Query psy1324
Match_columns 115
No_of_seqs 117 out of 1086
Neff 10.2
Searched_HMMs 46136
Date Fri Aug 16 23:42:28 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy1324.a3m -d /work/01045/syshi/HHdatabase/Cdd.hhm -o /work/01045/syshi/hhsearch_cdd/1324hhsearch_cdd -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 TIGR02240 PHA_depoly_arom poly 99.9 6.1E-23 1.3E-27 135.3 10.4 94 1-94 28-126 (276)
2 PLN02824 hydrolase, alpha/beta 99.9 1.4E-22 3.1E-27 134.5 10.7 94 1-94 32-137 (294)
3 PLN02965 Probable pheophorbida 99.9 1.7E-22 3.7E-27 131.9 9.9 93 1-93 6-106 (255)
4 PRK03592 haloalkane dehalogena 99.9 4.3E-22 9.4E-27 132.3 11.2 93 1-93 30-127 (295)
5 PF12697 Abhydrolase_6: Alpha/ 99.9 1.1E-21 2.4E-26 123.8 11.5 97 1-97 1-104 (228)
6 PRK00870 haloalkane dehalogena 99.9 6.7E-22 1.5E-26 131.9 10.9 93 1-93 49-149 (302)
7 PRK10673 acyl-CoA esterase; Pr 99.9 1.6E-21 3.5E-26 126.6 11.0 94 1-94 19-116 (255)
8 PRK11126 2-succinyl-6-hydroxy- 99.9 2.4E-21 5.2E-26 125.1 11.3 93 1-94 5-102 (242)
9 PLN02679 hydrolase, alpha/beta 99.9 4.2E-21 9.1E-26 131.1 11.1 94 1-94 91-191 (360)
10 KOG4409|consensus 99.9 1.8E-21 3.9E-26 129.5 8.9 95 1-95 93-196 (365)
11 KOG4178|consensus 99.9 1.8E-21 3.9E-26 128.7 8.6 98 1-98 47-152 (322)
12 PRK10349 carboxylesterase BioH 99.9 5.7E-21 1.2E-25 124.6 10.4 93 1-94 16-109 (256)
13 PLN02578 hydrolase 99.9 1.1E-20 2.4E-25 128.7 11.1 94 1-94 89-187 (354)
14 PRK03204 haloalkane dehalogena 99.8 1.7E-20 3.7E-25 124.5 10.9 94 1-94 37-136 (286)
15 TIGR03611 RutD pyrimidine util 99.8 1.6E-20 3.4E-25 121.2 9.8 94 1-94 16-115 (257)
16 PLN03084 alpha/beta hydrolase 99.8 4.6E-20 1E-24 126.7 11.2 95 1-95 130-233 (383)
17 TIGR03056 bchO_mg_che_rel puta 99.8 6.2E-20 1.4E-24 120.2 10.9 94 1-94 31-130 (278)
18 TIGR02427 protocat_pcaD 3-oxoa 99.8 4.1E-20 8.9E-25 118.4 8.4 94 1-94 16-114 (251)
19 TIGR03343 biphenyl_bphD 2-hydr 99.8 1.1E-19 2.4E-24 119.7 10.3 93 1-93 33-135 (282)
20 PLN02211 methyl indole-3-aceta 99.8 9.4E-20 2E-24 120.4 10.0 94 1-94 21-122 (273)
21 PLN03087 BODYGUARD 1 domain co 99.8 1.3E-19 2.8E-24 127.2 11.1 94 1-94 204-309 (481)
22 TIGR03695 menH_SHCHC 2-succiny 99.8 1.7E-19 3.7E-24 115.3 10.5 94 1-94 4-105 (251)
23 PRK06489 hypothetical protein; 99.8 1.4E-19 3E-24 123.6 9.8 94 1-94 72-189 (360)
24 PLN02385 hydrolase; alpha/beta 99.8 2E-19 4.3E-24 122.3 9.8 94 1-94 90-197 (349)
25 PHA02857 monoglyceride lipase; 99.8 3E-19 6.4E-24 117.6 10.2 94 1-94 28-132 (276)
26 TIGR01738 bioH putative pimelo 99.8 3.7E-19 7.9E-24 113.8 9.6 93 1-94 7-100 (245)
27 PRK10749 lysophospholipase L2; 99.8 5.5E-19 1.2E-23 119.4 11.0 94 1-94 57-166 (330)
28 PRK08775 homoserine O-acetyltr 99.8 1.7E-19 3.6E-24 122.4 8.3 94 1-94 60-173 (343)
29 PLN02894 hydrolase, alpha/beta 99.8 1.1E-18 2.4E-23 120.7 11.0 94 1-94 108-211 (402)
30 PLN02298 hydrolase, alpha/beta 99.8 1.1E-18 2.3E-23 117.8 9.4 94 1-94 62-169 (330)
31 COG2267 PldB Lysophospholipase 99.8 4.5E-18 9.6E-23 113.7 9.9 97 1-97 37-145 (298)
32 TIGR01250 pro_imino_pep_2 prol 99.8 1E-17 2.2E-22 109.4 10.9 94 1-94 28-131 (288)
33 TIGR01392 homoserO_Ac_trn homo 99.8 3.4E-18 7.3E-23 116.4 8.7 95 1-95 34-163 (351)
34 PRK14875 acetoin dehydrogenase 99.8 9.2E-18 2E-22 114.4 10.5 94 1-94 134-232 (371)
35 TIGR03101 hydr2_PEP hydrolase, 99.7 2.9E-17 6.2E-22 108.1 11.1 95 1-95 28-135 (266)
36 TIGR01249 pro_imino_pep_1 prol 99.7 1.6E-17 3.6E-22 111.1 9.3 93 1-94 30-130 (306)
37 COG1647 Esterase/lipase [Gener 99.7 3.8E-17 8.3E-22 103.1 10.2 95 1-97 18-121 (243)
38 KOG1454|consensus 99.7 1.1E-17 2.4E-22 112.9 8.3 91 1-91 61-160 (326)
39 PRK07581 hypothetical protein; 99.7 1.2E-17 2.5E-22 113.2 7.8 95 1-95 44-160 (339)
40 PLN02980 2-oxoglutarate decarb 99.7 3.1E-17 6.6E-22 128.2 11.1 94 1-94 1374-1480(1655)
41 PRK00175 metX homoserine O-ace 99.7 6E-17 1.3E-21 111.4 9.0 95 1-95 51-183 (379)
42 PLN02652 hydrolase; alpha/beta 99.7 2E-16 4.4E-21 109.3 9.2 93 1-94 139-245 (395)
43 PRK05855 short chain dehydroge 99.7 3E-16 6.6E-21 112.1 10.4 94 1-94 28-131 (582)
44 PLN02511 hydrolase 99.7 4.5E-16 9.8E-21 107.4 8.7 94 1-94 103-210 (388)
45 KOG1455|consensus 99.7 7E-16 1.5E-20 101.4 9.1 94 1-94 57-164 (313)
46 TIGR03230 lipo_lipase lipoprot 99.6 2.7E-15 5.9E-20 104.3 11.1 96 1-96 44-156 (442)
47 PRK11071 esterase YqiA; Provis 99.6 2.1E-15 4.5E-20 95.1 8.8 86 1-95 4-94 (190)
48 PF12695 Abhydrolase_5: Alpha/ 99.6 3.7E-15 8.1E-20 89.3 9.2 90 1-93 2-94 (145)
49 TIGR03100 hydr1_PEP hydrolase, 99.6 9.5E-15 2.1E-19 96.6 10.8 94 1-95 29-135 (274)
50 PRK10985 putative hydrolase; P 99.6 8.6E-15 1.9E-19 98.9 10.4 95 1-95 61-169 (324)
51 cd00707 Pancreat_lipase_like P 99.6 6.8E-15 1.5E-19 97.5 9.2 96 1-96 39-149 (275)
52 PF00561 Abhydrolase_1: alpha/ 99.6 7.3E-15 1.6E-19 93.5 8.5 69 25-93 1-78 (230)
53 KOG2564|consensus 99.6 6.6E-15 1.4E-19 96.0 8.0 93 1-94 77-182 (343)
54 TIGR01607 PST-A Plasmodium sub 99.6 9.3E-15 2E-19 99.1 8.5 93 1-93 24-184 (332)
55 COG0596 MhpC Predicted hydrola 99.6 5.6E-14 1.2E-18 89.5 10.3 95 1-95 24-124 (282)
56 PRK05077 frsA fermentation/res 99.6 4.7E-14 1E-18 98.1 10.4 94 2-95 198-301 (414)
57 KOG2382|consensus 99.6 3E-14 6.6E-19 94.6 8.7 94 1-94 55-159 (315)
58 PRK10566 esterase; Provisional 99.5 7.5E-14 1.6E-18 90.7 10.0 92 1-92 30-140 (249)
59 TIGR01836 PHA_synth_III_C poly 99.5 3.3E-14 7.1E-19 96.9 8.2 95 1-95 65-172 (350)
60 PRK13604 luxD acyl transferase 99.5 2.8E-13 6.2E-18 90.4 10.1 93 1-95 40-142 (307)
61 PF00975 Thioesterase: Thioest 99.5 1E-12 2.2E-17 84.5 11.4 96 1-96 3-106 (229)
62 PF06342 DUF1057: Alpha/beta h 99.5 4.7E-13 1E-17 87.7 9.3 92 1-94 38-137 (297)
63 PLN00021 chlorophyllase 99.5 5.1E-13 1.1E-17 90.0 9.5 94 1-94 55-166 (313)
64 TIGR01840 esterase_phb esteras 99.4 1E-12 2.2E-17 83.9 9.1 95 1-95 16-131 (212)
65 KOG2984|consensus 99.4 6.7E-14 1.5E-18 87.8 3.4 95 1-95 45-150 (277)
66 PRK06765 homoserine O-acetyltr 99.4 1.2E-12 2.6E-17 90.4 9.0 96 1-96 59-198 (389)
67 TIGR01838 PHA_synth_I poly(R)- 99.4 1.2E-12 2.7E-17 93.2 9.0 95 1-95 191-303 (532)
68 TIGR02821 fghA_ester_D S-formy 99.4 7.9E-12 1.7E-16 82.8 10.1 94 1-94 45-173 (275)
69 PF07819 PGAP1: PGAP1-like pro 99.4 1.2E-11 2.6E-16 79.9 10.1 97 1-97 7-126 (225)
70 TIGR03502 lipase_Pla1_cef extr 99.4 7.2E-12 1.6E-16 92.3 9.6 80 1-80 452-576 (792)
71 PLN02872 triacylglycerol lipas 99.3 1.6E-12 3.5E-17 90.0 4.8 93 1-94 77-197 (395)
72 PLN02442 S-formylglutathione h 99.3 2.3E-11 4.9E-16 81.0 10.1 94 1-94 50-178 (283)
73 PRK07868 acyl-CoA synthetase; 99.3 1.3E-11 2.8E-16 93.8 7.1 91 1-94 70-177 (994)
74 PF10230 DUF2305: Uncharacteri 99.3 8.2E-11 1.8E-15 77.8 10.0 94 1-94 5-122 (266)
75 COG3208 GrsT Predicted thioest 99.3 3.1E-11 6.8E-16 77.7 7.6 95 1-95 10-113 (244)
76 PRK11460 putative hydrolase; P 99.3 9.7E-11 2.1E-15 76.0 9.9 94 1-94 19-138 (232)
77 TIGR00976 /NonD putative hydro 99.2 3.1E-11 6.6E-16 86.8 7.0 94 1-94 25-132 (550)
78 KOG1552|consensus 99.2 1.7E-10 3.7E-15 74.8 8.7 92 1-94 63-163 (258)
79 PF06821 Ser_hydrolase: Serine 99.2 9.3E-11 2E-15 72.8 7.2 90 1-96 1-93 (171)
80 PRK10252 entF enterobactin syn 99.2 3.3E-10 7.1E-15 87.8 11.3 94 1-94 1071-1171(1296)
81 PF03096 Ndr: Ndr family; Int 99.1 6.1E-10 1.3E-14 73.5 9.1 98 1-98 26-138 (283)
82 KOG2565|consensus 99.1 2.5E-10 5.5E-15 77.4 7.2 92 1-92 155-262 (469)
83 PLN02733 phosphatidylcholine-s 99.1 4.8E-10 1E-14 78.6 8.4 89 9-98 105-205 (440)
84 COG2021 MET2 Homoserine acetyl 99.1 4.3E-10 9.4E-15 76.2 7.7 104 1-104 54-192 (368)
85 PF02230 Abhydrolase_2: Phosph 99.1 1.5E-09 3.3E-14 69.5 9.2 96 1-96 17-142 (216)
86 KOG2931|consensus 99.1 1.1E-09 2.4E-14 72.3 8.2 97 1-97 49-160 (326)
87 PF12740 Chlorophyllase2: Chlo 99.1 2.4E-09 5.2E-14 70.1 9.4 94 1-94 20-131 (259)
88 KOG1838|consensus 99.1 2.7E-09 5.8E-14 73.5 9.6 94 1-94 128-235 (409)
89 PF06500 DUF1100: Alpha/beta h 99.0 1.6E-09 3.6E-14 74.8 8.2 100 1-100 193-302 (411)
90 COG3319 Thioesterase domains o 99.0 5.6E-09 1.2E-13 68.5 10.1 95 1-95 3-104 (257)
91 PF10503 Esterase_phd: Esteras 99.0 4.2E-09 9E-14 67.8 9.4 96 1-96 19-134 (220)
92 PF05057 DUF676: Putative seri 99.0 1.2E-09 2.7E-14 70.2 6.9 98 1-98 7-129 (217)
93 COG0400 Predicted esterase [Ge 99.0 2.8E-09 6E-14 68.0 8.3 98 1-98 21-138 (207)
94 PF01674 Lipase_2: Lipase (cla 99.0 1.1E-09 2.3E-14 70.5 6.4 93 1-94 4-123 (219)
95 PRK10162 acetyl esterase; Prov 99.0 4.9E-09 1.1E-13 70.9 9.6 94 1-94 84-195 (318)
96 PF12146 Hydrolase_4: Putative 99.0 9E-10 1.9E-14 60.1 4.7 53 1-53 19-78 (79)
97 PF05728 UPF0227: Uncharacteri 99.0 1.2E-08 2.5E-13 64.3 9.4 86 1-95 2-92 (187)
98 COG0429 Predicted hydrolase of 98.9 1.3E-08 2.8E-13 68.4 8.8 94 1-94 78-185 (345)
99 PF00151 Lipase: Lipase; Inte 98.9 3.3E-09 7.2E-14 72.1 6.1 96 1-96 74-189 (331)
100 PF06028 DUF915: Alpha/beta hy 98.9 4.1E-09 8.9E-14 69.2 6.2 97 1-97 14-146 (255)
101 PF00326 Peptidase_S9: Prolyl 98.9 9.9E-09 2.1E-13 65.5 7.5 79 16-94 5-99 (213)
102 COG1075 LipA Predicted acetylt 98.9 6.6E-09 1.4E-13 70.8 7.0 100 1-100 62-170 (336)
103 PF05990 DUF900: Alpha/beta hy 98.9 4.5E-08 9.7E-13 63.7 10.2 98 1-98 21-141 (233)
104 KOG4667|consensus 98.8 3.3E-08 7.1E-13 63.0 8.3 93 1-94 36-139 (269)
105 PF07859 Abhydrolase_3: alpha/ 98.8 1.4E-08 3E-13 64.5 6.4 94 1-94 1-110 (211)
106 TIGR01839 PHA_synth_II poly(R) 98.8 2.5E-08 5.3E-13 71.5 8.2 95 1-95 218-329 (560)
107 smart00824 PKS_TE Thioesterase 98.8 1.5E-07 3.1E-12 59.1 10.9 94 3-96 2-104 (212)
108 COG3545 Predicted esterase of 98.8 1.2E-07 2.6E-12 58.5 8.4 91 1-97 5-97 (181)
109 COG3509 LpqC Poly(3-hydroxybut 98.7 1.1E-07 2.5E-12 63.0 8.3 94 1-94 64-179 (312)
110 PF07224 Chlorophyllase: Chlor 98.7 6.5E-08 1.4E-12 63.3 6.8 93 1-94 49-157 (307)
111 COG1506 DAP2 Dipeptidyl aminop 98.7 6.2E-08 1.3E-12 70.9 6.9 92 1-93 397-506 (620)
112 PF01738 DLH: Dienelactone hyd 98.7 1.4E-07 3E-12 60.5 7.6 91 1-92 17-130 (218)
113 COG2945 Predicted hydrolase of 98.7 2.1E-07 4.6E-12 58.3 8.1 88 6-94 41-137 (210)
114 PF06057 VirJ: Bacterial virul 98.7 7.5E-08 1.6E-12 60.3 5.9 97 1-98 5-111 (192)
115 COG0412 Dienelactone hydrolase 98.7 3.5E-07 7.6E-12 59.6 9.1 93 1-94 30-146 (236)
116 COG4814 Uncharacterized protei 98.6 8.5E-07 1.9E-11 57.8 8.7 95 1-95 48-177 (288)
117 KOG2624|consensus 98.5 1.6E-07 3.4E-12 65.3 5.1 94 1-94 76-199 (403)
118 PLN02606 palmitoyl-protein thi 98.5 1.2E-06 2.6E-11 58.7 9.0 94 1-97 29-135 (306)
119 COG4757 Predicted alpha/beta h 98.5 4E-07 8.6E-12 58.7 6.0 72 6-77 38-123 (281)
120 TIGR01849 PHB_depoly_PhaZ poly 98.5 2.1E-06 4.6E-11 59.9 9.8 93 2-95 106-209 (406)
121 KOG4391|consensus 98.5 9.2E-08 2E-12 61.2 2.7 93 1-93 81-183 (300)
122 PF03403 PAF-AH_p_II: Platelet 98.5 7.1E-07 1.5E-11 61.9 7.0 94 1-95 103-263 (379)
123 PF05448 AXE1: Acetyl xylan es 98.5 2.3E-06 5E-11 58.1 9.3 93 1-94 86-209 (320)
124 PRK04940 hypothetical protein; 98.5 1.9E-06 4E-11 53.8 8.0 86 1-96 2-94 (180)
125 COG3571 Predicted hydrolase of 98.5 2E-06 4.4E-11 52.7 7.7 94 1-94 17-124 (213)
126 PLN02633 palmitoyl protein thi 98.4 3.3E-06 7.2E-11 56.7 9.0 93 1-96 28-133 (314)
127 KOG2541|consensus 98.4 4.2E-06 9.1E-11 55.0 8.1 95 1-96 26-130 (296)
128 PF02129 Peptidase_S15: X-Pro 98.4 3.8E-06 8.2E-11 55.7 8.0 72 22-93 55-135 (272)
129 COG4782 Uncharacterized protei 98.4 6.6E-06 1.4E-10 56.2 9.1 96 1-96 119-236 (377)
130 COG0657 Aes Esterase/lipase [L 98.4 2.7E-06 5.9E-11 57.3 7.4 94 1-97 82-194 (312)
131 COG4099 Predicted peptidase [G 98.3 4E-06 8.7E-11 56.1 7.6 95 1-95 194-305 (387)
132 PF12715 Abhydrolase_7: Abhydr 98.3 4.5E-06 9.7E-11 57.5 8.1 96 1-97 118-263 (390)
133 PF08538 DUF1749: Protein of u 98.3 5.5E-06 1.2E-10 55.6 8.1 95 1-95 36-149 (303)
134 PF02089 Palm_thioest: Palmito 98.3 5.1E-06 1.1E-10 55.2 7.6 94 1-95 8-117 (279)
135 PF02450 LCAT: Lecithin:choles 98.3 6.2E-06 1.4E-10 57.5 7.9 85 13-99 66-165 (389)
136 PF00756 Esterase: Putative es 98.2 3E-06 6.5E-11 55.2 5.4 50 44-93 97-149 (251)
137 PF09752 DUF2048: Uncharacteri 98.2 2.5E-05 5.3E-10 53.4 8.9 93 2-95 96-211 (348)
138 PRK10115 protease 2; Provision 98.2 1.1E-05 2.4E-10 59.9 7.4 94 1-94 448-559 (686)
139 PRK05371 x-prolyl-dipeptidyl a 98.1 2.2E-05 4.8E-10 59.0 8.8 76 19-94 273-373 (767)
140 KOG2112|consensus 98.1 2.5E-05 5.4E-10 49.6 7.7 95 1-95 6-129 (206)
141 PF05577 Peptidase_S28: Serine 98.1 4.5E-05 9.8E-10 53.8 9.8 79 17-95 50-149 (434)
142 KOG1553|consensus 98.1 1.1E-05 2.3E-10 55.2 6.2 68 23-91 267-342 (517)
143 PRK10439 enterobactin/ferric e 98.1 6.4E-05 1.4E-09 52.9 10.1 51 44-94 268-323 (411)
144 KOG3975|consensus 98.1 5.4E-05 1.2E-09 49.6 8.9 91 1-91 32-144 (301)
145 PTZ00472 serine carboxypeptida 98.1 3.2E-05 7E-10 55.1 8.6 94 1-94 80-216 (462)
146 PF12048 DUF3530: Protein of u 98.1 0.00016 3.4E-09 49.1 11.4 99 1-99 90-234 (310)
147 COG3458 Acetyl esterase (deace 98.1 2.1E-06 4.6E-11 56.6 2.3 87 1-88 86-204 (321)
148 COG3243 PhaC Poly(3-hydroxyalk 98.1 1.3E-05 2.8E-10 55.8 6.1 80 16-95 130-218 (445)
149 KOG3724|consensus 98.1 3.5E-05 7.7E-10 57.3 8.5 94 1-94 92-220 (973)
150 PF03959 FSH1: Serine hydrolas 98.1 3.8E-05 8.2E-10 49.3 7.7 95 1-96 7-147 (212)
151 KOG4627|consensus 98.1 9.1E-06 2E-10 51.8 4.7 91 1-94 70-172 (270)
152 cd00741 Lipase Lipase. Lipase 98.1 1.6E-05 3.4E-10 48.4 5.6 43 56-98 25-71 (153)
153 KOG2369|consensus 98.0 1.2E-05 2.5E-10 56.6 5.1 84 12-95 124-226 (473)
154 PF05677 DUF818: Chlamydia CHL 98.0 5.9E-05 1.3E-09 51.4 7.7 58 24-81 171-237 (365)
155 KOG3847|consensus 97.9 1.2E-05 2.6E-10 54.1 3.7 93 1-94 121-275 (399)
156 COG4188 Predicted dienelactone 97.9 2E-05 4.3E-10 54.1 4.4 81 1-81 74-181 (365)
157 PLN02517 phosphatidylcholine-s 97.9 7.1E-05 1.5E-09 54.4 6.8 84 13-96 157-265 (642)
158 cd00312 Esterase_lipase Estera 97.9 6.8E-05 1.5E-09 53.5 6.7 94 1-95 98-214 (493)
159 PF01764 Lipase_3: Lipase (cla 97.8 5.1E-05 1.1E-09 45.2 5.1 52 44-95 49-106 (140)
160 KOG1515|consensus 97.8 0.00021 4.6E-09 48.9 8.3 92 1-95 93-208 (336)
161 COG3150 Predicted esterase [Ge 97.8 0.00038 8.2E-09 43.1 8.1 84 1-93 2-90 (191)
162 KOG2281|consensus 97.7 9.9E-05 2.2E-09 54.0 6.0 69 20-88 671-756 (867)
163 PF11187 DUF2974: Protein of u 97.7 0.00012 2.6E-09 47.5 5.4 37 59-95 84-124 (224)
164 PF10340 DUF2424: Protein of u 97.7 0.00037 8.1E-09 48.3 7.7 93 1-94 125-235 (374)
165 cd00519 Lipase_3 Lipase (class 97.5 0.00027 5.9E-09 45.7 5.3 44 52-95 121-168 (229)
166 KOG2183|consensus 97.5 0.00062 1.3E-08 47.7 6.9 70 24-93 111-201 (492)
167 PF00135 COesterase: Carboxyle 97.5 0.00032 6.9E-09 50.3 5.7 93 1-93 128-244 (535)
168 PF02273 Acyl_transf_2: Acyl t 97.4 0.00081 1.7E-08 44.2 6.5 89 1-91 33-131 (294)
169 KOG4840|consensus 97.4 0.00057 1.2E-08 44.3 5.6 95 1-97 39-147 (299)
170 KOG2100|consensus 97.4 0.00065 1.4E-08 51.2 6.6 92 1-94 529-644 (755)
171 KOG3967|consensus 97.4 0.0013 2.8E-08 42.5 6.9 37 57-93 188-226 (297)
172 PF08840 BAAT_C: BAAT / Acyl-C 97.4 0.00092 2E-08 43.0 6.1 49 46-95 6-57 (213)
173 PLN00413 triacylglycerol lipas 97.3 0.00078 1.7E-08 47.9 6.0 52 44-95 269-328 (479)
174 KOG3101|consensus 97.3 0.00012 2.7E-09 46.9 1.8 93 1-93 47-175 (283)
175 COG2819 Predicted hydrolase of 97.3 0.00055 1.2E-08 45.3 4.8 47 58-104 136-182 (264)
176 PF06259 Abhydrolase_8: Alpha/ 97.3 0.0013 2.8E-08 41.2 6.1 53 44-96 89-146 (177)
177 PLN02162 triacylglycerol lipas 97.3 0.001 2.2E-08 47.3 5.8 49 49-97 268-324 (475)
178 PF05277 DUF726: Protein of un 97.3 0.0013 2.9E-08 45.2 6.3 44 57-100 218-266 (345)
179 COG2936 Predicted acyl esteras 97.2 0.0011 2.4E-08 48.2 5.9 74 22-95 78-160 (563)
180 PF03583 LIP: Secretory lipase 97.2 0.003 6.5E-08 42.5 7.7 76 17-92 19-111 (290)
181 KOG3043|consensus 97.2 0.00078 1.7E-08 43.5 4.4 80 14-94 56-154 (242)
182 PF11144 DUF2920: Protein of u 97.1 0.0052 1.1E-07 43.1 8.0 36 60-95 185-220 (403)
183 PF01083 Cutinase: Cutinase; 97.1 0.0016 3.5E-08 40.8 5.1 53 44-96 66-124 (179)
184 PF07082 DUF1350: Protein of u 97.1 0.0083 1.8E-07 39.5 8.3 84 11-95 33-126 (250)
185 COG3946 VirJ Type IV secretory 97.1 0.0032 6.8E-08 44.1 6.5 78 2-82 264-349 (456)
186 PF04301 DUF452: Protein of un 97.0 0.0021 4.6E-08 41.4 5.1 76 1-94 14-90 (213)
187 COG2272 PnbA Carboxylesterase 97.0 0.0016 3.5E-08 46.4 4.8 93 1-95 97-218 (491)
188 PLN02408 phospholipase A1 96.9 0.0023 4.9E-08 44.4 4.9 48 47-94 186-240 (365)
189 PLN02454 triacylglycerol lipas 96.9 0.0022 4.8E-08 45.1 4.8 31 49-79 216-248 (414)
190 COG0627 Predicted esterase [Ge 96.8 0.0022 4.8E-08 43.7 4.3 38 60-97 153-190 (316)
191 PLN02571 triacylglycerol lipas 96.8 0.0028 6.1E-08 44.6 4.5 35 45-79 210-246 (413)
192 PF11339 DUF3141: Protein of u 96.7 0.02 4.3E-07 41.6 8.5 36 59-94 140-175 (581)
193 PF00450 Peptidase_S10: Serine 96.7 0.018 3.9E-07 40.2 8.3 97 1-97 43-184 (415)
194 PLN02934 triacylglycerol lipas 96.7 0.0043 9.2E-08 44.7 5.0 52 44-95 306-365 (515)
195 KOG4372|consensus 96.7 0.0023 5E-08 44.6 3.5 79 1-79 83-170 (405)
196 PF11288 DUF3089: Protein of u 96.6 0.0064 1.4E-07 39.0 4.9 53 44-96 79-138 (207)
197 KOG2182|consensus 96.6 0.019 4E-07 41.3 7.5 72 24-95 118-208 (514)
198 PLN02310 triacylglycerol lipas 96.5 0.0094 2E-07 41.9 5.7 36 60-95 210-249 (405)
199 PLN02802 triacylglycerol lipas 96.3 0.0088 1.9E-07 43.1 4.7 33 48-80 317-351 (509)
200 PLN02324 triacylglycerol lipas 96.3 0.0084 1.8E-07 42.3 4.5 34 46-79 200-235 (415)
201 PLN03037 lipase class 3 family 96.1 0.011 2.3E-07 42.8 4.4 33 47-79 302-338 (525)
202 PLN02753 triacylglycerol lipas 95.9 0.016 3.5E-07 42.0 4.3 21 59-79 312-332 (531)
203 KOG4569|consensus 95.7 0.02 4.3E-07 39.5 4.2 51 44-94 156-212 (336)
204 PLN02719 triacylglycerol lipas 95.7 0.022 4.7E-07 41.2 4.3 21 60-80 299-319 (518)
205 PLN02213 sinapoylglucose-malat 95.6 0.06 1.3E-06 36.8 6.2 70 25-94 2-96 (319)
206 PLN02209 serine carboxypeptida 95.6 0.11 2.4E-06 37.2 7.6 73 24-96 117-214 (437)
207 KOG2551|consensus 95.6 0.068 1.5E-06 34.7 5.9 94 1-96 8-149 (230)
208 KOG1202|consensus 95.6 0.093 2E-06 42.1 7.5 90 1-95 2126-2220(2376)
209 PLN02761 lipase class 3 family 95.6 0.026 5.7E-07 40.9 4.4 20 60-79 295-314 (527)
210 COG2382 Fes Enterochelin ester 95.5 0.013 2.8E-07 39.5 2.5 39 59-97 177-215 (299)
211 KOG2237|consensus 95.4 0.015 3.3E-07 43.0 2.7 88 2-89 472-579 (712)
212 KOG2029|consensus 95.2 0.083 1.8E-06 39.1 5.8 41 58-98 525-576 (697)
213 PLN02847 triacylglycerol lipas 95.1 0.046 9.9E-07 40.4 4.4 25 55-79 247-271 (633)
214 PLN03016 sinapoylglucose-malat 94.7 0.21 4.5E-06 35.8 6.8 71 24-94 115-210 (433)
215 KOG2385|consensus 94.7 0.13 2.8E-06 37.5 5.7 48 56-103 444-496 (633)
216 COG4947 Uncharacterized protei 94.4 0.03 6.4E-07 35.2 1.8 36 59-94 101-136 (227)
217 COG1770 PtrB Protease II [Amin 93.7 0.16 3.6E-06 37.9 4.7 33 59-91 527-559 (682)
218 KOG1516|consensus 93.4 0.27 5.9E-06 35.9 5.6 50 47-96 181-234 (545)
219 COG2939 Carboxypeptidase C (ca 93.3 0.59 1.3E-05 34.0 6.9 82 1-82 104-221 (498)
220 KOG1282|consensus 93.0 0.48 1E-05 34.2 6.1 70 25-94 118-213 (454)
221 KOG1551|consensus 91.9 0.8 1.7E-05 31.0 5.6 72 22-93 139-229 (371)
222 PF05705 DUF829: Eukaryotic pr 91.7 2.5 5.4E-05 27.5 8.2 98 1-98 2-116 (240)
223 PF08237 PE-PPE: PE-PPE domain 91.3 2 4.3E-05 28.1 7.0 48 46-93 33-88 (225)
224 COG5153 CVT17 Putative lipase 91.1 0.37 8.1E-06 32.8 3.5 26 55-80 272-297 (425)
225 KOG4540|consensus 91.1 0.37 8.1E-06 32.8 3.5 26 55-80 272-297 (425)
226 TIGR03712 acc_sec_asp2 accesso 89.7 1.3 2.8E-05 32.3 5.4 61 31-94 322-389 (511)
227 KOG3253|consensus 89.2 0.51 1.1E-05 35.3 3.2 92 1-94 179-286 (784)
228 PRK12467 peptide synthase; Pro 88.4 7.1 0.00015 35.7 9.8 91 1-91 3695-3792(3956)
229 PF07519 Tannase: Tannase and 87.8 1.5 3.3E-05 31.8 4.9 36 59-94 115-150 (474)
230 PF10081 Abhydrolase_9: Alpha/ 84.3 2.7 5.8E-05 28.6 4.3 45 59-103 109-156 (289)
231 KOG1283|consensus 84.2 2.3 5E-05 29.6 4.0 57 24-80 71-143 (414)
232 smart00827 PKS_AT Acyl transfe 82.9 2.2 4.8E-05 28.5 3.7 29 50-78 73-101 (298)
233 cd07198 Patatin Patatin-like p 81.8 4 8.6E-05 25.2 4.3 33 49-81 16-48 (172)
234 cd07225 Pat_PNPLA6_PNPLA7 Pata 81.4 3.6 7.8E-05 28.2 4.2 63 12-80 2-64 (306)
235 COG1505 Serine proteases of th 81.0 0.7 1.5E-05 34.4 0.8 90 3-93 424-533 (648)
236 TIGR03131 malonate_mdcH malona 80.9 3 6.5E-05 28.0 3.7 29 49-77 66-94 (295)
237 PF00698 Acyl_transf_1: Acyl t 80.7 1.5 3.2E-05 29.9 2.2 30 49-78 74-103 (318)
238 PRK10279 hypothetical protein; 79.4 4.3 9.3E-05 27.8 4.1 33 49-81 23-55 (300)
239 PF09949 DUF2183: Uncharacteri 79.4 9.2 0.0002 21.7 7.6 77 13-89 12-97 (100)
240 cd07207 Pat_ExoU_VipD_like Exo 78.8 5.1 0.00011 25.0 4.1 31 51-81 19-49 (194)
241 COG1448 TyrB Aspartate/tyrosin 78.6 21 0.00047 25.5 8.8 82 1-93 174-264 (396)
242 TIGR00128 fabD malonyl CoA-acy 78.0 4.2 9E-05 27.1 3.7 28 51-78 74-102 (290)
243 COG1752 RssA Predicted esteras 78.0 4.5 9.7E-05 27.5 3.9 34 48-81 28-61 (306)
244 COG2830 Uncharacterized protei 77.7 3.4 7.4E-05 25.9 2.9 73 2-92 15-88 (214)
245 cd07227 Pat_Fungal_NTE1 Fungal 77.5 5.7 0.00012 26.7 4.2 32 49-80 28-59 (269)
246 PF05576 Peptidase_S37: PS-10 77.1 1.6 3.6E-05 31.2 1.6 71 24-94 88-169 (448)
247 cd07210 Pat_hypo_W_succinogene 76.5 6.7 0.00015 25.5 4.2 30 52-81 21-50 (221)
248 COG4553 DepA Poly-beta-hydroxy 75.4 25 0.00054 24.5 8.5 85 10-95 116-210 (415)
249 cd07228 Pat_NTE_like_bacteria 73.6 7.7 0.00017 24.0 3.8 30 52-81 21-50 (175)
250 cd07209 Pat_hypo_Ecoli_Z1214_l 73.3 8.8 0.00019 24.7 4.2 31 51-81 18-48 (215)
251 KOG0781|consensus 72.9 26 0.00056 26.1 6.6 66 5-73 445-512 (587)
252 COG4822 CbiK Cobalamin biosynt 71.5 26 0.00057 23.1 5.9 55 1-63 141-198 (265)
253 cd07230 Pat_TGL4-5_like Triacy 70.6 4.2 9.2E-05 29.2 2.4 35 50-84 92-126 (421)
254 KOG0736|consensus 70.2 53 0.0012 26.1 8.6 95 9-104 748-854 (953)
255 cd07205 Pat_PNPLA6_PNPLA7_NTE1 68.1 14 0.00031 22.7 4.2 29 52-80 21-49 (175)
256 cd07208 Pat_hypo_Ecoli_yjju_li 67.8 14 0.00031 24.5 4.3 31 52-82 19-50 (266)
257 KOG4388|consensus 67.4 4.4 9.6E-05 30.6 2.0 67 24-93 427-507 (880)
258 COG3933 Transcriptional antite 66.8 45 0.00097 24.5 6.7 69 1-74 112-180 (470)
259 cd07224 Pat_like Patatin-like 66.6 16 0.00034 24.0 4.3 33 49-81 17-51 (233)
260 TIGR02816 pfaB_fam PfaB family 66.6 10 0.00022 28.3 3.6 31 50-80 255-286 (538)
261 cd07232 Pat_PLPL Patain-like p 65.0 6.7 0.00015 28.1 2.5 39 49-87 85-123 (407)
262 cd07231 Pat_SDP1-like Sugar-De 62.6 10 0.00022 26.4 2.9 34 50-83 87-120 (323)
263 PF10142 PhoPQ_related: PhoPQ- 61.7 33 0.00071 24.4 5.3 48 48-96 158-208 (367)
264 cd07229 Pat_TGL3_like Triacylg 61.0 9.1 0.0002 27.3 2.5 38 50-87 102-139 (391)
265 COG4667 Predicted esterase of 60.3 16 0.00035 24.8 3.4 41 46-87 27-68 (292)
266 PF09994 DUF2235: Uncharacteri 60.1 22 0.00048 24.0 4.1 22 58-79 91-112 (277)
267 COG0218 Predicted GTPase [Gene 58.1 18 0.00039 23.4 3.3 12 27-38 72-83 (200)
268 cd01714 ETF_beta The electron 57.7 44 0.00095 21.4 5.1 51 26-80 79-134 (202)
269 PF00448 SRP54: SRP54-type pro 56.5 50 0.0011 21.0 6.3 72 18-92 76-150 (196)
270 cd07204 Pat_PNPLA_like Patatin 55.7 30 0.00065 22.8 4.2 20 62-81 34-53 (243)
271 cd07218 Pat_iPLA2 Calcium-inde 55.4 32 0.0007 22.8 4.3 20 62-81 33-52 (245)
272 cd07212 Pat_PNPLA9 Patatin-lik 53.1 40 0.00087 23.2 4.6 20 62-81 35-54 (312)
273 PF03283 PAE: Pectinacetyleste 53.0 30 0.00065 24.4 4.0 21 59-79 156-176 (361)
274 COG0331 FabD (acyl-carrier-pro 53.0 26 0.00056 24.2 3.6 22 57-78 83-104 (310)
275 cd07206 Pat_TGL3-4-5_SDP1 Tria 52.7 31 0.00066 23.8 3.9 27 55-81 93-119 (298)
276 cd01819 Patatin_and_cPLA2 Pata 52.3 40 0.00087 20.4 4.1 19 59-77 28-46 (155)
277 cd07220 Pat_PNPLA2 Patatin-lik 51.8 37 0.0008 22.6 4.1 22 60-81 37-58 (249)
278 PF14253 AbiH: Bacteriophage a 50.7 17 0.00036 24.0 2.4 14 58-71 234-247 (270)
279 cd07221 Pat_PNPLA3 Patatin-lik 50.6 43 0.00093 22.3 4.3 22 60-81 33-54 (252)
280 PF06838 Met_gamma_lyase: Meth 48.6 1E+02 0.0022 22.3 6.3 61 10-71 140-202 (403)
281 PF08484 Methyltransf_14: C-me 47.9 65 0.0014 19.9 5.0 43 46-88 54-98 (160)
282 COG0541 Ffh Signal recognition 47.9 1.1E+02 0.0024 22.5 6.5 69 19-90 176-247 (451)
283 PRK05665 amidotransferase; Pro 47.2 44 0.00095 22.1 3.9 34 44-77 75-108 (240)
284 COG3727 Vsr DNA G:T-mismatch r 45.5 33 0.00072 20.8 2.8 8 1-8 60-67 (150)
285 PRK09444 pntB pyridine nucleot 42.1 78 0.0017 23.3 4.7 63 1-63 309-386 (462)
286 PF10561 UPF0565: Uncharacteri 42.0 38 0.00082 23.4 3.1 37 59-95 193-245 (303)
287 PF01734 Patatin: Patatin-like 40.4 34 0.00074 20.6 2.6 22 59-80 27-48 (204)
288 cd07222 Pat_PNPLA4 Patatin-lik 40.1 64 0.0014 21.3 3.9 17 62-78 34-50 (246)
289 KOG2730|consensus 39.7 70 0.0015 21.4 3.8 39 44-82 80-118 (263)
290 PRK14194 bifunctional 5,10-met 39.4 63 0.0014 22.3 3.8 36 45-80 142-183 (301)
291 PF00484 Pro_CA: Carbonic anhy 38.7 46 0.001 20.0 2.9 33 44-76 40-72 (153)
292 PRK06731 flhF flagellar biosyn 38.6 1.2E+02 0.0027 20.5 8.2 75 14-91 142-220 (270)
293 COG1282 PntB NAD/NADP transhyd 38.6 1.1E+02 0.0025 22.0 4.9 63 1-63 311-388 (463)
294 KOG1411|consensus 38.0 36 0.00078 24.3 2.5 33 1-33 200-239 (427)
295 PRK14974 cell division protein 36.6 1.5E+02 0.0033 20.8 7.3 66 23-91 221-288 (336)
296 COG2201 CheB Chemotaxis respon 36.2 1.4E+02 0.0029 21.3 5.1 32 60-91 158-191 (350)
297 PF02633 Creatininase: Creatin 36.1 1.2E+02 0.0027 19.7 5.7 36 44-79 86-121 (237)
298 cd07213 Pat17_PNPLA8_PNPLA9_li 35.5 40 0.00087 22.7 2.4 19 62-80 37-55 (288)
299 PRK05368 homoserine O-succinyl 35.0 59 0.0013 22.5 3.2 31 46-79 124-154 (302)
300 TIGR01425 SRP54_euk signal rec 33.6 1.9E+02 0.0042 21.2 6.5 65 23-90 181-247 (429)
301 PRK09936 hypothetical protein; 31.7 1.8E+02 0.0038 20.2 4.9 29 10-38 36-65 (296)
302 TIGR03607 patatin-related prot 31.6 82 0.0018 24.8 3.7 22 57-78 64-85 (739)
303 PF07643 DUF1598: Protein of u 31.6 97 0.0021 17.1 3.8 32 48-79 32-63 (84)
304 TIGR02813 omega_3_PfaA polyket 31.6 61 0.0013 29.3 3.3 28 50-77 665-692 (2582)
305 COG3621 Patatin [General funct 31.5 1E+02 0.0022 21.9 3.8 52 24-81 8-64 (394)
306 PF03575 Peptidase_S51: Peptid 31.4 31 0.00068 20.8 1.3 14 60-73 69-82 (154)
307 cd07217 Pat17_PNPLA8_PNPLA9_li 31.3 53 0.0012 23.0 2.5 18 62-79 44-61 (344)
308 PF01118 Semialdhyde_dh: Semia 31.2 83 0.0018 18.0 3.0 31 60-91 1-32 (121)
309 COG4850 Uncharacterized conser 31.1 1.3E+02 0.0029 21.3 4.3 49 45-93 264-314 (373)
310 TIGR03169 Nterm_to_SelD pyridi 31.0 72 0.0016 22.0 3.2 35 60-94 1-35 (364)
311 COG0813 DeoD Purine-nucleoside 30.9 1.2E+02 0.0026 20.2 3.8 31 59-91 56-90 (236)
312 COG2062 SixA Phosphohistidine 30.7 90 0.0019 19.5 3.2 21 46-66 87-109 (163)
313 PRK09065 glutamine amidotransf 30.7 91 0.002 20.5 3.4 34 44-77 72-105 (237)
314 COG0518 GuaA GMP synthase - Gl 30.6 1.2E+02 0.0025 19.5 3.8 36 44-79 63-98 (198)
315 PRK01710 murD UDP-N-acetylmura 30.6 1E+02 0.0023 22.3 4.0 34 48-81 4-37 (458)
316 PLN02752 [acyl-carrier protein 29.3 50 0.0011 22.9 2.1 16 62-77 127-142 (343)
317 PF09673 TrbC_Ftype: Type-F co 29.3 1.2E+02 0.0026 17.5 4.5 42 62-104 2-43 (113)
318 COG1092 Predicted SAM-dependen 29.0 2.3E+02 0.0049 20.5 6.6 46 24-69 290-339 (393)
319 cd03129 GAT1_Peptidase_E_like 28.8 73 0.0016 20.3 2.7 23 53-76 108-130 (210)
320 PF06309 Torsin: Torsin; Inte 28.7 35 0.00077 20.4 1.2 14 1-14 55-68 (127)
321 cd03379 beta_CA_cladeD Carboni 28.6 1E+02 0.0022 18.5 3.2 25 45-69 42-66 (142)
322 PRK06490 glutamine amidotransf 28.6 1.8E+02 0.0039 19.2 7.2 34 44-77 70-103 (239)
323 COG0279 GmhA Phosphoheptose is 28.5 1.6E+02 0.0034 18.7 4.0 70 2-71 44-121 (176)
324 COG2885 OmpA Outer membrane pr 28.4 83 0.0018 19.7 2.9 24 44-67 100-123 (190)
325 PF07521 RMMBL: RNA-metabolisi 28.1 75 0.0016 14.7 3.5 31 25-63 7-37 (43)
326 KOG0780|consensus 27.8 2.5E+02 0.0055 20.7 6.2 19 18-36 176-195 (483)
327 PF03568 Peptidase_C50: Peptid 27.6 88 0.0019 22.2 3.1 44 52-95 302-346 (383)
328 cd03146 GAT1_Peptidase_E Type 27.6 71 0.0015 20.5 2.5 36 59-94 113-155 (212)
329 PRK07877 hypothetical protein; 27.5 2E+02 0.0044 22.7 5.1 39 53-93 102-140 (722)
330 cd01741 GATase1_1 Subgroup of 27.5 1.3E+02 0.0028 18.7 3.6 34 44-77 65-98 (188)
331 PRK11889 flhF flagellar biosyn 27.5 2.6E+02 0.0055 20.7 8.0 79 10-91 304-386 (436)
332 KOG2872|consensus 27.1 2.3E+02 0.0049 19.9 5.4 50 18-67 265-336 (359)
333 PF11009 DUF2847: Protein of u 27.1 1.3E+02 0.0029 17.3 4.3 36 45-80 6-41 (105)
334 PRK07053 glutamine amidotransf 27.1 92 0.002 20.5 3.0 33 45-77 68-100 (234)
335 COG2230 Cfa Cyclopropane fatty 26.5 2.1E+02 0.0045 19.7 4.6 60 24-88 40-102 (283)
336 COG1252 Ndh NADH dehydrogenase 26.3 1.1E+02 0.0025 22.1 3.5 45 59-104 4-48 (405)
337 COG1576 Uncharacterized conser 25.8 1.7E+02 0.0038 18.2 4.8 50 17-71 60-110 (155)
338 PRK14046 malate--CoA ligase su 25.7 54 0.0012 23.4 1.8 31 59-89 119-149 (392)
339 PRK02135 hypothetical protein; 25.4 1.1E+02 0.0024 19.9 3.0 59 5-63 107-176 (201)
340 KOG3179|consensus 25.0 1.6E+02 0.0035 19.4 3.7 35 44-78 77-111 (245)
341 cd07211 Pat_PNPLA8 Patatin-lik 24.8 69 0.0015 21.8 2.2 17 62-78 44-60 (308)
342 PRK11789 N-acetyl-anhydromuran 24.6 1.5E+02 0.0033 18.9 3.5 24 45-68 135-158 (185)
343 KOG2248|consensus 24.3 1.1E+02 0.0023 22.0 3.1 48 46-95 280-328 (380)
344 cd07219 Pat_PNPLA1 Patatin-lik 24.2 1.8E+02 0.0038 21.0 4.1 20 61-80 46-65 (382)
345 cd00382 beta_CA Carbonic anhyd 24.2 1.4E+02 0.003 17.3 3.1 30 44-73 44-73 (119)
346 PF01973 MAF_flag10: Protein o 23.9 1.5E+02 0.0032 18.1 3.4 26 44-69 141-166 (170)
347 PF05049 IIGP: Interferon-indu 23.9 94 0.002 22.3 2.7 13 26-38 87-99 (376)
348 cd06143 PAN2_exo DEDDh 3'-5' e 23.9 1.2E+02 0.0025 19.3 2.8 30 59-90 101-133 (174)
349 cd01014 nicotinamidase_related 23.7 1.8E+02 0.0038 17.5 3.9 47 47-93 88-134 (155)
350 cd03818 GT1_ExpC_like This fam 23.7 1.6E+02 0.0034 20.6 3.9 33 1-35 2-35 (396)
351 PRK15416 lipopolysaccharide co 23.2 1E+02 0.0022 20.0 2.6 27 45-71 138-164 (201)
352 PF02882 THF_DHG_CYH_C: Tetrah 23.1 2E+02 0.0043 17.9 3.7 36 44-79 18-59 (160)
353 KOG1533|consensus 23.1 2.2E+02 0.0048 19.4 4.1 71 19-95 27-107 (290)
354 PF13614 AAA_31: AAA domain; P 23.1 44 0.00096 19.8 0.9 24 12-35 105-128 (157)
355 PF01494 FAD_binding_3: FAD bi 23.0 94 0.002 20.9 2.6 22 60-81 3-24 (356)
356 PF04084 ORC2: Origin recognit 22.9 2.8E+02 0.006 19.4 8.2 71 2-72 57-150 (326)
357 PF02590 SPOUT_MTase: Predicte 22.7 2E+02 0.0043 17.7 6.5 86 17-112 60-146 (155)
358 COG3887 Predicted signaling pr 22.7 3.7E+02 0.0081 20.9 6.1 46 46-94 327-378 (655)
359 PF15566 Imm18: Immunity prote 22.6 99 0.0022 15.4 1.9 26 46-71 8-33 (52)
360 COG4100 Cystathionine beta-lya 22.6 2.9E+02 0.0063 19.6 5.7 62 11-72 152-214 (416)
361 PRK05723 flavodoxin; Provision 22.4 1.8E+02 0.0039 17.7 3.4 7 59-65 85-91 (151)
362 KOG3086|consensus 21.8 2.7E+02 0.0057 19.0 4.2 53 44-96 21-81 (296)
363 cd03378 beta_CA_cladeC Carboni 21.8 1.2E+02 0.0025 18.7 2.5 29 45-73 78-106 (154)
364 PF12242 Eno-Rase_NADH_b: NAD( 21.7 1.5E+02 0.0033 16.1 2.7 22 58-79 39-60 (78)
365 PF03490 Varsurf_PPLC: Variant 21.1 88 0.0019 15.4 1.5 22 44-65 10-31 (51)
366 TIGR02802 Pal_lipo peptidoglyc 21.1 1.6E+02 0.0036 16.2 3.3 24 44-67 17-40 (104)
367 cd07199 Pat17_PNPLA8_PNPLA9_li 20.8 83 0.0018 20.7 1.9 18 62-79 37-54 (258)
368 PRK05282 (alpha)-aspartyl dipe 20.7 1E+02 0.0022 20.4 2.2 20 59-78 112-131 (233)
369 PF00117 GATase: Glutamine ami 20.6 1.5E+02 0.0032 18.4 2.9 34 46-79 58-91 (192)
370 cd03131 GATase1_HTS Type 1 glu 20.5 41 0.0009 21.2 0.4 32 49-80 87-118 (175)
371 PF13478 XdhC_C: XdhC Rossmann 20.5 2.1E+02 0.0045 17.1 3.6 32 2-35 1-32 (136)
372 PF05724 TPMT: Thiopurine S-me 20.2 1.1E+02 0.0024 19.9 2.3 6 33-38 44-49 (218)
373 TIGR00347 bioD dethiobiotin sy 20.2 2.1E+02 0.0046 17.1 6.1 51 18-71 93-143 (166)
No 1
>TIGR02240 PHA_depoly_arom poly(3-hydroxyalkanoate) depolymerase. This family consists of the polyhydroxyalkanoic acid (PHA) depolymerase of Pseudomonas oleovorans, Pseudomonas putida BM01, and related species. This enzyme is part of polyester storage and mobilization system as in many bacteria. However, species containing this enzyme are unusual in their capacity to produce aromatic polyesters when grown on carbon sources such as benzoic acid or phenylacetic acid.
