BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13232
(111 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|66822265|ref|XP_644487.1| RNA exonuclease 2 [Dictyostelium discoideum AX4]
gi|66822817|ref|XP_644763.1| RNA exonuclease 2 [Dictyostelium discoideum AX4]
gi|122057700|sp|Q556Y2.1|ORN_DICDI RecName: Full=Probable oligoribonuclease; AltName: Full=RNA
exonuclease 2 homolog
gi|60472610|gb|EAL70561.1| RNA exonuclease 2 [Dictyostelium discoideum AX4]
gi|60472946|gb|EAL70895.1| RNA exonuclease 2 [Dictyostelium discoideum AX4]
Length = 190
Score = 67.8 bits (164), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVGE 92
++ ++EVL+NMN+WC+EHH SGLT+ VR S +S+EEA+K + +FV K+ P+ G
Sbjct: 59 IHRSDEVLKNMNDWCIEHHGKSGLTEDVRNSKISLEEAEKIMLEFVRKHTDKGICPLAGN 118
Query: 93 --YHTSKELLKDSDHF 106
+ + LLK+ F
Sbjct: 119 TVHEDRRFLLKEMPTF 134
>gi|384251560|gb|EIE25037.1| ribonuclease H-like protein, partial [Coccomyxa subellipsoidea
C-169]
Length = 187
Score = 67.4 bits (163), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 48/73 (65%), Gaps = 1/73 (1%)
Query: 30 KCGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPM 89
+ + +E VL +MN WC++HH ASGLT R R S+VSIE+A+++L +FV ++ +P A +
Sbjct: 40 EIAIQQSEAVLASMNPWCIDHHGASGLTQRCRESTVSIEQAEEQLLEFVGRHTEPGEARL 99
Query: 90 VG-EYHTSKELLK 101
G H + L+
Sbjct: 100 AGNSVHVDMQFLR 112
>gi|330802757|ref|XP_003289380.1| hypothetical protein DICPUDRAFT_56059 [Dictyostelium purpureum]
gi|325080536|gb|EGC34087.1| hypothetical protein DICPUDRAFT_56059 [Dictyostelium purpureum]
Length = 187
Score = 67.4 bits (163), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 42/59 (71%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + EVL++MN WC++HH SGLTDRV+ S ++IEEA + F+ K+V + AP+ G
Sbjct: 54 IHRSNEVLESMNSWCIDHHGKSGLTDRVKNSKITIEEAQLEMFNFIEKHVGKEQAPLAG 112
>gi|390357728|ref|XP_780396.2| PREDICTED: oligoribonuclease, mitochondrial-like
[Strongylocentrotus purpuratus]
Length = 222
Score = 66.2 bits (160), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 42/65 (64%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L MN+WCV+HH ASGL D V+AS +++++A+ + FV +Y PK P+ G H
Sbjct: 93 DEILDKMNDWCVQHHTASGLVDAVKASKITLQQAEYEMLSFVREYTYPKLCPLAGNSIHV 152
Query: 96 SKELL 100
K L
Sbjct: 153 DKTFL 157
>gi|89255617|ref|YP_512978.1| oligoribonuclease [Francisella tularensis subsp. holarctica LVS]
gi|134302673|ref|YP_001122642.1| oligoribonuclease [Francisella tularensis subsp. tularensis
WY96-3418]
gi|156501565|ref|YP_001427630.1| oligoribonuclease [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|187932223|ref|YP_001892208.1| oligoribonuclease [Francisella tularensis subsp. mediasiatica
FSC147]
gi|254367012|ref|ZP_04983048.1| oligoribonuclease [Francisella tularensis subsp. holarctica 257]
gi|254368614|ref|ZP_04984630.1| oligoribonuclease [Francisella tularensis subsp. holarctica FSC022]
gi|290953723|ref|ZP_06558344.1| oligoribonuclease [Francisella tularensis subsp. holarctica URFT1]
gi|421752577|ref|ZP_16189599.1| oligoribonuclease [Francisella tularensis subsp. tularensis AS_713]
gi|421754444|ref|ZP_16191416.1| oligoribonuclease [Francisella tularensis subsp. tularensis 831]
gi|421758172|ref|ZP_16195029.1| oligoribonuclease [Francisella tularensis subsp. tularensis
80700103]
gi|421760000|ref|ZP_16196824.1| oligoribonuclease [Francisella tularensis subsp. tularensis
70102010]
gi|422938119|ref|YP_007011266.1| oligoribonuclease [Francisella tularensis subsp. holarctica FSC200]
gi|423049929|ref|YP_007008363.1| oligoribonuclease [Francisella tularensis subsp. holarctica F92]
gi|122501292|sp|Q2A5M3.1|ORN_FRATH RecName: Full=Oligoribonuclease
gi|166216258|sp|A7N9M1.1|ORN_FRATF RecName: Full=Oligoribonuclease
gi|166216260|sp|A4J020.1|ORN_FRATW RecName: Full=Oligoribonuclease
gi|89143448|emb|CAJ78624.1| Oligoribonuclease [Francisella tularensis subsp. holarctica LVS]
gi|134050450|gb|ABO47521.1| exonuclease [Francisella tularensis subsp. tularensis WY96-3418]
gi|134252838|gb|EBA51932.1| oligoribonuclease [Francisella tularensis subsp. holarctica 257]
gi|156252168|gb|ABU60674.1| oligoribonuclease [Francisella tularensis subsp. holarctica
FTNF002-00]
gi|157121517|gb|EDO65708.1| oligoribonuclease [Francisella tularensis subsp. holarctica FSC022]
gi|187713132|gb|ACD31429.1| oligoribonuclease (3'->5' exoribonuclease) [Francisella tularensis
subsp. mediasiatica FSC147]
gi|407293270|gb|AFT92176.1| oligoribonuclease [Francisella tularensis subsp. holarctica FSC200]
gi|409084616|gb|EKM84786.1| oligoribonuclease [Francisella tularensis subsp. tularensis 831]
gi|409084795|gb|EKM84958.1| oligoribonuclease [Francisella tularensis subsp. tularensis AS_713]
gi|409089917|gb|EKM89949.1| oligoribonuclease [Francisella tularensis subsp. tularensis
70102010]
gi|409090256|gb|EKM90278.1| oligoribonuclease [Francisella tularensis subsp. tularensis
80700103]
gi|421950651|gb|AFX69900.1| oligoribonuclease [Francisella tularensis subsp. holarctica F92]
Length = 178
Score = 65.1 bits (157), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+Y +EVL NMNEWC++ H +GLT RV+ S +S E A++++ +F+ K+V +++P+ G
Sbjct: 46 AIYQPDEVLANMNEWCIKTHTETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCG 105
>gi|56707385|ref|YP_169281.1| oligoribonuclease [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110669856|ref|YP_666413.1| oligoribonuclease [Francisella tularensis subsp. tularensis FSC198]
gi|254370915|ref|ZP_04986920.1| oligoribonuclease [Francisella tularensis subsp. tularensis FSC033]
gi|254874223|ref|ZP_05246933.1| oligoribonuclease [Francisella tularensis subsp. tularensis
MA00-2987]
gi|379716581|ref|YP_005304917.1| 3'-to-5' oligoribonuclease [Francisella tularensis subsp.
tularensis TIGB03]
gi|379725264|ref|YP_005317450.1| 3'-to-5' oligoribonuclease [Francisella tularensis subsp.
tularensis TI0902]
gi|385793989|ref|YP_005830395.1| oligoribonuclease [Francisella tularensis subsp. tularensis
NE061598]
gi|421754846|ref|ZP_16191808.1| oligoribonuclease [Francisella tularensis subsp. tularensis
80700075]
gi|81820821|sp|Q5NI61.1|ORN_FRATT RecName: Full=Oligoribonuclease
gi|123169637|sp|Q14JL3.1|ORN_FRAT1 RecName: Full=Oligoribonuclease
gi|56603877|emb|CAG44861.1| Oligoribonuclease [Francisella tularensis subsp. tularensis SCHU
S4]
gi|110320189|emb|CAL08244.1| Oligoribonuclease [Francisella tularensis subsp. tularensis FSC198]
gi|151569158|gb|EDN34812.1| oligoribonuclease [Francisella tularensis subsp. tularensis FSC033]
gi|254840222|gb|EET18658.1| oligoribonuclease [Francisella tularensis subsp. tularensis
MA00-2987]
gi|282158524|gb|ADA77915.1| oligoribonuclease [Francisella tularensis subsp. tularensis
NE061598]
gi|377826713|gb|AFB79961.1| 3'-to-5' oligoribonuclease (orn) [Francisella tularensis subsp.
tularensis TI0902]
gi|377828258|gb|AFB78337.1| 3'-to-5' oligoribonuclease (orn) [Francisella tularensis subsp.
tularensis TIGB03]
gi|409089971|gb|EKM89999.1| oligoribonuclease [Francisella tularensis subsp. tularensis
80700075]
Length = 178
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+Y +EVL NMNEWC++ H +GLT RV+ S +S E A++++ +F+ K+V +++P+ G
Sbjct: 46 AIYQPDEVLANMNEWCIKTHTETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCG 105
>gi|115314122|ref|YP_762845.1| oligoribonuclease [Francisella tularensis subsp. holarctica OSU18]
gi|122325833|sp|Q0BNX6.1|ORN_FRATO RecName: Full=Oligoribonuclease
gi|115129021|gb|ABI82208.1| oligoribonuclease [Francisella tularensis subsp. holarctica OSU18]
Length = 178
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+Y +EVL NMNEWC++ H +GLT RV+ S +S E A++++ +F+ K+V +++P+ G
Sbjct: 46 AIYQPDEVLANMNEWCIKTHTETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCG 105
>gi|424675325|ref|ZP_18112232.1| oligoribonuclease [Francisella tularensis subsp. tularensis
70001275]
gi|417434080|gb|EKT89052.1| oligoribonuclease [Francisella tularensis subsp. tularensis
70001275]
Length = 178
Score = 65.1 bits (157), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+Y +EVL NMNEWC++ H +GLT RV+ S +S E A++++ +F+ K+V +++P+ G
Sbjct: 46 AIYQPDEVLANMNEWCIKTHTETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCG 105
>gi|62263510|gb|AAX78167.1| unknown protein [synthetic construct]
Length = 213
Score = 64.7 bits (156), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+Y +EVL NMNEWC++ H +GLT RV+ S +S E A++++ +F+ K+V +++P+ G
Sbjct: 72 AIYQPDEVLANMNEWCIKTHTETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCG 131
>gi|254372051|ref|ZP_04987544.1| oligoribonuclease [Francisella tularensis subsp. novicida
GA99-3549]
gi|254375197|ref|ZP_04990677.1| oligoribonuclease [Francisella novicida GA99-3548]
gi|385791990|ref|YP_005824966.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|151569782|gb|EDN35436.1| oligoribonuclease [Francisella novicida GA99-3549]
gi|151572915|gb|EDN38569.1| oligoribonuclease [Francisella novicida GA99-3548]
gi|328676136|gb|AEB27006.1| Oligoribonuclease [Francisella cf. novicida Fx1]
Length = 178
Score = 63.9 bits (154), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 43/60 (71%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+Y +EVL NMNEWC++ H +GLT RV+ S +S E A++++ +F+ K+V +++P+ G
Sbjct: 46 AIYQPDEVLANMNEWCIKTHAETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCG 105
>gi|387823630|ref|YP_005823101.1| oligoribonuclease [Francisella cf. novicida 3523]
gi|328675229|gb|AEB27904.1| Oligoribonuclease [Francisella cf. novicida 3523]
Length = 178
Score = 63.5 bits (153), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 44/60 (73%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+Y +EVL MNEWC++ H +GLT RV+AS++S E A++++ +F+ ++V +++P+ G
Sbjct: 46 AIYQPDEVLATMNEWCIKTHAETGLTQRVKASTISTEAAEQQILEFIREFVPYQSSPLCG 105
>gi|198438327|ref|XP_002132043.1| PREDICTED: similar to small fragment nuclease [Ciona intestinalis]
Length = 205
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/76 (38%), Positives = 47/76 (61%), Gaps = 4/76 (5%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVGE 92
++ ++EVL NMNEWC+E H SGLT+ VR S +++ +A+ + +F+ K+ K P+ G
Sbjct: 74 IHQSDEVLNNMNEWCIEQHGRSGLTESVRKSMITLTQAEDIMLKFIQKHAPYKVCPLAGN 133
Query: 93 -YHTSKELLKDSDHFL 107
H K L DH++
Sbjct: 134 TIHADKRFL---DHYM 146
>gi|377555831|ref|ZP_09785559.1| oligoribonuclease [endosymbiont of Bathymodiolus sp.]
Length = 181
Score = 63.2 bits (152), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+Y ++E+L M+EW EHH SGL R++ S VSI++A+K+ F+ YV P +PM G
Sbjct: 47 AIYQSDEILAGMDEWNTEHHTNSGLVQRIKDSHVSIQQAEKQTIDFLQAYVNPSASPMCG 106
>gi|221133715|ref|ZP_03560020.1| oligoribonuclease [Glaciecola sp. HTCC2999]
Length = 191
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+Y ++VL NMNEWC+E H +GLT R R S S+EEA F+ YV +T+P+ G
Sbjct: 57 AIYQPDDVLANMNEWCIETHGKTGLTQRCRESKYSVEEAQAETIAFLQAYVPERTSPLCG 116
>gi|356960535|ref|ZP_09063517.1| oligoribonuclease [gamma proteobacterium SCGC AAA001-B15]
Length = 180
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/61 (44%), Positives = 39/61 (63%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ N + L++M+EW HN SGL RV+ S +S+ EA+K+ FV KYV P T+PM
Sbjct: 45 LAIHQNNKYLESMDEWNTRQHNKSGLVQRVKESEISVNEAEKQTLDFVMKYVDPGTSPMC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|195145416|ref|XP_002013689.1| GL24271 [Drosophila persimilis]
gi|198452116|ref|XP_001358637.2| GA10162 [Drosophila pseudoobscura pseudoobscura]
gi|194102632|gb|EDW24675.1| GL24271 [Drosophila persimilis]
gi|198131794|gb|EAL27778.2| GA10162 [Drosophila pseudoobscura pseudoobscura]
Length = 187
Score = 62.8 bits (151), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 23 LQTQGTCKCGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV 82
++++G C + Y E+V +NMNEWC++HHN SGL DR R+S V+ ++A + ++ K +
Sbjct: 45 IKSEGPC-FAINYPEDVYKNMNEWCIKHHNESGLIDRCRSSDVTPDKAGDLVMSYLQKNI 103
Query: 83 KPKTAPMVG 91
P+ G
Sbjct: 104 PKGKCPLAG 112
>gi|393762918|ref|ZP_10351541.1| oligoribonuclease [Alishewanella agri BL06]
gi|392605835|gb|EIW88723.1| oligoribonuclease [Alishewanella agri BL06]
Length = 182
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+E+L NM+ WCVE H SGLT R RAS+V++ EA+++ F+++YV +PM G
Sbjct: 52 DEILDNMDPWCVEQHGKSGLTARCRASTVTLAEAEQQTIAFLSQYVSKGKSPMCG 106
>gi|375110842|ref|ZP_09757058.1| oligoribonuclease [Alishewanella jeotgali KCTC 22429]
gi|397169515|ref|ZP_10492947.1| oligoribonuclease [Alishewanella aestuarii B11]
gi|374569066|gb|EHR40233.1| oligoribonuclease [Alishewanella jeotgali KCTC 22429]
gi|396088819|gb|EJI86397.1| oligoribonuclease [Alishewanella aestuarii B11]
Length = 182
Score = 62.4 bits (150), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 39/55 (70%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+E+L NM+ WCVE H SGLT R RAS+V++ EA+++ F+++YV +PM G
Sbjct: 52 DEILDNMDPWCVEQHGKSGLTARCRASTVTLAEAEQQTIAFLSQYVSKGKSPMCG 106
>gi|328873520|gb|EGG21887.1| nucleotide binding protein 1-like protein [Dictyostelium
fasciculatum]
Length = 879
Score = 62.0 bits (149), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVGE 92
+Y ++ L M +WC EHH SGLT R R S +SI+EA+K + +F+AK+V P+ G
Sbjct: 144 VYIDDAALDGMGKWCKEHHGDSGLTQRCRESKISIQEAEKIMVEFLAKHVHKGMCPLAGN 203
Query: 93 --YHTSKELLKDSDHF 106
+ K LLK+ F
Sbjct: 204 TVHEDKKFLLKEMPLF 219
>gi|118602163|ref|YP_903378.1| oligoribonuclease [Candidatus Ruthia magnifica str. Cm (Calyptogena
magnifica)]
gi|166216583|sp|A1AVF0.1|ORN_RUTMC RecName: Full=Oligoribonuclease
gi|118567102|gb|ABL01907.1| Exonuclease, RNase T and DNA polymerase III [Candidatus Ruthia
magnifica str. Cm (Calyptogena magnifica)]
Length = 180
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 47/73 (64%), Gaps = 1/73 (1%)
Query: 19 VKAYLQTQGTCKCGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFV 78
V+ ++ QG ++ N+E+L NM++W EHH +SGL RVR SS+S ++A+ + +F+
Sbjct: 34 VQLHIIAQGPSLV-IHQNDEILSNMDQWNTEHHTSSGLLRRVRESSLSCKQAEAQTLEFL 92
Query: 79 AKYVKPKTAPMVG 91
KYV +PM G
Sbjct: 93 KKYVHTGASPMCG 105
>gi|195392333|ref|XP_002054812.1| GJ24646 [Drosophila virilis]
gi|194152898|gb|EDW68332.1| GJ24646 [Drosophila virilis]
Length = 187
Score = 61.2 bits (147), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 23 LQTQGTCKC-GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKY 81
L + C C + + +V NMNEWC++HHN SGL D+ + S V+ E A+ + F+ +Y
Sbjct: 43 LNIKAECLCFAIRHPPQVYNNMNEWCIKHHNESGLIDKCKESDVTPELAENIILSFLKQY 102
Query: 82 VKPKTAPMVG 91
+ K P+ G
Sbjct: 103 IPEKKCPLAG 112
>gi|374724072|gb|EHR76152.1| oligoribonuclease [uncultured marine group II euryarchaeote]
Length = 180
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +E+L+NM+EW HH ASGL DRV+ SVS++EA+ + +F+ K+V AP+
Sbjct: 46 LAVHVADELLENMDEWNTSHHTASGLVDRVKHESVSVQEAEAQTLEFLKKWVPEGKAPLC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|196004630|ref|XP_002112182.1| hypothetical protein TRIADDRAFT_23482 [Trichoplax adhaerens]
gi|190586081|gb|EDV26149.1| hypothetical protein TRIADDRAFT_23482, partial [Trichoplax
adhaerens]
Length = 165
Score = 60.8 bits (146), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 41/59 (69%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + ++ NM+EWC EHH SGLT+ V++S++S+++A+ + FV ++ PK P+ G
Sbjct: 32 IHQPDSIMDNMDEWCTEHHGKSGLTNAVKSSTISLQQAENTMLDFVRQHTLPKRCPLAG 90
>gi|256821737|ref|YP_003145700.1| Exonuclease RNase T and DNA polymerase III [Kangiella koreensis DSM
16069]
gi|256795276|gb|ACV25932.1| Exonuclease RNase T and DNA polymerase III [Kangiella koreensis DSM
16069]
Length = 182
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 40/60 (66%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++EVL NMNEWCV H SGLT+RVR SS++ ++A +F+ K++ +PM G
Sbjct: 47 AIHQSDEVLDNMNEWCVVQHGKSGLTERVRQSSINEDQASDLTLEFLKKWIDEGKSPMCG 106
>gi|241613193|ref|XP_002407353.1| YJER protein, putative [Ixodes scapularis]
gi|215502777|gb|EEC12271.1| YJER protein, putative [Ixodes scapularis]
Length = 171
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +EVL+ MN+WC EHH SGLT R SSV++EEA++R+ V++ V P + G
Sbjct: 76 AIHQPDEVLEGMNDWCKEHHGKSGLTQACRESSVTVEEAEQRVLSLVSQLVPPGKCHLAG 135
>gi|328710082|ref|XP_001950486.2| PREDICTED: oligoribonuclease, mitochondrial-like [Acyrthosiphon
pisum]
Length = 212
Score = 60.8 bits (146), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 41/59 (69%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +++VL+NM EW +HH SGLT+ VR S++SIE+AD+ L++F+ + P+ G
Sbjct: 79 IHQSDKVLENMEEWSKKHHGISGLTENVRKSNISIEQADQMLYEFIKPFAPKGVCPLAG 137
>gi|384499133|gb|EIE89624.1| hypothetical protein RO3G_14335 [Rhizopus delemar RA 99-880]
Length = 185
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG- 91
+Y +E++ +MNEWC EHH SGLT +V S ++ +EA++++ +F+ +++ AP+ G
Sbjct: 47 IYQPKEIMDSMNEWCTEHHGKSGLTQKVLESKITTKEAERQVFEFLQQHIPKGVAPLAGN 106
Query: 92 EYHTSKELL 100
H K L
Sbjct: 107 SVHADKVFL 115
>gi|91093385|ref|XP_971552.1| PREDICTED: similar to AGAP012804-PA [Tribolium castaneum]
gi|270015360|gb|EFA11808.1| hypothetical protein TcasGA2_TC008587 [Tribolium castaneum]
Length = 211
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+++ + +L MNEWC HH+ SGL++ S +S+EEA +L FVA+YV K +P+ G
Sbjct: 76 IHHPQNILDKMNEWCKTHHSKSGLSEACLKSKISVEEAQDKLMDFVAEYVTEKVSPLAG 134
>gi|443694287|gb|ELT95470.1| hypothetical protein CAPTEDRAFT_101539 [Capitella teleta]
Length = 179
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 41/61 (67%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +++VL MNEWCV H A+GLTDRVRAS++S +A++ F+ K++ +PM
Sbjct: 45 IAVHQSDDVLDIMNEWCVNTHGATGLTDRVRASTISESQAEQITLDFLRKHIDQGISPMC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|149197758|ref|ZP_01874808.1| oligoribonuclease [Lentisphaera araneosa HTCC2155]
gi|149139328|gb|EDM27731.1| oligoribonuclease [Lentisphaera araneosa HTCC2155]
Length = 184
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 44/66 (66%), Gaps = 1/66 (1%)
Query: 26 QGTCKCGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK 85
+G C ++ ++EV+ NMN+WC++HH SGLT V+ S+VS EEA ++ F+ ++ +
Sbjct: 41 KGPCLI-IHQSDEVMNNMNDWCIKHHGESGLTQAVKESTVSQEEACRQTRDFILEFCEKG 99
Query: 86 TAPMVG 91
AP+ G
Sbjct: 100 RAPLCG 105
>gi|88800702|ref|ZP_01116261.1| oligoribonuclease [Reinekea blandensis MED297]
gi|88776566|gb|EAR07782.1| oligoribonuclease [Reinekea sp. MED297]
Length = 182
Score = 60.5 bits (145), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 40/59 (67%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ VL M+EWC HH SGLT++VR SS+S+ +A+ FV ++V+P +P+ G
Sbjct: 47 IHQSDAVLDGMDEWCTTHHGESGLTEKVRNSSISVAQAEAETLAFVEQWVEPGCSPLCG 105
>gi|254876105|ref|ZP_05248815.1| oligoribonuclease [Francisella philomiragia subsp. philomiragia
ATCC 25015]
gi|254842126|gb|EET20540.1| oligoribonuclease [Francisella philomiragia subsp. philomiragia
ATCC 25015]
Length = 178
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 45/60 (75%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L +MNEWC++ H +GLT RV+ S S+++A++++ +F+ +YV +++P+ G
Sbjct: 46 AIHQSDEILNSMNEWCIKVHGETGLTQRVKDSKTSLKQAEQKILEFIKEYVPYQSSPLCG 105
>gi|405966049|gb|EKC31374.1| Oligoribonuclease, mitochondrial [Crassostrea gigas]
Length = 182
Score = 60.1 bits (144), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG- 91
++ + VL NM EWC E H SGLT+ VR S + + A+K++ +FV Y+ P P+ G
Sbjct: 49 IHQPDSVLNNMGEWCTEQHGKSGLTEAVRNSKIDLGAAEKKMVEFVKPYIAPSLCPLAGN 108
Query: 92 EYHTSKELLK 101
H K L+
Sbjct: 109 SIHCDKMFLE 118
>gi|337754070|ref|YP_004646581.1| 3'-to-5' oligoribonuclease [Francisella sp. TX077308]
gi|336445675|gb|AEI34981.1| 3'-to-5' oligoribonuclease (orn) [Francisella sp. TX077308]
Length = 178
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 42/60 (70%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L MNEWC++ H +GLT RV+ S S++EA+++ F+ +YV +++P+ G
Sbjct: 46 AIHQSDEILNTMNEWCIKVHGETGLTQRVKDSKTSLKEAERKTLDFIKQYVPYQSSPLCG 105
>gi|322788644|gb|EFZ14245.1| hypothetical protein SINV_00413 [Solenopsis invicta]
Length = 189
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/53 (45%), Positives = 38/53 (71%)
Query: 39 VLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+L+NMN+WC E+H +GLT R+S+VS+EEA+K + F+ KY ++ P+ G
Sbjct: 67 ILENMNDWCKENHTKTGLTQNSRSSTVSLEEAEKMVLNFLKKYTLERSCPLAG 119
>gi|304311523|ref|YP_003811121.1| oligoribonuclease [gamma proteobacterium HdN1]
gi|301797256|emb|CBL45476.1| Oligoribonuclease [gamma proteobacterium HdN1]
Length = 184
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 39/55 (70%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+E+L M+EWC H SGLT RVRAS+V+ +A+ + +F+ ++V P+T+P+ G
Sbjct: 52 DEILNGMDEWCTTQHGKSGLTARVRASTVNDAQAEAQTIEFLKEWVDPRTSPICG 106
>gi|118496683|ref|YP_897733.1| oligoribonuclease [Francisella novicida U112]
gi|194323992|ref|ZP_03057767.1| exonuclease family protein [Francisella novicida FTE]
gi|208780043|ref|ZP_03247386.1| exonuclease family protein [Francisella novicida FTG]
gi|166216259|sp|A0Q414.1|ORN_FRATN RecName: Full=Oligoribonuclease
gi|118422589|gb|ABK88979.1| oligoribonuclease (3'->5' exoribonuclease) [Francisella novicida
U112]
gi|194321889|gb|EDX19372.1| exonuclease family protein [Francisella tularensis subsp. novicida
FTE]
gi|208744047|gb|EDZ90348.1| exonuclease family protein [Francisella novicida FTG]
Length = 178
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 44/60 (73%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L +MNEWC++ H +GLT RV+ S +S E A++++ +F+ K+V +++P+ G
Sbjct: 46 AIHQSDEILNSMNEWCIKVHCETGLTQRVKDSKISTEAAEQQILEFIRKFVPYQSSPLCG 105
>gi|406938804|gb|EKD71955.1| hypothetical protein ACD_46C00048G0001 [uncultured bacterium]
Length = 183
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 41/60 (68%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+++++++L M+EWCV H +SGLTDRV+ S ++ +A+K +F+ +YV +PM G
Sbjct: 47 AIHHSDKILSKMDEWCVNQHGSSGLTDRVKKSKITTSKAEKLTLEFLREYVPESKSPMCG 106
>gi|387885786|ref|YP_006316085.1| oligoribonuclease [Francisella noatunensis subsp. orientalis str.
Toba 04]
gi|386870602|gb|AFJ42609.1| oligoribonuclease [Francisella noatunensis subsp. orientalis str.
Toba 04]
Length = 178
Score = 59.7 bits (143), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 45/59 (76%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L +MNEWC++ H +GLT RV+ S S+++A++++ +F+ +YV +++P+ G
Sbjct: 47 IHQSDEILNSMNEWCIKVHGETGLTQRVKDSKTSLKQAEQKILEFIKEYVPFQSSPLCG 105
>gi|410914582|ref|XP_003970766.1| PREDICTED: oligoribonuclease, mitochondrial-like [Takifugu
rubripes]
Length = 242
Score = 59.3 bits (142), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L M+EWC+EHH SGLT VR S +++E+A+ FV ++ P P+ G H
Sbjct: 97 DELLDGMSEWCIEHHGKSGLTQAVRHSKITLEQAEYEFLSFVRQHTPPGQCPLAGNSVHA 156
Query: 96 SKELLK 101
K L+
Sbjct: 157 DKRFLE 162
>gi|383934271|ref|ZP_09987713.1| oligoribonuclease [Rheinheimera nanhaiensis E407-8]
gi|383704727|dbj|GAB57804.1| oligoribonuclease [Rheinheimera nanhaiensis E407-8]
Length = 182
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 26/55 (47%), Positives = 37/55 (67%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+EVL NM+ WCVE H SGLT R RAS+ S+ A+++ F+++YV +PM G
Sbjct: 52 DEVLDNMSAWCVEQHGKSGLTARCRASTTSLAAAEQQTIAFLSQYVAKGKSPMCG 106
>gi|254571599|ref|XP_002492909.1| RNA exonuclease, required for U4 snRNA maturation [Komagataella
pastoris GS115]
gi|238032707|emb|CAY70730.1| RNA exonuclease, required for U4 snRNA maturation [Komagataella
pastoris GS115]
Length = 213
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 40/59 (67%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++Y+ +V+ MNEWC+EHH SGLT +V S+ ++ + + L +++++++P T M G
Sbjct: 78 IHYDNDVMSKMNEWCIEHHGTSGLTKKVLESTKTLPQVESELLSYISQHIEPNTGVMAG 136
>gi|149924278|ref|ZP_01912650.1| oligoribonuclease [Plesiocystis pacifica SIR-1]
gi|149814858|gb|EDM74424.1| oligoribonuclease [Plesiocystis pacifica SIR-1]
Length = 179
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+++ + VL M+ WC EHH ASGLT VR SS+S+ EA+ + F+ ++ +P +P+ G
Sbjct: 48 VHHGDAVLDGMDAWCTEHHGASGLTQAVRESSISLAEAEAQTLDFLRQHCEPGKSPLCG 106
>gi|195112234|ref|XP_002000679.1| GI22396 [Drosophila mojavensis]
gi|193917273|gb|EDW16140.1| GI22396 [Drosophila mojavensis]
Length = 187
Score = 59.3 bits (142), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 23 LQTQGTCKCGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV 82
++++G C + + E V +NMNEWC++HHN SGL DR R+S V+ ++A+ + ++ +
Sbjct: 45 IKSEGPC-FTIKHPENVYENMNEWCIKHHNESGLVDRCRSSEVTPDQAENLILTYLKANI 103
Query: 83 KPKTAPMVG 91
+ P+ G
Sbjct: 104 PERKCPLAG 112
>gi|440794028|gb|ELR15199.1| Oligoribonuclease, mitochondrial precursor, putative [Acanthamoeba
castellanii str. Neff]
Length = 206
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/70 (40%), Positives = 43/70 (61%), Gaps = 1/70 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVGE 92
++ ++VL +MN+WC HH ASGLT R S VS+ EA++R+ +FV + +P A + G
Sbjct: 54 IHQPDDVLDSMNDWCKTHHGASGLTQACRESKVSVAEAEERMLRFVEAHTQPGAAILAGN 113
Query: 93 -YHTSKELLK 101
H K L+
Sbjct: 114 TVHADKGFLQ 123
>gi|281201272|gb|EFA75484.1| RNA exonuclease 2 [Polysphondylium pallidum PN500]
Length = 451
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 45/69 (65%), Gaps = 1/69 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG- 91
++ +++ L +M++WC EHH SGLT++ R S +SI++A+K++ +F+ K+V P+ G
Sbjct: 315 VHIDDKDLNSMDQWCTEHHGQSGLTEKCRQSKLSIQDAEKQMVEFLRKHVDKGQCPLAGN 374
Query: 92 EYHTSKELL 100
H K L
Sbjct: 375 SVHQDKRFL 383
>gi|71282475|ref|YP_271028.1| oligoribonuclease [Colwellia psychrerythraea 34H]
gi|123630997|sp|Q47VZ4.1|ORN_COLP3 RecName: Full=Oligoribonuclease
gi|71148215|gb|AAZ28688.1| oligoribonuclease [Colwellia psychrerythraea 34H]
Length = 181
Score = 58.9 bits (141), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/55 (49%), Positives = 34/55 (61%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++VL NMN WC+EHH SGLT R R S VS+ A K FV ++V +PM G
Sbjct: 52 DDVLDNMNPWCIEHHGKSGLTQRCRDSEVSLAHATKESLAFVQEWVPQGKSPMCG 106
>gi|427795697|gb|JAA63300.1| Putative oligoribonuclease 3'---> 5' exoribonuclease, partial
[Rhipicephalus pulchellus]
Length = 279
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/72 (38%), Positives = 42/72 (58%), Gaps = 2/72 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVGE 92
L+ ++VL M EWC EHH SGLT+ R S ++++EA+ +L +V V P P+ G
Sbjct: 129 LHQPDDVLAKMGEWCQEHHGKSGLTEACRKSHLTVKEAEDQLCAYVGGLVMPGQCPLAGS 188
Query: 93 --YHTSKELLKD 102
Y + LL+D
Sbjct: 189 TVYMDRRFLLRD 200
>gi|330815929|ref|YP_004359634.1| oligoribonuclease [Burkholderia gladioli BSR3]
gi|327368322|gb|AEA59678.1| oligoribonuclease [Burkholderia gladioli BSR3]
Length = 202
Score = 58.9 bits (141), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M+ W H SGL DRVRAS+VS EA R+ F+A+YV P +PM G
Sbjct: 59 AIHQSDETLARMDAWNQSTHGRSGLIDRVRASTVSEAEAAARIQAFLAQYVSPGKSPMCG 118
>gi|167626987|ref|YP_001677487.1| oligoribonuclease [Francisella philomiragia subsp. philomiragia
ATCC 25017]
gi|167596988|gb|ABZ86986.1| oligoribonuclease (3'->5' exoribonuclease) [Francisella
philomiragia subsp. philomiragia ATCC 25017]
Length = 178
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 44/60 (73%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L +MNEWC++ H +GLT RV+ S S+++A++++ F+ +YV +++P+ G
Sbjct: 46 AIHQSDEILNSMNEWCIKVHGETGLTQRVKDSKTSLKQAEQKILVFIKEYVPYQSSPLCG 105
>gi|410621784|ref|ZP_11332628.1| oligoribonuclease [Glaciecola pallidula DSM 14239 = ACAM 615]
gi|410158677|dbj|GAC28002.1| oligoribonuclease [Glaciecola pallidula DSM 14239 = ACAM 615]
Length = 185
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+Y +++VL NM+EWCV+ H A+GLT R RAS ++ A + +F+ +YV +P+ G
Sbjct: 51 AVYQSDDVLDNMDEWCVKTHGATGLTARCRASEYDVDAATRETIKFLEQYVAKGKSPLCG 110
>gi|159489154|ref|XP_001702562.1| predicted protein [Chlamydomonas reinhardtii]
gi|158280584|gb|EDP06341.1| predicted protein [Chlamydomonas reinhardtii]
Length = 180
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 40/60 (66%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+++++ VL+ MN+WC EHH ASGLT RVR S V + A++ L F+A++ + A + G
Sbjct: 40 AIHHSDAVLEGMNDWCKEHHGASGLTQRVRDSRVDMGAAEQMLLDFIAEHTEEGMAQLAG 99
>gi|442609992|ref|ZP_21024718.1| 3'-to-5' oligoribonuclease (orn) [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
gi|441748439|emb|CCQ10780.1| 3'-to-5' oligoribonuclease (orn) [Pseudoalteromonas luteoviolacea B
= ATCC 29581]
Length = 181
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L NM+EWC+ H SGLT R +AS+++ E+A K+ F+ +V P +PM G
Sbjct: 47 AIHQSDELLDNMDEWCINQHGRSGLTARCKASTLTEEDAIKQTLDFLKHWVPPGKSPMCG 106
>gi|383861835|ref|XP_003706390.1| PREDICTED: probable oligoribonuclease-like [Megachile rotundata]
Length = 205
Score = 58.5 bits (140), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 40/55 (72%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+E+L NMN+WC++ H +GL D R+S ++I++A++ + +F+ +V+ KT P+ G
Sbjct: 73 DEILNNMNDWCLQTHKKTGLIDASRSSKITIQDAEQAILEFLKLHVEEKTCPLAG 127
>gi|348543638|ref|XP_003459290.1| PREDICTED: oligoribonuclease, mitochondrial-like [Oreochromis
niloticus]
Length = 249
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L+ M+EWC EHH SGLT VR S +++E+A+ FV ++ P P+ G H
Sbjct: 103 DELLEGMSEWCKEHHGKSGLTQAVRDSKITLEQAEYEFLSFVRQHTPPGQCPLAGNSVHA 162
Query: 96 SKELL 100
K L
Sbjct: 163 DKRFL 167
>gi|78065664|ref|YP_368433.1| oligoribonuclease [Burkholderia sp. 383]
gi|123569006|sp|Q39IC7.1|ORN_BURS3 RecName: Full=Oligoribonuclease
gi|77966409|gb|ABB07789.1| Exonuclease [Burkholderia sp. 383]
Length = 206
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 39/60 (65%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRVRAS+V+ EA ++L F+A+YV P +PM G
Sbjct: 59 AIHQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEAEAAEQLQAFLAQYVSPGKSPMCG 118
>gi|406943488|gb|EKD75473.1| hypothetical protein ACD_44C00119G0001 [uncultured bacterium]
Length = 185
Score = 58.2 bits (139), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 37/55 (67%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+E+L+ M++W H ASGL +RV+ S +S +EA+ F+ +YVKPK +PM G
Sbjct: 56 DEILERMDKWNTRQHKASGLVERVKLSQISEKEAESETLLFIKEYVKPKKSPMCG 110
>gi|260822769|ref|XP_002606774.1| hypothetical protein BRAFLDRAFT_59133 [Branchiostoma floridae]
gi|229292118|gb|EEN62784.1| hypothetical protein BRAFLDRAFT_59133 [Branchiostoma floridae]
Length = 180
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG- 91
++ + V+ MN+WC EHH SGLT+ VR S +S++ A+ + FV +Y P P+ G
Sbjct: 45 IHQPDAVMDTMNDWCKEHHGKSGLTEAVRRSELSLQAAEYEMLSFVRQYTPPGVCPLAGN 104
Query: 92 EYHTSKELLK 101
H K+ L+
Sbjct: 105 SVHVDKKFLE 114
>gi|407694606|ref|YP_006819394.1| oligoribonuclease [Alcanivorax dieselolei B5]
gi|407251944|gb|AFT69051.1| Oligoribonuclease [Alcanivorax dieselolei B5]
Length = 180
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 39/60 (65%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +++ L M+EW HH SGLTDRVRAS V EA+++ F+A+YV K +PM G
Sbjct: 46 AVHQSDQRLAAMDEWNTRHHGNSGLTDRVRASRVDEAEAERQTLLFLAQYVDEKMSPMCG 105
>gi|89094643|ref|ZP_01167580.1| oligoribonuclease [Neptuniibacter caesariensis]
gi|89081113|gb|EAR60348.1| oligoribonuclease [Neptuniibacter caesariensis]
Length = 186
Score = 58.2 bits (139), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 40/60 (66%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E++ NM+EWC H SGLT RV+ S+V+ EA++ +F+ +YV+ +PM G
Sbjct: 51 AIHQSDEIMDNMDEWCTNQHGKSGLTQRVKESTVTEAEAEQATIEFLKQYVEAGVSPMCG 110
>gi|168032166|ref|XP_001768590.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162680089|gb|EDQ66528.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 180
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 36/47 (76%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK 83
E+VLQ M EWC EHH ASGLTD VRAS+V+ ++A + + +F+ K+ +
Sbjct: 49 EDVLQGMGEWCQEHHAASGLTDSVRASTVTEDQAQQEVLEFLRKHTR 95
>gi|290970253|ref|XP_002668076.1| predicted protein [Naegleria gruberi]
gi|284081197|gb|EFC35332.1| predicted protein [Naegleria gruberi]
Length = 111
Score = 57.8 bits (138), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 29/78 (37%), Positives = 45/78 (57%), Gaps = 1/78 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKP-KTAPMVG 91
++ ++ VL NMN+WC +HH SGLT VR S++SI++ + + FV YV + AP+ G
Sbjct: 34 VHQSDSVLDNMNDWCKQHHGDSGLTAAVRKSTLSIQQVEDTVLDFVKHYVASERLAPLAG 93
Query: 92 EYHTSKELLKDSDHFLVF 109
L +FL+F
Sbjct: 94 NSVYCDRLFMKYVNFLLF 111
>gi|152996651|ref|YP_001341486.1| oligoribonuclease [Marinomonas sp. MWYL1]
gi|150837575|gb|ABR71551.1| Exonuclease RNase T and DNA polymerase III [Marinomonas sp. MWYL1]
Length = 185
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 41/60 (68%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + V+ M+EWC +HH SGLT RV +S++S+E+A++ +F+A+YV +P+ G
Sbjct: 47 AIHQEKAVMDAMDEWCTQHHGDSGLTARVLSSTISMEQAEEETIKFLAQYVPAGKSPICG 106
>gi|160872136|ref|ZP_02062268.1| oligoribonuclease Orn [Rickettsiella grylli]
gi|159120935|gb|EDP46273.1| oligoribonuclease Orn [Rickettsiella grylli]
Length = 181
Score = 57.8 bits (138), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E +L +M++W H SGL DRVR S ++ EEA+K+ +F+ K+V P+ +PM G
Sbjct: 47 AIFQSESILTHMDDWNKRQHKNSGLLDRVRLSKMTEEEAEKQTLEFIMKHVPPQKSPMCG 106
>gi|262198353|ref|YP_003269562.1| exonuclease RNase T and DNA polymerase III [Haliangium ochraceum
DSM 14365]
gi|262081700|gb|ACY17669.1| Exonuclease RNase T and DNA polymerase III [Haliangium ochraceum
DSM 14365]
Length = 187
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 28/66 (42%), Positives = 43/66 (65%), Gaps = 1/66 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
E +L+ M++W +HH ASGLT+RVRAS VS EA+ ++ F+ ++VK AP+ G H
Sbjct: 51 ESLLEQMDDWNRKHHGASGLTERVRASQVSEAEAEAQVLAFLREHVKQGAAPLAGNSIHQ 110
Query: 96 SKELLK 101
+ L+
Sbjct: 111 DRRFLR 116
>gi|348030375|ref|YP_004873061.1| oligoribonuclease [Glaciecola nitratireducens FR1064]
gi|347947718|gb|AEP31068.1| oligoribonuclease [Glaciecola nitratireducens FR1064]
Length = 185
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+Y + VL NM+EWC++ H +GLT+R RAS+ ++ A + F+ KYV +P+ G
Sbjct: 51 AVYQPDAVLDNMDEWCIKTHGGTGLTERCRASTYDVDSATQETISFLEKYVPKGKSPLCG 110
>gi|120555687|ref|YP_960038.1| oligoribonuclease [Marinobacter aquaeolei VT8]
gi|387815064|ref|YP_005430551.1| oligoribonuclease [Marinobacter hydrocarbonoclasticus ATCC 49840]
gi|166216266|sp|A1U4D2.1|ORN_MARAV RecName: Full=Oligoribonuclease
gi|120325536|gb|ABM19851.1| Exonuclease, RNase T and DNA polymerase III [Marinobacter aquaeolei
VT8]
gi|381340081|emb|CCG96128.1| oligoribonuclease [Marinobacter hydrocarbonoclasticus ATCC 49840]
Length = 180
Score = 57.4 bits (137), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 41/61 (67%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ + +L+ M+EWC H ASGLT RV+ S++S EA+++ +F+ K+++P +P+
Sbjct: 45 IAIHQPDSLLEQMDEWCTRTHGASGLTQRVKESTISEAEAEQQTLEFLGKHLEPGQSPLC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|148244280|ref|YP_001218974.1| oligoribonuclease [Candidatus Vesicomyosocius okutanii HA]
gi|146326107|dbj|BAF61250.1| oligoribonuclease [Candidatus Vesicomyosocius okutanii HA]
Length = 181
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ N+++L +MN+W EHH SGL RVR S+VS ++A+ +F+ KYV +PM G
Sbjct: 47 AIHQNDKILTSMNQWNTEHHTNSGLLKRVRKSNVSCKKAEIHTLKFLKKYVNKGASPMCG 106
>gi|156379361|ref|XP_001631426.1| predicted protein [Nematostella vectensis]
gi|156218466|gb|EDO39363.1| predicted protein [Nematostella vectensis]
Length = 171
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 41/69 (59%), Gaps = 1/69 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG- 91
++ ++VL M EWC H SGLT V+AS +S+++A+ + FV+++V P + P+ G
Sbjct: 34 IHQPDDVLDAMGEWCTRQHGESGLTAAVKASDISLQKAEDIMVGFVSQHVTPGSCPLAGN 93
Query: 92 EYHTSKELL 100
H K L
Sbjct: 94 SVHADKRFL 102
>gi|255319398|ref|ZP_05360614.1| oligoribonuclease [Acinetobacter radioresistens SK82]
gi|262380862|ref|ZP_06074013.1| oligoribonuclease [Acinetobacter radioresistens SH164]
gi|421466191|ref|ZP_15914875.1| oligoribonuclease [Acinetobacter radioresistens WC-A-157]
gi|421857217|ref|ZP_16289570.1| oligoribonuclease [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
gi|255303534|gb|EET82735.1| oligoribonuclease [Acinetobacter radioresistens SK82]
gi|262297497|gb|EEY85415.1| oligoribonuclease [Acinetobacter radioresistens SH164]
gi|400203463|gb|EJO34451.1| oligoribonuclease [Acinetobacter radioresistens WC-A-157]
gi|403187348|dbj|GAB75771.1| oligoribonuclease [Acinetobacter radioresistens DSM 6976 = NBRC
102413]
Length = 187
Score = 56.6 bits (135), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +++VL M+EW H SGL RVR S+++ EA+++ F+ K+V PKT+PM
Sbjct: 47 LAIHQSDQVLNAMDEWNTRQHGQSGLIQRVRRSTLTALEAEQQTIDFLKKWVNPKTSPMC 106
Query: 91 G 91
G
Sbjct: 107 G 107
>gi|47223800|emb|CAF98570.1| unnamed protein product [Tetraodon nigroviridis]
Length = 248
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+E+L M+EWC EHH SGLT VR S +++E+A+ FV ++ P P+ G
Sbjct: 50 DELLDGMSEWCKEHHGKSGLTQAVRNSKITLEQAEYEFLSFVRQHTPPGQCPLAG 104
>gi|392548784|ref|ZP_10295921.1| oligoribonuclease [Pseudoalteromonas rubra ATCC 29570]
Length = 181
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L NM+EWC H SGLT R +ASS S +A K+ F+ ++V P +PM G
Sbjct: 47 AIHQSDELLDNMDEWCTNQHGRSGLTARCKASSHSESDAIKQTLDFLKQWVPPGKSPMCG 106
>gi|114564478|ref|YP_751992.1| oligoribonuclease [Shewanella frigidimarina NCIMB 400]
gi|122298754|sp|Q07XW1.1|ORN_SHEFN RecName: Full=Oligoribonuclease
gi|114335771|gb|ABI73153.1| Exonuclease, RNase T and DNA polymerase III [Shewanella
frigidimarina NCIMB 400]
Length = 181
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+Y +EVL M++W +HH SGL DRVRAS S ++A + F+A+YV +PM G
Sbjct: 47 AIYQTDEVLAGMDDWNQKHHGESGLVDRVRASKCSEQDAIAQTIDFLAQYVPKGASPMCG 106
>gi|321470748|gb|EFX81723.1| hypothetical protein DAPPUDRAFT_92597 [Daphnia pulex]
Length = 185
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ +L M EWC + H SGLT+ R S++S+EEA ++L F+ +Y P P+ G
Sbjct: 56 DSILDGMGEWCKKTHGESGLTEACRNSNISVEEAQEQLVDFIGRYTNPGECPLAG 110
>gi|451982317|ref|ZP_21930635.1| oligoribonuclease [Nitrospina gracilis 3/211]
gi|451760482|emb|CCQ91919.1| oligoribonuclease [Nitrospina gracilis 3/211]
Length = 193
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 46/66 (69%), Gaps = 1/66 (1%)
Query: 26 QGTCKCGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK 85
+G C ++ ++ +L+ M++W + H+ASGL +V+ S++++EEA++R F+ +YV K
Sbjct: 43 EGPCLV-IHQDDAILERMDDWNQKTHSASGLIQKVKESTLTVEEAEQRTLDFIKQYVPYK 101
Query: 86 TAPMVG 91
T+P+ G
Sbjct: 102 TSPLCG 107
>gi|121997034|ref|YP_001001821.1| oligoribonuclease [Halorhodospira halophila SL1]
gi|166216263|sp|A1WTK7.1|ORN_HALHL RecName: Full=Oligoribonuclease
gi|121588439|gb|ABM61019.1| Exonuclease, RNase T and DNA polymerase III [Halorhodospira
halophila SL1]
Length = 183
Score = 56.2 bits (134), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + +L +M+EW H SGLT+RVRAS+V+ EA+ ++ F+ +YV +T+PM G
Sbjct: 47 AIHQDRSLLDSMDEWNTRQHGRSGLTERVRASTVTEAEAEAQVLAFLKQYVPARTSPMCG 106
>gi|413958554|ref|ZP_11397793.1| oligoribonuclease [Burkholderia sp. SJ98]
gi|413941134|gb|EKS73094.1| oligoribonuclease [Burkholderia sp. SJ98]
Length = 202
Score = 56.2 bits (134), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ EE L M+EW H SGLT+RV+AS+V EA +++ F+ YV P +PM G
Sbjct: 61 AIHQTEEALGRMDEWNRNTHGRSGLTERVKASTVDEAEATRQIRDFLGAYVPPGKSPMCG 120
>gi|345871099|ref|ZP_08823047.1| Oligoribonuclease [Thiorhodococcus drewsii AZ1]
gi|343920933|gb|EGV31660.1| Oligoribonuclease [Thiorhodococcus drewsii AZ1]
Length = 182
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E +L M++W EHH ASGL DRVRAS V+ +A+ F+A YV +P+ G
Sbjct: 47 AIHQDEAILSGMDDWNCEHHGASGLLDRVRASHVTEGQAEAATLAFLAHYVPAGASPLCG 106
>gi|407938069|ref|YP_006853710.1| oligoribonuclease [Acidovorax sp. KKS102]
gi|407895863|gb|AFU45072.1| oligoribonuclease [Acidovorax sp. KKS102]
Length = 200
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 41/60 (68%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+ W H SGL D+V+AS+V+ EEA++++ F+A+YV TAPM G
Sbjct: 61 AIHQSDELLNKMDAWNKGTHGRSGLIDKVKASTVTEEEAEQKILAFLAQYVPKGTAPMCG 120
>gi|21355135|ref|NP_651184.1| CG10214 [Drosophila melanogaster]
gi|11133808|sp|Q9VCI0.1|ORN_DROME RecName: Full=Probable oligoribonuclease
gi|7301049|gb|AAF56185.1| CG10214 [Drosophila melanogaster]
gi|16769160|gb|AAL28799.1| LD18757p [Drosophila melanogaster]
gi|220942706|gb|ACL83896.1| CG10214-PA [synthetic construct]
gi|220952944|gb|ACL89015.1| CG10214-PA [synthetic construct]
Length = 211
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 44/69 (63%), Gaps = 1/69 (1%)
Query: 23 LQTQGTCKCGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV 82
++++G C + + +EV +MNEWC++HH SGL DR ++S V++EEA + ++ K +
Sbjct: 69 VKSEGPC-FAINHPQEVYDSMNEWCMKHHYNSGLIDRCKSSDVNLEEASNLVLSYLEKNI 127
Query: 83 KPKTAPMVG 91
+ P+ G
Sbjct: 128 PKRACPLGG 136
>gi|218778072|ref|YP_002429390.1| exonuclease RNase T and DNA polymerase III [Desulfatibacillum
alkenivorans AK-01]
gi|218759456|gb|ACL01922.1| Exonuclease RNase T and DNA polymerase III [Desulfatibacillum
alkenivorans AK-01]
Length = 175
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 49/98 (50%), Gaps = 11/98 (11%)
Query: 1 MDNIGNRPSNTALSSMEQVKAYLQTQGTC-------KCGLYYNEEVLQNMNEWCVEHHNA 53
M+ G P N+ + + A L T G + +++ VL+N++ W ++ H A
Sbjct: 6 MEMTGLNPDNSVIVEI----ATLITDGDLNLVAEGPELAIFHPPHVLENIDPWSLDQHTA 61
Query: 54 SGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
SGL DRV+AS V +A+K F+ +Y K P+ G
Sbjct: 62 SGLLDRVKASDVDTAQAEKLTLDFIKEYCAEKECPLAG 99
>gi|443696841|gb|ELT97456.1| hypothetical protein CAPTEDRAFT_221441 [Capitella teleta]
Length = 190
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVGE 92
++ E+VL +M+EWC EHH SGLT VR S VSI +A+ + +FV ++ P+ G
Sbjct: 49 IHQAEDVLASMDEWCTEHHAKSGLTQAVRDSKVSIVDAEDMMLRFVEEHTPCGKCPLAGN 108
Query: 93 -YHTSKELL 100
H K L
Sbjct: 109 TVHMDKRFL 117
>gi|170696330|ref|ZP_02887460.1| Exonuclease RNase T and DNA polymerase III [Burkholderia graminis
C4D1M]
gi|170138736|gb|EDT06934.1| Exonuclease RNase T and DNA polymerase III [Burkholderia graminis
C4D1M]
Length = 203
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 39/60 (65%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRV+AS+VS EA +++ F+A+YV P +PM G
Sbjct: 59 AIHQSDETLAKMDQWNQNTHGRSGLIDRVKASTVSEIEATEQIRAFLAQYVPPGKSPMCG 118
>gi|307110015|gb|EFN58252.1| hypothetical protein CHLNCDRAFT_12089, partial [Chlorella
variabilis]
Length = 171
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 24/48 (50%), Positives = 34/48 (70%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVA 79
++ EEVLQ MNEWCVE H SGLT R S+ S+ EA++++ +F+A
Sbjct: 47 AIHQPEEVLQTMNEWCVEQHGKSGLTQACRDSTTSLAEAEQQVLEFIA 94
>gi|229366424|gb|ACQ58192.1| Oligoribonuclease, mitochondrial precursor [Anoplopoma fimbria]
Length = 266
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 38 EVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHTS 96
E+L+ M+EWC EHH SGLT V+ S +++E+A+ FV ++ P P+ G H
Sbjct: 119 ELLEGMSEWCKEHHGKSGLTQAVQDSKITLEQAEYEFLSFVRQHTPPGQCPLAGNSVHAD 178
Query: 97 KELL 100
K L
Sbjct: 179 KRFL 182
>gi|430377331|ref|ZP_19431464.1| oligoribonuclease [Moraxella macacae 0408225]
gi|429540468|gb|ELA08497.1| oligoribonuclease [Moraxella macacae 0408225]
Length = 183
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+Y + VL M++W HN SGL DR+R S+V++E A F+AKYV+ +PM G
Sbjct: 47 AIYTPDIVLNAMDDWNTRQHNQSGLVDRIRRSTVTLEHAQDATIGFLAKYVEAGKSPMCG 106
>gi|367011319|ref|XP_003680160.1| hypothetical protein TDEL_0C00600 [Torulaspora delbrueckii]
gi|359747819|emb|CCE90949.1| hypothetical protein TDEL_0C00600 [Torulaspora delbrueckii]
Length = 250
Score = 55.8 bits (133), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 35/50 (70%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV 82
++ + VL MNEWC+EHH ASGLT +V S+ + E+ ++ L QF+ +YV
Sbjct: 75 IHCDRSVLDGMNEWCIEHHGASGLTKKVLESTKTKEQVEQELLQFIKRYV 124
>gi|372270431|ref|ZP_09506479.1| oligoribonuclease [Marinobacterium stanieri S30]
Length = 180
Score = 55.8 bits (133), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ + VL +M EWC H SGLTDRVRAS +S EA++++ F+ ++ + +PM
Sbjct: 45 IAVHQADTVLSHMGEWCTRQHGQSGLTDRVRASKISETEAEQQMLAFLRQHSEKGVSPMC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|406946618|gb|EKD77762.1| hypothetical protein ACD_42C00190G0002 [uncultured bacterium]
Length = 181
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ L M++WC E H SGLT RV+ S+++ EA+ ++ +F+ KY K +P+ G
Sbjct: 48 AIHQEQQYLNQMDKWCTEQHGKSGLTQRVQQSTITESEAETKILEFIKKYAPEKASPLCG 107
>gi|209522085|ref|ZP_03270737.1| Exonuclease RNase T and DNA polymerase III [Burkholderia sp. H160]
gi|209497475|gb|EDZ97678.1| Exonuclease RNase T and DNA polymerase III [Burkholderia sp. H160]
Length = 251
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M+EW H SGL DRV+AS+VS +A ++ +F+ +YV P +PM G
Sbjct: 107 AIHQSDETLAKMDEWNQNTHGRSGLIDRVKASTVSEADATAQIREFLGQYVPPGKSPMCG 166
>gi|328792689|ref|XP_001121548.2| PREDICTED: probable oligoribonuclease-like [Apis mellifera]
Length = 197
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 36/55 (65%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+E+L NMN+WC+ H +GL R S ++I++A++ L +++ YVK T P+ G
Sbjct: 60 DEILNNMNDWCLATHQKTGLIHESRLSKITIQDAEQILLKYLKTYVKEATCPLAG 114
>gi|358012643|ref|ZP_09144453.1| oligoribonuclease [Acinetobacter sp. P8-3-8]
Length = 185
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 41/61 (67%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++ +L M+EW + H SGL +RVR S ++ ++A+++ +F+ K+V PKT+PM
Sbjct: 47 LAVHQSDLILNAMDEWNTKQHGQSGLIERVRRSKLTAQDAEQQTIEFLKKWVNPKTSPMC 106
Query: 91 G 91
G
Sbjct: 107 G 107
>gi|238020295|ref|ZP_04600721.1| hypothetical protein GCWU000324_00173 [Kingella oralis ATCC 51147]
gi|237867275|gb|EEP68281.1| hypothetical protein GCWU000324_00173 [Kingella oralis ATCC 51147]
Length = 192
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 40/60 (66%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E++ NM+EWC H +GLT RV+ASS + E +++L F+ +++ K +PM G
Sbjct: 46 AIHQSDEIMDNMDEWCTTTHARTGLTARVKASSYNEAEVEQKLLDFMGEWLPAKASPMCG 105
>gi|350544108|ref|ZP_08913761.1| 3'-to-5' oligoribonuclease (orn) [Candidatus Burkholderia kirkii
UZHbot1]
gi|350528106|emb|CCD36488.1| 3'-to-5' oligoribonuclease (orn) [Candidatus Burkholderia kirkii
UZHbot1]
Length = 246
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M+EW H SGLT+RV+AS+V+ EA +++ F+ +YV P +PM G
Sbjct: 104 AIHQSDETLVRMDEWNRNTHGRSGLTERVKASTVNEAEATRQIRDFLGQYVPPGKSPMCG 163
>gi|332305263|ref|YP_004433114.1| Exonuclease RNase T and DNA polymerase III [Glaciecola sp.
4H-3-7+YE-5]
gi|410642419|ref|ZP_11352931.1| oligoribonuclease [Glaciecola chathamensis S18K6]
gi|410644598|ref|ZP_11355074.1| oligoribonuclease [Glaciecola agarilytica NO2]
gi|332172592|gb|AEE21846.1| Exonuclease RNase T and DNA polymerase III [Glaciecola sp.
4H-3-7+YE-5]
gi|410135772|dbj|GAC03473.1| oligoribonuclease [Glaciecola agarilytica NO2]
gi|410138091|dbj|GAC11118.1| oligoribonuclease [Glaciecola chathamensis S18K6]
Length = 181
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++EVL NMN+WC++ H SGLT+R R S++ + A +F+ KYV +P+ G
Sbjct: 47 AIHQSDEVLNNMNQWCIDTHGKSGLTERCRKSTIDEQTAVAETIRFLEKYVPKGASPLCG 106
>gi|290998255|ref|XP_002681696.1| predicted protein [Naegleria gruberi]
gi|284095321|gb|EFC48952.1| predicted protein [Naegleria gruberi]
Length = 185
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKP-KTAPMVG 91
++ ++ VL NMN+WC +HH SGLT VR SS SI++ + + FV YV + AP+ G
Sbjct: 50 VHQSDSVLDNMNDWCKQHHGDSGLTAAVRKSSFSIQQVEDTVLDFVKHYVASERLAPLAG 109
>gi|183985996|gb|AAI66309.1| LOC100158598 protein [Xenopus (Silurana) tropicalis]
Length = 273
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L M++WC EHH SGLT VR S +++++A+ F+ ++ P P+ G H
Sbjct: 119 DELLDGMSDWCKEHHGKSGLTQAVRESKITLQQAEYEFLSFIRQHTPPGVCPLAGNSVHA 178
Query: 96 SKELL 100
K+ L
Sbjct: 179 DKKFL 183
>gi|56270497|gb|AAH87528.1| LOC496097 protein, partial [Xenopus laevis]
Length = 223
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L M++WC EHH SGLT VR S +++++A+ F+ ++ P P+ G H
Sbjct: 90 DELLDGMSDWCKEHHGKSGLTQAVRESRITLQQAEYEFLSFIRQHTPPGVCPLAGNSVHA 149
Query: 96 SKELL 100
K+ L
Sbjct: 150 DKKFL 154
>gi|399155210|ref|ZP_10755277.1| oligoribonuclease, partial [gamma proteobacterium SCGC AAA007-O20]
Length = 125
Score = 55.5 bits (132), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 24/52 (46%), Positives = 32/52 (61%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L +M+EW H SGL RV+ S +S+ A+K+ FV KYV P T+PM G
Sbjct: 54 LDSMDEWNTRQHTKSGLVQRVKESEISVNAAEKQTLDFVMKYVDPGTSPMCG 105
>gi|377821398|ref|YP_004977769.1| Exonuclease RNase T and DNA polymerase III [Burkholderia sp. YI23]
gi|357936233|gb|AET89792.1| Exonuclease RNase T and DNA polymerase III [Burkholderia sp. YI23]
Length = 200
Score = 55.5 bits (132), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E L M+EW H SGLT+RV+AS+V EA +++ F+ +YV P +PM G
Sbjct: 61 AIHQTDEALGRMDEWNRNTHGRSGLTERVKASTVDEAEATRQIRDFLGQYVPPGKSPMCG 120
>gi|262374198|ref|ZP_06067474.1| oligoribonuclease [Acinetobacter junii SH205]
gi|262310756|gb|EEY91844.1| oligoribonuclease [Acinetobacter junii SH205]
Length = 184
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 41/61 (67%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++ +L M+EW + H SGL +RVR S +S ++A+++ +F+ K+V PK++PM
Sbjct: 47 LAVHQSDLILNAMDEWNTKQHGQSGLIERVRRSKLSAQDAEQQTLEFLKKWVNPKSSPMC 106
Query: 91 G 91
G
Sbjct: 107 G 107
>gi|88812805|ref|ZP_01128050.1| oligoribonuclease [Nitrococcus mobilis Nb-231]
gi|88789875|gb|EAR20997.1| oligoribonuclease [Nitrococcus mobilis Nb-231]
Length = 185
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E VL M++W E H +SGL +RVR S + +A++R QF+ ++V P +PM G
Sbjct: 47 AIHQSETVLAAMDKWNTEQHGSSGLVERVRQSRIDEAQAEQRTLQFLQQWVPPNASPMCG 106
>gi|119897809|ref|YP_933022.1| oligoribonuclease [Azoarcus sp. BH72]
gi|166215750|sp|A1K5N0.1|ORN_AZOSB RecName: Full=Oligoribonuclease
gi|119670222|emb|CAL94135.1| oligoribonuclease [Azoarcus sp. BH72]
Length = 182
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 26/61 (42%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ E VL M++W H SGL DRVRAS+VS EA+ R+ F+ ++V +T+PM
Sbjct: 46 IAVHQPESVLDAMDDWNKNTHGKSGLIDRVRASTVSEAEAEARMLAFLQEWVPARTSPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|365092215|ref|ZP_09329363.1| oligoribonuclease [Acidovorax sp. NO-1]
gi|363415339|gb|EHL22466.1| oligoribonuclease [Acidovorax sp. NO-1]
Length = 192
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 41/60 (68%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+ W H SGL D+V+AS+V+ EEA++++ F++KYV TAPM G
Sbjct: 58 AIHQSDELLGKMDAWNKGTHGRSGLIDKVKASTVTEEEAEQQIIAFLSKYVPKGTAPMCG 117
>gi|345317303|ref|XP_001514027.2| PREDICTED: oligoribonuclease, mitochondrial-like [Ornithorhynchus
anatinus]
Length = 238
Score = 55.1 bits (131), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M+EWC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 88 DELLDSMSEWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 147
Query: 96 SKELL 100
K+ L
Sbjct: 148 DKKFL 152
>gi|395520254|ref|XP_003764250.1| PREDICTED: oligoribonuclease, mitochondrial [Sarcophilus harrisii]
Length = 236
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M+EWC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 86 DELLDSMSEWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 145
Query: 96 SKELL 100
K+ L
Sbjct: 146 DKKFL 150
>gi|406978912|gb|EKE00785.1| hypothetical protein ACD_21C00273G0002 [uncultured bacterium]
Length = 181
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 40/60 (66%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+++ + VL M++WC + H +SGLT+RV+ S +S+ +A+K +F+ K+V +PM G
Sbjct: 45 AIHHADSVLAKMDDWCTKQHGSSGLTERVKKSKISVAKAEKLTLEFLHKHVAIGKSPMCG 104
>gi|307544322|ref|YP_003896801.1| oligoribonuclease [Halomonas elongata DSM 2581]
gi|307216346|emb|CBV41616.1| oligoribonuclease [Halomonas elongata DSM 2581]
Length = 197
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 44/72 (61%), Gaps = 1/72 (1%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ + +L+ M++W + H SGLT+RVRAS++ EA++R F+ ++V P T+PM
Sbjct: 53 LAVHQPDALLEAMDDWNQKTHGGSGLTERVRASAIDTAEAERRTLAFLHEHVAPGTSPMC 112
Query: 91 G-EYHTSKELLK 101
G H + L+
Sbjct: 113 GNSVHQDRRFLE 124
>gi|346464579|gb|AEO32134.1| hypothetical protein [Amblyomma maculatum]
Length = 148
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 26/70 (37%), Positives = 38/70 (54%), Gaps = 1/70 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVGE 92
L+ ++VL M EWC EHH SGLT R S ++++EA+ +L V V P P+ G
Sbjct: 42 LHQPDDVLDRMGEWCKEHHGKSGLTQACRESRLTLKEAEDQLCSHVGGLVVPGQCPLAGS 101
Query: 93 -YHTSKELLK 101
H + L+
Sbjct: 102 TVHMDRRFLR 111
>gi|148225871|ref|NP_001088822.1| REX2, RNA exonuclease 2 homolog [Xenopus laevis]
gi|126631799|gb|AAI33811.1| LOC496097 protein [Xenopus laevis]
Length = 186
Score = 55.1 bits (131), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L M++WC EHH SGLT VR S +++++A+ F+ ++ P P+ G H
Sbjct: 53 DELLDGMSDWCKEHHGKSGLTQAVRESRITLQQAEYEFLSFIRQHTPPGVCPLAGNSVHA 112
Query: 96 SKELL 100
K+ L
Sbjct: 113 DKKFL 117
>gi|302848573|ref|XP_002955818.1| hypothetical protein VOLCADRAFT_66302 [Volvox carteri f.
nagariensis]
gi|300258786|gb|EFJ43019.1| hypothetical protein VOLCADRAFT_66302 [Volvox carteri f.
nagariensis]
Length = 196
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +++VL NMN WC EHH SGLT RVR + V++ +A+ L F++ + A + G
Sbjct: 58 AIHADDDVLDNMNAWCKEHHGKSGLTQRVRETHVTMAQAEDELLAFISGHTTENMAQLAG 117
>gi|334329798|ref|XP_001381185.2| PREDICTED: oligoribonuclease, mitochondrial-like [Monodelphis
domestica]
Length = 236
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M+EWC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 86 DELLDSMSEWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 145
Query: 96 SKELL 100
K+ L
Sbjct: 146 DKKFL 150
>gi|50760099|ref|XP_417900.1| PREDICTED: oligoribonuclease, mitochondrial [Gallus gallus]
Length = 233
Score = 54.7 bits (130), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M+EWC EHH SGLT V+ S +S+++A+ FV + P P+ G H
Sbjct: 83 DELLDSMSEWCKEHHGKSGLTKAVKESKISLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 142
Query: 96 SKELL 100
K+ L
Sbjct: 143 DKKFL 147
>gi|389703148|ref|ZP_10185442.1| oligoribonuclease [Acinetobacter sp. HA]
gi|388611551|gb|EIM40651.1| oligoribonuclease [Acinetobacter sp. HA]
Length = 184
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++ VL M+EW H SGL +RVR S ++ ++A+++ +F+ K+V PK +PM
Sbjct: 47 LAVHQSDRVLNAMDEWNTRQHGQSGLVERVRRSKLTAQDAEQQTIEFLKKWVNPKVSPMC 106
Query: 91 G 91
G
Sbjct: 107 G 107
>gi|326933351|ref|XP_003212769.1| PREDICTED: oligoribonuclease, mitochondrial-like [Meleagris
gallopavo]
Length = 173
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L M+EWC EHH SGLT V+ S +S+++A+ FV + P P+ G H
Sbjct: 23 DELLDGMSEWCKEHHGKSGLTKAVKESKISLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 82
Query: 96 SKELL 100
K+ L
Sbjct: 83 DKKFL 87
>gi|225717126|gb|ACO14409.1| Oligoribonuclease, mitochondrial precursor [Esox lucius]
Length = 207
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L M++WC EHH SGLT VR S +++++A+ F+ ++ P P+ G H
Sbjct: 58 DELLDGMDDWCKEHHGNSGLTQAVRNSKITLQQAEYEFLSFIRQHTPPGQCPLAGNSVHA 117
Query: 96 SKELL 100
K+ L
Sbjct: 118 DKKFL 122
>gi|449267375|gb|EMC78320.1| Oligoribonuclease, mitochondrial, partial [Columba livia]
Length = 184
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 37/65 (56%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L M+EWC EHH SGLT V+ S +S+++A+ FV + P P+ G H
Sbjct: 34 DELLDGMSEWCKEHHGKSGLTKAVKESKISLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 93
Query: 96 SKELL 100
K+ L
Sbjct: 94 DKKFL 98
>gi|323303994|gb|EGA57774.1| Rex2p [Saccharomyces cerevisiae FostersB]
Length = 186
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK 85
++Y EV+ MNEWC+EHH SGLT +V AS ++ + + L +++ +Y+ K
Sbjct: 102 IHYGPEVMNKMNEWCIEHHGNSGLTAKVLASEKTLAQVEDELLEYIQRYIPDK 154
>gi|424903388|ref|ZP_18326901.1| oligoribonuclease [Burkholderia thailandensis MSMB43]
gi|390931261|gb|EIP88662.1| oligoribonuclease [Burkholderia thailandensis MSMB43]
Length = 203
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRVRASSV+ +A ++ F+ +YV P +PM G
Sbjct: 61 AIHQSDETLAKMDDWNKNTHGRSGLIDRVRASSVTEADAAAQIEAFLGQYVPPGKSPMCG 120
>gi|167581087|ref|ZP_02373961.1| oligoribonuclease [Burkholderia thailandensis TXDOH]
Length = 201
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRVRASSV+ +A ++ F+ +YV P +PM G
Sbjct: 59 AIHQSDETLAKMDDWNKNTHGRSGLIDRVRASSVTEADAAAQIEAFLGQYVPPGKSPMCG 118
>gi|392540394|ref|ZP_10287531.1| oligoribonuclease [Pseudoalteromonas piscicida JCM 20779]
Length = 181
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L NM+EWC H SGLT R +AS + +A K+ F+ ++V P +PM
Sbjct: 46 VAIHQSDELLDNMDEWCTNQHGRSGLTARCKASQFTEADAVKQTLDFLKEWVPPGASPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|167837413|ref|ZP_02464296.1| oligoribonuclease [Burkholderia thailandensis MSMB43]
Length = 201
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRVRASSV+ +A ++ F+ +YV P +PM G
Sbjct: 59 AIHQSDETLAKMDDWNKNTHGRSGLIDRVRASSVTEADAAAQIEAFLGQYVPPGKSPMCG 118
>gi|357630731|gb|EHJ78664.1| oligoribonuclease, mitochondrial [Danaus plexippus]
Length = 194
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++EVL NMN+WCV H SGLT+ R S +++ +A+ + FV +V K P+ G
Sbjct: 56 IHQDDEVLNNMNQWCVTQHGESGLTEACRKSQITLTKAENDILNFVKSHVPEKLCPLGG 114
>gi|410628667|ref|ZP_11339385.1| oligoribonuclease [Glaciecola mesophila KMM 241]
gi|410151671|dbj|GAC26154.1| oligoribonuclease [Glaciecola mesophila KMM 241]
Length = 181
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +++VL NMN+WC++ H SGLT+R R S+V + A +F+ KYV +P+ G
Sbjct: 47 AIHQSDDVLNNMNQWCIDTHGKSGLTERCRKSTVDEQTAVAETIRFLEKYVPKGASPLCG 106
>gi|409202547|ref|ZP_11230750.1| oligoribonuclease [Pseudoalteromonas flavipulchra JG1]
Length = 181
Score = 54.7 bits (130), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L NM+EWC H SGLT R +AS + +A K+ F+ ++V P +PM
Sbjct: 46 VAIHQSDELLDNMDEWCTNQHGRSGLTARCKASKFTEADAVKQTLDFLKEWVPPGASPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|402759179|ref|ZP_10861435.1| oligoribonuclease [Acinetobacter sp. NCTC 7422]
Length = 186
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 40/61 (65%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++ +L M+EW + H SGL +RVR S + E+A+++ +F+ K+V PK++PM
Sbjct: 47 LAVHQSDLILNAMDEWNTKQHGQSGLIERVRRSKLKAEDAEQQTLEFLKKWVSPKSSPMC 106
Query: 91 G 91
G
Sbjct: 107 G 107
>gi|323308092|gb|EGA61345.1| Rex2p [Saccharomyces cerevisiae FostersO]
Length = 229
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK 85
++Y EV+ MNEWC+EHH SGLT +V AS ++ + + L +++ +Y+ K
Sbjct: 62 IHYGPEVMNKMNEWCIEHHGNSGLTAKVLASEKTLAQVEDELLEYIQRYIPDK 114
>gi|256271847|gb|EEU06877.1| Rex2p [Saccharomyces cerevisiae JAY291]
Length = 269
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK 85
++Y EV+ MNEWC+EHH SGLT +V AS ++ + + L +++ +Y+ K
Sbjct: 102 IHYGPEVMNKMNEWCIEHHGNSGLTAKVLASEKTLAQVEDELLEYIQRYIPDK 154
>gi|158284602|ref|XP_307582.4| Anopheles gambiae str. PEST AGAP012804-PA [Anopheles gambiae str.
PEST]
gi|157020970|gb|EAA03378.5| AGAP012804-PA [Anopheles gambiae str. PEST]
Length = 228
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ VL MN WC +HH+ SGL + V+ S+ S+++A++ + FV KY + PM G
Sbjct: 90 DAVLAGMNSWCKDHHSKSGLIEAVKKSTYSVDQAERDVLDFVKKYCPERKCPMAG 144
>gi|365764342|gb|EHN05866.1| Rex2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 269
Score = 54.7 bits (130), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK 85
++Y EV+ MNEWC+EHH SGLT +V AS ++ + + L +++ +Y+ K
Sbjct: 102 IHYGPEVMDKMNEWCIEHHGNSGLTAKVLASEKTLAQVEDELLEYIQRYIPDK 154
>gi|323491900|ref|ZP_08097072.1| oligoribonuclease [Vibrio brasiliensis LMG 20546]
gi|323313843|gb|EGA66935.1| oligoribonuclease [Vibrio brasiliensis LMG 20546]
Length = 181
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ EE LQ M+EWC H SGL DR+R S + +EA ++ +F+ K+V +P+
Sbjct: 46 LAIHQPEEELQKMDEWCTTTHTGSGLVDRIRESKIDEQEAIRQTIEFLEKWVPKGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|209731072|gb|ACI66405.1| Oligoribonuclease, mitochondrial precursor [Salmo salar]
Length = 207
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 1/64 (1%)
Query: 38 EVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHTS 96
E+L M++WC EHH SGLT VR S +S+++A+ F+ ++ P P+ G H
Sbjct: 59 ELLDGMDDWCKEHHGNSGLTQAVRDSKISLQQAEYEFLSFIRQHTPPGHCPLAGNSVHAD 118
Query: 97 KELL 100
K+ L
Sbjct: 119 KKFL 122
>gi|190406098|gb|EDV09365.1| RNA exonuclease [Saccharomyces cerevisiae RM11-1a]
Length = 269
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK 85
++Y EV+ MNEWC+EHH SGLT +V AS ++ + + L +++ +Y+ K
Sbjct: 102 IHYGPEVMNKMNEWCIEHHGNSGLTAKVLASEKTLAQVEDELLEYIQRYIPDK 154
>gi|392297576|gb|EIW08675.1| Rex2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 269
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK 85
++Y EV+ MNEWC+EHH SGLT +V AS ++ + + L +++ +Y+ K
Sbjct: 102 IHYGPEVMNKMNEWCIEHHGNSGLTAKVLASEKTLAQVEDELLEYIQRYIPDK 154
>gi|6323088|ref|NP_013160.1| Rex2p [Saccharomyces cerevisiae S288c]
gi|1730818|sp|P54964.1|ORN_YEAST RecName: Full=Oligoribonuclease, mitochondrial; Flags: Precursor
gi|1181280|emb|CAA64306.1| Ynt20 protein [Saccharomyces cerevisiae]
gi|1360404|emb|CAA97590.1| YNT20 [Saccharomyces cerevisiae]
gi|285813481|tpg|DAA09377.1| TPA: Rex2p [Saccharomyces cerevisiae S288c]
Length = 269
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK 85
++Y EV+ MNEWC+EHH SGLT +V AS ++ + + L +++ +Y+ K
Sbjct: 102 IHYGPEVMNKMNEWCIEHHGNSGLTAKVLASEKTLAQVEDELLEYIQRYIPDK 154
>gi|323332512|gb|EGA73920.1| Rex2p [Saccharomyces cerevisiae AWRI796]
Length = 208
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++Y EV+ MNEWC+EHH SGLT +V AS ++ + + L +++ +Y+ K ++
Sbjct: 41 IHYGPEVMNKMNEWCIEHHGNSGLTAKVLASEKTLAQVEDELLEYIQRYIPDKNVGVLA 99
>gi|320163436|gb|EFW40335.1| REXO2 protein [Capsaspora owczarzaki ATCC 30864]
Length = 180
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 38/68 (55%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVGE 92
++ +EVL MN+WC EHH ASGLT VRAS+ S+ EA++ + FV ++
Sbjct: 48 IHQPDEVLDRMNDWCKEHHGASGLTAAVRASTTSLAEAEEVMLAFVREHTSKGCVLAGNT 107
Query: 93 YHTSKELL 100
H K L
Sbjct: 108 IHMDKRFL 115
>gi|151941228|gb|EDN59606.1| RNA exonuclease [Saccharomyces cerevisiae YJM789]
gi|259148048|emb|CAY81297.1| Rex2p [Saccharomyces cerevisiae EC1118]
Length = 269
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK 85
++Y EV+ MNEWC+EHH SGLT +V AS ++ + + L +++ +Y+ K
Sbjct: 102 IHYGPEVMNKMNEWCIEHHGNSGLTAKVLASEKTLAQVEDELLEYIQRYIPDK 154
>gi|51013461|gb|AAT93024.1| YLR059C [Saccharomyces cerevisiae]
Length = 269
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK 85
++Y EV+ MNEWC+EHH SGLT +V AS ++ + + L +++ +Y+ K
Sbjct: 102 IHYGPEVMNKMNEWCIEHHGNSGLTAKVLASEKTLAQVEDELLEYIQRYIPDK 154
>gi|323347541|gb|EGA81809.1| Rex2p [Saccharomyces cerevisiae Lalvin QA23]
Length = 217
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK 85
++Y EV+ MNEWC+EHH SGLT +V AS ++ + + L +++ +Y+ K
Sbjct: 102 IHYGPEVMNKMNEWCIEHHGNSGLTAKVLASEKTLAQVEDELLEYIQRYIPDK 154
>gi|262371112|ref|ZP_06064434.1| oligoribonuclease [Acinetobacter johnsonii SH046]
gi|381197813|ref|ZP_09905152.1| oligoribonuclease [Acinetobacter lwoffii WJ10621]
gi|262313998|gb|EEY95043.1| oligoribonuclease [Acinetobacter johnsonii SH046]
Length = 184
Score = 54.3 bits (129), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 37/55 (67%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ VL M+EW H SGL +RVR S ++ ++A+++ +F+ K+V PK++PM G
Sbjct: 53 DRVLNAMDEWNTRQHGQSGLIERVRRSKLTAQDAEQQTLEFLKKWVNPKSSPMCG 107
>gi|432896140|ref|XP_004076278.1| PREDICTED: oligoribonuclease, mitochondrial-like [Oryzias latipes]
Length = 274
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 39/66 (59%), Gaps = 1/66 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+++L M++WC EHH SGLT VR S +S+++A+ F+ ++ P P+ G H
Sbjct: 126 DKLLDEMSDWCKEHHGKSGLTQAVRESKISLQQAEYEFLSFIRQHTPPGQCPLAGNSVHA 185
Query: 96 SKELLK 101
K+ L+
Sbjct: 186 DKKFLE 191
>gi|407682309|ref|YP_006797483.1| oligoribonuclease [Alteromonas macleodii str. 'English Channel
673']
gi|407243920|gb|AFT73106.1| oligoribonuclease [Alteromonas macleodii str. 'English Channel
673']
Length = 181
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +++VL NM+EWC H SGLT R R S +S+EEA + F+ ++V +P+ G
Sbjct: 47 AVHQSDDVLNNMDEWCTRVHGESGLTARCRESKISVEEASAQTIAFLEQWVDAGKSPLCG 106
>gi|406595380|ref|YP_006746510.1| oligoribonuclease [Alteromonas macleodii ATCC 27126]
gi|407686229|ref|YP_006801402.1| oligoribonuclease [Alteromonas macleodii str. 'Balearic Sea AD45']
gi|407698703|ref|YP_006823490.1| oligoribonuclease [Alteromonas macleodii str. 'Black Sea 11']
gi|406372701|gb|AFS35956.1| oligoribonuclease [Alteromonas macleodii ATCC 27126]
gi|407247850|gb|AFT77035.1| oligoribonuclease [Alteromonas macleodii str. 'Black Sea 11']
gi|407289609|gb|AFT93921.1| oligoribonuclease [Alteromonas macleodii str. 'Balearic Sea AD45']
Length = 181
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +++VL NM+EWC H SGLT R R S +S+EEA + F+ ++V +P+ G
Sbjct: 47 AVHQSDDVLNNMDEWCTRVHGESGLTARCRESKISVEEASAQTIAFLEQWVDAGKSPLCG 106
>gi|410076152|ref|XP_003955658.1| hypothetical protein KAFR_0B02250 [Kazachstania africana CBS 2517]
gi|372462241|emb|CCF56523.1| hypothetical protein KAFR_0B02250 [Kazachstania africana CBS 2517]
Length = 337
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 35/56 (62%)
Query: 36 NEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ VL NMNEWC+EHH SGLT +V AS + E+ + L +V KY+ K ++
Sbjct: 101 DKSVLDNMNEWCIEHHGNSGLTAKVLASDKTKEQVETELLDYVKKYIPEKNTGILA 156
>gi|332139961|ref|YP_004425699.1| oligoribonuclease [Alteromonas macleodii str. 'Deep ecotype']
gi|410860152|ref|YP_006975386.1| oligoribonuclease [Alteromonas macleodii AltDE1]
gi|327549983|gb|AEA96701.1| oligoribonuclease [Alteromonas macleodii str. 'Deep ecotype']
gi|410817414|gb|AFV84031.1| oligoribonuclease [Alteromonas macleodii AltDE1]
Length = 181
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +++VL NM+EWC H SGLT R R S +S+EEA + F+ ++V +P+ G
Sbjct: 47 AVHQSDDVLNNMDEWCTRVHGESGLTARCRESKISVEEASAQTIAFLEQWVDAGKSPLCG 106
>gi|118790162|ref|XP_318057.3| AGAP004759-PA [Anopheles gambiae str. PEST]
gi|116122385|gb|EAA13240.3| AGAP004759-PA [Anopheles gambiae str. PEST]
Length = 191
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 35/55 (63%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ VL MN WC +HH+ SGL + V+ S+ S+++A++ + FV KY + PM G
Sbjct: 53 DAVLAGMNSWCKDHHSKSGLIEAVKKSTYSVDQAERDVLDFVKKYCPERKCPMAG 107
>gi|226952875|ref|ZP_03823339.1| oligoribonuclease [Acinetobacter sp. ATCC 27244]
gi|226836386|gb|EEH68769.1| oligoribonuclease [Acinetobacter sp. ATCC 27244]
Length = 186
Score = 54.3 bits (129), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 41/61 (67%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++ +L M+EW + H SGL +RVR S ++ ++A+++ +F+ K+V PK++PM
Sbjct: 47 LAVHQSDVILNAMDEWNTKQHGQSGLIERVRRSKLTAQDAEQQTLEFLKKWVNPKSSPMC 106
Query: 91 G 91
G
Sbjct: 107 G 107
>gi|380023640|ref|XP_003695624.1| PREDICTED: probable oligoribonuclease-like, partial [Apis florea]
Length = 179
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 40/59 (67%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+++++++L NMN+WC+ H +GL R S ++I++A++ L +++ YVK T P+ G
Sbjct: 51 IHHSDKILNNMNDWCLATHQKTGLIYESRLSKITIQDAEQILLKYLKTYVKEATCPLAG 109
>gi|294649278|ref|ZP_06726713.1| exoribonuclease II [Acinetobacter haemolyticus ATCC 19194]
gi|292824831|gb|EFF83599.1| exoribonuclease II [Acinetobacter haemolyticus ATCC 19194]
Length = 186
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 41/61 (67%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++ +L M+EW + H SGL +RVR S ++ ++A+++ +F+ K+V PK++PM
Sbjct: 47 LAVHQSDVILNAMDEWNTKQHGQSGLIERVRRSKLTAQDAEQQTLEFLKKWVNPKSSPMC 106
Query: 91 G 91
G
Sbjct: 107 G 107
>gi|432105728|gb|ELK31919.1| Oligoribonuclease, mitochondrial [Myotis davidii]
Length = 237
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S+V++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|375096572|ref|ZP_09742837.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
marina XMU15]
gi|374657305|gb|EHR52138.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
marina XMU15]
Length = 202
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ +E L NM + E H SGLT+ VR S+V+I+EA++R ++V +YV P+TAP+ G
Sbjct: 45 IHAGDEALANMPDVVREMHARSGLTEEVRRSTVTIDEAERRALEYVREYVPDPQTAPLAG 104
>gi|390952260|ref|YP_006416019.1| oligoribonuclease [Thiocystis violascens DSM 198]
gi|390428829|gb|AFL75894.1| oligoribonuclease (3'->5' exoribonuclease) [Thiocystis violascens
DSM 198]
Length = 182
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +++L M++W EHH ASGL +RVRAS VS EA+ F+A +V +P+ G
Sbjct: 47 AIHQTDDILGGMDDWNREHHGASGLLERVRASRVSETEAESATLDFLADFVPAGASPLCG 106
>gi|425743249|ref|ZP_18861338.1| oligoribonuclease [Acinetobacter baumannii WC-323]
gi|425494525|gb|EKU60725.1| oligoribonuclease [Acinetobacter baumannii WC-323]
Length = 196
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 41/61 (67%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++ +L M+EW + H SGL +RVR S ++ ++A+++ +F+ K+V PK++PM
Sbjct: 57 LAVHQSDLILNAMDEWNTKQHGQSGLIERVRRSKLTAQDAEQQTLEFLKKWVNPKSSPMC 116
Query: 91 G 91
G
Sbjct: 117 G 117
>gi|403053073|ref|ZP_10907557.1| oligoribonuclease [Acinetobacter bereziniae LMG 1003]
Length = 185
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 41/61 (67%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++ +L M+EW + H SGL +RVR S ++ ++A+++ +F+ K+V PK++PM
Sbjct: 47 LAVHQSDIILNAMDEWNTKQHGQSGLIERVRRSKLTAQDAEQQTLEFLKKWVSPKSSPMC 106
Query: 91 G 91
G
Sbjct: 107 G 107
>gi|109899782|ref|YP_663037.1| oligoribonuclease [Pseudoalteromonas atlantica T6c]
gi|122971629|sp|Q15Q55.1|ORN_PSEA6 RecName: Full=Oligoribonuclease
gi|109702063|gb|ABG41983.1| Exonuclease, RNase T and DNA polymerase III [Pseudoalteromonas
atlantica T6c]
Length = 181
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +++VL NMN+WC++ H SGLT+R R S+V + A +F+ KYV +P+
Sbjct: 46 LAIHQSDDVLNNMNQWCIDTHGKSGLTERSRKSTVDEQTAVAETIRFLEKYVPKGASPLC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|344341112|ref|ZP_08772034.1| Oligoribonuclease [Thiocapsa marina 5811]
gi|343798992|gb|EGV16944.1| Oligoribonuclease [Thiocapsa marina 5811]
Length = 182
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ E VL M+ W +HH SGL DRVRAS+ S+ +A+ +F+A V P +P+ G
Sbjct: 47 AIHQPEAVLAGMDAWNRDHHGRSGLLDRVRASTQSVSDAESATLRFLADVVPPGASPLCG 106
>gi|152985597|ref|YP_001350999.1| oligoribonuclease [Pseudomonas aeruginosa PA7]
gi|452880474|ref|ZP_21957444.1| oligoribonuclease [Pseudomonas aeruginosa VRFPA01]
gi|166216274|sp|A6VD64.1|ORN_PSEA7 RecName: Full=Oligoribonuclease
gi|150960755|gb|ABR82780.1| oligoribonuclease [Pseudomonas aeruginosa PA7]
gi|452183098|gb|EME10116.1| oligoribonuclease [Pseudomonas aeruginosa VRFPA01]
Length = 180
Score = 54.3 bits (129), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ EEVL M+EW H SGLT RVR S+VS+ EA+ + F+ ++V +++P+
Sbjct: 45 IAIHQPEEVLAGMDEWNTRQHGQSGLTQRVRESTVSMAEAEAQTLAFLEQWVPKRSSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|445425948|ref|ZP_21437448.1| oligoribonuclease [Acinetobacter sp. WC-743]
gi|444753126|gb|ELW77792.1| oligoribonuclease [Acinetobacter sp. WC-743]
Length = 185
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 41/61 (67%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++ +L M+EW + H SGL +RVR S ++ ++A+++ +F+ K+V PK++PM
Sbjct: 47 LAVHQSDIILNAMDEWNTKQHGQSGLIERVRRSKLTAQDAEQQTLEFLKKWVSPKSSPMC 106
Query: 91 G 91
G
Sbjct: 107 G 107
>gi|74196748|dbj|BAE43110.1| unnamed protein product [Mus musculus]
Length = 237
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S+V++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|27229283|ref|NP_077195.2| oligoribonuclease, mitochondrial precursor [Mus musculus]
gi|78100196|sp|Q9D8S4.2|ORN_MOUSE RecName: Full=Oligoribonuclease, mitochondrial; AltName: Full=RNA
exonuclease 2 homolog; AltName: Full=Small fragment
nuclease; Flags: Precursor
gi|26357838|dbj|BAB25219.2| unnamed protein product [Mus musculus]
gi|148693756|gb|EDL25703.1| REX2, RNA exonuclease 2 homolog (S. cerevisiae) [Mus musculus]
Length = 237
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S+V++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|149041576|gb|EDL95417.1| REX2, RNA exonuclease 2 homolog (S. cerevisiae), isoform CRA_a
[Rattus norvegicus]
Length = 254
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S+V++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|225435975|ref|XP_002271328.1| PREDICTED: oligoribonuclease [Vitis vinifera]
gi|296083947|emb|CBI24335.3| unnamed protein product [Vitis vinifera]
Length = 245
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 39/59 (66%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E L NM EWC HH+ASGLT +V S++S +EA+K++ +FV + V T + G
Sbjct: 106 IHQTKECLDNMGEWCQSHHSASGLTKKVLRSTISEQEAEKQVIEFVKRNVGTYTPLLAG 164
>gi|406038640|ref|ZP_11045995.1| oligoribonuclease [Acinetobacter ursingii DSM 16037 = CIP 107286]
Length = 183
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 39/61 (63%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ + +L M+EW H SGL +RVR S ++ ++A+++ +F+ K+V PK++PM
Sbjct: 47 LAVHQPDRILNAMDEWNTRQHGQSGLIERVRRSKLTAQDAEQQTLEFLKKWVSPKSSPMC 106
Query: 91 G 91
G
Sbjct: 107 G 107
>gi|357167539|ref|XP_003581212.1| PREDICTED: oligoribonuclease-like isoform 1 [Brachypodium
distachyon]
Length = 247
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 37/56 (66%)
Query: 36 NEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++E L +MNEWC HH ASGLT++V S +S +A+K++ FV +Y+ T + G
Sbjct: 111 SKECLDDMNEWCKIHHGASGLTEKVLQSDISEHDAEKQVLDFVRRYIGSATPLIAG 166
>gi|74152556|dbj|BAE42568.1| unnamed protein product [Mus musculus]
Length = 224
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S+V++++A+ FV + P P+ G H
Sbjct: 74 DELLDSMSDWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 133
Query: 96 SKELL 100
K+ L
Sbjct: 134 DKKFL 138
>gi|186475543|ref|YP_001857013.1| oligoribonuclease [Burkholderia phymatum STM815]
gi|184192002|gb|ACC69967.1| Exonuclease RNase T and DNA polymerase III [Burkholderia phymatum
STM815]
Length = 207
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRVRAS+V+ +A +R+ F+ ++V P +PM G
Sbjct: 58 AIHQSDETLGKMDDWNKNTHGRSGLIDRVRASTVTEADATERIRAFLGQHVPPGKSPMCG 117
>gi|56605730|ref|NP_001008327.1| oligoribonuclease, mitochondrial precursor [Rattus norvegicus]
gi|81910234|sp|Q5U1X1.1|ORN_RAT RecName: Full=Oligoribonuclease, mitochondrial; AltName: Full=RNA
exonuclease 2 homolog; AltName: Full=Small fragment
nuclease; Flags: Precursor
gi|55562847|gb|AAH86420.1| REX2, RNA exonuclease 2 homolog (S. cerevisiae) [Rattus norvegicus]
gi|149041578|gb|EDL95419.1| REX2, RNA exonuclease 2 homolog (S. cerevisiae), isoform CRA_c
[Rattus norvegicus]
Length = 237
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S+V++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|149041581|gb|EDL95422.1| REX2, RNA exonuclease 2 homolog (S. cerevisiae), isoform CRA_f
[Rattus norvegicus]
Length = 154
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVGEYHT 95
+E+L +M++WC EHH SGLT V+ S+V++++A+ FV + P P+ G+ +
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGKIQS 145
>gi|392310119|ref|ZP_10272653.1| oligoribonuclease [Pseudoalteromonas citrea NCIMB 1889]
Length = 181
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+EWC H SGLT R +AS + E+A K+ F+ +V P +PM G
Sbjct: 47 AVHQSDELLDGMDEWCTNQHGRSGLTARCKASKFTEEDAIKQTLDFLKAWVPPAKSPMCG 106
>gi|74214051|dbj|BAE29442.1| unnamed protein product [Mus musculus]
Length = 228
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S+V++++A+ FV + P P+ G H
Sbjct: 78 DELLDSMSDWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 137
Query: 96 SKELL 100
K+ L
Sbjct: 138 DKKFL 142
>gi|449489187|ref|XP_002189554.2| PREDICTED: oligoribonuclease, mitochondrial [Taeniopygia guttata]
Length = 204
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/65 (38%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+EVL++ +EWC EHH SGLT V+ S +S+++A+ FV + P P+ G H
Sbjct: 54 DEVLESKSEWCKEHHGKSGLTKAVKESKISLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 113
Query: 96 SKELL 100
K+ L
Sbjct: 114 DKKFL 118
>gi|295677244|ref|YP_003605768.1| Exonuclease RNase T and DNA polymerase III [Burkholderia sp.
