Query psy13226
Match_columns 218
No_of_seqs 2 out of 4
Neff 1.4
Searched_HMMs 46136
Date Fri Aug 16 23:21:49 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13226.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/13226hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 PF11029 DAZAP2: DAZ associate 9.1 1.4E+02 0.0029 24.7 0.6 13 202-214 120-132 (137)
2 PF08250 Sperm_act_pep: Sperm- 7.1 2.4E+02 0.0051 14.8 0.7 7 207-213 3-9 (10)
3 PF09428 DUF2011: Fungal prote 7.1 3.9E+02 0.0085 21.4 2.3 14 160-173 87-100 (131)
4 PF11127 DUF2892: Protein of u 6.0 2E+02 0.0043 19.2 0.1 15 160-174 3-17 (66)
5 PF11972 HTH_13: HTH DNA bindi 5.6 2.2E+02 0.0048 20.3 0.2 10 170-179 40-49 (54)
6 TIGR01636 phage_rinA phage tra 3.9 4.8E+02 0.01 19.9 1.0 12 203-214 36-47 (134)
7 PF05263 DUF722: Protein of un 3.8 5E+02 0.011 20.9 1.1 13 202-215 32-44 (130)
8 KOG3816|consensus 2.7 8E+02 0.017 24.4 1.4 12 194-205 180-191 (526)
9 PF11166 DUF2951: Protein of u 2.6 1E+03 0.023 19.1 1.7 16 187-202 53-68 (98)
10 COG1216 Predicted glycosyltran 2.5 6.6E+02 0.014 20.7 0.4 12 203-214 62-73 (305)
No 1
>PF11029 DAZAP2: DAZ associated protein 2 (DAZAP2); InterPro: IPR022730 DAZ associated protein 2 has a highly conserved sequence throughout evolution including a conserved polyproline region and several SH2/SH3 binding sites. It occurs as a single copy gene with a four-exon organisation and is located on chromosome 12. It encodes a ubiquitously expressed protein and binds to DAZ and DAZL1 through DAZ repeats [, ].
Probab=9.14 E-value=1.4e+02 Score=24.72 Aligned_cols=13 Identities=38% Similarity=0.682 Sum_probs=8.3
Q ss_pred hccCCCCCCCCCC
Q psy13226 202 RKKDNNLGGGGGG 214 (218)
Q Consensus 202 rkkdnnlgggggg 214 (218)
.||.|.|+||.+|
T Consensus 120 QkK~~Ff~GGs~g 132 (137)
T PF11029_consen 120 QKKRSFFTGGSDG 132 (137)
T ss_pred eeccCeecccCCC
Confidence 4667777766554
No 2
>PF08250 Sperm_act_pep: Sperm-activating peptides; InterPro: IPR013254 The sperm-activating peptides (SAPs) are isolated in egg-conditioned media (egg jelly) of sea urchins. SAPs have several effects on sea urchin spermatozoa: stimulate sperm respiration and motility through intracellular alkalinization, transient elevation of cAMP, cGMP and Ca2+ levels in sperm cells [, ].
Probab=7.11 E-value=2.4e+02 Score=14.79 Aligned_cols=7 Identities=71% Similarity=1.332 Sum_probs=4.4
Q ss_pred CCCCCCC
Q psy13226 207 NLGGGGG 213 (218)
Q Consensus 207 nlggggg 213 (218)
+|+|||-
T Consensus 3 ~l~GgGV 9 (10)
T PF08250_consen 3 SLGGGGV 9 (10)
T ss_pred ccccCcC
Confidence 5777663
No 3
>PF09428 DUF2011: Fungal protein of unknown function (DUF2011); InterPro: IPR018555 This is a family of fungal proteins whose function is unknown.
Probab=7.06 E-value=3.9e+02 Score=21.39 Aligned_cols=14 Identities=36% Similarity=0.539 Sum_probs=9.6
Q ss_pred hhhcchhhhhhhhc
Q psy13226 160 ERQGQKMRIIRTLT 173 (218)
Q Consensus 160 E~~GQ~~riirtlt 173 (218)
-+-|.+.||+.-+-
T Consensus 87 rRPGKK~Ria~r~~ 100 (131)
T PF09428_consen 87 RRPGKKRRIAKRKR 100 (131)
T ss_pred cCccHhHHHHHHHH
Confidence 45678888876554
No 4
>PF11127 DUF2892: Protein of unknown function (DUF2892); InterPro: IPR021309 This family is conserved in bacteria. The function is not known.
