BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy1323
(186 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P10040|CRB_DROME Protein crumbs OS=Drosophila melanogaster GN=crb PE=1 SV=3
Length = 2146
Score = 50.4 bits (119), Expect = 6e-06, Method: Composition-based stats.
Identities = 48/182 (26%), Positives = 80/182 (43%), Gaps = 15/182 (8%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHSTSITVGEGL 67
+I+ QFRT LP+G+L + + ++ E + Y L +I G+L + + +G L
Sbjct: 1043 DINLQFRTTLPNGVLAFGTTGEKNEPVS-YILELI--NGRLNLHSSLLNKWEGVFIGSKL 1099
Query: 68 NRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLSPEE 127
N WH V V IN L A DE I + + +GG P
Sbjct: 1100 NDSNWHKVFVAINTSHLVLSA-----NDEQAIFPVGSYETANNSQPSFPRTYLGGTIPNL 1154
Query: 128 K--LHGVKYIIESFIGCIKDMVLSAGKAASDLLPIKPLIATKHEHVEEGCID----KKSP 181
K L + + +F+GC++D++++ D + TK E+V+ GC K +P
Sbjct: 1155 KSYLRHLTHQPSAFVGCMQDIMVNGKWIFPDEQDAN-ISYTKLENVQSGCPRTEQCKPNP 1213
Query: 182 CN 183
C+
Sbjct: 1214 CH 1215
>sp|Q9CS84|NRX1A_MOUSE Neurexin-1 OS=Mus musculus GN=Nrxn1 PE=1 SV=3
Length = 1514
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 36/162 (22%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKV-VHVFGKHSTSITVGEG 66
E+SFQ +TR GL++Y EG + ++ G+L++ +F ++
Sbjct: 53 EMSFQLKTRSARGLVLYFD----DEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTP 108
Query: 67 LNRDKWHSVMVR---------INVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSV 117
+N WHSV +R I+ AK + R D T+ GL
Sbjct: 109 VNDGAWHSVRIRRQFRNTTLYIDRAEAKWVEVKSKRRDMTVFSGL--------------- 153
Query: 118 VLIGGLSPEEKLHGVKYII------ESFIGCIKDMVLSAGKA 153
+GGL PE + +K + E F G I+D+ +++ +A
Sbjct: 154 -FVGGLPPELRAAALKLTLASVREREPFKGWIRDVRVNSSQA 194
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 27/178 (15%)
Query: 11 FQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVE--KGQLKVVHVFGKHSTSI--TVGEG 66
FQF+T GL++Y+S +G D +++VE KG L V G + I + +
Sbjct: 938 FQFKTTSLDGLILYNS----GDGND----FIVVELVKGYLHYVFDLGNGANLIKGSSNKP 989
Query: 67 LNRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLSPE 126
LN ++WH+VM+ + + ++D + I G DL S + IGG++ E
Sbjct: 990 LNDNQWHNVMISRDTSNLHTV-KIDTKITTQITAG-------ARNLDLKSDLYIGGVAKE 1041
Query: 127 --EKLHGVKYIIESFIGCIKDMVLSAGKAASDLLPIKPLIATKHEHVEEGCIDKKSPC 182
+ L + + E F GC+ + L+ DL+ + +E GC + C
Sbjct: 1042 TYKSLPKLVHAKEGFQGCLASVDLNG--RLPDLISDALFC---NGQIERGCEGPSTTC 1094
>sp|Q63372|NRX1A_RAT Neurexin-1 OS=Rattus norvegicus GN=Nrxn1 PE=1 SV=3
Length = 1530
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/162 (24%), Positives = 68/162 (41%), Gaps = 36/162 (22%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKV-VHVFGKHSTSITVGEG 66
E+SFQ +TR GL++Y EG + ++ G+L++ +F ++
Sbjct: 53 EMSFQLKTRSARGLVLYFD----DEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTP 108
Query: 67 LNRDKWHSVMVR---------INVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSV 117
+N WHSV +R I+ AK + R D T+ GL
Sbjct: 109 VNDGAWHSVRIRRQFRNTTLYIDRAEAKWVEVKSKRRDMTVFSGL--------------- 153
Query: 118 VLIGGLSPEEKLHGVKYII------ESFIGCIKDMVLSAGKA 153
+GGL PE + +K + E F G I+D+ +++ +A
Sbjct: 154 -FVGGLPPELRAAALKLTLASVREREPFKGWIRDVRVNSSQA 194
Score = 42.0 bits (97), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 40/146 (27%), Positives = 69/146 (47%), Gaps = 22/146 (15%)
Query: 11 FQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVE--KGQLKVVHVFGKHSTSI--TVGEG 66
FQF+T GL++Y+S +G D +++VE KG L V G + I + +
Sbjct: 954 FQFKTTSLDGLILYNS----GDGND----FIVVELVKGYLHYVFDLGNGANLIKGSSNKP 1005
Query: 67 LNRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLSPE 126
LN ++WH+VM+ + + ++D + I G DL S + IGG++ E
Sbjct: 1006 LNDNQWHNVMISRDTSNLHTV-KIDTKITTQITAG-------ARNLDLKSDLYIGGVAKE 1057
Query: 127 --EKLHGVKYIIESFIGCIKDMVLSA 150
+ L + + E F GC+ + L+
Sbjct: 1058 TYKSLPKLVHAKEGFQGCLASVDLNG 1083
>sp|Q9ULB1|NRX1A_HUMAN Neurexin-1 OS=Homo sapiens GN=NRXN1 PE=2 SV=1
Length = 1477
Score = 47.8 bits (112), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 42/169 (24%), Positives = 71/169 (42%), Gaps = 40/169 (23%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKV-VHVFGKHSTSITVGEG 66
E+SFQ +TR GL++Y EG + ++ G+L++ +F ++
Sbjct: 53 EMSFQLKTRSARGLVLYFD----DEGFCDFLELILTRGGRLQLSFSIFCAEPATLLADTP 108
Query: 67 LNRDKWHSVMVR---------INVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSV 117
+N WHSV +R I+ AK + R D T+ GL
Sbjct: 109 VNDGAWHSVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGL--------------- 153
Query: 118 VLIGGLSPEEKLHGVKYII------ESFIGCIKDMVLSAGKAASDLLPI 160
+GGL PE + +K + E F G I+D+ ++ +S +LP+
Sbjct: 154 -FVGGLPPELRAAALKLTLASVREREPFKGWIRDVRVN----SSQVLPV 197
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 27/178 (15%)
Query: 11 FQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVE--KGQLKVVHVFGKHSTSI--TVGEG 66
FQF+T GL++Y+S +G D +++VE KG L V G + I + +
Sbjct: 931 FQFKTTSLDGLILYNS----GDGND----FIVVELVKGYLHYVFDLGNGANLIKGSSNKP 982
Query: 67 LNRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLSPE 126
LN ++WH+VM+ + + ++D + I G DL S + IGG++ E
Sbjct: 983 LNDNQWHNVMISRDTSNLHTV-KIDTKITTQITAG-------ARNLDLKSDLYIGGVAKE 1034
Query: 127 --EKLHGVKYIIESFIGCIKDMVLSAGKAASDLLPIKPLIATKHEHVEEGCIDKKSPC 182
+ L + + E F GC+ + L+ DL+ + +E GC + C
Sbjct: 1035 TYKSLPKLVHAKEGFQGCLASVDLNG--RLPDLISDALFC---NGQIERGCEGPSTTC 1087
>sp|Q28146|NRX1A_BOVIN Neurexin-1 OS=Bos taurus GN=NRXN1 PE=1 SV=1
Length = 1530
Score = 45.4 bits (106), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 39/162 (24%), Positives = 67/162 (41%), Gaps = 36/162 (22%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKV-VHVFGKHSTSITVGEG 66
E+SFQ +TR GL++Y EG + ++ G+L++ +F ++
Sbjct: 53 EMSFQLKTRSARGLVLYFD----DEGFCDFLELILTRGGRLQLSFSIFCAEPATLLTDTP 108
Query: 67 LNRDKWHSVMVR---------INVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSV 117
+N WH+V +R I+ AK + R D T+ GL
Sbjct: 109 VNDGAWHNVRIRRQFRNTTLFIDQVEAKWVEVKSKRRDMTVFSGL--------------- 153
Query: 118 VLIGGLSPEEKLHGVKYII------ESFIGCIKDMVLSAGKA 153
+GGL PE + +K + E F G I+D+ +++ A
Sbjct: 154 -FVGGLPPELRAAALKLTLASVREREPFKGWIRDVRVNSSLA 194
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/178 (25%), Positives = 79/178 (44%), Gaps = 27/178 (15%)
Query: 11 FQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVE--KGQLKVVHVFGKHSTSI--TVGEG 66
FQF+T GL++Y+S +G D +++VE KG L V G + I + +