CCGE1002]
gi|295437087|gb|ADG16257.1| Exonuclease RNase T and DNA polymerase III [Burkholderia sp.
CCGE1002]
Length = 203
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M+EW H SGL DRV+ S+VS +A ++ +F+ +YV P +PM G
Sbjct: 59 AIHQSDETLAKMDEWNQNTHGRSGLIDRVKVSTVSEADATAQIREFLGQYVPPGKSPMCG 118
>gi|119474830|ref|ZP_01615183.1| oligoribonuclease [marine gamma proteobacterium HTCC2143]
gi|119451033|gb|EAW32266.1| oligoribonuclease [marine gamma proteobacterium HTCC2143]
Length = 195
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 39/61 (63%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L M+EW HH +SGLTDRV+ S + +A++ +F+ +YV T+P+
Sbjct: 54 LAIHQSQEILSGMDEWNTTHHGSSGLTDRVKQSLIVDRDAEQLTLEFLRQYVPEGTSPIC 113
Query: 91 G 91
G
Sbjct: 114 G 114
>gi|254583524|ref|XP_002497330.1| ZYRO0F03036p [Zygosaccharomyces rouxii]
gi|238940223|emb|CAR28397.1| ZYRO0F03036p [Zygosaccharomyces rouxii]
Length = 251
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++ ++ +L M WCVEHH +SGLT +V S + E+ ++ L QF+ KYV +P+T + G
Sbjct: 81 IHCDKSILDQMGPWCVEHHGSSGLTQKVLDSDKTREQVEEELLQFIRKYVPEPRTGVLSG 140
>gi|349579784|dbj|GAA24945.1| K7_Rex2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 269
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK 85
++Y EV+ MNEWC+EHH SGLT +V AS ++ + L +++ +Y+ K
Sbjct: 102 IHYGPEVMNKMNEWCIEHHGNSGLTAKVLASEKTLAQVQDELLEYIQRYIPDK 154
>gi|380028714|ref|XP_003698035.1| PREDICTED: LOW QUALITY PROTEIN: oligoribonuclease,
mitochondrial-like [Apis florea]
Length = 185
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 35/53 (66%)
Query: 39 VLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
VL++MNEWC+ H SGL + S +++++A++ L F+ KY+ +T P+ G
Sbjct: 55 VLEHMNEWCMNFHTKSGLVQESKCSKITLKDAEQMLLNFLKKYIPSQTCPLAG 107
>gi|157120016|ref|XP_001653489.1| oligoribonuclease, mitochondrial [Aedes aegypti]
gi|108875103|gb|EAT39328.1| AAEL008865-PC [Aedes aegypti]
Length = 210
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
EEVL MNEWC +H+ +GL VR S + +++A++ + FV KY K P+ G
Sbjct: 80 EEVLNAMNEWCQTNHSKTGLIQAVRESKIDLQKAEQMVLDFVKKYCPEKACPLAG 134
>gi|354494487|ref|XP_003509368.1| PREDICTED: oligoribonuclease, mitochondrial-like [Cricetulus
griseus]
gi|344237165|gb|EGV93268.1| Oligoribonuclease, mitochondrial [Cricetulus griseus]
Length = 237
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|146422161|ref|XP_001487022.1| hypothetical protein PGUG_00399 [Meyerozyma guilliermondii ATCC
6260]
gi|146388143|gb|EDK36301.1| hypothetical protein PGUG_00399 [Meyerozyma guilliermondii ATCC
6260]
Length = 288
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRV-RASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+YY +EVL +MNEWCV+ H SGLT +V + ++E+ L +++ ++V+P M G
Sbjct: 121 IYYPKEVLDSMNEWCVDQHGKSGLTAKVLENTDRTLEKVQDELLEYIKRFVEPNKGIMAG 180
>gi|333894627|ref|YP_004468502.1| oligoribonuclease [Alteromonas sp. SN2]
gi|332994645|gb|AEF04700.1| oligoribonuclease [Alteromonas sp. SN2]
Length = 181
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 35/55 (63%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++VL NM+EWC H +GLT R RASSV+ EA ++ F++ YV +P+ G
Sbjct: 52 DDVLDNMDEWCTRVHGETGLTARCRASSVNEAEAARQTMAFLSDYVDAGKSPLCG 106
>gi|13097411|gb|AAH03445.1| Rexo2 protein [Mus musculus]
Length = 205
Score = 53.9 bits (128), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 24/65 (36%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S+V++++A+ FV + P P+ G H
Sbjct: 55 DELLDSMSDWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 114
Query: 96 SKELL 100
K+ L
Sbjct: 115 DKKFL 119
>gi|395844116|ref|XP_003794811.1| PREDICTED: oligoribonuclease, mitochondrial isoform 1 [Otolemur
garnettii]
gi|395844118|ref|XP_003794812.1| PREDICTED: oligoribonuclease, mitochondrial isoform 2 [Otolemur
garnettii]
Length = 237
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|15600144|ref|NP_253638.1| oligoribonuclease [Pseudomonas aeruginosa PAO1]
gi|107104050|ref|ZP_01367968.1| hypothetical protein PaerPA_01005123 [Pseudomonas aeruginosa PACS2]
gi|116053100|ref|YP_793419.1| oligoribonuclease [Pseudomonas aeruginosa UCBPP-PA14]
gi|218894046|ref|YP_002442915.1| oligoribonuclease [Pseudomonas aeruginosa LESB58]
gi|254238334|ref|ZP_04931657.1| oligoribonuclease [Pseudomonas aeruginosa C3719]
gi|254244161|ref|ZP_04937483.1| oligoribonuclease [Pseudomonas aeruginosa 2192]
gi|296391791|ref|ZP_06881266.1| oligoribonuclease [Pseudomonas aeruginosa PAb1]
gi|313109953|ref|ZP_07795880.1| oligoribonuclease [Pseudomonas aeruginosa 39016]
gi|355643065|ref|ZP_09053074.1| hypothetical protein HMPREF1030_02160 [Pseudomonas sp. 2_1_26]
gi|386061122|ref|YP_005977644.1| oligoribonuclease [Pseudomonas aeruginosa M18]
gi|386063540|ref|YP_005978844.1| oligoribonuclease [Pseudomonas aeruginosa NCGM2.S1]
gi|392986627|ref|YP_006485214.1| oligoribonuclease [Pseudomonas aeruginosa DK2]
gi|416858311|ref|ZP_11913250.1| oligoribonuclease [Pseudomonas aeruginosa 138244]
gi|416877076|ref|ZP_11919617.1| oligoribonuclease [Pseudomonas aeruginosa 152504]
gi|418586307|ref|ZP_13150350.1| oligoribonuclease [Pseudomonas aeruginosa MPAO1/P1]
gi|418591829|ref|ZP_13155716.1| oligoribonuclease [Pseudomonas aeruginosa MPAO1/P2]
gi|419751804|ref|ZP_14278214.1| oligoribonuclease [Pseudomonas aeruginosa PADK2_CF510]
gi|420142149|ref|ZP_14649775.1| oligoribonuclease [Pseudomonas aeruginosa CIG1]
gi|421156470|ref|ZP_15615916.1| oligoribonuclease [Pseudomonas aeruginosa ATCC 14886]
gi|421177206|ref|ZP_15634862.1| oligoribonuclease [Pseudomonas aeruginosa CI27]
gi|421183030|ref|ZP_15640497.1| oligoribonuclease [Pseudomonas aeruginosa E2]
gi|421519515|ref|ZP_15966186.1| oligoribonuclease [Pseudomonas aeruginosa PAO579]
gi|424944257|ref|ZP_18360020.1| oligoribonuclease [Pseudomonas aeruginosa NCMG1179]
gi|451982637|ref|ZP_21930943.1| 3'-to-5' oligoribonuclease (orn) [Pseudomonas aeruginosa 18A]
gi|11386963|sp|P57665.1|ORN_PSEAE RecName: Full=Oligoribonuclease
gi|122256887|sp|Q02F67.1|ORN_PSEAB RecName: Full=Oligoribonuclease
gi|9951232|gb|AAG08336.1|AE004908_2 oligoribonuclease [Pseudomonas aeruginosa PAO1]
gi|115588321|gb|ABJ14336.1| oligoribonuclease [Pseudomonas aeruginosa UCBPP-PA14]
gi|126170265|gb|EAZ55776.1| oligoribonuclease [Pseudomonas aeruginosa C3719]
gi|126197539|gb|EAZ61602.1| oligoribonuclease [Pseudomonas aeruginosa 2192]
gi|218774274|emb|CAW30091.1| oligoribonuclease [Pseudomonas aeruginosa LESB58]
gi|310882382|gb|EFQ40976.1| oligoribonuclease [Pseudomonas aeruginosa 39016]
gi|334839590|gb|EGM18269.1| oligoribonuclease [Pseudomonas aeruginosa 138244]
gi|334840015|gb|EGM18681.1| oligoribonuclease [Pseudomonas aeruginosa 152504]
gi|346060703|dbj|GAA20586.1| oligoribonuclease [Pseudomonas aeruginosa NCMG1179]
gi|347307428|gb|AEO77542.1| oligoribonuclease [Pseudomonas aeruginosa M18]
gi|348032099|dbj|BAK87459.1| oligoribonuclease [Pseudomonas aeruginosa NCGM2.S1]
gi|354830065|gb|EHF14124.1| hypothetical protein HMPREF1030_02160 [Pseudomonas sp. 2_1_26]
gi|375043313|gb|EHS35942.1| oligoribonuclease [Pseudomonas aeruginosa MPAO1/P1]
gi|375049366|gb|EHS41866.1| oligoribonuclease [Pseudomonas aeruginosa MPAO1/P2]
gi|384401880|gb|EIE48233.1| oligoribonuclease [Pseudomonas aeruginosa PADK2_CF510]
gi|392322132|gb|AFM67512.1| oligoribonuclease [Pseudomonas aeruginosa DK2]
gi|403245098|gb|EJY58928.1| oligoribonuclease [Pseudomonas aeruginosa CIG1]
gi|404345434|gb|EJZ71786.1| oligoribonuclease [Pseudomonas aeruginosa PAO579]
gi|404519014|gb|EKA29803.1| oligoribonuclease [Pseudomonas aeruginosa ATCC 14886]
gi|404529850|gb|EKA39870.1| oligoribonuclease [Pseudomonas aeruginosa CI27]
gi|404540946|gb|EKA50326.1| oligoribonuclease [Pseudomonas aeruginosa E2]
gi|451759729|emb|CCQ83466.1| 3'-to-5' oligoribonuclease (orn) [Pseudomonas aeruginosa 18A]
gi|453046461|gb|EME94177.1| oligoribonuclease [Pseudomonas aeruginosa PA21_ST175]
Length = 180
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ EE+L M+EW H SGLT RVR S+VS+ EA+ + F+ ++V +++P+
Sbjct: 45 IAIHQPEEILAGMDEWNTRQHGQSGLTQRVRESTVSMAEAEAQTLAFLEQWVPKRSSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|403262740|ref|XP_003923732.1| PREDICTED: oligoribonuclease, mitochondrial [Saimiri boliviensis
boliviensis]
Length = 237
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|351702314|gb|EHB05233.1| Oligoribonuclease, mitochondrial [Heterocephalus glaber]
Length = 237
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|213401823|ref|XP_002171684.1| oligoribonuclease [Schizosaccharomyces japonicus yFS275]
gi|211999731|gb|EEB05391.1| oligoribonuclease [Schizosaccharomyces japonicus yFS275]
Length = 187
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 39/59 (66%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +++ L+ MN+WC++HH ASGLT+R R S+ + +++L ++ KY+ + ++
Sbjct: 49 IHVDDDKLRQMNDWCIDHHGASGLTERCRQCKQSVNQVEQKLLNYIQKYIPRRREALIA 107
>gi|259486196|tpe|CBF83844.1| TPA: RNA exonuclease Rex2, putative (AFU_orthologue; AFUA_3G11820)
[Aspergillus nidulans FGSC A4]
Length = 194
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++ + L +M++WC++ H +GLT RV+ S+V+ E A L ++ +Y+ KP+TA + G
Sbjct: 51 IHVPQSALDSMSQWCIDTHGRTGLTQRVQNSTVTPEAAAADLLAYIKRYIPKPRTALLAG 110
Query: 92 -EYHTSKELLKDSDHFLVFSW 111
H K L + + W
Sbjct: 111 NSVHADKAFLACGPYAAILEW 131
>gi|348574173|ref|XP_003472865.1| PREDICTED: oligoribonuclease, mitochondrial-like [Cavia porcellus]
Length = 237
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|296216233|ref|XP_002754546.1| PREDICTED: oligoribonuclease, mitochondrial [Callithrix jacchus]
Length = 237
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|119587653|gb|EAW67249.1| REX2, RNA exonuclease 2 homolog (S. cerevisiae), isoform CRA_a
[Homo sapiens]
Length = 179
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHE 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|344293102|ref|XP_003418263.1| PREDICTED: oligoribonuclease, mitochondrial-like [Loxodonta
africana]
Length = 237
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|194745839|ref|XP_001955392.1| GF18739 [Drosophila ananassae]
gi|190628429|gb|EDV43953.1| GF18739 [Drosophila ananassae]
Length = 187
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 43/69 (62%), Gaps = 1/69 (1%)
Query: 23 LQTQGTCKCGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV 82
++++G C + + +EV NMNEWC++HH SGL DR + S V ++A++ + ++ K +
Sbjct: 45 VKSEGPC-FAINHPQEVYDNMNEWCMKHHYESGLVDRCKNSQVKPKQAEELMLSYLKKNI 103
Query: 83 KPKTAPMVG 91
+ P+ G
Sbjct: 104 PERKCPLGG 112
>gi|157120012|ref|XP_001653487.1| oligoribonuclease, mitochondrial [Aedes aegypti]
gi|157120014|ref|XP_001653488.1| oligoribonuclease, mitochondrial [Aedes aegypti]
gi|108875101|gb|EAT39326.1| AAEL008865-PB [Aedes aegypti]
gi|108875102|gb|EAT39327.1| AAEL008865-PA [Aedes aegypti]
Length = 192
Score = 53.5 bits (127), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
EEVL MNEWC +H+ +GL VR S + +++A++ + FV KY K P+ G
Sbjct: 62 EEVLNAMNEWCQTNHSKTGLIQAVRESKIDLQKAEQMVLDFVKKYCPEKACPLAG 116
>gi|291383854|ref|XP_002708465.1| PREDICTED: small fragment nuclease [Oryctolagus cuniculus]
Length = 237
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|221102082|ref|XP_002161173.1| PREDICTED: oligoribonuclease, mitochondrial-like [Hydra
magnipapillata]
Length = 184
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVGE-YHT 95
E +LQNM +WC H SGLT V+ S V+++E ++ + FV+KY + + G H
Sbjct: 53 ESILQNMGDWCKVQHGKSGLTKAVQVSRVTLKECEREMICFVSKYTNKEKCLLAGNTVHV 112
Query: 96 SKELLK 101
KE LK
Sbjct: 113 DKEFLK 118
>gi|381151923|ref|ZP_09863792.1| oligoribonuclease (3'->5' exoribonuclease) [Methylomicrobium album
BG8]
gi|380883895|gb|EIC29772.1| oligoribonuclease (3'->5' exoribonuclease) [Methylomicrobium album
BG8]
Length = 188
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 40/61 (65%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ + +L M+EW +HH+ SGL DRV+AS + EA+++ +F+ +++ +T+PM
Sbjct: 46 IAVHQPDSILVEMDEWNQQHHSQSGLIDRVKASEIDTVEAERQTLEFLRQWLPDRTSPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|323353934|gb|EGA85787.1| Rex2p [Saccharomyces cerevisiae VL3]
Length = 229
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK 85
++Y EV+ MNEWC+EHH SGLT +V AS ++ + + L +++ Y+ K
Sbjct: 62 IHYGPEVMBKMNEWCIEHHGNSGLTAKVLASEKTLAQVEDELLEYIQXYIPDK 114
>gi|408372540|ref|ZP_11170240.1| oligoribonuclease [Alcanivorax hongdengensis A-11-3]
gi|407767515|gb|EKF75952.1| oligoribonuclease [Alcanivorax hongdengensis A-11-3]
Length = 185
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+Y + +L M+EW EHHN SGL RV+AS+V+ A+ R F+ +YV+ +PM G
Sbjct: 51 AVYQSNALLDGMDEWNTEHHNNSGLVARVQASTVNEAGAESRTIAFLEQYVEAGMSPMCG 110
>gi|365922162|ref|ZP_09446395.1| oligoribonuclease [Cardiobacterium valvarum F0432]
gi|364574840|gb|EHM52279.1| oligoribonuclease [Cardiobacterium valvarum F0432]
Length = 191
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 35/53 (66%)
Query: 39 VLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+L ++++W HH ASGL DR RAS++ A+ + F+ +YV P+T+P+ G
Sbjct: 53 ILDHLDDWNRTHHGASGLLDRCRASTIDTAAAEAQTLAFIREYVPPQTSPLCG 105
>gi|323336602|gb|EGA77868.1| Rex2p [Saccharomyces cerevisiae Vin13]
Length = 208
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK 85
++Y EV+ MNEWC+EHH SGLT +V AS ++ + + L +++ Y+ K
Sbjct: 41 IHYGPEVMBKMNEWCIEHHGNSGLTAKVLASEKTLAQVEDELLEYIQXYIPDK 93
>gi|350563223|ref|ZP_08932045.1| Exonuclease RNase T and DNA polymerase III [Thioalkalimicrobium
aerophilum AL3]
gi|349779087|gb|EGZ33434.1| Exonuclease RNase T and DNA polymerase III [Thioalkalimicrobium
aerophilum AL3]
Length = 181
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
E+ L M+ WC + H SGLT RV+AS V++ EA K F+A+Y+ +PM G
Sbjct: 51 EDELAKMDSWCQKTHGESGLTARVKASKVTLAEAQKATIDFLAQYISKGQSPMCG 105
>gi|444518577|gb|ELV12241.1| Oligoribonuclease, mitochondrial [Tupaia chinensis]
Length = 205
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 55 DELLDSMSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 114
Query: 96 SKELL 100
K+ L
Sbjct: 115 DKKFL 119
>gi|395008956|ref|ZP_10392541.1| oligoribonuclease (3'->5' exoribonuclease) [Acidovorax sp. CF316]
gi|394313010|gb|EJE50100.1| oligoribonuclease (3'->5' exoribonuclease) [Acidovorax sp. CF316]
Length = 195
Score = 53.5 bits (127), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ +L M+ W H SGL D+V+AS+V+ EEA++++ F+A+YV TAPM G
Sbjct: 58 AIHQSDALLNGMDAWNKGTHGRSGLIDKVKASTVTEEEAEQQIIAFLAQYVPKGTAPMCG 117
>gi|359427902|ref|ZP_09218945.1| oligoribonuclease [Acinetobacter sp. NBRC 100985]
gi|358236564|dbj|GAB00484.1| oligoribonuclease [Acinetobacter sp. NBRC 100985]
Length = 187
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 40/61 (65%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++ +L M+EW + H SGL +RVR S +S +A+++ +F+ K+V PK++PM
Sbjct: 47 LAVHQSDLILNAMDEWNTKQHGQSGLIERVRRSKLSALDAEQQTLEFLKKWVNPKSSPMC 106
Query: 91 G 91
G
Sbjct: 107 G 107
>gi|302563935|ref|NP_001180742.1| oligoribonuclease, mitochondrial [Macaca mulatta]
gi|402895329|ref|XP_003910782.1| PREDICTED: oligoribonuclease, mitochondrial [Papio anubis]
gi|90080269|dbj|BAE89616.1| unnamed protein product [Macaca fascicularis]
gi|355567066|gb|EHH23445.1| hypothetical protein EGK_06918 [Macaca mulatta]
gi|355752654|gb|EHH56774.1| hypothetical protein EGM_06249 [Macaca fascicularis]
gi|380811550|gb|AFE77650.1| oligoribonuclease, mitochondrial precursor [Macaca mulatta]
gi|383417339|gb|AFH31883.1| oligoribonuclease, mitochondrial precursor [Macaca mulatta]
gi|384946326|gb|AFI36768.1| oligoribonuclease, mitochondrial precursor [Macaca mulatta]
Length = 237
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHE 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|41152197|ref|NP_957038.1| oligoribonuclease, mitochondrial [Danio rerio]
gi|37590357|gb|AAH59540.1| Small fragment nuclease [Danio rerio]
Length = 199
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+++L M++WC EHH SGLT VR S +++++A+ F+ ++ P P+ G H
Sbjct: 53 DDLLDGMSDWCKEHHGKSGLTQAVRDSHITLQQAEYEFLSFIRQHTPPGVCPLAGNSVHA 112
Query: 96 SKELL 100
K+ L
Sbjct: 113 DKKFL 117
>gi|297690289|ref|XP_002822552.1| PREDICTED: oligoribonuclease, mitochondrial isoform 1 [Pongo
abelii]
gi|332208258|ref|XP_003253217.1| PREDICTED: oligoribonuclease, mitochondrial [Nomascus leucogenys]
gi|426370517|ref|XP_004052209.1| PREDICTED: oligoribonuclease, mitochondrial [Gorilla gorilla
gorilla]
Length = 237
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHE 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|431804724|ref|YP_007231627.1| oligoribonuclease [Pseudomonas putida HB3267]
gi|430795489|gb|AGA75684.1| oligoribonuclease [Pseudomonas putida HB3267]
Length = 180
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++N+EVL M+EW H ASGLT RVR S V + EA+ + F+ ++V +P+
Sbjct: 45 IAIHHNDEVLARMDEWNTRTHGASGLTQRVRESKVGMAEAEAQTIAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|385208586|ref|ZP_10035454.1| oligoribonuclease (3'->5' exoribonuclease) [Burkholderia sp. Ch1-1]
gi|385180924|gb|EIF30200.1| oligoribonuclease (3'->5' exoribonuclease) [Burkholderia sp. Ch1-1]
Length = 207
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRV+AS+VS +A +++ F++ YV P +PM G
Sbjct: 59 AIHQSDETLAGMDQWNQNTHGRSGLIDRVKASTVSEADATEQIRDFLSVYVPPGKSPMCG 118
>gi|307188078|gb|EFN72910.1| Oligoribonuclease, mitochondrial [Camponotus floridanus]
Length = 171
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 39 VLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+L NMN WC + H +GLT+ R S+VS+++A+ + F+ +Y+ P P+ G
Sbjct: 42 ILDNMNAWCKKQHKKTGLTENSRLSTVSLKDAENMVLNFLQEYIHPGVCPLAG 94
>gi|351731063|ref|ZP_08948754.1| oligoribonuclease [Acidovorax radicis N35]
Length = 192
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E+L M+ W H SGL D+V+AS+V+ EEA++++ F+++YV TAPM G
Sbjct: 58 AIHQPDELLNKMDAWNKGTHGRSGLIDKVKASTVTEEEAEQQIIAFLSQYVPKGTAPMCG 117
>gi|224496106|ref|NP_056338.2| oligoribonuclease, mitochondrial precursor [Homo sapiens]
gi|55637001|ref|XP_508768.1| PREDICTED: oligoribonuclease, mitochondrial isoform 2 [Pan
troglodytes]
gi|397467679|ref|XP_003805537.1| PREDICTED: oligoribonuclease, mitochondrial [Pan paniscus]
gi|116242694|sp|Q9Y3B8.3|ORN_HUMAN RecName: Full=Oligoribonuclease, mitochondrial; AltName: Full=RNA
exonuclease 2 homolog; AltName: Full=Small fragment
nuclease; Flags: Precursor
gi|62897961|dbj|BAD96920.1| small fragment nuclease variant [Homo sapiens]
gi|79158846|gb|AAI07888.1| REXO2 protein [Homo sapiens]
gi|85397890|gb|AAI05025.1| Small fragment nuclease [Homo sapiens]
gi|85397892|gb|AAI05027.1| REX2, RNA exonuclease 2 homolog (S. cerevisiae) [Homo sapiens]
gi|119587654|gb|EAW67250.1| REX2, RNA exonuclease 2 homolog (S. cerevisiae), isoform CRA_b
[Homo sapiens]
gi|189065256|dbj|BAG34979.1| unnamed protein product [Homo sapiens]
gi|219520365|gb|AAI43702.1| REX2, RNA exonuclease 2 homolog (S. cerevisiae) [Homo sapiens]
gi|410222394|gb|JAA08416.1| REX2, RNA exonuclease 2 homolog [Pan troglodytes]
gi|410222396|gb|JAA08417.1| REX2, RNA exonuclease 2 homolog [Pan troglodytes]
gi|410250550|gb|JAA13242.1| REX2, RNA exonuclease 2 homolog [Pan troglodytes]
gi|410350469|gb|JAA41838.1| REX2, RNA exonuclease 2 homolog [Pan troglodytes]
Length = 237
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHE 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|387126545|ref|YP_006295150.1| 3'-to-5' oligoribonuclease [Methylophaga sp. JAM1]
gi|386273607|gb|AFI83505.1| 3'-to-5' oligoribonuclease (orn) [Methylophaga sp. JAM1]
Length = 183
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++ +L M+EW + H SGL DRVR S V++E+A++ F+ K+V +PM
Sbjct: 46 IAIHQSDAILAGMDEWNTKQHGGSGLADRVRNSIVTVEQAEQETLDFLKKHVPAGISPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|91784777|ref|YP_559983.1| oligoribonuclease [Burkholderia xenovorans LB400]
gi|122970228|sp|Q13VF8.1|ORN_BURXL RecName: Full=Oligoribonuclease
gi|91688731|gb|ABE31931.1| Oligoribonuclease [Burkholderia xenovorans LB400]
Length = 207
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRV+AS+VS +A +++ F++ YV P +PM G
Sbjct: 59 AIHQSDETLAGMDQWNQNTHGRSGLIDRVKASTVSEADATEQIRDFLSVYVPPGKSPMCG 118
>gi|171057672|ref|YP_001790021.1| oligoribonuclease [Leptothrix cholodnii SP-6]
gi|170775117|gb|ACB33256.1| Exonuclease RNase T and DNA polymerase III [Leptothrix cholodnii
SP-6]
Length = 187
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 40/61 (65%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++EVL M+ W H SGLT+RV+AS++ ++A ++ +F+ +YV KT+PM
Sbjct: 52 IAVHQSDEVLDRMDAWNRGTHGKSGLTERVKASTIGEDQAQDQMIEFLKQYVSKKTSPMC 111
Query: 91 G 91
G
Sbjct: 112 G 112
>gi|410298874|gb|JAA28037.1| REX2, RNA exonuclease 2 homolog [Pan troglodytes]
gi|410298876|gb|JAA28038.1| REX2, RNA exonuclease 2 homolog [Pan troglodytes]
Length = 237
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHE 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|398868113|ref|ZP_10623533.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM78]
gi|398234366|gb|EJN20243.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM78]
Length = 180
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++E+L M+EW H SGLT RVR S +S+ EA+ + F+ K+V +P+
Sbjct: 45 IAIHHSDEILAGMDEWNTRQHGGSGLTQRVRESRISMAEAEAQTIAFLEKWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|407893968|ref|ZP_11152998.1| oligoribonuclease [Diplorickettsia massiliensis 20B]
Length = 184
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ E +L +M++W + H SGL +RVRAS++S + A+K F+ +V P +PM G
Sbjct: 47 AIFQEESILASMDDWNKKQHKGSGLLERVRASAISEQIAEKETLDFIMTHVPPNKSPMCG 106
>gi|62901864|gb|AAY18883.1| CGI-114 [synthetic construct]
Length = 229
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 79 DELLDSMSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHE 138
Query: 96 SKELL 100
K+ L
Sbjct: 139 DKKFL 143
>gi|121604376|ref|YP_981705.1| oligoribonuclease [Polaromonas naphthalenivorans CJ2]
gi|120593345|gb|ABM36784.1| Exonuclease, RNase T and DNA polymerase III [Polaromonas
naphthalenivorans CJ2]
Length = 187
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 39/61 (63%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L M++W H SGL D+V+AS+V+ E+A +L F+A+YV T PM
Sbjct: 53 LAIHQSDELLDQMDKWNKGTHGRSGLIDKVKASTVTEEDAQAQLLAFLARYVPKGTTPMC 112
Query: 91 G 91
G
Sbjct: 113 G 113
>gi|426245624|ref|XP_004016609.1| PREDICTED: oligoribonuclease, mitochondrial [Ovis aries]
Length = 290
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 140 DELLDSMSDWCKEHHGKSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 199
Query: 96 SKELL 100
K+ L
Sbjct: 200 DKKFL 204
>gi|401624737|gb|EJS42787.1| rex2p [Saccharomyces arboricola H-6]
Length = 273
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 35/53 (66%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK 85
++Y EV+ MN+WC+EHH SGLT +V AS ++ + + L +++ +Y+ K
Sbjct: 102 IHYGPEVMGKMNQWCIEHHGDSGLTAKVLASDKTLAQVEDELLEYIRRYIPDK 154
>gi|156844039|ref|XP_001645084.1| hypothetical protein Kpol_1035p39 [Vanderwaltozyma polyspora DSM
70294]
gi|156115740|gb|EDO17226.1| hypothetical protein Kpol_1035p39 [Vanderwaltozyma polyspora DSM
70294]
Length = 263
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++Y+EEV+ MNEWC++ H SGLT++V S+ S+ + L + V KY+ +P + G
Sbjct: 90 IHYDEEVMSKMNEWCIDQHGKSGLTEKVLKSNKSLSRVQQELIRHVKKYIPEPNKGVLAG 149
>gi|348617891|ref|ZP_08884425.1| Oligoribonuclease [Candidatus Glomeribacter gigasporarum BEG34]
gi|347816835|emb|CCD29079.1| Oligoribonuclease [Candidatus Glomeribacter gigasporarum BEG34]
Length = 200
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 41/60 (68%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L+ ++EVL+ M+ W + H SGL +RVRAS+++ ++A ++L F+ +YV P +P+ G
Sbjct: 60 ALHQSDEVLEGMDSWNQKMHGRSGLIERVRASALNEQDAAEQLLAFLNRYVPPGKSPLCG 119
>gi|417397635|gb|JAA45851.1| Putative oligoribonuclease mitochondrial-like protein [Desmodus
rotundus]
Length = 237
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|5817183|emb|CAB53690.1| hypothetical protein [Homo sapiens]
gi|49065426|emb|CAG38531.1| DKFZP566E144 [Homo sapiens]
gi|117646830|emb|CAL37530.1| hypothetical protein [synthetic construct]
gi|208965440|dbj|BAG72734.1| REX2, RNA exonuclease 2 homolog [synthetic construct]
Length = 237
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGRSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHE 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|449448848|ref|XP_004142177.1| PREDICTED: oligoribonuclease-like [Cucumis sativus]
gi|449503429|ref|XP_004161998.1| PREDICTED: oligoribonuclease-like [Cucumis sativus]
Length = 253
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 24/50 (48%), Positives = 35/50 (70%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV 82
++ ++E L M EWC HH ASGLT +V S++S EA+K++ QFV K+V
Sbjct: 116 IHQSKECLDKMGEWCQSHHAASGLTKKVLRSTISEREAEKQVIQFVKKHV 165
>gi|257138397|ref|ZP_05586659.1| oligoribonuclease [Burkholderia thailandensis E264]
Length = 201
Score = 53.1 bits (126), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRVR SSV+ +A ++ F+ +YV P +PM G
Sbjct: 59 AIHQSDETLAKMDDWNKNTHGRSGLIDRVRVSSVTEADAAAQIEAFLGQYVPPGKSPMCG 118
>gi|410971967|ref|XP_003992432.1| PREDICTED: oligoribonuclease, mitochondrial [Felis catus]
Length = 237
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|167619167|ref|ZP_02387798.1| oligoribonuclease [Burkholderia thailandensis Bt4]
Length = 201
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRVR SSV+ +A ++ F+ +YV P +PM G
Sbjct: 59 AIHQSDETLAKMDDWNKNTHGRSGLIDRVRVSSVTEADAAAQIEAFLGQYVPPGKSPMCG 118
>gi|149716526|ref|XP_001502237.1| PREDICTED: oligoribonuclease, mitochondrial-like [Equus caballus]
Length = 237
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|406975538|gb|EKD98264.1| hypothetical protein ACD_23C00505G0003 [uncultured bacterium]
Length = 169
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 25/59 (42%), Positives = 38/59 (64%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ +L M++W H SGL D+V+AS+V EEA+K L QF++ YV APM G
Sbjct: 34 IHQSDALLDQMDKWNKSTHGKSGLIDKVKASTVGEEEAEKILLQFLSHYVPKSGAPMCG 92
>gi|422619516|ref|ZP_16688205.1| oligoribonuclease [Pseudomonas syringae pv. japonica str. M301072]
gi|424065746|ref|ZP_17803220.1| oligoribonuclease [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
gi|424070449|ref|ZP_17807884.1| oligoribonuclease [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|330899885|gb|EGH31304.1| oligoribonuclease [Pseudomonas syringae pv. japonica str. M301072]
gi|408000604|gb|EKG40954.1| oligoribonuclease [Pseudomonas syringae pv. avellanae str.
ISPaVe037]
gi|408003026|gb|EKG43243.1| oligoribonuclease [Pseudomonas syringae pv. avellanae str.
ISPaVe013]
Length = 178
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT RVR S+VS+ EA+ + +F+ +V +++P+
Sbjct: 45 IAVHQSDETLAKMDEWNTRQHGGSGLTQRVRESTVSMAEAEAQTLEFIKLWVPERSSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|301782497|ref|XP_002926662.1| PREDICTED: oligoribonuclease, mitochondrial-like [Ailuropoda
melanoleuca]
gi|281353930|gb|EFB29514.1| hypothetical protein PANDA_016351 [Ailuropoda melanoleuca]
Length = 237
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|4929697|gb|AAD34109.1|AF151872_1 CGI-114 protein [Homo sapiens]
Length = 205
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 55 DELLDSMSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHE 114
Query: 96 SKELL 100
K+ L
Sbjct: 115 DKKFL 119
>gi|83720885|ref|YP_442207.1| oligoribonuclease [Burkholderia thailandensis E264]
gi|83654710|gb|ABC38773.1| oligoribonuclease [Burkholderia thailandensis E264]
Length = 229
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRVR SSV+ +A ++ F+ +YV P +PM G
Sbjct: 87 AIHQSDETLAKMDDWNKNTHGRSGLIDRVRVSSVTEADAAAQIEAFLGQYVPPGKSPMCG 146
>gi|429241246|ref|NP_596699.2| RNA exonuclease (predicted) [Schizosaccharomyces pombe 972h-]
gi|408360172|sp|O94626.2|ORN_SCHPO RecName: Full=Probable oligoribonuclease
gi|347834398|emb|CAB37438.2| RNA exonuclease (predicted) [Schizosaccharomyces pombe]
Length = 252
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 37/56 (66%)
Query: 36 NEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+E+ L MN+WC+E H SGLT+R R S++++++ + +L ++ KY+ K ++
Sbjct: 123 DEKQLSEMNDWCIEQHGKSGLTERCRQSNLTVKDVENQLLAYIKKYIPKKREALIA 178
>gi|311263942|ref|XP_003129926.1| PREDICTED: oligoribonuclease, mitochondrial-like [Sus scrofa]
Length = 237
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|88858891|ref|ZP_01133532.1| oligoribonuclease [Pseudoalteromonas tunicata D2]
gi|88819117|gb|EAR28931.1| oligoribonuclease [Pseudoalteromonas tunicata D2]
Length = 181
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+EWCV+ H SGLT R R SS + ++A ++ F+ K+V +PM G
Sbjct: 47 AVHQSDELLDGMDEWCVKQHGGSGLTARCRQSSFTEQDAIEQTISFLEKWVPKGKSPMCG 106
>gi|333907808|ref|YP_004481394.1| oligoribonuclease [Marinomonas posidonica IVIA-Po-181]
gi|333477814|gb|AEF54475.1| Oligoribonuclease [Marinomonas posidonica IVIA-Po-181]
Length = 183
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + V+ M+EWC +HH ASGLT +V AS + + A+ + F+ +YV +P+ G
Sbjct: 47 AIHQEKSVMDGMDEWCTQHHGASGLTAKVLASDIDMAAAEAQTIAFLEQYVPAGVSPICG 106
>gi|126165254|ref|NP_001075204.1| oligoribonuclease, mitochondrial precursor [Bos taurus]
gi|158512836|sp|A2VE52.1|ORN_BOVIN RecName: Full=Oligoribonuclease, mitochondrial; AltName: Full=RNA
exonuclease 2 homolog; AltName: Full=Small fragment
nuclease; Flags: Precursor
gi|126010762|gb|AAI33576.1| REX2, RNA exonuclease 2 homolog (S. cerevisiae) [Bos taurus]
gi|296480277|tpg|DAA22392.1| TPA: oligoribonuclease, mitochondrial precursor [Bos taurus]
gi|440909198|gb|ELR59132.1| Oligoribonuclease, mitochondrial [Bos grunniens mutus]
Length = 237
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|383865074|ref|XP_003708000.1| PREDICTED: probable oligoribonuclease-like [Megachile rotundata]
Length = 189
Score = 52.8 bits (125), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ VL MN+WC +HH SGL R+S +S++ A++ L F++ YV + P+ G
Sbjct: 53 DTVLDAMNDWCTKHHTKSGLIKESRSSPISLKAAEQLLLNFLSSYVPKGSCPLAG 107
>gi|66043831|ref|YP_233672.1| oligoribonuclease [Pseudomonas syringae pv. syringae B728a]
gi|422673814|ref|ZP_16733171.1| oligoribonuclease [Pseudomonas syringae pv. aceris str. M302273]
gi|75503630|sp|Q4ZYY8.1|ORN_PSEU2 RecName: Full=Oligoribonuclease
gi|63254538|gb|AAY35634.1| Exonuclease [Pseudomonas syringae pv. syringae B728a]
gi|330971545|gb|EGH71611.1| oligoribonuclease [Pseudomonas syringae pv. aceris str. M302273]
Length = 178
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT RVR S+VS+ EA+ + +F+ +V +++P+
Sbjct: 45 IAVHQSDETLAKMDEWNTRQHGGSGLTQRVRESTVSMAEAEAQTLEFIKLWVPERSSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|422639072|ref|ZP_16702502.1| oligoribonuclease [Pseudomonas syringae Cit 7]
gi|440742873|ref|ZP_20922195.1| oligoribonuclease [Pseudomonas syringae BRIP39023]
gi|330951466|gb|EGH51726.1| oligoribonuclease [Pseudomonas syringae Cit 7]
gi|440376724|gb|ELQ13387.1| oligoribonuclease [Pseudomonas syringae BRIP39023]
Length = 178
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT RVR S+VS+ EA+ + +F+ +V +++P+
Sbjct: 45 IAVHQSDETLAKMDEWNTRQHGGSGLTQRVRESTVSMAEAETQTLEFIKLWVPERSSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|422630435|ref|ZP_16695632.1| oligoribonuclease [Pseudomonas syringae pv. pisi str. 1704B]
gi|422667542|ref|ZP_16727405.1| oligoribonuclease [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|440720736|ref|ZP_20901148.1| oligoribonuclease [Pseudomonas syringae BRIP34876]
gi|440727809|ref|ZP_20908035.1| oligoribonuclease [Pseudomonas syringae BRIP34881]
gi|443641296|ref|ZP_21125146.1| 3'-to-5' oligoribonuclease [Pseudomonas syringae pv. syringae B64]
gi|330939856|gb|EGH43089.1| oligoribonuclease [Pseudomonas syringae pv. pisi str. 1704B]
gi|330978958|gb|EGH78017.1| oligoribonuclease [Pseudomonas syringae pv. aptata str. DSM 50252]
gi|440363214|gb|ELQ00384.1| oligoribonuclease [Pseudomonas syringae BRIP34881]
gi|440365106|gb|ELQ02220.1| oligoribonuclease [Pseudomonas syringae BRIP34876]
gi|443281313|gb|ELS40318.1| 3'-to-5' oligoribonuclease [Pseudomonas syringae pv. syringae B64]
Length = 178
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT RVR S+VS+ EA+ + +F+ +V +++P+
Sbjct: 45 IAVHQSDETLAKMDEWNTRQHGGSGLTQRVRESTVSMAEAEAQTLEFIKLWVPERSSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|329120336|ref|ZP_08249004.1| oligoribonuclease [Neisseria bacilliformis ATCC BAA-1200]
gi|327462677|gb|EGF09000.1| oligoribonuclease [Neisseria bacilliformis ATCC BAA-1200]
Length = 184
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++EVL M+EWC H +GLT RVR S + E ++ L F+A ++ + +PM G
Sbjct: 48 AVHQSDEVLDAMDEWCTATHGRTGLTQRVRESQYTEAEVEQNLLDFIAAWIPAQASPMCG 107
>gi|326470961|gb|EGD94970.1| RNA exonuclease Rex2 [Trichophyton tonsurans CBS 112818]
gi|326482205|gb|EGE06215.1| RNA exonuclease Rex2 [Trichophyton equinum CBS 127.97]
Length = 188
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKP-KTAPMVG-EYH 94
+EVL MN WC++ H SGLT V AS + EEA + L ++ +YV +TA + G H
Sbjct: 55 QEVLDRMNAWCIDTHGRSGLTAAVLASPTTAEEAARDLLAYIKQYVPTQRTALLAGNSVH 114
Query: 95 TSKELLKDSDHFLVFSW 111
+ L + V W
Sbjct: 115 ADRAFLAQPPYVQVLDW 131
>gi|289672571|ref|ZP_06493461.1| oligoribonuclease [Pseudomonas syringae pv. syringae FF5]
Length = 178
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT RVR S+VS+ EA+ + +F+ +V +++P+
Sbjct: 45 IAVHQSDETLAKMDEWNTRQHGGSGLTQRVRESTVSMAEAEAQTLEFIKLWVPERSSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|195331405|ref|XP_002032393.1| GM23540 [Drosophila sechellia]
gi|194121336|gb|EDW43379.1| GM23540 [Drosophila sechellia]
Length = 184
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 23 LQTQGTCKCGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV 82
++++G C + + +EV +MNEWC+E H SGL DR ++S V EEA + ++ K +
Sbjct: 42 VKSEGAC-FAINHPQEVYDSMNEWCMEQHYKSGLIDRCKSSDVKPEEASNLVLSYIEKNI 100
Query: 83 KPKTAPMVG 91
P+ G
Sbjct: 101 PKGVCPLGG 109
>gi|431908298|gb|ELK11896.1| Oligoribonuclease, mitochondrial [Pteropus alecto]
Length = 237
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 39/65 (60%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTMTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHA 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|444336987|ref|ZP_21151066.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype a
str. A160]
gi|443543543|gb|ELT53744.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype a
str. A160]
Length = 245
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E+L M+EWCV+ H A+GL +RV+AS ++ A+ + F+ KYV T+P+ G
Sbjct: 110 AIHQPDELLNKMSEWCVKTHMANGLIERVKASKLTERAAELQTLDFLKKYVPKGTSPICG 169
>gi|26991580|ref|NP_747005.1| oligoribonuclease [Pseudomonas putida KT2440]
gi|148549980|ref|YP_001270082.1| oligoribonuclease [Pseudomonas putida F1]
gi|386014175|ref|YP_005932452.1| Orn [Pseudomonas putida BIRD-1]
gi|395445745|ref|YP_006385998.1| oligoribonuclease [Pseudomonas putida ND6]
gi|397695342|ref|YP_006533224.1| Oligoribonuclease [Pseudomonas putida DOT-T1E]
gi|421523712|ref|ZP_15970341.1| oligoribonuclease [Pseudomonas putida LS46]
gi|37999402|sp|Q88DC5.1|ORN_PSEPK RecName: Full=Oligoribonuclease
gi|166216581|sp|A5W9T8.1|ORN_PSEP1 RecName: Full=Oligoribonuclease
gi|24986668|gb|AAN70469.1|AE016688_8 oligoribonuclease [Pseudomonas putida KT2440]
gi|148514038|gb|ABQ80898.1| Exonuclease, RNase T and DNA polymerase III [Pseudomonas putida F1]
gi|313500881|gb|ADR62247.1| Orn [Pseudomonas putida BIRD-1]
gi|388559742|gb|AFK68883.1| oligoribonuclease [Pseudomonas putida ND6]
gi|397332072|gb|AFO48431.1| Oligoribonuclease [Pseudomonas putida DOT-T1E]
gi|402752698|gb|EJX13203.1| oligoribonuclease [Pseudomonas putida LS46]
Length = 180
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++EVL M+EW H ASGLT RVR S VS+ EA+ + F+ ++V +P+
Sbjct: 45 IAIHHSDEVLARMDEWNTRTHGASGLTQRVRESKVSMAEAEAQTIAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|326795802|ref|YP_004313622.1| oligoribonuclease [Marinomonas mediterranea MMB-1]
gi|326546566|gb|ADZ91786.1| Oligoribonuclease [Marinomonas mediterranea MMB-1]
Length = 182
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 39 VLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
V+ M+EWC HH SGLT RV S++++E+A++ F+ KY+ +P+ G
Sbjct: 54 VMDAMDEWCTTHHGQSGLTQRVLDSAITMEQAEQETIAFLEKYLPAGKSPICG 106
>gi|262374958|ref|ZP_06068192.1| oligoribonuclease [Acinetobacter lwoffii SH145]
gi|262309971|gb|EEY91100.1| oligoribonuclease [Acinetobacter lwoffii SH145]
Length = 185
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 36/53 (67%)
Query: 39 VLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+L M+EW H SGL +RVR S ++ ++A+++ +F+ K+V PK++PM G
Sbjct: 55 LLNAMDEWNTRQHGQSGLIERVRRSKLTAQDAEQQTIEFLKKWVNPKSSPMCG 107
>gi|302189797|ref|ZP_07266470.1| oligoribonuclease [Pseudomonas syringae pv. syringae 642]
Length = 178
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT RVR S+VS+ EA+ + +F+ +V +++P+
Sbjct: 45 IAVHQSDETLAKMDEWNTRQHGGSGLTQRVRESTVSMAEAEAQTLEFIKLWVPERSSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|378948500|ref|YP_005205988.1| protein Orn [Pseudomonas fluorescens F113]
gi|359758514|gb|AEV60593.1| Orn [Pseudomonas fluorescens F113]
Length = 180
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++E+L M+EW H SGLT RVR S++S+ EA+ + F+ ++V +P+
Sbjct: 45 IAIHHSDEILAGMDEWNTRQHGGSGLTQRVRESTISMAEAEAQTLAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|238026568|ref|YP_002910799.1| oligoribonuclease [Burkholderia glumae BGR1]
gi|237875762|gb|ACR28095.1| Oligoribonuclease [Burkholderia glumae BGR1]
Length = 202
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M+ W H SGL DRVRAS+VS A ++ F+A+YV P +PM G
Sbjct: 59 AIHQSDETLAKMDAWNQSTHGRSGLIDRVRASTVSEAAAAAQIEAFLAQYVSPGKSPMCG 118
>gi|195503017|ref|XP_002098476.1| GE23924 [Drosophila yakuba]
gi|194184577|gb|EDW98188.1| GE23924 [Drosophila yakuba]
Length = 184
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 23 LQTQGTCKCGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV 82
++++G C + + +EV MNEWC EHH SGL DR ++S V E+A L ++ V
Sbjct: 42 VKSEGPC-FAINHPQEVYDTMNEWCKEHHYKSGLVDRCKSSDVKPEQASNLLLSYLEMNV 100
Query: 83 KPKTAPMVG 91
+ P+ G
Sbjct: 101 PKRACPLGG 109
>gi|119946941|ref|YP_944621.1| oligoribonuclease [Psychromonas ingrahamii 37]
gi|119865545|gb|ABM05022.1| Exonuclease, RNase T and DNA polymerase III [Psychromonas
ingrahamii 37]
Length = 179
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + + L M+EWC H SGLTDRV+AS +S A++ F+ ++V AP+ G
Sbjct: 46 IHQSNQALDAMDEWCTTQHGKSGLTDRVKASQISCANAEQATLDFLKEWVPAGAAPLCG 104
>gi|24372183|ref|NP_716225.1| 3'-5' oligoribonuclease Orn [Shewanella oneidensis MR-1]
gi|29611787|sp|Q8EJ78.1|ORN_SHEON RecName: Full=Oligoribonuclease
gi|24346089|gb|AAN53670.1| 3'-5' oligoribonuclease Orn [Shewanella oneidensis MR-1]
Length = 181
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++EVL M++W +HH SGL +RVRAS V+ EA + F+A+YV +PM
Sbjct: 46 IAIHQSDEVLAAMDDWNQKHHGESGLIERVRASQVNEAEAVAQTIAFLAQYVPKGVSPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|416891596|ref|ZP_11923143.1| oligoribonuclease [Aggregatibacter aphrophilus ATCC 33389]
gi|347815144|gb|EGY31784.1| oligoribonuclease [Aggregatibacter aphrophilus ATCC 33389]
Length = 181
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+E+L M+EWCV+ H A+GL +RV+AS ++ A+ + F+ KYV T+P+ G
Sbjct: 52 DELLNKMSEWCVKTHTANGLVERVKASKLNERAAELQTLDFLKKYVPKGTSPICG 106
>gi|424863879|ref|ZP_18287791.1| oligoribonuclease [SAR86 cluster bacterium SAR86A]
gi|400757200|gb|EJP71412.1| oligoribonuclease [SAR86 cluster bacterium SAR86A]
Length = 182
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 37/54 (68%)
Query: 38 EVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
E+L++M+EW + HH +SGL + V+ S V+ + A+ +F++KYV K +PM G
Sbjct: 55 EILESMDEWNLTHHGSSGLIEEVKKSDVTEQIAEIETLEFISKYVGEKVSPMCG 108
>gi|114777190|ref|ZP_01452201.1| oligoribonuclease [Mariprofundus ferrooxydans PV-1]
gi|114552335|gb|EAU54818.1| oligoribonuclease [Mariprofundus ferrooxydans PV-1]
Length = 183
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E L M+EW HH SGLT RVRAS S+ A+++ F+ KYV ++P+ G
Sbjct: 48 IHQPDEALDAMDEWNTTHHGESGLTARVRASRTSMAVAEQKTLDFIRKYVPEGSSPLCG 106
>gi|254448875|ref|ZP_05062331.1| oligoribonuclease [gamma proteobacterium HTCC5015]
gi|198261565|gb|EDY85854.1| oligoribonuclease [gamma proteobacterium HTCC5015]
Length = 185
Score = 52.8 bits (125), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 39/61 (63%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ + V+ M+EW H SGLT+RV+ S V+++EA+++ +F+ +YV + +PM
Sbjct: 50 LAIHQPDAVMDGMDEWNTRQHGQSGLTERVKNSDVNMQEAERQTIEFLEQYVGARKSPMC 109
Query: 91 G 91
G
Sbjct: 110 G 110
>gi|398957570|ref|ZP_10677326.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM33]
gi|398147990|gb|EJM36681.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM33]
Length = 180
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++E+L M+EW H SGLT RVR S +S+ EA+ F+ K+V +P+
Sbjct: 45 IAIHHSDEILAGMDEWNTRQHGGSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|387121959|ref|YP_006287842.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans D7S-1]
gi|415759030|ref|ZP_11481680.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans D17P-3]
gi|416032289|ref|ZP_11572770.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype a
str. H5P1]
gi|416046112|ref|ZP_11575594.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype d
str. I63B]
gi|416070141|ref|ZP_11583566.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype f
str. D18P1]
gi|429732661|ref|ZP_19267256.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans Y4]
gi|347994818|gb|EGY36060.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype d
str. I63B]
gi|347999213|gb|EGY40064.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype f
str. D18P1]
gi|348000219|gb|EGY41011.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype a
str. H5P1]
gi|348655146|gb|EGY70623.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans D17P-3]
gi|385876451|gb|AFI88010.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans D7S-1]
gi|429155580|gb|EKX98246.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans Y4]
Length = 182
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +E+L M+EWCV+ H A+GL +RV+AS ++ A+ + F+ KYV T+P+
Sbjct: 46 LAIHQPDELLNKMSEWCVKTHMANGLIERVKASKLTERAAELQTLDFLKKYVPKGTSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|71733293|ref|YP_272859.1| oligoribonuclease [Pseudomonas syringae pv. phaseolicola 1448A]
gi|422603930|ref|ZP_16675948.1| oligoribonuclease [Pseudomonas syringae pv. mori str. 301020]
gi|123638427|sp|Q48P10.1|ORN_PSE14 RecName: Full=Oligoribonuclease
gi|71553846|gb|AAZ33057.1| oligoribonuclease [Pseudomonas syringae pv. phaseolicola 1448A]
gi|298160609|gb|EFI01631.1| Oligoribonuclease [Pseudomonas savastanoi pv. savastanoi NCPPB
3335]
gi|330886590|gb|EGH20251.1| oligoribonuclease [Pseudomonas syringae pv. mori str. 301020]
Length = 178
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT RVR S++S+ EA+ + +F+ +V +++P+
Sbjct: 45 IAVHQSDETLAKMDEWNTRQHGGSGLTQRVRESTISMAEAEAQTLEFIKLWVPERSSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|398942038|ref|ZP_10670101.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp.
GM41(2012)]
gi|398161140|gb|EJM49382.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp.
GM41(2012)]
Length = 180
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++E+L M+EW H SGLT RVR S +S+ EA+ F+ K+V +P+
Sbjct: 45 IAIHHSDEILAGMDEWNTRQHGGSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|238486688|ref|XP_002374582.1| RNA exonuclease Rex2, putative [Aspergillus flavus NRRL3357]
gi|317144078|ref|XP_003189562.1| RNA exonuclease Rex2 [Aspergillus oryzae RIB40]
gi|220699461|gb|EED55800.1| RNA exonuclease Rex2, putative [Aspergillus flavus NRRL3357]
Length = 191
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++ ++ + NM++WC++ H +GLT V AS+V+ E A L ++ +YV +P+TA + G
Sbjct: 51 IHASKTTMDNMSQWCIDTHGRTGLTAAVLASTVTPESAASELLAYIQRYVPQPRTALLAG 110
Query: 92 -EYHTSKELLKDSDHFLVFSW 111
H K L + V W
Sbjct: 111 NSVHADKAFLSRGPYAKVLEW 131
>gi|422300344|ref|ZP_16387864.1| oligoribonuclease [Pseudomonas avellanae BPIC 631]
gi|407987501|gb|EKG30291.1| oligoribonuclease [Pseudomonas avellanae BPIC 631]
Length = 178
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT RVR S++S+ EA+ + +F+ +V +++P+
Sbjct: 45 IAVHQSDETLAKMDEWNTRQHGGSGLTQRVRESTISMAEAEAQTLEFIKLWVPERSSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|422652914|ref|ZP_16715690.1| oligoribonuclease [Pseudomonas syringae pv. actinidiae str.
M302091]
gi|330965973|gb|EGH66233.1| oligoribonuclease [Pseudomonas syringae pv. actinidiae str.
M302091]
Length = 178
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT RVR S++S+ EA+ + +F+ +V +++P+
Sbjct: 45 IAVHQSDETLAKMDEWNTRQHGGSGLTQRVRESTISMAEAEAQTLEFIKLWVPERSSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|429332809|ref|ZP_19213521.1| oligoribonuclease [Pseudomonas putida CSV86]
gi|428762565|gb|EKX84768.1| oligoribonuclease [Pseudomonas putida CSV86]
Length = 180
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++EVL M++W H ASGLT RVR S++ + EA+ R F+ ++V +P+
Sbjct: 45 IAIHHSDEVLARMDDWNTRTHGASGLTQRVRESTIDMAEAEARTIAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|398879981|ref|ZP_10635057.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM67]
gi|398887142|ref|ZP_10641970.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM60]
gi|398185792|gb|EJM73182.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM60]
gi|398194699|gb|EJM81764.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM67]
Length = 180
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++E+L M+EW H SGLT RVR S +S+ EA+ F+ K+V +P+
Sbjct: 45 IAIHHSDEILAGMDEWNTRQHGGSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|406975117|gb|EKD97982.1| hypothetical protein ACD_23C00644G0004 [uncultured bacterium]
Length = 195
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 40/60 (66%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E+L M+ W H SGL D+V+AS+V+ +A++++ +F+A+YV TAPM G
Sbjct: 61 AIHQADELLNKMDAWNKGTHGRSGLIDKVKASAVTEADAEQQILEFLARYVPKGTAPMCG 120
>gi|406036820|ref|ZP_11044184.1| oligoribonuclease [Acinetobacter parvus DSM 16617 = CIP 108168]
Length = 184
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 40/61 (65%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++ +L M+EW + H SGL +RVR S ++ ++ +++ +F+ K+V PK++PM
Sbjct: 47 LAVHQSDLILNAMDEWNTKQHGQSGLIERVRRSKLTAQDVEQQTLEFLKKWVNPKSSPMC 106
Query: 91 G 91
G
Sbjct: 107 G 107
>gi|398889692|ref|ZP_10643471.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM55]
gi|398925242|ref|ZP_10661758.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM48]
gi|398172282|gb|EJM60152.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM48]
gi|398189140|gb|EJM76423.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM55]
Length = 180
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++E+L M+EW H SGLT RVR S +S+ EA+ F+ K+V +P+
Sbjct: 45 IAIHHSDEILAGMDEWNTRQHGGSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|422646550|ref|ZP_16709683.1| oligoribonuclease [Pseudomonas syringae pv. maculicola str. ES4326]
gi|330960097|gb|EGH60357.1| oligoribonuclease [Pseudomonas syringae pv. maculicola str. ES4326]
Length = 178
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT RVR S++S+ EA+ + +F+ +V +++P+
Sbjct: 45 IAVHQSDETLAKMDEWNTRQHGGSGLTQRVRESTISMAEAEAQTLEFIKLWVPERSSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|67524821|ref|XP_660472.1| hypothetical protein AN2868.2 [Aspergillus nidulans FGSC A4]
gi|40744263|gb|EAA63439.1| hypothetical protein AN2868.2 [Aspergillus nidulans FGSC A4]
Length = 802
Score = 52.4 bits (124), Expect = 3e-05, Method: Composition-based stats.
Identities = 25/77 (32%), Positives = 43/77 (55%), Gaps = 2/77 (2%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG-EYH 94
+ L +M++WC++ H +GLT RV+ S+V+ E A L ++ +Y+ KP+TA + G H
Sbjct: 663 QSALDSMSQWCIDTHGRTGLTQRVQNSTVTPEAAAADLLAYIKRYIPKPRTALLAGNSVH 722
Query: 95 TSKELLKDSDHFLVFSW 111
K L + + W
Sbjct: 723 ADKAFLACGPYAAILEW 739
>gi|320352856|ref|YP_004194195.1| Exonuclease RNase T and DNA polymerase III [Desulfobulbus
propionicus DSM 2032]
gi|320121358|gb|ADW16904.1| Exonuclease RNase T and DNA polymerase III [Desulfobulbus
propionicus DSM 2032]
Length = 181
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ EEVL M+ W +HH SGL DRVR S+ + +A+ +F+ ++V + +PM G
Sbjct: 46 AIHQPEEVLAAMDPWNTQHHRESGLIDRVRRSTFTCRQAELETLEFIKQWVDKRVSPMCG 105
>gi|399002332|ref|ZP_10705020.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM18]
gi|398125107|gb|EJM14596.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM18]
Length = 180
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++E+L M+EW H SGLT RVR S +S+ EA+ F+ K+V +P+
Sbjct: 45 IAIHHSDEILAGMDEWNTRQHGGSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|195573238|ref|XP_002104602.1| GD18354 [Drosophila simulans]
gi|194200529|gb|EDX14105.1| GD18354 [Drosophila simulans]
Length = 208
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 23 LQTQGTCKCGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV 82
++++G C + + +EV +MNEWC+E H SGL DR ++S V EEA + ++ K +
Sbjct: 66 VKSEGPC-FAINHPQEVYDSMNEWCMEQHYKSGLIDRCKSSDVKPEEASNLVLSYIEKNI 124
Query: 83 KPKTAPMVG 91
P+ G
Sbjct: 125 PKGVCPLGG 133
>gi|255549210|ref|XP_002515659.1| oligoribonuclease, mitochondrial, putative [Ricinus communis]
gi|223545202|gb|EEF46711.1| oligoribonuclease, mitochondrial, putative [Ricinus communis]
Length = 232
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L+ M EWC HH ASGLT++V S+VS EA+ ++ +FV ++V T + G
Sbjct: 114 IHQSKECLEQMGEWCQSHHAASGLTEKVLQSTVSEREAETQVIEFVKRHVGTYTPLLAG 172
>gi|398911313|ref|ZP_10655439.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM49]
gi|407366814|ref|ZP_11113346.1| oligoribonuclease [Pseudomonas mandelii JR-1]
gi|426407358|ref|YP_007027457.1| oligoribonuclease [Pseudomonas sp. UW4]
gi|398184453|gb|EJM71904.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM49]
gi|426265575|gb|AFY17652.1| oligoribonuclease [Pseudomonas sp. UW4]
Length = 180
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++E+L M+EW H SGLT RVR S +S+ EA+ F+ K+V +P+
Sbjct: 45 IAIHHSDEILAGMDEWNTRQHGGSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|257482419|ref|ZP_05636460.1| oligoribonuclease [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|289623748|ref|ZP_06456702.1| oligoribonuclease [Pseudomonas syringae pv. aesculi str. NCPPB
3681]
gi|289648635|ref|ZP_06479978.1| oligoribonuclease [Pseudomonas syringae pv. aesculi str. 2250]
gi|422581035|ref|ZP_16656179.1| oligoribonuclease [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|422680410|ref|ZP_16738682.1| oligoribonuclease [Pseudomonas syringae pv. tabaci str. ATCC 11528]
gi|330865886|gb|EGH00595.1| oligoribonuclease [Pseudomonas syringae pv. aesculi str. 0893_23]
gi|331009756|gb|EGH89812.1| oligoribonuclease [Pseudomonas syringae pv. tabaci str. ATCC 11528]
Length = 178
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT RVR S++S+ EA+ + +F+ +V +++P+
Sbjct: 45 IAVHQSDETLAKMDEWNTRQHGGSGLTQRVRESTISMAEAEAQTLEFIKLWVPERSSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|410617082|ref|ZP_11328058.1| oligoribonuclease [Glaciecola polaris LMG 21857]
gi|410163351|dbj|GAC32196.1| oligoribonuclease [Glaciecola polaris LMG 21857]
Length = 181
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 39/60 (65%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +++VL NMN+WC++ H SGLT+R + S+++ + A +F+ KYV +P+ G
Sbjct: 47 AIHQSDDVLHNMNQWCIDTHGQSGLTERCQKSTINEQTAVAETIRFLEKYVPKGASPLCG 106
>gi|398902514|ref|ZP_10651081.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM50]
gi|398178424|gb|EJM66074.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM50]
Length = 180
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++E+L M+EW H SGLT RVR S +S+ EA+ F+ K+V +P+
Sbjct: 45 IAIHHSDEILAGMDEWNTRQHGGSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|422587784|ref|ZP_16662454.1| oligoribonuclease [Pseudomonas syringae pv. morsprunorum str.
M302280]
gi|330873800|gb|EGH07949.1| oligoribonuclease [Pseudomonas syringae pv. morsprunorum str.
M302280]
Length = 178
Score = 52.4 bits (124), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT RVR S++S+ EA+ + +F+ +V +++P+
Sbjct: 45 IAVHQSDETLAKMDEWNTRQHGGSGLTQRVRESTISMAEAEAQTLEFIKLWVPERSSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|398857628|ref|ZP_10613326.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM79]
gi|398240455|gb|EJN26132.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM79]
Length = 180
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++E+L M+EW H SGLT RVR S +S+ EA+ F+ K+V +P+
Sbjct: 45 IAIHHSDEILAGMDEWNTRQHGGSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|333367892|ref|ZP_08460122.1| oligoribonuclease [Psychrobacter sp. 1501(2011)]
gi|332978247|gb|EGK14977.1| oligoribonuclease [Psychrobacter sp. 1501(2011)]
Length = 193
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ +++ L M++W + H SGL DRVR S+V++E+A+K +F+ K+V +PM G
Sbjct: 57 AIKVSDQKLNGMDDWNTKQHGQSGLIDRVRRSTVTLEQAEKETIEFLNKWVDEGKSPMCG 116
>gi|260556115|ref|ZP_05828334.1| oligoribonuclease Orn [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
gi|260410170|gb|EEX03469.1| oligoribonuclease Orn [Acinetobacter baumannii ATCC 19606 = CIP
70.34]
Length = 163
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + +L M+EW H SGL +RVR S ++ +A+ + +F+ K+V PK +PM G
Sbjct: 48 AIHQPDRILNAMDEWNTRQHGQSGLIERVRRSKLTARDAELQTLEFLKKWVNPKVSPMCG 107
>gi|390568725|ref|ZP_10249020.1| oligoribonuclease [Burkholderia terrae BS001]
gi|420256224|ref|ZP_14759079.1| oligoribonuclease (3'->5' exoribonuclease) [Burkholderia sp. BT03]
gi|389939329|gb|EIN01163.1| oligoribonuclease [Burkholderia terrae BS001]
gi|398043638|gb|EJL36527.1| oligoribonuclease (3'->5' exoribonuclease) [Burkholderia sp. BT03]
Length = 208
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRVRAS+V+ +A +++ F+ ++V P +PM G
Sbjct: 58 AIHQSDEALGKMDDWNKNTHGRSGLIDRVRASTVTEADATEQIRAFLGQHVPPGKSPMCG 117
>gi|88704503|ref|ZP_01102217.1| oligoribonuclease [Congregibacter litoralis KT71]
gi|88701554|gb|EAQ98659.1| oligoribonuclease [Congregibacter litoralis KT71]
Length = 188
Score = 52.4 bits (124), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ VL+ M+EW HH ASGL DRVRAS + EA + F+ +V +PM G
Sbjct: 50 AIHQSDAVLEAMDEWNTSHHGASGLCDRVRASVIDEAEATRLTIAFLENWVPAGASPMCG 109
>gi|92113396|ref|YP_573324.1| oligoribonuclease [Chromohalobacter salexigens DSM 3043]
gi|91796486|gb|ABE58625.1| Exonuclease [Chromohalobacter salexigens DSM 3043]
Length = 187
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ + +L M+EW H SGLT RVR S + EA+++ F+ +YV P ++PM
Sbjct: 52 LAVHQPDALLAGMDEWNTRTHGDSGLTQRVRESRIDTAEAERQTLAFLKRYVTPNSSPMC 111
Query: 91 G 91
G
Sbjct: 112 G 112
>gi|296314314|ref|ZP_06864255.1| oligoribonuclease [Neisseria polysaccharea ATCC 43768]
gi|296838975|gb|EFH22913.1| oligoribonuclease [Neisseria polysaccharea ATCC 43768]
Length = 187
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L NM+EW H +GLT RVR SS + E +++L F++++V +T PM G
Sbjct: 46 AVHQSDELLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPERTTPMCG 105
>gi|307206938|gb|EFN84782.1| Probable oligoribonuclease [Harpegnathos saltator]
Length = 180
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 37/55 (67%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ +L NM++WC+++H +GL + R+S +S++EA+ + F+ KYV + P+ G
Sbjct: 48 DTILNNMHQWCMKNHKINGLINESRSSKISLKEAETTVLNFLKKYVPKRKCPLAG 102
>gi|260549063|ref|ZP_05823284.1| oligoribonuclease Orn [Acinetobacter sp. RUH2624]
gi|424056986|ref|ZP_17794503.1| oligoribonuclease [Acinetobacter nosocomialis Ab22222]
gi|425741748|ref|ZP_18859887.1| oligoribonuclease [Acinetobacter baumannii WC-487]
gi|445437346|ref|ZP_21440992.1| oligoribonuclease [Acinetobacter baumannii OIFC021]
gi|260407791|gb|EEX01263.1| oligoribonuclease Orn [Acinetobacter sp. RUH2624]
gi|407440519|gb|EKF47036.1| oligoribonuclease [Acinetobacter nosocomialis Ab22222]
gi|425491459|gb|EKU57743.1| oligoribonuclease [Acinetobacter baumannii WC-487]
gi|444753928|gb|ELW78564.1| oligoribonuclease [Acinetobacter baumannii OIFC021]
Length = 188
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ + +L M+EW H SGL +RVR S ++ +A+ + +F+ K+V PK +PM
Sbjct: 47 LAIHQPDRILNAMDEWNTRQHGQSGLIERVRRSKLTARDAELQTLEFLKKWVNPKVSPMC 106
Query: 91 G 91
G
Sbjct: 107 G 107
>gi|161869352|ref|YP_001598519.1| oligoribonuclease [Neisseria meningitidis 053442]
gi|416189072|ref|ZP_11615088.1| oligoribonuclease [Neisseria meningitidis M0579]
gi|421543110|ref|ZP_15989207.1| oligoribonuclease [Neisseria meningitidis NM255]
gi|433469990|ref|ZP_20427397.1| exonuclease family protein [Neisseria meningitidis 98080]
gi|161594905|gb|ABX72565.1| oligoribonuclease [Neisseria meningitidis 053442]
gi|325135642|gb|EGC58259.1| oligoribonuclease [Neisseria meningitidis M0579]
gi|402315316|gb|EJU50880.1| oligoribonuclease [Neisseria meningitidis NM255]
gi|432201220|gb|ELK57303.1| exonuclease family protein [Neisseria meningitidis 98080]
Length = 187
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L NM+EW H +GLT RVR SS + E +++L F++++V +T PM G
Sbjct: 46 AVHQSDELLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPERTTPMCG 105
>gi|169634394|ref|YP_001708130.1| oligoribonuclease [Acinetobacter baumannii SDF]
gi|169797233|ref|YP_001715026.1| oligoribonuclease [Acinetobacter baumannii AYE]
gi|213155973|ref|YP_002318018.1| oligoribonuclease [Acinetobacter baumannii AB0057]
gi|215484674|ref|YP_002326909.1| Oligoribonuclease [Acinetobacter baumannii AB307-0294]
gi|229577105|ref|YP_001083587.2| oligoribonuclease [Acinetobacter baumannii ATCC 17978]
gi|239500755|ref|ZP_04660065.1| oligoribonuclease [Acinetobacter baumannii AB900]
gi|293610306|ref|ZP_06692607.1| oligoribonuclease [Acinetobacter sp. SH024]
gi|301346492|ref|ZP_07227233.1| oligoribonuclease [Acinetobacter baumannii AB056]
gi|301509982|ref|ZP_07235219.1| oligoribonuclease [Acinetobacter baumannii AB058]
gi|301594203|ref|ZP_07239211.1| oligoribonuclease [Acinetobacter baumannii AB059]
gi|332851262|ref|ZP_08433335.1| oligoribonuclease [Acinetobacter baumannii 6013150]
gi|332866131|ref|ZP_08436846.1| oligoribonuclease [Acinetobacter baumannii 6013113]
gi|332874063|ref|ZP_08441998.1| oligoribonuclease [Acinetobacter baumannii 6014059]
gi|375137062|ref|YP_004997712.1| oligoribonuclease [Acinetobacter calcoaceticus PHEA-2]
gi|384130535|ref|YP_005513147.1| oligoribonuclease [Acinetobacter baumannii 1656-2]
gi|384141818|ref|YP_005524528.1| oligoribonuclease [Acinetobacter baumannii MDR-ZJ06]
gi|385236129|ref|YP_005797468.1| oligoribonuclease [Acinetobacter baumannii TCDC-AB0715]
gi|387125225|ref|YP_006291107.1| oligoribonuclease [Acinetobacter baumannii MDR-TJ]
gi|403673361|ref|ZP_10935658.1| oligoribonuclease [Acinetobacter sp. NCTC 10304]
gi|407931465|ref|YP_006847108.1| oligoribonuclease [Acinetobacter baumannii TYTH-1]
gi|416146636|ref|ZP_11601299.1| oligoribonuclease [Acinetobacter baumannii AB210]
gi|417545722|ref|ZP_12196808.1| oligoribonuclease [Acinetobacter baumannii OIFC032]
gi|417547922|ref|ZP_12199003.1| oligoribonuclease [Acinetobacter baumannii Naval-18]
gi|417561975|ref|ZP_12212854.1| oligoribonuclease [Acinetobacter baumannii OIFC137]
gi|417567461|ref|ZP_12218333.1| oligoribonuclease [Acinetobacter baumannii OIFC143]
gi|417570124|ref|ZP_12220981.1| oligoribonuclease [Acinetobacter baumannii OIFC189]
gi|417576015|ref|ZP_12226860.1| exonuclease [Acinetobacter baumannii Naval-17]
gi|417871172|ref|ZP_12516115.1| oligoribonuclease [Acinetobacter baumannii ABNIH1]
gi|417875841|ref|ZP_12520642.1| oligoribonuclease [Acinetobacter baumannii ABNIH2]
gi|417879665|ref|ZP_12524222.1| oligoribonuclease [Acinetobacter baumannii ABNIH3]
gi|417882170|ref|ZP_12526478.1| oligoribonuclease [Acinetobacter baumannii ABNIH4]
gi|421201827|ref|ZP_15658982.1| oligoribonuclease [Acinetobacter baumannii AC12]
gi|421535247|ref|ZP_15981509.1| oligoribonuclease [Acinetobacter baumannii AC30]
gi|421620763|ref|ZP_16061692.1| oligoribonuclease [Acinetobacter baumannii OIFC074]
gi|421625659|ref|ZP_16066505.1| oligoribonuclease [Acinetobacter baumannii OIFC098]
gi|421630520|ref|ZP_16071223.1| oligoribonuclease [Acinetobacter baumannii OIFC180]
gi|421642834|ref|ZP_16083345.1| oligoribonuclease [Acinetobacter baumannii IS-235]
gi|421655113|ref|ZP_16095437.1| oligoribonuclease [Acinetobacter baumannii Naval-72]
gi|421659366|ref|ZP_16099587.1| oligoribonuclease [Acinetobacter baumannii Naval-83]
gi|421666450|ref|ZP_16106542.1| oligoribonuclease [Acinetobacter baumannii OIFC087]
gi|421671044|ref|ZP_16111026.1| oligoribonuclease [Acinetobacter baumannii OIFC099]
gi|421688366|ref|ZP_16128066.1| oligoribonuclease [Acinetobacter baumannii IS-143]
gi|421692430|ref|ZP_16132081.1| oligoribonuclease [Acinetobacter baumannii IS-116]
gi|421697927|ref|ZP_16137471.1| oligoribonuclease [Acinetobacter baumannii IS-58]
gi|421702265|ref|ZP_16141750.1| oligoribonuclease [Acinetobacter baumannii ZWS1122]
gi|421706004|ref|ZP_16145425.1| oligoribonuclease [Acinetobacter baumannii ZWS1219]
gi|421789295|ref|ZP_16225557.1| oligoribonuclease [Acinetobacter baumannii Naval-82]
gi|421798316|ref|ZP_16234341.1| oligoribonuclease [Acinetobacter baumannii Naval-21]
gi|421798768|ref|ZP_16234779.1| oligoribonuclease [Acinetobacter baumannii Canada BC1]
gi|421808086|ref|ZP_16243943.1| oligoribonuclease [Acinetobacter baumannii OIFC035]
gi|424053710|ref|ZP_17791241.1| oligoribonuclease [Acinetobacter baumannii Ab11111]
gi|424061175|ref|ZP_17798665.1| oligoribonuclease [Acinetobacter baumannii Ab33333]
gi|424064647|ref|ZP_17802131.1| oligoribonuclease [Acinetobacter baumannii Ab44444]
gi|425749324|ref|ZP_18867304.1| oligoribonuclease [Acinetobacter baumannii WC-348]
gi|427423096|ref|ZP_18913262.1| oligoribonuclease [Acinetobacter baumannii WC-136]
gi|445400148|ref|ZP_21429798.1| oligoribonuclease [Acinetobacter baumannii Naval-57]
gi|445446837|ref|ZP_21443468.1| oligoribonuclease [Acinetobacter baumannii WC-A-92]
gi|445458103|ref|ZP_21446927.1| oligoribonuclease [Acinetobacter baumannii OIFC047]
gi|445465200|ref|ZP_21449978.1| oligoribonuclease [Acinetobacter baumannii OIFC338]
gi|445486181|ref|ZP_21457239.1| oligoribonuclease [Acinetobacter baumannii AA-014]
gi|169150160|emb|CAM88054.1| oligoribonuclease [Acinetobacter baumannii AYE]
gi|169153186|emb|CAP02276.1| oligoribonuclease [Acinetobacter baumannii]
gi|193076335|gb|ABO10985.2| oligoribonuclease [Acinetobacter baumannii ATCC 17978]
gi|213055133|gb|ACJ40035.1| oligoribonuclease Orn [Acinetobacter baumannii AB0057]
gi|213985933|gb|ACJ56232.1| Oligoribonuclease [Acinetobacter baumannii AB307-0294]
gi|292827538|gb|EFF85902.1| oligoribonuclease [Acinetobacter sp. SH024]
gi|322506755|gb|ADX02209.1| Oligoribonuclease [Acinetobacter baumannii 1656-2]
gi|323516626|gb|ADX91007.1| oligoribonuclease [Acinetobacter baumannii TCDC-AB0715]
gi|325124507|gb|ADY84030.1| oligoribonuclease [Acinetobacter calcoaceticus PHEA-2]
gi|332730142|gb|EGJ61469.1| oligoribonuclease [Acinetobacter baumannii 6013150]
gi|332734772|gb|EGJ65866.1| oligoribonuclease [Acinetobacter baumannii 6013113]
gi|332737804|gb|EGJ68696.1| oligoribonuclease [Acinetobacter baumannii 6014059]
gi|333366017|gb|EGK48031.1| oligoribonuclease [Acinetobacter baumannii AB210]
gi|342224673|gb|EGT89697.1| oligoribonuclease [Acinetobacter baumannii ABNIH2]
gi|342225993|gb|EGT90969.1| oligoribonuclease [Acinetobacter baumannii ABNIH1]
gi|342227763|gb|EGT92676.1| oligoribonuclease [Acinetobacter baumannii ABNIH3]
gi|342238419|gb|EGU02852.1| oligoribonuclease [Acinetobacter baumannii ABNIH4]
gi|347592311|gb|AEP05032.1| oligoribonuclease [Acinetobacter baumannii MDR-ZJ06]
gi|385879717|gb|AFI96812.1| oligoribonuclease (3'->5' exoribonuclease) [Acinetobacter baumannii
MDR-TJ]
gi|395524557|gb|EJG12646.1| oligoribonuclease [Acinetobacter baumannii OIFC137]
gi|395550572|gb|EJG16581.1| oligoribonuclease [Acinetobacter baumannii OIFC189]
gi|395553133|gb|EJG19141.1| oligoribonuclease [Acinetobacter baumannii OIFC143]
gi|395569236|gb|EJG29898.1| exonuclease [Acinetobacter baumannii Naval-17]
gi|398328712|gb|EJN44835.1| oligoribonuclease [Acinetobacter baumannii AC12]
gi|400383610|gb|EJP42288.1| oligoribonuclease [Acinetobacter baumannii OIFC032]
gi|400388221|gb|EJP51293.1| oligoribonuclease [Acinetobacter baumannii Naval-18]
gi|404559716|gb|EKA64967.1| oligoribonuclease [Acinetobacter baumannii IS-116]
gi|404561109|gb|EKA66345.1| oligoribonuclease [Acinetobacter baumannii IS-143]
gi|404572973|gb|EKA78013.1| oligoribonuclease [Acinetobacter baumannii IS-58]
gi|404666857|gb|EKB34787.1| oligoribonuclease [Acinetobacter baumannii Ab33333]
gi|404667196|gb|EKB35117.1| oligoribonuclease [Acinetobacter baumannii Ab11111]
gi|404672730|gb|EKB40534.1| oligoribonuclease [Acinetobacter baumannii Ab44444]
gi|407195028|gb|EKE66164.1| oligoribonuclease [Acinetobacter baumannii ZWS1122]
gi|407195417|gb|EKE66551.1| oligoribonuclease [Acinetobacter baumannii ZWS1219]
gi|407900046|gb|AFU36877.1| oligoribonuclease [Acinetobacter baumannii TYTH-1]
gi|408509250|gb|EKK10925.1| oligoribonuclease [Acinetobacter baumannii Naval-72]
gi|408511400|gb|EKK13048.1| oligoribonuclease [Acinetobacter baumannii IS-235]
gi|408697373|gb|EKL42887.1| oligoribonuclease [Acinetobacter baumannii OIFC180]
gi|408697753|gb|EKL43259.1| oligoribonuclease [Acinetobacter baumannii OIFC098]
gi|408700040|gb|EKL45512.1| oligoribonuclease [Acinetobacter baumannii OIFC074]
gi|408708077|gb|EKL53355.1| oligoribonuclease [Acinetobacter baumannii Naval-83]
gi|409986800|gb|EKO42991.1| oligoribonuclease [Acinetobacter baumannii AC30]
gi|410383341|gb|EKP35874.1| oligoribonuclease [Acinetobacter baumannii OIFC099]
gi|410388375|gb|EKP40814.1| oligoribonuclease [Acinetobacter baumannii OIFC087]
gi|410394902|gb|EKP47226.1| oligoribonuclease [Acinetobacter baumannii Naval-21]
gi|410399225|gb|EKP51422.1| oligoribonuclease [Acinetobacter baumannii Naval-82]
gi|410411417|gb|EKP63288.1| oligoribonuclease [Acinetobacter baumannii Canada BC1]
gi|410416265|gb|EKP68040.1| oligoribonuclease [Acinetobacter baumannii OIFC035]
gi|425489397|gb|EKU55709.1| oligoribonuclease [Acinetobacter baumannii WC-348]
gi|425700196|gb|EKU69787.1| oligoribonuclease [Acinetobacter baumannii WC-136]
gi|444759779|gb|ELW84241.1| oligoribonuclease [Acinetobacter baumannii WC-A-92]
gi|444769666|gb|ELW93834.1| oligoribonuclease [Acinetobacter baumannii AA-014]
gi|444775747|gb|ELW99803.1| oligoribonuclease [Acinetobacter baumannii OIFC047]
gi|444779332|gb|ELX03326.1| oligoribonuclease [Acinetobacter baumannii OIFC338]
gi|444783530|gb|ELX07389.1| oligoribonuclease [Acinetobacter baumannii Naval-57]
gi|452955794|gb|EME61191.1| oligoribonuclease [Acinetobacter baumannii MSP4-16]
Length = 188
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ + +L M+EW H SGL +RVR S ++ +A+ + +F+ K+V PK +PM
Sbjct: 47 LAIHQPDRILNAMDEWNTRQHGQSGLIERVRRSKLTARDAELQTLEFLKKWVNPKVSPMC 106
Query: 91 G 91
G
Sbjct: 107 G 107
>gi|448079422|ref|XP_004194382.1| Piso0_004872 [Millerozyma farinosa CBS 7064]
gi|359375804|emb|CCE86386.1| Piso0_004872 [Millerozyma farinosa CBS 7064]
Length = 287
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/62 (41%), Positives = 39/62 (62%), Gaps = 5/62 (8%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRV---RASSVSIEEADKRLHQFVAKYVKPKTAPM 89
+YY +E L MNEWCV H SGLT ++ +S++ I E++ L +++ KYV+P A M
Sbjct: 129 VYYPKETLDAMNEWCVNQHGKSGLTAKILDDPSSTLQIVESN--LLEYIKKYVEPNKAVM 186
Query: 90 VG 91
G
Sbjct: 187 AG 188
>gi|388567818|ref|ZP_10154248.1| oligoribonuclease [Hydrogenophaga sp. PBC]
gi|388265147|gb|EIK90707.1| oligoribonuclease [Hydrogenophaga sp. PBC]
Length = 195
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 39/59 (66%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ VL M+ W H SGL D+VRAS+VS EA+++L F+A+YV + +P+ G
Sbjct: 63 VHQSDAVLDAMDAWNKGTHGRSGLIDKVRASAVSEAEAEQQLIDFIARYVPKQASPLCG 121
>gi|262280955|ref|ZP_06058738.1| oligoribonuclease [Acinetobacter calcoaceticus RUH2202]
gi|262257855|gb|EEY76590.1| oligoribonuclease [Acinetobacter calcoaceticus RUH2202]
Length = 188
Score = 52.0 bits (123), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ +L M+EW H SGL +RVR S ++ +A+ + +F+ K+V PK +PM G
Sbjct: 53 DRILNAMDEWNTRQHGQSGLVERVRRSKLTARDAELQTLEFLKKWVNPKVSPMCG 107
>gi|356501364|ref|XP_003519495.1| PREDICTED: oligoribonuclease-like [Glycine max]
Length = 241
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/50 (46%), Positives = 34/50 (68%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV 82
++ +E L M EWC HH ASGLT +V S++S EA+K++ +FV +YV
Sbjct: 101 IHQTKECLDRMGEWCQSHHAASGLTKKVLKSTISEGEAEKQVIEFVKRYV 150
>gi|330807223|ref|YP_004351685.1| Oligoribonuclease [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|423695053|ref|ZP_17669543.1| oligoribonuclease [Pseudomonas fluorescens Q8r1-96]
gi|327375331|gb|AEA66681.1| Oligoribonuclease [Pseudomonas brassicacearum subsp. brassicacearum
NFM421]
gi|388009444|gb|EIK70695.1| oligoribonuclease [Pseudomonas fluorescens Q8r1-96]
Length = 180
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++E+L M+EW H SGLT RVR S +S+ EA+ + F+ ++V +P+
Sbjct: 45 IAIHHSDEILAGMDEWNTRQHGGSGLTQRVRESKISMAEAEAQTIAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|424743244|ref|ZP_18171557.1| oligoribonuclease [Acinetobacter baumannii WC-141]
gi|422943505|gb|EKU38521.1| oligoribonuclease [Acinetobacter baumannii WC-141]
Length = 188
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ +L M+EW H SGL +RVR S ++ +A+ + +F+ K+V PK +PM G
Sbjct: 53 DRILNAMDEWNTRQHGQSGLVERVRRSKLTARDAELQTLEFLKKWVNPKVSPMCG 107
>gi|410693103|ref|YP_003623724.1| oligoribonuclease [Thiomonas sp. 3As]
gi|294339527|emb|CAZ87886.1| oligoribonuclease [Thiomonas sp. 3As]
Length = 203
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ VL M+ W H SGLTDRVRAS+V +A K + F+ KYV +PM G
Sbjct: 58 AIHQSDAVLAGMDAWNQNTHGKSGLTDRVRASTVDEAQASKAIIAFLKKYVPAGKSPMCG 117
>gi|332373288|gb|AEE61785.1| unknown [Dendroctonus ponderosae]
Length = 220
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+E L NM+EWCV+ H +GLT+ S S+E+A+ + F+ +V P +P+ G
Sbjct: 89 KETLDNMHEWCVKQHGKTGLTEACLKSQTSLEQAEDSIMDFLRAHVTPHCSPLAG 143
>gi|334132014|ref|ZP_08505776.1| Pligoribonuclease [Methyloversatilis universalis FAM5]
gi|333443487|gb|EGK71452.1| Pligoribonuclease [Methyloversatilis universalis FAM5]
Length = 182
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 40/59 (67%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++EVL M++W H SGLTDRVRAS++ A+ ++ F+++YV +++P+ G
Sbjct: 48 VHQSDEVLNGMDKWNTSTHGKSGLTDRVRASTLDEAAAEAQMIAFLSQYVPERSSPICG 106
>gi|184156861|ref|YP_001845200.1| oligoribonuclease [Acinetobacter baumannii ACICU]
gi|417553595|ref|ZP_12204664.1| oligoribonuclease [Acinetobacter baumannii Naval-81]
gi|417571742|ref|ZP_12222596.1| oligoribonuclease [Acinetobacter baumannii Canada BC-5]
gi|421201160|ref|ZP_15658319.1| oligoribonuclease [Acinetobacter baumannii OIFC109]
gi|421454215|ref|ZP_15903564.1| oligoribonuclease [Acinetobacter baumannii IS-123]
gi|421634167|ref|ZP_16074786.1| oligoribonuclease [Acinetobacter baumannii Naval-13]
gi|421649334|ref|ZP_16089729.1| oligoribonuclease [Acinetobacter baumannii IS-251]
gi|421651131|ref|ZP_16091503.1| oligoribonuclease [Acinetobacter baumannii OIFC0162]
gi|421662258|ref|ZP_16102426.1| oligoribonuclease [Acinetobacter baumannii OIFC110]
gi|421675829|ref|ZP_16115748.1| oligoribonuclease [Acinetobacter baumannii OIFC065]
gi|421677528|ref|ZP_16117420.1| oligoribonuclease [Acinetobacter baumannii OIFC111]
gi|421693788|ref|ZP_16133420.1| oligoribonuclease [Acinetobacter baumannii WC-692]
gi|421792311|ref|ZP_16228466.1| oligoribonuclease [Acinetobacter baumannii Naval-2]
gi|421805678|ref|ZP_16241554.1| oligoribonuclease [Acinetobacter baumannii WC-A-694]
gi|425751574|ref|ZP_18869519.1| oligoribonuclease [Acinetobacter baumannii Naval-113]
gi|445481549|ref|ZP_21455993.1| oligoribonuclease [Acinetobacter baumannii Naval-78]
gi|183208455|gb|ACC55853.1| Oligoribonuclease (3'->5' exoribonuclease) [Acinetobacter
baumannii ACICU]
gi|395563192|gb|EJG24845.1| oligoribonuclease [Acinetobacter baumannii OIFC109]
gi|400207310|gb|EJO38280.1| oligoribonuclease [Acinetobacter baumannii Canada BC-5]
gi|400212982|gb|EJO43939.1| oligoribonuclease [Acinetobacter baumannii IS-123]
gi|400390012|gb|EJP57059.1| oligoribonuclease [Acinetobacter baumannii Naval-81]
gi|404569627|gb|EKA74712.1| oligoribonuclease [Acinetobacter baumannii WC-692]
gi|408509143|gb|EKK10819.1| oligoribonuclease [Acinetobacter baumannii OIFC0162]
gi|408514107|gb|EKK15719.1| oligoribonuclease [Acinetobacter baumannii IS-251]
gi|408704885|gb|EKL50241.1| oligoribonuclease [Acinetobacter baumannii Naval-13]
gi|408715061|gb|EKL60191.1| oligoribonuclease [Acinetobacter baumannii OIFC110]
gi|410381346|gb|EKP33912.1| oligoribonuclease [Acinetobacter baumannii OIFC065]
gi|410393284|gb|EKP45638.1| oligoribonuclease [Acinetobacter baumannii OIFC111]
gi|410400618|gb|EKP52786.1| oligoribonuclease [Acinetobacter baumannii Naval-2]
gi|410407940|gb|EKP59915.1| oligoribonuclease [Acinetobacter baumannii WC-A-694]
gi|425500021|gb|EKU66049.1| oligoribonuclease [Acinetobacter baumannii Naval-113]
gi|444770341|gb|ELW94498.1| oligoribonuclease [Acinetobacter baumannii Naval-78]
Length = 173
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ + +L M+EW H SGL +RVR S ++ +A+ + +F+ K+V PK +PM
Sbjct: 32 LAIHQPDRILNAMDEWNTRQHGQSGLIERVRRSKLTARDAELQTLEFLKKWVNPKVSPMC 91
Query: 91 G 91
G
Sbjct: 92 G 92
>gi|363748660|ref|XP_003644548.1| hypothetical protein Ecym_1507 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888180|gb|AET37731.1| hypothetical protein Ecym_1507 [Eremothecium cymbalariae
DBVPG#7215]
Length = 365
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++Y++ VL +MNEWC+E H SGLT +V S + E+ ++ L ++ KY+ +P+ + G
Sbjct: 154 VHYDKAVLDSMNEWCIEQHGNSGLTAKVLESKKTREQVEEELLAYIKKYIPEPRKGILAG 213
>gi|302758050|ref|XP_002962448.1| hypothetical protein SELMODRAFT_141141 [Selaginella moellendorffii]
gi|300169309|gb|EFJ35911.1| hypothetical protein SELMODRAFT_141141 [Selaginella moellendorffii]
Length = 236
Score = 52.0 bits (123), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L+ M EWC HH ASGLT+RV+ S V+ A+ + +FV KY A + G
Sbjct: 100 IHQSDEILKGMGEWCQTHHAASGLTERVQNSKVTEAHAEMLVLKFVQKYTIAGYAQLAG 158
>gi|359319460|ref|XP_546513.4| PREDICTED: LOW QUALITY PROTEIN: oligoribonuclease, mitochondrial
[Canis lupus familiaris]
Length = 237
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/65 (35%), Positives = 38/65 (58%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC EHH SGLT V+ S+++ ++A+ FV + P P+ G H
Sbjct: 87 DELLDSMSDWCKEHHGKSGLTKAVKESTMTXQQAEYEFLSFVRQQTSPGLCPLAGNSVHA 146
Query: 96 SKELL 100
K+ L
Sbjct: 147 DKKFL 151
>gi|334143347|ref|YP_004536503.1| oligoribonuclease [Thioalkalimicrobium cyclicum ALM1]
gi|333964258|gb|AEG31024.1| Oligoribonuclease [Thioalkalimicrobium cyclicum ALM1]
Length = 181
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
E L M+ WC + H ASGLT RV+AS V++ EA++ +F++++V +PM G
Sbjct: 51 EAELAKMDAWCQKTHGASGLTARVQASKVTLAEAEQATVEFLSQFVSKGQSPMCG 105
>gi|87121900|ref|ZP_01077785.1| oligoribonuclease [Marinomonas sp. MED121]
gi|86162698|gb|EAQ63978.1| oligoribonuclease [Marinomonas sp. MED121]
Length = 183
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/53 (41%), Positives = 32/53 (60%)
Query: 39 VLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
V+ M+EWC HH SGLT RV + +S+ +A+ QF+ KYV +P+ G
Sbjct: 54 VMDAMDEWCTSHHGQSGLTKRVLETQMSMSQAELETIQFLEKYVPKGVSPICG 106
>gi|50086122|ref|YP_047632.1| oligoribonuclease [Acinetobacter sp. ADP1]
gi|59798028|sp|Q6F805.1|ORN_ACIAD RecName: Full=Oligoribonuclease
gi|49532098|emb|CAG69810.1| oligoribonuclease [Acinetobacter sp. ADP1]
Length = 183
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ +L M+EW H SGL +RVR S ++ + + + +F+ K+V PKT+PM G
Sbjct: 53 DRILNAMDEWNTRQHGQSGLIERVRRSKLTARDVELQTLEFLKKWVNPKTSPMCG 107
>gi|340384293|ref|XP_003390648.1| PREDICTED: oligoribonuclease-like [Amphimedon queenslandica]
Length = 191
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 31/53 (58%)
Query: 39 VLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+L M+EW H SGL DRV AS +A++R F+ +YV PK +PM G
Sbjct: 54 LLDTMDEWNTRQHRRSGLVDRVLASDCDSAQAEERTLAFLRRYVPPKASPMCG 106
>gi|260774665|ref|ZP_05883570.1| oligoribonuclease [Vibrio coralliilyticus ATCC BAA-450]
gi|260609384|gb|EEX35533.1| oligoribonuclease [Vibrio coralliilyticus ATCC BAA-450]
Length = 167
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ EE L M+EWC H SGL DRVRAS V+ ++A ++ +F+ +++ +P+ G
Sbjct: 33 AIHQPEEELAKMDEWCTTTHTGSGLVDRVRASKVTEQDAVRQTIEFLEQWLPKGVSPICG 92
>gi|254489693|ref|ZP_05102889.1| exonuclease superfamily [Methylophaga thiooxidans DMS010]
gi|224465102|gb|EEF81355.1| exonuclease superfamily [Methylophaga thiooxydans DMS010]
Length = 185
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + +L +M+EW H SGLT RV+ S+V+ EA+++ +F+ KYV +PM G
Sbjct: 47 AIHQQDAILDSMDEWNTRQHGKSGLTQRVKDSTVTEAEAEQKTIEFLRKYVPAGVSPMCG 106
>gi|152981086|ref|YP_001352542.1| oligoribonuclease [Janthinobacterium sp. Marseille]
gi|151281163|gb|ABR89573.1| oligoribonuclease protein [Janthinobacterium sp. Marseille]
Length = 195
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++EVL M+ W H SGL DR++AS+V+ EA+ L +F+ KYV +PM G
Sbjct: 61 AIHQSDEVLDGMDAWNKGTHGRSGLIDRIKASTVTEAEAETALIEFLKKYVPSGKSPMCG 120
>gi|418465483|ref|ZP_13036419.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans RhAA1]
gi|359755964|gb|EHK90124.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans RhAA1]
Length = 182
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +E+L M+EWCV+ H A+GL +RV+AS ++ A+ + F+ KYV +P+
Sbjct: 46 LAIHQPDELLNKMSEWCVKTHTANGLIERVKASKLTKRAAELQTLDFLKKYVPKGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|302815434|ref|XP_002989398.1| hypothetical protein SELMODRAFT_229455 [Selaginella moellendorffii]
gi|300142792|gb|EFJ09489.1| hypothetical protein SELMODRAFT_229455 [Selaginella moellendorffii]
Length = 236
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L+ M EWC HH ASGLT+RV+ S V+ A+ + +FV KY A + G
Sbjct: 100 IHQSDEILKGMGEWCQTHHAASGLTERVQNSKVTEAHAEMLVLKFVQKYTIAGYAQLAG 158
>gi|187924944|ref|YP_001896586.1| oligoribonuclease [Burkholderia phytofirmans PsJN]
gi|187716138|gb|ACD17362.1| Exonuclease RNase T and DNA polymerase III [Burkholderia
phytofirmans PsJN]
Length = 203
Score = 51.6 bits (122), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRV+AS+VS +A +++ F++ +V P +PM G
Sbjct: 59 AIHQSDETLAKMDQWNQNTHGRSGLIDRVKASTVSEADAAEQIRDFLSVFVPPGKSPMCG 118
>gi|392552530|ref|ZP_10299667.1| oligoribonuclease [Pseudoalteromonas spongiae UST010723-006]
Length = 181
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/61 (40%), Positives = 35/61 (57%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++EVL M+EWC H SGLT+RVR S S E A + F+ K+V +PM
Sbjct: 46 IAVHQSDEVLAGMDEWCTNQHGNSGLTERVRKSKHSEEMAIRETIAFLEKWVPKGVSPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|322801322|gb|EFZ22009.1| hypothetical protein SINV_80878 [Solenopsis invicta]
Length = 198
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+Y +++VLQNM++WC H SGL D R S ++ EA + +F+ +V T P+ G
Sbjct: 64 IYQSDKVLQNMSDWCKLQHKKSGLIDECRLSKTTLAEAQDKTTRFLENHVPRGTCPLAG 122
>gi|422594260|ref|ZP_16668551.1| oligoribonuclease [Pseudomonas syringae pv. lachrymans str.