Probab=99.90 E-value=6.1e-23 Score=135.30 Aligned_cols=94 Identities=20% Similarity=0.268 Sum_probs=86.6
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC--ccch--h-hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT--IADR--Y-FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWS 75 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s--~~~~--~-~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~ 75 (115)
|||+||++++...|..+.+.|.++|+|+++|+||+|.| +... + .+++++.++++.++.++++++||||||.+++.
T Consensus 28 lvllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~~~~~~~~~~i~~l~~~~~~LvG~S~GG~va~~ 107 (276)
T TIGR02240 28 LLIFNGIGANLELVFPFIEALDPDLEVIAFDVPGVGGSSTPRHPYRFPGLAKLAARMLDYLDYGQVNAIGVSWGGALAQQ 107 (276)
T ss_pred EEEEeCCCcchHHHHHHHHHhccCceEEEECCCCCCCCCCCCCcCcHHHHHHHHHHHHHHhCcCceEEEEECHHHHHHHH
Confidence 68999999999999999999988999999999999999 3222 3 88999999999999999999999999999999
Q ss_pred HHHhCcccccceEEecCCC
Q psy1324 76 FLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 76 ~~~~~~~~v~~~v~~~~~~ 94 (115)
++.++|+++++++++++..
T Consensus 108 ~a~~~p~~v~~lvl~~~~~ 126 (276)
T TIGR02240 108 FAHDYPERCKKLILAATAA 126 (276)
T ss_pred HHHHCHHHhhheEEeccCC
Confidence 9999999999999999775
No 2
>PLN02824 hydrolase, alpha/beta fold family protein
Probab=99.89 E-value=1.4e-22 Score=134.51 Aligned_cols=94 Identities=19% Similarity=0.289 Sum_probs=86.1
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC--cc------c-hh---hHHHHHHHHHHHhCCCCeeEEEEch
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT--IA------D-RY---FLVDSLKVFLDHLGRNRCILIGRDF 68 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s--~~------~-~~---~~~~~~~~~~~~~~~~~~~lvg~S~ 68 (115)
|||+||++++...|+.+...|++.|+|+++|+||+|.| +. . .| ++++++.+++++++.++++++||||
T Consensus 32 vlllHG~~~~~~~w~~~~~~L~~~~~vi~~DlpG~G~S~~~~~~~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~ 111 (294)
T PLN02824 32 LVLVHGFGGNADHWRKNTPVLAKSHRVYAIDLLGYGYSDKPNPRSAPPNSFYTFETWGEQLNDFCSDVVGDPAFVICNSV 111 (294)
T ss_pred EEEECCCCCChhHHHHHHHHHHhCCeEEEEcCCCCCCCCCCccccccccccCCHHHHHHHHHHHHHHhcCCCeEEEEeCH
Confidence 68999999999999999999998899999999999999 22 1 23 8899999999999999999999999
Q ss_pred hHHHHHHHHHhCcccccceEEecCCC
Q psy1324 69 GGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 69 Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
||.+++.++.++|+++++++++++..
T Consensus 112 Gg~va~~~a~~~p~~v~~lili~~~~ 137 (294)
T PLN02824 112 GGVVGLQAAVDAPELVRGVMLINISL 137 (294)
T ss_pred HHHHHHHHHHhChhheeEEEEECCCc
Confidence 99999999999999999999999754
No 3
>PLN02965 Probable pheophorbidase
Probab=99.89 E-value=1.7e-22 Score=131.93 Aligned_cols=93 Identities=19% Similarity=0.331 Sum_probs=83.8
Q ss_pred CEeecCCCCCHhhHHHHHHhh-hCCceEEEecCCCCCCC--ccc-hh---hHHHHHHHHHHHhCC-CCeeEEEEchhHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEF-SHEYWTVAVDIKTNFRT--IAD-RY---FLVDSLKVFLDHLGR-NRCILIGRDFGGSL 72 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l-~~~~~v~~~d~~g~g~s--~~~-~~---~~~~~~~~~~~~~~~-~~~~lvg~S~Gg~~ 72 (115)
|||+||++.+...|+.++..| .++|+|+++|+||+|.| +.. .+ .+++++.++++.++. ++++++||||||.+
T Consensus 6 vvllHG~~~~~~~w~~~~~~L~~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~dl~~~l~~l~~~~~~~lvGhSmGG~i 85 (255)
T PLN02965 6 FVFVHGASHGAWCWYKLATLLDAAGFKSTCVDLTGAGISLTDSNTVSSSDQYNRPLFALLSDLPPDHKVILVGHSIGGGS 85 (255)
T ss_pred EEEECCCCCCcCcHHHHHHHHhhCCceEEEecCCcCCCCCCCccccCCHHHHHHHHHHHHHhcCCCCCEEEEecCcchHH
Confidence 689999999999999999999 55899999999999999 222 23 788999999999986 59999999999999
Q ss_pred HHHHHHhCcccccceEEecCC
Q psy1324 73 VWSFLDKYPELVVKSIIINVP 93 (115)
Q Consensus 73 a~~~~~~~~~~v~~~v~~~~~ 93 (115)
+..++.++|++|+++|++++.
T Consensus 86 a~~~a~~~p~~v~~lvl~~~~ 106 (255)
T PLN02965 86 VTEALCKFTDKISMAIYVAAA 106 (255)
T ss_pred HHHHHHhCchheeEEEEEccc
Confidence 999999999999999999976
No 4
>PRK03592 haloalkane dehalogenase; Provisional
Probab=99.88 E-value=4.3e-22 Score=132.28 Aligned_cols=93 Identities=24% Similarity=0.431 Sum_probs=85.8
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC--ccchh---hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT--IADRY---FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWS 75 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s--~~~~~---~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~ 75 (115)
|||+||++++...|+.+.+.|.+.++|+++|+||+|.| +...+ .+++++.+++++++.++++++|||+||.+++.
T Consensus 30 vvllHG~~~~~~~w~~~~~~L~~~~~via~D~~G~G~S~~~~~~~~~~~~a~dl~~ll~~l~~~~~~lvGhS~Gg~ia~~ 109 (295)
T PRK03592 30 IVFLHGNPTSSYLWRNIIPHLAGLGRCLAPDLIGMGASDKPDIDYTFADHARYLDAWFDALGLDDVVLVGHDWGSALGFD 109 (295)
T ss_pred EEEECCCCCCHHHHHHHHHHHhhCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCCeEEEEECHHHHHHHH
Confidence 68999999999999999999988889999999999999 33223 88999999999999999999999999999999
Q ss_pred HHHhCcccccceEEecCC
Q psy1324 76 FLDKYPELVVKSIIINVP 93 (115)
Q Consensus 76 ~~~~~~~~v~~~v~~~~~ 93 (115)
++.++|+++++++++++.
T Consensus 110 ~a~~~p~~v~~lil~~~~ 127 (295)
T PRK03592 110 WAARHPDRVRGIAFMEAI 127 (295)
T ss_pred HHHhChhheeEEEEECCC
Confidence 999999999999999974
No 5
>PF12697 Abhydrolase_6: Alpha/beta hydrolase family; PDB: 3LLC_A 3A2N_E 3A2M_A 3A2L_A 3AFI_F 3C5V_A 3C5W_P 3E0X_A 2ZJF_A 3QYJ_A ....
Probab=99.88 E-value=1.1e-21 Score=123.83 Aligned_cols=97 Identities=28% Similarity=0.529 Sum_probs=87.5
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC-c-cc--h--h-hHHHHHHHHHHHhCCCCeeEEEEchhHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT-I-AD--R--Y-FLVDSLKVFLDHLGRNRCILIGRDFGGSLV 73 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s-~-~~--~--~-~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a 73 (115)
|||+||++++...|+.+.+.|+++|+|+++|+||+|.| . .. . + ++++++.+++++++.++++++|||+||.++
T Consensus 1 vv~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~~a 80 (228)
T PF12697_consen 1 VVFLHGFGGSSESWDPLAEALARGYRVIAFDLPGHGRSDPPPDYSPYSIEDYAEDLAELLDALGIKKVILVGHSMGGMIA 80 (228)
T ss_dssp EEEE-STTTTGGGGHHHHHHHHTTSEEEEEECTTSTTSSSHSSGSGGSHHHHHHHHHHHHHHTTTSSEEEEEETHHHHHH
T ss_pred eEEECCCCCCHHHHHHHHHHHhCCCEEEEEecCCccccccccccCCcchhhhhhhhhhcccccccccccccccccccccc
Confidence 69999999999999999999988999999999999999 2 21 2 2 889999999999998999999999999999
Q ss_pred HHHHHhCcccccceEEecCCCChh
Q psy1324 74 WSFLDKYPELVVKSIIINVPHPAV 97 (115)
Q Consensus 74 ~~~~~~~~~~v~~~v~~~~~~~~~ 97 (115)
+.++.++|++++++++++++....
T Consensus 81 ~~~a~~~p~~v~~~vl~~~~~~~~ 104 (228)
T PF12697_consen 81 LRLAARYPDRVKGLVLLSPPPPLP 104 (228)
T ss_dssp HHHHHHSGGGEEEEEEESESSSHH
T ss_pred cccccccccccccceeeccccccc
Confidence 999999999999999999988644
No 6
>PRK00870 haloalkane dehalogenase; Provisional
Probab=99.88 E-value=6.7e-22 Score=131.86 Aligned_cols=93 Identities=19% Similarity=0.364 Sum_probs=84.6
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCCCCC--ccc--hh---hHHHHHHHHHHHhCCCCeeEEEEchhHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFRT--IAD--RY---FLVDSLKVFLDHLGRNRCILIGRDFGGSL 72 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s--~~~--~~---~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~ 72 (115)
|||+||++.+...|..+.+.|.+ +|+|+++|+||+|.| +.. .+ ++++++.+++++++.++++++||||||.+
T Consensus 49 lvliHG~~~~~~~w~~~~~~L~~~gy~vi~~Dl~G~G~S~~~~~~~~~~~~~~a~~l~~~l~~l~~~~v~lvGhS~Gg~i 128 (302)
T PRK00870 49 VLLLHGEPSWSYLYRKMIPILAAAGHRVIAPDLIGFGRSDKPTRREDYTYARHVEWMRSWFEQLDLTDVTLVCQDWGGLI 128 (302)
T ss_pred EEEECCCCCchhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEEChHHHH
Confidence 68999999999999999999975 899999999999999 221 23 88999999999999999999999999999
Q ss_pred HHHHHHhCcccccceEEecCC
Q psy1324 73 VWSFLDKYPELVVKSIIINVP 93 (115)
Q Consensus 73 a~~~~~~~~~~v~~~v~~~~~ 93 (115)
+..++.++|+++.+++++++.
T Consensus 129 a~~~a~~~p~~v~~lvl~~~~ 149 (302)
T PRK00870 129 GLRLAAEHPDRFARLVVANTG 149 (302)
T ss_pred HHHHHHhChhheeEEEEeCCC
Confidence 999999999999999999864
No 7
>PRK10673 acyl-CoA esterase; Provisional
Probab=99.87 E-value=1.6e-21 Score=126.65 Aligned_cols=94 Identities=19% Similarity=0.284 Sum_probs=85.9
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC-ccch--h-hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT-IADR--Y-FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSF 76 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s-~~~~--~-~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~ 76 (115)
||++||++++...|..+...+.++|+|+++|+||+|.| +... + ++++++.++++.++.++++++||||||.+++.+
T Consensus 19 iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~s~~~~~~~~~~~~~d~~~~l~~l~~~~~~lvGhS~Gg~va~~~ 98 (255)
T PRK10673 19 IVLVHGLFGSLDNLGVLARDLVNDHDIIQVDMRNHGLSPRDPVMNYPAMAQDLLDTLDALQIEKATFIGHSMGGKAVMAL 98 (255)
T ss_pred EEEECCCCCchhHHHHHHHHHhhCCeEEEECCCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCceEEEEECHHHHHHHHH
Confidence 68999999999999999999998999999999999999 3223 3 889999999999998999999999999999999
Q ss_pred HHhCcccccceEEecCCC
Q psy1324 77 LDKYPELVVKSIIINVPH 94 (115)
Q Consensus 77 ~~~~~~~v~~~v~~~~~~ 94 (115)
+.++|++|++++++++.+
T Consensus 99 a~~~~~~v~~lvli~~~~ 116 (255)
T PRK10673 99 TALAPDRIDKLVAIDIAP 116 (255)
T ss_pred HHhCHhhcceEEEEecCC
Confidence 999999999999998654
No 8
>PRK11126 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase; Provisional
Probab=99.87 E-value=2.4e-21 Score=125.12 Aligned_cols=93 Identities=17% Similarity=0.206 Sum_probs=82.9
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC--ccch-h-hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT--IADR-Y-FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSF 76 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s--~~~~-~-~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~ 76 (115)
|||+||++++...|+++.+.++ +|+|+++|+||+|.| +... + .+++++.+++++++.++++++||||||.+++.+
T Consensus 5 vvllHG~~~~~~~w~~~~~~l~-~~~vi~~D~~G~G~S~~~~~~~~~~~~~~l~~~l~~~~~~~~~lvG~S~Gg~va~~~ 83 (242)
T PRK11126 5 LVFLHGLLGSGQDWQPVGEALP-DYPRLYIDLPGHGGSAAISVDGFADVSRLLSQTLQSYNILPYWLVGYSLGGRIAMYY 83 (242)
T ss_pred EEEECCCCCChHHHHHHHHHcC-CCCEEEecCCCCCCCCCccccCHHHHHHHHHHHHHHcCCCCeEEEEECHHHHHHHHH
Confidence 6899999999999999999885 799999999999999 2222 4 889999999999999999999999999999999
Q ss_pred HHhCcc-cccceEEecCCC
Q psy1324 77 LDKYPE-LVVKSIIINVPH 94 (115)
Q Consensus 77 ~~~~~~-~v~~~v~~~~~~ 94 (115)
+.++|+ ++++++++++.+
T Consensus 84 a~~~~~~~v~~lvl~~~~~ 102 (242)
T PRK11126 84 ACQGLAGGLCGLIVEGGNP 102 (242)
T ss_pred HHhCCcccccEEEEeCCCC
Confidence 999965 499999887654
No 9
>PLN02679 hydrolase, alpha/beta fold family protein
Probab=99.86 E-value=4.2e-21 Score=131.07 Aligned_cols=94 Identities=20% Similarity=0.342 Sum_probs=84.5
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC--ccc-hh---hHHHHHHHHHHHhCCCCeeEEEEchhHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT--IAD-RY---FLVDSLKVFLDHLGRNRCILIGRDFGGSLVW 74 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s--~~~-~~---~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~ 74 (115)
|||+||++.+...|.+++..|.++|+|+++|+||+|.| +.+ .| .+++++.+++++++.++++++||||||.+++
T Consensus 91 lvllHG~~~~~~~w~~~~~~L~~~~~via~Dl~G~G~S~~~~~~~~~~~~~a~~l~~~l~~l~~~~~~lvGhS~Gg~ia~ 170 (360)
T PLN02679 91 VLLVHGFGASIPHWRRNIGVLAKNYTVYAIDLLGFGASDKPPGFSYTMETWAELILDFLEEVVQKPTVLIGNSVGSLACV 170 (360)
T ss_pred EEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCCCccccHHHHHHHHHHHHHHhcCCCeEEEEECHHHHHHH
Confidence 68999999999999999999988999999999999999 322 23 8889999999999999999999999999999
Q ss_pred HHHHh-CcccccceEEecCCC
Q psy1324 75 SFLDK-YPELVVKSIIINVPH 94 (115)
Q Consensus 75 ~~~~~-~~~~v~~~v~~~~~~ 94 (115)
.++.. +|++|+++|++++..
T Consensus 171 ~~a~~~~P~rV~~LVLi~~~~ 191 (360)
T PLN02679 171 IAASESTRDLVRGLVLLNCAG 191 (360)
T ss_pred HHHHhcChhhcCEEEEECCcc
Confidence 98874 799999999999754
No 10
>KOG4409|consensus
Probab=99.86 E-value=1.8e-21 Score=129.47 Aligned_cols=95 Identities=23% Similarity=0.414 Sum_probs=85.7
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCCccchh---------hHHHHHHHHHHHhCCCCeeEEEEchhHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRTIADRY---------FLVDSLKVFLDHLGRNRCILIGRDFGGS 71 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~---------~~~~~~~~~~~~~~~~~~~lvg~S~Gg~ 71 (115)
+|++||++.+.-.|-..++.|++..+++++|++|+|.|....| .+++.+.++....+.++.+|+|||+||+
T Consensus 93 lVliHGyGAg~g~f~~Nf~~La~~~~vyaiDllG~G~SSRP~F~~d~~~~e~~fvesiE~WR~~~~L~KmilvGHSfGGY 172 (365)
T KOG4409|consen 93 LVLIHGYGAGLGLFFRNFDDLAKIRNVYAIDLLGFGRSSRPKFSIDPTTAEKEFVESIEQWRKKMGLEKMILVGHSFGGY 172 (365)
T ss_pred EEEEeccchhHHHHHHhhhhhhhcCceEEecccCCCCCCCCCCCCCcccchHHHHHHHHHHHHHcCCcceeEeeccchHH
Confidence 5899999999999999999999999999999999999911111 7788888999999999999999999999
Q ss_pred HHHHHHHhCcccccceEEecCCCC
Q psy1324 72 LVWSFLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 72 ~a~~~~~~~~~~v~~~v~~~~~~~ 95 (115)
++..||.+||++|+++|+++|...
T Consensus 173 Laa~YAlKyPerV~kLiLvsP~Gf 196 (365)
T KOG4409|consen 173 LAAKYALKYPERVEKLILVSPWGF 196 (365)
T ss_pred HHHHHHHhChHhhceEEEeccccc
Confidence 999999999999999999997653
No 11
>KOG4178|consensus
Probab=99.86 E-value=1.8e-21 Score=128.70 Aligned_cols=98 Identities=38% Similarity=0.741 Sum_probs=90.3
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCCCCC--ccch--h---hHHHHHHHHHHHhCCCCeeEEEEchhHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFRT--IADR--Y---FLVDSLKVFLDHLGRNRCILIGRDFGGSL 72 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s--~~~~--~---~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~ 72 (115)
|+++||++..++.|+.....|+. +|+|+++|+||+|.| |... | .++.++..++++++.++++++||+||+.+
T Consensus 47 illlHGfPe~wyswr~q~~~la~~~~rviA~DlrGyG~Sd~P~~~~~Yt~~~l~~di~~lld~Lg~~k~~lvgHDwGaiv 126 (322)
T KOG4178|consen 47 VLLLHGFPESWYSWRHQIPGLASRGYRVIAPDLRGYGFSDAPPHISEYTIDELVGDIVALLDHLGLKKAFLVGHDWGAIV 126 (322)
T ss_pred EEEEccCCccchhhhhhhhhhhhcceEEEecCCCCCCCCCCCCCcceeeHHHHHHHHHHHHHHhccceeEEEeccchhHH
Confidence 58999999999999999999987 799999999999999 4442 5 89999999999999999999999999999
Q ss_pred HHHHHHhCcccccceEEecCCCChhH
Q psy1324 73 VWSFLDKYPELVVKSIIINVPHPAVF 98 (115)
Q Consensus 73 a~~~~~~~~~~v~~~v~~~~~~~~~~ 98 (115)
++.++..+|+++++++.++.+.....
T Consensus 127 aw~la~~~Perv~~lv~~nv~~~~p~ 152 (322)
T KOG4178|consen 127 AWRLALFYPERVDGLVTLNVPFPNPK 152 (322)
T ss_pred HHHHHHhChhhcceEEEecCCCCCcc
Confidence 99999999999999999999887333
No 12
>PRK10349 carboxylesterase BioH; Provisional
Probab=99.86 E-value=5.7e-21 Score=124.57 Aligned_cols=93 Identities=19% Similarity=0.266 Sum_probs=76.8
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCCc-cchhhHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHh
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRTI-ADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDK 79 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~-~~~~~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~ 79 (115)
|||+||++++...|+.+.+.|.+.|+|+++|+||+|.|. ...+...+ +.+.+.++..++++++||||||.+++.++.+
T Consensus 16 ivllHG~~~~~~~w~~~~~~L~~~~~vi~~Dl~G~G~S~~~~~~~~~~-~~~~l~~~~~~~~~lvGhS~Gg~ia~~~a~~ 94 (256)
T PRK10349 16 LVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLAD-MAEAVLQQAPDKAIWLGWSLGGLVASQIALT 94 (256)
T ss_pred EEEECCCCCChhHHHHHHHHHhcCCEEEEecCCCCCCCCCCCCCCHHH-HHHHHHhcCCCCeEEEEECHHHHHHHHHHHh
Confidence 689999999999999999999989999999999999982 22222222 2222334567899999999999999999999
Q ss_pred CcccccceEEecCCC
Q psy1324 80 YPELVVKSIIINVPH 94 (115)
Q Consensus 80 ~~~~v~~~v~~~~~~ 94 (115)
+|+++++++++++.+
T Consensus 95 ~p~~v~~lili~~~~ 109 (256)
T PRK10349 95 HPERVQALVTVASSP 109 (256)
T ss_pred ChHhhheEEEecCcc
Confidence 999999999998753
No 13
>PLN02578 hydrolase
Probab=99.85 E-value=1.1e-20 Score=128.73 Aligned_cols=94 Identities=24% Similarity=0.452 Sum_probs=85.0
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC--ccchh---hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT--IADRY---FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWS 75 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s--~~~~~---~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~ 75 (115)
||++||++++...|..+...|.++|+|+++|+||+|.| +...| .+.+++.++++.+..++++++|||+||.+++.
T Consensus 89 vvliHG~~~~~~~w~~~~~~l~~~~~v~~~D~~G~G~S~~~~~~~~~~~~a~~l~~~i~~~~~~~~~lvG~S~Gg~ia~~ 168 (354)
T PLN02578 89 IVLIHGFGASAFHWRYNIPELAKKYKVYALDLLGFGWSDKALIEYDAMVWRDQVADFVKEVVKEPAVLVGNSLGGFTALS 168 (354)
T ss_pred EEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCcccccCHHHHHHHHHHHHHHhccCCeEEEEECHHHHHHHH
Confidence 58999999999999999999988999999999999999 32224 77889999999998899999999999999999
Q ss_pred HHHhCcccccceEEecCCC
Q psy1324 76 FLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 76 ~~~~~~~~v~~~v~~~~~~ 94 (115)
++.++|+++++++++++..
T Consensus 169 ~A~~~p~~v~~lvLv~~~~ 187 (354)
T PLN02578 169 TAVGYPELVAGVALLNSAG 187 (354)
T ss_pred HHHhChHhcceEEEECCCc
Confidence 9999999999999998653
No 14
>PRK03204 haloalkane dehalogenase; Provisional
Probab=99.85 E-value=1.7e-20 Score=124.52 Aligned_cols=94 Identities=21% Similarity=0.344 Sum_probs=84.6
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC--ccc-hh---hHHHHHHHHHHHhCCCCeeEEEEchhHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT--IAD-RY---FLVDSLKVFLDHLGRNRCILIGRDFGGSLVW 74 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s--~~~-~~---~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~ 74 (115)
|||+||++.+...|+.+...|.++|+|+++|+||+|.| +.+ .+ .+++++.+++++++.++++++||||||.+++
T Consensus 37 iv~lHG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~va~ 116 (286)
T PRK03204 37 ILLCHGNPTWSFLYRDIIVALRDRFRCVAPDYLGFGLSERPSGFGYQIDEHARVIGEFVDHLGLDRYLSMGQDWGGPISM 116 (286)
T ss_pred EEEECCCCccHHHHHHHHHHHhCCcEEEEECCCCCCCCCCCCccccCHHHHHHHHHHHHHHhCCCCEEEEEECccHHHHH
Confidence 68999999999999999999988999999999999998 332 23 7888899999999999999999999999999
Q ss_pred HHHHhCcccccceEEecCCC
Q psy1324 75 SFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 75 ~~~~~~~~~v~~~v~~~~~~ 94 (115)
.++..+|++++++|++++..
T Consensus 117 ~~a~~~p~~v~~lvl~~~~~ 136 (286)
T PRK03204 117 AVAVERADRVRGVVLGNTWF 136 (286)
T ss_pred HHHHhChhheeEEEEECccc
Confidence 99999999999999987653
No 15
>TIGR03611 RutD pyrimidine utilization protein D. This protein is observed in operons extremely similar to that characterized in E. coli K-12 responsible for the import and catabolism of pyrimidines, primarily uracil. This protein is a member of the hydrolase, alpha/beta fold family defined by pfam00067.
Probab=99.84 E-value=1.6e-20 Score=121.23 Aligned_cols=94 Identities=22% Similarity=0.403 Sum_probs=84.7
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC--ccch-h---hHHHHHHHHHHHhCCCCeeEEEEchhHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT--IADR-Y---FLVDSLKVFLDHLGRNRCILIGRDFGGSLVW 74 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s--~~~~-~---~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~ 74 (115)
||++||++++...|..+.+.+.++|+|+++|+||+|.| +... + ++++++.++++.++.++++++||||||.++.
T Consensus 16 iv~lhG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~~~~l~G~S~Gg~~a~ 95 (257)
T TIGR03611 16 VVLSSGLGGSGSYWAPQLDVLTQRFHVVTYDHRGTGRSPGELPPGYSIAHMADDVLQLLDALNIERFHFVGHALGGLIGL 95 (257)
T ss_pred EEEEcCCCcchhHHHHHHHHHHhccEEEEEcCCCCCCCCCCCcccCCHHHHHHHHHHHHHHhCCCcEEEEEechhHHHHH
Confidence 68999999999999999998888999999999999999 2222 3 8889999999999989999999999999999
Q ss_pred HHHHhCcccccceEEecCCC
Q psy1324 75 SFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 75 ~~~~~~~~~v~~~v~~~~~~ 94 (115)
.++.++|+++++++++++..
T Consensus 96 ~~a~~~~~~v~~~i~~~~~~ 115 (257)
T TIGR03611 96 QLALRYPERLLSLVLINAWS 115 (257)
T ss_pred HHHHHChHHhHHheeecCCC
Confidence 99999999999999998754
No 16
>PLN03084 alpha/beta hydrolase fold protein; Provisional
Probab=99.84 E-value=4.6e-20 Score=126.71 Aligned_cols=95 Identities=24% Similarity=0.413 Sum_probs=87.1
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC--ccc----hh---hHHHHHHHHHHHhCCCCeeEEEEchhHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT--IAD----RY---FLVDSLKVFLDHLGRNRCILIGRDFGGS 71 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s--~~~----~~---~~~~~~~~~~~~~~~~~~~lvg~S~Gg~ 71 (115)
|||+||++.+...|+++...|+++|+|+++|+||+|.| +.. .+ .+++++.+++++++.++++++|||+||.
T Consensus 130 ivllHG~~~~~~~w~~~~~~L~~~~~Via~DlpG~G~S~~p~~~~~~~ys~~~~a~~l~~~i~~l~~~~~~LvG~s~GG~ 209 (383)
T PLN03084 130 VLLIHGFPSQAYSYRKVLPVLSKNYHAIAFDWLGFGFSDKPQPGYGFNYTLDEYVSSLESLIDELKSDKVSLVVQGYFSP 209 (383)
T ss_pred EEEECCCCCCHHHHHHHHHHHhcCCEEEEECCCCCCCCCCCcccccccCCHHHHHHHHHHHHHHhCCCCceEEEECHHHH
Confidence 68999999999999999999988999999999999998 321 23 8899999999999999999999999999
Q ss_pred HHHHHHHhCcccccceEEecCCCC
Q psy1324 72 LVWSFLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 72 ~a~~~~~~~~~~v~~~v~~~~~~~ 95 (115)
+++.++.++|+++.++|+++++..
T Consensus 210 ia~~~a~~~P~~v~~lILi~~~~~ 233 (383)
T PLN03084 210 PVVKYASAHPDKIKKLILLNPPLT 233 (383)
T ss_pred HHHHHHHhChHhhcEEEEECCCCc
Confidence 999999999999999999998753
No 17
>TIGR03056 bchO_mg_che_rel putative magnesium chelatase accessory protein. Members of this family belong to the alpha/beta fold family hydrolases (PFAM model pfam00561). Members are found in bacterial genomes if and only if they encoded for anoxygenic photosynthetic systems similar to that of Rhodobacter capsulatus and other alpha-Proteobacteria. Members often are encoded in the same operon as subunits of the protoporphyrin IX magnesium chelatase, and were once designated BchO. No literature supports a role as an actual subunit of magnesium chelatase, but an accessory role is possible, as suggested by placement by its probable hydrolase activity.
Probab=99.83 E-value=6.2e-20 Score=120.17 Aligned_cols=94 Identities=21% Similarity=0.239 Sum_probs=84.9
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC--ccc-h--h-hHHHHHHHHHHHhCCCCeeEEEEchhHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT--IAD-R--Y-FLVDSLKVFLDHLGRNRCILIGRDFGGSLVW 74 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s--~~~-~--~-~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~ 74 (115)
||++||++++...|+.+.+.++++|+|+++|+||+|.| +.. . + .+++++.+++++++.++++++||||||.+++
T Consensus 31 vv~~hG~~~~~~~~~~~~~~l~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~i~~~~~~~~~lvG~S~Gg~~a~ 110 (278)
T TIGR03056 31 LLLLHGTGASTHSWRDLMPPLARSFRVVAPDLPGHGFTRAPFRFRFTLPSMAEDLSALCAAEGLSPDGVIGHSAGAAIAL 110 (278)
T ss_pred EEEEcCCCCCHHHHHHHHHHHhhCcEEEeecCCCCCCCCCccccCCCHHHHHHHHHHHHHHcCCCCceEEEECccHHHHH
Confidence 68999999999999999999988999999999999998 333 2 3 8899999999999888999999999999999
Q ss_pred HHHHhCcccccceEEecCCC
Q psy1324 75 SFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 75 ~~~~~~~~~v~~~v~~~~~~ 94 (115)
.++.++|+++++++++++..
T Consensus 111 ~~a~~~p~~v~~~v~~~~~~ 130 (278)
T TIGR03056 111 RLALDGPVTPRMVVGINAAL 130 (278)
T ss_pred HHHHhCCcccceEEEEcCcc
Confidence 99999999999999988654
No 18
>TIGR02427 protocat_pcaD 3-oxoadipate enol-lactonase. Members of this family are 3-oxoadipate enol-lactonase. Note that the substrate is known as 3-oxoadipate enol-lactone, 2-oxo-2,3-dihydrofuran-5-acetate, 4,5-Dihydro-5-oxofuran-2-acetate, and 5-oxo-4,5-dihydrofuran-2-acetate. The enzyme the catalyzes the fourth step in the protocatechuate degradation to beta-ketoadipate and then to succinyl-CoA and acetyl-CoA. 4-hydroxybenzoate, 3-hydroxybenzoate, and vanillate all can be converted in one step to protocatechuate. This enzyme also acts in catechol degradation. In genomes that catabolize both catechol and protocatechuate, two forms of this enzyme may be found. All members of the seed alignment for this model were chosen from within protocatechuate degradation operons of at least three genes of the pathway, from genomes with the complete pathway through beta-ketoadipate.
Probab=99.83 E-value=4.1e-20 Score=118.40 Aligned_cols=94 Identities=18% Similarity=0.392 Sum_probs=84.5
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC--ccch--h-hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT--IADR--Y-FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWS 75 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s--~~~~--~-~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~ 75 (115)
+|++||++.+...|+++.+.+.++|+|+++|+||+|.| +... + ++++++.+++++++.++++++|||+||.+++.
T Consensus 16 li~~hg~~~~~~~~~~~~~~l~~~~~v~~~d~~G~G~s~~~~~~~~~~~~~~~~~~~i~~~~~~~v~liG~S~Gg~~a~~ 95 (251)
T TIGR02427 16 LVFINSLGTDLRMWDPVLPALTPDFRVLRYDKRGHGLSDAPEGPYSIEDLADDVLALLDHLGIERAVFCGLSLGGLIAQG 95 (251)
T ss_pred EEEEcCcccchhhHHHHHHHhhcccEEEEecCCCCCCCCCCCCCCCHHHHHHHHHHHHHHhCCCceEEEEeCchHHHHHH
Confidence 58999999999999999999988999999999999998 2222 3 88899999999998899999999999999999
Q ss_pred HHHhCcccccceEEecCCC
Q psy1324 76 FLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 76 ~~~~~~~~v~~~v~~~~~~ 94 (115)
++.++|++++++++++++.
T Consensus 96 ~a~~~p~~v~~li~~~~~~ 114 (251)
T TIGR02427 96 LAARRPDRVRALVLSNTAA 114 (251)
T ss_pred HHHHCHHHhHHHhhccCcc
Confidence 9999999999999988654
No 19
>TIGR03343 biphenyl_bphD 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase. Members of this family are 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase, or HOPD hydrolase, the BphD protein of biphenyl degradation. BphD acts on the product of ring meta-cleavage by BphC. Many species carrying bphC and bphD are capable of degrading polychlorinated biphenyls as well as biphenyl itself.
Probab=99.82 E-value=1.1e-19 Score=119.66 Aligned_cols=93 Identities=22% Similarity=0.365 Sum_probs=78.6
Q ss_pred CEeecCCCCCHhhHHHH---HHhh-hCCceEEEecCCCCCCC-cc--ch-h--hHHHHHHHHHHHhCCCCeeEEEEchhH
Q psy1324 1 MLFLHGFPESWYIWKHQ---MSEF-SHEYWTVAVDIKTNFRT-IA--DR-Y--FLVDSLKVFLDHLGRNRCILIGRDFGG 70 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~---~~~l-~~~~~v~~~d~~g~g~s-~~--~~-~--~~~~~~~~~~~~~~~~~~~lvg~S~Gg 70 (115)
||++||++.+...|..+ +..+ .++|+|+++|+||+|.| +. +. . ..++++.++++.++.++++++||||||
T Consensus 33 ivllHG~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~l~~~l~~l~~~~~~lvG~S~Gg 112 (282)
T TIGR03343 33 VIMLHGGGPGAGGWSNYYRNIGPFVDAGYRVILKDSPGFNKSDAVVMDEQRGLVNARAVKGLMDALDIEKAHLVGNSMGG 112 (282)
T ss_pred EEEECCCCCchhhHHHHHHHHHHHHhCCCEEEEECCCCCCCCCCCcCcccccchhHHHHHHHHHHcCCCCeeEEEECchH
Confidence 68999999888777643 3344 45899999999999999 22 11 1 567889999999999999999999999
Q ss_pred HHHHHHHHhCcccccceEEecCC
Q psy1324 71 SLVWSFLDKYPELVVKSIIINVP 93 (115)
Q Consensus 71 ~~a~~~~~~~~~~v~~~v~~~~~ 93 (115)
.+++.++.++|+++++++++++.
T Consensus 113 ~ia~~~a~~~p~~v~~lvl~~~~ 135 (282)
T TIGR03343 113 ATALNFALEYPDRIGKLILMGPG 135 (282)
T ss_pred HHHHHHHHhChHhhceEEEECCC
Confidence 99999999999999999999875
No 20
>PLN02211 methyl indole-3-acetate methyltransferase
Probab=99.82 E-value=9.4e-20 Score=120.38 Aligned_cols=94 Identities=18% Similarity=0.364 Sum_probs=82.3
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCCCCC-cc--ch--h-hHHHHHHHHHHHhC-CCCeeEEEEchhHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFRT-IA--DR--Y-FLVDSLKVFLDHLG-RNRCILIGRDFGGSL 72 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s-~~--~~--~-~~~~~~~~~~~~~~-~~~~~lvg~S~Gg~~ 72 (115)
|||+||++.+...|+++...|.+ +|+|+++|+||+|.+ +. .. + ++++++.++++++. .++++++||||||.+
T Consensus 21 vvliHG~~~~~~~w~~~~~~L~~~g~~vi~~dl~g~G~s~~~~~~~~~~~~~~~~l~~~i~~l~~~~~v~lvGhS~GG~v 100 (273)
T PLN02211 21 FVLIHGISGGSWCWYKIRCLMENSGYKVTCIDLKSAGIDQSDADSVTTFDEYNKPLIDFLSSLPENEKVILVGHSAGGLS 100 (273)
T ss_pred EEEECCCCCCcCcHHHHHHHHHhCCCEEEEecccCCCCCCCCcccCCCHHHHHHHHHHHHHhcCCCCCEEEEEECchHHH
Confidence 68999999999999999999975 999999999999987 21 11 3 77888889998875 489999999999999
Q ss_pred HHHHHHhCcccccceEEecCCC
Q psy1324 73 VWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 73 a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
+..++.++|++++++|++++..
T Consensus 101 ~~~~a~~~p~~v~~lv~~~~~~ 122 (273)
T PLN02211 101 VTQAIHRFPKKICLAVYVAATM 122 (273)
T ss_pred HHHHHHhChhheeEEEEecccc
Confidence 9999999999999999997754
No 21
>PLN03087 BODYGUARD 1 domain containing hydrolase; Provisional
Probab=99.82 E-value=1.3e-19 Score=127.18 Aligned_cols=94 Identities=26% Similarity=0.398 Sum_probs=80.2
Q ss_pred CEeecCCCCCHhhHHH-HHHhhh----CCceEEEecCCCCCCC--ccch-h---hHHHHHH-HHHHHhCCCCeeEEEEch
Q psy1324 1 MLFLHGFPESWYIWKH-QMSEFS----HEYWTVAVDIKTNFRT--IADR-Y---FLVDSLK-VFLDHLGRNRCILIGRDF 68 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~-~~~~l~----~~~~v~~~d~~g~g~s--~~~~-~---~~~~~~~-~~~~~~~~~~~~lvg~S~ 68 (115)
|||+||++++...|.. +...+. .+|+|+++|+||+|.| +.+. | ++++++. .+++.++.++++++||||
T Consensus 204 VVLlHG~~~s~~~W~~~~~~~L~~~~~~~yrVia~Dl~G~G~S~~p~~~~ytl~~~a~~l~~~ll~~lg~~k~~LVGhSm 283 (481)
T PLN03087 204 VLFIHGFISSSAFWTETLFPNFSDAAKSTYRLFAVDLLGFGRSPKPADSLYTLREHLEMIERSVLERYKVKSFHIVAHSL 283 (481)
T ss_pred EEEECCCCccHHHHHHHHHHHHHHHhhCCCEEEEECCCCCCCCcCCCCCcCCHHHHHHHHHHHHHHHcCCCCEEEEEECH
Confidence 6899999999999985 335543 5899999999999999 3222 3 6777774 788999999999999999
Q ss_pred hHHHHHHHHHhCcccccceEEecCCC
Q psy1324 69 GGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 69 Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
||.+++.++.++|++++++++++++.
T Consensus 284 GG~iAl~~A~~~Pe~V~~LVLi~~~~ 309 (481)
T PLN03087 284 GCILALALAVKHPGAVKSLTLLAPPY 309 (481)
T ss_pred HHHHHHHHHHhChHhccEEEEECCCc
Confidence 99999999999999999999998764
No 22
>TIGR03695 menH_SHCHC 2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate synthase. This protein catalyzes the formation of SHCHC, or (1 R,6 R)-2-succinyl-6-hydroxy-2,4-cyclohexadiene-1-carboxylate, by elmination of pyruvate from 2-succinyl-5-enolpyruvyl-6-hydroxy-3-cyclohexene-1-carboxylate (SEPHCHC). Note that SHCHC synthase activity previously was attributed to MenD, which in fact is SEPHCHC synthase.
Probab=99.82 E-value=1.7e-19 Score=115.26 Aligned_cols=94 Identities=26% Similarity=0.454 Sum_probs=82.6
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC--ccc--h--h-hHHHH-HHHHHHHhCCCCeeEEEEchhHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT--IAD--R--Y-FLVDS-LKVFLDHLGRNRCILIGRDFGGSL 72 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s--~~~--~--~-~~~~~-~~~~~~~~~~~~~~lvg~S~Gg~~ 72 (115)
||++||++++...|+++.+.|+++|+|+++|+||+|.| +.. . + +.+++ +..++++++.++++++|||+||.+
T Consensus 4 vv~~hG~~~~~~~~~~~~~~L~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~i 83 (251)
T TIGR03695 4 LVFLHGFLGSGADWQALIELLGPHFRCLAIDLPGHGSSQSPDEIERYDFEEAAQDILATLLDQLGIEPFFLVGYSMGGRI 83 (251)
T ss_pred EEEEcCCCCchhhHHHHHHHhcccCeEEEEcCCCCCCCCCCCccChhhHHHHHHHHHHHHHHHcCCCeEEEEEeccHHHH
Confidence 68999999999999999999988999999999999998 222 1 2 66667 667778888889999999999999
Q ss_pred HHHHHHhCcccccceEEecCCC
Q psy1324 73 VWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 73 a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
++.++.++|+.+++++++++.+
T Consensus 84 a~~~a~~~~~~v~~lil~~~~~ 105 (251)
T TIGR03695 84 ALYYALQYPERVQGLILESGSP 105 (251)
T ss_pred HHHHHHhCchheeeeEEecCCC
Confidence 9999999999999999998754
No 23
>PRK06489 hypothetical protein; Provisional
Probab=99.82 E-value=1.4e-19 Score=123.59 Aligned_cols=94 Identities=22% Similarity=0.384 Sum_probs=76.5
Q ss_pred CEeecCCCCCHhhHH--HHHHhh--------hCCceEEEecCCCCCCC--ccc-------hh---hHHHHHHHH-HHHhC
Q psy1324 1 MLFLHGFPESWYIWK--HQMSEF--------SHEYWTVAVDIKTNFRT--IAD-------RY---FLVDSLKVF-LDHLG 57 (115)
Q Consensus 1 vl~~hG~~~~~~~~~--~~~~~l--------~~~~~v~~~d~~g~g~s--~~~-------~~---~~~~~~~~~-~~~~~ 57 (115)
|||+||++++...|. .+.+.+ .++|+|+++|+||||.| +.+ .| ++++++.++ +++++
T Consensus 72 lvllHG~~~~~~~~~~~~~~~~l~~~~~~l~~~~~~Via~Dl~GhG~S~~p~~~~~~~~~~~~~~~~a~~~~~~l~~~lg 151 (360)
T PRK06489 72 VLVLHGTGGSGKSFLSPTFAGELFGPGQPLDASKYFIILPDGIGHGKSSKPSDGLRAAFPRYDYDDMVEAQYRLVTEGLG 151 (360)
T ss_pred EEEeCCCCCchhhhccchhHHHhcCCCCcccccCCEEEEeCCCCCCCCCCCCcCCCCCCCcccHHHHHHHHHHHHHHhcC
Confidence 689999999988875 444433 56899999999999998 322 23 666666664 47788
Q ss_pred CCCee-EEEEchhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 58 RNRCI-LIGRDFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 58 ~~~~~-lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
.++++ ++||||||++++.++.++|++++++|++++.+
T Consensus 152 i~~~~~lvG~SmGG~vAl~~A~~~P~~V~~LVLi~s~~ 189 (360)
T PRK06489 152 VKHLRLILGTSMGGMHAWMWGEKYPDFMDALMPMASQP 189 (360)
T ss_pred CCceeEEEEECHHHHHHHHHHHhCchhhheeeeeccCc
Confidence 88885 89999999999999999999999999998753
No 24
>PLN02385 hydrolase; alpha/beta fold family protein
Probab=99.81 E-value=2e-19 Score=122.28 Aligned_cols=94 Identities=17% Similarity=0.258 Sum_probs=78.7
Q ss_pred CEeecCCCCCHhh-HHHHHHhhhC-CceEEEecCCCCCCC--ccc---hh-hHHHHHHHHHHHhCC------CCeeEEEE
Q psy1324 1 MLFLHGFPESWYI-WKHQMSEFSH-EYWTVAVDIKTNFRT--IAD---RY-FLVDSLKVFLDHLGR------NRCILIGR 66 (115)
Q Consensus 1 vl~~hG~~~~~~~-~~~~~~~l~~-~~~v~~~d~~g~g~s--~~~---~~-~~~~~~~~~~~~~~~------~~~~lvg~ 66 (115)
|||+||++.+... |+.+...|.+ +|.|+++|+||+|.| +.. .+ .+++++.++++.+.. .+++++||
T Consensus 90 iv~lHG~~~~~~~~~~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~dv~~~l~~l~~~~~~~~~~~~LvGh 169 (349)
T PLN02385 90 VCFCHGYGDTCTFFFEGIARKIASSGYGVFAMDYPGFGLSEGLHGYIPSFDDLVDDVIEHYSKIKGNPEFRGLPSFLFGQ 169 (349)
T ss_pred EEEECCCCCccchHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCCCcCCHHHHHHHHHHHHHHHHhccccCCCCEEEEEe
Confidence 6899999988654 6888888875 999999999999999 222 13 678888888877643 37999999
Q ss_pred chhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 67 DFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 67 S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
||||.+++.++.++|++++++|++++..