Sbjct: 954 FQFKTTSLDGLILYNS----GDGND----FIVVELVKGYLHYVFDLGNGANLIKGSSNKP 1005
Query: 67 LNRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLSPE 126
LN ++WH+VM+ + + ++D + I G DL S + IGG++ E
Sbjct: 1006 LNDNQWHNVMISRDTSNLHTV-KIDTKITTQITAG-------ARNLDLKSDLYIGGVAKE 1057
Query: 127 --EKLHGVKYIIESFIGCIKDMVLSAGKAASDLLPIKPLIATKHEHVEEGCIDKKSPC 182
+ L + + E F GC+ + L+ DL+ + +E GC + C
Sbjct: 1058 TYKSLPKLVHAKEGFQGCLASVDLNG--RLPDLISDALFC---NGQIERGCEGPSTTC 1110
>sp|Q60675|LAMA2_MOUSE Laminin subunit alpha-2 OS=Mus musculus GN=Lama2 PE=1 SV=1
Length = 3106
Score = 44.7 bits (104), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/145 (24%), Positives = 63/145 (43%), Gaps = 10/145 (6%)
Query: 9 ISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHSTSITVGEGLN 68
+ F+FRT LL+Y + +D + + V + G +KV + G TS+ + N
Sbjct: 2360 VMFKFRTFSSSALLMYLATRDLKD-----FMSVELSDGHVKVSYDLGSGMTSVVSNQNHN 2414
Query: 69 RDKWHS-VMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLSPEE 127
KW + + RI I +D+ +E + N N+G+ + GGL
Sbjct: 2415 DGKWKAFTLSRIQKQANISIVDIDSNQEENVATSSSGN-NFGLDLKADDKIYFGGLPTLR 2473
Query: 128 KLH---GVKYIIESFIGCIKDMVLS 149
L + ++ + GC+KD+ +S
Sbjct: 2474 NLSMKARPEVNVKKYSGCLKDIEIS 2498
Score = 36.2 bits (82), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 37/148 (25%), Positives = 64/148 (43%), Gaps = 16/148 (10%)
Query: 9 ISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHSTSITVGE--- 65
+ F+FRT P G+L+ S + +D + +I EK V + G+ T+I E
Sbjct: 2960 VEFEFRTTRPTGVLLGISSQK----MDGMGIEMIDEKLMFHVDNGAGRF-TAIYDAEIPG 3014
Query: 66 GLNRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLSP 125
+ +W+ V + K+ R++ D + PN+ ++D V +GG
Sbjct: 3015 HMCNGQWYKVTAK------KIKNRLELVVDGNQVDAQSPNS-ASTSADTNDPVFVGGFPG 3067
Query: 126 EEKLHGVKYIIESFIGCIKDMVLSAGKA 153
G+ I F GCI+ + L+ G A
Sbjct: 3068 GLNQFGLTTNIR-FRGCIRSLKLTKGTA 3094
>sp|P24043|LAMA2_HUMAN Laminin subunit alpha-2 OS=Homo sapiens GN=LAMA2 PE=1 SV=4
Length = 3122
Score = 43.5 bits (101), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 36/145 (24%), Positives = 61/145 (42%), Gaps = 10/145 (6%)
Query: 9 ISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHSTSITVGEGLN 68
+ F+FRT LL+Y + +D + + V + G +KV + G S+ + N
Sbjct: 2364 VMFKFRTFSSSALLMYLATRDLRD-----FMSVELTDGHIKVSYDLGSGMASVVSNQNHN 2418
Query: 69 RDKWHS-VMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLSPEE 127
KW S + RI I +D +E I N N+G+ + GGL
Sbjct: 2419 DGKWKSFTLSRIQKQANISIVDIDTNQEENIATSSSGN-NFGLDLKADDKIYFGGLPTLR 2477
Query: 128 KLH---GVKYIIESFIGCIKDMVLS 149
L + ++ + GC+KD+ +S
Sbjct: 2478 NLSMKARPEVNLKKYSGCLKDIEIS 2502
>sp|P25391|LAMA1_HUMAN Laminin subunit alpha-1 OS=Homo sapiens GN=LAMA1 PE=1 SV=2
Length = 3075
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 40/159 (25%), Positives = 73/159 (45%), Gaps = 23/159 (14%)
Query: 8 EISFQFRTRLPHGLLVY---HSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHSTSITVG 64
+I F T P+GLL+Y + KD L + + +G++KV+ G ++
Sbjct: 2328 QIIMLFNTFSPNGLLLYLGSYGTKD--------FLSIELFRGRVKVMTDLGSGPITLLTD 2379
Query: 65 EGLNRDKWHSVMVRIN-VHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSV----VL 119
N W+ + + N G + N +++ +G P G +SDL + +
Sbjct: 2380 RRYNNGTWYKIAFQRNRKQGVLAVIDAYNTSNKETKQGETP----GASSDLNRLDKDPIY 2435
Query: 120 IGGLSPEEKLHGVKYIIESFIGCIKDMVLSAGKAASDLL 158
+GGL P ++ +SF+GCIK++ +S ++ DLL
Sbjct: 2436 VGGL-PRSRVVRRGVTTKSFVGCIKNLEIS--RSTFDLL 2471
Score = 33.9 bits (76), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 33/148 (22%), Positives = 63/148 (42%), Gaps = 12/148 (8%)
Query: 9 ISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHSTSITVGEGLN 68
+ RT GL+ Y + +++ + YA+ + + G+L + GK T ++ L+
Sbjct: 2739 VELSIRTFASSGLIYYMAHQNQAD----YAV-LQLHGGRLHFMFDLGKGRTKVSHPALLS 2793
Query: 69 RDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLSPEEK 128
KWH+V + + K VD R + D G D+ + +GGL + +
Sbjct: 2794 DGKWHTV--KTDYVKRKGFITVDGRESPMVTVVGD-----GTMLDVEGLFYLGGLPSQYQ 2846
Query: 129 LHGVKYIIESFIGCIKDMVLSAGKAASD 156
+ I S CI D+ +++ + D
Sbjct: 2847 ARKIGNITHSIPACIGDVTVNSKQLDKD 2874
>sp|Q0V8T7|CTP5C_MOUSE Contactin-associated protein like 5-3 OS=Mus musculus GN=Cntnap5c
PE=2 SV=1
Length = 1305
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 64/140 (45%), Gaps = 20/140 (14%)
Query: 9 ISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKV-VHVFGKHSTSITVGEGL 67
+SFQFRT GLL+ + EG L +I+E G L++ + +H T I G GL
Sbjct: 391 VSFQFRTWNEDGLLLSTELS---EGSG--TLLLILEGGTLRLLIKKLARHGTEIFTGSGL 445
Query: 68 NRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIG---GLS 124
N WHS V I+ ++ +DN L P+T++ S G L+
Sbjct: 446 NDGMWHS--VSISARRNRVTLTLDNDA-----ASLPPDTSWLQIYSGNSYYFGGCPDNLT 498
Query: 125 PEEKLHGVKYIIESFIGCIK 144
+ L+ +K +F GC++
Sbjct: 499 DSQCLNPIK----AFQGCMR 514
>sp|Q0V8T9|CTP5A_MOUSE Contactin-associated protein like 5-1 OS=Mus musculus GN=Cntnap5a
PE=2 SV=1
Length = 1304
Score = 42.7 bits (99), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 42/85 (49%), Gaps = 8/85 (9%)
Query: 9 ISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKV-VHVFGKHSTSITVGEGL 67
+SFQFRT GLL+ + + L +I+E G L++ + +H T I G GL
Sbjct: 391 VSFQFRTWNEDGLLLSTELSEGSG-----TLLLILEGGTLRLLIKKVARHGTEILTGSGL 445
Query: 68 NRDKWHSVMVRINVHGAKLIARVDN 92
N WHS V IN ++ +DN
Sbjct: 446 NDGLWHS--VSINARRNRVTLTLDN 468
>sp|A1XQX0|NR1AA_DANRE Neurexin-1a OS=Danio rerio GN=nrxn1a PE=2 SV=1
Length = 1491
Score = 42.0 bits (97), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 46/181 (25%), Positives = 77/181 (42%), Gaps = 33/181 (18%)
Query: 11 FQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVE--KGQLKVVHVFGK--HSTSITVGEG 66
FQF+T P GL++Y+ R +G D +++VE KG L V G H
Sbjct: 920 FQFKTTSPDGLILYN----RGDGND----FIVVELVKGYLHYVSDLGNGAHLIKGNSNTP 971
Query: 67 LNRDKWHSVMVR---INVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGL 123
LN + WH+VM+ N+H K+ ++ +T T DL + +GG+
Sbjct: 972 LNDNHWHNVMISRDTNNLHTVKIDTKITTQT-----------TMGAKNLDLKGDLYVGGV 1020
Query: 124 SPE--EKLHGVKYIIESFIGCIKDMVLSAGKAASDLLPIKPLIATKHEHVEEGCIDKKSP 181
+ + + L + + E F GC+ + L+ L ++ + VE GC +
Sbjct: 1021 AKDMYKDLPKLVHSKEGFQGCLASVDLNG-----RLPDLQSDALSTAGQVERGCEGPSTT 1075
Query: 182 C 182
C
Sbjct: 1076 C 1076
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/81 (28%), Positives = 40/81 (49%), Gaps = 6/81 (7%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKV-VHVFGKHSTSITVGEG 66
