RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy13234
(1192 letters)
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 255
Score = 252 bits (646), Expect = 4e-77
Identities = 114/239 (47%), Positives = 147/239 (61%), Gaps = 34/239 (14%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 995
VG SG GKST+I L+ RFYDV SG I ID NIK SLR IG+V QD +LF++++K
Sbjct: 50 VGMSGGGKSTLINLIPRFYDVTSGQILIDGHNIKDFLTGSLRNQIGLVQQDNILFSDTVK 109
Query: 996 FNIQYARINASEEEVKEAATSADIHERILSFPDGYDTQYARINASEEEVKEAATSADIHE 1055
NI R A++EEV EAA A+ H+ I++ P GYDT+
Sbjct: 110 ENILLGRPTATDEEVVEAAKMANAHDFIMNLPQGYDTE---------------------- 147
Query: 1056 RILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQS 1115
VGERG+KLSGG+KQR++IAR L P I++LDEATSALD ++E IQ
Sbjct: 148 ------------VGERGVKLSGGQKQRLSIARIFLNNPPILILDEATSALDLESESIIQE 195
Query: 1116 ALNRVCASRTTIIVAHRLSTIIHADEILVMHAGEIVERGRHEELLERNGVYASMWIQQN 1174
AL+ + RTT+IVAHRLSTI HAD+I+V+ G IVE G H EL+ + G Y ++ QN
Sbjct: 196 ALDVLSKDRTTLIVAHRLSTITHADKIVVIENGHIVETGTHRELIAKQGAYEHLYSIQN 254
Score = 40.9 bits (96), Expect = 5e-04
Identities = 17/30 (56%), Positives = 24/30 (80%)
Query: 572 VGERGLKLSGGEKQRVAIALNSLVDKPLVF 601
VGERG+KLSGG+KQR++IA L + P++
Sbjct: 148 VGERGVKLSGGQKQRLSIARIFLNNPPILI 177
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter
MsbA, C-terminal domain {Salmonella typhimurium [TaxId:
90371]}
Length = 253
Score = 242 bits (618), Expect = 2e-73
Identities = 102/238 (42%), Positives = 146/238 (61%), Gaps = 33/238 (13%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 995
VG+SG+GKSTI L+ RFYD++ G I +D +++ + ASLR + +V Q+ LFN+++
Sbjct: 47 VGRSGSGKSTIASLITRFYDIDEGHILMDGHDLREYTLASLRNQVALVSQNVHLFNDTVA 106
Query: 996 FNIQYARINASEEEVKEAATSADIHERILSFPDGYDTQYARINASEEEVKEAATSADIHE 1055
NI YAR S E+++EAA A +
Sbjct: 107 NNIAYARTEE---------------------------------YSREQIEEAARMAYAMD 133
Query: 1056 RILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQS 1115
I +G DT +GE G+ LSGG++QR+AIAR LL+ I++LDEATSALDT++ER IQ+
Sbjct: 134 FINKMDNGLDTIIGENGVLLSGGQRQRIAIARALLRDSPILILDEATSALDTESERAIQA 193
Query: 1116 ALNRVCASRTTIIVAHRLSTIIHADEILVMHAGEIVERGRHEELLERNGVYASMWIQQ 1173
AL+ + +RT++++AHRLSTI ADEI+V+ G IVERG H ELL ++GVYA + Q
Sbjct: 194 ALDELQKNRTSLVIAHRLSTIEQADEIVVVEDGIIVERGTHSELLAQHGVYAQLHKMQ 251
Score = 39.8 bits (93), Expect = 0.001
Identities = 14/33 (42%), Positives = 22/33 (66%), Gaps = 1/33 (3%)
Query: 572 VGERGLKLSGGEKQRVAIALNSLVDKPLVFRWD 604
+GE G+ LSGG++QR+AIA +L+ + D
Sbjct: 146 IGENGVLLSGGQRQRIAIA-RALLRDSPILILD 177
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC
domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 251
Score = 222 bits (567), Expect = 2e-66
Identities = 72/237 (30%), Positives = 114/237 (48%), Gaps = 35/237 (14%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 995
VG +G+GKST+ LL Y G + +D + + L + + V Q+ +F S++
Sbjct: 46 VGPNGSGKSTVAALLQNLYQPTGGQLLLDGKPLPQYEHRYLHRQVAAVGQEPQVFGRSLQ 105
Query: 996 FNIQYARINASEEEVKEAATSADIHERILSFPDGYDTQYARINASEEEVKEAATSADIHE 1055
NI Y + EE+ AA + H
Sbjct: 106 ENIAYGL---------------------------------TQKPTMEEITAAAVKSGAHS 132
Query: 1056 RILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQS 1115
I P GYDT+V E G +LSGG++Q VA+AR L++ P +++LD+ATSALD ++ ++
Sbjct: 133 FISGLPQGYDTEVDEAGSQLSGGQRQAVALARALIRKPCVLILDDATSALDANSQLQVEQ 192
Query: 1116 ALNRVCA--SRTTIIVAHRLSTIIHADEILVMHAGEIVERGRHEELLERNGVYASMW 1170
L SR+ +++ LS + AD IL + G I E G H++L+E+ G Y +M
Sbjct: 193 LLYESPERYSRSVLLITQHLSLVEQADHILFLEGGAIREGGTHQQLMEKKGCYWAMV 249
Score = 33.3 bits (76), Expect = 0.12
Identities = 14/40 (35%), Positives = 22/40 (55%), Gaps = 1/40 (2%)
Query: 563 MALYLGKNT-VGERGLKLSGGEKQRVAIALNSLVDKPLVF 601
L G +T V E G +LSGG++Q VA+A + ++
Sbjct: 135 SGLPQGYDTEVDEAGSQLSGGQRQAVALARALIRKPCVLI 174
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA,
C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Length = 242
Score = 221 bits (565), Expect = 2e-66
Identities = 86/241 (35%), Positives = 134/241 (55%), Gaps = 33/241 (13%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 995
G SG GKSTI LL RFY +G+I ID Q I +S + R IG V QD+ + +I+
Sbjct: 34 AGPSGGGKSTIFSLLERFYQPTAGEITIDGQPIDNISLENWRSQIGFVSQDSAIMAGTIR 93
Query: 996 FNIQYARINASEEEVKEAATSADIHERILSFPDGYDTQYARINASEEEVKEAATSADIHE 1055
N+ Y + ++E++ + A
Sbjct: 94 ENLTYGL---------------------------------EGDYTDEDLWQVLDLAFARS 120
Query: 1056 RILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQS 1115
+ + PD +T+VGERG+K+SGG++QR+AIAR L+ P+I++LDEAT++LD+++E +Q
Sbjct: 121 FVENMPDQLNTEVGERGVKISGGQRQRLAIARAFLRNPKILMLDEATASLDSESESMVQK 180
Query: 1116 ALNRVCASRTTIIVAHRLSTIIHADEILVMHAGEIVERGRHEELLERNGVYASMWIQQNT 1175
AL+ + RTT+++AHRLSTI+ AD+I + G+I G+H EL+ + +YA +Q T
Sbjct: 181 ALDSLMKGRTTLVIAHRLSTIVDADKIYFIEKGQITGSGKHNELVATHPLYAKYVSEQLT 240
Query: 1176 K 1176
Sbjct: 241 V 241
Score = 38.7 bits (90), Expect = 0.002
Identities = 15/30 (50%), Positives = 23/30 (76%)
Query: 572 VGERGLKLSGGEKQRVAIALNSLVDKPLVF 601
VGERG+K+SGG++QR+AIA L + ++
Sbjct: 133 VGERGVKISGGQRQRLAIARAFLRNPKILM 162
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein
{Escherichia coli [TaxId: 562]}
Length = 241
Score = 212 bits (541), Expect = 5e-63
Identities = 95/240 (39%), Positives = 137/240 (57%), Gaps = 35/240 (14%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 995
VG+SG+GKST+ +L+ RFY E+G + ID ++ LR+ +GVV QD VL N SI
Sbjct: 35 VGRSGSGKSTLTKLIQRFYIPENGQVLIDGHDLALADPNWLRRQVGVVLQDNVLLNRSII 94
Query: 996 FNIQYARINASEEEVKEAATSADIHERILSFPDGYDTQYARINASEEEVKEAATSADIHE 1055
NI A S E+V AA A H+ I +GY+T
Sbjct: 95 DNISLANPGMSVEKVIYAAKLAGAHDFISELREGYNTIV--------------------- 133