T Consensus 170 SmGG~val~~a~~~p~~v~glVLi~p~~ 197 (349)
T PLN02385 170 SMGGAVALKVHLKQPNAWDGAILVAPMC 197 (349)
T ss_pred ccchHHHHHHHHhCcchhhheeEecccc
Confidence 9999999999999999999999999753
No 25
>PHA02857 monoglyceride lipase; Provisional
Probab=99.81 E-value=3e-19 Score=117.60 Aligned_cols=94 Identities=15% Similarity=0.157 Sum_probs=77.4
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCCCCC-ccc----hh-hHHHHHHHHHHHh----CCCCeeEEEEchh
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFRT-IAD----RY-FLVDSLKVFLDHL----GRNRCILIGRDFG 69 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s-~~~----~~-~~~~~~~~~~~~~----~~~~~~lvg~S~G 69 (115)
|+++||++.+...|+.+.+.|.+ +|.|+++|+||+|.| +.. .+ .+++++.+.++.+ ..++++++|||||
T Consensus 28 v~llHG~~~~~~~~~~~~~~l~~~g~~via~D~~G~G~S~~~~~~~~~~~~~~~d~~~~l~~~~~~~~~~~~~lvG~S~G 107 (276)
T PHA02857 28 VFISHGAGEHSGRYEELAENISSLGILVFSHDHIGHGRSNGEKMMIDDFGVYVRDVVQHVVTIKSTYPGVPVFLLGHSMG 107 (276)
T ss_pred EEEeCCCccccchHHHHHHHHHhCCCEEEEccCCCCCCCCCccCCcCCHHHHHHHHHHHHHHHHhhCCCCCEEEEEcCch
Confidence 45669999999999999999976 899999999999998 211 13 4555565555443 3468999999999
Q ss_pred HHHHHHHHHhCcccccceEEecCCC
Q psy1324 70 GSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 70 g~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
|.+++.++.++|++++++|++++..
T Consensus 108 G~ia~~~a~~~p~~i~~lil~~p~~ 132 (276)
T PHA02857 108 ATISILAAYKNPNLFTAMILMSPLV 132 (276)
T ss_pred HHHHHHHHHhCccccceEEEecccc
Confidence 9999999999999999999999864
No 26
>TIGR01738 bioH putative pimeloyl-BioC--CoA transferase BioH. This CoA-binding enzyme is required for the production of pimeloyl-coenzyme A, the substrate of the BioF protein early in the biosynthesis of biotin. Its exact function is unknown, but is proposed in ref 2. This enzyme belongs to the alpha/beta hydrolase fold family (pfam model pfam00561). Members of this family are restricted to the Proteobacteria.
Probab=99.81 E-value=3.7e-19 Score=113.76 Aligned_cols=93 Identities=16% Similarity=0.256 Sum_probs=74.8
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCCc-cchhhHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHh
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRTI-ADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDK 79 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~-~~~~~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~ 79 (115)
||++||++++...|..+.+.|.++|+|+++|+||+|.|+ ...+...+....+.+ ...++++++||||||.+++.++.+
T Consensus 7 iv~~HG~~~~~~~~~~~~~~l~~~~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~-~~~~~~~lvG~S~Gg~~a~~~a~~ 85 (245)
T TIGR01738 7 LVLIHGWGMNAEVFRCLDEELSAHFTLHLVDLPGHGRSRGFGPLSLADAAEAIAA-QAPDPAIWLGWSLGGLVALHIAAT 85 (245)
T ss_pred EEEEcCCCCchhhHHHHHHhhccCeEEEEecCCcCccCCCCCCcCHHHHHHHHHH-hCCCCeEEEEEcHHHHHHHHHHHH
Confidence 689999999999999999999889999999999999982 221222222222222 223789999999999999999999
Q ss_pred CcccccceEEecCCC
Q psy1324 80 YPELVVKSIIINVPH 94 (115)
Q Consensus 80 ~~~~v~~~v~~~~~~ 94 (115)
+|+++++++++++.+
T Consensus 86 ~p~~v~~~il~~~~~ 100 (245)
T TIGR01738 86 HPDRVRALVTVASSP 100 (245)
T ss_pred CHHhhheeeEecCCc
Confidence 999999999998754
No 27
>PRK10749 lysophospholipase L2; Provisional
Probab=99.81 E-value=5.5e-19 Score=119.40 Aligned_cols=94 Identities=18% Similarity=0.276 Sum_probs=80.3
Q ss_pred CEeecCCCCCHhhHHHHHHhhh-CCceEEEecCCCCCCC--cc-c-------hh-hHHHHHHHHHHHh----CCCCeeEE
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFS-HEYWTVAVDIKTNFRT--IA-D-------RY-FLVDSLKVFLDHL----GRNRCILI 64 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~s--~~-~-------~~-~~~~~~~~~~~~~----~~~~~~lv 64 (115)
||++||++.+...|..+...+. .+|.|+++|+||+|.| +. . .+ .+++++.++++.+ +..+++++
T Consensus 57 vll~HG~~~~~~~y~~~~~~l~~~g~~v~~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~d~~~~~~~~~~~~~~~~~~l~ 136 (330)
T PRK10749 57 VVICPGRIESYVKYAELAYDLFHLGYDVLIIDHRGQGRSGRLLDDPHRGHVERFNDYVDDLAAFWQQEIQPGPYRKRYAL 136 (330)
T ss_pred EEEECCccchHHHHHHHHHHHHHCCCeEEEEcCCCCCCCCCCCCCCCcCccccHHHHHHHHHHHHHHHHhcCCCCCeEEE
Confidence 6899999999989999887764 5999999999999998 21 1 13 7778888888776 56799999
Q ss_pred EEchhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 65 GRDFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 65 g~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
||||||.+++.++.++|++++++|++++..
T Consensus 137 GhSmGG~ia~~~a~~~p~~v~~lvl~~p~~ 166 (330)
T PRK10749 137 AHSMGGAILTLFLQRHPGVFDAIALCAPMF 166 (330)
T ss_pred EEcHHHHHHHHHHHhCCCCcceEEEECchh
Confidence 999999999999999999999999998753
No 28
>PRK08775 homoserine O-acetyltransferase; Provisional
Probab=99.80 E-value=1.7e-19 Score=122.44 Aligned_cols=94 Identities=18% Similarity=0.334 Sum_probs=79.6
Q ss_pred CEeecCCCCCHh------------hHHHHHH---hh-hCCceEEEecCCCCCCCccchh---hHHHHHHHHHHHhCCCCe
Q psy1324 1 MLFLHGFPESWY------------IWKHQMS---EF-SHEYWTVAVDIKTNFRTIADRY---FLVDSLKVFLDHLGRNRC 61 (115)
Q Consensus 1 vl~~hG~~~~~~------------~~~~~~~---~l-~~~~~v~~~d~~g~g~s~~~~~---~~~~~~~~~~~~~~~~~~ 61 (115)
+||+||...+.. .|..++. .| +++|+|+++|+||+|.|+...+ .+++++.+++++++.++.
T Consensus 60 ~vll~g~~~~~~~~~~~~~~~~~~~w~~~v~~~~~L~~~~~~Vi~~Dl~G~g~s~~~~~~~~~~a~dl~~ll~~l~l~~~ 139 (343)
T PRK08775 60 VVFVAGGISAHRHVAATATFPEKGWWEGLVGSGRALDPARFRLLAFDFIGADGSLDVPIDTADQADAIALLLDALGIARL 139 (343)
T ss_pred EEEEecCCCcccccccccCCCCCCcchhccCCCCccCccccEEEEEeCCCCCCCCCCCCCHHHHHHHHHHHHHHcCCCcc
Confidence 478888877665 6888886 56 4689999999999998832222 789999999999998765
Q ss_pred -eEEEEchhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 62 -ILIGRDFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 62 -~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
+++||||||++++.++.++|++++++|++++..
T Consensus 140 ~~lvG~SmGG~vA~~~A~~~P~~V~~LvLi~s~~ 173 (343)
T PRK08775 140 HAFVGYSYGALVGLQFASRHPARVRTLVVVSGAH 173 (343)
T ss_pred eEEEEECHHHHHHHHHHHHChHhhheEEEECccc
Confidence 799999999999999999999999999998764
No 29
>PLN02894 hydrolase, alpha/beta fold family protein
Probab=99.79 E-value=1.1e-18 Score=120.71 Aligned_cols=94 Identities=19% Similarity=0.323 Sum_probs=80.9
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC--ccchh--------hHHHHHHHHHHHhCCCCeeEEEEchhH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT--IADRY--------FLVDSLKVFLDHLGRNRCILIGRDFGG 70 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s--~~~~~--------~~~~~~~~~~~~~~~~~~~lvg~S~Gg 70 (115)
|||+||++.+...|......+.++|+|+++|+||+|.| +...+ ..++++.++++.++.++++++||||||
T Consensus 108 vvllHG~~~~~~~~~~~~~~L~~~~~vi~~D~rG~G~S~~~~~~~~~~~~~~~~~~~~i~~~~~~l~~~~~~lvGhS~GG 187 (402)
T PLN02894 108 LVMVHGYGASQGFFFRNFDALASRFRVIAIDQLGWGGSSRPDFTCKSTEETEAWFIDSFEEWRKAKNLSNFILLGHSFGG 187 (402)
T ss_pred EEEECCCCcchhHHHHHHHHHHhCCEEEEECCCCCCCCCCCCcccccHHHHHHHHHHHHHHHHHHcCCCCeEEEEECHHH
Confidence 68999999999999888888888999999999999998 22111 245667777888888999999999999
Q ss_pred HHHHHHHHhCcccccceEEecCCC
Q psy1324 71 SLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 71 ~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
.+++.++.++|++++++|++++..
T Consensus 188 ~la~~~a~~~p~~v~~lvl~~p~~ 211 (402)
T PLN02894 188 YVAAKYALKHPEHVQHLILVGPAG 211 (402)
T ss_pred HHHHHHHHhCchhhcEEEEECCcc
Confidence 999999999999999999998654
No 30
>PLN02298 hydrolase, alpha/beta fold family protein
Probab=99.79 E-value=1.1e-18 Score=117.78 Aligned_cols=94 Identities=14% Similarity=0.260 Sum_probs=76.5
Q ss_pred CEeecCCCCCHh-hHHHHHHhhhC-CceEEEecCCCCCCCc--cch---h-hHHHHHHHHHHHhCC------CCeeEEEE
Q psy1324 1 MLFLHGFPESWY-IWKHQMSEFSH-EYWTVAVDIKTNFRTI--ADR---Y-FLVDSLKVFLDHLGR------NRCILIGR 66 (115)
Q Consensus 1 vl~~hG~~~~~~-~~~~~~~~l~~-~~~v~~~d~~g~g~s~--~~~---~-~~~~~~~~~~~~~~~------~~~~lvg~ 66 (115)
|||+||++.+.. .|..+...|.+ +|+|+++|+||+|.|. ... + ..++++.++++.+.. .+++++||
T Consensus 62 VvllHG~~~~~~~~~~~~~~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~i~l~Gh 141 (330)
T PLN02298 62 IFMVHGYGNDISWTFQSTAIFLAQMGFACFALDLEGHGRSEGLRAYVPNVDLVVEDCLSFFNSVKQREEFQGLPRFLYGE 141 (330)
T ss_pred EEEEcCCCCCcceehhHHHHHHHhCCCEEEEecCCCCCCCCCccccCCCHHHHHHHHHHHHHHHHhcccCCCCCEEEEEe
Confidence 689999986643 56777777865 8999999999999982 221 3 667788888877642 37899999
Q ss_pred chhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 67 DFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 67 S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
||||.+++.++.++|++++++|++++..
T Consensus 142 SmGG~ia~~~a~~~p~~v~~lvl~~~~~ 169 (330)
T PLN02298 142 SMGGAICLLIHLANPEGFDGAVLVAPMC 169 (330)
T ss_pred cchhHHHHHHHhcCcccceeEEEecccc
Confidence 9999999999999999999999998753
No 31
>COG2267 PldB Lysophospholipase [Lipid metabolism]
Probab=99.77 E-value=4.5e-18 Score=113.65 Aligned_cols=97 Identities=19% Similarity=0.373 Sum_probs=84.0
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCCCCCc-cch-----h-hHHHHHHHHHHHhC----CCCeeEEEEch
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFRTI-ADR-----Y-FLVDSLKVFLDHLG----RNRCILIGRDF 68 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s~-~~~-----~-~~~~~~~~~~~~~~----~~~~~lvg~S~ 68 (115)
||++||++.+...|.++++.|.. ||.|+++|+||+|.|+ ... | ++..++..+++... ..+++++||||
T Consensus 37 Vvl~HG~~Eh~~ry~~la~~l~~~G~~V~~~D~RGhG~S~r~~rg~~~~f~~~~~dl~~~~~~~~~~~~~~p~~l~gHSm 116 (298)
T COG2267 37 VVLVHGLGEHSGRYEELADDLAARGFDVYALDLRGHGRSPRGQRGHVDSFADYVDDLDAFVETIAEPDPGLPVFLLGHSM 116 (298)
T ss_pred EEEecCchHHHHHHHHHHHHHHhCCCEEEEecCCCCCCCCCCCcCCchhHHHHHHHHHHHHHHHhccCCCCCeEEEEeCc
Confidence 68999999999999999999865 9999999999999994 222 4 77777877777764 36999999999
Q ss_pred hHHHHHHHHHhCcccccceEEecCCCChh
Q psy1324 69 GGSLVWSFLDKYPELVVKSIIINVPHPAV 97 (115)
Q Consensus 69 Gg~~a~~~~~~~~~~v~~~v~~~~~~~~~ 97 (115)
||.++..++.+++..++++|+.+|.....
T Consensus 117 Gg~Ia~~~~~~~~~~i~~~vLssP~~~l~ 145 (298)
T COG2267 117 GGLIALLYLARYPPRIDGLVLSSPALGLG 145 (298)
T ss_pred HHHHHHHHHHhCCccccEEEEECccccCC
Confidence 99999999999999999999999876554
No 32
>TIGR01250 pro_imino_pep_2 proline-specific peptidases, Bacillus coagulans-type subfamily. This model describes a subfamily of the alpha/beta fold family of hydrolases. Characterized members include prolinases (Pro-Xaa dipeptidase, EC 3.4.13.8), prolyl aminopeptidases (EC 3.4.11.5), and a leucyl aminopeptidase
Probab=99.76 E-value=1e-17 Score=109.41 Aligned_cols=94 Identities=21% Similarity=0.290 Sum_probs=78.7
Q ss_pred CEeecCCCCCH-hhHHHHHHhhhC-CceEEEecCCCCCCC--cc-ch--h---hHHHHHHHHHHHhCCCCeeEEEEchhH
Q psy1324 1 MLFLHGFPESW-YIWKHQMSEFSH-EYWTVAVDIKTNFRT--IA-DR--Y---FLVDSLKVFLDHLGRNRCILIGRDFGG 70 (115)
Q Consensus 1 vl~~hG~~~~~-~~~~~~~~~l~~-~~~v~~~d~~g~g~s--~~-~~--~---~~~~~~~~~~~~~~~~~~~lvg~S~Gg 70 (115)
||++||++++. ..|..+...+.+ +|+|+++|+||+|.| +. .. + .+++++.+++++++.++++++||||||
T Consensus 28 vl~~hG~~g~~~~~~~~~~~~l~~~g~~vi~~d~~G~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~liG~S~Gg 107 (288)
T TIGR01250 28 LLLLHGGPGMSHEYLENLRELLKEEGREVIMYDQLGCGYSDQPDDSDELWTIDYFVDELEEVREKLGLDKFYLLGHSWGG 107 (288)
T ss_pred EEEEcCCCCccHHHHHHHHHHHHhcCCEEEEEcCCCCCCCCCCCcccccccHHHHHHHHHHHHHHcCCCcEEEEEeehHH
Confidence 68999986554 556666667776 899999999999998 21 11 2 788888899999988899999999999
Q ss_pred HHHHHHHHhCcccccceEEecCCC
Q psy1324 71 SLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 71 ~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
.+++.++.++|+++++++++++..
T Consensus 108 ~ia~~~a~~~p~~v~~lvl~~~~~ 131 (288)
T TIGR01250 108 MLAQEYALKYGQHLKGLIISSMLD 131 (288)
T ss_pred HHHHHHHHhCccccceeeEecccc
Confidence 999999999999999999988654
No 33
>TIGR01392 homoserO_Ac_trn homoserine O-acetyltransferase. This family describes homoserine-O-acetyltransferase, an enzyme of methionine biosynthesis. This model has been rebuilt to identify sequences more broadly, including a number of sequences suggested to be homoserine O-acetyltransferase based on proximity to other Met biosynthesis genes.
Probab=99.76 E-value=3.4e-18 Score=116.40 Aligned_cols=95 Identities=21% Similarity=0.367 Sum_probs=79.1
Q ss_pred CEeecCCCCCHh-----------hHHHHHH---hh-hCCceEEEecCCC--CCCC-cc-----c--------hh---hHH
Q psy1324 1 MLFLHGFPESWY-----------IWKHQMS---EF-SHEYWTVAVDIKT--NFRT-IA-----D--------RY---FLV 46 (115)
Q Consensus 1 vl~~hG~~~~~~-----------~~~~~~~---~l-~~~~~v~~~d~~g--~g~s-~~-----~--------~~---~~~ 46 (115)
||++||++++.. .|+.++. .+ .++|.|+++|+|| +|.+ +. . .+ +++
T Consensus 34 vll~Hg~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~D~~G~~~g~s~~~~~~~~~~~~~~~~~~~~~~~~~ 113 (351)
T TIGR01392 34 VLVCHALTGDAHVAGYHDDGDPGWWDDLIGPGRAIDTDRYFVVCSNVLGGCYGSTGPSSINPGGRPYGSDFPLITIRDDV 113 (351)
T ss_pred EEEcCCcCcchhhcccCCCCCCCchhhccCCCCCcCCCceEEEEecCCCCCCCCCCCCCCCCCCCcCCCCCCCCcHHHHH
Confidence 689999999763 4777762 33 5699999999999 5555 21 0 12 888
Q ss_pred HHHHHHHHHhCCCC-eeEEEEchhHHHHHHHHHhCcccccceEEecCCCC
Q psy1324 47 DSLKVFLDHLGRNR-CILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 47 ~~~~~~~~~~~~~~-~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~ 95 (115)
+++.+++++++.++ ++++||||||.+++.++.++|+++++++++++.+.
T Consensus 114 ~~~~~~~~~l~~~~~~~l~G~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 163 (351)
T TIGR01392 114 KAQKLLLDHLGIEQIAAVVGGSMGGMQALEWAIDYPERVRAIVVLATSAR 163 (351)
T ss_pred HHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEccCCc
Confidence 99999999999998 99999999999999999999999999999998764
No 34
>PRK14875 acetoin dehydrogenase E2 subunit dihydrolipoyllysine-residue acetyltransferase; Provisional
Probab=99.76 E-value=9.2e-18 Score=114.41 Aligned_cols=94 Identities=22% Similarity=0.392 Sum_probs=84.2
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC-cc-ch--h-hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT-IA-DR--Y-FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWS 75 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s-~~-~~--~-~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~ 75 (115)
|||+||++++...|..+...|.++|+|+++|+||+|.+ +. .. + ++++++.++++.++.++++++|||+||.++..
T Consensus 134 vl~~HG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~G~s~~~~~~~~~~~~~~~~~~~~~~~~~~~~~lvG~S~Gg~~a~~ 213 (371)
T PRK14875 134 VVLIHGFGGDLNNWLFNHAALAAGRPVIALDLPGHGASSKAVGAGSLDELAAAVLAFLDALGIERAHLVGHSMGGAVALR 213 (371)
T ss_pred EEEECCCCCccchHHHHHHHHhcCCEEEEEcCCCCCCCCCCCCCCCHHHHHHHHHHHHHhcCCccEEEEeechHHHHHHH
Confidence 68999999999999999999988899999999999998 22 11 3 88888899999998889999999999999999
Q ss_pred HHHhCcccccceEEecCCC
Q psy1324 76 FLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 76 ~~~~~~~~v~~~v~~~~~~ 94 (115)
++.++|+++.+++++++..
T Consensus 214 ~a~~~~~~v~~lv~~~~~~ 232 (371)
T PRK14875 214 LAARAPQRVASLTLIAPAG 232 (371)
T ss_pred HHHhCchheeEEEEECcCC
Confidence 9999999999999998753
No 35
>TIGR03101 hydr2_PEP hydrolase, ortholog 2, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 1, TIGR03100) of the same superfamily.
Probab=99.75 E-value=2.9e-17 Score=108.06 Aligned_cols=95 Identities=13% Similarity=0.178 Sum_probs=75.0
Q ss_pred CEeecCCCCC----HhhHHHHHHhhhC-CceEEEecCCCCCCCc--cch--h-hHHHHHHH---HHHHhCCCCeeEEEEc
Q psy1324 1 MLFLHGFPES----WYIWKHQMSEFSH-EYWTVAVDIKTNFRTI--ADR--Y-FLVDSLKV---FLDHLGRNRCILIGRD 67 (115)
Q Consensus 1 vl~~hG~~~~----~~~~~~~~~~l~~-~~~v~~~d~~g~g~s~--~~~--~-~~~~~~~~---~~~~~~~~~~~lvg~S 67 (115)
||++||++.+ ...|..+.+.|++ +|.|+++|+||+|.|. ... + .+.+++.. ++++.+.++++++|||
T Consensus 28 VlllHG~g~~~~~~~~~~~~la~~La~~Gy~Vl~~Dl~G~G~S~g~~~~~~~~~~~~Dv~~ai~~L~~~~~~~v~LvG~S 107 (266)
T TIGR03101 28 VIYLPPFAEEMNKSRRMVALQARAFAAGGFGVLQIDLYGCGDSAGDFAAARWDVWKEDVAAAYRWLIEQGHPPVTLWGLR 107 (266)
T ss_pred EEEECCCcccccchhHHHHHHHHHHHHCCCEEEEECCCCCCCCCCccccCCHHHHHHHHHHHHHHHHhcCCCCEEEEEEC
Confidence 5799999864 3457777888865 9999999999999982 111 3 45555544 4455566899999999
Q ss_pred hhHHHHHHHHHhCcccccceEEecCCCC
Q psy1324 68 FGGSLVWSFLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 68 ~Gg~~a~~~~~~~~~~v~~~v~~~~~~~ 95 (115)
|||.+++.++.++|++++++|++++...
T Consensus 108 mGG~vAl~~A~~~p~~v~~lVL~~P~~~ 135 (266)
T TIGR03101 108 LGALLALDAANPLAAKCNRLVLWQPVVS 135 (266)
T ss_pred HHHHHHHHHHHhCccccceEEEeccccc
Confidence 9999999999999999999999987543
No 36
>TIGR01249 pro_imino_pep_1 proline iminopeptidase, Neisseria-type subfamily. This model represents one of two related families of proline iminopeptidase in the alpha/beta fold hydrolase family. The fine specificities of the various members, including both the range of short peptides from which proline can be removed and whether other amino acids such as alanine can be also removed, may vary among members.
Probab=99.74 E-value=1.6e-17 Score=111.15 Aligned_cols=93 Identities=22% Similarity=0.282 Sum_probs=76.2
Q ss_pred CEeecCCCCCHhhHHHHHHhhh-CCceEEEecCCCCCCC-ccch-----h-hHHHHHHHHHHHhCCCCeeEEEEchhHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFS-HEYWTVAVDIKTNFRT-IADR-----Y-FLVDSLKVFLDHLGRNRCILIGRDFGGSL 72 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~s-~~~~-----~-~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~ 72 (115)
||++||++++...+ .+...+. ++|+|+++|+||+|.| +... . +.++++..++++++.++++++||||||.+
T Consensus 30 lvllHG~~~~~~~~-~~~~~~~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~dl~~l~~~l~~~~~~lvG~S~GG~i 108 (306)
T TIGR01249 30 VVFLHGGPGSGTDP-GCRRFFDPETYRIVLFDQRGCGKSTPHACLEENTTWDLVADIEKLREKLGIKNWLVFGGSWGSTL 108 (306)
T ss_pred EEEECCCCCCCCCH-HHHhccCccCCEEEEECCCCCCCCCCCCCcccCCHHHHHHHHHHHHHHcCCCCEEEEEECHHHHH
Confidence 58999987765543 3333443 4899999999999999 2211 2 67888888999998899999999999999
Q ss_pred HHHHHHhCcccccceEEecCCC
Q psy1324 73 VWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 73 a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
++.++.++|++++++|++++..
T Consensus 109 a~~~a~~~p~~v~~lvl~~~~~ 130 (306)
T TIGR01249 109 ALAYAQTHPEVVTGLVLRGIFL 130 (306)
T ss_pred HHHHHHHChHhhhhheeecccc
Confidence 9999999999999999998654
No 37
>COG1647 Esterase/lipase [General function prediction only]
Probab=99.74 E-value=3.8e-17 Score=103.07 Aligned_cols=95 Identities=17% Similarity=0.150 Sum_probs=79.6
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCCCCCccch----h-hHHHHHHHHHHH---hCCCCeeEEEEchhHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFRTIADR----Y-FLVDSLKVFLDH---LGRNRCILIGRDFGGS 71 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s~~~~----~-~~~~~~~~~~~~---~~~~~~~lvg~S~Gg~ 71 (115)
|+++||++++..+.+.+.+.|.+ ||+|.+|.+||||..|.+- . +|.+++.+..+. .+.+.|.++|.||||.
T Consensus 18 VLllHGFTGt~~Dvr~Lgr~L~e~GyTv~aP~ypGHG~~~e~fl~t~~~DW~~~v~d~Y~~L~~~gy~eI~v~GlSmGGv 97 (243)
T COG1647 18 VLLLHGFTGTPRDVRMLGRYLNENGYTVYAPRYPGHGTLPEDFLKTTPRDWWEDVEDGYRDLKEAGYDEIAVVGLSMGGV 97 (243)
T ss_pred EEEEeccCCCcHHHHHHHHHHHHCCceEecCCCCCCCCCHHHHhcCCHHHHHHHHHHHHHHHHHcCCCeEEEEeecchhH
Confidence 68999999999999999999976 9999999999999884332 1 555555555444 4678999999999999
Q ss_pred HHHHHHHhCcccccceEEecCCCChh
Q psy1324 72 LVWSFLDKYPELVVKSIIINVPHPAV 97 (115)
Q Consensus 72 ~a~~~~~~~~~~v~~~v~~~~~~~~~ 97 (115)
+++.++..+| +++++.++++....
T Consensus 98 ~alkla~~~p--~K~iv~m~a~~~~k 121 (243)
T COG1647 98 FALKLAYHYP--PKKIVPMCAPVNVK 121 (243)
T ss_pred HHHHHHhhCC--ccceeeecCCcccc
Confidence 9999999997 89999999886533
No 38
>KOG1454|consensus
Probab=99.74 E-value=1.1e-17 Score=112.93 Aligned_cols=91 Identities=24% Similarity=0.454 Sum_probs=80.1
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCC--ceEEEecCCCCCCC---ccch-h---hHHHHHHHHHHHhCCCCeeEEEEchhHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHE--YWTVAVDIKTNFRT---IADR-Y---FLVDSLKVFLDHLGRNRCILIGRDFGGS 71 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~--~~v~~~d~~g~g~s---~~~~-~---~~~~~~~~~~~~~~~~~~~lvg~S~Gg~ 71 (115)
||++||++.+...|+.....+.+. +.++++|++|+|.+ +.+. | ++.+.+..+......++++++|||+||.
T Consensus 61 vlllHGF~~~~~~w~~~~~~L~~~~~~~v~aiDl~G~g~~s~~~~~~~y~~~~~v~~i~~~~~~~~~~~~~lvghS~Gg~ 140 (326)
T KOG1454|consen 61 VLLLHGFGASSFSWRRVVPLLSKAKGLRVLAIDLPGHGYSSPLPRGPLYTLRELVELIRRFVKEVFVEPVSLVGHSLGGI 140 (326)
T ss_pred EEEeccccCCcccHhhhccccccccceEEEEEecCCCCcCCCCCCCCceehhHHHHHHHHHHHhhcCcceEEEEeCcHHH
Confidence 689999999999999999999774 99999999999954 3333 4 8888888888888888999999999999
Q ss_pred HHHHHHHhCcccccceEEec
Q psy1324 72 LVWSFLDKYPELVVKSIIIN 91 (115)
Q Consensus 72 ~a~~~~~~~~~~v~~~v~~~ 91 (115)
++..+|+.+|+.|+++++++
T Consensus 141 va~~~Aa~~P~~V~~lv~~~ 160 (326)
T KOG1454|consen 141 VALKAAAYYPETVDSLVLLD 160 (326)
T ss_pred HHHHHHHhCcccccceeeec
Confidence 99999999999999999443
No 39
>PRK07581 hypothetical protein; Validated
Probab=99.73 E-value=1.2e-17 Score=113.18 Aligned_cols=95 Identities=13% Similarity=0.329 Sum_probs=73.2
Q ss_pred CEeecCCCCCHhhHHHHH---Hhhh-CCceEEEecCCCCCCC--ccc---hh--------hHHHHHHH----HHHHhCCC
Q psy1324 1 MLFLHGFPESWYIWKHQM---SEFS-HEYWTVAVDIKTNFRT--IAD---RY--------FLVDSLKV----FLDHLGRN 59 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~---~~l~-~~~~v~~~d~~g~g~s--~~~---~~--------~~~~~~~~----~~~~~~~~ 59 (115)
||+.||++.+...|..++ ..+. ++|+|+++|+||+|.| +.. .| ...+++.. ++++++.+
T Consensus 44 vll~~~~~~~~~~~~~~~~~~~~l~~~~~~vi~~D~~G~G~S~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~lgi~ 123 (339)
T PRK07581 44 ILYPTWYSGTHQDNEWLIGPGRALDPEKYFIIIPNMFGNGLSSSPSNTPAPFNAARFPHVTIYDNVRAQHRLLTEKFGIE 123 (339)
T ss_pred EEEeCCCCCCcccchhhccCCCccCcCceEEEEecCCCCCCCCCCCCCCCCCCCCCCCceeHHHHHHHHHHHHHHHhCCC
Confidence 355666676766676543 3564 5899999999999999 321 12 24566654 66789999
Q ss_pred Ce-eEEEEchhHHHHHHHHHhCcccccceEEecCCCC
Q psy1324 60 RC-ILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 60 ~~-~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~ 95 (115)
++ +++||||||++++.++.++|++|+++|++++.+.
T Consensus 124 ~~~~lvG~S~GG~va~~~a~~~P~~V~~Lvli~~~~~ 160 (339)
T PRK07581 124 RLALVVGWSMGAQQTYHWAVRYPDMVERAAPIAGTAK 160 (339)
T ss_pred ceEEEEEeCHHHHHHHHHHHHCHHHHhhheeeecCCC
Confidence 94 7999999999999999999999999999987653
No 40
>PLN02980 2-oxoglutarate decarboxylase/ hydro-lyase/ magnesium ion binding / thiamin pyrophosphate binding
Probab=99.73 E-value=3.1e-17 Score=128.22 Aligned_cols=94 Identities=19% Similarity=0.371 Sum_probs=83.9
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC--cc-------c-hh---hHHHHHHHHHHHhCCCCeeEEEEc
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT--IA-------D-RY---FLVDSLKVFLDHLGRNRCILIGRD 67 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s--~~-------~-~~---~~~~~~~~~~~~~~~~~~~lvg~S 67 (115)
|||+||++++...|.++.+.|.++|+|+++|+||+|.| +. . .+ .+++++.+++++++.++++++|||
T Consensus 1374 vVllHG~~~s~~~w~~~~~~L~~~~rVi~~Dl~G~G~S~~~~~~~~~~~~~~~si~~~a~~l~~ll~~l~~~~v~LvGhS 1453 (1655)
T PLN02980 1374 VLFLHGFLGTGEDWIPIMKAISGSARCISIDLPGHGGSKIQNHAKETQTEPTLSVELVADLLYKLIEHITPGKVTLVGYS 1453 (1655)
T ss_pred EEEECCCCCCHHHHHHHHHHHhCCCEEEEEcCCCCCCCCCccccccccccccCCHHHHHHHHHHHHHHhCCCCEEEEEEC
Confidence 68999999999999999999988999999999999998 21 1 12 677888888999988999999999
Q ss_pred hhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 68 FGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 68 ~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
|||.+++.++.++|+++++++++++.+
T Consensus 1454 mGG~iAl~~A~~~P~~V~~lVlis~~p 1480 (1655)
T PLN02980 1454 MGARIALYMALRFSDKIEGAVIISGSP 1480 (1655)
T ss_pred HHHHHHHHHHHhChHhhCEEEEECCCC
Confidence 999999999999999999999998653
No 41
>PRK00175 metX homoserine O-acetyltransferase; Provisional
Probab=99.71 E-value=6e-17 Score=111.40 Aligned_cols=95 Identities=18% Similarity=0.371 Sum_probs=78.4
Q ss_pred CEeecCCCCCHhh-------------HHHHHH---hh-hCCceEEEecCCCC-CCC--cc--------------chh---
Q psy1324 1 MLFLHGFPESWYI-------------WKHQMS---EF-SHEYWTVAVDIKTN-FRT--IA--------------DRY--- 43 (115)
Q Consensus 1 vl~~hG~~~~~~~-------------~~~~~~---~l-~~~~~v~~~d~~g~-g~s--~~--------------~~~--- 43 (115)
||++||++++... |+.++. .+ .++|+|+++|++|+ +.| +. ..|
T Consensus 51 vvl~HG~~~~~~~~~~~~~~~~~~~~w~~~~~~~~~l~~~~~~vi~~Dl~G~~~~s~~~~~~~~~~~~~~~~~~~~~~~~ 130 (379)
T PRK00175 51 VLICHALTGDHHVAGPHSPDDPKPGWWDNMVGPGKPIDTDRYFVICSNVLGGCKGSTGPSSINPDTGKPYGSDFPVITIR 130 (379)
T ss_pred EEEeCCcCCchhhcccccccCCCCcchhhccCCCCccCccceEEEeccCCCCCCCCCCCCCCCCCCCCcccCCCCcCCHH
Confidence 6899999999874 666652 33 66999999999983 322 21 023
Q ss_pred hHHHHHHHHHHHhCCCCe-eEEEEchhHHHHHHHHHhCcccccceEEecCCCC
Q psy1324 44 FLVDSLKVFLDHLGRNRC-ILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~-~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~ 95 (115)
.+++++.+++++++.+++ +++||||||.+++.++.++|+++++++++++...
T Consensus 131 ~~~~~~~~~l~~l~~~~~~~lvG~S~Gg~ia~~~a~~~p~~v~~lvl~~~~~~ 183 (379)
T PRK00175 131 DWVRAQARLLDALGITRLAAVVGGSMGGMQALEWAIDYPDRVRSALVIASSAR 183 (379)
T ss_pred HHHHHHHHHHHHhCCCCceEEEEECHHHHHHHHHHHhChHhhhEEEEECCCcc
Confidence 889999999999999984 8999999999999999999999999999997764
No 42
>PLN02652 hydrolase; alpha/beta fold family protein
Probab=99.69 E-value=2e-16 Score=109.26 Aligned_cols=93 Identities=18% Similarity=0.352 Sum_probs=75.1
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCCCCCccc-h----h-hHHHHHHHHHHHhC----CCCeeEEEEchh
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFRTIAD-R----Y-FLVDSLKVFLDHLG----RNRCILIGRDFG 69 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s~~~-~----~-~~~~~~~~~~~~~~----~~~~~lvg~S~G 69 (115)
||++||++.+...|.++.+.|.+ +|.|+++|+||||.|+.. . + .+.+++.++++.+. ..+++++|||||
T Consensus 139 Vl~lHG~~~~~~~~~~~a~~L~~~Gy~V~~~D~rGhG~S~~~~~~~~~~~~~~~Dl~~~l~~l~~~~~~~~i~lvGhSmG 218 (395)
T PLN02652 139 LIIIHGLNEHSGRYLHFAKQLTSCGFGVYAMDWIGHGGSDGLHGYVPSLDYVVEDTEAFLEKIRSENPGVPCFLFGHSTG 218 (395)
T ss_pred EEEECCchHHHHHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCCcCHHHHHHHHHHHHHHHHHhCCCCCEEEEEECHH
Confidence 58999999999999999999965 999999999999998221 1 2 55677777777664 247999999999
Q ss_pred HHHHHHHHHhCc---ccccceEEecCCC
Q psy1324 70 GSLVWSFLDKYP---ELVVKSIIINVPH 94 (115)
Q Consensus 70 g~~a~~~~~~~~---~~v~~~v~~~~~~ 94 (115)
|.+++.++. +| ++++++++.++..
T Consensus 219 G~ial~~a~-~p~~~~~v~glVL~sP~l 245 (395)
T PLN02652 219 GAVVLKAAS-YPSIEDKLEGIVLTSPAL 245 (395)
T ss_pred HHHHHHHHh-ccCcccccceEEEECccc
Confidence 999998765 55 4799999988753
No 43
>PRK05855 short chain dehydrogenase; Validated
Probab=99.69 E-value=3e-16 Score=112.15 Aligned_cols=94 Identities=19% Similarity=0.446 Sum_probs=77.6
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC--ccc--hh---hHHHHHHHHHHHhCCCC-eeEEEEchhHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT--IAD--RY---FLVDSLKVFLDHLGRNR-CILIGRDFGGSL 72 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s--~~~--~~---~~~~~~~~~~~~~~~~~-~~lvg~S~Gg~~ 72 (115)
|||+||++++...|.++.+.|.++|+|+++|+||+|.| +.. .+ .+++++..++++++.++ ++++||||||.+
T Consensus 28 ivllHG~~~~~~~w~~~~~~L~~~~~Vi~~D~~G~G~S~~~~~~~~~~~~~~a~dl~~~i~~l~~~~~~~lvGhS~Gg~~ 107 (582)
T PRK05855 28 VVLVHGYPDNHEVWDGVAPLLADRFRVVAYDVRGAGRSSAPKRTAAYTLARLADDFAAVIDAVSPDRPVHLLAHDWGSIQ 107 (582)
T ss_pred EEEEcCCCchHHHHHHHHHHhhcceEEEEecCCCCCCCCCCCcccccCHHHHHHHHHHHHHHhCCCCcEEEEecChHHHH
Confidence 68999999999999999999988999999999999998 221 13 88999999999988655 999999999999
Q ss_pred HHHHHHh--CcccccceEEecCCC
Q psy1324 73 VWSFLDK--YPELVVKSIIINVPH 94 (115)
Q Consensus 73 a~~~~~~--~~~~v~~~v~~~~~~ 94 (115)
++.++.+ .++++..++.++++.
T Consensus 108 a~~~a~~~~~~~~v~~~~~~~~~~ 131 (582)
T PRK05855 108 GWEAVTRPRAAGRIASFTSVSGPS 131 (582)
T ss_pred HHHHHhCccchhhhhhheeccCCc
Confidence 9888776 245566665555543
No 44
>PLN02511 hydrolase
Probab=99.67 E-value=4.5e-16 Score=107.40 Aligned_cols=94 Identities=15% Similarity=0.291 Sum_probs=72.9
Q ss_pred CEeecCCCCCHhh-H-HHHHHhh-hCCceEEEecCCCCCCCc--cch-h--hHHHHHHHHHHHhCC----CCeeEEEEch
Q psy1324 1 MLFLHGFPESWYI-W-KHQMSEF-SHEYWTVAVDIKTNFRTI--ADR-Y--FLVDSLKVFLDHLGR----NRCILIGRDF 68 (115)
Q Consensus 1 vl~~hG~~~~~~~-~-~~~~~~l-~~~~~v~~~d~~g~g~s~--~~~-~--~~~~~~~~~~~~~~~----~~~~lvg~S~ 68 (115)
||++||++++... | ..+...+ .++|+|+++|+||+|.++ ... + ...+++.++++.+.. .+++++||||
T Consensus 103 vvllHG~~g~s~~~y~~~~~~~~~~~g~~vv~~d~rG~G~s~~~~~~~~~~~~~~Dl~~~i~~l~~~~~~~~~~lvG~Sl 182 (388)
T PLN02511 103 LILLPGLTGGSDDSYVRHMLLRARSKGWRVVVFNSRGCADSPVTTPQFYSASFTGDLRQVVDHVAGRYPSANLYAAGWSL 182 (388)
T ss_pred EEEECCCCCCCCCHHHHHHHHHHHHCCCEEEEEecCCCCCCCCCCcCEEcCCchHHHHHHHHHHHHHCCCCCEEEEEech
Confidence 6899999776533 4 4555544 569999999999999982 222 3 566677777776643 5899999999
Q ss_pred hHHHHHHHHHhCccc--ccceEEecCCC
Q psy1324 69 GGSLVWSFLDKYPEL--VVKSIIINVPH 94 (115)
Q Consensus 69 Gg~~a~~~~~~~~~~--v~~~v~~~~~~ 94 (115)
||.+++.++.++|++ +.+++.++++.
T Consensus 183 Gg~i~~~yl~~~~~~~~v~~~v~is~p~ 210 (388)
T PLN02511 183 GANILVNYLGEEGENCPLSGAVSLCNPF 210 (388)
T ss_pred hHHHHHHHHHhcCCCCCceEEEEECCCc
Confidence 999999999999987 88888887665
No 45
>KOG1455|consensus
Probab=99.67 E-value=7e-16 Score=101.36 Aligned_cols=94 Identities=18% Similarity=0.334 Sum_probs=77.6
Q ss_pred CEeecCCCCCH-hhHHHHHHhhhC-CceEEEecCCCCCCCccch-----h-hHHHHHHHHHHHhC------CCCeeEEEE
Q psy1324 1 MLFLHGFPESW-YIWKHQMSEFSH-EYWTVAVDIKTNFRTIADR-----Y-FLVDSLKVFLDHLG------RNRCILIGR 66 (115)
Q Consensus 1 vl~~hG~~~~~-~~~~~~~~~l~~-~~~v~~~d~~g~g~s~~~~-----~-~~~~~~~~~~~~~~------~~~~~lvg~ 66 (115)
|+++||++... ..|+.++.+|+. ||.|+++|++|||.|.... + ..++++..+.+... ..+.+++||
T Consensus 57 v~~~HG~g~~~s~~~~~~a~~l~~~g~~v~a~D~~GhG~SdGl~~yi~~~d~~v~D~~~~~~~i~~~~e~~~lp~FL~Ge 136 (313)
T KOG1455|consen 57 VFLCHGYGEHSSWRYQSTAKRLAKSGFAVYAIDYEGHGRSDGLHAYVPSFDLVVDDVISFFDSIKEREENKGLPRFLFGE 136 (313)
T ss_pred EEEEcCCcccchhhHHHHHHHHHhCCCeEEEeeccCCCcCCCCcccCCcHHHHHHHHHHHHHHHhhccccCCCCeeeeec
Confidence 58999998876 678888898876 9999999999999992222 3 66777777666542 347899999
Q ss_pred chhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 67 DFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 67 S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
||||.+++.++.++|+..+++|++++..
T Consensus 137 SMGGAV~Ll~~~k~p~~w~G~ilvaPmc 164 (313)
T KOG1455|consen 137 SMGGAVALLIALKDPNFWDGAILVAPMC 164 (313)
T ss_pred CcchHHHHHHHhhCCcccccceeeeccc
Confidence 9999999999999999999999998654
No 46
>TIGR03230 lipo_lipase lipoprotein lipase. Members of this protein family are lipoprotein lipase (EC 3.1.1.34), a eukaryotic triacylglycerol lipase active in plasma and similar to pancreatic and hepatic triacylglycerol lipases (EC 3.1.1.3). It is also called clearing factor. It cleaves chylomicron and VLDL triacylglycerols; it also has phospholipase A-1 activity.
Probab=99.65 E-value=2.7e-15 Score=104.29 Aligned_cols=96 Identities=13% Similarity=0.203 Sum_probs=72.6
Q ss_pred CEeecCCCCCH--hhHHH-HHHhhh---CCceEEEecCCCCCCC--ccch-h--hHHHHHHHHHHHh------CCCCeeE
Q psy1324 1 MLFLHGFPESW--YIWKH-QMSEFS---HEYWTVAVDIKTNFRT--IADR-Y--FLVDSLKVFLDHL------GRNRCIL 63 (115)
Q Consensus 1 vl~~hG~~~~~--~~~~~-~~~~l~---~~~~v~~~d~~g~g~s--~~~~-~--~~~~~~~~~~~~~------~~~~~~l 63 (115)
+|++||++.+. +.|.. +.+.+. .+++|+++|++|++.+ +... + ...+++.++++.+ +.+++++
T Consensus 44 vIlIHG~~~s~~~~~w~~~l~~al~~~~~d~nVI~VDw~g~g~s~y~~a~~~t~~vg~~la~lI~~L~~~~gl~l~~VhL 123 (442)
T TIGR03230 44 FIVIHGWTVTGMFESWVPKLVAALYEREPSANVIVVDWLSRAQQHYPTSAAYTKLVGKDVAKFVNWMQEEFNYPWDNVHL 123 (442)
T ss_pred EEEECCCCcCCcchhhHHHHHHHHHhccCCCEEEEEECCCcCCCCCccccccHHHHHHHHHHHHHHHHHhhCCCCCcEEE
Confidence 58999998653 45765 555442 2799999999999987 2211 2 3445555555543 3579999
Q ss_pred EEEchhHHHHHHHHHhCcccccceEEecCCCCh
Q psy1324 64 IGRDFGGSLVWSFLDKYPELVVKSIIINVPHPA 96 (115)
Q Consensus 64 vg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~~ 96 (115)
+||||||.++..++.+.|+++.+++.+++..|.
T Consensus 124 IGHSLGAhIAg~ag~~~p~rV~rItgLDPAgP~ 156 (442)
T TIGR03230 124 LGYSLGAHVAGIAGSLTKHKVNRITGLDPAGPT 156 (442)
T ss_pred EEECHHHHHHHHHHHhCCcceeEEEEEcCCCCc
Confidence 999999999999999999999999999987653
No 47
>PRK11071 esterase YqiA; Provisional
Probab=99.64 E-value=2.1e-15 Score=95.08 Aligned_cols=86 Identities=16% Similarity=0.176 Sum_probs=70.9
Q ss_pred CEeecCCCCCHhhHHH--HHHhhh---CCceEEEecCCCCCCCccchhhHHHHHHHHHHHhCCCCeeEEEEchhHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKH--QMSEFS---HEYWTVAVDIKTNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWS 75 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~--~~~~l~---~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~ 75 (115)
||++||++++...|+. +.+.+. .++.++++|+||++. +..+.+.+++++++.++++++||||||.+++.
T Consensus 4 illlHGf~ss~~~~~~~~~~~~l~~~~~~~~v~~~dl~g~~~------~~~~~l~~l~~~~~~~~~~lvG~S~Gg~~a~~ 77 (190)
T PRK11071 4 LLYLHGFNSSPRSAKATLLKNWLAQHHPDIEMIVPQLPPYPA------DAAELLESLVLEHGGDPLGLVGSSLGGYYATW 77 (190)
T ss_pred EEEECCCCCCcchHHHHHHHHHHHHhCCCCeEEeCCCCCCHH------HHHHHHHHHHHHcCCCCeEEEEECHHHHHHHH
Confidence 6899999999999874 334443 379999999999841 56778888899988899999999999999999
Q ss_pred HHHhCcccccceEEecCCCC
Q psy1324 76 FLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 76 ~~~~~~~~v~~~v~~~~~~~ 95 (115)
++.++|. ++++++++..
