Your job contains 1 sequence.
>psy13230
MLQYTFLIISVSSLSFSRVPESPYKNEMLGLNLLYLLSQNRVAEFHMELERIQYEDMIFL
AKDGVPSPRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQKLHIGSEKQMVEFGKKV
KNIVYFYIFYIN
The BLAST search returned 1 gene product which did not match your query constraints. Please see the full BLAST report below for the details.
BLASTP 2.0MP-WashU [04-May-2006] [linux26-i686-ILP32F64 2006-05-09T11:47:08]
Copyright (C) 1996-2006 Washington University, Saint Louis, Missouri USA.
All Rights Reserved.
Reference: Gish, W. (1996-2006) http://blast.wustl.edu
Query= psy13230
(132 letters)
Database: go_20130330-seqdb.fasta
368,745 sequences; 169,044,731 total letters.
Searching....10....20....30....40....50....60....70....80....90....100% done
Smallest
Sum
High Probability
Sequences producing High-scoring Segment Pairs: Score P(N) N
ZFIN|ZDB-GENE-040625-136 - symbol:psmd8 "proteasome (pros... 151 7.8e-17 2
UNIPROTKB|K7EJC1 - symbol:PSMD8 "26S proteasome non-ATPas... 143 2.0e-16 2
UNIPROTKB|K7EJR3 - symbol:PSMD8 "26S proteasome non-ATPas... 143 7.2e-16 2
RGD|1309842 - symbol:Psmd8 "proteasome (prosome, macropai... 139 4.2e-15 2
UNIPROTKB|Q3SYT7 - symbol:PSMD8 "26S proteasome non-ATPas... 139 4.3e-15 2
UNIPROTKB|F1MYH8 - symbol:PSMD8 "26S proteasome non-ATPas... 137 7.4e-15 2
MGI|MGI:1888669 - symbol:Psmd8 "proteasome (prosome, macr... 139 1.2e-14 2
UNIPROTKB|F1LMQ3 - symbol:Psmd8 "Protein Psmd8" species:1... 139 1.2e-14 2
UNIPROTKB|Q5RE15 - symbol:PSMD8 "26S proteasome non-ATPas... 135 1.3e-14 2
UNIPROTKB|P48556 - symbol:PSMD8 "26S proteasome non-ATPas... 137 1.9e-14 2
UNIPROTKB|E2QY43 - symbol:PSMD8 "Uncharacterized protein"... 137 1.9e-14 2
UNIPROTKB|F1RKI9 - symbol:PSMD8 "Uncharacterized protein"... 137 1.9e-14 2
FB|FBgn0028693 - symbol:Rpn12 "Regulatory particle non-AT... 131 1.1e-11 2
FB|FBgn0036465 - symbol:Rpn12R "Regulatory particle non-A... 112 4.0e-10 2
TAIR|locus:2019504 - symbol:RPN12a "regulatory particle n... 111 4.4e-10 2
DICTYBASE|DDB_G0273979 - symbol:psmD8-2 "26S proteasome r... 101 4.7e-08 2
DICTYBASE|DDB_G0272564 - symbol:psmD8-1 "26S proteasome r... 101 4.7e-08 2
WB|WBGene00004468 - symbol:rpn-12 species:6239 "Caenorhab... 122 2.2e-07 1
CGD|CAL0003893 - symbol:orf19.213 species:5476 "Candida a... 86 6.7e-06 2
UNIPROTKB|Q59SD0 - symbol:RPN12 "Likely 26S proteasome re... 86 6.7e-06 2
TAIR|locus:2165750 - symbol:RPN12b "regulatory particle n... 104 1.9e-05 1
UNIPROTKB|G4N7Y6 - symbol:MGG_03512 "26S proteasome non-A... 100 8.7e-05 1
ASPGD|ASPL0000034023 - symbol:AN3019 species:162425 "Emer... 97 0.00017 1
POMBASE|SPBC16G5.01 - symbol:rpn12 "19S proteasome regula... 90 0.00095 1
>ZFIN|ZDB-GENE-040625-136 [details] [associations]
symbol:psmd8 "proteasome (prosome, macropain) 26S
subunit, non-ATPase, 8" species:7955 "Danio rerio" [GO:0005838
"proteasome regulatory particle" evidence=IEA] [GO:0006508
"proteolysis" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] InterPro:IPR006746 ZFIN:ZDB-GENE-040625-136
GO:GO:0006508 InterPro:IPR019280 Pfam:PF10075 GO:GO:0005838
CTD:5714 eggNOG:NOG285042 HOGENOM:HOG000196008 HOVERGEN:HBG024389
KO:K03031 OrthoDB:EOG4GTKDP PANTHER:PTHR12387
GeneTree:ENSGT00390000014682 OMA:RDEIGAC EMBL:BX908775
EMBL:BX936429 EMBL:BC071432 IPI:IPI00505432 RefSeq:NP_001002131.1
UniGene:Dr.1191 STRING:Q6IQH4 DNASU:415221
Ensembl:ENSDART00000005431 GeneID:415221 KEGG:dre:415221
InParanoid:Q6IQH4 NextBio:20818888 Uniprot:Q6IQH4
Length = 267
Score = 151 (58.2 bits), Expect = 7.8e-17, Sum P(2) = 7.8e-17
Identities = 28/62 (45%), Positives = 40/62 (64%)
Query: 58 IFLAKDGVPSPRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQKLHIGSEKQMVEFG 117
+FLAK +P+ Y F++TL+DT R+EIA CIEKAY I + + L S K+M ++
Sbjct: 161 VFLAKGNIPAESYTFFIDTLLDTIRDEIAGCIEKAYEQIQFNEATRVLFFSSPKKMTDYA 220
Query: 118 KK 119
KK
Sbjct: 221 KK 222
Score = 75 (31.5 bits), Expect = 7.8e-17, Sum P(2) = 7.8e-17
Identities = 14/34 (41%), Positives = 22/34 (64%)
Query: 24 YKNEMXXXXXXXXXSQNRVAEFHMELERIQYEDM 57
Y++++ SQNRV+EFH ELER+ +D+
Sbjct: 104 YRHQLLGLNLLFLLSQNRVSEFHTELERLSAKDI 137
>UNIPROTKB|K7EJC1 [details] [associations]
symbol:PSMD8 "26S proteasome non-ATPase regulatory subunit
8" species:9606 "Homo sapiens" [GO:0005838 "proteasome regulatory
particle" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR006746 InterPro:IPR019280 Pfam:PF10075 EMBL:AC005789
PANTHER:PTHR12387 HGNC:HGNC:9566 Ensembl:ENST00000592035
Uniprot:K7EJC1
Length = 172
Score = 143 (55.4 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 58 IFLAKDGVPSPRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQKLHIGSEKQMVEFG 117
+FLAK +P+ Y F++ L+DT R+EIA CIEKAY I + + L + K+M ++
Sbjct: 77 VFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYA 136
Query: 118 KKVKNI 123
KKV +
Sbjct: 137 KKVAGV 142
Score = 74 (31.1 bits), Expect = 2.0e-16, Sum P(2) = 2.0e-16