Query: 1056 RILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQS 1115
GE+G LSGG++QR+AIAR L+ P+I++ DEATSALD ++E I
Sbjct: 134 -------------GEQGAGLSGGQRQRIAIARALVNNPKILIFDEATSALDYESEHVIMR 180
Query: 1116 ALNRVCASRTTIIVAHRLSTIIHADEILVMHAGEIVERGRHEELLER-NGVYASMWIQQN 1174
++++C RT II+AHRLST+ +AD I+VM G+IVE+G+H+ELL +Y+ ++ Q+
Sbjct: 181 NMHKICKGRTVIIIAHRLSTVKNADRIIVMEKGKIVEQGKHKELLSEPESLYSYLYQLQS 240
Score = 32.6 bits (74), Expect = 0.20
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 573 GERGLKLSGGEKQRVAIALNSLVDKPLVF 601
GE+G LSGG++QR+AIA + + ++
Sbjct: 134 GEQGAGLSGGQRQRIAIARALVNNPKILI 162
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance
regulator, CFTR, nucleotide-binding domain {Mouse (Mus
musculus) [TaxId: 10090]}
Length = 281
Score = 201 bits (512), Expect = 1e-58
Identities = 51/241 (21%), Positives = 98/241 (40%), Gaps = 49/241 (20%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 995
G +G+GK++++ L+ + G I + + Q + + +IK
Sbjct: 68 TGSTGSGKTSLLMLILGELEASEGIIKHSGR-------------VSFCSQFSWIMPGTIK 114
Query: 996 FNIQYARINASEEEVKEAATSADIHERILSFPDGYDTQYARINASEEEVKEAATSADIHE 1055
NI + + E K + + +
Sbjct: 115 ENIIFGV-----------------------------------SYDEYRYKSVVKACQLQQ 139
Query: 1056 RILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNI-Q 1114
I F + +T +GE G+ LSGG++ R+++AR + K + LLD LD TE + +
Sbjct: 140 DITKFAEQDNTVLGEGGVTLSGGQRARISLARAVYKDADLYLLDSPFGYLDVFTEEQVFE 199
Query: 1115 SALNRVCASRTTIIVAHRLSTIIHADEILVMHAGEIVERGRHEELLERNGVYASMWIQQN 1174
S + ++ A++T I+V ++ + AD+IL++H G G EL ++S + +
Sbjct: 200 SCVCKLMANKTRILVTSKMEHLRKADKILILHQGSSYFYGTFSELQSLRPDFSSKLMGYD 259
Query: 1175 T 1175
T
Sbjct: 260 T 260
Score = 33.0 bits (75), Expect = 0.17
Identities = 10/33 (30%), Positives = 21/33 (63%), Gaps = 1/33 (3%)
Query: 572 VGERGLKLSGGEKQRVAIALNSLVDKPLVFRWD 604
+GE G+ LSGG++ R+++A ++ ++ D
Sbjct: 152 LGEGGVTLSGGQRARISLA-RAVYKDADLYLLD 183
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 230
Score = 134 bits (338), Expect = 6e-36
Identities = 51/229 (22%), Positives = 88/229 (38%), Gaps = 46/229 (20%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQA----IGVVPQDTVLFN 991
+G SG+GKST++ ++ G+++IDN + L + IG V Q L
Sbjct: 37 MGPSGSGKSTMLNIIGCLDKPTEGEVYIDNIKTNDLDDDELTKIRRDKIGFVFQQFNLIP 96
Query: 992 N-SIKFNIQYARI--NASEEEVKEAATSADIHERILSFPDGYDTQYARINASEEEVKEAA 1048
+ N++ I +E A ++ + +
Sbjct: 97 LLTALENVELPLIFKYRGAMSGEERRKRALECLKMAELEERFANHK-------------- 142
Query: 1049 TSADIHERILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTK 1108
++ LSGG++QRVAIAR L P I+L D+ T ALD+K
Sbjct: 143 ----PNQ-------------------LSGGQQQRVAIARALANNPPIILADQPTGALDSK 179
Query: 1109 TERNIQSALNRVCASR--TTIIVAHRLSTIIHADEILVMHAGEIVERGR 1155
T I L ++ T ++V H ++ + I+ + GE+ +
Sbjct: 180 TGEKIMQLLKKLNEEDGKTVVVVTHDINVARFGERIIYLKDGEVEREEK 228
Score = 33.3 bits (76), Expect = 0.13
Identities = 13/26 (50%), Positives = 18/26 (69%), Gaps = 1/26 (3%)
Query: 579 LSGGEKQRVAIALNSLVDKPLVFRWD 604
LSGG++QRVAIA +L + P + D
Sbjct: 146 LSGGQQQRVAIA-RALANNPPIILAD 170
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12
uptake, BtuD {Escherichia coli [TaxId: 562]}
Length = 231
Score = 123 bits (309), Expect = 5e-32
Identities = 51/242 (21%), Positives = 89/242 (36%), Gaps = 55/242 (22%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQ-DTVLFNNSI 994
VG +GAGKST++ + G I Q ++ S L + Q T F +
Sbjct: 31 VGPNGAGKSTLLARMAGMTS-GKGSIQFAGQPLEAWSATKLALHRAYLSQQQTPPFATPV 89
Query: 995 KFNIQYARINASEEEVKEAATSADIHERILSFPDGYDTQYARINASEEEVKEAATSADIH 1054
+ + + + E+ A
Sbjct: 90 WHYLTLHQHDKTRTELLNDVAGAL------------------------------------ 113
Query: 1055 ERILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLK-------APQIVLLDEATSALDT 1107
D ++G +LSGGE QRV +A +L+ A Q++LLDE ++LD
Sbjct: 114 --------ALDDKLGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLLDEPMNSLDV 165
Query: 1108 KTERNIQSALNRVCASRTTII-VAHRLSTII-HADEILVMHAGEIVERGRHEELLERNGV 1165
+ + L+ +C I+ +H L+ + HA ++ G+++ GR EE+L +
Sbjct: 166 AQQSALDKILSALCQQGLAIVMSSHDLNHTLRHAHRAWLLKGGKMLASGRREEVLTPPNL 225
Query: 1166 YA 1167
Sbjct: 226 AQ 227
Score = 27.6 bits (61), Expect = 7.4
Identities = 13/38 (34%), Positives = 18/38 (47%)
Query: 572 VGERGLKLSGGEKQRVAIALNSLVDKPLVFRWDYVLIF 609
+G +LSGGE QRV +A L P +L+
Sbjct: 119 LGRSTNQLSGGEWQRVRLAAVVLQITPQANPAGQLLLL 156
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease
{Salmonella typhimurium [TaxId: 90371]}
Length = 258
Score = 118 bits (298), Expect = 3e-30
Identities = 57/244 (23%), Positives = 95/244 (38%), Gaps = 55/244 (22%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVS-------------QASLRQAIGV 982
+G SG+GKST +R + G I ++ QNI V LR + +
Sbjct: 34 IGSSGSGKSTFLRCINFLEKPSEGAIIVNGQNINLVRDKDGQLKVADKNQLRLLRTRLTM 93
Query: 983 VPQDTVLFNNSIKFNIQYARINASEEEVKEAATSADIHERILSFPDGYDTQYARINASE- 1041
V Q L+++ + E ++ P Q ++ +
Sbjct: 94 VFQHFNLWSH------------------------MTVLENVMEAP----IQVLGLSKHDA 125
Query: 1042 -EEVKEAATSADIHERILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLKAPQIVLLDE 1100
E + I ER Y LSGG++QRV+IAR L P ++L DE
Sbjct: 126 RERALKYLAKVGIDERAQ---GKYPVH-------LSGGQQQRVSIARALAMEPDVLLFDE 175
Query: 1101 ATSALDTKTERNIQSALNRVCASRTTII-VAHRLSTIIH-ADEILVMHAGEIVERGRHEE 1158
TSALD + + + ++ T++ V H + H + ++ +H G+I E G E+
Sbjct: 176 PTSALDPELVGEVLRIMQQLAEEGKTMVVVTHEMGFARHVSSHVIFLHQGKIEEEGDPEQ 235
Query: 1159 LLER 1162
+
Sbjct: 236 VFGN 239
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal
domain {Pyrococcus horikoshii [TaxId: 53953]}
Length = 239
Score = 117 bits (296), Expect = 3e-30