T Consensus 78 ~a~~~~~---~~vl~~~~~~ 94 (190)
T PRK11071 78 LSQCFML---PAVVVNPAVR 94 (190)
T ss_pred HHHHcCC---CEEEECCCCC
Confidence 9999983 4677877654
No 48
>PF12695 Abhydrolase_5: Alpha/beta hydrolase family; PDB: 3D0K_B 2I3D_B 3DOH_B 3DOI_B 3PFB_A 3S2Z_B 3PFC_A 3QM1_A 3PF8_B 3PF9_A ....
Probab=99.63 E-value=3.7e-15 Score=89.32 Aligned_cols=90 Identities=19% Similarity=0.252 Sum_probs=72.1
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCCCCCccchhhHHHHHHHHH-H-HhCCCCeeEEEEchhHHHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFRTIADRYFLVDSLKVFL-D-HLGRNRCILIGRDFGGSLVWSFL 77 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~-~-~~~~~~~~lvg~S~Gg~~a~~~~ 77 (115)
||++||.+++...|..+.+.+.+ +|.++.+|+|+++.+... ...+.+.+.+ + ..+.+++.++|||+||.+++.++
T Consensus 2 vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~~~~~~~~~~~~--~~~~~~~~~~~~~~~~~~~i~l~G~S~Gg~~a~~~~ 79 (145)
T PF12695_consen 2 VVLLHGWGGSRRDYQPLAEALAEQGYAVVAFDYPGHGDSDGA--DAVERVLADIRAGYPDPDRIILIGHSMGGAIAANLA 79 (145)
T ss_dssp EEEECTTTTTTHHHHHHHHHHHHTTEEEEEESCTTSTTSHHS--HHHHHHHHHHHHHHCTCCEEEEEEETHHHHHHHHHH
T ss_pred EEEECCCCCCHHHHHHHHHHHHHCCCEEEEEecCCCCccchh--HHHHHHHHHHHhhcCCCCcEEEEEEccCcHHHHHHh
Confidence 68999999999999999999865 999999999999988211 1222222222 2 23568999999999999999999
Q ss_pred HhCcccccceEEecCC
Q psy1324 78 DKYPELVVKSIIINVP 93 (115)
Q Consensus 78 ~~~~~~v~~~v~~~~~ 93 (115)
.++ .++++++++++.
T Consensus 80 ~~~-~~v~~~v~~~~~ 94 (145)
T PF12695_consen 80 ARN-PRVKAVVLLSPY 94 (145)
T ss_dssp HHS-TTESEEEEESES
T ss_pred hhc-cceeEEEEecCc
Confidence 998 779999999983
No 49
>TIGR03100 hydr1_PEP hydrolase, ortholog 1, exosortase system type 1 associated. This group of proteins are members of the alpha/beta hydrolase superfamily. These proteins are generally found in genomes containing the exosortase/PEP-CTERM protein expoert system, specifically the type 1 variant of this system described by the Genome Property GenProp0652. When found in this context they are invariably present in the vicinity of a second, relatively unrelated enzyme (ortholog 2, TIGR03101) of the same superfamily.
Probab=99.62 E-value=9.5e-15 Score=96.65 Aligned_cols=94 Identities=12% Similarity=0.069 Sum_probs=71.1
Q ss_pred CEeecCCC----CCHhhHHHHHHhhhC-CceEEEecCCCCCCCccc--hh-hHHHHHHHHHHHh-----CCCCeeEEEEc
Q psy1324 1 MLFLHGFP----ESWYIWKHQMSEFSH-EYWTVAVDIKTNFRTIAD--RY-FLVDSLKVFLDHL-----GRNRCILIGRD 67 (115)
Q Consensus 1 vl~~hG~~----~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s~~~--~~-~~~~~~~~~~~~~-----~~~~~~lvg~S 67 (115)
||++||.+ ++...|..+.+.|.+ +|.++++|+||+|.|+.. .+ .+.+++.+.++.+ +.++++++|||
T Consensus 29 vv~i~gg~~~~~g~~~~~~~la~~l~~~G~~v~~~Dl~G~G~S~~~~~~~~~~~~d~~~~~~~l~~~~~g~~~i~l~G~S 108 (274)
T TIGR03100 29 VLIVVGGPQYRVGSHRQFVLLARRLAEAGFPVLRFDYRGMGDSEGENLGFEGIDADIAAAIDAFREAAPHLRRIVAWGLC 108 (274)
T ss_pred EEEEeCCccccCCchhHHHHHHHHHHHCCCEEEEeCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHhhCCCCCcEEEEEEC
Confidence 47788765 344556777888865 999999999999998322 23 5556666666555 45789999999
Q ss_pred hhHHHHHHHHHhCcccccceEEecCCCC
Q psy1324 68 FGGSLVWSFLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 68 ~Gg~~a~~~~~~~~~~v~~~v~~~~~~~ 95 (115)
+||.+++.++.. +++++++|++++...
T Consensus 109 ~Gg~~a~~~a~~-~~~v~~lil~~p~~~ 135 (274)
T TIGR03100 109 DAASAALLYAPA-DLRVAGLVLLNPWVR 135 (274)
T ss_pred HHHHHHHHHhhh-CCCccEEEEECCccC
Confidence 999999999765 467999999997743
No 50
>PRK10985 putative hydrolase; Provisional
Probab=99.61 E-value=8.6e-15 Score=98.86 Aligned_cols=95 Identities=17% Similarity=0.313 Sum_probs=69.3
Q ss_pred CEeecCCCCCHh--hHHHHHHhhhC-CceEEEecCCCCCCCccc--h-h--hHHHHHHHHH----HHhCCCCeeEEEEch
Q psy1324 1 MLFLHGFPESWY--IWKHQMSEFSH-EYWTVAVDIKTNFRTIAD--R-Y--FLVDSLKVFL----DHLGRNRCILIGRDF 68 (115)
Q Consensus 1 vl~~hG~~~~~~--~~~~~~~~l~~-~~~v~~~d~~g~g~s~~~--~-~--~~~~~~~~~~----~~~~~~~~~lvg~S~ 68 (115)
||++||++++.. .+..+++.+.+ ||.|+++|+||+|.++.. . + ...+++..++ ++.+..+++++||||
T Consensus 61 vll~HG~~g~~~~~~~~~~~~~l~~~G~~v~~~d~rG~g~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~~~~~~~vG~S~ 140 (324)
T PRK10985 61 LVLFHGLEGSFNSPYAHGLLEAAQKRGWLGVVMHFRGCSGEPNRLHRIYHSGETEDARFFLRWLQREFGHVPTAAVGYSL 140 (324)
T ss_pred EEEeCCCCCCCcCHHHHHHHHHHHHCCCEEEEEeCCCCCCCccCCcceECCCchHHHHHHHHHHHHhCCCCCEEEEEecc
Confidence 689999987643 35567777765 999999999999877321 1 2 2233333333 335667899999999
Q ss_pred hHHHHHHHHHhCccc--ccceEEecCCCC
Q psy1324 69 GGSLVWSFLDKYPEL--VVKSIIINVPHP 95 (115)
Q Consensus 69 Gg~~a~~~~~~~~~~--v~~~v~~~~~~~ 95 (115)
||.++..++.++++. +.++++++++..
T Consensus 141 GG~i~~~~~~~~~~~~~~~~~v~i~~p~~ 169 (324)
T PRK10985 141 GGNMLACLLAKEGDDLPLDAAVIVSAPLM 169 (324)
T ss_pred hHHHHHHHHHhhCCCCCccEEEEEcCCCC
Confidence 999988888887644 889999998764
No 51
>cd00707 Pancreat_lipase_like Pancreatic lipase-like enzymes. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=99.61 E-value=6.8e-15 Score=97.47 Aligned_cols=96 Identities=19% Similarity=0.235 Sum_probs=70.4
Q ss_pred CEeecCCCCCH-hhHHHH-HHh-hh-CCceEEEecCCCCCCC--ccch--h-hHHHHHHHHHHHh------CCCCeeEEE
Q psy1324 1 MLFLHGFPESW-YIWKHQ-MSE-FS-HEYWTVAVDIKTNFRT--IADR--Y-FLVDSLKVFLDHL------GRNRCILIG 65 (115)
Q Consensus 1 vl~~hG~~~~~-~~~~~~-~~~-l~-~~~~v~~~d~~g~g~s--~~~~--~-~~~~~~~~~~~~~------~~~~~~lvg 65 (115)
+|++||++++. ..|... .+. +. .+++|+++|+++.+.. +... . ...+++..+++.+ +.++++++|
T Consensus 39 vilIHG~~~~~~~~~~~~l~~~ll~~~~~nVi~vD~~~~~~~~y~~a~~~~~~v~~~la~~l~~L~~~~g~~~~~i~lIG 118 (275)
T cd00707 39 RFIIHGWTSSGEESWISDLRKAYLSRGDYNVIVVDWGRGANPNYPQAVNNTRVVGAELAKFLDFLVDNTGLSLENVHLIG 118 (275)
T ss_pred EEEEcCCCCCCCCcHHHHHHHHHHhcCCCEEEEEECccccccChHHHHHhHHHHHHHHHHHHHHHHHhcCCChHHEEEEE
Confidence 58999999887 566544 333 34 4899999999987433 1111 1 3334444444443 347899999
Q ss_pred EchhHHHHHHHHHhCcccccceEEecCCCCh
Q psy1324 66 RDFGGSLVWSFLDKYPELVVKSIIINVPHPA 96 (115)
Q Consensus 66 ~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~~ 96 (115)
|||||.++..++.++|+++++++.+++..+.
T Consensus 119 hSlGa~vAg~~a~~~~~~v~~iv~LDPa~p~ 149 (275)
T cd00707 119 HSLGAHVAGFAGKRLNGKLGRITGLDPAGPL 149 (275)
T ss_pred ecHHHHHHHHHHHHhcCccceeEEecCCccc
Confidence 9999999999999999999999999987653
No 52
>PF00561 Abhydrolase_1: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR000073 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents fold-1 of alpha/beta hydrolase.; PDB: 2VAT_E 2VAX_C 2VAV_H 2PSJ_A 2PSH_B 2PSE_A 2PSF_A 2PSD_A 2EDA_A 1CIJ_A ....
Probab=99.60 E-value=7.3e-15 Score=93.54 Aligned_cols=69 Identities=28% Similarity=0.470 Sum_probs=63.1
Q ss_pred ceEEEecCCCCCCC-c---cch--h---hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhCcccccceEEecCC
Q psy1324 25 YWTVAVDIKTNFRT-I---ADR--Y---FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVP 93 (115)
Q Consensus 25 ~~v~~~d~~g~g~s-~---~~~--~---~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~ 93 (115)
|+|+++|+||+|.| + ... + +.++++..++++++.++++++||||||.+++.++.++|++|+++++++++
T Consensus 1 f~vi~~d~rG~g~S~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~vG~S~Gg~~~~~~a~~~p~~v~~lvl~~~~ 78 (230)
T PF00561_consen 1 FDVILFDLRGFGYSSPHWDPDFPDYTTDDLAADLEALREALGIKKINLVGHSMGGMLALEYAAQYPERVKKLVLISPP 78 (230)
T ss_dssp EEEEEEECTTSTTSSSCCGSGSCTHCHHHHHHHHHHHHHHHTTSSEEEEEETHHHHHHHHHHHHSGGGEEEEEEESES
T ss_pred CEEEEEeCCCCCCCCCCccCCcccccHHHHHHHHHHHHHHhCCCCeEEEEECCChHHHHHHHHHCchhhcCcEEEeee
Confidence 68999999999999 4 111 3 88999999999999999999999999999999999999999999999987
No 53
>KOG2564|consensus
Probab=99.60 E-value=6.6e-15 Score=96.01 Aligned_cols=93 Identities=23% Similarity=0.356 Sum_probs=76.9
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC--CceEEEecCCCCCCC---ccchh---hHHHHHHHHHHHh-C--CCCeeEEEEchh
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH--EYWTVAVDIKTNFRT---IADRY---FLVDSLKVFLDHL-G--RNRCILIGRDFG 69 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s---~~~~~---~~~~~~~~~~~~~-~--~~~~~lvg~S~G 69 (115)
++++||.+.+.-.|..+..++.. ..+|+++|+||||.+ +++.+ .+.+|+.++++.+ + ..++++||||||
T Consensus 77 l~l~HG~G~S~LSfA~~a~el~s~~~~r~~a~DlRgHGeTk~~~e~dlS~eT~~KD~~~~i~~~fge~~~~iilVGHSmG 156 (343)
T KOG2564|consen 77 LLLLHGGGSSALSFAIFASELKSKIRCRCLALDLRGHGETKVENEDDLSLETMSKDFGAVIKELFGELPPQIILVGHSMG 156 (343)
T ss_pred EEEeecCcccchhHHHHHHHHHhhcceeEEEeeccccCccccCChhhcCHHHHHHHHHHHHHHHhccCCCceEEEecccc
Confidence 47899999999999999999865 677888999999999 33334 8889999999886 2 368999999999
Q ss_pred HHHHHHHHHhC--cccccceEEecCCC
Q psy1324 70 GSLVWSFLDKY--PELVVKSIIINVPH 94 (115)
Q Consensus 70 g~~a~~~~~~~--~~~v~~~v~~~~~~ 94 (115)
|.++.+.+... |. +.+++.++.--
T Consensus 157 GaIav~~a~~k~lps-l~Gl~viDVVE 182 (343)
T KOG2564|consen 157 GAIAVHTAASKTLPS-LAGLVVIDVVE 182 (343)
T ss_pred chhhhhhhhhhhchh-hhceEEEEEec
Confidence 99998887763 55 88888888543
No 54
>TIGR01607 PST-A Plasmodium subtelomeric family (PST-A). These genes are preferentially located in the subtelomeric regions of the chromosomes of both P. falciparum and P. yoelii.
Probab=99.59 E-value=9.3e-15 Score=99.08 Aligned_cols=93 Identities=15% Similarity=0.309 Sum_probs=70.6
Q ss_pred CEeecCCCCCHh-hH-------------------------HHHHHhhhC-CceEEEecCCCCCCCc-c----c---hh-h
Q psy1324 1 MLFLHGFPESWY-IW-------------------------KHQMSEFSH-EYWTVAVDIKTNFRTI-A----D---RY-F 44 (115)
Q Consensus 1 vl~~hG~~~~~~-~~-------------------------~~~~~~l~~-~~~v~~~d~~g~g~s~-~----~---~~-~ 44 (115)
|+++||++.+.. .+ ..+++.|.+ +|.|+++|+||||.|. . . .+ +
T Consensus 24 v~i~HG~~eh~~~~~~~~~~~~~~~~~~~~~~~~ry~~y~~~~~~~l~~~G~~V~~~D~rGHG~S~~~~~~~g~~~~~~~ 103 (332)
T TIGR01607 24 IVLIHGLKSHLRLQFLKINAKIVNNDRAVLIDTDNYYIYKDSWIENFNKNGYSVYGLDLQGHGESDGLQNLRGHINCFDD 103 (332)
T ss_pred EEEECCCchhhhhhhhhcCcccCCCCeeEEEcCCcceEeeHHHHHHHHHCCCcEEEecccccCCCccccccccchhhHHH
Confidence 689999988775 11 467888855 9999999999999882 1 1 13 6
Q ss_pred HHHHHHHHHHHhC------------------------CCCeeEEEEchhHHHHHHHHHhCcc--------cccceEEecC
Q psy1324 45 LVDSLKVFLDHLG------------------------RNRCILIGRDFGGSLVWSFLDKYPE--------LVVKSIIINV 92 (115)
Q Consensus 45 ~~~~~~~~~~~~~------------------------~~~~~lvg~S~Gg~~a~~~~~~~~~--------~v~~~v~~~~ 92 (115)
.++++.++++.+. ..+++++||||||.++..++.++++ .++++|++++
T Consensus 104 ~v~Dl~~~i~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~p~~l~GhSmGg~i~~~~~~~~~~~~~~~~~~~i~g~i~~s~ 183 (332)
T TIGR01607 104 LVYDVIQYMNRINDSIILENETKSDDESYDIVNTKENRLPMYIIGLSMGGNIALRLLELLGKSNENNDKLNIKGCISLSG 183 (332)
T ss_pred HHHHHHHHHHHhhhhhccccccccccccccccccccCCCceeEeeccCccHHHHHHHHHhccccccccccccceEEEecc
Confidence 6677777776531 2478999999999999999876542 5888887776
Q ss_pred C
Q psy1324 93 P 93 (115)
Q Consensus 93 ~ 93 (115)
.
T Consensus 184 ~ 184 (332)
T TIGR01607 184 M 184 (332)
T ss_pred c
Confidence 5
No 55
>COG0596 MhpC Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily) [General function prediction only]
Probab=99.57 E-value=5.6e-14 Score=89.50 Aligned_cols=95 Identities=26% Similarity=0.533 Sum_probs=79.7
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC---CceEEEecCCCCCCCc--cchh-hHHHHHHHHHHHhCCCCeeEEEEchhHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH---EYWTVAVDIKTNFRTI--ADRY-FLVDSLKVFLDHLGRNRCILIGRDFGGSLVW 74 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~---~~~v~~~d~~g~g~s~--~~~~-~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~ 74 (115)
++++||++.+...|......+.. .|+++.+|+||+|.|. .... ..++++..+++.++.++++++|||+||.++.
T Consensus 24 i~~~hg~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~~~~l~G~S~Gg~~~~ 103 (282)
T COG0596 24 LVLLHGFPGSSSVWRPVFKVLPALAARYRVIAPDLRGHGRSDPAGYSLSAYADDLAALLDALGLEKVVLVGHSMGGAVAL 103 (282)
T ss_pred EEEeCCCCCchhhhHHHHHHhhccccceEEEEecccCCCCCCcccccHHHHHHHHHHHHHHhCCCceEEEEecccHHHHH
Confidence 58999999999999884333322 2999999999999984 1222 4588899999999988899999999999999
Q ss_pred HHHHhCcccccceEEecCCCC
Q psy1324 75 SFLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 75 ~~~~~~~~~v~~~v~~~~~~~ 95 (115)
.++.++|+++++++++++...
T Consensus 104 ~~~~~~p~~~~~~v~~~~~~~ 124 (282)
T COG0596 104 ALALRHPDRVRGLVLIGPAPP 124 (282)
T ss_pred HHHHhcchhhheeeEecCCCC
Confidence 999999999999999997754
No 56
>PRK05077 frsA fermentation/respiration switch protein; Reviewed
Probab=99.56 E-value=4.7e-14 Score=98.14 Aligned_cols=94 Identities=11% Similarity=0.062 Sum_probs=70.7
Q ss_pred EeecCCCCC-HhhHHHHHHhhhC-CceEEEecCCCCCCCcc----chh-hHHHHHHHHHHHh---CCCCeeEEEEchhHH
Q psy1324 2 LFLHGFPES-WYIWKHQMSEFSH-EYWTVAVDIKTNFRTIA----DRY-FLVDSLKVFLDHL---GRNRCILIGRDFGGS 71 (115)
Q Consensus 2 l~~hG~~~~-~~~~~~~~~~l~~-~~~v~~~d~~g~g~s~~----~~~-~~~~~~~~~~~~~---~~~~~~lvg~S~Gg~ 71 (115)
|+.||+.+. .+.|..+.+.+.+ ||.|+++|+||+|.|.. ... .....+.+.+... +.+++.++|||+||.
T Consensus 198 li~gG~~~~~~~~~~~~~~~La~~Gy~vl~~D~pG~G~s~~~~~~~d~~~~~~avld~l~~~~~vd~~ri~l~G~S~GG~ 277 (414)
T PRK05077 198 LVCGGLDSLQTDYYRLFRDYLAPRGIAMLTIDMPSVGFSSKWKLTQDSSLLHQAVLNALPNVPWVDHTRVAAFGFRFGAN 277 (414)
T ss_pred EEeCCcccchhhhHHHHHHHHHhCCCEEEEECCCCCCCCCCCCccccHHHHHHHHHHHHHhCcccCcccEEEEEEChHHH
Confidence 445555554 3568888888865 99999999999998821 112 3334455555444 457899999999999
Q ss_pred HHHHHHHhCcccccceEEecCCCC
Q psy1324 72 LVWSFLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 72 ~a~~~~~~~~~~v~~~v~~~~~~~ 95 (115)
+++.++..+|++++++|+++++..
T Consensus 278 ~Al~~A~~~p~ri~a~V~~~~~~~ 301 (414)
T PRK05077 278 VAVRLAYLEPPRLKAVACLGPVVH 301 (414)
T ss_pred HHHHHHHhCCcCceEEEEECCccc
Confidence 999999999999999999988754
No 57
>KOG2382|consensus
Probab=99.56 E-value=3e-14 Score=94.62 Aligned_cols=94 Identities=23% Similarity=0.429 Sum_probs=83.4
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC--CceEEEecCCCCCCCccch---h-hHHHHHHHHHHHhC----CCCeeEEEEchhH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH--EYWTVAVDIKTNFRTIADR---Y-FLVDSLKVFLDHLG----RNRCILIGRDFGG 70 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~---~-~~~~~~~~~~~~~~----~~~~~lvg~S~Gg 70 (115)
++++||..++...|+.+...|++ +-.++++|.|.||.||... + .+++++..+++..+ ..+++++||||||
T Consensus 55 ~i~lHGl~GS~~Nw~sv~k~Ls~~l~~~v~~vd~RnHG~Sp~~~~h~~~~ma~dv~~Fi~~v~~~~~~~~~~l~GHsmGG 134 (315)
T KOG2382|consen 55 AIILHGLLGSKENWRSVAKNLSRKLGRDVYAVDVRNHGSSPKITVHNYEAMAEDVKLFIDGVGGSTRLDPVVLLGHSMGG 134 (315)
T ss_pred eEEecccccCCCCHHHHHHHhcccccCceEEEecccCCCCccccccCHHHHHHHHHHHHHHcccccccCCceecccCcch
Confidence 47899999999999999999976 7899999999999994433 5 99999999999885 5699999999999
Q ss_pred -HHHHHHHHhCcccccceEEecCCC
Q psy1324 71 -SLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 71 -~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
.+++....+.|.++.+++.++-.+
T Consensus 135 ~~~~m~~t~~~p~~~~rliv~D~sP 159 (315)
T KOG2382|consen 135 VKVAMAETLKKPDLIERLIVEDISP 159 (315)
T ss_pred HHHHHHHHHhcCcccceeEEEecCC
Confidence 888888889999999999998665
No 58
>PRK10566 esterase; Provisional
Probab=99.55 E-value=7.5e-14 Score=90.73 Aligned_cols=92 Identities=14% Similarity=0.266 Sum_probs=67.6
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCCCCC-ccc---h----h----hHHHHHHHHHHHh------CCCCe
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFRT-IAD---R----Y----FLVDSLKVFLDHL------GRNRC 61 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s-~~~---~----~----~~~~~~~~~~~~~------~~~~~ 61 (115)
||++||++++...|..+.+.+.+ +|.|+++|+||+|.+ ... . + ...+++.+.++.+ +.+++
T Consensus 30 vv~~HG~~~~~~~~~~~~~~l~~~G~~v~~~d~~g~G~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~i 109 (249)
T PRK10566 30 VFFYHGFTSSKLVYSYFAVALAQAGFRVIMPDAPMHGARFSGDEARRLNHFWQILLQNMQEFPTLRAAIREEGWLLDDRL 109 (249)
T ss_pred EEEeCCCCcccchHHHHHHHHHhCCCEEEEecCCcccccCCCccccchhhHHHHHHHHHHHHHHHHHHHHhcCCcCccce
Confidence 68999999999889999898876 999999999999865 111 1 1 1233333333332 34689
Q ss_pred eEEEEchhHHHHHHHHHhCcccccceEEecC
Q psy1324 62 ILIGRDFGGSLVWSFLDKYPELVVKSIIINV 92 (115)
Q Consensus 62 ~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~ 92 (115)
.++|||+||.+++.++.++|+....++++++
T Consensus 110 ~v~G~S~Gg~~al~~~~~~~~~~~~~~~~~~ 140 (249)
T PRK10566 110 AVGGASMGGMTALGIMARHPWVKCVASLMGS 140 (249)
T ss_pred eEEeecccHHHHHHHHHhCCCeeEEEEeeCc
Confidence 9999999999999999998875555555543
No 59
>TIGR01836 PHA_synth_III_C poly(R)-hydroxyalkanoic acid synthase, class III, PhaC subunit. This model represents the PhaC subunit of a heterodimeric form of polyhydroxyalkanoic acid (PHA) synthase. Excepting the PhaC of Bacillus megaterium (which needs PhaR), all members require PhaE (TIGR01834) for activity and are designated class III. This enzyme builds ester polymers for carbon and energy storage that accumulate in inclusions, and both this enzyme and the depolymerase associate with the inclusions. Class III enzymes polymerize short-chain-length hydroxyalkanoates.
Probab=99.54 E-value=3.3e-14 Score=96.92 Aligned_cols=95 Identities=13% Similarity=0.150 Sum_probs=72.6
Q ss_pred CEeecCCCCCHhhH-----HHHHHhhhC-CceEEEecCCCCCCCc-cch---h--h-HHHHHHHHHHHhCCCCeeEEEEc
Q psy1324 1 MLFLHGFPESWYIW-----KHQMSEFSH-EYWTVAVDIKTNFRTI-ADR---Y--F-LVDSLKVFLDHLGRNRCILIGRD 67 (115)
Q Consensus 1 vl~~hG~~~~~~~~-----~~~~~~l~~-~~~v~~~d~~g~g~s~-~~~---~--~-~~~~~~~~~~~~~~~~~~lvg~S 67 (115)
||++||.......+ +.+++.|.+ ||+|+++|++|+|.+. ... | + ..+.+..+.+..+.++++++|||
T Consensus 65 vl~v~~~~~~~~~~d~~~~~~~~~~L~~~G~~V~~~D~~g~g~s~~~~~~~d~~~~~~~~~v~~l~~~~~~~~i~lvGhS 144 (350)
T TIGR01836 65 LLIVYALVNRPYMLDLQEDRSLVRGLLERGQDVYLIDWGYPDRADRYLTLDDYINGYIDKCVDYICRTSKLDQISLLGIC 144 (350)
T ss_pred EEEeccccccceeccCCCCchHHHHHHHCCCeEEEEeCCCCCHHHhcCCHHHHHHHHHHHHHHHHHHHhCCCcccEEEEC
Confidence 57888876544443 578888865 9999999999988761 111 2 2 23334455556677899999999
Q ss_pred hhHHHHHHHHHhCcccccceEEecCCCC
Q psy1324 68 FGGSLVWSFLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 68 ~Gg~~a~~~~~~~~~~v~~~v~~~~~~~ 95 (115)
|||.++..++.++|++++++++++++..
T Consensus 145 ~GG~i~~~~~~~~~~~v~~lv~~~~p~~ 172 (350)
T TIGR01836 145 QGGTFSLCYAALYPDKIKNLVTMVTPVD 172 (350)
T ss_pred HHHHHHHHHHHhCchheeeEEEeccccc
Confidence 9999999999999999999999997653
No 60
>PRK13604 luxD acyl transferase; Provisional
Probab=99.51 E-value=2.8e-13 Score=90.39 Aligned_cols=93 Identities=12% Similarity=0.086 Sum_probs=69.9
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCC-CCCccc--h--h----hHHHHHHHHHHHhCCCCeeEEEEchhH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTN-FRTIAD--R--Y----FLVDSLKVFLDHLGRNRCILIGRDFGG 70 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~-g~s~~~--~--~----~~~~~~~~~~~~~~~~~~~lvg~S~Gg 70 (115)
||+.||++.....+..+++.|.+ ||.|+.+|.+|+ |.|..+ . + ..+..+.+++++.+.+++.++||||||
T Consensus 40 vIi~HGf~~~~~~~~~~A~~La~~G~~vLrfD~rg~~GeS~G~~~~~t~s~g~~Dl~aaid~lk~~~~~~I~LiG~SmGg 119 (307)
T PRK13604 40 ILIASGFARRMDHFAGLAEYLSSNGFHVIRYDSLHHVGLSSGTIDEFTMSIGKNSLLTVVDWLNTRGINNLGLIAASLSA 119 (307)
T ss_pred EEEeCCCCCChHHHHHHHHHHHHCCCEEEEecCCCCCCCCCCccccCcccccHHHHHHHHHHHHhcCCCceEEEEECHHH
Confidence 58899999988889999999976 999999999887 887211 1 1 344444555555556789999999999
Q ss_pred HHHHHHHHhCcccccceEEecCCCC
Q psy1324 71 SLVWSFLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 71 ~~a~~~~~~~~~~v~~~v~~~~~~~ 95 (115)
.++...+.+. .++++|+.+|...
T Consensus 120 ava~~~A~~~--~v~~lI~~sp~~~ 142 (307)
T PRK13604 120 RIAYEVINEI--DLSFLITAVGVVN 142 (307)
T ss_pred HHHHHHhcCC--CCCEEEEcCCccc
Confidence 9987776643 3787777776654
No 61
>PF00975 Thioesterase: Thioesterase domain; InterPro: IPR001031 Thioesterase domains often occur integrated in or associated with peptide synthetases which are involved in the non-ribosomal synthesis of peptide antibiotics []. Thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates.; GO: 0016788 hydrolase activity, acting on ester bonds, 0009058 biosynthetic process; PDB: 2RON_A 2K2Q_B 3LCR_B 2HFJ_B 1MNQ_A 1MN6_B 1MNA_B 2HFK_B 2H7Y_B 2H7X_A ....
Probab=99.49 E-value=1e-12 Score=84.49 Aligned_cols=96 Identities=16% Similarity=0.209 Sum_probs=78.8
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCC-ceEEEecCCCCCCC--ccchh-hHHHHHHHHHHHhCCC-CeeEEEEchhHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHE-YWTVAVDIKTNFRT--IADRY-FLVDSLKVFLDHLGRN-RCILIGRDFGGSLVWS 75 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~-~~v~~~d~~g~g~s--~~~~~-~~~~~~~~~~~~~~~~-~~~lvg~S~Gg~~a~~ 75 (115)
|+++|+.+++...|.++.+.+.+. +.|+.++.+|.+.. +.... ++++...+.+.....+ ++.++|||+||.+|..
T Consensus 3 lf~~p~~gG~~~~y~~la~~l~~~~~~v~~i~~~~~~~~~~~~~si~~la~~y~~~I~~~~~~gp~~L~G~S~Gg~lA~E 82 (229)
T PF00975_consen 3 LFCFPPAGGSASSYRPLARALPDDVIGVYGIEYPGRGDDEPPPDSIEELASRYAEAIRARQPEGPYVLAGWSFGGILAFE 82 (229)
T ss_dssp EEEESSTTCSGGGGHHHHHHHTTTEEEEEEECSTTSCTTSHEESSHHHHHHHHHHHHHHHTSSSSEEEEEETHHHHHHHH
T ss_pred EEEEcCCccCHHHHHHHHHhCCCCeEEEEEEecCCCCCCCCCCCCHHHHHHHHHHHhhhhCCCCCeeehccCccHHHHHH
Confidence 589999999999999999999986 99999999999744 22224 7777777777666544 9999999999999999
Q ss_pred HHHhCc---ccccceEEecCCCCh
Q psy1324 76 FLDKYP---ELVVKSIIINVPHPA 96 (115)
Q Consensus 76 ~~~~~~---~~v~~~v~~~~~~~~ 96 (115)
.|.+.. ..+..+++++++++.
T Consensus 83 ~A~~Le~~G~~v~~l~liD~~~p~ 106 (229)
T PF00975_consen 83 MARQLEEAGEEVSRLILIDSPPPS 106 (229)
T ss_dssp HHHHHHHTT-SESEEEEESCSSTT
T ss_pred HHHHHHHhhhccCceEEecCCCCC
Confidence 998853 458899999977664
No 62
>PF06342 DUF1057: Alpha/beta hydrolase of unknown function (DUF1057); InterPro: IPR010463 This entry consists of proteins of unknown function which have an alpha/beta hydrolase fold.
Probab=99.48 E-value=4.7e-13 Score=87.66 Aligned_cols=92 Identities=21% Similarity=0.269 Sum_probs=80.4
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCCCCC--ccch-h---hHHHHHHHHHHHhCC-CCeeEEEEchhHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFRT--IADR-Y---FLVDSLKVFLDHLGR-NRCILIGRDFGGSL 72 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s--~~~~-~---~~~~~~~~~~~~~~~-~~~~lvg~S~Gg~~ 72 (115)
||-+||.+++..+|+.+...|.+ +.+++.+++||+|.+ +.+. | +....+.+++++++. +++..+|||.|+-.
T Consensus 38 Vv~~hGsPGSH~DFkYi~~~l~~~~iR~I~iN~PGf~~t~~~~~~~~~n~er~~~~~~ll~~l~i~~~~i~~gHSrGcen 117 (297)
T PF06342_consen 38 VVAFHGSPGSHNDFKYIRPPLDEAGIRFIGINYPGFGFTPGYPDQQYTNEERQNFVNALLDELGIKGKLIFLGHSRGCEN 117 (297)
T ss_pred EEEecCCCCCccchhhhhhHHHHcCeEEEEeCCCCCCCCCCCcccccChHHHHHHHHHHHHHcCCCCceEEEEeccchHH
Confidence 46799999999999999999977 999999999999999 2222 4 788888999999987 47788999999999
Q ss_pred HHHHHHhCcccccceEEecCCC
Q psy1324 73 VWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 73 a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
|+.++..+| ..++++++++.
T Consensus 118 al~la~~~~--~~g~~lin~~G 137 (297)
T PF06342_consen 118 ALQLAVTHP--LHGLVLINPPG 137 (297)
T ss_pred HHHHHhcCc--cceEEEecCCc
Confidence 999999984 67999999775
No 63
>PLN00021 chlorophyllase
Probab=99.47 E-value=5.1e-13 Score=89.95 Aligned_cols=94 Identities=17% Similarity=0.184 Sum_probs=69.2
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCCCCC-ccchh----hHHHHHHHHHHH-------hCCCCeeEEEEc
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFRT-IADRY----FLVDSLKVFLDH-------LGRNRCILIGRD 67 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s-~~~~~----~~~~~~~~~~~~-------~~~~~~~lvg~S 67 (115)
||++||++.+...|..+.+.+++ +|.|+++|+++++.. ..... +..+.+.+.++. .+.+++.++|||
T Consensus 55 Vv~lHG~~~~~~~y~~l~~~Las~G~~VvapD~~g~~~~~~~~~i~d~~~~~~~l~~~l~~~l~~~~~~d~~~v~l~GHS 134 (313)
T PLN00021 55 LLFLHGYLLYNSFYSQLLQHIASHGFIVVAPQLYTLAGPDGTDEIKDAAAVINWLSSGLAAVLPEGVRPDLSKLALAGHS 134 (313)
T ss_pred EEEECCCCCCcccHHHHHHHHHhCCCEEEEecCCCcCCCCchhhHHHHHHHHHHHHhhhhhhcccccccChhheEEEEEC
Confidence 58999999999999999999976 899999999987543 11111 222222222222 234689999999
Q ss_pred hhHHHHHHHHHhCcc-----cccceEEecCCC
Q psy1324 68 FGGSLVWSFLDKYPE-----LVVKSIIINVPH 94 (115)
Q Consensus 68 ~Gg~~a~~~~~~~~~-----~v~~~v~~~~~~ 94 (115)
+||.+++.++.++++ ++.+++.+++..
T Consensus 135 ~GG~iA~~lA~~~~~~~~~~~v~ali~ldPv~ 166 (313)
T PLN00021 135 RGGKTAFALALGKAAVSLPLKFSALIGLDPVD 166 (313)
T ss_pred cchHHHHHHHhhccccccccceeeEEeecccc
Confidence 999999999999874 578888888743
No 64
>TIGR01840 esterase_phb esterase, PHB depolymerase family. This model describes a subfamily among lipases of the ab-hydrolase family. This subfamily includes bacterial depolymerases for poly(3-hydroxybutyrate) (PHB) and related polyhydroxyalkanoates (PHA), as well as acetyl xylan esterases, feruloyl esterases, and others from fungi.
Probab=99.45 E-value=1e-12 Score=83.95 Aligned_cols=95 Identities=19% Similarity=0.177 Sum_probs=66.7
Q ss_pred CEeecCCCCCHhhHH---HHHHhhhC-CceEEEecCCCCCCC--------ccc--hh-hHHHHHHHHHH----HhC--CC
Q psy1324 1 MLFLHGFPESWYIWK---HQMSEFSH-EYWTVAVDIKTNFRT--------IAD--RY-FLVDSLKVFLD----HLG--RN 59 (115)
Q Consensus 1 vl~~hG~~~~~~~~~---~~~~~l~~-~~~v~~~d~~g~g~s--------~~~--~~-~~~~~~~~~~~----~~~--~~ 59 (115)
||++||.+.+...+. .+...+.+ ++.|+++|.+|++.+ +.. .. ....++.++++ +.+ .+
T Consensus 16 vv~lHG~~~~~~~~~~~~~~~~~a~~~g~~Vv~Pd~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~i~~~~~~~~id~~ 95 (212)
T TIGR01840 16 VLALHGCGQTASAYVIDWGWKAAADRYGFVLVAPEQTSYNSSNNCWDWFFTHHRARGTGEVESLHQLIDAVKANYSIDPN 95 (212)
T ss_pred EEEeCCCCCCHHHHhhhcChHHHHHhCCeEEEecCCcCccccCCCCCCCCccccCCCCccHHHHHHHHHHHHHhcCcChh
Confidence 689999998887775 23344443 899999999987533 110 00 11222333332 322 35
Q ss_pred CeeEEEEchhHHHHHHHHHhCcccccceEEecCCCC
Q psy1324 60 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 60 ~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~ 95 (115)
+++++|||+||.+++.++.++|+.+.+++.+++...
T Consensus 96 ~i~l~G~S~Gg~~a~~~a~~~p~~~~~~~~~~g~~~ 131 (212)
T TIGR01840 96 RVYVTGLSAGGGMTAVLGCTYPDVFAGGASNAGLPY 131 (212)
T ss_pred heEEEEECHHHHHHHHHHHhCchhheEEEeecCCcc
Confidence 899999999999999999999999999988887753
No 65
>KOG2984|consensus
Probab=99.45 E-value=6.7e-14 Score=87.78 Aligned_cols=95 Identities=17% Similarity=0.079 Sum_probs=82.2
Q ss_pred CEeecCCC-CCHhhHHHHHHhhhC--CceEEEecCCCCCCC-ccch-h------hHHHHHHHHHHHhCCCCeeEEEEchh
Q psy1324 1 MLFLHGFP-ESWYIWKHQMSEFSH--EYWTVAVDIKTNFRT-IADR-Y------FLVDSLKVFLDHLGRNRCILIGRDFG 69 (115)
Q Consensus 1 vl~~hG~~-~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s-~~~~-~------~~~~~~~~~~~~~~~~~~~lvg~S~G 69 (115)
|++++|.. +...+|.+....+.+ -++++++|.||+|.| |.+. | +.+++...+++.+..+++.++|+|=|
T Consensus 45 iLlipGalGs~~tDf~pql~~l~k~l~~TivawDPpGYG~SrPP~Rkf~~~ff~~Da~~avdLM~aLk~~~fsvlGWSdG 124 (277)
T KOG2984|consen 45 ILLIPGALGSYKTDFPPQLLSLFKPLQVTIVAWDPPGYGTSRPPERKFEVQFFMKDAEYAVDLMEALKLEPFSVLGWSDG 124 (277)
T ss_pred eEecccccccccccCCHHHHhcCCCCceEEEEECCCCCCCCCCCcccchHHHHHHhHHHHHHHHHHhCCCCeeEeeecCC
Confidence 57888885 456789988887754 599999999999999 4443 3 77888899999999999999999999
Q ss_pred HHHHHHHHHhCcccccceEEecCCCC
Q psy1324 70 GSLVWSFLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 70 g~~a~~~~~~~~~~v~~~v~~~~~~~ 95 (115)
|..++..|.++++.|.+++++++..-
T Consensus 125 giTalivAak~~e~v~rmiiwga~ay 150 (277)
T KOG2984|consen 125 GITALIVAAKGKEKVNRMIIWGAAAY 150 (277)
T ss_pred CeEEEEeeccChhhhhhheeecccce
Confidence 99999999999999999999997754
No 66
>PRK06765 homoserine O-acetyltransferase; Provisional
Probab=99.43 E-value=1.2e-12 Score=90.44 Aligned_cols=96 Identities=20% Similarity=0.355 Sum_probs=75.0
Q ss_pred CEeecCCCCCHhh-------------HHHHHHh---hh-CCceEEEecCCCCCCC--------------cc-----c-hh
Q psy1324 1 MLFLHGFPESWYI-------------WKHQMSE---FS-HEYWTVAVDIKTNFRT--------------IA-----D-RY 43 (115)
Q Consensus 1 vl~~hG~~~~~~~-------------~~~~~~~---l~-~~~~v~~~d~~g~g~s--------------~~-----~-~~ 43 (115)
||+.|+++++... |+.++-. +. +.|-|+++|..|-+.| |. . .|
T Consensus 59 vlv~h~~tg~~h~~~~~~~~~~~~gww~~~iG~g~~lDt~~yfvi~~n~lG~~~~~~p~~g~tgp~s~~p~tg~~~~~~f 138 (389)
T PRK06765 59 ILITHYFSATSHAAGKYTADDEESGYWDGLIGPGKAIDTNKYFVISTDTLCNVQVKDPNVITTGPASINPKTGKPYGMDF 138 (389)
T ss_pred EEEeCCCCCchhhcccccccCCCcccHHhccCCCCCcCCCceEEEEecccCCCcCCCCCCCCCCCCCCCcCCCCccCCCC
Confidence 5788999886432 6655442 32 3799999999976431 11 0 12
Q ss_pred ------hHHHHHHHHHHHhCCCCee-EEEEchhHHHHHHHHHhCcccccceEEecCCCCh
Q psy1324 44 ------FLVDSLKVFLDHLGRNRCI-LIGRDFGGSLVWSFLDKYPELVVKSIIINVPHPA 96 (115)
Q Consensus 44 ------~~~~~~~~~~~~~~~~~~~-lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~~ 96 (115)
++++++..++++++.+++. ++||||||++++.++.++|++++++|++++....
T Consensus 139 P~~t~~d~~~~~~~ll~~lgi~~~~~vvG~SmGG~ial~~a~~~P~~v~~lv~ia~~~~~ 198 (389)
T PRK06765 139 PVVTILDFVRVQKELIKSLGIARLHAVMGPSMGGMQAQEWAVHYPHMVERMIGVIGNPQN 198 (389)
T ss_pred CcCcHHHHHHHHHHHHHHcCCCCceEEEEECHHHHHHHHHHHHChHhhheEEEEecCCCC
Confidence 7888999999999999986 9999999999999999999999999999876543
No 67
>TIGR01838 PHA_synth_I poly(R)-hydroxyalkanoic acid synthase, class I. This model represents the class I subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs with three to five carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=99.42 E-value=1.2e-12 Score=93.21 Aligned_cols=95 Identities=13% Similarity=0.178 Sum_probs=74.4
Q ss_pred CEeecCCCCCHhhHH-----HHHHhhhC-CceEEEecCCCCCCC-c---cchh---hHHHHHHHHHHHhCCCCeeEEEEc
Q psy1324 1 MLFLHGFPESWYIWK-----HQMSEFSH-EYWTVAVDIKTNFRT-I---ADRY---FLVDSLKVFLDHLGRNRCILIGRD 67 (115)
Q Consensus 1 vl~~hG~~~~~~~~~-----~~~~~l~~-~~~v~~~d~~g~g~s-~---~~~~---~~~~~~~~~~~~~~~~~~~lvg~S 67 (115)
||++|++....+.|+ .+++.|.+ ||+|+++|++|+|.+ . .+.| ...+.+..+++..+.++++++|||
T Consensus 191 lLiVp~~i~k~yilDL~p~~Slv~~L~~qGf~V~~iDwrgpg~s~~~~~~ddY~~~~i~~al~~v~~~~g~~kv~lvG~c 270 (532)
T TIGR01838 191 LLIVPPWINKYYILDLRPQNSLVRWLVEQGHTVFVISWRNPDASQADKTFDDYIRDGVIAALEVVEAITGEKQVNCVGYC 270 (532)
T ss_pred EEEECcccccceeeecccchHHHHHHHHCCcEEEEEECCCCCcccccCChhhhHHHHHHHHHHHHHHhcCCCCeEEEEEC
Confidence 689999987777775 68888864 999999999999987 1 2224 456667777777788999999999
Q ss_pred hhHHHHH----HHHHhC-cccccceEEecCCCC
Q psy1324 68 FGGSLVW----SFLDKY-PELVVKSIIINVPHP 95 (115)
Q Consensus 68 ~Gg~~a~----~~~~~~-~~~v~~~v~~~~~~~ 95 (115)
+||.++. .++... +++++++++++++..
T Consensus 271 mGGtl~a~ala~~aa~~~~~rv~slvll~t~~D 303 (532)
T TIGR01838 271 IGGTLLSTALAYLAARGDDKRIKSATFFTTLLD 303 (532)
T ss_pred cCcHHHHHHHHHHHHhCCCCccceEEEEecCcC
Confidence 9999852 244554 788999999998764
No 68
>TIGR02821 fghA_ester_D S-formylglutathione hydrolase. This model describes a protein family from bacteria, yeast, and human, with a conserved critical role in formaldehyde detoxification as S-formylglutathione hydrolase (EC 3.1.2.12). Members in eukaryotes such as the human protein are better known as esterase D (EC 3.1.1.1), an enzyme with broad specificity, although S-formylglutathione hydrolase has now been demonstrated as well.
Probab=99.38 E-value=7.9e-12 Score=82.80 Aligned_cols=94 Identities=17% Similarity=0.184 Sum_probs=68.2
Q ss_pred CEeecCCCCCHhhHHHH--HHhhh-C-CceEEEecCC--CCCCCc---------------------cc-hh----hHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQ--MSEFS-H-EYWTVAVDIK--TNFRTI---------------------AD-RY----FLVDS 48 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~--~~~l~-~-~~~v~~~d~~--g~g~s~---------------------~~-~~----~~~~~ 48 (115)
|+++||.+++.+.|... ...+. + ++.|++||.+ |.+.+. .. .+ ...++
T Consensus 45 vvllHG~~~~~~~~~~~~~~~~la~~~g~~Vv~Pd~~~~g~~~~~~~~~w~~g~~~~~~~d~~~~~~~~~~~~~~~~~~~ 124 (275)
T TIGR02821 45 LWYLSGLTCTHENFMIKAGAQRFAAEHGLALVAPDTSPRGTGIAGEDDAWDFGKGAGFYVDATEEPWSQHYRMYSYIVQE 124 (275)
T ss_pred EEEccCCCCCccHHHhhhHHHHHHhhcCcEEEEeCCCCCcCCCCCCcccccccCCccccccCCcCcccccchHHHHHHHH
Confidence 68999999998888543 23443 3 8999999974 333210 00 11 23456
Q ss_pred HHHHHHH---hCCCCeeEEEEchhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 49 LKVFLDH---LGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 49 ~~~~~~~---~~~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
+..++++ ++.+++.++||||||.+++.++.++|+.+++++.+++..
