Score = 340 (124.7 bits), Expect = 2.0e-29, P = 2.0e-29
Identities = 64/124 (51%), Positives = 92/124 (74%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK+ LD +L +LK RVL+F+QMTR+LD+++ + + + YLR+DG+T D+RQV +
Sbjct: 626 GKMSLLDKLLPRLKKENSRVLLFSQMTRLLDIIDDYCRWKNYPYLRIDGSTPGDERQVRI 685
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+FN +++ F F+LSTR+GG+GINLT AD V+ +DSD+NP MD QA DR HRIGQ + V
Sbjct: 686 NQFNEPNSKYFIFLLSTRAGGIGINLTTADIVILFDSDYNPQMDIQAMDRAHRIGQKKRV 745
Query: 157 HIYR 160
+YR
Sbjct: 746 IVYR 749
>ZFIN|ZDB-GENE-091113-61 [details] [associations]
symbol:si:dkey-76p7.6 "si:dkey-76p7.6" species:7955
"Danio rerio" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0000729 "DNA double-strand break processing" evidence=ISS]
[GO:0035861 "site of double-strand break" evidence=ISS] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0000166
"nucleotide binding" evidence=IEA] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016568 "chromatin modification" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0005694 "chromosome" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-091113-61 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0043044 SUPFAM:SSF46934
GO:GO:0000729 GO:GO:0035861 GeneTree:ENSGT00630000089890
EMBL:BX927385 IPI:IPI00901431 Ensembl:ENSDART00000113101
Bgee:E7F1C4 Uniprot:E7F1C4
Length = 954
Score = 337 (123.7 bits), Expect = 2.1e-29, P = 2.1e-29
Identities = 65/125 (52%), Positives = 86/125 (68%)
Query: 36 DCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQV 95
D GKL L +L LK G RV++F+Q T MLD+LE FL H H Y RLDG+T + R
Sbjct: 780 DSGKLSLLTQLLNSLKEKGDRVVLFSQFTMMLDILEVFLRHHKHRYNRLDGSTPMSDRIG 839
Query: 96 LMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRD 155
L+++FN D IF F+LSTR+GG+GINLT A+ V+ +D D NP D QA+ RCHR+GQT+
Sbjct: 840 LIDQFNTDQDIFVFLLSTRAGGLGINLTSANVVILHDIDCNPYNDKQAEGRCHRVGQTKT 899
Query: 156 VHIYR 160
V + +
Sbjct: 900 VKVIK 904
>ZFIN|ZDB-GENE-021125-1 [details] [associations]
symbol:smarca5 "SWI/SNF related, matrix associated,
actin dependent regulator of chromatin, subfamily a, member 5"
species:7955 "Danio rerio" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0016818 "hydrolase activity, acting on
acid anhydrides, in phosphorus-containing anhydrides" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IMP]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
Pfam:PF00176 Pfam:PF00271 Pfam:PF09110 Pfam:PF09111 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 ZFIN:ZDB-GENE-021125-1 GO:GO:0005524
GO:GO:0003677 Gene3D:1.10.10.60 SUPFAM:SSF46689 GO:GO:0060041
InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 OMA:EDYCHWR HOVERGEN:HBG056329 EMBL:CU550733
IPI:IPI00619566 UniGene:Dr.76168 Ensembl:ENSDART00000123972
ArrayExpress:B8A552 Bgee:B8A552 Uniprot:B8A552
Length = 1035
Score = 337 (123.7 bits), Expect = 2.5e-29, P = 2.5e-29
Identities = 66/124 (53%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK+ LD +L KLK G RVLIF+QMTR+LD+LE + + + Y RLDG T ++RQ+ +
Sbjct: 466 GKMVVLDKLLPKLKEQGSRVLIFSQMTRVLDILEDYCMWRNYGYCRLDGQTPHEERQISI 525
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
FN ++ F F+LSTR+GG+GINL AD V+ YDSDWNP +D QA DR HRIGQ + V
Sbjct: 526 NAFNEPNSSKFLFMLSTRAGGLGINLATADVVIIYDSDWNPQVDLQAMDRAHRIGQKKQV 585
Query: 157 HIYR 160
++R
Sbjct: 586 RVFR 589
>UNIPROTKB|F1RT88 [details] [associations]
symbol:CHD7 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0060324 "face development" evidence=IEA] [GO:0060123
"regulation of growth hormone secretion" evidence=IEA] [GO:0060041
"retina development in camera-type eye" evidence=IEA] [GO:0060021
"palate development" evidence=IEA] [GO:0050890 "cognition"
evidence=IEA] [GO:0048844 "artery morphogenesis" evidence=IEA]
[GO:0048752 "semicircular canal morphogenesis" evidence=IEA]
[GO:0043584 "nose development" evidence=IEA] [GO:0040018 "positive
regulation of multicellular organism growth" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030540 "female genitalia development" evidence=IEA]
[GO:0030217 "T cell differentiation" evidence=IEA] [GO:0021545
"cranial nerve development" evidence=IEA] [GO:0008015 "blood
circulation" evidence=IEA] [GO:0007628 "adult walking behavior"
evidence=IEA] [GO:0007605 "sensory perception of sound"
evidence=IEA] [GO:0007512 "adult heart development" evidence=IEA]
[GO:0007417 "central nervous system development" evidence=IEA]
[GO:0003007 "heart morphogenesis" evidence=IEA] [GO:0001701 "in
utero embryonic development" evidence=IEA] [GO:0001501 "skeletal
system development" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0008015
GO:GO:0003007 GO:GO:0050890 GO:GO:0001701 GO:GO:0040018
GO:GO:0007417 GO:GO:0003682 GO:GO:0001501 GO:GO:0060041
GO:GO:0007605 GO:GO:0007512 GO:GO:0004386 GO:GO:0035116
GO:GO:0060324 GO:GO:0060021 GO:GO:0048844 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0030540 GO:GO:0007628 GO:GO:0030217 GO:GO:0048752
InterPro:IPR023780 OMA:TFGVIFD GO:GO:0021545 GO:GO:0043584
GO:GO:0060123 GeneTree:ENSGT00560000077077 EMBL:CU179734
Ensembl:ENSSSCT00000006828 Uniprot:F1RT88
Length = 2991
Score = 343 (125.8 bits), Expect = 2.5e-29, P = 2.5e-29
Identities = 70/126 (55%), Positives = 91/126 (72%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KLKAGGHRVLIF+QM R LD+LE +L + Y R+DG + + RQ +
Sbjct: 1283 GKLVLIDKLLPKLKAGGHRVLIFSQMVRCLDILEDYLIQRRYPYERIDGRVRGNLRQAAI 1342
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDA--QAQDRCHRIGQTR 154
+RF+ D+ F F+L TR+GG+GINLT ADT + +DSDWNP M + QAQ RCHRIGQ++
Sbjct: 1343 DRFSKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPKMISSFQAQARCHRIGQSK 1402
Query: 155 DVHIYR 160
V IYR
Sbjct: 1403 SVKIYR 1408
>UNIPROTKB|F1NAD2 [details] [associations]
symbol:SMARCAD1 "Uncharacterized protein" species:9031
"Gallus gallus" [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0000018 "regulation of
DNA recombination" evidence=IEA] [GO:0000729 "DNA double-strand
break processing" evidence=IEA] [GO:0000792 "heterochromatin"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0035861
"site of double-strand break" evidence=IEA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=IEA] [GO:0043596
"nuclear replication fork" evidence=IEA] [GO:0051304 "chromosome
separation" evidence=IEA] [GO:0070932 "histone H3 deacetylation"
evidence=IEA] [GO:0070933 "histone H4 deacetylation" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR003892
InterPro:IPR009060 Pfam:PF00176 Pfam:PF00271 PROSITE:PS51140
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0003677
GO:GO:0043596 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 SUPFAM:SSF46934 GO:GO:0000792 GO:GO:0070932
GO:GO:0070933 GO:GO:0000018 GeneTree:ENSGT00630000089890
GO:GO:0051304 OMA:KNQRGIQ EMBL:AADN02016061 EMBL:AADN02016062
EMBL:AADN02016063 EMBL:AADN02016064 EMBL:AADN02016065
EMBL:AADN02016066 EMBL:AADN02016067 IPI:IPI00583150
Ensembl:ENSGALT00000016936 Uniprot:F1NAD2
Length = 963
Score = 336 (123.3 bits), Expect = 2.8e-29, P = 2.8e-29
Identities = 63/125 (50%), Positives = 88/125 (70%)
Query: 36 DCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQV 95
D GK + L+ +L LK G RV++F+Q T +LD+LE FL H Y+RLDG T++ R
Sbjct: 789 DSGKFRVLERLLSDLKEKGDRVVLFSQFTMVLDILEVFLKHWQHRYIRLDGKTQISDRIH 848
Query: 96 LMERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRD 155
L++ FN D IF F+LST++GG+GINLT A+ V+ +D D NP D QA+DRCHR+GQTR+
Sbjct: 849 LIDEFNTDMDIFVFLLSTKAGGLGINLTSANVVILHDIDCNPYNDKQAEDRCHRVGQTRE 908
Query: 156 VHIYR 160
V + +
Sbjct: 909 VKVIK 913
>UNIPROTKB|F1NLW6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
GeneTree:ENSGT00560000077077 EMBL:AADN02019534 EMBL:AADN02019532
EMBL:AADN02019533 IPI:IPI00572954 Ensembl:ENSGALT00000002030
ArrayExpress:F1NLW6 Uniprot:F1NLW6
Length = 2005
Score = 340 (124.7 bits), Expect = 3.2e-29, P = 3.2e-29
Identities = 67/124 (54%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KL AGGH+VLIF+QM R LD+LE +L + Y R+DG + + RQ +
Sbjct: 580 GKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAI 639
Query: 98 ERF-NMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 640 DRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 699
Query: 157 HIYR 160
+YR
Sbjct: 700 KVYR 703
>UNIPROTKB|F1NLV5 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271 Pfam:PF07533
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00592 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
OMA:CKWATME GeneTree:ENSGT00560000077077 EMBL:AADN02019534
EMBL:AADN02019532 EMBL:AADN02019533 IPI:IPI00588365
Ensembl:ENSGALT00000002034 ArrayExpress:F1NLV5 Uniprot:F1NLV5
Length = 2007
Score = 340 (124.7 bits), Expect = 3.2e-29, P = 3.2e-29
Identities = 67/124 (54%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KL AGGH+VLIF+QM R LD+LE +L + Y R+DG + + RQ +
Sbjct: 580 GKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAI 639
Query: 98 ERF-NMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 640 DRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 699
Query: 157 HIYR 160
+YR
Sbjct: 700 KVYR 703
>TAIR|locus:2116747 [details] [associations]
symbol:PKR2 "PICKLE RELATED 2" species:3702 "Arabidopsis
thaliana" [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=ISM;IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:CP002687
GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR009462 InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465
IPI:IPI00523018 RefSeq:NP_194918.2 UniGene:At.54572
ProteinModelPortal:F4JTF6 SMR:F4JTF6 PRIDE:F4JTF6
EnsemblPlants:AT4G31900.1 GeneID:829320 KEGG:ath:AT4G31900
OMA:SYWESES ArrayExpress:F4JTF6 Uniprot:F4JTF6
Length = 1202
Score = 337 (123.7 bits), Expect = 3.2e-29, P = 3.2e-29
Identities = 68/124 (54%), Positives = 84/124 (67%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKLQ LD ++ KLK GHRVLI+TQ L +LE + F Y R+DG +RQV +
Sbjct: 524 GKLQLLDKMMVKLKEQGHRVLIYTQFQHTLYLLEDYFTFKNWNYERIDGKISGPERQVRI 583
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN + + FCF+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HR+GQT V
Sbjct: 584 DRFNAENSNRFCFLLSTRAGGIGINLATADTVIIYDSDWNPHADLQAMARVHRLGQTNKV 643
Query: 157 HIYR 160
IYR
Sbjct: 644 MIYR 647
>UNIPROTKB|O14646 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0035064 "methylated histone residue
binding" evidence=IDA] [GO:0004003 "ATP-dependent DNA helicase
activity" evidence=TAS] [GO:0006357 "regulation of transcription
from RNA polymerase II promoter" evidence=TAS] [GO:0005515 "protein
binding" evidence=IPI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0005737