Probab=6.00 E-value=2e+02 Score=19.23 Aligned_cols=15 Identities=33% Similarity=0.632 Sum_probs=11.7
Q ss_pred hhhcchhhhhhhhcc
Q psy13226 160 ERQGQKMRIIRTLTG 174 (218)
Q Consensus 160 E~~GQ~~riirtltg 174 (218)
.-+|.++|++|.+.|
T Consensus 3 ~Nvg~~dR~~R~~~G 17 (66)
T PF11127_consen 3 KNVGTTDRIVRIIIG 17 (66)
T ss_pred CCcchHHHHHHHHHH
Confidence 347889999998765
No 5
>PF11972 HTH_13: HTH DNA binding domain; InterPro: IPR021068 The proteins in this entry have not been characterised. They contain a C-terminal helix-turn-helix DNA binding domain.
Probab=5.62 E-value=2.2e+02 Score=20.34 Aligned_cols=10 Identities=70% Similarity=1.149 Sum_probs=8.6
Q ss_pred hhhccccccc
Q psy13226 170 RTLTGRGRER 179 (218)
Q Consensus 170 rtltgrgrer 179 (218)
|-+|||||-|
T Consensus 40 rEiTGr~R~R 49 (54)
T PF11972_consen 40 REITGRGRYR 49 (54)
T ss_pred eeecCCcccc
Confidence 8899999876
No 6
>TIGR01636 phage_rinA phage transcriptional activator, RinA family. This model represents a family of phage proteins, including RinA, a transcriptional activator in staphylococcal phage phi 11. This family shows similarity to ArpU, a phage-related putative autolysin regulator, and to some sporulation-specific sigma factors.
Probab=3.94 E-value=4.8e+02 Score=19.92 Aligned_cols=12 Identities=50% Similarity=0.819 Sum_probs=8.2
Q ss_pred ccCCCCCCCCCC
Q psy13226 203 KKDNNLGGGGGG 214 (218)
Q Consensus 203 kkdnnlgggggg 214 (218)
-.|.|.|||..+
T Consensus 36 ~~D~NiGg~~~~ 47 (134)
T TIGR01636 36 EADLNAGGRGQG 47 (134)
T ss_pred CCCccCCccccC
Confidence 348999876544
No 7
>PF05263 DUF722: Protein of unknown function (DUF722); InterPro: IPR007927 This entry is represented by Bacteriophage bIL285, Orf38. The characteristics of the protein distribution suggest prophage matches in addition to the phage matches.
Probab=3.83 E-value=5e+02 Score=20.89 Aligned_cols=13 Identities=38% Similarity=0.826 Sum_probs=9.2
Q ss_pred hccCCCCCCCCCCC
Q psy13226 202 RKKDNNLGGGGGGE 215 (218)
Q Consensus 202 rkkdnnlgggggge 215 (218)
.+-| |+|||....
T Consensus 32 ~~~D-NiGGgra~n 44 (130)
T PF05263_consen 32 ENDD-NIGGGRAQN 44 (130)
T ss_pred CCCC-CcccccccC
Confidence 4556 999987643
No 8
>KOG3816|consensus
Probab=2.73 E-value=8e+02 Score=24.42 Aligned_cols=12 Identities=42% Similarity=0.606 Sum_probs=5.3
Q ss_pred HHHHhhhhhccC
Q psy13226 194 EEKKKNRKRKKD 205 (218)
Q Consensus 194 eekkknrkrkkd 205 (218)
.++||+-+.+|.
T Consensus 180 De~KKKs~~~kN 191 (526)
T KOG3816|consen 180 DEKKKKSGSEKN 191 (526)
T ss_pred chhhhhhccccc
Confidence 344444444443
No 9
>PF11166 DUF2951: Protein of unknown function (DUF2951); InterPro: IPR021337 This family of proteins has no known function. It has a highly conserved sequence.
Probab=2.61 E-value=1e+03 Score=19.07 Aligned_cols=16 Identities=69% Similarity=0.941 Sum_probs=10.8
Q ss_pred hhhhHHHHHHHhhhhh
Q psy13226 187 REREKEEEEKKKNRKR 202 (218)
Q Consensus 187 rerekeeeekkknrkr 202 (218)
|+|+-.++-+++|+|-
T Consensus 53 reRe~dee~k~~n~Kn 68 (98)
T PF11166_consen 53 REREEDEENKKKNDKN 68 (98)
T ss_pred HHHHHHHHHHHHHHhh
Confidence 4566667777777763
No 10
>COG1216 Predicted glycosyltransferases [General function prediction only]
Probab=2.49 E-value=6.6e+02 Score=20.73 Aligned_cols=12 Identities=42% Similarity=0.576 Sum_probs=8.1
Q ss_pred ccCCCCCCCCCC
Q psy13226 203 KKDNNLGGGGGG 214 (218)
Q Consensus 203 kkdnnlgggggg 214 (218)
.-++|||++||-
T Consensus 62 ~~~~NlG~agg~ 73 (305)
T COG1216 62 ENGENLGFAGGF 73 (305)
T ss_pred EcCCCccchhhh
Confidence 346788887763
Done!