T Consensus 125 l~~~~~~~~~~~~~~~~~~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 173 (275)
T TIGR02821 125 LPALVAAQFPLDGERQGITGHSMGGHGALVIALKNPDRFKSVSAFAPIV 173 (275)
T ss_pred HHHHHHhhCCCCCCceEEEEEChhHHHHHHHHHhCcccceEEEEECCcc
Confidence 6666665 345689999999999999999999999999999887663
No 69
>PF07819 PGAP1: PGAP1-like protein; InterPro: IPR012908 The sequences found in this family are similar to PGAP1 (Q765A7 from SWISSPROT). This is an endoplasmic reticulum membrane protein with a catalytic serine-containing motif that is conserved in a number of lipases. PGAP1 functions as a GPI inositol-deacylase; this deacylation is important for the efficient transport of GPI-anchored proteins from the endoplasmic reticulum to the Golgi body [].; GO: 0016788 hydrolase activity, acting on ester bonds, 0006505 GPI anchor metabolic process, 0006886 intracellular protein transport, 0031227 intrinsic to endoplasmic reticulum membrane
Probab=99.37 E-value=1.2e-11 Score=79.91 Aligned_cols=97 Identities=25% Similarity=0.395 Sum_probs=67.3
Q ss_pred CEeecCCCCCHhhHHHHHHhhh---------CCceEEEecCCCCCCC-ccchh-----hHHHHHHHHHHHh-----CCCC
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFS---------HEYWTVAVDIKTNFRT-IADRY-----FLVDSLKVFLDHL-----GRNR 60 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~---------~~~~v~~~d~~g~g~s-~~~~~-----~~~~~~~~~~~~~-----~~~~ 60 (115)
|||+||..++...++.+..... ..++++++|+...... ..... ...+.+..+++.. +.++
T Consensus 7 VlFIhG~~Gs~~q~rsl~~~~~~~~~~~~~~~~~d~ft~df~~~~s~~~g~~l~~q~~~~~~~i~~i~~~~~~~~~~~~~ 86 (225)
T PF07819_consen 7 VLFIHGNAGSYKQVRSLASELQRKALLNDNSSHFDFFTVDFNEELSAFHGRTLQRQAEFLAEAIKYILELYKSNRPPPRS 86 (225)
T ss_pred EEEECcCCCCHhHHHHHHHHHhhhhhhccCccceeEEEeccCccccccccccHHHHHHHHHHHHHHHHHhhhhccCCCCc
Confidence 6999999999888877765441 1588899987765322 11111 2233333444444 4579
Q ss_pred eeEEEEchhHHHHHHHHHhCc---ccccceEEecCCCChh
Q psy1324 61 CILIGRDFGGSLVWSFLDKYP---ELVVKSIIINVPHPAV 97 (115)
Q Consensus 61 ~~lvg~S~Gg~~a~~~~~~~~---~~v~~~v~~~~~~~~~ 97 (115)
++++||||||.++..++...+ +.++.+|.+++|+...
T Consensus 87 vilVgHSmGGlvar~~l~~~~~~~~~v~~iitl~tPh~g~ 126 (225)
T PF07819_consen 87 VILVGHSMGGLVARSALSLPNYDPDSVKTIITLGTPHRGS 126 (225)
T ss_pred eEEEEEchhhHHHHHHHhccccccccEEEEEEEcCCCCCc
Confidence 999999999999999887654 4799999999887543
No 70
>TIGR03502 lipase_Pla1_cef extracellular lipase, Pla-1/cef family. Members of this protein family are bacterial lipoproteins largely from the Gammaproteobacteria. Characterized members are expressed in extracellularly and have esterase activity. Members include the lipase Pla-1 from Aeromonas hydrophila (AF092033) and CHO cell elongation factor (cef) from Vibrio hollisae
Probab=99.36 E-value=7.2e-12 Score=92.27 Aligned_cols=80 Identities=16% Similarity=0.150 Sum_probs=64.2
Q ss_pred CEeecCCCCCHhhHHHHHHhhh-CCceEEEecCCCCCCC-cc--------------------------chh-hHHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFS-HEYWTVAVDIKTNFRT-IA--------------------------DRY-FLVDSLKV 51 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~-~~~~v~~~d~~g~g~s-~~--------------------------~~~-~~~~~~~~ 51 (115)
||++||++++...|..+.+.|. ++|.|+++|+||||.+ .. +.+ +.+.++..
T Consensus 452 VVllHG~~g~~~~~~~lA~~La~~Gy~VIaiDlpGHG~S~~~~~~~~~~a~~~~~~~y~Nl~~l~~aRDn~rQ~v~Dll~ 531 (792)
T TIGR03502 452 VIYQHGITGAKENALAFAGTLAAAGVATIAIDHPLHGARSFDANASGVNATNANVLAYMNLASLLVARDNLRQSILDLLG 531 (792)
T ss_pred EEEeCCCCCCHHHHHHHHHHHHhCCcEEEEeCCCCCCccccccccccccccccCccceeccccccccccCHHHHHHHHHH
Confidence 5899999999999999999997 4999999999999988 21 012 44555555
Q ss_pred HHHHhC----------------CCCeeEEEEchhHHHHHHHHHhC
Q psy1324 52 FLDHLG----------------RNRCILIGRDFGGSLVWSFLDKY 80 (115)
Q Consensus 52 ~~~~~~----------------~~~~~lvg~S~Gg~~a~~~~~~~ 80 (115)
++..+. ..+++++||||||.++..++...
T Consensus 532 L~~~l~~~~~~~~~~~~~~~~~~~~V~~lGHSLGgiig~~~~~~a 576 (792)
T TIGR03502 532 LRLSLNGSALAGAPLSGINVIDGSKVSFLGHSLGGIVGTSFIAYA 576 (792)
T ss_pred HHHHHhcccccccccccccCCCCCcEEEEecCHHHHHHHHHHHhc
Confidence 555554 34899999999999999999864
No 71
>PLN02872 triacylglycerol lipase
Probab=99.33 E-value=1.6e-12 Score=89.98 Aligned_cols=93 Identities=13% Similarity=0.193 Sum_probs=68.1
Q ss_pred CEeecCCCCCHhhHH------HHHHhhhC-CceEEEecCCCCCCC-------ccch----h---hHH-HHHHHHHHHh--
Q psy1324 1 MLFLHGFPESWYIWK------HQMSEFSH-EYWTVAVDIKTNFRT-------IADR----Y---FLV-DSLKVFLDHL-- 56 (115)
Q Consensus 1 vl~~hG~~~~~~~~~------~~~~~l~~-~~~v~~~d~~g~g~s-------~~~~----~---~~~-~~~~~~~~~~-- 56 (115)
|+++||++.+...|. .+...|++ ||+|+.+|.||++.+ +.+. | +++ .|+.++++.+
T Consensus 77 Vll~HGl~~ss~~w~~~~~~~sla~~La~~GydV~l~n~RG~~~s~gh~~~~~~~~~fw~~s~~e~a~~Dl~a~id~i~~ 156 (395)
T PLN02872 77 VLLQHGLFMAGDAWFLNSPEQSLGFILADHGFDVWVGNVRGTRWSYGHVTLSEKDKEFWDWSWQELALYDLAEMIHYVYS 156 (395)
T ss_pred EEEeCcccccccceeecCcccchHHHHHhCCCCcccccccccccccCCCCCCccchhccCCcHHHHHHHHHHHHHHHHHh
Confidence 689999998888873 34445655 999999999997643 1111 2 444 6778888775
Q ss_pred -CCCCeeEEEEchhHHHHHHHHHhCcc---cccceEEecCCC
Q psy1324 57 -GRNRCILIGRDFGGSLVWSFLDKYPE---LVVKSIIINVPH 94 (115)
Q Consensus 57 -~~~~~~lvg~S~Gg~~a~~~~~~~~~---~v~~~v~~~~~~ 94 (115)
..++++++|||+||.+++.++ .+|+ +++.++.+++..
T Consensus 157 ~~~~~v~~VGhS~Gg~~~~~~~-~~p~~~~~v~~~~~l~P~~ 197 (395)
T PLN02872 157 ITNSKIFIVGHSQGTIMSLAAL-TQPNVVEMVEAAALLCPIS 197 (395)
T ss_pred ccCCceEEEEECHHHHHHHHHh-hChHHHHHHHHHHHhcchh
Confidence 347999999999999998655 5675 577777777663
No 72
>PLN02442 S-formylglutathione hydrolase
Probab=99.33 E-value=2.3e-11 Score=80.99 Aligned_cols=94 Identities=18% Similarity=0.140 Sum_probs=67.3
Q ss_pred CEeecCCCCCHhhHHHHH---HhhhC-CceEEEecCCCCCCC--------------------c-c----ch---h---hH
Q psy1324 1 MLFLHGFPESWYIWKHQM---SEFSH-EYWTVAVDIKTNFRT--------------------I-A----DR---Y---FL 45 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~---~~l~~-~~~v~~~d~~g~g~s--------------------~-~----~~---~---~~ 45 (115)
|+++||++++...|.... +.+.. ++.|+.+|.+++|.. . . .. | +.
T Consensus 50 v~~lHG~~~~~~~~~~~~~~~~~~~~~g~~Vv~pd~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 129 (283)
T PLN02442 50 LYWLSGLTCTDENFIQKSGAQRAAAARGIALVAPDTSPRGLNVEGEADSWDFGVGAGFYLNATQEKWKNWRMYDYVVKEL 129 (283)
T ss_pred EEEecCCCcChHHHHHhhhHHHHHhhcCeEEEecCCCCCCCCCCCCccccccCCCcceeeccccCCCcccchhhhHHHHH
Confidence 589999999888775433 33444 899999997654410 0 0 01 1 23
Q ss_pred HHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 46 VDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 46 ~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
.+.+....+.++.++++++||||||..++.++.++|+++++++.+++..
T Consensus 130 ~~~i~~~~~~~~~~~~~i~G~S~GG~~a~~~a~~~p~~~~~~~~~~~~~ 178 (283)
T PLN02442 130 PKLLSDNFDQLDTSRASIFGHSMGGHGALTIYLKNPDKYKSVSAFAPIA 178 (283)
T ss_pred HHHHHHHHHhcCCCceEEEEEChhHHHHHHHHHhCchhEEEEEEECCcc
Confidence 3333343444566889999999999999999999999999999988774
No 73
>PRK07868 acyl-CoA synthetase; Validated
Probab=99.27 E-value=1.3e-11 Score=93.84 Aligned_cols=91 Identities=14% Similarity=0.178 Sum_probs=66.8
Q ss_pred CEeecCCCCCHhhHHHH-----HHhhhC-CceEEEecCCCCCCC--ccch----h-hHHHHHHHHHHH---hCCCCeeEE
Q psy1324 1 MLFLHGFPESWYIWKHQ-----MSEFSH-EYWTVAVDIKTNFRT--IADR----Y-FLVDSLKVFLDH---LGRNRCILI 64 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~-----~~~l~~-~~~v~~~d~~g~g~s--~~~~----~-~~~~~~~~~~~~---~~~~~~~lv 64 (115)
||++||++.+.+.|+.. ++.|.+ +|+|+++|+ |.+ +... + +.+..+.+.++. ...++++++
T Consensus 70 lllvhg~~~~~~~~d~~~~~s~v~~L~~~g~~v~~~d~---G~~~~~~~~~~~~l~~~i~~l~~~l~~v~~~~~~~v~lv 146 (994)
T PRK07868 70 VLMVHPMMMSADMWDVTRDDGAVGILHRAGLDPWVIDF---GSPDKVEGGMERNLADHVVALSEAIDTVKDVTGRDVHLV 146 (994)
T ss_pred EEEECCCCCCccceecCCcccHHHHHHHCCCEEEEEcC---CCCChhHcCccCCHHHHHHHHHHHHHHHHHhhCCceEEE
Confidence 68999999999999865 677754 899999995 444 2111 2 333344444433 334789999
Q ss_pred EEchhHHHHHHHHHhC-cccccceEEecCCC
Q psy1324 65 GRDFGGSLVWSFLDKY-PELVVKSIIINVPH 94 (115)
Q Consensus 65 g~S~Gg~~a~~~~~~~-~~~v~~~v~~~~~~ 94 (115)
||||||.+++.++..+ +++|+++++++++.
T Consensus 147 G~s~GG~~a~~~aa~~~~~~v~~lvl~~~~~ 177 (994)
T PRK07868 147 GYSQGGMFCYQAAAYRRSKDIASIVTFGSPV 177 (994)
T ss_pred EEChhHHHHHHHHHhcCCCccceEEEEeccc
Confidence 9999999999998755 56899999988774
No 74
>PF10230 DUF2305: Uncharacterised conserved protein (DUF2305); InterPro: IPR019363 This entry contains proteins that have no known function.
Probab=99.27 E-value=8.2e-11 Score=77.75 Aligned_cols=94 Identities=18% Similarity=0.309 Sum_probs=75.2
Q ss_pred CEeecCCCCCHhhHHHHHHhhh----CCceEEEecCCCCCCCccc-------h-h---hHHHHHHHHHHHh------CCC
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFS----HEYWTVAVDIKTNFRTIAD-------R-Y---FLVDSLKVFLDHL------GRN 59 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~----~~~~v~~~d~~g~g~s~~~-------~-~---~~~~~~~~~~~~~------~~~ 59 (115)
+++++|.++-.+.|..+.+.|. ..+.++++...||..++.. . | ++++...+++++. ...
T Consensus 5 i~~IPGNPGlv~fY~~Fl~~L~~~l~~~~~i~~ish~Gh~~~~~~~~~~~~~~~~sL~~QI~hk~~~i~~~~~~~~~~~~ 84 (266)
T PF10230_consen 5 IVFIPGNPGLVEFYEEFLSALYEKLNPQFEILGISHAGHSTSPSNSKFSPNGRLFSLQDQIEHKIDFIKELIPQKNKPNV 84 (266)
T ss_pred EEEECCCCChHHHHHHHHHHHHHhCCCCCeeEEecCCCCcCCcccccccCCCCccCHHHHHHHHHHHHHHHhhhhcCCCC
Confidence 5899999999999999988774 4899999999999777222 2 4 6666666666654 235
Q ss_pred CeeEEEEchhHHHHHHHHHhCc---ccccceEEecCCC
Q psy1324 60 RCILIGRDFGGSLVWSFLDKYP---ELVVKSIIINVPH 94 (115)
Q Consensus 60 ~~~lvg~S~Gg~~a~~~~~~~~---~~v~~~v~~~~~~ 94 (115)
+++++|||.|++++++.+.+.+ .+|.+++++-|..
T Consensus 85 ~liLiGHSIGayi~levl~r~~~~~~~V~~~~lLfPTi 122 (266)
T PF10230_consen 85 KLILIGHSIGAYIALEVLKRLPDLKFRVKKVILLFPTI 122 (266)
T ss_pred cEEEEeCcHHHHHHHHHHHhccccCCceeEEEEeCCcc
Confidence 7999999999999999999999 6788888776553
No 75
>COG3208 GrsT Predicted thioesterase involved in non-ribosomal peptide biosynthesis [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.27 E-value=3.1e-11 Score=77.65 Aligned_cols=95 Identities=15% Similarity=0.085 Sum_probs=73.7
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC-ccch---h-hHHHHHHHHHH-HhCCCCeeEEEEchhHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT-IADR---Y-FLVDSLKVFLD-HLGRNRCILIGRDFGGSLVW 74 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s-~~~~---~-~~~~~~~~~~~-~~~~~~~~lvg~S~Gg~~a~ 74 (115)
++++|-.+++...|+.+..++.....++++++||.+.. .+.- . .+++.+..-+. -...+++.+.||||||++|.
T Consensus 10 L~cfP~AGGsa~~fr~W~~~lp~~iel~avqlPGR~~r~~ep~~~di~~Lad~la~el~~~~~d~P~alfGHSmGa~lAf 89 (244)
T COG3208 10 LFCFPHAGGSASLFRSWSRRLPADIELLAVQLPGRGDRFGEPLLTDIESLADELANELLPPLLDAPFALFGHSMGAMLAF 89 (244)
T ss_pred EEEecCCCCCHHHHHHHHhhCCchhheeeecCCCcccccCCcccccHHHHHHHHHHHhccccCCCCeeecccchhHHHHH
Confidence 47889999999999999999988999999999999887 2221 2 56666666555 34457899999999999999
Q ss_pred HHHHhCcc---cccceEEecCCCC
Q psy1324 75 SFLDKYPE---LVVKSIIINVPHP 95 (115)
Q Consensus 75 ~~~~~~~~---~v~~~v~~~~~~~ 95 (115)
+++.+..+ ...++.+.++..|
T Consensus 90 EvArrl~~~g~~p~~lfisg~~aP 113 (244)
T COG3208 90 EVARRLERAGLPPRALFISGCRAP 113 (244)
T ss_pred HHHHHHHHcCCCcceEEEecCCCC
Confidence 99988642 2556666666655
No 76
>PRK11460 putative hydrolase; Provisional
Probab=99.26 E-value=9.7e-11 Score=75.95 Aligned_cols=94 Identities=18% Similarity=0.148 Sum_probs=62.2
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-C--ceEEEecCCC-----CCCC--------ccchh----hHHHHHHHHH----HHh
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-E--YWTVAVDIKT-----NFRT--------IADRY----FLVDSLKVFL----DHL 56 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~--~~v~~~d~~g-----~g~s--------~~~~~----~~~~~~~~~~----~~~ 56 (115)
||++||++++...|.++.+.+.+ . ..++.++-+. .+.+ ..... ...+.+.+.+ ++.
T Consensus 19 vIlLHG~G~~~~~~~~l~~~l~~~~~~~~~i~~~g~~~~~~~~g~~W~~~~~~~~~~~~~~~~~~~~~l~~~i~~~~~~~ 98 (232)
T PRK11460 19 LLLFHGVGDNPVAMGEIGSWFAPAFPDALVVSVGGPEPSGNGAGRQWFSVQGITEDNRQARVAAIMPTFIETVRYWQQQS 98 (232)
T ss_pred EEEEeCCCCChHHHHHHHHHHHHHCCCCEEECCCCCCCcCCCCCcccccCCCCCccchHHHHHHHHHHHHHHHHHHHHhc
Confidence 68999999999999999998865 3 3444444321 0111 00000 1222232333 233
Q ss_pred C--CCCeeEEEEchhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 57 G--RNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 57 ~--~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
+ .++++++|||+||.+++.++.++|+.+.+++.+++..
T Consensus 99 ~~~~~~i~l~GfS~Gg~~al~~a~~~~~~~~~vv~~sg~~ 138 (232)
T PRK11460 99 GVGASATALIGFSQGAIMALEAVKAEPGLAGRVIAFSGRY 138 (232)
T ss_pred CCChhhEEEEEECHHHHHHHHHHHhCCCcceEEEEecccc
Confidence 3 3589999999999999999999999888888777653
No 77
>TIGR00976 /NonD putative hydrolase, CocE/NonD family. This model represents a protein subfamily that includes the cocaine esterase CocE, several glutaryl-7-ACA acylases, and the putative diester hydrolase NonD of Streptomyces griseus (all hydrolases). This family shows extensive, low-level similarity to a family of xaa-pro dipeptidyl-peptidases, and local similarity by PSI-BLAST to many other hydrolases.
Probab=99.23 E-value=3.1e-11 Score=86.83 Aligned_cols=94 Identities=10% Similarity=-0.068 Sum_probs=68.5
Q ss_pred CEeecCCCCCHh---hHH-HHHHhh-hCCceEEEecCCCCCCCc--cchh--hHHHHHHHHHHHhC-----CCCeeEEEE
Q psy1324 1 MLFLHGFPESWY---IWK-HQMSEF-SHEYWTVAVDIKTNFRTI--ADRY--FLVDSLKVFLDHLG-----RNRCILIGR 66 (115)
Q Consensus 1 vl~~hG~~~~~~---~~~-~~~~~l-~~~~~v~~~d~~g~g~s~--~~~~--~~~~~~~~~~~~~~-----~~~~~lvg~ 66 (115)
||++||++.+.. .+. .....+ .++|.|+.+|.||+|.|. ...+ ...+++.++++.+. ..++.++|+
T Consensus 25 Il~~~gyg~~~~~~~~~~~~~~~~l~~~Gy~vv~~D~RG~g~S~g~~~~~~~~~~~D~~~~i~~l~~q~~~~~~v~~~G~ 104 (550)
T TIGR00976 25 ILSRTPYGKDAGLRWGLDKTEPAWFVAQGYAVVIQDTRGRGASEGEFDLLGSDEAADGYDLVDWIAKQPWCDGNVGMLGV 104 (550)
T ss_pred EEEecCCCCchhhccccccccHHHHHhCCcEEEEEeccccccCCCceEecCcccchHHHHHHHHHHhCCCCCCcEEEEEe
Confidence 578999987653 121 223344 459999999999999991 1111 44555555555442 358999999
Q ss_pred chhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 67 DFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 67 S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
|+||.+++.++..+|+.+++++..++..
T Consensus 105 S~GG~~a~~~a~~~~~~l~aiv~~~~~~ 132 (550)
T TIGR00976 105 SYLAVTQLLAAVLQPPALRAIAPQEGVW 132 (550)
T ss_pred ChHHHHHHHHhccCCCceeEEeecCccc
Confidence 9999999999999999999999877654
No 78
>KOG1552|consensus
Probab=99.20 E-value=1.7e-10 Score=74.78 Aligned_cols=92 Identities=20% Similarity=0.259 Sum_probs=72.9
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC--CceEEEecCCCCCCC---ccch--hhHHHHHHHHHHHhC--CCCeeEEEEchhHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH--EYWTVAVDIKTNFRT---IADR--YFLVDSLKVFLDHLG--RNRCILIGRDFGGS 71 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s---~~~~--~~~~~~~~~~~~~~~--~~~~~lvg~S~Gg~ 71 (115)
+++.||...+......+...+.. +.+++..|++|+|.| |.+. ++.++.+-+.+++-. .++++++|+|+|+.
T Consensus 63 lly~hGNa~Dlgq~~~~~~~l~~~ln~nv~~~DYSGyG~S~G~psE~n~y~Di~avye~Lr~~~g~~~~Iil~G~SiGt~ 142 (258)
T KOG1552|consen 63 LLYSHGNAADLGQMVELFKELSIFLNCNVVSYDYSGYGRSSGKPSERNLYADIKAVYEWLRNRYGSPERIILYGQSIGTV 142 (258)
T ss_pred EEEcCCcccchHHHHHHHHHHhhcccceEEEEecccccccCCCcccccchhhHHHHHHHHHhhcCCCceEEEEEecCCch
Confidence 57899997777666666666655 999999999999999 3333 366666666665443 57999999999999
Q ss_pred HHHHHHHhCcccccceEEecCCC
Q psy1324 72 LVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 72 ~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
.+..+|.+.| ++++|+.++..
T Consensus 143 ~tv~Lasr~~--~~alVL~SPf~ 163 (258)
T KOG1552|consen 143 PTVDLASRYP--LAAVVLHSPFT 163 (258)
T ss_pred hhhhHhhcCC--cceEEEeccch
Confidence 9999999998 99999988764
No 79
>PF06821 Ser_hydrolase: Serine hydrolase; InterPro: IPR010662 This family contains a number of hypothetical bacterial proteins of unknown function, which may be cytosolic. The Crystal Structure Of The Yden Gene Product Swiss:P96671 from B. Subtilis has been solved. The structure shows an alpha-beta hydrolase fold suggesting an enzymatic function for these proteins [].; GO: 0016787 hydrolase activity; PDB: 3BDV_B 2QS9_A 1UXO_A.
Probab=99.20 E-value=9.3e-11 Score=72.81 Aligned_cols=90 Identities=17% Similarity=0.275 Sum_probs=60.5
Q ss_pred CEeecCCCCCH-hhHHHHHH-hhhCCceEEEecCCCCCCCccchhhHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHH-
Q psy1324 1 MLFLHGFPESW-YIWKHQMS-EFSHEYWTVAVDIKTNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFL- 77 (115)
Q Consensus 1 vl~~hG~~~~~-~~~~~~~~-~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~- 77 (115)
|+++||++++. +.|.+..+ ++...++|-.+++ ..|... +|.+.+.+.+.... +++++||||+|+..+++++
T Consensus 1 v~IvhG~~~s~~~HW~~wl~~~l~~~~~V~~~~~----~~P~~~-~W~~~l~~~i~~~~-~~~ilVaHSLGc~~~l~~l~ 74 (171)
T PF06821_consen 1 VLIVHGYGGSPPDHWQPWLERQLENSVRVEQPDW----DNPDLD-EWVQALDQAIDAID-EPTILVAHSLGCLTALRWLA 74 (171)
T ss_dssp EEEE--TTSSTTTSTHHHHHHHHTTSEEEEEC------TS--HH-HHHHHHHHCCHC-T-TTEEEEEETHHHHHHHHHHH
T ss_pred CEEeCCCCCCCccHHHHHHHHhCCCCeEEecccc----CCCCHH-HHHHHHHHHHhhcC-CCeEEEEeCHHHHHHHHHHh
Confidence 58999998764 56887765 4554566665555 122211 66666666666553 6799999999999999999
Q ss_pred HhCcccccceEEecCCCCh
Q psy1324 78 DKYPELVVKSIIINVPHPA 96 (115)
Q Consensus 78 ~~~~~~v~~~v~~~~~~~~ 96 (115)
.....+|+++++++++...
T Consensus 75 ~~~~~~v~g~lLVAp~~~~ 93 (171)
T PF06821_consen 75 EQSQKKVAGALLVAPFDPD 93 (171)
T ss_dssp HTCCSSEEEEEEES--SCG
T ss_pred hcccccccEEEEEcCCCcc
Confidence 7778899999999999764
No 80
>PRK10252 entF enterobactin synthase subunit F; Provisional
Probab=99.19 E-value=3.3e-10 Score=87.81 Aligned_cols=94 Identities=10% Similarity=0.038 Sum_probs=78.8
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC-ccch-h-hHHHHHHHHHHHhCC-CCeeEEEEchhHHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT-IADR-Y-FLVDSLKVFLDHLGR-NRCILIGRDFGGSLVWSF 76 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s-~~~~-~-~~~~~~~~~~~~~~~-~~~~lvg~S~Gg~~a~~~ 76 (115)
++++||.+++...|..+.+.+..++.++.++.||++.. +... . ++++++.+.++++.. .+++++|||+||.++..+
T Consensus 1071 l~~lh~~~g~~~~~~~l~~~l~~~~~v~~~~~~g~~~~~~~~~~l~~la~~~~~~i~~~~~~~p~~l~G~S~Gg~vA~e~ 1150 (1296)
T PRK10252 1071 LFCFHPASGFAWQFSVLSRYLDPQWSIYGIQSPRPDGPMQTATSLDEVCEAHLATLLEQQPHGPYHLLGYSLGGTLAQGI 1150 (1296)
T ss_pred eEEecCCCCchHHHHHHHHhcCCCCcEEEEECCCCCCCCCCCCCHHHHHHHHHHHHHhhCCCCCEEEEEechhhHHHHHH
Confidence 58999999999999999999988999999999999866 2211 3 778888888877653 589999999999999999
Q ss_pred HHh---CcccccceEEecCCC
Q psy1324 77 LDK---YPELVVKSIIINVPH 94 (115)
Q Consensus 77 ~~~---~~~~v~~~v~~~~~~ 94 (115)
+.+ .++++..++++++..
T Consensus 1151 A~~l~~~~~~v~~l~l~~~~~ 1171 (1296)
T PRK10252 1151 AARLRARGEEVAFLGLLDTWP 1171 (1296)
T ss_pred HHHHHHcCCceeEEEEecCCC
Confidence 986 477899999988644
No 81
>PF03096 Ndr: Ndr family; InterPro: IPR004142 This family consists of proteins from different gene families: Ndr1/RTP/Drg1, Ndr2, and Ndr3. Their similarity was previously noted []. The precise molecular and cellular function of members of this family is still unknown, yet they are known to be involved in cellular differentiation events. The Ndr1 group was the first to be discovered. Their expression is repressed by the proto-oncogenes N-myc and c-myc, and in line with this observation, Ndr1 protein expression is down-regulated in neoplastic cells, and is reactivated when differentiation is induced by chemicals such as retinoic acid. Ndr2 and Ndr3 expression is not under the control of N-myc or c-myc. Ndr1 expression is also activated by several chemicals: tunicamycin and homocysteine induce Ndr1 in human umbilical endothelial cells; nickel induces Ndr1 in several cell types. Members of this family are found in wide variety of multicellular eukaryotes, including an Ndr1 type protein in Helianthus annuus (Common sunflower), known as Sf21. Interestingly, the highest scoring matches in the noise are all alpha/beta hydrolases (IPR000073 from INTERPRO), suggesting that this family may have an enzymatic function.; PDB: 2QMQ_A 2XMR_B 2XMQ_B 2XMS_A.
Probab=99.14 E-value=6.1e-10 Score=73.54 Aligned_cols=98 Identities=22% Similarity=0.260 Sum_probs=69.6
Q ss_pred CEeecCCCCCHhh-HHHHH-----HhhhCCceEEEecCCCCCCC----ccch-h----hHHHHHHHHHHHhCCCCeeEEE
Q psy1324 1 MLFLHGFPESWYI-WKHQM-----SEFSHEYWTVAVDIKTNFRT----IADR-Y----FLVDSLKVFLDHLGRNRCILIG 65 (115)
Q Consensus 1 vl~~hG~~~~~~~-~~~~~-----~~l~~~~~v~~~d~~g~g~s----~~~~-~----~~~~~~~~~~~~~~~~~~~lvg 65 (115)
+|-.|..+-+... |+.++ +.+.+.|.++-+|.||+... |.+. | ++++++.+++++++.+.++.+|
T Consensus 26 ilT~HDvGlNh~scF~~ff~~~~m~~i~~~f~i~Hi~aPGqe~ga~~~p~~y~yPsmd~LAe~l~~Vl~~f~lk~vIg~G 105 (283)
T PF03096_consen 26 ILTYHDVGLNHKSCFQGFFNFEDMQEILQNFCIYHIDAPGQEEGAATLPEGYQYPSMDQLAEMLPEVLDHFGLKSVIGFG 105 (283)
T ss_dssp EEEE--TT--HHHHCHHHHCSHHHHHHHTTSEEEEEE-TTTSTT-----TT-----HHHHHCTHHHHHHHHT---EEEEE
T ss_pred EEEeccccccchHHHHHHhcchhHHHHhhceEEEEEeCCCCCCCcccccccccccCHHHHHHHHHHHHHhCCccEEEEEe
Confidence 3567888777766 66654 35677999999999999665 4332 4 8899999999999999999999
Q ss_pred EchhHHHHHHHHHhCcccccceEEecCCCChhH
Q psy1324 66 RDFGGSLVWSFLDKYPELVVKSIIINVPHPAVF 98 (115)
Q Consensus 66 ~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~~~~ 98 (115)
...||++...+|.++|+++.++|++++.+....
T Consensus 106 vGAGAnIL~rfAl~~p~~V~GLiLvn~~~~~~g 138 (283)
T PF03096_consen 106 VGAGANILARFALKHPERVLGLILVNPTCTAAG 138 (283)
T ss_dssp ETHHHHHHHHHHHHSGGGEEEEEEES---S---
T ss_pred eccchhhhhhccccCccceeEEEEEecCCCCcc
Confidence 999999999999999999999999998875444
No 82
>KOG2565|consensus
Probab=99.13 E-value=2.5e-10 Score=77.42 Aligned_cols=92 Identities=18% Similarity=0.304 Sum_probs=77.2
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC----------CceEEEecCCCCCCC--ccch-h---hHHHHHHHHHHHhCCCCeeEE
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH----------EYWTVAVDIKTNFRT--IADR-Y---FLVDSLKVFLDHLGRNRCILI 64 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~----------~~~v~~~d~~g~g~s--~~~~-~---~~~~~~~~~~~~~~~~~~~lv 64 (115)
++++||++++-..+..++..|.+ -|+|++|.+||+|+| +... | +.+.-+..++=+++.+++.+=
T Consensus 155 lLl~HGwPGsv~EFykfIPlLT~p~~hg~~~d~~FEVI~PSlPGygwSd~~sk~GFn~~a~ArvmrkLMlRLg~nkffiq 234 (469)
T KOG2565|consen 155 LLLLHGWPGSVREFYKFIPLLTDPKRHGNESDYAFEVIAPSLPGYGWSDAPSKTGFNAAATARVMRKLMLRLGYNKFFIQ 234 (469)
T ss_pred eEEecCCCchHHHHHhhhhhhcCccccCCccceeEEEeccCCCCcccCcCCccCCccHHHHHHHHHHHHHHhCcceeEee
Confidence 58999999999888888887733 388999999999999 3333 5 667777788888999999999
Q ss_pred EEchhHHHHHHHHHhCcccccceEEecC
Q psy1324 65 GRDFGGSLVWSFLDKYPELVVKSIIINV 92 (115)
Q Consensus 65 g~S~Gg~~a~~~~~~~~~~v~~~v~~~~ 92 (115)
|-.+|+.++..++..+|+.|.++=+--|
T Consensus 235 GgDwGSiI~snlasLyPenV~GlHlnm~ 262 (469)
T KOG2565|consen 235 GGDWGSIIGSNLASLYPENVLGLHLNMC 262 (469)
T ss_pred cCchHHHHHHHHHhhcchhhhHhhhccc
Confidence 9999999999999999999998754333
No 83
>PLN02733 phosphatidylcholine-sterol O-acyltransferase
Probab=99.12 E-value=4.8e-10 Score=78.60 Aligned_cols=89 Identities=17% Similarity=0.207 Sum_probs=67.4
Q ss_pred CCHhhHHHHHHhhhC-CceEEEecCCCCCCC-ccch----h--hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhC
Q psy1324 9 ESWYIWKHQMSEFSH-EYWTVAVDIKTNFRT-IADR----Y--FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKY 80 (115)
Q Consensus 9 ~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s-~~~~----~--~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~ 80 (115)
.....|..+++.|.+ +|.. ..|++|++.+ +... + .+.+.+.++.++.+.++++++||||||.++..++..+
T Consensus 105 ~~~~~~~~li~~L~~~GY~~-~~dL~g~gYDwR~~~~~~~~~~~Lk~lIe~~~~~~g~~kV~LVGHSMGGlva~~fl~~~ 183 (440)
T PLN02733 105 DEVYYFHDMIEQLIKWGYKE-GKTLFGFGYDFRQSNRLPETMDGLKKKLETVYKASGGKKVNIISHSMGGLLVKCFMSLH 183 (440)
T ss_pred chHHHHHHHHHHHHHcCCcc-CCCcccCCCCccccccHHHHHHHHHHHHHHHHHHcCCCCEEEEEECHhHHHHHHHHHHC
Confidence 345779999999977 6654 7899999988 2111 2 4444555555666778999999999999999999988
Q ss_pred ccc----ccceEEecCCCChhH
Q psy1324 81 PEL----VVKSIIINVPHPAVF 98 (115)
Q Consensus 81 ~~~----v~~~v~~~~~~~~~~ 98 (115)
|+. |+++|.++++.....
T Consensus 184 p~~~~k~I~~~I~la~P~~Gs~ 205 (440)
T PLN02733 184 SDVFEKYVNSWIAIAAPFQGAP 205 (440)
T ss_pred CHhHHhHhccEEEECCCCCCCc
Confidence 864 788999998865543
No 84
>COG2021 MET2 Homoserine acetyltransferase [Amino acid transport and metabolism]
Probab=99.11 E-value=4.3e-10 Score=76.19 Aligned_cols=104 Identities=16% Similarity=0.357 Sum_probs=78.4
Q ss_pred CEeecCCCCCHh-----------hHHHHHHh---hh-CCceEEEecCCCCC--CC------ccch-----h------hHH
Q psy1324 1 MLFLHGFPESWY-----------IWKHQMSE---FS-HEYWTVAVDIKTNF--RT------IADR-----Y------FLV 46 (115)
Q Consensus 1 vl~~hG~~~~~~-----------~~~~~~~~---l~-~~~~v~~~d~~g~g--~s------~~~~-----~------~~~ 46 (115)
|+++|+++++.. -|+.++.. +. +.|-|++.|..|.. .+ |.+. | +++
T Consensus 54 Vli~HaLtG~~h~~~~~~~~~~GWW~~liGpG~~iDt~r~fvIc~NvlG~c~GStgP~s~~p~g~~yg~~FP~~ti~D~V 133 (368)
T COG2021 54 VLICHALTGDSHAAGTADDGEKGWWDDLIGPGKPIDTERFFVICTNVLGGCKGSTGPSSINPGGKPYGSDFPVITIRDMV 133 (368)
T ss_pred EEEeccccCcccccccCCCCCCccHHHhcCCCCCCCccceEEEEecCCCCCCCCCCCCCcCCCCCccccCCCcccHHHHH
Confidence 578999988543 34444331 22 27999999988754 22 3311 2 566
Q ss_pred HHHHHHHHHhCCCCee-EEEEchhHHHHHHHHHhCcccccceEEecCCCChhHHHHHHh
Q psy1324 47 DSLKVFLDHLGRNRCI-LIGRDFGGSLVWSFLDKYPELVVKSIIINVPHPAVFKQELKK 104 (115)
Q Consensus 47 ~~~~~~~~~~~~~~~~-lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~ 104 (115)
+.-..+++++|.+++. ++|-||||+.++.++..||+++++++.+++.......+...+
T Consensus 134 ~aq~~ll~~LGI~~l~avvGgSmGGMqaleWa~~yPd~V~~~i~ia~~~r~s~~~ia~~ 192 (368)
T COG2021 134 RAQRLLLDALGIKKLAAVVGGSMGGMQALEWAIRYPDRVRRAIPIATAARLSAQNIAFN 192 (368)
T ss_pred HHHHHHHHhcCcceEeeeeccChHHHHHHHHHHhChHHHhhhheecccccCCHHHHHHH
Confidence 6667788999999987 799999999999999999999999999999887777666655
No 85
>PF02230 Abhydrolase_2: Phospholipase/Carboxylesterase; InterPro: IPR003140 This entry represents the alpha/beta hydrolase domain found in phospholipases [], carboxylesterases [] and thioesterases.; GO: 0016787 hydrolase activity; PDB: 3U0V_A 1AUR_A 1AUO_B 1FJ2_B 3CN9_A 3CN7_A.
Probab=99.09 E-value=1.5e-09 Score=69.54 Aligned_cols=96 Identities=15% Similarity=0.209 Sum_probs=59.5
Q ss_pred CEeecCCCCCHhhHHHHHH-hhh-CCceEEEecCCC------CCC---C--------ccc---h--h-hHHHHHHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMS-EFS-HEYWTVAVDIKT------NFR---T--------IAD---R--Y-FLVDSLKVFLDH 55 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~-~l~-~~~~v~~~d~~g------~g~---s--------~~~---~--~-~~~~~~~~~~~~ 55 (115)
||++||++.+.+.|..... ... .+..++.++-|. .|. + +.. . . ...+.+.++++.
T Consensus 17 vi~LHG~G~~~~~~~~~~~~~~~~~~~~~i~p~ap~~~~~~~~g~~~~~Wf~~~~~~~~~~~~~~~i~~s~~~l~~li~~ 96 (216)
T PF02230_consen 17 VILLHGYGDSEDLFALLAELNLALPNTRFISPRAPSRPVTVPGGYRMPAWFDIYDFDPEGPEDEAGIEESAERLDELIDE 96 (216)
T ss_dssp EEEE--TTS-HHHHHHHHHHHTCSTTEEEEEE---EEE-GGGTT-EEE-SS-BSCSSSSSEB-HHHHHHHHHHHHHHHHH
T ss_pred EEEECCCCCCcchhHHHHhhcccCCceEEEeccCCCCCcccccccCCCceeeccCCCcchhhhHHHHHHHHHHHHHHHHH
Confidence 6899999999988877766 222 366777665431 121 1 111 1 1 334444444443
Q ss_pred h-----CCCCeeEEEEchhHHHHHHHHHhCcccccceEEecCCCCh
Q psy1324 56 L-----GRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHPA 96 (115)
Q Consensus 56 ~-----~~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~~ 96 (115)
. +.+++++.|+|.||.+++.++.++|+.+.+++.+++..+.
T Consensus 97 ~~~~~i~~~ri~l~GFSQGa~~al~~~l~~p~~~~gvv~lsG~~~~ 142 (216)
T PF02230_consen 97 EVAYGIDPSRIFLGGFSQGAAMALYLALRYPEPLAGVVALSGYLPP 142 (216)
T ss_dssp HHHTT--GGGEEEEEETHHHHHHHHHHHCTSSTSSEEEEES---TT
T ss_pred HHHcCCChhheehhhhhhHHHHHHHHHHHcCcCcCEEEEeeccccc
Confidence 2 3468999999999999999999999999999999987654
No 86
>KOG2931|consensus
Probab=99.08 E-value=1.1e-09 Score=72.27 Aligned_cols=97 Identities=23% Similarity=0.257 Sum_probs=79.7
Q ss_pred CEeecCCCCCHhh-HHHHHH-----hhhCCceEEEecCCCCCCC----ccch-h----hHHHHHHHHHHHhCCCCeeEEE
Q psy1324 1 MLFLHGFPESWYI-WKHQMS-----EFSHEYWTVAVDIKTNFRT----IADR-Y----FLVDSLKVFLDHLGRNRCILIG 65 (115)
Q Consensus 1 vl~~hG~~~~~~~-~~~~~~-----~l~~~~~v~~~d~~g~g~s----~~~~-~----~~~~~~~~~~~~~~~~~~~lvg 65 (115)
+|-.|..+-+... |+.++. .+.+.|.++.+|.||+-.. |.+- | +.++++..++++++.+.++-+|
T Consensus 49 iiTyhDlglN~~scFq~ff~~p~m~ei~~~fcv~HV~~PGqe~gAp~~p~~y~yPsmd~LAd~l~~VL~~f~lk~vIg~G 128 (326)
T KOG2931|consen 49 IITYHDLGLNHKSCFQGFFNFPDMAEILEHFCVYHVDAPGQEDGAPSFPEGYPYPSMDDLADMLPEVLDHFGLKSVIGMG 128 (326)
T ss_pred EEEecccccchHhHhHHhhcCHhHHHHHhheEEEecCCCccccCCccCCCCCCCCCHHHHHHHHHHHHHhcCcceEEEec
Confidence 3557888877665 666543 4555799999999998554 4442 3 8899999999999999999999
Q ss_pred EchhHHHHHHHHHhCcccccceEEecCCCChh
Q psy1324 66 RDFGGSLVWSFLDKYPELVVKSIIINVPHPAV 97 (115)
Q Consensus 66 ~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~~~ 97 (115)
...|+++..++|..||++|.++|++++.+...
T Consensus 129 vGAGAyIL~rFAl~hp~rV~GLvLIn~~~~a~ 160 (326)
T KOG2931|consen 129 VGAGAYILARFALNHPERVLGLVLINCDPCAK 160 (326)
T ss_pred ccccHHHHHHHHhcChhheeEEEEEecCCCCc
Confidence 99999999999999999999999999776543
No 87
>PF12740 Chlorophyllase2: Chlorophyllase enzyme; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=99.06 E-value=2.4e-09 Score=70.10 Aligned_cols=94 Identities=20% Similarity=0.223 Sum_probs=68.4
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCCCCC-cc-ch--h-hHHHHHHHHHH-Hh------CCCCeeEEEEc
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFRT-IA-DR--Y-FLVDSLKVFLD-HL------GRNRCILIGRD 67 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s-~~-~~--~-~~~~~~~~~~~-~~------~~~~~~lvg~S 67 (115)
+||+||+......|..+.++++. ||.|+.+|+...... .. +. . +.++.+.+-++ .+ +..++.+.|||
T Consensus 20 v~f~~G~~~~~s~Ys~ll~hvAShGyIVV~~d~~~~~~~~~~~~~~~~~~vi~Wl~~~L~~~l~~~v~~D~s~l~l~GHS 99 (259)
T PF12740_consen 20 VLFLHGFLLINSWYSQLLEHVASHGYIVVAPDLYSIGGPDDTDEVASAAEVIDWLAKGLESKLPLGVKPDFSKLALAGHS 99 (259)
T ss_pred EEEeCCcCCCHHHHHHHHHHHHhCceEEEEecccccCCCCcchhHHHHHHHHHHHHhcchhhccccccccccceEEeeeC
Confidence 58999999888889999999977 999999996654332 11 11 1 22222222111 11 34589999999
Q ss_pred hhHHHHHHHHHhC-----cccccceEEecCCC
Q psy1324 68 FGGSLVWSFLDKY-----PELVVKSIIINVPH 94 (115)
Q Consensus 68 ~Gg~~a~~~~~~~-----~~~v~~~v~~~~~~ 94 (115)
-||-++..++..+ +.+++++++++|-.
T Consensus 100 rGGk~Af~~al~~~~~~~~~~~~ali~lDPVd 131 (259)
T PF12740_consen 100 RGGKVAFAMALGNASSSLDLRFSALILLDPVD 131 (259)
T ss_pred CCCHHHHHHHhhhcccccccceeEEEEecccc
Confidence 9999999999997 45899999999765
No 88
>KOG1838|consensus
Probab=99.05 E-value=2.7e-09 Score=73.51 Aligned_cols=94 Identities=15% Similarity=0.306 Sum_probs=68.9
Q ss_pred CEeecCCCCCH--hhHHHHHHhhhC-CceEEEecCCCCCCC--ccch-h--hHHHHHHHHHHHh----CCCCeeEEEEch
Q psy1324 1 MLFLHGFPESW--YIWKHQMSEFSH-EYWTVAVDIKTNFRT--IADR-Y--FLVDSLKVFLDHL----GRNRCILIGRDF 68 (115)
Q Consensus 1 vl~~hG~~~~~--~~~~~~~~~l~~-~~~v~~~d~~g~g~s--~~~~-~--~~~~~~~~~~~~~----~~~~~~lvg~S~ 68 (115)
||++||..+++ ..-+.++.++.+ ||+++.++.||++.+ .... | .+.+|+.++++++ ...++..+|.||
T Consensus 128 vvilpGltg~S~~~YVr~lv~~a~~~G~r~VVfN~RG~~g~~LtTpr~f~ag~t~Dl~~~v~~i~~~~P~a~l~avG~S~ 207 (409)
T KOG1838|consen 128 VVILPGLTGGSHESYVRHLVHEAQRKGYRVVVFNHRGLGGSKLTTPRLFTAGWTEDLREVVNHIKKRYPQAPLFAVGFSM 207 (409)
T ss_pred EEEecCCCCCChhHHHHHHHHHHHhCCcEEEEECCCCCCCCccCCCceeecCCHHHHHHHHHHHHHhCCCCceEEEEecc
Confidence 68999996544 334667776654 999999999999888 3333 4 6777777777665 346899999999
Q ss_pred hHHHHHHHHHhCccc--ccceEEecCCC
Q psy1324 69 GGSLVWSFLDKYPEL--VVKSIIINVPH 94 (115)
Q Consensus 69 Gg~~a~~~~~~~~~~--v~~~v~~~~~~ 94 (115)
||.+..+|+.+..+. +.+.+.++.|.
T Consensus 208 Gg~iL~nYLGE~g~~~~l~~a~~v~~Pw 235 (409)
T KOG1838|consen 208 GGNILTNYLGEEGDNTPLIAAVAVCNPW 235 (409)
T ss_pred hHHHHHHHhhhccCCCCceeEEEEeccc
Confidence 999999999996543 44444454443
No 89
>PF06500 DUF1100: Alpha/beta hydrolase of unknown function (DUF1100); InterPro: IPR010520 Proteins in this entry display esterase activity toward pNP-butyrate []. This entry also includes 2,6-dihydropseudooxynicotine hydrolase which has a role in nicotine catabolism by cleaving a C-C bond in 2,6-dihydroxypseudooxyicotine [, ].; PDB: 3OUR_A 3MVE_B 2JBW_C.