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 24 YKNEMXXXXXXXXXSQNRVAEFHMELERIQYEDM 57
Y +++ SQNRVAEFH ELER+ +D+
Sbjct: 20 YMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDI 53
>UNIPROTKB|K7EJR3 [details] [associations]
symbol:PSMD8 "26S proteasome non-ATPase regulatory subunit
8" species:9606 "Homo sapiens" [GO:0005838 "proteasome regulatory
particle" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR006746 Pfam:PF03399 EMBL:AC005789 InterPro:IPR005062
PANTHER:PTHR12387 HGNC:HGNC:9566 Ensembl:ENST00000592561
Uniprot:K7EJR3
Length = 258
Score = 143 (55.4 bits), Expect = 7.2e-16, Sum P(2) = 7.2e-16
Identities = 27/66 (40%), Positives = 41/66 (62%)
Query: 58 IFLAKDGVPSPRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQKLHIGSEKQMVEFG 117
+FLAK +P+ Y F++ L+DT R+EIA CIEKAY I + + L + K+M ++
Sbjct: 188 VFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYA 247
Query: 118 KKVKNI 123
KKV +
Sbjct: 248 KKVAGV 253
Score = 74 (31.1 bits), Expect = 7.2e-16, Sum P(2) = 7.2e-16
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 24 YKNEMXXXXXXXXXSQNRVAEFHMELERIQYEDM 57
Y +++ SQNRVAEFH ELER+ +D+
Sbjct: 131 YMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDI 164
>RGD|1309842 [details] [associations]
symbol:Psmd8 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 8" species:10116 "Rattus norvegicus" [GO:0005634
"nucleus" evidence=ISO] [GO:0005737 "cytoplasm" evidence=ISO]
[GO:0022624 "proteasome accessory complex" evidence=ISO]
[GO:0005730 "nucleolus" evidence=ISO] InterPro:IPR006746
RGD:1309842 GO:GO:0005634 GO:GO:0005737 GO:GO:0006508
InterPro:IPR019280 Pfam:PF10075 GO:GO:0005838 CTD:5714
eggNOG:NOG285042 HOGENOM:HOG000196008 HOVERGEN:HBG024389 KO:K03031
OrthoDB:EOG4GTKDP PANTHER:PTHR12387 IPI:IPI00364072
RefSeq:NP_001094301.1 UniGene:Rn.137673 GeneID:292766
KEGG:rno:292766 NextBio:634736 EMBL:BC105894 IntAct:Q3B8P5
STRING:Q3B8P5 UCSC:RGD:1309842 InParanoid:Q3B8P5
ArrayExpress:Q3B8P5 Genevestigator:Q3B8P5 Uniprot:Q3B8P5
Length = 285
Score = 139 (54.0 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 58 IFLAKDGVPSPRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQKLHIGSEKQMVEFG 117
+FLAK +P+ Y F++ L+DT R+EIA CIEKAY I + + L + K+M ++
Sbjct: 179 VFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFAEATRILFFSTPKKMTDYA 238
Query: 118 KK 119
KK
Sbjct: 239 KK 240
Score = 74 (31.1 bits), Expect = 4.2e-15, Sum P(2) = 4.2e-15
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 24 YKNEMXXXXXXXXXSQNRVAEFHMELERIQYEDM 57
Y +++ SQNRVAEFH ELER+ +D+
Sbjct: 122 YMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDI 155
>UNIPROTKB|Q3SYT7 [details] [associations]
symbol:PSMD8 "26S proteasome non-ATPase regulatory subunit
8" species:9913 "Bos taurus" [GO:0022624 "proteasome accessory
complex" evidence=ISS] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005838 "proteasome regulatory particle" evidence=IEA]
InterPro:IPR006746 Pfam:PF03399 GO:GO:0006508 InterPro:IPR019280
Pfam:PF10075 InterPro:IPR005062 GO:GO:0022624 GO:GO:0005838
EMBL:BC103400 IPI:IPI00912143 RefSeq:NP_001030283.1
UniGene:Bt.17968 STRING:Q3SYT7 PRIDE:Q3SYT7 GeneID:512891
KEGG:bta:512891 CTD:5714 eggNOG:NOG285042 HOGENOM:HOG000196008
HOVERGEN:HBG024389 InParanoid:Q3SYT7 KO:K03031 OrthoDB:EOG4GTKDP
NextBio:20870602 PANTHER:PTHR12387 Uniprot:Q3SYT7
Length = 287
Score = 139 (54.0 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
Identities = 30/75 (40%), Positives = 44/75 (58%)
Query: 58 IFLAKDGVPSPRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQKLHIGSEKQMVEFG 117
+FLAK +P+ Y F++ L+DT R+EIA CIEKAY I + + L + K+M ++
Sbjct: 181 VFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYA 240
Query: 118 KK---VKNIVYFYIF 129
KK V I +Y F
Sbjct: 241 KKRGWVLGINNYYSF 255
Score = 74 (31.1 bits), Expect = 4.3e-15, Sum P(2) = 4.3e-15
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 24 YKNEMXXXXXXXXXSQNRVAEFHMELERIQYEDM 57
Y +++ SQNRVAEFH ELER+ +D+
Sbjct: 124 YMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDI 157
>UNIPROTKB|F1MYH8 [details] [associations]
symbol:PSMD8 "26S proteasome non-ATPase regulatory subunit
8" species:9913 "Bos taurus" [GO:0005737 "cytoplasm" evidence=IEA]
[GO:0005634 "nucleus" evidence=IEA] [GO:0006508 "proteolysis"
evidence=IEA] [GO:0005838 "proteasome regulatory particle"
evidence=IEA] InterPro:IPR006746 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 InterPro:IPR019280 Pfam:PF10075 GO:GO:0005838
UniGene:Bt.17968 KO:K03031 PANTHER:PTHR12387
GeneTree:ENSGT00390000014682 OMA:RDEIGAC EMBL:DAAA02047024
IPI:IPI00712865 RefSeq:XP_001790254.1 UniGene:Bt.91216
Ensembl:ENSBTAT00000044859 GeneID:785653 KEGG:bta:785653
NextBio:20927416 Uniprot:F1MYH8
Length = 287
Score = 137 (53.3 bits), Expect = 7.4e-15, Sum P(2) = 7.4e-15