E+SF +T+ HGLLVY EG + L +++ G+L + +F ++
Sbjct: 50 EMSFNMKTKSAHGLLVYFD----DEGFCDF-LELLIHNGRLSLRFSIFCAEPATVFSDTA 104
Query: 67 LNRDKWHSVMVRINVHGAKLI 87
+N +WH+V +R N L+
Sbjct: 105 VNDSRWHAVTLRRNFKNTTLV 125
Score = 32.7 bits (73), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 38/165 (23%), Positives = 71/165 (43%), Gaps = 38/165 (23%)
Query: 9 ISFQFRTRLPHGLLVYHSVKDRPEG-----------LDPYALYVIVEKGQLKVVHVFGKH 57
ISF FRT P+GLL++ K +P+ +D +A+ ++ G L ++ G
Sbjct: 491 ISFDFRTTEPNGLLLFSHGKPKPQQQKDPKSPKTLKVDFFAIEML--DGHLYLLLDMGSG 548
Query: 58 STSI-TVGEGLNRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTS---D 113
+T V + +N +W+ V + D R+ + + N S D
Sbjct: 549 TTKTRAVNKKVNDGEWYHVDF-----------QRDGRSGTISVNSIRTPYNAPGESEILD 597
Query: 114 LTSVVLIGGLSPEEKLHGVKYIIE--------SFIGCIKDMVLSA 150
L + +GGL PE++ G+ + E ++GC++D+ +
Sbjct: 598 LDDKLYLGGL-PEDRA-GLIFPTEVWTALLNYGYVGCVRDLFMDG 640
>sp|Q0V8T6|CTP5A_RAT Contactin-associated protein like 5-1 OS=Rattus norvegicus
GN=Cntnap5a PE=2 SV=1
Length = 1305
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 9 ISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKV-VHVFGKHSTSITVGEGL 67
+SFQFRT GLL+ + + L +I+E G L++ + H T I G GL
Sbjct: 391 VSFQFRTWNEDGLLLSTELSEGSG-----TLLLILEGGTLRLLIKKVAGHGTEIKTGSGL 445
Query: 68 NRDKWHSVMVRINVHGAKLIARVDN 92
N WHS V IN ++ +DN
Sbjct: 446 NDGLWHS--VSINARRNRVTLTLDN 468
>sp|Q9DDD0|NRX1A_CHICK Neurexin-1 (Fragment) OS=Gallus gallus GN=NRXN1 PE=2 SV=1
Length = 1363
Score = 41.6 bits (96), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 47/181 (25%), Positives = 81/181 (44%), Gaps = 33/181 (18%)
Query: 11 FQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVE--KGQLKVVHVFGKHSTSI--TVGEG 66
FQF+T GL++Y+S +G D +++VE KG L V G + I + +
Sbjct: 787 FQFKTTSLDGLILYNS----GDGND----FIVVELVKGYLHYVFDLGNGANLIKGSSNKP 838
Query: 67 LNRDKWHSVMVR---INVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGL 123
LN ++WH+VM+ N+H K+ ++ ++ T DL S + IGG+
Sbjct: 839 LNDNQWHNVMISRDTNNLHTVKIDTKITTQS-----------TAGARNLDLKSDLYIGGV 887
Query: 124 SPE--EKLHGVKYIIESFIGCIKDMVLSAGKAASDLLPIKPLIATKHEHVEEGCIDKKSP 181
+ E + L + + E F GC+ + L+ DL+ + +E GC +
Sbjct: 888 AKEMYKSLPKLVHAKEGFQGCLASVDLNG--RLPDLISDALFC---NGQIERGCEGPSTT 942
Query: 182 C 182
C
Sbjct: 943 C 943
>sp|Q0V8T4|CTP5C_RAT Contactin-associated protein like 5-3 OS=Rattus norvegicus
GN=Cntnap5c PE=2 SV=1
Length = 1307
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 40/85 (47%), Gaps = 8/85 (9%)
Query: 9 ISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKV-VHVFGKHSTSITVGEGL 67
+SFQFRT GLL+ + + L +I+E G L++ + H T I G GL
Sbjct: 392 VSFQFRTWNEDGLLLSTELSESSG-----TLLLILEGGTLRLLIKKVAGHGTEIITGSGL 446
Query: 68 NRDKWHSVMVRINVHGAKLIARVDN 92
N WH V IN ++ +DN
Sbjct: 447 NDGLWH--FVSINARRNRVTLTLDN 469
>sp|Q96NU0|CNT3B_HUMAN Contactin-associated protein-like 3B OS=Homo sapiens GN=CNTNAP3B
PE=2 SV=2
Length = 1288
Score = 40.8 bits (94), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/149 (25%), Positives = 64/149 (42%), Gaps = 16/149 (10%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHSTSITVGEGL 67
++FQFRT G L++ ++ G + L++ K +L + G+ ++T G GL
Sbjct: 393 SVTFQFRTWNRAGHLLFGELQ---RGSGSFVLFLKDGKLKLSLFQA-GQSPRNVTAGAGL 448
Query: 68 NRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLSPEE 127
N +WHSV ++ VD D+T ++ L V D GG
Sbjct: 449 NDGQWHSVSFSAKWSHMNVV--VD---DDTAVQPL-----VAVLIDSGDTYYFGGCLGNS 498
Query: 128 KLHGVKYIIESFIGCIKDMVLSAGKAASD 156
G K + F GC++ +++ G A D
Sbjct: 499 SGSGCKSPLGGFQGCLR--LITIGDKAVD 525
Score = 31.6 bits (70), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 23/110 (20%)
Query: 67 LNRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYG-VTSDLTSVVLIGGLSP 125
N ++WH V NV GA L +VD + + + P G V L S + IGG +
Sbjct: 871 FNDNQWHHVRAERNVKGASL--QVDQ-----LPQKMQPAPADGHVRLQLNSQLFIGGTAT 923
Query: 126 EEKLHGVKYIIESFIGCIKDMVLSAGKAASDLLPIKPLIATKHEHVEEGC 175
++ F+GCI+ + L+ A DL AT VE GC
Sbjct: 924 RQR---------GFLGCIRSLQLNG--VALDL----EERATVTPGVEPGC 958
>sp|Q0V8T5|CTP5B_RAT Contactin-associated protein like 5-2 OS=Rattus norvegicus
GN=Cntnap5b PE=2 SV=1
Length = 1292
Score = 40.8 bits (94), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 41/137 (29%), Positives = 60/137 (43%), Gaps = 14/137 (10%)
Query: 9 ISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKV-VHVFGKHSTSITVGEGL 67
+SFQFRT GLL+ + EG L +I+E G L++ + H T G L
Sbjct: 391 VSFQFRTWNEDGLLL---STELSEGSG--TLLLILESGTLRLLIKKVTGHGTESLTGRSL 445
Query: 68 NRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLSPEE 127
N +WHS V INV ++ VDN L P T+ G+ + GG
Sbjct: 446 NDGRWHS--VSINVRRNRVTLTVDNDA-----VSLAPETS-GLQIYSGNSYYFGGCPDNL 497
Query: 128 KLHGVKYIIESFIGCIK 144
+ I++F GC++
Sbjct: 498 TVSQCLNPIKAFQGCMR 514
>sp|Q9BZ76|CNTP3_HUMAN Contactin-associated protein-like 3 OS=Homo sapiens GN=CNTNAP3 PE=2
SV=3
Length = 1288
Score = 40.4 bits (93), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 39/150 (26%), Positives = 67/150 (44%), Gaps = 18/150 (12%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKV-VHVFGKHSTSITVGEG 66
++FQFRT G L++ ++ G + L++ + G+LK+ + G+ ++T G G
Sbjct: 393 SVTFQFRTWNRAGHLLFGELR---RGSGSFVLFL--KDGKLKLSLFQPGQSPRNVTAGAG 447
Query: 67 LNRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLSPE 126
LN +WHSV ++ VD D+T ++ L V D GG
Sbjct: 448 LNDGQWHSVSFSAKWSHMNVV--VD---DDTAVQPL-----VAVLIDSGDTYYFGGCLDN 497
Query: 127 EKLHGVKYIIESFIGCIKDMVLSAGKAASD 156
G K + F GC++ +++ G A D
Sbjct: 498 SSGSGCKSPLGGFQGCLR--LITIGDKAVD 525
Score = 32.0 bits (71), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 33/110 (30%), Positives = 47/110 (42%), Gaps = 23/110 (20%)
Query: 67 LNRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYG-VTSDLTSVVLIGGLSP 125
N ++WH V NV GA L +VD + + + P G V L S + IGG +
Sbjct: 871 FNDNQWHHVRAERNVKGASL--QVDQ-----LPQKMQPAPADGHVRLQLNSQLFIGGTAT 923
Query: 126 EEKLHGVKYIIESFIGCIKDMVLSAGKAASDLLPIKPLIATKHEHVEEGC 175
++ F+GCI+ + L+ A DL AT VE GC
Sbjct: 924 RQR---------GFLGCIRSLQLNG--VALDL----EERATVTPGVEPGC 958
>sp|P98160|PGBM_HUMAN Basement membrane-specific heparan sulfate proteoglycan core protein
OS=Homo sapiens GN=HSPG2 PE=1 SV=4
Length = 4391
Score = 39.3 bits (90), Expect = 0.014, Method: Composition-based stats.