Identities = 53/231 (22%), Positives = 100/231 (43%), Gaps = 45/231 (19%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNN-SI 994
+G SG GK+T +R++ + G I+ ++++ + + I +V Q ++ + ++
Sbjct: 38 LGPSGCGKTTTLRMIAGLEEPTEGRIYFGDRDVTYLPPK--DRNISMVFQSYAVWPHMTV 95
Query: 995 KFNIQYARINASEEEVKEAATSADIHERILSFPDGYDTQYARINASEEEVKEAATSADIH 1054
NI + +I +R V+ AA I
Sbjct: 96 YENIAFPLKIKKF-------PKDEIDKR---------------------VRWAAELLQIE 127
Query: 1055 ERILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQ 1114
E + +P +LSGG++QRVA+AR ++ P ++L+DE S LD K ++
Sbjct: 128 ELLNRYPA-----------QLSGGQRQRVAVARAIVVEPDVLLMDEPLSNLDAKLRVAMR 176
Query: 1115 SALNRVCASR--TTIIVAHRLSTIIH-ADEILVMHAGEIVERGRHEELLER 1162
+ + ++ TTI V H + D I VM+ G++++ G E+ R
Sbjct: 177 AEIKKLQQKLKVTTIYVTHDQVEAMTMGDRIAVMNRGQLLQIGSPTEVYLR 227
Score = 29.7 bits (67), Expect = 1.7
Identities = 13/26 (50%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Query: 579 LSGGEKQRVAIALNSLVDKPLVFRWD 604
LSGG++QRVA+A ++V +P V D
Sbjct: 137 LSGGQRQRVAVA-RAIVVEPDVLLMD 161
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein
MetN {Escherichia coli [TaxId: 562]}
Length = 240
Score = 118 bits (296), Expect = 3e-30
Identities = 61/234 (26%), Positives = 101/234 (43%), Gaps = 46/234 (19%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVS---QASLRQAIGVVPQDTVLFNN 992
+G SGAGKST+IR + G + +D Q + T+S R+ IG++ Q L ++
Sbjct: 37 IGASGAGKSTLIRCVNLLERPTEGSVLVDGQELTTLSESELTKARRQIGMIFQHFNLLSS 96
Query: 993 -SIKFNIQYARINASEEEVKEAATSADIHERILSFPDGYDTQYARINASEEEVKEAATSA 1051
++ N+ + ++ R V E +
Sbjct: 97 RTVFGNVALPLELDN-------TPKDEVKRR---------------------VTELLSLV 128
Query: 1052 DIHERILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTER 1111
+ ++ S+P LSGG+KQRVAIAR L P+++L DEATSALD T R
Sbjct: 129 GLGDKHDSYPS-----------NLSGGQKQRVAIARALASNPKVLLCDEATSALDPATTR 177
Query: 1112 NIQSALNRVCAS--RTTIIVAHRLSTIIH-ADEILVMHAGEIVERGRHEELLER 1162
+I L + T +++ H + + D + V+ GE++E+ E+
Sbjct: 178 SILELLKDINRRLGLTILLITHEMDVVKRICDCVAVISNGELIEQDTVSEVFSH 231
Score = 31.8 bits (72), Expect = 0.35
Identities = 15/26 (57%), Positives = 17/26 (65%), Gaps = 1/26 (3%)
Query: 579 LSGGEKQRVAIALNSLVDKPLVFRWD 604
LSGG+KQRVAIA +L P V D
Sbjct: 141 LSGGQKQRVAIA-RALASNPKVLLCD 165
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii
[TaxId: 2190]}
Length = 254
Score = 116 bits (292), Expect = 1e-29
Identities = 50/231 (21%), Positives = 93/231 (40%), Gaps = 30/231 (12%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASL-RQAIGVVPQDTVLFNN-S 993
+G +G+GKST+I ++ F + G ++ +N++I A L I Q +
Sbjct: 36 IGPNGSGKSTLINVITGFLKADEGRVYFENKDITNKEPAELYHYGIVRTFQTPQPLKEMT 95
Query: 994 IKFNIQYARINASEEEVKEAATSADIHERILSFPDGYDTQYARINASEEEVKEAATSADI 1053
+ N+ I Y + E+ +
Sbjct: 96 VLENLLIGEI---------------CPGESPLNSLFYKKWIPKEEEMVEKAFKIL----- 135
Query: 1054 HERILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNI 1113
L YD + GE LSGG+ + V I R L+ P+++++DE + + +I
Sbjct: 136 --EFLKLSHLYDRKAGE----LSGGQMKLVEIGRALMTNPKMIVMDEPIAGVAPGLAHDI 189
Query: 1114 QSALNRVCASRTTII-VAHRLSTIIH-ADEILVMHAGEIVERGRHEELLER 1162
+ + + A T + + HRL +++ D + VM G+I+ GR EE ++
Sbjct: 190 FNHVLELKAKGITFLIIEHRLDIVLNYIDHLYVMFNGQIIAEGRGEEEIKN 240
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK,
N-terminal domain {Archaeon Thermococcus litoralis
[TaxId: 2265]}
Length = 240
Score = 107 bits (269), Expect = 1e-26
Identities = 51/234 (21%), Positives = 97/234 (41%), Gaps = 45/234 (19%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQA----IGVVPQDTVLFN 991
+G SG GK+T +R++ + G I+I ++ + + I +V Q L+
Sbjct: 35 LGPSGCGKTTTLRMIAGLEEPSRGQIYIGDKLVADPEKGIFVPPKDRDIAMVFQSYALYP 94
Query: 992 NSIKFNIQYARINASEEEVKEAATSADIHERILSFPDGYDTQYARINASEEEVKEAATSA 1051
+ ++ + + +E ++ V+E A
Sbjct: 95 HMTVYDNIAFPLKLRKVPRQEI---------------------------DQRVREVAELL 127
Query: 1052 DIHERILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTER 1111
+ E + P +LSGG++QRVA+ R +++ PQ+ L+DE S LD K
Sbjct: 128 GLTELLNRKPR-----------ELSGGQRQRVALGRAIVRKPQVFLMDEPLSNLDAKLRV 176
Query: 1112 NIQSALNRVCASR--TTIIVAHRLSTIIH-ADEILVMHAGEIVERGRHEELLER 1162
+++ L ++ TTI V H + D I VM+ G + + G +E+ ++
Sbjct: 177 RMRAELKKLQRQLGVTTIYVTHDQVEAMTMGDRIAVMNRGVLQQVGSPDEVYDK 230
Score = 34.5 bits (79), Expect = 0.055
Identities = 14/26 (53%), Positives = 19/26 (73%), Gaps = 1/26 (3%)
Query: 579 LSGGEKQRVAIALNSLVDKPLVFRWD 604
LSGG++QRVA+ ++V KP VF D
Sbjct: 140 LSGGQRQRVALG-RAIVRKPQVFLMD 164
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga
maritima [TaxId: 2336]}
Length = 238
Score = 100 bits (249), Expect = 5e-24
Identities = 54/229 (23%), Positives = 89/229 (38%), Gaps = 41/229 (17%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 995
+G +GAGK+T +R++ SG + + +N+ +R+ I +P++ + N
Sbjct: 34 IGPNGAGKTTTLRIISTLIKPSSGIVTVFGKNVVEEPHE-VRKLISYLPEEAGAYRNMQG 92
Query: 996 FNIQYARINASEEEVKEAATSADIHERILSFPDGYDTQYARINASEEEVKEAATSADIHE 1055
E EE V+ A A + E
Sbjct: 93 IEYLRFVAGFYASSSSEI---------------------------EEMVERATEIAGLGE 125
Query: 1056 RILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQS 1115
+I S G +++ IAR L+ P++ +LDE TS LD R ++
Sbjct: 126 KIKDRVST-----------YSKGMVRKLLIARALMVNPRLAILDEPTSGLDVLNAREVRK 174
Query: 1116 ALNRVCASRTTII-VAHRLSTIIH-ADEILVMHAGEIVERGRHEELLER 1162
L + TI+ +H + + D I ++H G IVE G EEL ER
Sbjct: 175 ILKQASQEGLTILVSSHNMLEVEFLCDRIALIHNGTIVETGTVEELKER 223
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK,
N-terminal domain {Escherichia coli [TaxId: 562]}
Length = 232
Score = 99.6 bits (248), Expect = 7e-24
Identities = 60/231 (25%), Positives = 96/231 (41%), Gaps = 45/231 (19%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 995