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 58 IFLAKDGVPSPRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQKLHIGSEKQMVEFG 117
+FLAK +P+ Y F++ L+DT R+EIA CIEKAY I + + L + K+M ++
Sbjct: 181 VFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYA 240
Query: 118 KK 119
KK
Sbjct: 241 KK 242
Score = 74 (31.1 bits), Expect = 7.4e-15, Sum P(2) = 7.4e-15
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 24 YKNEMXXXXXXXXXSQNRVAEFHMELERIQYEDM 57
Y +++ SQNRVAEFH ELER+ +D+
Sbjct: 124 YMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDI 157
>MGI|MGI:1888669 [details] [associations]
symbol:Psmd8 "proteasome (prosome, macropain) 26S subunit,
non-ATPase, 8" species:10090 "Mus musculus" [GO:0000502 "proteasome
complex" evidence=IEA] [GO:0003674 "molecular_function"
evidence=ND] [GO:0005838 "proteasome regulatory particle"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0022624
"proteasome accessory complex" evidence=IDA] InterPro:IPR006746
MGI:MGI:1888669 GO:GO:0005634 GO:GO:0005737 GO:GO:0006508
InterPro:IPR019280 Pfam:PF10075 EMBL:AC164564 GO:GO:0022624
GO:GO:0005838 CTD:5714 eggNOG:NOG285042 HOGENOM:HOG000196008
HOVERGEN:HBG024389 KO:K03031 OrthoDB:EOG4GTKDP PANTHER:PTHR12387
GeneTree:ENSGT00390000014682 OMA:RDEIGAC EMBL:AK020132
IPI:IPI00403509 RefSeq:NP_080821.3 UniGene:Mm.273152
ProteinModelPortal:Q9CX56 IntAct:Q9CX56 STRING:Q9CX56
PhosphoSite:Q9CX56 PaxDb:Q9CX56 PRIDE:Q9CX56 DNASU:57296
Ensembl:ENSMUST00000059642 GeneID:57296 KEGG:mmu:57296
UCSC:uc009gbb.2 InParanoid:Q9CX56 NextBio:313655 Bgee:Q9CX56
Genevestigator:Q9CX56 GermOnline:ENSMUSG00000030591 Uniprot:Q9CX56
Length = 353
Score = 139 (54.0 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 58 IFLAKDGVPSPRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQKLHIGSEKQMVEFG 117
+FLAK +P+ Y F++ L+DT R+EIA CIEKAY I + + L + K+M ++
Sbjct: 247 VFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFAEATRILFFSTPKKMTDYA 306
Query: 118 KK 119
KK
Sbjct: 307 KK 308
Score = 74 (31.1 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 24 YKNEMXXXXXXXXXSQNRVAEFHMELERIQYEDM 57
Y +++ SQNRVAEFH ELER+ +D+
Sbjct: 190 YMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDI 223
>UNIPROTKB|F1LMQ3 [details] [associations]
symbol:Psmd8 "Protein Psmd8" species:10116 "Rattus
norvegicus" [GO:0005634 "nucleus" evidence=IEA] [GO:0005737
"cytoplasm" evidence=IEA] [GO:0005838 "proteasome regulatory
particle" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
InterPro:IPR006746 RGD:1309842 GO:GO:0005634 GO:GO:0005737
GO:GO:0006508 InterPro:IPR019280 Pfam:PF10075 GO:GO:0005838
CTD:5714 KO:K03031 PANTHER:PTHR12387 GeneTree:ENSGT00390000014682
OMA:TEDQDAF IPI:IPI00364072 RefSeq:NP_001094301.1 UniGene:Rn.137673
PRIDE:F1LMQ3 Ensembl:ENSRNOT00000027937 GeneID:292766
KEGG:rno:292766 NextBio:634736 ArrayExpress:F1LMQ3 Uniprot:F1LMQ3
Length = 353
Score = 139 (54.0 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 58 IFLAKDGVPSPRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQKLHIGSEKQMVEFG 117
+FLAK +P+ Y F++ L+DT R+EIA CIEKAY I + + L + K+M ++
Sbjct: 247 VFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFAEATRILFFSTPKKMTDYA 306
Query: 118 KK 119
KK
Sbjct: 307 KK 308
Score = 74 (31.1 bits), Expect = 1.2e-14, Sum P(2) = 1.2e-14
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 24 YKNEMXXXXXXXXXSQNRVAEFHMELERIQYEDM 57
Y +++ SQNRVAEFH ELER+ +D+
Sbjct: 190 YMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDI 223
>UNIPROTKB|Q5RE15 [details] [associations]
symbol:PSMD8 "26S proteasome non-ATPase regulatory subunit
8" species:9601 "Pongo abelii" [GO:0022624 "proteasome accessory
complex" evidence=ISS] InterPro:IPR006746 GO:GO:0006508
InterPro:IPR019280 Pfam:PF10075 GO:GO:0022624 GO:GO:0005838
HOVERGEN:HBG024389 PANTHER:PTHR12387 EMBL:CR857724
UniGene:Pab.14307 PRIDE:Q5RE15 InParanoid:Q5RE15 Uniprot:Q5RE15
Length = 289
Score = 135 (52.6 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 58 IFLAKDGVPSPRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQKLHIGSEKQMVEFG 117
+FLAK +P+ Y F++ L+DT R+EIA CIEKAY I + + L + K+M ++
Sbjct: 183 VFLAKGNIPAESYAFFIDILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYA 242
Query: 118 KK 119
KK
Sbjct: 243 KK 244
Score = 74 (31.1 bits), Expect = 1.3e-14, Sum P(2) = 1.3e-14
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 24 YKNEMXXXXXXXXXSQNRVAEFHMELERIQYEDM 57
Y +++ SQNRVAEFH ELER+ +D+
Sbjct: 126 YMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDI 159
>UNIPROTKB|P48556 [details] [associations]
symbol:PSMD8 "26S proteasome non-ATPase regulatory subunit
8" species:9606 "Homo sapiens" [GO:0005838 "proteasome regulatory
particle" evidence=IEA] [GO:0022624 "proteasome accessory complex"
evidence=ISS] [GO:0000502 "proteasome complex" evidence=TAS]
[GO:0000075 "cell cycle checkpoint" evidence=TAS] [GO:0000082 "G1/S