GO:GO:0003677 GO:GO:0006357 GO:GO:0006351 GO:GO:0006338
GO:GO:0004003 GO:GO:0035064 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
HOVERGEN:HBG005325 InterPro:IPR025260 Pfam:PF13907 CTD:1105
KO:K11367 EMBL:AF006513 EMBL:AC022121 EMBL:BC117134 IPI:IPI00297851
IPI:IPI00954192 RefSeq:NP_001261.2 UniGene:Hs.643465 PDB:2B2T
PDB:2B2U PDB:2B2V PDB:2B2W PDB:2B2Y PDB:4B4C PDBsum:2B2T
PDBsum:2B2U PDBsum:2B2V PDBsum:2B2W PDBsum:2B2Y PDBsum:4B4C
ProteinModelPortal:O14646 SMR:O14646 IntAct:O14646 STRING:O14646
PhosphoSite:O14646 PaxDb:O14646 PRIDE:O14646
Ensembl:ENST00000284049 GeneID:1105 KEGG:hsa:1105 UCSC:uc003knf.3
GeneCards:GC05M098219 H-InvDB:HIX0005061 HGNC:HGNC:1915
HPA:HPA022236 MIM:602118 neXtProt:NX_O14646 PharmGKB:PA26451
HOGENOM:HOG000207917 InParanoid:O14646 OMA:AETHENE
OrthoDB:EOG4PG601 PhylomeDB:O14646 DrugBank:DB00445
EvolutionaryTrace:O14646 GenomeRNAi:1105 NextBio:4580
ArrayExpress:O14646 Bgee:O14646 CleanEx:HS_CHD1
Genevestigator:O14646 GermOnline:ENSG00000153922 Uniprot:O14646
Length = 1710
Score = 339 (124.4 bits), Expect = 3.3e-29, P = 3.3e-29
Identities = 67/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +L+ G+RVLIF+QM RMLD+L +L + + RLDG+ K + R+ +
Sbjct: 788 GKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQAL 847
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + + FCF+LSTR+GG+GINL ADTVV +DSDWNP D QAQ R HRIGQ + V
Sbjct: 848 DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 907
Query: 157 HIYR 160
+IYR
Sbjct: 908 NIYR 911
>UNIPROTKB|E2QUI5 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 EMBL:AAEX03002026
RefSeq:XP_848459.1 Ensembl:ENSCAFT00000012332 GeneID:488891
KEGG:cfa:488891 NextBio:20862162 Uniprot:E2QUI5
Length = 1711
Score = 339 (124.4 bits), Expect = 3.3e-29, P = 3.3e-29
Identities = 67/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +L+ G+RVLIF+QM RMLD+L +L + + RLDG+ K + R+ +
Sbjct: 787 GKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQAL 846
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + + FCF+LSTR+GG+GINL ADTVV +DSDWNP D QAQ R HRIGQ + V
Sbjct: 847 DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 906
Query: 157 HIYR 160
+IYR
Sbjct: 907 NIYR 910
>MGI|MGI:88393 [details] [associations]
symbol:Chd1 "chromodomain helicase DNA binding protein 1"
species:10090 "Mus musculus" [GO:0000166 "nucleotide binding"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=NAS] [GO:0004386 "helicase activity"
evidence=NAS] [GO:0005524 "ATP binding" evidence=IEA] [GO:0005634
"nucleus" evidence=NAS] [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0006333 "chromatin assembly or disassembly" evidence=NAS]
[GO:0006338 "chromatin remodeling" evidence=IGI] [GO:0006351
"transcription, DNA-dependent" evidence=IEA] [GO:0006355
"regulation of transcription, DNA-dependent" evidence=IEA]
[GO:0016568 "chromatin modification" evidence=IEA] [GO:0016787
"hydrolase activity" evidence=IEA] [GO:0035064 "methylated histone
residue binding" evidence=ISO] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 MGI:MGI:88393 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0006355 GO:GO:0003677
GO:GO:0006351 GO:GO:0003682 GO:GO:0006338 GO:GO:0006333
GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 CTD:1105
GeneTree:ENSGT00560000076896 KO:K11367 HOGENOM:HOG000207917
OMA:AETHENE OrthoDB:EOG4PG601 EMBL:L10410 EMBL:CH466630
EMBL:BC115822 IPI:IPI00107999 PIR:A47392 RefSeq:NP_031716.2
UniGene:Mm.8137 ProteinModelPortal:P40201 SMR:P40201 IntAct:P40201
STRING:P40201 PhosphoSite:P40201 PaxDb:P40201 PRIDE:P40201
Ensembl:ENSMUST00000024627 GeneID:12648 KEGG:mmu:12648
InParanoid:Q14BJ0 NextBio:281852 Bgee:P40201 CleanEx:MM_CHD1
Genevestigator:P40201 GermOnline:ENSMUSG00000023852 Uniprot:P40201
Length = 1711
Score = 339 (124.4 bits), Expect = 3.3e-29, P = 3.3e-29
Identities = 67/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +L+ G+RVLIF+QM RMLD+L +L + + RLDG+ K + R+ +
Sbjct: 786 GKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQAL 845
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + + FCF+LSTR+GG+GINL ADTVV +DSDWNP D QAQ R HRIGQ + V
Sbjct: 846 DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 905
Query: 157 HIYR 160
+IYR
Sbjct: 906 NIYR 909
>UNIPROTKB|B6ZLK2 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0000775
"chromosome, centromeric region" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0000775 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 EMBL:AB465210 IPI:IPI00573130 UniGene:Gga.4301
UniGene:Gga.8463 STRING:B6ZLK2 HOVERGEN:HBG005325
InterPro:IPR025260 Pfam:PF13907 Uniprot:B6ZLK2
Length = 1719
Score = 339 (124.4 bits), Expect = 3.3e-29, P = 3.3e-29
Identities = 67/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +L+ G+RVLIF+QM RMLD+L +L + + RLDG+ K + R+ +
Sbjct: 784 GKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQAL 843
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + + FCF+LSTR+GG+GINL ADTVV +DSDWNP D QAQ R HRIGQ + V
Sbjct: 844 DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 903
Query: 157 HIYR 160
+IYR
Sbjct: 904 NIYR 907
>UNIPROTKB|E2QVR5 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9615
"Canis lupus familiaris" [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 GO:GO:0005524 GO:GO:0003677 Gene3D:1.10.10.60
SUPFAM:SSF46689 InterPro:IPR017884 PROSITE:PS51293 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0016585
GO:GO:0031491 GO:GO:0043044 SUPFAM:SSF101224
Ensembl:ENSCAFT00000029649 Uniprot:E2QVR5
Length = 1073
Score = 336 (123.3 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 68/135 (50%), Positives = 93/135 (68%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D ++ + GK+ LD +L KLK G RVLIF+QMTR+LD+LE + + G+ Y RLDG T
Sbjct: 491 DEHIVS-NSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQT 549
Query: 89 KVDQRQV--LMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQD 145
++R+ +E FN ++ F F+LSTR+GG+GINL AD V+ YDSDWNP +D QA D
Sbjct: 550 PHEEREKKEAIEAFNAPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMD 609
Query: 146 RCHRIGQTRDVHIYR 160
R HRIGQ + V ++R
Sbjct: 610 RAHRIGQKKPVRVFR 624
>SGD|S000000966 [details] [associations]
symbol:CHD1 "Chromatin remodeler that regulates various
aspects of transcription" species:4932 "Saccharomyces cerevisiae"
[GO:0030874 "nucleolar chromatin" evidence=IDA] [GO:0042766
"nucleosome mobilization" evidence=IDA] [GO:0000182 "rDNA binding"
evidence=IDA] [GO:0005739 "mitochondrion" evidence=IDA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IDA] [GO:0000124 "SAGA complex" evidence=IDA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IDA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IGI;IMP] [GO:0043044 "ATP-dependent chromatin remodeling"
evidence=IDA] [GO:0001178 "regulation of transcriptional start site
selection at RNA polymerase II promoter" evidence=IGI] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IMP]
[GO:0071441 "negative regulation of histone H3-K14 acetylation"
evidence=IMP] [GO:0006368 "transcription elongation from RNA
polymerase II promoter" evidence=IGI;IPI] [GO:0000790 "nuclear
chromatin" evidence=IDA] [GO:0031490 "chromatin DNA binding"
evidence=IDA] [GO:0016584 "nucleosome positioning"
evidence=IGI;IDA] [GO:0003677 "DNA binding" evidence=IEA;IDA]
[GO:0006369 "termination of RNA polymerase II transcription"
evidence=IGI;IMP] [GO:0071894 "histone H2B conserved C-terminal
lysine ubiquitination" evidence=IMP] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0006355 "regulation of
transcription, DNA-dependent" evidence=IEA] [GO:0016568 "chromatin
modification" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0000166 "nucleotide binding" evidence=IEA]
[GO:0035064 "methylated histone residue binding" evidence=IDA]
[GO:2000104 "negative regulation of DNA-dependent DNA replication"
evidence=IGI] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IGI] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR009057 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SGD:S000000966 Pfam:PF00385 GO:GO:0005739
GO:GO:0005524 GO:GO:2000104 Gene3D:1.10.10.60 SUPFAM:SSF46689
EMBL:BK006939 GO:GO:0000124 GO:GO:0046695 GO:GO:0004386
GO:GO:0034401 GO:GO:0006368 GO:GO:0035064 GO:GO:0031490
GO:GO:0042766 InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0043044
GO:GO:0016584 EMBL:U18917 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 GO:GO:0006363 GO:GO:0008094 GO:GO:0006369
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 PIR:S30818 RefSeq:NP_011091.1
PDB:2DY7 PDB:2DY8 PDB:2H1E PDB:2XB0 PDB:3MWY PDB:3TED PDBsum:2DY7
PDBsum:2DY8 PDBsum:2H1E PDBsum:2XB0 PDBsum:3MWY PDBsum:3TED
ProteinModelPortal:P32657 SMR:P32657 DIP:DIP-6362N IntAct:P32657
MINT:MINT-618890 STRING:P32657 PaxDb:P32657 PeptideAtlas:P32657
EnsemblFungi:YER164W GeneID:856911 KEGG:sce:YER164W CYGD:YER164w
OMA:IKWQFMA OrthoDB:EOG4TF3TB SABIO-RK:P32657
EvolutionaryTrace:P32657 NextBio:983353 Genevestigator:P32657
GermOnline:YER164W GO:GO:0030874 GO:GO:0000182 GO:GO:0071441
GO:GO:2000616 GO:GO:0001178 Uniprot:P32657
Length = 1468
Score = 338 (124.0 bits), Expect = 3.4e-29, P = 3.4e-29
Identities = 68/124 (54%), Positives = 86/124 (69%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK+ LD +L +LK GHRVLIF+QM RMLD+L +L+ G + RLDGT QR++ +
Sbjct: 695 GKMVLLDQLLTRLKKDGHRVLIFSQMVRMLDILGDYLSIKGINFQRLDGTVPSAQRRISI 754
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN D+ F F+LSTR+GG+GINL ADTVV +DSDWNP D QA R HRIGQ V
Sbjct: 755 DHFNSPDSNDFVFLLSTRAGGLGINLMTADTVVIFDSDWNPQADLQAMARAHRIGQKNHV 814
Query: 157 HIYR 160
+YR
Sbjct: 815 MVYR 818
>UNIPROTKB|J9P6Y8 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
OMA:AETHENE EMBL:AAEX03002026 Ensembl:ENSCAFT00000043995
Uniprot:J9P6Y8
Length = 1782
Score = 339 (124.4 bits), Expect = 3.5e-29, P = 3.5e-29
Identities = 67/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +L+ G+RVLIF+QM RMLD+L +L + + RLDG+ K + R+ +
Sbjct: 770 GKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQAL 829
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + + FCF+LSTR+GG+GINL ADTVV +DSDWNP D QAQ R HRIGQ + V
Sbjct: 830 DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 889
Query: 157 HIYR 160
+IYR
Sbjct: 890 NIYR 893
>UNIPROTKB|E1BYA8 [details] [associations]
symbol:ERCC6 "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0000303 "response to superoxide" evidence=IEA]
[GO:0003682 "chromatin binding" evidence=IEA] [GO:0005730
"nucleolus" evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0006284
"base-excision repair" evidence=IEA] [GO:0006290 "pyrimidine dimer