Probab=99.04 E-value=1.6e-09 Score=74.83 Aligned_cols=100 Identities=12% Similarity=0.098 Sum_probs=64.8
Q ss_pred CEeecCCCCCHhh-HHHHHHhhh-CCceEEEecCCCCCCCcc---ch-h-hHHHHHHHHHHHhC---CCCeeEEEEchhH
Q psy1324 1 MLFLHGFPESWYI-WKHQMSEFS-HEYWTVAVDIKTNFRTIA---DR-Y-FLVDSLKVFLDHLG---RNRCILIGRDFGG 70 (115)
Q Consensus 1 vl~~hG~~~~~~~-~~~~~~~l~-~~~~v~~~d~~g~g~s~~---~~-~-~~~~~~~~~~~~~~---~~~~~lvg~S~Gg 70 (115)
||++-|.-+..+. |..+.+.+. .|+.++++|.||.|.|+. .. . ...+.+.+.+.... ..+|.++|.|+||
T Consensus 193 VIv~gGlDs~qeD~~~l~~~~l~~rGiA~LtvDmPG~G~s~~~~l~~D~~~l~~aVLd~L~~~p~VD~~RV~~~G~SfGG 272 (411)
T PF06500_consen 193 VIVCGGLDSLQEDLYRLFRDYLAPRGIAMLTVDMPGQGESPKWPLTQDSSRLHQAVLDYLASRPWVDHTRVGAWGFSFGG 272 (411)
T ss_dssp EEEE--TTS-GGGGHHHHHCCCHHCT-EEEEE--TTSGGGTTT-S-S-CCHHHHHHHHHHHHSTTEEEEEEEEEEETHHH
T ss_pred EEEeCCcchhHHHHHHHHHHHHHhCCCEEEEEccCCCcccccCCCCcCHHHHHHHHHHHHhcCCccChhheEEEEeccch
Confidence 4566666666655 444555665 599999999999998821 11 2 44445555555443 4699999999999
Q ss_pred HHHHHHHHhCcccccceEEecCCCChhHHH
Q psy1324 71 SLVWSFLDKYPELVVKSIIINVPHPAVFKQ 100 (115)
Q Consensus 71 ~~a~~~~~~~~~~v~~~v~~~~~~~~~~~~ 100 (115)
+++.+++..++++++++|..+++....+.+
T Consensus 273 y~AvRlA~le~~RlkavV~~Ga~vh~~ft~ 302 (411)
T PF06500_consen 273 YYAVRLAALEDPRLKAVVALGAPVHHFFTD 302 (411)
T ss_dssp HHHHHHHHHTTTT-SEEEEES---SCGGH-
T ss_pred HHHHHHHHhcccceeeEeeeCchHhhhhcc
Confidence 999999999999999999999987666543
No 90
>COG3319 Thioesterase domains of type I polyketide synthases or non-ribosomal peptide synthetases [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=99.03 E-value=5.6e-09 Score=68.53 Aligned_cols=95 Identities=9% Similarity=0.096 Sum_probs=79.0
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC--ccchh-hHHHHHHHHHHHhC-CCCeeEEEEchhHHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT--IADRY-FLVDSLKVFLDHLG-RNRCILIGRDFGGSLVWSF 76 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s--~~~~~-~~~~~~~~~~~~~~-~~~~~lvg~S~Gg~~a~~~ 76 (115)
++++|+..+....|..+...+.....++..+.||.+.. +.... ++++...+.|.+.. ..++++.|+|+||.+|...
T Consensus 3 LF~fhp~~G~~~~~~~L~~~l~~~~~v~~l~a~g~~~~~~~~~~l~~~a~~yv~~Ir~~QP~GPy~L~G~S~GG~vA~ev 82 (257)
T COG3319 3 LFCFHPAGGSVLAYAPLAAALGPLLPVYGLQAPGYGAGEQPFASLDDMAAAYVAAIRRVQPEGPYVLLGWSLGGAVAFEV 82 (257)
T ss_pred EEEEcCCCCcHHHHHHHHHHhccCceeeccccCcccccccccCCHHHHHHHHHHHHHHhCCCCCEEEEeeccccHHHHHH
Confidence 57899999999999999999998899999999999743 22223 67777776666664 4699999999999999999
Q ss_pred HHhC---cccccceEEecCCCC
Q psy1324 77 LDKY---PELVVKSIIINVPHP 95 (115)
Q Consensus 77 ~~~~---~~~v~~~v~~~~~~~ 95 (115)
+.+. .+.|..++++++..+
T Consensus 83 A~qL~~~G~~Va~L~llD~~~~ 104 (257)
T COG3319 83 AAQLEAQGEEVAFLGLLDAVPP 104 (257)
T ss_pred HHHHHhCCCeEEEEEEeccCCC
Confidence 9885 456999999999887
No 91
>PF10503 Esterase_phd: Esterase PHB depolymerase
Probab=99.03 E-value=4.2e-09 Score=67.79 Aligned_cols=96 Identities=14% Similarity=0.194 Sum_probs=65.0
Q ss_pred CEeecCCCCCHhhHHHH--HHhhhC--CceEEEecCCCCC-----CC--cc-chh------hHHHHHHHHHHHhC--CCC
Q psy1324 1 MLFLHGFPESWYIWKHQ--MSEFSH--EYWTVAVDIKTNF-----RT--IA-DRY------FLVDSLKVFLDHLG--RNR 60 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~--~~~l~~--~~~v~~~d~~g~g-----~s--~~-~~~------~~~~~~~~~~~~~~--~~~ 60 (115)
||++||.+++.+.+... ...+++ +|-++.|+..... +. .. ..- ...+.+..+.++.+ ..+
T Consensus 19 Vv~LHG~~~~a~~~~~~s~~~~lAd~~GfivvyP~~~~~~~~~~cw~w~~~~~~~g~~d~~~i~~lv~~v~~~~~iD~~R 98 (220)
T PF10503_consen 19 VVVLHGCGQSAEDFAAGSGWNALADREGFIVVYPEQSRRANPQGCWNWFSDDQQRGGGDVAFIAALVDYVAARYNIDPSR 98 (220)
T ss_pred EEEeCCCCCCHHHHHhhcCHHHHhhcCCeEEEcccccccCCCCCcccccccccccCccchhhHHHHHHhHhhhcccCCCc
Confidence 68999999999887653 234544 7888888754211 11 10 000 22222333333433 469
Q ss_pred eeEEEEchhHHHHHHHHHhCcccccceEEecCCCCh
Q psy1324 61 CILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHPA 96 (115)
Q Consensus 61 ~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~~ 96 (115)
|++.|+|.||.++..++..+|+++.++..+++.+..
T Consensus 99 Vyv~G~S~Gg~ma~~la~~~pd~faa~a~~sG~~~~ 134 (220)
T PF10503_consen 99 VYVTGLSNGGMMANVLACAYPDLFAAVAVVSGVPYG 134 (220)
T ss_pred eeeEEECHHHHHHHHHHHhCCccceEEEeecccccc
Confidence 999999999999999999999999999988876543
No 92
>PF05057 DUF676: Putative serine esterase (DUF676); InterPro: IPR007751 This domain, whose function is unknown, is found within a group of putative lipases.
Probab=99.03 E-value=1.2e-09 Score=70.18 Aligned_cols=98 Identities=13% Similarity=0.154 Sum_probs=59.7
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC---CceEEEecCCCCCCC---ccch---h--hHHHHHHHHHHHhCC--CCeeEEEEc
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH---EYWTVAVDIKTNFRT---IADR---Y--FLVDSLKVFLDHLGR--NRCILIGRD 67 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~---~~~v~~~d~~g~g~s---~~~~---~--~~~~~~~~~~~~~~~--~~~~lvg~S 67 (115)
||++||+.++..+|..+.+.+.. ++.--.+...+.... ..+. . ..++.+.+.++.... .++.++|||
T Consensus 7 vV~vHGL~G~~~d~~~~~~~l~~~~~~~~~~~i~~~~~~~n~~~T~~gI~~~g~rL~~eI~~~~~~~~~~~~~IsfIgHS 86 (217)
T PF05057_consen 7 VVFVHGLWGNPADMRYLKNHLEKIPEDLPNARIVVLGYSNNEFKTFDGIDVCGERLAEEILEHIKDYESKIRKISFIGHS 86 (217)
T ss_pred EEEeCCCCCCHHHHHHHHHHHHHhhhhcchhhhhhhcccccccccchhhHHHHHHHHHHHHHhccccccccccceEEEec
Confidence 68999999999999877666533 221111111111111 1111 1 556666666665554 489999999
Q ss_pred hhHHHHHHHHHhCcc------------cccceEEecCCCChhH
Q psy1324 68 FGGSLVWSFLDKYPE------------LVVKSIIINVPHPAVF 98 (115)
Q Consensus 68 ~Gg~~a~~~~~~~~~------------~v~~~v~~~~~~~~~~ 98 (115)
|||.++..++....+ .....+.+++|+....
T Consensus 87 LGGli~r~al~~~~~~~~~~~~~~~~~~~~~fitlatPH~G~~ 129 (217)
T PF05057_consen 87 LGGLIARYALGLLHDKPQYFPGFFQKIKPHNFITLATPHLGSR 129 (217)
T ss_pred ccHHHHHHHHHHhhhccccccccccceeeeeEEEeCCCCCCCc
Confidence 999999887775321 2345567788875443
No 93
>COG0400 Predicted esterase [General function prediction only]
Probab=99.02 E-value=2.8e-09 Score=67.99 Aligned_cols=98 Identities=18% Similarity=0.134 Sum_probs=71.4
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCC--CCC------ccchh----------hHHHHHHHHHHHhCC--CC
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTN--FRT------IADRY----------FLVDSLKVFLDHLGR--NR 60 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~--g~s------~~~~~----------~~~~~~~~~~~~~~~--~~ 60 (115)
||++||++++...+-+..+.+..+..++.+.-+-- +.. ....| .+.+.+....++.+. ++
T Consensus 21 iilLHG~Ggde~~~~~~~~~~~P~~~~is~rG~v~~~g~~~~f~~~~~~~~d~edl~~~~~~~~~~l~~~~~~~gi~~~~ 100 (207)
T COG0400 21 LILLHGLGGDELDLVPLPELILPNATLVSPRGPVAENGGPRFFRRYDEGSFDQEDLDLETEKLAEFLEELAEEYGIDSSR 100 (207)
T ss_pred EEEEecCCCChhhhhhhhhhcCCCCeEEcCCCCccccCcccceeecCCCccchhhHHHHHHHHHHHHHHHHHHhCCChhh
Confidence 68999999999999887777766777777632211 100 11111 444555555555565 79
Q ss_pred eeEEEEchhHHHHHHHHHhCcccccceEEecCCCChhH
Q psy1324 61 CILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHPAVF 98 (115)
Q Consensus 61 ~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~~~~ 98 (115)
++++|+|-||.+++....++|+.+++++++++..+...
T Consensus 101 ii~~GfSqGA~ial~~~l~~~~~~~~ail~~g~~~~~~ 138 (207)
T COG0400 101 IILIGFSQGANIALSLGLTLPGLFAGAILFSGMLPLEP 138 (207)
T ss_pred eEEEecChHHHHHHHHHHhCchhhccchhcCCcCCCCC
Confidence 99999999999999999999999999999997765443
No 94
>PF01674 Lipase_2: Lipase (class 2); InterPro: IPR002918 Lipases or triacylglycerol acylhydrolases hydrolyse ester bonds in triacylglycerol giving diacylglycerol, monoacylglycerol, glycerol and free fatty acids []. This group of lipases has been called class 2 as they are not clearly related to other lipase families, and includes LipA and LipB from Bacillus subtilis [] and uncharacterised proteins from Caenorhabditis.; PDB: 2VTV_B 2X76_A 2X5X_A 2QXU_A 3QMM_A 1I6W_A 3D2C_J 2QXT_B 1R50_A 1T2N_A ....
Probab=99.02 E-value=1.1e-09 Score=70.45 Aligned_cols=93 Identities=13% Similarity=0.239 Sum_probs=55.4
Q ss_pred CEeecCCCC-CHhhHHHHHHhhhC-Cce---EEEecCCCCCCCccch--h---hHHHHHHHHH----HHhCCCCeeEEEE
Q psy1324 1 MLFLHGFPE-SWYIWKHQMSEFSH-EYW---TVAVDIKTNFRTIADR--Y---FLVDSLKVFL----DHLGRNRCILIGR 66 (115)
Q Consensus 1 vl~~hG~~~-~~~~~~~~~~~l~~-~~~---v~~~d~~g~g~s~~~~--~---~~~~~~~~~~----~~~~~~~~~lvg~ 66 (115)
|||+||... ....|..+.+.|.+ ||. ++++++-.....+... . +.++++.+++ +..+. +|.+|||
T Consensus 4 VVlVHG~~~~~~~~w~~~~~~l~~~GY~~~~vya~tyg~~~~~~~~~~~~~~~~~~~~l~~fI~~Vl~~TGa-kVDIVgH 82 (219)
T PF01674_consen 4 VVLVHGTGGNAYSNWSTLAPYLKAAGYCDSEVYALTYGSGNGSPSVQNAHMSCESAKQLRAFIDAVLAYTGA-KVDIVGH 82 (219)
T ss_dssp EEEE--TTTTTCGGCCHHHHHHHHTT--CCCEEEE--S-CCHHTHHHHHHB-HHHHHHHHHHHHHHHHHHT---EEEEEE
T ss_pred EEEECCCCcchhhCHHHHHHHHHHcCCCcceeEeccCCCCCCCCcccccccchhhHHHHHHHHHHHHHhhCC-EEEEEEc
Confidence 699999998 56789999998865 888 7999875443321111 1 3334444444 44577 9999999
Q ss_pred chhHHHHHHHHHhCc-------------ccccceEEecCCC
Q psy1324 67 DFGGSLVWSFLDKYP-------------ELVVKSIIINVPH 94 (115)
Q Consensus 67 S~Gg~~a~~~~~~~~-------------~~v~~~v~~~~~~ 94 (115)
|||+.++..+++... ..+...+.+.++.
T Consensus 83 S~G~~iaR~yi~~~~~~d~~~~lg~~~~~~v~t~v~lag~n 123 (219)
T PF01674_consen 83 SMGGTIARYYIKGGGGADKVVNLGPPLTSKVGTFVGLAGAN 123 (219)
T ss_dssp TCHHHHHHHHHHHCTGGGTEEE----GGG-EEEEEEES--T
T ss_pred CCcCHHHHHHHHHcCCCCcccCccccccccccccccccccc
Confidence 999999999987542 3455566666443
No 95
>PRK10162 acetyl esterase; Provisional
Probab=99.01 E-value=4.9e-09 Score=70.90 Aligned_cols=94 Identities=12% Similarity=0.041 Sum_probs=64.7
Q ss_pred CEeecCCC---CCHhhHHHHHHhhhC--CceEEEecCCCCCCC--ccch--h-hHHHHHHHHHHHhCC--CCeeEEEEch
Q psy1324 1 MLFLHGFP---ESWYIWKHQMSEFSH--EYWTVAVDIKTNFRT--IADR--Y-FLVDSLKVFLDHLGR--NRCILIGRDF 68 (115)
Q Consensus 1 vl~~hG~~---~~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s--~~~~--~-~~~~~~~~~~~~~~~--~~~~lvg~S~ 68 (115)
||++||.+ ++.+.|+.+.+.+.. ++.|+.+|+|..... |... . ...+.+.+..+.++. ++++++|+|+
T Consensus 84 vv~~HGGg~~~g~~~~~~~~~~~la~~~g~~Vv~vdYrlape~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~Sa 163 (318)
T PRK10162 84 LFYLHGGGFILGNLDTHDRIMRLLASYSGCTVIGIDYTLSPEARFPQAIEEIVAVCCYFHQHAEDYGINMSRIGFAGDSA 163 (318)
T ss_pred EEEEeCCcccCCCchhhhHHHHHHHHHcCCEEEEecCCCCCCCCCCCcHHHHHHHHHHHHHhHHHhCCChhHEEEEEECH
Confidence 58999965 566778888888754 899999998864322 1111 0 222333333334443 5899999999
Q ss_pred hHHHHHHHHHhC------cccccceEEecCCC
Q psy1324 69 GGSLVWSFLDKY------PELVVKSIIINVPH 94 (115)
Q Consensus 69 Gg~~a~~~~~~~------~~~v~~~v~~~~~~ 94 (115)
||.+++.++.+. +.++.+++++.+..
T Consensus 164 GG~la~~~a~~~~~~~~~~~~~~~~vl~~p~~ 195 (318)
T PRK10162 164 GAMLALASALWLRDKQIDCGKVAGVLLWYGLY 195 (318)
T ss_pred HHHHHHHHHHHHHhcCCCccChhheEEECCcc
Confidence 999999988753 35688888887654
No 96
>PF12146 Hydrolase_4: Putative lysophospholipase; InterPro: IPR022742 This domain is found in bacteria and eukaryotes and is approximately 110 amino acids in length. Many members are annotated as being lysophospholipases, and others as alpha-beta hydrolase fold-containing proteins.
Probab=99.00 E-value=9e-10 Score=60.10 Aligned_cols=53 Identities=26% Similarity=0.387 Sum_probs=44.1
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCCCCCccch-----h-hHHHHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFRTIADR-----Y-FLVDSLKVFL 53 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s~~~~-----~-~~~~~~~~~~ 53 (115)
|+++||++.+...|.++++.|.+ +|.|+++|+||+|.|.... | +.++|+..++
T Consensus 19 v~i~HG~~eh~~ry~~~a~~L~~~G~~V~~~D~rGhG~S~g~rg~~~~~~~~v~D~~~~~ 78 (79)
T PF12146_consen 19 VVIVHGFGEHSGRYAHLAEFLAEQGYAVFAYDHRGHGRSEGKRGHIDSFDDYVDDLHQFI 78 (79)
T ss_pred EEEeCCcHHHHHHHHHHHHHHHhCCCEEEEECCCcCCCCCCcccccCCHHHHHHHHHHHh
Confidence 58999999999999999999976 9999999999999992211 3 6777776665
No 97
>PF05728 UPF0227: Uncharacterised protein family (UPF0227); InterPro: IPR008886 Despite being classed as uncharacterised proteins, the members of this family are almost certainly enzymes in that they contain a domain distantly related to IPR000073 from INTERPRO. One of the members of this family YqiA has been shown to be a esterase []. Other members, which include the Escherichia coli (strain K12) YcfP protein are uncharacterised.
Probab=98.97 E-value=1.2e-08 Score=64.26 Aligned_cols=86 Identities=22% Similarity=0.357 Sum_probs=61.7
Q ss_pred CEeecCCCCCHhhHHH--HHHhhhC---CceEEEecCCCCCCCccchhhHHHHHHHHHHHhCCCCeeEEEEchhHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKH--QMSEFSH---EYWTVAVDIKTNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWS 75 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~--~~~~l~~---~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~ 75 (115)
++.+||+.++....+. +.+.+.+ ...+.+++++.. |. ...+.+.+.++....+.+.++|.|+||+.|..
T Consensus 2 ilYlHGF~Ssp~S~Ka~~l~~~~~~~~~~~~~~~p~l~~~---p~---~a~~~l~~~i~~~~~~~~~liGSSlGG~~A~~ 75 (187)
T PF05728_consen 2 ILYLHGFNSSPQSFKAQALKQYFAEHGPDIQYPCPDLPPF---PE---EAIAQLEQLIEELKPENVVLIGSSLGGFYATY 75 (187)
T ss_pred eEEecCCCCCCCCHHHHHHHHHHHHhCCCceEECCCCCcC---HH---HHHHHHHHHHHhCCCCCeEEEEEChHHHHHHH
Confidence 5899999887765543 3344443 466777777644 22 45677778888877677999999999999999
Q ss_pred HHHhCcccccceEEecCCCC
Q psy1324 76 FLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 76 ~~~~~~~~v~~~v~~~~~~~ 95 (115)
++.+++ +++ |+++|...
T Consensus 76 La~~~~--~~a-vLiNPav~ 92 (187)
T PF05728_consen 76 LAERYG--LPA-VLINPAVR 92 (187)
T ss_pred HHHHhC--CCE-EEEcCCCC
Confidence 999974 444 67776653
No 98
>COG0429 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.92 E-value=1.3e-08 Score=68.35 Aligned_cols=94 Identities=18% Similarity=0.332 Sum_probs=63.9
Q ss_pred CEeecCCCCCH--hhHHHHHHhhhC-CceEEEecCCCCCCCcc--ch-h--hHHHHHHHHHHHh----CCCCeeEEEEch
Q psy1324 1 MLFLHGFPESW--YIWKHQMSEFSH-EYWTVAVDIKTNFRTIA--DR-Y--FLVDSLKVFLDHL----GRNRCILIGRDF 68 (115)
Q Consensus 1 vl~~hG~~~~~--~~~~~~~~~l~~-~~~v~~~d~~g~g~s~~--~~-~--~~~~~~~~~~~~~----~~~~~~lvg~S~ 68 (115)
||++||+.++. ..-+.+.+.+.+ +|.++++++||++.++. .. | .+.+|+..+++.+ ...+++.+|.|+
T Consensus 78 vVl~HGL~G~s~s~y~r~L~~~~~~rg~~~Vv~~~Rgcs~~~n~~p~~yh~G~t~D~~~~l~~l~~~~~~r~~~avG~SL 157 (345)
T COG0429 78 VVLFHGLEGSSNSPYARGLMRALSRRGWLVVVFHFRGCSGEANTSPRLYHSGETEDIRFFLDWLKARFPPRPLYAVGFSL 157 (345)
T ss_pred EEEEeccCCCCcCHHHHHHHHHHHhcCCeEEEEecccccCCcccCcceecccchhHHHHHHHHHHHhCCCCceEEEEecc
Confidence 58999996543 334566677754 99999999999999833 22 4 4456666666554 357899999999
Q ss_pred hHHHHHHHHHhCcc--cccceEEecCCC
Q psy1324 69 GGSLVWSFLDKYPE--LVVKSIIINVPH 94 (115)
Q Consensus 69 Gg~~a~~~~~~~~~--~v~~~v~~~~~~ 94 (115)
||.+...++.+..+ .+.+.+.++.|.
T Consensus 158 GgnmLa~ylgeeg~d~~~~aa~~vs~P~ 185 (345)
T COG0429 158 GGNMLANYLGEEGDDLPLDAAVAVSAPF 185 (345)
T ss_pred cHHHHHHHHHhhccCcccceeeeeeCHH
Confidence 99655555555433 355666555443
No 99
>PF00151 Lipase: Lipase; InterPro: IPR013818 Triglyceride lipases (3.1.1.3 from EC) are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. At least three tissue-specific isozymes exist in higher vertebrates, pancreatic, hepatic and gastric/lingual. These lipases are closely related to each other and to lipoprotein lipase (3.1.1.34 from EC), which hydrolyses triglycerides of chylomicrons and very low density lipoproteins (VLDL) []. The most conserved region in all these proteins is centred around a serine residue which has been shown [] to participate, with an histidine and an aspartic acid residue, in a charge relay system. Such a region is also present in lipases of prokaryotic origin and in lecithin-cholesterol acyltransferase (2.3.1.43 from EC) (LCAT) [], which catalyzes fatty acid transfer between phosphatidylcholine and cholesterol.; PDB: 1LPB_B 1LPA_B 1N8S_A 1GPL_A 1W52_X 2PVS_B 2OXE_B 1BU8_A 2PPL_A 1ETH_A ....
Probab=98.92 E-value=3.3e-09 Score=72.08 Aligned_cols=96 Identities=15% Similarity=0.226 Sum_probs=57.9
Q ss_pred CEeecCCCCCH--hhH-HHHHHh-hh---CCceEEEecCCCCCCC--ccch--h-----hHHHHHHHHHHHh--CCCCee
Q psy1324 1 MLFLHGFPESW--YIW-KHQMSE-FS---HEYWTVAVDIKTNFRT--IADR--Y-----FLVDSLKVFLDHL--GRNRCI 62 (115)
Q Consensus 1 vl~~hG~~~~~--~~~-~~~~~~-l~---~~~~v~~~d~~g~g~s--~~~~--~-----~~~~~~~~~~~~~--~~~~~~ 62 (115)
+|++||+..+. +.| ..+.+. +. +++.|+++||...... .... . ..++.+..+.+.. ..++++
T Consensus 74 ~iiiHGw~~~~~~~~~~~~~~~all~~~~~d~NVI~VDWs~~a~~~Y~~a~~n~~~vg~~la~~l~~L~~~~g~~~~~ih 153 (331)
T PF00151_consen 74 VIIIHGWTGSGSSESWIQDMIKALLQKDTGDYNVIVVDWSRGASNNYPQAVANTRLVGRQLAKFLSFLINNFGVPPENIH 153 (331)
T ss_dssp EEEE--TT-TT-TTTHHHHHHHHHHCC--S-EEEEEEE-HHHHSS-HHHHHHHHHHHHHHHHHHHHHHHHHH---GGGEE
T ss_pred EEEEcCcCCcccchhHHHHHHHHHHhhccCCceEEEEcchhhccccccchhhhHHHHHHHHHHHHHHHHhhcCCChhHEE
Confidence 48999998776 345 344443 33 4899999998744322 1100 1 2222233333233 357999
Q ss_pred EEEEchhHHHHHHHHHhCcc--cccceEEecCCCCh
Q psy1324 63 LIGRDFGGSLVWSFLDKYPE--LVVKSIIINVPHPA 96 (115)
Q Consensus 63 lvg~S~Gg~~a~~~~~~~~~--~v~~~v~~~~~~~~ 96 (115)
++|||+||.+|-.+...... ++.++.-++|..|.
T Consensus 154 lIGhSLGAHvaG~aG~~~~~~~ki~rItgLDPAgP~ 189 (331)
T PF00151_consen 154 LIGHSLGAHVAGFAGKYLKGGGKIGRITGLDPAGPL 189 (331)
T ss_dssp EEEETCHHHHHHHHHHHTTT---SSEEEEES-B-TT
T ss_pred EEeeccchhhhhhhhhhccCcceeeEEEecCccccc
Confidence 99999999999999999877 89999999987764
No 100
>PF06028 DUF915: Alpha/beta hydrolase of unknown function (DUF915); InterPro: IPR010315 This family consists of bacterial proteins of unknown function, which are hydrolase-like.; PDB: 3LP5_A 3FLE_A 3DS8_A.
Probab=98.92 E-value=4.1e-09 Score=69.19 Aligned_cols=97 Identities=20% Similarity=0.290 Sum_probs=60.9
Q ss_pred CEeecCCCCCHhhHHHHHHhhh-C-C--ceEEEe--cCCCC----C------CCccc----------hh-hHHHHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFS-H-E--YWTVAV--DIKTN----F------RTIAD----------RY-FLVDSLKVFL 53 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~-~-~--~~v~~~--d~~g~----g------~s~~~----------~~-~~~~~~~~~~ 53 (115)
.||+||++++...+..+++.+. + + -.++.+ +.-|. | ..|.- .+ .+++.+..++
T Consensus 14 TifihG~~gt~~s~~~mi~~~~~~~~~~~~~l~v~V~~~G~v~~~G~~~~~~~nPiIqV~F~~n~~~~~~~qa~wl~~vl 93 (255)
T PF06028_consen 14 TIFIHGYGGTANSFNHMINRLENKQGVAQKVLTVTVSKNGKVKVSGKLSKNAKNPIIQVNFEDNRNANYKKQAKWLKKVL 93 (255)
T ss_dssp EEEE--TTGGCCCCHHHHHHHHHCSTS-S-EEEEEEETTSEEEEES---TT-SS-EEEEEESSTT-CHHHHHHHHHHHHH
T ss_pred EEEECCCCCChhHHHHHHHHHHhhcCCCceEEEEEECCCCeEEEeeecCCCCCCCEEEEEecCCCcCCHHHHHHHHHHHH
Confidence 4899999999999999999886 4 2 333332 22221 1 11111 12 3455555555
Q ss_pred HHh----CCCCeeEEEEchhHHHHHHHHHhCcc-----cccceEEecCCCChh
Q psy1324 54 DHL----GRNRCILIGRDFGGSLVWSFLDKYPE-----LVVKSIIINVPHPAV 97 (115)
Q Consensus 54 ~~~----~~~~~~lvg~S~Gg~~a~~~~~~~~~-----~v~~~v~~~~~~~~~ 97 (115)
..+ +++++.+|||||||..+..++..+.. .+.++|.+++|....
T Consensus 94 ~~L~~~Y~~~~~N~VGHSmGg~~~~~yl~~~~~~~~~P~l~K~V~Ia~pfng~ 146 (255)
T PF06028_consen 94 KYLKKKYHFKKFNLVGHSMGGLSWTYYLENYGNDKNLPKLNKLVTIAGPFNGI 146 (255)
T ss_dssp HHHHHCC--SEEEEEEETHHHHHHHHHHHHCTTGTTS-EEEEEEEES--TTTT
T ss_pred HHHHHhcCCCEEeEEEECccHHHHHHHHHHhccCCCCcccceEEEeccccCcc
Confidence 444 67899999999999999999998642 489999999887544
No 101
>PF00326 Peptidase_S9: Prolyl oligopeptidase family This family belongs to family S9 of the peptidase classification.; InterPro: IPR001375 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This domain covers the active site serine of the serine peptidases belonging to MEROPS peptidase family S9 (prolyl oligopeptidase family, clan SC). The protein fold of the peptidase domain for members of this family resembles that of serine carboxypeptidase D, the type example of clan SC. Examples of protein families containing this domain are: Prolyl endopeptidase (3.4.21.26 from EC) (PE) (also called post-proline cleaving enzyme). PE is an enzyme that cleaves peptide bonds on the C-terminal side of prolyl residues. The sequence of PE has been obtained from a mammalian species (pig) and from bacteria (Flavobacterium meningosepticum and Aeromonas hydrophila); there is a high degree of sequence conservation between these sequences. Escherichia coli protease II (3.4.21.83 from EC) (oligopeptidase B) (gene prtB) which cleaves peptide bonds on the C-terminal side of lysyl and argininyl residues. Dipeptidyl peptidase IV (3.4.14.5 from EC) (DPP IV). DPP IV is an enzyme that removes N-terminal dipeptides sequentially from polypeptides having unsubstituted N-termini provided that the penultimate residue is proline. Saccharomyces cerevisiae (Baker's yeast) vacuolar dipeptidyl aminopeptidases A and B (DPAP A and DPAP B), encoded by the STE13 and DAP2 genes respectively. DPAP A is responsible for the proteolytic maturation of the alpha-factor precursor. Acylamino-acid-releasing enzyme (3.4.19.1 from EC) (acyl-peptide hydrolase). This enzyme catalyses the hydrolysis of the amino-terminal peptide bond of an N-acetylated protein to generate a N-acetylated amino acid and a protein with a free amino-terminus. These proteins belong to MEROPS peptidase families S9A, S9B and S9C.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 2AJ8_D 1ORV_D 2AJB_C 2BUC_D 1ORW_D 2AJC_D 2AJD_C 2BUA_A 2HU8_B 3O4J_B ....
Probab=98.90 E-value=9.9e-09 Score=65.46 Aligned_cols=79 Identities=13% Similarity=0.174 Sum_probs=56.4
Q ss_pred HHHHhhh-CCceEEEecCCCCCCC---ccc----hh--hHHHHHHHHHHHh------CCCCeeEEEEchhHHHHHHHHHh
Q psy1324 16 HQMSEFS-HEYWTVAVDIKTNFRT---IAD----RY--FLVDSLKVFLDHL------GRNRCILIGRDFGGSLVWSFLDK 79 (115)
Q Consensus 16 ~~~~~l~-~~~~v~~~d~~g~g~s---~~~----~~--~~~~~~~~~~~~~------~~~~~~lvg~S~Gg~~a~~~~~~ 79 (115)
.....|+ .||.|+.+|.||.+.. ... .+ ...+|+.+.++.+ +.+++.++|+|+||.++..++.+
T Consensus 5 ~~~~~la~~Gy~v~~~~~rGs~g~g~~~~~~~~~~~~~~~~~D~~~~i~~l~~~~~iD~~ri~i~G~S~GG~~a~~~~~~ 84 (213)
T PF00326_consen 5 WNAQLLASQGYAVLVPNYRGSGGYGKDFHEAGRGDWGQADVDDVVAAIEYLIKQYYIDPDRIGIMGHSYGGYLALLAATQ 84 (213)
T ss_dssp HHHHHHHTTT-EEEEEE-TTSSSSHHHHHHTTTTGTTHHHHHHHHHHHHHHHHTTSEEEEEEEEEEETHHHHHHHHHHHH
T ss_pred HHHHHHHhCCEEEEEEcCCCCCccchhHHHhhhccccccchhhHHHHHHHHhccccccceeEEEEcccccccccchhhcc
Confidence 4455664 4999999999988754 111 11 4455565555554 23689999999999999999999
Q ss_pred CcccccceEEecCCC
Q psy1324 80 YPELVVKSIIINVPH 94 (115)
Q Consensus 80 ~~~~v~~~v~~~~~~ 94 (115)
+|+++++++..++..
T Consensus 85 ~~~~f~a~v~~~g~~ 99 (213)
T PF00326_consen 85 HPDRFKAAVAGAGVS 99 (213)
T ss_dssp TCCGSSEEEEESE-S
T ss_pred cceeeeeeeccceec
Confidence 999999999888654
No 102
>COG1075 LipA Predicted acetyltransferases and hydrolases with the alpha/beta hydrolase fold [General function prediction only]
Probab=98.90 E-value=6.6e-09 Score=70.82 Aligned_cols=100 Identities=16% Similarity=0.198 Sum_probs=77.4
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-Cce---EEEecCCCCCCC-ccch-h-hHHHHHHHHHHHhCCCCeeEEEEchhHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYW---TVAVDIKTNFRT-IADR-Y-FLVDSLKVFLDHLGRNRCILIGRDFGGSLV 73 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~---v~~~d~~g~g~s-~~~~-~-~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a 73 (115)
++++||+..+...|..+...+.. ++. ++.++.++.... +... - ...+.+.+++...+.+++.++||||||..+
T Consensus 62 ivlVhG~~~~~~~~~~~~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ql~~~V~~~l~~~ga~~v~LigHS~GG~~~ 141 (336)
T COG1075 62 IVLVHGLGGGYGNFLPLDYRLAILGWLTNGVYAFELSGGDGTYSLAVRGEQLFAYVDEVLAKTGAKKVNLIGHSMGGLDS 141 (336)
T ss_pred EEEEccCcCCcchhhhhhhhhcchHHHhcccccccccccCCCccccccHHHHHHHHHHHHhhcCCCceEEEeecccchhh
Confidence 58999998888889888877765 666 888887755222 1111 1 566667777777788999999999999999
Q ss_pred HHHHHhCc--ccccceEEecCCCChhHHH
Q psy1324 74 WSFLDKYP--ELVVKSIIINVPHPAVFKQ 100 (115)
Q Consensus 74 ~~~~~~~~--~~v~~~v~~~~~~~~~~~~ 100 (115)
+.++...+ .+|+.++.++++.......
T Consensus 142 ry~~~~~~~~~~V~~~~tl~tp~~Gt~~~ 170 (336)
T COG1075 142 RYYLGVLGGANRVASVVTLGTPHHGTELA 170 (336)
T ss_pred HHHHhhcCccceEEEEEEeccCCCCchhh
Confidence 99999988 8899999999987655443
No 103
>PF05990 DUF900: Alpha/beta hydrolase of unknown function (DUF900); InterPro: IPR010297 This domain is associated with proteins of unknown function, which are hydrolase-like.
Probab=98.89 E-value=4.5e-08 Score=63.65 Aligned_cols=98 Identities=15% Similarity=0.204 Sum_probs=63.4
Q ss_pred CEeecCCCCCHhhHHHHHHhh----hCCceEEEecCCCCCCC---ccch---hhHHHHHHHHHHH----hCCCCeeEEEE
Q psy1324 1 MLFLHGFPESWYIWKHQMSEF----SHEYWTVAVDIKTNFRT---IADR---YFLVDSLKVFLDH----LGRNRCILIGR 66 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l----~~~~~v~~~d~~g~g~s---~~~~---~~~~~~~~~~~~~----~~~~~~~lvg~ 66 (115)
+||+||+..+-+.--....++ .-...++.+.||..|.. ..+. ..-...+.++++. .+.+++++++|
T Consensus 21 lvfVHGyn~~f~~a~~r~aql~~~~~~~~~~i~FsWPS~g~~~~Y~~d~~~a~~s~~~l~~~L~~L~~~~~~~~I~ilaH 100 (233)
T PF05990_consen 21 LVFVHGYNNSFEDALRRAAQLAHDLGFPGVVILFSWPSDGSLLGYFYDRESARFSGPALARFLRDLARAPGIKRIHILAH 100 (233)
T ss_pred EEEEeCCCCCHHHHHHHHHHHHHHhCCCceEEEEEcCCCCChhhhhhhhhhHHHHHHHHHHHHHHHHhccCCceEEEEEe
Confidence 589999988755432222222 22347899999987654 1111 1223333334433 35689999999
Q ss_pred chhHHHHHHHHHhC----c-----ccccceEEecCCCChhH
Q psy1324 67 DFGGSLVWSFLDKY----P-----ELVVKSIIINVPHPAVF 98 (115)
Q Consensus 67 S~Gg~~a~~~~~~~----~-----~~v~~~v~~~~~~~~~~ 98 (115)
|||+.+....+... + .++..+++++|..+...
T Consensus 101 SMG~rv~~~aL~~l~~~~~~~~~~~~~~~viL~ApDid~d~ 141 (233)
T PF05990_consen 101 SMGNRVLLEALRQLASEGERPDVKARFDNVILAAPDIDNDV 141 (233)
T ss_pred CchHHHHHHHHHHHHhcccchhhHhhhheEEEECCCCCHHH
Confidence 99999988887763 1 25788999988876654
No 104
>KOG4667|consensus
Probab=98.85 E-value=3.3e-08 Score=63.02 Aligned_cols=93 Identities=19% Similarity=0.307 Sum_probs=72.9
Q ss_pred CEeecCCCCCHh--hHHHHHHhhhC-CceEEEecCCCCCCCccc----hh-hHHHHHHHHHHHhCCC-C--eeEEEEchh
Q psy1324 1 MLFLHGFPESWY--IWKHQMSEFSH-EYWTVAVDIKTNFRTIAD----RY-FLVDSLKVFLDHLGRN-R--CILIGRDFG 69 (115)
Q Consensus 1 vl~~hG~~~~~~--~~~~~~~~l~~-~~~v~~~d~~g~g~s~~~----~~-~~~~~~~~~~~~~~~~-~--~~lvg~S~G 69 (115)
+|++||+-.+.. ....++..+.+ ++.++.+|.+|.|.|... .| ..++++..+++.+... + .+++|||-|
T Consensus 36 vvlcHGfrS~Kn~~~~~~vA~~~e~~gis~fRfDF~GnGeS~gsf~~Gn~~~eadDL~sV~q~~s~~nr~v~vi~gHSkG 115 (269)
T KOG4667|consen 36 VVLCHGFRSHKNAIIMKNVAKALEKEGISAFRFDFSGNGESEGSFYYGNYNTEADDLHSVIQYFSNSNRVVPVILGHSKG 115 (269)
T ss_pred EEEeeccccccchHHHHHHHHHHHhcCceEEEEEecCCCCcCCccccCcccchHHHHHHHHHHhccCceEEEEEEeecCc
Confidence 589999987653 45667777766 999999999999999211 13 7789999999998643 2 257999999
Q ss_pred HHHHHHHHHhCcccccceEEecCCC
Q psy1324 70 GSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 70 g~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
|-++..++.++.+ ++-+|.+++..
T Consensus 116 g~Vvl~ya~K~~d-~~~viNcsGRy 139 (269)
T KOG4667|consen 116 GDVVLLYASKYHD-IRNVINCSGRY 139 (269)
T ss_pred cHHHHHHHHhhcC-chheEEccccc
Confidence 9999999999977 77777766654
No 105
>PF07859 Abhydrolase_3: alpha/beta hydrolase fold A web page of Esterases and alpha/beta hydrolases.; InterPro: IPR013094 The alpha/beta hydrolase fold [] is common to a number of hydrolytic enzymes of widely differing phylogenetic origin and catalytic function. The core of each enzyme is an alpha/beta-sheet (rather than a barrel), containing 8 strands connected by helices []. The enzymes are believed to have diverged from a common ancestor, preserving the arrangement of the catalytic residues. All have a catalytic triad, the elements of which are borne on loops, which are the best conserved structural features of the fold. Esterase (EST) from Pseudomonas putida is a member of the alpha/beta hydrolase fold superfamily of enzymes []. In most of the family members the beta-strands are parallels, but some have an inversion of the first strands, which gives it an antiparallel orientation. The catalytic triad residues are presented on loops. One of these is the nucleophile elbow and is the most conserved feature of the fold. Some other members lack one or all of the catalytic residues. Some members are therefore inactive but others are involved in surface recognition. The ESTHER database [] gathers and annotates all the published information related to gene and protein sequences of this superfamily []. This entry represents the catalytic domain fold-3 of alpha/beta hydrolase. ; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 3D7R_B 2C7B_B 3ZWQ_B 2YH2_B 3BXP_A 3D3N_A 1LZK_A 1LZL_A 2O7V_A 2O7R_A ....
Probab=98.83 E-value=1.4e-08 Score=64.51 Aligned_cols=94 Identities=17% Similarity=0.188 Sum_probs=57.2
Q ss_pred CEeecCCC---CCHhhHHHHHHhhh--CCceEEEecCCCCCCCccch-h-hHHHHHHHHHHH-----hCCCCeeEEEEch
Q psy1324 1 MLFLHGFP---ESWYIWKHQMSEFS--HEYWTVAVDIKTNFRTIADR-Y-FLVDSLKVFLDH-----LGRNRCILIGRDF 68 (115)
Q Consensus 1 vl~~hG~~---~~~~~~~~~~~~l~--~~~~v~~~d~~g~g~s~~~~-~-~~~~~~~~~~~~-----~~~~~~~lvg~S~ 68 (115)
||++||.+ ++.+....+...+. .++.|+.+|+|-.-..+-.. . +..+.+..+++. .+.++++++|+|.
T Consensus 1 v~~~HGGg~~~g~~~~~~~~~~~la~~~g~~v~~~~Yrl~p~~~~p~~~~D~~~a~~~l~~~~~~~~~d~~~i~l~G~SA 80 (211)
T PF07859_consen 1 VVYIHGGGWVMGSKESHWPFAARLAAERGFVVVSIDYRLAPEAPFPAALEDVKAAYRWLLKNADKLGIDPERIVLIGDSA 80 (211)
T ss_dssp EEEE--STTTSCGTTTHHHHHHHHHHHHTSEEEEEE---TTTSSTTHHHHHHHHHHHHHHHTHHHHTEEEEEEEEEEETH
T ss_pred CEEECCcccccCChHHHHHHHHHHHhhccEEEEEeeccccccccccccccccccceeeeccccccccccccceEEeeccc
Confidence 68999885 34444455555554 39999999998542221111 1 222233333333 2346999999999
Q ss_pred hHHHHHHHHHhCcc----cccceEEecCCC
Q psy1324 69 GGSLVWSFLDKYPE----LVVKSIIINVPH 94 (115)
Q Consensus 69 Gg~~a~~~~~~~~~----~v~~~v~~~~~~ 94 (115)
||.+++.++....+ .+++++++++..
T Consensus 81 Gg~la~~~~~~~~~~~~~~~~~~~~~~p~~ 110 (211)
T PF07859_consen 81 GGHLALSLALRARDRGLPKPKGIILISPWT 110 (211)
T ss_dssp HHHHHHHHHHHHHHTTTCHESEEEEESCHS
T ss_pred ccchhhhhhhhhhhhcccchhhhhcccccc
Confidence 99999999987544 388899888864
No 106
>TIGR01839 PHA_synth_II poly(R)-hydroxyalkanoic acid synthase, class II. This model represents the class II subfamily of poly(R)-hydroxyalkanoate synthases, which polymerizes hydroxyacyl-CoAs, typically with six to fourteen carbons in the hydroxyacyl backbone into aliphatic esters termed poly(R)-hydroxyalkanoic acids. These polymers accumulate as carbon and energy storage inclusions in many species and can amount to 90 percent of the dry weight of cell.
Probab=98.83 E-value=2.5e-08 Score=71.49 Aligned_cols=95 Identities=16% Similarity=0.081 Sum_probs=66.0
Q ss_pred CEeecCCCCCHhhH-----HHHHHhhh-CCceEEEecCCCCCCC-ccchh-hHHHHHHHHHH----HhCCCCeeEEEEch
Q psy1324 1 MLFLHGFPESWYIW-----KHQMSEFS-HEYWTVAVDIKTNFRT-IADRY-FLVDSLKVFLD----HLGRNRCILIGRDF 68 (115)
Q Consensus 1 vl~~hG~~~~~~~~-----~~~~~~l~-~~~~v~~~d~~g~g~s-~~~~~-~~~~~~~~~~~----~~~~~~~~lvg~S~ 68 (115)
||+++.+-.-.+.+ +.+++.+. +|+.|+.+|+++-+.. ..-.+ ++++.+.+.++ ..+.+++.++|+|+
T Consensus 218 LLIVPp~INK~YIlDL~P~~SlVr~lv~qG~~VflIsW~nP~~~~r~~~ldDYv~~i~~Ald~V~~~tG~~~vnl~GyC~ 297 (560)
T TIGR01839 218 LLVVPPQINKFYIFDLSPEKSFVQYCLKNQLQVFIISWRNPDKAHREWGLSTYVDALKEAVDAVRAITGSRDLNLLGACA 297 (560)
T ss_pred EEEechhhhhhheeecCCcchHHHHHHHcCCeEEEEeCCCCChhhcCCCHHHHHHHHHHHHHHHHHhcCCCCeeEEEECc
Confidence 45666665444444 46777775 5999999999886655 11112 33334444443 34678999999999
Q ss_pred hHHHHHH----HHHhCcc-cccceEEecCCCC
Q psy1324 69 GGSLVWS----FLDKYPE-LVVKSIIINVPHP 95 (115)
Q Consensus 69 Gg~~a~~----~~~~~~~-~v~~~v~~~~~~~ 95 (115)
||.++.. +++++++ +|+.++++.++..
T Consensus 298 GGtl~a~~~a~~aA~~~~~~V~sltllatplD 329 (560)
T TIGR01839 298 GGLTCAALVGHLQALGQLRKVNSLTYLVSLLD 329 (560)
T ss_pred chHHHHHHHHHHHhcCCCCceeeEEeeecccc
Confidence 9999987 7888885 7999999987654
No 107
>smart00824 PKS_TE Thioesterase. Peptide synthetases are involved in the non-ribosomal synthesis of peptide antibiotics. Next to the operons encoding these enzymes, in almost all cases, are genes that encode proteins that have similarity to the type II fatty acid thioesterases of vertebrates. There are also modules within the peptide synthetases that also share this similarity. With respect to antibiotic production, thioesterases are required for the addition of the last amino acid to the peptide antibiotic, thereby forming a cyclic antibiotic. Thioesterases (non-integrated) have molecular masses of 25-29 kDa.
Probab=98.83 E-value=1.5e-07 Score=59.13 Aligned_cols=94 Identities=11% Similarity=0.045 Sum_probs=68.1
Q ss_pred eecCCC--CCHhhHHHHHHhhhCCceEEEecCCCCCCC-ccch-h-hHHHHHHHHHH-HhCCCCeeEEEEchhHHHHHHH
Q psy1324 3 FLHGFP--ESWYIWKHQMSEFSHEYWTVAVDIKTNFRT-IADR-Y-FLVDSLKVFLD-HLGRNRCILIGRDFGGSLVWSF 76 (115)
Q Consensus 3 ~~hG~~--~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s-~~~~-~-~~~~~~~~~~~-~~~~~~~~lvg~S~Gg~~a~~~ 76 (115)
++|+.+ ++...|..+...+...+.+++++.+|++.+ +... . ..++.+...+. .....++.++|||+||.++...
T Consensus 2 ~~~~~~~~~~~~~~~~~~~~l~~~~~v~~~~~~g~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~l~g~s~Gg~~a~~~ 81 (212)
T smart00824 2 CFPSTAAPSGPHEYARLAAALRGRRDVSALPLPGFGPGEPLPASADALVEAQAEAVLRAAGGRPFVLVGHSSGGLLAHAV 81 (212)
T ss_pred ccCCCCCCCcHHHHHHHHHhcCCCccEEEecCCCCCCCCCCCCCHHHHHHHHHHHHHHhcCCCCeEEEEECHHHHHHHHH
Confidence 456544 677889999999988899999999999766 2222 2 44444443333 3445789999999999999888
Q ss_pred HHhC---cccccceEEecCCCCh
Q psy1324 77 LDKY---PELVVKSIIINVPHPA 96 (115)
Q Consensus 77 ~~~~---~~~v~~~v~~~~~~~~ 96 (115)
+.+. ++.+.+++++++..+.