transition of mitotic cell cycle" evidence=TAS] [GO:0000084 "S
phase of mitotic cell cycle" evidence=TAS] [GO:0000209 "protein
polyubiquitination" evidence=TAS] [GO:0000216 "M/G1 transition of
mitotic cell cycle" evidence=TAS] [GO:0000278 "mitotic cell cycle"
evidence=TAS] [GO:0002474 "antigen processing and presentation of
peptide antigen via MHC class I" evidence=TAS] [GO:0002479 "antigen
processing and presentation of exogenous peptide antigen via MHC
class I, TAP-dependent" evidence=TAS] [GO:0005654 "nucleoplasm"
evidence=TAS] [GO:0005829 "cytosol" evidence=TAS] [GO:0006521
"regulation of cellular amino acid metabolic process" evidence=TAS]
[GO:0006915 "apoptotic process" evidence=TAS] [GO:0006977 "DNA
damage response, signal transduction by p53 class mediator
resulting in cell cycle arrest" evidence=TAS] [GO:0010467 "gene
expression" evidence=TAS] [GO:0016032 "viral reproduction"
evidence=TAS] [GO:0016070 "RNA metabolic process" evidence=TAS]
[GO:0016071 "mRNA metabolic process" evidence=TAS] [GO:0031145
"anaphase-promoting complex-dependent proteasomal
ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0034641 "cellular nitrogen compound metabolic process"
evidence=TAS] [GO:0042590 "antigen processing and presentation of
exogenous peptide antigen via MHC class I" evidence=TAS]
[GO:0042981 "regulation of apoptotic process" evidence=TAS]
[GO:0044281 "small molecule metabolic process" evidence=TAS]
[GO:0051436 "negative regulation of ubiquitin-protein ligase
activity involved in mitotic cell cycle" evidence=TAS] [GO:0051437
"positive regulation of ubiquitin-protein ligase activity involved
in mitotic cell cycle" evidence=TAS] [GO:0051439 "regulation of
ubiquitin-protein ligase activity involved in mitotic cell cycle"
evidence=TAS] [GO:0005634 "nucleus" evidence=IDA] [GO:0005730
"nucleolus" evidence=IDA] [GO:0005737 "cytoplasm" evidence=IDA]
Reactome:REACT_13505 Reactome:REACT_578 Reactome:REACT_71
Reactome:REACT_21257 Reactome:REACT_6850 Reactome:REACT_111217
InterPro:IPR006746 GO:GO:0005829 Reactome:REACT_111102
Reactome:REACT_116125 Reactome:REACT_6900 GO:GO:0006915
GO:GO:0010467 GO:GO:0016071 Reactome:REACT_115566 GO:GO:0005654
GO:GO:0002479 GO:GO:0016032 Reactome:REACT_21300 GO:GO:0006977
GO:GO:0042981 GO:GO:0044281 GO:GO:0000082 EMBL:CH471126
GO:GO:0051436 GO:GO:0000216 GO:GO:0000209 GO:GO:0000084
GO:GO:0031145 GO:GO:0051437 GO:GO:0006521 Reactome:REACT_383
InterPro:IPR019280 Pfam:PF10075 EMBL:AC005789 GO:GO:0005838
CTD:5714 eggNOG:NOG285042 HOGENOM:HOG000196008 HOVERGEN:HBG024389
KO:K03031 OrthoDB:EOG4GTKDP PANTHER:PTHR12387 EMBL:AK301771
EMBL:BC001164 EMBL:BC065006 EMBL:D38047 IPI:IPI00937278 PIR:S56108
RefSeq:NP_002803.2 UniGene:Hs.78466 ProteinModelPortal:P48556
IntAct:P48556 MINT:MINT-1136185 STRING:P48556 PhosphoSite:P48556
DMDM:308153477 PaxDb:P48556 PRIDE:P48556 DNASU:5714
Ensembl:ENST00000215071 GeneID:5714 KEGG:hsa:5714 UCSC:uc002oii.4
GeneCards:GC19P038865 H-InvDB:HIX0040074 HGNC:HGNC:9566
HPA:CAB021101 HPA:HPA006702 neXtProt:NX_P48556 PharmGKB:PA33912
InParanoid:P48556 OMA:RDEIGAC ChiTaRS:PSMD8 GenomeRNAi:5714
NextBio:22198 Bgee:P48556 CleanEx:HS_PSMD8 Genevestigator:P48556
GermOnline:ENSG00000099341 Uniprot:P48556
Length = 350
Score = 137 (53.3 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 58 IFLAKDGVPSPRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQKLHIGSEKQMVEFG 117
+FLAK +P+ Y F++ L+DT R+EIA CIEKAY I + + L + K+M ++
Sbjct: 244 VFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYA 303
Query: 118 KK 119
KK
Sbjct: 304 KK 305
Score = 74 (31.1 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 24 YKNEMXXXXXXXXXSQNRVAEFHMELERIQYEDM 57
Y +++ SQNRVAEFH ELER+ +D+
Sbjct: 187 YMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDI 220
>UNIPROTKB|E2QY43 [details] [associations]
symbol:PSMD8 "Uncharacterized protein" species:9615 "Canis
lupus familiaris" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634
"nucleus" evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA]
[GO:0005838 "proteasome regulatory particle" evidence=IEA]
InterPro:IPR006746 GO:GO:0005634 GO:GO:0005737 GO:GO:0006508
InterPro:IPR019280 Pfam:PF10075 GO:GO:0005838 CTD:5714 KO:K03031
PANTHER:PTHR12387 GeneTree:ENSGT00390000014682 OMA:RDEIGAC
EMBL:AAEX03000975 RefSeq:XP_533681.1 Ensembl:ENSCAFT00000009584
GeneID:476470 KEGG:cfa:476470 Uniprot:E2QY43
Length = 351
Score = 137 (53.3 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 58 IFLAKDGVPSPRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQKLHIGSEKQMVEFG 117
+FLAK +P+ Y F++ L+DT R+EIA CIEKAY I + + L + K+M ++
Sbjct: 245 VFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYA 304
Query: 118 KK 119
KK
Sbjct: 305 KK 306
Score = 74 (31.1 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 24 YKNEMXXXXXXXXXSQNRVAEFHMELERIQYEDM 57