Identities = 37/155 (23%), Positives = 64/155 (41%), Gaps = 10/155 (6%)
Query: 9 ISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHSTSITVGEGLN 68
I + RT GLL++ V+ G + + ++ G L + G + + +N
Sbjct: 4230 IELEVRTSTASGLLLWQGVEVGEAGQGKDFISLGLQDGHLVFRYQLGSGEARLVSEDPIN 4289
Query: 69 RDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLSPEEK 128
+WH V G + +VD E ++ G P N V + V IGG
Sbjct: 4290 DGEWHRVTAL--REGRRGSIQVDG---EELVSGRSPGPNVAVNA--KGSVYIGGAPDVAT 4342
Query: 129 LHGVKYIIESFIGCIKDMVLSAGKAASDLLPIKPL 163
L G ++ GC+K++VL + + + P +PL
Sbjct: 4343 LTGGRF-SSGITGCVKNLVLHSARPGAP--PPQPL 4374
>sp|O75445|USH2A_HUMAN Usherin OS=Homo sapiens GN=USH2A PE=1 SV=3
Length = 5202
Score = 38.9 bits (89), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 39/146 (26%), Positives = 68/146 (46%), Gaps = 15/146 (10%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHSTSITVGEGL 67
EISF+FRT +GLL++ KD P+ L L + +L F + + +G
Sbjct: 1739 EISFKFRTDQLNGLLLFVYNKDGPDFLA-MELKSGILTFRLNTSLAFTQ--VDLLLGLSY 1795
Query: 68 NRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLSPEE 127
KW+ V+++ G+ + A V+ G P + S V +GG+ P+E
Sbjct: 1796 CNGKWNKVIIK--KEGSFISASVNGLMKHASESGDQPLV-------VNSPVYVGGI-PQE 1845
Query: 128 KLHGVKYII--ESFIGCIKDMVLSAG 151
L+ +++ + F GC+KD+ + G
Sbjct: 1846 LLNSYQHLCLEQGFGGCMKDVKFTRG 1871
>sp|A1XQX2|NR1BA_DANRE Neurexin-1b OS=Danio rerio GN=nrxn1b PE=2 SV=1
Length = 1470
Score = 38.5 bits (88), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 45/177 (25%), Positives = 78/177 (44%), Gaps = 25/177 (14%)
Query: 11 FQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHSTSITVG--EGLN 68
FQF+T GL++Y+S +G D A+ ++ KG L + G + I + LN
Sbjct: 900 FQFKTTSADGLILYNS----GDGNDFIAVELV--KGYLHYISDLGNGAHLIKGNSIKPLN 953
Query: 69 RDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLSPEEK 128
+ WH+VM+ + + + R+D +T G DL + +GG+ PE+
Sbjct: 954 DNHWHNVMISRDPNNLHTV-RIDTKTTSQTTLG-------AKNLDLKGDLFVGGV-PEQM 1004
Query: 129 LHGVKYII---ESFIGCIKDMVLSAGKAASDLLPIKPLIATKHEHVEEGCIDKKSPC 182
+ ++ E F GC+ + L+ DL+ + L+ +E GC S C
Sbjct: 1005 YKDLPKLVHAKEGFQGCLASVDLNG--RLPDLM-TEALVCIG--QIERGCEGPSSSC 1056
Score = 37.0 bits (84), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 52/117 (44%), Gaps = 9/117 (7%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHSTSITVGEGL 67
E+SF +T +GLLVY D D L+V V K +L +F ST + +
Sbjct: 48 EMSFSVKTTHLNGLLVYF---DDEGFCDFLELHVHVGKLRL-CFSIFCAESTCVLSDVAI 103
Query: 68 NRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNY-----GVTSDLTSVVL 119
N ++WHSV + N LI + + +E K D G+ S+L SV L
Sbjct: 104 NDNRWHSVSIMRNFRNTTLIVDDEVKWEEVKSKRRDMTVFSHLFLGGIPSELRSVSL 160
>sp|Q0V8T8|CTP5B_MOUSE Contactin-associated protein like 5-2 OS=Mus musculus GN=Cntnap5b
PE=2 SV=1
Length = 1292
Score = 38.5 bits (88), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/85 (34%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 9 ISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKV-VHVFGKHSTSITVGEGL 67
+SFQFRT GLL+ + EG L +I+E G L++ + H T G L
Sbjct: 391 VSFQFRTWNEDGLLL---STELSEGSG--TLLLILEGGTLRLLIKNVAGHGTESLTGRSL 445
Query: 68 NRDKWHSVMVRINVHGAKLIARVDN 92
N +WHS V IN ++ +DN
Sbjct: 446 NNGQWHS--VNINARRNRVTLTLDN 468
>sp|Q9P2S2|NRX2A_HUMAN Neurexin-2 OS=Homo sapiens GN=NRXN2 PE=2 SV=1
Length = 1712
Score = 38.5 bits (88), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 51/185 (27%), Positives = 82/185 (44%), Gaps = 41/185 (22%)
Query: 11 FQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVE--KGQLKVVHVFGKHSTSITVGEG-- 66
FQF+T P GLL+++S G D ++++E KG + V G + S+ G
Sbjct: 944 FQFKTTAPDGLLLFNSGN----GND----FIVIELVKGYIHYVFDLG-NGPSLMKGNSDK 994
Query: 67 -LNRDKWHSVMVRI---NVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGG 122
+N ++WH+V+V NVH K +D+RT + ++N DL + IGG
Sbjct: 995 PVNDNQWHNVVVSRDPGNVHTLK----IDSRT-------VTQHSNGARNLDLKGELYIGG 1043
Query: 123 LSPEEKLHGVKYII--ESFIGCIKDMVLSAGKAASDLLPIKPLIAT---KHEHVEEGCID 177
LS + K + + F GC+ + L+ + LIA + VE GC
Sbjct: 1044 LSKNMFSNLPKLVASRDGFQGCLASVDLNGR--------LPDLIADALHRIGQVERGCDG 1095
Query: 178 KKSPC 182
+ C
Sbjct: 1096 PSTTC 1100
Score = 33.1 bits (74), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 47/98 (47%), Gaps = 6/98 (6%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGL----DPYALYVIVEKGQLKVVHVFGKHSTSITV 63
++S +F ++ +GL++ + ++ + L D + + V L+V K ++
Sbjct: 755 DVSLRFMSQRAYGLMMATTSRESADTLRLELDGGQMKLTVNLDCLRVGCAPSKGPETLFA 814
Query: 64 GEGLNRDKWHSVMVRINVHGAKLIARVDNRTDETIIKG 101
G LN ++WH+ VR+ G L VDN T E + G
Sbjct: 815 GHKLNDNEWHT--VRVVRRGKSLQLSVDNVTVEGQMAG 850
>sp|P19137|LAMA1_MOUSE Laminin subunit alpha-1 OS=Mus musculus GN=Lama1 PE=1 SV=1
Length = 3084
Score = 38.1 bits (87), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 42/160 (26%), Positives = 71/160 (44%), Gaps = 25/160 (15%)
Query: 8 EISFQFRTRLPHGLLVY---HSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHSTSITVG 64
+I F T P+GLL Y + KD L + + +G++KV+ G ++
Sbjct: 2336 QIVILFSTFSPNGLLFYLASNGTKD--------FLSIELVRGRVKVMVDLGSGPLTLMTD 2387
Query: 65 EGLNRDKWHSVMVRINVHGAKLIARVD--NRTDETIIKGLDPNTNYGVTSDLT----SVV 118
N W+ + + N L+A D + +D+ +G P G SDL ++
Sbjct: 2388 RRYNNGTWYKIAFQRN-RKQGLLAVFDAYDTSDKETKQGETP----GAASDLNRLEKDLI 2442
Query: 119 LIGGLSPEEKLHGVKYIIESFIGCIKDMVLSAGKAASDLL 158
+GGL P K S++GCIK++ +S ++ DLL
Sbjct: 2443 YVGGL-PHSKAVRKGVSSRSYVGCIKNLEIS--RSTFDLL 2479
Score = 32.3 bits (72), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 33/159 (20%), Positives = 68/159 (42%), Gaps = 16/159 (10%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHSTSITVGEGL 67
++ RT GL+ Y + +++ + YA + +++G+L + GK T ++ L
Sbjct: 2747 QVQLSIRTFASSGLIYYVAHQNQMD----YAT-LQLQEGRLHFMFDLGKGRTKVSHPALL 2801
Query: 68 NRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLSPEE 127
+ KWH+ V+ K VD + ++ T D+ + +GGL
Sbjct: 2802 SDGKWHT--VKTEYIKRKAFMTVDGQESPSVTV-----VGNATTLDVERKLYLGGLPSHY 2854
Query: 128 KLHGVKYIIESFIGCIKDMVLSAGKAASDLLPIKPLIAT 166
+ + I S CI +++++ + D +PL A+
Sbjct: 2855 RARNIGTITHSIPACIGEIMVNGQQLDKD----RPLSAS 2889
>sp|Q63374|NRX2A_RAT Neurexin-2 OS=Rattus norvegicus GN=Nrxn2 PE=1 SV=3
Length = 1715
Score = 38.1 bits (87), Expect = 0.030, Method: Composition-based stats.