repair" evidence=IEA] [GO:0007256 "activation of JNKK activity"
evidence=IEA] [GO:0007257 "activation of JUN kinase activity"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0008023 "transcription elongation factor complex"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling pathway in
response to DNA damage" evidence=IEA] [GO:0009636 "response to
toxic substance" evidence=IEA] [GO:0010165 "response to X-ray"
evidence=IEA] [GO:0010224 "response to UV-B" evidence=IEA]
[GO:0010332 "response to gamma radiation" evidence=IEA] [GO:0032403
"protein complex binding" evidence=IEA] [GO:0032786 "positive
regulation of DNA-dependent transcription, elongation"
evidence=IEA] [GO:0045494 "photoreceptor cell maintenance"
evidence=IEA] [GO:0047485 "protein N-terminus binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0008630 GO:GO:0005730 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 GO:GO:0010332 GO:GO:0004386
GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 GO:GO:0032786 GO:GO:0006290 GO:GO:0007256
GeneTree:ENSGT00590000083118 OMA:NGEMQIF GO:GO:0000303
EMBL:AADN02027759 EMBL:AADN02027760 IPI:IPI00592927
Ensembl:ENSGALT00000010107 Uniprot:E1BYA8
Length = 1498
Score = 338 (124.0 bits), Expect = 3.5e-29, P = 3.5e-29
Identities = 63/123 (51%), Positives = 85/123 (69%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK+ ++ +L+ GHRVL FTQ +ML +LE FL + YLR+DGTT + RQ L+
Sbjct: 835 GKMIVVESLLKIWHKQGHRVLFFTQSRQMLQILEVFLRDRNYSYLRMDGTTTIASRQPLI 894
Query: 98 ERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVH 157
R+N D IF F+L+TR GG+G+NLTGAD V+ YD DWNP+ D QA++R RIGQ + V
Sbjct: 895 TRYNEDKSIFIFLLTTRVGGIGVNLTGADRVIIYDPDWNPSTDTQARERAWRIGQKKQVT 954
Query: 158 IYR 160
+YR
Sbjct: 955 VYR 957
>UNIPROTKB|F1NP27 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 EMBL:AADN02065411 EMBL:AADN02065412
EMBL:AADN02065413 IPI:IPI00591777 Ensembl:ENSGALT00000024661
ArrayExpress:F1NP27 Uniprot:F1NP27
Length = 1803
Score = 339 (124.4 bits), Expect = 3.5e-29, P = 3.5e-29
Identities = 67/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +L+ G+RVLIF+QM RMLD+L +L + + RLDG+ K + R+ +
Sbjct: 780 GKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQAL 839
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + + FCF+LSTR+GG+GINL ADTVV +DSDWNP D QAQ R HRIGQ + V
Sbjct: 840 DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 899
Query: 157 HIYR 160
+IYR
Sbjct: 900 NIYR 903
>UNIPROTKB|F1N8K8 [details] [associations]
symbol:CHD1 "Chromodomain-helicase-DNA-binding protein 1"
species:9031 "Gallus gallus" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0003677 GO:GO:0004386
InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:AADN02065411
EMBL:AADN02065412 EMBL:AADN02065413 IPI:IPI00588290
Ensembl:ENSGALT00000023601 ArrayExpress:F1N8K8 Uniprot:F1N8K8
Length = 1804
Score = 339 (124.4 bits), Expect = 3.5e-29, P = 3.5e-29
Identities = 67/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +L+ G+RVLIF+QM RMLD+L +L + + RLDG+ K + R+ +
Sbjct: 780 GKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQAL 839
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + + FCF+LSTR+GG+GINL ADTVV +DSDWNP D QAQ R HRIGQ + V
Sbjct: 840 DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 899
Query: 157 HIYR 160
+IYR
Sbjct: 900 NIYR 903
>UNIPROTKB|F1MGF2 [details] [associations]
symbol:CHD1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 GO:GO:0003677
GO:GO:0006338 GO:GO:0004386 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR023780
InterPro:IPR023779 PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907
GeneTree:ENSGT00560000076896 OMA:AETHENE EMBL:DAAA02021391
EMBL:DAAA02021392 IPI:IPI00717393 UniGene:Bt.105262
Ensembl:ENSBTAT00000034967 NextBio:20866990 Uniprot:F1MGF2
Length = 1810
Score = 339 (124.4 bits), Expect = 3.6e-29, P = 3.6e-29
Identities = 67/124 (54%), Positives = 89/124 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +L+ G+RVLIF+QM RMLD+L +L + + RLDG+ K + R+ +
Sbjct: 800 GKLILLDKLLIRLRERGNRVLIFSQMVRMLDILAEYLKYRQFPFQRLDGSIKGELRKQAL 859
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN + + FCF+LSTR+GG+GINL ADTVV +DSDWNP D QAQ R HRIGQ + V
Sbjct: 860 DHFNAEGSEDFCFLLSTRAGGLGINLASADTVVIFDSDWNPQNDLQAQARAHRIGQKKQV 919
Query: 157 HIYR 160
+IYR
Sbjct: 920 NIYR 923
>UNIPROTKB|Q86WJ1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9606 "Homo sapiens" [GO:0003677 "DNA binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0000166
"nucleotide binding" evidence=IDA] [GO:0016887 "ATPase activity"
evidence=IMP] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=TAS] [GO:0006338 "chromatin remodeling" evidence=IDA]
[GO:0006281 "DNA repair" evidence=TAS] [GO:0006974 "response to DNA
damage stimulus" evidence=IDA] [GO:0005515 "protein binding"
evidence=IPI] [GO:0005634 "nucleus" evidence=IDA] [GO:0006200 "ATP
catabolic process" evidence=IMP] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA] [GO:0005886
"plasma membrane" evidence=IDA] InterPro:IPR000330
InterPro:IPR001650 InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 EMBL:AL356378 GO:GO:0006338
GO:GO:0004003 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
CTD:9557 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV EMBL:AF537213
EMBL:AK001342 EMBL:AK027631 EMBL:EF560738 EMBL:BC001171
EMBL:BC005038 EMBL:BC008649 EMBL:BC043501 EMBL:BC077717
EMBL:AK223496 IPI:IPI00329088 IPI:IPI00854584 IPI:IPI00890729
IPI:IPI00890749 RefSeq:NP_001243265.1 RefSeq:NP_001243266.1
RefSeq:NP_001243267.1 RefSeq:NP_004275.4 RefSeq:NP_078844.2
RefSeq:XP_003960255.1 RefSeq:XP_003960264.1 UniGene:Hs.191164
ProteinModelPortal:Q86WJ1 SMR:Q86WJ1 DIP:DIP-48933N IntAct:Q86WJ1
STRING:Q86WJ1 PhosphoSite:Q86WJ1 DMDM:311033359 PaxDb:Q86WJ1
PRIDE:Q86WJ1 Ensembl:ENST00000369258 Ensembl:ENST00000369259
Ensembl:ENST00000431239 Ensembl:ENST00000579763
Ensembl:ENST00000583055 GeneID:101060601 GeneID:9557
KEGG:hsa:101060601 KEGG:hsa:9557 UCSC:uc001epm.4 UCSC:uc001epo.4
UCSC:uc009wjh.3 GeneCards:GC01P146717 H-InvDB:HIX0000988
H-InvDB:HIX0028745 HGNC:HGNC:1916 HPA:HPA027789 HPA:HPA028670
MIM:613039 neXtProt:NX_Q86WJ1 PharmGKB:PA26452 InParanoid:Q86WJ1
OMA:TCQTIAL PhylomeDB:Q86WJ1 ChiTaRS:CHD1L GenomeRNAi:9557
NextBio:35849 ArrayExpress:Q86WJ1 Bgee:Q86WJ1 CleanEx:HS_CHD1L
Genevestigator:Q86WJ1 Uniprot:Q86WJ1
Length = 897
Score = 334 (122.6 bits), Expect = 4.0e-29, P = 4.0e-29
Identities = 63/123 (51%), Positives = 90/123 (73%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L L +GGHRVL+F+QMT+MLD+L+ ++++ G+ Y R+DG+ + ++R + +
Sbjct: 347 GKLHLLDKLLAFLYSGGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 406
Query: 98 ERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVH 157
+ F IF F+LSTR+GGVG+NLT ADTV+F DSD+NP D QA R HRIGQ + V
Sbjct: 407 KNFGQQP-IFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVK 465
Query: 158 IYR 160
+ R
Sbjct: 466 VIR 468
>ZFIN|ZDB-GENE-040426-892 [details] [associations]
symbol:chd1l "chromodomain helicase DNA binding
protein 1-like" species:7955 "Danio rerio" [GO:0003677 "DNA
binding" evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0003676 "nucleic
acid binding" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=ISS] [GO:0006974 "response to DNA damage stimulus"
evidence=IEA;ISS] [GO:0005634 "nucleus" evidence=IEA;ISS]
[GO:0000166 "nucleotide binding" evidence=IEA;ISS] [GO:0016887
"ATPase activity" evidence=ISS] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0016787 "hydrolase activity" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS00690 PROSITE:PS51194 SMART:SM00490 InterPro:IPR001357
ZFIN:ZDB-GENE-040426-892 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 GO:GO:0004386 SUPFAM:SSF52113 PROSITE:PS50172
HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154 CTD:9557
HOGENOM:HOG000030789 HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV
EMBL:BC050498 IPI:IPI00482841 RefSeq:NP_956607.1 UniGene:Dr.84280
ProteinModelPortal:Q7ZU90 PRIDE:Q7ZU90 GeneID:393283
KEGG:dre:393283 InParanoid:Q7ZU90 NextBio:20814340
ArrayExpress:Q7ZU90 Uniprot:Q7ZU90
Length = 1026
Score = 335 (123.0 bits), Expect = 4.0e-29, P = 4.0e-29
Identities = 64/123 (52%), Positives = 89/123 (72%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L L+ GGH VL+F+QMTRMLD+L+ +L + G+ Y RLDG+ + ++R + +
Sbjct: 336 GKLSLLDSMLAYLQEGGHHVLLFSQMTRMLDILQDYLEYRGYSYERLDGSVRGEERNLAI 395
Query: 98 ERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVH 157
+ F+ +F F+LST++GGVG+NLT ADTV+F D D+NP D QA R HRIGQTR V
Sbjct: 396 KNFSTKD-VFIFLLSTKAGGVGMNLTAADTVIFVDGDFNPQNDLQAAARAHRIGQTRPVK 454
Query: 158 IYR 160
+ R
Sbjct: 455 VIR 457
>UNIPROTKB|F1PTH3 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 Ensembl:ENSCAFT00000014716
Uniprot:F1PTH3
Length = 2715
Score = 340 (124.7 bits), Expect = 4.7e-29, P = 4.7e-29
Identities = 67/124 (54%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KL AGGH+VLIF+QM R LD+LE +L + Y R+DG + + RQ +
Sbjct: 783 GKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAI 842
Query: 98 ERF-NMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 843 DRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 902
Query: 157 HIYR 160
+YR
Sbjct: 903 KVYR 906
>UNIPROTKB|J9P0F6 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 CTD:84181 KO:K14436 GeneTree:ENSGT00560000077077
EMBL:AAEX03013942 EMBL:AAEX03013943 RefSeq:XP_534421.3
Ensembl:ENSCAFT00000048852 GeneID:477230 KEGG:cfa:477230
Uniprot:J9P0F6
Length = 2715
Score = 340 (124.7 bits), Expect = 4.7e-29, P = 4.7e-29
Identities = 67/124 (54%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KL AGGH+VLIF+QM R LD+LE +L + Y R+DG + + RQ +
Sbjct: 783 GKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAI 842
Query: 98 ERF-NMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 843 DRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 902
Query: 157 HIYR 160
+YR
Sbjct: 903 KVYR 906
>UNIPROTKB|Q8TD26 [details] [associations]
symbol:CHD6 "Chromodomain-helicase-DNA-binding protein 6"
species:9606 "Homo sapiens" [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0005634 "nucleus" evidence=NAS]
[GO:0006355 "regulation of transcription, DNA-dependent"
evidence=NAS] [GO:0006338 "chromatin remodeling" evidence=NAS]
[GO:0007399 "nervous system development" evidence=NAS] [GO:0003682
"chromatin binding" evidence=NAS] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR002464 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS51194