M301315]
gi|330984568|gb|EGH82671.1| oligoribonuclease [Pseudomonas syringae pv. lachrymans str.
M301315]
Length = 178
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT RVR S++S+ EA+ +F+ +V +++P+
Sbjct: 45 IAVHQSDETLAKMDEWNTRQHGGSGLTQRVRESTISMAEAEAHTLEFIKLWVPERSSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|421163548|ref|ZP_15622255.1| oligoribonuclease [Pseudomonas aeruginosa ATCC 25324]
gi|421170769|ref|ZP_15628694.1| oligoribonuclease [Pseudomonas aeruginosa ATCC 700888]
gi|404522428|gb|EKA32931.1| oligoribonuclease [Pseudomonas aeruginosa ATCC 700888]
gi|404528434|gb|EKA38527.1| oligoribonuclease [Pseudomonas aeruginosa ATCC 25324]
Length = 180
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ EE+L M+EW H SGL RVR S+VS+ EA+ + F+ ++V +++P+
Sbjct: 45 IAIHQPEEILAGMDEWNTRQHGQSGLMQRVRESTVSMAEAEAQTLAFLEQWVPKRSSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|423097812|ref|ZP_17085608.1| oligoribonuclease [Pseudomonas fluorescens Q2-87]
gi|397886111|gb|EJL02594.1| oligoribonuclease [Pseudomonas fluorescens Q2-87]
Length = 180
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++E+L M+EW H SGLT RVR S +S+ EA+ + F+ ++V +P+
Sbjct: 45 IAIHHSDEILAGMDEWNTRQHGGSGLTQRVRDSKISMAEAEAQTIAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|257056841|ref|YP_003134673.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
viridis DSM 43017]
gi|256586713|gb|ACU97846.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
viridis DSM 43017]
Length = 202
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 42/60 (70%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++ ++E L NM + E H SGLT+ VR S++++EEA++R ++ ++V +PKTAP+ G
Sbjct: 45 IHADDEALANMPDVVREMHARSGLTEEVRRSTMTLEEAERRALAYIREHVPEPKTAPLAG 104
>gi|424034280|ref|ZP_17773686.1| oligoribonuclease [Vibrio cholerae HENC-01]
gi|424039377|ref|ZP_17777759.1| oligoribonuclease [Vibrio cholerae HENC-02]
gi|408873104|gb|EKM12308.1| oligoribonuclease [Vibrio cholerae HENC-01]
gi|408893055|gb|EKM30370.1| oligoribonuclease [Vibrio cholerae HENC-02]
Length = 181
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 34/55 (61%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
EE L M++WC H ASGL DRVR S VS ++A + +F+ K+V +P+ G
Sbjct: 52 EEELAKMDDWCTNTHTASGLVDRVRNSDVSEQDAVAQTIEFLEKWVPKGVSPICG 106
>gi|167625547|ref|YP_001675841.1| oligoribonuclease [Shewanella halifaxensis HAW-EB4]
gi|167355569|gb|ABZ78182.1| Exonuclease RNase T and DNA polymerase III [Shewanella halifaxensis
HAW-EB4]
Length = 181
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 41/67 (61%), Gaps = 1/67 (1%)
Query: 25 TQGTCKCGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKP 84
QG +Y ++E L M++W +HH SGL DRV+AS+ + E+A ++ F+++YV
Sbjct: 41 AQGPV-IAIYQSDEQLALMDDWNQKHHGESGLVDRVKASTTNEEQAIEQTIAFLSQYVPA 99
Query: 85 KTAPMVG 91
+PM G
Sbjct: 100 GVSPMCG 106
>gi|340793758|ref|YP_004759221.1| hypothetical protein CVAR_0795 [Corynebacterium variabile DSM
44702]
gi|340533668|gb|AEK36148.1| hypothetical protein CVAR_0795 [Corynebacterium variabile DSM
44702]
Length = 209
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 48/81 (59%), Gaps = 6/81 (7%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK-TAPMVG 91
++ E+ L M+++ H +SGLTD +RASSVS+ +A+KR+ +++ ++V AP+ G
Sbjct: 52 IHATEDELAEMDDFVTNMHGSSGLTDEIRASSVSVADAEKRVVEYIRRFVASSGVAPLCG 111
Query: 92 EYHTSK-----ELLKDSDHFL 107
S + + D D+FL
Sbjct: 112 NSIASDRKFIAKYMPDLDNFL 132
>gi|167563592|ref|ZP_02356508.1| oligoribonuclease [Burkholderia oklahomensis EO147]
gi|167570756|ref|ZP_02363630.1| oligoribonuclease [Burkholderia oklahomensis C6786]
Length = 201
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRVRAS+V+ +A ++ F+ ++V P +PM G
Sbjct: 59 AIHQSDETLAKMDDWNKNTHGRSGLIDRVRASTVTEADAAAQIEAFLGQHVPPGKSPMCG 118
>gi|167035943|ref|YP_001671174.1| oligoribonuclease [Pseudomonas putida GB-1]
gi|166862431|gb|ABZ00839.1| Exonuclease RNase T and DNA polymerase III [Pseudomonas putida
GB-1]
Length = 180
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++++++VL M+EW H ASGLT RVR S VS+ EA+ + F+ ++V +P+
Sbjct: 45 IAIHHSDDVLARMDEWNTRTHGASGLTQRVRESKVSMAEAEAQTIAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|429744488|ref|ZP_19277971.1| oligoribonuclease [Neisseria sp. oral taxon 020 str. F0370]
gi|429162692|gb|EKY04989.1| oligoribonuclease [Neisseria sp. oral taxon 020 str. F0370]
Length = 173
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 38/59 (64%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+EW H +GLT+RVR S ++ E +++L F+A ++ K +PM G
Sbjct: 36 IHQSDEILNAMDEWNTATHGRTGLTERVRQSQLTEAEVEQKLLDFIAAWIPEKASPMCG 94
>gi|269469132|gb|EEZ80677.1| oligoribonuclease [uncultured SUP05 cluster bacterium]
Length = 180
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 39 VLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+L M+EW EHH +SGL R++ S +S ++A+ + +F+ KYV +PM G
Sbjct: 53 LLAGMDEWNTEHHTSSGLVKRIQESDISTKQAEIQTIEFLKKYVNAGVSPMCG 105
>gi|170723851|ref|YP_001751539.1| oligoribonuclease [Pseudomonas putida W619]
gi|169761854|gb|ACA75170.1| Exonuclease RNase T and DNA polymerase III [Pseudomonas putida
W619]
Length = 180
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++EVL M+EW H SGLT RVR S VS+ EA+ + F+ ++V +P+
Sbjct: 45 IAIHHSDEVLARMDEWNTRTHGGSGLTQRVRESKVSMAEAEAQTIAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|328791793|ref|XP_624063.2| PREDICTED: probable oligoribonuclease-like [Apis mellifera]
Length = 144
Score = 51.6 bits (122), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%)
Query: 39 VLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
VL++MNEWC+ H SGL + S ++++ A++ L F+ KY+ +T P+ G
Sbjct: 55 VLEHMNEWCMNFHTKSGLVQESKYSKITLKVAEEMLLNFLKKYIPSQTCPLAG 107
>gi|407714361|ref|YP_006834926.1| oligoribonuclease [Burkholderia phenoliruptrix BR3459a]
gi|407236545|gb|AFT86744.1| oligoribonuclease [Burkholderia phenoliruptrix BR3459a]
Length = 203
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRV+AS+VS +A + F+ YV P +PM G
Sbjct: 59 AIHQSDETLAKMDQWNQNTHGRSGLIDRVKASTVSEADATVLIRDFLGAYVPPGKSPMCG 118
>gi|398846720|ref|ZP_10603679.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM84]
gi|398252283|gb|EJN37481.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM84]
Length = 180
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++EVL M+EW H SGLT RVR S VS+ EA+ + F+ ++V +P+
Sbjct: 45 IAIHHSDEVLARMDEWNTRTHGGSGLTQRVRESKVSMAEAEAQTIAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|307730586|ref|YP_003907810.1| Exonuclease RNase T and DNA polymerase III [Burkholderia sp.
CCGE1003]
gi|307585121|gb|ADN58519.1| Exonuclease RNase T and DNA polymerase III [Burkholderia sp.
CCGE1003]
Length = 203
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRV+AS+VS +A + F+ YV P +PM G
Sbjct: 59 AIHQSDETLARMDQWNQNTHGRSGLIDRVKASTVSEADATVLIRDFLGAYVPPGKSPMCG 118
>gi|410638333|ref|ZP_11348897.1| oligoribonuclease [Glaciecola lipolytica E3]
gi|410142253|dbj|GAC16102.1| oligoribonuclease [Glaciecola lipolytica E3]
Length = 181
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + +VL NM+ WC++ H SGLT+R R S + A K+ F+ KYV +P+ G
Sbjct: 47 AIHQSNDVLDNMDAWCIDVHGKSGLTERCRTSDIDENTAVKQTIAFLEKYVPAGISPLCG 106
>gi|323526920|ref|YP_004229073.1| Exonuclease RNase T and DNA polymerase III [Burkholderia sp.
CCGE1001]
gi|323383922|gb|ADX56013.1| Exonuclease RNase T and DNA polymerase III [Burkholderia sp.
CCGE1001]
Length = 203
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRV+AS+VS +A + F+ YV P +PM G
Sbjct: 59 AIHQSDETLAKMDQWNQNTHGRSGLIDRVKASTVSEADATVLIRDFLGAYVPPGKSPMCG 118
>gi|308048230|ref|YP_003911796.1| Exonuclease RNase T and DNA polymerase III [Ferrimonas balearica
DSM 9799]
gi|307630420|gb|ADN74722.1| Exonuclease RNase T and DNA polymerase III [Ferrimonas balearica
DSM 9799]
Length = 181
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ E L M+EW V H SGLT+RVRAS V + EA+++ F+A++V +P+
Sbjct: 46 LAVHQPESELAKMDEWNVRTHGNSGLTERVRASKVDMAEAERQTLAFLAEWVPAGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|444376994|ref|ZP_21176231.1| 3'-to-5' oligoribonuclease (orn) [Enterovibrio sp. AK16]
gi|443678879|gb|ELT85542.1| 3'-to-5' oligoribonuclease (orn) [Enterovibrio sp. AK16]
Length = 181
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M+EWC H SGL DRV+AS+VS +A K+ F+ +V +P+ G
Sbjct: 47 AIHQSDEELAKMDEWCTNTHTGSGLVDRVKASTVSETDAIKQTIAFLQDWVPAGVSPICG 106
>gi|410091829|ref|ZP_11288377.1| oligoribonuclease [Pseudomonas viridiflava UASWS0038]
gi|409760843|gb|EKN45960.1| oligoribonuclease [Pseudomonas viridiflava UASWS0038]
Length = 177
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M+EW H SGLT RVR S+V++ +A+ + F+ ++V +++P+ G
Sbjct: 46 AIHQSDETLARMDEWNTRQHGGSGLTQRVRESTVTMADAEAQTLAFIMQWVPERSSPICG 105
>gi|38344589|emb|CAD40497.2| OSJNBa0079M09.9 [Oryza sativa Japonica Group]
gi|116308941|emb|CAH66068.1| OSIGBa0092O07.3 [Oryza sativa Indica Group]
gi|116309117|emb|CAH66222.1| OSIGBa0157N01.8 [Oryza sativa Indica Group]
Length = 249
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%)
Query: 36 NEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++E + +MNEWC HH+ASGL ++V S +S +A+K++ F+ KY+ T + G
Sbjct: 114 SKECVNDMNEWCKVHHSASGLKEKVLQSDISENDAEKQVLDFIRKYIGSATPLIAG 169
>gi|326527927|dbj|BAJ89015.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 259
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 9/65 (13%)
Query: 36 NEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLH---------QFVAKYVKPKT 86
++E L NMNEWC HH ASGLT++V+ S +S +A+K+ H FV +Y+ T
Sbjct: 114 SKECLDNMNEWCKTHHGASGLTEQVQQSDISECDAEKQTHCYLQTCQVLDFVRRYIGSAT 173
Query: 87 APMVG 91
+ G
Sbjct: 174 PLIAG 178
>gi|300788911|ref|YP_003769202.1| oligoribonuclease [Amycolatopsis mediterranei U32]
gi|384152381|ref|YP_005535197.1| oligoribonuclease [Amycolatopsis mediterranei S699]
gi|399540792|ref|YP_006553454.1| oligoribonuclease [Amycolatopsis mediterranei S699]
gi|299798425|gb|ADJ48800.1| oligoribonuclease [Amycolatopsis mediterranei U32]
gi|340530535|gb|AEK45740.1| oligoribonuclease [Amycolatopsis mediterranei S699]
gi|398321562|gb|AFO80509.1| oligoribonuclease [Amycolatopsis mediterranei S699]
Length = 191
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++ +EE L M E E H SGLT+ VR S+V++EEA++R+ ++ ++V +P TAP+ G
Sbjct: 34 IHADEEKLAGMPEIVREMHAHSGLTEEVRRSTVTLEEAERRVLDYIREHVPEPGTAPLAG 93
>gi|419802237|ref|ZP_14327433.1| oligoribonuclease [Haemophilus parainfluenzae HK262]
gi|419844943|ref|ZP_14368230.1| oligoribonuclease [Haemophilus parainfluenzae HK2019]
gi|385190999|gb|EIF38426.1| oligoribonuclease [Haemophilus parainfluenzae HK262]
gi|386416869|gb|EIJ31361.1| oligoribonuclease [Haemophilus parainfluenzae HK2019]
Length = 182
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 39/61 (63%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L M+EWCV+ H A+GL DRV+AS ++ A+ + F+ ++V +P+
Sbjct: 46 IAVHQSDELLNKMSEWCVKTHTANGLVDRVKASKLTERAAELQTLDFLKRWVPKGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|335044621|ref|ZP_08537646.1| oligoribonuclease [Methylophaga aminisulfidivorans MP]
gi|333787867|gb|EGL53751.1| oligoribonuclease [Methylophaga aminisulfidivorans MP]
Length = 185
Score = 51.2 bits (121), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ +L M+EW H SGL +RVR SS++ EA+++ +F+ KYV +PM G
Sbjct: 47 AIHQDDAILNGMDEWNTRQHGKSGLVERVRNSSLNEAEAEQQTIEFLKKYVPAGVSPMCG 106
>gi|37200012|dbj|BAC95841.1| oligoribonuclease [Vibrio vulnificus YJ016]
Length = 227
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +EE L M+EWC H SGL +RVR S ++ +EA ++ F+ K+V +P+
Sbjct: 92 LAIHQSEEELAKMDEWCTNTHTGSGLVERVRGSQITEQEAVEQTIAFLEKWVPKGVSPIC 151
Query: 91 G 91
G
Sbjct: 152 G 152
>gi|421529125|ref|ZP_15975673.1| oligoribonuclease [Pseudomonas putida S11]
gi|402213433|gb|EJT84782.1| oligoribonuclease [Pseudomonas putida S11]
Length = 180
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++EVL M+EW H ASGLT RVR S V + EA+ + F+ ++V +P+
Sbjct: 45 IAIHHSDEVLARMDEWNTRTHGASGLTQRVRESKVGMAEAEAQTIAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|339489628|ref|YP_004704156.1| oligoribonuclease [Pseudomonas putida S16]
gi|338840471|gb|AEJ15276.1| oligoribonuclease [Pseudomonas putida S16]
Length = 180
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++EVL M+EW H ASGLT RVR S V + EA+ + F+ ++V +P+
Sbjct: 45 IAIHHSDEVLARMDEWNTRTHGASGLTQRVRESKVDMAEAEAQTIAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|398973182|ref|ZP_10684215.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM25]
gi|398143505|gb|EJM32380.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM25]
Length = 180
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++EVL M+EW H SGLT RVR S VS+ EA+ F+ K+V +P+
Sbjct: 45 IAIHHSDEVLARMDEWNTRTHGNSGLTQRVRDSRVSMAEAEAETIAFLEKWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|237798271|ref|ZP_04586732.1| oligoribonuclease [Pseudomonas syringae pv. oryzae str. 1_6]
gi|331021123|gb|EGI01180.1| oligoribonuclease [Pseudomonas syringae pv. oryzae str. 1_6]
Length = 178
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT RVR S++S+ +A+ + +F+ +V +++P+
Sbjct: 45 IAVHQSDETLAKMDEWNTRQHGGSGLTQRVRESTISMADAEAQTLEFIKLWVPERSSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|113968935|ref|YP_732728.1| oligoribonuclease [Shewanella sp. MR-4]
gi|114048927|ref|YP_739477.1| oligoribonuclease [Shewanella sp. MR-7]
gi|123130769|sp|Q0HMP6.1|ORN_SHESM RecName: Full=Oligoribonuclease
gi|123131054|sp|Q0HR35.1|ORN_SHESR RecName: Full=Oligoribonuclease
gi|113883619|gb|ABI37671.1| Exonuclease, RNase T and DNA polymerase III [Shewanella sp. MR-4]
gi|113890369|gb|ABI44420.1| Exonuclease, RNase T and DNA polymerase III [Shewanella sp. MR-7]
Length = 181
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++EVL M++W +HH SGL DRVRAS V+ +A + F+ +YV +PM
Sbjct: 46 IAIHQSDEVLAAMDDWNQKHHGESGLIDRVRASQVNEAQAVAQTIAFLEQYVPKGASPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|229047208|ref|NP_935870.2| oligoribonuclease [Vibrio vulnificus YJ016]
gi|229220645|ref|NP_760214.2| oligoribonuclease [Vibrio vulnificus CMCP6]
gi|320155081|ref|YP_004187460.1| 3'-to-5' oligoribonuclease [Vibrio vulnificus MO6-24/O]
gi|29611786|sp|Q8DCV6.2|ORN_VIBVU RecName: Full=Oligoribonuclease
gi|41017432|sp|Q7MGZ7.2|ORN_VIBVY RecName: Full=Oligoribonuclease
gi|319930393|gb|ADV85257.1| 3'-to-5' oligoribonuclease (orn) [Vibrio vulnificus MO6-24/O]
gi|319999184|gb|AAO09741.2| Oligoribonuclease [Vibrio vulnificus CMCP6]
Length = 181
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +EE L M+EWC H SGL +RVR S ++ +EA ++ F+ K+V +P+
Sbjct: 46 LAIHQSEEELAKMDEWCTNTHTGSGLVERVRGSQITEQEAVEQTIAFLEKWVPKGVSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|410447007|ref|ZP_11301109.1| oligoribonuclease [SAR86 cluster bacterium SAR86E]
gi|409979994|gb|EKO36746.1| oligoribonuclease [SAR86 cluster bacterium SAR86E]
Length = 181
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 36/55 (65%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+E+++NM+EW + H SGLT V SS+S + A+ +F++KYV K +PM G
Sbjct: 54 KELIENMDEWNTKQHGNSGLTKSVLQSSISEQAAEIETLEFISKYVGNKASPMCG 108
>gi|357493709|ref|XP_003617143.1| Oligoribonuclease [Medicago truncatula]
gi|355518478|gb|AET00102.1| Oligoribonuclease [Medicago truncatula]
Length = 1551
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 37/59 (62%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E L M EWC HH ASGLT +V S++S EA++++ +FV K+V P++
Sbjct: 758 IHQTKECLDGMGEWCKSHHAASGLTKKVLQSTISEREAEEQVIEFVKKHVGGTYKPLLA 816
>gi|212721064|ref|NP_001131502.1| uncharacterized protein LOC100192839 [Zea mays]
gi|194691708|gb|ACF79938.1| unknown [Zea mays]
gi|413936871|gb|AFW71422.1| oligoribonuclease isoform 1 [Zea mays]
gi|413936872|gb|AFW71423.1| oligoribonuclease isoform 2 [Zea mays]
Length = 249
Score = 51.2 bits (121), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 36 NEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+++ L NM+EWC HH ASGLT+RV S +S +A+ ++ FV K++ T + G
Sbjct: 113 SKDCLDNMDEWCKTHHAASGLTERVLQSELSEHDAEAKVLDFVRKHINSGTPLLAG 168
>gi|398870913|ref|ZP_10626233.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM74]
gi|398207542|gb|EJM94291.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM74]
Length = 180
Score = 51.2 bits (121), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++E+L M+EW H SGLT RVR S +S+ EA+ F+ ++V +P+
Sbjct: 45 IAIHHSDEILAGMDEWNTRQHGGSGLTQRVRDSRISMAEAEAETIAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|241763728|ref|ZP_04761776.1| Exonuclease RNase T and DNA polymerase III [Acidovorax delafieldii
2AN]
gi|241367033|gb|EER61418.1| Exonuclease RNase T and DNA polymerase III [Acidovorax delafieldii
2AN]
Length = 195
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E+L M+ W H SGL D+V+AS+++ +A++++ F+A+YV TAPM G
Sbjct: 61 AIHQADELLDRMDAWNKGTHGRSGLIDKVKASTITEAQAEQQILDFLAQYVPKGTAPMCG 120
>gi|325271243|ref|ZP_08137788.1| oligoribonuclease [Pseudomonas sp. TJI-51]
gi|324103646|gb|EGC00948.1| oligoribonuclease [Pseudomonas sp. TJI-51]
Length = 180
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++EVL M+EW H ASGLT RVR S V + EA+ + F+ ++V +P+
Sbjct: 45 IAIHHSDEVLARMDEWNTRTHGASGLTQRVRDSKVGMAEAEAQTIAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|157963361|ref|YP_001503395.1| oligoribonuclease [Shewanella pealeana ATCC 700345]
gi|157848361|gb|ABV88860.1| Exonuclease RNase T and DNA polymerase III [Shewanella pealeana
ATCC 700345]
Length = 181
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W +HH SGL DRVRAS+++ E+A F+++YV +PM G
Sbjct: 47 AIHQSDEQLALMDDWNQKHHGQSGLVDRVRASTINEEQAIAETIAFLSQYVPAGASPMCG 106
>gi|425897203|ref|ZP_18873794.1| oligoribonuclease [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
gi|397884019|gb|EJL00505.1| oligoribonuclease [Pseudomonas chlororaphis subsp. aureofaciens
30-84]
Length = 180
Score = 50.8 bits (120), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++EVL M+EW H SGLT RVR S +S+ EA+ + F+ ++V +P+
Sbjct: 45 IAIHQSDEVLAGMDEWNTRQHGGSGLTQRVRESRISMAEAEAQTIAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|416019064|ref|ZP_11565957.1| oligoribonuclease [Pseudomonas syringae pv. glycinea str. B076]
gi|416024089|ref|ZP_11568268.1| oligoribonuclease [Pseudomonas syringae pv. glycinea str. race 4]
gi|422402807|ref|ZP_16479867.1| oligoribonuclease [Pseudomonas syringae pv. glycinea str. race 4]
gi|320321892|gb|EFW77988.1| oligoribonuclease [Pseudomonas syringae pv. glycinea str. B076]
gi|320331003|gb|EFW86977.1| oligoribonuclease [Pseudomonas syringae pv. glycinea str. race 4]
gi|330872242|gb|EGH06391.1| oligoribonuclease [Pseudomonas syringae pv. glycinea str. race 4]
Length = 178
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT RVR S++++ EA+ + +F+ +V +++P+
Sbjct: 45 IAVHQSDETLAKMDEWNTRQHGGSGLTQRVRESTINMAEAEAQTLEFIKLWVPERSSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|254516802|ref|ZP_05128860.1| oligoribonuclease [gamma proteobacterium NOR5-3]
gi|219674307|gb|EED30675.1| oligoribonuclease [gamma proteobacterium NOR5-3]
Length = 184
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ L M+EW HH +SGL DRVRAS++ +EA + +F+ +V +PM G
Sbjct: 46 AIHQSDATLAAMDEWNTTHHGSSGLCDRVRASTIDEQEAARLTIEFLKDWVPAGASPMCG 105
>gi|127511493|ref|YP_001092690.1| oligoribonuclease [Shewanella loihica PV-4]
gi|166216587|sp|A3QAD3.1|ORN_SHELP RecName: Full=Oligoribonuclease
gi|126636788|gb|ABO22431.1| Exonuclease, RNase T and DNA polymerase III [Shewanella loihica
PV-4]
Length = 181
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 39/61 (63%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +E+VL M++W +HH SGL DRVRAS S ++A ++ F++++V +PM
Sbjct: 46 IAIHQSEDVLAAMDDWNQKHHGESGLIDRVRASDFSEQDAIEQTIAFLSEHVPAGVSPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|398841150|ref|ZP_10598375.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM102]
gi|398108971|gb|EJL98916.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM102]
Length = 180
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++E+L M+EW H SGLT RVR S + + EA+ F+ K+V +P+
Sbjct: 45 IAIHHSDEILAGMDEWNTRQHGGSGLTQRVRDSRIGMAEAEAETIAFLEKWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|302062272|ref|ZP_07253813.1| oligoribonuclease [Pseudomonas syringae pv. tomato K40]
Length = 107
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT RVR S++S+ +A+ + F+ +V +++P+
Sbjct: 45 IAVHQSDETLAKMDEWNTRQHGGSGLTQRVRESTISMADAEAQTLAFIKLWVPERSSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|91794560|ref|YP_564211.1| oligoribonuclease [Shewanella denitrificans OS217]
gi|123165774|sp|Q12J88.1|ORN_SHEDO RecName: Full=Oligoribonuclease
gi|91716562|gb|ABE56488.1| Exonuclease [Shewanella denitrificans OS217]
Length = 181
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W +HH SGL DRV+AS + +A ++ +F+A+YV +PM
Sbjct: 46 IAIHQSDETLAKMDDWNQKHHGQSGLIDRVKASQFTEADAIEQTIKFLAQYVPKGASPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|115446061|ref|NP_001046810.1| Os02g0465500 [Oryza sativa Japonica Group]
gi|47496882|dbj|BAD19846.1| putative oligoribonuclease [Oryza sativa Japonica Group]
gi|47497504|dbj|BAD19557.1| putative oligoribonuclease [Oryza sativa Japonica Group]
gi|113536341|dbj|BAF08724.1| Os02g0465500 [Oryza sativa Japonica Group]
gi|215687346|dbj|BAG91911.1| unnamed protein product [Oryza sativa Japonica Group]
Length = 247
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVGEYHTS 96
+++L NM+EWC HH ASGLT RV S++S +A+ ++ FV K+V + P++
Sbjct: 112 KDLLDNMDEWCKTHHAASGLTQRVLQSTISEHDAETQVLDFVKKHVG-SSPPLIAGNSVY 170
Query: 97 KELL 100
+LL
Sbjct: 171 VDLL 174
>gi|218190704|gb|EEC73131.1| hypothetical protein OsI_07145 [Oryza sativa Indica Group]
Length = 247
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 40/64 (62%), Gaps = 1/64 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVGEYHTS 96
+++L NM+EWC HH ASGLT RV S++S +A+ ++ FV K+V + P++
Sbjct: 112 KDLLDNMDEWCKTHHAASGLTQRVLQSTISEHDAETQVLDFVKKHVG-SSPPLIAGNSVY 170
Query: 97 KELL 100
+LL
Sbjct: 171 VDLL 174
>gi|398985173|ref|ZP_10690950.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM24]
gi|399014695|ref|ZP_10716981.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM16]
gi|398110289|gb|EJM00196.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM16]
gi|398154490|gb|EJM42960.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM24]
Length = 180
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++EVL M+EW H SGLT RVR S +S+ EA+ F+ K+V +P+
Sbjct: 45 IAIHHSDEVLARMDEWNTRTHGNSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|262401567|ref|ZP_06078134.1| oligoribonuclease [Vibrio sp. RC586]
gi|262352282|gb|EEZ01411.1| oligoribonuclease [Vibrio sp. RC586]
Length = 181
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 35/61 (57%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ E L M+EWC H ASGL RVRAS VS E+A + F+ ++V + +P+
Sbjct: 46 IAIHQPESELAKMDEWCTTTHTASGLVARVRASQVSEEQAIDQTLAFLKQWVPERKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|221487325|gb|EEE25557.1| oligoribonuclease protein, putative [Toxoplasma gondii GT1]
Length = 367
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 21 AYLQTQGTCK-------CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKR 73
A + T G CK ++ ++E+L M+EWC + H SGLT R S++++ +A+++
Sbjct: 213 AVIVTDGQCKKRIVGPNLIVHASDELLDGMDEWCKKTHGESGLTAACRKSTLTLADAEEQ 272
Query: 74 LHQFVAKYVK-PKTAPMVG-EYHTSKELL 100
+ +FV K+V + AP+ G H ++ L
Sbjct: 273 ILEFVQKHVATTRVAPLGGNSVHVDRQFL 301
>gi|349576067|ref|ZP_08887960.1| oligoribonuclease [Neisseria shayeganii 871]
gi|348012341|gb|EGY51295.1| oligoribonuclease [Neisseria shayeganii 871]
Length = 188
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++EVL NM+ W H +GLT RV+ SS S +E ++RL F++ ++ + PM G
Sbjct: 46 AIHQSDEVLDNMDAWNTATHARTGLTQRVKDSSFSEQEVERRLLAFLSAWIPQNSTPMCG 105
>gi|85711864|ref|ZP_01042919.1| oligoribonuclease [Idiomarina baltica OS145]
gi|85694261|gb|EAQ32204.1| oligoribonuclease [Idiomarina baltica OS145]
Length = 183
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 34/52 (65%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M++W V+ H SGL DRV+ S S ++A + +F++ YV+P T+PM G
Sbjct: 57 LDKMDDWNVKTHTGSGLVDRVKKSQYSEQDAVRETIEFLSHYVEPNTSPMCG 108
>gi|237829909|ref|XP_002364252.1| oligoribonuclease, putative [Toxoplasma gondii ME49]
gi|211961916|gb|EEA97111.1| oligoribonuclease, putative [Toxoplasma gondii ME49]
gi|221507120|gb|EEE32724.1| oligoribonuclease, putative [Toxoplasma gondii VEG]
Length = 367
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 51/89 (57%), Gaps = 9/89 (10%)
Query: 21 AYLQTQGTCK-------CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKR 73
A + T G CK ++ ++E+L M+EWC + H SGLT R S++++ +A+++
Sbjct: 213 AVIVTDGQCKKRIVGPNLIVHASDELLDGMDEWCKKTHGESGLTAACRKSTLTLADAEEQ 272
Query: 74 LHQFVAKYVK-PKTAPMVG-EYHTSKELL 100
+ +FV K+V + AP+ G H ++ L
Sbjct: 273 ILEFVQKHVATTRVAPLGGNSVHVDRQFL 301
>gi|195651097|gb|ACG45016.1| oligoribonuclease [Zea mays]
Length = 249
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%)
Query: 36 NEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+++ L NM+EWC HH ASGLT+RV S +S +A+ ++ FV K++ T + G
Sbjct: 113 SKDCLDNMDEWCKTHHAASGLTERVLQSELSEHDAEAKVLDFVRKHINSVTPLLAG 168
>gi|325266418|ref|ZP_08133095.1| oligoribonuclease [Kingella denitrificans ATCC 33394]
gi|324981861|gb|EGC17496.1| oligoribonuclease [Kingella denitrificans ATCC 33394]
Length = 182
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+ WC H +GLT+RVRAS+ + E ++ L ++ +++ KT PM G
Sbjct: 46 AIHQSDEILNGMDAWCTATHARTGLTERVRASTHTEAEVEEALLAWMQEWIPAKTTPMCG 105
>gi|255068356|ref|ZP_05320211.1| oligoribonuclease [Neisseria sicca ATCC 29256]
gi|255047405|gb|EET42869.1| oligoribonuclease [Neisseria sicca ATCC 29256]
Length = 185
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+EW H +GLT RVR S ++ E +++L F+A+++ K PM G
Sbjct: 48 VHQSDELLDGMDEWNTATHGRTGLTQRVRESQLTEAEVEQKLLDFIAQWIPEKATPMCG 106
>gi|398850039|ref|ZP_10606749.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM80]
gi|398249763|gb|EJN35141.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM80]
Length = 180
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++EVL M+EW H SGLT RVR S +S+ EA+ F+ K+V +P+
Sbjct: 45 IAIHHSDEVLARMDEWNTRTHGNSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|398968819|ref|ZP_10682559.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM30]
gi|424921110|ref|ZP_18344471.1| Oligoribonuclease (3''->5'' exoribonuclease) [Pseudomonas
fluorescens R124]
gi|398143355|gb|EJM32232.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM30]
gi|404302270|gb|EJZ56232.1| Oligoribonuclease (3''->5'' exoribonuclease) [Pseudomonas
fluorescens R124]
Length = 180
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++EVL M+EW H SGLT RVR S +S+ EA+ F+ K+V +P+
Sbjct: 45 IAIHHSDEVLARMDEWNTRTHGNSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|347540137|ref|YP_004847562.1| oligoribonuclease [Pseudogulbenkiania sp. NH8B]
gi|345643315|dbj|BAK77148.1| oligoribonuclease [Pseudogulbenkiania sp. NH8B]
Length = 181
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + VL M+EW H SGL +RV+AS++S +A++++ F+ +YV KT+PM G
Sbjct: 47 AIHQPDSVLDGMDEWNKSTHARSGLIERVKASTLSEADAEEQMLAFLQEYVPAKTSPMCG 106
>gi|269213888|ref|ZP_05983052.2| oligoribonuclease [Neisseria cinerea ATCC 14685]
gi|269145276|gb|EEZ71694.1| oligoribonuclease [Neisseria cinerea ATCC 14685]
Length = 188
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L NM+EW H +GLT RVR SS + E +++L F+++++ + PM G
Sbjct: 47 AVHQSDELLDNMDEWNTATHGRTGLTQRVRESSYTEAEVEQKLLDFMSEWIPERATPMCG 106
>gi|400287856|ref|ZP_10789888.1| oligoribonuclease [Psychrobacter sp. PAMC 21119]
Length = 225
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ ++ +L M++W + H SGL DRVR S+V++ EA+ +F+ K+V +PM G
Sbjct: 89 AIKVSDRILNGMDDWNTKQHGQSGLVDRVRRSTVTLAEAEAETIKFLNKWVDSGKSPMCG 148
>gi|299771588|ref|YP_003733614.1| oligoribonuclease [Acinetobacter oleivorans DR1]
gi|298701676|gb|ADI92241.1| oligoribonuclease [Acinetobacter oleivorans DR1]
Length = 188
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ +L M+EW H SGL +RVR S ++ +A+ + +F+ K+V PK +PM G
Sbjct: 53 DRILNAMDEWNTRQHGQSGLIERVRRSKLTALDAELQTLEFLKKWVNPKVSPMCG 107
>gi|146284105|ref|YP_001174258.1| oligoribonuclease [Pseudomonas stutzeri A1501]
gi|339495826|ref|YP_004716119.1| oligoribonuclease [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
gi|386022449|ref|YP_005940474.1| oligoribonuclease [Pseudomonas stutzeri DSM 4166]
gi|166216582|sp|A4VR15.1|ORN_PSEU5 RecName: Full=Oligoribonuclease
gi|145572310|gb|ABP81416.1| oligoribonuclease [Pseudomonas stutzeri A1501]
gi|327482422|gb|AEA85732.1| oligoribonuclease [Pseudomonas stutzeri DSM 4166]
gi|338803198|gb|AEJ07030.1| oligoribonuclease [Pseudomonas stutzeri ATCC 17588 = LMG 11199]
Length = 180
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++EVL M+EW H SGLT RVR S +S EA++ +F+ ++V +P+
Sbjct: 45 IAVHQSDEVLARMDEWNTRQHGGSGLTQRVRESRISTAEAERLTLEFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|384567066|ref|ZP_10014170.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
glauca K62]
gi|384522920|gb|EIF00116.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
glauca K62]
Length = 202
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++E L NM + + H SGLT+ VR S++++EEA++R ++ +YV P+TAP+ G
Sbjct: 45 IHADDEALANMPDVVRDMHARSGLTEEVRRSTMTLEEAERRALAYIREYVPDPQTAPLAG 104
>gi|224824186|ref|ZP_03697294.1| Exonuclease RNase T and DNA polymerase III [Pseudogulbenkiania
ferrooxidans 2002]
gi|224603605|gb|EEG09780.1| Exonuclease RNase T and DNA polymerase III [Pseudogulbenkiania
ferrooxidans 2002]
Length = 181
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + VL M+EW H SGL +RV+AS++S +A++++ F+ +YV KT+PM G
Sbjct: 47 AIHQPDSVLDGMDEWNKSTHARSGLIERVKASTLSETDAEEQMLAFLQEYVPAKTSPMCG 106
>gi|418289004|ref|ZP_12901403.1| oligoribonuclease [Neisseria meningitidis NM233]
gi|372200516|gb|EHP14582.1| oligoribonuclease [Neisseria meningitidis NM233]
Length = 203
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L NM+EW H +GLT RVR SS + E +++L F++++V + PM G
Sbjct: 62 AIHQSDELLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPERATPMCG 121
>gi|261254064|ref|ZP_05946637.1| oligoribonuclease [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|417954991|ref|ZP_12598018.1| oligoribonuclease [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|260937455|gb|EEX93444.1| oligoribonuclease [Vibrio orientalis CIP 102891 = ATCC 33934]
gi|342814205|gb|EGU49154.1| oligoribonuclease [Vibrio orientalis CIP 102891 = ATCC 33934]
Length = 181
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L+ M+EWC H SGL DRVR S++ +EA ++ +F+ K+V +P+ G
Sbjct: 55 LKKMDEWCTTTHTGSGLVDRVRKSNIDEQEAVRQTIEFLEKWVPKGKSPICG 106
>gi|222622820|gb|EEE56952.1| hypothetical protein OsJ_06659 [Oryza sativa Japonica Group]
Length = 348
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 37/55 (67%), Gaps = 1/55 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+++L NM+EWC HH ASGLT RV S++S +A+ ++ FV K+V + P++
Sbjct: 213 KDLLDNMDEWCKTHHAASGLTQRVLQSTISEHDAETQVLDFVKKHVG-SSPPLIA 266
>gi|156551223|ref|XP_001602293.1| PREDICTED: oligoribonuclease, mitochondrial-like [Nasonia
vitripennis]
Length = 188
Score = 50.8 bits (120), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L+ +++ L MNEWC EHH SGL + + S DK L+ F+ KY+ PM G
Sbjct: 50 LHQSDDELARMNEWCQEHHTKSGLVEASKKSQEDERSVDKSLYNFLNKYIPKGRCPMAG 108
>gi|70734062|ref|YP_257702.1| oligoribonuclease [Pseudomonas protegens Pf-5]
gi|85542915|sp|Q4KJ81.1|ORN_PSEF5 RecName: Full=Oligoribonuclease
gi|68348361|gb|AAY95967.1| oligoribonuclease [Pseudomonas protegens Pf-5]
Length = 180
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L M+EW H SGLT RVR S +S+ EA+ + F+ ++V +P+
Sbjct: 45 IAIHQSDEILAGMDEWNTRQHGGSGLTQRVRESRISMAEAEAQTIAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|367000760|ref|XP_003685115.1| hypothetical protein TPHA_0D00370 [Tetrapisispora phaffii CBS 4417]
gi|357523413|emb|CCE62681.1| hypothetical protein TPHA_0D00370 [Tetrapisispora phaffii CBS 4417]
Length = 277
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 18/50 (36%), Positives = 33/50 (66%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV 82
++Y ++V+ MNEWC++ H +SGLTD+V S ++ + + F+ KY+
Sbjct: 102 VHYGKDVMSKMNEWCIQQHGSSGLTDQVLKSEKTLASVQQEIQDFLVKYI 151
>gi|389686479|ref|ZP_10177800.1| oligoribonuclease [Pseudomonas chlororaphis O6]
gi|399004976|ref|ZP_10707577.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM17]
gi|388549940|gb|EIM13212.1| oligoribonuclease [Pseudomonas chlororaphis O6]
gi|398127895|gb|EJM17296.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM17]
Length = 180
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L M+EW H SGLT RVR S +S+ EA+ + F+ ++V +P+
Sbjct: 45 IAIHQSDEILAGMDEWNTRQHGGSGLTQRVRESRISMAEAEAQTIAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|74317857|ref|YP_315597.1| oligoribonuclease [Thiobacillus denitrificans ATCC 25259]
gi|123611601|sp|Q3SHU1.1|ORN_THIDA RecName: Full=Oligoribonuclease
gi|74057352|gb|AAZ97792.1| Exonuclease [Thiobacillus denitrificans ATCC 25259]
Length = 182
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ V+ M+ W H SGL DRV+AS +S +A+ ++ +FV ++V P+T+PM G
Sbjct: 52 DAVMDAMDSWNRGTHGKSGLIDRVKASQLSESDAEAQMLEFVKQHVSPRTSPMCG 106
>gi|168010065|ref|XP_001757725.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162691001|gb|EDQ77365.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 182
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/47 (53%), Positives = 34/47 (72%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK 83
EE+L+ M+ EHH ASGL D VRASSV+ EEA++ + +FV KY +
Sbjct: 47 EEILEGMDVSFREHHAASGLMDGVRASSVTEEEAEQEVLKFVRKYTR 93
>gi|170717217|ref|YP_001784337.1| oligoribonuclease [Haemophilus somnus 2336]
gi|168825346|gb|ACA30717.1| Exonuclease RNase T and DNA polymerase III [Haemophilus somnus
2336]
Length = 184
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ + E+L NMNEWCV+ H ++GL +RV+ S ++ A+ + F+ K+V +P+
Sbjct: 46 LAIHQSNELLNNMNEWCVKTHTSNGLIERVKNSKLTERAAELQTLDFLKKWVPKGVSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|374623412|ref|ZP_09695922.1| Exonuclease RNase T and DNA polymerase III [Ectothiorhodospira sp.
PHS-1]
gi|373942523|gb|EHQ53068.1| Exonuclease RNase T and DNA polymerase III [Ectothiorhodospira sp.
PHS-1]
Length = 181
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ EE+L M++W H SGL DRV+ S + EA++ +F+ +YV P+++PM G
Sbjct: 47 AIHQTEEILSRMDDWNRNTHGRSGLLDRVKLSLYNEVEAEQETLRFLKQYVPPRSSPMCG 106
>gi|113461243|ref|YP_719312.1| oligoribonuclease [Haemophilus somnus 129PT]
gi|112823286|gb|ABI25375.1| oligoribonuclease [Haemophilus somnus 129PT]
Length = 184
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ + E+L NMNEWCV+ H ++GL +RV+ S ++ A+ + F+ K+V +P+
Sbjct: 46 LAIHQSNELLNNMNEWCVKTHTSNGLIERVKNSKLTERAAELQTLDFLKKWVPKGVSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|418291259|ref|ZP_12903290.1| oligoribonuclease [Neisseria meningitidis NM220]
gi|372200163|gb|EHP14286.1| oligoribonuclease [Neisseria meningitidis NM220]
gi|389606562|emb|CCA45475.1| oligoribonuclease [Neisseria meningitidis alpha522]
Length = 187
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L NM+EW H +GLT RVR SS + E +++L F++++V + PM G
Sbjct: 46 AIHQSDELLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPERATPMCG 105
>gi|300310766|ref|YP_003774858.1| oligoribonuclease [Herbaspirillum seropedicae SmR1]
gi|300073551|gb|ADJ62950.1| oligoribonuclease (3'->5' exoribonuclease) protein [Herbaspirillum
seropedicae SmR1]
Length = 189
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+ W H SGL DRV+AS+V+ +A+K++ +F+ +YV +PM G
Sbjct: 55 AIHQSDELLDGMDAWNKGTHGRSGLIDRVKASTVTEADAEKQIIEFLKQYVPAGKSPMCG 114
>gi|414072604|ref|ZP_11408538.1| oligoribonuclease [Pseudoalteromonas sp. Bsw20308]
gi|410804967|gb|EKS10999.1| oligoribonuclease [Pseudoalteromonas sp. Bsw20308]
Length = 181
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ N+E+L M+EWC H SGLT R +AS+ E A + F+ ++V +PM G
Sbjct: 47 AIHQNDELLNGMDEWCTTQHGKSGLTARCKASTFDEEHAVAQTLDFLKQWVPAGVSPMCG 106
>gi|114332250|ref|YP_748472.1| oligoribonuclease [Nitrosomonas eutropha C91]
gi|122313081|sp|Q0ADS5.1|ORN_NITEC RecName: Full=Oligoribonuclease
gi|114309264|gb|ABI60507.1| Exonuclease, RNase T and DNA polymerase III [Nitrosomonas eutropha
C91]
Length = 181
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/55 (41%), Positives = 34/55 (61%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ VL M++W H SGL D+V+AS++S EA+ R+ F+A YV +PM G
Sbjct: 52 DSVLNGMDKWNQSTHGKSGLIDKVKASTLSEAEAEARMLAFLAPYVPADISPMCG 106
>gi|404402119|ref|ZP_10993703.1| oligoribonuclease [Pseudomonas fuscovaginae UPB0736]
Length = 180
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L M+EW H SGLT RVR S +S+ EA+ + F+ ++V +P+
Sbjct: 45 IAIHQSDEILAGMDEWNTRQHGGSGLTQRVRDSRISMAEAEAQTIAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|320583877|gb|EFW98090.1| 3'-5' RNA exonuclease [Ogataea parapolymorpha DL-1]
Length = 374
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 42/69 (60%), Gaps = 1/69 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG- 91
++Y++E + M+EWC HH SGLT +V SS ++E+ + +L ++++KY+ + G
Sbjct: 76 IHYSQERMNQMDEWCRTHHGDSGLTKKVVESSNTLEDVENQLLEYLSKYMSKGVGILAGN 135
Query: 92 EYHTSKELL 100
H ++ L
Sbjct: 136 SVHVDRQFL 144
>gi|357404384|ref|YP_004916308.1| oligoribonuclease [Methylomicrobium alcaliphilum 20Z]
gi|351717049|emb|CCE22714.1| oligoribonuclease [Methylomicrobium alcaliphilum 20Z]
Length = 181
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/94 (29%), Positives = 47/94 (50%), Gaps = 3/94 (3%)
Query: 1 MDNIGNRPSNTALSSMEQVKAYLQTQGTCK---CGLYYNEEVLQNMNEWCVEHHNASGLT 57
++ G P N A+ + + + K +Y +E+VL M+EW HH SGL
Sbjct: 13 LEMTGLDPDNDAIIEIATIVTDKDLEILAKGPVLAIYQDEQVLAKMDEWNQTHHGQSGLL 72
Query: 58 DRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+RV+ S+V EA+ + +F+ +V +PM G
Sbjct: 73 ERVQTSTVDEAEAEYQTLEFLKLWVPEGVSPMCG 106
>gi|297825941|ref|XP_002880853.1| exonuclease family protein [Arabidopsis lyrata subsp. lyrata]
gi|297326692|gb|EFH57112.1| exonuclease family protein [Arabidopsis lyrata subsp. lyrata]
Length = 223
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ L M EWC HH SGLT +VR S++S EA++++ +FV K+V + + G
Sbjct: 87 VHQTKDCLDKMGEWCQTHHGDSGLTKKVRLSTISEREAEQKVIEFVRKHVGSENPLLAG 145
>gi|52425567|ref|YP_088704.1| oligoribonuclease [Mannheimia succiniciproducens MBEL55E]
gi|59798011|sp|Q65SE1.1|ORN_MANSM RecName: Full=Oligoribonuclease
gi|52307619|gb|AAU38119.1| Orn protein [Mannheimia succiniciproducens MBEL55E]
Length = 186
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 40/61 (65%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L M++WC++ H+A+GL DRV+AS ++ A+ + F+ K+V +P+
Sbjct: 46 LAVHQSDELLAKMSDWCIKTHSANGLVDRVKASKLTERAAELQTIDFLKKWVPKGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|365985431|ref|XP_003669548.1| hypothetical protein NDAI_0C06460 [Naumovozyma dairenensis CBS 421]
gi|343768316|emb|CCD24305.1| hypothetical protein NDAI_0C06460 [Naumovozyma dairenensis CBS 421]
Length = 348
Score = 50.4 bits (119), Expect = 1e-04, Method: Composition-based stats.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++Y+ +V+ NMNEWC++ H SGLT +V S+ + E+ ++ L ++ K++ P M G
Sbjct: 154 IHYDSKVMDNMNEWCIDQHGKSGLTAKVLESTKTREQVEEELLAYIKKFIPDPNVGIMAG 213
>gi|388544904|ref|ZP_10148189.1| oligoribonuclease [Pseudomonas sp. M47T1]
gi|388276864|gb|EIK96441.1| oligoribonuclease [Pseudomonas sp. M47T1]
Length = 180
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++EVL M+EW H SGLT RVR S VS+ EA+ + F+ ++V +P+
Sbjct: 45 IAIHHSDEVLARMDEWNTRTHGNSGLTQRVRDSKVSMAEAEAQTIAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|258563774|ref|XP_002582632.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
gi|237908139|gb|EEP82540.1| conserved hypothetical protein [Uncinocarpus reesii 1704]
Length = 174
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/81 (34%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++ + +L +MN WC+ H SGLT V AS+ S EA + L +V YV +P+TA + G
Sbjct: 35 IHQPQHILSSMNPWCISTHGRSGLTAAVLASTTSPSEASEALLAYVQTYVPEPRTALLAG 94
Query: 92 -EYHTSKELLKDSDHFLVFSW 111
H + L + V W
Sbjct: 95 NSVHADRAFLAREPYKKVVDW 115
>gi|104783881|ref|YP_610379.1| oligoribonuclease [Pseudomonas entomophila L48]
gi|122401621|sp|Q1I440.1|ORN_PSEE4 RecName: Full=Oligoribonuclease
gi|95112868|emb|CAK17596.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas entomophila
L48]
Length = 180
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++EVL M+EW H SGLT RVR S VS+ EA+ + F+ ++V +P+
Sbjct: 45 IAIHHSDEVLARMDEWNTRTHGNSGLTQRVRESKVSMAEAEAQTIAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|385855878|ref|YP_005902391.1| oligoribonuclease [Neisseria meningitidis M01-240355]
gi|325204819|gb|ADZ00273.1| oligoribonuclease [Neisseria meningitidis M01-240355]
Length = 187
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L NM+EW H +GLT RVR SS + E +++L F++++V + PM G
Sbjct: 46 AIHQSDELLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPGRATPMCG 105
>gi|218767556|ref|YP_002342068.1| oligoribonuclease [Neisseria meningitidis Z2491]
gi|385337406|ref|YP_005891279.1| oligoribonuclease [Neisseria meningitidis WUE 2594]
gi|421538831|ref|ZP_15985003.1| oligoribonuclease [Neisseria meningitidis 93003]
gi|433476283|ref|ZP_20433618.1| exonuclease family protein [Neisseria meningitidis 88050]
gi|433480611|ref|ZP_20437892.1| exonuclease family protein [Neisseria meningitidis 63041]
gi|433514173|ref|ZP_20470956.1| exonuclease family protein [Neisseria meningitidis 63049]
gi|433516421|ref|ZP_20473183.1| exonuclease family protein [Neisseria meningitidis 2004090]
gi|433518372|ref|ZP_20475111.1| exonuclease family protein [Neisseria meningitidis 96023]
gi|433519676|ref|ZP_20476397.1| exonuclease family protein [Neisseria meningitidis 65014]
gi|433524818|ref|ZP_20481473.1| exonuclease family protein [Neisseria meningitidis 97020]
gi|433527630|ref|ZP_20484242.1| exonuclease family protein [Neisseria meningitidis NM3652]
gi|433531130|ref|ZP_20487710.1| exonuclease family protein [Neisseria meningitidis NM3642]
gi|433532017|ref|ZP_20488584.1| exonuclease family protein [Neisseria meningitidis 2007056]
gi|433535276|ref|ZP_20491808.1| exonuclease family protein [Neisseria meningitidis 2001212]
gi|433540809|ref|ZP_20497264.1| exonuclease family protein [Neisseria meningitidis 63006]
gi|11133783|sp|Q9JW09.1|ORN_NEIMA RecName: Full=Oligoribonuclease
gi|121051564|emb|CAM07862.1| putative oligoribonuclease [Neisseria meningitidis Z2491]
gi|319409820|emb|CBY90128.1| oligoribonuclease [Neisseria meningitidis WUE 2594]
gi|402315538|gb|EJU51101.1| oligoribonuclease [Neisseria meningitidis 93003]
gi|432208138|gb|ELK64117.1| exonuclease family protein [Neisseria meningitidis 88050]
gi|432213888|gb|ELK69798.1| exonuclease family protein [Neisseria meningitidis 63041]
gi|432245661|gb|ELL01126.1| exonuclease family protein [Neisseria meningitidis 63049]
gi|432251273|gb|ELL06644.1| exonuclease family protein [Neisseria meningitidis 2004090]
gi|432251682|gb|ELL07045.1| exonuclease family protein [Neisseria meningitidis 96023]
gi|432255667|gb|ELL10996.1| exonuclease family protein [Neisseria meningitidis 65014]
gi|432257869|gb|ELL13162.1| exonuclease family protein [Neisseria meningitidis 97020]
gi|432264571|gb|ELL19773.1| exonuclease family protein [Neisseria meningitidis NM3642]
gi|432266530|gb|ELL21713.1| exonuclease family protein [Neisseria meningitidis NM3652]
gi|432268662|gb|ELL23829.1| exonuclease family protein [Neisseria meningitidis 2007056]
gi|432269908|gb|ELL25056.1| exonuclease family protein [Neisseria meningitidis 2001212]
gi|432277824|gb|ELL32870.1| exonuclease family protein [Neisseria meningitidis 63006]
Length = 187
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L NM+EW H +GLT RVR SS + E +++L F++++V + PM G
Sbjct: 46 AIHQSDELLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPRRATPMCG 105
>gi|163749340|ref|ZP_02156589.1| oligoribonuclease [Shewanella benthica KT99]
gi|161331059|gb|EDQ01985.1| oligoribonuclease [Shewanella benthica KT99]
Length = 181
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +E L M+EW +HH SGL +RVR+S S ++A +FV++YV +PM
Sbjct: 46 IAIFQTDEQLATMDEWNQKHHGESGLVERVRSSQYSEDDAIAMTIEFVSQYVPQGISPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|261364839|ref|ZP_05977722.1| oligoribonuclease [Neisseria mucosa ATCC 25996]
gi|288566880|gb|EFC88440.1| oligoribonuclease [Neisseria mucosa ATCC 25996]
Length = 182
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+EW H +GLT RVR S ++ E +++L F+A+++ K PM G
Sbjct: 48 VHQSDELLDGMDEWNTATHGRTGLTRRVRESQLTEAEVEQKLLDFIAQWIPEKATPMCG 106
>gi|148652620|ref|YP_001279713.1| oligoribonuclease [Psychrobacter sp. PRwf-1]
gi|148571704|gb|ABQ93763.1| Exonuclease, RNase T and DNA polymerase III [Psychrobacter sp.
PRwf-1]
Length = 193
Score = 50.4 bits (119), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ +++ L M++W + H SGL DRVR SSV++E+A++ F+ K+V +PM G
Sbjct: 57 AIKVSDQKLNAMDDWNTKQHGQSGLIDRVRRSSVTLEQAEQETIAFLNKWVDEGKSPMCG 116
>gi|347819999|ref|ZP_08873433.1| oligoribonuclease [Verminephrobacter aporrectodeae subsp.
tuberculatae At4]
Length = 192
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + +L M+ W H SGL D+V+AS+V+ EEA++++ F+++YV APM G
Sbjct: 58 AIHQPDALLDRMDAWNQGTHGRSGLIDKVKASTVTEEEAERQIIAFLSRYVPKGAAPMCG 117
>gi|242780586|ref|XP_002479627.1| RNA exonuclease Rex2, putative [Talaromyces stipitatus ATCC 10500]
gi|218719774|gb|EED19193.1| RNA exonuclease Rex2, putative [Talaromyces stipitatus ATCC 10500]
Length = 189
Score = 50.1 bits (118), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 39/74 (52%), Gaps = 2/74 (2%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG-EYHTSK 97
L M++WC++ H SGLT V AS+ A +L ++ +YV +P+TA + G H +
Sbjct: 58 LDAMSQWCIDTHGRSGLTQAVLASTTDAATASSQLLAYIKRYVTEPRTALLAGNSIHADR 117
Query: 98 ELLKDSDHFLVFSW 111
L + LV W
Sbjct: 118 AFLAKPPYSLVLEW 131
>gi|224120530|ref|XP_002330965.1| predicted protein [Populus trichocarpa]
gi|222872757|gb|EEF09888.1| predicted protein [Populus trichocarpa]
Length = 219
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 38/59 (64%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M EWC HH ASGLT++V S ++ +A+K++ +FV ++V T + G
Sbjct: 81 IHQSKECLDRMGEWCQSHHAASGLTNKVLGSKITERDAEKQVIEFVKRHVGTHTPLIAG 139
>gi|242064994|ref|XP_002453786.1| hypothetical protein SORBIDRAFT_04g017420 [Sorghum bicolor]
gi|241933617|gb|EES06762.1| hypothetical protein SORBIDRAFT_04g017420 [Sorghum bicolor]
Length = 246
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 35/56 (62%)
Query: 36 NEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+++ L NM EWC HH ASGLT+RV S +S +A+ ++ FV K++ T + G
Sbjct: 110 SKDCLDNMGEWCKTHHAASGLTERVLQSELSEHDAEAKVLDFVRKHINSGTPLLAG 165
>gi|326318064|ref|YP_004235736.1| exonuclease RNase T and DNA polymerase III [Acidovorax avenae
subsp. avenae ATCC 19860]
gi|323374900|gb|ADX47169.1| Exonuclease RNase T and DNA polymerase III [Acidovorax avenae
subsp. avenae ATCC 19860]
Length = 193
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ +L M+ W H SGL ++VRAS+V+ EA++ + +F+A+YV+ APM G
Sbjct: 59 AIHQSDALLDGMDAWNKGTHGRSGLIEKVRASTVTEAEAEQAILEFLARYVRKGVAPMCG 118
>gi|120610573|ref|YP_970251.1| oligoribonuclease [Acidovorax citrulli AAC00-1]
gi|166215745|sp|A1TND9.1|ORN_ACIAC RecName: Full=Oligoribonuclease
gi|120589037|gb|ABM32477.1| Exonuclease, RNase T and DNA polymerase III [Acidovorax citrulli
AAC00-1]
Length = 193
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ +L M+ W H SGL ++VRAS+V+ EA++ + +F+A+YV+ APM G
Sbjct: 59 AIHQSDALLDGMDAWNKGTHGRSGLIEKVRASTVTEAEAEQAILEFLARYVRKGVAPMCG 118
>gi|257453441|ref|ZP_05618736.1| oligoribonuclease Orn [Enhydrobacter aerosaccus SK60]
gi|257449193|gb|EEV24141.1| oligoribonuclease Orn [Enhydrobacter aerosaccus SK60]
Length = 183
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%)
Query: 39 VLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
VL +M++W H SGL DR+R S+V++ +A+ F++KYV+ +PM G
Sbjct: 54 VLNSMDDWNTRQHGQSGLIDRIRRSNVTMAQAETETIAFLSKYVESGRSPMCG 106
>gi|251792379|ref|YP_003007105.1| oligoribonuclease [Aggregatibacter aphrophilus NJ8700]
gi|422335937|ref|ZP_16416910.1| oligoribonuclease [Aggregatibacter aphrophilus F0387]
gi|247533772|gb|ACS97018.1| oligoribonuclease [Aggregatibacter aphrophilus NJ8700]
gi|353346123|gb|EHB90408.1| oligoribonuclease [Aggregatibacter aphrophilus F0387]
Length = 181
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 36/55 (65%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+E+L M+EWCV+ H A+GL +RV+ S ++ A+ + F+ KYV T+P+ G
Sbjct: 52 DELLNKMSEWCVKTHTANGLVERVKMSKLNERAAELQTLGFLKKYVPKGTSPICG 106
>gi|78484978|ref|YP_390903.1| oligoribonuclease [Thiomicrospira crunogena XCL-2]
gi|123555812|sp|Q31HZ4.1|ORN_THICR RecName: Full=Oligoribonuclease
gi|78363264|gb|ABB41229.1| Exonuclease [Thiomicrospira crunogena XCL-2]
Length = 184
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M+ WC HH SGLT RV+ S++++ +A++ +F+ YV +PM G
Sbjct: 54 LDGMDAWCTTHHGNSGLTKRVQESTITMAQAEQETIKFLKPYVPKGKSPMCG 105
>gi|304388401|ref|ZP_07370510.1| oligoribonuclease [Neisseria meningitidis ATCC 13091]
gi|304337613|gb|EFM03773.1| oligoribonuclease [Neisseria meningitidis ATCC 13091]
Length = 187
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L NM+EW H +GLT RVR SS + E +++L F++++V + PM G
Sbjct: 46 AVHQSDELLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPERATPMCG 105
>gi|451936510|ref|YP_007460364.1| oligoribonuclease [Candidatus Kinetoplastibacterium oncopeltii
TCC290E]
gi|451777433|gb|AGF48408.1| oligoribonuclease [Candidatus Kinetoplastibacterium oncopeltii
TCC290E]
Length = 181
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ N EVL++M++W H SGL DRV +SSVS +EA+ + F+ ++ P +P+
Sbjct: 46 IAIHQNNEVLESMDKWNKSVHGKSGLVDRVLSSSVSEKEAENCILLFLKNHINPGKSPLC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|28872064|ref|NP_794683.1| oligoribonuclease [Pseudomonas syringae pv. tomato str. DC3000]
gi|213967916|ref|ZP_03396062.1| oligoribonuclease [Pseudomonas syringae pv. tomato T1]
gi|301384436|ref|ZP_07232854.1| oligoribonuclease [Pseudomonas syringae pv. tomato Max13]
gi|302132276|ref|ZP_07258266.1| oligoribonuclease [Pseudomonas syringae pv. tomato NCPPB 1108]
gi|422656124|ref|ZP_16718571.1| oligoribonuclease [Pseudomonas syringae pv. lachrymans str.
M302278]
gi|37999378|sp|Q87VI6.1|ORN_PSESM RecName: Full=Oligoribonuclease
gi|28855317|gb|AAO58378.1| oligoribonuclease [Pseudomonas syringae pv. tomato str. DC3000]
gi|213927259|gb|EEB60808.1| oligoribonuclease [Pseudomonas syringae pv. tomato T1]
gi|331014602|gb|EGH94658.1| oligoribonuclease [Pseudomonas syringae pv. lachrymans str.
M302278]
Length = 178
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT RVR S++S+ +A+ + F+ +V +++P+
Sbjct: 45 IAVHQSDETLAKMDEWNTRQHGGSGLTQRVRESTISMADAEAQTLAFIKLWVPERSSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|296135421|ref|YP_003642663.1| Exonuclease RNase T and DNA polymerase III [Thiomonas intermedia
K12]
gi|295795543|gb|ADG30333.1| Exonuclease RNase T and DNA polymerase III [Thiomonas intermedia
K12]
Length = 203
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 34/60 (56%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ VL M+ W H SGLTDRVR S+V +A K + F+ KYV +PM G
Sbjct: 58 AIHQSDAVLAGMDAWNQNTHGKSGLTDRVRTSTVDEAQASKAIIAFLKKYVPAGKSPMCG 117
>gi|374618973|ref|ZP_09691507.1| oligoribonuclease (3'->5' exoribonuclease) [gamma proteobacterium
HIMB55]
gi|374302200|gb|EHQ56384.1| oligoribonuclease (3'->5' exoribonuclease) [gamma proteobacterium
HIMB55]
Length = 180
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++ L M+EW H SGL DRVRASS A + +F ++V+P T+PM
Sbjct: 45 IAIHQSDATLAKMDEWNTRTHGESGLVDRVRASSTDEAAATELTLEFFKEWVEPNTSPMC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|345430555|ref|YP_004823676.1| oligoribonuclease [Haemophilus parainfluenzae T3T1]
gi|301156619|emb|CBW16090.1| oligoribonuclease [Haemophilus parainfluenzae T3T1]
Length = 182
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 39/61 (63%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L M+EWCV+ H A+GL +RV+AS ++ A+ + F+ ++V +P+
Sbjct: 46 IAVHQSDELLNKMSEWCVKTHTANGLVERVKASKITERAAELQTLDFLKRWVPKGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|400536369|ref|ZP_10799904.1| oligoribonuclease [Mycobacterium colombiense CECT 3035]
gi|400330451|gb|EJO87949.1| oligoribonuclease [Mycobacterium colombiense CECT 3035]
Length = 215
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++ L M + E H+ SGLTD VRAS+V + A+ + ++ ++VK PKTAP+ G
Sbjct: 45 IHADDAALAAMGDVVAEMHSRSGLTDEVRASTVDVATAEAMVLDYIGEHVKQPKTAPLAG 104
>gi|406913825|gb|EKD53142.1| Oligoribonuclease [uncultured bacterium]
Length = 181
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
E +L +M +W +H SGLT+ +R S+++ EEA+K +F+ KY P TA + G +
Sbjct: 54 ESILGSMVKWNRDHFGESGLTEEIRRSTITTEEAEKETIKFLKKYCAPHTALLAGSSIYM 113
Query: 96 SKELLK 101
+E L+
Sbjct: 114 DREFLR 119
>gi|77456743|ref|YP_346248.1| oligoribonuclease [Pseudomonas fluorescens Pf0-1]
gi|123606183|sp|Q3KIZ7.1|ORN_PSEPF RecName: Full=Oligoribonuclease
gi|77380746|gb|ABA72259.1| oligoribonuclease [Pseudomonas fluorescens Pf0-1]
Length = 180
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++EVL M+EW H SGLT RVR S VS+ EA+ F+ ++V +P+
Sbjct: 45 IAIHHSDEVLARMDEWNTRTHGNSGLTQRVRESRVSMAEAEAETIAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|448083951|ref|XP_004195482.1| Piso0_004872 [Millerozyma farinosa CBS 7064]
gi|359376904|emb|CCE85287.1| Piso0_004872 [Millerozyma farinosa CBS 7064]
Length = 287
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRAS-SVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+YY +E L MN+WCV H SGLT ++ + S +++ + L +++ KYV+P A + G
Sbjct: 129 VYYPKETLDTMNQWCVNQHGKSGLTAKILDNPSSTLQIVETNLLEYIKKYVEPNKAVLAG 188
>gi|254509115|ref|ZP_05121216.1| oligoribonuclease [Vibrio parahaemolyticus 16]
gi|219547953|gb|EED24977.1| oligoribonuclease [Vibrio parahaemolyticus 16]
Length = 181
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ E L+ M+EWC H SGL RVRAS V+ ++A ++ +F+ K+V +P+
Sbjct: 46 LAIHQPESELEKMDEWCTTTHTGSGLVARVRASQVTEQDAIRQTIEFLEKWVPKGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|386826338|ref|ZP_10113445.1| oligoribonuclease (3'->5' exoribonuclease) [Beggiatoa alba B18LD]
gi|386427222|gb|EIJ41050.1| oligoribonuclease (3'->5' exoribonuclease) [Beggiatoa alba B18LD]
Length = 182
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+Y E +L M+EW HN SGL +RVR S++ + A++ F+ +YV +PM
Sbjct: 46 IAIYQPENLLAAMDEWNTRQHNESGLVNRVRNSTIDLAHAEQITLDFLQQYVPAGKSPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|254804313|ref|YP_003082534.1| oligoribonuclease [Neisseria meningitidis alpha14]
gi|254667855|emb|CBA03898.1| oligoribonuclease [Neisseria meningitidis alpha14]
Length = 215
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L NM+EW H +GLT RVR SS + E +++L F++++V + PM G
Sbjct: 74 AVHQSDELLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPGRATPMCG 133
>gi|225025590|ref|ZP_03714782.1| hypothetical protein EIKCOROL_02492 [Eikenella corrodens ATCC
23834]
gi|224941628|gb|EEG22837.1| hypothetical protein EIKCOROL_02492 [Eikenella corrodens ATCC
23834]
Length = 238
Score = 50.1 bits (118), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 39/60 (65%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L+ M+ W H +GLT RV+ S++S E ++RL F+A+++ T+P+ G
Sbjct: 93 AIHQSDELLEGMDAWNTSTHERTGLTQRVKDSTLSEAEVEQRLLDFIAQWIPQGTSPLCG 152
>gi|443289210|ref|ZP_21028304.1| Oligoribonuclease [Micromonospora lupini str. Lupac 08]
gi|385887888|emb|CCH16378.1| Oligoribonuclease [Micromonospora lupini str. Lupac 08]
Length = 196
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ +E L+ M E H SGLT+ VR S+V++ EA+ R+ ++V+ +VK P+TAP+ G
Sbjct: 45 IHADEAALEAMPEIVQTMHAKSGLTEEVRRSAVTLAEAEDRVLEYVSTFVKDPRTAPLCG 104
>gi|254672653|emb|CBA06469.1| oligoribonuclease [Neisseria meningitidis alpha275]
Length = 215
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L NM+EW H +GLT RVR SS + E +++L F++++V + PM G
Sbjct: 74 AVHQSDELLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPGRATPMCG 133
>gi|445495698|ref|ZP_21462742.1| oligoribonuclease Orn [Janthinobacterium sp. HH01]
gi|444791859|gb|ELX13406.1| oligoribonuclease Orn [Janthinobacterium sp. HH01]
Length = 198
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M+ W H SGL DRV+AS+VS EA++ L +F+ ++V APM G
Sbjct: 64 AIHQSDETLDKMDAWNKGTHGRSGLIDRVKASTVSEAEAEEELIKFMKQWVPKGKAPMCG 123
>gi|398832391|ref|ZP_10590550.1| oligoribonuclease (3'->5' exoribonuclease) [Herbaspirillum sp.
YR522]
gi|398223167|gb|EJN09517.1| oligoribonuclease (3'->5' exoribonuclease) [Herbaspirillum sp.