Identities = 53/185 (28%), Positives = 83/185 (44%), Gaps = 41/185 (22%)
Query: 11 FQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVE--KGQLKVVHVFGKHSTSITVGEG-- 66
FQF+T P GLL+++S G D ++++E KG + V G + S+ G
Sbjct: 947 FQFKTTAPDGLLLFNS----GNGND----FIVIELVKGYIHYVFDLG-NGPSLMKGNSDK 997
Query: 67 -LNRDKWHSVMVRI---NVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGG 122
+N ++WH+V+V NVH K +D+RT + ++N DL + IGG
Sbjct: 998 PVNDNQWHNVVVSRDPGNVHTLK----IDSRT-------VTQHSNGARNLDLKGELYIGG 1046
Query: 123 LSPEEKLHGVKYII--ESFIGCIKDMVLSAGKAASDLLPIKPLIAT---KHEHVEEGCID 177
LS + K + + F GC+ + L+ LP LIA + VE GC
Sbjct: 1047 LSKNMFSNLPKLVASRDGFQGCLASVDLNG------RLP--DLIADALHRIGQVERGCDG 1098
Query: 178 KKSPC 182
+ C
Sbjct: 1099 PSTTC 1103
Score = 32.0 bits (71), Expect = 2.4, Method: Composition-based stats.
Identities = 25/106 (23%), Positives = 49/106 (46%), Gaps = 19/106 (17%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVV------------HVFG 55
++S +F ++ +GL++ + ++ + L + ++ GQ+K+ G
Sbjct: 755 DVSLRFMSQRAYGLMMATTSRESAD-----TLRLELDGGQMKLTVNLDCLRVGCAPSAAG 809
Query: 56 KHSTSITVGEGLNRDKWHSVMVRINVHGAKLIARVDNRTDETIIKG 101
K ++ G LN ++WH+ VR+ G L VDN T E + G
Sbjct: 810 KGPETLFAGHKLNDNEWHT--VRVVRRGKSLQLSVDNVTVEGQMAG 853
>sp|Q16363|LAMA4_HUMAN Laminin subunit alpha-4 OS=Homo sapiens GN=LAMA4 PE=1 SV=4
Length = 1823
Score = 37.7 bits (86), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 39/158 (24%), Positives = 68/158 (43%), Gaps = 15/158 (9%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHSTSITVGEGL 67
+ S + RTR HG++ Y V D+ E D L++ G+L + G I E
Sbjct: 1494 QFSIRLRTRSSHGMIFY--VSDQEEN-DFMTLFLA--HGRLVYMFNVGHKKLKIRSQEKY 1548
Query: 68 NRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLSPEE 127
N WH V+ +L+ +E++ P T T + + +GG++P +
Sbjct: 1549 NDGLWHDVIFIRERSSGRLVIDGLRVLEESL-----PPTE--ATWKIKGPIYLGGVAPGK 1601
Query: 128 KLHGVK-YIIESFIGCIKDMVLSAGK--AASDLLPIKP 162
+ V+ I SF GC+ ++ L+ +AS + P
Sbjct: 1602 AVKNVQINSIYSFSGCLSNLQLNGASITSASQTFSVTP 1639
Score = 35.0 bits (79), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 42/144 (29%), Positives = 66/144 (45%), Gaps = 19/144 (13%)
Query: 8 EISFQFRTRLPHGLLVY-HSVKDRPEGLDPYALYVIVEKGQL--KVVHVFGKHSTSITVG 64
EI+F+ R R G LV+ HSV L V ++ GQ+ KV + STS+T
Sbjct: 1671 EIAFEVRPRSSSGTLVHGHSVNGE-------YLNVHMKNGQVIVKVNNGIRDFSTSVTPK 1723
Query: 65 EGLNRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLS 124
+ L +WH + V + + +L VD+ + ++ L+P D V +GG+
Sbjct: 1724 QSLCDGRWHRITVIRDSNVVQL--DVDSEVNH-VVGPLNPK-----PIDHREPVFVGGV- 1774
Query: 125 PEEKLHGVKYIIESFIGCIKDMVL 148
PE L + F GCI+ V+
Sbjct: 1775 PESLLTPRLAPSKPFTGCIRHFVI 1798
>sp|A1XQY1|NR3BA_DANRE Neurexin-3b OS=Danio rerio GN=nrxn3b PE=2 SV=1
Length = 1686
Score = 37.4 bits (85), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 22/94 (23%), Positives = 48/94 (51%), Gaps = 7/94 (7%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHSTSITVGEGL 67
++S +F ++ GLL+ + ++ + L + ++ G++K++ GK ++ G+ +
Sbjct: 719 DVSLRFMSQRAFGLLMAATSRESAD-----TLRLELDSGRVKLIVNLGKGPETLYAGQKV 773
Query: 68 NRDKWHSVMVRINVHGAKLIARVDNRTDETIIKG 101
N + WHS VR+ G + VD+ E + G
Sbjct: 774 NDNDWHS--VRVTRRGKNIKLMVDDDVAEGQMNG 805
>sp|Q0V8T3|CTP5D_RAT Contactin-associated protein like 5-4 OS=Rattus norvegicus
GN=Cntnap5d PE=2 SV=1
Length = 1305
Score = 37.0 bits (84), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 41/85 (48%), Gaps = 8/85 (9%)
Query: 9 ISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKV-VHVFGKHSTSITVGEGL 67
+SF FRT GLL+ + EG L +I++ G L++ + +H T I G L
Sbjct: 391 VSFHFRTWNEDGLLL---STELSEGSG--TLLLILDGGSLRLLIKKVARHGTEIITGSSL 445
Query: 68 NRDKWHSVMVRINVHGAKLIARVDN 92
N WHS V IN ++ +DN
Sbjct: 446 NDGLWHS--VSINARRNRVTLTLDN 468
>sp|O88278|CELR3_RAT Cadherin EGF LAG seven-pass G-type receptor 3 OS=Rattus norvegicus
GN=Celsr3 PE=2 SV=1
Length = 3313
Score = 36.2 bits (82), Expect = 0.14, Method: Composition-based stats.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 6/72 (8%)
Query: 9 ISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHST--SITVGEG 66
+S F T P GLL Y+ + E D AL ++ GQ+++ + G+ ST S TV G
Sbjct: 1530 LSLSFATVQPSGLLFYNGRLN--EKHDFLALELVA--GQVRLTYSTGESSTVVSPTVPGG 1585
Query: 67 LNRDKWHSVMVR 78
L+ +WH+V +R
Sbjct: 1586 LSDGQWHTVHLR 1597
>sp|Q00174|LAMA_DROME Laminin subunit alpha OS=Drosophila melanogaster GN=LanA PE=1 SV=2
Length = 3712
Score = 35.8 bits (81), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 35/70 (50%), Gaps = 4/70 (5%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHSTSITVGEGL 67
+I FRT P+GLL+Y K R + + A+Y++ + + + V + IT L
Sbjct: 3374 DIGISFRTERPNGLLIYAGSKQRDDFI---AVYLLDGRVTYE-IRVGAQLQAKITTEAEL 3429
Query: 68 NRDKWHSVMV 77
N WH+V V
Sbjct: 3430 NDGTWHTVEV 3439
>sp|Q5RD64|CNTP2_PONAB Contactin-associated protein-like 2 OS=Pongo abelii GN=CNTNAP2 PE=2
SV=1
Length = 1331
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Query: 9 ISFQFRTRLPHGLLVYHSVKDRPEG----LDPYALYVIVEKGQLKVVHVFGKHSTSITVG 64
+SFQFRT P+GLLV+ D L + V + Q K+ + I+ G
Sbjct: 397 VSFQFRTWNPNGLLVFSHFADNLGNVEIDLTESKVGVHINITQTKMSQI------DISSG 450
Query: 65 EGLNRDKWHSV 75
GLN +WH V
Sbjct: 451 SGLNDGQWHEV 461
>sp|Q9UHC6|CNTP2_HUMAN Contactin-associated protein-like 2 OS=Homo sapiens GN=CNTNAP2 PE=1
SV=1
Length = 1331
Score = 35.8 bits (81), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 33/71 (46%), Gaps = 10/71 (14%)