SMART:SM00298 SMART:SM00490 SMART:SM00717 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0007399 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 GO:GO:0003682 GO:GO:0006338
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 PROSITE:PS00598 CleanEx:HS_CHD5 EMBL:AY034072
EMBL:AL121674 EMBL:AL031669 EMBL:AL031667 EMBL:BC021907
EMBL:BC039860 EMBL:BC040016 EMBL:AF525085 EMBL:AB037756
EMBL:AK026022 IPI:IPI00220289 IPI:IPI00395823 IPI:IPI00513717
RefSeq:NP_115597.3 UniGene:Hs.740645 UniGene:Hs.741381 PDB:2EPB
PDBsum:2EPB ProteinModelPortal:Q8TD26 SMR:Q8TD26 IntAct:Q8TD26
MINT:MINT-1197235 STRING:Q8TD26 PhosphoSite:Q8TD26 DMDM:296439466
PaxDb:Q8TD26 PRIDE:Q8TD26 Ensembl:ENST00000373222
Ensembl:ENST00000373233 Ensembl:ENST00000440647 GeneID:84181
KEGG:hsa:84181 UCSC:uc002xka.1 UCSC:uc002xkc.3 CTD:84181
GeneCards:GC20M040030 H-InvDB:HIX0015824 H-InvDB:HIX0027712
HGNC:HGNC:19057 neXtProt:NX_Q8TD26 PharmGKB:PA134974700
HOVERGEN:HBG081150 InParanoid:Q8TD26 KO:K14436 OMA:CKWATME
OrthoDB:EOG4NP72J PhylomeDB:Q8TD26 ChiTaRS:CHD6
EvolutionaryTrace:Q8TD26 GenomeRNAi:84181 NextBio:73559
ArrayExpress:Q8TD26 Bgee:Q8TD26 CleanEx:HS_CHD6
Genevestigator:Q8TD26 GermOnline:ENSG00000124177 Uniprot:Q8TD26
Length = 2715
Score = 340 (124.7 bits), Expect = 4.7e-29, P = 4.7e-29
Identities = 67/124 (54%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KL AGGH+VLIF+QM R LD+LE +L + Y R+DG + + RQ +
Sbjct: 783 GKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAI 842
Query: 98 ERF-NMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 843 DRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 902
Query: 157 HIYR 160
+YR
Sbjct: 903 KVYR 906
>UNIPROTKB|F1N734 [details] [associations]
symbol:CHD6 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR000953 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR002464 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 InterPro:IPR016197 SUPFAM:SSF54160
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 OMA:CKWATME GeneTree:ENSGT00560000077077
EMBL:DAAA02036652 EMBL:DAAA02036653 EMBL:DAAA02036654
EMBL:DAAA02036655 IPI:IPI00924240 Ensembl:ENSBTAT00000061177
ArrayExpress:F1N734 Uniprot:F1N734
Length = 2720
Score = 340 (124.7 bits), Expect = 4.7e-29, P = 4.7e-29
Identities = 67/124 (54%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL +D +L KL AGGH+VLIF+QM R LD+LE +L + Y R+DG + + RQ +
Sbjct: 782 GKLVLIDKLLPKLIAGGHKVLIFSQMVRCLDILEDYLIQRRYTYERIDGRVRGNLRQAAI 841
Query: 98 ERF-NMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RF D+ F F+L TR+GG+GINLT ADT + +DSDWNP D QAQ RCHRIGQ++ V
Sbjct: 842 DRFCKPDSDRFVFLLCTRAGGLGINLTAADTCIIFDSDWNPQNDLQAQARCHRIGQSKAV 901
Query: 157 HIYR 160
+YR
Sbjct: 902 KVYR 905
>UNIPROTKB|Q3B7N1 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006200 "ATP catabolic
process" evidence=ISS] [GO:0005634 "nucleus" evidence=ISS]
[GO:0006974 "response to DNA damage stimulus" evidence=ISS]
[GO:0016887 "ATPase activity" evidence=ISS] [GO:0006338 "chromatin
remodeling" evidence=ISS] [GO:0000166 "nucleotide binding"
evidence=ISS] [GO:0006281 "DNA repair" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005524 GO:GO:0005634 GO:GO:0000166
GO:GO:0003677 GO:GO:0006281 GO:GO:0006974 GO:GO:0016887
GO:GO:0006338 HSSP:Q97XQ5 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589 PROSITE:PS51154
GO:GO:0008026 EMBL:BC107534 IPI:IPI00710168 RefSeq:NP_001032909.1
UniGene:Bt.18335 ProteinModelPortal:Q3B7N1 PRIDE:Q3B7N1
GeneID:524787 KEGG:bta:524787 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 InParanoid:Q3B7N1 OrthoDB:EOG4SXNBV
NextBio:20874039 Uniprot:Q3B7N1
Length = 897
Score = 332 (121.9 bits), Expect = 6.5e-29, P = 6.5e-29
Identities = 63/123 (51%), Positives = 90/123 (73%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L L + GHRVL+F+QMT+MLD+L+ +L++ G+ Y R+DG+ + ++R + +
Sbjct: 349 GKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAI 408
Query: 98 ERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVH 157
+ F IF F+LSTR+GGVG+NLT ADTV+F+DSD+NP D QA R HRIGQ + V
Sbjct: 409 KNFGQQP-IFTFLLSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVK 467
Query: 158 IYR 160
+ R
Sbjct: 468 VIR 470
>ZFIN|ZDB-GENE-070228-1 [details] [associations]
symbol:ercc6 "excision repair cross-complementing
rodent repair deficiency, complementation group 6" species:7955
"Danio rerio" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003676 "nucleic acid binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 ZFIN:ZDB-GENE-070228-1 GO:GO:0005524
GO:GO:0003677 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GeneTree:ENSGT00590000083118 CTD:2074 KO:K10841
EMBL:CR762493 IPI:IPI00933448 RefSeq:XP_688972.2
Ensembl:ENSDART00000112380 GeneID:560477 KEGG:dre:560477
NextBio:20883461 Bgee:F1RDN1 Uniprot:F1RDN1
Length = 1390
Score = 334 (122.6 bits), Expect = 8.4e-29, P = 8.4e-29
Identities = 63/123 (51%), Positives = 88/123 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK+ ++ +LR GHRVL+FTQ +ML++LE F+ +G YL++DGTT + RQ L+
Sbjct: 817 GKMIVVESLLRLWHKQGHRVLLFTQSRQMLEILEVFVKENGFSYLKMDGTTTIASRQPLI 876
Query: 98 ERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVH 157
+FN + IF FIL+TR GG+G+NLTGA+ VV YD DWNP+ D QA++R RIGQ + V
Sbjct: 877 AQFNQNKDIFVFILTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKQQVT 936
Query: 158 IYR 160
+YR
Sbjct: 937 VYR 939
>MGI|MGI:1915308 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein
1-like" species:10090 "Mus musculus" [GO:0000166 "nucleotide
binding" evidence=ISO] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0006200 "ATP
catabolic process" evidence=ISO] [GO:0006281 "DNA repair"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=ISO]
[GO:0006974 "response to DNA damage stimulus" evidence=ISO]
[GO:0016787 "hydrolase activity" evidence=IEA] [GO:0016887 "ATPase
activity" evidence=ISO] InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
MGI:MGI:1915308 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0000166 GO:GO:0003677 GO:GO:0006281
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386 HSSP:Q97XQ5
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 CTD:9557 HOGENOM:HOG000030789
HOVERGEN:HBG077542 OrthoDB:EOG4SXNBV OMA:TCQTIAL ChiTaRS:CHD1L
EMBL:AK014473 EMBL:AK165656 EMBL:BC052385 EMBL:BC057567
EMBL:BC062966 IPI:IPI00466859 IPI:IPI00890897 RefSeq:NP_080815.1
UniGene:Mm.41447 ProteinModelPortal:Q9CXF7 SMR:Q9CXF7
DIP:DIP-58953N STRING:Q9CXF7 PhosphoSite:Q9CXF7 PaxDb:Q9CXF7
PRIDE:Q9CXF7 Ensembl:ENSMUST00000029730 GeneID:68058 KEGG:mmu:68058
UCSC:uc008qow.1 UCSC:uc008qox.1 GeneTree:ENSGT00670000098110
InParanoid:Q9CXF7 NextBio:326336 Bgee:Q9CXF7 Genevestigator:Q9CXF7
Uniprot:Q9CXF7
Length = 900
Score = 331 (121.6 bits), Expect = 8.4e-29, P = 8.4e-29
Identities = 63/123 (51%), Positives = 90/123 (73%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L L +GGHRVL+F+QMT MLD+L+ ++++ G+ Y R+DG+ + ++R + +
Sbjct: 341 GKLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 400
Query: 98 ERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVH 157
+ F + IF F+LSTR+GGVG+NLT ADTV+F DSD+NP D QA R HRIGQ + V
Sbjct: 401 KNFG-NQPIFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVK 459
Query: 158 IYR 160
+ R
Sbjct: 460 VIR 462
>RGD|1311935 [details] [associations]
symbol:Chd1l "chromodomain helicase DNA binding protein 1-like"
species:10116 "Rattus norvegicus" [GO:0000166 "nucleotide binding"
evidence=ISO] [GO:0003677 "DNA binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=ISO] [GO:0005737
"cytoplasm" evidence=ISO] [GO:0005886 "plasma membrane"
evidence=ISO] [GO:0006200 "ATP catabolic process" evidence=ISO]
[GO:0006338 "chromatin remodeling" evidence=ISO] [GO:0006974
"response to DNA damage stimulus" evidence=ISO] [GO:0016887 "ATPase
activity" evidence=ISO] [GO:0005730 "nucleolus" evidence=ISO]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 RGD:1311935 GO:GO:0005886
GO:GO:0005524 GO:GO:0005634 GO:GO:0005737 GO:GO:0003677
GO:GO:0006974 GO:GO:0016887 GO:GO:0006338 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 OrthoDB:EOG4SXNBV GeneTree:ENSGT00670000098110
IPI:IPI00560655 Ensembl:ENSRNOT00000043937 UCSC:RGD:1311935
ArrayExpress:D4ACG6 Uniprot:D4ACG6
Length = 903
Score = 331 (121.6 bits), Expect = 8.4e-29, P = 8.4e-29
Identities = 63/123 (51%), Positives = 89/123 (72%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L L +GGHRVL+F+QMT MLD+L+ ++++ G+ Y R+DG+ + ++R + +
Sbjct: 341 GKLHLLDRLLAFLYSGGHRVLLFSQMTHMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 400
Query: 98 ERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVH 157
+ F IF F+LSTR+GGVG+NLT ADTV+F DSD+NP D QA R HRIGQ + V
Sbjct: 401 KNFGKQP-IFVFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVK 459
Query: 158 IYR 160
+ R
Sbjct: 460 VIR 462
>ZFIN|ZDB-GENE-070705-296 [details] [associations]
symbol:si:dkey-148b12.1 "si:dkey-148b12.1"
species:7955 "Danio rerio" [GO:0016817 "hydrolase activity, acting
on acid anhydrides" evidence=IEA] [GO:0043044 "ATP-dependent
chromatin remodeling" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0016818 "hydrolase
activity, acting on acid anhydrides, in phosphorus-containing
anhydrides" evidence=IEA] [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0031491
"nucleosome binding" evidence=IEA] [GO:0003682 "chromatin binding"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
InterPro:IPR009057 InterPro:IPR015194 InterPro:IPR015195
InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271 Pfam:PF09110
Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194 SMART:SM00490
SMART:SM00717 ZFIN:ZDB-GENE-070705-296 GO:GO:0005524 GO:GO:0003677
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862
SUPFAM:SSF101224 HOVERGEN:HBG056329 KO:K11727 OrthoDB:EOG44J2H9
EMBL:CR848717 EMBL:CU104724 IPI:IPI00488326 RefSeq:NP_001093467.1
UniGene:Dr.81160 SMR:A5WUY4 Ensembl:ENSDART00000020725
GeneID:559803 KEGG:dre:559803 OMA:IGHAWIN NextBio:20883144
Uniprot:A5WUY4
Length = 1036
Score = 331 (121.6 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 66/133 (49%), Positives = 92/133 (69%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D L+ + GK+ +LD +L K++ G RVLIF+QMTR+LD+LE + + G Y RLDG T
Sbjct: 437 DTHLV-INSGKMVALDKLLPKVQEQGSRVLIFSQMTRVLDILEDYCMWRGFEYCRLDGNT 495
Query: 89 KVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRC 147
+ R+ ++ FN ++ F F+LSTR+GG+GINL AD V+ YDSDWNP +D QA DR
Sbjct: 496 PHEAREQAIDAFNAPNSSKFIFMLSTRAGGLGINLATADVVILYDSDWNPQVDLQAMDRA 555
Query: 148 HRIGQTRDVHIYR 160
HRIGQ + V ++R
Sbjct: 556 HRIGQRKPVKVFR 568