Y +++ SQNRVAEFH ELER+ +D+
Sbjct: 188 YMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDI 221
>UNIPROTKB|F1RKI9 [details] [associations]
symbol:PSMD8 "Uncharacterized protein" species:9823 "Sus
scrofa" [GO:0005737 "cytoplasm" evidence=IEA] [GO:0005634 "nucleus"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0005838
"proteasome regulatory particle" evidence=IEA] InterPro:IPR006746
GO:GO:0005634 GO:GO:0005737 GO:GO:0006508 InterPro:IPR019280
Pfam:PF10075 GO:GO:0005838 KO:K03031 PANTHER:PTHR12387
GeneTree:ENSGT00390000014682 OMA:RDEIGAC EMBL:FP236590
RefSeq:XP_003127158.1 Ensembl:ENSSSCT00000003279 GeneID:100515483
KEGG:ssc:100515483 Uniprot:F1RKI9
Length = 351
Score = 137 (53.3 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 26/62 (41%), Positives = 39/62 (62%)
Query: 58 IFLAKDGVPSPRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQKLHIGSEKQMVEFG 117
+FLAK +P+ Y F++ L+DT R+EIA CIEKAY I + + L + K+M ++
Sbjct: 245 VFLAKGNIPAESYTFFIDILLDTIRDEIAGCIEKAYEKILFTEATRILFFNTPKKMTDYA 304
Query: 118 KK 119
KK
Sbjct: 305 KK 306
Score = 74 (31.1 bits), Expect = 1.9e-14, Sum P(2) = 1.9e-14
Identities = 15/34 (44%), Positives = 21/34 (61%)
Query: 24 YKNEMXXXXXXXXXSQNRVAEFHMELERIQYEDM 57
Y +++ SQNRVAEFH ELER+ +D+
Sbjct: 188 YMHQLLGLNLLFLLSQNRVAEFHTELERLPAKDI 221
>FB|FBgn0028693 [details] [associations]
symbol:Rpn12 "Regulatory particle non-ATPase 12" species:7227
"Drosophila melanogaster" [GO:0008541 "proteasome regulatory
particle, lid subcomplex" evidence=ISS;NAS] [GO:0004175
"endopeptidase activity" evidence=IDA] [GO:0006508 "proteolysis"
evidence=ISS;IDA] [GO:0005838 "proteasome regulatory particle"
evidence=ISS;IDA] [GO:0009987 "cellular process" evidence=IMP]
[GO:0008283 "cell proliferation" evidence=IMP] [GO:0007052 "mitotic
spindle organization" evidence=IMP] [GO:0000022 "mitotic spindle
elongation" evidence=IMP] [GO:0022008 "neurogenesis" evidence=IMP]
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=ISS] InterPro:IPR006746 EMBL:AE014296 GO:GO:0022008
GO:GO:0008283 GO:GO:0006508 GO:GO:0004175 GO:GO:0008541
GO:GO:0000022 InterPro:IPR019280 Pfam:PF10075 eggNOG:NOG285042
KO:K03031 PANTHER:PTHR12387 GeneTree:ENSGT00390000014682
OMA:RDEIGAC EMBL:AF145314 EMBL:AY084160 RefSeq:NP_648904.1
UniGene:Dm.981 IntAct:Q9V436 MINT:MINT-867414 STRING:Q9V436
EnsemblMetazoa:FBtr0075308 GeneID:39845 KEGG:dme:Dmel_CG4157
UCSC:CG4157-RA CTD:39845 FlyBase:FBgn0028693 InParanoid:Q9V436
OrthoDB:EOG48933B GenomeRNAi:39845 NextBio:815690 Uniprot:Q9V436
Length = 264
Score = 131 (51.2 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 27/62 (43%), Positives = 40/62 (64%)
Query: 58 IFLAKDGVPSPRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQKLHIGSEKQMVEFG 117
IF AK VP Y+ FM+ L++T R+EI +CIEK+Y IS D A++L++ ++ FG
Sbjct: 159 IFQAKSTVPVEVYSYFMDLLLETVRDEIGACIEKSYDKISAKDAAKRLNLRVPDEIKAFG 218
Query: 118 KK 119
K
Sbjct: 219 AK 220
Score = 48 (22.0 bits), Expect = 1.1e-11, Sum P(2) = 1.1e-11
Identities = 9/18 (50%), Positives = 13/18 (72%)
Query: 38 SQNRVAEFHMELERIQYE 55
S NRV++FH ELE + +
Sbjct: 116 SGNRVSDFHTELELLSVD 133
>FB|FBgn0036465 [details] [associations]
symbol:Rpn12R "Regulatory particle non-ATPase 12-related"
species:7227 "Drosophila melanogaster" [GO:0006508 "proteolysis"
evidence=ISS] [GO:0005838 "proteasome regulatory particle"
evidence=ISS] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=ISS] InterPro:IPR006746 Pfam:PF03399
EMBL:AE014296 GO:GO:0006508 InterPro:IPR019280 Pfam:PF10075
InterPro:IPR005062 GO:GO:0005838 eggNOG:NOG285042 KO:K03031
PANTHER:PTHR12387 GeneTree:ENSGT00390000014682 EMBL:AY075229
EMBL:BK002145 RefSeq:NP_996086.1 UniGene:Dm.33494 STRING:Q9VUJ4
EnsemblMetazoa:FBtr0075669 GeneID:2768973 KEGG:dme:Dmel_CG11552
UCSC:CG11552-RA CTD:2768973 FlyBase:FBgn0036465 InParanoid:Q9VUJ4
OMA:EEIASCM OrthoDB:EOG489338 GenomeRNAi:2768973 NextBio:848890
Uniprot:Q9VUJ4
Length = 262
Score = 112 (44.5 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 27/64 (42%), Positives = 40/64 (62%)
Query: 58 IFLAKDGVPSPRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQKLHI--GSEKQMVE 115
I AK +PS Y+ FM+ L++T R EIASC+EK+Y ++ AQ+L + GS K++ E
Sbjct: 156 ILQAKKSMPSEIYSNFMDILVNTAREEIASCMEKSYLKMAPKLAAQRLGLRPGS-KELFE 214
Query: 116 FGKK 119
K
Sbjct: 215 LATK 218
Score = 54 (24.1 bits), Expect = 4.0e-10, Sum P(2) = 4.0e-10
Identities = 9/13 (69%), Positives = 13/13 (100%)
Query: 40 NRVAEFHMELERI 52
NR+A+FH+ELER+
Sbjct: 115 NRLADFHIELERL 127
>TAIR|locus:2019504 [details] [associations]
symbol:RPN12a "regulatory particle non-ATPase 12A"
species:3702 "Arabidopsis thaliana" [GO:0005634 "nucleus"
evidence=ISM;TAS] [GO:0005838 "proteasome regulatory particle"
evidence=IEA] [GO:0006508 "proteolysis" evidence=IEA] [GO:0008233
"peptidase activity" evidence=ISS] [GO:0008541 "proteasome