Query: 9 ISFQFRTRLPHGLLVYHSVKDRPEG----LDPYALYVIVEKGQLKVVHVFGKHSTSITVG 64
+SFQFRT P+GLLV+ D L + V + Q K+ + I+ G
Sbjct: 397 VSFQFRTWNPNGLLVFSHFADNLGNVEIDLTESKVGVHINITQTKMSQI------DISSG 450
Query: 65 EGLNRDKWHSV 75
GLN +WH V
Sbjct: 451 SGLNDGQWHEV 461
>sp|Q9Y4C0|NRX3A_HUMAN Neurexin-3 OS=Homo sapiens GN=NRXN3 PE=1 SV=4
Length = 1643
Score = 35.4 bits (80), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEG----LDPYALYVIVEKGQLKVVHVFGKHSTSITV 63
++SF+F ++ +GLLV + +D + LD + ++V +++ K ++
Sbjct: 708 DVSFRFMSQRAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNSSKGPETLYA 767
Query: 64 GEGLNRDKWHSVMVRINVHGAKLIARVDNRTDETIIKG 101
G+ LN ++WH+ VR+ G L VD+ E + G
Sbjct: 768 GQKLNDNEWHT--VRVVRRGKSLKLTVDDDVAEGTMVG 803
Score = 32.3 bits (72), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 39/144 (27%), Positives = 65/144 (45%), Gaps = 18/144 (12%)
Query: 11 FQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHSTSI--TVGEGLN 68
FQF+T P G ++++S +G D A+ ++ KG + V G I LN
Sbjct: 897 FQFKTTSPDGFILFNS----GDGNDFIAVELV--KGYIHYVFDLGNGPNVIKGNSDRPLN 950
Query: 69 RDKWHSVMV-RINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGL-SPE 126
++WH+V++ R N + L +VD + +I G N + DL L G+ S
Sbjct: 951 DNQWHNVVITRDNSNTHSL--KVDTKVVTQVINGA---KNLDLKGDLYMAGLAQGMYSNL 1005
Query: 127 EKLHGVKYIIESFIGCIKDMVLSA 150
KL + + F GC+ + L+
Sbjct: 1006 PKLVASR---DGFQGCLASVDLNG 1026
Score = 30.0 bits (66), Expect = 8.8, Method: Compositional matrix adjust.
Identities = 35/144 (24%), Positives = 68/144 (47%), Gaps = 19/144 (13%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHSTSITVGEGL 67
++SFQF+T + GLL+Y + D G+ + +V+ G++++ T++ + +
Sbjct: 50 DLSFQFKTNVSTGLLLY--LDD--GGVCDFLCLSLVD-GRVQLRFSMDCAETAVLSNKQV 104
Query: 68 NRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLSPEE 127
N WH +MV + L+ + ++ E L P Y D+ S + +GG+ +
Sbjct: 105 NDSSWHFLMVSRDRLRTVLMLDGEGQSGE-----LQPQRPY---MDVVSDLFLGGVPTDI 156
Query: 128 K-----LHGVKYIIESFIGCIKDM 146
+ L GV+ + F G I D+
Sbjct: 157 RPSALTLDGVQ-AMPGFKGLILDL 179
>sp|Q6P9K9|NRX3A_MOUSE Neurexin-3 OS=Mus musculus GN=Nrxn3 PE=1 SV=2
Length = 1571
Score = 35.4 bits (80), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEG----LDPYALYVIVEKGQLKVVHVFGKHSTSITV 63
++SF+F ++ +GLLV + +D + LD + ++V +++ K ++
Sbjct: 708 DVSFRFMSQRAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNSSKGPETLYA 767
Query: 64 GEGLNRDKWHSVMVRINVHGAKLIARVDNRTDETIIKG 101
G+ LN ++WH+ VR+ G L VD+ E + G
Sbjct: 768 GQKLNDNEWHT--VRVVRRGKSLKLTVDDDVAEGTMVG 803
>sp|P78357|CNTP1_HUMAN Contactin-associated protein 1 OS=Homo sapiens GN=CNTNAP1 PE=1 SV=1
Length = 1384
Score = 35.4 bits (80), Expect = 0.21, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLK-VVHVF--GKHSTSITVG 64
++SF FRT P G+ + + + PY V VE + VV F G ++TV
Sbjct: 808 DVSFYFRTSAPSGVFLENMGGPYCQWRRPY---VRVELNTSRDVVFAFDVGNGDENLTVH 864
Query: 65 EG---LNRDKWHSVMVRINVHGAKLIARVDNR 93
N D+WH V INV A+L RVD+R
Sbjct: 865 SDDFEFNDDEWHLVRAEINVKQARL--RVDHR 894
>sp|Q07310|NRX3A_RAT Neurexin-3 OS=Rattus norvegicus GN=Nrxn3 PE=1 SV=1
Length = 1578
Score = 35.4 bits (80), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 25/98 (25%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEG----LDPYALYVIVEKGQLKVVHVFGKHSTSITV 63
++SF+F ++ +GLLV + +D + LD + ++V +++ K ++
Sbjct: 712 DVSFRFMSQRAYGLLVATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNSSKGPETLYA 771
Query: 64 GEGLNRDKWHSVMVRINVHGAKLIARVDNRTDETIIKG 101
G+ LN ++WH+ VR+ G L VD+ E + G
Sbjct: 772 GQKLNDNEWHT--VRVVRRGKSLKLTVDDDVAEGTMVG 807
>sp|Q9CPW0|CNTP2_MOUSE Contactin-associated protein-like 2 OS=Mus musculus GN=Cntnap2 PE=1
SV=2
Length = 1332
Score = 35.0 bits (79), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 34/68 (50%), Gaps = 4/68 (5%)
Query: 9 ISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHST-SITVGEGL 67
+SFQFRT P GLL++ D L + ++ K + + + K S I+ G GL
Sbjct: 397 VSFQFRTWNPSGLLLFSHFADN---LGNVEIDLVESKVGVHINNTQTKTSQIDISSGSGL 453
Query: 68 NRDKWHSV 75
N +WH V
Sbjct: 454 NDGQWHEV 461
Score = 31.6 bits (70), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 60/147 (40%), Gaps = 28/147 (19%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVF--GKHSTSITV-- 63
+ISF F+T +P G+ + E L + K +V F G I V
Sbjct: 822 DISFYFKTLIPRGVFL--------ENLGNTDFIKLELKSATEVSFSFDVGNGPVEIVVRS 873
Query: 64 GEGLNRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGL 123
LN D+WH V NV A L +VD R + I K P + +L S + +GG
Sbjct: 874 PSPLNDDQWHRVTAERNVKQASL--QVD-RLPQQIRKA--PTEGH-TRLELYSQLFVGGA 927
Query: 124 SPEEKLHGVKYIIESFIGCIKDMVLSA 150
+ + F+GCI+ + ++
Sbjct: 928 GGQ----------QGFLGCIRSLRMNG 944
>sp|P97846|CNTP1_RAT Contactin-associated protein 1 OS=Rattus norvegicus GN=Cntnap1 PE=1
SV=1
Length = 1381
Score = 35.0 bits (79), Expect = 0.28, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 44/92 (47%), Gaps = 11/92 (11%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLK-VVHVF--GKHSTSITVG 64
++SF FRT P G+ + + + PY V VE + VV F G ++TV
Sbjct: 809 DVSFYFRTSAPSGVFLENMGGPFCQWRRPY---VRVELNTSRDVVFAFDIGNGDENLTVH 865
Query: 65 EG---LNRDKWHSVMVRINVHGAKLIARVDNR 93
N D+WH V INV A+L RVD+R
Sbjct: 866 SDDFEFNDDEWHLVRAEINVKQARL--RVDHR 895
>sp|Q91ZI0|CELR3_MOUSE Cadherin EGF LAG seven-pass G-type receptor 3 OS=Mus musculus
GN=Celsr3 PE=2 SV=2
Length = 3301
Score = 35.0 bits (79), Expect = 0.28, Method: Composition-based stats.