VG SG GKST++R++ + SGD+FI + + A + +G+V Q L+ +
Sbjct: 32 VGPSGCGKSTLLRMIAGLETITSGDLFIGEKRMNDTPPA--ERGVGMVFQSYALYPHLSV 89
Query: 996 F-NIQYARINASEEEVKEAATSADIHERILSFPDGYDTQYARINASEEEVKEAATSADIH 1054
N+ + A G + + V + A +
Sbjct: 90 AENMSFGLKLA-----------------------GAKKEVIN-----QRVNQVAEVLQLA 121
Query: 1055 ERILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQ 1114
+ P LSGG++QRVAI RTL+ P + LLDE S LD ++
Sbjct: 122 HLLDRKPK-----------ALSGGQRQRVAIGRTLVAEPSVFLLDEPLSNLDAALRVQMR 170
Query: 1115 SALNRV--CASRTTIIVAHRLSTIIH-ADEILVMHAGEIVERGRHEELLER 1162
++R+ RT I V H + AD+I+V+ AG + + G+ EL
Sbjct: 171 IEISRLHKRLGRTMIYVTHDQVEAMTLADKIVVLDAGRVAQVGKPLELYHY 221
Score = 32.2 bits (73), Expect = 0.29
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 579 LSGGEKQRVAIALNSLVDKPLVFR 602
LSGG++QRVAI + + +
Sbjct: 131 LSGGQRQRVAIGRTLVAEPSVFLL 154
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter
{Thermotoga maritima, TM1139 [TaxId: 2336]}
Length = 240
Score = 99.2 bits (247), Expect = 1e-23
Identities = 50/231 (21%), Positives = 88/231 (38%), Gaps = 43/231 (18%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVS-QASLRQAIGVVPQDTVLFNN-S 993
+G +GAGK+T + + + G I + Q+I R I +VP+ +F +
Sbjct: 38 IGANGAGKTTTLSAIAGLVRAQKGKIIFNGQDITNKPAHVINRMGIALVPEGRRIFPELT 97
Query: 994 IKFNIQYARINASEEEVKEAATSADIHERILSFPDGYDTQYARINASEEEVKEAATSADI 1053
+ N+ A +E +K
Sbjct: 98 VYENLMM---------------------------------GAYNRKDKEGIKRDL----- 119
Query: 1054 HERILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNI 1113
E I S ++ + G LSGGE+Q +AI R L+ P+++++DE + L +
Sbjct: 120 -EWIFSLFPRLKERLKQLGGTLSGGEQQMLAIGRALMSRPKLLMMDEPSLGLAPILVSEV 178
Query: 1114 QSALNRVCASRTTII-VAHRLSTIIH-ADEILVMHAGEIVERGRHEELLER 1162
+ ++ TTI+ V + A V+ G+IV G+ ELL+
Sbjct: 179 FEVIQKINQEGTTILLVEQNALGALKVAHYGYVLETGQIVLEGKASELLDN 229
Score = 30.3 bits (68), Expect = 1.1
Identities = 8/12 (66%), Positives = 10/12 (83%)
Query: 579 LSGGEKQRVAIA 590
LSGGE+Q +AI
Sbjct: 140 LSGGEQQMLAIG 151
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus
furiosus [TaxId: 2261]}
Length = 200
Score = 96.1 bits (239), Expect = 4e-23
Identities = 32/212 (15%), Positives = 82/212 (38%), Gaps = 49/212 (23%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNN-SI 994
G +G GK+T+++ + + G+I + I ++ I +P++ ++ S+
Sbjct: 33 HGPNGIGKTTLLKTISTYLKPLKGEIIYNGVPIT-----KVKGKIFFLPEEIIVPRKISV 87
Query: 995 KFNIQYARINASEEEVKEAATSADIHERILSFPDGYDTQYARINASEEEVKEAATSADIH 1054
+ ++ + ++ E+ +A S ++
Sbjct: 88 EDYLKAVA------------------------------SLYGVKVNKNEIMDALESVEVL 117
Query: 1055 ERILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQ 1114
+ ++ +LS G +RV +A TLL +I +LD+ A+D ++ +
Sbjct: 118 DL------------KKKLGELSQGTIRRVQLASTLLVNAEIYVLDDPVVAIDEDSKHKVL 165
Query: 1115 SALNRVCASRTTIIVAHRLSTIIHADEILVMH 1146
++ + + +I++ R + + D +H
Sbjct: 166 KSILEILKEKGIVIISSR-EELSYCDVNENLH 196
>d2onka1 c.37.1.12 (A:1-240) Molybdate/tungstate import ATP-binding
protein WtpC (ModC) {Archaeoglobus fulgidus [TaxId:
2234]}
Length = 240
Score = 95.9 bits (238), Expect = 2e-22
Identities = 67/231 (29%), Positives = 97/231 (41%), Gaps = 47/231 (20%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 995
+G +GAGKS + L+ + G++ ++ +I + R+ IG VPQD LF +
Sbjct: 30 LGPTGAGKSVFLELIAGIVKPDRGEVRLNGADITPLPPE--RRGIGFVPQDYALFPHLSV 87
Query: 996 F-NIQYARINASEEEVKEAATSADIHERILSFPDGYDTQYARINASEEEVKEAATSADIH 1054
+ NI Y N E V+E A I
Sbjct: 88 YRNIAYGLRNVERVERDRR------------------------------VREMAEKLGIA 117
Query: 1055 ERILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQ 1114
+ P LSGGE+QRVA+AR L+ P+++LLDE SA+D KT+ +
Sbjct: 118 HLLDRKPAR-----------LSGGERQRVALARALVIQPRLLLLDEPLSAVDLKTKGVLM 166
Query: 1115 SALNRV--CASRTTIIVAHRLSTIIH-ADEILVMHAGEIVERGRHEELLER 1162
L V + V H L ADE+ VM G IVE+G+ +EL
Sbjct: 167 EELRFVQREFDVPILHVTHDLIEAAMLADEVAVMLNGRIVEKGKLKELFSA 217
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV,
N-terminal domain {Archaeon Sulfolobus solfataricus
[TaxId: 2287]}
Length = 242
Score = 90.5 bits (224), Expect = 9e-21
Identities = 58/233 (24%), Positives = 107/233 (45%), Gaps = 44/233 (18%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLR---QAIGVVPQDTVLFNN 992
+G SGAGK+T +R++ +G+++ D++ + + + + + IG+V Q L+ N
Sbjct: 37 LGPSGAGKTTFMRIIAGLDVPSTGELYFDDRLVASNGKLIVPPEDRKIGMVFQTWALYPN 96
Query: 993 SIKFNIQYARINASEEEVKEAATSADIHERILSFPDGYDTQYARINASEEEVKEAATSAD 1052
T+ + L+ + V+E A D
Sbjct: 97 L---------------------TAFENIAFPLTN------MKMSKEEIRKRVEEVAKILD 129
Query: 1053 IHERILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERN 1112
IH + FP +LSG ++QRVA+AR L+K P ++LLDE S LD + +
Sbjct: 130 IHHVLNHFPR-----------ELSGAQQQRVALARALVKDPSLLLLDEPFSNLDARMRDS 178
Query: 1113 IQSALNRVCASR--TTIIVAHRLSTIIH-ADEILVMHAGEIVERGRHEELLER 1162
++ + V + T ++V+H + I AD + V+ G++V+ G+ E+L +
Sbjct: 179 ARALVKEVQSRLGVTLLVVSHDPADIFAIADRVGVLVKGKLVQVGKPEDLYDN 231
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter,
ATP-binding protein {Methanosarcina acetivorans [TaxId:
2214]}
Length = 229
Score = 86.7 bits (214), Expect = 1e-19
Identities = 59/230 (25%), Positives = 99/230 (43%), Gaps = 46/230 (20%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 995
+G +GAGK+ + L+ F+ +SG I +D +++ +S + I V Q+ LF +
Sbjct: 32 LGPTGAGKTLFLELIAGFHVPDSGRILLDGKDVTDLSPE--KHDIAFVYQNYSLFPHM-- 87
Query: 996 FNIQYARINASEEEVKEAATSADIHERILSFPDGYDTQYARINASEEEVKEAATSADIHE 1055
E + D + V + A I
Sbjct: 88 -------------------NVKKNLEFGMRMKKIKD---------PKRVLDTARDLKIEH 119
Query: 1056 RILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNIQS 1115
+ P LSGGE+QRVA+AR L+ P+I+LLDE SALD +T+ N +