regulatory particle, lid subcomplex" evidence=ISS] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=TAS]
[GO:0030163 "protein catabolic process" evidence=TAS] [GO:0000502
"proteasome complex" evidence=IDA] [GO:0009647 "skotomorphogenesis"
evidence=IMP] [GO:0009733 "response to auxin stimulus"
evidence=IMP] [GO:0009735 "response to cytokinin stimulus"
evidence=IEP;RCA;IMP] [GO:0009908 "flower development"
evidence=IMP] [GO:0031540 "regulation of anthocyanin biosynthetic
process" evidence=IMP] [GO:0048366 "leaf development" evidence=IMP]
[GO:0048528 "post-embryonic root development" evidence=IMP]
[GO:0048825 "cotyledon development" evidence=IMP] [GO:0009941
"chloroplast envelope" evidence=IDA] [GO:0009408 "response to heat"
evidence=IMP] [GO:0043161 "proteasomal ubiquitin-dependent protein
catabolic process" evidence=RCA;IMP] [GO:0043248 "proteasome
assembly" evidence=RCA;IMP] [GO:0051788 "response to misfolded
protein" evidence=RCA;IMP] [GO:0005829 "cytosol" evidence=IDA]
[GO:0006635 "fatty acid beta-oxidation" evidence=RCA] [GO:0009407
"toxin catabolic process" evidence=RCA] [GO:0042023 "DNA
endoreduplication" evidence=RCA] [GO:0048767 "root hair elongation"
evidence=RCA] [GO:0051510 "regulation of unidimensional cell
growth" evidence=RCA] [GO:0051604 "protein maturation"
evidence=RCA] [GO:0080129 "proteasome core complex assembly"
evidence=RCA] InterPro:IPR006746 Pfam:PF03399 EMBL:CP002684
GenomeReviews:CT485782_GR GO:GO:0005829 GO:GO:0005634 GO:GO:0009735
GO:GO:0009733 GO:GO:0043161 GO:GO:0009941 EMBL:AC009519
GO:GO:0009408 GO:GO:0009736 GO:GO:0000502 GO:GO:0043248
GO:GO:0009908 GO:GO:0048366 GO:GO:0031540 GO:GO:0048825
GO:GO:0009647 GO:GO:0051788 InterPro:IPR005062 GO:GO:0048528
GO:GO:0005838 eggNOG:NOG285042 HOGENOM:HOG000196008 KO:K03031
PANTHER:PTHR12387 EMBL:AY230846 EMBL:AY230847 EMBL:AF410265
EMBL:AY039857 EMBL:AY143888 IPI:IPI00536776 PIR:H96668
RefSeq:NP_176633.1 UniGene:At.24612 ProteinModelPortal:Q9SGW3
IntAct:Q9SGW3 STRING:Q9SGW3 PaxDb:Q9SGW3 PRIDE:Q9SGW3 DNASU:842760
EnsemblPlants:AT1G64520.1 GeneID:842760 KEGG:ath:AT1G64520
TAIR:At1g64520 InParanoid:Q9SGW3 OMA:TEDQDAF PhylomeDB:Q9SGW3
ProtClustDB:CLSN2679310 Genevestigator:Q9SGW3 Uniprot:Q9SGW3
Length = 267
Score = 111 (44.1 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 47 MELERIQYE---DMIFLAKDGVPSPRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQ 103
+ELE+ E + + A+ P Y FM+ L T R+EIA C EKAY +S+ D Q
Sbjct: 146 VELEQSFMEGAYNRVLSARQTAPDATYVYFMDLLAKTIRDEIAGCSEKAYDYVSISDARQ 205
Query: 104 KLHIGSEKQMVEF 116
L S+++++ +
Sbjct: 206 MLLFSSDQELLTY 218
Score = 55 (24.4 bits), Expect = 4.4e-10, Sum P(2) = 4.4e-10
Identities = 10/12 (83%), Positives = 11/12 (91%)
Query: 39 QNRVAEFHMELE 50
QNR+AEFH ELE
Sbjct: 119 QNRIAEFHTELE 130
>DICTYBASE|DDB_G0273979 [details] [associations]
symbol:psmD8-2 "26S proteasome regulatory subunit
S14" species:44689 "Dictyostelium discoideum" [GO:0006508
"proteolysis" evidence=IEA] [GO:0005838 "proteasome regulatory
particle" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR006746
dictyBase:DDB_G0273979 dictyBase:DDB_G0272564 Pfam:PF03399
GO:GO:0007275 GO:GO:0006508 GenomeReviews:CM000151_GR
EMBL:AAFI02000011 EMBL:AAFI02000009 GO:GO:0004175
InterPro:IPR005062 GO:GO:0005838 eggNOG:NOG285042 KO:K03031
PANTHER:PTHR12387 OMA:SENKHLM EMBL:V00194 EMBL:M11429 PIR:A03384
RefSeq:XP_644348.1 RefSeq:XP_645066.1 STRING:P02889 PRIDE:P02889
EnsemblProtists:DDB0185109 EnsemblProtists:DDB0266350
GeneID:8618741 GeneID:8619235 KEGG:ddi:DDB_G0272564
KEGG:ddi:DDB_G0273979 ProtClustDB:CLSZ2431065 Uniprot:P02889
Length = 263
Score = 101 (40.6 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 58 IFLAKDGVPSPRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQKLHIGSEKQMVEFG 117
I ++ GVPS Y F++ L D+ + +IA+C EK++ +S+ D + L Q ++
Sbjct: 160 IIQSRSGVPSEYYQVFLDILADSIKEDIANCSEKSFKTLSLKDAEKVLLFNDNNQFQQYI 219
Query: 118 KK 119
K+
Sbjct: 220 KE 221
Score = 46 (21.3 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 6/20 (30%), Positives = 16/20 (80%)
Query: 38 SQNRVAEFHMELERIQYEDM 57
++++ +EFH E+E I++ ++
Sbjct: 118 AKHKTSEFHSEIELIEFNNL 137
>DICTYBASE|DDB_G0272564 [details] [associations]
symbol:psmD8-1 "26S proteasome regulatory subunit
S14" species:44689 "Dictyostelium discoideum" [GO:0006508
"proteolysis" evidence=IEA] [GO:0005838 "proteasome regulatory
particle" evidence=IEA] [GO:0004175 "endopeptidase activity"
evidence=ISS] [GO:0007275 "multicellular organismal development"
evidence=IEA] [GO:0000502 "proteasome complex" evidence=IEA]
[GO:0044351 "macropinocytosis" evidence=RCA] InterPro:IPR006746
dictyBase:DDB_G0273979 dictyBase:DDB_G0272564 Pfam:PF03399
GO:GO:0007275 GO:GO:0006508 GenomeReviews:CM000151_GR
EMBL:AAFI02000011 EMBL:AAFI02000009 GO:GO:0004175
InterPro:IPR005062 GO:GO:0005838 eggNOG:NOG285042 KO:K03031