>ZFIN|ZDB-GENE-081104-186 [details] [associations]
symbol:si:ch211-227i14.2 "si:ch211-227i14.2"
species:7955 "Danio rerio" [GO:0003676 "nucleic acid binding"
evidence=IEA] [GO:0004386 "helicase activity" evidence=IEA]
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001005 InterPro:IPR001650
Pfam:PF00176 PROSITE:PS51194 SMART:SM00717 ZFIN:ZDB-GENE-081104-186
GO:GO:0005524 GO:GO:0003677 GO:GO:0003682 GO:GO:0004386
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR017877
PROSITE:PS50090 InterPro:IPR014012 InterPro:IPR006562 Pfam:PF07529
PROSITE:PS51204 GeneTree:ENSGT00530000063427 EMBL:AL929056
EMBL:CABZ01053382 EMBL:CABZ01053383 IPI:IPI00890401
Ensembl:ENSDART00000111655 Bgee:F1Q5V1 Uniprot:F1Q5V1
Length = 3108
Score = 337 (123.7 bits), Expect = 1.1e-28, P = 1.1e-28
Identities = 72/160 (45%), Positives = 109/160 (68%)
Query: 3 AAMTAELRPKLRLLHPVTSAMCTQFPDPRLIQYD-CGKLQSLDVILRKLKAGGHRVLIFT 61
A AE+R KL PV S FPD +++ D GKL++L ++L+KL A RVLIFT
Sbjct: 1840 APFNAEIR-KLAC-PPVAS-----FPDAHMLEMDSAGKLEALSILLQKLSAENRRVLIFT 1892
Query: 62 QMTRMLDVLEAFLNFHGHI-YLRLDGTTKVDQRQVLMERFNMDARIFCFILSTRSGGVGI 120
QM MLD+LE+FL+ H H+ Y+RLD + +++RQ ++++N + +IFC IL+ R
Sbjct: 1893 QMASMLDILESFLD-HRHLTYVRLDESLSLEERQEQVKKYNRNRQIFCTILTNRCCSAMG 1951
Query: 121 NLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVHIYR 160
++ ADT+VFYD+D NP+MD + Q+ C +IG+++D+HIYR
Sbjct: 1952 HVFDADTIVFYDTDLNPSMDMRTQEWCDKIGRSKDIHIYR 1991
>UNIPROTKB|F1N166 [details] [associations]
symbol:SMARCA1 "Uncharacterized protein" species:9913 "Bos
taurus" [GO:0045893 "positive regulation of transcription,
DNA-dependent" evidence=IEA] [GO:0036310 "annealing helicase
activity" evidence=IEA] [GO:0030182 "neuron differentiation"
evidence=IEA] [GO:0016589 "NURF complex" evidence=IEA] [GO:0008094
"DNA-dependent ATPase activity" evidence=IEA] [GO:0007420 "brain
development" evidence=IEA] [GO:0006351 "transcription,
DNA-dependent" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:0031491 "nucleosome binding"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR020838 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 Pfam:PF13892 PROSITE:PS51194
SMART:SM00490 SMART:SM00717 GO:GO:0005524 GO:GO:0045893
GO:GO:0007420 GO:GO:0030182 GO:GO:0003677 GO:GO:0006351
Gene3D:1.10.10.60 SUPFAM:SSF46689 InterPro:IPR017884
PROSITE:PS51293 GO:GO:0004386 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0043044 GO:GO:0016589
GO:GO:0008094 GeneTree:ENSGT00680000100002 SUPFAM:SSF101224
OMA:PMSQKRK EMBL:DAAA02067438 EMBL:DAAA02067437 IPI:IPI01018574
Ensembl:ENSBTAT00000002973 Uniprot:F1N166
Length = 1078
Score = 203 (76.5 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 37/65 (56%), Positives = 49/65 (75%)
Query: 97 MERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRD 155
+E FN+ ++ F F+LSTR+GG+GINL AD V+ YDSDWNP +D QA DR HRIGQ +
Sbjct: 565 IEAFNIPNSSKFIFMLSTRAGGLGINLASADVVILYDSDWNPQVDLQAMDRAHRIGQKKP 624
Query: 156 VHIYR 160
V ++R
Sbjct: 625 VRVFR 629
Score = 157 (60.3 bits), Expect = 1.2e-28, Sum P(2) = 1.2e-28
Identities = 32/74 (43%), Positives = 50/74 (67%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D ++ + GK+ LD +L KLK G RVLIF+QMTR+LD+LE + + G+ Y RLDG T
Sbjct: 481 DEHIVS-NSGKMVVLDKLLAKLKEQGSRVLIFSQMTRLLDILEDYCMWRGYEYCRLDGQT 539
Query: 89 KVDQRQVLMERFNM 102
++R+ +++ F +
Sbjct: 540 PHEEREEILKDFKI 553
Score = 39 (18.8 bits), Expect = 2.6e-16, Sum P(2) = 2.6e-16
Identities = 12/34 (35%), Positives = 16/34 (47%)
Query: 43 LDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNF 76
L I+R K+ +L T + L L A LNF
Sbjct: 326 LSEIVRDFKSTNRLLLTGTPLQNNLHELWALLNF 359
>UNIPROTKB|F1MJ46 [details] [associations]
symbol:SMARCA4 "Transcription activator BRG1" species:9913
"Bos taurus" [GO:0071565 "nBAF complex" evidence=IEA] [GO:0071564
"npBAF complex" evidence=IEA] [GO:0060347 "heart trabecula
formation" evidence=IEA] [GO:0060318 "definitive erythrocyte
differentiation" evidence=IEA] [GO:0048730 "epidermis
morphogenesis" evidence=IEA] [GO:0048562 "embryonic organ
morphogenesis" evidence=IEA] [GO:0045944 "positive regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0043966 "histone H3 acetylation" evidence=IEA] [GO:0043388
"positive regulation of DNA binding" evidence=IEA] [GO:0035887
"aortic smooth muscle cell differentiation" evidence=IEA]
[GO:0035116 "embryonic hindlimb morphogenesis" evidence=IEA]
[GO:0030902 "hindbrain development" evidence=IEA] [GO:0030900
"forebrain development" evidence=IEA] [GO:0030216 "keratinocyte
differentiation" evidence=IEA] [GO:0030198 "extracellular matrix
organization" evidence=IEA] [GO:0019827 "stem cell maintenance"
evidence=IEA] [GO:0010424 "DNA methylation on cytosine within a CG
sequence" evidence=IEA] [GO:0008134 "transcription factor binding"
evidence=IEA] [GO:0007403 "glial cell fate determination"
evidence=IEA] [GO:0006346 "methylation-dependent chromatin
silencing" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005726 "perichromatin fibrils" evidence=IEA]
[GO:0005719 "nuclear euchromatin" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0001889 "liver development"
evidence=IEA] [GO:0001835 "blastocyst hatching" evidence=IEA]
[GO:0001832 "blastocyst growth" evidence=IEA] [GO:0001570
"vasculogenesis" evidence=IEA] [GO:0000977 "RNA polymerase II
regulatory region sequence-specific DNA binding" evidence=IEA]
[GO:0000902 "cell morphogenesis" evidence=IEA] [GO:0000792
"heterochromatin" evidence=IEA] [GO:0000122 "negative regulation of
transcription from RNA polymerase II promoter" evidence=IEA]
[GO:0005524 "ATP binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR006576 InterPro:IPR014978
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF07533 Pfam:PF08880
PRINTS:PR00503 PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297
SMART:SM00490 SMART:SM00592 SMART:SM00951 GO:GO:0005524
GO:GO:0030216 GO:GO:0045944 GO:GO:0030198 GO:GO:0030900
GO:GO:0001889 GO:GO:0003682 GO:GO:0006338 GO:GO:0000122
GO:GO:0071564 GO:GO:0071565 GO:GO:0000902 GO:GO:0004386
GO:GO:0001570 GO:GO:0035116 GO:GO:0005719 GO:GO:0030902
GO:GO:0048730 GO:GO:0000977 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0019827 Gene3D:1.20.920.10 SUPFAM:SSF47370
PROSITE:PS00633 InterPro:IPR018359 GO:GO:0000792 GO:GO:0060347
GO:GO:0043966 GO:GO:0043388 GeneTree:ENSGT00550000074659
InterPro:IPR013999 InterPro:IPR014012 InterPro:IPR006562
Pfam:PF07529 SMART:SM00573 PROSITE:PS51204 GO:GO:0001835
GO:GO:0007403 GO:GO:0006346 GO:GO:0010424 GO:GO:0060318
GO:GO:0048562 GO:GO:0001832 GO:GO:0005726 GO:GO:0035887
IPI:IPI00693529 OMA:HKPMESM EMBL:DAAA02019479 EMBL:DAAA02019480
EMBL:DAAA02019481 Ensembl:ENSBTAT00000025598 ArrayExpress:F1MJ46
Uniprot:F1MJ46
Length = 1604
Score = 332 (121.9 bits), Expect = 1.7e-28, P = 1.7e-28
Identities = 63/123 (51%), Positives = 85/123 (69%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL+A H+VL+F QMT ++ ++E + + G YLRLDGTTK + R +L+
Sbjct: 1072 GKFELLDRILPKLRATNHKVLLFCQMTSLMTIMEDYFAYRGFKYLRLDGTTKAEDRGMLL 1131
Query: 98 ERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVH 157
FN + +LSTR+GG+G+NL ADTV+ +DSDWNP D QAQDR HRIGQ +V
Sbjct: 1132 T-FNEPGSEYFILLSTRAGGLGLNLQSADTVIIFDSDWNPHQDLQAQDRAHRIGQQNEVR 1190
Query: 158 IYR 160
+ R
Sbjct: 1191 VLR 1193
>UNIPROTKB|F5H493 [details] [associations]
symbol:ERCC6 "DNA excision repair protein ERCC-6"
species:9606 "Homo sapiens" [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004386 "helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0000303 "response to superoxide"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0006290 "pyrimidine
dimer repair" evidence=IEA] [GO:0007256 "activation of JNKK
activity" evidence=IEA] [GO:0007257 "activation of JUN kinase
activity" evidence=IEA] [GO:0008630 "intrinsic apoptotic signaling
pathway in response to DNA damage" evidence=IEA] [GO:0009636
"response to toxic substance" evidence=IEA] [GO:0010165 "response
to X-ray" evidence=IEA] [GO:0010224 "response to UV-B"
evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0045494 "photoreceptor cell maintenance"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0008630 GO:GO:0003677 GO:GO:0009636 GO:GO:0045494
GO:GO:0010332 GO:GO:0004386 GO:GO:0010165 InterPro:IPR014001
PROSITE:PS51192 GO:GO:0010224 GO:GO:0007257 GO:GO:0006283
EMBL:AC073366 GO:GO:0006290 GO:GO:0007256 EMBL:AL138760
HGNC:HGNC:3438 ChiTaRS:ERCC6 GO:GO:0000303 IPI:IPI01012579
ProteinModelPortal:F5H493 SMR:F5H493 Ensembl:ENST00000542458
UCSC:uc009xod.3 ArrayExpress:F5H493 Bgee:F5H493 Uniprot:F5H493
Length = 863
Score = 326 (119.8 bits), Expect = 2.7e-28, P = 2.7e-28
Identities = 61/123 (49%), Positives = 86/123 (69%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK+ ++ +L+ G RVL+F+Q +MLD+LE FL + YL++DGTT + RQ L+
Sbjct: 209 GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLI 268
Query: 98 ERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVH 157
R+N D IF F+L+TR GG+G+NLTGA+ VV YD DWNP+ D QA++R RIGQ + V
Sbjct: 269 TRYNEDTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVT 328
Query: 158 IYR 160
+YR
Sbjct: 329 VYR 331
>FB|FBgn0086902 [details] [associations]
symbol:kis "kismet" species:7227 "Drosophila melanogaster"
[GO:0008026 "ATP-dependent helicase activity" evidence=ISS]
[GO:0005634 "nucleus" evidence=ISS;IDA] [GO:0007379 "segment
specification" evidence=IMP] [GO:0007350 "blastoderm segmentation"
evidence=IMP] [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524
"ATP binding" evidence=IEA] [GO:0019730 "antimicrobial humoral
response" evidence=IMP] [GO:0007298 "border follicle cell
migration" evidence=IMP] [GO:0005875 "microtubule associated
complex" evidence=IDA] [GO:0007411 "axon guidance" evidence=IMP]
[GO:0016322 "neuron remodeling" evidence=IMP] [GO:0040011
"locomotion" evidence=IMP] [GO:0007614 "short-term memory"
evidence=IMP] [GO:0046622 "positive regulation of organ growth"
evidence=IMP] [GO:0045892 "negative regulation of transcription,
DNA-dependent" evidence=IMP] [GO:0007476 "imaginal disc-derived
wing morphogenesis" evidence=IMP] [GO:0007031 "peroxisome
organization" evidence=IMP] [GO:0008340 "determination of adult
lifespan" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR006576 Pfam:PF00176 Pfam:PF00271
Pfam:PF07533 PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298
SMART:SM00490 SMART:SM00592 Pfam:PF00385 GO:GO:0005524
GO:GO:0005634 GO:GO:0007411 GO:GO:0045892 GO:GO:0005875
EMBL:AE014134 GO:GO:0003677 GO:GO:0006200 GO:GO:0016322
GO:GO:0007031 GO:GO:0016887 GO:GO:0007298 GO:GO:0007614
GO:GO:0004386 GO:GO:0007379 GO:GO:0046622 GO:GO:0007476