YR522]
Length = 197
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 37/59 (62%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+ W H SGL DRV+AS+V+ EA+ L +F+ KYV +PM G
Sbjct: 64 VHQSDELLDGMDAWNKGTHGRSGLIDRVKASTVTEAEAEAVLVEFLRKYVPAGKSPMCG 122
>gi|385341291|ref|YP_005895162.1| oligoribonuclease [Neisseria meningitidis M01-240149]
gi|385856588|ref|YP_005903100.1| oligoribonuclease [Neisseria meningitidis NZ-05/33]
gi|416164447|ref|ZP_11607212.1| oligoribonuclease [Neisseria meningitidis N1568]
gi|416174333|ref|ZP_11609167.1| oligoribonuclease [Neisseria meningitidis OX99.30304]
gi|421545181|ref|ZP_15991245.1| oligoribonuclease [Neisseria meningitidis NM140]
gi|421547229|ref|ZP_15993267.1| oligoribonuclease [Neisseria meningitidis NM183]
gi|421548201|ref|ZP_15994229.1| oligoribonuclease [Neisseria meningitidis NM2781]
gi|421551011|ref|ZP_15997012.1| oligoribonuclease [Neisseria meningitidis 69166]
gi|421553434|ref|ZP_15999396.1| oligoribonuclease [Neisseria meningitidis NM576]
gi|421557853|ref|ZP_16003750.1| oligoribonuclease [Neisseria meningitidis 80179]
gi|421559860|ref|ZP_16005727.1| oligoribonuclease [Neisseria meningitidis 92045]
gi|421561887|ref|ZP_16007724.1| exonuclease family protein [Neisseria meningitidis NM2657]
gi|421566257|ref|ZP_16012013.1| oligoribonuclease [Neisseria meningitidis NM3081]
gi|421568359|ref|ZP_16014084.1| oligoribonuclease [Neisseria meningitidis NM3001]
gi|433472231|ref|ZP_20429609.1| exonuclease family protein [Neisseria meningitidis 68094]
gi|433474185|ref|ZP_20431539.1| exonuclease family protein [Neisseria meningitidis 97021]
gi|433478413|ref|ZP_20435722.1| exonuclease family protein [Neisseria meningitidis 70012]
gi|433482608|ref|ZP_20439863.1| exonuclease family protein [Neisseria meningitidis 2006087]
gi|433484615|ref|ZP_20441834.1| exonuclease family protein [Neisseria meningitidis 2002038]
gi|433486859|ref|ZP_20444048.1| exonuclease family protein [Neisseria meningitidis 97014]
gi|433522931|ref|ZP_20479609.1| exonuclease family protein [Neisseria meningitidis 61103]
gi|433526831|ref|ZP_20483453.1| exonuclease family protein [Neisseria meningitidis 69096]
gi|433539597|ref|ZP_20496064.1| exonuclease family protein [Neisseria meningitidis 70030]
gi|325127521|gb|EGC50447.1| oligoribonuclease [Neisseria meningitidis N1568]
gi|325129519|gb|EGC52346.1| oligoribonuclease [Neisseria meningitidis OX99.30304]
gi|325201497|gb|ADY96951.1| oligoribonuclease [Neisseria meningitidis M01-240149]
gi|325207477|gb|ADZ02929.1| oligoribonuclease [Neisseria meningitidis NZ-05/33]
gi|402321258|gb|EJU56733.1| oligoribonuclease [Neisseria meningitidis NM140]
gi|402321592|gb|EJU57065.1| oligoribonuclease [Neisseria meningitidis NM183]
gi|402326923|gb|EJU62321.1| oligoribonuclease [Neisseria meningitidis NM2781]
gi|402328111|gb|EJU63491.1| oligoribonuclease [Neisseria meningitidis NM576]
gi|402329548|gb|EJU64909.1| oligoribonuclease [Neisseria meningitidis 69166]
gi|402333572|gb|EJU68874.1| oligoribonuclease [Neisseria meningitidis 80179]
gi|402334426|gb|EJU69714.1| oligoribonuclease [Neisseria meningitidis 92045]
gi|402336272|gb|EJU71533.1| exonuclease family protein [Neisseria meningitidis NM2657]
gi|402340866|gb|EJU76057.1| oligoribonuclease [Neisseria meningitidis NM3081]
gi|402341529|gb|EJU76703.1| oligoribonuclease [Neisseria meningitidis NM3001]
gi|432206857|gb|ELK62858.1| exonuclease family protein [Neisseria meningitidis 68094]
gi|432207503|gb|ELK63492.1| exonuclease family protein [Neisseria meningitidis 97021]
gi|432213307|gb|ELK69229.1| exonuclease family protein [Neisseria meningitidis 70012]
gi|432214628|gb|ELK70525.1| exonuclease family protein [Neisseria meningitidis 2006087]
gi|432219701|gb|ELK75537.1| exonuclease family protein [Neisseria meningitidis 2002038]
gi|432220458|gb|ELK76278.1| exonuclease family protein [Neisseria meningitidis 97014]
gi|432257083|gb|ELL12389.1| exonuclease family protein [Neisseria meningitidis 61103]
gi|432258884|gb|ELL14164.1| exonuclease family protein [Neisseria meningitidis 69096]
gi|432271617|gb|ELL26740.1| exonuclease family protein [Neisseria meningitidis 70030]
Length = 187
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L NM+EW H +GLT RVR SS + E +++L F++++V + PM G
Sbjct: 46 AVHQSDELLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPGRATPMCG 105
>gi|351722973|ref|NP_001238542.1| uncharacterized protein LOC100527858 [Glycine max]
gi|255633388|gb|ACU17051.1| unknown [Glycine max]
Length = 242
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 34/50 (68%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV 82
++ +E L M EWC HH ASGLT +V S++S EA++++ +FV +YV
Sbjct: 101 IHQTKECLDRMGEWCQSHHAASGLTKKVLKSTISEGEAEEQVIEFVKRYV 150
>gi|398995245|ref|ZP_10698133.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM21]
gi|398130444|gb|EJM19782.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas sp. GM21]
Length = 180
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++E+L M+EW H SGLT RVR S +S+ EA+ F+ +V +P+
Sbjct: 45 IAIHHSDEILAGMDEWNTRQHGGSGLTQRVRDSRISMAEAEAETIAFLELWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|325577877|ref|ZP_08148110.1| oligoribonuclease [Haemophilus parainfluenzae ATCC 33392]
gi|325160307|gb|EGC72434.1| oligoribonuclease [Haemophilus parainfluenzae ATCC 33392]
Length = 200
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 39/61 (63%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L M+EWCV+ H A+GL +RV+AS ++ A+ + F+ ++V +P+
Sbjct: 64 IAVHQSDELLNKMSEWCVKTHTANGLVERVKASKITERAAELQTLDFLKRWVPKGASPIC 123
Query: 91 G 91
G
Sbjct: 124 G 124
>gi|194910229|ref|XP_001982095.1| GG12405 [Drosophila erecta]
gi|190656733|gb|EDV53965.1| GG12405 [Drosophila erecta]
Length = 184
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 40/69 (57%), Gaps = 1/69 (1%)
Query: 23 LQTQGTCKCGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV 82
++++ TC + + +EV MN+WC+E H SGL DR ++S V E+A + ++ + V
Sbjct: 42 VKSEATC-FAINHPQEVYDTMNDWCMEQHYKSGLVDRCKSSDVKPEQASNLVLSYLERNV 100
Query: 83 KPKTAPMVG 91
+ P+ G
Sbjct: 101 PKRACPLGG 109
>gi|357148958|ref|XP_003574951.1| PREDICTED: oligoribonuclease-like [Brachypodium distachyon]
Length = 247
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 36/56 (64%)
Query: 36 NEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+++ L NM EWC HH +SGLT+RV S +S +A+K++ F+ ++V T + G
Sbjct: 111 SKDCLDNMGEWCKTHHASSGLTERVLQSEISEHDAEKQVLDFLMRHVGSGTPLIAG 166
>gi|313669085|ref|YP_004049369.1| oligoribonuclease [Neisseria lactamica 020-06]
gi|313006547|emb|CBN88011.1| putative oligoribonuclease [Neisseria lactamica 020-06]
Length = 187
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L NM+EW H +GLT RVR SS + E +++L F+++++ + PM G
Sbjct: 46 AVHQSDELLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWIPERATPMCG 105
>gi|401839659|gb|EJT42778.1| REX2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 271
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 24 QTQGTCKCGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK 83
Q Q + ++ EV+ MN+WC+EHH SGLT +V A+ ++ + + L +++ +Y+
Sbjct: 93 QGQSHYESVIHCGPEVMNKMNQWCIEHHGESGLTAKVLATDKTLAQVEAELLEYIQRYIP 152
Query: 84 PK 85
K
Sbjct: 153 DK 154
>gi|359453798|ref|ZP_09243101.1| oligoribonuclease [Pseudoalteromonas sp. BSi20495]
gi|358049114|dbj|GAA79350.1| oligoribonuclease [Pseudoalteromonas sp. BSi20495]
Length = 181
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ N+E+L M+EWC H SGLT R +AS+ A ++ F+ ++V T+PM G
Sbjct: 47 AIHQNDELLNGMDEWCTTQHGKSGLTARCKASTFDEAYAVEQTLAFLKQWVPAGTSPMCG 106
>gi|340361439|ref|ZP_08683866.1| oligoribonuclease [Neisseria macacae ATCC 33926]
gi|339888617|gb|EGQ78059.1| oligoribonuclease [Neisseria macacae ATCC 33926]
Length = 185
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+EW H +GLT RVR S ++ + +++L F+A+++ K+ PM G
Sbjct: 48 VHQSDELLNGMDEWNTATHGRTGLTQRVRESRLTEADVEQKLLDFIAQWIPEKSTPMCG 106
>gi|365759500|gb|EHN01284.1| Rex2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii
VIN7]
Length = 210
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 37/62 (59%)
Query: 24 QTQGTCKCGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK 83
Q Q + ++ EV+ MN+WC+EHH SGLT +V A+ ++ + + L +++ +Y+
Sbjct: 32 QGQSHYESVIHCGPEVMNKMNQWCIEHHGESGLTAKVLATDKTLAQVEAELLEYIQRYIP 91
Query: 84 PK 85
K
Sbjct: 92 DK 93
>gi|344943082|ref|ZP_08782369.1| Oligoribonuclease [Methylobacter tundripaludum SV96]
gi|344260369|gb|EGW20641.1| Oligoribonuclease [Methylobacter tundripaludum SV96]
Length = 181
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 40/67 (59%), Gaps = 1/67 (1%)
Query: 25 TQGTCKCGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKP 84
QG ++ ++ L M+EW HH SGL RV+AS++ EEA+++ +F+ ++V
Sbjct: 41 AQGPV-LAVHQSDAALGAMDEWNQHHHGQSGLIARVKASTIDAEEAERQTIEFLKQWVPE 99
Query: 85 KTAPMVG 91
T+P+ G
Sbjct: 100 NTSPICG 106
>gi|149377531|ref|ZP_01895272.1| oligoribonuclease [Marinobacter algicola DG893]
gi|149358223|gb|EDM46704.1| oligoribonuclease [Marinobacter algicola DG893]
Length = 180
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++++L M+EWC H SGLT RV+ S +A+++ +F+ +Y++P +P+
Sbjct: 45 IAVHQSDKLLSEMDEWCTRTHGESGLTQRVKDSKYGEIDAEQKTLEFLQRYLEPGQSPLC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|422908874|ref|ZP_16943536.1| oligoribonuclease [Vibrio cholerae HE-09]
gi|341637662|gb|EGS62339.1| oligoribonuclease [Vibrio cholerae HE-09]
Length = 181
Score = 49.7 bits (117), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 34/59 (57%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+Y E L M+EWC H ASGL RVR S VS +EA ++ F+ ++V +P+ G
Sbjct: 48 IYQPESELAKMDEWCTTTHTASGLVARVRQSQVSEDEAIEQTLAFLKQWVPEGKSPICG 106
>gi|427403407|ref|ZP_18894404.1| oligoribonuclease [Massilia timonae CCUG 45783]
gi|425717878|gb|EKU80833.1| oligoribonuclease [Massilia timonae CCUG 45783]
Length = 194
Score = 49.7 bits (117), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M+ W H SGL DRV+AS+VS +A++ L F+ +YV +PM G
Sbjct: 60 AIHQSDETLDKMDNWNKGTHGKSGLIDRVKASTVSEAQAEQELIAFLKQYVPSNKSPMCG 119
>gi|262393026|ref|YP_003284880.1| oligoribonuclease [Vibrio sp. Ex25]
gi|451972992|ref|ZP_21926191.1| oligoribonuclease [Vibrio alginolyticus E0666]
gi|262336620|gb|ACY50415.1| oligoribonuclease [Vibrio sp. Ex25]
gi|451931061|gb|EMD78756.1| oligoribonuclease [Vibrio alginolyticus E0666]
Length = 181
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ EE L M++WC H ASGL +RVR S +S ++A + +F+ K+V +P+
Sbjct: 46 LAIHQPEEELAKMDDWCTNTHTASGLVERVRNSKISEQDAVAQTIEFLEKWVPKGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|416050979|ref|ZP_11577185.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype e
str. SC1083]
gi|347993503|gb|EGY34858.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype e
str. SC1083]
Length = 182
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ + +L M+EWCV+ H A+GL +RV+AS ++ A+ + F+ KYV +P+
Sbjct: 46 LAIHQPDALLNKMSEWCVKTHTANGLIERVKASKLTKRAAELQTLDFLKKYVPKGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|219872207|ref|YP_002476582.1| oligoribonuclease [Haemophilus parasuis SH0165]
gi|219692411|gb|ACL33634.1| oligoribonuclease [Haemophilus parasuis SH0165]
Length = 168
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+Y +E+L M+EWCV+ H A+GL +RV+ S ++ A+ + F+ K+V +P+
Sbjct: 32 LAVYQPDELLNKMSEWCVKTHTANGLVERVKQSKLTERAAELQTLDFLKKWVPKGASPIC 91
Query: 91 G 91
G
Sbjct: 92 G 92
>gi|269966857|ref|ZP_06180930.1| oligoribonuclease [Vibrio alginolyticus 40B]
gi|269828524|gb|EEZ82785.1| oligoribonuclease [Vibrio alginolyticus 40B]
Length = 219
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ EE L M++WC H ASGL +RVR S +S ++A + +F+ K+V +P+
Sbjct: 84 LAIHQPEEELAKMDDWCTNTHTASGLVERVRNSQISEQDAVAQTIEFLEKWVPKGASPIC 143
Query: 91 G 91
G
Sbjct: 144 G 144
>gi|192360800|ref|YP_001983571.1| oligoribonuclease [Cellvibrio japonicus Ueda107]
gi|190686965|gb|ACE84643.1| oligoribonuclease [Cellvibrio japonicus Ueda107]
Length = 185
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + ++ NM+EW H SGLT RVR S VSIE+A+ F+ ++V +P+ G
Sbjct: 50 AIHQPDSIMLNMDEWNTNQHGKSGLTQRVRDSQVSIEQAEAATIAFLEQWVPKGKSPICG 109
>gi|77163872|ref|YP_342397.1| oligoribonuclease [Nitrosococcus oceani ATCC 19707]
gi|76882186|gb|ABA56867.1| Exonuclease [Nitrosococcus oceani ATCC 19707]
Length = 183
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ + +L NM+EW HN SGL +RVR S +S A++R +F+ ++ ++PM
Sbjct: 46 IAVHQKDIILDNMDEWNTRQHNKSGLVERVRHSLISEAAAEQRTLEFLNRHTPANSSPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|261867655|ref|YP_003255577.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans D11S-1]
gi|365967447|ref|YP_004949009.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans ANH9381]
gi|415767763|ref|ZP_11483393.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans D17P-2]
gi|444345686|ref|ZP_21153693.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype c
str. AAS4A]
gi|261412987|gb|ACX82358.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans D11S-1]
gi|348658307|gb|EGY75878.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans D17P-2]
gi|365746360|gb|AEW77265.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans ANH9381]
gi|443542549|gb|ELT52870.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype c
str. AAS4A]
Length = 182
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ +L M+EWCV+ H A+GL +RV+AS ++ A+ + F+ KYV +P+ G
Sbjct: 52 DALLNKMSEWCVKTHTANGLIERVKASKLTKRAAELQTLDFLKKYVPKGASPICG 106
>gi|350419392|ref|XP_003492165.1| PREDICTED: probable oligoribonuclease-like [Bombus impatiens]
Length = 186
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 32/53 (60%)
Query: 39 VLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
VL+NMNEWC H +GL + + S S+++A++ L + Y+ K+ P+ G
Sbjct: 55 VLENMNEWCTNWHTKTGLIAKSKCSKYSLKDAEQMLLNLLKNYIPSKSCPLAG 107
>gi|254435405|ref|ZP_05048912.1| exonuclease superfamily [Nitrosococcus oceani AFC27]
gi|207088516|gb|EDZ65788.1| exonuclease superfamily [Nitrosococcus oceani AFC27]
Length = 169
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 33/53 (62%)
Query: 39 VLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+L NM+EW HN SGL +RVR S +S A++R +F+ ++ ++PM G
Sbjct: 40 ILDNMDEWNTRQHNKSGLVERVRHSLISEAAAEQRTLEFLNRHTPANSSPMCG 92
>gi|417320812|ref|ZP_12107353.1| oligoribonuclease [Vibrio parahaemolyticus 10329]
gi|433658922|ref|YP_007276301.1| 3'-to-5' oligoribonuclease (orn) [Vibrio parahaemolyticus BB22OP]
gi|328472277|gb|EGF43147.1| oligoribonuclease [Vibrio parahaemolyticus 10329]
gi|432509610|gb|AGB11127.1| 3'-to-5' oligoribonuclease (orn) [Vibrio parahaemolyticus BB22OP]
Length = 181
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
EE L M++WC H ASGL +RVR S +S ++A + +F+ K+V +P+ G
Sbjct: 52 EEELAKMDDWCTNTHTASGLVERVRNSKISEQDAVTQTIEFLEKWVPKGVSPICG 106
>gi|260361286|ref|ZP_05774394.1| oligoribonuclease [Vibrio parahaemolyticus K5030]
gi|308114248|gb|EFO51788.1| oligoribonuclease [Vibrio parahaemolyticus K5030]
Length = 148
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ EE L M++WC H ASGL +RVR S +S ++A + +F+ K+V +P+ G
Sbjct: 47 AVHQPEEELAKMDDWCTNTHTASGLVERVRNSKISEQDAVAQTIEFLEKWVPKGVSPICG 106
>gi|381161124|ref|ZP_09870355.1| oligoribonuclease (3'->5' exoribonuclease) [Thiorhodovibrio sp.
970]
gi|380877360|gb|EIC19453.1| oligoribonuclease (3'->5' exoribonuclease) [Thiorhodovibrio sp.
970]
Length = 182
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/67 (34%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 25 TQGTCKCGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKP 84
+G C + +EEVL M++W EHH SGL +RVR S EA++ + +F+ ++ +
Sbjct: 41 AEGPC-IAIRQSEEVLAAMDDWNREHHGESGLIERVRFSESDEAEAEQEMLRFLQRHCQA 99
Query: 85 KTAPMVG 91
+P+ G
Sbjct: 100 GKSPLCG 106
>gi|343502526|ref|ZP_08740376.1| oligoribonuclease [Vibrio tubiashii ATCC 19109]
gi|418479222|ref|ZP_13048312.1| oligoribonuclease [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
gi|342814251|gb|EGU49199.1| oligoribonuclease [Vibrio tubiashii ATCC 19109]
gi|384573147|gb|EIF03644.1| oligoribonuclease [Vibrio tubiashii NCIMB 1337 = ATCC 19106]
Length = 181
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ EE L M+EWC H SGL RVR S + +EA ++ +F+ K+V +P+
Sbjct: 46 LAIHQPEEELVKMDEWCTTTHTGSGLVKRVRESKIDEQEAIRQTIEFLEKWVPKGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|134094115|ref|YP_001099190.1| oligoribonuclease [Herminiimonas arsenicoxydans]
gi|133738018|emb|CAL61063.1| oligoribonuclease [Herminiimonas arsenicoxydans]
Length = 198
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M+ W H SGL +RV+AS+VS +A++ L +F+ KYV +PM G
Sbjct: 64 AIHQSDETLDKMDAWNKGTHGRSGLIERVKASTVSEAQAEEELIEFLKKYVPKGKSPMCG 123
>gi|423689606|ref|ZP_17664126.1| oligoribonuclease [Pseudomonas fluorescens SS101]
gi|387997822|gb|EIK59151.1| oligoribonuclease [Pseudomonas fluorescens SS101]
Length = 180
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++ VL M+EW H SGLT RVR S +S+ EA+ + F+ K+V +P+
Sbjct: 45 IAIHHSDAVLATMDEWNTRTHGNSGLTQRVRDSRISMAEAEAQTIAFLEKWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|28899597|ref|NP_799202.1| oligoribonuclease [Vibrio parahaemolyticus RIMD 2210633]
gi|153840401|ref|ZP_01993068.1| oligoribonuclease [Vibrio parahaemolyticus AQ3810]
gi|260876662|ref|ZP_05889017.1| oligoribonuclease [Vibrio parahaemolyticus AN-5034]
gi|260902310|ref|ZP_05910705.1| oligoribonuclease [Vibrio parahaemolyticus AQ4037]
gi|31076785|sp|Q87L01.1|ORN_VIBPA RecName: Full=Oligoribonuclease
gi|28807833|dbj|BAC61086.1| oligoribonuclease [Vibrio parahaemolyticus RIMD 2210633]
gi|149745937|gb|EDM57067.1| oligoribonuclease [Vibrio parahaemolyticus AQ3810]
gi|308093946|gb|EFO43641.1| oligoribonuclease [Vibrio parahaemolyticus AN-5034]
gi|308110954|gb|EFO48494.1| oligoribonuclease [Vibrio parahaemolyticus AQ4037]
Length = 181
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
EE L M++WC H ASGL +RVR S +S ++A + +F+ K+V +P+ G
Sbjct: 52 EEELAKMDDWCTNTHTASGLVERVRNSKISEQDAVAQTIEFLEKWVPKGVSPICG 106
>gi|93006558|ref|YP_580995.1| oligoribonuclease [Psychrobacter cryohalolentis K5]
gi|92394236|gb|ABE75511.1| Exonuclease [Psychrobacter cryohalolentis K5]
Length = 195
Score = 49.3 bits (116), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ +++ L M++W + H SGL DRVR S+V++ EA+ +F+ K+V +PM G
Sbjct: 59 AIKVSDQKLNGMDDWNTKQHGQSGLVDRVRRSTVTLAEAEAETIKFLNKWVDSGKSPMCG 118
>gi|115396528|ref|XP_001213903.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
gi|114193472|gb|EAU35172.1| conserved hypothetical protein [Aspergillus terreus NIH2624]
Length = 186
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/75 (38%), Positives = 40/75 (53%), Gaps = 2/75 (2%)
Query: 39 VLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG-EYHTS 96
VL NMN WCV+ H SGLT V+AS+ + E A L Q++ +YV +P+ + G H
Sbjct: 57 VLANMNAWCVDTHGRSGLTAAVQASTTTAETAAAELLQYIQRYVPEPRRGVLAGNSVHAD 116
Query: 97 KELLKDSDHFLVFSW 111
K L + V W
Sbjct: 117 KAFLTRGPYARVMEW 131
>gi|348171933|ref|ZP_08878827.1| oligoribonuclease [Saccharopolyspora spinosa NRRL 18395]
Length = 204
Score = 48.9 bits (115), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKP-KTAPMVG 91
++ +EE L M + E H+ SGLT+ VR S+V++EEA++R+ ++ +YV ++AP+ G
Sbjct: 40 IHADEEKLAGMPDVVREMHDRSGLTEEVRRSTVTLEEAEQRVLDYIRQYVPDGRSAPLAG 99
>gi|296112880|ref|YP_003626818.1| oligoribonuclease [Moraxella catarrhalis RH4]
gi|416155736|ref|ZP_11604029.1| oligoribonuclease [Moraxella catarrhalis 101P30B1]
gi|416217261|ref|ZP_11624210.1| oligoribonuclease [Moraxella catarrhalis 7169]
gi|416222031|ref|ZP_11625995.1| oligoribonuclease [Moraxella catarrhalis 103P14B1]
gi|416227595|ref|ZP_11627203.1| oligoribonuclease [Moraxella catarrhalis 46P47B1]
gi|416235241|ref|ZP_11630065.1| oligoribonuclease [Moraxella catarrhalis 12P80B1]
gi|416239384|ref|ZP_11631934.1| oligoribonuclease [Moraxella catarrhalis BC1]
gi|416241821|ref|ZP_11632955.1| oligoribonuclease [Moraxella catarrhalis BC7]
gi|416247608|ref|ZP_11635791.1| oligoribonuclease [Moraxella catarrhalis BC8]
gi|416250213|ref|ZP_11637222.1| oligoribonuclease [Moraxella catarrhalis CO72]
gi|416254473|ref|ZP_11638739.1| oligoribonuclease [Moraxella catarrhalis O35E]
gi|421779694|ref|ZP_16216186.1| oligoribonuclease [Moraxella catarrhalis RH4]
gi|295920574|gb|ADG60925.1| oligoribonuclease [Moraxella catarrhalis BBH18]
gi|326561112|gb|EGE11477.1| oligoribonuclease [Moraxella catarrhalis 7169]
gi|326564455|gb|EGE14682.1| oligoribonuclease [Moraxella catarrhalis 103P14B1]
gi|326564568|gb|EGE14793.1| oligoribonuclease [Moraxella catarrhalis 12P80B1]
gi|326564778|gb|EGE14990.1| oligoribonuclease [Moraxella catarrhalis 46P47B1]
gi|326567572|gb|EGE17687.1| oligoribonuclease [Moraxella catarrhalis BC1]
gi|326569420|gb|EGE19480.1| oligoribonuclease [Moraxella catarrhalis BC8]
gi|326571382|gb|EGE21397.1| oligoribonuclease [Moraxella catarrhalis BC7]
gi|326575336|gb|EGE25264.1| oligoribonuclease [Moraxella catarrhalis CO72]
gi|326576579|gb|EGE26486.1| oligoribonuclease [Moraxella catarrhalis 101P30B1]
gi|326577403|gb|EGE27287.1| oligoribonuclease [Moraxella catarrhalis O35E]
gi|407813404|gb|EKF84186.1| oligoribonuclease [Moraxella catarrhalis RH4]
Length = 195
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ ++ VL M++W H SGL DRVR S++++ +A+ + +F++K+V +PM G
Sbjct: 59 AIKVSDVVLNRMDDWNKNQHGQSGLIDRVRRSTITLADAEAQTIEFLSKWVDAGISPMCG 118
>gi|302659350|ref|XP_003021366.1| hypothetical protein TRV_04521 [Trichophyton verrucosum HKI 0517]
gi|291185262|gb|EFE40748.1| hypothetical protein TRV_04521 [Trichophyton verrucosum HKI 0517]
Length = 172
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 40/77 (51%), Gaps = 2/77 (2%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKP-KTAPMVG-EYH 94
++VL MN WC++ H SGLT V +SS + EEA L ++ +YV +TA + G H
Sbjct: 39 QDVLDRMNAWCIDTHGRSGLTAAVLSSSTTAEEAACDLLAYIKQYVPTQRTALLAGNSVH 98
Query: 95 TSKELLKDSDHFLVFSW 111
+ L + V W
Sbjct: 99 ADRAFLAKPPYAQVLDW 115
>gi|91228387|ref|ZP_01262313.1| oligoribonuclease [Vibrio alginolyticus 12G01]
gi|91188028|gb|EAS74334.1| oligoribonuclease [Vibrio alginolyticus 12G01]
Length = 181
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ EE L M++WC H ASGL +RVR S +S ++A + +F+ K+V +P+
Sbjct: 46 LAIHQPEEELVKMDDWCTNTHTASGLVERVRNSQISEQDAVAQTIEFLEKWVPKGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|444344965|ref|ZP_21153089.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype b
str. SCC4092]
gi|443542439|gb|ELT52768.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype b
str. SCC4092]
Length = 204
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ +L M+EWCV+ H A+GL +RV+AS ++ A+ + F+ KYV +P+ G
Sbjct: 74 DALLNKMSEWCVKTHTANGLIERVKASKLTKHAAELQTLDFLKKYVPKGASPICG 128
>gi|403218162|emb|CCK72653.1| hypothetical protein KNAG_0L00300 [Kazachstania naganishii CBS
8797]
Length = 280
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 38/59 (64%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++Y++ V+ +MN+WCVEHH SGLT +V S+ + E+ + L ++ +++ ++G
Sbjct: 85 VHYDKSVMDSMNQWCVEHHGDSGLTKQVLESTKTREQVESELLDYIKQFIPEGNIGVLG 143
>gi|395647919|ref|ZP_10435769.1| oligoribonuclease [Pseudomonas extremaustralis 14-3 substr. 14-3b]
Length = 180
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++ VL M+EW H SGLT RVR S VS+ EA+ F+ K+V +P+
Sbjct: 45 IAIHHSDAVLATMDEWNTRTHGNSGLTQRVRDSRVSMAEAEAETIAFLEKWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|350570451|ref|ZP_08938807.1| oligoribonuclease [Neisseria wadsworthii 9715]
gi|349796509|gb|EGZ50294.1| oligoribonuclease [Neisseria wadsworthii 9715]
Length = 182
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M++W H +GL RVR S ++ E +++L F+A+++ KT+PM G
Sbjct: 47 VHQSDEILNAMDDWNTATHTRTGLVQRVRESKLTEAEVEQKLLDFMAQWIPEKTSPMCG 105
>gi|110835071|ref|YP_693930.1| oligoribonuclease [Alcanivorax borkumensis SK2]
gi|123050323|sp|Q0VME0.1|ORN_ALCBS RecName: Full=Oligoribonuclease
gi|110648182|emb|CAL17658.1| oligoribonuclease [Alcanivorax borkumensis SK2]
Length = 181
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ +L M+EW HHN SGL RV+AS+V+ A+ + F+ +YV+ +PM G
Sbjct: 47 AVHQSDALLDGMDEWNTTHHNNSGLVARVKASTVNDAAAESQTIAFLEQYVEAGMSPMCG 106
>gi|149927960|ref|ZP_01916210.1| oligoribonuclease [Limnobacter sp. MED105]
gi|149823399|gb|EDM82632.1| oligoribonuclease [Limnobacter sp. MED105]
Length = 191
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++++L M+ W H SGLT RV+ S + +A++ L +F+ KY+ P +PM G
Sbjct: 39 AIHQSDDILAGMDAWNTSTHGKSGLTARVKESVIDEAQAEELLIEFLTKYIGPGKSPMCG 98
>gi|395498588|ref|ZP_10430167.1| oligoribonuclease [Pseudomonas sp. PAMC 25886]
gi|395799677|ref|ZP_10478957.1| oligoribonuclease [Pseudomonas sp. Ag1]
gi|421142872|ref|ZP_15602838.1| oligoribonuclease [Pseudomonas fluorescens BBc6R8]
gi|395336182|gb|EJF68043.1| oligoribonuclease [Pseudomonas sp. Ag1]
gi|404506055|gb|EKA20059.1| oligoribonuclease [Pseudomonas fluorescens BBc6R8]
Length = 180
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++ VL M+EW H SGLT RVR S VS+ EA+ F+ K+V +P+
Sbjct: 45 IAIHHSDAVLATMDEWNTRTHGNSGLTQRVRDSRVSMAEAEAETIAFLEKWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|416076629|ref|ZP_11585626.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype b
str. SCC1398]
gi|348004769|gb|EGY45266.1| oligoribonuclease [Aggregatibacter actinomycetemcomitans serotype b
str. SCC1398]
Length = 182
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ +L M+EWCV+ H A+GL +RV+AS ++ A+ + F+ KYV +P+ G
Sbjct: 52 DALLNKMSEWCVKTHTANGLIERVKASKLTKHAAELQTLDFLKKYVPKGASPICG 106
>gi|294669159|ref|ZP_06734240.1| oligoribonuclease [Neisseria elongata subsp. glycolytica ATCC
29315]
gi|291308903|gb|EFE50146.1| oligoribonuclease [Neisseria elongata subsp. glycolytica ATCC
29315]
Length = 185
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 37/59 (62%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+ W H +GLT RVR S ++ E +++L F+A+++ K+ PM G
Sbjct: 48 VHQSDELLDGMDAWNTATHGRTGLTQRVRESQLTEAEVEQKLLDFIAQWIPEKSTPMCG 106
>gi|121595648|ref|YP_987544.1| oligoribonuclease [Acidovorax sp. JS42]
gi|166215746|sp|A1WB43.1|ORN_ACISJ RecName: Full=Oligoribonuclease
gi|120607728|gb|ABM43468.1| Exonuclease, RNase T and DNA polymerase III [Acidovorax sp. JS42]
Length = 192
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/69 (34%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 23 LQTQGTCKCGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV 82
L+ +G ++ + VL M+ W H SGL D+VRAS+V+ +A++ L F+++YV
Sbjct: 50 LRVEGPV-FAIHQADAVLDGMDAWNKGTHGRSGLIDKVRASTVTEADAERELLAFLSRYV 108
Query: 83 KPKTAPMVG 91
PM G
Sbjct: 109 PKGVVPMCG 117
>gi|71066107|ref|YP_264834.1| oligoribonuclease [Psychrobacter arcticus 273-4]
gi|71039092|gb|AAZ19400.1| putative oligoribonuclease protein [Psychrobacter arcticus 273-4]
Length = 195
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M++W + H SGL DRVR S+V++ EA+ +F+ K+V +PM G
Sbjct: 67 LNGMDDWNTKQHGQSGLVDRVRRSTVTLAEAEAETLKFLNKWVDSGKSPMCG 118
>gi|149041577|gb|EDL95418.1| REX2, RNA exonuclease 2 homolog (S. cerevisiae), isoform CRA_b
[Rattus norvegicus]
Length = 145
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 43 MNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHTSKELL 100
M++WC EHH SGLT V+ S+V++++A+ FV + P P+ G H K+ L
Sbjct: 1 MSDWCKEHHGKSGLTKAVKESTVTLQQAEYEFLSFVRQQTPPGLCPLAGNSVHADKKFL 59
>gi|329895611|ref|ZP_08271093.1| Oligoribonuclease [gamma proteobacterium IMCC3088]
gi|328922237|gb|EGG29588.1| Oligoribonuclease [gamma proteobacterium IMCC3088]
Length = 169
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 33/60 (55%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ +L M+EW HH ASGL DRVRAS+ A F+ ++V +PM G
Sbjct: 35 AIHQSDAILAGMDEWNTTHHTASGLLDRVRASTTDERAASLETIAFLEQWVPAGKSPMCG 94
>gi|315634034|ref|ZP_07889323.1| oligoribonuclease [Aggregatibacter segnis ATCC 33393]
gi|315477284|gb|EFU68027.1| oligoribonuclease [Aggregatibacter segnis ATCC 33393]
Length = 182
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L M++WCV+ H A+GL +RV+ S ++ A+ + F+ KYV +P+
Sbjct: 46 LAIHQSDELLNKMSDWCVKTHTANGLVERVKNSKLTERAAELQTLDFLKKYVPKGVSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|226288880|gb|EEH44392.1| phosphoglucomutase [Paracoccidioides brasiliensis Pb18]
Length = 806
Score = 48.9 bits (115), Expect = 4e-04, Method: Composition-based stats.
Identities = 25/81 (30%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG- 91
++Y + VL NMN+WC++ H +GLT V +S+ + A + L ++ K+V K ++
Sbjct: 51 IHYPKSVLDNMNDWCIKTHGQTGLTAAVLSSTTTPTAAAEGLLAYIKKHVPQKRIGLLAG 110
Query: 92 -EYHTSKELLKDSDHFLVFSW 111
HT K L + V W
Sbjct: 111 NSVHTDKAFLACEPYADVLEW 131
>gi|410632747|ref|ZP_11343398.1| oligoribonuclease [Glaciecola arctica BSs20135]
gi|410147612|dbj|GAC20265.1| oligoribonuclease [Glaciecola arctica BSs20135]
Length = 181
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+Y +EVL M++WC + H SGLT R R S+V+ ++A ++ F+ +V +P+ G
Sbjct: 47 AIYQPDEVLNGMDQWCTDTHGKSGLTKRCRESNVNEQQAVQQTIAFLEGFVPKGISPLCG 106
>gi|59800509|ref|YP_207221.1| oligoribonuclease [Neisseria gonorrhoeae FA 1090]
gi|194097641|ref|YP_002000679.1| oligoribonuclease [Neisseria gonorrhoeae NCCP11945]
gi|240013354|ref|ZP_04720267.1| oligoribonuclease [Neisseria gonorrhoeae DGI18]
gi|240015799|ref|ZP_04722339.1| oligoribonuclease [Neisseria gonorrhoeae FA6140]
gi|240120427|ref|ZP_04733389.1| oligoribonuclease [Neisseria gonorrhoeae PID24-1]
gi|254492949|ref|ZP_05106120.1| oligoribonuclease [Neisseria gonorrhoeae 1291]
gi|268594024|ref|ZP_06128191.1| oligoribonuclease [Neisseria gonorrhoeae 35/02]
gi|268596076|ref|ZP_06130243.1| oligoribonuclease [Neisseria gonorrhoeae FA19]
gi|268598201|ref|ZP_06132368.1| oligoribonuclease [Neisseria gonorrhoeae MS11]
gi|268600546|ref|ZP_06134713.1| oligoribonuclease [Neisseria gonorrhoeae PID18]
gi|268602779|ref|ZP_06136946.1| oligoribonuclease [Neisseria gonorrhoeae PID1]
gi|268681328|ref|ZP_06148190.1| oligoribonuclease [Neisseria gonorrhoeae PID332]
gi|268683499|ref|ZP_06150361.1| oligoribonuclease [Neisseria gonorrhoeae SK-92-679]
gi|268685805|ref|ZP_06152667.1| oligoribonuclease [Neisseria gonorrhoeae SK-93-1035]
gi|291044651|ref|ZP_06570360.1| oligoribonuclease [Neisseria gonorrhoeae DGI2]
gi|293397760|ref|ZP_06641966.1| oligoribonuclease [Neisseria gonorrhoeae F62]
gi|385334919|ref|YP_005888866.1| oligoribonuclease [Neisseria gonorrhoeae TCDC-NG08107]
gi|81311266|sp|Q5FAH8.1|ORN_NEIG1 RecName: Full=Oligoribonuclease
gi|59717404|gb|AAW88809.1| putative oligo ribonuclease [Neisseria gonorrhoeae FA 1090]
gi|193932931|gb|ACF28755.1| oligoribonuclease [Neisseria gonorrhoeae NCCP11945]
gi|226511989|gb|EEH61334.1| oligoribonuclease [Neisseria gonorrhoeae 1291]
gi|268547413|gb|EEZ42831.1| oligoribonuclease [Neisseria gonorrhoeae 35/02]
gi|268549864|gb|EEZ44883.1| oligoribonuclease [Neisseria gonorrhoeae FA19]
gi|268582332|gb|EEZ47008.1| oligoribonuclease [Neisseria gonorrhoeae MS11]
gi|268584677|gb|EEZ49353.1| oligoribonuclease [Neisseria gonorrhoeae PID18]
gi|268586910|gb|EEZ51586.1| oligoribonuclease [Neisseria gonorrhoeae PID1]
gi|268621612|gb|EEZ54012.1| oligoribonuclease [Neisseria gonorrhoeae PID332]
gi|268623783|gb|EEZ56183.1| oligoribonuclease [Neisseria gonorrhoeae SK-92-679]
gi|268626089|gb|EEZ58489.1| oligoribonuclease [Neisseria gonorrhoeae SK-93-1035]
gi|291011545|gb|EFE03541.1| oligoribonuclease [Neisseria gonorrhoeae DGI2]
gi|291611706|gb|EFF40775.1| oligoribonuclease [Neisseria gonorrhoeae F62]
gi|317163462|gb|ADV07003.1| oligoribonuclease [Neisseria gonorrhoeae TCDC-NG08107]
Length = 187
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++++L NM+EW H +GLT RVR SS + E +++L F+++++ + PM G
Sbjct: 46 AIHQSDDLLDNMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWIPGRATPMCG 105
>gi|417819228|ref|ZP_12465846.1| oligoribonuclease [Vibrio cholerae HE39]
gi|423945777|ref|ZP_17733290.1| exonuclease family protein [Vibrio cholerae HE-40]
gi|423974961|ref|ZP_17736838.1| exonuclease family protein [Vibrio cholerae HE-46]
gi|340042758|gb|EGR03722.1| oligoribonuclease [Vibrio cholerae HE39]
gi|408662249|gb|EKL33211.1| exonuclease family protein [Vibrio cholerae HE-40]
gi|408666337|gb|EKL37130.1| exonuclease family protein [Vibrio cholerae HE-46]
Length = 181
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ E L M+EWC H ASGL RVR S VS EEA + F+ ++V +P+
Sbjct: 46 IAIHQPESELAKMDEWCTTTHTASGLVTRVRQSKVSEEEAIDQTLAFLKQWVPEGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|53805219|ref|YP_113058.1| oligoribonuclease [Methylococcus capsulatus str. Bath]
gi|59798004|sp|Q60BD8.1|ORN_METCA RecName: Full=Oligoribonuclease
gi|53758980|gb|AAU93271.1| oligoribonuclease [Methylococcus capsulatus str. Bath]
Length = 181
Score = 48.9 bits (115), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ E VL M++W + H SGLT+RVR S++ EA+ FV+++V P +P+ G
Sbjct: 47 AIHQPESVLDRMDDWNRKQHGESGLTERVRRSTIGEAEAEHLTLGFVSEWVPPNESPICG 106
>gi|440740154|ref|ZP_20919649.1| oligoribonuclease [Pseudomonas fluorescens BRIP34879]
gi|447919667|ref|YP_007400235.1| oligoribonuclease [Pseudomonas poae RE*1-1-14]
gi|440377839|gb|ELQ14474.1| oligoribonuclease [Pseudomonas fluorescens BRIP34879]
gi|445203530|gb|AGE28739.1| oligoribonuclease [Pseudomonas poae RE*1-1-14]
Length = 180
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++ VL M+EW H SGLT RVR S +S+ EA+ F+ K+V +P+
Sbjct: 45 IAIHHSDAVLATMDEWNTRTHGNSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|388471249|ref|ZP_10145458.1| oligoribonuclease [Pseudomonas synxantha BG33R]
gi|388007946|gb|EIK69212.1| oligoribonuclease [Pseudomonas synxantha BG33R]
Length = 180
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++ VL M+EW H SGLT RVR S +S+ EA+ F+ K+V +P+
Sbjct: 45 IAIHHSDAVLATMDEWNTRTHGNSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|408484149|ref|ZP_11190368.1| oligoribonuclease [Pseudomonas sp. R81]
Length = 180
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++ VL M+EW H SGLT RVR S +S+ EA+ F+ K+V +P+
Sbjct: 45 IAIHHSDAVLATMDEWNTRTHGNSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|229588067|ref|YP_002870186.1| oligoribonuclease [Pseudomonas fluorescens SBW25]
gi|312958644|ref|ZP_07773164.1| exonuclease [Pseudomonas fluorescens WH6]
gi|387891739|ref|YP_006322036.1| oligoribonuclease [Pseudomonas fluorescens A506]
gi|229359933|emb|CAY46787.1| oligoribonuclease [Pseudomonas fluorescens SBW25]
gi|311287187|gb|EFQ65748.1| exonuclease [Pseudomonas fluorescens WH6]
gi|387162366|gb|AFJ57565.1| oligoribonuclease [Pseudomonas fluorescens A506]
Length = 180
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++ VL M+EW H SGLT RVR S +S+ EA+ F+ K+V +P+
Sbjct: 45 IAIHHSDAVLATMDEWNTRTHGNSGLTQRVRDSRISMAEAEAETIAFLEKWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|334565143|ref|ZP_08518134.1| oligoribonuclease [Corynebacterium bovis DSM 20582]
Length = 222
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK-TAPMVG 91
++ ++ L M+++ H +SGLTD +RASSVS+ EA++R+ ++ +++ + AP+ G
Sbjct: 57 IHATDDELAEMDDYVTTMHRSSGLTDEIRASSVSVAEAERRVIDYLRRFIAVEGAAPLAG 116
>gi|117919043|ref|YP_868235.1| oligoribonuclease [Shewanella sp. ANA-3]
gi|166216589|sp|A0KSR0.1|ORN_SHESA RecName: Full=Oligoribonuclease
gi|117611375|gb|ABK46829.1| Exonuclease, RNase T and DNA polymerase III [Shewanella sp. ANA-3]
Length = 181
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +++VL M++W +HH SGL DRVRAS ++ +A + F+ +YV +PM
Sbjct: 46 IAIHQSDDVLAAMDDWNQKHHGESGLIDRVRASQMNEAQAVAQTIAFLEQYVPKGASPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|384083177|ref|ZP_09994352.1| oligoribonuclease [gamma proteobacterium HIMB30]
Length = 182
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ +L M+EW H SGLT RV+ S+ + EA+ R +F+++++ P+ +PM G
Sbjct: 51 QAMLDGMDEWNTRQHGKSGLTARVQNSTTTEVEAETRTIEFLSEFLDPRQSPMCG 105
>gi|153802855|ref|ZP_01957441.1| oligoribonuclease [Vibrio cholerae MZO-3]
gi|124121610|gb|EAY40353.1| oligoribonuclease [Vibrio cholerae MZO-3]
Length = 156
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ E L M+EWC H ASGL RVR S VS EEA + F+ ++V +P+
Sbjct: 46 IAIHQPESELAKMDEWCTTTHTASGLVARVRQSQVSEEEAIDQTLAFLKQWVPEGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|91787582|ref|YP_548534.1| oligoribonuclease [Polaromonas sp. JS666]
gi|91696807|gb|ABE43636.1| Exonuclease [Polaromonas sp. JS666]
Length = 187
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L M+ W H SGL D+V+AS+V+ E A+ +L F+A+YV +P+
Sbjct: 53 LAIHQSDELLDQMDNWNKGTHGRSGLIDKVKASTVTEEAAEAQLLAFLAQYVPKGGSPLC 112
Query: 91 G 91
G
Sbjct: 113 G 113
>gi|258624475|ref|ZP_05719421.1| oligoribonuclease [Vibrio mimicus VM603]
gi|258583224|gb|EEW08027.1| oligoribonuclease [Vibrio mimicus VM603]
Length = 181
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ E L M+EWC H ASGL RVR S VS EEA + F+ ++V +P+
Sbjct: 46 IAIHQPESELAKMDEWCTTTHTASGLVARVRQSQVSEEEAIDQTLAFLKQWVPEGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|229512381|ref|ZP_04401856.1| oligoribonuclease [Vibrio cholerae TMA 21]
gi|229526905|ref|ZP_04416308.1| oligoribonuclease [Vibrio cholerae bv. albensis VL426]
gi|229526997|ref|ZP_04416393.1| oligoribonuclease [Vibrio cholerae 12129(1)]
gi|262172561|ref|ZP_06040239.1| oligoribonuclease [Vibrio mimicus MB-451]
gi|417823471|ref|ZP_12470066.1| oligoribonuclease [Vibrio cholerae HE48]
gi|422921590|ref|ZP_16954806.1| oligoribonuclease [Vibrio cholerae BJG-01]
gi|429885619|ref|ZP_19367199.1| 3'-to-5' oligoribonuclease (orn) [Vibrio cholerae PS15]
gi|229335520|gb|EEO01001.1| oligoribonuclease [Vibrio cholerae 12129(1)]
gi|229336074|gb|EEO01093.1| oligoribonuclease [Vibrio cholerae bv. albensis VL426]
gi|229350596|gb|EEO15541.1| oligoribonuclease [Vibrio cholerae TMA 21]
gi|261893637|gb|EEY39623.1| oligoribonuclease [Vibrio mimicus MB-451]
gi|340048510|gb|EGR09429.1| oligoribonuclease [Vibrio cholerae HE48]
gi|341648547|gb|EGS72602.1| oligoribonuclease [Vibrio cholerae BJG-01]
gi|429227513|gb|EKY33523.1| 3'-to-5' oligoribonuclease (orn) [Vibrio cholerae PS15]
Length = 181
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ E L M+EWC H ASGL RVR S VS EEA + F+ ++V +P+
Sbjct: 46 IAIHQPESELAKMDEWCTTTHTASGLVARVRQSQVSEEEAIDQTLAFLKQWVPEGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|429210443|ref|ZP_19201610.1| oligoribonuclease [Pseudomonas sp. M1]
gi|428159217|gb|EKX05763.1| oligoribonuclease [Pseudomonas sp. M1]
Length = 180
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +EE L M+EW H SGLT RVR S++ +A+ F+ K+V + +P+
Sbjct: 45 IAVHQSEETLAGMDEWNTRQHGQSGLTQRVRESTIDATQAEAMTLAFLEKWVPKRASPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|15640368|ref|NP_229995.1| oligoribonuclease [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121591589|ref|ZP_01678842.1| oligoribonuclease [Vibrio cholerae 2740-80]
gi|121730775|ref|ZP_01682865.1| oligoribonuclease [Vibrio cholerae V52]
gi|147673115|ref|YP_001218609.1| oligoribonuclease [Vibrio cholerae O395]
gi|227080553|ref|YP_002809104.1| oligoribonuclease [Vibrio cholerae M66-2]
gi|227116747|ref|YP_002818643.1| oligoribonuclease [Vibrio cholerae O395]
gi|229506863|ref|ZP_04396371.1| oligoribonuclease [Vibrio cholerae BX 330286]
gi|229508668|ref|ZP_04398162.1| oligoribonuclease [Vibrio cholerae B33]
gi|229516050|ref|ZP_04405501.1| oligoribonuclease [Vibrio cholerae RC9]
gi|229606377|ref|YP_002877025.1| oligoribonuclease [Vibrio cholerae MJ-1236]
gi|254851651|ref|ZP_05241001.1| oligoribonuclease [Vibrio cholerae MO10]
gi|255747141|ref|ZP_05421084.1| oligoribonuclease [Vibrio cholera CIRS 101]
gi|262149017|ref|ZP_06028162.1| oligoribonuclease [Vibrio cholerae INDRE 91/1]
gi|262166933|ref|ZP_06034653.1| oligoribonuclease [Vibrio cholerae RC27]
gi|298501303|ref|ZP_07011100.1| oligoribonuclease [Vibrio cholerae MAK 757]
gi|360036978|ref|YP_004938741.1| oligoribonuclease [Vibrio cholerae O1 str. 2010EL-1786]
gi|379740221|ref|YP_005332190.1| oligoribonuclease [Vibrio cholerae IEC224]
gi|417811414|ref|ZP_12458077.1| oligoribonuclease [Vibrio cholerae HC-49A2]
gi|417815186|ref|ZP_12461822.1| oligoribonuclease [Vibrio cholerae HCUF01]
gi|418331047|ref|ZP_12942001.1| oligoribonuclease [Vibrio cholerae HC-06A1]
gi|418336206|ref|ZP_12945106.1| oligoribonuclease [Vibrio cholerae HC-23A1]
gi|418342585|ref|ZP_12949391.1| oligoribonuclease [Vibrio cholerae HC-28A1]
gi|418347749|ref|ZP_12952486.1| oligoribonuclease [Vibrio cholerae HC-43A1]
gi|419824810|ref|ZP_14348319.1| exonuclease family protein [Vibrio cholerae CP1033(6)]
gi|421315631|ref|ZP_15766204.1| oligoribonuclease [Vibrio cholerae CP1032(5)]
gi|421327569|ref|ZP_15778086.1| oligoribonuclease [Vibrio cholerae CP1042(15)]
gi|421330565|ref|ZP_15781048.1| oligoribonuclease [Vibrio cholerae CP1046(19)]
gi|421334163|ref|ZP_15784634.1| oligoribonuclease [Vibrio cholerae CP1048(21)]
gi|421338062|ref|ZP_15788503.1| oligoribonuclease [Vibrio cholerae HC-20A2]
gi|421345532|ref|ZP_15795919.1| oligoribonuclease [Vibrio cholerae HC-46A1]
gi|422890377|ref|ZP_16932809.1| oligoribonuclease [Vibrio cholerae HC-40A1]
gi|422901174|ref|ZP_16936560.1| oligoribonuclease [Vibrio cholerae HC-48A1]
gi|422905339|ref|ZP_16940204.1| oligoribonuclease [Vibrio cholerae HC-70A1]
gi|422905385|ref|ZP_16940245.1| oligoribonuclease [Vibrio cholerae HC-70A1]
gi|422912083|ref|ZP_16946617.1| oligoribonuclease [Vibrio cholerae HFU-02]
gi|422924559|ref|ZP_16957606.1| oligoribonuclease [Vibrio cholerae HC-38A1]
gi|423143612|ref|ZP_17131233.1| oligoribonuclease [Vibrio cholerae HC-19A1]
gi|423148593|ref|ZP_17135959.1| oligoribonuclease [Vibrio cholerae HC-21A1]
gi|423152371|ref|ZP_17139590.1| oligoribonuclease [Vibrio cholerae HC-22A1]
gi|423155185|ref|ZP_17142326.1| oligoribonuclease [Vibrio cholerae HC-32A1]
gi|423159027|ref|ZP_17146003.1| oligoribonuclease [Vibrio cholerae HC-33A2]
gi|423163704|ref|ZP_17150505.1| oligoribonuclease [Vibrio cholerae HC-48B2]
gi|423729721|ref|ZP_17703047.1| exonuclease family protein [Vibrio cholerae HC-17A1]
gi|423746944|ref|ZP_17711237.1| exonuclease family protein [Vibrio cholerae HC-50A2]
gi|423891433|ref|ZP_17725253.1| exonuclease family protein [Vibrio cholerae HC-62A1]
gi|423926266|ref|ZP_17729870.1| exonuclease family protein [Vibrio cholerae HC-77A1]
gi|424000888|ref|ZP_17743985.1| oligoribonuclease [Vibrio cholerae HC-17A2]
gi|424005046|ref|ZP_17748038.1| oligoribonuclease [Vibrio cholerae HC-37A1]
gi|424022842|ref|ZP_17762513.1| oligoribonuclease [Vibrio cholerae HC-62B1]
gi|424025861|ref|ZP_17765485.1| oligoribonuclease [Vibrio cholerae HC-69A1]
gi|424585240|ref|ZP_18024840.1| oligoribonuclease [Vibrio cholerae CP1030(3)]
gi|424589615|ref|ZP_18029068.1| oligoribonuclease [Vibrio cholerae CP1037(10)]
gi|424593864|ref|ZP_18033210.1| oligoribonuclease [Vibrio cholerae CP1040(13)]
gi|424597795|ref|ZP_18037001.1| oligoribonuclease [Vibrio Cholerae CP1044(17)]
gi|424600561|ref|ZP_18039724.1| oligoribonuclease [Vibrio cholerae CP1047(20)]
gi|424605494|ref|ZP_18044464.1| oligoribonuclease [Vibrio cholerae CP1050(23)]
gi|424609194|ref|ZP_18048059.1| oligoribonuclease [Vibrio cholerae HC-39A1]
gi|424615992|ref|ZP_18054689.1| oligoribonuclease [Vibrio cholerae HC-42A1]
gi|424620767|ref|ZP_18059300.1| oligoribonuclease [Vibrio cholerae HC-47A1]
gi|424643570|ref|ZP_18081330.1| oligoribonuclease [Vibrio cholerae HC-56A2]
gi|424651492|ref|ZP_18089022.1| oligoribonuclease [Vibrio cholerae HC-57A2]
gi|424655454|ref|ZP_18092763.1| oligoribonuclease [Vibrio cholerae HC-81A2]
gi|440712276|ref|ZP_20892899.1| oligoribonuclease [Vibrio cholerae 4260B]
gi|443502388|ref|ZP_21069386.1| oligoribonuclease [Vibrio cholerae HC-64A1]
gi|443506296|ref|ZP_21073098.1| oligoribonuclease [Vibrio cholerae HC-65A1]
gi|443510132|ref|ZP_21076809.1| oligoribonuclease [Vibrio cholerae HC-67A1]
gi|443513967|ref|ZP_21080517.1| oligoribonuclease [Vibrio cholerae HC-68A1]
gi|443517780|ref|ZP_21084208.1| oligoribonuclease [Vibrio cholerae HC-71A1]
gi|443522363|ref|ZP_21088617.1| oligoribonuclease [Vibrio cholerae HC-72A2]
gi|443529294|ref|ZP_21095313.1| oligoribonuclease [Vibrio cholerae HC-7A1]
gi|443534029|ref|ZP_21099956.1| oligoribonuclease [Vibrio cholerae HC-80A1]
gi|443536703|ref|ZP_21102562.1| oligoribonuclease [Vibrio cholerae HC-81A1]
gi|449054427|ref|ZP_21733095.1| 3'-to-5' oligoribonuclease (Orn) [Vibrio cholerae O1 str. Inaba
G4222]
gi|11133789|sp|Q9KV17.1|ORN_VIBCH RecName: Full=Oligoribonuclease
gi|172047716|sp|A5F3M7.1|ORN_VIBC3 RecName: Full=Oligoribonuclease
gi|9654757|gb|AAF93514.1| oligoribonuclease [Vibrio cholerae O1 biovar El Tor str. N16961]
gi|121546555|gb|EAX56757.1| oligoribonuclease [Vibrio cholerae 2740-80]
gi|121627652|gb|EAX60322.1| oligoribonuclease [Vibrio cholerae V52]
gi|146314998|gb|ABQ19537.1| oligoribonuclease [Vibrio cholerae O395]
gi|227008441|gb|ACP04653.1| oligoribonuclease [Vibrio cholerae M66-2]
gi|227012197|gb|ACP08407.1| oligoribonuclease [Vibrio cholerae O395]
gi|229346953|gb|EEO11920.1| oligoribonuclease [Vibrio cholerae RC9]
gi|229354303|gb|EEO19232.1| oligoribonuclease [Vibrio cholerae B33]
gi|229355968|gb|EEO20887.1| oligoribonuclease [Vibrio cholerae BX 330286]
gi|229369032|gb|ACQ59455.1| oligoribonuclease [Vibrio cholerae MJ-1236]
gi|254847356|gb|EET25770.1| oligoribonuclease [Vibrio cholerae MO10]
gi|255735190|gb|EET90592.1| oligoribonuclease [Vibrio cholera CIRS 101]
gi|262024638|gb|EEY43319.1| oligoribonuclease [Vibrio cholerae RC27]
gi|262031207|gb|EEY49826.1| oligoribonuclease [Vibrio cholerae INDRE 91/1]
gi|297539994|gb|EFH76058.1| oligoribonuclease [Vibrio cholerae MAK 757]
gi|340044142|gb|EGR05096.1| oligoribonuclease [Vibrio cholerae HCUF01]
gi|340045549|gb|EGR06491.1| oligoribonuclease [Vibrio cholerae HC-49A2]
gi|341626016|gb|EGS51436.1| oligoribonuclease [Vibrio cholerae HC-70A1]
gi|341626071|gb|EGS51478.1| oligoribonuclease [Vibrio cholerae HC-70A1]
gi|341627548|gb|EGS52850.1| oligoribonuclease [Vibrio cholerae HC-48A1]
gi|341628150|gb|EGS53427.1| oligoribonuclease [Vibrio cholerae HC-40A1]
gi|341641479|gb|EGS66020.1| oligoribonuclease [Vibrio cholerae HFU-02]
gi|341648859|gb|EGS72882.1| oligoribonuclease [Vibrio cholerae HC-38A1]
gi|356422049|gb|EHH75534.1| oligoribonuclease [Vibrio cholerae HC-06A1]
gi|356422858|gb|EHH76326.1| oligoribonuclease [Vibrio cholerae HC-21A1]
gi|356427042|gb|EHH80311.1| oligoribonuclease [Vibrio cholerae HC-19A1]
gi|356433382|gb|EHH86572.1| oligoribonuclease [Vibrio cholerae HC-23A1]
gi|356435229|gb|EHH88386.1| oligoribonuclease [Vibrio cholerae HC-22A1]
gi|356438334|gb|EHH91374.1| oligoribonuclease [Vibrio cholerae HC-28A1]
gi|356443964|gb|EHH96781.1| oligoribonuclease [Vibrio cholerae HC-32A1]
gi|356448216|gb|EHI00996.1| oligoribonuclease [Vibrio cholerae HC-43A1]
gi|356450904|gb|EHI03611.1| oligoribonuclease [Vibrio cholerae HC-33A2]
gi|356456615|gb|EHI09208.1| oligoribonuclease [Vibrio cholerae HC-48B2]
gi|356648132|gb|AET28187.1| oligoribonuclease [Vibrio cholerae O1 str. 2010EL-1786]
gi|378793731|gb|AFC57202.1| oligoribonuclease [Vibrio cholerae IEC224]
gi|395922897|gb|EJH33711.1| oligoribonuclease [Vibrio cholerae CP1032(5)]
gi|395933091|gb|EJH43833.1| oligoribonuclease [Vibrio cholerae CP1042(15)]
gi|395934960|gb|EJH45696.1| oligoribonuclease [Vibrio cholerae CP1046(19)]
gi|395937923|gb|EJH48629.1| oligoribonuclease [Vibrio cholerae CP1048(21)]
gi|395946877|gb|EJH57536.1| oligoribonuclease [Vibrio cholerae HC-20A2]
gi|395948680|gb|EJH59322.1| oligoribonuclease [Vibrio cholerae HC-46A1]
gi|395964327|gb|EJH74557.1| oligoribonuclease [Vibrio cholerae HC-56A2]
gi|395964531|gb|EJH74746.1| oligoribonuclease [Vibrio cholerae HC-57A2]
gi|395967494|gb|EJH77578.1| oligoribonuclease [Vibrio cholerae HC-42A1]
gi|395975944|gb|EJH85412.1| oligoribonuclease [Vibrio cholerae HC-47A1]
gi|395978705|gb|EJH88079.1| oligoribonuclease [Vibrio cholerae CP1030(3)]
gi|395979751|gb|EJH89083.1| oligoribonuclease [Vibrio cholerae CP1047(20)]
gi|408010623|gb|EKG48475.1| oligoribonuclease [Vibrio cholerae HC-39A1]
gi|408037054|gb|EKG73461.1| oligoribonuclease [Vibrio cholerae CP1037(10)]
gi|408037774|gb|EKG74149.1| oligoribonuclease [Vibrio cholerae CP1040(13)]
gi|408045250|gb|EKG81100.1| oligoribonuclease [Vibrio Cholerae CP1044(17)]
gi|408047139|gb|EKG82790.1| oligoribonuclease [Vibrio cholerae CP1050(23)]
gi|408057890|gb|EKG92720.1| oligoribonuclease [Vibrio cholerae HC-81A2]
gi|408612073|gb|EKK85420.1| exonuclease family protein [Vibrio cholerae CP1033(6)]
gi|408628006|gb|EKL00787.1| exonuclease family protein [Vibrio cholerae HC-17A1]
gi|408643563|gb|EKL15284.1| exonuclease family protein [Vibrio cholerae HC-50A2]
gi|408659510|gb|EKL30554.1| exonuclease family protein [Vibrio cholerae HC-77A1]
gi|408660328|gb|EKL31347.1| exonuclease family protein [Vibrio cholerae HC-62A1]
gi|408849780|gb|EKL89787.1| oligoribonuclease [Vibrio cholerae HC-37A1]
gi|408850096|gb|EKL90081.1| oligoribonuclease [Vibrio cholerae HC-17A2]
gi|408875013|gb|EKM14169.1| oligoribonuclease [Vibrio cholerae HC-62B1]
gi|408881670|gb|EKM20534.1| oligoribonuclease [Vibrio cholerae HC-69A1]
gi|439972049|gb|ELP48354.1| oligoribonuclease [Vibrio cholerae 4260B]
gi|443433266|gb|ELS75778.1| oligoribonuclease [Vibrio cholerae HC-64A1]
gi|443437096|gb|ELS83201.1| oligoribonuclease [Vibrio cholerae HC-65A1]
gi|443440929|gb|ELS90605.1| oligoribonuclease [Vibrio cholerae HC-67A1]
gi|443444750|gb|ELS98013.1| oligoribonuclease [Vibrio cholerae HC-68A1]
gi|443448587|gb|ELT05211.1| oligoribonuclease [Vibrio cholerae HC-71A1]
gi|443451645|gb|ELT11895.1| oligoribonuclease [Vibrio cholerae HC-72A2]
gi|443459931|gb|ELT27323.1| oligoribonuclease [Vibrio cholerae HC-7A1]
gi|443462814|gb|ELT33838.1| oligoribonuclease [Vibrio cholerae HC-80A1]
gi|443467705|gb|ELT42360.1| oligoribonuclease [Vibrio cholerae HC-81A1]
gi|448266061|gb|EMB03292.1| 3'-to-5' oligoribonuclease (Orn) [Vibrio cholerae O1 str. Inaba
G4222]
Length = 181
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ E L M+EWC H ASGL RVR S VS EEA + F+ ++V +P+
Sbjct: 46 IAIHQPESELAKMDEWCTTTHTASGLVARVRQSQVSEEEAIDQTLAFLKQWVPEGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|409418451|ref|ZP_11258444.1| oligoribonuclease [Pseudomonas sp. HYS]
Length = 180
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++ VL M+EW H ASGLT RV+ S+VS+ EA+ + F+ +V +P+
Sbjct: 45 IAIHHSDAVLARMDEWNTRTHGASGLTQRVKDSTVSMAEAEAQTIAFLEHWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|327307324|ref|XP_003238353.1| RNA exonuclease Rex2 [Trichophyton rubrum CBS 118892]
gi|326458609|gb|EGD84062.1| RNA exonuclease Rex2 [Trichophyton rubrum CBS 118892]
Length = 188
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKP-KTAPMVG-EYH 94
++VL MN WC++ H SGLT V S + EEA + L ++ +YV +TA + G H
Sbjct: 55 QDVLDRMNAWCIDTHGRSGLTAAVLLSPTTAEEAARGLLAYIKQYVPTQRTALLAGNSVH 114
Query: 95 TSKELLKDSDHFLVFSW 111
+ L + V W
Sbjct: 115 ADRAFLAKPPYAQVLDW 131
>gi|222111865|ref|YP_002554129.1| oligoribonuclease [Acidovorax ebreus TPSY]
gi|221731309|gb|ACM34129.1| Exonuclease RNase T and DNA polymerase III [Acidovorax ebreus TPSY]
Length = 192
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/69 (33%), Positives = 39/69 (56%), Gaps = 1/69 (1%)
Query: 23 LQTQGTCKCGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV 82
L+ +G ++ + VL M+ W H SGL D+VRAS+++ +A++ L F+++YV
Sbjct: 50 LRVEGPV-FAIHQADAVLDGMDAWNKGTHGRSGLIDKVRASTITEADAERELLAFLSRYV 108
Query: 83 KPKTAPMVG 91
PM G
Sbjct: 109 PKGVVPMCG 117
>gi|153831492|ref|ZP_01984159.1| oligoribonuclease [Vibrio cholerae 623-39]
gi|148873026|gb|EDL71161.1| oligoribonuclease [Vibrio cholerae 623-39]
Length = 181
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ E L M+EWC H ASGL RVR S VS EEA + F+ ++V +P+
Sbjct: 46 IAIHQPESELAKMDEWCTTTHTASGLVARVRQSKVSEEEAIDQTLAFLKQWVPEGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|359450011|ref|ZP_09239480.1| oligoribonuclease [Pseudoalteromonas sp. BSi20480]
gi|392536588|ref|ZP_10283725.1| oligoribonuclease [Pseudoalteromonas marina mano4]
gi|358044178|dbj|GAA75729.1| oligoribonuclease [Pseudoalteromonas sp. BSi20480]
Length = 181
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+EWC H SGLT R +AS+ E A + +F+ ++V +PM G
Sbjct: 47 AIHQSDELLNGMDEWCTTQHGKSGLTARCKASTFDEEYAVAQTLEFLKQWVPAGASPMCG 106
>gi|319639353|ref|ZP_07994104.1| oligoribonuclease [Neisseria mucosa C102]
gi|317399537|gb|EFV80207.1| oligoribonuclease [Neisseria mucosa C102]
Length = 185
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 38/59 (64%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L +M+EW H +GLT RVR S+++ E ++ L F++ ++ K+ PM G
Sbjct: 48 IHQSDELLDSMDEWNTATHGRTGLTQRVRESTLTEAEVEQNLLDFMSAWIPEKSTPMCG 106
>gi|153217654|ref|ZP_01951335.1| oligoribonuclease [Vibrio cholerae 1587]
gi|229519881|ref|ZP_04409314.1| oligoribonuclease [Vibrio cholerae TM 11079-80]
gi|297582247|ref|ZP_06944163.1| oligoribonuclease [Vibrio cholerae RC385]
gi|419828916|ref|ZP_14352406.1| exonuclease family protein [Vibrio cholerae HC-1A2]
gi|419831698|ref|ZP_14355166.1| exonuclease family protein [Vibrio cholerae HC-61A2]
gi|419835287|ref|ZP_14358734.1| oligoribonuclease [Vibrio cholerae HC-46B1]
gi|421341898|ref|ZP_15792306.1| oligoribonuclease [Vibrio cholerae HC-43B1]
gi|421350200|ref|ZP_15800567.1| oligoribonuclease [Vibrio cholerae HE-25]
gi|421353172|ref|ZP_15803507.1| oligoribonuclease [Vibrio cholerae HE-45]
gi|422305761|ref|ZP_16392951.1| exonuclease family protein [Vibrio cholerae CP1035(8)]
gi|423733648|ref|ZP_17706867.1| exonuclease family protein [Vibrio cholerae HC-41B1]
gi|423814285|ref|ZP_17715027.1| exonuclease family protein [Vibrio cholerae HC-55C2]
gi|423847511|ref|ZP_17718827.1| exonuclease family protein [Vibrio cholerae HC-59A1]
gi|423996496|ref|ZP_17739767.1| oligoribonuclease [Vibrio cholerae HC-02C1]
gi|424007957|ref|ZP_17750909.1| oligoribonuclease [Vibrio cholerae HC-44C1]
gi|424015196|ref|ZP_17755048.1| oligoribonuclease [Vibrio cholerae HC-55B2]
gi|424018309|ref|ZP_17758116.1| oligoribonuclease [Vibrio cholerae HC-59B1]
gi|424623700|ref|ZP_18062182.1| oligoribonuclease [Vibrio cholerae HC-50A1]
gi|424628259|ref|ZP_18066572.1| oligoribonuclease [Vibrio cholerae HC-51A1]
gi|424632213|ref|ZP_18070335.1| oligoribonuclease [Vibrio cholerae HC-52A1]
gi|424635300|ref|ZP_18073326.1| oligoribonuclease [Vibrio cholerae HC-55A1]
gi|424639092|ref|ZP_18076994.1| oligoribonuclease [Vibrio cholerae HC-56A1]
gi|424647375|ref|ZP_18085057.1| oligoribonuclease [Vibrio cholerae HC-57A1]
gi|443526229|ref|ZP_21092320.1| oligoribonuclease [Vibrio cholerae HC-78A1]
gi|124113399|gb|EAY32219.1| oligoribonuclease [Vibrio cholerae 1587]
gi|229343122|gb|EEO08107.1| oligoribonuclease [Vibrio cholerae TM 11079-80]
gi|297533548|gb|EFH72393.1| oligoribonuclease [Vibrio cholerae RC385]
gi|395946621|gb|EJH57282.1| oligoribonuclease [Vibrio cholerae HC-43B1]
gi|395954922|gb|EJH65528.1| oligoribonuclease [Vibrio cholerae HE-25]
gi|395955294|gb|EJH65896.1| oligoribonuclease [Vibrio cholerae HE-45]
gi|408016571|gb|EKG54114.1| oligoribonuclease [Vibrio cholerae HC-50A1]
gi|408021969|gb|EKG59199.1| oligoribonuclease [Vibrio cholerae HC-52A1]
gi|408027943|gb|EKG64880.1| oligoribonuclease [Vibrio cholerae HC-56A1]
gi|408027995|gb|EKG64925.1| oligoribonuclease [Vibrio cholerae HC-55A1]
gi|408037703|gb|EKG74085.1| oligoribonuclease [Vibrio cholerae HC-57A1]
gi|408059513|gb|EKG94271.1| oligoribonuclease [Vibrio cholerae HC-51A1]
gi|408622513|gb|EKK95496.1| exonuclease family protein [Vibrio cholerae HC-1A2]
gi|408628137|gb|EKL00906.1| exonuclease family protein [Vibrio cholerae CP1035(8)]
gi|408632019|gb|EKL04525.1| exonuclease family protein [Vibrio cholerae HC-41B1]
gi|408637016|gb|EKL09120.1| exonuclease family protein [Vibrio cholerae HC-55C2]
gi|408645520|gb|EKL17167.1| exonuclease family protein [Vibrio cholerae HC-59A1]
gi|408652347|gb|EKL23567.1| exonuclease family protein [Vibrio cholerae HC-61A2]
gi|408855090|gb|EKL94823.1| oligoribonuclease [Vibrio cholerae HC-02C1]
gi|408859190|gb|EKL98854.1| oligoribonuclease [Vibrio cholerae HC-46B1]
gi|408862282|gb|EKM01812.1| oligoribonuclease [Vibrio cholerae HC-55B2]
gi|408866615|gb|EKM05993.1| oligoribonuclease [Vibrio cholerae HC-44C1]
gi|408871074|gb|EKM10334.1| oligoribonuclease [Vibrio cholerae HC-59B1]
gi|443455438|gb|ELT19214.1| oligoribonuclease [Vibrio cholerae HC-78A1]
Length = 181
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ E L M+EWC H ASGL RVR S VS EEA + F+ ++V +P+
Sbjct: 46 IAIHQPESELAKMDEWCTTTHTASGLVARVRQSKVSEEEAIDQTLAFLKQWVPEGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|222628576|gb|EEE60708.1| hypothetical protein OsJ_14203 [Oryza sativa Japonica Group]
Length = 129
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/49 (42%), Positives = 32/49 (65%)
Query: 43 MNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
MNEWC HH+ASGL ++V S +S +A+K++ F+ KY+ T + G
Sbjct: 1 MNEWCKVHHSASGLKEKVLQSDISENDAEKQVLDFIRKYIGSATPLIAG 49
>gi|119469142|ref|ZP_01612126.1| oligoribonuclease [Alteromonadales bacterium TW-7]
gi|119447394|gb|EAW28662.1| oligoribonuclease [Alteromonadales bacterium TW-7]
Length = 181
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+EWC H SGLT R +AS+ E A + +F+ ++V +PM G
Sbjct: 47 AIHQSDELLNGMDEWCTTQHGKSGLTARCKASAFDEEYAVAQTLEFLKQWVPAGASPMCG 106
>gi|358637983|dbj|BAL25280.1| oligoribonuclease [Azoarcus sp. KH32C]
Length = 183
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 33/55 (60%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ VL M++W H SGLT+RVR S + E + R+ F+ +YV +T+PM G
Sbjct: 52 DAVLDGMDDWNKNTHGKSGLTERVRTSILGEAEVEARMLAFLQEYVPSRTSPMCG 106
>gi|261193992|ref|XP_002623401.1| RNA exonuclease Rex2 [Ajellomyces dermatitidis SLH14081]
gi|239588415|gb|EEQ71058.1| RNA exonuclease Rex2 [Ajellomyces dermatitidis SLH14081]
gi|239607020|gb|EEQ84007.1| RNA exonuclease Rex2 [Ajellomyces dermatitidis ER-3]
gi|327354510|gb|EGE83367.1| RNA exonuclease Rex2 [Ajellomyces dermatitidis ATCC 18188]
Length = 173
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 41/81 (50%), Gaps = 2/81 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG- 91
+++ + VL NMN+WC++ H SGLT V AS + A + L ++ K+V K ++
Sbjct: 35 IHHPKSVLDNMNDWCIDTHGRSGLTAAVAASKTTPTAAAEGLLAYIKKHVPQKRTGLLAG 94
Query: 92 -EYHTSKELLKDSDHFLVFSW 111
H K L + +V W
Sbjct: 95 NSVHADKAFLACEPYAMVLEW 115
>gi|237785970|ref|YP_002906675.1| oligoribonuclease [Corynebacterium kroppenstedtii DSM 44385]
gi|237758882|gb|ACR18132.1| putative oligoribonuclease [Corynebacterium kroppenstedtii DSM
44385]
Length = 222
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++ L M+++ + H +GLTD +R S+VS+ EA+ + +V K+V P+TAP+ G
Sbjct: 65 IHATDDELAKMDDFVTQMHTKNGLTDEIRKSTVSVGEAENEVLDYVKKWVNAPRTAPLAG 124
>gi|217970407|ref|YP_002355641.1| oligoribonuclease [Thauera sp. MZ1T]
gi|217507734|gb|ACK54745.1| Exonuclease RNase T and DNA polymerase III [Thauera sp. MZ1T]
Length = 182
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ + VL M+EW H SGLT RVRAS++S +A+ ++ F+ +V +T+PM
Sbjct: 46 IAVHQPDSVLDGMDEWNRNTHGKSGLTARVRASTMSEADAEAQVLAFLRAHVPARTSPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|381395929|ref|ZP_09921623.1| oligoribonuclease [Glaciecola punicea DSM 14233 = ACAM 611]
gi|379328494|dbj|GAB56756.1| oligoribonuclease [Glaciecola punicea DSM 14233 = ACAM 611]
Length = 181
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + +VL NM+ WCV H +GLT R + S V + +A + F+ YV +P+ G
Sbjct: 47 AIHQSADVLDNMDPWCVNIHGGTGLTQRCKESEVDVTQASQLTIDFLKNYVPAGKSPLCG 106
>gi|422916076|ref|ZP_16950422.1| oligoribonuclease [Vibrio cholerae HC-02A1]
gi|423878680|ref|ZP_17722420.1| exonuclease family protein [Vibrio cholerae HC-60A1]
gi|341641197|gb|EGS65755.1| oligoribonuclease [Vibrio cholerae HC-02A1]
gi|408644418|gb|EKL16108.1| exonuclease family protein [Vibrio cholerae HC-60A1]
Length = 167
Score = 48.5 bits (114), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ E L M+EWC H ASGL RVR S VS EEA + F+ ++V +P+
Sbjct: 32 IAIHQPESELAKMDEWCTTTHTASGLVARVRQSKVSEEEAIDQTLAFLKQWVPEGKSPIC 91
Query: 91 G 91
G
Sbjct: 92 G 92
>gi|90416474|ref|ZP_01224405.1| oligoribonuclease [gamma proteobacterium HTCC2207]
gi|90331673|gb|EAS46901.1| oligoribonuclease [gamma proteobacterium HTCC2207]
Length = 188
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E++ M+EW H SGLT+RVR S V+ EA+ +F+ ++V ++PM
Sbjct: 53 IAVHQSDELIDGMDEWNTRQHGGSGLTERVRQSLVTEAEAELATIEFLRQWVPAGSSPMC 112
Query: 91 G 91
G
Sbjct: 113 G 113
>gi|354614416|ref|ZP_09032282.1| Oligoribonuclease [Saccharomonospora paurometabolica YIM 90007]
gi|353221243|gb|EHB85615.1| Oligoribonuclease [Saccharomonospora paurometabolica YIM 90007]
Length = 202
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ +++ L NM + H SGLT+ VRAS++++ EA+++ ++ +YV P+TAP+ G
Sbjct: 45 IHADDDALANMPDVVRTMHARSGLTEEVRASTMTVAEAERQALDYIRRYVPDPRTAPLAG 104
>gi|332290039|ref|YP_004420891.1| oligoribonuclease [Gallibacterium anatis UMN179]
gi|330432935|gb|AEC17994.1| oligoribonuclease [Gallibacterium anatis UMN179]
Length = 182
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 36/56 (64%)
Query: 36 NEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++++L MNEWC + H+A+GL +RVR S ++ A+ + F+ K+V +P+ G
Sbjct: 51 DDKILAGMNEWCQKTHSANGLIERVRQSKLTERAAELQTLDFLKKWVPKGVSPICG 106
>gi|421319126|ref|ZP_15769687.1| oligoribonuclease [Vibrio cholerae CP1038(11)]
gi|421323162|ref|ZP_15773693.1| oligoribonuclease [Vibrio cholerae CP1041(14)]
gi|424612112|ref|ZP_18050925.1| oligoribonuclease [Vibrio cholerae HC-41A1]
gi|395924183|gb|EJH34991.1| oligoribonuclease [Vibrio cholerae CP1041(14)]
gi|395925975|gb|EJH36767.1| oligoribonuclease [Vibrio cholerae CP1038(11)]
gi|408017406|gb|EKG54912.1| oligoribonuclease [Vibrio cholerae HC-41A1]
Length = 167
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/61 (39%), Positives = 33/61 (54%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ E L M+EWC H ASGL RVR S VS EEA + F+ ++V +P+
Sbjct: 32 IAIHQPESELAKMDEWCTTTHTASGLVARVRQSQVSEEEAIDQTLAFLKQWVPEGKSPIC 91
Query: 91 G 91
G
Sbjct: 92 G 92
>gi|331005310|ref|ZP_08328699.1| Oligoribonuclease [gamma proteobacterium IMCC1989]
gi|330420886|gb|EGG95163.1| Oligoribonuclease [gamma proteobacterium IMCC1989]
Length = 180
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT+RVR S++S +A+++ F+ ++V +PM
Sbjct: 45 LAIHQSDERLAAMDEWNTNQHGKSGLTERVRNSNISASDAEQQTIDFLKQWVPAGKSPMS 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|212555139|gb|ACJ27593.1| Exonuclease [Shewanella piezotolerans WP3]
Length = 181
Score = 48.5 bits (114), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/67 (35%), Positives = 39/67 (58%), Gaps = 1/67 (1%)
Query: 25 TQGTCKCGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKP 84
QG ++ +E L M++W +HH SGL +RV+AS S E+A + +F+++YV
Sbjct: 41 AQGPV-IAIHQTDEQLALMDDWNQKHHGESGLVERVKASQFSEEDAIAQTIEFLSQYVPA 99
Query: 85 KTAPMVG 91
+PM G
Sbjct: 100 GASPMCG 106
>gi|380493772|emb|CCF33636.1| exonuclease [Colletotrichum higginsianum]
Length = 211
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 40/72 (55%), Gaps = 2/72 (2%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPM 89
C ++ EE + M++WC H SGLT V S+ + E+A + L ++ K+V KPKTA +
Sbjct: 44 CVVHQTEERMAQMDDWCTRTHRDSGLTAAVIQSTTTAEQAAEELLAYIRKHVPKPKTALL 103
Query: 90 VG-EYHTSKELL 100
G H + L
Sbjct: 104 AGNSVHADRSFL 115
>gi|375102049|ref|ZP_09748312.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
cyanea NA-134]
gi|374662781|gb|EHR62659.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
cyanea NA-134]
Length = 202
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++E L NM + + H SGLT+ VR S++++EEA++R +V ++V P+TAP+ G
Sbjct: 45 IHADDEALANMPDVVRDMHARSGLTEEVRRSTMTLEEAEQRALAYVREHVPDPQTAPLAG 104
>gi|302865700|ref|YP_003834337.1| exonuclease RNase T and DNA polymerase III [Micromonospora
aurantiaca ATCC 27029]
gi|302568559|gb|ADL44761.1| Exonuclease RNase T and DNA polymerase III [Micromonospora
aurantiaca ATCC 27029]
Length = 196
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++E L M E H SGLT+ VR S+V++ EA+ + +V YVK P+TAP+ G
Sbjct: 45 IHADDEALDGMPEIVRTMHAKSGLTEEVRLSTVTLAEAEDMVLDYVTSYVKDPRTAPLCG 104
>gi|336309795|ref|ZP_08564772.1| 3'-to-5' oligoribonuclease (orn) [Shewanella sp. HN-41]
gi|335866789|gb|EGM71752.1| 3'-to-5' oligoribonuclease (orn) [Shewanella sp. HN-41]
Length = 181
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++EVL M++W +HH ASGL +RVRAS + +A + F+ +YV +PM
Sbjct: 46 IAIHQSDEVLAVMDDWNQKHHGASGLIERVRASQDNEAQAVAKTIAFLEQYVPKGASPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|298369765|ref|ZP_06981082.1| oligoribonuclease [Neisseria sp. oral taxon 014 str. F0314]
gi|349608930|ref|ZP_08888343.1| oligoribonuclease [Neisseria sp. GT4A_CT1]
gi|419798635|ref|ZP_14324036.1| oligoribonuclease [Neisseria sicca VK64]
gi|298282322|gb|EFI23810.1| oligoribonuclease [Neisseria sp. oral taxon 014 str. F0314]
gi|348613712|gb|EGY63289.1| oligoribonuclease [Neisseria sp. GT4A_CT1]
gi|385694216|gb|EIG24831.1| oligoribonuclease [Neisseria sicca VK64]
Length = 185
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+ W H +GLT RVR S ++ E +++L F+A+++ K PM G
Sbjct: 48 VHQSDELLDGMDAWNTATHGRTGLTQRVRESRLTEAEVEQKLLDFIAQWIPEKATPMCG 106
>gi|409397019|ref|ZP_11247962.1| oligoribonuclease [Pseudomonas sp. Chol1]
gi|409118521|gb|EKM94920.1| oligoribonuclease [Pseudomonas sp. Chol1]
Length = 180
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++EVL M+EW H SGLT RVR S + EA+ + F+ ++V +P+
Sbjct: 45 IAVHQSDEVLARMDEWNTRQHGGSGLTQRVRESRIGTAEAEAQTLAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|89900205|ref|YP_522676.1| oligoribonuclease [Rhodoferax ferrireducens T118]
gi|89344942|gb|ABD69145.1| Exonuclease [Rhodoferax ferrireducens T118]
Length = 169
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 40/59 (67%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M++W H +GL D+V+AS++ +A+ ++ +F+++YV K APM G
Sbjct: 34 IHQSDELLDKMDQWNKGTHGKTGLIDKVKASTLLEAQAEAQIIEFLSQYVPKKGAPMCG 92
>gi|387130603|ref|YP_006293493.1| 3'-to-5' oligoribonuclease [Methylophaga sp. JAM7]
gi|386271892|gb|AFJ02806.1| 3'-to-5' oligoribonuclease (orn) [Methylophaga sp. JAM7]
Length = 183
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M+EW H +SGLT+RVR+S+ + +A+ F+ +YV T+PM G
Sbjct: 55 LDGMDEWNTRQHGSSGLTERVRSSTYTEAQAEAETLAFLKQYVPANTSPMCG 106
>gi|444429159|ref|ZP_21224400.1| oligoribonuclease [Vibrio campbellii CAIM 519 = NBRC 15631]
gi|444237624|gb|ELU49310.1| oligoribonuclease [Vibrio campbellii CAIM 519 = NBRC 15631]
Length = 181
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
EE L M++WC H +SGL +RVR S VS ++A + +F+ K+V +P+ G
Sbjct: 52 EEELAKMDDWCTNTHTSSGLVERVRNSDVSEQDAVAQTIEFLDKWVPKGVSPICG 106
>gi|357590717|ref|ZP_09129383.1| oligoribonuclease [Corynebacterium nuruki S6-4]
Length = 209
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ +E L M+E V+ H +SGLTD +RASSV++ EA++++ ++ ++V+ AP+ G
Sbjct: 52 IHASEAELAEMDEVVVKMHGSSGLTDEIRASSVTVAEAERQVVDYIKRFVEVAGAAPLCG 111
>gi|344257562|gb|EGW13666.1| Oligoribonuclease, mitochondrial [Cricetulus griseus]
Length = 199
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 36/65 (55%), Gaps = 1/65 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+E+L +M++WC HH SGLT V+ S+ ++++A+ FV P P+ G H
Sbjct: 49 DELLDSMSDWCKGHHGKSGLTKAVKESTTTLQQAEYEFLSFVRLQTPPGLCPLAGNSVHA 108
Query: 96 SKELL 100
K+ L
Sbjct: 109 DKKFL 113
>gi|343961877|dbj|BAK62526.1| RNA binding motif protein 7 [Pan troglodytes]
Length = 145
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 34/59 (57%), Gaps = 1/59 (1%)
Query: 43 MNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHTSKELL 100
M++WC EHH SGLT V+ S++++++A+ FV + P P+ G H K+ L
Sbjct: 1 MSDWCKEHHGKSGLTKAVKESTITLQQAEYEFLSFVRQQTPPGLCPLAGNSVHEDKKFL 59
>gi|91077136|ref|XP_971386.1| PREDICTED: similar to rCG37751 [Tribolium castaneum]
gi|270001717|gb|EEZ98164.1| hypothetical protein TcasGA2_TC000591 [Tribolium castaneum]
Length = 1730
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/26 (84%), Positives = 22/26 (84%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PSNTALSS EQVK YL T GTCKCGL
Sbjct: 188 PSNTALSSPEQVKEYLLTSGTCKCGL 213
>gi|315502266|ref|YP_004081153.1| exonuclease rnase t and DNA polymerase III [Micromonospora sp. L5]
gi|315408885|gb|ADU07002.1| Exonuclease RNase T and DNA polymerase III [Micromonospora sp. L5]
Length = 196
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++E L M E H SGLT+ VR S+V++ EA+ + +V YVK P+TAP+ G
Sbjct: 45 IHADDEALDGMPEIVRTMHAKSGLTEEVRRSTVTLAEAEDMVLDYVTSYVKDPRTAPLCG 104
>gi|307204783|gb|EFN83341.1| Oligoribonuclease, mitochondrial [Harpegnathos saltator]
Length = 168
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 41/70 (58%), Gaps = 1/70 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG- 91
+Y E+L+NM +WC H SGL ++S ++++EA++ + +++ K++ K P+ G
Sbjct: 34 IYQPNEILENMTDWCKVQHKKSGLITACQSSKITLKEAEEIMLKYLKKHISYKVCPLAGN 93
Query: 92 EYHTSKELLK 101
HT L+
Sbjct: 94 SIHTDYMFLR 103
>gi|254823127|ref|ZP_05228128.1| oligoribonuclease [Mycobacterium intracellulare ATCC 13950]
gi|379746471|ref|YP_005337292.1| oligoribonuclease [Mycobacterium intracellulare ATCC 13950]
gi|379753742|ref|YP_005342414.1| oligoribonuclease [Mycobacterium intracellulare MOTT-02]
gi|379760933|ref|YP_005347330.1| oligoribonuclease [Mycobacterium intracellulare MOTT-64]
gi|387874867|ref|YP_006305171.1| oligoribonuclease [Mycobacterium sp. MOTT36Y]
gi|406029868|ref|YP_006728759.1| oligoribonuclease [Mycobacterium indicus pranii MTCC 9506]
gi|443304795|ref|ZP_21034583.1| oligoribonuclease [Mycobacterium sp. H4Y]
gi|378798835|gb|AFC42971.1| oligoribonuclease [Mycobacterium intracellulare ATCC 13950]
gi|378803958|gb|AFC48093.1| oligoribonuclease [Mycobacterium intracellulare MOTT-02]
gi|378808875|gb|AFC53009.1| oligoribonuclease [Mycobacterium intracellulare MOTT-64]
gi|386788325|gb|AFJ34444.1| oligoribonuclease [Mycobacterium sp. MOTT36Y]
gi|405128415|gb|AFS13670.1| Oligoribonuclease [Mycobacterium indicus pranii MTCC 9506]
gi|442766359|gb|ELR84353.1| oligoribonuclease [Mycobacterium sp. H4Y]
Length = 215
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++ L M + E H+ SGL D VRAS+V + A+ + ++ ++VK PKTAP+ G
Sbjct: 45 IHADDAALSAMGDVVTEMHSRSGLIDEVRASAVDLATAEAMVLDYIGQHVKQPKTAPLAG 104
>gi|424658235|ref|ZP_18095495.1| oligoribonuclease [Vibrio cholerae HE-16]
gi|408055678|gb|EKG90595.1| oligoribonuclease [Vibrio cholerae HE-16]
Length = 181
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 33/61 (54%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+Y E L M+EWC H ASGL RVR S V +EA ++ F+ ++V +P+
Sbjct: 46 IAIYQPESELAKMDEWCTTTHTASGLVARVRQSQVREDEAIEQTLAFLKQWVPEGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|409405236|ref|ZP_11253698.1| oligoribonuclease [Herbaspirillum sp. GW103]
gi|386433785|gb|EIJ46610.1| oligoribonuclease [Herbaspirillum sp. GW103]
Length = 189
Score = 48.1 bits (113), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+ W H SGL DRV+AS+V+ +A++++ F+ +YV +PM G
Sbjct: 55 AIHQSDELLDGMDAWNKGTHGRSGLIDRVKASTVTEADAEQQIIAFLKQYVPAGKSPMCG 114
>gi|395744516|ref|XP_002823479.2| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein
6 [Pongo abelii]
Length = 1044
Score = 48.1 bits (113), Expect = 7e-04, Method: Composition-based stats.