PANTHER:PTHR12387 OMA:SENKHLM EMBL:V00194 EMBL:M11429 PIR:A03384
RefSeq:XP_644348.1 RefSeq:XP_645066.1 STRING:P02889 PRIDE:P02889
EnsemblProtists:DDB0185109 EnsemblProtists:DDB0266350
GeneID:8618741 GeneID:8619235 KEGG:ddi:DDB_G0272564
KEGG:ddi:DDB_G0273979 ProtClustDB:CLSZ2431065 Uniprot:P02889
Length = 263
Score = 101 (40.6 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 19/62 (30%), Positives = 35/62 (56%)
Query: 58 IFLAKDGVPSPRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQKLHIGSEKQMVEFG 117
I ++ GVPS Y F++ L D+ + +IA+C EK++ +S+ D + L Q ++
Sbjct: 160 IIQSRSGVPSEYYQVFLDILADSIKEDIANCSEKSFKTLSLKDAEKVLLFNDNNQFQQYI 219
Query: 118 KK 119
K+
Sbjct: 220 KE 221
Score = 46 (21.3 bits), Expect = 4.7e-08, Sum P(2) = 4.7e-08
Identities = 6/20 (30%), Positives = 16/20 (80%)
Query: 38 SQNRVAEFHMELERIQYEDM 57
++++ +EFH E+E I++ ++
Sbjct: 118 AKHKTSEFHSEIELIEFNNL 137
>WB|WBGene00004468 [details] [associations]
symbol:rpn-12 species:6239 "Caenorhabditis elegans"
[GO:0005838 "proteasome regulatory particle" evidence=IEA;ISS]
[GO:0006508 "proteolysis" evidence=IEA] [GO:0008340 "determination
of adult lifespan" evidence=IMP] [GO:0040027 "negative regulation
of vulval development" evidence=IMP] [GO:0016246 "RNA interference"
evidence=IMP] [GO:0005515 "protein binding" evidence=IPI]
InterPro:IPR006746 GO:GO:0008340 GO:GO:0016246 GO:GO:0006508
GO:GO:0040027 InterPro:IPR019280 Pfam:PF10075 EMBL:Z69904
GO:GO:0005838 eggNOG:NOG285042 HOGENOM:HOG000196008 KO:K03031
PANTHER:PTHR12387 PIR:T27772 RefSeq:NP_496489.1
ProteinModelPortal:Q23449 IntAct:Q23449 MINT:MINT-210917
STRING:Q23449 World-2DPAGE:0020:Q23449 PaxDb:Q23449
EnsemblMetazoa:ZK20.5.1 EnsemblMetazoa:ZK20.5.2 GeneID:174786
KEGG:cel:CELE_ZK20.5 UCSC:ZK20.5.1 CTD:174786 WormBase:ZK20.5
GeneTree:ENSGT00390000014682 InParanoid:Q23449 OMA:SENKHLM
NextBio:885500 Uniprot:Q23449
Length = 250
Score = 122 (48.0 bits), Expect = 2.2e-07, P = 2.2e-07
Identities = 23/64 (35%), Positives = 40/64 (62%)
Query: 58 IFLAKDGVPSPRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQKLHIGSEKQMVEFG 117
+ L + +PSP Y F+ ++DT R EIA+ IEK++ V++ D L +++QM +FG
Sbjct: 145 VVLTEKNIPSPFYTIFIRIMLDTIRREIATSIEKSFKVLTAKDATVMLLFDNDEQMKKFG 204
Query: 118 KKVK 121
++ K
Sbjct: 205 QERK 208
>CGD|CAL0003893 [details] [associations]
symbol:orf19.213 species:5476 "Candida albicans" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IEA] [GO:0008541 "proteasome regulatory particle, lid
subcomplex" evidence=IEA] [GO:0034515 "proteasome storage granule"
evidence=IEA] [GO:0006511 "ubiquitin-dependent protein catabolic
process" evidence=IEA] InterPro:IPR006746 CGD:CAL0003893
Pfam:PF03399 GO:GO:0006508 InterPro:IPR005062 GO:GO:0005838
eggNOG:NOG285042 HOGENOM:HOG000196008 KO:K03031 PANTHER:PTHR12387
EMBL:AACQ01000153 EMBL:AACQ01000152 RefSeq:XP_712570.1
RefSeq:XP_712597.1 STRING:Q59SD0 GeneID:3645795 GeneID:3645826
KEGG:cal:CaO19.213 KEGG:cal:CaO19.7845 Uniprot:Q59SD0
Length = 277
Score = 86 (35.3 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 65 VPSPRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQKLHIGSEKQMVEFGKKVK 121
+P Y F++TLI+ R EIA +EK Y I + + L++ E F K +K
Sbjct: 175 LPCQEYTHFVDTLINALRFEIAKSLEKTYDSIPISNCKNLLYLPQELSDANFEKTLK 231
Score = 42 (19.8 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 38 SQNRVAEFHMELERI 52
SQ +++FH+ELE I
Sbjct: 119 SQGLISKFHVELEVI 133
>UNIPROTKB|Q59SD0 [details] [associations]
symbol:RPN12 "Likely 26S proteasome regulatory particle
subunit Rpn12p" species:237561 "Candida albicans SC5314"
[GO:0003674 "molecular_function" evidence=ND] InterPro:IPR006746
CGD:CAL0003893 Pfam:PF03399 GO:GO:0006508 InterPro:IPR005062
GO:GO:0005838 eggNOG:NOG285042 HOGENOM:HOG000196008 KO:K03031
PANTHER:PTHR12387 EMBL:AACQ01000153 EMBL:AACQ01000152
RefSeq:XP_712570.1 RefSeq:XP_712597.1 STRING:Q59SD0 GeneID:3645795
GeneID:3645826 KEGG:cal:CaO19.213 KEGG:cal:CaO19.7845
Uniprot:Q59SD0
Length = 277
Score = 86 (35.3 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 19/57 (33%), Positives = 29/57 (50%)
Query: 65 VPSPRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQKLHIGSEKQMVEFGKKVK 121
+P Y F++TLI+ R EIA +EK Y I + + L++ E F K +K
Sbjct: 175 LPCQEYTHFVDTLINALRFEIAKSLEKTYDSIPISNCKNLLYLPQELSDANFEKTLK 231
Score = 42 (19.8 bits), Expect = 6.7e-06, Sum P(2) = 6.7e-06
Identities = 8/15 (53%), Positives = 12/15 (80%)
Query: 38 SQNRVAEFHMELERI 52
SQ +++FH+ELE I
Sbjct: 119 SQGLISKFHVELEVI 133
>TAIR|locus:2165750 [details] [associations]
symbol:RPN12b "regulatory particle non-ATPase 12B"
species:3702 "Arabidopsis thaliana" [GO:0005838 "proteasome
regulatory particle" evidence=IEA;ISS] [GO:0006508 "proteolysis"
evidence=IEA;ISS] [GO:0008233 "peptidase activity" evidence=ISS]
InterPro:IPR006746 EMBL:CP002688 GenomeReviews:BA000015_GR