GO:GO:0019730 InterPro:IPR016197 SUPFAM:SSF54160 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0007350 InterPro:IPR023780
KO:K14437 GeneTree:ENSGT00560000077077 RefSeq:NP_001137761.1
UniGene:Dm.3182 ProteinModelPortal:B7Z002 SMR:B7Z002 STRING:B7Z002
EnsemblMetazoa:FBtr0299837 GeneID:33185 KEGG:dme:Dmel_CG3696
CTD:33185 FlyBase:FBgn0086902 OMA:TTFEMIV OrthoDB:EOG4BZKHC
PhylomeDB:B7Z002 GenomeRNAi:33185 NextBio:782323 Bgee:B7Z002
Uniprot:B7Z002
Length = 5517
Score = 336 (123.3 bits), Expect = 2.8e-28, P = 2.8e-28
Identities = 66/124 (53%), Positives = 88/124 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK+ +D +L KLKA GHRVLIF+QM R LD+LE +L + + + R+DG + + RQ +
Sbjct: 2350 GKMVLIDKLLPKLKANGHRVLIFSQMVRCLDILEDYLVYRKYPFERIDGRIRGNLRQEAI 2409
Query: 98 ERFNMDARI-FCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+R++ F F+L T++GG+GINLT ADTV+ YDSDWNP D QAQ RCHRIGQ + V
Sbjct: 2410 DRYSKPGSDRFVFLLCTKAGGLGINLTAADTVIIYDSDWNPQNDLQAQARCHRIGQRKMV 2469
Query: 157 HIYR 160
IYR
Sbjct: 2470 KIYR 2473
>UNIPROTKB|F1SDB8 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0006974 "response to DNA damage stimulus" evidence=IEA]
[GO:0006338 "chromatin remodeling" evidence=IEA] [GO:0005886
"plasma membrane" evidence=IEA] [GO:0005737 "cytoplasm"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008026
"ATP-dependent helicase activity" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 InterPro:IPR002589
PROSITE:PS51154 GO:GO:0008026 OMA:TCQTIAL
GeneTree:ENSGT00670000098110 EMBL:CU462855
Ensembl:ENSSSCT00000007340 Uniprot:F1SDB8
Length = 905
Score = 326 (119.8 bits), Expect = 2.9e-28, P = 2.9e-28
Identities = 62/123 (50%), Positives = 89/123 (72%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L L + GHRVL+F+QMT+MLD+L+ ++++ G+ Y R+DG+ + ++R + +
Sbjct: 352 GKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYMDYRGYSYERVDGSVRGEERHLAI 411
Query: 98 ERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVH 157
+ F IF F+LSTR+GGVG+NLT ADTV+F DSD+NP D QA R HRIGQ + V
Sbjct: 412 KNFGQQP-IFIFLLSTRAGGVGMNLTAADTVIFVDSDFNPQNDLQAAARAHRIGQNKSVK 470
Query: 158 IYR 160
+ R
Sbjct: 471 VIR 473
>WB|WBGene00002169 [details] [associations]
symbol:isw-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0003676 "nucleic acid binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0016787 "hydrolase activity"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0031491 "nucleosome binding" evidence=IEA]
[GO:0043044 "ATP-dependent chromatin remodeling" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006338 "chromatin
remodeling" evidence=IEA] [GO:0016818 "hydrolase activity, acting
on acid anhydrides, in phosphorus-containing anhydrides"
evidence=IEA] [GO:0000003 "reproduction" evidence=IMP] [GO:0040010
"positive regulation of growth rate" evidence=IMP] [GO:0009792
"embryo development ending in birth or egg hatching" evidence=IMP]
[GO:0002009 "morphogenesis of an epithelium" evidence=IMP]
[GO:0040035 "hermaphrodite genitalia development" evidence=IMP]
[GO:0040007 "growth" evidence=IMP] [GO:0002119 "nematode larval
development" evidence=IMP] [GO:0040027 "negative regulation of
vulval development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0008340 "determination of adult lifespan"
evidence=IMP] [GO:0000790 "nuclear chromatin" evidence=IDA]
[GO:0040026 "positive regulation of vulval development"
evidence=IGI] InterPro:IPR000330 InterPro:IPR001005
InterPro:IPR001650 InterPro:IPR009057 InterPro:IPR015194
InterPro:IPR015195 InterPro:IPR017956 Pfam:PF00176 Pfam:PF00271
Pfam:PF09110 Pfam:PF09111 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00384 SMART:SM00490 SMART:SM00717 GO:GO:0005524
GO:GO:0008340 GO:GO:0009792 GO:GO:0002009 GO:GO:0040007
GO:GO:0040010 GO:GO:0002119 GO:GO:0016246 GO:GO:0006355
GO:GO:0003677 GO:GO:0006351 Gene3D:1.10.10.60 SUPFAM:SSF46689
GO:GO:0000790 GO:GO:0040035 InterPro:IPR017884 PROSITE:PS51293
GO:GO:0004386 GO:GO:0040027 eggNOG:COG0553 InterPro:IPR014001
SMART:SM00487 PROSITE:PS51192 GO:GO:0016585 GO:GO:0031491
GO:GO:0043044 GO:GO:0040026 EMBL:FO081312 PIR:S44645
RefSeq:NP_498468.2 ProteinModelPortal:P41877 SMR:P41877
STRING:P41877 PaxDb:P41877 EnsemblMetazoa:F37A4.8 GeneID:175944
KEGG:cel:CELE_F37A4.8 UCSC:F37A4.8 CTD:175944 WormBase:F37A4.8
GeneTree:ENSGT00680000100002 HOGENOM:HOG000192862 InParanoid:P41877
KO:K11654 OMA:MQRKWYK NextBio:890418 SUPFAM:SSF101224
Uniprot:P41877
Length = 1009
Score = 326 (119.8 bits), Expect = 3.6e-28, P = 3.6e-28
Identities = 66/133 (49%), Positives = 89/133 (66%)
Query: 29 DPRLIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTT 88
D L+ + GK+ LD +L K K G RVLIF+Q +RMLD+LE F + + Y RLDG+T
Sbjct: 427 DQHLVD-NSGKMVVLDKLLMKFKEQGSRVLIFSQFSRMLDLLEDFCWWRHYEYCRLDGST 485
Query: 89 KVDQRQVLMERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRC 147
+ R +E +N D++ F F+L+TR+GG+GINL AD V+ YDSDWNP D QA DR
Sbjct: 486 PHEDRSNAIEAYNAPDSKKFIFMLTTRAGGLGINLATADVVIIYDSDWNPQSDLQAMDRA 545
Query: 148 HRIGQTRDVHIYR 160
HRIGQ + V ++R
Sbjct: 546 HRIGQKKQVRVFR 558
>FB|FBgn0262519 [details] [associations]
symbol:Mi-2 species:7227 "Drosophila melanogaster"
[GO:0016887 "ATPase activity" evidence=IDA;NAS] [GO:0005634
"nucleus" evidence=ISS;IDA;NAS] [GO:0004003 "ATP-dependent DNA
helicase activity" evidence=ISS] [GO:0004386 "helicase activity"
evidence=ISS] [GO:0016581 "NuRD complex" evidence=ISS;TAS]
[GO:0006333 "chromatin assembly or disassembly" evidence=ISS]
[GO:0003682 "chromatin binding" evidence=ISS;IDA] [GO:0003678 "DNA
helicase activity" evidence=ISS] [GO:0005700 "polytene chromosome"
evidence=IDA] [GO:0042766 "nucleosome mobilization" evidence=IDA]
[GO:0003677 "DNA binding" evidence=IDA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0008270 "zinc ion binding" evidence=IEA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0007517 "muscle
organ development" evidence=IMP] [GO:0048813 "dendrite
morphogenesis" evidence=IMP] [GO:0031491 "nucleosome binding"
evidence=IDA] [GO:0000122 "negative regulation of transcription
from RNA polymerase II promoter" evidence=IDA] [GO:0070615
"nucleosome-dependent ATPase activity" evidence=IDA]
InterPro:IPR001841 InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 InterPro:IPR001965 InterPro:IPR002464
InterPro:IPR012957 InterPro:IPR012958 InterPro:IPR019787
Pfam:PF00176 Pfam:PF00271 Pfam:PF00628 Pfam:PF08073 Pfam:PF08074
PROSITE:PS00690 PROSITE:PS50013 PROSITE:PS50016 PROSITE:PS51194
SMART:SM00184 SMART:SM00249 SMART:SM00298 SMART:SM00490
Pfam:PF00385 GO:GO:0005524 EMBL:AE014296 GO:GO:0046872
GO:GO:0003677 GO:GO:0008270 GO:GO:0006351 GO:GO:0000122
GO:GO:0048813 GO:GO:0007517 Gene3D:3.30.40.10 InterPro:IPR011011
InterPro:IPR013083 SUPFAM:SSF57903 GO:GO:0004003 InterPro:IPR019786
PROSITE:PS01359 GO:GO:0005700 GO:GO:0042766 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0031491 GO:GO:0016581 InterPro:IPR023780
PROSITE:PS00598 GeneTree:ENSGT00560000076896 InterPro:IPR009462
InterPro:IPR009463 Pfam:PF06461 Pfam:PF06465 KO:K11643
EMBL:AF119716 EMBL:AY113368 RefSeq:NP_001163476.1
RefSeq:NP_649154.2 UniGene:Dm.28317 ProteinModelPortal:O97159
SMR:O97159 DIP:DIP-22862N IntAct:O97159 MINT:MINT-864813
STRING:O97159 PaxDb:O97159 EnsemblMetazoa:FBtr0074919
EnsemblMetazoa:FBtr0302046 GeneID:40170 KEGG:dme:Dmel_CG8103
CTD:40170 FlyBase:FBgn0262519 InParanoid:O97159 OrthoDB:EOG4T76J4
ChiTaRS:Mi-2 GenomeRNAi:40170 NextBio:817384 Bgee:O97159
GermOnline:CG8103 Uniprot:O97159
Length = 1982
Score = 330 (121.2 bits), Expect = 3.6e-28, P = 3.6e-28
Identities = 70/124 (56%), Positives = 85/124 (68%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL L +L++LKA HRVLIF+QMT+MLD+LE FL + Y R+DG RQ +
Sbjct: 1052 GKLVLLSKMLKQLKAQNHRVLIFSQMTKMLDILEDFLEGEQYKYERIDGGITGTLRQEAI 1111
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+RFN A+ F F+LSTR+GG+GINL ADTV+ YDSDWNP D QA R HRIGQ V
Sbjct: 1112 DRFNAPGAQQFVFLLSTRAGGLGINLATADTVIIYDSDWNPHNDIQAFSRAHRIGQANKV 1171
Query: 157 HIYR 160
IYR
Sbjct: 1172 MIYR 1175
>UNIPROTKB|F1SDX0 [details] [associations]
symbol:ERCC6 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0047485 "protein N-terminus binding" evidence=IEA]
[GO:0045494 "photoreceptor cell maintenance" evidence=IEA]
[GO:0032786 "positive regulation of DNA-dependent transcription,
elongation" evidence=IEA] [GO:0032403 "protein complex binding"
evidence=IEA] [GO:0010332 "response to gamma radiation"
evidence=IEA] [GO:0010224 "response to UV-B" evidence=IEA]
[GO:0010165 "response to X-ray" evidence=IEA] [GO:0009636 "response
to toxic substance" evidence=IEA] [GO:0008630 "intrinsic apoptotic
signaling pathway in response to DNA damage" evidence=IEA]
[GO:0008094 "DNA-dependent ATPase activity" evidence=IEA]
[GO:0008023 "transcription elongation factor complex" evidence=IEA]
[GO:0008022 "protein C-terminus binding" evidence=IEA] [GO:0007257
"activation of JUN kinase activity" evidence=IEA] [GO:0007256
"activation of JNKK activity" evidence=IEA] [GO:0006290 "pyrimidine
dimer repair" evidence=IEA] [GO:0006284 "base-excision repair"
evidence=IEA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IEA] [GO:0005730 "nucleolus"
evidence=IEA] [GO:0003682 "chromatin binding" evidence=IEA]
[GO:0000303 "response to superoxide" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0003677 "DNA binding" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271
PROSITE:PS51194 SMART:SM00490 GO:GO:0005524 GO:GO:0008630
GO:GO:0005730 GO:GO:0006284 GO:GO:0003677 GO:GO:0009636
GO:GO:0003682 GO:GO:0045494 GO:GO:0010332 GO:GO:0004386
GO:GO:0010165 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 GO:GO:0032786 GO:GO:0006290 GO:GO:0007256
GeneTree:ENSGT00590000083118 KO:K10841 OMA:NGEMQIF GO:GO:0000303
EMBL:CT990602 EMBL:CT990615 RefSeq:XP_003483566.1
Ensembl:ENSSSCT00000011375 GeneID:100738583 KEGG:ssc:100738583
Uniprot:F1SDX0
Length = 1481
Score = 328 (120.5 bits), Expect = 4.0e-28, P = 4.0e-28
Identities = 61/123 (49%), Positives = 87/123 (70%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK+ ++ +L+ G RVL+F+Q +MLD+LE FL + YL++DGTT + RQ L+
Sbjct: 828 GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTTIASRQPLI 887
Query: 98 ERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVH 157
R+N DA IF F+L+TR GG+G+NLTGA+ V+ YD DWNP+ D QA++R RIGQ + V
Sbjct: 888 TRYNEDASIFVFLLTTRVGGLGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVT 947
Query: 158 IYR 160
+YR
Sbjct: 948 VYR 950
>UNIPROTKB|F1NS62 [details] [associations]
symbol:CHD1L "Uncharacterized protein" species:9031 "Gallus