Identities = 20/31 (64%), Positives = 24/31 (77%)
Query: 3 NIGNRPSNTALSSMEQVKAYLQTQGTCKCGL 33
N G RPS T LSS+EQ ++YL + GTCKCGL
Sbjct: 53 NHGPRPSGTELSSLEQTRSYLLSDGTCKCGL 83
>gi|410612135|ref|ZP_11323218.1| oligoribonuclease [Glaciecola psychrophila 170]
gi|410168326|dbj|GAC37107.1| oligoribonuclease [Glaciecola psychrophila 170]
Length = 181
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+Y +EVL M++WC + H SGLT R R S V+ ++A ++ F+ +V +P+ G
Sbjct: 47 AIYQPDEVLNGMDQWCTDTHGKSGLTKRCRDSDVNEQQAVEQTILFLEDFVPKGISPLCG 106
>gi|258620689|ref|ZP_05715724.1| oligoribonuclease [Vibrio mimicus VM573]
gi|424811013|ref|ZP_18236344.1| oligoribonuclease [Vibrio mimicus SX-4]
gi|258586887|gb|EEW11601.1| oligoribonuclease [Vibrio mimicus VM573]
gi|342321895|gb|EGU17692.1| oligoribonuclease [Vibrio mimicus SX-4]
Length = 181
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ E L M+EWC H ASGL RVR S VS EEA + F+ ++V +P+ G
Sbjct: 48 IHQPESELAKMDEWCTTTHTASGLVARVRQSQVSEEEAIDQTLAFLKQWVPEGKSPICG 106
>gi|126172800|ref|YP_001048949.1| oligoribonuclease [Shewanella baltica OS155]
gi|153002280|ref|YP_001367961.1| oligoribonuclease [Shewanella baltica OS185]
gi|160877004|ref|YP_001556320.1| oligoribonuclease [Shewanella baltica OS195]
gi|373948044|ref|ZP_09608005.1| Oligoribonuclease [Shewanella baltica OS183]
gi|378710218|ref|YP_005275112.1| Exonuclease RNase T and DNA polymerase III [Shewanella baltica
OS678]
gi|386326110|ref|YP_006022227.1| oligoribonuclease [Shewanella baltica BA175]
gi|386339571|ref|YP_006035937.1| oligoribonuclease [Shewanella baltica OS117]
gi|418022336|ref|ZP_12661323.1| Oligoribonuclease [Shewanella baltica OS625]
gi|166216585|sp|A3D017.1|ORN_SHEB5 RecName: Full=Oligoribonuclease
gi|166216586|sp|A6WSV9.1|ORN_SHEB8 RecName: Full=Oligoribonuclease
gi|125996005|gb|ABN60080.1| Exonuclease, RNase T and DNA polymerase III [Shewanella baltica
OS155]
gi|151366898|gb|ABS09898.1| Exonuclease RNase T and DNA polymerase III [Shewanella baltica
OS185]
gi|160862526|gb|ABX51060.1| Exonuclease RNase T and DNA polymerase III [Shewanella baltica
OS195]
gi|315269207|gb|ADT96060.1| Exonuclease RNase T and DNA polymerase III [Shewanella baltica
OS678]
gi|333820255|gb|AEG12921.1| Oligoribonuclease [Shewanella baltica BA175]
gi|334861972|gb|AEH12443.1| Oligoribonuclease [Shewanella baltica OS117]
gi|353538561|gb|EHC08116.1| Oligoribonuclease [Shewanella baltica OS625]
gi|373884644|gb|EHQ13536.1| Oligoribonuclease [Shewanella baltica OS183]
Length = 181
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +++VL M++W +HH SGL DRVRAS + +A + F+ +YV +PM
Sbjct: 46 IAIHQSDDVLAAMDDWNQKHHGESGLIDRVRASQETEAQAVAKTIAFLEQYVPKGASPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|288940627|ref|YP_003442867.1| Exonuclease RNase T and DNA polymerase III [Allochromatium vinosum
DSM 180]
gi|288895999|gb|ADC61835.1| Exonuclease RNase T and DNA polymerase III [Allochromatium vinosum
DSM 180]
Length = 187
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E +L +++W EHH ASGL DRVR S+ EA+ F+A+YV +P+ G
Sbjct: 52 AIHQDEAILAGLDDWNREHHGASGLLDRVRVSAQREAEAEAATLAFLAEYVPAGASPLCG 111
>gi|383825329|ref|ZP_09980479.1| oligoribonuclease [Mycobacterium xenopi RIVM700367]
gi|383335059|gb|EID13491.1| oligoribonuclease [Mycobacterium xenopi RIVM700367]
Length = 215
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++ L +M E + H SGL D VRAS++ + A+ + ++ +YVK PKTAP+ G
Sbjct: 45 IHADDAALSSMIEVVTDMHARSGLVDEVRASTIDVATAETMVLDYIREYVKQPKTAPLAG 104
>gi|406915333|gb|EKD54428.1| hypothetical protein ACD_60C00087G0040 [uncultured bacterium]
Length = 184
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 38 EVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
E+LQ M+ W +HHNASGL RV+AS + EA+ F+ +++ +PM G
Sbjct: 52 ELLQGMDSWNTKHHNASGLVARVKASHTTEIEAENATLDFLRQHIPAGKSPMCG 105
>gi|217974867|ref|YP_002359618.1| oligoribonuclease [Shewanella baltica OS223]
gi|217500002|gb|ACK48195.1| Exonuclease RNase T and DNA polymerase III [Shewanella baltica
OS223]
Length = 181
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +++VL M++W +HH SGL DRVRAS + +A + F+ +YV +PM
Sbjct: 46 IAIHQSDDVLAAMDDWNQKHHGESGLIDRVRASQETEAQAVAKTIAFLEQYVPKGASPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|358450310|ref|ZP_09160775.1| oligoribonuclease [Marinobacter manganoxydans MnI7-9]
gi|357225697|gb|EHJ04197.1| oligoribonuclease [Marinobacter manganoxydans MnI7-9]
Length = 180
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ + L +M+EWC H SGLT RV+ S +S +A+++ +F+ K+V+ +P+
Sbjct: 45 IAVHQPQSFLDSMDEWCTRTHGESGLTKRVQESDISESQAEQQTIEFLKKHVEKGQSPLC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|335425145|ref|ZP_08554133.1| oligoribonuclease [Salinisphaera shabanensis E1L3A]
gi|334886581|gb|EGM24938.1| oligoribonuclease [Salinisphaera shabanensis E1L3A]
Length = 181
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ +L M+ W HN SGL RVR SS+ +A + F+A+YV +PM G
Sbjct: 47 AIHQDDALLDGMDAWNTRQHNQSGLVKRVRDSSIDEAQAQRETLAFLAEYVPEGASPMCG 106
>gi|296170420|ref|ZP_06852008.1| oligoribonuclease [Mycobacterium parascrofulaceum ATCC BAA-614]
gi|295894891|gb|EFG74612.1| oligoribonuclease [Mycobacterium parascrofulaceum ATCC BAA-614]
Length = 215
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++ L +M + E H+ SGL D VRAS+V + A+ + +V ++VK PKTAP+ G
Sbjct: 45 IHADDAALSSMIDVVTEMHSRSGLIDEVRASTVDLATAEAMVLDYVGQHVKQPKTAPLAG 104
>gi|385332247|ref|YP_005886198.1| oligoribonuclease [Marinobacter adhaerens HP15]
gi|311695397|gb|ADP98270.1| oligoribonuclease [Marinobacter adhaerens HP15]
Length = 180
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ + L +M+EWC H SGLT RV+ S +S +A+++ +F+ K+V+ +P+
Sbjct: 45 IAVHQPQSFLDSMDEWCTRTHGESGLTKRVQESDISESQAEQQTIEFLKKHVEKGQSPLC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|195449894|ref|XP_002072273.1| GK22765 [Drosophila willistoni]
gi|194168358|gb|EDW83259.1| GK22765 [Drosophila willistoni]
Length = 190
Score = 48.1 bits (113), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 34/55 (61%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+EV + MNEWC++ H ASGL D + S+V+ E A+ + ++ + + KT + G
Sbjct: 61 QEVYEQMNEWCIKQHYASGLVDSCKKSTVTPEAAEDLILTYLKQNIPEKTCVLAG 115
>gi|340709024|ref|XP_003393116.1| PREDICTED: probable oligoribonuclease-like [Bombus terrestris]
Length = 186
Score = 47.8 bits (112), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 31/53 (58%)
Query: 39 VLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
VL+NMNEWC H +GL ++ + S S+ + ++ L + Y+ K+ P+ G
Sbjct: 55 VLENMNEWCTNWHIKTGLIEKSKCSKFSLTDVEQMLLNLLKNYIPSKSCPLAG 107
>gi|421541160|ref|ZP_15987290.1| oligoribonuclease [Neisseria meningitidis 93004]
gi|421555582|ref|ZP_16001509.1| oligoribonuclease [Neisseria meningitidis 98008]
gi|402315953|gb|EJU51507.1| oligoribonuclease [Neisseria meningitidis 93004]
gi|402329042|gb|EJU64404.1| oligoribonuclease [Neisseria meningitidis 98008]
Length = 187
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L NM+EW H +GLT RVR S + E +++L F++++V + PM G
Sbjct: 46 AIHQSDELLDNMDEWNTATHGRTGLTQRVRESLHTEAEVEQKLLDFMSEWVPGRATPMCG 105
>gi|156972480|ref|YP_001443387.1| oligoribonuclease [Vibrio harveyi ATCC BAA-1116]
gi|166216591|sp|A7MZ48.1|ORN_VIBHB RecName: Full=Oligoribonuclease
gi|156524074|gb|ABU69160.1| hypothetical protein VIBHAR_00112 [Vibrio harveyi ATCC BAA-1116]
Length = 181
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
EE L M++WC H +SGL +RVR S VS ++A + +F+ K+V +P+ G
Sbjct: 52 EEELVKMDDWCTNTHTSSGLVERVRNSDVSEQDAVAQTIEFLEKWVPKGVSPICG 106
>gi|407792451|ref|ZP_11139507.1| oligoribonuclease [Gallaecimonas xiamenensis 3-C-1]
gi|407197124|gb|EKE67209.1| oligoribonuclease [Gallaecimonas xiamenensis 3-C-1]
Length = 182
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ +L M+EWC H +GL RV+AS+VS +A+++ F+A++V +P+ G
Sbjct: 45 AVHQSDALLDAMDEWCTRTHTNNGLIARVKASNVSEADAERQTLDFLARWVDKGASPICG 104
>gi|431925703|ref|YP_007238737.1| oligoribonuclease [Pseudomonas stutzeri RCH2]
gi|431823990|gb|AGA85107.1| oligoribonuclease (3'->5' exoribonuclease) [Pseudomonas stutzeri
RCH2]
Length = 180
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT RVR S +S EA++ F+ ++V +P+
Sbjct: 45 IAVHQSDETLARMDEWNTRQHGGSGLTQRVRESKISTAEAEQATLAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|415950846|ref|ZP_11557013.1| Oligoribonuclease protein [Herbaspirillum frisingense GSF30]
gi|407757575|gb|EKF67531.1| Oligoribonuclease protein [Herbaspirillum frisingense GSF30]
Length = 176
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+ W H SGL DRV+AS+V+ +A++++ F+ +YV +PM G
Sbjct: 42 AVHQSDELLDGMDAWNKGTHGRSGLIDRVKASTVTEADAEQQIIAFLKQYVPAGKSPMCG 101
>gi|70999440|ref|XP_754439.1| RNA exonuclease Rex2 [Aspergillus fumigatus Af293]
gi|66852076|gb|EAL92401.1| RNA exonuclease Rex2, putative [Aspergillus fumigatus Af293]
gi|159127455|gb|EDP52570.1| RNA exonuclease Rex2, putative [Aspergillus fumigatus A1163]
Length = 250
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++++ VL +M+ WCV+ H +GLT V AS+ + A + L ++ +YV P+TA + G
Sbjct: 111 IHHDRSVLDSMSPWCVDTHGRTGLTAAVLASTTNSTTAAESLLAYIQRYVPHPRTALLAG 170
Query: 92 -EYHTSKELLKDSDHFLVFSW 111
H K L + V W
Sbjct: 171 NSVHADKMFLAKEPYKAVLEW 191
>gi|399909446|ref|ZP_10777998.1| oligoribonuclease [Halomonas sp. KM-1]
Length = 194
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 41/72 (56%), Gaps = 1/72 (1%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++ + +L M++W + H SGL +RV+ S + EA+++ +F+ YV P ++PM
Sbjct: 50 IAVHHPDSLLAAMDDWNQKTHGESGLVERVKQSRIDTAEAERQTLEFLRAYVAPGSSPMC 109
Query: 91 G-EYHTSKELLK 101
G H + L+
Sbjct: 110 GNSVHQDRRFLE 121
>gi|332536010|ref|ZP_08411688.1| oligoribonuclease [Pseudoalteromonas haloplanktis ANT/505]
gi|332034620|gb|EGI71185.1| oligoribonuclease [Pseudoalteromonas haloplanktis ANT/505]
Length = 181
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+EWC H SGLT R +AS+ E A + F+ ++V +PM G
Sbjct: 47 AIHQSDELLNGMDEWCTTQHGKSGLTARCKASTFDEEYAVAQTLDFLKQWVPAGVSPMCG 106
>gi|350529563|ref|ZP_08908504.1| oligoribonuclease [Vibrio rotiferianus DAT722]
Length = 181
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 34/55 (61%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
EE L M++WC H ASGL +RVR S VS ++A + +F+ ++V +P+ G
Sbjct: 52 EEELAKMDDWCTNTHTASGLVERVRNSDVSEQDAVAQTIKFLEEWVPKGVSPICG 106
>gi|254427614|ref|ZP_05041321.1| exonuclease superfamily [Alcanivorax sp. DG881]
gi|196193783|gb|EDX88742.1| exonuclease superfamily [Alcanivorax sp. DG881]
Length = 181
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ +L M+EW HHN SGL RV+AS V+ A+ + F+ +YV+ +PM G
Sbjct: 47 AVHQSDALLDGMDEWNTTHHNNSGLVARVKASMVNDAAAESQTIAFLEQYVEAGMSPMCG 106
>gi|330444995|ref|ZP_08308649.1| oligoribonuclease monomer [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
gi|328493113|dbj|GAA03146.1| oligoribonuclease monomer [Photobacterium leiognathi subsp.
mandapamensis svers.1.1.]
Length = 181
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +EE L M++WC H SGL DR+R S+V+ ++A + F+ ++V +P+
Sbjct: 46 LAIHQSEEELAKMDDWCTNTHTNSGLVDRIRKSTVTEQQAVAQTIAFLEQWVPKGVSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|392419584|ref|YP_006456188.1| oligoribonuclease [Pseudomonas stutzeri CCUG 29243]
gi|452748906|ref|ZP_21948681.1| oligoribonuclease [Pseudomonas stutzeri NF13]
gi|390981772|gb|AFM31765.1| oligoribonuclease [Pseudomonas stutzeri CCUG 29243]
gi|452007326|gb|EMD99583.1| oligoribonuclease [Pseudomonas stutzeri NF13]
Length = 180
Score = 47.8 bits (112), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT RVR S +S EA++ F+ ++V +P+
Sbjct: 45 IAVHQSDETLARMDEWNTRQHGGSGLTQRVRESRISTAEAEQATLAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|261345223|ref|ZP_05972867.1| oligoribonuclease [Providencia rustigianii DSM 4541]
gi|282566919|gb|EFB72454.1| oligoribonuclease [Providencia rustigianii DSM 4541]
Length = 180
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ EE L M+EW V H SGL DR+R S+++ EA+ +F+ K+V +P+
Sbjct: 46 IAVHQTEEQLALMDEWNVNTHTGSGLVDRIRKSTINEREAELATIEFLEKWVPKGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|332018384|gb|EGI58978.1| Putative oligoribonuclease [Acromyrmex echinatior]
Length = 228
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 32/55 (58%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++VL+NM++WC H SGL + R S ++EEA +R F+ +V P+ G
Sbjct: 98 DKVLENMSDWCKVQHKKSGLINECRLSKTTLEEAQQRTLNFLENHVPKGACPLAG 152
>gi|120597485|ref|YP_962059.1| oligoribonuclease [Shewanella sp. W3-18-1]
gi|146294374|ref|YP_001184798.1| oligoribonuclease [Shewanella putrefaciens CN-32]
gi|386315104|ref|YP_006011269.1| Exonuclease RNase T and DNA polymerase III [Shewanella putrefaciens
200]
gi|166216588|sp|A4YAL6.1|ORN_SHEPC RecName: Full=Oligoribonuclease
gi|166216590|sp|A1RFR0.1|ORN_SHESW RecName: Full=Oligoribonuclease
gi|120557578|gb|ABM23505.1| Exonuclease, RNase T and DNA polymerase III [Shewanella sp.
W3-18-1]
gi|145566064|gb|ABP76999.1| Exonuclease, RNase T and DNA polymerase III [Shewanella
putrefaciens CN-32]
gi|319427729|gb|ADV55803.1| Exonuclease RNase T and DNA polymerase III [Shewanella putrefaciens
200]
Length = 181
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +EVL M++W +HH SGL DRVRAS + +A + F+ +YV +PM
Sbjct: 46 IAIHQPDEVLAAMDDWNQKHHGESGLIDRVRASQDNEAQAVAKTIAFLEQYVPKGASPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|358372299|dbj|GAA88903.1| RNA exonuclease Rex2 [Aspergillus kawachii IFO 4308]
Length = 172
Score = 47.8 bits (112), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 29/81 (35%), Positives = 44/81 (54%), Gaps = 2/81 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
+++ VL+NMN WC+E H +GLT V+AS+ + EEA L ++ KYV +P+ + G
Sbjct: 35 IHHPTSVLENMNAWCIETHGRTGLTAAVQASTTTAEEAATALLAYIQKYVPQPRRGLLAG 94
Query: 92 -EYHTSKELLKDSDHFLVFSW 111
H K L + V W
Sbjct: 95 NSVHADKAFLAKGPYQAVLEW 115
>gi|359442620|ref|ZP_09232483.1| oligoribonuclease [Pseudoalteromonas sp. BSi20429]
gi|392534623|ref|ZP_10281760.1| oligoribonuclease [Pseudoalteromonas arctica A 37-1-2]
gi|358035491|dbj|GAA68732.1| oligoribonuclease [Pseudoalteromonas sp. BSi20429]
Length = 181
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+EWC H SGLT R +AS+ A ++ F+ ++V T+PM G
Sbjct: 47 AIHQSDELLNGMDEWCTTQHGKSGLTARCKASTFDEAYAVEQTLAFLKQWVPAGTSPMCG 106
>gi|359424206|ref|ZP_09215328.1| oligoribonuclease [Gordonia amarae NBRC 15530]
gi|358240480|dbj|GAB04910.1| oligoribonuclease [Gordonia amarae NBRC 15530]
Length = 198
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 36/59 (61%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M + + H ASGLTD VR S+V+IEEA +++ ++ KY P+ G
Sbjct: 45 IHASDEDLAGMPDVVTKMHAASGLTDEVRTSTVTIEEAQEQVLAYLRKYTTTGAVPLAG 103
>gi|292493403|ref|YP_003528842.1| exonuclease RNase T and DNA polymerase III [Nitrosococcus
halophilus Nc4]
gi|291581998|gb|ADE16455.1| Exonuclease RNase T and DNA polymerase III [Nitrosococcus
halophilus Nc4]
Length = 183
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ N+ +L NM+EW H SGL +RVR S + A++R +F+ ++ ++P+ G
Sbjct: 47 AIHQNDAILDNMDEWNTRQHTKSGLVERVRHSLIDEATAEQRTLEFLGQHTHANSSPLCG 106
>gi|319792320|ref|YP_004153960.1| exonuclease rnase t and DNA polymerase iii [Variovorax paradoxus
EPS]
gi|315594783|gb|ADU35849.1| Exonuclease RNase T and DNA polymerase III [Variovorax paradoxus
EPS]
Length = 198
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ VL M+ W H SGL D+V+AS++ A+++L +F+AKY+ +PM G
Sbjct: 63 IHQSDAVLDAMDAWNKGTHGRSGLIDKVKASTLDEAAAEQQLLEFIAKYIPRSGSPMCG 121
>gi|239814490|ref|YP_002943400.1| oligoribonuclease [Variovorax paradoxus S110]
gi|239801067|gb|ACS18134.1| Exonuclease RNase T and DNA polymerase III [Variovorax paradoxus
S110]
Length = 198
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 37/59 (62%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ VL M+ W H SGL D+V+AS++ A+++L +FVA+YV +PM G
Sbjct: 63 IHQSDAVLDAMDAWNKGTHGRSGLIDKVKASTLDEAAAEQQLLEFVARYVPRSGSPMCG 121
>gi|443471099|ref|ZP_21061172.1| 3'-to-5' oligoribonuclease (orn) [Pseudomonas pseudoalcaligenes
KF707]
gi|442901002|gb|ELS27001.1| 3'-to-5' oligoribonuclease (orn) [Pseudomonas pseudoalcaligenes
KF707]
Length = 180
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L M+EW H SGLT RVR S + EA+ + F+ ++V +P+
Sbjct: 45 IAIHQSDEILAGMDEWNTRQHGQSGLTQRVRESRIDTAEAEAQTLAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|226942895|ref|YP_002797968.1| oligoribonuclease [Azotobacter vinelandii DJ]
gi|226717822|gb|ACO76993.1| Exonuclease [Azotobacter vinelandii DJ]
Length = 180
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+EW H SGLT RVR S + A+ R F+ ++V +PM G
Sbjct: 46 AVHQSDEILAGMDEWNTRQHGRSGLTQRVRDSRIDTATAEARTLAFLEQWVPRGKSPMCG 105
>gi|398808969|ref|ZP_10567825.1| oligoribonuclease (3'->5' exoribonuclease) [Variovorax sp. CF313]
gi|398086550|gb|EJL77164.1| oligoribonuclease (3'->5' exoribonuclease) [Variovorax sp. CF313]
Length = 216
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 37/59 (62%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ VL M+ W H SGL D+V+AS++ A+++L +F+AKY+ +PM G
Sbjct: 81 IHQSDAVLDAMDAWNKGTHGRSGLIDKVKASTLDEAAAEQQLLEFIAKYIPRSGSPMCG 139
>gi|146329636|ref|YP_001209796.1| oligoribonuclease [Dichelobacter nodosus VCS1703A]
gi|166216257|sp|A5EY84.1|ORN_DICNV RecName: Full=Oligoribonuclease
gi|146233106|gb|ABQ14084.1| oligoribonuclease [Dichelobacter nodosus VCS1703A]
Length = 180
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 35/61 (57%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+Y E +L M+ W +HH ASGL +RVR SS + EA+ + F+ +Y + +P+
Sbjct: 45 IAVYQPEPILAQMDAWNQKHHGASGLIERVRQSSFNTLEAEAQTLSFLEQYSEKGRSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|401411143|ref|XP_003885019.1| Oligoribonuclease, related [Neospora caninum Liverpool]
gi|325119438|emb|CBZ54991.1| Oligoribonuclease, related [Neospora caninum Liverpool]
Length = 342
Score = 47.8 bits (112), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 50/89 (56%), Gaps = 9/89 (10%)
Query: 21 AYLQTQGTCK-------CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKR 73
A + T G C+ ++ ++++L M+EWC + H SGLT R S+ ++ +A+++
Sbjct: 188 AVIVTDGQCRRRIVGPHLIIHASDKLLDGMDEWCKKTHGNSGLTAACRQSTTTLADAEEK 247
Query: 74 LHQFVAKYVK-PKTAPMVG-EYHTSKELL 100
+ FV+++V + AP+ G H ++ L
Sbjct: 248 ILDFVSRHVATTRVAPLGGNSVHVDRQFL 276
>gi|350634719|gb|EHA23081.1| hypothetical protein ASPNIDRAFT_197516 [Aspergillus niger ATCC
1015]
Length = 782
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 29/81 (35%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
+++ VL NMN WC+E H +GLT V+AS+ + EEA L ++ KYV +P+ + G
Sbjct: 646 IHHPTSVLDNMNAWCIETHGRTGLTAAVQASTTTAEEAATALLAYIQKYVPQPRRGLLAG 705
Query: 92 -EYHTSKELLKDSDHFLVFSW 111
H K L + V W
Sbjct: 706 NSVHADKAFLAKGPYQAVLDW 726
>gi|296824674|ref|XP_002850692.1| oligoribonuclease [Arthroderma otae CBS 113480]
gi|238838246|gb|EEQ27908.1| oligoribonuclease [Arthroderma otae CBS 113480]
Length = 188
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG-EYH 94
++VL MN WC++ H SGLT +S+ + EEA L ++ +YV K +TA + G H
Sbjct: 55 QDVLDRMNAWCIDTHGRSGLTAASLSSTTTAEEAASDLLAYIKRYVPKQRTALLAGNSVH 114
Query: 95 TSKELLKDSDHFLVFSW 111
+ L + W
Sbjct: 115 ADRAFLAQQPYAKALGW 131
>gi|284799973|ref|ZP_05985349.2| oligoribonuclease [Neisseria subflava NJ9703]
gi|284796237|gb|EFC51584.1| oligoribonuclease [Neisseria subflava NJ9703]
Length = 230
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+EW H +GLT RVR S ++ E ++ L F++ ++ K+ PM G
Sbjct: 93 IHQSDELLDGMDEWNTATHGRTGLTQRVRESKLTEAEVEQNLLDFMSAWIPEKSTPMCG 151
>gi|121634222|ref|YP_974467.1| oligoribonuclease [Neisseria meningitidis FAM18]
gi|385324816|ref|YP_005879255.1| oligoribonuclease [Neisseria meningitidis 8013]
gi|385339394|ref|YP_005893266.1| oligoribonuclease [Neisseria meningitidis G2136]
gi|416179644|ref|ZP_11611080.1| oligoribonuclease [Neisseria meningitidis M6190]
gi|416193274|ref|ZP_11617113.1| oligoribonuclease [Neisseria meningitidis ES14902]
gi|416207901|ref|ZP_11621014.1| oligoribonuclease [Neisseria meningitidis 961-5945]
gi|433467907|ref|ZP_20425356.1| exonuclease family protein [Neisseria meningitidis 87255]
gi|433493279|ref|ZP_20450364.1| exonuclease family protein [Neisseria meningitidis NM586]
gi|433495332|ref|ZP_20452393.1| exonuclease family protein [Neisseria meningitidis NM762]
gi|433496063|ref|ZP_20453112.1| exonuclease family protein [Neisseria meningitidis M7089]
gi|433498020|ref|ZP_20455036.1| exonuclease family protein [Neisseria meningitidis M7124]
gi|433501520|ref|ZP_20458501.1| exonuclease family protein [Neisseria meningitidis NM174]
gi|433503668|ref|ZP_20460623.1| exonuclease family protein [Neisseria meningitidis NM126]
gi|166216273|sp|A1KS35.1|ORN_NEIMF RecName: Full=Oligoribonuclease
gi|120865928|emb|CAM09665.1| putative oligoribonuclease [Neisseria meningitidis FAM18]
gi|261393203|emb|CAX50822.1| oligoribonuclease [Neisseria meningitidis 8013]
gi|325131506|gb|EGC54213.1| oligoribonuclease [Neisseria meningitidis M6190]
gi|325137552|gb|EGC60134.1| oligoribonuclease [Neisseria meningitidis ES14902]
gi|325141599|gb|EGC64064.1| oligoribonuclease [Neisseria meningitidis 961-5945]
gi|325197638|gb|ADY93094.1| oligoribonuclease [Neisseria meningitidis G2136]
gi|432201459|gb|ELK57540.1| exonuclease family protein [Neisseria meningitidis 87255]
gi|432226520|gb|ELK82247.1| exonuclease family protein [Neisseria meningitidis NM586]
gi|432227964|gb|ELK83666.1| exonuclease family protein [Neisseria meningitidis NM762]
gi|432233361|gb|ELK88989.1| exonuclease family protein [Neisseria meningitidis NM174]
gi|432236787|gb|ELK92391.1| exonuclease family protein [Neisseria meningitidis M7124]
gi|432237705|gb|ELK93298.1| exonuclease family protein [Neisseria meningitidis M7089]
gi|432238870|gb|ELK94433.1| exonuclease family protein [Neisseria meningitidis NM126]
Length = 187
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L NM+EW H +GLT RVR S + E +++L F++++V + PM G
Sbjct: 46 AVHQSDELLDNMDEWNTATHGRTGLTQRVRESLHTEAEVEQKLLDFMSEWVPGRATPMCG 105
>gi|301063709|ref|ZP_07204220.1| exonuclease [delta proteobacterium NaphS2]
gi|300442182|gb|EFK06436.1| exonuclease [delta proteobacterium NaphS2]
Length = 177
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ E L M W +EHH ASGL DR++ S S E+A++ F+ ++ + +P+ G
Sbjct: 45 IHQPESTLSAMEPWSLEHHQASGLLDRIKTSVYSTEQAEEETLSFIRQFCQRGHSPLCG 103
>gi|225077243|ref|ZP_03720442.1| hypothetical protein NEIFLAOT_02298 [Neisseria flavescens
NRL30031/H210]
gi|224951387|gb|EEG32596.1| hypothetical protein NEIFLAOT_02298 [Neisseria flavescens
NRL30031/H210]
Length = 230
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+EW H +GLT RVR S ++ E ++ L F++ ++ K+ PM G
Sbjct: 93 IHQSDELLDGMDEWNTATHGRTGLTQRVRESKLTEAEVEQNLLDFMSAWIPEKSTPMCG 151
>gi|254787466|ref|YP_003074895.1| oligoribonuclease [Teredinibacter turnerae T7901]
gi|237686441|gb|ACR13705.1| oligoribonuclease [Teredinibacter turnerae T7901]
Length = 182
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + VL M+EWC H SGLT RVR S V+ A+ F+ ++V +PM G
Sbjct: 47 AIHQPDAVLDLMDEWCTNQHGKSGLTQRVRDSDVTTANAEVATLAFLCEWVPAGKSPMCG 106
>gi|242011645|ref|XP_002426558.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212510695|gb|EEB13820.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1690
Score = 47.4 bits (111), Expect = 0.001, Method: Composition-based stats.
Identities = 20/26 (76%), Positives = 23/26 (88%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
P+N ALSS+EQ+K YLQT GTCKCGL
Sbjct: 3 PTNIALSSIEQIKMYLQTMGTCKCGL 28
>gi|416944418|ref|ZP_11934814.1| oligoribonuclease [Burkholderia sp. TJI49]
gi|325524019|gb|EGD02205.1| oligoribonuclease [Burkholderia sp. TJI49]
Length = 208
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ L M++W H SGL DRVRAS+V+ EA +L F+ +YV P +PM G
Sbjct: 59 AIHQSDATLAKMDDWNKSTHGRSGLIDRVRASTVTEAEAAAQLQAFLMQYVSPGKSPMCG 118
>gi|385329110|ref|YP_005883413.1| putative oligoribonuclease [Neisseria meningitidis alpha710]
gi|308389962|gb|ADO32282.1| putative oligoribonuclease [Neisseria meningitidis alpha710]
Length = 215
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L NM+EW H +GLT RVR S + E +++L F++++V + PM G
Sbjct: 74 AVHQSDELLDNMDEWNTATHGRTGLTQRVRESLHTEAEVEQKLLDFMSEWVPGRATPMCG 133
>gi|421563950|ref|ZP_16009762.1| oligoribonuclease [Neisseria meningitidis NM2795]
gi|421906252|ref|ZP_16336154.1| oligoribonuclease [Neisseria meningitidis alpha704]
gi|393292658|emb|CCI72072.1| oligoribonuclease [Neisseria meningitidis alpha704]
gi|402339569|gb|EJU74783.1| oligoribonuclease [Neisseria meningitidis NM2795]
Length = 187
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L NM+EW H +GLT RVR S + E +++L F++++V + PM G
Sbjct: 46 AVHQSDELLDNMDEWNTATHGRTGLTQRVRESLHTEAEVEQKLLDFMSEWVPGRATPMCG 105
>gi|366997200|ref|XP_003678362.1| hypothetical protein NCAS_0J00420 [Naumovozyma castellii CBS 4309]
gi|342304234|emb|CCC72021.1| hypothetical protein NCAS_0J00420 [Naumovozyma castellii CBS 4309]
Length = 296
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 34/53 (64%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK 85
++Y +V+ +MNEWC++ H SGLT +V S + E+ ++ L ++ K++ K
Sbjct: 106 IHYGNDVMDHMNEWCIDQHGKSGLTQKVLDSKKTREQVEEELLAYIKKFIPEK 158
>gi|421862948|ref|ZP_16294650.1| unnamed protein product [Neisseria lactamica Y92-1009]
gi|309379479|emb|CBX21845.1| unnamed protein product [Neisseria lactamica Y92-1009]
Length = 187
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L NM+EW H +GLT RVR S + E +++L F++++V + PM G
Sbjct: 46 AVHQSDELLDNMDEWNTATHGRTGLTQRVRESLHTEAEVEQKLLDFMSEWVPGRATPMCG 105
>gi|254671000|emb|CBA07757.1| oligoribonuclease [Neisseria meningitidis alpha153]
Length = 215
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L NM+EW H +GLT RVR S + E +++L F++++V + PM G
Sbjct: 74 AVHQSDELLDNMDEWNTATHGRTGLTQRVRESLHTEAEVEQKLLDFMSEWVPGRATPMCG 133
>gi|149910187|ref|ZP_01898833.1| Oligoribonuclease [Moritella sp. PE36]
gi|149806773|gb|EDM66737.1| Oligoribonuclease [Moritella sp. PE36]
Length = 188
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ L M+EWC HH SGL RV AS V+ +EA ++ F+ K+V +P+ G
Sbjct: 54 AIHQDKAELDKMDEWCTTHHTNSGLVKRVLASEVTEKEAVEQTLAFLHKWVPAGKSPLCG 113
>gi|391338340|ref|XP_003743517.1| PREDICTED: oligoribonuclease, mitochondrial-like [Metaseiulus
occidentalis]
Length = 193
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 36/62 (58%)
Query: 30 KCGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPM 89
K +++ VL M+EWC H SGLT S++SI+EA+ R+ + + ++ P AP+
Sbjct: 56 KIVVHHPSYVLNAMDEWCKTTHGKSGLTAECLQSTLSIQEAEDRILKLLVEHTNPGEAPL 115
Query: 90 VG 91
G
Sbjct: 116 GG 117
>gi|406946742|gb|EKD77849.1| hypothetical protein ACD_42C00153G0002 [uncultured bacterium]
Length = 180
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + +L M+ W ++HH SGL RV+ S V+ +A+ + F+ ++V P+ +PM G
Sbjct: 48 AIHQPQSLLDGMDGWNIKHHTQSGLVRRVQMSVVTESQAEASMLAFLKEFVPPQKSPMCG 107
>gi|456063784|ref|YP_007502754.1| oligoribonuclease [beta proteobacterium CB]
gi|455441081|gb|AGG34019.1| oligoribonuclease [beta proteobacterium CB]
Length = 195
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 38/72 (52%), Gaps = 1/72 (1%)
Query: 21 AYLQTQGTCKCGLYYNEEVLQN-MNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVA 79
A+L T T + + ++ L + M+ W H SGL D+V+AS+ A+ F+
Sbjct: 46 AHLNTIATAPVWVIHQDDALLDAMDAWNKGTHGRSGLIDKVKASTTDEATAEAECIAFLK 105
Query: 80 KYVKPKTAPMVG 91
KY+KP APM G
Sbjct: 106 KYIKPGIAPMCG 117
>gi|167854572|ref|ZP_02477353.1| oligoribonuclease [Haemophilus parasuis 29755]
gi|167854327|gb|EDS25560.1| oligoribonuclease [Haemophilus parasuis 29755]
Length = 183
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +E+L M+EWCV+ H A+GL +RV+ S ++ A+ + F+ K+V +P+
Sbjct: 47 LAVHQPDELLNKMSEWCVKTHTANGLVERVKQSKLTERAAELQTLDFLKKWVPKGASPIC 106
Query: 91 G 91
G
Sbjct: 107 G 107
>gi|157373929|ref|YP_001472529.1| oligoribonuclease [Shewanella sediminis HAW-EB3]
gi|157316303|gb|ABV35401.1| exonuclease, RNase T and DNA polymerase III [Shewanella sediminis
HAW-EB3]
Length = 181
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 35/61 (57%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +EE L M++W +HH SGL DRVRAS S E+A F++++ +PM
Sbjct: 46 IAIHQSEEQLARMDDWNQKHHGESGLVDRVRASKYSEEQAVAMTIAFLSQHATKGDSPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|406941429|gb|EKD73922.1| hypothetical protein ACD_45C00142G0003 [uncultured bacterium]
Length = 185
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + E+L +M+ W + HN+SGL RV+AS+V+ +A+ F+ +YV +PM G
Sbjct: 47 AIHQSNELLNSMDNWNTKQHNSSGLVARVKASTVTEADAEMATLNFLKQYVPAGKSPMCG 106
>gi|385301802|gb|EIF45966.1| rna exonuclease [Dekkera bruxellensis AWRI1499]
Length = 216
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ M+EWC +HH SGLT V AS + E+ DK L +++ K++ T + G
Sbjct: 65 MDQMDEWCTQHHGNSGLTAEVIASDKTKEQVDKELLEYLKKFMSKGTGILAG 116
>gi|357167541|ref|XP_003581213.1| PREDICTED: oligoribonuclease-like isoform 2 [Brachypodium
distachyon]
Length = 255
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/64 (37%), Positives = 37/64 (57%), Gaps = 8/64 (12%)
Query: 36 NEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLH--------QFVAKYVKPKTA 87
++E L +MNEWC HH ASGLT++V S +S +A+K++ FV +Y+ T
Sbjct: 111 SKECLDDMNEWCKIHHGASGLTEKVLQSDISEHDAEKQVSCVSYFQVLDFVRRYIGSATP 170
Query: 88 PMVG 91
+ G
Sbjct: 171 LIAG 174
>gi|416198801|ref|ZP_11619168.1| oligoribonuclease [Neisseria meningitidis CU385]
gi|416214620|ref|ZP_11622984.1| oligoribonuclease [Neisseria meningitidis M01-240013]
gi|427826498|ref|ZP_18993548.1| exonuclease family protein [Neisseria meningitidis H44/76]
gi|316985472|gb|EFV64419.1| exonuclease family protein [Neisseria meningitidis H44/76]
gi|325139523|gb|EGC62063.1| oligoribonuclease [Neisseria meningitidis CU385]
gi|325143758|gb|EGC66075.1| oligoribonuclease [Neisseria meningitidis M01-240013]
Length = 203
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +++VL M+EW H +GLT RVR SS + E +++L F++++V + PM G
Sbjct: 62 AVHQSDDVLNKMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPGRATPMCG 121
>gi|254360517|ref|ZP_04976666.1| exoribonuclease II [Mannheimia haemolytica PHL213]
gi|261492357|ref|ZP_05988919.1| exoribonuclease II [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|261496143|ref|ZP_05992551.1| exoribonuclease II [Mannheimia haemolytica serotype A2 str. OVINE]
gi|452744765|ref|ZP_21944606.1| oligoribonuclease [Mannheimia haemolytica serotype 6 str. H23]
gi|153091057|gb|EDN73062.1| exoribonuclease II [Mannheimia haemolytica PHL213]
gi|261308245|gb|EEY09540.1| exoribonuclease II [Mannheimia haemolytica serotype A2 str. OVINE]
gi|261312040|gb|EEY13181.1| exoribonuclease II [Mannheimia haemolytica serotype A2 str. BOVINE]
gi|452087183|gb|EME03565.1| oligoribonuclease [Mannheimia haemolytica serotype 6 str. H23]
Length = 184
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 39/61 (63%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +++L+ M++WCV+ H A+GL +RV+AS ++ A+ + F+ ++V +P+
Sbjct: 46 LAVHQTDDLLEKMSDWCVKTHTANGLIERVKASKLTERAAELQTLDFLKRWVPKGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|56478391|ref|YP_159980.1| oligoribonuclease [Aromatoleum aromaticum EbN1]
gi|81821041|sp|Q5P0T5.1|ORN_AZOSE RecName: Full=Oligoribonuclease
gi|56314434|emb|CAI09079.1| oligoribonuclease [Aromatoleum aromaticum EbN1]
Length = 183
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ + VL M+EW H SGLTDRV+AS + +A+ ++ F+ ++V T+PM
Sbjct: 46 IAVHQPDSVLDAMDEWNRNTHGKSGLTDRVKASLIGEADAEAQMLAFLQQHVPAHTSPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|258652005|ref|YP_003201161.1| exonuclease RNase T and DNA polymerase III [Nakamurella
multipartita DSM 44233]
gi|258555230|gb|ACV78172.1| Exonuclease RNase T and DNA polymerase III [Nakamurella
multipartita DSM 44233]
Length = 212
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++ ++ L M + E H SGLTDRVR S+V++ +A++ + ++ ++V +PK+AP+ G
Sbjct: 45 IHADDAALAAMPQVVTEMHAKSGLTDRVRESTVTMAQAEQLVLDYIREFVPEPKSAPLAG 104
>gi|15677698|ref|NP_274859.1| oligoribonuclease [Neisseria meningitidis MC58]
gi|385851952|ref|YP_005898467.1| oligoribonuclease [Neisseria meningitidis M04-240196]
gi|385853917|ref|YP_005900431.1| oligoribonuclease [Neisseria meningitidis H44/76]
gi|416184808|ref|ZP_11613125.1| oligoribonuclease [Neisseria meningitidis M13399]
gi|433465842|ref|ZP_20423312.1| exonuclease family protein [Neisseria meningitidis NM422]
gi|433489037|ref|ZP_20446186.1| exonuclease family protein [Neisseria meningitidis M13255]
gi|433491215|ref|ZP_20448327.1| exonuclease family protein [Neisseria meningitidis NM418]
gi|433505701|ref|ZP_20462632.1| exonuclease family protein [Neisseria meningitidis 9506]
gi|433507852|ref|ZP_20464748.1| exonuclease family protein [Neisseria meningitidis 9757]
gi|433509980|ref|ZP_20466837.1| exonuclease family protein [Neisseria meningitidis 12888]
gi|433512079|ref|ZP_20468893.1| exonuclease family protein [Neisseria meningitidis 4119]
gi|11133786|sp|Q9JXW1.1|ORN_NEIMB RecName: Full=Oligoribonuclease
gi|7227120|gb|AAF42197.1| oligoribonuclease [Neisseria meningitidis MC58]
gi|325133508|gb|EGC56171.1| oligoribonuclease [Neisseria meningitidis M13399]
gi|325200921|gb|ADY96376.1| oligoribonuclease [Neisseria meningitidis H44/76]
gi|325206775|gb|ADZ02228.1| oligoribonuclease [Neisseria meningitidis M04-240196]
gi|432200539|gb|ELK56629.1| exonuclease family protein [Neisseria meningitidis NM422]
gi|432221033|gb|ELK76848.1| exonuclease family protein [Neisseria meningitidis M13255]
gi|432225349|gb|ELK81092.1| exonuclease family protein [Neisseria meningitidis NM418]
gi|432239062|gb|ELK94621.1| exonuclease family protein [Neisseria meningitidis 9757]
gi|432239186|gb|ELK94744.1| exonuclease family protein [Neisseria meningitidis 9506]
gi|432244918|gb|ELL00397.1| exonuclease family protein [Neisseria meningitidis 12888]
gi|432245236|gb|ELL00707.1| exonuclease family protein [Neisseria meningitidis 4119]
Length = 187
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +++VL M+EW H +GLT RVR SS + E +++L F++++V + PM G
Sbjct: 46 AVHQSDDVLNKMDEWNTATHGRTGLTQRVRESSHTEAEVEQKLLDFMSEWVPGRATPMCG 105
>gi|254442129|ref|ZP_05055605.1| exonuclease superfamily [Verrucomicrobiae bacterium DG1235]
gi|198256437|gb|EDY80745.1| exonuclease superfamily [Verrucomicrobiae bacterium DG1235]
Length = 193
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 33/54 (61%), Gaps = 2/54 (3%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+EVL+ MN+WC HH SGL DR++ ++ EE D +L + KY K K P V
Sbjct: 49 QEVLEGMNDWCKHHHAESGLLDRIQ-DGITEEELDDKLAEITLKYFK-KNNPCV 100
>gi|345482995|ref|XP_001603963.2| PREDICTED: oligoribonuclease, mitochondrial-like [Nasonia
vitripennis]
Length = 216
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 34/59 (57%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E+V + M WC E HN +GL + R S + E A++ L +F KYV T P+ G
Sbjct: 83 IHQSEDVFETMIPWCQEQHNKTGLIEASRNSIFNEEMAEEELIRFFRKYVPHNTCPLAG 141
>gi|269964116|ref|ZP_06178417.1| oligoribonuclease [Vibrio harveyi 1DA3]
gi|424048107|ref|ZP_17785662.1| oligoribonuclease [Vibrio cholerae HENC-03]
gi|269831150|gb|EEZ85308.1| oligoribonuclease [Vibrio harveyi 1DA3]
gi|408883074|gb|EKM21865.1| oligoribonuclease [Vibrio cholerae HENC-03]
Length = 181
Score = 47.4 bits (111), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
EE L M++WC H ASGL +RV+ S +S ++A + +F+ K+V +P+ G
Sbjct: 52 EEELAKMDDWCTNTHTASGLVERVQNSQISEQDAVAQTIEFLEKWVPKGVSPICG 106
>gi|336316416|ref|ZP_08571315.1| oligoribonuclease (3'->5' exoribonuclease) [Rheinheimera sp. A13L]
gi|335879285|gb|EGM77185.1| oligoribonuclease (3'->5' exoribonuclease) [Rheinheimera sp. A13L]
Length = 183
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/55 (40%), Positives = 30/55 (54%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+EVL M+ WC E H SGLT R S V + +A + F++ YV +PM G
Sbjct: 52 KEVLDGMDAWCTETHGKSGLTKRCLESEVELADAMAQTISFLSDYVPAGKSPMCG 106
>gi|449143315|ref|ZP_21774153.1| oligoribonuclease [Vibrio mimicus CAIM 602]
gi|449081055|gb|EMB51951.1| oligoribonuclease [Vibrio mimicus CAIM 602]
Length = 181
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 32/61 (52%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ E L M+EWC H SGL RVR S VS EEA + F+ ++V +P+
Sbjct: 46 IAIHQPESELAKMDEWCTTTHTGSGLVARVRQSQVSEEEAIDQTLAFLKQWVPEGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|444350057|ref|ZP_21157309.1| LOW QUALITY PROTEIN: oligoribonuclease [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
gi|443543259|gb|ELT53518.1| LOW QUALITY PROTEIN: oligoribonuclease [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
Length = 125
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/49 (40%), Positives = 32/49 (65%)
Query: 43 MNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
M+EWCV+ H A+GL +RV+AS ++ A+ + F+ KYV +P+ G
Sbjct: 1 MSEWCVKTHTANGLIERVKASKLTKRAAELQTLDFLKKYVPKGASPICG 49
>gi|30683321|ref|NP_850090.1| oligoribonuclease [Arabidopsis thaliana]
gi|83305201|sp|Q9ZVE0.2|ORN_ARATH RecName: Full=Oligoribonuclease
gi|17381150|gb|AAL36387.1| unknown protein [Arabidopsis thaliana]
gi|25054981|gb|AAN71962.1| unknown protein [Arabidopsis thaliana]
gi|330252818|gb|AEC07912.1| oligoribonuclease [Arabidopsis thaliana]
Length = 222
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ L M++WC HH ASGLT +V S+++ EA++++ +FV K+V + G
Sbjct: 90 KDCLDKMDDWCQTHHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNPLLAG 144
>gi|3885327|gb|AAC77855.1| hypothetical protein [Arabidopsis thaliana]
Length = 227
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ L M++WC HH ASGLT +V S+++ EA++++ +FV K+V + G
Sbjct: 71 KDCLDKMDDWCQTHHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNPLLAG 125
>gi|443672492|ref|ZP_21137576.1| Oligoribonuclease [Rhodococcus sp. AW25M09]
gi|443414992|emb|CCQ15914.1| Oligoribonuclease [Rhodococcus sp. AW25M09]
Length = 206
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ +++ L NM H SGLTD VRAS VS+EEA++R+ ++ ++V T P+ G
Sbjct: 48 IHADDDALANMPAVVTAMHAKSGLTDEVRASEVSLEEAEQRVLAYIKEHVPVAGTVPLAG 107
>gi|433537349|ref|ZP_20493845.1| exonuclease family protein [Neisseria meningitidis 77221]
gi|432271772|gb|ELL26894.1| exonuclease family protein [Neisseria meningitidis 77221]
Length = 187
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L NM+EW H +GLT RVR S + E +++L F+++++ + PM G
Sbjct: 46 AVHQSDELLDNMDEWNTATHGRTGLTQRVRESLHTEAEIEQKLLDFMSEWIPERATPMCG 105
>gi|333912930|ref|YP_004486662.1| oligoribonuclease [Delftia sp. Cs1-4]
gi|333743130|gb|AEF88307.1| Oligoribonuclease [Delftia sp. Cs1-4]
Length = 204
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + +L M+ W H SGL DRV+AS++S +A+ L +F+++YV AP+ G
Sbjct: 70 AIHQADALLDGMDAWNKGTHGRSGLIDRVKASTISEADAEAALIKFLSQYVPKAKAPLCG 129
>gi|294658997|ref|XP_461325.2| DEHA2F22594p [Debaryomyces hansenii CBS767]
gi|202953536|emb|CAG89730.2| DEHA2F22594p [Debaryomyces hansenii CBS767]
Length = 295
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRV-RASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+Y +EVL MNEWCV H SGLT ++ + + + L +++ +YV+P M G
Sbjct: 131 VYQPKEVLDGMNEWCVNQHGKSGLTAKILENPQCELSKIEDELLEYIKQYVQPNKGIMAG 190
>gi|84386967|ref|ZP_00989991.1| oligoribonuclease [Vibrio splendidus 12B01]
gi|84378257|gb|EAP95116.1| oligoribonuclease [Vibrio splendidus 12B01]
Length = 181
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M+EWC H SGL R++ S+VS +EA ++ +F+ K+V +P+ G
Sbjct: 55 LDKMDEWCTTTHTGSGLVKRIQESTVSEQEAIQQTIEFLEKWVPKGKSPICG 106
>gi|79323145|ref|NP_001031426.1| oligoribonuclease [Arabidopsis thaliana]
gi|222423704|dbj|BAH19818.1| AT2G26970 [Arabidopsis thaliana]
gi|330252819|gb|AEC07913.1| oligoribonuclease [Arabidopsis thaliana]
Length = 218
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 35/55 (63%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ L M++WC HH ASGLT +V S+++ EA++++ +FV K+V + G
Sbjct: 86 KDCLDKMDDWCQTHHGASGLTKKVLLSAITEREAEQKVIEFVKKHVGSGNPLLAG 140
>gi|358379171|gb|EHK16852.1| hypothetical protein TRIVIDRAFT_40926 [Trichoderma virens Gv29-8]
Length = 183
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
+++ L M+EWC H SGLT V AS + +A + L++++ K++ KP+TA + G
Sbjct: 46 IHWPASRLDQMDEWCTNTHGKSGLTAAVIASDTTPAQAAEGLYRYITKFIPKPRTALLAG 105
Query: 92 -EYHTSKELLK 101
H + L+
Sbjct: 106 NSVHADRAFLR 116
>gi|328718000|ref|XP_001952725.2| PREDICTED: hypothetical protein LOC100167706 [Acyrthosiphon pisum]
Length = 1341
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 22/26 (84%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PSN L+S++Q K YLQTQGTCKCGL
Sbjct: 91 PSNAVLNSLDQAKIYLQTQGTCKCGL 116
>gi|387770124|ref|ZP_10126310.1| oligoribonuclease [Pasteurella bettyae CCUG 2042]
gi|386904941|gb|EIJ69723.1| oligoribonuclease [Pasteurella bettyae CCUG 2042]
Length = 180
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L M++WC++ H +GL +RV+AS ++ A+ + F+ K+V +P+
Sbjct: 46 LAIHQSDELLNKMSDWCIKTHTENGLVERVKASKLTERAAELQTLDFLKKWVSKGVSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|453073850|ref|ZP_21976649.1| oligoribonuclease [Rhodococcus triatomae BKS 15-14]
gi|452765876|gb|EME24130.1| oligoribonuclease [Rhodococcus triatomae BKS 15-14]
Length = 199
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK-TAPMVG 91
++ ++ L +M E E H SGLTD VRAS+V++EEA +R+ ++ +++ TAP+ G
Sbjct: 45 IHADDAALADMPEVVQEMHAKSGLTDEVRASTVTMEEAQERVLAYIREHIPTAGTAPLCG 104
>gi|385302297|gb|EIF46435.1| rna exonuclease [Dekkera bruxellensis AWRI1499]
Length = 190
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ M+EWC +HH SGLT V AS + E+ DK L +++ K++ T + G
Sbjct: 65 MDXMDEWCTQHHGNSGLTAEVIASBKTKEQVDKELLEYLKKFMSKGTGILAG 116
>gi|54023254|ref|YP_117496.1| oligoribonuclease [Nocardia farcinica IFM 10152]
gi|59797997|sp|Q5Z0A9.1|ORN_NOCFA RecName: Full=Oligoribonuclease
gi|54014762|dbj|BAD56132.1| putative oligoribonuclease [Nocardia farcinica IFM 10152]
Length = 216
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++ L M E H SGLTD VR S+V++ EA++++ ++ +YV P+T P+ G
Sbjct: 46 IHADDAALAAMPPVVAEMHARSGLTDEVRRSTVTVAEAEQQVLDYIRQYVPTPRTVPLAG 105
>gi|398404294|ref|XP_003853613.1| hypothetical protein MYCGRDRAFT_108384 [Zymoseptoria tritici
IPO323]
gi|339473496|gb|EGP88589.1| hypothetical protein MYCGRDRAFT_108384 [Zymoseptoria tritici
IPO323]
Length = 203
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+++++E L M EWC HH +SGLT SS + E+A + L Q++ KY + ++
Sbjct: 51 IHHSQEQLDAMGEWCTSHHGSSGLTKACLDSSTTAEQAAEELLQYIQKYAPERKKALLA 109
>gi|302508317|ref|XP_003016119.1| hypothetical protein ARB_05516 [Arthroderma benhamiae CBS 112371]
gi|291179688|gb|EFE35474.1| hypothetical protein ARB_05516 [Arthroderma benhamiae CBS 112371]
Length = 172
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 39/77 (50%), Gaps = 2/77 (2%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKP-KTAPMVG-EYH 94
++VL MN WC++ H SGLT V +SS + EE L ++ +YV +TA + G H
Sbjct: 39 QDVLDRMNAWCIDTHGRSGLTAAVLSSSTTAEEVACDLLAYIKQYVPTHRTALLAGNSVH 98
Query: 95 TSKELLKDSDHFLVFSW 111
+ L + V W
Sbjct: 99 ADRAFLAKPPYAQVLDW 115
>gi|289209008|ref|YP_003461074.1| exonuclease RNase T and DNA polymerase III [Thioalkalivibrio sp.
K90mix]
gi|288944639|gb|ADC72338.1| Exonuclease RNase T and DNA polymerase III [Thioalkalivibrio sp.
K90mix]
Length = 188
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+Y EVL+ M+EW H SGL +R+R SS A++ F++ YV +PM G
Sbjct: 47 AIYQPTEVLEAMDEWNRRTHGESGLIERIRHSSTDAAAAERETIAFLSDYVPKGASPMCG 106
>gi|343511368|ref|ZP_08748534.1| oligoribonuclease [Vibrio scophthalmi LMG 19158]
gi|343514030|ref|ZP_08751115.1| oligoribonuclease [Vibrio sp. N418]
gi|342798419|gb|EGU34038.1| oligoribonuclease [Vibrio scophthalmi LMG 19158]
gi|342800891|gb|EGU36394.1| oligoribonuclease [Vibrio sp. N418]
Length = 181
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ E L M++WC H SGL +R+R SSV+ +EA ++ +F+ ++V +P+
Sbjct: 46 LAIHQPESELDKMDDWCTNTHTNSGLVERIRNSSVTEQEAIRQTIEFLEQWVPKGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|312795486|ref|YP_004028408.1| oligoribonuclease [Burkholderia rhizoxinica HKI 454]
gi|312167261|emb|CBW74264.1| Oligoribonuclease (EC 3.1.-.-) [Burkholderia rhizoxinica HKI 454]
Length = 204
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ L M++W H SGL +RVRASSV+ +A +L F+++YV +PM G
Sbjct: 60 AIHQSDSTLDAMDQWNKNTHGRSGLIERVRASSVTEADAAAQLLAFLSQYVPAGKSPMCG 119
>gi|241759454|ref|ZP_04757558.1| oligoribonuclease Orn [Neisseria flavescens SK114]
gi|241320236|gb|EER56569.1| oligoribonuclease Orn [Neisseria flavescens SK114]
Length = 185
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+EW H +GLT RVR S ++ E ++ L F++ ++ K+ PM G
Sbjct: 48 IHQSDELLNGMDEWNTTTHGRTGLTQRVRESKLTEAEVEQNLLGFMSAWIPEKSTPMCG 106
>gi|323498389|ref|ZP_08103386.1| oligoribonuclease [Vibrio sinaloensis DSM 21326]
gi|323316531|gb|EGA69545.1| oligoribonuclease [Vibrio sinaloensis DSM 21326]
Length = 181
Score = 47.0 bits (110), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 32/52 (61%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M+EWC H SGL RV+AS V+ ++A ++ +F+ K+V +P+ G
Sbjct: 55 LAKMDEWCTTTHTGSGLVARVKASQVTEQDAIRQTIEFLEKWVPKGKSPICG 106
>gi|336125368|ref|YP_004567416.1| Oligoribonuclease [Vibrio anguillarum 775]
gi|365539370|ref|ZP_09364545.1| oligoribonuclease [Vibrio ordalii ATCC 33509]
gi|335343091|gb|AEH34374.1| Oligoribonuclease [Vibrio anguillarum 775]
Length = 181
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E L M+EWC H SGL +RVR SV+ +EA ++ F+ K+V +P+ G
Sbjct: 47 AVHQSEAELAKMDEWCTTTHTKSGLVERVRHDSVTQQEAVEQTITFLEKWVPKGKSPICG 106
>gi|50310933|ref|XP_455489.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49644625|emb|CAG98197.1| KLLA0F08998p [Kluyveromyces lactis]
Length = 306
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 17/50 (34%), Positives = 33/50 (66%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV 82
++Y++ ++ NMNEWC+ H SGLT +V S + E+ ++ L ++ K++
Sbjct: 106 IHYDKSIMDNMNEWCINQHGFSGLTQKVLDSVKTREQVEEELLNYIKKWI 155
>gi|359419542|ref|ZP_09211493.1| oligoribonuclease [Gordonia araii NBRC 100433]
gi|358244503|dbj|GAB09562.1| oligoribonuclease [Gordonia araii NBRC 100433]
Length = 199
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++ ++E L NM + + H ASGLT+ VRAS+V++ +A++++ ++ K+V P P+ G
Sbjct: 45 IHADDEALANMPDVVTKMHAASGLTEEVRASTVTLADAEEQVLAYIRKHVTSPGQVPLAG 104
>gi|317026983|ref|XP_003188586.1| RNA exonuclease Rex2 [Aspergillus niger CBS 513.88]
Length = 188
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 23 LQTQGTCKCGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV 82
L+ QG + +++ VL NMN WC+E H +GLT V+AS+ + EEA L ++ KYV
Sbjct: 42 LEPQGF-ETVIHHPTSVLDNMNAWCIETHGRTGLTAAVQASTTTAEEAATALLAYIQKYV 100
Query: 83 -KPKTAPMVG-EYHTSKELLKDSDHFLVFSW 111
+P+ + G H K L + V W
Sbjct: 101 PQPRRGLLAGNSVHADKAFLAKGPYQAVLDW 131
>gi|85058292|ref|YP_453994.1| oligoribonuclease [Sodalis glossinidius str. 'morsitans']
gi|123520179|sp|Q2NW86.1|ORN_SODGM RecName: Full=Oligoribonuclease
gi|84778812|dbj|BAE73589.1| putative oligoribonuclease [Sodalis glossinidius str. 'morsitans']
Length = 181
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+Y ++ L MN+W V H ASGL DRVR S++ E A + F+A +V +P+
Sbjct: 46 LAIYQSDAQLALMNDWNVRTHTASGLVDRVRQSALDEEAAVAQTLAFLADWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|388599183|ref|ZP_10157579.1| oligoribonuclease [Vibrio campbellii DS40M4]
Length = 181
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 34/55 (61%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
EE L M++WC H +SGL +RVR S VS ++A + +F+ ++V +P+ G
Sbjct: 52 EEELAKMDDWCTNTHTSSGLVERVRNSDVSEQDAVAQTIEFLEEWVPKGVSPICG 106
>gi|396491086|ref|XP_003843486.1| similar to oligoribonuclease [Leptosphaeria maculans JN3]
gi|312220065|emb|CBY00007.1| similar to oligoribonuclease [Leptosphaeria maculans JN3]
Length = 195
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 37/70 (52%), Gaps = 2/70 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG- 91
+++++E L M EWCV HH SGLT S+ + EEA + L ++ KYV + ++
Sbjct: 50 IHHSKEQLDRMGEWCVRHHGQSGLTQSCIDSTTTAEEAAEGLLSYIKKYVPERRTGLLSG 109
Query: 92 -EYHTSKELL 100
H K L
Sbjct: 110 NSVHADKSFL 119
>gi|83648050|ref|YP_436485.1| oligoribonuclease [Hahella chejuensis KCTC 2396]
gi|123531236|sp|Q2SBB4.1|ORN_HAHCH RecName: Full=Oligoribonuclease
gi|83636093|gb|ABC32060.1| Oligoribonuclease (3'->5' exoribonuclease) [Hahella chejuensis KCTC
2396]
Length = 182
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 35/55 (63%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ VL M++W H ASGLT RV+ S++ +A+K++ F+A++V +PM G
Sbjct: 51 DSVLALMDDWNRNTHGASGLTGRVKGSTIGEADAEKQILDFLAQHVDAGCSPMCG 105
>gi|424864455|ref|ZP_18288358.1| oligoribonuclease [SAR86 cluster bacterium SAR86B]
gi|400759201|gb|EJP73383.1| oligoribonuclease [SAR86 cluster bacterium SAR86B]
Length = 181
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 35/53 (66%)
Query: 39 VLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+L +M+EW H +SGL + V++S ++++ A+ +F++KYV K +PM G
Sbjct: 56 LLDSMDEWNKNQHGSSGLIEEVKSSIITMQMAEIETLEFISKYVGEKQSPMCG 108
>gi|397688547|ref|YP_006525866.1| oligoribonuclease [Pseudomonas stutzeri DSM 10701]
gi|395810103|gb|AFN79508.1| oligoribonuclease [Pseudomonas stutzeri DSM 10701]
Length = 180
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L M+EW H SGLT RVR S++ EA+ F+ ++V +P+
Sbjct: 45 IAVHQSDEILAGMDEWNTRQHGGSGLTQRVRESTILTAEAEALTLAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|379734738|ref|YP_005328244.1| oligoribonuclease [Blastococcus saxobsidens DD2]
gi|378782545|emb|CCG02211.1| Oligoribonuclease [Blastococcus saxobsidens DD2]
Length = 219
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 37/51 (72%), Gaps = 1/51 (1%)
Query: 42 NMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
M++ VE H SGLTD VRASS+++ EA+++L ++ ++V + +TAP+ G
Sbjct: 61 GMDDVVVEMHRKSGLTDAVRASSLTVAEAEQQLLAYIKRWVPERRTAPLCG 111
>gi|340520498|gb|EGR50734.1| predicted protein [Trichoderma reesei QM6a]
Length = 196
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 40/71 (56%), Gaps = 2/71 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
+++ + L M++WC H SGLT V AS + +A LH+++ ++V +P+TA + G
Sbjct: 46 IHWPKSRLDQMDDWCTNTHGKSGLTAAVIASDTTPTQAADALHRYITRFVPRPRTALLAG 105
Query: 92 -EYHTSKELLK 101
H + L+
Sbjct: 106 NSVHADRAFLR 116
>gi|395761436|ref|ZP_10442105.1| oligoribonuclease [Janthinobacterium lividum PAMC 25724]
Length = 176
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/59 (37%), Positives = 35/59 (59%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M+ W H SGL D+V+AS+V+ +A+ L F+ KYV +PM G
Sbjct: 43 IHQSDETLNKMDAWNKGTHGRSGLIDKVKASTVTEAQAEAELIAFLKKYVPAGKSPMCG 101
>gi|417844047|ref|ZP_12490110.1| Oligoribonuclease [Haemophilus haemolyticus M21127]
gi|341947999|gb|EGT74638.1| Oligoribonuclease [Haemophilus haemolyticus M21127]
Length = 182
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 39/61 (63%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L MN+WC + H+ +GL +RV+AS ++ A+ + F+ K+V ++P+
Sbjct: 46 LAVHQSDELLNKMNDWCQKTHSENGLIERVKASKLTERAAELQTLDFLKKWVPKGSSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|126666943|ref|ZP_01737919.1| oligoribonuclease [Marinobacter sp. ELB17]
gi|126628659|gb|EAZ99280.1| oligoribonuclease [Marinobacter sp. ELB17]
Length = 180
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++ ++ M+EWC H SGLT RV S +S EA+++ F+ ++++P +P+
Sbjct: 45 LAVHQSDTLMGAMDEWCTRTHGESGLTQRVTDSRISEAEAEQQTLAFLREHLEPGDSPLC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|421617065|ref|ZP_16058063.1| oligoribonuclease [Pseudomonas stutzeri KOS6]
gi|409780982|gb|EKN60591.1| oligoribonuclease [Pseudomonas stutzeri KOS6]
Length = 180
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT RVR S +S EA++ F+ ++V +P+
Sbjct: 45 IAVHQSDETLARMDEWNTRQHGGSGLTQRVRDSLISTAEAEQLTLAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|451996793|gb|EMD89259.1| hypothetical protein COCHEDRAFT_1196173 [Cochliobolus
heterostrophus C5]
Length = 197
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 44/79 (55%), Gaps = 3/79 (3%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
+++++E L M EWC HH SGLT S+ + EEA + L ++ KYV + +TA + G
Sbjct: 50 IHHDKEQLDRMGEWCTSHHGDSGLTQACIDSTTTAEEAAEGLLNYIKKYVPERRTALLAG 109
Query: 92 -EYHTSKE-LLKDSDHFLV 108
H K L+K H +V
Sbjct: 110 NSVHADKGFLVKQPYHIVV 128
>gi|425065764|ref|ZP_18468884.1| 3'-to-5' oligoribonuclease (orn) [Pasteurella multocida subsp.
gallicida P1059]
gi|404384140|gb|EJZ80585.1| 3'-to-5' oligoribonuclease (orn) [Pasteurella multocida subsp.
gallicida P1059]
Length = 184
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L MN+WC++ H +GL +RV+ S ++ EA+ + F+ K+V +P+ G
Sbjct: 47 AIHQSDECLAKMNDWCMKTHTENGLVERVKNSRLTEREAELQTLDFLKKWVPKGVSPICG 106
>gi|170050189|ref|XP_001859612.1| oligoribonuclease [Culex quinquefasciatus]
gi|167871717|gb|EDS35100.1| oligoribonuclease [Culex quinquefasciatus]
Length = 214
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 34/54 (62%)
Query: 38 EVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++++ MNEWC +H +GLT V S V++ EA++++ FV ++ K P+ G
Sbjct: 83 QIMEAMNEWCKVNHAKTGLTQAVADSKVTLAEAEQQVLDFVKRHCPEKACPLAG 136
>gi|403368109|gb|EJY83886.1| Oligoribonuclease [Oxytricha trifallax]
Length = 206
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 44/68 (64%), Gaps = 2/68 (2%)
Query: 36 NEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKY-VKPKTAPMVGE-Y 93
+E LQ+M++W HH SGL +VR S+VS+E+A++ + F+ + V ++AP+ G
Sbjct: 71 DEYTLQHMDDWNQTHHKESGLLAQVRQSNVSLEQAEQIILAFLQEMQVTYQSAPLAGNCI 130
Query: 94 HTSKELLK 101
HT ++ ++
Sbjct: 131 HTDRKFMR 138
>gi|145633650|ref|ZP_01789377.1| oligoribonuclease [Haemophilus influenzae 3655]
gi|145635428|ref|ZP_01791129.1| oligoribonuclease [Haemophilus influenzae PittAA]
gi|229845250|ref|ZP_04465383.1| oligoribonuclease [Haemophilus influenzae 6P18H1]
gi|144985527|gb|EDJ92343.1| oligoribonuclease [Haemophilus influenzae 3655]
gi|145267302|gb|EDK07305.1| oligoribonuclease [Haemophilus influenzae PittAA]
gi|229811845|gb|EEP47541.1| oligoribonuclease [Haemophilus influenzae 6P18H1]
Length = 182
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 39/61 (63%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L MN+WC + H+ +GL +RV+AS ++ A+ + F+ K+V ++P+
Sbjct: 46 LAVHQSDELLNKMNDWCQKTHSENGLIERVKASKLTERAAELQTLDFLKKWVPKGSSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|429085068|ref|ZP_19148052.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter condimenti 1330]
gi|426545908|emb|CCJ74093.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter condimenti 1330]
Length = 181
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL DRV+AS++ EA++ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLALMDDWNVRTHTASGLVDRVKASTMGEHEAERATIEFLKEWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|404379009|ref|ZP_10984082.1| oligoribonuclease [Simonsiella muelleri ATCC 29453]
gi|404294852|gb|EFG29973.2| oligoribonuclease [Simonsiella muelleri ATCC 29453]
Length = 173
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L NM++W + H +GL +RV++S+ + + + L QF+ ++ K PM G
Sbjct: 35 AIHQSDEILNNMDKWNTDTHTRTGLVERVKSSTYTETQVETELLQFMQTWLPEKATPMCG 94
>gi|418460912|ref|ZP_13031996.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
azurea SZMC 14600]
gi|359739008|gb|EHK87884.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
azurea SZMC 14600]
Length = 191
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ +++ L NM + + H SGLT+ VR S+++IEEA++R ++ ++V P++AP+ G
Sbjct: 34 IHADDDALANMPDVVRDMHARSGLTEEVRRSTMTIEEAEQRALAYIREHVPDPQSAPLAG 93
>gi|359782189|ref|ZP_09285411.1| oligoribonuclease [Pseudomonas psychrotolerans L19]
gi|359369982|gb|EHK70551.1| oligoribonuclease [Pseudomonas psychrotolerans L19]
Length = 182
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+EW H SGLT RVR S++ +A+ F+ ++V +P+ G
Sbjct: 48 AIHQSDEILAGMDEWNTRQHGGSGLTQRVRESTIDTAQAEALTLDFLRQWVPKGKSPICG 107
>gi|378697955|ref|YP_005179913.1| oligoribonuclease [Haemophilus influenzae 10810]
gi|301170471|emb|CBW30078.1| oligoribonuclease [Haemophilus influenzae 10810]
Length = 182
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 39/61 (63%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L MN+WC + H+ +GL +RV+AS ++ A+ + F+ K+V ++P+
Sbjct: 46 LAVHQSDELLNKMNDWCQKTHSENGLIERVKASKLTERAAELQTLDFLKKWVPKGSSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|429090494|ref|ZP_19153212.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter dublinensis 1210]
gi|426745038|emb|CCJ79325.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter dublinensis 1210]
Length = 181
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL DRV+AS++ EA++ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLALMDDWNVRTHTASGLVDRVKASTMDEHEAERATIEFLKEWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|119776164|ref|YP_928904.1| oligoribonuclease [Shewanella amazonensis SB2B]
gi|166216584|sp|A1SA28.1|ORN_SHEAM RecName: Full=Oligoribonuclease
gi|119768664|gb|ABM01235.1| oligoribonuclease [Shewanella amazonensis SB2B]
Length = 181
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++EVL M++W +HH ASGL +RVR+S + +A + F++ +V +PM
Sbjct: 46 IAIHQSDEVLAAMDDWNQQHHGASGLIERVRSSQYTEADAIAQTIDFLSLHVPKGVSPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|342904959|ref|ZP_08726754.1| Oligoribonuclease [Haemophilus haemolyticus M21621]
gi|341952195|gb|EGT78731.1| Oligoribonuclease [Haemophilus haemolyticus M21621]
Length = 182
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L MN+WC + H+ +GL +RV+AS ++ A+ + F+ K+V +P+
Sbjct: 46 LAVHQSDELLNKMNDWCQKTHSENGLIERVKASKLTERAAELQTLDFLKKWVPKDASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|133910502|emb|CAM00615.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharopolyspora
erythraea NRRL 2338]
Length = 210
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKP-KTAPMVG 91
++ ++EVL M + E H SGLT+ VR S+V++ EA++R+ ++ ++V ++AP+ G
Sbjct: 34 IHADDEVLAGMPDVVREMHERSGLTEEVRRSTVTLAEAEQRILDYIRRHVPDGRSAPLAG 93
>gi|345876303|ref|ZP_08828077.1| oligoribonuclease [Neisseria weaveri LMG 5135]
gi|417957599|ref|ZP_12600519.1| oligoribonuclease [Neisseria weaveri ATCC 51223]
gi|343966908|gb|EGV35160.1| oligoribonuclease [Neisseria weaveri LMG 5135]
gi|343967932|gb|EGV36170.1| oligoribonuclease [Neisseria weaveri ATCC 51223]
Length = 201
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++EVL M+EW H +GLT RVR S + + +++L F+A+++ + PM G
Sbjct: 62 AIHQSDEVLNAMDEWNTATHGRTGLTRRVRDSVYTEADVEQKLLAFMAQWIPERATPMCG 121
>gi|344345316|ref|ZP_08776170.1| Oligoribonuclease [Marichromatium purpuratum 984]
gi|343803145|gb|EGV21057.1| Oligoribonuclease [Marichromatium purpuratum 984]
Length = 182
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E L M+EW EHH ASGL +RVR S+ A++ +F+A V +P+ G
Sbjct: 47 AIHQSEAQLAGMDEWNREHHGASGLIERVRLSAQDEAAAERATLEFLADLVPAGASPLCG 106
>gi|398803671|ref|ZP_10562689.1| oligoribonuclease (3'->5' exoribonuclease) [Polaromonas sp. CF318]
gi|398095924|gb|EJL86255.1| oligoribonuclease (3'->5' exoribonuclease) [Polaromonas sp. CF318]
Length = 187
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +E+L M+ W H SGL D+V+AS+V +A+ ++ F+A+YV ++P+
Sbjct: 53 LAIHQTDELLDQMDAWNKGTHGRSGLIDKVKASTVDEADAEAQILAFLAQYVPKGSSPLC 112
Query: 91 G 91
G
Sbjct: 113 G 113
>gi|358057032|dbj|GAA96939.1| hypothetical protein E5Q_03613 [Mixia osmundae IAM 14324]
Length = 239
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/46 (41%), Positives = 31/46 (67%)
Query: 36 NEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKY 81
++ VL M+EWC + H+ +GLT AS SIEE D+++ ++V +Y
Sbjct: 99 DKSVLDQMDEWCTKTHSGTGLTQACIASKHSIEEVDRKVTEYVKRY 144
>gi|339056134|ref|ZP_08648670.1| 3'-to-5' oligoribonuclease (orn) [gamma proteobacterium IMCC2047]
gi|330720662|gb|EGG98910.1| 3'-to-5' oligoribonuclease (orn) [gamma proteobacterium IMCC2047]
Length = 182
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + E + M+EW H SGLT RV S VS+E+A+ ++ +YV+ +PM G
Sbjct: 46 AIHQSAETMAGMDEWNTNQHGGSGLTQRVLDSDVSMEQAEAETIAWLEQYVEAGKSPMCG 105
>gi|417844795|ref|ZP_12490834.1| Oligoribonuclease [Haemophilus haemolyticus M21639]
gi|341956275|gb|EGT82705.1| Oligoribonuclease [Haemophilus haemolyticus M21639]
Length = 182
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 39/61 (63%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L MN+WC + H+ +GL +RV+AS ++ A+ + F+ K++ ++P+
Sbjct: 46 LAVHQSDELLNKMNDWCQKTHSENGLIERVKASKLTERAAELQTLDFLKKWIPKGSSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|77359452|ref|YP_339027.1| oligoribonuclease [Pseudoalteromonas haloplanktis TAC125]
gi|123587965|sp|Q3IG97.1|ORN_PSEHT RecName: Full=Oligoribonuclease
gi|76874363|emb|CAI85584.1| oligoribonuclease [Pseudoalteromonas haloplanktis TAC125]
Length = 181
Score = 46.6 bits (109), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + E+L NM+EWC H SGLT R +AS+ A ++ F+ ++V +PM G
Sbjct: 47 AIHQSNELLDNMDEWCTTQHGKSGLTARCKASTYDEAYAVEQTIAFLKQWVPAGASPMCG 106
>gi|68466641|ref|XP_722516.1| hypothetical protein CaO19.1466 [Candida albicans SC5314]
gi|68466924|ref|XP_722377.1| hypothetical protein CaO19.9041 [Candida albicans SC5314]
gi|46444347|gb|EAL03622.1| hypothetical protein CaO19.9041 [Candida albicans SC5314]
gi|46444495|gb|EAL03769.1| hypothetical protein CaO19.1466 [Candida albicans SC5314]
Length = 255
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRAS-SVSIEEADKRLHQFVAKYV-KPKTAPMV 90
+YY + L MNEWC+E H SGLTD++ A+ + + L +++ KYV + +T +
Sbjct: 89 IYYPKSRLDKMNEWCIETHGKSGLTDKILANPDRKLSVVEDELLEYIKKYVPEVRTGLLA 148
Query: 91 G------EYHTSKELLKDSDHF 106
G + KE K DH
Sbjct: 149 GNSVYMDRFFMMKEFPKVIDHL 170
>gi|381162705|ref|ZP_09871935.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
azurea NA-128]
gi|379254610|gb|EHY88536.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
azurea NA-128]
Length = 202
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ +++ L NM + + H SGLT+ VR S+++IEEA++R ++ ++V P++AP+ G
Sbjct: 45 IHADDDALANMPDVVRDMHARSGLTEEVRRSTMTIEEAEQRALAYIREHVPDPQSAPLAG 104
>gi|187477876|ref|YP_785900.1| oligoribonuclease [Bordetella avium 197N]
gi|123515337|sp|Q2L2P5.1|ORN_BORA1 RecName: Full=Oligoribonuclease
gi|115422462|emb|CAJ48987.1| oligoribonuclease [Bordetella avium 197N]
Length = 181
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 39/59 (66%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ VL+ M+ W H SGL D+VRAS+++ +A+++L F+++YV +P+ G
Sbjct: 48 VHQSDSVLEAMDNWNKSTHGKSGLIDKVRASTLTEAQAEQQLIDFLSQYVPAGKSPLCG 106
>gi|320586054|gb|EFW98733.1| RNA exonuclease [Grosmannia clavigera kw1407]
Length = 205
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/62 (38%), Positives = 35/62 (56%), Gaps = 2/62 (3%)
Query: 42 NMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFV-AKYVKPKTAPMVG-EYHTSKEL 99
M+ WC +HH ASGLT+ V AS++S E A L +V A+ P+ A + G H +
Sbjct: 62 RMDAWCTDHHGASGLTEAVLASTISPEAAAAGLLAYVRARVPTPRVALLAGNSVHADRAF 121
Query: 100 LK 101
L+
Sbjct: 122 LR 123
>gi|284990013|ref|YP_003408567.1| Exonuclease RNase T and DNA polymerase III [Geodermatophilus
obscurus DSM 43160]
gi|284063258|gb|ADB74196.1| Exonuclease RNase T and DNA polymerase III [Geodermatophilus
obscurus DSM 43160]
Length = 225
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 39/57 (68%), Gaps = 1/57 (1%)
Query: 36 NEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++ L+ M E E H SGLT+ VRAS++++ EA+++L +V ++V + +TAP+ G
Sbjct: 51 DDAALEGMVEVVTEMHAKSGLTEAVRASTLTVAEAEQQLLAYVKRFVPERRTAPLCG 107
>gi|94500535|ref|ZP_01307066.1| oligoribonuclease [Bermanella marisrubri]
gi|94427325|gb|EAT12304.1| oligoribonuclease [Bermanella marisrubri]
Length = 185
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ + ++ NM+EW H SGLT RV+ S + +EA K+ F+ +YV +PM
Sbjct: 50 LAIHQPDSLMNNMDEWNTRTHGNSGLTKRVKESDIDEQEAVKQTIAFLQQYVGKGVSPMC 109
Query: 91 G 91
G
Sbjct: 110 G 110
>gi|41408418|ref|NP_961254.1| oligoribonuclease [Mycobacterium avium subsp. paratuberculosis
K-10]
gi|417747408|ref|ZP_12395877.1| oligoribonuclease (3'->5' exoribonuclease) [Mycobacterium avium
subsp. paratuberculosis S397]
gi|440776398|ref|ZP_20955244.1| oligoribonuclease [Mycobacterium avium subsp. paratuberculosis S5]
gi|48428193|sp|P61651.1|ORN_MYCPA RecName: Full=Oligoribonuclease
gi|41396774|gb|AAS04637.1| hypothetical protein MAP_2320 [Mycobacterium avium subsp.
paratuberculosis K-10]
gi|336460994|gb|EGO39874.1| oligoribonuclease (3'->5' exoribonuclease) [Mycobacterium avium
subsp. paratuberculosis S397]
gi|436723565|gb|ELP47373.1| oligoribonuclease [Mycobacterium avium subsp. paratuberculosis S5]
Length = 215
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++ L M E E H+ SGL D V+AS+V + A++ + ++ +VK PKTAP+ G
Sbjct: 45 IHADDAALAAMGEVVTEMHSRSGLIDEVKASTVDLATAEEMVLDYIRTHVKAPKTAPLAG 104
>gi|295671152|ref|XP_002796123.1| phosphoglucomutase [Paracoccidioides sp. 'lutzii' Pb01]
gi|226284256|gb|EEH39822.1| phosphoglucomutase [Paracoccidioides sp. 'lutzii' Pb01]
Length = 762
Score = 46.2 bits (108), Expect = 0.002, Method: Composition-based stats.
Identities = 20/53 (37%), Positives = 33/53 (62%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK 85
++Y + VL NMN+WC+E H +GLT V +S+ + A + L ++ K+V K
Sbjct: 16 IHYPKSVLDNMNDWCIETHGRTGLTAAVLSSTTTPTAAAEGLLAYIKKHVPQK 68
>gi|118464888|ref|YP_880896.1| oligoribonuclease [Mycobacterium avium 104]
gi|254774490|ref|ZP_05216006.1| oligoribonuclease [Mycobacterium avium subsp. avium ATCC 25291]
gi|166216267|sp|A0QDA8.1|ORN_MYCA1 RecName: Full=Oligoribonuclease
gi|118166175|gb|ABK67072.1| oligoribonuclease [Mycobacterium avium 104]
Length = 215
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++ L M E E H+ SGL D V+AS+V + A++ + ++ +VK PKTAP+ G
Sbjct: 45 IHADDAALAAMGEVVTEMHSRSGLIDEVKASTVDLATAEEMVLDYIRTHVKAPKTAPLAG 104
>gi|394987815|ref|ZP_10380654.1| exonuclease RNase T and DNA polymerase III [Sulfuricella
denitrificans skB26]
gi|393793034|dbj|GAB70293.1| exonuclease RNase T and DNA polymerase III [Sulfuricella
denitrificans skB26]
Length = 182
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/56 (37%), Positives = 33/56 (58%)
Query: 36 NEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++EVL M+ W H SGL D+V+AS + + +L +F+ +YV K +PM G
Sbjct: 51 SDEVLNGMDAWNTATHGKSGLIDKVKASKLDDAAVEAQLIEFLKEYVPGKKSPMCG 106
>gi|145629185|ref|ZP_01784984.1| oligoribonuclease [Haemophilus influenzae 22.1-21]
gi|145639128|ref|ZP_01794735.1| oligoribonuclease [Haemophilus influenzae PittII]
gi|148827138|ref|YP_001291891.1| oligoribonuclease [Haemophilus influenzae PittGG]
gi|166216262|sp|A5UFF2.1|ORN_HAEIG RecName: Full=Oligoribonuclease
gi|144978688|gb|EDJ88411.1| oligoribonuclease [Haemophilus influenzae 22.1-21]
gi|145271690|gb|EDK11600.1| oligoribonuclease [Haemophilus influenzae PittII]
gi|148718380|gb|ABQ99507.1| oligoribonuclease [Haemophilus influenzae PittGG]
gi|309750709|gb|ADO80693.1| Oligoribonuclease [Haemophilus influenzae R2866]
Length = 182
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L MN+WC + H+ +GL +RV+AS ++ A+ + F+ K+V +P+
Sbjct: 46 LAVHQSDELLNKMNDWCQKTHSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|388259154|ref|ZP_10136328.1| oligoribonuclease [Cellvibrio sp. BR]
gi|387937112|gb|EIK43669.1| oligoribonuclease [Cellvibrio sp. BR]
Length = 203
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + ++ +M+EW H SGL RVR S +SIE+A+ +F+ ++V +P+ G
Sbjct: 68 AIHQPDSIMLSMDEWNTNQHGKSGLAQRVRESQISIEQAEAETIKFLEQWVPKGKSPICG 127
>gi|260582817|ref|ZP_05850603.1| oligoribonuclease [Haemophilus influenzae NT127]
gi|260094143|gb|EEW78045.1| oligoribonuclease [Haemophilus influenzae NT127]
Length = 182
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L MN+WC + H+ +GL +RV+AS ++ A+ + F+ K+V +P+
Sbjct: 46 LAVHQSDELLNKMNDWCQKTHSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|333982375|ref|YP_004511585.1| oligoribonuclease [Methylomonas methanica MC09]
gi|333806416|gb|AEF99085.1| Oligoribonuclease [Methylomonas methanica MC09]
Length = 181
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ L M++W HH SGL RV+ S++S A+ +F+A ++ PK +P+ G
Sbjct: 47 AVHQSDAALAAMDDWNQRHHGQSGLIQRVKESNISAANAESLTLEFLANWLPPKASPICG 106
>gi|37528414|ref|NP_931759.1| oligoribonuclease [Photorhabdus luminescens subsp. laumondii TTO1]
gi|41017433|sp|Q7MYS8.1|ORN_PHOLL RecName: Full=Oligoribonuclease
gi|36787852|emb|CAE16967.1| oligoribonuclease [Photorhabdus luminescens subsp. laumondii TTO1]
Length = 181
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H SGL +RV+AS + EA+K +F+ K+V +P+
Sbjct: 46 IAVHQSDEQLALMDKWNVRTHTGSGLVERVKASKIDDREAEKATIEFLEKWVPAGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|242014597|ref|XP_002427973.1| oligoribonuclease, putative [Pediculus humanus corporis]
gi|212512472|gb|EEB15235.1| oligoribonuclease, putative [Pediculus humanus corporis]
Length = 196
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 32/46 (69%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFV 78
++ N+ VL++MNEWC+ HH SGL RAS S+++ +++L ++
Sbjct: 63 IHQNDNVLKSMNEWCLVHHEKSGLISESRASPHSLKDVEEKLFNYI 108
>gi|418295286|ref|ZP_12907150.1| oligoribonuclease [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
gi|379066633|gb|EHY79376.1| oligoribonuclease [Pseudomonas stutzeri ATCC 14405 = CCUG 16156]
Length = 180
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W H SGLT RVR S +S EA++ F+ ++V +P+
Sbjct: 45 IAVHQSDETLARMDDWNTRQHGGSGLTQRVRESRISTAEAEQLTLAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|241950803|ref|XP_002418124.1| Oligoribonuclease, mitochondrial precursor, putative; exonuclease,
putative [Candida dubliniensis CD36]
gi|223641463|emb|CAX43424.1| Oligoribonuclease, mitochondrial precursor, putative [Candida
dubliniensis CD36]
Length = 257
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRAS-SVSIEEADKRLHQFVAKYV-KPKTAPMV 90
+YY + L MNEWC+E H SGLT+++ A+ + + L Q++ KYV + +T +
Sbjct: 91 IYYPKSRLDKMNEWCIETHGKSGLTEKILANPDRKLSAVEDELLQYIKKYVPEIRTGLLA 150
Query: 91 G------EYHTSKELLKDSDHF 106
G + KE K DH
Sbjct: 151 GNSVHMDRFFMMKEFPKVIDHL 172
>gi|319896797|ref|YP_004134991.1| oligoribonuclease [Haemophilus influenzae F3031]
gi|317432300|emb|CBY80653.1| oligoribonuclease [Haemophilus influenzae F3031]
Length = 182
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L MN+WC + H+ +GL +RV+AS ++ A+ + F+ K+V +P+
Sbjct: 46 LAVHQSDELLNKMNDWCQKTHSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|294139250|ref|YP_003555228.1| oligoribonuclease [Shewanella violacea DSS12]
gi|293325719|dbj|BAJ00450.1| oligoribonuclease [Shewanella violacea DSS12]
Length = 181
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +E L M++W +HH SGL +RVR+S + ++A +F+++YV +PM
Sbjct: 46 IAIHQTDEQLATMDDWNQKHHGESGLVERVRSSQYNEDDAIAMTIKFISQYVPQGVSPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|229780998|ref|YP_001103540.2| oligoribonuclease [Saccharopolyspora erythraea NRRL 2338]
gi|291007403|ref|ZP_06565376.1| oligoribonuclease [Saccharopolyspora erythraea NRRL 2338]
Length = 221
Score = 46.2 bits (108), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKP-KTAPMVG 91
++ ++EVL M + E H SGLT+ VR S+V++ EA++R+ ++ ++V ++AP+ G
Sbjct: 45 IHADDEVLAGMPDVVREMHERSGLTEEVRRSTVTLAEAEQRILDYIRRHVPDGRSAPLAG 104
>gi|68250317|ref|YP_249429.1| oligoribonuclease [Haemophilus influenzae 86-028NP]
gi|148825742|ref|YP_001290495.1| oligoribonuclease [Haemophilus influenzae PittEE]
gi|373468043|ref|ZP_09559327.1| oligoribonuclease [Haemophilus sp. oral taxon 851 str. F0397]
gi|81335262|sp|Q4QJM8.1|ORN_HAEI8 RecName: Full=Oligoribonuclease
gi|166216261|sp|A5UBG1.1|ORN_HAEIE RecName: Full=Oligoribonuclease
gi|68058516|gb|AAX88769.1| oligoribonuclease [Haemophilus influenzae 86-028NP]
gi|148715902|gb|ABQ98112.1| oligoribonuclease [Haemophilus influenzae PittEE]
gi|371756885|gb|EHO45688.1| oligoribonuclease [Haemophilus sp. oral taxon 851 str. F0397]
Length = 182
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L MN+WC + H+ +GL +RV+AS ++ A+ + F+ K+V +P+
Sbjct: 46 LAVHQSDELLNKMNDWCQKTHSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|145637656|ref|ZP_01793311.1| oligoribonuclease [Haemophilus influenzae PittHH]
gi|145269179|gb|EDK09127.1| oligoribonuclease [Haemophilus influenzae PittHH]
Length = 182
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L MN+WC + H+ +GL +RV+AS ++ A+ + F+ K+V +P+
Sbjct: 46 LAVHQSDELLNKMNDWCQKTHSENGLIERVKASKLTERAAELQTLDFLKKWVPKGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|350553871|ref|ZP_08923026.1| Oligoribonuclease [Thiorhodospira sibirica ATCC 700588]
gi|349789581|gb|EGZ43528.1| Oligoribonuclease [Thiorhodospira sibirica ATCC 700588]
Length = 181
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E +L M++W H SGL +RV+ S +A++ +F+ +YV PKT+PM G
Sbjct: 47 AVHQSEHILARMDDWNRTTHTRSGLVERVKFSLHDEVQAEQETMKFLRQYVPPKTSPMCG 106
>gi|451812270|ref|YP_007448724.1| oligoribonuclease [Candidatus Kinetoplastibacterium galatii TCC219]
gi|451778172|gb|AGF49120.1| oligoribonuclease [Candidatus Kinetoplastibacterium galatii TCC219]
Length = 181
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ E+L++M++W H SGL +RV +S +S +EA+ + F+ Y+ P +P+
Sbjct: 46 IAIHQTNELLESMDKWNKSVHGKSGLINRVLSSDISEKEAEDSILLFLKNYISPDKSPLC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|410086320|ref|ZP_11283032.1| 3'-to-5' oligoribonuclease (orn) [Morganella morganii SC01]
gi|421491524|ref|ZP_15938887.1| ORN [Morganella morganii subsp. morganii KT]
gi|455737374|ref|YP_007503640.1| 3'-to-5' oligoribonuclease (orn) [Morganella morganii subsp.
morganii KT]
gi|400193958|gb|EJO27091.1| ORN [Morganella morganii subsp. morganii KT]
gi|409767165|gb|EKN51245.1| 3'-to-5' oligoribonuclease (orn) [Morganella morganii SC01]
gi|455418937|gb|AGG29267.1| 3'-to-5' oligoribonuclease (orn) [Morganella morganii subsp.
morganii KT]
Length = 181
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGLT+RVRAS+ S +A++ F+ ++V +P+
Sbjct: 46 LAVHQSDEQLGLMDDWNVRTHGASGLTERVRASTYSDAQAEQATIAFLEQWVPQGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|429730197|ref|ZP_19264848.1| oligoribonuclease [Corynebacterium durum F0235]
gi|429148257|gb|EKX91268.1| oligoribonuclease [Corynebacterium durum F0235]
Length = 213
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK-TAPMVG 91
++ EE L MNE + H +SGLT+ +R S+ +IE+A++ + +A++ P AP+ G
Sbjct: 53 VHATEEQLAGMNELVADMHGSSGLTEAIRTSTTTIEQAEQAVLDLIAEHCDPDHPAPLAG 112
>gi|429098084|ref|ZP_19160190.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter dublinensis 582]
gi|426284424|emb|CCJ86303.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter dublinensis 582]
Length = 181
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW V H ASGL DRV+AS++ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLALMDEWNVRTHTASGLVDRVKASTMGEHEAELATIEFLKEWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|170728503|ref|YP_001762529.1| oligoribonuclease [Shewanella woodyi ATCC 51908]
gi|169813850|gb|ACA88434.1| Exonuclease RNase T and DNA polymerase III [Shewanella woodyi ATCC
51908]
Length = 181
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W +HH SGL DRVR+S S +A +F++++V ++PM
Sbjct: 46 IAIHQSDEQLAKMDDWNKKHHGESGLVDRVRSSQYSEAQAVAMTIEFLSQHVTKGSSPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|399019634|ref|ZP_10721780.1| oligoribonuclease (3'->5' exoribonuclease) [Herbaspirillum sp.