Identities = 43/165 (26%), Positives = 74/165 (44%), Gaps = 33/165 (20%)
Query: 9 ISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHST--SITVGEG 66
+S F T P GLL Y+ + E D AL ++ GQ+++ + G+ +T S TV G
Sbjct: 1528 LSLSFATVQPSGLLFYNGRLN--EKHDFLALELVA--GQVRLTYSTGESNTVVSPTVPGG 1583
Query: 67 LNRDKWHSVMVRI-------NVHGAK-------LIARVDNRTDETIIKGLDPNTNYGVTS 112
L+ +WH+V +R + GA+ + VD+ ++ NY +
Sbjct: 1584 LSDGQWHTVHLRYYNKPRTDALGGAQGPSKDKVAVLSVDDCNVAVALQFGAEIGNYSCAA 1643
Query: 113 -----------DLTSVVLIGGLSPEEKLHGVKYIIESFIGCIKDM 146
DLT +L+GG+ + V + + FIGC++D+
Sbjct: 1644 AGVQTSSKKSLDLTGPLLLGGVPNLPENFPVSH--KDFIGCMRDL 1686
>sp|P97927|LAMA4_MOUSE Laminin subunit alpha-4 OS=Mus musculus GN=Lama4 PE=1 SV=2
Length = 1816
Score = 35.0 bits (79), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 42/146 (28%), Positives = 66/146 (45%), Gaps = 19/146 (13%)
Query: 8 EISFQFRTRLPHGLLVY-HSVKDRPEGLDPYALYVIVEKGQL--KVVHVFGKHSTSITVG 64
EI+F+ R R G LV+ HSV L V + GQ+ KV + STS+T
Sbjct: 1664 EIAFEVRPRSSSGTLVHGHSVNGE-------YLNVHMRNGQVIVKVNNGVRDFSTSVTPK 1716
Query: 65 EGLNRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLS 124
+ L +WH + V + + +L VD+ + ++ L+P D V +GG+
Sbjct: 1717 QNLCDGRWHRITVIRDSNVVQL--DVDSEVNH-VVGPLNPK-----PVDHREPVFVGGV- 1767
Query: 125 PEEKLHGVKYIIESFIGCIKDMVLSA 150
PE L + F GCI+ V+ +
Sbjct: 1768 PESLLTPRLAPSKPFTGCIRHFVIDS 1793
>sp|Q9C0A0|CNTP4_HUMAN Contactin-associated protein-like 4 OS=Homo sapiens GN=CNTNAP4 PE=1
SV=3
Length = 1308
Score = 34.7 bits (78), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 36/67 (53%), Gaps = 6/67 (8%)
Query: 10 SFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKV-VHVFGKHSTSITVGEGLN 68
+FQFRT GLL++ ++ L + + + G+LK ++ GK + IT G LN
Sbjct: 395 TFQFRTWNKAGLLLFSELQ-----LISGGILLFLSDGKLKSNLYQPGKLPSDITAGVELN 449
Query: 69 RDKWHSV 75
+WHSV
Sbjct: 450 DGQWHSV 456
Score = 32.0 bits (71), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 36/149 (24%), Positives = 61/149 (40%), Gaps = 25/149 (16%)
Query: 5 LCREISFQFRTRLPHGLLVYH-SVKD--RPEGLDPYALYVIVEKGQLKVVHVFGKHSTSI 61
L ++SF F+T G+ + + + D R E P + + G G S+
Sbjct: 813 LSADVSFFFKTTASSGVFLENLGIADFIRIELRSPTVVTFSFDVGN-------GPFEISV 865
Query: 62 TVGEGLNRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIG 121
N ++WH V V N+ A L +VD T +T D + V L S + +G
Sbjct: 866 QSPTHFNDNQWHHVRVERNMKEASL--QVDQLTPKTQPAPADGH----VLLQLNSQLFVG 919
Query: 122 GLSPEEKLHGVKYIIESFIGCIKDMVLSA 150
G + ++ F+GCI+ + L+
Sbjct: 920 GTATRQR---------GFLGCIRSLQLNG 939
>sp|Q06561|UNC52_CAEEL Basement membrane proteoglycan OS=Caenorhabditis elegans GN=unc-52
PE=1 SV=2
Length = 3375
Score = 34.7 bits (78), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 34/144 (23%), Positives = 65/144 (45%), Gaps = 9/144 (6%)
Query: 9 ISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHSTSITVGEGLN 68
++F+F+T +G+L++ + + ++ Y IV G L + G + + E ++
Sbjct: 3209 VAFKFKTEQQNGVLLWQGQRPTVQQMEDYISVGIV-NGHLHFSYELGGGAAHLISEERVD 3267
Query: 69 RDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLSPEEK 128
K HS VR G + R+DN + + G +T ++ + +GG+ K
Sbjct: 3268 DGKEHS--VRFERKGREGQMRIDNYRE---VDGR--STGILAMLNVDGNIFVGGVPDISK 3320
Query: 129 LHGVKYIIESFIGCIKDMVLSAGK 152
G +F+GCI D+ L+ K
Sbjct: 3321 ATG-GLFSNNFVGCIADVELNGVK 3343
>sp|Q63HQ2|EGFLA_HUMAN Pikachurin OS=Homo sapiens GN=EGFLAM PE=1 SV=2
Length = 1017
Score = 34.7 bits (78), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 34/142 (23%), Positives = 56/142 (39%), Gaps = 12/142 (8%)
Query: 9 ISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHSTSITVGEGLN 68
+ +F+T GLL++ D P + + + + G L + G SI V N
Sbjct: 864 VFMRFKTTAKDGLLLWRG--DSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFN 921
Query: 69 RDKWHSV-MVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLSPEE 127
+WH V VR G + RT ++ G+ N + + +GG+ E
Sbjct: 922 DGRWHRVKAVRDGQSGKITVDDYGARTGKS--PGMMRQLN------INGALYVGGMK-EI 972
Query: 128 KLHGVKYIIESFIGCIKDMVLS 149
LH + + +GCI LS
Sbjct: 973 ALHTNRQYMRGLVGCISHFTLS 994
>sp|Q9NYQ6|CELR1_HUMAN Cadherin EGF LAG seven-pass G-type receptor 1 OS=Homo sapiens
GN=CELSR1 PE=1 SV=1
Length = 3014
Score = 34.7 bits (78), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 55/220 (25%), Positives = 94/220 (42%), Gaps = 55/220 (25%)
Query: 1 MSFRLCRE-----ISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFG 55
++FR R+ IS F T+ +GLL+Y+ + E D AL ++ E+ QL F
Sbjct: 1453 VTFRGLRQRFHFTISLTFATQERNGLLLYNGRFN--EKHDFIALEIVDEQVQL----TFS 1506
Query: 56 KHSTSITVG----EGLNRDKWHSVMVRI----NV------HGAK----LIARVDNRTDET 97
T+ TV G++ +WHSV V+ N+ HG + VD+
Sbjct: 1507 AGETTTTVAPKVPSGVSDGRWHSVQVQYYNKPNIGHLGLPHGPSGEKMAVVTVDDCDTTM 1566
Query: 98 IIKGLDPNTNYGVTS-----------DLTSVVLIGGLS--PEE-KLHGVKYIIESFIGCI 143
++ NY + DLT +L+GG+ PE+ +H F+GC+
Sbjct: 1567 AVRFGKDIGNYSCAAQGTQTGSKKSLDLTGPLLLGGVPNLPEDFPVHN-----RQFVGCM 1621
Query: 144 KDMVLSAGKAASDLLPIKPLIATKHEHVEEGCIDKKSPCN 183
+++ + GK + IA + EGC +++ C+
Sbjct: 1622 RNLSVD-GKNVD----MAGFIA--NNGTREGCAARRNFCD 1654
>sp|Q0V8T0|CNTP5_CANFA Contactin-associated protein-like 5 OS=Canis familiaris GN=CNTNAP5
PE=2 SV=1
Length = 1305
Score = 34.3 bits (77), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 62/144 (43%), Gaps = 28/144 (19%)