Sbjct: 120 LLDRNPL-----------TLSGGEQQRVALARALVTNPKILLLDEPLSALDPRTQENARE 168
Query: 1116 ALNRV--CASRTTIIVAHRLSTIIH-ADEILVMHAGEIVERGRHEELLER 1162
L+ + T + + H + AD I V+ G++++ G+ EE+ E+
Sbjct: 169 MLSVLHKKNKLTVLHITHDQTEARIMADRIAVVMDGKLIQVGKPEEIFEK 218
>d1ye8a1 c.37.1.11 (A:1-178) Hypothetical kinase-like protein Aq_1292
{Aquifex aeolicus [TaxId: 63363]}
Length = 178
Score = 56.2 bits (134), Expect = 2e-09
Identities = 10/111 (9%), Positives = 26/111 (23%), Gaps = 2/111 (1%)
Query: 1054 HERILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLKAPQIVLLDEATSALDTKTERNI 1113
+ S V + + A +++++DE +
Sbjct: 61 SKFFTSKKLVGSYGVNVQYFEELAIPILERAYREAKKDRRKVIIIDEIGKMELFSKKFRD 120
Query: 1114 QSALNRVCASRTTIIVAHRLSTIIHADEILVMHAGEIVERGRH--EELLER 1162
+ + EI + ++E + +LE
Sbjct: 121 LVRQIMHDPNVNVVATIPIRDVHPLVKEIRRLPGAVLIELTPENRDVILED 171
Score = 50.0 bits (118), Expect = 3e-07
Identities = 6/74 (8%), Positives = 23/74 (31%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 995
G+ G GK+T+++ + + + + + + + I + + +
Sbjct: 6 TGEPGVGKTTLVKKIVERLGKRAIGFWTEEVRDPETKKRTGFRIITTEGKKKIFSSKFFT 65
Query: 996 FNIQYARINASEEE 1009
+ +
Sbjct: 66 SKKLVGSYGVNVQY 79
>g1f2t.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId:
2261]}
Length = 292
Score = 53.6 bits (127), Expect = 5e-08
Identities = 39/262 (14%), Positives = 81/262 (30%), Gaps = 43/262 (16%)
Query: 936 VGQSGAGKSTIIRLLFR--FYDVESGDIFIDNQNI------------------------- 968
+GQ+G+GKS+++ + ++ + DI D
Sbjct: 29 IGQNGSGKSSLLDAILVGLYWPLRIKDIKKDEFTKVGARDTYIDLIFEKDGTKYRITRRF 88
Query: 969 ----KTVSQASLRQAIGVVPQDTVLFNNSIKFNIQYARINASEEEVKEAATSADIHERIL 1024
+ ++++ +G + V +S + ++ + + IL
Sbjct: 89 LKGYSSGEIHAMKRLVGNEWKH-VTEPSSKAISAFMEKLIPYNIFLNAIYIRQGQIDAIL 147
Query: 1025 SFPDGYDTQYARINASEEEVKEAATSADIHERILSFPDGYDTQVGERGLK----LSGGEK 1080
ASE + V E + LSGGE+
Sbjct: 148 ESAREAALSKIGELASEIFAEFTEGKYSEVVVRAEENKVRLFVVWEGKERPLTFLSGGER 207
Query: 1081 QRV------AIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCAS-RTTIIVAHRL 1133
+ A++ L +++LDE T LD + R + + + R I+V+H
Sbjct: 208 IALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILVSHDE 267
Query: 1134 STIIHADEILVMHAGEIVERGR 1155
AD ++ + +
Sbjct: 268 ELKDAADHVIRISLENGSSKVE 289
>g1ii8.1 c.37.1.12 (A:,B:) Rad50 {Archaeon Pyrococcus furiosus [TaxId:
2261]}
Length = 369
Score = 53.7 bits (127), Expect = 6e-08
Identities = 18/76 (23%), Positives = 34/76 (44%), Gaps = 7/76 (9%)
Query: 1077 GGEKQRV------AIARTLLKAPQIVLLDEATSALDTKTERNIQSALNRVCAS-RTTIIV 1129
GGE+ + A++ L +++LDE T LD + R + + + R I+V
Sbjct: 281 GGERIALGLAFRLAMSLYLAGEISLLILDEPTPYLDEERRRKLITIMERYLKKIPQVILV 340
Query: 1130 AHRLSTIIHADEILVM 1145
+H AD ++ +
Sbjct: 341 SHDEELKDAADHVIRI 356
>d2i3ba1 c.37.1.11 (A:1-189) Cancer-related NTPase, C1orf57 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 189
Score = 37.7 bits (86), Expect = 0.004
Identities = 8/88 (9%), Positives = 20/88 (22%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 995
G G GK+T+I + + + + +
Sbjct: 7 TGPPGVGKTTLIHKASEVLKSSGVPVDGFYTEEVRQGGRRIGFDVVTLSGTRGPLSRVGL 66
Query: 996 FNIQYARINASEEEVKEAATSADIHERI 1023
R + V + + + +
Sbjct: 67 EPPPGKRECRVGQYVVDLTSFEQLALPV 94
>d1yj5a2 c.37.1.1 (A:351-522) 5' polynucleotide kinase-3' phosphatase,
C-terminal domain {Mouse (Mus musculus) [TaxId: 10090]}
Length = 172
Score = 36.4 bits (83), Expect = 0.009
Identities = 31/140 (22%), Positives = 45/140 (32%), Gaps = 10/140 (7%)
Query: 933 LLQVGQSGAGKSTIIRLLFRF--YDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLF 990
++ VG GAGKST I+ Y + D Q + QA+LRQ VV +T
Sbjct: 17 VVAVGFPGAGKSTFIQEHLVSAGYVHVNRDTLGSWQRCVSSCQAALRQGKRVVIDNTNPD 76
Query: 991 NNSIKFNIQYARINASEEEVKEAATSADI-----HERILSFPDG---YDTQYARINASEE 1042
S IQ A+ + + R ++ P D E
Sbjct: 77 VPSRARYIQCAKDAGVPCRCFNFCATIEQARHNNRFREMTDPSHAPVSDMVMFSYRKQFE 136
Query: 1043 EVKEAATSADIHERILSFPD 1062
A +I E +
Sbjct: 137 PPTLAEGFLEILEIPFRLQE 156
>d1zp6a1 c.37.1.25 (A:6-181) Hypothetical protein Atu3015
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 176
Score = 33.0 bits (74), Expect = 0.12
Identities = 10/42 (23%), Positives = 12/42 (28%), Gaps = 4/42 (9%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVE----SGDIFIDNQNIKTVSQ 973
G G+GKSTI L V D +
Sbjct: 10 SGHPGSGKSTIAEALANLPGVPKVHFHSDDLWGYIKHGRIDP 51
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces
cerevisiae) [TaxId: 4932]}
Length = 427
Score = 33.2 bits (74), Expect = 0.18
Identities = 18/73 (24%), Positives = 30/73 (41%), Gaps = 5/73 (6%)
Query: 1076 SGGEKQRVAIARTL----LKAPQIVLLDEATSALDTKTERNIQSALNRVCASRTTIIVA- 1130
SGGEK A+A + +LDE +ALD + I + + R IV
Sbjct: 334 SGGEKTVAALALLFAINSYQPSPFFVLDEVDAALDITNVQRIAAYIRRHRNPDLQFIVIS 393
Query: 1131 HRLSTIIHADEIL 1143
+ + +D ++
Sbjct: 394 LKNTMFEKSDALV 406
>d1dj0a_ d.265.1.1 (A:) Pseudouridine synthase I TruA {Escherichia
coli [TaxId: 562]}
Length = 264
Score = 32.3 bits (72), Expect = 0.26
Identities = 16/96 (16%), Positives = 25/96 (26%), Gaps = 6/96 (6%)
Query: 227 GTQLWMYKKYSNRATNVLPSKLYYFQIFMSVLMCLVVVVKYALEAALIHQ-RTLFMYQIV 285
G + + + + VVV A + H R + +
Sbjct: 151 GENDFTSFRAVQCQSR---TPWRNVMHINVTRHGPYVVVDIKANAFVHHMVRNIVGSLME 207
Query: 286 SGGLLLFSFTFATYLVSLERNYRLPTAPPQGHGLVL 321
G A L + +R TA GL L
Sbjct: 208 VGAHNQPESWIAELLAAKDRTLAAATAKA--EGLYL 241
>d1m8pa3 c.37.1.15 (A:391-573) ATP sulfurylase C-terminal domain
{Fungus (Penicillium chrysogenum) [TaxId: 5076]}
Length = 183
Score = 30.8 bits (68), Expect = 0.66
Identities = 7/33 (21%), Positives = 10/33 (30%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNI 968
G +GK I R L + + G
Sbjct: 12 TGYMNSGKDAIARALQVTLNQQGGRSVSLLLGD 44
>d1qhxa_ c.37.1.3 (A:) Chloramphenicol phosphotransferase