CF444]
gi|398097525|gb|EJL87829.1| oligoribonuclease (3'->5' exoribonuclease) [Herbaspirillum sp.
CF444]
Length = 201
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E+L M+ W H SGL +RV+AS+V+ EEA L F+ +V +PM G
Sbjct: 67 AIHQPDEILDGMDAWNKGTHGRSGLIERVKASTVTEEEASAALIAFLKPFVPVGKSPMCG 126
>gi|359445010|ref|ZP_09234769.1| oligoribonuclease [Pseudoalteromonas sp. BSi20439]
gi|358041139|dbj|GAA71018.1| oligoribonuclease [Pseudoalteromonas sp. BSi20439]
Length = 181
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+EWC H SGLT R +AS+ + A ++ F+ ++V +PM G
Sbjct: 47 AIHQSDELLDGMDEWCTTQHGKSGLTARCKASTFNEAYAVEQTLAFLKQWVPAGASPMCG 106
>gi|402567198|ref|YP_006616543.1| oligoribonuclease [Burkholderia cepacia GG4]
gi|402248395|gb|AFQ48849.1| oligoribonuclease [Burkholderia cepacia GG4]
Length = 206
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRVRAS+V+ E A +L F+A+YV P +PM G
Sbjct: 59 AIHQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEEAAAAQLQAFLAQYVSPGKSPMCG 118
>gi|419952833|ref|ZP_14468979.1| oligoribonuclease [Pseudomonas stutzeri TS44]
gi|387970109|gb|EIK54388.1| oligoribonuclease [Pseudomonas stutzeri TS44]
Length = 180
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++ VL M+EW H SGLT RVR S + EA+ + F+ ++V +P+
Sbjct: 45 IAVHQSDAVLARMDEWNTRQHGGSGLTQRVRESRIGTAEAEAQTLAFLQQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|357021874|ref|ZP_09084105.1| oligoribonuclease [Mycobacterium thermoresistibile ATCC 19527]
gi|356479622|gb|EHI12759.1| oligoribonuclease [Mycobacterium thermoresistibile ATCC 19527]
Length = 215
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++E L NM E H SGL D VRAS++ + A++ + +V +VK KTAP+ G
Sbjct: 45 IHTDDEALDNMIPVVTEMHTRSGLIDEVRASTIDLATAEEMVLDYVRSHVKQAKTAPLAG 104
>gi|343505862|ref|ZP_08743405.1| oligoribonuclease [Vibrio ichthyoenteri ATCC 700023]
gi|342805550|gb|EGU40808.1| oligoribonuclease [Vibrio ichthyoenteri ATCC 700023]
Length = 181
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ E L+ M++WC H SGL +R+R SSV +EA ++ F+ ++V +P+
Sbjct: 46 LAIHQPESELEKMDDWCTNTHTNSGLVERIRNSSVDEQEAIRQTIAFLEQWVPKGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|255719107|ref|XP_002555834.1| KLTH0G18590p [Lachancea thermotolerans]
gi|238937218|emb|CAR25397.1| KLTH0G18590p [Lachancea thermotolerans CBS 6340]
Length = 323
Score = 46.2 bits (108), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/50 (32%), Positives = 35/50 (70%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV 82
++ +++++ MNEWC++HH +SGLT +V S+ + + ++ L ++ KY+
Sbjct: 117 IHCDKKIMDAMNEWCIDHHGSSGLTQKVLDSTKTTGQVEEELLAYLRKYI 166
>gi|317507722|ref|ZP_07965427.1| exonuclease [Segniliparus rugosus ATCC BAA-974]
gi|316253975|gb|EFV13340.1| exonuclease [Segniliparus rugosus ATCC BAA-974]
Length = 202
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVA-KYVKPKTAPMVG 91
++ +E+ L M+E+ H +SGLTD VRA+++S+ EA+ ++ +V ++ P+TA + G
Sbjct: 48 IHASEDKLAQMDEYVTNMHASSGLTDAVRAATLSLAEAEAKVLAYVKERFPAPRTAILAG 107
>gi|238881963|gb|EEQ45601.1| oligoribonuclease, mitochondrial precursor [Candida albicans WO-1]
Length = 237
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/82 (32%), Positives = 42/82 (51%), Gaps = 8/82 (9%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRAS-SVSIEEADKRLHQFVAKYV-KPKTAPMV 90
+YY + L MNEWC+E H SGLTD++ A+ + + L +++ KYV + +T +
Sbjct: 71 IYYPKSRLDKMNEWCIETHGKSGLTDKILANPDRKLSVVEDELLEYIKKYVPEVRTGLLA 130
Query: 91 G------EYHTSKELLKDSDHF 106
G + KE K DH
Sbjct: 131 GNSVHMDRFFMMKEFPKVIDHL 152
>gi|383830770|ref|ZP_09985859.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
xinjiangensis XJ-54]
gi|383463423|gb|EID55513.1| oligoribonuclease (3'->5' exoribonuclease) [Saccharomonospora
xinjiangensis XJ-54]
Length = 202
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++E L NM + E H SGLT+ VR S+++++EA++ ++ ++V P+TAP+ G
Sbjct: 45 IHADDEALANMPDVVREMHARSGLTEEVRRSAMTLDEAERLALDYIREHVPDPRTAPLAG 104
>gi|444322287|ref|XP_004181799.1| hypothetical protein TBLA_0G03430 [Tetrapisispora blattae CBS 6284]
gi|387514844|emb|CCH62280.1| hypothetical protein TBLA_0G03430 [Tetrapisispora blattae CBS 6284]
Length = 236
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 16/46 (34%), Positives = 29/46 (63%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK 85
+ M EWC+ H ASGLT R S++++E+ + L +F+ +++ K
Sbjct: 67 IDGMGEWCLRQHGASGLTHRCLESTITLEQGQRELTEFIRRWIPQK 112
>gi|422783479|ref|ZP_16836263.1| exonuclease [Escherichia coli TW10509]
gi|323975494|gb|EGB70595.1| exonuclease [Escherichia coli TW10509]
Length = 181
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL DRV+AS++ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLALMDDWNVRTHTASGLVDRVKASTMGDREAELATLEFLKQWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|29654538|ref|NP_820230.1| oligoribonuclease [Coxiella burnetii RSA 493]
gi|153208846|ref|ZP_01947070.1| oligoribonuclease [Coxiella burnetii 'MSU Goat Q177']
gi|154707040|ref|YP_001424673.1| oligoribonuclease [Coxiella burnetii Dugway 5J108-111]
gi|161829936|ref|YP_001597086.1| oligoribonuclease [Coxiella burnetii RSA 331]
gi|165921448|ref|ZP_02219636.1| oligoribonuclease [Coxiella burnetii Q321]
gi|212212380|ref|YP_002303316.1| oligoribonuclease [Coxiella burnetii CbuG_Q212]
gi|212218651|ref|YP_002305438.1| oligoribonuclease [Coxiella burnetii CbuK_Q154]
gi|37999374|sp|Q83C93.1|ORN_COXBU RecName: Full=Oligoribonuclease
gi|29541805|gb|AAO90744.1| oligoribonuclease [Coxiella burnetii RSA 493]
gi|120575697|gb|EAX32321.1| oligoribonuclease [Coxiella burnetii 'MSU Goat Q177']
gi|154356326|gb|ABS77788.1| oligoribonuclease [Coxiella burnetii Dugway 5J108-111]
gi|161761803|gb|ABX77445.1| oligoribonuclease [Coxiella burnetii RSA 331]
gi|165916763|gb|EDR35367.1| oligoribonuclease [Coxiella burnetii Q321]
gi|212010790|gb|ACJ18171.1| oligoribonuclease [Coxiella burnetii CbuG_Q212]
gi|212012913|gb|ACJ20293.1| oligoribonuclease [Coxiella burnetii CbuK_Q154]
Length = 183
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +++L M+ W HH ASGL +RV+ SSV EA+ F+ KYV +P+ G
Sbjct: 47 AIHQPDKLLTAMDNWNTSHHTASGLLERVKNSSVDEVEAETLTLAFLEKYVSAGKSPLCG 106
>gi|16273602|ref|NP_439857.1| oligoribonuclease [Haemophilus influenzae Rd KW20]
gi|260581056|ref|ZP_05848878.1| oligoribonuclease [Haemophilus influenzae RdAW]
gi|1176352|sp|P45340.1|ORN_HAEIN RecName: Full=Oligoribonuclease
gi|1574570|gb|AAC23360.1| conserved hypothetical protein [Haemophilus influenzae Rd KW20]
gi|260092296|gb|EEW76237.1| oligoribonuclease [Haemophilus influenzae RdAW]
Length = 182
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L MN+WC + H+ +GL +R++AS ++ A+ + F+ K+V +P+
Sbjct: 46 LAVHQSDELLNKMNDWCQKTHSENGLIERIKASKLTERAAELQTLDFLKKWVPKGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|383822356|ref|ZP_09977584.1| oligoribonuclease [Mycobacterium phlei RIVM601174]
gi|383331916|gb|EID10411.1| oligoribonuclease [Mycobacterium phlei RIVM601174]
Length = 218
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ +EE L +M + H SGL D VRAS+V++ EA++ + ++ +VK KTAP+ G
Sbjct: 48 IHADEEALSSMIPVVKDMHTRSGLIDEVRASTVTVAEAEEMVLSYIRDHVKQAKTAPLAG 107
>gi|315125481|ref|YP_004067484.1| oligoribonuclease [Pseudoalteromonas sp. SM9913]
gi|359439595|ref|ZP_09229540.1| oligoribonuclease [Pseudoalteromonas sp. BSi20311]
gi|315013994|gb|ADT67332.1| oligoribonuclease [Pseudoalteromonas sp. SM9913]
gi|358025705|dbj|GAA65789.1| oligoribonuclease [Pseudoalteromonas sp. BSi20311]
Length = 181
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+EWC H SGLT R +AS+ A ++ F+ ++V +PM G
Sbjct: 47 AIHQSDELLDGMDEWCTTQHGKSGLTARCKASTFDEAYAVEQTLAFLKQWVPAGASPMCG 106
>gi|319776026|ref|YP_004138514.1| oligoribonuclease [Haemophilus influenzae F3047]
gi|317450617|emb|CBY86837.1| oligoribonuclease [Haemophilus influenzae F3047]
Length = 182
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L MN+WC + H+ +GL +R++AS ++ A+ + F+ K+V +P+
Sbjct: 46 LAVHQSDELLNKMNDWCQKTHSENGLIERIKASKLTERAAELQTLDFLKKWVPKGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|260770593|ref|ZP_05879525.1| oligoribonuclease [Vibrio furnissii CIP 102972]
gi|375129182|ref|YP_004991276.1| oligoribonuclease [Vibrio furnissii NCTC 11218]
gi|260614423|gb|EEX39610.1| oligoribonuclease [Vibrio furnissii CIP 102972]
gi|315178350|gb|ADT85264.1| oligoribonuclease [Vibrio furnissii NCTC 11218]
Length = 181
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ E LQ M++WC H SGL +RVR S VS ++A + F+ ++V +P+ G
Sbjct: 47 AVHQPESELQKMDDWCTNTHTQSGLVERVRQSQVSEDDAVAQTIAFLEQWVPAGKSPICG 106
>gi|392555859|ref|ZP_10302996.1| oligoribonuclease [Pseudoalteromonas undina NCIMB 2128]
Length = 181
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+EWC H SGLT R +AS+ A ++ F+ ++V +PM G
Sbjct: 47 AIHQSDELLDGMDEWCTTQHGKSGLTARCKASTFDEAYAVEQTLAFLKQWVPAGASPMCG 106
>gi|332525250|ref|ZP_08401423.1| oligoribonuclease [Rubrivivax benzoatilyticus JA2]
gi|332108532|gb|EGJ09756.1| oligoribonuclease [Rubrivivax benzoatilyticus JA2]
Length = 186
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 34/60 (56%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ L M+ W H SGL DRV+AS+V EA+ R +F+ +YV +PM G
Sbjct: 52 AVHQSDATLDAMDAWNKGTHGRSGLIDRVKASTVDEAEAEARTIEFLQRYVPRGKSPMCG 111
>gi|296392793|ref|YP_003657677.1| exonuclease RNase T and DNA polymerase III [Segniliparus rotundus
DSM 44985]
gi|296179940|gb|ADG96846.1| Exonuclease RNase T and DNA polymerase III [Segniliparus rotundus
DSM 44985]
Length = 202
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVA-KYVKPKTAPMVG 91
++ E+ L M+E+ H +SGLT+ VRAS +S+ EA++R+ +V ++ P+TA + G
Sbjct: 48 IHAEEDKLAQMDEYVTNMHASSGLTEAVRASELSLAEAEERVLAYVKERFPAPRTAILAG 107
>gi|183983834|ref|YP_001852125.1| oligoribonuclease [Mycobacterium marinum M]
gi|183177160|gb|ACC42270.1| oligoribonuclease Orn [Mycobacterium marinum M]
Length = 215
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++ L +M + + H+ SGLT+ VRAS+V + A+ + ++ ++VK PKTAP+ G
Sbjct: 45 IHADDAALSSMVDVVADMHSRSGLTEEVRASTVDMATAEAMVLDYIGEHVKQPKTAPLAG 104
>gi|452124327|ref|ZP_21936911.1| oligoribonuclease [Bordetella holmesii F627]
gi|452127724|ref|ZP_21940304.1| oligoribonuclease [Bordetella holmesii H558]
gi|451923557|gb|EMD73698.1| oligoribonuclease [Bordetella holmesii F627]
gi|451926593|gb|EMD76726.1| oligoribonuclease [Bordetella holmesii H558]
Length = 181
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 39/59 (66%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ VL M+ W H SGL D+VRAS+++ +A+++L +F+A++V +P+ G
Sbjct: 48 VHQDDSVLDAMDNWNKSTHGKSGLIDKVRASTLTEAQAEQQLIEFLAQHVPAGKSPLCG 106
>gi|270602123|ref|ZP_06221580.1| Oligoribonuclease, partial [Haemophilus influenzae HK1212]
gi|270318221|gb|EFA29423.1| Oligoribonuclease [Haemophilus influenzae HK1212]
Length = 166
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L MN+WC + H+ +GL +R++AS ++ A+ + F+ K+V +P+ G
Sbjct: 10 AVHQSDELLNKMNDWCQKTHSENGLIERIKASKLTERAAELQTLDFLKKWVPKGASPICG 69
>gi|225556491|gb|EEH04779.1| oligoribonuclease [Ajellomyces capsulatus G186AR]
Length = 189
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
+++ E VL NMN+WC++ H SGLT V AS+ + A + L ++ K+V + +T + G
Sbjct: 51 IHHPESVLDNMNDWCIKTHGQSGLTAAVSASTTTPTAAAEGLLAYIKKHVPRERTGLLAG 110
Query: 92 -EYHTSKELLKDSDHFLVFSW 111
H KE L + ++ W
Sbjct: 111 NSVHADKEFLACKPYSMILEW 131
>gi|154271267|ref|XP_001536487.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
gi|150409710|gb|EDN05154.1| conserved hypothetical protein [Ajellomyces capsulatus NAm1]
Length = 189
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/81 (33%), Positives = 45/81 (55%), Gaps = 2/81 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
+++ E VL NMN+WC++ H SGLT V AS+ + A + L ++ K+V + +T + G
Sbjct: 51 IHHPESVLDNMNDWCIKTHGQSGLTAAVSASTTTPTAAAEGLLAYIKKHVPRERTGLLAG 110
Query: 92 -EYHTSKELLKDSDHFLVFSW 111
H KE L + ++ W
Sbjct: 111 NSVHADKEFLACKPYSMILEW 131
>gi|329123183|ref|ZP_08251752.1| oligoribonuclease [Haemophilus aegyptius ATCC 11116]
gi|327471528|gb|EGF16972.1| oligoribonuclease [Haemophilus aegyptius ATCC 11116]
Length = 182
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 38/61 (62%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L MN+WC + H+ +GL +R++AS ++ A+ + F+ K+V +P+
Sbjct: 46 LAVHQSDELLNKMNDWCQKTHSENGLIERIKASKLTERAAELQTLDFLKKWVPKGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|270708972|ref|ZP_06223150.1| Oligoribonuclease, partial [Haemophilus influenzae HK1212]
gi|270315692|gb|EFA27855.1| Oligoribonuclease [Haemophilus influenzae HK1212]
Length = 155
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L MN+WC + H+ +GL +R++AS ++ A+ + F+ K+V +P+ G
Sbjct: 20 AVHQSDELLNKMNDWCQKTHSENGLIERIKASKLTERAAELQTLDFLKKWVPKGASPICG 79
>gi|407069790|ref|ZP_11100628.1| oligoribonuclease [Vibrio cyclitrophicus ZF14]
Length = 181
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M+EWC H SGL R++ S+VS ++A ++ +F+ K+V +P+ G
Sbjct: 55 LDKMDEWCTTTHTGSGLVKRIQESTVSEQDAIQQTIEFLEKWVPKGKSPICG 106
>gi|389839476|ref|YP_006341560.1| oligoribonuclease [Cronobacter sakazakii ES15]
gi|429118426|ref|ZP_19179190.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter sakazakii 680]
gi|387849952|gb|AFJ98049.1| oligoribonuclease [Cronobacter sakazakii ES15]
gi|426327103|emb|CCK09927.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter sakazakii 680]
Length = 181
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL DRV+AS++ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLALMDDWNVRTHTASGLVDRVKASTMGDREAELATLEFLKQWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|385681555|ref|ZP_10055483.1| oligoribonuclease [Amycolatopsis sp. ATCC 39116]
Length = 191
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++ +++ L M + E H SGLTD VR S ++EEA++R+ ++ +V +P +AP+ G
Sbjct: 34 IHADDDTLAGMPDVVREMHAKSGLTDEVRRSVTTLEEAEQRVLDYIRAHVPEPNSAPLAG 93
>gi|189205366|ref|XP_001939018.1| oligoribonuclease [Pyrenophora tritici-repentis Pt-1C-BFP]
gi|187986117|gb|EDU51605.1| oligoribonuclease [Pyrenophora tritici-repentis Pt-1C-BFP]
Length = 196
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 36/70 (51%), Gaps = 2/70 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG- 91
+++++E L M EWC HH SGLT S+ + EEA + L ++ KYV + ++
Sbjct: 50 IHHDKEQLDRMGEWCTRHHGQSGLTQACLDSTTTAEEAAEGLLSYIKKYVPERRIGLLAG 109
Query: 92 -EYHTSKELL 100
H K L
Sbjct: 110 NSVHADKSFL 119
>gi|118619032|ref|YP_907364.1| oligoribonuclease [Mycobacterium ulcerans Agy99]
gi|166216272|sp|A0PU74.1|ORN_MYCUA RecName: Full=Oligoribonuclease
gi|118571142|gb|ABL05893.1| oligoribonuclease Orn [Mycobacterium ulcerans Agy99]
Length = 215
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++ L +M + + H+ SGLT+ VRAS+V + A+ + ++ ++VK PKTAP+ G
Sbjct: 45 IHADDAALSSMVDVVADMHSRSGLTEEVRASTVDMATAEAMVLDYIGEHVKQPKTAPLAG 104
>gi|359774455|ref|ZP_09277822.1| oligoribonuclease [Gordonia effusa NBRC 100432]
gi|359308341|dbj|GAB20600.1| oligoribonuclease [Gordonia effusa NBRC 100432]
Length = 214
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/57 (40%), Positives = 36/57 (63%), Gaps = 1/57 (1%)
Query: 36 NEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK-TAPMVG 91
++E L NM + E H +SGLTD VRAS+V+IE+A + ++ K+V + P+ G
Sbjct: 63 SDEALANMPDVVKEMHASSGLTDEVRASTVTIEQAQAEVLAYIRKHVPTAGSVPLAG 119
>gi|343493054|ref|ZP_08731393.1| oligoribonuclease [Vibrio nigripulchritudo ATCC 27043]
gi|342826561|gb|EGU60983.1| oligoribonuclease [Vibrio nigripulchritudo ATCC 27043]
Length = 181
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ EE L M+EWC H SGL RV+ S+V+ ++A + +F+ ++V +P+ G
Sbjct: 47 AIHQPEEELAKMDEWCTTTHTGSGLVARVKESTVTEQQAIDQTIEFLKQWVPEGKSPICG 106
>gi|1019712|gb|AAA98633.1| YNT20 [Saccharomyces cerevisiae]
Length = 248
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 32/53 (60%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK 85
++Y EV+ MNEWC+EHH S +V AS ++ + + L +++ +Y+ K
Sbjct: 102 IHYGPEVMNKMNEWCIEHHGNSESHPKVLASEKTLAQVEDELLEYIQRYIPDK 154
>gi|451847720|gb|EMD61027.1| hypothetical protein COCSADRAFT_39736 [Cochliobolus sativus ND90Pr]
Length = 182
Score = 45.8 bits (107), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/79 (36%), Positives = 43/79 (54%), Gaps = 3/79 (3%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
+++ +E L M EWC HH SGLT S+ + EEA + L ++ KYV + +TA + G
Sbjct: 35 IHHEKEQLDRMGEWCTNHHGDSGLTQACIDSTTTAEEAAEGLLNYIKKYVPERRTALLAG 94
Query: 92 -EYHTSKE-LLKDSDHFLV 108
H K L+K H +V
Sbjct: 95 NSVHADKGFLVKQPYHIVV 113
>gi|260599488|ref|YP_003212059.1| oligoribonuclease [Cronobacter turicensis z3032]
gi|417789487|ref|ZP_12437131.1| oligoribonuclease [Cronobacter sakazakii E899]
gi|424801196|ref|ZP_18226738.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter sakazakii 696]
gi|429088229|ref|ZP_19150961.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter universalis NCTC
9529]
gi|429101925|ref|ZP_19163899.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter turicensis 564]
gi|429106272|ref|ZP_19168141.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter malonaticus 681]
gi|429116940|ref|ZP_19177858.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter sakazakii 701]
gi|449306687|ref|YP_007439043.1| oligoribonuclease [Cronobacter sakazakii SP291]
gi|260218665|emb|CBA34001.1| Oligoribonuclease [Cronobacter turicensis z3032]
gi|333956393|gb|EGL74052.1| oligoribonuclease [Cronobacter sakazakii E899]
gi|423236917|emb|CCK08608.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter sakazakii 696]
gi|426288574|emb|CCJ90012.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter turicensis 564]
gi|426292995|emb|CCJ94254.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter malonaticus 681]
gi|426320069|emb|CCK03971.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter sakazakii 701]
gi|426508032|emb|CCK16073.1| 3'-to-5' oligoribonuclease (orn) [Cronobacter universalis NCTC
9529]
gi|449096720|gb|AGE84754.1| oligoribonuclease [Cronobacter sakazakii SP291]
Length = 181
Score = 45.8 bits (107), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL DRV+AS++ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLALMDDWNVRTHTASGLVDRVKASTMGDREAELATIEFLKQWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|195054679|ref|XP_001994252.1| GH11306 [Drosophila grimshawi]
gi|193896122|gb|EDV94988.1| GH11306 [Drosophila grimshawi]
Length = 187
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ + + V NMNEWC++HH SGL DR + S+V+ E + + ++ + + P+ G
Sbjct: 53 AIRHPQHVYDNMNEWCMKHHYESGLVDRCKESNVTPELVENIVLSYLKENIPQGQCPLAG 112
>gi|156932395|ref|YP_001436311.1| oligoribonuclease [Cronobacter sakazakii ATCC BAA-894]
gi|156530649|gb|ABU75475.1| hypothetical protein ESA_00171 [Cronobacter sakazakii ATCC BAA-894]
Length = 185
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL DRV+AS++ EA+ +F+ ++V +P+
Sbjct: 50 IAVHQSDEQLALMDDWNVRTHTASGLVDRVKASTMGDREAELATIEFLKQWVPAGKSPIC 109
Query: 91 G 91
G
Sbjct: 110 G 110
>gi|375266887|ref|YP_005024330.1| oligoribonuclease [Vibrio sp. EJY3]
gi|369842207|gb|AEX23351.1| oligoribonuclease [Vibrio sp. EJY3]
Length = 181
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
EE L M++WC H ASGL +RVR S V+ ++A + F+ +V +P+ G
Sbjct: 52 EEELAKMDDWCTNTHTASGLVERVRNSKVTEQDAVAQTIAFLEPWVPKGASPICG 106
>gi|417839979|ref|ZP_12486138.1| Oligoribonuclease [Haemophilus haemolyticus M19107]
gi|341951105|gb|EGT77685.1| Oligoribonuclease [Haemophilus haemolyticus M19107]
Length = 182
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/61 (31%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ + E+L MN+WC + H+ +GL +RV+ S ++ A+ + F+ K+V T+P+
Sbjct: 46 LAVHQSNELLNKMNDWCQKTHSENGLIERVKTSKLTERAAELQTLDFLKKWVPKGTSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|253991561|ref|YP_003042917.1| oligoribonuclease [Photorhabdus asymbiotica]
gi|211638439|emb|CAR67061.1| oligoribonuclease (ec 3.1.-.-) [Photorhabdus asymbiotica subsp.
asymbiotica ATCC 43949]
gi|253783011|emb|CAQ86176.1| oligoribonuclease [Photorhabdus asymbiotica]
Length = 181
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW V H SGL +RV+AS + A+K +F+ K+V +P+
Sbjct: 46 IAIHQSDEQLALMDEWNVRTHTGSGLVERVKASKIDAHGAEKATIEFLEKWVPVGVSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|33151672|ref|NP_873025.1| oligoribonuclease [Haemophilus ducreyi 35000HP]
gi|38372407|sp|Q7VNN8.1|ORN_HAEDU RecName: Full=Oligoribonuclease
gi|33147893|gb|AAP95414.1| oligoribonuclease [Haemophilus ducreyi 35000HP]
Length = 183
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 18/53 (33%), Positives = 34/53 (64%)
Query: 39 VLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+L MNEWC++ H A+GL +RV+ S ++ A+ + F+ ++V ++P+ G
Sbjct: 55 LLSKMNEWCIKTHTANGLIERVKQSKLTERAAELQTLDFLKQWVMKGSSPICG 107
>gi|330466087|ref|YP_004403830.1| oligoribonuclease [Verrucosispora maris AB-18-032]
gi|328809058|gb|AEB43230.1| oligoribonuclease [Verrucosispora maris AB-18-032]
Length = 185
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++ L M E H SGLT+ VR S+V++ EA+ + +V+++VK P+TAP+ G
Sbjct: 34 IHADDAALDAMPEIVRTMHGKSGLTEEVRRSTVTLAEAEDMVLDYVSRHVKDPRTAPLCG 93
>gi|300859054|ref|YP_003784037.1| hypothetical protein cpfrc_01637 [Corynebacterium
pseudotuberculosis FRC41]
gi|383314812|ref|YP_005375667.1| oligoribonuclease [Corynebacterium pseudotuberculosis P54B96]
gi|384505225|ref|YP_005681895.1| oligoribonuclease [Corynebacterium pseudotuberculosis 1002]
gi|384507328|ref|YP_005683997.1| oligoribonuclease [Corynebacterium pseudotuberculosis C231]
gi|384509417|ref|YP_005686085.1| oligoribonuclease [Corynebacterium pseudotuberculosis I19]
gi|384511501|ref|YP_005691079.1| oligoribonuclease [Corynebacterium pseudotuberculosis PAT10]
gi|385808113|ref|YP_005844510.1| oligoribonuclease [Corynebacterium pseudotuberculosis 267]
gi|300686508|gb|ADK29430.1| hypothetical protein cpfrc_01637 [Corynebacterium
pseudotuberculosis FRC41]
gi|302206756|gb|ADL11098.1| Oligoribonuclease [Corynebacterium pseudotuberculosis C231]
gi|302331309|gb|ADL21503.1| Oligoribonuclease [Corynebacterium pseudotuberculosis 1002]
gi|308277000|gb|ADO26899.1| Oligoribonuclease [Corynebacterium pseudotuberculosis I19]
gi|341825440|gb|AEK92961.1| Oligoribonuclease [Corynebacterium pseudotuberculosis PAT10]
gi|380870313|gb|AFF22787.1| Oligoribonuclease [Corynebacterium pseudotuberculosis P54B96]
gi|383805506|gb|AFH52585.1| Oligoribonuclease [Corynebacterium pseudotuberculosis 267]
Length = 219
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK-TAPMVG 91
L M+++ H SGLT +R+S+VSIEEA+ + + +AK+ P+ AP+ G
Sbjct: 68 LAEMDDYVTAMHENSGLTQEIRSSTVSIEEAEDAVLELIAKHCDPQHPAPLAG 120
>gi|73540610|ref|YP_295130.1| oligoribonuclease [Ralstonia eutropha JMP134]
gi|72118023|gb|AAZ60286.1| Exonuclease [Ralstonia eutropha JMP134]
Length = 210
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ VL M+ W H SGL D+V+AS+++ E+A+ L F+ ++V +PM G
Sbjct: 56 IHQSDAVLDGMDNWNKGTHGRSGLIDKVKASTLTEEQAEAELLAFLKRWVPASKSPMCG 114
>gi|387139209|ref|YP_005695188.1| oligoribonuclease [Corynebacterium pseudotuberculosis CIP 52.97]
gi|349735687|gb|AEQ07165.1| Oligoribonuclease [Corynebacterium pseudotuberculosis CIP 52.97]
Length = 219
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK-TAPMVG 91
L M+++ H SGLT +R+S+VSIEEA+ + + +AK+ P+ AP+ G
Sbjct: 68 LAEMDDYVTAMHENSGLTQEIRSSTVSIEEAEDAVLELIAKHCDPQHPAPLAG 120
>gi|218708317|ref|YP_002415938.1| oligoribonuclease [Vibrio splendidus LGP32]
gi|218321336|emb|CAV17286.1| Oligoribonuclease [Vibrio splendidus LGP32]
Length = 181
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 32/52 (61%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M+EWC H SGL R++ S+VS ++A ++ +F+ K+V +P+ G
Sbjct: 55 LDKMDEWCTTTHTGSGLVKRIQDSTVSEQDAIQQTIEFLEKWVPKGKSPICG 106
>gi|379715920|ref|YP_005304257.1| oligoribonuclease [Corynebacterium pseudotuberculosis 316]
gi|392401131|ref|YP_006437731.1| oligoribonuclease [Corynebacterium pseudotuberculosis Cp162]
gi|377654626|gb|AFB72975.1| Oligoribonuclease [Corynebacterium pseudotuberculosis 316]
gi|390532209|gb|AFM07938.1| Oligoribonuclease [Corynebacterium pseudotuberculosis Cp162]
Length = 192
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK-TAPMVG 91
L M+++ H SGLT +R+S+VSIEEA+ + + +AK+ P+ AP+ G
Sbjct: 41 LAEMDDYVTAMHENSGLTQEIRSSTVSIEEAEDAVLELIAKHCDPQHPAPLAG 93
>gi|145480843|ref|XP_001426444.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393519|emb|CAK59046.1| unnamed protein product [Paramecium tetraurelia]
Length = 174
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAK-YVKPKTAPMVG 91
++ +++VL M+EWC H ASGL S+V++ +A +++ QF+ + + PK P+ G
Sbjct: 36 IHADKQVLDGMDEWCTTTHKASGLYQESLNSTVTVGQAQEQILQFLNQNNIPPKVLPLAG 95
>gi|159036666|ref|YP_001535919.1| oligoribonuclease [Salinispora arenicola CNS-205]
gi|157915501|gb|ABV96928.1| Exonuclease RNase T and DNA polymerase III [Salinispora arenicola
CNS-205]
Length = 196
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/60 (38%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ +E L M E H SGLT+ VR S+V + EA+ + +V +VK P+TAP+ G
Sbjct: 45 IHADEAALDKMPEIVATMHAKSGLTEEVRRSTVGLAEAEDLILDYVTSHVKDPRTAPLCG 104
>gi|379707522|ref|YP_005262727.1| oligoribonuclease [Nocardia cyriacigeorgica GUH-2]
gi|374845021|emb|CCF62085.1| Oligoribonuclease [Nocardia cyriacigeorgica GUH-2]
Length = 201
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++E L M + H SGLTD VR S+V++EEA++++ ++ ++ P T P+ G
Sbjct: 34 IHADDEALAAMPPVVADMHARSGLTDEVRRSAVTLEEAEQQVLDYIRQFAPTPGTVPLAG 93
>gi|113868667|ref|YP_727156.1| oligoribonuclease [Ralstonia eutropha H16]
gi|113527443|emb|CAJ93788.1| Oligoribonuclease (3'->5' exoribonuclease) [Ralstonia eutropha H16]
Length = 208
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ VL M+ W H SGL D+V+AS+++ E+A+ L F+ ++V +PM G
Sbjct: 56 IHQSDAVLDGMDNWNKGTHGRSGLIDKVKASTLTEEQAEAELLAFLKRWVPASKSPMCG 114
>gi|375289240|ref|YP_005123781.1| oligoribonuclease [Corynebacterium pseudotuberculosis 3/99-5]
gi|387137150|ref|YP_005693130.1| oligoribonuclease [Corynebacterium pseudotuberculosis 42/02-A]
gi|348607595|gb|AEP70868.1| Oligoribonuclease [Corynebacterium pseudotuberculosis 42/02-A]
gi|371576529|gb|AEX40132.1| Oligoribonuclease [Corynebacterium pseudotuberculosis 3/99-5]
Length = 209
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK-TAPMVG 91
L M+++ H SGLT +R+S+VSIEEA+ + + +AK+ P+ AP+ G
Sbjct: 58 LAEMDDYVTAMHENSGLTQEIRSSTVSIEEAEDAVLELIAKHCDPQHPAPLAG 110
>gi|444921419|ref|ZP_21241255.1| Oligoribonuclease [Wohlfahrtiimonas chitiniclastica SH04]
gi|444507457|gb|ELV07633.1| Oligoribonuclease [Wohlfahrtiimonas chitiniclastica SH04]
Length = 180
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/72 (29%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++VL M++W + H SGL +RVR S++S+ EA++ ++F+ ++ ++P+
Sbjct: 45 IAIHQPDDVLDLMDDWNQKTHGESGLIERVRESNISLAEAEEMTYEFLRLWIAKGSSPLC 104
Query: 91 G-EYHTSKELLK 101
G T + LK
Sbjct: 105 GNSIGTDRRFLK 116
>gi|386740942|ref|YP_006214122.1| oligoribonuclease [Corynebacterium pseudotuberculosis 31]
gi|387141193|ref|YP_005697171.1| oligoribonuclease [Corynebacterium pseudotuberculosis 1/06-A]
gi|389850966|ref|YP_006353201.1| oligoribonuclease [Corynebacterium pseudotuberculosis 258]
gi|355392984|gb|AER69649.1| Oligoribonuclease [Corynebacterium pseudotuberculosis 1/06-A]
gi|384477636|gb|AFH91432.1| Oligoribonuclease [Corynebacterium pseudotuberculosis 31]
gi|388248272|gb|AFK17263.1| Oligoribonuclease [Corynebacterium pseudotuberculosis 258]
Length = 209
Score = 45.4 bits (106), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK-TAPMVG 91
L M+++ H SGLT +R+S+VSIEEA+ + + +AK+ P+ AP+ G
Sbjct: 58 LAEMDDYVTAMHENSGLTQEIRSSTVSIEEAEDAVLELIAKHCDPQHPAPLAG 110
>gi|389863147|ref|YP_006365387.1| oligoribonuclease [Modestobacter marinus]
gi|388485350|emb|CCH86894.1| Oligoribonuclease [Modestobacter marinus]
Length = 226
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++ +++ L M + E H SGLT+ VRAS+V++ EA++++ +V ++V + +TAP+ G
Sbjct: 49 IHADDDALAGMVDVVTEMHAKSGLTEEVRASTVTLAEAEQQVLAYVKRFVPERRTAPLCG 108
>gi|339326711|ref|YP_004686404.1| oligoribonuclease Orn [Cupriavidus necator N-1]
gi|338166868|gb|AEI77923.1| oligoribonuclease Orn [Cupriavidus necator N-1]
Length = 213
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ VL M+ W H SGL D+V+AS+++ E+A+ L F+ ++V +PM G
Sbjct: 56 IHQSDAVLDGMDNWNKGTHGRSGLIDKVKASTLTEEQAEAELLAFLKRWVPANKSPMCG 114
>gi|296420326|ref|XP_002839726.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295635920|emb|CAZ83917.1| unnamed protein product [Tuber melanosporum]
Length = 188
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/53 (35%), Positives = 36/53 (67%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK 85
++Y +EVL M++WC + H+++GL RV S+V++ +A + L ++ K+V K
Sbjct: 51 IHYEKEVLVKMDDWCQKTHSSTGLISRVLESAVTVTQATEGLLAYIKKHVPEK 103
>gi|374704702|ref|ZP_09711572.1| oligoribonuclease [Pseudomonas sp. S9]
Length = 180
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT RVR S +S EA+ + F+ ++V +P+
Sbjct: 45 IAVHQSDEALAGMDEWNTRTHGDSGLTQRVRESKISQAEAEAQTIAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|402304390|ref|ZP_10823460.1| oligoribonuclease [Haemophilus sputorum HK 2154]
gi|400377978|gb|EJP30843.1| oligoribonuclease [Haemophilus sputorum HK 2154]
Length = 182
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 36/56 (64%)
Query: 36 NEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++E+L M++WCV+ H +GL +RV+AS ++ A+ + F+ ++V +P+ G
Sbjct: 51 SDELLAKMSDWCVKTHTENGLIERVKASKLTERAAELQTLDFLKRWVPKGASPICG 106
>gi|359299549|ref|ZP_09185388.1| oligoribonuclease [Haemophilus [parainfluenzae] CCUG 13788]
Length = 182
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/56 (32%), Positives = 36/56 (64%)
Query: 36 NEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++E+L M++WCV+ H +GL +RV+AS ++ A+ + F+ ++V +P+ G
Sbjct: 51 SDELLAKMSDWCVKTHTENGLIERVKASKLTERAAELQTLDFLKRWVPKGASPICG 106
>gi|310793463|gb|EFQ28924.1| exonuclease [Glomerella graminicola M1.001]
Length = 200
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 23/72 (31%), Positives = 41/72 (56%), Gaps = 2/72 (2%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPM 89
C ++ EE + M+ WC H SGLT+ V S+++ ++A L +++ K++ +PKTA +
Sbjct: 33 CVVHQTEERMAQMDAWCTRTHRDSGLTEAVIKSTMTPQQAANTLLEYIKKHIPEPKTALL 92
Query: 90 VG-EYHTSKELL 100
G H + L
Sbjct: 93 AGNSVHADRSFL 104
>gi|345865460|ref|ZP_08817644.1| oligoribonuclease [endosymbiont of Tevnia jerichonana (vent Tica)]
gi|345877914|ref|ZP_08829647.1| hypothetical protein Rifp1Sym_bj00220 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|344225077|gb|EGV51447.1| hypothetical protein Rifp1Sym_bj00220 [endosymbiont of Riftia
pachyptila (vent Ph05)]
gi|345123466|gb|EGW53362.1| oligoribonuclease [endosymbiont of Tevnia jerichonana (vent Tica)]
Length = 182
Score = 45.4 bits (106), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ +L M+EW H SGL RVR SS + +A+ F+ +YV P +PM G
Sbjct: 52 QPLLDGMDEWNQRQHGGSGLLKRVRESSYNEAKAEAETIAFLEQYVPPGVSPMCG 106
>gi|343519485|ref|ZP_08756465.1| oligoribonuclease [Haemophilus pittmaniae HK 85]
gi|343392555|gb|EGV05120.1| oligoribonuclease [Haemophilus pittmaniae HK 85]
Length = 182
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ +L M++WCV+ H A+GL +RV+ S ++ A+ + F+ +YV +P+ G
Sbjct: 47 AVHQDDALLNKMSDWCVKTHTANGLIERVKQSRLTERAAELQTLDFLKRYVDKGCSPICG 106
>gi|304414192|ref|ZP_07395560.1| oligoribonuclease (3'->5' exoribonuclease) [Candidatus Regiella
insecticola LSR1]
gi|304283406|gb|EFL91802.1| oligoribonuclease (3'->5' exoribonuclease) [Candidatus Regiella
insecticola LSR1]
Length = 181
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW HN SGL +R++ S+ A+K+ +F+ KYV +P+
Sbjct: 46 IAIHQSDETLSLMDEWNTRTHNDSGLVNRIKNSTTDEAAAEKQTIEFLKKYVPQGVSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|451340256|ref|ZP_21910755.1| 3'-to-5' oligoribonuclease (orn) [Amycolatopsis azurea DSM 43854]
gi|449416975|gb|EMD22670.1| 3'-to-5' oligoribonuclease (orn) [Amycolatopsis azurea DSM 43854]
Length = 202
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++ ++E L M E E H SGLT+ VR S+V++EEA++R+ +++ +V + AP+ G
Sbjct: 45 IHADDETLDGMPEVVREMHARSGLTEEVRRSTVTMEEAEQRVLEYIRAHVPEANVAPLAG 104
>gi|212710150|ref|ZP_03318278.1| hypothetical protein PROVALCAL_01204 [Providencia alcalifaciens DSM
30120]
gi|422019098|ref|ZP_16365648.1| oligoribonuclease [Providencia alcalifaciens Dmel2]
gi|212687149|gb|EEB46677.1| hypothetical protein PROVALCAL_01204 [Providencia alcalifaciens DSM
30120]
gi|414103640|gb|EKT65214.1| oligoribonuclease [Providencia alcalifaciens Dmel2]
Length = 180
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ EE L M+EW V H SGL +R+R S +S EA+ +F+ K+V +P+
Sbjct: 46 IAVHQTEEQLALMDEWNVNTHTNSGLVERIRKSVISEREAELATIEFLEKWVPKGVSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|319761926|ref|YP_004125863.1| exonuclease rnase t and DNA polymerase iii [Alicycliphilus
denitrificans BC]
gi|330826210|ref|YP_004389513.1| Exonuclease RNase T and DNA polymerase III [Alicycliphilus
denitrificans K601]
gi|317116487|gb|ADU98975.1| Exonuclease RNase T and DNA polymerase III [Alicycliphilus
denitrificans BC]
gi|329311582|gb|AEB85997.1| Exonuclease RNase T and DNA polymerase III [Alicycliphilus
denitrificans K601]
Length = 203
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + VL M+ W H SGL D+VRAS+++ +A++++ F+++YV PM G
Sbjct: 70 IHQPDTVLDAMDAWNKGTHGRSGLIDKVRASTLTEADAEQQIIDFLSRYVPKGKVPMCG 128
>gi|261856160|ref|YP_003263443.1| exonuclease RNase T and DNA polymerase III [Halothiobacillus
neapolitanus c2]
gi|261836629|gb|ACX96396.1| Exonuclease RNase T and DNA polymerase III [Halothiobacillus
neapolitanus c2]
Length = 183
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++ + L M+EW H SGL RV AS+ S+ +A+ + +F+ +V P +PM
Sbjct: 48 IAIHHPKSTLDKMDEWNRRTHGESGLIARVLASTTSMRQAELQTLEFLQAWVVPGKSPMA 107
Query: 91 G 91
G
Sbjct: 108 G 108
>gi|194290291|ref|YP_002006198.1| oligoribonuclease [Cupriavidus taiwanensis LMG 19424]
gi|193224126|emb|CAQ70135.1| oligoribonuclease [Cupriavidus taiwanensis LMG 19424]
Length = 211
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ VL M+ W H SGL D+V+AS+++ E+A+ L F+ ++V +PM G
Sbjct: 56 IHQSDAVLDGMDNWNKGTHGRSGLIDKVKASTLTEEQAEAELLAFLKRWVPAGKSPMCG 114
>gi|372268155|ref|ZP_09504203.1| oligoribonuclease [Alteromonas sp. S89]
Length = 180
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ +L M++W E H SGL RV+ SS+S +A++ +F++ +V +PM G
Sbjct: 45 AIHQSDALLAAMDDWNTEQHGGSGLVARVKDSSISEHQAERETIEFLSHWVPEGASPMCG 104
>gi|440481300|gb|ELQ61899.1| phosphoglucomutase [Magnaporthe oryzae P131]
Length = 761
Score = 45.1 bits (105), Expect = 0.005, Method: Composition-based stats.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV 82
++ +E + M+EWC + H SGLT RV S+ + EEA L ++ K+V
Sbjct: 49 VHQTQERMDKMDEWCTKQHGGSGLTARVVGSTTTPEEAADGLLAYIKKHV 98
>gi|350413166|ref|XP_003489902.1| PREDICTED: probable oligoribonuclease-like [Bombus impatiens]
Length = 224
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 17/56 (30%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK-TAPMVG 91
+E+L NMN+WC+ H +GL + R S ++E ++ + +++ Y++ + T P+ G
Sbjct: 91 DEILNNMNDWCLATHQKTGLINESRLSKTTVENTEQIVLKYLKTYIEEEATCPLAG 146
>gi|359435628|ref|ZP_09225820.1| oligoribonuclease [Pseudoalteromonas sp. BSi20652]
gi|357917723|dbj|GAA62069.1| oligoribonuclease [Pseudoalteromonas sp. BSi20652]
Length = 181
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 33/60 (55%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+EWC H SGLT R +AS+ A + F+ ++V +PM G
Sbjct: 47 AIHQSDELLNGMDEWCTTQHGKSGLTARCKASTYDEAYAVAQTLDFLKQWVPAGVSPMCG 106
>gi|83745794|ref|ZP_00942851.1| Oligoribonuclease [Ralstonia solanacearum UW551]
gi|83727484|gb|EAP74605.1| Oligoribonuclease [Ralstonia solanacearum UW551]
Length = 289
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+ W H SGL D+V+AS+ + +A+ L F+ K+V +PM G
Sbjct: 140 IHQSDEILDGMDAWNKGTHGRSGLIDKVKASTTTEAQAEADLLDFLKKWVPKSKSPMCG 198
>gi|387771494|ref|ZP_10127655.1| oligoribonuclease [Haemophilus parahaemolyticus HK385]
gi|386908853|gb|EIJ73539.1| oligoribonuclease [Haemophilus parahaemolyticus HK385]
Length = 182
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 36 NEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++E+L M++WCV+ H +GL RV+AS ++ A+ + F+ K+V +P+ G
Sbjct: 51 SDELLGKMSDWCVKTHTENGLIKRVKASKLTERAAELQTIDFLKKWVPKGVSPICG 106
>gi|429462700|ref|YP_007184163.1| oligoribonuclease [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|451811545|ref|YP_007448000.1| oligoribonuclease [Candidatus Kinetoplastibacterium crithidii
TCC036E]
gi|429338214|gb|AFZ82637.1| oligoribonuclease [Candidatus Kinetoplastibacterium crithidii (ex
Angomonas deanei ATCC 30255)]
gi|451776703|gb|AGF47702.1| oligoribonuclease [Candidatus Kinetoplastibacterium crithidii
TCC036E]
Length = 181
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVGE-YHT 95
+E+L M++W HN SGL D+VR S ++ +A+ + F+ KYV +P+ G H
Sbjct: 53 DEILDAMDKWNTSVHNRSGLVDKVRKSELNESDAEIIILDFLKKYVIVNKSPLCGNTIHQ 112
Query: 96 SKELLK 101
+ +K
Sbjct: 113 DRNFMK 118
>gi|124268095|ref|YP_001022099.1| oligoribonuclease [Methylibium petroleiphilum PM1]
gi|124260870|gb|ABM95864.1| putative oligoribonuclease protein [Methylibium petroleiphilum PM1]
Length = 191
Score = 45.1 bits (105), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ VL M+ W H SGL DRV+AS+V A++++ +F+ YV +PM G
Sbjct: 57 AVHQSDAVLDAMDAWNKGTHGRSGLIDRVKASTVDEAAAERQVIEFLKAYVPAGKSPMSG 116
>gi|354548574|emb|CCE45311.1| hypothetical protein CPAR2_703240 [Candida parapsilosis]
Length = 276
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASS-VSIEEADKRLHQFVAKYV-KPKTAPMV 90
+Y +E L M+EWC H SGL D+V A+ + +E + +L Q++ +YV KP+ +
Sbjct: 119 VYCPKEKLDAMDEWCTTTHTKSGLIDKVLANPEATTDEVESQLLQYIQRYVTKPRIGVLA 178
Query: 91 G 91
G
Sbjct: 179 G 179
>gi|262273022|ref|ZP_06050841.1| oligoribonuclease [Grimontia hollisae CIP 101886]
gi|262222932|gb|EEY74238.1| oligoribonuclease [Grimontia hollisae CIP 101886]
Length = 181
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M+EWC + H SGL +RV+ S+++ +A K F+ ++V +P+ G
Sbjct: 47 AIHQSDEELAKMDEWCTKTHTRSGLVERVKESTINEAQAVKETIAFLQEWVPAGVSPICG 106
>gi|386334076|ref|YP_006030247.1| oligoribonuclease [Ralstonia solanacearum Po82]
gi|334196526|gb|AEG69711.1| oligoribonuclease [Ralstonia solanacearum Po82]
Length = 289
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+ W H SGL D+V+AS+ + +A+ L F+ K+V +PM G
Sbjct: 140 IHQSDEILDGMDAWNKGTHGRSGLIDKVKASTTTEAQAEADLLDFLKKWVPKSKSPMCG 198
>gi|261400541|ref|ZP_05986666.1| oligoribonuclease [Neisseria lactamica ATCC 23970]
gi|269209608|gb|EEZ76063.1| oligoribonuclease [Neisseria lactamica ATCC 23970]
Length = 187
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +++VL M+EW H +GLT RVR S + E +++L F++++V + PM G
Sbjct: 46 AVHQSDDVLNKMDEWNTATHGRTGLTQRVRESLHTEAEVEQKLLDFMSEWVPGRATPMCG 105
>gi|207743707|ref|YP_002260099.1| oligoribonuclease protein [Ralstonia solanacearum IPO1609]
gi|206595106|emb|CAQ62033.1| oligoribonuclease protein [Ralstonia solanacearum IPO1609]
Length = 219
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+ W H SGL D+V+AS+ + +A+ L F+ K+V +PM G
Sbjct: 70 IHQSDEILDGMDAWNKGTHGRSGLIDKVKASTTTEAQAEADLLDFLKKWVPKSKSPMCG 128
>gi|90407113|ref|ZP_01215302.1| oligoribonuclease [Psychromonas sp. CNPT3]
gi|90311835|gb|EAS39931.1| oligoribonuclease [Psychromonas sp. CNPT3]
Length = 179
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ M+EWC HH SGLT RV S +S +A++ F+ K+ +P+ G
Sbjct: 53 MDAMDEWCTTHHGDSGLTQRVLESDISCAQAEQATLAFLKKWTLQGASPLCG 104
>gi|444353581|ref|YP_007389725.1| 3'-to-5' oligoribonuclease (orn) [Enterobacter aerogenes EA1509E]
gi|443904411|emb|CCG32185.1| 3'-to-5' oligoribonuclease (orn) [Enterobacter aerogenes EA1509E]
Length = 181
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M+EW V H SGL DRV+AS+V EA+ +F+ ++V +P+ G
Sbjct: 55 LALMDEWNVRTHTGSGLVDRVKASTVGDREAELATIEFLKQWVPAGKSPICG 106
>gi|115351008|ref|YP_772847.1| oligoribonuclease [Burkholderia ambifaria AMMD]
gi|172060013|ref|YP_001807665.1| oligoribonuclease [Burkholderia ambifaria MC40-6]
gi|122323700|sp|Q0BH60.1|ORN_BURCM RecName: Full=Oligoribonuclease
gi|115280996|gb|ABI86513.1| Exonuclease, RNase T and DNA polymerase III [Burkholderia ambifaria
AMMD]
gi|171992530|gb|ACB63449.1| Exonuclease RNase T and DNA polymerase III [Burkholderia ambifaria
MC40-6]
Length = 206
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRVRAS+V+ +A +L F+A+YV P +PM G
Sbjct: 59 AIHQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEADAAAQLQAFLAQYVSPGKSPMCG 118
>gi|206561254|ref|YP_002232019.1| oligoribonuclease [Burkholderia cenocepacia J2315]
gi|421867186|ref|ZP_16298845.1| 3'-to-5' oligoribonuclease (orn) [Burkholderia cenocepacia H111]
gi|444362039|ref|ZP_21162605.1| exonuclease [Burkholderia cenocepacia BC7]
gi|444371179|ref|ZP_21170754.1| exonuclease [Burkholderia cenocepacia K56-2Valvano]
gi|198037296|emb|CAR53218.1| oligoribonuclease [Burkholderia cenocepacia J2315]
gi|358072600|emb|CCE49723.1| 3'-to-5' oligoribonuclease (orn) [Burkholderia cenocepacia H111]
gi|443595871|gb|ELT64418.1| exonuclease [Burkholderia cenocepacia K56-2Valvano]
gi|443597504|gb|ELT65925.1| exonuclease [Burkholderia cenocepacia BC7]
Length = 206
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRVRAS+V+ +A +L F+A+YV P +PM G
Sbjct: 59 AIHQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEADAAAQLQAFLAQYVSPGKSPMCG 118
>gi|107022156|ref|YP_620483.1| oligoribonuclease [Burkholderia cenocepacia AU 1054]
gi|116689101|ref|YP_834724.1| oligoribonuclease [Burkholderia cenocepacia HI2424]
gi|170732389|ref|YP_001764336.1| oligoribonuclease [Burkholderia cenocepacia MC0-3]
gi|254245960|ref|ZP_04939281.1| Oligoribonuclease (3'->5' exoribonuclease) [Burkholderia
cenocepacia PC184]
gi|123371764|sp|Q1BXZ5.1|ORN_BURCA RecName: Full=Oligoribonuclease
gi|166215751|sp|A0K5Q4.1|ORN_BURCH RecName: Full=Oligoribonuclease
gi|105892345|gb|ABF75510.1| Exonuclease, RNase T and DNA polymerase III [Burkholderia
cenocepacia AU 1054]
gi|116647190|gb|ABK07831.1| Exonuclease, RNase T and DNA polymerase III [Burkholderia
cenocepacia HI2424]
gi|124870736|gb|EAY62452.1| Oligoribonuclease (3'->5' exoribonuclease) [Burkholderia
cenocepacia PC184]
gi|169815631|gb|ACA90214.1| Exonuclease RNase T and DNA polymerase III [Burkholderia
cenocepacia MC0-3]
Length = 206
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRVRAS+V+ EA +L F+A+YV P +PM G
Sbjct: 59 AIHQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEAEAAAQLQAFLAQYVSPGKSPMCG 118
>gi|404258785|ref|ZP_10962102.1| oligoribonuclease [Gordonia namibiensis NBRC 108229]
gi|403402565|dbj|GAC00512.1| oligoribonuclease [Gordonia namibiensis NBRC 108229]
Length = 199
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++ ++E L +M + + H SGLT+ VRAS+V++ EA+K + ++ K+V P P+ G
Sbjct: 45 IHADDEALASMPDVVTKMHADSGLTEEVRASTVTLAEAEKMVLDYIRKHVTTPGAVPLAG 104
>gi|170700979|ref|ZP_02891961.1| Exonuclease RNase T and DNA polymerase III [Burkholderia ambifaria
IOP40-10]
gi|170134119|gb|EDT02465.1| Exonuclease RNase T and DNA polymerase III [Burkholderia ambifaria
IOP40-10]
Length = 206
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRVRAS+V+ +A +L F+A+YV P +PM G
Sbjct: 59 AIHQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEADAAAQLQAFLAQYVSPGKSPMCG 118
>gi|336248342|ref|YP_004592052.1| oligoribonuclease [Enterobacter aerogenes KCTC 2190]
gi|334734398|gb|AEG96773.1| oligoribonuclease [Enterobacter aerogenes KCTC 2190]
Length = 181
Score = 45.1 bits (105), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M+EW V H SGL DRV+AS+V EA+ +F+ ++V +P+ G
Sbjct: 55 LALMDEWNVRTHTGSGLVDRVKASTVGDREAELATIEFLKQWVPAGKSPICG 106
>gi|386388853|ref|ZP_10073699.1| oligoribonuclease [Haemophilus paraphrohaemolyticus HK411]
gi|385696996|gb|EIG27456.1| oligoribonuclease [Haemophilus paraphrohaemolyticus HK411]
Length = 182
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 36 NEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++E+L M++WCV+ H +GL RV+AS ++ A+ + F+ K+V +P+ G
Sbjct: 51 SDELLGKMSDWCVKTHTENGLIKRVKASKLTERAAELQTIDFLKKWVPKGASPICG 106
>gi|407793617|ref|ZP_11140650.1| oligoribonuclease [Idiomarina xiamenensis 10-D-4]
gi|407214694|gb|EKE84538.1| oligoribonuclease [Idiomarina xiamenensis 10-D-4]
Length = 185
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 35/61 (57%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ E+ L M++W V H SGL +RV+AS + +EA ++ F+ +YV +P+
Sbjct: 46 LAIHQPEQYLARMDDWNVNTHTQSGLVERVKASRIDEDEAVRQTLAFLQQYVASGKSPLC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|253996722|ref|YP_003048786.1| oligoribonuclease [Methylotenera mobilis JLW8]
gi|253983401|gb|ACT48259.1| Exonuclease RNase T and DNA polymerase III [Methylotenera mobilis
JLW8]
Length = 186
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++EVL M+ W H SGL D+V+AS++S EA ++ +F+ +V +PM G
Sbjct: 53 VHQSDEVLDGMDAWNKGAHGRSGLIDKVKASTLSEAEASAQMIEFLKAHVPSGKSPMCG 111
>gi|221213533|ref|ZP_03586507.1| oligoribonuclease [Burkholderia multivorans CGD1]
gi|221166322|gb|EED98794.1| oligoribonuclease [Burkholderia multivorans CGD1]
Length = 211
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRVRAS+V+ EA +L F+A+YV P +PM G
Sbjct: 59 AIHQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEAEAAAQLQAFLAQYVPPGKSPMCG 118
>gi|433603076|ref|YP_007035445.1| Oligoribonuclease [Saccharothrix espanaensis DSM 44229]
gi|407880929|emb|CCH28572.1| Oligoribonuclease [Saccharothrix espanaensis DSM 44229]
Length = 198
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++ L +M E H SGLT+ VR S+V++ EA++++ ++ ++V P+TAP+ G
Sbjct: 40 IHADDPALDSMPEIVTAMHAKSGLTEEVRRSTVTLAEAEEQVLAYIKQWVPDPRTAPLAG 99
>gi|441514286|ref|ZP_20996106.1| oligoribonuclease [Gordonia amicalis NBRC 100051]
gi|441450846|dbj|GAC54067.1| oligoribonuclease [Gordonia amicalis NBRC 100051]
Length = 199
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++ ++E L +M + + H SGLTD VR S+V++ EA+K + ++ K+V P P+ G
Sbjct: 45 IHADDEALASMPDVVTKMHADSGLTDEVRKSTVTLAEAEKMVLDYIRKHVTTPGAVPLAG 104
>gi|421252848|ref|ZP_15708316.1| oligoribonuclease, partial [Pasteurella multocida subsp. multocida
str. Anand1_buffalo]
gi|401695314|gb|EJS88603.1| oligoribonuclease, partial [Pasteurella multocida subsp. multocida
str. Anand1_buffalo]
Length = 133
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L MN+WC++ H +GL +RV+ S ++ A+ + F+ K+V +P+ G
Sbjct: 47 AIHQSDECLAKMNDWCMKTHTENGLVERVKNSRLTERAAELQTLDFLKKWVPKGVSPICG 106
>gi|145593678|ref|YP_001157975.1| oligoribonuclease [Salinispora tropica CNB-440]
gi|145303015|gb|ABP53597.1| Exonuclease, RNase T and DNA polymerase III [Salinispora tropica
CNB-440]
Length = 198
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ +E L M E H SGLT+ VR S++ + EA++ + ++ +VK P+TAP+ G
Sbjct: 47 IHADEAALDKMPEIVATMHAKSGLTEEVRRSTIGLAEAEEMVLDYITSHVKDPRTAPLCG 106
>gi|381400476|ref|ZP_09925441.1| oligoribonuclease [Kingella kingae PYKK081]
gi|380834521|gb|EIC14361.1| oligoribonuclease [Kingella kingae PYKK081]
Length = 182
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E++ M+EWC H +GLT RV+ S+ + + + L ++ +++ T PM G
Sbjct: 46 AIHQSDEIMNGMDEWCTTTHARTGLTQRVKESTWTEAQVESELLAWMQQWLPANTTPMCG 105
>gi|385789360|ref|YP_005820483.1| oligoribonuclease [Fibrobacter succinogenes subsp. succinogenes
S85]
gi|302326392|gb|ADL25593.1| oligoribonuclease [Fibrobacter succinogenes subsp. succinogenes
S85]
Length = 185
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E V ++M+EW HHN SGL DR R S S+++A+ +F+ + + + G
Sbjct: 53 AIHQSENVFESMDEWNTRHHNQSGLVDRCRRSQYSLKDAELETLRFIKPFTEKGKNLLCG 112
>gi|119491524|ref|XP_001263283.1| RNA exonuclease Rex2, putative [Neosartorya fischeri NRRL 181]
gi|119411443|gb|EAW21386.1| RNA exonuclease Rex2, putative [Neosartorya fischeri NRRL 181]
Length = 188
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/81 (32%), Positives = 42/81 (51%), Gaps = 2/81 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
+ ++ VL +M+ WCV+ H +GLT V AS+ + A L ++ +YV +P+TA + G
Sbjct: 51 IRHDRSVLDSMSPWCVDTHGRTGLTAAVLASTTNPAAAAASLLAYIQRYVPRPRTALLAG 110
Query: 92 -EYHTSKELLKDSDHFLVFSW 111
H K L + V W
Sbjct: 111 NSVHADKMFLAKEPYKAVLEW 131
>gi|161525395|ref|YP_001580407.1| oligoribonuclease [Burkholderia multivorans ATCC 17616]
gi|189349868|ref|YP_001945496.1| oligoribonuclease [Burkholderia multivorans ATCC 17616]
gi|221201292|ref|ZP_03574332.1| oligoribonuclease [Burkholderia multivorans CGD2M]
gi|221206254|ref|ZP_03579267.1| oligoribonuclease [Burkholderia multivorans CGD2]
gi|421473014|ref|ZP_15921164.1| exonuclease [Burkholderia multivorans ATCC BAA-247]
gi|421476703|ref|ZP_15924573.1| exonuclease [Burkholderia multivorans CF2]
gi|160342824|gb|ABX15910.1| Exonuclease RNase T and DNA polymerase III [Burkholderia
multivorans ATCC 17616]
gi|189333890|dbj|BAG42960.1| oligoribonuclease [Burkholderia multivorans ATCC 17616]
gi|221173563|gb|EEE05997.1| oligoribonuclease [Burkholderia multivorans CGD2]
gi|221179142|gb|EEE11549.1| oligoribonuclease [Burkholderia multivorans CGD2M]
gi|400221886|gb|EJO52309.1| exonuclease [Burkholderia multivorans ATCC BAA-247]
gi|400227899|gb|EJO57872.1| exonuclease [Burkholderia multivorans CF2]
Length = 211
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/60 (43%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRVRAS+V+ EA +L F+A+YV P +PM G
Sbjct: 59 AIHQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEAEAAAQLQAFLAQYVPPGKSPMCG 118
>gi|401761917|ref|YP_006576924.1| oligoribonuclease [Enterobacter cloacae subsp. cloacae ENHKU01]
gi|400173451|gb|AFP68300.1| oligoribonuclease [Enterobacter cloacae subsp. cloacae ENHKU01]
Length = 181
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +++ L M+EW V H SGL DRV+AS++ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDDQLALMDEWNVRTHTGSGLVDRVKASTLGDREAELATLEFLKQWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|417842177|ref|ZP_12488272.1| Oligoribonuclease [Haemophilus haemolyticus M19501]
gi|341947957|gb|EGT74598.1| Oligoribonuclease [Haemophilus haemolyticus M19501]
Length = 182
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L MN+WC + H+ +GL +RV+ S ++ A+ + F+ K+V +P+
Sbjct: 46 LAVHQSDELLNKMNDWCQKTHSENGLIERVKGSKLTERAAELQTLDFLKKWVPKGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|452959161|gb|EME64501.1| oligoribonuclease [Amycolatopsis decaplanina DSM 44594]
Length = 202
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++ +E L M E E H SGLT+ VR S+V++EEA++R+ +++ +V + AP+ G
Sbjct: 45 IHAGDETLDGMPEVVREMHARSGLTEEVRRSTVTMEEAEQRVLEYIRTHVPEANVAPLAG 104
>gi|220934255|ref|YP_002513154.1| Exonuclease RNase T and DNA polymerase III [Thioalkalivibrio
sulfidophilus HL-EbGr7]
gi|219995565|gb|ACL72167.1| Exonuclease RNase T and DNA polymerase III [Thioalkalivibrio
sulfidophilus HL-EbGr7]
Length = 181
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ +L M++W + H SGL DRVR S + EA++ +F+ KY+ + +PM G
Sbjct: 47 AVHQSDAILARMDDWNRDTHGRSGLIDRVRMSLHTEIEAEQETLRFLEKYIPRRGSPMCG 106
>gi|421899365|ref|ZP_16329730.1| oligoribonuclease protein [Ralstonia solanacearum MolK2]
gi|206590571|emb|CAQ37533.1| oligoribonuclease protein [Ralstonia solanacearum MolK2]
Length = 185
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 35/59 (59%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+ W H SGL D+V+AS+ + +A+ L F+ K+V +PM G
Sbjct: 36 IHQSDEILDGMDAWNKGTHGRSGLIDKVKASTTTEAQAEADLLDFLKKWVPKSKSPMCG 94
>gi|333374817|ref|ZP_08466651.1| oligoribonuclease [Kingella kingae ATCC 23330]
gi|332974570|gb|EGK11490.1| oligoribonuclease [Kingella kingae ATCC 23330]
Length = 182
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E++ M+EWC H +GLT RV+ S+ + + + L ++ +++ T PM G
Sbjct: 46 AIHQSDEIMNGMDEWCTTTHARTGLTQRVKESTWTEAQVESELLAWMQQWLPANTTPMCG 105
>gi|225681728|gb|EEH20012.1| phosphoglucomutase [Paracoccidioides brasiliensis Pb03]
Length = 791
Score = 44.7 bits (104), Expect = 0.007, Method: Composition-based stats.
Identities = 19/53 (35%), Positives = 33/53 (62%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK 85
++Y + VL NMN+WC++ H +GLT V +S+ + A + L ++ K+V K
Sbjct: 74 IHYPKSVLDNMNDWCIKTHGRTGLTAAVLSSTTTPTAAAEGLLAYIKKHVPQK 126
>gi|407716818|ref|YP_006838098.1| exonuclease RNase T and DNA polymerase III [Cycloclasticus sp. P1]
gi|407257154|gb|AFT67595.1| Exonuclease RNase T and DNA polymerase III [Cycloclasticus sp. P1]
Length = 182
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/56 (33%), Positives = 35/56 (62%)
Query: 36 NEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ + M++W +HH SGL +RV SS+S +A+++ +F+ K+V +PM G
Sbjct: 51 TKQTMDAMDDWNQQHHGQSGLIERVLKSSLSERDAEQQTIEFLEKWVPQGASPMCG 106
>gi|365143028|ref|ZP_09348020.1| oligoribonuclease [Klebsiella sp. 4_1_44FAA]
gi|363650525|gb|EHL89615.1| oligoribonuclease [Klebsiella sp. 4_1_44FAA]
Length = 181
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M+EW V H SGL DRV+AS+VS +A+ +F+ ++V +P+ G
Sbjct: 55 LAVMDEWNVRTHTGSGLVDRVKASTVSEHDAELATIEFLKQWVPAGKSPICG 106
>gi|261417450|ref|YP_003251133.1| Exonuclease RNase T and DNA polymerase III [Fibrobacter
succinogenes subsp. succinogenes S85]
gi|261373906|gb|ACX76651.1| Exonuclease RNase T and DNA polymerase III [Fibrobacter
succinogenes subsp. succinogenes S85]
Length = 179
Score = 44.7 bits (104), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 19/60 (31%), Positives = 34/60 (56%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E V ++M+EW HHN SGL DR R S S+++A+ +F+ + + + G
Sbjct: 47 AIHQSENVFESMDEWNTRHHNQSGLVDRCRRSQYSLKDAELETLRFIKPFTEKGKNLLCG 106
>gi|15609648|ref|NP_217027.1| Oligoribonuclease Orn [Mycobacterium tuberculosis H37Rv]
gi|15842039|ref|NP_337076.1| oligoribonuclease [Mycobacterium tuberculosis CDC1551]
gi|31793691|ref|NP_856184.1| oligoribonuclease [Mycobacterium bovis AF2122/97]
gi|121638393|ref|YP_978617.1| oligoribonuclease [Mycobacterium bovis BCG str. Pasteur 1173P2]
gi|148662347|ref|YP_001283870.1| oligoribonuclease [Mycobacterium tuberculosis H37Ra]
gi|148823708|ref|YP_001288462.1| oligoribonuclease [Mycobacterium tuberculosis F11]
gi|167966612|ref|ZP_02548889.1| oligoribonuclease [Mycobacterium tuberculosis H37Ra]
gi|224990887|ref|YP_002645574.1| oligoribonuclease [Mycobacterium bovis BCG str. Tokyo 172]
gi|253798409|ref|YP_003031410.1| oligoribonuclease [Mycobacterium tuberculosis KZN 1435]
gi|254232640|ref|ZP_04925967.1| oligoribonuclease orn [Mycobacterium tuberculosis C]
gi|254366813|ref|ZP_04982855.1| oligoribonuclease orn [Mycobacterium tuberculosis str. Haarlem]
gi|254551558|ref|ZP_05142005.1| oligoribonuclease [Mycobacterium tuberculosis '98-R604 INH-RIF-EM']
gi|289444042|ref|ZP_06433786.1| oligoribonuclease orn [Mycobacterium tuberculosis T46]
gi|289448156|ref|ZP_06437900.1| oligoribonuclease orn [Mycobacterium tuberculosis CPHL_A]
gi|289570671|ref|ZP_06450898.1| oligoribonuclease orn [Mycobacterium tuberculosis T17]
gi|289575216|ref|ZP_06455443.1| oligoribonuclease orn [Mycobacterium tuberculosis K85]
gi|289746293|ref|ZP_06505671.1| oligoribonuclease [Mycobacterium tuberculosis 02_1987]
gi|289751120|ref|ZP_06510498.1| oligoribonuclease orn [Mycobacterium tuberculosis T92]
gi|289754620|ref|ZP_06513998.1| oligoribonuclease orn [Mycobacterium tuberculosis EAS054]
gi|289758643|ref|ZP_06518021.1| oligoribonuclease orn [Mycobacterium tuberculosis T85]
gi|289762679|ref|ZP_06522057.1| oligoribonuclease orn [Mycobacterium tuberculosis GM 1503]
gi|294994382|ref|ZP_06800073.1| oligoribonuclease [Mycobacterium tuberculosis 210]
gi|297635119|ref|ZP_06952899.1| oligoribonuclease [Mycobacterium tuberculosis KZN 4207]
gi|297732110|ref|ZP_06961228.1| oligoribonuclease [Mycobacterium tuberculosis KZN R506]
gi|298525983|ref|ZP_07013392.1| oligoribonuclease orn [Mycobacterium tuberculosis 94_M4241A]
gi|306776784|ref|ZP_07415121.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu001]
gi|306780550|ref|ZP_07418887.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu002]
gi|306785311|ref|ZP_07423633.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu003]
gi|306789665|ref|ZP_07427987.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu004]
gi|306793992|ref|ZP_07432294.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu005]
gi|306798387|ref|ZP_07436689.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu006]
gi|306804267|ref|ZP_07440935.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu008]
gi|306807692|ref|ZP_07444360.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu007]
gi|306968664|ref|ZP_07481325.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu009]
gi|306972895|ref|ZP_07485556.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu010]
gi|307080608|ref|ZP_07489778.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu011]
gi|307085195|ref|ZP_07494308.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu012]
gi|313659444|ref|ZP_07816324.1| oligoribonuclease [Mycobacterium tuberculosis KZN V2475]
gi|339632537|ref|YP_004724179.1| oligoribonuclease [Mycobacterium africanum GM041182]
gi|340627525|ref|YP_004745977.1| oligoribonuclease ORN [Mycobacterium canettii CIPT 140010059]
gi|375295672|ref|YP_005099939.1| oligoribonuclease orn [Mycobacterium tuberculosis KZN 4207]
gi|378772247|ref|YP_005171980.1| oligoribonuclease [Mycobacterium bovis BCG str. Mexico]
gi|383308286|ref|YP_005361097.1| oligoribonuclease [Mycobacterium tuberculosis RGTB327]
gi|385991821|ref|YP_005910119.1| oligoribonuclease [Mycobacterium tuberculosis CCDC5180]
gi|385995440|ref|YP_005913738.1| oligoribonuclease [Mycobacterium tuberculosis CCDC5079]
gi|385999291|ref|YP_005917590.1| oligoribonuclease [Mycobacterium tuberculosis CTRI-2]
gi|386005411|ref|YP_005923690.1| oligoribonuclease [Mycobacterium tuberculosis RGTB423]
gi|392387149|ref|YP_005308778.1| orn [Mycobacterium tuberculosis UT205]
gi|392431880|ref|YP_006472924.1| oligoribonuclease orn [Mycobacterium tuberculosis KZN 605]
gi|397674415|ref|YP_006515950.1| oligoribonuclease [Mycobacterium tuberculosis H37Rv]
gi|422813559|ref|ZP_16861931.1| oligoribonuclease orn [Mycobacterium tuberculosis CDC1551A]
gi|424804849|ref|ZP_18230280.1| oligoribonuclease orn [Mycobacterium tuberculosis W-148]
gi|424948180|ref|ZP_18363876.1| oligoribonuclease [Mycobacterium tuberculosis NCGM2209]
gi|433627646|ref|YP_007261275.1| Oligoribonuclease Orn [Mycobacterium canettii CIPT 140060008]
gi|433642709|ref|YP_007288468.1| Oligoribonuclease Orn [Mycobacterium canettii CIPT 140070008]
gi|449064584|ref|YP_007431667.1| oligoribonuclease [Mycobacterium bovis BCG str. Korea 1168P]
gi|54038785|sp|P65598.1|ORN_MYCBO RecName: Full=Oligoribonuclease
gi|54041582|sp|P65597.1|ORN_MYCTU RecName: Full=Oligoribonuclease
gi|166216268|sp|A1KLK6.1|ORN_MYCBP RecName: Full=Oligoribonuclease
gi|166216271|sp|A5U5K8.1|ORN_MYCTA RecName: Full=Oligoribonuclease
gi|13882317|gb|AAK46890.1| oligoribonuclease, putative [Mycobacterium tuberculosis CDC1551]
gi|31619284|emb|CAD97400.1| PROBABLE OLIGORIBONUCLEASE ORN [Mycobacterium bovis AF2122/97]
gi|121494041|emb|CAL72519.1| Probable oligoribonuclease orn [Mycobacterium bovis BCG str.
Pasteur 1173P2]
gi|124601699|gb|EAY60709.1| oligoribonuclease orn [Mycobacterium tuberculosis C]
gi|134152323|gb|EBA44368.1| oligoribonuclease orn [Mycobacterium tuberculosis str. Haarlem]
gi|148506499|gb|ABQ74308.1| oligoribonuclease [Mycobacterium tuberculosis H37Ra]
gi|148722235|gb|ABR06860.1| oligoribonuclease orn [Mycobacterium tuberculosis F11]
gi|224774000|dbj|BAH26806.1| oligoribonuclease [Mycobacterium bovis BCG str. Tokyo 172]
gi|253319912|gb|ACT24515.1| oligoribonuclease orn [Mycobacterium tuberculosis KZN 1435]
gi|289416961|gb|EFD14201.1| oligoribonuclease orn [Mycobacterium tuberculosis T46]
gi|289421114|gb|EFD18315.1| oligoribonuclease orn [Mycobacterium tuberculosis CPHL_A]
gi|289539647|gb|EFD44225.1| oligoribonuclease orn [Mycobacterium tuberculosis K85]
gi|289544425|gb|EFD48073.1| oligoribonuclease orn [Mycobacterium tuberculosis T17]
gi|289686821|gb|EFD54309.1| oligoribonuclease [Mycobacterium tuberculosis 02_1987]
gi|289691707|gb|EFD59136.1| oligoribonuclease orn [Mycobacterium tuberculosis T92]
gi|289695207|gb|EFD62636.1| oligoribonuclease orn [Mycobacterium tuberculosis EAS054]
gi|289710185|gb|EFD74201.1| oligoribonuclease orn [Mycobacterium tuberculosis GM 1503]
gi|289714207|gb|EFD78219.1| oligoribonuclease orn [Mycobacterium tuberculosis T85]
gi|298495777|gb|EFI31071.1| oligoribonuclease orn [Mycobacterium tuberculosis 94_M4241A]
gi|308214844|gb|EFO74243.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu001]
gi|308326616|gb|EFP15467.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu002]
gi|308330038|gb|EFP18889.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu003]
gi|308333882|gb|EFP22733.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu004]
gi|308337682|gb|EFP26533.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu005]
gi|308341363|gb|EFP30214.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu006]
gi|308345880|gb|EFP34731.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu007]
gi|308349155|gb|EFP38006.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu008]
gi|308353779|gb|EFP42630.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu009]
gi|308357722|gb|EFP46573.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu010]
gi|308361662|gb|EFP50513.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu011]
gi|308365253|gb|EFP54104.1| oligoribonuclease orn [Mycobacterium tuberculosis SUMu012]
gi|323718919|gb|EGB28073.1| oligoribonuclease orn [Mycobacterium tuberculosis CDC1551A]
gi|326904125|gb|EGE51058.1| oligoribonuclease orn [Mycobacterium tuberculosis W-148]
gi|328458177|gb|AEB03600.1| oligoribonuclease orn [Mycobacterium tuberculosis KZN 4207]
gi|339295394|gb|AEJ47505.1| oligoribonuclease [Mycobacterium tuberculosis CCDC5079]
gi|339299014|gb|AEJ51124.1| oligoribonuclease [Mycobacterium tuberculosis CCDC5180]
gi|339331893|emb|CCC27596.1| oligoribonuclease ORN [Mycobacterium africanum GM041182]
gi|340005715|emb|CCC44881.1| oligoribonuclease ORN [Mycobacterium canettii CIPT 140010059]
gi|341602431|emb|CCC65107.1| probable oligoribonuclease orn [Mycobacterium bovis BCG str. Moreau
RDJ]
gi|344220338|gb|AEN00969.1| oligoribonuclease [Mycobacterium tuberculosis CTRI-2]
gi|356594568|gb|AET19797.1| Oligoribonuclease [Mycobacterium bovis BCG str. Mexico]
gi|358232695|dbj|GAA46187.1| oligoribonuclease [Mycobacterium tuberculosis NCGM2209]
gi|378545700|emb|CCE37978.1| orn [Mycobacterium tuberculosis UT205]
gi|379028814|dbj|BAL66547.1| oligoribonuclease [Mycobacterium tuberculosis str. Erdman = ATCC
35801]
gi|380722239|gb|AFE17348.1| oligoribonuclease [Mycobacterium tuberculosis RGTB327]
gi|380725899|gb|AFE13694.1| oligoribonuclease [Mycobacterium tuberculosis RGTB423]
gi|392053289|gb|AFM48847.1| oligoribonuclease orn [Mycobacterium tuberculosis KZN 605]
gi|395139320|gb|AFN50479.1| oligoribonuclease [Mycobacterium tuberculosis H37Rv]
gi|432155252|emb|CCK52498.1| Oligoribonuclease Orn [Mycobacterium canettii CIPT 140060008]
gi|432159257|emb|CCK56561.1| Oligoribonuclease Orn [Mycobacterium canettii CIPT 140070008]
gi|440581987|emb|CCG12390.1| OLIGORIBONUCLEASE ORN [Mycobacterium tuberculosis 7199-99]
gi|444896044|emb|CCP45305.1| Oligoribonuclease Orn [Mycobacterium tuberculosis H37Rv]
gi|449033092|gb|AGE68519.1| oligoribonuclease [Mycobacterium bovis BCG str. Korea 1168P]
Length = 215
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++ L M + E H+ SGL D V+AS+V + A+ + ++ ++VK PKTAP+ G
Sbjct: 45 MHADDAALSGMIDVVAEMHSRSGLIDEVKASTVDLATAEAMVLDYINEHVKQPKTAPLAG 104
>gi|255942429|ref|XP_002561983.1| Pc18g01380 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211586716|emb|CAP94362.1| Pc18g01380 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 245
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ + L M++WC++ H +GLT VRAS+ S A L ++ ++V P+TA + G
Sbjct: 109 IHVPDSTLDAMSQWCIDTHGRTGLTAAVRASTTSPSTAADSLLAYIRQHVPTPRTALLAG 168
Query: 92 -EYHTSKELL 100
H K L
Sbjct: 169 NSVHADKAFL 178
>gi|344299727|gb|EGW30080.1| hypothetical protein SPAPADRAFT_63701 [Spathaspora passalidarum
NRRL Y-27907]
Length = 255
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 34/60 (56%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRA-SSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+YY +E L MN WC+E H SGLT ++ ++E+ + L +++ KY+ + ++
Sbjct: 84 IYYPKERLDEMNPWCIETHGKSGLTQKILDHPEQTLEKVQRELLEYIKKYIPEQRTGLIA 143
>gi|433631627|ref|YP_007265255.1| Oligoribonuclease Orn [Mycobacterium canettii CIPT 140070010]
gi|432163220|emb|CCK60622.1| Oligoribonuclease Orn [Mycobacterium canettii CIPT 140070010]
Length = 215
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++ L M + E H+ SGL D V+AS+V + A+ + ++ ++VK PKTAP+ G
Sbjct: 45 IHADDAALSGMIDVVAEMHSRSGLIDEVKASTVDLATAEAMVLDYINEHVKQPKTAPLAG 104
>gi|402700131|ref|ZP_10848110.1| oligoribonuclease [Pseudomonas fragi A22]
Length = 180
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+++++ VL M+EW H SGLT RV+ S+ ++ +A+ + F+ ++V +P+
Sbjct: 45 IAIHHSDAVLARMDEWNTRTHGGSGLTQRVKDSTTTMAQAEAQTIAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|432848620|ref|XP_004066436.1| PREDICTED: methyl-CpG-binding domain protein 5-like [Oryzias
latipes]
Length = 1419
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 19/26 (73%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS + LSS+EQVK YL T GTCKCGL
Sbjct: 38 PSGSVLSSLEQVKTYLLTDGTCKCGL 63
>gi|433635592|ref|YP_007269219.1| Oligoribonuclease Orn [Mycobacterium canettii CIPT 140070017]
gi|432167185|emb|CCK64696.1| Oligoribonuclease Orn [Mycobacterium canettii CIPT 140070017]
Length = 215
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++ L M + E H+ SGL D V+AS+V + A+ + ++ ++VK PKTAP+ G
Sbjct: 45 MHADDAALSGMIDVVAEMHSRSGLIDEVKASTVDLATAEAMVLDYINEHVKQPKTAPLAG 104
>gi|50287235|ref|XP_446047.1| hypothetical protein [Candida glabrata CBS 138]
gi|49525354|emb|CAG58971.1| unnamed protein product [Candida glabrata]
Length = 250
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 35/55 (63%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+E L M++WC++HH +SGL D+V AS + E+ ++ L ++ K++ K ++
Sbjct: 89 KEKLDAMDQWCLDHHGSSGLMDKVLASKKTKEQVEEELLNYLQKWIPEKRVGILA 143
>gi|422007133|ref|ZP_16354119.1| oligoribonuclease [Providencia rettgeri Dmel1]
gi|414097023|gb|EKT58678.1| oligoribonuclease [Providencia rettgeri Dmel1]
Length = 181
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ E L M+EW V H SGL +RVR S+VS EA+ +F+ K+V +P+
Sbjct: 46 IAVHQTNEQLALMDEWNVNTHTNSGLVERVRKSTVSEREAELATIEFLEKWVPQGVSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|262045407|ref|ZP_06018430.1| oligoribonuclease [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|330003307|ref|ZP_08304578.1| oligoribonuclease [Klebsiella sp. MS 92-3]
gi|378976565|ref|YP_005224706.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae HS11286]
gi|386032750|ref|YP_005952663.1| oligoribonuclease [Klebsiella pneumoniae KCTC 2242]
gi|419975910|ref|ZP_14491315.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|419980560|ref|ZP_14495844.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|419987003|ref|ZP_14502129.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|419992447|ref|ZP_14507403.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|419999014|ref|ZP_14513795.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|420003718|ref|ZP_14518362.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|420011558|ref|ZP_14526003.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|420015695|ref|ZP_14529994.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|420021129|ref|ZP_14535312.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|420027440|ref|ZP_14541433.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|420033301|ref|ZP_14547107.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|420038005|ref|ZP_14551655.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|420044004|ref|ZP_14557488.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|420049722|ref|ZP_14563028.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|420055316|ref|ZP_14568484.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|420060063|ref|ZP_14573066.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|420067110|ref|ZP_14579906.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|420071751|ref|ZP_14584395.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|420077852|ref|ZP_14590314.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|420082393|ref|ZP_14594691.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|421908958|ref|ZP_16338785.1| 3'-to-5' oligoribonuclease (orn) [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421916593|ref|ZP_16346165.1| 3'-to-5' oligoribonuclease (orn) [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|424828555|ref|ZP_18253283.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae Ecl8]
gi|425078754|ref|ZP_18481857.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|425079494|ref|ZP_18482591.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|425089386|ref|ZP_18492479.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|425094316|ref|ZP_18497399.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|428151777|ref|ZP_18999485.1| 3'-to-5' oligoribonuclease (orn) [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|428933279|ref|ZP_19006836.1| oligoribonuclease [Klebsiella pneumoniae JHCK1]
gi|428936583|ref|ZP_19009977.1| oligoribonuclease [Klebsiella pneumoniae JHCK1]
gi|428938603|ref|ZP_19011728.1| oligoribonuclease [Klebsiella pneumoniae VA360]
gi|428942042|ref|ZP_19015060.1| oligoribonuclease [Klebsiella pneumoniae VA360]
gi|449059422|ref|ZP_21737118.1| oligoribonuclease [Klebsiella pneumoniae hvKP1]
gi|259037236|gb|EEW38484.1| oligoribonuclease [Klebsiella pneumoniae subsp. rhinoscleromatis
ATCC 13884]
gi|328537018|gb|EGF63306.1| oligoribonuclease [Klebsiella sp. MS 92-3]
gi|339759878|gb|AEJ96098.1| oligoribonuclease [Klebsiella pneumoniae KCTC 2242]
gi|364515976|gb|AEW59104.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae HS11286]
gi|397341958|gb|EJJ35128.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH1]
gi|397345758|gb|EJJ38879.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH2]
gi|397346083|gb|EJJ39201.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH4]
gi|397359094|gb|EJJ51798.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH6]
gi|397361118|gb|EJJ53786.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH5]
gi|397369021|gb|EJJ61625.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH7]
gi|397375231|gb|EJJ67529.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH8]
gi|397376229|gb|EJJ68495.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH9]
gi|397387212|gb|EJJ79255.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH10]
gi|397393491|gb|EJJ85249.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH11]
gi|397395285|gb|EJJ86995.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH12]
gi|397404684|gb|EJJ96177.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH14]
gi|397412809|gb|EJK04037.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH17]
gi|397412952|gb|EJK04175.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH16]
gi|397421988|gb|EJK12979.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH18]
gi|397428828|gb|EJK19558.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH20]
gi|397434793|gb|EJK25426.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH19]
gi|397440077|gb|EJK30499.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH21]
gi|397445441|gb|EJK35683.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH22]
gi|397452290|gb|EJK42362.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KPNIH23]
gi|405589555|gb|EKB63120.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae WGLW1]
gi|405599827|gb|EKB73002.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae WGLW3]
gi|405608006|gb|EKB80958.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae WGLW2]
gi|405609948|gb|EKB82785.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae WGLW5]
gi|410117159|emb|CCM81410.1| 3'-to-5' oligoribonuclease (orn) [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410121098|emb|CCM88790.1| 3'-to-5' oligoribonuclease (orn) [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|414705963|emb|CCN27667.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae Ecl8]
gi|426298044|gb|EKV60482.1| oligoribonuclease [Klebsiella pneumoniae JHCK1]
gi|426299399|gb|EKV61738.1| oligoribonuclease [Klebsiella pneumoniae VA360]
gi|426305479|gb|EKV67601.1| oligoribonuclease [Klebsiella pneumoniae VA360]
gi|426305645|gb|EKV67763.1| oligoribonuclease [Klebsiella pneumoniae JHCK1]
gi|427538305|emb|CCM95623.1| 3'-to-5' oligoribonuclease (orn) [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|448874839|gb|EMB09870.1| oligoribonuclease [Klebsiella pneumoniae hvKP1]
Length = 181
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M+EW V H SGL DRV+AS+VS +A+ +F+ ++V +P+ G
Sbjct: 55 LALMDEWNVRTHTGSGLVDRVKASTVSEHDAELATIEFLKQWVPAGKSPICG 106
>gi|260913837|ref|ZP_05920311.1| oligoribonuclease [Pasteurella dagmatis ATCC 43325]
gi|260631924|gb|EEX50101.1| oligoribonuclease [Pasteurella dagmatis ATCC 43325]
Length = 184
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E+L+ M+EWC + H +GL +RV+ S ++ A+ + F+ K+V +P+
Sbjct: 46 LAVHQSDELLRKMSEWCTKTHTENGLVERVKNSKLTERAAELQTIDFLKKWVPKGVSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|425768822|gb|EKV07334.1| RNA exonuclease Rex2, putative [Penicillium digitatum Pd1]
gi|425770155|gb|EKV08628.1| RNA exonuclease Rex2, putative [Penicillium digitatum PHI26]
Length = 171
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ + L M++WC++ H +GLT VRAS+ S A L ++ ++V P+TA + G
Sbjct: 35 IHVPDSTLDAMSQWCIDTHGRTGLTAAVRASTTSPSTAADALLAYIRQHVPVPRTALLAG 94
Query: 92 -EYHTSKELL 100
H K L
Sbjct: 95 NSVHADKAFL 104
>gi|315055429|ref|XP_003177089.1| oligoribonuclease [Arthroderma gypseum CBS 118893]
gi|311338935|gb|EFQ98137.1| oligoribonuclease [Arthroderma gypseum CBS 118893]
Length = 188
Score = 44.7 bits (104), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 40/81 (49%), Gaps = 2/81 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++ +++L MN WC H SGLT V +++ + EEA L ++ ++V K TA + G
Sbjct: 51 VHLPQDILDRMNAWCTATHGRSGLTAAVLSATTTAEEAANGLLAYIKQHVPKQGTALLAG 110
Query: 92 -EYHTSKELLKDSDHFLVFSW 111
H + L + V W
Sbjct: 111 NSVHADRAFLAQPPYVQVLDW 131
>gi|402782842|ref|YP_006638388.1| 3'-to-5' oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae
1084]
gi|402543689|gb|AFQ67838.1| 3'-to-5' oligoribonuclease (orn) [Klebsiella pneumoniae subsp.
pneumoniae 1084]
Length = 181
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M+EW V H SGL DRV+AS+VS +A+ +F+ ++V +P+ G
Sbjct: 55 LALMDEWNVRTHTGSGLVDRVKASTVSEHDAELATIEFLKQWVPAGKSPICG 106
>gi|393775536|ref|ZP_10363849.1| oligoribonuclease [Ralstonia sp. PBA]
gi|392717586|gb|EIZ05147.1| oligoribonuclease [Ralstonia sp. PBA]
Length = 213
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/59 (35%), Positives = 36/59 (61%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +EVL M+ W H SGL D+V+AS+++ +A++ L F+ K+V +PM G
Sbjct: 64 VHQADEVLDGMDAWNKGTHGRSGLIDKVKASTLTEAQAEETLLAFLRKWVPTGKSPMCG 122
>gi|392953599|ref|ZP_10319153.1| oligoribonuclease [Hydrocarboniphaga effusa AP103]
gi|391859114|gb|EIT69643.1| oligoribonuclease [Hydrocarboniphaga effusa AP103]
Length = 184
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +EE L M++W H SGL RVR S + EA+ R F+ ++ P +PM G
Sbjct: 47 AVHQSEEELAAMDDWNTRQHGGSGLAKRVRESHSTEAEAEARTIDFLKQWAVPGRSPMCG 106
>gi|399545802|ref|YP_006559110.1| oligoribonuclease [Marinobacter sp. BSs20148]
gi|399161134|gb|AFP31697.1| Oligoribonuclease [Marinobacter sp. BSs20148]
Length = 180
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++ ++ M+EWC H SGLT RV+ S +S EA+++ F+ ++++ +P+
Sbjct: 45 LAVHQSDTLMGAMDEWCTRTHGESGLTQRVKDSRISEAEAEQQTLAFLREHLESGDSPLC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|206579385|ref|YP_002240881.1| oligoribonuclease [Klebsiella pneumoniae 342]
gi|288937537|ref|YP_003441596.1| exonuclease RNase T and DNA polymerase III [Klebsiella variicola
At-22]
gi|206568443|gb|ACI10219.1| oligoribonuclease [Klebsiella pneumoniae 342]
gi|288892246|gb|ADC60564.1| Exonuclease RNase T and DNA polymerase III [Klebsiella variicola
At-22]
Length = 181
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M+EW V H SGL DRV+AS+VS +A+ +F+ ++V +P+ G
Sbjct: 55 LALMDEWNVRTHTGSGLVDRVKASAVSEHDAELATIEFLKQWVPAGKSPICG 106
>gi|417853565|ref|ZP_12498929.1| oligoribonuclease [Pasteurella multocida subsp. multocida str.