Query: 9 ISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLK-VVHVFGKHSTSITVGEGL 67
+SFQFRT GLL+ + EG L + +E G ++ V+ + + I G L
Sbjct: 391 VSFQFRTWNKDGLLLSTELS---EGSG--TLLLSLEGGTVRLVIQKMTERTAEILTGSSL 445
Query: 68 NRDKWHSVMVRINVHGAKLIARVDNRT-----DETIIKGLDPNTNY--GVTSDLTSVVLI 120
N WHS V IN ++ +DN D T ++ N+ Y G +LT
Sbjct: 446 NDGLWHS--VSINARRDRITLSLDNDAASPAQDTTRVQIYSGNSYYFGGCPDNLTDSQC- 502
Query: 121 GGLSPEEKLHGVKYIIESFIGCIK 144
L+P I++F GC++
Sbjct: 503 --LNP----------IKAFQGCMR 514
>sp|A3KN33|EGFLA_BOVIN Pikachurin OS=Bos taurus GN=EGFLAM PE=2 SV=1
Length = 1018
Score = 34.3 bits (77), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 34/140 (24%), Positives = 55/140 (39%), Gaps = 12/140 (8%)
Query: 11 FQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHSTSITVGEGLNRD 70
+F+T GLL++ D P + + + + G L + G SI V N
Sbjct: 867 MRFKTTAKDGLLLWRG--DSPMRPNSDFISLGLRDGALVFSYNLGSGVASIMVNGSFNDG 924
Query: 71 KWHSV-MVRINVHGAKLIARVDNRTDETIIKGLDPNTNYGVTSDLTSVVLIGGLSPEEKL 129
+WH V VR G + RT ++ G+ N + + +GG+ E L
Sbjct: 925 RWHRVKAVRDGQSGKITVDDYGARTGKS--PGMMRQLN------INGALYVGGMK-EIAL 975
Query: 130 HGVKYIIESFIGCIKDMVLS 149
H + + +GCI LS
Sbjct: 976 HTNRQYMRGLVGCISHFTLS 995
>sp|D0PRN3|NRX3A_CHICK Neurexin-3 OS=Gallus gallus PE=1 SV=1
Length = 1693
Score = 34.3 bits (77), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 24/98 (24%), Positives = 49/98 (50%), Gaps = 6/98 (6%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGL----DPYALYVIVEKGQLKVVHVFGKHSTSITV 63
++SF+F ++ +GLL+ + +D + L D + ++V +++ K ++
Sbjct: 727 DVSFRFMSQRAYGLLMATTSRDSADTLRLELDGGRVKLMVNLDCIRINCNASKGPETLYA 786
Query: 64 GEGLNRDKWHSVMVRINVHGAKLIARVDNRTDETIIKG 101
G+ LN ++WH+ VR+ G L VD+ E + G
Sbjct: 787 GQKLNDNEWHT--VRVVRRGKSLKLMVDDDVAEGTMVG 822
Score = 33.1 bits (74), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 37/73 (50%), Gaps = 5/73 (6%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKVVHVFGKHSTSITVGEGL 67
E+SFQF+T + GLL+Y G+ + +V+ G++++ T++ + +
Sbjct: 50 ELSFQFKTNVSAGLLLYFD----DGGVCDFLCLSLVD-GRIQLQFSVDCAETTVITDKQV 104
Query: 68 NRDKWHSVMVRIN 80
N WH +MV N
Sbjct: 105 NDSNWHFLMVSRN 117
>sp|O54991|CNTP1_MOUSE Contactin-associated protein 1 OS=Mus musculus GN=Cntnap1 PE=1 SV=2
Length = 1385
Score = 34.3 bits (77), Expect = 0.50, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 43/92 (46%), Gaps = 11/92 (11%)
Query: 8 EISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLK-VVHVF--GKHSTSITVG 64
++SF FRT P G+ + + PY V VE + VV F G ++TV
Sbjct: 809 DVSFYFRTSAPSGVFLENMGGPFCRWRRPY---VRVELNTSRDVVFAFDIGNGDENLTVH 865
Query: 65 EG---LNRDKWHSVMVRINVHGAKLIARVDNR 93
N D+WH V INV A+L RVD+R
Sbjct: 866 SDDFEFNDDEWHLVRAEINVKQARL--RVDHR 895
>sp|P08689|SHBG_RAT Sex hormone-binding globulin OS=Rattus norvegicus GN=Shbg PE=1 SV=1
Length = 403
Score = 33.9 bits (76), Expect = 0.64, Method: Compositional matrix adjust.
Identities = 24/85 (28%), Positives = 40/85 (47%), Gaps = 9/85 (10%)
Query: 10 SFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLKV-VHVFGKHSTSITVGEGLN 68
SF+FRT P G++ Y + + + GQL++ +H T + G LN
Sbjct: 73 SFEFRTWDPEGVIFYGDTNTEDD-----WFMLGLRDGQLEIQLHNLWARLT-VGFGPRLN 126
Query: 69 RDKWHSVMVRINVHGAKLIARVDNR 93
+WH V +++N G L+ VD +
Sbjct: 127 DGRWHPVELKMN--GDSLLLWVDGK 149
>sp|Q8WYK1|CNTP5_HUMAN Contactin-associated protein-like 5 OS=Homo sapiens GN=CNTNAP5 PE=2
SV=1
Length = 1306
Score = 33.1 bits (74), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 61/144 (42%), Gaps = 28/144 (19%)
Query: 9 ISFQFRTRLPHGLLVYHSVKDRPEGLDPYALYVIVEKGQLK-VVHVFGKHSTSITVGEGL 67
+SFQFRT GLL+ + EG L + +E G L+ V+ + I G L
Sbjct: 391 VSFQFRTWNKDGLLLSTELS---EGSG--TLLLSLEGGILRLVIQKMTERVAEILTGSNL 445
Query: 68 NRDKWHSVMVRINVHGAKLIARVDNRT-----DETIIKGLDPNTNY--GVTSDLTSVVLI 120
N WHS V IN ++ +D+ D T ++ N+ Y G +LT
Sbjct: 446 NDGLWHS--VSINARRNRITLTLDDEAAPPAPDSTWVQIYSGNSYYFGGCPDNLTDSQC- 502
Query: 121 GGLSPEEKLHGVKYIIESFIGCIK 144
L+P I++F GC++
Sbjct: 503 --LNP----------IKAFQGCMR 514
>sp|B9M3M9|MIAA2_GEOSF tRNA dimethylallyltransferase 2 OS=Geobacter sp. (strain FRC-32)
GN=miaA2 PE=3 SV=1
Length = 326
Score = 32.0 bits (71), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/78 (26%), Positives = 34/78 (43%), Gaps = 4/78 (5%)
Query: 48 LKVVHVFGKHSTSITVGEGLNRDKWHSVMVRINVHGAKLIARVDNRTDETIIKGLDPNTN 107
L+V G+ + G + + +M+ INV +L +RV+ R DE + GL
Sbjct: 169 LEVYRQTGRPMSQFRQEHGFAEEMYDCLMLGINVERQELYSRVEKRVDEMVESGLAAEVE 228
Query: 108 ----YGVTSDLTSVVLIG 121
G DL ++ IG
Sbjct: 229 ELFRLGYARDLKAMRSIG 246
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.321 0.139 0.413
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 69,589,900
Number of Sequences: 539616
Number of extensions: 2835011
Number of successful extensions: 6876
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 3
Number of HSP's successfully gapped in prelim test: 71
Number of HSP's that attempted gapping in prelim test: 6785
Number of HSP's gapped (non-prelim): 149
length of query: 186
length of database: 191,569,459
effective HSP length: 111
effective length of query: 75
effective length of database: 131,672,083
effective search space: 9875406225
effective search space used: 9875406225
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 57 (26.6 bits)