{Streptomyces venezuelae [TaxId: 54571]}
Length = 178
Score = 30.8 bits (68), Expect = 0.68
Identities = 10/39 (25%), Positives = 17/39 (43%), Gaps = 3/39 (7%)
Query: 927 SQLVWYLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDN 965
++++ G S AGKS I+R L +D+
Sbjct: 3 TRMIIL---NGGSSAGKSGIVRCLQSVLPEPWLAFGVDS 38
>d1azta2 c.37.1.8 (A:35-65,A:202-391) Transducin (alpha subunit) {Cow
(Bos taurus) [TaxId: 9913]}
Length = 221
Score = 30.9 bits (69), Expect = 0.70
Identities = 34/218 (15%), Positives = 65/218 (29%), Gaps = 34/218 (15%)
Query: 933 LLQVGQSGAGKSTIIRLLFRFYDV-----ESGDIFIDNQNIKTVSQASLRQAIGVVPQDT 987
LL +G +GKSTI++ + + V +D N R Q
Sbjct: 9 LLLLGAGESGKSTIVKQMRILHVVLTSGIFETKFQVDKVNFHMFDVGGQRDERRKWIQCF 68
Query: 988 VLFNNSIK--FNIQYARINASEEEVKEAATSADIHERILSFPDGYDTQ----YARINASE 1041
I + Y + + + + ++ + I + + +
Sbjct: 69 NDVTAIIFVVASSSYNMVIREDNQTNRLQEALNLFKSIWNNRWLRTISVILFLNKQDLLA 128
Query: 1042 EEVKEAATSADIHERILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLK---------- 1091
E+V + + + FP+ + GE RV A+ ++
Sbjct: 129 EKVLAGKSKIEDY-----FPE-FARYTTPEDATPEPGEDPRVTRAKYFIRDEFLRISTAS 182
Query: 1092 -APQIVLLDEATSALDTKTERNIQSALNRVCASRTTII 1128
+ T A+DT+ NI+ N R I
Sbjct: 183 GDGRHYCYPHFTCAVDTE---NIRRVFNDC---RDIIQ 214
>d2hyda2 f.37.1.1 (A:1-323) Putative multidrug export
ATP-binding/permease protein SAV1866 {Staphylococcus
aureus [TaxId: 1280]}
Length = 323
Score = 30.6 bits (67), Expect = 0.95
Identities = 43/267 (16%), Positives = 91/267 (34%), Gaps = 2/267 (0%)
Query: 594 LVDKPLVFRWDYVLIFVGFKFLQGGGTGGMGVLNNVRSLLWIGVQQYTTREIEIELFRHL 653
+ + L + + + +R L +I +L+ HL
Sbjct: 45 INNHALTTDEKVHHLTIAIGIALFIFVIVRPPIEFIRQYLAQWTSNKILYDIRKKLYNHL 104
Query: 654 HGLSLRWHLSRKTGEVLRVMNRGTDSISNLLNYVLFQIIPTILDIVIAIVFFVSTFSTWY 713
LS R++ + + G+V+ + + + + L I + I+IA+
Sbjct: 105 QALSARFYANNQVGQVISRVINDVEQTKDFILTGLMNIWLDCITIIIALSIMFFLDVKLT 164
Query: 714 GVIVFTTMALYLVTSIVVTEWRTKFQRKMNLADNALNTRSIDSLLNFETVKYYGAEEYEI 773
+ Y++T V K R+ + A + + + VK + E+ E
Sbjct: 165 -LAALFIFPFYILTVYVFFGRLRKLTRERSQALAEVQGFLHERVQGISVVKSFAIEDNEA 223
Query: 774 KEYGKAIQTYQVAEYQNSLSLVFLNSLQNLIITGGLLAGSLLCVHEVVNNQTLTVGDYTL 833
K + K + +++ + + N + G + + + ++ +TVG
Sbjct: 224 KNFDKKNTNFLTRALKHTRWNAYSFAAINTVTDIGPIIVIGVGAYLAISGS-ITVGTLAA 282
Query: 834 FVSYILQLYVPLNWFDALTRYLEASLV 860
FV Y+ L+ PL A L S
Sbjct: 283 FVGYLELLFGPLRRLVASFTTLTQSFA 309
>d2bdta1 c.37.1.25 (A:1-176) Hypothetical protein BH3686 {Bacillus
halodurans [TaxId: 86665]}
Length = 176
Score = 30.0 bits (66), Expect = 1.3
Identities = 11/32 (34%), Positives = 13/32 (40%), Gaps = 3/32 (9%)
Query: 936 VGQSGAGKSTIIRLLFRFYD---VESGDIFID 964
G +G GKST + L D GDI
Sbjct: 8 TGPAGVGKSTTCKRLAAQLDNSAYIEGDIINH 39
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin
zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Length = 273
Score = 30.3 bits (67), Expect = 1.3
Identities = 22/213 (10%), Positives = 48/213 (22%), Gaps = 23/213 (10%)
Query: 936 VGQSGAGKSTIIRLLFR-----FYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLF 990
GQ G+GK+++ +F +++ + N + + + + V +
Sbjct: 38 GGQPGSGKTSLRSAIFEETQGNVIVIDNDTFKQQHPNFDELVKLYEKDVVKHVTPYSNRM 97
Query: 991 NNSIKFNIQYARINASEEEVKEAATSADIHERILSFPDGYDTQYARINASEEEVKEAATS 1050
+I + N E +L Y
Sbjct: 98 TEAIISRLSDQGYNLVIEGTGRTTDVPIQTATMLQAKGYETKMYVMAVPKINSYLGTIER 157
Query: 1051 ADIHERILSFPDGYDTQ------VGERGLKLSGGEKQRVAIARTLLKAPQIVLLDEATSA 1104
+ + V L K + L + L +
Sbjct: 158 YETMYADDPMTARATPKQAHDIVVKNLPTNLETLHKTGLFSDIRLYNREGVKLYSSLETP 217
Query: 1105 LDTK------------TERNIQSALNRVCASRT 1125
+ + + IQ L R+
Sbjct: 218 SISPKETLEKELNRKVSGKEIQPTLERIEQKMV 250
>d2gjsa1 c.37.1.8 (A:91-258) Rad {Human (Homo sapiens) [TaxId:
9606]}
Length = 168
Score = 29.7 bits (65), Expect = 1.4
Identities = 9/40 (22%), Positives = 16/40 (40%)
Query: 930 VWYLLQVGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIK 969
V+ +L +G G GKS + R+ D + +
Sbjct: 1 VYKVLLLGAPGVGKSALARIFGGVEDGPEAEAAGHTYDRS 40
>d1q3ta_ c.37.1.1 (A:) CMP kinase {Streptococcus pneumoniae [TaxId:
1313]}
Length = 223
Score = 30.0 bits (66), Expect = 1.6
Identities = 8/29 (27%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
Query: 937 GQSGAGKSTIIRLL---FRFYDVESGDIF 962
G + +GKST+ +++ F F +++G ++
Sbjct: 10 GPASSGKSTVAKIIAKDFGFTYLDTGAMY 38
>d1ckea_ c.37.1.1 (A:) CMP kinase {Escherichia coli [TaxId: 562]}
Length = 225
Score = 29.6 bits (65), Expect = 1.6
Identities = 10/29 (34%), Positives = 19/29 (65%), Gaps = 3/29 (10%)
Query: 937 GQSGAGKSTIIRLL---FRFYDVESGDIF 962
G SGAGK T+ + + +++ ++SG I+
Sbjct: 10 GPSGAGKGTLCKAMAEALQWHLLDSGAIY 38
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal
domain {Thermotoga maritima [TaxId: 2336]}
Length = 225
Score = 29.7 bits (66), Expect = 1.8
Identities = 12/105 (11%), Positives = 39/105 (37%), Gaps = 6/105 (5%)
Query: 877 ICHLTKAVTRIVLKRIENKIEENMEEDQFGFRKGKGTRDAIGCLRMIALESQLVWYLLQ- 935
+ + T +V+ +++ E+++ + + G + + + + L+
Sbjct: 36 LAEKNELETVMVINKMDLYDEDDLRKVRELEEIYSGLYPIVKTSAKTGMGIEELKEYLKG 95
Query: 936 -----VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQAS 975
G SG GKS+++ + + ++ Q + + +
Sbjct: 96 KISTMAGLSGVGKSSLLNAINPGLKLRVSEVSEKLQRGRHTTTTA 140
>d1viaa_ c.37.1.2 (A:) Shikimate kinase (AroK) {Campylobacter jejuni
[TaxId: 197]}
Length = 161
Score = 29.1 bits (64), Expect = 2.1
Identities = 10/26 (38%), Positives = 13/26 (50%), Gaps = 5/26 (19%)
Query: 936 VGQSGAGKSTIIRLL-----FRFYDV 956
+G G+GKST+ R L F D
Sbjct: 6 IGFMGSGKSTLARALAKDLDLVFLDS 31
>d1zcba2 c.37.1.8 (A:47-75,A:202-372) Transducin (alpha subunit)
{Mouse (Mus musculus) [TaxId: 10090]}
Length = 200