gallus" [GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP
binding" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0005634 "nucleus" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005886 "plasma membrane"
evidence=IEA] [GO:0006338 "chromatin remodeling" evidence=IEA]
[GO:0006974 "response to DNA damage stimulus" evidence=IEA]
InterPro:IPR000330 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS51194
SMART:SM00490 GO:GO:0005886 GO:GO:0005524 GO:GO:0005634
GO:GO:0005737 GO:GO:0003677 GO:GO:0006974 GO:GO:0006338
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:AADN02037964
EMBL:AADN02037962 EMBL:AADN02037963 IPI:IPI00573125
Ensembl:ENSGALT00000024254 Uniprot:F1NS62
Length = 895
Score = 324 (119.1 bits), Expect = 4.7e-28, P = 4.7e-28
Identities = 64/123 (52%), Positives = 89/123 (72%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L L GGHRVL+F+QMT++LD+L+ ++++ G+ Y RLDG+ + ++R + +
Sbjct: 347 GKLCLLDKLLSFLYDGGHRVLLFSQMTKLLDILQDYMDYRGYSYERLDGSVRGEERHLAI 406
Query: 98 ERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVH 157
+ F IF F+LSTR+GGVG+NLT ADTV+F DSD+NP D QA R HRIGQ + V
Sbjct: 407 KNFGQQP-IFVFLLSTRAGGVGMNLTAADTVIFTDSDFNPQNDLQAIARAHRIGQHKPVK 465
Query: 158 IYR 160
I R
Sbjct: 466 IIR 468
>POMBASE|SPCC1620.14c [details] [associations]
symbol:snf22 "ATP-dependent DNA helicase Snf22"
species:4896 "Schizosaccharomyces pombe" [GO:0000122 "negative
regulation of transcription from RNA polymerase II promoter"
evidence=IEP] [GO:0000790 "nuclear chromatin" evidence=IC]
[GO:0000991 "core RNA polymerase II binding transcription factor
activity" evidence=ISO] [GO:0003677 "DNA binding" evidence=IC]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=ISM]
[GO:0005524 "ATP binding" evidence=IC] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005819 "spindle" evidence=IDA] [GO:0006338
"chromatin remodeling" evidence=IGI] [GO:0007131 "reciprocal
meiotic recombination" evidence=IMP] [GO:0010972 "negative
regulation of G2/M transition of mitotic cell cycle" evidence=IMP]
[GO:0016514 "SWI/SNF complex" evidence=IDA] [GO:0043044
"ATP-dependent chromatin remodeling" evidence=ISS] [GO:0045944
"positive regulation of transcription from RNA polymerase II
promoter" evidence=IEP] [GO:1900389 "regulation of glucose import
by regulation of transcription from RNA polymerase II promoter"
evidence=IMP] [GO:1900400 "regulation of iron ion import by
regulation of transcription from RNA polymerase II promoter"
evidence=IMP] InterPro:IPR000330 InterPro:IPR001487
InterPro:IPR001650 InterPro:IPR014978 InterPro:IPR017956
Pfam:PF00176 Pfam:PF00271 Pfam:PF00439 Pfam:PF08880 PRINTS:PR00503
PROSITE:PS50014 PROSITE:PS51194 SMART:SM00297 SMART:SM00384
SMART:SM00490 SMART:SM00951 PomBase:SPCC1620.14c GO:GO:0005524
GO:GO:0005819 EMBL:CU329672 GenomeReviews:CU329672_GR GO:GO:0003677
GO:GO:0045944 GO:GO:0000122 GO:GO:0000790 GO:GO:0016514
GO:GO:0004003 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0043044 GO:GO:0000991 Gene3D:1.20.920.10
SUPFAM:SSF47370 PROSITE:PS00633 InterPro:IPR018359 GO:GO:0007131
InterPro:IPR014012 PROSITE:PS51204 GO:GO:0010972
HOGENOM:HOG000172362 KO:K11786 OrthoDB:EOG4D565R EMBL:AB162437
PIR:T41628 RefSeq:NP_588472.2 ProteinModelPortal:O94421
DIP:DIP-48377N STRING:O94421 PRIDE:O94421
EnsemblFungi:SPCC1620.14c.1 GeneID:2538881 KEGG:spo:SPCC1620.14c
NextBio:20800061 GO:GO:1900389 GO:GO:1900400 Uniprot:O94421
Length = 1680
Score = 327 (120.2 bits), Expect = 6.1e-28, P = 6.1e-28
Identities = 65/125 (52%), Positives = 89/125 (71%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK + LD IL KL GH+ L+F QMT+++ ++E +L YLRLDG+TK D R L+
Sbjct: 1187 GKFELLDRILPKLFLTGHKTLMFFQMTQIMTIMEDYLRSKNWKYLRLDGSTKSDDRCSLL 1246
Query: 98 ERFNMDAR--IFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRD 155
+FN D + ++ F+LSTR+GG+G+NL ADTV+ +D+DWNP D QAQDR HRIGQT++
Sbjct: 1247 AQFN-DPKSDVYIFMLSTRAGGLGLNLQTADTVIIFDTDWNPHQDLQAQDRAHRIGQTKE 1305
Query: 156 VHIYR 160
V I R
Sbjct: 1306 VRILR 1310
>UNIPROTKB|E2QSK6 [details] [associations]
symbol:ERCC6L "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0047485 "protein N-terminus binding"
evidence=IEA] [GO:0045494 "photoreceptor cell maintenance"
evidence=IEA] [GO:0032786 "positive regulation of DNA-dependent
transcription, elongation" evidence=IEA] [GO:0032403 "protein
complex binding" evidence=IEA] [GO:0010332 "response to gamma
radiation" evidence=IEA] [GO:0010224 "response to UV-B"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0009636 "response to toxic substance" evidence=IEA] [GO:0008630
"intrinsic apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0008094 "DNA-dependent ATPase activity"
evidence=IEA] [GO:0008023 "transcription elongation factor complex"
evidence=IEA] [GO:0008022 "protein C-terminus binding"
evidence=IEA] [GO:0007257 "activation of JUN kinase activity"
evidence=IEA] [GO:0007256 "activation of JNKK activity"
evidence=IEA] [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
[GO:0006284 "base-excision repair" evidence=IEA] [GO:0006283
"transcription-coupled nucleotide-excision repair" evidence=IEA]
[GO:0005730 "nucleolus" evidence=IEA] [GO:0003682 "chromatin
binding" evidence=IEA] [GO:0000303 "response to superoxide"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0004386
"helicase activity" evidence=IEA] [GO:0003677 "DNA binding"
evidence=IEA] InterPro:IPR000330 InterPro:IPR001650 Pfam:PF00176
Pfam:PF00271 PROSITE:PS51194 SMART:SM00490 GO:GO:0005524
GO:GO:0008630 GO:GO:0005730 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 GO:GO:0045494 GO:GO:0010332
GO:GO:0004386 GO:GO:0010165 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 GO:GO:0010224 GO:GO:0007257 GO:GO:0006283
GO:GO:0008094 GO:GO:0008023 GO:GO:0032786 GO:GO:0006290
GO:GO:0007256 GeneTree:ENSGT00590000083118 CTD:2074 KO:K10841
OMA:NGEMQIF GO:GO:0000303 EMBL:AAEX03015368 RefSeq:XP_534944.2
UniGene:Cfa.1909 Ensembl:ENSCAFT00000010674 GeneID:477747
KEGG:cfa:477747 NextBio:20853169 Uniprot:E2QSK6
Length = 1486
Score = 326 (119.8 bits), Expect = 6.6e-28, P = 6.6e-28
Identities = 60/123 (48%), Positives = 86/123 (69%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK+ ++ +L+ G RVL+F+Q +MLD+LE FL + YL++DGTT + RQ L+
Sbjct: 834 GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYSYLKMDGTTAIASRQPLI 893
Query: 98 ERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVH 157
R+N D IF F+L+TR GG+G+NLTGA+ V+ YD DWNP+ D QA++R RIGQ + V
Sbjct: 894 TRYNEDTSIFVFLLTTRVGGIGVNLTGANRVIIYDPDWNPSTDTQARERAWRIGQKKQVT 953
Query: 158 IYR 160
+YR
Sbjct: 954 VYR 956
>UNIPROTKB|Q03468 [details] [associations]
symbol:ERCC6 "DNA excision repair protein ERCC-6"
species:9606 "Homo sapiens" [GO:0000303 "response to superoxide"
evidence=IEA] [GO:0006290 "pyrimidine dimer repair" evidence=IEA]
[GO:0007256 "activation of JNKK activity" evidence=IEA] [GO:0007257
"activation of JUN kinase activity" evidence=IEA] [GO:0008630
"intrinsic apoptotic signaling pathway in response to DNA damage"
evidence=IEA] [GO:0009636 "response to toxic substance"
evidence=IEA] [GO:0010165 "response to X-ray" evidence=IEA]
[GO:0010224 "response to UV-B" evidence=IEA] [GO:0010332 "response
to gamma radiation" evidence=IEA] [GO:0045494 "photoreceptor cell
maintenance" evidence=IEA] [GO:0006366 "transcription from RNA
polymerase II promoter" evidence=NAS] [GO:0005515 "protein binding"
evidence=IPI] [GO:0003677 "DNA binding" evidence=IDA] [GO:0003678
"DNA helicase activity" evidence=IDA] [GO:0008094 "DNA-dependent
ATPase activity" evidence=IDA] [GO:0047485 "protein N-terminus
binding" evidence=IPI] [GO:0008022 "protein C-terminus binding"
evidence=IPI] [GO:0032784 "regulation of DNA-dependent
transcription, elongation" evidence=IDA] [GO:0008023 "transcription
elongation factor complex" evidence=IDA] [GO:0032786 "positive
regulation of DNA-dependent transcription, elongation"
evidence=IDA] [GO:0006283 "transcription-coupled
nucleotide-excision repair" evidence=IMP;TAS] [GO:0032403 "protein
complex binding" evidence=IDA] [GO:0009411 "response to UV"
evidence=IDA] [GO:0005524 "ATP binding" evidence=IDA] [GO:0005654
"nucleoplasm" evidence=IDA;TAS] [GO:0005730 "nucleolus"
evidence=IDA] [GO:0005634 "nucleus" evidence=IDA] [GO:0006979
"response to oxidative stress" evidence=IDA] [GO:0006284
"base-excision repair" evidence=IMP] [GO:0003682 "chromatin
binding" evidence=IDA] [GO:0006281 "DNA repair" evidence=TAS]
[GO:0006289 "nucleotide-excision repair" evidence=TAS]
Reactome:REACT_216 InterPro:IPR000330 InterPro:IPR001650
Pfam:PF00176 Pfam:PF00271 PROSITE:PS51194 SMART:SM00490
GO:GO:0005524 GO:GO:0009411 GO:GO:0008630 GO:GO:0006979
GO:GO:0005730 GO:GO:0032403 GO:GO:0006284 GO:GO:0003677
GO:GO:0009636 GO:GO:0003682 Orphanet:279 GO:GO:0045494
GO:GO:0010332 GO:GO:0006366 GO:GO:0004386 GO:GO:0010165
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
GO:GO:0010224 GO:GO:0007257 GO:GO:0006283 GO:GO:0008094
GO:GO:0008023 EMBL:CH471187 GO:GO:0032786 GO:GO:0006290
GO:GO:0007256 Orphanet:1466 EMBL:L04791 EMBL:AY204752 EMBL:AL138760
IPI:IPI00414779 PIR:A44224 RefSeq:NP_000115.1 UniGene:Hs.654449
ProteinModelPortal:Q03468 SMR:Q03468 DIP:DIP-193N IntAct:Q03468
MINT:MINT-1193928 STRING:Q03468 PhosphoSite:Q03468 DMDM:416959
PaxDb:Q03468 PRIDE:Q03468 Ensembl:ENST00000355832 GeneID:2074
KEGG:hsa:2074 UCSC:uc001jhr.4 CTD:2074 GeneCards:GC10M050663
HGNC:HGNC:3438 MIM:133540 MIM:214150 MIM:278800 MIM:600630
MIM:609413 MIM:613761 neXtProt:NX_Q03468 Orphanet:90321
Orphanet:90322 Orphanet:90324 Orphanet:1569 Orphanet:178338
PharmGKB:PA27852 HOGENOM:HOG000170952 HOVERGEN:HBG051502
InParanoid:Q03468 KO:K10841 OMA:NGEMQIF OrthoDB:EOG476JZF
PhylomeDB:Q03468 ChiTaRS:ERCC6 GenomeRNAi:2074 NextBio:8437
ArrayExpress:Q03468 Bgee:Q03468 CleanEx:HS_ERCC6
Genevestigator:Q03468 GermOnline:ENSG00000032514 GO:GO:0000303
Uniprot:Q03468
Length = 1493
Score = 326 (119.8 bits), Expect = 6.6e-28, P = 6.6e-28
Identities = 61/123 (49%), Positives = 86/123 (69%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK+ ++ +L+ G RVL+F+Q +MLD+LE FL + YL++DGTT + RQ L+
Sbjct: 839 GKMIVVESLLKIWHKQGQRVLLFSQSRQMLDILEVFLRAQKYTYLKMDGTTTIASRQPLI 898
Query: 98 ERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVH 157
R+N D IF F+L+TR GG+G+NLTGA+ VV YD DWNP+ D QA++R RIGQ + V
Sbjct: 899 TRYNEDTSIFVFLLTTRVGGLGVNLTGANRVVIYDPDWNPSTDTQARERAWRIGQKKQVT 958
Query: 158 IYR 160
+YR
Sbjct: 959 VYR 961
>WB|WBGene00007053 [details] [associations]
symbol:chd-7 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003682