Anand1_goat]
gi|338219325|gb|EGP05003.1| oligoribonuclease [Pasteurella multocida subsp. multocida str.
Anand1_goat]
Length = 184
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L MN+WC++ H +GL +RV+ S ++ A+ + F+ K+V +P+ G
Sbjct: 47 AIHQSDECLAKMNDWCMKTHTENGLVERVKNSRLTERAAELQTLDFLKKWVPKGVSPICG 106
>gi|324509601|gb|ADY44034.1| Oligoribonuclease [Ascaris suum]
Length = 198
Score = 44.3 bits (103), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 33/55 (60%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
E+VL NM+ WC +GL ++R S++SI+ A+ ++ F+ ++ P P+ G
Sbjct: 69 EDVLANMSSWCRSTFARNGLLQKIRESNISIKAAESQVLSFLKEHTDPGKCPLAG 123
>gi|291327132|ref|ZP_06127108.2| oligoribonuclease [Providencia rettgeri DSM 1131]
gi|291311676|gb|EFE52129.1| oligoribonuclease [Providencia rettgeri DSM 1131]
Length = 187
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 34/61 (55%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +E L M+EW V H SGL +RVR S+VS EA+ F+ K+V +P+
Sbjct: 52 IAVHQTDEQLALMDEWNVNTHTNSGLVERVRKSTVSEREAELATIAFLEKWVPQGASPIC 111
Query: 91 G 91
G
Sbjct: 112 G 112
>gi|15602765|ref|NP_245837.1| oligoribonuclease [Pasteurella multocida subsp. multocida str.
Pm70]
gi|378774613|ref|YP_005176856.1| oligoribonuclease [Pasteurella multocida 36950]
gi|383310583|ref|YP_005363393.1| oligoribonuclease [Pasteurella multocida subsp. multocida str.
HN06]
gi|386833947|ref|YP_006239262.1| oligoribonuclease [Pasteurella multocida subsp. multocida str.
3480]
gi|417850853|ref|ZP_12496674.1| oligoribonuclease [Pasteurella multocida subsp. gallicida str.
Anand1_poultry]
gi|421263636|ref|ZP_15714667.1| oligoribonuclease [Pasteurella multocida subsp. multocida str.
P52VAC]
gi|425063589|ref|ZP_18466714.1| 3'-to-5' oligoribonuclease (orn) [Pasteurella multocida subsp.
gallicida X73]
gi|13431730|sp|P57885.1|ORN_PASMU RecName: Full=Oligoribonuclease
gi|12721214|gb|AAK02984.1| unknown [Pasteurella multocida subsp. multocida str. Pm70]
gi|338220282|gb|EGP05822.1| oligoribonuclease [Pasteurella multocida subsp. gallicida str.
Anand1_poultry]
gi|356597161|gb|AET15887.1| oligoribonuclease [Pasteurella multocida 36950]
gi|380871855|gb|AFF24222.1| oligoribonuclease [Pasteurella multocida subsp. multocida str.
HN06]
gi|385200648|gb|AFI45503.1| oligoribonuclease [Pasteurella multocida subsp. multocida str.
3480]
gi|401689322|gb|EJS84785.1| oligoribonuclease [Pasteurella multocida subsp. multocida str.
P52VAC]
gi|404382704|gb|EJZ79162.1| 3'-to-5' oligoribonuclease (orn) [Pasteurella multocida subsp.
gallicida X73]
Length = 184
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 36/60 (60%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L MN+WC++ H +GL +RV+ S ++ A+ + F+ K+V +P+ G
Sbjct: 47 AIHQSDECLAKMNDWCMKTHTENGLVERVKNSRLTERAAELQTLDFLKKWVPKGVSPICG 106
>gi|383861837|ref|XP_003706391.1| PREDICTED: probable oligoribonuclease-like [Megachile rotundata]
Length = 99
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/46 (36%), Positives = 32/46 (69%), Gaps = 1/46 (2%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV 82
+E+L NMN+WC++ H +GL D R+S ++I++A+ + +F K +
Sbjct: 40 DEILNNMNDWCLQTHKKTGLIDASRSSKITIQDAE-HISEFNPKLI 84
>gi|345571483|gb|EGX54297.1| hypothetical protein AOL_s00004g330 [Arthrobotrys oligospora ATCC
24927]
Length = 176
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 35/56 (62%), Gaps = 1/56 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
+ +L M++WC H ++GL RV +S+ ++ EA +L ++ K+V + KTA M G
Sbjct: 39 QSLLSQMDDWCTTTHTSTGLIPRVLSSTTTVTEASNQLLSYIQKHVPEKKTAIMCG 94
>gi|448824051|ref|YP_007417220.1| putative oligoribonuclease [Corynebacterium urealyticum DSM 7111]
gi|448277548|gb|AGE36972.1| putative oligoribonuclease [Corynebacterium urealyticum DSM 7111]
Length = 209
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 41/60 (68%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ E+ L M+++ H SGLT+++R S++S+ EA++++ Q+V +YV+ + AP+ G
Sbjct: 53 IHATEDELAEMDDFVQNMHARSGLTEQIRESTLSLAEAEQQVLQYVQRYVEVERAAPLAG 112
>gi|86739751|ref|YP_480151.1| oligoribonuclease [Frankia sp. CcI3]
gi|86566613|gb|ABD10422.1| Exonuclease [Frankia sp. CcI3]
Length = 250
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 36/56 (64%), Gaps = 1/56 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFV-AKYVKPKTAPMVG 91
EE LQ M E H ASGLT VRAS++S+++A+++L +V + + + AP+ G
Sbjct: 60 EEALQTMEPVVREMHEASGLTAAVRASTLSLDDAERQLLDYVRTRIPEVRKAPLCG 115
>gi|313221865|emb|CBY38931.1| unnamed protein product [Oikopleura dioica]
Length = 196
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 33/52 (63%), Gaps = 2/52 (3%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L+ M WC + H SGLT + R S +++E+ D+ L +F+ K+ PK AP+ G
Sbjct: 58 LKRMGAWCRKTHGESGLTKKCRESHLTLEDGDEILSEFIRKHC-PK-APLAG 107
>gi|145542502|ref|XP_001456938.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124424752|emb|CAK89541.1| unnamed protein product [Paramecium tetraurelia]
Length = 176
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 17/60 (28%), Positives = 40/60 (66%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAK-YVKPKTAPMVG 91
++ + +VL+ M++WC + H ASGL + S++++++A++++ F+ + + PK P+ G
Sbjct: 36 IHADNQVLEGMDQWCTKTHKASGLYEESLKSTLNVQQAEEQILNFLNQNNIPPKVLPLAG 95
>gi|336325168|ref|YP_004605134.1| oligoribonuclease [Corynebacterium resistens DSM 45100]
gi|336101150|gb|AEI08970.1| oligoribonuclease [Corynebacterium resistens DSM 45100]
Length = 215
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 18/60 (30%), Positives = 43/60 (71%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++ L M+++ + HN SGLT++++ SS+S+ EA++++ +++ ++V +TAP+ G
Sbjct: 59 IHATDDELSRMDDFVTKMHNNSGLTNQIKESSLSLAEAEQQVVEYIKQFVPLGRTAPLAG 118
>gi|218551434|ref|YP_002385226.1| oligoribonuclease [Escherichia fergusonii ATCC 35469]
gi|422807064|ref|ZP_16855495.1| exonuclease [Escherichia fergusonii B253]
gi|218358976|emb|CAQ91636.1| oligoribonuclease [Escherichia fergusonii ATCC 35469]
gi|324112239|gb|EGC06217.1| exonuclease [Escherichia fergusonii B253]
Length = 181
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLAMMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|407642785|ref|YP_006806544.1| oligoribonuclease [Nocardia brasiliensis ATCC 700358]
gi|407305669|gb|AFT99569.1| oligoribonuclease [Nocardia brasiliensis ATCC 700358]
Length = 216
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++ L M V+ H SGLT+ VR S+V++ EA++++ ++ +YV P+T P+ G
Sbjct: 46 IHADDAALAAMPPVVVDMHARSGLTEEVRRSAVTMAEAEEQVLDYIRQYVPTPRTVPLAG 105
>gi|402077461|gb|EJT72810.1| oligoribonuclease [Gaeumannomyces graminis var. tritici R3-111a-1]
Length = 198
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 35/62 (56%), Gaps = 1/62 (1%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPM 89
++ +E + M EWC H +GLT+RV AS V+ E A + L ++ K+V +P A +
Sbjct: 47 AAVHLPKERMDQMGEWCTRTHAQTGLTERVLASEVTPERAAEDLLAYIRKHVPEPGVAQL 106
Query: 90 VG 91
G
Sbjct: 107 AG 108
>gi|358391635|gb|EHK41039.1| hypothetical protein TRIATDRAFT_28409 [Trichoderma atroviride IMI
206040]
Length = 191
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 36/64 (56%), Gaps = 2/64 (3%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG-EYHTSK 97
L M+EWC H SGLT V AS + ++A L++++ ++ KP+TA + G H +
Sbjct: 60 LDQMDEWCTNTHGKSGLTAAVIASETTPQQAADGLYRYITTFLPKPRTALLAGNSVHADR 119
Query: 98 ELLK 101
L+
Sbjct: 120 AFLR 123
>gi|443492066|ref|YP_007370213.1| oligoribonuclease Orn [Mycobacterium liflandii 128FXT]
gi|442584563|gb|AGC63706.1| oligoribonuclease Orn [Mycobacterium liflandii 128FXT]
Length = 222
Score = 44.3 bits (103), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 39/60 (65%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++ L +M + + H+ SGLT+ VRAS+V + A+ + ++ ++VK P+TAP+ G
Sbjct: 52 IHADDAALSSMVDVVADMHSRSGLTEEVRASTVDMATAEAMVLDYIGEHVKQPETAPLAG 111
>gi|424935458|ref|ZP_18353830.1| Oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
gi|407809645|gb|EKF80896.1| Oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae KpQ3]
Length = 199
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M+EW V H SGL DRV+AS+VS +A+ +F+ ++V +P+ G
Sbjct: 73 LALMDEWNVRTHTGSGLVDRVKASTVSEHDAELATIEFLKQWVPAGKSPICG 124
>gi|400406159|ref|YP_006588907.1| oligoribonuclease (3'->5' exoribonuclease) [secondary endosymbiont
of Heteropsylla cubana]
gi|400364412|gb|AFP85479.1| oligoribonuclease (3'->5' exoribonuclease) [secondary endosymbiont
of Heteropsylla cubana]
Length = 181
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
+Y +EE L M++W ++ H SGL RVR S E A+ + F +K++ K +P+
Sbjct: 46 LAIYQSEEQLALMDQWNIKTHTDSGLIHRVRKSLFDEEAAEVQTLSFFSKWIHAKKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|299532537|ref|ZP_07045927.1| oligoribonuclease [Comamonas testosteroni S44]
gi|298719484|gb|EFI60451.1| oligoribonuclease [Comamonas testosteroni S44]
Length = 202
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+ W H SGL D+V+AS++S EA+ L F+ KYV P+ G
Sbjct: 68 AIHQSDELLGGMDAWNKGTHGKSGLIDKVKASTISEAEAEAALIAFLGKYVPKGKTPLCG 127
>gi|254468761|ref|ZP_05082167.1| oligoribonuclease [beta proteobacterium KB13]
gi|207087571|gb|EDZ64854.1| oligoribonuclease [beta proteobacterium KB13]
Length = 184
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 33/54 (61%)
Query: 38 EVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
E+L +M+ W H+ SGL D+V+ S ++ A++ L F+++YV +PM G
Sbjct: 53 ELLDSMDAWNTNTHSKSGLIDKVKHSQITENVAERELINFLSQYVDKNKSPMCG 106
>gi|421888867|ref|ZP_16319943.1| oligoribonuclease [Ralstonia solanacearum K60-1]
gi|378965809|emb|CCF96691.1| oligoribonuclease [Ralstonia solanacearum K60-1]
Length = 219
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E+L M+ W H SGL D+V+AS+ + +A+ L F+ K+V +PM G
Sbjct: 70 IHQPDEILDGMDAWNKGTHGRSGLIDKVKASTTTEAQAEADLLDFLKKWVPKSKSPMCG 128
>gi|347832072|emb|CCD47769.1| similar to exonuclease rnase t and DNA polymerase iii [Botryotinia
fuckeliana]
Length = 193
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++ ++E + M+EWC H ++GLT V +S+ + EA + L Q++ +V +P+ A + G
Sbjct: 51 IHQDQETMDKMDEWCTTTHASTGLTSEVLSSTTTPTEAAESLLQYIKSWVPEPRRALLAG 110
Query: 92 -EYHTSKELL 100
H K L
Sbjct: 111 NSVHADKAFL 120
>gi|154314837|ref|XP_001556742.1| hypothetical protein BC1G_04760 [Botryotinia fuckeliana B05.10]
Length = 180
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/70 (31%), Positives = 40/70 (57%), Gaps = 2/70 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++ ++E + M+EWC H ++GLT V +S+ + EA + L Q++ +V +P+ A + G
Sbjct: 38 IHQDQETMDKMDEWCTTTHASTGLTSEVLSSTTTPTEAAESLLQYIKSWVPEPRRALLAG 97
Query: 92 -EYHTSKELL 100
H K L
Sbjct: 98 NSVHADKAFL 107
>gi|300704711|ref|YP_003746314.1| oligoribonuclease [Ralstonia solanacearum CFBP2957]
gi|299072375|emb|CBJ43713.1| oligoribonuclease [Ralstonia solanacearum CFBP2957]
Length = 219
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E+L M+ W H SGL D+V+AS+ + +A+ L F+ K+V +PM G
Sbjct: 70 IHQPDEILDGMDAWNKGTHGRSGLIDKVKASTTTEAQAEADLLDFLKKWVPKSKSPMCG 128
>gi|238892647|ref|YP_002917381.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
gi|238544963|dbj|BAH61314.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae
NTUH-K2044]
Length = 199
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M+EW V H SGL DRV+AS+VS +A+ +F+ ++V +P+ G
Sbjct: 73 LALMDEWNVRTHTGSGLVDRVKASTVSEHDAELATIEFLKQWVPAGKSPICG 124
>gi|221068763|ref|ZP_03544868.1| Exonuclease RNase T and DNA polymerase III [Comamonas testosteroni
KF-1]
gi|220713786|gb|EED69154.1| Exonuclease RNase T and DNA polymerase III [Comamonas testosteroni
KF-1]
Length = 202
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+ W H SGL D+V+AS++S EA+ L F+ KYV P+ G
Sbjct: 68 AIHQSDELLGGMDAWNKGTHGKSGLIDKVKASTISEAEAEAALIAFLGKYVPKGKTPLCG 127
>gi|261342826|ref|ZP_05970684.1| oligoribonuclease [Enterobacter cancerogenus ATCC 35316]
gi|288314868|gb|EFC53806.1| oligoribonuclease [Enterobacter cancerogenus ATCC 35316]
Length = 181
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW V H SGL DRV+AS+ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLALMDEWNVRTHTGSGLVDRVKASTQGDREAELATLEFLKQWVPEGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|121607325|ref|YP_995132.1| oligoribonuclease [Verminephrobacter eiseniae EF01-2]
gi|121551965|gb|ABM56114.1| Exonuclease, RNase T and DNA polymerase III [Verminephrobacter
eiseniae EF01-2]
Length = 195
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 36/59 (61%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M+ W H SGL D+V+AS ++ +A++++ F+++YV PM G
Sbjct: 62 IHQSQEWLDKMDAWNKGTHGRSGLIDKVKASGITEAQAEQQIIAFLSQYVPKGQVPMCG 120
>gi|333902289|ref|YP_004476162.1| oligoribonuclease [Pseudomonas fulva 12-X]
gi|333117554|gb|AEF24068.1| Oligoribonuclease [Pseudomonas fulva 12-X]
Length = 189
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 34/61 (55%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW H SGLT RVR S +S EA+ + F+ ++V +P+
Sbjct: 54 IAVHQSDERLAAMDEWNTRTHGESGLTQRVRDSKISQAEAEAQTIAFLERWVPKGKSPIC 113
Query: 91 G 91
G
Sbjct: 114 G 114
>gi|330501616|ref|YP_004378485.1| oligoribonuclease [Pseudomonas mendocina NK-01]
gi|328915902|gb|AEB56733.1| oligoribonuclease [Pseudomonas mendocina NK-01]
Length = 180
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 32/61 (52%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +EE L M+EW H SGLT RVR S + A+ + F+ ++V +P+
Sbjct: 45 IAIHQSEEALAGMDEWNTRTHGQSGLTQRVRESRIDTAAAEAQTIAFLEQWVPKGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|301608308|ref|XP_002933744.1| PREDICTED: hypothetical protein LOC100485569 [Xenopus (Silurana)
tropicalis]
Length = 1323
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 18/26 (69%), Positives = 22/26 (84%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T L+SM+Q++AYL T GTCKCGL
Sbjct: 39 PSGTVLTSMDQLRAYLVTDGTCKCGL 64
>gi|290512276|ref|ZP_06551643.1| oligoribonuclease [Klebsiella sp. 1_1_55]
gi|289775271|gb|EFD83272.1| oligoribonuclease [Klebsiella sp. 1_1_55]
Length = 199
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M+EW V H SGL DRV+AS+VS +A+ +F+ ++V +P+ G
Sbjct: 73 LALMDEWNVRTHTGSGLVDRVKASAVSEHDAELATIEFLKQWVPAGKSPICG 124
>gi|186910204|ref|NP_001119549.1| methyl-CpG binding domain protein 6 [Xenopus (Silurana)
tropicalis]
gi|183985922|gb|AAI66190.1| mbd6 protein [Xenopus (Silurana) tropicalis]
Length = 1365
Score = 44.3 bits (103), Expect = 0.010, Method: Composition-based stats.
Identities = 18/26 (69%), Positives = 22/26 (84%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T L+SM+Q++AYL T GTCKCGL
Sbjct: 39 PSGTVLTSMDQLRAYLVTDGTCKCGL 64
>gi|264677043|ref|YP_003276949.1| exonuclease, RNase T and DNA polymerase III [Comamonas
testosteroni CNB-2]
gi|418530710|ref|ZP_13096633.1| oligoribonuclease [Comamonas testosteroni ATCC 11996]
gi|262207555|gb|ACY31653.1| Exonuclease, RNase T and DNA polymerase III [Comamonas
testosteroni CNB-2]
gi|371452429|gb|EHN65458.1| oligoribonuclease [Comamonas testosteroni ATCC 11996]
Length = 174
Score = 44.3 bits (103), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 35/60 (58%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E+L M+ W H SGL D+V+AS++S EA+ L F+ KYV P+ G
Sbjct: 40 AIHQSDELLGGMDAWNKGTHGKSGLIDKVKASTISEAEAEAALIAFLGKYVPKGKTPLCG 99
>gi|171463904|ref|YP_001798017.1| oligoribonuclease [Polynucleobacter necessarius subsp. necessarius
STIR1]
gi|171193442|gb|ACB44403.1| Exonuclease RNase T and DNA polymerase III [Polynucleobacter
necessarius subsp. necessarius STIR1]
Length = 198
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 36/72 (50%), Gaps = 1/72 (1%)
Query: 21 AYLQTQGTCKCGLYYNEE-VLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVA 79
A+L T T + + E VL M+ W H SGL D+V+AS++ + F+
Sbjct: 49 AHLNTIATAPVWVMHQENAVLDAMDAWNKGTHGRSGLIDKVKASTLDEAAVEAECIAFLK 108
Query: 80 KYVKPKTAPMVG 91
KY+K APM G
Sbjct: 109 KYIKAGIAPMCG 120
>gi|386288018|ref|ZP_10065184.1| oligoribonuclease [gamma proteobacterium BDW918]
gi|385278997|gb|EIF42943.1| oligoribonuclease [gamma proteobacterium BDW918]
Length = 181
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/60 (33%), Positives = 34/60 (56%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +EVL M+EW H SGL RV+ + ++ EA++ F+ K+V+ +PM G
Sbjct: 46 AIHQPDEVLAAMDEWNTRQHGESGLVKRVQDTCITALEAERLTLAFLDKHVEKGASPMCG 105
>gi|419352736|ref|ZP_13894052.1| oligoribonuclease monomer, partial [Escherichia coli DEC13B]
gi|378194065|gb|EHX54584.1| oligoribonuclease monomer, partial [Escherichia coli DEC13B]
Length = 161
Score = 44.3 bits (103), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|409391085|ref|ZP_11242777.1| oligoribonuclease [Gordonia rubripertincta NBRC 101908]
gi|403198898|dbj|GAB86011.1| oligoribonuclease [Gordonia rubripertincta NBRC 101908]
Length = 199
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++ ++E L +M + + H SGLT+ VRAS+V++ EA+K + ++ K+V P P+ G
Sbjct: 45 IHADDEALASMPDVVTKMHADSGLTEEVRASTVTLVEAEKLVLDYIRKHVTTPGAVPLAG 104
>gi|300692079|ref|YP_003753074.1| oligoribonuclease [Ralstonia solanacearum PSI07]
gi|299079139|emb|CBJ51807.1| oligoribonuclease [Ralstonia solanacearum PSI07]
gi|344174075|emb|CCA85856.1| oligoribonuclease [Ralstonia syzygii R24]
Length = 219
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E+L M+ W H SGL D+V+AS+ + +A+ L F+ K+V +PM G
Sbjct: 70 IHQPDEILDGMDAWNKGTHGRSGLIDKVKASTTTEAQAEADLLDFLKKWVPKSKSPMCG 128
>gi|419145302|ref|ZP_13690022.1| oligoribonuclease [Escherichia coli DEC6A]
gi|419151362|ref|ZP_13696003.1| oligoribonuclease monomer [Escherichia coli DEC6B]
gi|377987126|gb|EHV50314.1| oligoribonuclease monomer [Escherichia coli DEC6B]
gi|377987799|gb|EHV50983.1| oligoribonuclease [Escherichia coli DEC6A]
Length = 181
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELSTLEFLKQWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|17545661|ref|NP_519063.1| oligoribonuclease [Ralstonia solanacearum GMI1000]
gi|21263804|sp|Q8Y0V1.1|ORN_RALSO RecName: Full=Oligoribonuclease
gi|17427954|emb|CAD14644.1| probable oligoribonuclease protein [Ralstonia solanacearum GMI1000]
Length = 219
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E+L M+ W H SGL D+V+AS+ + +A+ L F+ K+V +PM G
Sbjct: 70 IHQPDEILDGMDAWNKGTHGRSGLIDKVKASTTTEAQAEADLLDFLKKWVPKSKSPMCG 128
>gi|440638570|gb|ELR08489.1| hypothetical protein GMDG_00553 [Geomyces destructans 20631-21]
Length = 197
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 2/73 (2%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPM 89
C ++ ++E + M+EWC + H +GLT V AS+ + E A L +V KYV +P+ A +
Sbjct: 49 CTVHQSKERMDQMDEWCTKTHGETGLTSAVIASTTTAEVAAAELLAYVKKYVPEPRIALL 108
Query: 90 VG-EYHTSKELLK 101
G H K L+
Sbjct: 109 AGNSVHADKAFLR 121
>gi|91213714|ref|YP_543700.1| oligoribonuclease [Escherichia coli UTI89]
gi|237703830|ref|ZP_04534311.1| oligoribonuclease [Escherichia sp. 3_2_53FAA]
gi|332280947|ref|ZP_08393360.1| oligoribonuclease [Shigella sp. D9]
gi|386278835|ref|ZP_10056528.1| oligoribonuclease [Escherichia sp. 4_1_40B]
gi|26111489|gb|AAN83671.1|AE016771_182 Oligoribonuclease [Escherichia coli CFT073]
gi|91075288|gb|ABE10169.1| oligoribonuclease [Escherichia coli UTI89]
gi|226901742|gb|EEH88001.1| oligoribonuclease [Escherichia sp. 3_2_53FAA]
gi|332103299|gb|EGJ06645.1| oligoribonuclease [Shigella sp. D9]
gi|386124026|gb|EIG72610.1| oligoribonuclease [Escherichia sp. 4_1_40B]
Length = 220
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 85 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 144
Query: 91 G 91
G
Sbjct: 145 G 145
>gi|344170700|emb|CCA83126.1| oligoribonuclease [blood disease bacterium R229]
Length = 219
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +E+L M+ W H SGL D+V+AS+ + +A+ L F+ K+V +PM G
Sbjct: 70 IHQPDEILDGMDAWNKGTHGRSGLIDKVKASTTTEAQAEADLLDFLKKWVPKSKSPMCG 128
>gi|417692714|ref|ZP_12341905.1| exonuclease family protein [Shigella boydii 5216-82]
gi|332083162|gb|EGI88393.1| exonuclease family protein [Shigella boydii 5216-82]
Length = 181
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|417584574|ref|ZP_12235358.1| exonuclease family protein [Escherichia coli STEC_C165-02]
gi|419919372|ref|ZP_14437528.1| oligoribonuclease [Escherichia coli KD2]
gi|432491998|ref|ZP_19733851.1| oligoribonuclease [Escherichia coli KTE213]
gi|432716796|ref|ZP_19951805.1| oligoribonuclease [Escherichia coli KTE9]
gi|432837263|ref|ZP_20070761.1| oligoribonuclease [Escherichia coli KTE140]
gi|433205926|ref|ZP_20389658.1| oligoribonuclease [Escherichia coli KTE95]
gi|345342757|gb|EGW75149.1| exonuclease family protein [Escherichia coli STEC_C165-02]
gi|388388053|gb|EIL49650.1| oligoribonuclease [Escherichia coli KD2]
gi|431015732|gb|ELD29282.1| oligoribonuclease [Escherichia coli KTE213]
gi|431269176|gb|ELF60535.1| oligoribonuclease [Escherichia coli KTE9]
gi|431393076|gb|ELG76641.1| oligoribonuclease [Escherichia coli KTE140]
gi|431714519|gb|ELJ78705.1| oligoribonuclease [Escherichia coli KTE95]
Length = 181
Score = 43.9 bits (102), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|110346113|gb|ABG72350.1| oligoribonuclease [Escherichia coli 536]
Length = 229
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 94 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 153
Query: 91 G 91
G
Sbjct: 154 G 154
>gi|438000066|ref|YP_007183799.1| oligoribonuclease [Candidatus Kinetoplastibacterium blastocrithidii
(ex Strigomonas culicis)]
gi|451812996|ref|YP_007449449.1| oligoribonuclease [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
gi|429339300|gb|AFZ83722.1| oligoribonuclease [Candidatus Kinetoplastibacterium blastocrithidii
(ex Strigomonas culicis)]
gi|451778965|gb|AGF49845.1| oligoribonuclease [Candidatus Kinetoplastibacterium blastocrithidii
TCC012E]
Length = 181
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 18/54 (33%), Positives = 34/54 (62%)
Query: 38 EVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
E+L++M++W H+ SGL D+V +S +S +EA+ + F+ Y+ +P+ G
Sbjct: 53 EILESMDKWNKSVHSKSGLVDKVLSSEISEKEAEDNILLFLENYINSGVSPLCG 106
>gi|366157935|ref|ZP_09457797.1| oligoribonuclease [Escherichia sp. TW09308]
gi|432374735|ref|ZP_19617760.1| oligoribonuclease [Escherichia coli KTE11]
gi|430892874|gb|ELC15358.1| oligoribonuclease [Escherichia coli KTE11]
Length = 181
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|417710388|ref|ZP_12359398.1| exonuclease family protein [Shigella flexneri K-272]
gi|417720272|ref|ZP_12369145.1| exonuclease family protein [Shigella flexneri K-227]
gi|417830793|ref|ZP_12477328.1| oligoribonuclease monomer [Shigella flexneri J1713]
gi|420323392|ref|ZP_14825207.1| oligoribonuclease [Shigella flexneri 2850-71]
gi|333011146|gb|EGK30560.1| exonuclease family protein [Shigella flexneri K-272]
gi|333012659|gb|EGK32039.1| exonuclease family protein [Shigella flexneri K-227]
gi|335572734|gb|EGM59105.1| oligoribonuclease monomer [Shigella flexneri J1713]
gi|391243637|gb|EIQ02929.1| oligoribonuclease [Shigella flexneri 2850-71]
Length = 181
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|161984789|ref|YP_410541.2| oligoribonuclease [Shigella boydii Sb227]
gi|416293171|ref|ZP_11650358.1| 3'-to-5' oligoribonuclease (orn) [Shigella flexneri CDC 796-83]
gi|416303328|ref|ZP_11653556.1| 3'-to-5' oligoribonuclease (orn) [Shigella flexneri CDC 796-83]
gi|417685015|ref|ZP_12334345.1| exonuclease family protein [Shigella boydii 3594-74]
gi|420328565|ref|ZP_14830294.1| oligoribonuclease [Shigella flexneri CCH060]
gi|420355971|ref|ZP_14857018.1| oligoribonuclease [Shigella boydii 4444-74]
gi|421685646|ref|ZP_16125417.1| oligoribonuclease monomer [Shigella flexneri 1485-80]
gi|320183731|gb|EFW58568.1| 3'-to-5' oligoribonuclease (orn) [Shigella flexneri CDC 796-83]
gi|320187043|gb|EFW61754.1| 3'-to-5' oligoribonuclease (orn) [Shigella flexneri CDC 796-83]
gi|332087020|gb|EGI92154.1| exonuclease family protein [Shigella boydii 3594-74]
gi|391243807|gb|EIQ03098.1| oligoribonuclease [Shigella flexneri CCH060]
gi|391269706|gb|EIQ28605.1| oligoribonuclease [Shigella boydii 4444-74]
gi|404334542|gb|EJZ61023.1| oligoribonuclease monomer [Shigella flexneri 1485-80]
Length = 181
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|389626611|ref|XP_003710959.1| oligoribonuclease [Magnaporthe oryzae 70-15]
gi|351650488|gb|EHA58347.1| oligoribonuclease [Magnaporthe oryzae 70-15]
Length = 256
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV 82
++ +E + M+EWC + H SGLT RV S+ + EEA L ++ K+V
Sbjct: 82 VHQTQERMDKMDEWCTKQHGGSGLTARVVGSTTTPEEAADGLLAYIKKHV 131
>gi|209921653|ref|YP_002295737.1| oligoribonuclease [Escherichia coli SE11]
gi|416343324|ref|ZP_11677328.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli EC4100B]
gi|419348046|ref|ZP_13889404.1| oligoribonuclease monomer [Escherichia coli DEC13A]
gi|419352493|ref|ZP_13893814.1| oligoribonuclease monomer [Escherichia coli DEC13B]
gi|419358021|ref|ZP_13899258.1| oligoribonuclease monomer [Escherichia coli DEC13C]
gi|419362985|ref|ZP_13904184.1| oligoribonuclease monomer [Escherichia coli DEC13D]
gi|419368082|ref|ZP_13909220.1| oligoribonuclease monomer [Escherichia coli DEC13E]
gi|432811910|ref|ZP_20045762.1| oligoribonuclease [Escherichia coli KTE101]
gi|433094561|ref|ZP_20280802.1| oligoribonuclease [Escherichia coli KTE138]
gi|209914912|dbj|BAG79986.1| oligoribonuclease [Escherichia coli SE11]
gi|320200705|gb|EFW75291.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli EC4100B]
gi|378181112|gb|EHX41787.1| oligoribonuclease monomer [Escherichia coli DEC13A]
gi|378194123|gb|EHX54639.1| oligoribonuclease monomer [Escherichia coli DEC13C]
gi|378195048|gb|EHX55556.1| oligoribonuclease monomer [Escherichia coli DEC13B]
gi|378196316|gb|EHX56803.1| oligoribonuclease monomer [Escherichia coli DEC13D]
gi|378207448|gb|EHX67841.1| oligoribonuclease monomer [Escherichia coli DEC13E]
gi|431358666|gb|ELG45317.1| oligoribonuclease [Escherichia coli KTE101]
gi|431605292|gb|ELI74683.1| oligoribonuclease [Escherichia coli KTE138]
Length = 181
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|170766878|ref|ZP_02901331.1| oligoribonuclease [Escherichia albertii TW07627]
gi|415775928|ref|ZP_11487612.1| exonuclease family protein [Escherichia coli 3431]
gi|170124316|gb|EDS93247.1| oligoribonuclease [Escherichia albertii TW07627]
gi|315617577|gb|EFU98183.1| exonuclease family protein [Escherichia coli 3431]
Length = 181
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|90111697|ref|NP_418586.4| oligoribonuclease [Escherichia coli str. K-12 substr. MG1655]
gi|157155866|ref|YP_001465662.1| oligoribonuclease [Escherichia coli E24377A]
gi|157163628|ref|YP_001460946.1| oligoribonuclease [Escherichia coli HS]
gi|161486014|ref|NP_757097.2| oligoribonuclease [Escherichia coli CFT073]
gi|161949984|ref|YP_405804.2| oligoribonuclease [Shigella dysenteriae Sd197]
gi|161986383|ref|YP_313069.2| oligoribonuclease [Shigella sonnei Ss046]
gi|170021825|ref|YP_001726779.1| oligoribonuclease [Escherichia coli ATCC 8739]
gi|170083611|ref|YP_001732931.1| oligoribonuclease [Escherichia coli str. K-12 substr. DH10B]
gi|170681955|ref|YP_001746560.1| oligoribonuclease [Escherichia coli SMS-3-5]
gi|187730220|ref|YP_001882856.1| oligoribonuclease [Shigella boydii CDC 3083-94]
gi|188495936|ref|ZP_03003206.1| oligoribonuclease [Escherichia coli 53638]
gi|191165629|ref|ZP_03027469.1| oligoribonuclease [Escherichia coli B7A]
gi|193065728|ref|ZP_03046792.1| oligoribonuclease [Escherichia coli E22]
gi|194428928|ref|ZP_03061461.1| oligoribonuclease [Escherichia coli B171]
gi|194437211|ref|ZP_03069309.1| oligoribonuclease [Escherichia coli 101-1]
gi|215489509|ref|YP_002331940.1| oligoribonuclease [Escherichia coli O127:H6 str. E2348/69]
gi|218556717|ref|YP_002389631.1| oligoribonuclease [Escherichia coli IAI1]
gi|218561324|ref|YP_002394237.1| oligoribonuclease [Escherichia coli S88]
gi|218692499|ref|YP_002400711.1| oligoribonuclease [Escherichia coli ED1a]
gi|218697914|ref|YP_002405581.1| oligoribonuclease [Escherichia coli 55989]
gi|218702862|ref|YP_002410491.1| oligoribonuclease [Escherichia coli IAI39]
gi|218707776|ref|YP_002415295.1| oligoribonuclease [Escherichia coli UMN026]
gi|222158930|ref|YP_002559069.1| Oligoribonuclease [Escherichia coli LF82]
gi|229560203|ref|YP_672251.2| oligoribonuclease [Escherichia coli 536]
gi|229775946|ref|YP_859834.2| oligoribonuclease [Escherichia coli APEC O1]
gi|238903272|ref|YP_002929068.1| oligoribonuclease [Escherichia coli BW2952]
gi|251787415|ref|YP_003001719.1| oligoribonuclease monomer, subunit of oligoribonuclease
[Escherichia coli BL21(DE3)]
gi|253775210|ref|YP_003038041.1| oligoribonuclease [Escherichia coli 'BL21-Gold(DE3)pLysS AG']
gi|254164094|ref|YP_003047202.1| oligoribonuclease [Escherichia coli B str. REL606]
gi|254290844|ref|YP_003056592.1| oligoribonuclease [Escherichia coli BL21(DE3)]
gi|260846995|ref|YP_003224773.1| oligoribonuclease Orn [Escherichia coli O103:H2 str. 12009]
gi|260858318|ref|YP_003232209.1| oligoribonuclease [Escherichia coli O26:H11 str. 11368]
gi|260870927|ref|YP_003237329.1| oligoribonuclease Orn [Escherichia coli O111:H- str. 11128]
gi|293402792|ref|ZP_06646889.1| oligoribonuclease [Escherichia coli FVEC1412]
gi|293407892|ref|ZP_06651732.1| oligoribonuclease [Escherichia coli B354]
gi|293417668|ref|ZP_06660290.1| orn oligoribonuclease [Escherichia coli B185]
gi|293476475|ref|ZP_06664883.1| orn [Escherichia coli B088]
gi|297518431|ref|ZP_06936817.1| oligoribonuclease [Escherichia coli OP50]
gi|298378322|ref|ZP_06988206.1| oligoribonuclease [Escherichia coli FVEC1302]
gi|301027985|ref|ZP_07191269.1| exonuclease [Escherichia coli MS 196-1]
gi|306815620|ref|ZP_07449769.1| oligoribonuclease [Escherichia coli NC101]
gi|307312001|ref|ZP_07591638.1| Exonuclease RNase T and DNA polymerase III [Escherichia coli W]
gi|309787669|ref|ZP_07682280.1| exonuclease family protein [Shigella dysenteriae 1617]
gi|312965838|ref|ZP_07780064.1| exonuclease family protein [Escherichia coli 2362-75]
gi|312974028|ref|ZP_07788199.1| exonuclease family protein [Escherichia coli 1827-70]
gi|331644912|ref|ZP_08346029.1| oligoribonuclease [Escherichia coli H736]
gi|331650290|ref|ZP_08351362.1| oligoribonuclease [Escherichia coli M605]
gi|331655993|ref|ZP_08356981.1| oligoribonuclease [Escherichia coli M718]
gi|331660740|ref|ZP_08361672.1| oligoribonuclease [Escherichia coli TA206]
gi|331671070|ref|ZP_08371903.1| oligoribonuclease [Escherichia coli TA271]
gi|331671316|ref|ZP_08372114.1| oligoribonuclease [Escherichia coli TA280]
gi|331680295|ref|ZP_08380954.1| oligoribonuclease [Escherichia coli H591]
gi|331681184|ref|ZP_08381821.1| oligoribonuclease [Escherichia coli H299]
gi|378714881|ref|YP_005279774.1| Exonuclease RNase T and DNA polymerase III [Escherichia coli
KO11FL]
gi|383181495|ref|YP_005459500.1| oligoribonuclease [Shigella sonnei 53G]
gi|386597319|ref|YP_006093719.1| Exonuclease RNase T and DNA polymerase III [Escherichia coli DH1]
gi|386602228|ref|YP_006103734.1| oligoribonuclease [Escherichia coli IHE3034]
gi|386606752|ref|YP_006113052.1| oligoribonuclease [Escherichia coli UM146]
gi|386611562|ref|YP_006127048.1| oligoribonuclease [Escherichia coli W]
gi|386617072|ref|YP_006136738.1| hypothetical protein UMNK88_5100 [Escherichia coli UMNK88]
gi|386621921|ref|YP_006141501.1| 3'-to-5' oligoribonuclease [Escherichia coli NA114]
gi|386627128|ref|YP_006146856.1| oligoribonuclease [Escherichia coli O7:K1 str. CE10]
gi|386632172|ref|YP_006151892.1| oligoribonuclease [Escherichia coli str. 'clone D i2']
gi|386637092|ref|YP_006156811.1| oligoribonuclease [Escherichia coli str. 'clone D i14']
gi|386641840|ref|YP_006108638.1| oligoribonuclease [Escherichia coli ABU 83972]
gi|386702965|ref|YP_006166802.1| oligoribonuclease [Escherichia coli KO11FL]
gi|386712107|ref|YP_006175828.1| oligoribonuclease [Escherichia coli W]
gi|387610047|ref|YP_006098903.1| oligoribonuclease [Escherichia coli 042]
gi|387614934|ref|YP_006118050.1| oligoribonuclease [Escherichia coli ETEC H10407]
gi|387619553|ref|YP_006122575.1| oligoribonuclease [Escherichia coli O83:H1 str. NRG 857C]
gi|387623795|ref|YP_006131423.1| oligoribonuclease [Escherichia coli DH1]
gi|388480112|ref|YP_492307.1| oligoribonuclease [Escherichia coli str. K-12 substr. W3110]
gi|404373089|ref|ZP_10978362.1| oligoribonuclease [Escherichia sp. 1_1_43]
gi|407467211|ref|YP_006786347.1| oligoribonuclease [Escherichia coli O104:H4 str. 2009EL-2071]
gi|407484070|ref|YP_006781220.1| oligoribonuclease [Escherichia coli O104:H4 str. 2011C-3493]
gi|410484613|ref|YP_006772159.1| oligoribonuclease [Escherichia coli O104:H4 str. 2009EL-2050]
gi|415784778|ref|ZP_11492555.1| exonuclease family protein [Escherichia coli EPECa14]
gi|415813698|ref|ZP_11505428.1| exonuclease family protein [Escherichia coli LT-68]
gi|415823576|ref|ZP_11511951.1| exonuclease family protein [Escherichia coli OK1180]
gi|415831997|ref|ZP_11517548.1| exonuclease family protein [Escherichia coli OK1357]
gi|415838035|ref|ZP_11520018.1| exonuclease family protein [Escherichia coli RN587/1]
gi|415848582|ref|ZP_11526217.1| exonuclease family protein [Shigella sonnei 53G]
gi|416274052|ref|ZP_11643507.1| 3'-to-5' oligoribonuclease (orn) [Shigella dysenteriae CDC 74-1112]
gi|416338933|ref|ZP_11674934.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli WV_060327]
gi|416900894|ref|ZP_11930026.1| exonuclease family protein [Escherichia coli STEC_7v]
gi|417088442|ref|ZP_11955108.1| oligoribonuclease [Escherichia coli cloneA_i1]
gi|417118273|ref|ZP_11968849.1| oligoribonuclease [Escherichia coli 1.2741]
gi|417127816|ref|ZP_11975256.1| oligoribonuclease [Escherichia coli 97.0246]
gi|417132842|ref|ZP_11977627.1| oligoribonuclease [Escherichia coli 5.0588]
gi|417139918|ref|ZP_11983265.1| oligoribonuclease [Escherichia coli 97.0259]
gi|417149575|ref|ZP_11989666.1| oligoribonuclease [Escherichia coli 1.2264]
gi|417156433|ref|ZP_11994057.1| oligoribonuclease [Escherichia coli 96.0497]
gi|417160099|ref|ZP_11997018.1| oligoribonuclease [Escherichia coli 99.0741]
gi|417173578|ref|ZP_12003374.1| oligoribonuclease [Escherichia coli 3.2608]
gi|417184709|ref|ZP_12010306.1| oligoribonuclease [Escherichia coli 93.0624]
gi|417190154|ref|ZP_12013045.1| oligoribonuclease [Escherichia coli 4.0522]
gi|417208128|ref|ZP_12020148.1| oligoribonuclease [Escherichia coli JB1-95]
gi|417225070|ref|ZP_12028361.1| oligoribonuclease [Escherichia coli 96.154]
gi|417230867|ref|ZP_12032283.1| oligoribonuclease [Escherichia coli 5.0959]
gi|417244656|ref|ZP_12038599.1| oligoribonuclease [Escherichia coli 9.0111]
gi|417252406|ref|ZP_12044165.1| oligoribonuclease [Escherichia coli 4.0967]
gi|417261100|ref|ZP_12048593.1| oligoribonuclease [Escherichia coli 2.3916]
gi|417269835|ref|ZP_12057195.1| oligoribonuclease [Escherichia coli 3.3884]
gi|417273657|ref|ZP_12061002.1| oligoribonuclease [Escherichia coli 2.4168]
gi|417278932|ref|ZP_12066245.1| oligoribonuclease [Escherichia coli 3.2303]
gi|417281417|ref|ZP_12068717.1| oligoribonuclease [Escherichia coli 3003]
gi|417287777|ref|ZP_12075063.1| oligoribonuclease [Escherichia coli TW07793]
gi|417293401|ref|ZP_12080680.1| oligoribonuclease [Escherichia coli B41]
gi|417297931|ref|ZP_12085174.1| oligoribonuclease [Escherichia coli 900105 (10e)]
gi|417310789|ref|ZP_12097593.1| Oligoribonuclease [Escherichia coli PCN033]
gi|417583837|ref|ZP_12234631.1| exonuclease family protein [Escherichia coli STEC_B2F1]
gi|417594725|ref|ZP_12245410.1| exonuclease family protein [Escherichia coli 2534-86]
gi|417599620|ref|ZP_12250237.1| exonuclease family protein [Escherichia coli 3030-1]
gi|417605143|ref|ZP_12255699.1| exonuclease family protein [Escherichia coli STEC_94C]
gi|417605666|ref|ZP_12256200.1| exonuclease family protein [Escherichia coli STEC_DG131-3]
gi|417616016|ref|ZP_12266458.1| exonuclease family protein [Escherichia coli STEC_EH250]
gi|417620874|ref|ZP_12271270.1| exonuclease family protein [Escherichia coli G58-1]
gi|417626479|ref|ZP_12276761.1| exonuclease family protein [Escherichia coli STEC_H.1.8]
gi|417632176|ref|ZP_12282400.1| exonuclease family protein [Escherichia coli STEC_S1191]
gi|417642208|ref|ZP_12292329.1| exonuclease family protein [Escherichia coli TX1999]
gi|417664833|ref|ZP_12314412.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli AA86]
gi|417669791|ref|ZP_12319320.1| exonuclease family protein [Escherichia coli STEC_O31]
gi|417758742|ref|ZP_12406796.1| oligoribonuclease monomer [Escherichia coli DEC2B]
gi|417807927|ref|ZP_12454849.1| oligoribonuclease [Escherichia coli O104:H4 str. LB226692]
gi|417835661|ref|ZP_12482097.1| oligoribonuclease [Escherichia coli O104:H4 str. 01-09591]
gi|417864731|ref|ZP_12509777.1| orn [Escherichia coli O104:H4 str. C227-11]
gi|417944530|ref|ZP_12587772.1| oligoribonuclease [Escherichia coli XH140A]
gi|417976308|ref|ZP_12617102.1| oligoribonuclease [Escherichia coli XH001]
gi|418271084|ref|ZP_12888564.1| oligoribonuclease monomer [Shigella sonnei str. Moseley]
gi|418305801|ref|ZP_12917595.1| exonuclease family protein [Escherichia coli UMNF18]
gi|418942895|ref|ZP_13496135.1| oligoribonuclease [Escherichia coli O157:H43 str. T22]
gi|418999770|ref|ZP_13547340.1| oligoribonuclease monomer [Escherichia coli DEC1A]
gi|419005101|ref|ZP_13552602.1| oligoribonuclease monomer [Escherichia coli DEC1B]
gi|419010758|ref|ZP_13558158.1| oligoribonuclease monomer [Escherichia coli DEC1C]
gi|419011343|ref|ZP_13558713.1| oligoribonuclease [Escherichia coli DEC1D]
gi|419021390|ref|ZP_13568680.1| oligoribonuclease monomer [Escherichia coli DEC1E]
gi|419026864|ref|ZP_13574070.1| oligoribonuclease [Escherichia coli DEC2A]
gi|419032064|ref|ZP_13579195.1| oligoribonuclease monomer [Escherichia coli DEC2C]
gi|419037591|ref|ZP_13584657.1| oligoribonuclease monomer [Escherichia coli DEC2D]
gi|419042723|ref|ZP_13589730.1| oligoribonuclease monomer [Escherichia coli DEC2E]
gi|419156730|ref|ZP_13701276.1| oligoribonuclease [Escherichia coli DEC6C]
gi|419162062|ref|ZP_13706548.1| oligoribonuclease [Escherichia coli DEC6D]
gi|419167149|ref|ZP_13711591.1| oligoribonuclease monomer [Escherichia coli DEC6E]
gi|419173164|ref|ZP_13717029.1| oligoribonuclease [Escherichia coli DEC7A]
gi|419177936|ref|ZP_13721735.1| oligoribonuclease monomer [Escherichia coli DEC7B]
gi|419183737|ref|ZP_13727317.1| oligoribonuclease monomer [Escherichia coli DEC7C]
gi|419189338|ref|ZP_13732834.1| oligoribonuclease monomer [Escherichia coli DEC7D]
gi|419194468|ref|ZP_13737901.1| oligoribonuclease [Escherichia coli DEC7E]
gi|419200011|ref|ZP_13743291.1| oligoribonuclease [Escherichia coli DEC8A]
gi|419206396|ref|ZP_13749540.1| oligoribonuclease monomer [Escherichia coli DEC8B]
gi|419212901|ref|ZP_13755954.1| oligoribonuclease monomer [Escherichia coli DEC8C]
gi|419218659|ref|ZP_13761642.1| oligoribonuclease monomer [Escherichia coli DEC8D]
gi|419224356|ref|ZP_13767258.1| oligoribonuclease monomer [Escherichia coli DEC8E]
gi|419229959|ref|ZP_13772782.1| oligoribonuclease monomer [Escherichia coli DEC9A]
gi|419235554|ref|ZP_13778311.1| oligoribonuclease monomer [Escherichia coli DEC9B]
gi|419240758|ref|ZP_13783455.1| oligoribonuclease monomer [Escherichia coli DEC9C]
gi|419246469|ref|ZP_13789093.1| oligoribonuclease monomer [Escherichia coli DEC9D]
gi|419252202|ref|ZP_13794760.1| oligoribonuclease monomer [Escherichia coli DEC9E]
gi|419257973|ref|ZP_13800463.1| oligoribonuclease monomer [Escherichia coli DEC10A]
gi|419264153|ref|ZP_13806553.1| oligoribonuclease monomer [Escherichia coli DEC10B]
gi|419270095|ref|ZP_13812434.1| oligoribonuclease monomer [Escherichia coli DEC10C]
gi|419275635|ref|ZP_13817916.1| oligoribonuclease monomer [Escherichia coli DEC10D]
gi|419281013|ref|ZP_13823246.1| oligoribonuclease monomer [Escherichia coli DEC10E]
gi|419281387|ref|ZP_13823612.1| oligoribonuclease monomer [Escherichia coli DEC10F]
gi|419292412|ref|ZP_13834490.1| oligoribonuclease monomer [Escherichia coli DEC11A]
gi|419297763|ref|ZP_13839791.1| oligoribonuclease monomer [Escherichia coli DEC11B]
gi|419303230|ref|ZP_13845215.1| oligoribonuclease [Escherichia coli DEC11C]
gi|419309286|ref|ZP_13851168.1| oligoribonuclease [Escherichia coli DEC11D]
gi|419314241|ref|ZP_13856092.1| oligoribonuclease [Escherichia coli DEC11E]
gi|419319804|ref|ZP_13861593.1| oligoribonuclease [Escherichia coli DEC12A]
gi|419326091|ref|ZP_13867768.1| oligoribonuclease monomer [Escherichia coli DEC12B]
gi|419331929|ref|ZP_13873514.1| oligoribonuclease [Escherichia coli DEC12C]
gi|419337581|ref|ZP_13879080.1| oligoribonuclease monomer [Escherichia coli DEC12D]
gi|419342849|ref|ZP_13884293.1| oligoribonuclease monomer [Escherichia coli DEC12E]
gi|419372820|ref|ZP_13913918.1| oligoribonuclease [Escherichia coli DEC14A]
gi|419378458|ref|ZP_13919464.1| oligoribonuclease monomer [Escherichia coli DEC14B]
gi|419383823|ref|ZP_13924753.1| oligoribonuclease monomer [Escherichia coli DEC14C]
gi|419389057|ref|ZP_13929910.1| oligoribonuclease monomer [Escherichia coli DEC14D]
gi|419394500|ref|ZP_13935291.1| oligoribonuclease monomer [Escherichia coli DEC15A]
gi|419399634|ref|ZP_13940388.1| oligoribonuclease monomer [Escherichia coli DEC15B]
gi|419404882|ref|ZP_13945593.1| oligoribonuclease monomer [Escherichia coli DEC15C]
gi|419410038|ref|ZP_13950717.1| oligoribonuclease monomer [Escherichia coli DEC15D]
gi|419415602|ref|ZP_13956228.1| oligoribonuclease monomer [Escherichia coli DEC15E]
gi|419703048|ref|ZP_14230628.1| oligoribonuclease [Escherichia coli SCI-07]
gi|419810429|ref|ZP_14335310.1| oligoribonuclease [Escherichia coli O32:H37 str. P4]
gi|419866657|ref|ZP_14389009.1| oligoribonuclease [Escherichia coli O103:H25 str. CVM9340]
gi|419868925|ref|ZP_14391162.1| oligoribonuclease [Escherichia coli O103:H2 str. CVM9450]
gi|419875596|ref|ZP_14397432.1| oligoribonuclease [Escherichia coli O111:H11 str. CVM9534]
gi|419885913|ref|ZP_14406573.1| oligoribonuclease [Escherichia coli O111:H11 str. CVM9545]
gi|419887976|ref|ZP_14408517.1| oligoribonuclease [Escherichia coli O111:H8 str. CVM9570]
gi|419895061|ref|ZP_14414923.1| oligoribonuclease [Escherichia coli O111:H8 str. CVM9574]
gi|419901432|ref|ZP_14420780.1| oligoribonuclease [Escherichia coli O26:H11 str. CVM9942]
gi|419908032|ref|ZP_14426789.1| Exonuclease RNase T and DNA polymerase III [Escherichia coli
O26:H11 str. CVM10026]
gi|419921725|ref|ZP_14439764.1| oligoribonuclease [Escherichia coli 541-15]
gi|419929821|ref|ZP_14447485.1| oligoribonuclease [Escherichia coli 541-1]
gi|419935695|ref|ZP_14452764.1| oligoribonuclease [Escherichia coli 576-1]
gi|419938345|ref|ZP_14455182.1| oligoribonuclease [Escherichia coli 75]
gi|419942914|ref|ZP_14459493.1| oligoribonuclease [Escherichia coli HM605]
gi|419951106|ref|ZP_14467303.1| oligoribonuclease [Escherichia coli CUMT8]
gi|420089302|ref|ZP_14601117.1| oligoribonuclease [Escherichia coli O111:H8 str. CVM9602]
gi|420097524|ref|ZP_14608821.1| oligoribonuclease [Escherichia coli O111:H8 str. CVM9634]
gi|420101180|ref|ZP_14612304.1| oligoribonuclease [Escherichia coli O111:H11 str. CVM9455]
gi|420108145|ref|ZP_14618433.1| oligoribonuclease [Escherichia coli O111:H11 str. CVM9553]
gi|420114868|ref|ZP_14624478.1| oligoribonuclease [Escherichia coli O26:H11 str. CVM10021]
gi|420120003|ref|ZP_14629235.1| oligoribonuclease [Escherichia coli O26:H11 str. CVM10030]
gi|420127822|ref|ZP_14636413.1| oligoribonuclease [Escherichia coli O26:H11 str. CVM10224]
gi|420133350|ref|ZP_14641597.1| oligoribonuclease [Escherichia coli O26:H11 str. CVM9952]
gi|420339047|ref|ZP_14840598.1| oligoribonuclease [Shigella flexneri K-315]
gi|420356264|ref|ZP_14857291.1| oligoribonuclease [Shigella sonnei 3226-85]
gi|420366300|ref|ZP_14867151.1| oligoribonuclease monomer [Shigella sonnei 4822-66]
gi|420383355|ref|ZP_14882771.1| oligoribonuclease [Shigella dysenteriae 225-75]
gi|420388568|ref|ZP_14887892.1| oligoribonuclease [Escherichia coli EPECa12]
gi|420394352|ref|ZP_14893588.1| oligoribonuclease monomer [Escherichia coli EPEC C342-62]
gi|421776296|ref|ZP_16212901.1| exonuclease [Escherichia coli AD30]
gi|422331286|ref|ZP_16412302.1| oligoribonuclease [Escherichia coli 4_1_47FAA]
gi|422750866|ref|ZP_16804776.1| exonuclease [Escherichia coli H252]
gi|422756058|ref|ZP_16809881.1| exonuclease [Escherichia coli H263]
gi|422761476|ref|ZP_16815234.1| exonuclease [Escherichia coli E1167]
gi|422768042|ref|ZP_16821767.1| exonuclease [Escherichia coli E1520]
gi|422772724|ref|ZP_16826411.1| exonuclease [Escherichia coli E482]
gi|422776365|ref|ZP_16830019.1| exonuclease [Escherichia coli H120]
gi|422788021|ref|ZP_16840758.1| exonuclease [Escherichia coli H489]
gi|422792969|ref|ZP_16845667.1| exonuclease [Escherichia coli TA007]
gi|422801880|ref|ZP_16850375.1| exonuclease [Escherichia coli M863]
gi|422815776|ref|ZP_16863991.1| oligoribonuclease [Escherichia coli M919]
gi|422829244|ref|ZP_16877412.1| oligoribonuclease [Escherichia coli B093]
gi|422832567|ref|ZP_16880636.1| oligoribonuclease [Escherichia coli E101]
gi|422840296|ref|ZP_16888267.1| oligoribonuclease [Escherichia coli H397]
gi|422957869|ref|ZP_16970083.1| oligoribonuclease [Escherichia coli H494]
gi|422972449|ref|ZP_16975276.1| oligoribonuclease [Escherichia coli TA124]
gi|422990466|ref|ZP_16981237.1| oligoribonuclease [Escherichia coli O104:H4 str. C227-11]
gi|422992405|ref|ZP_16983169.1| oligoribonuclease [Escherichia coli O104:H4 str. C236-11]
gi|422997625|ref|ZP_16988381.1| oligoribonuclease [Escherichia coli O104:H4 str. 09-7901]
gi|423006114|ref|ZP_16996858.1| oligoribonuclease [Escherichia coli O104:H4 str. 04-8351]
gi|423007720|ref|ZP_16998458.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-3677]
gi|423021905|ref|ZP_17012608.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4404]
gi|423027059|ref|ZP_17017752.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4522]
gi|423032896|ref|ZP_17023580.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4623]
gi|423035763|ref|ZP_17026437.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4632 C1]
gi|423040881|ref|ZP_17031548.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4632 C2]
gi|423047570|ref|ZP_17038227.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4632 C3]
gi|423056108|ref|ZP_17044913.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4632 C4]
gi|423058118|ref|ZP_17046914.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4632 C5]
gi|423700532|ref|ZP_17674991.1| oligoribonuclease [Escherichia coli H730]
gi|423709514|ref|ZP_17683868.1| oligoribonuclease [Escherichia coli B799]
gi|424750400|ref|ZP_18178465.1| oligoribonuclease [Escherichia coli O26:H11 str. CFSAN001629]
gi|424755542|ref|ZP_18183413.1| oligoribonuclease [Escherichia coli O111:H11 str. CFSAN001630]
gi|424771082|ref|ZP_18198244.1| oligoribonuclease [Escherichia coli O111:H8 str. CFSAN001632]
gi|425117806|ref|ZP_18519573.1| oligoribonuclease [Escherichia coli 8.0566]
gi|425122522|ref|ZP_18524185.1| oligoribonuclease [Escherichia coli 8.0569]
gi|425275542|ref|ZP_18666912.1| oligoribonuclease [Escherichia coli TW15901]
gi|425280642|ref|ZP_18671850.1| oligoribonuclease [Escherichia coli ARS4.2123]
gi|425284673|ref|ZP_18675704.1| oligoribonuclease [Escherichia coli TW00353]
gi|425303114|ref|ZP_18692986.1| oligoribonuclease [Escherichia coli 07798]
gi|425308017|ref|ZP_18697669.1| oligoribonuclease [Escherichia coli N1]
gi|425382638|ref|ZP_18766603.1| oligoribonuclease [Escherichia coli EC1865]
gi|425425223|ref|ZP_18806360.1| oligoribonuclease [Escherichia coli 0.1288]
gi|429721955|ref|ZP_19256862.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-9450]
gi|429774036|ref|ZP_19306043.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02030]
gi|429779216|ref|ZP_19311176.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02033-1]
gi|429783056|ref|ZP_19314973.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02092]
gi|429788690|ref|ZP_19320568.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02093]
gi|429794893|ref|ZP_19326724.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02281]
gi|429800845|ref|ZP_19332627.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02318]
gi|429804478|ref|ZP_19336227.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02913]
gi|429809286|ref|ZP_19340992.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-03439]
gi|429815048|ref|ZP_19346710.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-04080]
gi|429820257|ref|ZP_19351875.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-03943]
gi|429906311|ref|ZP_19372281.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-9990]
gi|429910455|ref|ZP_19376412.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-9941]
gi|429916348|ref|ZP_19382289.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-4984]
gi|429921386|ref|ZP_19387308.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-5604]
gi|429927202|ref|ZP_19393109.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-4986]
gi|429931136|ref|ZP_19397032.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-4987]
gi|429937680|ref|ZP_19403561.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-4988]
gi|429938395|ref|ZP_19404269.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-5603]
gi|429946034|ref|ZP_19411890.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-6006]
gi|429948681|ref|ZP_19414529.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec12-0465]
gi|429956948|ref|ZP_19422777.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec12-0466]
gi|432351350|ref|ZP_19594667.1| oligoribonuclease [Escherichia coli KTE2]
gi|432360733|ref|ZP_19603938.1| oligoribonuclease [Escherichia coli KTE4]
gi|432367758|ref|ZP_19610867.1| oligoribonuclease [Escherichia coli KTE10]
gi|432379404|ref|ZP_19622381.1| oligoribonuclease [Escherichia coli KTE12]
gi|432384222|ref|ZP_19627139.1| oligoribonuclease [Escherichia coli KTE15]
gi|432385111|ref|ZP_19628014.1| oligoribonuclease [Escherichia coli KTE16]
gi|432394962|ref|ZP_19637770.1| oligoribonuclease [Escherichia coli KTE21]
gi|432395601|ref|ZP_19638396.1| oligoribonuclease [Escherichia coli KTE25]
gi|432404558|ref|ZP_19647296.1| oligoribonuclease [Escherichia coli KTE26]
gi|432409287|ref|ZP_19651984.1| oligoribonuclease [Escherichia coli KTE28]
gi|432409702|ref|ZP_19652391.1| oligoribonuclease [Escherichia coli KTE39]
gi|432414715|ref|ZP_19657356.1| oligoribonuclease [Escherichia coli KTE44]
gi|432419817|ref|ZP_19662379.1| oligoribonuclease [Escherichia coli KTE178]
gi|432428825|ref|ZP_19671298.1| oligoribonuclease [Escherichia coli KTE181]
gi|432429948|ref|ZP_19672399.1| oligoribonuclease [Escherichia coli KTE187]
gi|432434330|ref|ZP_19676745.1| oligoribonuclease [Escherichia coli KTE188]
gi|432443801|ref|ZP_19686122.1| oligoribonuclease [Escherichia coli KTE189]
gi|432444138|ref|ZP_19686453.1| oligoribonuclease [Escherichia coli KTE191]
gi|432452479|ref|ZP_19694729.1| oligoribonuclease [Escherichia coli KTE193]
gi|432454439|ref|ZP_19696655.1| oligoribonuclease [Escherichia coli KTE201]
gi|432463566|ref|ZP_19705693.1| oligoribonuclease [Escherichia coli KTE204]
gi|432468656|ref|ZP_19710725.1| oligoribonuclease [Escherichia coli KTE205]
gi|432473552|ref|ZP_19715584.1| oligoribonuclease [Escherichia coli KTE206]
gi|432478522|ref|ZP_19720502.1| oligoribonuclease [Escherichia coli KTE208]
gi|432479126|ref|ZP_19721093.1| oligoribonuclease [Escherichia coli KTE210]
gi|432487966|ref|ZP_19729866.1| oligoribonuclease [Escherichia coli KTE212]
gi|432493522|ref|ZP_19735345.1| oligoribonuclease [Escherichia coli KTE214]
gi|432502797|ref|ZP_19744541.1| oligoribonuclease [Escherichia coli KTE216]
gi|432516674|ref|ZP_19753884.1| oligoribonuclease [Escherichia coli KTE224]
gi|432520372|ref|ZP_19757546.1| oligoribonuclease [Escherichia coli KTE228]
gi|432521925|ref|ZP_19759073.1| oligoribonuclease [Escherichia coli KTE230]
gi|432529073|ref|ZP_19766136.1| oligoribonuclease [Escherichia coli KTE233]
gi|432532007|ref|ZP_19769020.1| oligoribonuclease [Escherichia coli KTE234]
gi|432540540|ref|ZP_19777427.1| oligoribonuclease [Escherichia coli KTE235]
gi|432546022|ref|ZP_19782839.1| oligoribonuclease [Escherichia coli KTE236]
gi|432551503|ref|ZP_19788246.1| oligoribonuclease [Escherichia coli KTE237]
gi|432551791|ref|ZP_19788525.1| oligoribonuclease [Escherichia coli KTE47]
gi|432556728|ref|ZP_19793429.1| oligoribonuclease [Escherichia coli KTE49]
gi|432561662|ref|ZP_19798298.1| oligoribonuclease [Escherichia coli KTE51]
gi|432566623|ref|ZP_19803157.1| oligoribonuclease [Escherichia coli KTE53]
gi|432571508|ref|ZP_19808004.1| oligoribonuclease [Escherichia coli KTE55]
gi|432578472|ref|ZP_19814912.1| oligoribonuclease [Escherichia coli KTE56]
gi|432580980|ref|ZP_19817400.1| oligoribonuclease [Escherichia coli KTE57]
gi|432586044|ref|ZP_19822421.1| oligoribonuclease [Escherichia coli KTE58]
gi|432595566|ref|ZP_19831861.1| oligoribonuclease [Escherichia coli KTE62]
gi|432605649|ref|ZP_19841852.1| oligoribonuclease [Escherichia coli KTE67]
gi|432614267|ref|ZP_19850414.1| oligoribonuclease [Escherichia coli KTE72]
gi|432619551|ref|ZP_19855640.1| oligoribonuclease [Escherichia coli KTE75]
gi|432624626|ref|ZP_19860630.1| oligoribonuclease [Escherichia coli KTE76]
gi|432625339|ref|ZP_19861332.1| oligoribonuclease [Escherichia coli KTE77]
gi|432634164|ref|ZP_19870076.1| oligoribonuclease [Escherichia coli KTE80]
gi|432635075|ref|ZP_19870967.1| oligoribonuclease [Escherichia coli KTE81]
gi|432643756|ref|ZP_19879572.1| oligoribonuclease [Escherichia coli KTE83]
gi|432648868|ref|ZP_19884648.1| oligoribonuclease [Escherichia coli KTE86]
gi|432658437|ref|ZP_19894127.1| oligoribonuclease [Escherichia coli KTE93]
gi|432659009|ref|ZP_19894678.1| oligoribonuclease [Escherichia coli KTE111]
gi|432663879|ref|ZP_19899485.1| oligoribonuclease [Escherichia coli KTE116]
gi|432668603|ref|ZP_19904164.1| oligoribonuclease [Escherichia coli KTE119]
gi|432677345|ref|ZP_19912782.1| oligoribonuclease [Escherichia coli KTE142]
gi|432683643|ref|ZP_19918971.1| oligoribonuclease [Escherichia coli KTE156]
gi|432689492|ref|ZP_19924750.1| oligoribonuclease [Escherichia coli KTE161]
gi|432697082|ref|ZP_19932268.1| oligoribonuclease [Escherichia coli KTE162]
gi|432701802|ref|ZP_19936940.1| oligoribonuclease [Escherichia coli KTE169]
gi|432702332|ref|ZP_19937465.1| oligoribonuclease [Escherichia coli KTE171]
gi|432708602|ref|ZP_19943673.1| oligoribonuclease [Escherichia coli KTE6]
gi|432716058|ref|ZP_19951078.1| oligoribonuclease [Escherichia coli KTE8]
gi|432721359|ref|ZP_19956291.1| oligoribonuclease [Escherichia coli KTE17]
gi|432725757|ref|ZP_19960662.1| oligoribonuclease [Escherichia coli KTE18]
gi|432730504|ref|ZP_19965367.1| oligoribonuclease [Escherichia coli KTE45]
gi|432735216|ref|ZP_19970023.1| oligoribonuclease [Escherichia coli KTE42]
gi|432739538|ref|ZP_19974262.1| oligoribonuclease [Escherichia coli KTE23]
gi|432748260|ref|ZP_19982916.1| oligoribonuclease [Escherichia coli KTE43]
gi|432752615|ref|ZP_19987189.1| oligoribonuclease [Escherichia coli KTE29]
gi|432757233|ref|ZP_19991771.1| oligoribonuclease [Escherichia coli KTE22]
gi|432762053|ref|ZP_19996521.1| oligoribonuclease [Escherichia coli KTE46]
gi|432763068|ref|ZP_19997526.1| oligoribonuclease [Escherichia coli KTE48]
gi|432768540|ref|ZP_20002925.1| oligoribonuclease [Escherichia coli KTE50]
gi|432772933|ref|ZP_20007239.1| oligoribonuclease [Escherichia coli KTE54]
gi|432776603|ref|ZP_20010863.1| oligoribonuclease [Escherichia coli KTE59]
gi|432790304|ref|ZP_20024427.1| oligoribonuclease [Escherichia coli KTE65]
gi|432790945|ref|ZP_20025062.1| oligoribonuclease [Escherichia coli KTE78]
gi|432796934|ref|ZP_20030964.1| oligoribonuclease [Escherichia coli KTE79]
gi|432808407|ref|ZP_20042317.1| oligoribonuclease [Escherichia coli KTE91]
gi|432817994|ref|ZP_20051721.1| oligoribonuclease [Escherichia coli KTE115]
gi|432819070|ref|ZP_20052787.1| oligoribonuclease [Escherichia coli KTE118]
gi|432825198|ref|ZP_20058858.1| oligoribonuclease [Escherichia coli KTE123]
gi|432829773|ref|ZP_20063385.1| oligoribonuclease [Escherichia coli KTE135]
gi|432832828|ref|ZP_20066378.1| oligoribonuclease [Escherichia coli KTE136]
gi|432842046|ref|ZP_20075478.1| oligoribonuclease [Escherichia coli KTE141]
gi|432856408|ref|ZP_20083848.1| oligoribonuclease [Escherichia coli KTE144]
gi|432857804|ref|ZP_20084594.1| oligoribonuclease [Escherichia coli KTE146]
gi|432872199|ref|ZP_20092078.1| oligoribonuclease [Escherichia coli KTE147]
gi|432878812|ref|ZP_20096009.1| oligoribonuclease [Escherichia coli KTE154]
gi|432883096|ref|ZP_20098626.1| oligoribonuclease [Escherichia coli KTE158]
gi|432892039|ref|ZP_20104518.1| oligoribonuclease [Escherichia coli KTE165]
gi|432896266|ref|ZP_20107476.1| oligoribonuclease [Escherichia coli KTE192]
gi|432901977|ref|ZP_20111798.1| oligoribonuclease [Escherichia coli KTE194]
gi|432909073|ref|ZP_20116579.1| oligoribonuclease [Escherichia coli KTE190]
gi|432916392|ref|ZP_20121364.1| oligoribonuclease [Escherichia coli KTE173]
gi|432923766|ref|ZP_20126273.1| oligoribonuclease [Escherichia coli KTE175]
gi|432931995|ref|ZP_20131936.1| oligoribonuclease [Escherichia coli KTE184]
gi|432941231|ref|ZP_20138914.1| oligoribonuclease [Escherichia coli KTE183]
gi|432944050|ref|ZP_20140695.1| oligoribonuclease [Escherichia coli KTE196]
gi|432951762|ref|ZP_20145157.1| oligoribonuclease [Escherichia coli KTE197]
gi|432958180|ref|ZP_20149322.1| oligoribonuclease [Escherichia coli KTE202]
gi|432965927|ref|ZP_20154847.1| oligoribonuclease [Escherichia coli KTE203]
gi|432969891|ref|ZP_20158776.1| oligoribonuclease [Escherichia coli KTE207]
gi|432976488|ref|ZP_20165316.1| oligoribonuclease [Escherichia coli KTE209]
gi|432979086|ref|ZP_20167880.1| oligoribonuclease [Escherichia coli KTE211]
gi|432988045|ref|ZP_20176750.1| oligoribonuclease [Escherichia coli KTE215]
gi|432988705|ref|ZP_20177380.1| oligoribonuclease [Escherichia coli KTE217]
gi|432993504|ref|ZP_20182128.1| oligoribonuclease [Escherichia coli KTE218]
gi|433003209|ref|ZP_20191711.1| oligoribonuclease [Escherichia coli KTE227]
gi|433010481|ref|ZP_20198887.1| oligoribonuclease [Escherichia coli KTE229]
gi|433016543|ref|ZP_20204858.1| oligoribonuclease [Escherichia coli KTE104]
gi|433021418|ref|ZP_20209486.1| oligoribonuclease [Escherichia coli KTE105]
gi|433026121|ref|ZP_20214079.1| oligoribonuclease [Escherichia coli KTE106]
gi|433031136|ref|ZP_20218971.1| oligoribonuclease [Escherichia coli KTE109]
gi|433036131|ref|ZP_20223808.1| oligoribonuclease [Escherichia coli KTE112]
gi|433041220|ref|ZP_20228798.1| oligoribonuclease [Escherichia coli KTE113]
gi|433045708|ref|ZP_20233174.1| oligoribonuclease [Escherichia coli KTE117]
gi|433050642|ref|ZP_20237950.1| oligoribonuclease [Escherichia coli KTE120]
gi|433055792|ref|ZP_20242934.1| oligoribonuclease [Escherichia coli KTE122]
gi|433060743|ref|ZP_20247763.1| oligoribonuclease [Escherichia coli KTE124]
gi|433065637|ref|ZP_20252530.1| oligoribonuclease [Escherichia coli KTE125]
gi|433070570|ref|ZP_20257322.1| oligoribonuclease [Escherichia coli KTE128]
gi|433075550|ref|ZP_20262174.1| oligoribonuclease [Escherichia coli KTE129]
gi|433080415|ref|ZP_20266923.1| oligoribonuclease [Escherichia coli KTE131]
gi|433085143|ref|ZP_20271577.1| oligoribonuclease [Escherichia coli KTE133]
gi|433089948|ref|ZP_20276296.1| oligoribonuclease [Escherichia coli KTE137]
gi|433099052|ref|ZP_20285208.1| oligoribonuclease [Escherichia coli KTE139]
gi|433103815|ref|ZP_20289872.1| oligoribonuclease [Escherichia coli KTE145]
gi|433108509|ref|ZP_20294456.1| oligoribonuclease [Escherichia coli KTE148]
gi|433113487|ref|ZP_20299324.1| oligoribonuclease [Escherichia coli KTE150]
gi|433118153|ref|ZP_20303922.1| oligoribonuclease [Escherichia coli KTE153]
gi|433122879|ref|ZP_20308524.1| oligoribonuclease [Escherichia coli KTE157]
gi|433132758|ref|ZP_20318171.1| oligoribonuclease [Escherichia coli KTE163]
gi|433137428|ref|ZP_20322745.1| oligoribonuclease [Escherichia coli KTE166]
gi|433146854|ref|ZP_20331972.1| oligoribonuclease [Escherichia coli KTE168]
gi|433156450|ref|ZP_20341366.1| oligoribonuclease [Escherichia coli KTE176]
gi|433161329|ref|ZP_20346133.1| oligoribonuclease [Escherichia coli KTE177]
gi|433166238|ref|ZP_20350955.1| oligoribonuclease [Escherichia coli KTE179]
gi|433171251|ref|ZP_20355858.1| oligoribonuclease [Escherichia coli KTE180]
gi|433176107|ref|ZP_20360599.1| oligoribonuclease [Escherichia coli KTE232]
gi|433181035|ref|ZP_20365398.1| oligoribonuclease [Escherichia coli KTE82]
gi|433186043|ref|ZP_20370265.1| oligoribonuclease [Escherichia coli KTE85]
gi|433191011|ref|ZP_20375086.1| oligoribonuclease [Escherichia coli KTE88]
gi|433196247|ref|ZP_20380202.1| oligoribonuclease [Escherichia coli KTE90]
gi|433200976|ref|ZP_20384847.1| oligoribonuclease [Escherichia coli KTE94]
gi|433210409|ref|ZP_20394061.1| oligoribonuclease [Escherichia coli KTE97]
gi|433215251|ref|ZP_20398812.1| oligoribonuclease [Escherichia coli KTE99]
gi|433326552|ref|ZP_20403358.1| oligoribonuclease [Escherichia coli J96]
gi|442590500|ref|ZP_21009265.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|442598993|ref|ZP_21016730.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
gi|443615678|ref|YP_007379534.1| oligoribonuclease [Escherichia coli APEC O78]
gi|450197117|ref|ZP_21892974.1| oligoribonuclease [Escherichia coli SEPT362]
gi|450230079|ref|ZP_21897945.1| oligoribonuclease [Escherichia coli O08]
gi|450254795|ref|ZP_21902644.1| oligoribonuclease [Escherichia coli S17]
gi|67469688|sp|P0A784.2|ORN_ECOLI RecName: Full=Oligoribonuclease
gi|67469689|sp|P0A785.2|ORN_ECOL6 RecName: Full=Oligoribonuclease
gi|166918637|sp|A7ZV33.1|ORN_ECO24 RecName: Full=Oligoribonuclease
gi|166918638|sp|A8A7Q9.1|ORN_ECOHS RecName: Full=Oligoribonuclease
gi|85676916|dbj|BAE78166.1| oligoribonuclease [Escherichia coli str. K12 substr. W3110]
gi|87082382|gb|AAC77122.2| oligoribonuclease [Escherichia coli str. K-12 substr. MG1655]
gi|157069308|gb|ABV08563.1| oligoribonuclease [Escherichia coli HS]
gi|157077896|gb|ABV17604.1| oligoribonuclease [Escherichia coli E24377A]
gi|169756753|gb|ACA79452.1| Exonuclease RNase T and DNA polymerase III [Escherichia coli ATCC
8739]
gi|169891446|gb|ACB05153.1| oligoribonuclease [Escherichia coli str. K-12 substr. DH10B]
gi|170519673|gb|ACB17851.1| oligoribonuclease [Escherichia coli SMS-3-5]
gi|187427212|gb|ACD06486.1| oligoribonuclease [Shigella boydii CDC 3083-94]
gi|188491135|gb|EDU66238.1| oligoribonuclease [Escherichia coli 53638]
gi|190904324|gb|EDV64033.1| oligoribonuclease [Escherichia coli B7A]
gi|192926597|gb|EDV81227.1| oligoribonuclease [Escherichia coli E22]
gi|194412981|gb|EDX29270.1| oligoribonuclease [Escherichia coli B171]
gi|194423767|gb|EDX39756.1| oligoribonuclease [Escherichia coli 101-1]
gi|215267581|emb|CAS12036.1| oligoribonuclease [Escherichia coli O127:H6 str. E2348/69]
gi|218354646|emb|CAV01632.1| oligoribonuclease [Escherichia coli 55989]
gi|218363486|emb|CAR01140.1| oligoribonuclease [Escherichia coli IAI1]
gi|218368093|emb|CAR05900.1| oligoribonuclease [Escherichia coli S88]
gi|218372848|emb|CAR20727.1| oligoribonuclease [Escherichia coli IAI39]
gi|218430063|emb|CAR10906.1| oligoribonuclease [Escherichia coli ED1a]
gi|218434873|emb|CAR15811.1| oligoribonuclease [Escherichia coli UMN026]
gi|222035935|emb|CAP78680.1| Oligoribonuclease [Escherichia coli LF82]
gi|238861937|gb|ACR63935.1| oligoribonuclease [Escherichia coli BW2952]
gi|242379688|emb|CAQ34511.1| oligoribonuclease monomer, subunit of oligoribonuclease
[Escherichia coli BL21(DE3)]
gi|253326254|gb|ACT30856.1| Exonuclease RNase T and DNA polymerase III [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253975995|gb|ACT41666.1| oligoribonuclease [Escherichia coli B str. REL606]
gi|253980151|gb|ACT45821.1| oligoribonuclease [Escherichia coli BL21(DE3)]
gi|257756967|dbj|BAI28469.1| oligoribonuclease Orn [Escherichia coli O26:H11 str. 11368]
gi|257762142|dbj|BAI33639.1| oligoribonuclease Orn [Escherichia coli O103:H2 str. 12009]
gi|257767283|dbj|BAI38778.1| oligoribonuclease Orn [Escherichia coli O111:H- str. 11128]
gi|260451008|gb|ACX41430.1| Exonuclease RNase T and DNA polymerase III [Escherichia coli DH1]
gi|284924347|emb|CBG37463.1| oligoribonuclease [Escherichia coli 042]
gi|291320928|gb|EFE60370.1| orn [Escherichia coli B088]
gi|291429707|gb|EFF02721.1| oligoribonuclease [Escherichia coli FVEC1412]
gi|291430386|gb|EFF03384.1| orn oligoribonuclease [Escherichia coli B185]
gi|291472143|gb|EFF14625.1| oligoribonuclease [Escherichia coli B354]
gi|294490725|gb|ADE89481.1| oligoribonuclease [Escherichia coli IHE3034]
gi|298280656|gb|EFI22157.1| oligoribonuclease [Escherichia coli FVEC1302]
gi|299878895|gb|EFI87106.1| exonuclease [Escherichia coli MS 196-1]
gi|305851282|gb|EFM51737.1| oligoribonuclease [Escherichia coli NC101]
gi|306907808|gb|EFN38309.1| Exonuclease RNase T and DNA polymerase III [Escherichia coli W]
gi|307556332|gb|ADN49107.1| oligoribonuclease [Escherichia coli ABU 83972]
gi|307629236|gb|ADN73540.1| oligoribonuclease [Escherichia coli UM146]
gi|308924419|gb|EFP69915.1| exonuclease family protein [Shigella dysenteriae 1617]
gi|309704670|emb|CBJ04020.1| oligoribonuclease [Escherichia coli ETEC H10407]
gi|310331562|gb|EFP98818.1| exonuclease family protein [Escherichia coli 1827-70]
gi|312289081|gb|EFR16975.1| exonuclease family protein [Escherichia coli 2362-75]
gi|312948814|gb|ADR29641.1| oligoribonuclease [Escherichia coli O83:H1 str. NRG 857C]
gi|315063479|gb|ADT77806.1| oligoribonuclease [Escherichia coli W]
gi|315138719|dbj|BAJ45878.1| oligoribonuclease [Escherichia coli DH1]
gi|320173681|gb|EFW48871.1| 3'-to-5' oligoribonuclease (orn) [Shigella dysenteriae CDC 74-1112]
gi|320193545|gb|EFW68182.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli WV_060327]
gi|323156018|gb|EFZ42180.1| exonuclease family protein [Escherichia coli EPECa14]
gi|323166646|gb|EFZ52404.1| exonuclease family protein [Shigella sonnei 53G]
gi|323171596|gb|EFZ57242.1| exonuclease family protein [Escherichia coli LT-68]
gi|323176077|gb|EFZ61669.1| exonuclease family protein [Escherichia coli OK1180]
gi|323182271|gb|EFZ67681.1| exonuclease family protein [Escherichia coli OK1357]
gi|323189956|gb|EFZ75234.1| exonuclease family protein [Escherichia coli RN587/1]
gi|323380442|gb|ADX52710.1| Exonuclease RNase T and DNA polymerase III [Escherichia coli
KO11FL]
gi|323935480|gb|EGB31818.1| exonuclease [Escherichia coli E1520]
gi|323940084|gb|EGB36278.1| exonuclease [Escherichia coli E482]
gi|323946101|gb|EGB42137.1| exonuclease [Escherichia coli H120]
gi|323950766|gb|EGB46644.1| exonuclease [Escherichia coli H252]
gi|323955595|gb|EGB51358.1| exonuclease [Escherichia coli H263]
gi|323960351|gb|EGB55990.1| exonuclease [Escherichia coli H489]
gi|323965551|gb|EGB61005.1| exonuclease [Escherichia coli M863]
gi|323970580|gb|EGB65839.1| exonuclease [Escherichia coli TA007]
gi|324118730|gb|EGC12622.1| exonuclease [Escherichia coli E1167]
gi|327250105|gb|EGE61824.1| exonuclease family protein [Escherichia coli STEC_7v]
gi|330908507|gb|EGH37026.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli AA86]
gi|331035887|gb|EGI08125.1| oligoribonuclease [Escherichia coli H736]
gi|331040684|gb|EGI12842.1| oligoribonuclease [Escherichia coli M605]
gi|331046347|gb|EGI18437.1| oligoribonuclease [Escherichia coli M718]
gi|331051782|gb|EGI23821.1| oligoribonuclease [Escherichia coli TA206]
gi|331061659|gb|EGI33585.1| oligoribonuclease [Escherichia coli TA271]
gi|331071161|gb|EGI42518.1| oligoribonuclease [Escherichia coli TA280]
gi|331071758|gb|EGI43094.1| oligoribonuclease [Escherichia coli H591]
gi|331081405|gb|EGI52566.1| oligoribonuclease [Escherichia coli H299]
gi|332346241|gb|AEE59575.1| conserved hypothetical protein [Escherichia coli UMNK88]
gi|333972422|gb|AEG39227.1| 3'-to-5' oligoribonuclease [Escherichia coli NA114]
gi|338767599|gb|EGP22415.1| Oligoribonuclease [Escherichia coli PCN033]
gi|339417899|gb|AEJ59571.1| exonuclease family protein [Escherichia coli UMNF18]
gi|340731623|gb|EGR60765.1| oligoribonuclease [Escherichia coli O104:H4 str. 01-09591]
gi|340737425|gb|EGR71684.1| oligoribonuclease [Escherichia coli O104:H4 str. LB226692]
gi|341918020|gb|EGT67635.1| orn [Escherichia coli O104:H4 str. C227-11]
gi|342363813|gb|EGU27918.1| oligoribonuclease [Escherichia coli XH140A]
gi|344194010|gb|EGV48086.1| oligoribonuclease [Escherichia coli XH001]
gi|345330999|gb|EGW63462.1| exonuclease family protein [Escherichia coli 2534-86]
gi|345332068|gb|EGW64526.1| exonuclease family protein [Escherichia coli STEC_B2F1]
gi|345345423|gb|EGW77761.1| exonuclease family protein [Escherichia coli STEC_94C]
gi|345347085|gb|EGW79400.1| exonuclease family protein [Escherichia coli 3030-1]
gi|345355875|gb|EGW88083.1| exonuclease family protein [Escherichia coli STEC_EH250]
gi|345366520|gb|EGW98609.1| exonuclease family protein [Escherichia coli STEC_DG131-3]
gi|345368539|gb|EGX00537.1| exonuclease family protein [Escherichia coli G58-1]
gi|345369371|gb|EGX01355.1| exonuclease family protein [Escherichia coli STEC_H.1.8]
gi|345389016|gb|EGX18823.1| exonuclease family protein [Escherichia coli TX1999]
gi|345391694|gb|EGX21480.1| exonuclease family protein [Escherichia coli STEC_S1191]
gi|349740864|gb|AEQ15570.1| oligoribonuclease [Escherichia coli O7:K1 str. CE10]
gi|354859452|gb|EHF19899.1| oligoribonuclease [Escherichia coli O104:H4 str. C227-11]
gi|354860688|gb|EHF21133.1| oligoribonuclease [Escherichia coli O104:H4 str. 04-8351]
gi|354866148|gb|EHF26571.1| oligoribonuclease [Escherichia coli O104:H4 str. C236-11]
gi|354876493|gb|EHF36853.1| oligoribonuclease [Escherichia coli O104:H4 str. 09-7901]
gi|354883388|gb|EHF43708.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4404]
gi|354884589|gb|EHF44900.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-3677]
gi|354886842|gb|EHF47123.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4522]
gi|354890807|gb|EHF51044.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4623]
gi|354902987|gb|EHF63098.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4632 C1]