Score = 29.1 bits (64), Expect = 2.1
Identities = 31/205 (15%), Positives = 66/205 (32%), Gaps = 23/205 (11%)
Query: 933 LLQVGQSGAGKSTIIRLLFRF---------YDVESGDIFIDNQNIKTVSQASLRQAIGVV 983
+L +G +GKST ++ R +I + V +
Sbjct: 5 ILLLGAGESGKSTFLK-QMRIIHGQDPTKGIHEYDFEIKNVPFKMVDVGGQRSERKRWFE 63
Query: 984 PQDTVLFNNSIKFNIQYARINASEEEVKEAATSADIHERILSFPDGYDTQYARINASEEE 1043
D+V + + ++ ++ + + S +I E I++ + +
Sbjct: 64 CFDSVTSILFLVSSSEFDQVLMEDRQTNRLTESLNIFETIVNNRVFSNVSIILFLNKTDL 123
Query: 1044 VKEAATSADIHERILSFPDGYDTQVGERGLKLSGGEKQRVAIARTLLKAPQIVLLDEATS 1103
++E I + F + R ++ E R Q L T+
Sbjct: 124 LEEKVQVVSIKD---YFLEFEGDPHCLRDVQKFLVECFR----GKRRDQQQRPLYHHFTT 176
Query: 1104 ALDTKTERNIQSALNRVCASRTTII 1128
A++T+ NI+ V + TI+
Sbjct: 177 AINTE---NIRLVFRDV---KDTIL 195
>d1kaga_ c.37.1.2 (A:) Shikimate kinase (AroK) {Escherichia coli
[TaxId: 562]}
Length = 169
Score = 28.9 bits (63), Expect = 2.4
Identities = 14/26 (53%), Positives = 14/26 (53%), Gaps = 5/26 (19%)
Query: 936 VGQSGAGKSTIIRLL-----FRFYDV 956
VG GAGKSTI R L FYD
Sbjct: 8 VGPMGAGKSTIGRQLAQQLNMEFYDS 33
>d2ot2a1 b.40.14.1 (A:1-90) Hydrogenase expression/formation protein
HypC {Escherichia coli [TaxId: 562]}
Length = 90
Score = 27.4 bits (61), Expect = 2.8
Identities = 9/33 (27%), Positives = 15/33 (45%), Gaps = 1/33 (3%)
Query: 581 GGEKQRVAIALNSLVDKPL-VFRWDYVLIFVGF 612
G ++ V + L D+ +VL+ VGF
Sbjct: 22 CGIQRDVDLTLVGSCDENGQPRVGQWVLVHVGF 54
>d1zina1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 182
Score = 28.7 bits (63), Expect = 2.8
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Query: 936 VGQSGAGKSTIIRLL---FRFYDVESGDIFIDNQNIKT 970
+G GAGK T + + + +GD+F T
Sbjct: 6 MGLPGAGKGTQAEKIVAAYGIPHISTGDMFRAAMKEGT 43
>d3b60a2 f.37.1.1 (A:10-328) Multidrug resistance ABC transporter
MsbA, N-terminal domain {Salmonella typhimurium [TaxId:
90371]}
Length = 319
Score = 29.1 bits (63), Expect = 3.1
Identities = 8/40 (20%), Positives = 15/40 (37%)
Query: 821 VNNQTLTVGDYTLFVSYILQLYVPLNWFDALTRYLEASLV 860
+LT G T+ S ++ L PL + + +
Sbjct: 265 SVMDSLTAGTITVVFSSMIALMRPLKSLTNVNAQFQRGMA 304
>d1gkya_ c.37.1.1 (A:) Guanylate kinase {Baker's yeast
(Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 186
Score = 28.8 bits (63), Expect = 3.1
Identities = 10/20 (50%), Positives = 13/20 (65%)
Query: 936 VGQSGAGKSTIIRLLFRFYD 955
G SG GKST+++ LF Y
Sbjct: 7 SGPSGTGKSTLLKKLFAEYP 26
>d1znwa1 c.37.1.1 (A:20-201) Guanylate kinase {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 182
Score = 28.8 bits (63), Expect = 3.2
Identities = 8/20 (40%), Positives = 10/20 (50%)
Query: 936 VGQSGAGKSTIIRLLFRFYD 955
G S GKST++R L
Sbjct: 8 SGPSAVGKSTVVRCLRERIP 27
>d1fftb2 f.17.2.1 (B:27-117) Cytochrome O ubiquinol oxidase, subunit
II {Escherichia coli [TaxId: 562]}
Length = 91
Score = 27.4 bits (61), Expect = 3.4
Identities = 11/77 (14%), Positives = 23/77 (29%), Gaps = 10/77 (12%)
Query: 276 QRTLFMYQIVSGGLLLFSFTFATYLVSL----ERNYRLPTAPPQGHGLVLLVFWT----- 326
QR+L + L++ + N +P H +
Sbjct: 14 QRSLILT-AFGLMLIVVIPAILMAVGFAWKYRASNKDAKYSPNWSHSNKVEAVVWTVPIL 72
Query: 327 MLLIFANLTFVNLKRLD 343
+++ A LT+ L+
Sbjct: 73 IIIFLAVLTWKTTHALE 89
>d1x6va3 c.37.1.4 (A:34-228) Adenosine-5'phosphosulfate kinase (APS
kinase) {Human (Homo sapiens) [TaxId: 9606]}
Length = 195
Score = 28.5 bits (62), Expect = 3.5
Identities = 8/33 (24%), Positives = 14/33 (42%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNI 968
G SGAGK+T+ L + + + +
Sbjct: 25 TGLSGAGKTTVSMALEEYLVCHGIPCYTLDGDN 57
>d2iyva1 c.37.1.2 (A:2-166) Shikimate kinase (AroK) {Mycobacterium
tuberculosis [TaxId: 1773]}
Length = 165
Score = 28.4 bits (62), Expect = 3.5
Identities = 11/27 (40%), Positives = 13/27 (48%), Gaps = 5/27 (18%)
Query: 936 VGQSGAGKSTIIRLL-----FRFYDVE 957
VG G+GKSTI R L D +
Sbjct: 7 VGLPGSGKSTIGRRLAKALGVGLLDTD 33
>d1knqa_ c.37.1.17 (A:) Gluconate kinase {Escherichia coli [TaxId:
562]}
Length = 171
Score = 28.5 bits (62), Expect = 3.5
Identities = 6/17 (35%), Positives = 10/17 (58%)
Query: 936 VGQSGAGKSTIIRLLFR 952
+G SG+GKS + +
Sbjct: 12 MGVSGSGKSAVASEVAH 28
>d1kgda_ c.37.1.1 (A:) Guanylate kinase-like domain of Cask {Human
(Homo sapiens) [TaxId: 9606]}
Length = 178
Score = 28.3 bits (62), Expect = 3.7
Identities = 5/17 (29%), Positives = 7/17 (41%)
Query: 936 VGQSGAGKSTIIRLLFR 952
+G G G+ I L
Sbjct: 9 LGAHGVGRRHIKNTLIT 25
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus
gallus), Va isoform [TaxId: 9031]}
Length = 730
Score = 29.0 bits (64), Expect = 4.3
Identities = 17/64 (26%), Positives = 29/64 (45%), Gaps = 2/64 (3%)
Query: 937 GQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKF 996
G+SGAGK+ + R++ SG N K ++ + ++IG T +NS +F
Sbjct: 101 GESGAGKTVSAKYAMRYFATVSGSASEANVEEKVLASNPIMESIGNAK--TTRNDNSSRF 158
Query: 997 NIQY 1000
Sbjct: 159 GKYI 162
>d1e6ca_ c.37.1.2 (A:) Shikimate kinase (AroK) {Erwinia chrysanthemi
[TaxId: 556]}
Length = 170
Score = 28.0 bits (61), Expect = 4.4
Identities = 9/38 (23%), Positives = 14/38 (36%), Gaps = 5/38 (13%)
Query: 936 VGQSGAGKSTIIRLL-----FRFYDVESGDIFIDNQNI 968
VG G G +T+ R L + F D + +
Sbjct: 8 VGARGCGMTTVGRELARALGYEFVDTDIFMQHTSGMTV 45
>d1s96a_ c.37.1.1 (A:) Guanylate kinase {Escherichia coli [TaxId:
562]}
Length = 205
Score = 28.3 bits (62), Expect = 4.6
Identities = 8/17 (47%), Positives = 12/17 (70%)
Query: 936 VGQSGAGKSTIIRLLFR 952
SGAGKS++I+ L +
Sbjct: 8 SAPSGAGKSSLIQALLK 24
>d2gj8a1 c.37.1.8 (A:216-376) Probable tRNA modification GTPase TrmE
(MnmE), G domain {Escherichia coli [TaxId: 562]}
Length = 161
Score = 27.8 bits (60), Expect = 4.7
Identities = 17/133 (12%), Positives = 37/133 (27%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIK 995