GO:GO:0006508 EMBL:AB017067 InterPro:IPR019280 Pfam:PF10075
GO:GO:0005838 eggNOG:NOG285042 HOGENOM:HOG000196008 KO:K03031
PANTHER:PTHR12387 ProtClustDB:CLSN2679310 EMBL:AY258413
IPI:IPI00517114 RefSeq:NP_199019.2 UniGene:At.50500
ProteinModelPortal:Q9FHY0 EnsemblPlants:AT5G42040.1 GeneID:834209
KEGG:ath:AT5G42040 TAIR:At5g42040 InParanoid:Q9FHY0 OMA:ANESAPC
Genevestigator:Q9FHY0 Uniprot:Q9FHY0
Length = 233
Score = 104 (41.7 bits), Expect = 1.9e-05, P = 1.9e-05
Identities = 25/81 (30%), Positives = 43/81 (53%)
Query: 39 QNRVAEFHMELERIQYE---DMIFLAKDGVPSPRYNAFMETLIDTTRNEIASCIEKAYTV 95
+N + +ELE+ E + + A+ P Y FM+ L T R+EIA C EKAY
Sbjct: 104 ENPCIKHAVELEQSFMEGAYNRVLSARQTAPDETYVYFMDLLAKTIRDEIAGCSEKAYDH 163
Query: 96 ISVGDTAQKLHIGSEKQMVEF 116
+S+ + + L S++Q++ +
Sbjct: 164 LSISEGCKMLLFSSDQQLLTY 184
>UNIPROTKB|G4N7Y6 [details] [associations]
symbol:MGG_03512 "26S proteasome non-ATPase regulatory
subunit 8" species:242507 "Magnaporthe oryzae 70-15" [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR006746 Pfam:PF03399
GO:GO:0006508 EMBL:CM001234 InterPro:IPR005062 GO:GO:0005838
KO:K03031 PANTHER:PTHR12387 RefSeq:XP_003716407.1
EnsemblFungi:MGG_03512T0 GeneID:2676609 KEGG:mgr:MGG_03512
Uniprot:G4N7Y6
Length = 291
Score = 100 (40.3 bits), Expect = 8.7e-05, P = 8.7e-05
Identities = 31/85 (36%), Positives = 42/85 (49%)
Query: 40 NRVAEFHMELERIQYE---DMIFLA-KDG-VPSPRYNAFMETLIDTTRNEIASCIEKAYT 94
+R + + LER E D ++ A K G VP Y F E L R EIAS E+AY
Sbjct: 162 DRYLGYPIRLERWLMEGSYDRVWKAMKKGEVPCEEYGVFSEILTIQIRAEIASSSERAYP 221
Query: 95 VISVGDTAQKLHIGSEKQMVEFGKK 119
+ + T L + SE +VEF K+
Sbjct: 222 SLPISSTKSLLFLESEGAVVEFAKR 246
>ASPGD|ASPL0000034023 [details] [associations]
symbol:AN3019 species:162425 "Emericella nidulans"
[GO:0006511 "ubiquitin-dependent protein catabolic process"
evidence=IEA] [GO:0005634 "nucleus" evidence=IEA] [GO:0008541
"proteasome regulatory particle, lid subcomplex" evidence=IEA]
[GO:0034515 "proteasome storage granule" evidence=IEA] [GO:0003674
"molecular_function" evidence=ND] InterPro:IPR006746 Pfam:PF03399
GO:GO:0006508 EMBL:BN001306 InterPro:IPR005062 GO:GO:0005838
PANTHER:PTHR12387 OMA:RDEIGAC EnsemblFungi:CADANIAT00010060
Uniprot:C8VIV4
Length = 276
Score = 97 (39.2 bits), Expect = 0.00017, P = 0.00017
Identities = 20/55 (36%), Positives = 31/55 (56%)
Query: 65 VPSPRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQKLHIGSEKQMVEFGKK 119
VPS + F L+ T R+EIA C EKAY + + + L + SE ++EF ++
Sbjct: 174 VPSEDFALFSNVLVGTIRSEIADCSEKAYPSLPISNAKNLLFLESEGAVMEFAQQ 228
>POMBASE|SPBC16G5.01 [details] [associations]
symbol:rpn12 "19S proteasome regulatory subunit Rpn12"
species:4896 "Schizosaccharomyces pombe" [GO:0003674
"molecular_function" evidence=ND] [GO:0005634 "nucleus"
evidence=IDA] [GO:0005829 "cytosol" evidence=IDA] [GO:0006511
"ubiquitin-dependent protein catabolic process" evidence=ISO]
[GO:0007346 "regulation of mitotic cell cycle" evidence=IC]
[GO:0008541 "proteasome regulatory particle, lid subcomplex"
evidence=ISO] InterPro:IPR006746 PomBase:SPBC16G5.01 Pfam:PF03399
GO:GO:0005829 GO:GO:0005634 GO:GO:0007346 EMBL:CU329671
GenomeReviews:CU329671_GR GO:GO:0008541 GO:GO:0006511
InterPro:IPR005062 eggNOG:NOG285042 HOGENOM:HOG000196008 KO:K03031
PANTHER:PTHR12387 OMA:SENKHLM EMBL:X92682 PIR:T40280
RefSeq:NP_596750.2 PDB:4B0Z PDBsum:4B0Z ProteinModelPortal:P50524
IntAct:P50524 STRING:P50524 EnsemblFungi:SPBC16G5.01.1
GeneID:2540025 KEGG:spo:SPBC16G5.01 OrthoDB:EOG483HF4
NextBio:20801168 Uniprot:P50524
Length = 270
Score = 90 (36.7 bits), Expect = 0.00095, P = 0.00095
Identities = 20/64 (31%), Positives = 37/64 (57%)
Query: 68 PRYNAFMETLIDTTRNEIASCIEKAYTVISVGDTAQKLHIGS----EKQMVEFGKKVKN- 122
P ++ FM+ ++ RNEIA+C EK Y+ I + + L++ + EK E G +++
Sbjct: 158 PEFSYFMKIVMSMVRNEIATCAEKVYSEIPLSNATSLLYLENTKETEKLAEERGWDIRDG 217
Query: 123 IVYF 126
++YF
Sbjct: 218 VIYF 221
Parameters:
V=100
filter=SEG
E=0.001
ctxfactor=1.00
Query ----- As Used ----- ----- Computed ----
Frame MatID Matrix name Lambda K H Lambda K H
+0 0 BLOSUM62 0.321 0.135 0.381 same same same
Q=9,R=2 0.244 0.0300 0.180 n/a n/a n/a
Query
Frame MatID Length Eff.Length E S W T X E2 S2
+0 0 132 105 0.00091 102 3 11 22 0.39 30
29 0.39 32
Statistics:
Database: /share/blast/go-seqdb.fasta
Title: go_20130330-seqdb.fasta
Posted: 5:47:42 AM PDT Apr 1, 2013
Created: 5:47:42 AM PDT Apr 1, 2013
Format: XDF-1
# of letters in database: 169,044,731
# of sequences in database: 368,745
# of database sequences satisfying E: 24
No. of states in DFA: 517 (55 KB)
Total size of DFA: 103 KB (2072 KB)
Time to generate neighborhood: 0.00u 0.00s 0.00t Elapsed: 00:00:01
No. of threads or processors used: 24
Search cpu time: 11.17u 0.06s 11.23t Elapsed: 00:00:04
Total cpu time: 11.17u 0.06s 11.23t Elapsed: 00:00:06
Start: Thu Aug 15 14:40:39 2013 End: Thu Aug 15 14:40:45 2013