T Consensus 82 a~~l~~~~~~~~~l~~~~~~~~~ 104 (212)
T smart00824 82 AARLEARGIPPAAVVLLDTYPPG 104 (212)
T ss_pred HHHHHhCCCCCcEEEEEccCCCC
Confidence 8863 4568889888765543
No 108
>COG3545 Predicted esterase of the alpha/beta hydrolase fold [General function prediction only]
Probab=98.76 E-value=1.2e-07 Score=58.51 Aligned_cols=91 Identities=12% Similarity=0.188 Sum_probs=62.9
Q ss_pred CEeecCCCCCH-hhHHHHHHhhhCCceEEEecCCCCCCCccchh-hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHH
Q psy1324 1 MLFLHGFPESW-YIWKHQMSEFSHEYWTVAVDIKTNFRTIADRY-FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLD 78 (115)
Q Consensus 1 vl~~hG~~~~~-~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~-~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~ 78 (115)
+|.+||+.++. ..|+...+.--.+ +-.++++.-.. |. + +|++.+.+.++.. .+++++|+||+|+..+.+++.
T Consensus 5 ~lIVpG~~~Sg~~HWq~~we~~l~~--a~rveq~~w~~-P~--~~dWi~~l~~~v~a~-~~~~vlVAHSLGc~~v~h~~~ 78 (181)
T COG3545 5 VLIVPGYGGSGPNHWQSRWESALPN--ARRVEQDDWEA-PV--LDDWIARLEKEVNAA-EGPVVLVAHSLGCATVAHWAE 78 (181)
T ss_pred EEEecCCCCCChhHHHHHHHhhCcc--chhcccCCCCC-CC--HHHHHHHHHHHHhcc-CCCeEEEEecccHHHHHHHHH
Confidence 57899997654 5587665432112 22222222111 11 2 7777777777666 366999999999999999999
Q ss_pred hCcccccceEEecCCCChh
Q psy1324 79 KYPELVVKSIIINVPHPAV 97 (115)
Q Consensus 79 ~~~~~v~~~v~~~~~~~~~ 97 (115)
+....|+|+++++++....
T Consensus 79 ~~~~~V~GalLVAppd~~~ 97 (181)
T COG3545 79 HIQRQVAGALLVAPPDVSR 97 (181)
T ss_pred hhhhccceEEEecCCCccc
Confidence 9888999999999886443
No 109
>COG3509 LpqC Poly(3-hydroxybutyrate) depolymerase [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.73 E-value=1.1e-07 Score=62.98 Aligned_cols=94 Identities=19% Similarity=0.199 Sum_probs=69.1
Q ss_pred CEeecCCCCCHhhHHHHH--HhhhC--CceEEEecCCCC-------CCC--ccch---h----hHHHHHHHHHHHhCCC-
Q psy1324 1 MLFLHGFPESWYIWKHQM--SEFSH--EYWTVAVDIKTN-------FRT--IADR---Y----FLVDSLKVFLDHLGRN- 59 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~--~~l~~--~~~v~~~d~~g~-------g~s--~~~~---~----~~~~~~~~~~~~~~~~- 59 (115)
||++||..++..-+++.. +.+++ +|-|.++|-... +.+ |.+. . .+.+.+..+..+.+.+
T Consensus 64 vv~LHG~~~sgag~~~~sg~d~lAd~~gFlV~yPdg~~~~wn~~~~~~~~~p~~~~~g~ddVgflr~lva~l~~~~gidp 143 (312)
T COG3509 64 VVVLHGSGGSGAGQLHGTGWDALADREGFLVAYPDGYDRAWNANGCGNWFGPADRRRGVDDVGFLRALVAKLVNEYGIDP 143 (312)
T ss_pred EEEEecCCCChHHhhcccchhhhhcccCcEEECcCccccccCCCcccccCCcccccCCccHHHHHHHHHHHHHHhcCcCc
Confidence 689999999998887765 56654 899999853322 222 3321 1 3444445555555654
Q ss_pred -CeeEEEEchhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 60 -RCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 60 -~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
+|++.|.|-||.++..+++.+|+.+.++..+.+..
T Consensus 144 ~RVyvtGlS~GG~Ma~~lac~~p~~faa~A~VAg~~ 179 (312)
T COG3509 144 ARVYVTGLSNGGRMANRLACEYPDIFAAIAPVAGLL 179 (312)
T ss_pred ceEEEEeeCcHHHHHHHHHhcCcccccceeeeeccc
Confidence 99999999999999999999999999988888766
No 110
>PF07224 Chlorophyllase: Chlorophyllase; InterPro: IPR010821 This family consists of several chlorophyllase proteins (3.1.1.14 from EC). Chlorophyllase (Chlase) is the first enzyme involved in chlorophyll degradation and catalyses the hydrolysis of the ester bond to yield chlorophyllide and phytol [, , ].; GO: 0047746 chlorophyllase activity, 0015996 chlorophyll catabolic process
Probab=98.72 E-value=6.5e-08 Score=63.28 Aligned_cols=93 Identities=22% Similarity=0.288 Sum_probs=67.1
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCCCCCccch----h--hHHHHHHHHHHHh-------CCCCeeEEEE
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFRTIADR----Y--FLVDSLKVFLDHL-------GRNRCILIGR 66 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s~~~~----~--~~~~~~~~~~~~~-------~~~~~~lvg~ 66 (115)
|+|+||+.-..+.|..+...++. ||-++++++...... ... . +..+++.+-++.+ +..++.++||
T Consensus 49 ilF~HG~~l~ns~Ys~lL~HIASHGfIVVAPQl~~~~~p-~~~~Ei~~aa~V~~WL~~gL~~~Lp~~V~~nl~klal~GH 127 (307)
T PF07224_consen 49 ILFLHGFNLYNSFYSQLLAHIASHGFIVVAPQLYTLFPP-DGQDEIKSAASVINWLPEGLQHVLPENVEANLSKLALSGH 127 (307)
T ss_pred EEEeechhhhhHHHHHHHHHHhhcCeEEEechhhcccCC-CchHHHHHHHHHHHHHHhhhhhhCCCCcccccceEEEeec
Confidence 58999999999999999999876 999999998754222 211 1 3333343333333 2358999999
Q ss_pred chhHHHHHHHHHhCc--ccccceEEecCCC
Q psy1324 67 DFGGSLVWSFLDKYP--ELVVKSIIINVPH 94 (115)
Q Consensus 67 S~Gg~~a~~~~~~~~--~~v~~~v~~~~~~ 94 (115)
|.||-.|..++..+. -.+.++|-+++-.
T Consensus 128 SrGGktAFAlALg~a~~lkfsaLIGiDPV~ 157 (307)
T PF07224_consen 128 SRGGKTAFALALGYATSLKFSALIGIDPVA 157 (307)
T ss_pred CCccHHHHHHHhcccccCchhheecccccC
Confidence 999999999999874 2377888777553
No 111
>COG1506 DAP2 Dipeptidyl aminopeptidases/acylaminoacyl-peptidases [Amino acid transport and metabolism]
Probab=98.69 E-value=6.2e-08 Score=70.88 Aligned_cols=92 Identities=16% Similarity=0.282 Sum_probs=62.1
Q ss_pred CEeecCCCCCHhh--HHHHHHhhhC-CceEEEecCCCCCCC-------ccchh--hHHHHHHHHHH---HhC---CCCee
Q psy1324 1 MLFLHGFPESWYI--WKHQMSEFSH-EYWTVAVDIKTNFRT-------IADRY--FLVDSLKVFLD---HLG---RNRCI 62 (115)
Q Consensus 1 vl~~hG~~~~~~~--~~~~~~~l~~-~~~v~~~d~~g~g~s-------~~~~~--~~~~~~~~~~~---~~~---~~~~~ 62 (115)
||++||.+..... |....+.+.. +|.|+.++.||.+.. ....+ ...+++.+.++ +.+ .+++.
T Consensus 397 i~~~hGGP~~~~~~~~~~~~q~~~~~G~~V~~~n~RGS~GyG~~F~~~~~~~~g~~~~~D~~~~~~~l~~~~~~d~~ri~ 476 (620)
T COG1506 397 IVYIHGGPSAQVGYSFNPEIQVLASAGYAVLAPNYRGSTGYGREFADAIRGDWGGVDLEDLIAAVDALVKLPLVDPERIG 476 (620)
T ss_pred EEEeCCCCccccccccchhhHHHhcCCeEEEEeCCCCCCccHHHHHHhhhhccCCccHHHHHHHHHHHHhCCCcChHHeE
Confidence 5899999755444 5566666655 999999999976442 11112 33444444443 433 25899
Q ss_pred EEEEchhHHHHHHHHHhCcccccceEEecCC
Q psy1324 63 LIGRDFGGSLVWSFLDKYPELVVKSIIINVP 93 (115)
Q Consensus 63 lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~ 93 (115)
++|+|+||++++..+.+.| ++++.+...+.
T Consensus 477 i~G~SyGGymtl~~~~~~~-~f~a~~~~~~~ 506 (620)
T COG1506 477 ITGGSYGGYMTLLAATKTP-RFKAAVAVAGG 506 (620)
T ss_pred EeccChHHHHHHHHHhcCc-hhheEEeccCc
Confidence 9999999999999999998 45555544443
No 112
>PF01738 DLH: Dienelactone hydrolase family; InterPro: IPR002925 Dienelactone hydrolases play a crucial role in chlorocatechol degradation via the modified ortho cleavage pathway. Enzymes induced in 4-fluorobenzoate-utilizing bacteria have been classified into three groups on the basis of their specificity towards cis- and trans-dienelactone []. Some proteins contain repeated small fragments of this domain (for example rat kan-1 protein).; GO: 0016787 hydrolase activity; PDB: 1GGV_A 1ZIY_A 1ZI6_A 1ZIC_A 1ZJ5_A 1ZI8_A 1ZJ4_A 1ZI9_A 1ZIX_A 3F67_A.
Probab=98.69 E-value=1.4e-07 Score=60.48 Aligned_cols=91 Identities=13% Similarity=0.119 Sum_probs=61.9
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCCCC-C---ccch---h---------hHHHHHHHHHHHh---C---
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFR-T---IADR---Y---------FLVDSLKVFLDHL---G--- 57 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~-s---~~~~---~---------~~~~~~~~~~~~~---~--- 57 (115)
||++|++.+-....+.+.+.|++ ||.|++||+.+-.. . +... + ...+++...++.+ .
T Consensus 17 Vvv~~d~~G~~~~~~~~ad~lA~~Gy~v~~pD~f~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~aa~~~l~~~~~~~ 96 (218)
T PF01738_consen 17 VVVIHDIFGLNPNIRDLADRLAEEGYVVLAPDLFGGRGAPPSDPEEAFAAMRELFAPRPEQVAADLQAAVDYLRAQPEVD 96 (218)
T ss_dssp EEEE-BTTBS-HHHHHHHHHHHHTT-EEEEE-CCCCTS--CCCHHCHHHHHHHCHHHSHHHHHHHHHHHHHHHHCTTTCE
T ss_pred EEEEcCCCCCchHHHHHHHHHHhcCCCEEecccccCCCCCccchhhHHHHHHHHHhhhHHHHHHHHHHHHHHHHhccccC
Confidence 68999998888888888898865 99999999875544 1 1111 1 1234444444444 2
Q ss_pred CCCeeEEEEchhHHHHHHHHHhCcccccceEEecC
Q psy1324 58 RNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINV 92 (115)
Q Consensus 58 ~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~ 92 (115)
.+++.++|+|+||.+++.++.+. ..+++.+..-+
T Consensus 97 ~~kig~vGfc~GG~~a~~~a~~~-~~~~a~v~~yg 130 (218)
T PF01738_consen 97 PGKIGVVGFCWGGKLALLLAARD-PRVDAAVSFYG 130 (218)
T ss_dssp EEEEEEEEETHHHHHHHHHHCCT-TTSSEEEEES-
T ss_pred CCcEEEEEEecchHHhhhhhhhc-cccceEEEEcC
Confidence 25899999999999999999887 56888887766
No 113
>COG2945 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=98.69 E-value=2.1e-07 Score=58.27 Aligned_cols=88 Identities=17% Similarity=0.156 Sum_probs=57.7
Q ss_pred CCCCCHhhHHHHHHhhhC-CceEEEecCCCCCCC--ccch-h---hHHHHHHHHHHHhCC--CCeeEEEEchhHHHHHHH
Q psy1324 6 GFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFRT--IADR-Y---FLVDSLKVFLDHLGR--NRCILIGRDFGGSLVWSF 76 (115)
Q Consensus 6 G~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s--~~~~-~---~~~~~~~~~~~~~~~--~~~~lvg~S~Gg~~a~~~ 76 (115)
|...+...-+.+.+.|.+ ||.++.+|+||.|.| .-+. . +.+....++++.... ....+.|+|+|++++..+
T Consensus 41 gGtm~nkvv~~la~~l~~~G~atlRfNfRgVG~S~G~fD~GiGE~~Da~aaldW~~~~hp~s~~~~l~GfSFGa~Ia~~l 120 (210)
T COG2945 41 GGTMNNKVVQTLARALVKRGFATLRFNFRGVGRSQGEFDNGIGELEDAAAALDWLQARHPDSASCWLAGFSFGAYIAMQL 120 (210)
T ss_pred cCccCCHHHHHHHHHHHhCCceEEeecccccccccCcccCCcchHHHHHHHHHHHHhhCCCchhhhhcccchHHHHHHHH
Confidence 333444555566667765 999999999999999 2221 1 344444444444322 234789999999999999
Q ss_pred HHhCcccccceEEecCCC
Q psy1324 77 LDKYPELVVKSIIINVPH 94 (115)
Q Consensus 77 ~~~~~~~v~~~v~~~~~~ 94 (115)
+.+.|+ ....+.+.++.
T Consensus 121 a~r~~e-~~~~is~~p~~ 137 (210)
T COG2945 121 AMRRPE-ILVFISILPPI 137 (210)
T ss_pred HHhccc-ccceeeccCCC
Confidence 999877 44444444443
No 114
>PF06057 VirJ: Bacterial virulence protein (VirJ); InterPro: IPR010333 This entry contains several bacterial VirJ virulence proteins. VirJ is thought to be involved in the type IV secretion system. It is thought that the substrate proteins localised to the periplasm may associate with the pilus in a manner that is mediated by VirJ, and suggest a two-step process for type IV secretion in Agrobacterium [].
Probab=98.67 E-value=7.5e-08 Score=60.34 Aligned_cols=97 Identities=21% Similarity=0.292 Sum_probs=73.1
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCCCCC-ccchhhHHHHHHHHHH----HhCCCCeeEEEEchhHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFRT-IADRYFLVDSLKVFLD----HLGRNRCILIGRDFGGSLVW 74 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s-~~~~~~~~~~~~~~~~----~~~~~~~~lvg~S~Gg~~a~ 74 (115)
+|++.|=++-...=+.+.+.|++ |+.|+.+|-+-+-++ .... +.++++..+++ +.+.++++|+|.|+|+-+..
T Consensus 5 ~v~~SGDgGw~~~d~~~a~~l~~~G~~VvGvdsl~Yfw~~rtP~-~~a~Dl~~~i~~y~~~w~~~~vvLiGYSFGADvlP 83 (192)
T PF06057_consen 5 AVFFSGDGGWRDLDKQIAEALAKQGVPVVGVDSLRYFWSERTPE-QTAADLARIIRHYRARWGRKRVVLIGYSFGADVLP 83 (192)
T ss_pred EEEEeCCCCchhhhHHHHHHHHHCCCeEEEechHHHHhhhCCHH-HHHHHHHHHHHHHHHHhCCceEEEEeecCCchhHH
Confidence 47888888877666778888865 999999998877666 1111 44555555554 44678999999999999888
Q ss_pred HHHHhCc----ccccceEEecCCCChhH
Q psy1324 75 SFLDKYP----ELVVKSIIINVPHPAVF 98 (115)
Q Consensus 75 ~~~~~~~----~~v~~~v~~~~~~~~~~ 98 (115)
....+.| ++|..++++++.....+
T Consensus 84 ~~~nrLp~~~r~~v~~v~Ll~p~~~~dF 111 (192)
T PF06057_consen 84 FIYNRLPAALRARVAQVVLLSPSTTADF 111 (192)
T ss_pred HHHhhCCHHHHhheeEEEEeccCCcceE
Confidence 8888887 46889999998775544
No 115
>COG0412 Dienelactone hydrolase and related enzymes [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.67 E-value=3.5e-07 Score=59.62 Aligned_cols=93 Identities=16% Similarity=0.128 Sum_probs=67.1
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCC-CCC-ccc--h--h-----------hHHHHHHHHHHHh---C--
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTN-FRT-IAD--R--Y-----------FLVDSLKVFLDHL---G-- 57 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~-g~s-~~~--~--~-----------~~~~~~~~~~~~~---~-- 57 (115)
||++|++.+-....+.+.++++. ||.+++||+.+. +.+ ... . . +...++...++.+ .
T Consensus 30 VIv~hei~Gl~~~i~~~a~rlA~~Gy~v~~Pdl~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~d~~a~~~~L~~~~~~ 109 (236)
T COG0412 30 VIVLHEIFGLNPHIRDVARRLAKAGYVVLAPDLYGRQGDPTDIEDEPAELETGLVERVDPAEVLADIDAALDYLARQPQV 109 (236)
T ss_pred EEEEecccCCchHHHHHHHHHHhCCcEEEechhhccCCCCCcccccHHHHhhhhhccCCHHHHHHHHHHHHHHHHhCCCC
Confidence 68999999999999999999976 999999997753 222 111 0 0 2334444444444 2
Q ss_pred -CCCeeEEEEchhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 58 -RNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 58 -~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
.+++.++|+||||.+++.++.+.| .+++.+..-+..
T Consensus 110 ~~~~ig~~GfC~GG~~a~~~a~~~~-~v~a~v~fyg~~ 146 (236)
T COG0412 110 DPKRIGVVGFCMGGGLALLAATRAP-EVKAAVAFYGGL 146 (236)
T ss_pred CCceEEEEEEcccHHHHHHhhcccC-CccEEEEecCCC
Confidence 457999999999999999999987 566666554443
No 116
>COG4814 Uncharacterized protein with an alpha/beta hydrolase fold [General function prediction only]
Probab=98.57 E-value=8.5e-07 Score=57.80 Aligned_cols=95 Identities=16% Similarity=0.204 Sum_probs=65.9
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCce------EEEecCCCC----C------CCccch--h--------hHHHHHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYW------TVAVDIKTN----F------RTIADR--Y--------FLVDSLKVFLD 54 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~------v~~~d~~g~----g------~s~~~~--~--------~~~~~~~~~~~ 54 (115)
.||+||++++......++.++.+.++ +..+|--|- | ..|.-. | .+...+..++.
T Consensus 48 TIfIhGsgG~asS~~~Mv~ql~~~~~~~~e~Lt~~V~~dgslk~tGk~~Kd~~nP~I~~gfe~n~~s~~~~s~wlk~~ms 127 (288)
T COG4814 48 TIFIHGSGGTASSLNGMVNQLLPDYKAGTESLTMTVDVDGSLKVTGKISKDAKNPIIEFGFEDNTASGLDQSKWLKKAMS 127 (288)
T ss_pred eEEEecCCCChhHHHHHHHHhhhcccccccceEEEEcCCCcEEEeeeecccCCCCeEEEEEecCcCchhhHHHHHHHHHH
Confidence 38999999999999999999866442 444444331 0 001111 1 34444444444
Q ss_pred H----hCCCCeeEEEEchhHHHHHHHHHhCcc-----cccceEEecCCCC
Q psy1324 55 H----LGRNRCILIGRDFGGSLVWSFLDKYPE-----LVVKSIIINVPHP 95 (115)
Q Consensus 55 ~----~~~~~~~lvg~S~Gg~~a~~~~~~~~~-----~v~~~v~~~~~~~ 95 (115)
. .+.+.+..+||||||.-...|+..+.. .+.+++.++++.-
T Consensus 128 yL~~~Y~i~k~n~VGhSmGg~~~~~Y~~~yg~dks~P~lnK~V~l~gpfN 177 (288)
T COG4814 128 YLQKHYNIPKFNAVGHSMGGLGLTYYMIDYGDDKSLPPLNKLVSLAGPFN 177 (288)
T ss_pred HHHHhcCCceeeeeeeccccHHHHHHHHHhcCCCCCcchhheEEeccccc
Confidence 3 467899999999999999999998753 3899999998865
No 117
>KOG2624|consensus
Probab=98.54 E-value=1.6e-07 Score=65.31 Aligned_cols=94 Identities=18% Similarity=0.273 Sum_probs=73.5
Q ss_pred CEeecCCCCCHhhHHHH------HHhhhC-CceEEEecCCCCCCC-------cc-ch-h-----------hHHHHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQ------MSEFSH-EYWTVAVDIKTNFRT-------IA-DR-Y-----------FLVDSLKVFL 53 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~------~~~l~~-~~~v~~~d~~g~g~s-------~~-~~-~-----------~~~~~~~~~~ 53 (115)
|++.||...++..|-.. .-.|++ ||.|+.-+.||...| +. .. | +..+.+.-++
T Consensus 76 Vll~HGLl~sS~~Wv~n~p~~sLaf~LadaGYDVWLgN~RGn~ySr~h~~l~~~~~~~FW~FS~~Em~~yDLPA~IdyIL 155 (403)
T KOG2624|consen 76 VLLQHGLLASSSSWVLNGPEQSLAFLLADAGYDVWLGNNRGNTYSRKHKKLSPSSDKEFWDFSWHEMGTYDLPAMIDYIL 155 (403)
T ss_pred EEEeeccccccccceecCccccHHHHHHHcCCceeeecCcCcccchhhcccCCcCCcceeecchhhhhhcCHHHHHHHHH
Confidence 68999999999999533 334555 999999999997766 32 22 2 5566666777
Q ss_pred HHhCCCCeeEEEEchhHHHHHHHHHhCcc---cccceEEecCCC
Q psy1324 54 DHLGRNRCILIGRDFGGSLVWSFLDKYPE---LVVKSIIINVPH 94 (115)
Q Consensus 54 ~~~~~~~~~lvg~S~Gg~~a~~~~~~~~~---~v~~~v~~~~~~ 94 (115)
+..+.++++.+|||.|+......+...|+ +|+.++.++|..
T Consensus 156 ~~T~~~kl~yvGHSQGtt~~fv~lS~~p~~~~kI~~~~aLAP~~ 199 (403)
T KOG2624|consen 156 EKTGQEKLHYVGHSQGTTTFFVMLSERPEYNKKIKSFIALAPAA 199 (403)
T ss_pred HhccccceEEEEEEccchhheehhcccchhhhhhheeeeecchh
Confidence 77788999999999999999988888865 688888888775
No 118
>PLN02606 palmitoyl-protein thioesterase
Probab=98.54 E-value=1.2e-06 Score=58.69 Aligned_cols=94 Identities=15% Similarity=0.156 Sum_probs=63.6
Q ss_pred CEeecCCC--CCHhhHHHHHHhhh--CCceEEEecCCCCCCCccchh-----hHHHHHHHHHHHhC--CCCeeEEEEchh
Q psy1324 1 MLFLHGFP--ESWYIWKHQMSEFS--HEYWTVAVDIKTNFRTIADRY-----FLVDSLKVFLDHLG--RNRCILIGRDFG 69 (115)
Q Consensus 1 vl~~hG~~--~~~~~~~~~~~~l~--~~~~v~~~d~~g~g~s~~~~~-----~~~~~~~~~~~~~~--~~~~~lvg~S~G 69 (115)
||+.||++ .....+..+.+.+. .+..+.++.. |-+. ...| ++++.+.+.++... .+-+.++|+|.|
T Consensus 29 vViwHGlgD~~~~~~~~~~~~~i~~~~~~pg~~v~i-g~~~--~~s~~~~~~~Qv~~vce~l~~~~~L~~G~naIGfSQG 105 (306)
T PLN02606 29 FVLFHGFGGECSNGKVSNLTQFLINHSGYPGTCVEI-GNGV--QDSLFMPLRQQASIACEKIKQMKELSEGYNIVAESQG 105 (306)
T ss_pred EEEECCCCcccCCchHHHHHHHHHhCCCCCeEEEEE-CCCc--ccccccCHHHHHHHHHHHHhcchhhcCceEEEEEcch
Confidence 68999999 55567888877775 2554444442 2121 1122 44444444444321 146999999999
Q ss_pred HHHHHHHHHhCcc--cccceEEecCCCChh
Q psy1324 70 GSLVWSFLDKYPE--LVVKSIIINVPHPAV 97 (115)
Q Consensus 70 g~~a~~~~~~~~~--~v~~~v~~~~~~~~~ 97 (115)
|.++..++.+.|. .|+.+|.+++++-..
T Consensus 106 glflRa~ierc~~~p~V~nlISlggph~Gv 135 (306)
T PLN02606 106 NLVARGLIEFCDNAPPVINYVSLGGPHAGV 135 (306)
T ss_pred hHHHHHHHHHCCCCCCcceEEEecCCcCCc
Confidence 9999999999987 599999999876443
No 119
>COG4757 Predicted alpha/beta hydrolase [General function prediction only]
Probab=98.51 E-value=4e-07 Score=58.73 Aligned_cols=72 Identities=14% Similarity=0.185 Sum_probs=51.2
Q ss_pred CCCCCHhhHHHHHHhhhC-CceEEEecCCCCCCC-ccch------h------hHHHHHHHHHHHhCCCCeeEEEEchhHH
Q psy1324 6 GFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFRT-IADR------Y------FLVDSLKVFLDHLGRNRCILIGRDFGGS 71 (115)
Q Consensus 6 G~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s-~~~~------~------~~~~~~~~~~~~~~~~~~~lvg~S~Gg~ 71 (115)
+.+.....|+++...+.. +|+|...|+||.|.| |... | +....+...-+.+...+.+++|||+||.
T Consensus 38 a~Gv~~~fYRrfA~~a~~~Gf~Vlt~dyRG~g~S~p~~~~~~~~~~~DwA~~D~~aal~~~~~~~~~~P~y~vgHS~GGq 117 (281)
T COG4757 38 ATGVGQYFYRRFAAAAAKAGFEVLTFDYRGIGQSRPASLSGSQWRYLDWARLDFPAALAALKKALPGHPLYFVGHSFGGQ 117 (281)
T ss_pred cCCcchhHhHHHHHHhhccCceEEEEecccccCCCccccccCccchhhhhhcchHHHHHHHHhhCCCCceEEeeccccce
Confidence 345566778888888765 999999999999999 3221 2 3344444444445557899999999999
Q ss_pred HHHHHH
Q psy1324 72 LVWSFL 77 (115)
Q Consensus 72 ~a~~~~ 77 (115)
+.-.+.
T Consensus 118 a~gL~~ 123 (281)
T COG4757 118 ALGLLG 123 (281)
T ss_pred eecccc
Confidence 765543
No 120
>TIGR01849 PHB_depoly_PhaZ polyhydroxyalkanoate depolymerase, intracellular. This model represents an intracellular depolymerase for polyhydroxyalkanoate (PHA), a carbon and energy storing polyester that accumulates in granules in many bacterial species when carbon sources are abundant but other nutrients are limiting. This family is named for PHAs generally, rather than polyhydroxybutyrate (PHB) specificially as in Ralstonia eutropha H16, to avoid overcalling chemical specificity in other species. Note that this family lacks the classic GXSXG lipase motif and instead shows weak similarity to some
Probab=98.50 E-value=2.1e-06 Score=59.86 Aligned_cols=93 Identities=13% Similarity=0.104 Sum_probs=68.1
Q ss_pred EeecCCCCCHhh-HHHHHHhhhCCceEEEecCCCCCCCc--cchh---hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHH
Q psy1324 2 LFLHGFPESWYI-WKHQMSEFSHEYWTVAVDIKTNFRTI--ADRY---FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWS 75 (115)
Q Consensus 2 l~~hG~~~~~~~-~~~~~~~l~~~~~v~~~d~~g~g~s~--~~~~---~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~ 75 (115)
|++.-+.+.-.. -+.+++.+-+++.|+..|+..-+..| ...| +.++.+.+++++++.+ ++++|.|+||.+++.
T Consensus 106 LiV~Pl~g~~~~L~RS~V~~Ll~g~dVYl~DW~~p~~vp~~~~~f~ldDYi~~l~~~i~~~G~~-v~l~GvCqgG~~~la 184 (406)
T TIGR01849 106 LIVAPMSGHYATLLRSTVEALLPDHDVYITDWVNARMVPLSAGKFDLEDYIDYLIEFIRFLGPD-IHVIAVCQPAVPVLA 184 (406)
T ss_pred EEEcCCchHHHHHHHHHHHHHhCCCcEEEEeCCCCCCCchhcCCCCHHHHHHHHHHHHHHhCCC-CcEEEEchhhHHHHH
Confidence 444444433322 35677777569999999998776553 2223 7778888999999866 999999999999776
Q ss_pred HHHhC-----cccccceEEecCCCC
Q psy1324 76 FLDKY-----PELVVKSIIINVPHP 95 (115)
Q Consensus 76 ~~~~~-----~~~v~~~v~~~~~~~ 95 (115)
+++.+ |++++.++++++|..
T Consensus 185 a~Al~a~~~~p~~~~sltlm~~PID 209 (406)
T TIGR01849 185 AVALMAENEPPAQPRSMTLMGGPID 209 (406)
T ss_pred HHHHHHhcCCCCCcceEEEEecCcc
Confidence 66665 667999999998765
No 121
>KOG4391|consensus
Probab=98.49 E-value=9.2e-08 Score=61.19 Aligned_cols=93 Identities=15% Similarity=0.257 Sum_probs=67.2
Q ss_pred CEeecCCCCCHhhHHHHHHhh-hC-CceEEEecCCCCCCC---ccch-h-hHHHHHHHHH-HH--hCCCCeeEEEEchhH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEF-SH-EYWTVAVDIKTNFRT---IADR-Y-FLVDSLKVFL-DH--LGRNRCILIGRDFGG 70 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l-~~-~~~v~~~d~~g~g~s---~~~~-~-~~~~~~~~~~-~~--~~~~~~~lvg~S~Gg 70 (115)
++.+|+..++--..-.+++-+ .+ +.+|+.+++||+|.| |.+. . -..+.+.+.+ .+ ++..++++.|-|.||
T Consensus 81 lLyfh~NAGNmGhr~~i~~~fy~~l~mnv~ivsYRGYG~S~GspsE~GL~lDs~avldyl~t~~~~dktkivlfGrSlGG 160 (300)
T KOG4391|consen 81 LLYFHANAGNMGHRLPIARVFYVNLKMNVLIVSYRGYGKSEGSPSEEGLKLDSEAVLDYLMTRPDLDKTKIVLFGRSLGG 160 (300)
T ss_pred EEEEccCCCcccchhhHHHHHHHHcCceEEEEEeeccccCCCCccccceeccHHHHHHHHhcCccCCcceEEEEecccCC
Confidence 467898877765554555543 33 899999999999999 4443 2 3333333333 22 234689999999999
Q ss_pred HHHHHHHHhCcccccceEEecCC
Q psy1324 71 SLVWSFLDKYPELVVKSIIINVP 93 (115)
Q Consensus 71 ~~a~~~~~~~~~~v~~~v~~~~~ 93 (115)
.+|..++.+..+++.++++-++.
T Consensus 161 Avai~lask~~~ri~~~ivENTF 183 (300)
T KOG4391|consen 161 AVAIHLASKNSDRISAIIVENTF 183 (300)
T ss_pred eeEEEeeccchhheeeeeeechh
Confidence 99999999999999999887754
No 122
>PF03403 PAF-AH_p_II: Platelet-activating factor acetylhydrolase, isoform II; PDB: 3F98_B 3F97_B 3D59_A 3F96_A 3D5E_B 3F9C_A.
Probab=98.48 E-value=7.1e-07 Score=61.88 Aligned_cols=94 Identities=18% Similarity=0.276 Sum_probs=53.5
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCCCCC---c---------c-------------------ch-h----
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFRT---I---------A-------------------DR-Y---- 43 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s---~---------~-------------------~~-~---- 43 (115)
|||-||++++...|-.++..|+. ||-|+++|.|..... . . .. +
T Consensus 103 vIFSHGlgg~R~~yS~~~~eLAS~GyVV~aieHrDgSa~~t~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~R~ 182 (379)
T PF03403_consen 103 VIFSHGLGGSRTSYSAICGELASHGYVVAAIEHRDGSAPATYFMRDGSGAEVEPYVVEYLEEEWIPLRDFDPEEEFELRN 182 (379)
T ss_dssp EEEE--TT--TTTTHHHHHHHHHTT-EEEEE---SS-SSEEEE-SSHHHHHHT---------EEEE-----GGGHHHHHH
T ss_pred EEEeCCCCcchhhHHHHHHHHHhCCeEEEEeccCCCceeEEEeccCCCccccccccccccccceeccccccchhHHHHHH
Confidence 68999999999999999888865 999999999864211 0 0 00 1
Q ss_pred ----hHHHHHH---HHHHHh-----------------------CCCCeeEEEEchhHHHHHHHHHhCcccccceEEecCC
Q psy1324 44 ----FLVDSLK---VFLDHL-----------------------GRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVP 93 (115)
Q Consensus 44 ----~~~~~~~---~~~~~~-----------------------~~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~ 93 (115)
.-++++. ..++++ +.+++.++|||+||..+...+.+. .+++..|.+++.
T Consensus 183 ~QL~~R~~Ei~~~l~~L~~i~~G~~~~~~l~~~~~l~~~~grlD~~~i~~~GHSFGGATa~~~l~~d-~r~~~~I~LD~W 261 (379)
T PF03403_consen 183 AQLRQRVAEIQFVLDALEEINSGDPVENVLPSSFDLSQFKGRLDLSRIGLAGHSFGGATALQALRQD-TRFKAGILLDPW 261 (379)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHTT-----SS--SS-GGGGTT-EEEEEEEEEEETHHHHHHHHHHHH--TT--EEEEES--
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCCccccccCCccCHHHHhhhcchhheeeeecCchHHHHHHHHhhc-cCcceEEEeCCc
Confidence 0011222 222221 124689999999999999988776 668899999976
Q ss_pred CC
Q psy1324 94 HP 95 (115)
Q Consensus 94 ~~ 95 (115)
..
T Consensus 262 ~~ 263 (379)
T PF03403_consen 262 MF 263 (379)
T ss_dssp -T
T ss_pred cc
Confidence 54
No 123
>PF05448 AXE1: Acetyl xylan esterase (AXE1); InterPro: IPR008391 This family consists of several bacterial acetyl xylan esterase proteins. Acetyl xylan esterases are enzymes that hydrolyse the ester linkages of the acetyl groups in position 2 and/or 3 of the xylose moieties of natural acetylated xylan from hardwood. These enzymes are one of the accessory enzymes which are part of the xylanolytic system, together with xylanases, beta-xylosidases, alpha-arabinofuranosidases and methylglucuronidases; these are all required for the complete hydrolysis of xylan [].; PDB: 1VLQ_H 3M81_E 3M82_D 3M83_C 3FCY_A 1ODS_F 1ODT_C 1L7A_A 3FYT_A 2XLB_F ....
Probab=98.47 E-value=2.3e-06 Score=58.15 Aligned_cols=93 Identities=16% Similarity=0.069 Sum_probs=57.6
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC-----c-----------------cch-h--hHHHHHHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT-----I-----------------ADR-Y--FLVDSLKVFLDH 55 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s-----~-----------------~~~-~--~~~~~~~~~~~~ 55 (115)
||.+||+++....|.........|+.++.+|.+|.|.. . .+. | .+..+....++.
T Consensus 86 vv~~hGyg~~~~~~~~~~~~a~~G~~vl~~d~rGqg~~~~d~~~~~~~~~~g~~~~g~~~~~e~~yyr~~~~D~~ravd~ 165 (320)
T PF05448_consen 86 VVQFHGYGGRSGDPFDLLPWAAAGYAVLAMDVRGQGGRSPDYRGSSGGTLKGHITRGIDDNPEDYYYRRVYLDAVRAVDF 165 (320)
T ss_dssp EEEE--TT--GGGHHHHHHHHHTT-EEEEE--TTTSSSS-B-SSBSSS-SSSSTTTTTTS-TTT-HHHHHHHHHHHHHHH
T ss_pred EEEecCCCCCCCCcccccccccCCeEEEEecCCCCCCCCCCccccCCCCCccHHhcCccCchHHHHHHHHHHHHHHHHHH
Confidence 57889999998888776666667999999999998822 0 011 1 222233322322
Q ss_pred ---h---CCCCeeEEEEchhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 56 ---L---GRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 56 ---~---~~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
+ +.+++.+.|.|.||.+++.++...++ |++++..-|..
T Consensus 166 l~slpevD~~rI~v~G~SqGG~lal~~aaLd~r-v~~~~~~vP~l 209 (320)
T PF05448_consen 166 LRSLPEVDGKRIGVTGGSQGGGLALAAAALDPR-VKAAAADVPFL 209 (320)
T ss_dssp HHTSTTEEEEEEEEEEETHHHHHHHHHHHHSST--SEEEEESESS
T ss_pred HHhCCCcCcceEEEEeecCchHHHHHHHHhCcc-ccEEEecCCCc
Confidence 2 23589999999999999999999865 88777665543
No 124
>PRK04940 hypothetical protein; Provisional
Probab=98.47 E-value=1.9e-06 Score=53.83 Aligned_cols=86 Identities=16% Similarity=0.119 Sum_probs=51.2
Q ss_pred CEeecCCCCCHhh--HHHH-HHhhhCCceEEEecCCCCCCCccchhhHHHHHHHHHHHhC----CCCeeEEEEchhHHHH
Q psy1324 1 MLFLHGFPESWYI--WKHQ-MSEFSHEYWTVAVDIKTNFRTIADRYFLVDSLKVFLDHLG----RNRCILIGRDFGGSLV 73 (115)
Q Consensus 1 vl~~hG~~~~~~~--~~~~-~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~----~~~~~lvg~S~Gg~~a 73 (115)
||++||+.++... .+.. .+.+..+.+++ +++. .+|. ...+.+.+.++++. .+++.++|+|+||+.|
T Consensus 2 IlYlHGF~SS~~S~~~Ka~~l~~~~p~~~~~--~l~~--~~P~---~a~~~l~~~i~~~~~~~~~~~~~liGSSLGGyyA 74 (180)
T PRK04940 2 IIYLHGFDSTSPGNHEKVLQLQFIDPDVRLI--SYST--LHPK---HDMQHLLKEVDKMLQLSDDERPLICGVGLGGYWA 74 (180)
T ss_pred EEEeCCCCCCCCccHHHHHhheeeCCCCeEE--ECCC--CCHH---HHHHHHHHHHHHhhhccCCCCcEEEEeChHHHHH
Confidence 5789999887766 4221 11222244443 3331 1132 33444555554321 2579999999999999
Q ss_pred HHHHHhCcccccceEEecCCCCh
Q psy1324 74 WSFLDKYPELVVKSIIINVPHPA 96 (115)
Q Consensus 74 ~~~~~~~~~~v~~~v~~~~~~~~ 96 (115)
..++.++. ++ .|+++|...+
T Consensus 75 ~~La~~~g--~~-aVLiNPAv~P 94 (180)
T PRK04940 75 ERIGFLCG--IR-QVIFNPNLFP 94 (180)
T ss_pred HHHHHHHC--CC-EEEECCCCCh
Confidence 99999973 44 4567766433
No 125
>COG3571 Predicted hydrolase of the alpha/beta-hydrolase fold [General function prediction only]
Probab=98.46 E-value=2e-06 Score=52.70 Aligned_cols=94 Identities=11% Similarity=0.145 Sum_probs=73.9
Q ss_pred CEeecCCCC--CHhhHHHHHHhhhC-CceEEEecCCCCCCC------c-cch--h--hHHHHHHHHHHHhCCCCeeEEEE
Q psy1324 1 MLFLHGFPE--SWYIWKHQMSEFSH-EYWTVAVDIKTNFRT------I-ADR--Y--FLVDSLKVFLDHLGRNRCILIGR 66 (115)
Q Consensus 1 vl~~hG~~~--~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s------~-~~~--~--~~~~~~~~~~~~~~~~~~~lvg~ 66 (115)
||+-||.+. ++..+..+...++. ++.+..+++|.+... | ... . ++...+.++.+.+...+.++=|+
T Consensus 17 ilLaHGAGasmdSt~m~~~a~~la~~G~~vaRfefpYma~Rrtg~rkPp~~~~t~~~~~~~~~aql~~~l~~gpLi~GGk 96 (213)
T COG3571 17 ILLAHGAGASMDSTSMTAVAAALARRGWLVARFEFPYMAARRTGRRKPPPGSGTLNPEYIVAIAQLRAGLAEGPLIIGGK 96 (213)
T ss_pred EEEecCCCCCCCCHHHHHHHHHHHhCceeEEEeecchhhhccccCCCCcCccccCCHHHHHHHHHHHhcccCCceeeccc
Confidence 578898865 55668888888865 999999988765333 1 111 1 77778888888877779999999
Q ss_pred chhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 67 DFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 67 S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
||||-++...+......|++++.++-|.
T Consensus 97 SmGGR~aSmvade~~A~i~~L~clgYPf 124 (213)
T COG3571 97 SMGGRVASMVADELQAPIDGLVCLGYPF 124 (213)
T ss_pred cccchHHHHHHHhhcCCcceEEEecCcc
Confidence 9999999999999877799999999664
No 126
>PLN02633 palmitoyl protein thioesterase family protein
Probab=98.43 E-value=3.3e-06 Score=56.69 Aligned_cols=93 Identities=13% Similarity=0.173 Sum_probs=62.1
Q ss_pred CEeecCCCCCHh--hHHHHHHhhhC--CceEEEecCCCCCCCccchh-----hHHHHHHHHHHHhC--CCCeeEEEEchh
Q psy1324 1 MLFLHGFPESWY--IWKHQMSEFSH--EYWTVAVDIKTNFRTIADRY-----FLVDSLKVFLDHLG--RNRCILIGRDFG 69 (115)
Q Consensus 1 vl~~hG~~~~~~--~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~-----~~~~~~~~~~~~~~--~~~~~lvg~S~G 69 (115)
+|+.||++.+.. ....+.+.+.+ |..+.++.. |.+....| ++++.+.+.+.... .+-+.++|+|.|
T Consensus 28 ~ViwHG~GD~c~~~g~~~~~~l~~~~~g~~~~~i~i---g~~~~~s~~~~~~~Qve~vce~l~~~~~l~~G~naIGfSQG 104 (314)
T PLN02633 28 FIMLHGIGTQCSDATNANFTQLLTNLSGSPGFCLEI---GNGVGDSWLMPLTQQAEIACEKVKQMKELSQGYNIVGRSQG 104 (314)
T ss_pred eEEecCCCcccCCchHHHHHHHHHhCCCCceEEEEE---CCCccccceeCHHHHHHHHHHHHhhchhhhCcEEEEEEccc
Confidence 589999987544 45555555533 555556544 22222222 44555444444321 146999999999
Q ss_pred HHHHHHHHHhCcc--cccceEEecCCCCh
Q psy1324 70 GSLVWSFLDKYPE--LVVKSIIINVPHPA 96 (115)
Q Consensus 70 g~~a~~~~~~~~~--~v~~~v~~~~~~~~ 96 (115)
|.++..++.+.|+ .|+.+|.+++++-.
T Consensus 105 GlflRa~ierc~~~p~V~nlISlggph~G 133 (314)
T PLN02633 105 NLVARGLIEFCDGGPPVYNYISLAGPHAG 133 (314)
T ss_pred hHHHHHHHHHCCCCCCcceEEEecCCCCC
Confidence 9999999999987 59999999987643
No 127
>KOG2541|consensus
Probab=98.37 E-value=4.2e-06 Score=55.00 Aligned_cols=95 Identities=14% Similarity=0.123 Sum_probs=67.1
Q ss_pred CEeecCCCCCHhh--HHHHHHhhhC--CceEEEecCCCCC--CCccchh-hHHHHHHHHHHHhC--CCCeeEEEEchhHH
Q psy1324 1 MLFLHGFPESWYI--WKHQMSEFSH--EYWTVAVDIKTNF--RTIADRY-FLVDSLKVFLDHLG--RNRCILIGRDFGGS 71 (115)
Q Consensus 1 vl~~hG~~~~~~~--~~~~~~~l~~--~~~v~~~d~~g~g--~s~~~~~-~~~~~~~~~~~~~~--~~~~~lvg~S~Gg~ 71 (115)
+|++||++..... +.++.+.+.+ +..+++.|.- .| ++-.... ++++...+.+.... .+-+.++|.|.||.
T Consensus 26 ~ii~HGigd~c~~~~~~~~~q~l~~~~g~~v~~leig-~g~~~s~l~pl~~Qv~~~ce~v~~m~~lsqGynivg~SQGgl 104 (296)
T KOG2541|consen 26 VIVWHGIGDSCSSLSMANLTQLLEELPGSPVYCLEIG-DGIKDSSLMPLWEQVDVACEKVKQMPELSQGYNIVGYSQGGL 104 (296)
T ss_pred EEEEeccCcccccchHHHHHHHHHhCCCCeeEEEEec-CCcchhhhccHHHHHHHHHHHHhcchhccCceEEEEEccccH
Confidence 5899999987776 7788877765 8888888763 22 2200001 45555555444322 25799999999999
Q ss_pred HHHHHHHhCcc-cccceEEecCCCCh
Q psy1324 72 LVWSFLDKYPE-LVVKSIIINVPHPA 96 (115)
Q Consensus 72 ~a~~~~~~~~~-~v~~~v~~~~~~~~ 96 (115)
++..++...++ .++.+|.+++|+..
T Consensus 105 v~Raliq~cd~ppV~n~ISL~gPhaG 130 (296)
T KOG2541|consen 105 VARALIQFCDNPPVKNFISLGGPHAG 130 (296)
T ss_pred HHHHHHHhCCCCCcceeEeccCCcCC
Confidence 99999999764 59999999988743
No 128
>PF02129 Peptidase_S15: X-Pro dipeptidyl-peptidase (S15 family); InterPro: IPR000383 This entry represents a domain found peptidases Xaa-Pro dipeptidyl-peptidase and glutaryl-7-aminocephalosporanic-acid acylase, which belong to MEROPS peptidase families S15 and S45 respectively []. It is also found in hydrolases from the CocE/NonD family. Cocaine esterase (CocE) hydrolyzes cocaine endowing the bacteria with the ability to utilise cocaine as a sole source of carbon and energy []. ; GO: 0004177 aminopeptidase activity, 0006508 proteolysis; PDB: 1LNS_A 3PUI_A 3PUH_B 1JU3_A 3I2I_A 3I2G_A 1JU4_A 3I2K_A 3IDA_A 3I2H_A ....
Probab=98.36 E-value=3.8e-06 Score=55.69 Aligned_cols=72 Identities=13% Similarity=0.110 Sum_probs=50.5
Q ss_pred hCCceEEEecCCCCCCC--ccch-h-hHHHHHHHHHHHh---C--CCCeeEEEEchhHHHHHHHHHhCcccccceEEecC
Q psy1324 22 SHEYWTVAVDIKTNFRT--IADR-Y-FLVDSLKVFLDHL---G--RNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINV 92 (115)
Q Consensus 22 ~~~~~v~~~d~~g~g~s--~~~~-~-~~~~~~~~~~~~~---~--~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~ 92 (115)
..||.++..|.||.|.| .... . ...++..++++.+ . ..+|-++|.|++|..++..+...|..+++++...+
T Consensus 55 ~~GY~vV~~D~RG~g~S~G~~~~~~~~e~~D~~d~I~W~~~Qpws~G~VGm~G~SY~G~~q~~~A~~~~p~LkAi~p~~~ 134 (272)
T PF02129_consen 55 ERGYAVVVQDVRGTGGSEGEFDPMSPNEAQDGYDTIEWIAAQPWSNGKVGMYGISYGGFTQWAAAARRPPHLKAIVPQSG 134 (272)
T ss_dssp HTT-EEEEEE-TTSTTS-S-B-TTSHHHHHHHHHHHHHHHHCTTEEEEEEEEEETHHHHHHHHHHTTT-TTEEEEEEESE
T ss_pred hCCCEEEEECCcccccCCCccccCChhHHHHHHHHHHHHHhCCCCCCeEEeeccCHHHHHHHHHHhcCCCCceEEEeccc
Confidence 45999999999999999 1111 2 3444444444443 2 25899999999999999999988888999887765
Q ss_pred C
Q psy1324 93 P 93 (115)
Q Consensus 93 ~ 93 (115)
.