G+ AGKS+++ L DI +++ + ++ + +
Sbjct: 7 AGRPNAGKSSLLNALAGREAAIVTDIAGTTRDVLREHIHIDGMPLHIIDTAGLREASDEV 66
Query: 996 FNIQYARINASEEEVKEAATSADIHERILSFPDGYDTQYARINASEEEVKEAATSADIHE 1055
I R E+ D P ++ ++ + ADI
Sbjct: 67 ERIGIERAWQEIEQADRVLFMVDGTTTDAVDPAEIWPEFIARLPAKLPITVVRNKADITG 126
Query: 1056 RILSFPDGYDTQV 1068
L + +
Sbjct: 127 ETLGMSEVNGHAL 139
>d1nksa_ c.37.1.1 (A:) Adenylate kinase {Archaeon Sulfolobus
acidocaldarius [TaxId: 2285]}
Length = 194
Score = 28.1 bits (61), Expect = 4.7
Identities = 8/44 (18%), Positives = 13/44 (29%), Gaps = 8/44 (18%)
Query: 936 VGQSGAGKSTIIRLL--------FRFYDVESGDIFIDNQNIKTV 971
G G GKST++ + + GD +
Sbjct: 7 TGIPGVGKSTVLAKVKEILDNQGINNKIINYGDFMLATALKLGY 50
>d1khta_ c.37.1.1 (A:) Adenylate kinase {Archaeon Methanococcus
voltae [TaxId: 2188]}
Length = 190
Score = 28.0 bits (61), Expect = 4.9
Identities = 6/28 (21%), Positives = 10/28 (35%)
Query: 936 VGQSGAGKSTIIRLLFRFYDVESGDIFI 963
G G G +T +L E + +
Sbjct: 7 TGVPGVGSTTSSQLAMDNLRKEGVNYKM 34
>d1e4va1 c.37.1.1 (A:1-121,A:157-214) Adenylate kinase {Escherichia
coli [TaxId: 562]}
Length = 179
Score = 28.0 bits (61), Expect = 5.0
Identities = 9/61 (14%), Positives = 22/61 (36%), Gaps = 5/61 (8%)
Query: 936 VGQSGAGKSTIIRLL---FRFYDVESGDIFIDNQNIKTVSQASLRQAI--GVVPQDTVLF 990
+G AGK T + + + + +GD+ + + + G + D ++
Sbjct: 6 LGAPVAGKGTQAQFIMEKYGIPQISTGDMLRAAVKSGSELGKQAKDIMDAGKLVTDELVI 65
Query: 991 N 991
Sbjct: 66 A 66
>d1lvga_ c.37.1.1 (A:) Guanylate kinase {Mouse (Mus musculus)
[TaxId: 10090]}
Length = 190
Score = 28.0 bits (61), Expect = 5.1
Identities = 10/17 (58%), Positives = 14/17 (82%)
Query: 936 VGQSGAGKSTIIRLLFR 952
G SGAGKST+++ LF+
Sbjct: 6 SGPSGAGKSTLLKKLFQ 22
>d2z1ca1 b.40.14.1 (A:2-72) Hydrogenase expression/formation protein
HypC {Thermococcus kodakaraensis [TaxId: 311400]}
Length = 71
Score = 26.1 bits (58), Expect = 6.3
Identities = 9/32 (28%), Positives = 15/32 (46%), Gaps = 5/32 (15%)
Query: 581 GGEKQRVAIALNSLVDKPLVFRWDYVLIFVGF 612
GG K+ V + L + D+V++ GF
Sbjct: 21 GGVKREVRLDL---MPDTKP--GDWVIVHTGF 47
>d1ak2a1 c.37.1.1 (A:14-146,A:177-233) Adenylate kinase {Cow (Bos
taurus), mitochondrial izozyme-2 [TaxId: 9913]}
Length = 190
Score = 27.6 bits (60), Expect = 6.8
Identities = 10/38 (26%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Query: 936 VGQSGAGKSTIIRLL---FRFYDVESGDIFIDNQNIKT 970
+G GAGK T L F + +GD+ +
Sbjct: 9 LGPPGAGKGTQAPKLAKNFCVCHLATGDMLRAMVASGS 46
>d1jmma_ b.30.6.1 (A:) V-region of surface antigen I/II (SA I/II,
PAC) {Streptococcus mutans [TaxId: 1309]}
Length = 377
Score = 28.1 bits (62), Expect = 6.9
Identities = 11/30 (36%), Positives = 13/30 (43%), Gaps = 1/30 (3%)
Query: 930 VWYLLQVGQSGAGKSTIIRLLFRFYDVESG 959
V+ GQ S I+ F FYD E G
Sbjct: 192 VFASAYTGQVEKNTSIFIKNEFTFYD-EDG 220
>d1rkba_ c.37.1.1 (A:) Adenylate kinase {Human (Homo sapiens),
isoenzyme 6 [TaxId: 9606]}
Length = 173
Score = 27.6 bits (60), Expect = 7.5
Identities = 7/25 (28%), Positives = 13/25 (52%)
Query: 933 LLQVGQSGAGKSTIIRLLFRFYDVE 957
+L G G GK+T+ + L ++
Sbjct: 7 ILLTGTPGVGKTTLGKELASKSGLK 31
>d1akya1 c.37.1.1 (A:3-130,A:169-220) Adenylate kinase {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 180
Score = 27.6 bits (60), Expect = 7.7
Identities = 11/38 (28%), Positives = 15/38 (39%), Gaps = 3/38 (7%)
Query: 936 VGQSGAGKSTIIRLL---FRFYDVESGDIFIDNQNIKT 970
+G GAGK T L F + +GD+ T
Sbjct: 8 IGPPGAGKGTQAPNLQERFHAAHLATGDMLRSQIAKGT 45
>d1ly1a_ c.37.1.1 (A:) Polynucleotide kinase, kinase domain
{Bacteriophage T4 [TaxId: 10665]}
Length = 152
Score = 27.4 bits (59), Expect = 8.0
Identities = 7/17 (41%), Positives = 9/17 (52%)
Query: 936 VGQSGAGKSTIIRLLFR 952
+G G+GKST R
Sbjct: 8 IGCPGSGKSTWAREFIA 24
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium
discoideum, class-I myosin MyoE [TaxId: 44689]}
Length = 684
Score = 28.1 bits (62), Expect = 8.0
Identities = 14/64 (21%), Positives = 26/64 (40%)
Query: 937 GQSGAGKSTIIRLLFRFYDVESGDIFIDNQNIKTVSQASLRQAIGVVPQDTVLFNNSIKF 996
G+SGAGK+ + + +F S + + + I + S T+ +NS +F
Sbjct: 93 GESGAGKTEASKKIMQFLTFVSSNQSPNGERISKMLLDSNPLLEAFGNAKTLRNDNSSRF 152
Query: 997 NIQY 1000
Sbjct: 153 GKYM 156
>d1bifa1 c.37.1.7 (A:37-249)
6-phosphofructo-2-kinase/fructose-2,6-bisphosphatase,
kinase domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Length = 213
Score = 27.2 bits (59), Expect = 9.2
Identities = 7/34 (20%), Positives = 12/34 (35%), Gaps = 7/34 (20%)
Query: 936 VGQSGAGKSTIIRLLFRFY-------DVESGDIF 962
VG GK+ I + L R+ + +
Sbjct: 8 VGLPARGKTYISKKLTRYLNFIGVPTREFNVGQY 41
>d1s3ga1 c.37.1.1 (A:1-125,A:161-217) Adenylate kinase {Bacillus
globisporus [TaxId: 1459]}
Length = 182
Score = 27.2 bits (59), Expect = 9.8
Identities = 10/38 (26%), Positives = 16/38 (42%), Gaps = 3/38 (7%)
Query: 936 VGQSGAGKSTIIRLL---FRFYDVESGDIFIDNQNIKT 970
+G GAGK T + + + +GD+F T
Sbjct: 6 MGLPGAGKGTQADRIVEKYGTPHISTGDMFRAAIQEGT 43
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.324 0.139 0.412
Gapped
Lambda K H
0.267 0.0367 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 4,363,487
Number of extensions: 205071
Number of successful extensions: 861
Number of sequences better than 10.0: 1
Number of HSP's gapped: 834
Number of HSP's successfully gapped: 113
Length of query: 1192
Length of database: 2,407,596
Length adjustment: 96
Effective length of query: 1096
Effective length of database: 1,089,516
Effective search space: 1194109536
Effective search space used: 1194109536
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.0 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.6 bits)
S2: 58 (27.1 bits)