"chromatin binding" evidence=IEA] [GO:0003676 "nucleic acid
binding" evidence=IEA] [GO:0004386 "helicase activity"
evidence=IEA] [GO:0016817 "hydrolase activity, acting on acid
anhydrides" evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001005 InterPro:IPR001650 InterPro:IPR006576
Pfam:PF00176 Pfam:PF00271 Pfam:PF07533 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 SMART:SM00592
SMART:SM00717 Pfam:PF00385 GO:GO:0005524 GO:GO:0005634
GO:GO:0003677 GO:GO:0003682 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR017877 PROSITE:PS50090
InterPro:IPR023780 KO:K14437 GeneTree:ENSGT00560000077077
EMBL:FO080504 EMBL:FO080107 RefSeq:NP_491426.2 PaxDb:O61845
EnsemblMetazoa:T04D1.4 GeneID:172079 KEGG:cel:CELE_T04D1.4
UCSC:T04D1.4 CTD:172079 WormBase:T04D1.4 HOGENOM:HOG000213105
InParanoid:O61845 OMA:LLAFRME NextBio:873933 Uniprot:O61845
Length = 2967
Score = 329 (120.9 bits), Expect = 7.6e-28, P = 7.6e-28
Identities = 66/130 (50%), Positives = 92/130 (70%)
Query: 32 LIQYDCGKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVD 91
LIQ GK+ ++ +L KL+ GH+VLIF+QM ++LD+LE FL + + R+DG + D
Sbjct: 1516 LIQAS-GKVVLIEKLLPKLRKDGHKVLIFSQMVKVLDLLEEFLISMSYPFERIDGNVRGD 1574
Query: 92 QRQVLMERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRI 150
RQ ++RF+ + + F F+L TR+GG+GINLT ADTV+ +DSDWNP D QAQ RCHRI
Sbjct: 1575 LRQAAIDRFSKENSDRFVFLLCTRAGGLGINLTAADTVIIFDSDWNPQNDLQAQARCHRI 1634
Query: 151 GQTRDVHIYR 160
GQ + V +YR
Sbjct: 1635 GQKKLVKVYR 1644
>WB|WBGene00010369 [details] [associations]
symbol:chd-1 species:6239 "Caenorhabditis elegans"
[GO:0003677 "DNA binding" evidence=IEA] [GO:0005524 "ATP binding"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0003676
"nucleic acid binding" evidence=IEA] [GO:0004386 "helicase
activity" evidence=IEA] [GO:0008026 "ATP-dependent helicase
activity" evidence=IEA] [GO:0009792 "embryo development ending in
birth or egg hatching" evidence=IMP] InterPro:IPR000330
InterPro:IPR000953 InterPro:IPR001650 InterPro:IPR002464
Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 Pfam:PF00385
GO:GO:0005524 GO:GO:0005634 GO:GO:0009792 GO:GO:0003677
InterPro:IPR016197 SUPFAM:SSF54160 eggNOG:COG0553
InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192 GO:GO:0008026
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 GeneTree:ENSGT00560000076896
KO:K11367 HOGENOM:HOG000207917 OMA:VERVIKW EMBL:Z92970 PIR:T23056
RefSeq:NP_491994.2 ProteinModelPortal:O17909 SMR:O17909
STRING:O17909 PaxDb:O17909 EnsemblMetazoa:H06O01.2 GeneID:172432
KEGG:cel:CELE_H06O01.2 UCSC:H06O01.2 CTD:172432 WormBase:H06O01.2
InParanoid:O17909 NextBio:875487 Uniprot:O17909
Length = 1461
Score = 325 (119.5 bits), Expect = 8.2e-28, P = 8.2e-28
Identities = 65/124 (52%), Positives = 84/124 (67%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L +LK GHRVLIF+QM MLD+L+ +L RLDG+ + D R+ +
Sbjct: 711 GKLILLDKLLCRLKDKGHRVLIFSQMVMMLDILQEYLQLRRFPSQRLDGSMRADLRKQAL 770
Query: 98 ERFNMDARI-FCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ +N F F+LSTR+GG+GINL ADTV+ +DSDWNP D QA R HRIGQT+ V
Sbjct: 771 DHYNAPGSTDFAFLLSTRAGGLGINLATADTVIIFDSDWNPQNDLQAMSRAHRIGQTKTV 830
Query: 157 HIYR 160
+IYR
Sbjct: 831 NIYR 834
>POMBASE|SPAC3G6.01 [details] [associations]
symbol:hrp3 "ATP-dependent DNA helicase Hrp3"
species:4896 "Schizosaccharomyces pombe" [GO:0000070 "mitotic
sister chromatid segregation" evidence=IMP] [GO:0000790 "nuclear
chromatin" evidence=NAS] [GO:0003677 "DNA binding" evidence=IEA]
[GO:0004003 "ATP-dependent DNA helicase activity" evidence=IDA]
[GO:0005515 "protein binding" evidence=IPI] [GO:0005524 "ATP
binding" evidence=IC] [GO:0005634 "nucleus" evidence=IDA]
[GO:0006338 "chromatin remodeling" evidence=NAS] [GO:0008094
"DNA-dependent ATPase activity" evidence=ISM] [GO:0030466
"chromatin silencing at silent mating-type cassette" evidence=IMP]
[GO:0031934 "mating-type region heterochromatin" evidence=IDA]
[GO:0045944 "positive regulation of transcription from RNA
polymerase II promoter" evidence=IEP] [GO:0060303 "regulation of
nucleosome density" evidence=IMP] [GO:0030702 "chromatin silencing
at centromere" evidence=IMP] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS50013 PROSITE:PS51194 SMART:SM00298 SMART:SM00490
PomBase:SPAC3G6.01 Pfam:PF00385 GO:GO:0005524 EMBL:CU329670
GenomeReviews:CU329670_GR GO:GO:0003677 GO:GO:0045944 GO:GO:0006351
GO:GO:0006338 GO:GO:0030466 GO:GO:0000790 GO:GO:0000070
GO:GO:0004003 GO:GO:0031934 InterPro:IPR016197 SUPFAM:SSF54160
eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR023780 InterPro:IPR023779 PROSITE:PS00598
InterPro:IPR025260 Pfam:PF13907 KO:K11367 HOGENOM:HOG000207917
OrthoDB:EOG4TF3TB GO:GO:0060303 PIR:T38720 RefSeq:NP_594967.1
ProteinModelPortal:O14139 MINT:MINT-4670837 STRING:O14139
EnsemblFungi:SPAC3G6.01.1 GeneID:2543064 KEGG:spo:SPAC3G6.01
OMA:HINGSST NextBio:20804092 Uniprot:O14139
Length = 1388
Score = 324 (119.1 bits), Expect = 9.7e-28, P = 9.7e-28
Identities = 64/124 (51%), Positives = 85/124 (68%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK+ LD +L +L+ GHRVLIF+QM RMLD+L +L+ G+ + RLDGT R+ +
Sbjct: 690 GKMVLLDKLLSRLRRDGHRVLIFSQMVRMLDILGDYLSLRGYPHQRLDGTVPAAVRRTSI 749
Query: 98 ERFNM-DARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN ++ F F+LSTR+GG+GINL ADTV+ +DSDWNP D QA R HRIGQ V
Sbjct: 750 DHFNAPNSPDFVFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHV 809
Query: 157 HIYR 160
+YR
Sbjct: 810 MVYR 813
>UNIPROTKB|F1MFS2 [details] [associations]
symbol:CHD1L "Chromodomain-helicase-DNA-binding protein
1-like" species:9913 "Bos taurus" [GO:0006974 "response to DNA
damage stimulus" evidence=IEA] [GO:0006338 "chromatin remodeling"
evidence=IEA] [GO:0005886 "plasma membrane" evidence=IEA]
[GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008026 "ATP-dependent helicase activity"
evidence=IEA] [GO:0005524 "ATP binding" evidence=IEA] [GO:0003677
"DNA binding" evidence=IEA] InterPro:IPR000330 InterPro:IPR001650
InterPro:IPR002464 Pfam:PF00176 Pfam:PF00271 PROSITE:PS00690
PROSITE:PS51194 SMART:SM00490 GO:GO:0005886 GO:GO:0005524
GO:GO:0005634 GO:GO:0005737 GO:GO:0003677 GO:GO:0006974
GO:GO:0006338 InterPro:IPR014001 SMART:SM00487 PROSITE:PS51192
InterPro:IPR002589 PROSITE:PS51154 GO:GO:0008026 IPI:IPI00710168
OMA:TCQTIAL GeneTree:ENSGT00670000098110 EMBL:DAAA02007335
Ensembl:ENSBTAT00000027762 Uniprot:F1MFS2
Length = 896
Score = 321 (118.1 bits), Expect = 9.8e-28, P = 9.8e-28
Identities = 63/123 (51%), Positives = 89/123 (72%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GKL LD +L L + GHRVL+F+QMT+MLD+L+ +L++ G+ Y R+DG+ + ++R + +
Sbjct: 349 GKLHLLDKLLAFLYSKGHRVLLFSQMTQMLDILQDYLDYRGYSYERVDGSVRGEERHLAI 408
Query: 98 ERFNMDARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDVH 157
+ F IF F LSTR+GGVG+NLT ADTV+F+DSD+NP D QA R HRIGQ + V
Sbjct: 409 KNFGQQP-IFTF-LSTRAGGVGMNLTAADTVIFFDSDFNPQNDLQAAARAHRIGQNKSVK 466
Query: 158 IYR 160
+ R
Sbjct: 467 VIR 469
>CGD|CAL0001390 [details] [associations]
symbol:orf19.3035 species:5476 "Candida albicans" [GO:0000124
"SAGA complex" evidence=IEA] [GO:0031934 "mating-type region
heterochromatin" evidence=IEA] [GO:0046695 "SLIK (SAGA-like)
complex" evidence=IEA] [GO:0005739 "mitochondrion" evidence=IEA]
[GO:0030874 "nucleolar chromatin" evidence=IEA] [GO:2000616
"negative regulation of histone H3-K9 acetylation" evidence=IEA]
[GO:0034401 "regulation of transcription by chromatin organization"
evidence=IEA] [GO:0071441 "negative regulation of histone H3-K14
acetylation" evidence=IEA] [GO:0006369 "termination of RNA
polymerase II transcription" evidence=IEA] [GO:0016584 "nucleosome
positioning" evidence=IEA] [GO:0006368 "transcription elongation
from RNA polymerase II promoter" evidence=IEA] [GO:0000070 "mitotic
sister chromatid segregation" evidence=IEA] [GO:0060303 "regulation
of nucleosome density" evidence=IEA] [GO:0006200 "ATP catabolic
process" evidence=IEA] [GO:0043044 "ATP-dependent chromatin
remodeling" evidence=IEA] [GO:2000104 "negative regulation of
DNA-dependent DNA replication" evidence=IEA] [GO:0042766
"nucleosome mobilization" evidence=IEA] [GO:0001178 "regulation of
transcriptional start site selection at RNA polymerase II promoter"
evidence=IEA] [GO:0006363 "termination of RNA polymerase I
transcription" evidence=IEA] [GO:0030466 "chromatin silencing at
silent mating-type cassette" evidence=IEA] [GO:0000182 "rDNA
binding" evidence=IEA] [GO:0031490 "chromatin DNA binding"
evidence=IEA] [GO:0035064 "methylated histone residue binding"
evidence=IEA] [GO:0004003 "ATP-dependent DNA helicase activity"
evidence=IEA] InterPro:IPR000330 InterPro:IPR000953
InterPro:IPR001650 Pfam:PF00176 Pfam:PF00271 PROSITE:PS50013
PROSITE:PS51194 SMART:SM00298 SMART:SM00490 CGD:CAL0001390
Pfam:PF00385 GO:GO:0005524 GO:GO:0005634 EMBL:AACQ01000017
EMBL:AACQ01000015 GO:GO:0003677 GO:GO:0004386 InterPro:IPR016197
SUPFAM:SSF54160 eggNOG:COG0553 InterPro:IPR014001 SMART:SM00487
PROSITE:PS51192 InterPro:IPR023780 InterPro:IPR023779
PROSITE:PS00598 InterPro:IPR025260 Pfam:PF13907 KO:K11367
RefSeq:XP_721262.1 RefSeq:XP_721533.1 ProteinModelPortal:Q5AI17
STRING:Q5AI17 GeneID:3636889 GeneID:3637077 KEGG:cal:CaO19.10553
KEGG:cal:CaO19.3035 Uniprot:Q5AI17
Length = 1410
Score = 324 (119.1 bits), Expect = 1.0e-27, P = 1.0e-27
Identities = 62/124 (50%), Positives = 86/124 (69%)
Query: 38 GKLQSLDVILRKLKAGGHRVLIFTQMTRMLDVLEAFLNFHGHIYLRLDGTTKVDQRQVLM 97
GK+ L+ +L +L+ GHRVLIF+QM RMLD+L ++ G+ + RLDGT +R++ +
Sbjct: 674 GKMVLLEQLLSRLRKEGHRVLIFSQMVRMLDILGDYMFIKGYQFQRLDGTVPSSKRKIAI 733
Query: 98 ERFNMD-ARIFCFILSTRSGGVGINLTGADTVVFYDSDWNPTMDAQAQDRCHRIGQTRDV 156
+ FN ++ F F+LSTR+GG+GINL ADTV+ +DSDWNP D QA R HRIGQ V
Sbjct: 734 DHFNAPGSKDFAFLLSTRAGGLGINLMTADTVIIFDSDWNPQADLQAMARAHRIGQKNHV 793
Query: 157 HIYR 160
+YR
Sbjct: 794 SVYR 797
WARNING: HSPs involving 280 database sequences were not reported due to the
limiting value of parameter B = 250.
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.329 0.141 0.432 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 160 160 0.00097 106 3 11 22 0.40 31
30 0.43 34
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 530
No. of states in DFA: 594 (63 KB)
Total size of DFA: 146 KB (2089 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:00
No. of threads or processors used: 24
Search cpu time: 13.81u 0.07s 13.88t Elapsed: 00:00:24
Total cpu time: 13.85u 0.08s 13.93t Elapsed: 00:00:26
Start: Thu Aug 15 14:29:01 2013 End: Thu Aug 15 14:29:27 2013
WARNINGS ISSUED: 2