gi|354906427|gb|EHF66503.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4632 C2]
gi|354908737|gb|EHF68784.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4632 C3]
gi|354910866|gb|EHF70881.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4632 C4]
gi|354919297|gb|EHF79246.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-4632 C5]
gi|355349080|gb|EHF98291.1| oligoribonuclease [Escherichia coli cloneA_i1]
gi|355423071|gb|AER87268.1| oligoribonuclease [Escherichia coli str. 'clone D i2']
gi|355427991|gb|AER92187.1| oligoribonuclease [Escherichia coli str. 'clone D i14']
gi|359334272|dbj|BAL40719.1| oligoribonuclease [Escherichia coli str. K-12 substr. MDS42]
gi|371597443|gb|EHN86265.1| oligoribonuclease [Escherichia coli H494]
gi|371597686|gb|EHN86505.1| oligoribonuclease [Escherichia coli TA124]
gi|371607219|gb|EHN95796.1| oligoribonuclease [Escherichia coli H397]
gi|371610401|gb|EHN98930.1| oligoribonuclease [Escherichia coli B093]
gi|371614716|gb|EHO03199.1| oligoribonuclease [Escherichia coli E101]
gi|373247611|gb|EHP67051.1| oligoribonuclease [Escherichia coli 4_1_47FAA]
gi|375321784|gb|EHS67589.1| oligoribonuclease [Escherichia coli O157:H43 str. T22]
gi|377837690|gb|EHU02817.1| oligoribonuclease monomer [Escherichia coli DEC1C]
gi|377837941|gb|EHU03067.1| oligoribonuclease monomer [Escherichia coli DEC1A]
gi|377840044|gb|EHU05120.1| oligoribonuclease monomer [Escherichia coli DEC1B]
gi|377854911|gb|EHU19787.1| oligoribonuclease monomer [Escherichia coli DEC1E]
gi|377856175|gb|EHU21036.1| oligoribonuclease [Escherichia coli DEC2A]
gi|377864877|gb|EHU29669.1| oligoribonuclease [Escherichia coli DEC1D]
gi|377869445|gb|EHU34161.1| oligoribonuclease monomer [Escherichia coli DEC2B]
gi|377870669|gb|EHU35343.1| oligoribonuclease monomer [Escherichia coli DEC2C]
gi|377872903|gb|EHU37545.1| oligoribonuclease monomer [Escherichia coli DEC2D]
gi|377884391|gb|EHU48903.1| oligoribonuclease monomer [Escherichia coli DEC2E]
gi|377989990|gb|EHV53153.1| oligoribonuclease [Escherichia coli DEC6C]
gi|378003174|gb|EHV66220.1| oligoribonuclease [Escherichia coli DEC6D]
gi|378005449|gb|EHV68453.1| oligoribonuclease monomer [Escherichia coli DEC6E]
gi|378008120|gb|EHV71080.1| oligoribonuclease [Escherichia coli DEC7A]
gi|378020507|gb|EHV83253.1| oligoribonuclease monomer [Escherichia coli DEC7C]
gi|378022683|gb|EHV85368.1| oligoribonuclease monomer [Escherichia coli DEC7D]
gi|378026789|gb|EHV89422.1| oligoribonuclease monomer [Escherichia coli DEC7B]
gi|378033336|gb|EHV95915.1| oligoribonuclease [Escherichia coli DEC7E]
gi|378041445|gb|EHW03906.1| oligoribonuclease [Escherichia coli DEC8A]
gi|378041538|gb|EHW03998.1| oligoribonuclease monomer [Escherichia coli DEC8B]
gi|378046061|gb|EHW08442.1| oligoribonuclease monomer [Escherichia coli DEC8C]
gi|378056363|gb|EHW18607.1| oligoribonuclease monomer [Escherichia coli DEC8D]
gi|378058990|gb|EHW21195.1| oligoribonuclease monomer [Escherichia coli DEC8E]
gi|378066332|gb|EHW28468.1| oligoribonuclease monomer [Escherichia coli DEC9A]
gi|378071743|gb|EHW33811.1| oligoribonuclease monomer [Escherichia coli DEC9B]
gi|378077214|gb|EHW39209.1| oligoribonuclease monomer [Escherichia coli DEC9C]
gi|378085648|gb|EHW47535.1| oligoribonuclease monomer [Escherichia coli DEC9D]
gi|378087250|gb|EHW49111.1| oligoribonuclease monomer [Escherichia coli DEC9E]
gi|378094686|gb|EHW56478.1| oligoribonuclease monomer [Escherichia coli DEC10A]
gi|378099807|gb|EHW61505.1| oligoribonuclease monomer [Escherichia coli DEC10B]
gi|378106012|gb|EHW67648.1| oligoribonuclease monomer [Escherichia coli DEC10C]
gi|378111249|gb|EHW72834.1| oligoribonuclease monomer [Escherichia coli DEC10D]
gi|378122545|gb|EHW83973.1| oligoribonuclease monomer [Escherichia coli DEC10E]
gi|378123183|gb|EHW84601.1| oligoribonuclease monomer [Escherichia coli DEC11A]
gi|378136992|gb|EHW98275.1| oligoribonuclease monomer [Escherichia coli DEC11B]
gi|378140987|gb|EHX02204.1| oligoribonuclease monomer [Escherichia coli DEC10F]
gi|378142724|gb|EHX03924.1| oligoribonuclease [Escherichia coli DEC11D]
gi|378144588|gb|EHX05759.1| oligoribonuclease [Escherichia coli DEC11C]
gi|378153430|gb|EHX14514.1| oligoribonuclease [Escherichia coli DEC11E]
gi|378159860|gb|EHX20862.1| oligoribonuclease monomer [Escherichia coli DEC12B]
gi|378162980|gb|EHX23935.1| oligoribonuclease [Escherichia coli DEC12A]
gi|378163855|gb|EHX24806.1| oligoribonuclease [Escherichia coli DEC12C]
gi|378177950|gb|EHX38734.1| oligoribonuclease monomer [Escherichia coli DEC12D]
gi|378181066|gb|EHX41742.1| oligoribonuclease monomer [Escherichia coli DEC12E]
gi|378211250|gb|EHX71590.1| oligoribonuclease [Escherichia coli DEC14A]
gi|378212572|gb|EHX72894.1| oligoribonuclease monomer [Escherichia coli DEC14B]
gi|378222560|gb|EHX82796.1| oligoribonuclease monomer [Escherichia coli DEC14C]
gi|378225605|gb|EHX85802.1| oligoribonuclease monomer [Escherichia coli DEC14D]
gi|378232399|gb|EHX92500.1| oligoribonuclease monomer [Escherichia coli DEC15A]
gi|378238784|gb|EHX98778.1| oligoribonuclease monomer [Escherichia coli DEC15B]
gi|378241637|gb|EHY01603.1| oligoribonuclease monomer [Escherichia coli DEC15C]
gi|378249503|gb|EHY09412.1| oligoribonuclease monomer [Escherichia coli DEC15D]
gi|378254704|gb|EHY14567.1| oligoribonuclease monomer [Escherichia coli DEC15E]
gi|380345818|gb|EIA34126.1| oligoribonuclease [Escherichia coli SCI-07]
gi|383394492|gb|AFH19450.1| oligoribonuclease [Escherichia coli KO11FL]
gi|383407799|gb|AFH14042.1| oligoribonuclease [Escherichia coli W]
gi|385156780|gb|EIF18775.1| oligoribonuclease [Escherichia coli O32:H37 str. P4]
gi|385540675|gb|EIF87494.1| oligoribonuclease [Escherichia coli M919]
gi|385706068|gb|EIG43127.1| oligoribonuclease [Escherichia coli B799]
gi|385713959|gb|EIG50884.1| oligoribonuclease [Escherichia coli H730]
gi|386138697|gb|EIG79856.1| oligoribonuclease [Escherichia coli 1.2741]
gi|386144282|gb|EIG90749.1| oligoribonuclease [Escherichia coli 97.0246]
gi|386150696|gb|EIH01985.1| oligoribonuclease [Escherichia coli 5.0588]
gi|386156816|gb|EIH13159.1| oligoribonuclease [Escherichia coli 97.0259]
gi|386161796|gb|EIH23599.1| oligoribonuclease [Escherichia coli 1.2264]
gi|386165183|gb|EIH31703.1| oligoribonuclease [Escherichia coli 96.0497]
gi|386174590|gb|EIH46583.1| oligoribonuclease [Escherichia coli 99.0741]
gi|386176270|gb|EIH53749.1| oligoribonuclease [Escherichia coli 3.2608]
gi|386183546|gb|EIH66294.1| oligoribonuclease [Escherichia coli 93.0624]
gi|386192151|gb|EIH80886.1| oligoribonuclease [Escherichia coli 4.0522]
gi|386196840|gb|EIH91052.1| oligoribonuclease [Escherichia coli JB1-95]
gi|386200118|gb|EIH99109.1| oligoribonuclease [Escherichia coli 96.154]
gi|386205448|gb|EII09958.1| oligoribonuclease [Escherichia coli 5.0959]
gi|386210871|gb|EII21342.1| oligoribonuclease [Escherichia coli 9.0111]
gi|386216337|gb|EII32826.1| oligoribonuclease [Escherichia coli 4.0967]
gi|386225504|gb|EII47834.1| oligoribonuclease [Escherichia coli 2.3916]
gi|386228640|gb|EII55996.1| oligoribonuclease [Escherichia coli 3.3884]
gi|386233839|gb|EII65819.1| oligoribonuclease [Escherichia coli 2.4168]
gi|386238349|gb|EII75286.1| oligoribonuclease [Escherichia coli 3.2303]
gi|386245746|gb|EII87476.1| oligoribonuclease [Escherichia coli 3003]
gi|386248562|gb|EII94734.1| oligoribonuclease [Escherichia coli TW07793]
gi|386251589|gb|EIJ01281.1| oligoribonuclease [Escherichia coli B41]
gi|386258675|gb|EIJ14153.1| oligoribonuclease [Escherichia coli 900105 (10e)]
gi|388334276|gb|EIL00875.1| oligoribonuclease [Escherichia coli O103:H25 str. CVM9340]
gi|388343697|gb|EIL09628.1| oligoribonuclease [Escherichia coli O103:H2 str. CVM9450]
gi|388347546|gb|EIL13210.1| oligoribonuclease [Escherichia coli O111:H11 str. CVM9545]
gi|388348310|gb|EIL13921.1| oligoribonuclease [Escherichia coli O111:H11 str. CVM9534]
gi|388361484|gb|EIL25592.1| oligoribonuclease [Escherichia coli O111:H8 str. CVM9570]
gi|388362260|gb|EIL26292.1| oligoribonuclease [Escherichia coli O111:H8 str. CVM9574]
gi|388375889|gb|EIL38869.1| Exonuclease RNase T and DNA polymerase III [Escherichia coli
O26:H11 str. CVM10026]
gi|388376121|gb|EIL39078.1| oligoribonuclease [Escherichia coli O26:H11 str. CVM9942]
gi|388397246|gb|EIL58265.1| oligoribonuclease [Escherichia coli 541-15]
gi|388402375|gb|EIL62947.1| oligoribonuclease [Escherichia coli 541-1]
gi|388403906|gb|EIL64404.1| oligoribonuclease [Escherichia coli 576-1]
gi|388410614|gb|EIL70829.1| oligoribonuclease [Escherichia coli 75]
gi|388415247|gb|EIL75179.1| oligoribonuclease [Escherichia coli CUMT8]
gi|388422208|gb|EIL81793.1| oligoribonuclease [Escherichia coli HM605]
gi|391256740|gb|EIQ15863.1| oligoribonuclease [Shigella flexneri K-315]
gi|391290372|gb|EIQ48831.1| oligoribonuclease [Shigella sonnei 3226-85]
gi|391291189|gb|EIQ49605.1| oligoribonuclease monomer [Shigella sonnei 4822-66]
gi|391296795|gb|EIQ54872.1| oligoribonuclease [Shigella dysenteriae 225-75]
gi|391300493|gb|EIQ58411.1| oligoribonuclease [Escherichia coli EPECa12]
gi|391308412|gb|EIQ66110.1| oligoribonuclease monomer [Escherichia coli EPEC C342-62]
gi|394383920|gb|EJE61499.1| oligoribonuclease [Escherichia coli O111:H8 str. CVM9634]
gi|394387686|gb|EJE65069.1| oligoribonuclease [Escherichia coli O26:H11 str. CVM10224]
gi|394388042|gb|EJE65370.1| oligoribonuclease [Escherichia coli O111:H8 str. CVM9602]
gi|394408055|gb|EJE82787.1| oligoribonuclease [Escherichia coli O26:H11 str. CVM10021]
gi|394410850|gb|EJE85169.1| oligoribonuclease [Escherichia coli O111:H11 str. CVM9553]
gi|394417533|gb|EJE91258.1| oligoribonuclease [Escherichia coli O111:H11 str. CVM9455]
gi|394426151|gb|EJE99040.1| oligoribonuclease [Escherichia coli O26:H11 str. CVM9952]
gi|394430124|gb|EJF02476.1| oligoribonuclease [Escherichia coli O26:H11 str. CVM10030]
gi|397782246|gb|EJK93114.1| exonuclease family protein [Escherichia coli STEC_O31]
gi|397893868|gb|EJL10322.1| oligoribonuclease monomer [Shigella sonnei str. Moseley]
gi|404293181|gb|EEH72285.2| oligoribonuclease [Escherichia sp. 1_1_43]
gi|406779775|gb|AFS59199.1| oligoribonuclease [Escherichia coli O104:H4 str. 2009EL-2050]
gi|407056367|gb|AFS76418.1| oligoribonuclease [Escherichia coli O104:H4 str. 2011C-3493]
gi|407063246|gb|AFS84293.1| oligoribonuclease [Escherichia coli O104:H4 str. 2009EL-2071]
gi|408188959|gb|EKI14730.1| oligoribonuclease [Escherichia coli TW15901]
gi|408196738|gb|EKI22017.1| oligoribonuclease [Escherichia coli ARS4.2123]
gi|408200497|gb|EKI25675.1| oligoribonuclease [Escherichia coli TW00353]
gi|408209554|gb|EKI34143.1| oligoribonuclease [Escherichia coli 07798]
gi|408224007|gb|EKI47745.1| oligoribonuclease [Escherichia coli N1]
gi|408292490|gb|EKJ11011.1| oligoribonuclease [Escherichia coli EC1865]
gi|408339999|gb|EKJ54518.1| oligoribonuclease [Escherichia coli 0.1288]
gi|408458685|gb|EKJ82471.1| exonuclease [Escherichia coli AD30]
gi|408562141|gb|EKK38312.1| oligoribonuclease [Escherichia coli 8.0566]
gi|408563271|gb|EKK39409.1| oligoribonuclease [Escherichia coli 8.0569]
gi|421940868|gb|EKT98305.1| oligoribonuclease [Escherichia coli O26:H11 str. CFSAN001629]
gi|421941068|gb|EKT98494.1| oligoribonuclease [Escherichia coli O111:H8 str. CFSAN001632]
gi|421950289|gb|EKU07173.1| oligoribonuclease [Escherichia coli O111:H11 str. CFSAN001630]
gi|429353627|gb|EKY90334.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02030]
gi|429354552|gb|EKY91249.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02033-1]
gi|429355141|gb|EKY91834.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02092]
gi|429368306|gb|EKZ04894.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02093]
gi|429369543|gb|EKZ06119.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02281]
gi|429371607|gb|EKZ08161.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02318]
gi|429383776|gb|EKZ20234.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-02913]
gi|429387301|gb|EKZ23742.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-03439]
gi|429387730|gb|EKZ24166.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-03943]
gi|429398527|gb|EKZ34862.1| oligoribonuclease [Escherichia coli O104:H4 str. 11-04080]
gi|429400698|gb|EKZ37012.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-9990]
gi|429401838|gb|EKZ38133.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-9450]
gi|429411549|gb|EKZ47756.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-4984]
gi|429413499|gb|EKZ49685.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-4986]
gi|429420356|gb|EKZ56485.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-4987]
gi|429424295|gb|EKZ60397.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-4988]
gi|429429692|gb|EKZ65759.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-5603]
gi|429437443|gb|EKZ73449.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-5604]
gi|429442815|gb|EKZ78768.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec12-0465]
gi|429446068|gb|EKZ82005.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-6006]
gi|429452705|gb|EKZ88585.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec12-0466]
gi|429457256|gb|EKZ93096.1| oligoribonuclease [Escherichia coli O104:H4 str. Ec11-9941]
gi|430872016|gb|ELB95636.1| oligoribonuclease [Escherichia coli KTE4]
gi|430882085|gb|ELC05290.1| oligoribonuclease [Escherichia coli KTE2]
gi|430890280|gb|ELC12917.1| oligoribonuclease [Escherichia coli KTE10]
gi|430895052|gb|ELC17328.1| oligoribonuclease [Escherichia coli KTE12]
gi|430902409|gb|ELC24282.1| oligoribonuclease [Escherichia coli KTE15]
gi|430911233|gb|ELC32520.1| oligoribonuclease [Escherichia coli KTE16]
gi|430912316|gb|ELC33498.1| oligoribonuclease [Escherichia coli KTE21]
gi|430919584|gb|ELC40515.1| oligoribonuclease [Escherichia coli KTE25]
gi|430921953|gb|ELC42776.1| oligoribonuclease [Escherichia coli KTE26]
gi|430925436|gb|ELC46107.1| oligoribonuclease [Escherichia coli KTE28]
gi|430939736|gb|ELC59947.1| oligoribonuclease [Escherichia coli KTE39]
gi|430946053|gb|ELC66118.1| oligoribonuclease [Escherichia coli KTE44]
gi|430948594|gb|ELC68181.1| oligoribonuclease [Escherichia coli KTE178]
gi|430949530|gb|ELC68962.1| oligoribonuclease [Escherichia coli KTE181]
gi|430957824|gb|ELC76427.1| oligoribonuclease [Escherichia coli KTE187]
gi|430960399|gb|ELC78555.1| oligoribonuclease [Escherichia coli KTE189]
gi|430968923|gb|ELC86093.1| oligoribonuclease [Escherichia coli KTE188]
gi|430976081|gb|ELC92957.1| oligoribonuclease [Escherichia coli KTE193]
gi|430977620|gb|ELC94454.1| oligoribonuclease [Escherichia coli KTE191]
gi|430984724|gb|ELD01346.1| oligoribonuclease [Escherichia coli KTE204]
gi|430987332|gb|ELD03873.1| oligoribonuclease [Escherichia coli KTE201]
gi|430989141|gb|ELD05608.1| oligoribonuclease [Escherichia coli KTE205]
gi|430994822|gb|ELD11140.1| oligoribonuclease [Escherichia coli KTE206]
gi|431000457|gb|ELD16517.1| oligoribonuclease [Escherichia coli KTE208]
gi|431012086|gb|ELD26156.1| oligoribonuclease [Escherichia coli KTE210]
gi|431012734|gb|ELD26502.1| oligoribonuclease [Escherichia coli KTE212]
gi|431025061|gb|ELD38179.1| oligoribonuclease [Escherichia coli KTE216]
gi|431030076|gb|ELD43103.1| oligoribonuclease [Escherichia coli KTE214]
gi|431036858|gb|ELD47847.1| oligoribonuclease [Escherichia coli KTE224]
gi|431046622|gb|ELD56719.1| oligoribonuclease [Escherichia coli KTE228]
gi|431056386|gb|ELD65899.1| oligoribonuclease [Escherichia coli KTE230]
gi|431058679|gb|ELD68070.1| oligoribonuclease [Escherichia coli KTE233]
gi|431065685|gb|ELD74445.1| oligoribonuclease [Escherichia coli KTE234]
gi|431066097|gb|ELD74845.1| oligoribonuclease [Escherichia coli KTE235]
gi|431069619|gb|ELD77947.1| oligoribonuclease [Escherichia coli KTE236]
gi|431075144|gb|ELD82679.1| oligoribonuclease [Escherichia coli KTE237]
gi|431087490|gb|ELD93411.1| oligoribonuclease [Escherichia coli KTE47]
gi|431095770|gb|ELE01375.1| oligoribonuclease [Escherichia coli KTE49]
gi|431101864|gb|ELE06773.1| oligoribonuclease [Escherichia coli KTE51]
gi|431103860|gb|ELE08468.1| oligoribonuclease [Escherichia coli KTE53]
gi|431110494|gb|ELE14420.1| oligoribonuclease [Escherichia coli KTE56]
gi|431112987|gb|ELE16668.1| oligoribonuclease [Escherichia coli KTE55]
gi|431123552|gb|ELE26288.1| oligoribonuclease [Escherichia coli KTE57]
gi|431125042|gb|ELE27482.1| oligoribonuclease [Escherichia coli KTE58]
gi|431135069|gb|ELE36997.1| oligoribonuclease [Escherichia coli KTE62]
gi|431143348|gb|ELE45083.1| oligoribonuclease [Escherichia coli KTE67]
gi|431145293|gb|ELE46950.1| oligoribonuclease [Escherichia coli KTE72]
gi|431148787|gb|ELE50066.1| oligoribonuclease [Escherichia coli KTE75]
gi|431153917|gb|ELE54810.1| oligoribonuclease [Escherichia coli KTE76]
gi|431166203|gb|ELE66529.1| oligoribonuclease [Escherichia coli KTE80]
gi|431166887|gb|ELE67191.1| oligoribonuclease [Escherichia coli KTE77]
gi|431175167|gb|ELE75187.1| oligoribonuclease [Escherichia coli KTE81]
gi|431176238|gb|ELE76203.1| oligoribonuclease [Escherichia coli KTE83]
gi|431176817|gb|ELE76758.1| oligoribonuclease [Escherichia coli KTE86]
gi|431186783|gb|ELE86322.1| oligoribonuclease [Escherichia coli KTE93]
gi|431204956|gb|ELF03470.1| oligoribonuclease [Escherichia coli KTE111]
gi|431205965|gb|ELF04401.1| oligoribonuclease [Escherichia coli KTE116]
gi|431209443|gb|ELF07552.1| oligoribonuclease [Escherichia coli KTE142]
gi|431215294|gb|ELF12991.1| oligoribonuclease [Escherichia coli KTE119]
gi|431226525|gb|ELF23689.1| oligoribonuclease [Escherichia coli KTE156]
gi|431229481|gb|ELF26130.1| oligoribonuclease [Escherichia coli KTE162]
gi|431233147|gb|ELF28740.1| oligoribonuclease [Escherichia coli KTE161]
gi|431238835|gb|ELF33490.1| oligoribonuclease [Escherichia coli KTE169]
gi|431248206|gb|ELF42409.1| oligoribonuclease [Escherichia coli KTE171]
gi|431250205|gb|ELF44352.1| oligoribonuclease [Escherichia coli KTE8]
gi|431253241|gb|ELF46720.1| oligoribonuclease [Escherichia coli KTE6]
gi|431269598|gb|ELF60908.1| oligoribonuclease [Escherichia coli KTE17]
gi|431278126|gb|ELF69128.1| oligoribonuclease [Escherichia coli KTE18]
gi|431279468|gb|ELF70427.1| oligoribonuclease [Escherichia coli KTE45]
gi|431287569|gb|ELF78379.1| oligoribonuclease [Escherichia coli KTE23]
gi|431288533|gb|ELF79296.1| oligoribonuclease [Escherichia coli KTE43]
gi|431288772|gb|ELF79530.1| oligoribonuclease [Escherichia coli KTE42]
gi|431292556|gb|ELF82944.1| oligoribonuclease [Escherichia coli KTE29]
gi|431297971|gb|ELF87606.1| oligoribonuclease [Escherichia coli KTE22]
gi|431304073|gb|ELF92610.1| oligoribonuclease [Escherichia coli KTE46]
gi|431314736|gb|ELG02669.1| oligoribonuclease [Escherichia coli KTE48]
gi|431321056|gb|ELG08679.1| oligoribonuclease [Escherichia coli KTE50]
gi|431322858|gb|ELG10441.1| oligoribonuclease [Escherichia coli KTE54]
gi|431332491|gb|ELG19713.1| oligoribonuclease [Escherichia coli KTE59]
gi|431334151|gb|ELG21322.1| oligoribonuclease [Escherichia coli KTE65]
gi|431343485|gb|ELG30443.1| oligoribonuclease [Escherichia coli KTE78]
gi|431346919|gb|ELG33813.1| oligoribonuclease [Escherichia coli KTE79]
gi|431351630|gb|ELG38416.1| oligoribonuclease [Escherichia coli KTE91]
gi|431358983|gb|ELG45628.1| oligoribonuclease [Escherichia coli KTE115]
gi|431371855|gb|ELG57559.1| oligoribonuclease [Escherichia coli KTE118]
gi|431376389|gb|ELG61711.1| oligoribonuclease [Escherichia coli KTE123]
gi|431381357|gb|ELG65988.1| oligoribonuclease [Escherichia coli KTE135]
gi|431390027|gb|ELG73736.1| oligoribonuclease [Escherichia coli KTE136]
gi|431396234|gb|ELG79720.1| oligoribonuclease [Escherichia coli KTE144]
gi|431399271|gb|ELG82679.1| oligoribonuclease [Escherichia coli KTE141]
gi|431406513|gb|ELG89733.1| oligoribonuclease [Escherichia coli KTE147]
gi|431410032|gb|ELG93195.1| oligoribonuclease [Escherichia coli KTE146]
gi|431415976|gb|ELG98468.1| oligoribonuclease [Escherichia coli KTE154]
gi|431421994|gb|ELH04190.1| oligoribonuclease [Escherichia coli KTE158]
gi|431427834|gb|ELH09777.1| oligoribonuclease [Escherichia coli KTE165]
gi|431432261|gb|ELH14032.1| oligoribonuclease [Escherichia coli KTE192]
gi|431438926|gb|ELH20296.1| oligoribonuclease [Escherichia coli KTE194]
gi|431449958|gb|ELH30523.1| oligoribonuclease [Escherichia coli KTE190]
gi|431450604|gb|ELH31090.1| oligoribonuclease [Escherichia coli KTE173]
gi|431450998|gb|ELH31475.1| oligoribonuclease [Escherichia coli KTE175]
gi|431458579|gb|ELH38903.1| oligoribonuclease [Escherichia coli KTE184]
gi|431459080|gb|ELH39398.1| oligoribonuclease [Escherichia coli KTE183]
gi|431465643|gb|ELH45725.1| oligoribonuclease [Escherichia coli KTE196]
gi|431475288|gb|ELH55092.1| oligoribonuclease [Escherichia coli KTE203]
gi|431476036|gb|ELH55832.1| oligoribonuclease [Escherichia coli KTE197]
gi|431484111|gb|ELH63792.1| oligoribonuclease [Escherichia coli KTE209]
gi|431484983|gb|ELH64654.1| oligoribonuclease [Escherichia coli KTE202]
gi|431488545|gb|ELH68178.1| oligoribonuclease [Escherichia coli KTE207]
gi|431491526|gb|ELH71131.1| oligoribonuclease [Escherichia coli KTE215]
gi|431500409|gb|ELH79424.1| oligoribonuclease [Escherichia coli KTE211]
gi|431501354|gb|ELH80338.1| oligoribonuclease [Escherichia coli KTE217]
gi|431512481|gb|ELH90605.1| oligoribonuclease [Escherichia coli KTE218]
gi|431519707|gb|ELH97138.1| oligoribonuclease [Escherichia coli KTE229]
gi|431520252|gb|ELH97678.1| oligoribonuclease [Escherichia coli KTE227]
gi|431525177|gb|ELI01980.1| oligoribonuclease [Escherichia coli KTE104]
gi|431525941|gb|ELI02715.1| oligoribonuclease [Escherichia coli KTE105]
gi|431528764|gb|ELI05470.1| oligoribonuclease [Escherichia coli KTE106]
gi|431538802|gb|ELI14785.1| oligoribonuclease [Escherichia coli KTE109]
gi|431544616|gb|ELI19432.1| oligoribonuclease [Escherichia coli KTE112]
gi|431546591|gb|ELI20985.1| oligoribonuclease [Escherichia coli KTE113]
gi|431550869|gb|ELI24857.1| oligoribonuclease [Escherichia coli KTE117]
gi|431560466|gb|ELI33979.1| oligoribonuclease [Escherichia coli KTE120]
gi|431564082|gb|ELI37265.1| oligoribonuclease [Escherichia coli KTE122]
gi|431564357|gb|ELI37532.1| oligoribonuclease [Escherichia coli KTE124]
gi|431577021|gb|ELI49678.1| oligoribonuclease [Escherichia coli KTE125]
gi|431577526|gb|ELI50159.1| oligoribonuclease [Escherichia coli KTE128]
gi|431580671|gb|ELI53229.1| oligoribonuclease [Escherichia coli KTE129]
gi|431591795|gb|ELI62705.1| oligoribonuclease [Escherichia coli KTE131]
gi|431596670|gb|ELI66621.1| oligoribonuclease [Escherichia coli KTE133]
gi|431599021|gb|ELI68805.1| oligoribonuclease [Escherichia coli KTE137]
gi|431611006|gb|ELI80288.1| oligoribonuclease [Escherichia coli KTE139]
gi|431614065|gb|ELI83228.1| oligoribonuclease [Escherichia coli KTE145]
gi|431622105|gb|ELI90890.1| oligoribonuclease [Escherichia coli KTE148]
gi|431623071|gb|ELI91751.1| oligoribonuclease [Escherichia coli KTE150]
gi|431628974|gb|ELI97343.1| oligoribonuclease [Escherichia coli KTE153]
gi|431637519|gb|ELJ05580.1| oligoribonuclease [Escherichia coli KTE157]
gi|431640858|gb|ELJ08611.1| oligoribonuclease [Escherichia coli KTE163]
gi|431652561|gb|ELJ19711.1| oligoribonuclease [Escherichia coli KTE166]
gi|431655926|gb|ELJ22955.1| oligoribonuclease [Escherichia coli KTE168]
gi|431668734|gb|ELJ35247.1| oligoribonuclease [Escherichia coli KTE176]
gi|431671758|gb|ELJ38034.1| oligoribonuclease [Escherichia coli KTE177]
gi|431681969|gb|ELJ47739.1| oligoribonuclease [Escherichia coli KTE179]
gi|431682514|gb|ELJ48279.1| oligoribonuclease [Escherichia coli KTE180]
gi|431685331|gb|ELJ50905.1| oligoribonuclease [Escherichia coli KTE232]
gi|431696774|gb|ELJ61928.1| oligoribonuclease [Escherichia coli KTE82]
gi|431700078|gb|ELJ65064.1| oligoribonuclease [Escherichia coli KTE85]
gi|431700218|gb|ELJ65201.1| oligoribonuclease [Escherichia coli KTE88]
gi|431712023|gb|ELJ76326.1| oligoribonuclease [Escherichia coli KTE90]
gi|431715384|gb|ELJ79548.1| oligoribonuclease [Escherichia coli KTE94]
gi|431727220|gb|ELJ90982.1| oligoribonuclease [Escherichia coli KTE97]
gi|431730287|gb|ELJ93854.1| oligoribonuclease [Escherichia coli KTE99]
gi|432345444|gb|ELL39949.1| oligoribonuclease [Escherichia coli J96]
gi|441609181|emb|CCP95178.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|441652258|emb|CCQ02227.1| 3'-to-5' oligoribonuclease (orn) [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
gi|443420186|gb|AGC85090.1| oligoribonuclease [Escherichia coli APEC O78]
gi|449312637|gb|EMD02888.1| oligoribonuclease [Escherichia coli O08]
gi|449313095|gb|EMD03322.1| oligoribonuclease [Escherichia coli S17]
gi|449315015|gb|EMD05169.1| oligoribonuclease [Escherichia coli SEPT362]
Length = 181
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|440463455|gb|ELQ33035.1| oligoribonuclease [Magnaporthe oryzae Y34]
Length = 223
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 19/50 (38%), Positives = 30/50 (60%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV 82
++ +E + M+EWC + H SGLT RV S+ + EEA L ++ K+V
Sbjct: 49 VHQTQERMDKMDEWCTKQHGGSGLTARVVGSTTTPEEAADGLLAYIKKHV 98
>gi|134295109|ref|YP_001118844.1| oligoribonuclease [Burkholderia vietnamiensis G4]
gi|387901729|ref|YP_006332068.1| 3'-to-5' oligoribonuclease [Burkholderia sp. KJ006]
gi|166215757|sp|A4JCK6.1|ORN_BURVG RecName: Full=Oligoribonuclease
gi|134138266|gb|ABO54009.1| Exonuclease, RNase T and DNA polymerase III [Burkholderia
vietnamiensis G4]
gi|387576621|gb|AFJ85337.1| 3'-to-5' oligoribonuclease [Burkholderia sp. KJ006]
Length = 200
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 25/60 (41%), Positives = 37/60 (61%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRVRAS+V+ +A +L F+A YV P +PM G
Sbjct: 59 AIHQSDETLAKMDDWNKSTHGRSGLIDRVRASTVTEAQAAAQLQAFLADYVSPGKSPMCG 118
>gi|423016415|ref|ZP_17007136.1| oligoribonuclease [Achromobacter xylosoxidans AXX-A]
gi|338780562|gb|EGP44968.1| oligoribonuclease [Achromobacter xylosoxidans AXX-A]
Length = 181
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ +L M+ W H SGL D+VRAS++S +A+ L F+A++V +P+ G
Sbjct: 48 VHQSDSLLDAMDSWNKSTHGKSGLIDKVRASTISEAQAEDTLLAFLAQHVPAGKSPLCG 106
>gi|418039931|ref|ZP_12678184.1| exonuclease [Escherichia coli W26]
gi|418959946|ref|ZP_13511842.1| exonuclease [Escherichia coli J53]
gi|419803207|ref|ZP_14328379.1| exonuclease [Escherichia coli AI27]
gi|424818680|ref|ZP_18243831.1| hypothetical protein ECD227_3797 [Escherichia fergusonii ECD227]
gi|325499700|gb|EGC97559.1| hypothetical protein ECD227_3797 [Escherichia fergusonii ECD227]
gi|383477228|gb|EID69154.1| exonuclease [Escherichia coli W26]
gi|384377287|gb|EIE35182.1| exonuclease [Escherichia coli J53]
gi|384473625|gb|EIE57664.1| exonuclease [Escherichia coli AI27]
Length = 185
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 50 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 109
Query: 91 G 91
G
Sbjct: 110 G 110
>gi|432365535|ref|ZP_19608682.1| oligoribonuclease [Escherichia coli KTE5]
gi|430882471|gb|ELC05609.1| oligoribonuclease [Escherichia coli KTE5]
Length = 181
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|161486369|ref|NP_839708.2| oligoribonuclease [Shigella flexneri 2a str. 2457T]
gi|229774924|ref|YP_691603.2| oligoribonuclease [Shigella flexneri 5 str. 8401]
gi|415860121|ref|ZP_11534195.1| exonuclease family protein [Shigella flexneri 2a str. 2457T]
gi|417699954|ref|ZP_12349102.1| exonuclease family protein [Shigella flexneri K-218]
gi|417705311|ref|ZP_12354386.1| exonuclease family protein [Shigella flexneri VA-6]
gi|417726108|ref|ZP_12374885.1| exonuclease family protein [Shigella flexneri K-304]
gi|417731346|ref|ZP_12380023.1| exonuclease family protein [Shigella flexneri K-671]
gi|417731707|ref|ZP_12380380.1| exonuclease family protein [Shigella flexneri 2747-71]
gi|417741247|ref|ZP_12389809.1| exonuclease family protein [Shigella flexneri 4343-70]
gi|417746243|ref|ZP_12394758.1| oligoribonuclease monomer [Shigella flexneri 2930-71]
gi|418260589|ref|ZP_12883060.1| oligoribonuclease monomer [Shigella flexneri 6603-63]
gi|420328983|ref|ZP_14830701.1| oligoribonuclease [Shigella flexneri K-1770]
gi|420344826|ref|ZP_14846280.1| oligoribonuclease [Shigella flexneri K-404]
gi|420377890|ref|ZP_14877434.1| oligoribonuclease [Shigella flexneri 1235-66]
gi|424840449|ref|ZP_18265086.1| oligoribonuclease [Shigella flexneri 5a str. M90T]
gi|41017443|sp|Q83IJ9.3|ORN_SHIFL RecName: Full=Oligoribonuclease
gi|313646361|gb|EFS10823.1| exonuclease family protein [Shigella flexneri 2a str. 2457T]
gi|332749041|gb|EGJ79464.1| exonuclease family protein [Shigella flexneri K-671]
gi|332749309|gb|EGJ79730.1| exonuclease family protein [Shigella flexneri 4343-70]
gi|332761883|gb|EGJ92157.1| exonuclease family protein [Shigella flexneri 2747-71]
gi|332763212|gb|EGJ93455.1| oligoribonuclease monomer [Shigella flexneri 2930-71]
gi|333009212|gb|EGK28668.1| exonuclease family protein [Shigella flexneri K-218]
gi|333010312|gb|EGK29745.1| exonuclease family protein [Shigella flexneri VA-6]
gi|333011977|gb|EGK31362.1| exonuclease family protein [Shigella flexneri K-304]
gi|383469501|gb|EID64522.1| oligoribonuclease [Shigella flexneri 5a str. M90T]
gi|391260479|gb|EIQ19537.1| oligoribonuclease [Shigella flexneri K-404]
gi|391261821|gb|EIQ20866.1| oligoribonuclease [Shigella flexneri K-1770]
gi|391293130|gb|EIQ51424.1| oligoribonuclease [Shigella flexneri 1235-66]
gi|397893242|gb|EJL09702.1| oligoribonuclease monomer [Shigella flexneri 6603-63]
Length = 181
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|158428766|pdb|2IGI|A Chain A, Crystal Structure Of E. Coli Oligoribonuclease
gi|158428767|pdb|2IGI|B Chain B, Crystal Structure Of E. Coli Oligoribonuclease
Length = 180
Score = 43.9 bits (102), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 45 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|81248005|gb|ABB68713.1| conserved hypothetical protein [Shigella boydii Sb227]
Length = 204
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 69 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 128
Query: 91 G 91
G
Sbjct: 129 G 129
>gi|331665829|ref|ZP_08366723.1| oligoribonuclease [Escherichia coli TA143]
gi|331056880|gb|EGI28874.1| oligoribonuclease [Escherichia coli TA143]
Length = 181
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|90413340|ref|ZP_01221333.1| oligoribonuclease [Photobacterium profundum 3TCK]
gi|90325582|gb|EAS42051.1| oligoribonuclease [Photobacterium profundum 3TCK]
Length = 181
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 35/61 (57%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +E L M++WC H SGL +R+R S+ + E+A ++ F+ ++V +P+
Sbjct: 46 LAIHQSEAELAKMDDWCTNTHTNSGLVERIRQSAFTEEDAIRQTIAFLEQWVPKGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|422322147|ref|ZP_16403189.1| oligoribonuclease [Achromobacter xylosoxidans C54]
gi|317402939|gb|EFV83479.1| oligoribonuclease [Achromobacter xylosoxidans C54]
Length = 181
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 36/59 (61%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ +L M+ W H SGL D+VRAS++S +A+ L F+A++V +P+ G
Sbjct: 48 VHQSDSLLDAMDNWNKSTHGKSGLIDKVRASTISEAQAEDTLLAFLAQHVPAGKSPLCG 106
>gi|328774277|gb|EGF84314.1| hypothetical protein BATDEDRAFT_9096 [Batrachochytrium
dendrobatidis JAM81]
Length = 188
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/70 (28%), Positives = 42/70 (60%), Gaps = 2/70 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
L+ + V+ MN+WC++ H SGLT +V S++++++A+ + FV +++ K + + G
Sbjct: 50 LHQPKSVMDQMNDWCIQTHGESGLTKQVIESTLTLKDAEATILDFVKRHIPKQREGVLAG 109
Query: 92 -EYHTSKELL 100
H ++ L
Sbjct: 110 NSVHVDRQFL 119
>gi|414579048|ref|ZP_11436205.1| oligoribonuclease [Shigella sonnei 3233-85]
gi|391279615|gb|EIQ38301.1| oligoribonuclease [Shigella sonnei 3233-85]
Length = 167
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 32 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 91
Query: 91 G 91
G
Sbjct: 92 G 92
>gi|344915382|ref|NP_710030.4| hypothetical protein SF4319 [Shigella flexneri 2a str. 301]
gi|384545840|ref|YP_005729904.1| oligoribonuclease [Shigella flexneri 2002017]
gi|30043801|gb|AAP19520.1| hypothetical protein S4584 [Shigella flexneri 2a str. 2457T]
gi|56384132|gb|AAN45737.2| conserved hypothetical protein [Shigella flexneri 2a str. 301]
gi|110617631|gb|ABF06298.1| conserved hypothetical protein [Shigella flexneri 5 str. 8401]
gi|281603627|gb|ADA76611.1| Oligoribonuclease [Shigella flexneri 2002017]
Length = 204
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 69 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 128
Query: 91 G 91
G
Sbjct: 129 G 129
>gi|300920814|ref|ZP_07137214.1| exonuclease [Escherichia coli MS 115-1]
gi|427807388|ref|ZP_18974455.1| hypothetical protein BN16_01871 [Escherichia coli chi7122]
gi|427811972|ref|ZP_18979037.1| hypothetical protein BN17_41421 [Escherichia coli]
gi|537006|gb|AAA97061.1| ORF_o204a [Escherichia coli str. K-12 substr. MG1655]
gi|73858127|gb|AAZ90834.1| conserved hypothetical protein [Shigella sonnei Ss046]
gi|81243603|gb|ABB64313.1| conserved hypothetical protein [Shigella dysenteriae Sd197]
gi|115515635|gb|ABJ03710.1| oligoribonuclease [Escherichia coli APEC O1]
gi|300412206|gb|EFJ95516.1| exonuclease [Escherichia coli MS 115-1]
gi|358256845|dbj|GAA57984.1| oligoribonuclease [Clonorchis sinensis]
gi|412965570|emb|CCK49503.1| hypothetical protein BN16_01871 [Escherichia coli chi7122]
gi|412972151|emb|CCJ46822.1| hypothetical protein BN17_41421 [Escherichia coli]
Length = 204
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 69 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 128
Query: 91 G 91
G
Sbjct: 129 G 129
>gi|348518231|ref|XP_003446635.1| PREDICTED: methyl-CpG-binding domain protein 5-like [Oreochromis
niloticus]
Length = 1427
Score = 43.9 bits (102), Expect = 0.013, Method: Composition-based stats.
Identities = 18/26 (69%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS + LSS+EQV+ YL T GTCKCGL
Sbjct: 39 PSGSVLSSLEQVRTYLLTDGTCKCGL 64
>gi|312882822|ref|ZP_07742555.1| oligoribonuclease [Vibrio caribbenthicus ATCC BAA-2122]
gi|309369514|gb|EFP97033.1| oligoribonuclease [Vibrio caribbenthicus ATCC BAA-2122]
Length = 181
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 31/52 (59%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M++WC H ASGL +RV++S++S A + F+ K+V +P+ G
Sbjct: 55 LAKMDDWCTNTHTASGLVERVQSSAISEHSAVSQTIDFLEKWVPKGASPICG 106
>gi|295098321|emb|CBK87411.1| Oligoribonuclease (3'->5' exoribonuclease) [Enterobacter cloacae
subsp. cloacae NCTC 9394]
Length = 181
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 36/61 (59%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +++ L M+EW V H SGL +RV+ASS+ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDDQLALMDEWNVRTHTGSGLVERVKASSLGDREAELATLEFLKQWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|152973034|ref|YP_001338180.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
gi|166216264|sp|A6TH79.1|ORN_KLEP7 RecName: Full=Oligoribonuclease
gi|150957883|gb|ABR79913.1| oligoribonuclease [Klebsiella pneumoniae subsp. pneumoniae MGH
78578]
Length = 181
Score = 43.9 bits (102), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 31/52 (59%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M+EW V H SGL DRV+AS+VS +A+ F+ ++V +P+ G
Sbjct: 55 LALMDEWNVRTHTGSGLVDRVKASTVSEHDAELATIDFLKQWVPAGKSPICG 106
>gi|337291398|ref|YP_004630419.1| hypothetical protein CULC22_01790 [Corynebacterium ulcerans
BR-AD22]
gi|384516244|ref|YP_005711336.1| hypothetical protein CULC809_01710 [Corynebacterium ulcerans 809]
gi|397654600|ref|YP_006495283.1| hypothetical protein CULC0102_1850 [Corynebacterium ulcerans 0102]
gi|334697445|gb|AEG82242.1| hypothetical protein CULC809_01710 [Corynebacterium ulcerans 809]
gi|334699704|gb|AEG84500.1| hypothetical protein CULC22_01790 [Corynebacterium ulcerans
BR-AD22]
gi|393403556|dbj|BAM28048.1| hypothetical protein CULC0102_1850 [Corynebacterium ulcerans 0102]
Length = 219
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/53 (37%), Positives = 34/53 (64%), Gaps = 1/53 (1%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK-TAPMVG 91
L M+++ H SGLT +R+S+VSI+EA+ + + +AK+ P+ AP+ G
Sbjct: 68 LAEMDDYVTTMHENSGLTQEIRSSTVSIKEAEDAVLELIAKHCDPQHPAPLAG 120
>gi|332284719|ref|YP_004416630.1| hypothetical protein PT7_1466 [Pusillimonas sp. T7-7]
gi|330428672|gb|AEC20006.1| hypothetical protein PT7_1466 [Pusillimonas sp. T7-7]
Length = 169
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/59 (32%), Positives = 39/59 (66%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ +L M++W H SGL D+V+AS+++ +A+++L F+A++V +PM G
Sbjct: 36 IHQSDALLDAMDKWNQSTHGKSGLIDKVKASTLTEAQAEEQLLAFLAQHVPSGKSPMCG 94
>gi|322708953|gb|EFZ00530.1| phosphoglucomutase [Metarhizium anisopliae ARSEF 23]
Length = 231
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/64 (31%), Positives = 35/64 (54%), Gaps = 2/64 (3%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG--EYHTSK 97
L M+EWC + H SGLT V ASS + E+A + L+ ++ +++ K ++ H +
Sbjct: 94 LDQMDEWCTQTHGNSGLTAAVLASSTTPEQAAEGLYNYITRFIPEKRKALLAGNSVHADR 153
Query: 98 ELLK 101
L+
Sbjct: 154 AFLR 157
>gi|300115276|ref|YP_003761851.1| exonuclease RNase T and DNA polymerase III [Nitrosococcus watsonii
C-113]
gi|299541213|gb|ADJ29530.1| Exonuclease RNase T and DNA polymerase III [Nitrosococcus watsonii
C-113]
Length = 183
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 34/61 (55%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +L NM+EW H+ SGL +RVR S ++ A+++ F+ ++ ++PM
Sbjct: 46 IAIHQKNTILDNMDEWNTRQHHKSGLVERVRQSLINEATAEQQTLAFLNRHTPANSSPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|296139064|ref|YP_003646307.1| exonuclease RNase T and DNA polymerase III [Tsukamurella
paurometabola DSM 20162]
gi|296027198|gb|ADG77968.1| Exonuclease RNase T and DNA polymerase III [Tsukamurella
paurometabola DSM 20162]
Length = 198
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 18/59 (30%), Positives = 36/59 (61%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ L M + H SGLTD VR S+V++ EA++ + ++ ++++P T P+ G
Sbjct: 45 IHVDDAALDAMPPVVQDMHAKSGLTDEVRRSTVTVREAEEAVLAYLREHIEPGTVPLAG 103
>gi|301023446|ref|ZP_07187227.1| exonuclease [Escherichia coli MS 69-1]
gi|300396998|gb|EFJ80536.1| exonuclease [Escherichia coli MS 69-1]
Length = 199
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 64 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 123
Query: 91 G 91
G
Sbjct: 124 G 124
>gi|293604208|ref|ZP_06686616.1| oligoribonuclease [Achromobacter piechaudii ATCC 43553]
gi|292817433|gb|EFF76506.1| oligoribonuclease [Achromobacter piechaudii ATCC 43553]
Length = 181
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 32/53 (60%)
Query: 39 VLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+L M+ W H SGL D+VRAS+VS +A+ L F+A++V +P+ G
Sbjct: 54 LLDAMDNWNKSTHGKSGLIDKVRASTVSESQAEDTLLAFLAQHVPAGKSPLCG 106
>gi|227886794|ref|ZP_04004599.1| exoribonuclease II [Escherichia coli 83972]
gi|300816535|ref|ZP_07096756.1| exonuclease [Escherichia coli MS 107-1]
gi|300821256|ref|ZP_07101404.1| exonuclease [Escherichia coli MS 119-7]
gi|300899700|ref|ZP_07117927.1| exonuclease [Escherichia coli MS 198-1]
gi|300905993|ref|ZP_07123717.1| exonuclease [Escherichia coli MS 84-1]
gi|300922430|ref|ZP_07138550.1| exonuclease [Escherichia coli MS 182-1]
gi|300929272|ref|ZP_07144748.1| exonuclease [Escherichia coli MS 187-1]
gi|300974947|ref|ZP_07172786.1| exonuclease [Escherichia coli MS 45-1]
gi|300975250|ref|ZP_07172914.1| exonuclease [Escherichia coli MS 200-1]
gi|301047612|ref|ZP_07194678.1| exonuclease [Escherichia coli MS 185-1]
gi|301302580|ref|ZP_07208710.1| exonuclease [Escherichia coli MS 124-1]
gi|301325927|ref|ZP_07219348.1| exonuclease [Escherichia coli MS 78-1]
gi|301646609|ref|ZP_07246475.1| exonuclease [Escherichia coli MS 146-1]
gi|309796975|ref|ZP_07691375.1| exonuclease [Escherichia coli MS 145-7]
gi|387832104|ref|YP_003352041.1| oligoribonuclease [Escherichia coli SE15]
gi|415863545|ref|ZP_11536785.1| exonuclease [Escherichia coli MS 85-1]
gi|415875283|ref|ZP_11542075.1| oligoribonuclease [Escherichia coli MS 79-10]
gi|422352618|ref|ZP_16433391.1| exonuclease [Escherichia coli MS 117-3]
gi|422357706|ref|ZP_16438371.1| exonuclease [Escherichia coli MS 110-3]
gi|422363192|ref|ZP_16443733.1| exonuclease [Escherichia coli MS 153-1]
gi|422370643|ref|ZP_16451036.1| exonuclease [Escherichia coli MS 16-3]
gi|422380174|ref|ZP_16460354.1| exonuclease [Escherichia coli MS 57-2]
gi|227836136|gb|EEJ46602.1| exoribonuclease II [Escherichia coli 83972]
gi|281181261|dbj|BAI57591.1| oligoribonuclease [Escherichia coli SE15]
gi|300300491|gb|EFJ56876.1| exonuclease [Escherichia coli MS 185-1]
gi|300308749|gb|EFJ63269.1| exonuclease [Escherichia coli MS 200-1]
gi|300356743|gb|EFJ72613.1| exonuclease [Escherichia coli MS 198-1]
gi|300402160|gb|EFJ85698.1| exonuclease [Escherichia coli MS 84-1]
gi|300410435|gb|EFJ93973.1| exonuclease [Escherichia coli MS 45-1]
gi|300421249|gb|EFK04560.1| exonuclease [Escherichia coli MS 182-1]
gi|300462765|gb|EFK26258.1| exonuclease [Escherichia coli MS 187-1]
gi|300526145|gb|EFK47214.1| exonuclease [Escherichia coli MS 119-7]
gi|300530765|gb|EFK51827.1| exonuclease [Escherichia coli MS 107-1]
gi|300842105|gb|EFK69865.1| exonuclease [Escherichia coli MS 124-1]
gi|300847280|gb|EFK75040.1| exonuclease [Escherichia coli MS 78-1]
gi|301075156|gb|EFK89962.1| exonuclease [Escherichia coli MS 146-1]
gi|308119388|gb|EFO56650.1| exonuclease [Escherichia coli MS 145-7]
gi|315255507|gb|EFU35475.1| exonuclease [Escherichia coli MS 85-1]
gi|315288511|gb|EFU47909.1| exonuclease [Escherichia coli MS 110-3]
gi|315294059|gb|EFU53411.1| exonuclease [Escherichia coli MS 153-1]
gi|315297605|gb|EFU56882.1| exonuclease [Escherichia coli MS 16-3]
gi|324008605|gb|EGB77824.1| exonuclease [Escherichia coli MS 57-2]
gi|324019342|gb|EGB88561.1| exonuclease [Escherichia coli MS 117-3]
gi|342929479|gb|EGU98201.1| oligoribonuclease [Escherichia coli MS 79-10]
Length = 199
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 64 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPAGKSPIC 123
Query: 91 G 91
G
Sbjct: 124 G 124
>gi|255724028|ref|XP_002546943.1| oligoribonuclease, mitochondrial precursor [Candida tropicalis
MYA-3404]
gi|240134834|gb|EER34388.1| oligoribonuclease, mitochondrial precursor [Candida tropicalis
MYA-3404]
Length = 256
Score = 43.9 bits (102), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 36/61 (59%), Gaps = 2/61 (3%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRAS-SVSIEEADKRLHQFVAKYV-KPKTAPMV 90
+YY + L MNEWC+E H SGLT +V A+ ++ + L +++ KY+ K + A +
Sbjct: 95 IYYPKSRLDQMNEWCIETHGKSGLTAKVLANPDRKLDIVENELLEYIKKYIPKERDALLA 154
Query: 91 G 91
G
Sbjct: 155 G 155
>gi|432683019|ref|ZP_19918365.1| oligoribonuclease [Escherichia coli KTE143]
gi|431216043|gb|ELF13688.1| oligoribonuclease [Escherichia coli KTE143]
Length = 181
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPEGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|254195663|ref|ZP_04902090.1| oligoribonuclease [Burkholderia pseudomallei S13]
gi|169652409|gb|EDS85102.1| oligoribonuclease [Burkholderia pseudomallei S13]
Length = 203
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRVRASSV+ +A ++ F+A++V P +PM G
Sbjct: 61 AIHQSDETLAKMDDWNKNTHGRSGLIDRVRASSVTEADAAAQIAAFLARHVPPGKSPMCG 120
>gi|238787531|ref|ZP_04631329.1| Oligoribonuclease [Yersinia frederiksenii ATCC 33641]
gi|238724318|gb|EEQ15960.1| Oligoribonuclease [Yersinia frederiksenii ATCC 33641]
Length = 181
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW V H SGL +RV+AS + +A+ + +F+ ++V T+P+
Sbjct: 46 LAVHQSDEQLALMDEWNVRTHTGSGLVERVKASPFNDHDAELQTIEFLQQWVPAGTSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|163856231|ref|YP_001630529.1| oligoribonuclease [Bordetella petrii DSM 12804]
gi|163259959|emb|CAP42260.1| oligoribonuclease [Bordetella petrii]
Length = 181
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 19/55 (34%), Positives = 35/55 (63%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ +L M+ W H SGL D+VRAS+++ +A++ L +F+A++V +P+ G
Sbjct: 52 DSLLDAMDNWNKSTHGKSGLIDKVRASTLTEAQAERMLLEFLAQHVPAGKSPLCG 106
>gi|169610561|ref|XP_001798699.1| hypothetical protein SNOG_08385 [Phaeosphaeria nodorum SN15]
gi|160702099|gb|EAT84661.2| hypothetical protein SNOG_08385 [Phaeosphaeria nodorum SN15]
Length = 473
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/70 (32%), Positives = 38/70 (54%), Gaps = 2/70 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++++ E L M EWC HH SGL+ S+ + E+A + L +++ KYV + +T + G
Sbjct: 24 IHHSREQLDRMGEWCTSHHGDSGLSQDCLDSTTTAEQAAEGLLEYIKKYVPERRTGLLAG 83
Query: 92 -EYHTSKELL 100
H K L
Sbjct: 84 NSVHADKSFL 93
>gi|453364453|dbj|GAC79730.1| oligoribonuclease [Gordonia malaquae NBRC 108250]
Length = 188
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 38/60 (63%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPK-TAPMVG 91
++ ++E L NM + E H SGLT+ VRAS+V++ EA++ + ++ ++V T P+ G
Sbjct: 34 IHADDEALANMPDVVTEMHAKSGLTEEVRASTVTLAEAEEMVLAYLRQHVSATGTVPLAG 93
>gi|423126974|ref|ZP_17114653.1| oligoribonuclease [Klebsiella oxytoca 10-5250]
gi|376396041|gb|EHT08685.1| oligoribonuclease [Klebsiella oxytoca 10-5250]
Length = 181
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 35/61 (57%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW V H SGL +RV+AS+ EA+ +F+ K+V +P+
Sbjct: 46 IAVHQSDEQLALMDEWNVRTHTGSGLVERVKASTQGDREAELATIEFLKKWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|254480996|ref|ZP_05094242.1| exonuclease superfamily protein [marine gamma proteobacterium
HTCC2148]
gi|41582287|gb|AAS07901.1| oligoribonuclease [uncultured marine bacterium 463]
gi|214038791|gb|EEB79452.1| exonuclease superfamily protein [marine gamma proteobacterium
HTCC2148]
Length = 182
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 31/61 (50%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW HHN+SGL RV AS A F+ ++V +PM
Sbjct: 45 IAIHTSDERLNAMDEWNTTHHNSSGLVARVTASDYDGHRAATETMAFLEQWVPAGVSPMC 104
Query: 91 G 91
G
Sbjct: 105 G 105
>gi|53720090|ref|YP_109076.1| oligoribonuclease [Burkholderia pseudomallei K96243]
gi|126451823|ref|YP_001067153.1| oligoribonuclease [Burkholderia pseudomallei 1106a]
gi|134277998|ref|ZP_01764713.1| oligoribonuclease [Burkholderia pseudomallei 305]
gi|167816819|ref|ZP_02448499.1| oligoribonuclease [Burkholderia pseudomallei 91]
gi|167846725|ref|ZP_02472233.1| oligoribonuclease [Burkholderia pseudomallei B7210]
gi|217420377|ref|ZP_03451882.1| oligoribonuclease [Burkholderia pseudomallei 576]
gi|237813261|ref|YP_002897712.1| oligoribonuclease [Burkholderia pseudomallei MSHR346]
gi|242316244|ref|ZP_04815260.1| oligoribonuclease [Burkholderia pseudomallei 1106b]
gi|403519576|ref|YP_006653710.1| oligoribonuclease [Burkholderia pseudomallei BPC006]
gi|418380338|ref|ZP_12966317.1| oligoribonuclease [Burkholderia pseudomallei 354a]
gi|418540197|ref|ZP_13105758.1| oligoribonuclease [Burkholderia pseudomallei 1258a]
gi|418546445|ref|ZP_13111664.1| oligoribonuclease [Burkholderia pseudomallei 1258b]
gi|418552688|ref|ZP_13117540.1| oligoribonuclease [Burkholderia pseudomallei 354e]
gi|59798009|sp|Q63S41.1|ORN_BURPS RecName: Full=Oligoribonuclease
gi|166215755|sp|A3NXT2.1|ORN_BURP0 RecName: Full=Oligoribonuclease
gi|52210504|emb|CAH36487.1| oligoribonuclease [Burkholderia pseudomallei K96243]
gi|126225465|gb|ABN89005.1| oligoribonuclease [Burkholderia pseudomallei 1106a]
gi|134251648|gb|EBA51727.1| oligoribonuclease [Burkholderia pseudomallei 305]
gi|217395789|gb|EEC35806.1| oligoribonuclease [Burkholderia pseudomallei 576]
gi|237503180|gb|ACQ95498.1| oligoribonuclease [Burkholderia pseudomallei MSHR346]
gi|242139483|gb|EES25885.1| oligoribonuclease [Burkholderia pseudomallei 1106b]
gi|385362452|gb|EIF68265.1| oligoribonuclease [Burkholderia pseudomallei 1258a]
gi|385364747|gb|EIF70455.1| oligoribonuclease [Burkholderia pseudomallei 1258b]
gi|385372704|gb|EIF77803.1| oligoribonuclease [Burkholderia pseudomallei 354e]
gi|385377460|gb|EIF82036.1| oligoribonuclease [Burkholderia pseudomallei 354a]
gi|403075219|gb|AFR16799.1| oligoribonuclease [Burkholderia pseudomallei BPC006]
Length = 201
Score = 43.5 bits (101), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 38/60 (63%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++E L M++W H SGL DRVRASSV+ +A ++ F+A++V P +PM G
Sbjct: 59 AIHQSDETLAKMDDWNKNTHGRSGLIDRVRASSVTEADAAAQIAAFLARHVPPGKSPMCG 118
>gi|431931159|ref|YP_007244205.1| oligoribonuclease [Thioflavicoccus mobilis 8321]
gi|431829462|gb|AGA90575.1| oligoribonuclease (3'->5' exoribonuclease) [Thioflavicoccus mobilis
8321]
Length = 181
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ E VL +++W HH SGL DRVR S+ A++ +F+ ++V +PM
Sbjct: 46 IAIHRPEHVLAGLDDWNRRHHGDSGLLDRVRTSTWEEGAAEQETLEFLVQHVPAGKSPMC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|380512290|ref|ZP_09855697.1| oligoribonuclease [Xanthomonas sacchari NCPPB 4393]
Length = 190
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%)
Query: 38 EVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ L+ M+EW H SGL RV S V++ A+ F+ ++ KP T+PM G
Sbjct: 56 QTLEAMDEWNRNQHRHSGLWQRVLDSQVTLAHAEAETMAFLTQWCKPGTSPMCG 109
>gi|291619097|ref|YP_003521839.1| Orn [Pantoea ananatis LMG 20103]
gi|386017349|ref|YP_005935647.1| oligoribonuclease Orn [Pantoea ananatis AJ13355]
gi|291154127|gb|ADD78711.1| Orn [Pantoea ananatis LMG 20103]
gi|327395429|dbj|BAK12851.1| oligoribonuclease Orn [Pantoea ananatis AJ13355]
Length = 194
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 30/49 (61%)
Query: 43 MNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
M+EW V H SGL +RV+AS + A+K +F+ ++V T+P+ G
Sbjct: 71 MDEWNVRTHTNSGLVERVKASKIDDRAAEKATIEFLQQWVPANTSPICG 119
>gi|388579592|gb|EIM19914.1| ribonuclease H-like protein [Wallemia sebi CBS 633.66]
Length = 229
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 32/54 (59%), Gaps = 1/54 (1%)
Query: 39 VLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
VL NMNEWC+ H SGLT +V S S + K ++++ +++ P+ + + G
Sbjct: 83 VLDNMNEWCISTHGLSGLTKQVLTSPFSHQTVSKVAYEYIKRWIPDPRISVIAG 136
>gi|124504550|gb|AAI28887.1| Zgc:158479 protein [Danio rerio]
Length = 792
Score = 43.5 bits (101), Expect = 0.015, Method: Composition-based stats.
Identities = 18/26 (69%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS + LS +EQVK+YL T GTCKCGL
Sbjct: 32 PSGSVLSCLEQVKSYLLTDGTCKCGL 57
>gi|441502758|ref|ZP_20984767.1| 3'-to-5' oligoribonuclease (orn) [Photobacterium sp. AK15]
gi|441429673|gb|ELR67126.1| 3'-to-5' oligoribonuclease (orn) [Photobacterium sp. AK15]
Length = 183
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ E L M+EWC H SGL +RVR S++ EA ++ F+ ++V +P+
Sbjct: 46 LAIHQPEAELAKMDEWCTTTHTNSGLVERVRQSNIDEGEAVRQTIAFLEQWVPKGASPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|344234797|gb|EGV66665.1| ribonuclease H-like protein [Candida tenuis ATCC 10573]
Length = 217
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 25/81 (30%), Positives = 40/81 (49%), Gaps = 7/81 (8%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRAS-SVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+YY+E VLQ M+ WC + H SGL ++V ++ ++ + L F+ KYV + G
Sbjct: 63 VYYDESVLQKMDAWCTKTHTESGLWNKVISNPDRTVSKVQDELLAFITKYVDIHKGLLAG 122
Query: 92 ------EYHTSKELLKDSDHF 106
++ KE K DH
Sbjct: 123 NSVHMDKFFMMKEFPKVIDHL 143
>gi|452947210|gb|EME52699.1| oligoribonuclease [Rhodococcus ruber BKS 20-38]
Length = 199
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++ ++E L M + E H SGLT+ VR S+VS+ EA+K + ++ +V + TAP+ G
Sbjct: 45 IHADDEALAAMPDVVTEMHERSGLTEEVRKSTVSVAEAEKMVLDYIRAHVPEAGTAPLAG 104
>gi|378765472|ref|YP_005193931.1| oligoribonuclease [Pantoea ananatis LMG 5342]
gi|386077723|ref|YP_005991248.1| oligoribonuclease Orn [Pantoea ananatis PA13]
gi|354986904|gb|AER31028.1| oligoribonuclease Orn [Pantoea ananatis PA13]
gi|365184944|emb|CCF07894.1| oligoribonuclease [Pantoea ananatis LMG 5342]
Length = 182
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 31/52 (59%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M+EW V H SGL +RV+AS + A+K +F+ ++V T+P+ G
Sbjct: 56 LALMDEWNVRTHTNSGLVERVKASKIDDRAAEKATIEFLQQWVPANTSPICG 107
>gi|253690114|ref|YP_003019304.1| Exonuclease RNase T and DNA polymerase III [Pectobacterium
carotovorum subsp. carotovorum PC1]
gi|251756692|gb|ACT14768.1| Exonuclease RNase T and DNA polymerase III [Pectobacterium
carotovorum subsp. carotovorum PC1]
Length = 180
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M++W V H ASGLTDRV+AS+ A+ F+ K+V +P+ G
Sbjct: 54 LALMDDWNVRTHGASGLTDRVKASTTDERAAELETLAFLQKWVPAGKSPICG 105
>gi|237809227|ref|YP_002893667.1| Exonuclease RNase T and DNA polymerase III [Tolumonas auensis DSM
9187]
gi|237501488|gb|ACQ94081.1| Exonuclease RNase T and DNA polymerase III [Tolumonas auensis DSM
9187]
Length = 181
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 32/60 (53%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +++VL M+EW H SGL DRVRAS +A F+ ++V +PM G
Sbjct: 47 AIHQSDDVLAGMDEWNTRTHGESGLVDRVRASECDEAKAVATCLTFIREWVPEGKSPMCG 106
>gi|163802739|ref|ZP_02196629.1| oligoribonuclease [Vibrio sp. AND4]
gi|159173446|gb|EDP58268.1| oligoribonuclease [Vibrio sp. AND4]
Length = 181
Score = 43.5 bits (101), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+E L M+EWC H SGL +RV S +S ++A ++ +F+ K+V +P+ G
Sbjct: 52 KEELAKMDEWCTNTHTTSGLVERVCHSQISEQDAVEQTIEFLQKWVPRGVSPICG 106
>gi|357417453|ref|YP_004930473.1| oligoribonuclease [Pseudoxanthomonas spadix BD-a59]
gi|355335031|gb|AER56432.1| oligoribonuclease [Pseudoxanthomonas spadix BD-a59]
Length = 189
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 33/54 (61%)
Query: 38 EVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ L+ M+EW H SGL DRV +S+V++ +A+ F+A++V +PM G
Sbjct: 55 DALEAMDEWNRNQHRHSGLWDRVVSSTVTLGQAEAATVDFLAQWVPANASPMSG 108
>gi|194434740|ref|ZP_03066992.1| oligoribonuclease [Shigella dysenteriae 1012]
gi|416282946|ref|ZP_11646586.1| 3'-to-5' oligoribonuclease (orn) [Shigella boydii ATCC 9905]
gi|417675545|ref|ZP_12324964.1| exonuclease family protein [Shigella dysenteriae 155-74]
gi|420350077|ref|ZP_14851437.1| oligoribonuclease [Shigella boydii 965-58]
gi|194417021|gb|EDX33138.1| oligoribonuclease [Shigella dysenteriae 1012]
gi|320180678|gb|EFW55605.1| 3'-to-5' oligoribonuclease (orn) [Shigella boydii ATCC 9905]
gi|332083629|gb|EGI88847.1| exonuclease family protein [Shigella dysenteriae 155-74]
gi|391263677|gb|EIQ22678.1| oligoribonuclease [Shigella boydii 965-58]
Length = 181
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 46 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELVTLEFLKQWVPAGKSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|148982513|ref|ZP_01816787.1| oligoribonuclease [Vibrionales bacterium SWAT-3]
gi|145960438|gb|EDK25820.1| oligoribonuclease [Vibrionales bacterium SWAT-3]
Length = 169
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 18/52 (34%), Positives = 31/52 (59%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M+EWC H SGL R++ S+V+ ++A ++ F+ K+V +P+ G
Sbjct: 55 LDKMDEWCTTTHTGSGLVKRIQESTVTEQDAIEQTIAFLEKWVPKGKSPICG 106
>gi|227113804|ref|ZP_03827460.1| oligoribonuclease [Pectobacterium carotovorum subsp. brasiliensis
PBR1692]
gi|227326226|ref|ZP_03830250.1| oligoribonuclease [Pectobacterium carotovorum subsp. carotovorum
WPP14]
gi|403060180|ref|YP_006648397.1| oligoribonuclease [Pectobacterium carotovorum subsp. carotovorum
PCC21]
gi|402807506|gb|AFR05144.1| oligoribonuclease [Pectobacterium carotovorum subsp. carotovorum
PCC21]
Length = 180
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 30/52 (57%)
Query: 40 LQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
L M++W V H ASGLTDRV+AS+ A+ F+ K+V +P+ G
Sbjct: 54 LALMDDWNVRTHGASGLTDRVKASTTDERAAELETLAFLQKWVPAGKSPICG 105
>gi|433551878|ref|ZP_20507918.1| 3'-to-5' oligoribonuclease (orn) [Yersinia enterocolitica IP 10393]
gi|431787176|emb|CCO70958.1| 3'-to-5' oligoribonuclease (orn) [Yersinia enterocolitica IP 10393]
Length = 257
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW V H SGL +RV+AS + +A+ + +F+ ++V T+P+
Sbjct: 122 LAVHQSDEQLGLMDEWNVRTHTGSGLVERVKASPFNDHDAELQTIEFLKQWVPAGTSPIC 181
Query: 91 G 91
G
Sbjct: 182 G 182
>gi|300940651|ref|ZP_07155212.1| exonuclease [Escherichia coli MS 21-1]
gi|300454539|gb|EFK18032.1| exonuclease [Escherichia coli MS 21-1]
Length = 199
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M++W V H ASGL +RV+AS++ EA+ +F+ ++V +P+
Sbjct: 64 IAVHQSDEQLALMDDWNVRTHTASGLVERVKASTMGDREAELATLEFLKQWVPEGKSPIC 123
Query: 91 G 91
G
Sbjct: 124 G 124
>gi|407279511|ref|ZP_11107981.1| oligoribonuclease [Rhodococcus sp. P14]
Length = 199
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYV-KPKTAPMVG 91
++ ++E L M + E H SGLT+ VR S+VS+ EA+K + ++ +V + TAP+ G
Sbjct: 45 IHADDEALAAMPDVVTEMHERSGLTEEVRRSTVSVAEAEKTVLDYIRAHVPEAGTAPLAG 104
>gi|333918708|ref|YP_004492289.1| putative oligoribonuclease [Amycolicicoccus subflavus DQS3-9A1]
gi|333480929|gb|AEF39489.1| putative oligoribonuclease [Amycolicicoccus subflavus DQS3-9A1]
Length = 212
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ ++ L M E H SGLT+ VR S+V+I+EA + + ++ K+V P TAP+ G
Sbjct: 45 IHADDADLDAMQPVVAEMHRRSGLTEEVRNSAVTIDEAQELVLDYIRKHVPTPSTAPLAG 104
>gi|319787041|ref|YP_004146516.1| exonuclease RNase T and DNA polymerase III [Pseudoxanthomonas
suwonensis 11-1]
gi|317465553|gb|ADV27285.1| Exonuclease RNase T and DNA polymerase III [Pseudoxanthomonas
suwonensis 11-1]
Length = 189
Score = 43.5 bits (101), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 32/54 (59%)
Query: 38 EVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+VL+ M++W H SGL RV S V++ +A+ R F+ ++V K +PM G
Sbjct: 55 QVLEAMDDWNRNQHGRSGLWQRVLDSDVTLAQAEARTVAFLNEWVPAKASPMCG 108
>gi|332160015|ref|YP_004296592.1| oligoribonuclease [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|386311047|ref|YP_006007103.1| 3'-to-5' oligoribonuclease [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418239922|ref|ZP_12866466.1| oligoribonuclease [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
gi|318607428|emb|CBY28926.1| 3'-to-5' oligoribonuclease (orn) [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664245|gb|ADZ40889.1| oligoribonuclease [Yersinia enterocolitica subsp. palearctica
105.5R(r)]
gi|330862350|emb|CBX72509.1| oligoribonuclease [Yersinia enterocolitica W22703]
gi|351780748|gb|EHB22813.1| oligoribonuclease [Yersinia enterocolitica subsp. palearctica
PhRBD_Ye1]
Length = 181
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW V H SGL +RV+AS + +A+ + +F+ ++V T+P+
Sbjct: 46 LAVHQSDEQLGLMDEWNVRTHTGSGLVERVKASPFNDHDAELQTIEFLKQWVPAGTSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|238063163|ref|ZP_04607872.1| oligoribonuclease [Micromonospora sp. ATCC 39149]
gi|237884974|gb|EEP73802.1| oligoribonuclease [Micromonospora sp. ATCC 39149]
Length = 198
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 36/60 (60%), Gaps = 1/60 (1%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVK-PKTAPMVG 91
++ +E L+ M E H SGLT+ VR S+V++ EA+ + +V +VK P+ AP+ G
Sbjct: 47 IHADEAALEAMPEIVRTMHGKSGLTEEVRRSAVTLAEAEDLVLDYVTSHVKDPRAAPLCG 106
>gi|359397027|ref|ZP_09190077.1| Oligoribonuclease [Halomonas boliviensis LC1]
gi|357968821|gb|EHJ91270.1| Oligoribonuclease [Halomonas boliviensis LC1]
Length = 201
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG-EYHT 95
+ +L M+EW + H SGL RV+AS V EA+++ F+ +Y ++PM G H
Sbjct: 64 DSLLAQMDEWNQKTHGESGLVARVKASQVETAEAEQQTLAFLQQYAVAGSSPMCGNSIHQ 123
Query: 96 SKELLK 101
+ L+
Sbjct: 124 DRRFLE 129
>gi|255020848|ref|ZP_05292904.1| Oligoribonuclease [Acidithiobacillus caldus ATCC 51756]
gi|340781415|ref|YP_004748022.1| Oligoribonuclease [Acidithiobacillus caldus SM-1]
gi|254969639|gb|EET27145.1| Oligoribonuclease [Acidithiobacillus caldus ATCC 51756]
gi|340555568|gb|AEK57322.1| Oligoribonuclease [Acidithiobacillus caldus SM-1]
Length = 200
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 33/61 (54%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ +E VL M++W H SGL RVR S + + + + F+ +V+P TAP+
Sbjct: 46 LAVHQSEAVLAAMDDWNQRTHGNSGLVQRVRESRLDLGAVEAQTLDFLQAHVQPGTAPLC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|260942501|ref|XP_002615549.1| hypothetical protein CLUG_04431 [Clavispora lusitaniae ATCC 42720]
gi|238850839|gb|EEQ40303.1| hypothetical protein CLUG_04431 [Clavispora lusitaniae ATCC 42720]
Length = 283
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 25/82 (30%), Positives = 45/82 (54%), Gaps = 8/82 (9%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASS-VSIEEADKRLHQFVAKYV-KPKTAPMV 90
+Y ++VL +MNEWCV H SGLT +V A+ ++ + + L ++ Y+ +P+T+ +
Sbjct: 76 VYVPKKVLDSMNEWCVNQHGKSGLTAKVLANPQQTLAKVQQELLDYIQFYIPEPRTSLLA 135
Query: 91 G------EYHTSKELLKDSDHF 106
G ++ KE + DH
Sbjct: 136 GNSVHMDKFFMMKEFPQVIDHL 157
>gi|123440753|ref|YP_001004745.1| oligoribonuclease [Yersinia enterocolitica subsp. enterocolitica
8081]
gi|166216592|sp|A1JIQ8.1|ORN_YERE8 RecName: Full=Oligoribonuclease
gi|122087714|emb|CAL10499.1| oligoribonuclease [Yersinia enterocolitica subsp. enterocolitica
8081]
Length = 181
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW V H SGL +RV+AS + +A+ + +F+ ++V T+P+
Sbjct: 46 LAVHQSDEQLGLMDEWNVRTHTGSGLVERVKASPFNDHDAELQTIEFLKQWVPAGTSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|420260840|ref|ZP_14763509.1| oligoribonuclease [Yersinia enterocolitica subsp. enterocolitica
WA-314]
gi|404511678|gb|EKA25544.1| oligoribonuclease [Yersinia enterocolitica subsp. enterocolitica
WA-314]
Length = 181
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 37/61 (60%)
Query: 31 CGLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMV 90
++ ++E L M+EW V H SGL +RV+AS + +A+ + +F+ ++V T+P+
Sbjct: 46 LAVHQSDEQLGLMDEWNVRTHTGSGLVERVKASPFNDHDAELQTIEFLKQWVPAGTSPIC 105
Query: 91 G 91
G
Sbjct: 106 G 106
>gi|347447812|pdb|3TR8|A Chain A, Structure Of An Oligoribonuclease (Orn) From Coxiella
Burnetii
gi|347447813|pdb|3TR8|B Chain B, Structure Of An Oligoribonuclease (Orn) From Coxiella
Burnetii
Length = 186
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ +++L + W HH ASGL +RV+ SSV EA+ F+ KYV +P+ G
Sbjct: 50 AIHQPDKLLTAXDNWNTSHHTASGLLERVKNSSVDEVEAETLTLAFLEKYVSAGKSPLCG 109
>gi|285018424|ref|YP_003376135.1| oligoribonuclease [Xanthomonas albilineans GPE PC73]
gi|283473642|emb|CBA16145.1| probable oligoribonuclease protein [Xanthomonas albilineans GPE
PC73]
Length = 190
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 38 EVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ L+ M+EW H SGL RV S V + +A+ + F+ ++ KP +PM G
Sbjct: 56 QTLEAMDEWNRNQHRQSGLWQRVLDSQVGLAQAEAQTMAFLTQWCKPGASPMCG 109
>gi|311104954|ref|YP_003977807.1| oligoribonuclease [Achromobacter xylosoxidans A8]
gi|310759643|gb|ADP15092.1| oligoribonuclease [Achromobacter xylosoxidans A8]
Length = 181
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 20/55 (36%), Positives = 33/55 (60%)
Query: 37 EEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
+ +L M+ W H SGL D+V+AS++S EA+ L F+A++V +P+ G
Sbjct: 52 DSLLDAMDSWNKSTHGKSGLIDKVKASTISESEAEDTLLAFLAQHVPAGKSPLCG 106
>gi|325087498|gb|EGC40808.1| oligoribonuclease [Ajellomyces capsulatus H88]
Length = 189
Score = 43.5 bits (101), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG- 91
+++ E VL NM++WC++ H SGLT V AS+ + A + L ++ K+V + ++
Sbjct: 51 IHHPESVLDNMDDWCIKTHGQSGLTAAVSASTTTPTAAAEGLLAYIKKHVPRRGTGLLAG 110
Query: 92 -EYHTSKELLKDSDHFLVFSW 111
H KE L + ++ W
Sbjct: 111 NSVHADKEFLACKPYSMILKW 131
>gi|237749183|ref|ZP_04579663.1| oligoribonuclease [Oxalobacter formigenes OXCC13]
gi|229380545|gb|EEO30636.1| oligoribonuclease [Oxalobacter formigenes OXCC13]
Length = 206
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 33/60 (55%)
Query: 32 GLYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG 91
++ ++ VL M+ W H SGL DRV+AS+++ A+ L F+ YV +PM G
Sbjct: 72 AIHQSDAVLNGMDAWNKGTHGRSGLIDRVKASNITEAMAEDALIDFLIDYVPRGKSPMCG 131
>gi|240273598|gb|EER37118.1| oligoribonuclease [Ajellomyces capsulatus H143]
Length = 189
Score = 43.5 bits (101), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 24/81 (29%), Positives = 43/81 (53%), Gaps = 2/81 (2%)
Query: 33 LYYNEEVLQNMNEWCVEHHNASGLTDRVRASSVSIEEADKRLHQFVAKYVKPKTAPMVG- 91
+++ E VL NM++WC++ H SGLT V AS+ + A + L ++ K+V + ++
Sbjct: 51 IHHPESVLDNMDDWCIKTHGQSGLTAAVSASTTTPTAAAEGLLAYIKKHVPRRGTGLLAG 110
Query: 92 -EYHTSKELLKDSDHFLVFSW 111
H KE L + ++ W
Sbjct: 111 NSVHADKEFLACKPYSMILKW 131
>gi|444509397|gb|ELV09234.1| Methyl-CpG-binding domain protein 6 [Tupaia chinensis]
Length = 362
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGL 64
>gi|440901106|gb|ELR52104.1| Methyl-CpG-binding domain protein 6 [Bos grunniens mutus]
Length = 1007
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGL 64
>gi|432112055|gb|ELK35083.1| Methyl-CpG-binding domain protein 6 [Myotis davidii]
Length = 444
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGL 64
>gi|431914053|gb|ELK15315.1| Methyl-CpG-binding domain protein 6 [Pteropus alecto]
Length = 718
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGL 64
>gi|426373180|ref|XP_004053490.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein
6 [Gorilla gorilla gorilla]
Length = 1007
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGL 64
>gi|426224863|ref|XP_004006588.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein
6 [Ovis aries]
Length = 1012
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGL 64
>gi|70778938|ref|NP_149063.2| methyl-CpG-binding domain protein 6 [Mus musculus]
Length = 1005
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 41 PSGTELSSLEQTRSYLLSDGTCKCGL 66
>gi|73968566|ref|XP_859707.1| PREDICTED: methyl-CpG-binding domain protein 6 isoform 5 [Canis
lupus familiaris]
Length = 1007
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGL 64
>gi|74182631|dbj|BAE34671.1| unnamed protein product [Mus musculus]
Length = 1003
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 41 PSGTELSSLEQTRSYLLSDGTCKCGL 66
>gi|46852161|ref|NP_443129.3| methyl-CpG-binding domain protein 6 [Homo sapiens]
gi|29336893|sp|Q96DN6.2|MBD6_HUMAN RecName: Full=Methyl-CpG-binding domain protein 6; AltName:
Full=Methyl-CpG-binding protein MBD6
gi|119617430|gb|EAW97024.1| methyl-CpG binding domain protein 6, isoform CRA_a [Homo sapiens]
gi|119617431|gb|EAW97025.1| methyl-CpG binding domain protein 6, isoform CRA_a [Homo sapiens]
gi|261858084|dbj|BAI45564.1| methyl-CpG binding domain protein 6 [synthetic construct]
Length = 1003
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGL 64
>gi|417405574|gb|JAA49496.1| Putative rhoa gtpase effector dia/diaphanous [Desmodus rotundus]
Length = 1005
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGL 64
>gi|410964913|ref|XP_003988997.1| PREDICTED: LOW QUALITY PROTEIN: methyl-CpG-binding domain protein
6 [Felis catus]
Length = 1007
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGL 64
>gi|403268951|ref|XP_003926524.1| PREDICTED: methyl-CpG-binding domain protein 6 [Saimiri
boliviensis boliviensis]
Length = 1001
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGL 64
>gi|402886584|ref|XP_003906708.1| PREDICTED: methyl-CpG-binding domain protein 6 [Papio anubis]
Length = 1003
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGL 64
>gi|397508967|ref|XP_003824909.1| PREDICTED: methyl-CpG-binding domain protein 6 [Pan paniscus]
Length = 1003
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGL 64
>gi|395835300|ref|XP_003790620.1| PREDICTED: methyl-CpG-binding domain protein 6 [Otolemur
garnettii]
Length = 1003
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGL 64
>gi|395540783|ref|XP_003772330.1| PREDICTED: methyl-CpG-binding domain protein 6 [Sarcophilus
harrisii]
Length = 1002
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGL 64
>gi|390467853|ref|XP_002752700.2| PREDICTED: methyl-CpG-binding domain protein 6 [Callithrix
jacchus]
Length = 1002
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGL 64
>gi|380792095|gb|AFE67923.1| methyl-CpG-binding domain protein 6, partial [Macaca mulatta]
Length = 881
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGL 64
>gi|359065517|ref|XP_003586124.1| PREDICTED: methyl-CpG-binding domain protein 6-like [Bos taurus]
Length = 1007
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGL 64
>gi|358412274|ref|XP_003582271.1| PREDICTED: methyl-CpG-binding domain protein 6-like [Bos taurus]
Length = 1007
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGL 64
>gi|355786243|gb|EHH66426.1| Methyl-CpG-binding protein MBD6 [Macaca fascicularis]
gi|383412465|gb|AFH29446.1| methyl-CpG-binding domain protein 6 [Macaca mulatta]
gi|387540636|gb|AFJ70945.1| methyl-CpG-binding domain protein 6 [Macaca mulatta]
Length = 1003
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGL 64
>gi|355564397|gb|EHH20897.1| Methyl-CpG-binding protein MBD6 [Macaca mulatta]
Length = 1003
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGL 64
>gi|344266269|ref|XP_003405203.1| PREDICTED: methyl-CpG-binding domain protein 6 [Loxodonta
africana]
Length = 996
Score = 43.1 bits (100), Expect = 0.018, Method: Composition-based stats.
Identities = 17/26 (65%), Positives = 21/26 (80%)
Query: 8 PSNTALSSMEQVKAYLQTQGTCKCGL 33
PS T LSS+EQ ++YL + GTCKCGL
Sbjct: 39 PSGTELSSLEQTRSYLLSDGTCKCGL 64
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.315 0.128 0.384
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 1,647,911,108
Number of Sequences: 23463169
Number of extensions: 56645640
Number of successful extensions: 144332
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 1512
Number of HSP's successfully gapped in prelim test: 54
Number of HSP's that attempted gapping in prelim test: 142812
Number of HSP's gapped (non-prelim): 1568
length of query: 111
length of database: 8,064,228,071
effective HSP length: 79
effective length of query: 32
effective length of database: 6,210,637,720
effective search space: 198740407040
effective search space used: 198740407040
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 69 (31.2 bits)