T Consensus 135 ~ 135 (272)
T PF02129_consen 135 W 135 (272)
T ss_dssp -
T ss_pred C
Confidence 4
No 129
>COG4782 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=98.36 E-value=6.6e-06 Score=56.17 Aligned_cols=96 Identities=16% Similarity=0.190 Sum_probs=58.0
Q ss_pred CEeecCCCCCHhh-HHHHHHhh---hCCceEEEecCCCCCCC-----ccch--h---hHHHHHHHHHHHhCCCCeeEEEE
Q psy1324 1 MLFLHGFPESWYI-WKHQMSEF---SHEYWTVAVDIKTNFRT-----IADR--Y---FLVDSLKVFLDHLGRNRCILIGR 66 (115)
Q Consensus 1 vl~~hG~~~~~~~-~~~~~~~l---~~~~~v~~~d~~g~g~s-----~~~~--~---~~~~~~~~~~~~~~~~~~~lvg~ 66 (115)
++|+||+..+=+. -....+.. ......+.+.||..|.- ..+. | .+.+.+..+.+....+++++++|
T Consensus 119 lvFvHGfNntf~dav~R~aqI~~d~g~~~~pVvFSWPS~g~l~~Yn~DreS~~~Sr~aLe~~lr~La~~~~~~~I~ilAH 198 (377)
T COG4782 119 LVFVHGFNNTFEDAVYRTAQIVHDSGNDGVPVVFSWPSRGSLLGYNYDRESTNYSRPALERLLRYLATDKPVKRIYLLAH 198 (377)
T ss_pred EEEEcccCCchhHHHHHHHHHHhhcCCCcceEEEEcCCCCeeeecccchhhhhhhHHHHHHHHHHHHhCCCCceEEEEEe
Confidence 5899999765333 22222222 22566777888866543 1111 3 22222223333334689999999
Q ss_pred chhHHHHHHHHHhC--------cccccceEEecCCCCh
Q psy1324 67 DFGGSLVWSFLDKY--------PELVVKSIIINVPHPA 96 (115)
Q Consensus 67 S~Gg~~a~~~~~~~--------~~~v~~~v~~~~~~~~ 96 (115)
|||.+++++.+.+. +.+++-+|+-.+....
T Consensus 199 SMGtwl~~e~LrQLai~~~~~l~~ki~nViLAaPDiD~ 236 (377)
T COG4782 199 SMGTWLLMEALRQLAIRADRPLPAKIKNVILAAPDIDV 236 (377)
T ss_pred cchHHHHHHHHHHHhccCCcchhhhhhheEeeCCCCCh
Confidence 99999999888774 2347778777766543
No 130
>COG0657 Aes Esterase/lipase [Lipid metabolism]
Probab=98.35 E-value=2.7e-06 Score=57.33 Aligned_cols=94 Identities=18% Similarity=0.188 Sum_probs=59.3
Q ss_pred CEeecCCC---CCHhhHHHHHHhh-h-CCceEEEecCCCCCCCccchh----hHHHHHH-HHHHH---hC--CCCeeEEE
Q psy1324 1 MLFLHGFP---ESWYIWKHQMSEF-S-HEYWTVAVDIKTNFRTIADRY----FLVDSLK-VFLDH---LG--RNRCILIG 65 (115)
Q Consensus 1 vl~~hG~~---~~~~~~~~~~~~l-~-~~~~v~~~d~~g~g~s~~~~~----~~~~~~~-~~~~~---~~--~~~~~lvg 65 (115)
||++||.+ ++.+..+..+..+ . .++.|+.+|+|--- +..| +.+.... .+.+. ++ .+++.++|
T Consensus 82 vly~HGGg~~~g~~~~~~~~~~~~~~~~g~~vv~vdYrlaP---e~~~p~~~~d~~~a~~~l~~~~~~~g~dp~~i~v~G 158 (312)
T COG0657 82 VLYLHGGGWVLGSLRTHDALVARLAAAAGAVVVSVDYRLAP---EHPFPAALEDAYAAYRWLRANAAELGIDPSRIAVAG 158 (312)
T ss_pred EEEEeCCeeeecChhhhHHHHHHHHHHcCCEEEecCCCCCC---CCCCCchHHHHHHHHHHHHhhhHhhCCCccceEEEe
Confidence 58999885 4455554555544 3 39999999988542 2222 1222222 22222 33 46899999
Q ss_pred EchhHHHHHHHHHhCcc----cccceEEecCCCChh
Q psy1324 66 RDFGGSLVWSFLDKYPE----LVVKSIIINVPHPAV 97 (115)
Q Consensus 66 ~S~Gg~~a~~~~~~~~~----~v~~~v~~~~~~~~~ 97 (115)
+|.||.++..++....+ ...+.+++.+.....
T Consensus 159 dSAGG~La~~~a~~~~~~~~~~p~~~~li~P~~d~~ 194 (312)
T COG0657 159 DSAGGHLALALALAARDRGLPLPAAQVLISPLLDLT 194 (312)
T ss_pred cCcccHHHHHHHHHHHhcCCCCceEEEEEecccCCc
Confidence 99999999999888653 356677777664333
No 131
>COG4099 Predicted peptidase [General function prediction only]
Probab=98.34 E-value=4e-06 Score=56.06 Aligned_cols=95 Identities=21% Similarity=0.284 Sum_probs=59.4
Q ss_pred CEeecCCCCCHhhHHHH-HHhh------hC--CceEEEecCCC-CCCC--ccchh--hHHHHHHHHH-HHh--CCCCeeE
Q psy1324 1 MLFLHGFPESWYIWKHQ-MSEF------SH--EYWTVAVDIKT-NFRT--IADRY--FLVDSLKVFL-DHL--GRNRCIL 63 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~-~~~l------~~--~~~v~~~d~~g-~g~s--~~~~~--~~~~~~~~~~-~~~--~~~~~~l 63 (115)
|||+||.++..++-... ...+ .. .+-|++|.+-. +..+ ....+ ...+.+.+.+ ++. +..++++
T Consensus 194 vlfLHgagq~g~dn~~~l~sg~gaiawa~pedqcfVlAPQy~~if~d~e~~t~~~l~~~idli~~vlas~ynID~sRIYv 273 (387)
T COG4099 194 VLFLHGAGQGGSDNDKVLSSGIGAIAWAGPEDQCFVLAPQYNPIFADSEEKTLLYLIEKIDLILEVLASTYNIDRSRIYV 273 (387)
T ss_pred EEEEecCCCCCchhhhhhhcCccceeeecccCceEEEcccccccccccccccchhHHHHHHHHHHHHhhccCcccceEEE
Confidence 68999999877654333 2211 11 22344444222 1112 11111 3444444233 222 3469999
Q ss_pred EEEchhHHHHHHHHHhCcccccceEEecCCCC
Q psy1324 64 IGRDFGGSLVWSFLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 64 vg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~ 95 (115)
+|.|+||+-++.++.++|+.+++.+.+++.-.
T Consensus 274 iGlSrG~~gt~al~~kfPdfFAaa~~iaG~~d 305 (387)
T COG4099 274 IGLSRGGFGTWALAEKFPDFFAAAVPIAGGGD 305 (387)
T ss_pred EeecCcchhhHHHHHhCchhhheeeeecCCCc
Confidence 99999999999999999999999999998765
No 132
>PF12715 Abhydrolase_7: Abhydrolase family; PDB: 3NUZ_C 3G8Y_A.
Probab=98.34 E-value=4.5e-06 Score=57.53 Aligned_cols=96 Identities=16% Similarity=0.119 Sum_probs=52.9
Q ss_pred CEeecCCCCCHhhH------------------HHHHHhhhC-CceEEEecCCCCCCC-ccc------h--h---------
Q psy1324 1 MLFLHGFPESWYIW------------------KHQMSEFSH-EYWTVAVDIKTNFRT-IAD------R--Y--------- 43 (115)
Q Consensus 1 vl~~hG~~~~~~~~------------------~~~~~~l~~-~~~v~~~d~~g~g~s-~~~------~--~--------- 43 (115)
||++||-+.+.+.. ..+..+|++ ||.|+++|.+++|.. +.. . +
T Consensus 118 VL~lHgHg~~Ke~~~g~~gv~~~~~~~~~~~~~~~g~~LAk~GYVvla~D~~g~GER~~~e~~~~~~~~~~~~la~~~l~ 197 (390)
T PF12715_consen 118 VLCLHGHGGGKEKMAGEDGVSPDLKDDYDDPKQDYGDQLAKRGYVVLAPDALGFGERGDMEGAAQGSNYDCQALARNLLM 197 (390)
T ss_dssp EEEE--TT--HHHHCT---SSGCG--STTSTTT-HHHHHHTTTSEEEEE--TTSGGG-SSCCCTTTTS--HHHHHHHHHH
T ss_pred EEEeCCCCCCcccccCCcccccccchhhccccccHHHHHHhCCCEEEEEccccccccccccccccccchhHHHHHHHHHH
Confidence 57888887654331 123445655 999999999999876 111 0 0
Q ss_pred -------hHHHHHHHHHHHhC------CCCeeEEEEchhHHHHHHHHHhCcccccceEEecCCCChh
Q psy1324 44 -------FLVDSLKVFLDHLG------RNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHPAV 97 (115)
Q Consensus 44 -------~~~~~~~~~~~~~~------~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~~~ 97 (115)
..+-+....++.+. .++|.++|+||||..++.+++.. ++|++.+..+......
T Consensus 198 lG~S~~G~~~~ddmr~lDfL~slpeVD~~RIG~~GfSmGg~~a~~LaALD-dRIka~v~~~~l~~~~ 263 (390)
T PF12715_consen 198 LGRSLAGLMAWDDMRALDFLASLPEVDPDRIGCMGFSMGGYRAWWLAALD-DRIKATVANGYLCTTQ 263 (390)
T ss_dssp TT--HHHHHHHHHHHHHHHHCT-TTEEEEEEEEEEEGGGHHHHHHHHHH--TT--EEEEES-B--HH
T ss_pred cCcCHHHHHHHHHHHHHHHHhcCcccCccceEEEeecccHHHHHHHHHcc-hhhHhHhhhhhhhccc
Confidence 11112222333332 36899999999999999999886 5588877766655433
No 133
>PF08538 DUF1749: Protein of unknown function (DUF1749); InterPro: IPR013744 This is a plant and fungal family of unknown function. This family contains many hypothetical proteins. ; PDB: 2Q0X_B.
Probab=98.32 E-value=5.5e-06 Score=55.57 Aligned_cols=95 Identities=18% Similarity=0.219 Sum_probs=55.9
Q ss_pred CEeecCCCC---CHhhHHHHHHhhhC-CceEEEecCC----CCCCCccch-hhHHHHHHHHHHHh-----CCCCeeEEEE
Q psy1324 1 MLFLHGFPE---SWYIWKHQMSEFSH-EYWTVAVDIK----TNFRTIADR-YFLVDSLKVFLDHL-----GRNRCILIGR 66 (115)
Q Consensus 1 vl~~hG~~~---~~~~~~~~~~~l~~-~~~v~~~d~~----g~g~s~~~~-~~~~~~~~~~~~~~-----~~~~~~lvg~ 66 (115)
||||-|.+. +..+...+.+.|.+ ++.++-+.++ |+|.+..+. -+.++++.+.++.. +.++|+|+||
T Consensus 36 llfIGGLtDGl~tvpY~~~La~aL~~~~wsl~q~~LsSSy~G~G~~SL~~D~~eI~~~v~ylr~~~~g~~~~~kIVLmGH 115 (303)
T PF08538_consen 36 LLFIGGLTDGLLTVPYLPDLAEALEETGWSLFQVQLSSSYSGWGTSSLDRDVEEIAQLVEYLRSEKGGHFGREKIVLMGH 115 (303)
T ss_dssp EEEE--TT--TT-STCHHHHHHHHT-TT-EEEEE--GGGBTTS-S--HHHHHHHHHHHHHHHHHHS------S-EEEEEE
T ss_pred EEEECCCCCCCCCCchHHHHHHHhccCCeEEEEEEecCccCCcCcchhhhHHHHHHHHHHHHHHhhccccCCccEEEEec
Confidence 578888865 34557778888865 9999998654 566552221 13333334444444 3579999999
Q ss_pred chhHHHHHHHHHhCc-----ccccceEEecCCCC
Q psy1324 67 DFGGSLVWSFLDKYP-----ELVVKSIIINVPHP 95 (115)
Q Consensus 67 S~Gg~~a~~~~~~~~-----~~v~~~v~~~~~~~ 95 (115)
|-|++-+++|+.... ..|+++|+-+|-..
T Consensus 116 STGcQdvl~Yl~~~~~~~~~~~VdG~ILQApVSD 149 (303)
T PF08538_consen 116 STGCQDVLHYLSSPNPSPSRPPVDGAILQAPVSD 149 (303)
T ss_dssp CCHHHHHHHHHHH-TT---CCCEEEEEEEEE---
T ss_pred CCCcHHHHHHHhccCccccccceEEEEEeCCCCC
Confidence 999999999999863 56999999887653
No 134
>PF02089 Palm_thioest: Palmitoyl protein thioesterase; InterPro: IPR002472 Neuronal ceroid lipofuscinoses (NCL) represent a group of encephalopathies that occur in 1 in 12,500 children. Mutations in the palmitoyl protein thioesterase gene causing infantile neuronal ceroid lipofuscinosis []. The most common mutation results in intracellular accumulation of the polypeptide and undetectable enzyme activity in the brain. Direct sequencing of cDNAs derived from brain RNA of INCL patients has shown a mis-sense transversion of A to T at nucleotide position 364, which results in substitution of Trp for Arg at position 122 in the protein - Arg 122 is immediately adjacent to a lipase consensus sequence that contains the putative active site Ser of PPT. The occurrence of this and two other independent mutations in the PPT gene strongly suggests that defects in this gene cause INCL.; GO: 0008474 palmitoyl-(protein) hydrolase activity, 0006464 protein modification process; PDB: 3GRO_B 1PJA_A 1EXW_A 1EH5_A 1EI9_A.
Probab=98.31 E-value=5.1e-06 Score=55.16 Aligned_cols=94 Identities=17% Similarity=0.219 Sum_probs=53.7
Q ss_pred CEeecCCCCCH---hhHHHHHHhh---hCCceEEEecCCCCCCC--ccchh-----hHHHHHHHHHHHhC--CCCeeEEE
Q psy1324 1 MLFLHGFPESW---YIWKHQMSEF---SHEYWTVAVDIKTNFRT--IADRY-----FLVDSLKVFLDHLG--RNRCILIG 65 (115)
Q Consensus 1 vl~~hG~~~~~---~~~~~~~~~l---~~~~~v~~~d~~g~g~s--~~~~~-----~~~~~~~~~~~~~~--~~~~~lvg 65 (115)
||+.||++.+. ..+..+.+.+ ..|--|.+++.- -+.+ ....| ++++.+.+.++... .+-+.++|
T Consensus 8 vViwHGmGD~~~~~~~m~~i~~~i~~~~PG~yV~si~ig-~~~~~D~~~s~f~~v~~Qv~~vc~~l~~~p~L~~G~~~IG 86 (279)
T PF02089_consen 8 VVIWHGMGDSCCNPSSMGSIKELIEEQHPGTYVHSIEIG-NDPSEDVENSFFGNVNDQVEQVCEQLANDPELANGFNAIG 86 (279)
T ss_dssp EEEE--TT--S--TTTHHHHHHHHHHHSTT--EEE--SS-SSHHHHHHHHHHSHHHHHHHHHHHHHHH-GGGTT-EEEEE
T ss_pred EEEEEcCccccCChhHHHHHHHHHHHhCCCceEEEEEEC-CCcchhhhhhHHHHHHHHHHHHHHHHhhChhhhcceeeee
Confidence 68999998643 3455554444 347777777662 2211 11222 55555666555432 15799999
Q ss_pred EchhHHHHHHHHHhCcc-cccceEEecCCCC
Q psy1324 66 RDFGGSLVWSFLDKYPE-LVVKSIIINVPHP 95 (115)
Q Consensus 66 ~S~Gg~~a~~~~~~~~~-~v~~~v~~~~~~~ 95 (115)
+|.||.++..++.+++. .|+.+|.+++++-
T Consensus 87 fSQGgl~lRa~vq~c~~~~V~nlISlggph~ 117 (279)
T PF02089_consen 87 FSQGGLFLRAYVQRCNDPPVHNLISLGGPHM 117 (279)
T ss_dssp ETCHHHHHHHHHHH-TSS-EEEEEEES--TT
T ss_pred eccccHHHHHHHHHCCCCCceeEEEecCccc
Confidence 99999999999999874 5999999998764
No 135
>PF02450 LCAT: Lecithin:cholesterol acyltransferase; InterPro: IPR003386 Lecithin:cholesterol acyltransferase (LACT), also known as phosphatidylcholine-sterol acyltransferase (2.3.1.43 from EC), is involved in extracellular metabolism of plasma lipoproteins, including cholesterol. It esterifies the free cholesterol transported in plasma lipoproteins, and is activated by apolipoprotein A-I. Defects in LACT cause Norum and Fish eye diseases. This family also includes phospholipid:diacylglycerol acyltransferase (PDAT)(2.3.1.158 from EC), which is involved in triacylglycerol formation by an acyl-CoA independent pathway. The enzyme specifically transfers acyl groups from the sn-2 position of a phospholipid to diacylglycerol, thus forming an sn-1-lysophospholipid [].; GO: 0008374 O-acyltransferase activity, 0006629 lipid metabolic process
Probab=98.28 E-value=6.2e-06 Score=57.45 Aligned_cols=85 Identities=20% Similarity=0.309 Sum_probs=55.2
Q ss_pred hHHHHHHhhhC-Cce----EEE--ecCCCCCCCccchh--hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhCcc-
Q psy1324 13 IWKHQMSEFSH-EYW----TVA--VDIKTNFRTIADRY--FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPE- 82 (115)
Q Consensus 13 ~~~~~~~~l~~-~~~----v~~--~d~~g~g~s~~~~~--~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~~- 82 (115)
.|..+++.|.+ ||. +++ .|+|---.. .+.+ .+.+.+.+..+. ..++++++||||||.++..++...+.
T Consensus 66 ~~~~li~~L~~~GY~~~~~l~~~pYDWR~~~~~-~~~~~~~lk~~ie~~~~~-~~~kv~li~HSmGgl~~~~fl~~~~~~ 143 (389)
T PF02450_consen 66 YFAKLIENLEKLGYDRGKDLFAAPYDWRLSPAE-RDEYFTKLKQLIEEAYKK-NGKKVVLIAHSMGGLVARYFLQWMPQE 143 (389)
T ss_pred hHHHHHHHHHhcCcccCCEEEEEeechhhchhh-HHHHHHHHHHHHHHHHHh-cCCcEEEEEeCCCchHHHHHHHhccch
Confidence 68888888865 544 232 455532110 1112 333333333333 36899999999999999999999743
Q ss_pred -----cccceEEecCCCChhHH
Q psy1324 83 -----LVVKSIIINVPHPAVFK 99 (115)
Q Consensus 83 -----~v~~~v~~~~~~~~~~~ 99 (115)
.|+++|.+++|......
T Consensus 144 ~W~~~~i~~~i~i~~p~~Gs~~ 165 (389)
T PF02450_consen 144 EWKDKYIKRFISIGTPFGGSPK 165 (389)
T ss_pred hhHHhhhhEEEEeCCCCCCChH
Confidence 49999999988765443
No 136
>PF00756 Esterase: Putative esterase; InterPro: IPR000801 This family contains several seemingly unrelated proteins, including human esterase D; mycobacterial antigen 85, which is responsible for the high affinity of mycobacteria to fibronectin; Corynebacterium glutamicum major secreted protein PS1; and hypothetical proteins from Escherichia coli, yeast, mycobacteria and Haemophilus influenzae.; PDB: 3LS2_A 1VA5_B 1DQZ_B 3HRH_A 1DQY_A 2GZR_A 2GZS_A 3GFF_A 1R88_A 3E4D_D ....
Probab=98.24 E-value=3e-06 Score=55.21 Aligned_cols=50 Identities=20% Similarity=0.323 Sum_probs=39.4
Q ss_pred hHHHHHHHHHHHh-CC--CCeeEEEEchhHHHHHHHHHhCcccccceEEecCC
Q psy1324 44 FLVDSLKVFLDHL-GR--NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVP 93 (115)
Q Consensus 44 ~~~~~~~~~~~~~-~~--~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~ 93 (115)
...+++...+++. .. ++..+.|+||||..|+.++.++|+.+.+++.+++.
T Consensus 97 ~l~~el~p~i~~~~~~~~~~~~i~G~S~GG~~Al~~~l~~Pd~F~~~~~~S~~ 149 (251)
T PF00756_consen 97 FLTEELIPYIEANYRTDPDRRAIAGHSMGGYGALYLALRHPDLFGAVIAFSGA 149 (251)
T ss_dssp HHHTHHHHHHHHHSSEEECCEEEEEETHHHHHHHHHHHHSTTTESEEEEESEE
T ss_pred ehhccchhHHHHhcccccceeEEeccCCCcHHHHHHHHhCccccccccccCcc
Confidence 4455666555543 22 23799999999999999999999999999999964
No 137
>PF09752 DUF2048: Uncharacterized conserved protein (DUF2048); InterPro: IPR019149 This family of proteins has no known function.
Probab=98.18 E-value=2.5e-05 Score=53.36 Aligned_cols=93 Identities=14% Similarity=0.175 Sum_probs=64.5
Q ss_pred EeecCCCCCHhhHHH--H-HHhh-hCCceEEEecCCCCCCC-ccchh------------------hHHHHHHHHHHHhCC
Q psy1324 2 LFLHGFPESWYIWKH--Q-MSEF-SHEYWTVAVDIKTNFRT-IADRY------------------FLVDSLKVFLDHLGR 58 (115)
Q Consensus 2 l~~hG~~~~~~~~~~--~-~~~l-~~~~~v~~~d~~g~g~s-~~~~~------------------~~~~~~~~~~~~~~~ 58 (115)
|.++|.+. ..+|+. + ...| ++|+..+.+..|-||.. |.+.. .....+..++++-+.
T Consensus 96 IhLagTGD-h~f~rR~~l~a~pLl~~gi~s~~le~Pyyg~RkP~~Q~~s~l~~VsDl~~~g~~~i~E~~~Ll~Wl~~~G~ 174 (348)
T PF09752_consen 96 IHLAGTGD-HGFWRRRRLMARPLLKEGIASLILENPYYGQRKPKDQRRSSLRNVSDLFVMGRATILESRALLHWLEREGY 174 (348)
T ss_pred EEecCCCc-cchhhhhhhhhhHHHHcCcceEEEecccccccChhHhhcccccchhHHHHHHhHHHHHHHHHHHHHHhcCC
Confidence 34445554 444432 2 3334 55999999999999887 44431 223334444555578
Q ss_pred CCeeEEEEchhHHHHHHHHHhCcccccceEEecCCCC
Q psy1324 59 NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 59 ~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~ 95 (115)
.++.+.|.||||.+|...+...|+.+..+-.+++...
T Consensus 175 ~~~g~~G~SmGG~~A~laa~~~p~pv~~vp~ls~~sA 211 (348)
T PF09752_consen 175 GPLGLTGISMGGHMAALAASNWPRPVALVPCLSWSSA 211 (348)
T ss_pred CceEEEEechhHhhHHhhhhcCCCceeEEEeecccCC
Confidence 8999999999999999999999998887777776654
No 138
>PRK10115 protease 2; Provisional
Probab=98.15 E-value=1.1e-05 Score=59.95 Aligned_cols=94 Identities=15% Similarity=0.139 Sum_probs=63.2
Q ss_pred CEeecCCCCCHh--hHHHHHHhh-hCCceEEEecCCCCCCC-----ccchh----hHHHHHHHHHHHh---C---CCCee
Q psy1324 1 MLFLHGFPESWY--IWKHQMSEF-SHEYWTVAVDIKTNFRT-----IADRY----FLVDSLKVFLDHL---G---RNRCI 62 (115)
Q Consensus 1 vl~~hG~~~~~~--~~~~~~~~l-~~~~~v~~~d~~g~g~s-----~~~~~----~~~~~~~~~~~~~---~---~~~~~ 62 (115)
||++||..+... .|......+ .+||.+..++.||-+.- ..... ...+|+.+..+.+ + .+++.
T Consensus 448 ll~~hGg~~~~~~p~f~~~~~~l~~rG~~v~~~n~RGs~g~G~~w~~~g~~~~k~~~~~D~~a~~~~Lv~~g~~d~~rl~ 527 (686)
T PRK10115 448 LVYGYGSYGASIDADFSFSRLSLLDRGFVYAIVHVRGGGELGQQWYEDGKFLKKKNTFNDYLDACDALLKLGYGSPSLCY 527 (686)
T ss_pred EEEEECCCCCCCCCCccHHHHHHHHCCcEEEEEEcCCCCccCHHHHHhhhhhcCCCcHHHHHHHHHHHHHcCCCChHHeE
Confidence 467888765442 244444444 56999999999976433 11111 2233444333333 3 36899
Q ss_pred EEEEchhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 63 LIGRDFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 63 lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
+.|-|+||+++...+.++|++++++|...+..
T Consensus 528 i~G~S~GG~l~~~~~~~~Pdlf~A~v~~vp~~ 559 (686)
T PRK10115 528 GMGGSAGGMLMGVAINQRPELFHGVIAQVPFV 559 (686)
T ss_pred EEEECHHHHHHHHHHhcChhheeEEEecCCch
Confidence 99999999999999999999999998766554
No 139
>PRK05371 x-prolyl-dipeptidyl aminopeptidase; Provisional
Probab=98.14 E-value=2.2e-05 Score=58.98 Aligned_cols=76 Identities=16% Similarity=0.091 Sum_probs=56.0
Q ss_pred Hhh-hCCceEEEecCCCCCCCccc--hh--hHHHHHHHHHHHhC--------------------CCCeeEEEEchhHHHH
Q psy1324 19 SEF-SHEYWTVAVDIKTNFRTIAD--RY--FLVDSLKVFLDHLG--------------------RNRCILIGRDFGGSLV 73 (115)
Q Consensus 19 ~~l-~~~~~v~~~d~~g~g~s~~~--~~--~~~~~~~~~~~~~~--------------------~~~~~lvg~S~Gg~~a 73 (115)
+.+ ..||.|+..|.||.+.|... .+ ...++..++++.+. ..+|.++|.|+||.++
T Consensus 273 ~~~~~rGYaVV~~D~RGtg~SeG~~~~~~~~E~~D~~~vIeWl~~~~~~~~d~~~~~~~kq~WsnGkVGm~G~SY~G~~~ 352 (767)
T PRK05371 273 DYFLPRGFAVVYVSGIGTRGSDGCPTTGDYQEIESMKAVIDWLNGRATAYTDRTRGKEVKADWSNGKVAMTGKSYLGTLP 352 (767)
T ss_pred HHHHhCCeEEEEEcCCCCCCCCCcCccCCHHHHHHHHHHHHHHhhCCccccccccccccccCCCCCeeEEEEEcHHHHHH
Confidence 344 45999999999999998111 12 33444444444332 4699999999999999
Q ss_pred HHHHHhCcccccceEEecCCC
Q psy1324 74 WSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 74 ~~~~~~~~~~v~~~v~~~~~~ 94 (115)
+.+|...|+.++++|..++..
T Consensus 353 ~~aAa~~pp~LkAIVp~a~is 373 (767)
T PRK05371 353 NAVATTGVEGLETIIPEAAIS 373 (767)
T ss_pred HHHHhhCCCcceEEEeeCCCC
Confidence 999999888899999877654
No 140
>KOG2112|consensus
Probab=98.14 E-value=2.5e-05 Score=49.59 Aligned_cols=95 Identities=21% Similarity=0.267 Sum_probs=68.0
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCCCCC--------------------ccch--h-hHHHHHHHHHHHh
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFRT--------------------IADR--Y-FLVDSLKVFLDHL 56 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s--------------------~~~~--~-~~~~~~~~~~~~~ 56 (115)
||++||.+.+...|..+.+++.- +.+.++|..|..-.+ +.+. . ..++.+..+++.-
T Consensus 6 Ii~LHglGDsg~~~~~~~~~l~l~NiKwIcP~aP~rpvt~~~G~~~~aWfd~~~~~~~~~~d~~~~~~aa~~i~~Li~~e 85 (206)
T KOG2112|consen 6 IIFLHGLGDSGSGWAQFLKQLPLPNIKWICPTAPSRPVTLNGGAFMNAWFDIMELSSDAPEDEEGLHRAADNIANLIDNE 85 (206)
T ss_pred EEEEecCCCCCccHHHHHHcCCCCCeeEEcCCCCCCcccccCCCcccceecceeeCcccchhhhHHHHHHHHHHHHHHHH
Confidence 68999999999999999888864 888888865533211 1100 1 3344444444432
Q ss_pred ---C--CCCeeEEEEchhHHHHHHHHHhCcccccceEEecCCCC
Q psy1324 57 ---G--RNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 57 ---~--~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~ 95 (115)
+ .+++.+-|.|+||.++++.+..+|..+.++.-..+..+
T Consensus 86 ~~~Gi~~~rI~igGfs~G~a~aL~~~~~~~~~l~G~~~~s~~~p 129 (206)
T KOG2112|consen 86 PANGIPSNRIGIGGFSQGGALALYSALTYPKALGGIFALSGFLP 129 (206)
T ss_pred HHcCCCccceeEcccCchHHHHHHHHhccccccceeeccccccc
Confidence 2 35789999999999999999999888888877776654
No 141
>PF05577 Peptidase_S28: Serine carboxypeptidase S28; InterPro: IPR008758 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S28 (clan SC). The predicted active site residues for members of this family and family S10 occur in the same order in the sequence: S, D, H. These serine proteases include several eukaryotic enzymes such as lysosomal Pro-X carboxypeptidase, dipeptidyl-peptidase II, and thymus-specific serine peptidase [, , , ].; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3N2Z_B 3JYH_A 3N0T_C.
Probab=98.13 E-value=4.5e-05 Score=53.79 Aligned_cols=79 Identities=23% Similarity=0.304 Sum_probs=55.8
Q ss_pred HHHhhhC--CceEEEecCCCCCCC-ccch-------h----hHHHHHHHHHHHhC-------CCCeeEEEEchhHHHHHH
Q psy1324 17 QMSEFSH--EYWTVAVDIKTNFRT-IADR-------Y----FLVDSLKVFLDHLG-------RNRCILIGRDFGGSLVWS 75 (115)
Q Consensus 17 ~~~~l~~--~~~v~~~d~~g~g~s-~~~~-------~----~~~~~~~~~~~~~~-------~~~~~lvg~S~Gg~~a~~ 75 (115)
+...+++ +-.+++++.|-+|.| |.+. | +.++|+..+++.+. ..|++++|-|+||.++..
T Consensus 50 ~~~~lA~~~~a~~v~lEHRyYG~S~P~~~~s~~nL~yLt~~QALaD~a~F~~~~~~~~~~~~~~pwI~~GgSY~G~Laaw 129 (434)
T PF05577_consen 50 FMWELAKEFGALVVALEHRYYGKSQPFGDLSTENLRYLTSEQALADLAYFIRYVKKKYNTAPNSPWIVFGGSYGGALAAW 129 (434)
T ss_dssp HHHHHHHHHTEEEEEE--TTSTTB-TTGGGGGSTTTC-SHHHHHHHHHHHHHHHHHHTTTGCC--EEEEEETHHHHHHHH
T ss_pred hHHHHHHHcCCcEEEeehhhhcCCCCccccchhhHHhcCHHHHHHHHHHHHHHHHHhhcCCCCCCEEEECCcchhHHHHH
Confidence 3444544 888999999999999 5443 2 55677777776552 248999999999999999
Q ss_pred HHHhCcccccceEEecCCCC
Q psy1324 76 FLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 76 ~~~~~~~~v~~~v~~~~~~~ 95 (115)
+-.+||+.+.+.+.-+++..
T Consensus 130 ~r~kyP~~~~ga~ASSapv~ 149 (434)
T PF05577_consen 130 FRLKYPHLFDGAWASSAPVQ 149 (434)
T ss_dssp HHHH-TTT-SEEEEET--CC
T ss_pred HHhhCCCeeEEEEeccceee
Confidence 99999999999998887764
No 142
>KOG1553|consensus
Probab=98.12 E-value=1.1e-05 Score=55.16 Aligned_cols=68 Identities=18% Similarity=0.129 Sum_probs=51.0
Q ss_pred CCceEEEecCCCCCCC---ccch--h-hHHHHHHHHHHHhCC--CCeeEEEEchhHHHHHHHHHhCcccccceEEec
Q psy1324 23 HEYWTVAVDIKTNFRT---IADR--Y-FLVDSLKVFLDHLGR--NRCILIGRDFGGSLVWSFLDKYPELVVKSIIIN 91 (115)
Q Consensus 23 ~~~~v~~~d~~g~g~s---~~~~--~-~~~~~~~~~~~~~~~--~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~ 91 (115)
-+|.|+.++.||++.| |-.. . ....-+...++.++. +.+++.|+|.||..+..+|..||+ |+++|+-.
T Consensus 267 lgYsvLGwNhPGFagSTG~P~p~n~~nA~DaVvQfAI~~Lgf~~edIilygWSIGGF~~~waAs~YPd-VkavvLDA 342 (517)
T KOG1553|consen 267 LGYSVLGWNHPGFAGSTGLPYPVNTLNAADAVVQFAIQVLGFRQEDIILYGWSIGGFPVAWAASNYPD-VKAVVLDA 342 (517)
T ss_pred hCceeeccCCCCccccCCCCCcccchHHHHHHHHHHHHHcCCCccceEEEEeecCCchHHHHhhcCCC-ceEEEeec
Confidence 3999999999999988 2221 1 222333444566664 689999999999999999999998 88877543
No 143
>PRK10439 enterobactin/ferric enterobactin esterase; Provisional
Probab=98.11 E-value=6.4e-05 Score=52.85 Aligned_cols=51 Identities=16% Similarity=0.173 Sum_probs=41.8
Q ss_pred hHHHHHHHHHHHh-----CCCCeeEEEEchhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 44 FLVDSLKVFLDHL-----GRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 44 ~~~~~~~~~~~~~-----~~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
.+.+++.-.+++. +.++.++.|+||||..++.++.++|+++.+++.+++..
T Consensus 268 ~l~~eLlP~I~~~y~~~~d~~~~~IaG~S~GGl~AL~~al~~Pd~Fg~v~s~Sgs~ 323 (411)
T PRK10439 268 AVQQELLPQVRAIAPFSDDADRTVVAGQSFGGLAALYAGLHWPERFGCVLSQSGSF 323 (411)
T ss_pred HHHHHHHHHHHHhCCCCCCccceEEEEEChHHHHHHHHHHhCcccccEEEEeccce
Confidence 5566666666553 23578999999999999999999999999999999764
No 144
>KOG3975|consensus
Probab=98.11 E-value=5.4e-05 Score=49.56 Aligned_cols=91 Identities=13% Similarity=0.183 Sum_probs=63.8
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC----CceEEEecCCCCCCCc-----------cchh---hHHHHHHHHHHHh--CCCC
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH----EYWTVAVDIKTNFRTI-----------ADRY---FLVDSLKVFLDHL--GRNR 60 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~----~~~v~~~d~~g~g~s~-----------~~~~---~~~~~~~~~~~~~--~~~~ 60 (115)
+++++|.++....|.++.+.+.. ...++.+...||...| .+.| ++++.-.++++.. ...+
T Consensus 32 i~~IpGNPG~~gFY~~F~~~L~~~l~~r~~~wtIsh~~H~~~P~sl~~~~s~~~~eifsL~~QV~HKlaFik~~~Pk~~k 111 (301)
T KOG3975|consen 32 IVWIPGNPGLLGFYTEFARHLHLNLIDRLPVWTISHAGHALMPASLREDHSHTNEEIFSLQDQVDHKLAFIKEYVPKDRK 111 (301)
T ss_pred EEEecCCCCchhHHHHHHHHHHHhcccccceeEEeccccccCCcccccccccccccccchhhHHHHHHHHHHHhCCCCCE
Confidence 47899999999999999887743 3668887766664432 1113 6666666777665 2468
Q ss_pred eeEEEEchhHHHHHHHHHhC-c-ccccceEEec
Q psy1324 61 CILIGRDFGGSLVWSFLDKY-P-ELVVKSIIIN 91 (115)
Q Consensus 61 ~~lvg~S~Gg~~a~~~~~~~-~-~~v~~~v~~~ 91 (115)
++++|||.|+++.+..+... + -.+.+++++=
T Consensus 112 i~iiGHSiGaYm~Lqil~~~k~~~~vqKa~~LF 144 (301)
T KOG3975|consen 112 IYIIGHSIGAYMVLQILPSIKLVFSVQKAVLLF 144 (301)
T ss_pred EEEEecchhHHHHHHHhhhcccccceEEEEEec
Confidence 99999999999999988742 2 2355555543
No 145
>PTZ00472 serine carboxypeptidase (CBP1); Provisional
Probab=98.10 E-value=3.2e-05 Score=55.08 Aligned_cols=94 Identities=15% Similarity=0.194 Sum_probs=62.2
Q ss_pred CEeecCCCCCHhhHHHHHH-----------h-------hhCCceEEEecCC-CCCCC--ccchh-----hHHHHHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMS-----------E-------FSHEYWTVAVDIK-TNFRT--IADRY-----FLVDSLKVFLD 54 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~-----------~-------l~~~~~v~~~d~~-g~g~s--~~~~~-----~~~~~~~~~~~ 54 (115)
+|+++|.++....+-.+.+ . ..+...++.+|.| |+|.| ....+ +.++++.++++
T Consensus 80 ~lwlnGGPG~ss~~G~f~E~GP~~i~~~~~~~~~n~~sW~~~~~~l~iDqP~G~G~S~~~~~~~~~~~~~~a~d~~~~l~ 159 (462)
T PTZ00472 80 LLWMTGGPGCSSMFALLAENGPCLMNETTGDIYNNTYSWNNEAYVIYVDQPAGVGFSYADKADYDHNESEVSEDMYNFLQ 159 (462)
T ss_pred EEEECCCCcHHHHHhhhccCCCeEEeCCCCceeECCcccccccCeEEEeCCCCcCcccCCCCCCCCChHHHHHHHHHHHH
Confidence 5789999888776643322 1 1224678899976 77777 11111 56666666665
Q ss_pred Hh-------CCCCeeEEEEchhHHHHHHHHHhCc----------ccccceEEecCCC
Q psy1324 55 HL-------GRNRCILIGRDFGGSLVWSFLDKYP----------ELVVKSIIINVPH 94 (115)
Q Consensus 55 ~~-------~~~~~~lvg~S~Gg~~a~~~~~~~~----------~~v~~~v~~~~~~ 94 (115)
.+ ...+++++|||+||..+..++.+-- -.++++++-++..
T Consensus 160 ~f~~~~p~~~~~~~~i~GeSygG~y~p~~a~~i~~~n~~~~~~~inLkGi~IGNg~~ 216 (462)
T PTZ00472 160 AFFGSHEDLRANDLFVVGESYGGHYAPATAYRINMGNKKGDGLYINLAGLAVGNGLT 216 (462)
T ss_pred HHHHhCccccCCCEEEEeecchhhhHHHHHHHHHhhccccCCceeeeEEEEEecccc
Confidence 33 3479999999999998877777631 1377887777654
No 146
>PF12048 DUF3530: Protein of unknown function (DUF3530); InterPro: IPR022529 This family of proteins is functionally uncharacterised. This protein is found in bacteria. Proteins in this family are typically between 272 to 336 amino acids in length. These proteins are distantly related to alpa/beta hydrolases so they may act as enzymes.
Probab=98.09 E-value=0.00016 Score=49.09 Aligned_cols=99 Identities=16% Similarity=0.269 Sum_probs=70.1
Q ss_pred CEeecCCCCCHh---hHHHHHHhhhC-CceEEEecCCCCCC---------------------C-cc-----------ch-
Q psy1324 1 MLFLHGFPESWY---IWKHQMSEFSH-EYWTVAVDIKTNFR---------------------T-IA-----------DR- 42 (115)
Q Consensus 1 vl~~hG~~~~~~---~~~~~~~~l~~-~~~v~~~d~~g~g~---------------------s-~~-----------~~- 42 (115)
||++||.+.+.+ ...++-+.|.+ |+.++++.+|.--. + +. ..
T Consensus 90 vIilp~~g~~~d~p~~i~~LR~~L~~~GW~Tlsit~P~~~~~~~p~~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~~~~~ 169 (310)
T PF12048_consen 90 VIILPDWGEHPDWPGLIAPLRRELPDHGWATLSITLPDPAPPASPNRATEAEEVPSAGDQQLSQPSDEPSPASAQEAEAR 169 (310)
T ss_pred EEEecCCCCCCCcHhHHHHHHHHhhhcCceEEEecCCCcccccCCccCCCCCCCCCCCCCCcCCCCCCCccccccHhHHh
Confidence 689999987753 35566667776 99999998887110 0 00 01
Q ss_pred --h-----hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhCcc-cccceEEecCCCChhHH
Q psy1324 43 --Y-----FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPE-LVVKSIIINVPHPAVFK 99 (115)
Q Consensus 43 --~-----~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~~-~v~~~v~~~~~~~~~~~ 99 (115)
+ ..++....+.+..+.++++++||+.|+..+..++.+.+. .++++|++++..+....
T Consensus 170 ~~~~~~~~ari~Aa~~~~~~~~~~~ivlIg~G~gA~~~~~~la~~~~~~~daLV~I~a~~p~~~~ 234 (310)
T PF12048_consen 170 EAYEERLFARIEAAIAFAQQQGGKNIVLIGHGTGAGWAARYLAEKPPPMPDALVLINAYWPQPDR 234 (310)
T ss_pred HHHHHHHHHHHHHHHHHHHhcCCceEEEEEeChhHHHHHHHHhcCCCcccCeEEEEeCCCCcchh
Confidence 1 233334444444455679999999999999999999764 59999999998877766
No 147
>COG3458 Acetyl esterase (deacetylase) [Secondary metabolites biosynthesis, transport, and catabolism]
Probab=98.09 E-value=2.1e-06 Score=56.58 Aligned_cols=87 Identities=14% Similarity=0.202 Sum_probs=61.7
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC-------ccc-h---h------------------hHHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT-------IAD-R---Y------------------FLVDSLKV 51 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s-------~~~-~---~------------------~~~~~~~~ 51 (115)
||-.||+++....|..+...-..+|.++.+|.||.|.+ |.+ . + ..+-...+
T Consensus 86 vV~fhGY~g~~g~~~~~l~wa~~Gyavf~MdvRGQg~~~~dt~~~p~~~s~pG~mtrGilD~kd~yyyr~v~~D~~~ave 165 (321)
T COG3458 86 VVQFHGYGGRGGEWHDMLHWAVAGYAVFVMDVRGQGSSSQDTADPPGGPSDPGFMTRGILDRKDTYYYRGVFLDAVRAVE 165 (321)
T ss_pred EEEEeeccCCCCCccccccccccceeEEEEecccCCCccccCCCCCCCCcCCceeEeecccCCCceEEeeehHHHHHHHH
Confidence 46689999998888777777777999999999998765 222 0 1 11222222
Q ss_pred HHHH---hCCCCeeEEEEchhHHHHHHHHHhCcccccceE
Q psy1324 52 FLDH---LGRNRCILIGRDFGGSLVWSFLDKYPELVVKSI 88 (115)
Q Consensus 52 ~~~~---~~~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v 88 (115)
++-. ++.+++.+.|.|.||.+++..+...|+ +++++
T Consensus 166 ~~~sl~~vde~Ri~v~G~SqGGglalaaaal~~r-ik~~~ 204 (321)
T COG3458 166 ILASLDEVDEERIGVTGGSQGGGLALAAAALDPR-IKAVV 204 (321)
T ss_pred HHhccCccchhheEEeccccCchhhhhhhhcChh-hhccc
Confidence 3322 345799999999999999999888764 55544
No 148
>COG3243 PhaC Poly(3-hydroxyalkanoate) synthetase [Lipid metabolism]
Probab=98.08 E-value=1.3e-05 Score=55.80 Aligned_cols=80 Identities=15% Similarity=0.186 Sum_probs=61.1
Q ss_pred HHHHhh-hCCceEEEecCCCCCCC-c---cchh---hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhCccc-ccc
Q psy1324 16 HQMSEF-SHEYWTVAVDIKTNFRT-I---ADRY---FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPEL-VVK 86 (115)
Q Consensus 16 ~~~~~l-~~~~~v~~~d~~g~g~s-~---~~~~---~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~~~-v~~ 86 (115)
.++..+ .+|..|+.+++++-..+ . .++| ...+.+..+.+..+.+++.++|+|.||.++..++..++.+ |+.
T Consensus 130 s~V~~l~~~g~~vfvIsw~nPd~~~~~~~~edYi~e~l~~aid~v~~itg~~~InliGyCvGGtl~~~ala~~~~k~I~S 209 (445)
T COG3243 130 SLVRWLLEQGLDVFVISWRNPDASLAAKNLEDYILEGLSEAIDTVKDITGQKDINLIGYCVGGTLLAAALALMAAKRIKS 209 (445)
T ss_pred cHHHHHHHcCCceEEEeccCchHhhhhccHHHHHHHHHHHHHHHHHHHhCccccceeeEecchHHHHHHHHhhhhccccc
Confidence 344544 45999999999876655 1 1123 5556666666777889999999999999999999998877 999
Q ss_pred eEEecCCCC
Q psy1324 87 SIIINVPHP 95 (115)
Q Consensus 87 ~v~~~~~~~ 95 (115)
+.++.++..
T Consensus 210 ~T~lts~~D 218 (445)
T COG3243 210 LTLLTSPVD 218 (445)
T ss_pred ceeeecchh
Confidence 998887653
No 149
>KOG3724|consensus
Probab=98.08 E-value=3.5e-05 Score=57.31 Aligned_cols=94 Identities=21% Similarity=0.283 Sum_probs=55.0
Q ss_pred CEeecCCCCCHhhHHHHHHhhh-----------------CCceEEEecCCCCCCC-ccchh-hHHHHHHHHHHHh-----
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFS-----------------HEYWTVAVDIKTNFRT-IADRY-FLVDSLKVFLDHL----- 56 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~-----------------~~~~v~~~d~~g~g~s-~~~~~-~~~~~~~~~~~~~----- 56 (115)
|+|++|..++-..-+.++.... ..++.+++|.-+--.. ..+.. ++++.+.+.++.+
T Consensus 92 VLFIPGNAGSyKQvRSiAS~a~n~y~~~~~e~t~~~d~~~~~DFFaVDFnEe~tAm~G~~l~dQtEYV~dAIk~ILslYr 171 (973)
T KOG3724|consen 92 VLFIPGNAGSYKQVRSIASVAQNAYQGGPFEKTEDRDNPFSFDFFAVDFNEEFTAMHGHILLDQTEYVNDAIKYILSLYR 171 (973)
T ss_pred EEEecCCCCchHHHHHHHHHHhhhhcCCchhhhhcccCccccceEEEcccchhhhhccHhHHHHHHHHHHHHHHHHHHhh
Confidence 6899999887665554433221 1466777776542111 11111 3333333333221
Q ss_pred C--------CCCeeEEEEchhHHHHHHHHHhC---cccccceEEecCCC
Q psy1324 57 G--------RNRCILIGRDFGGSLVWSFLDKY---PELVVKSIIINVPH 94 (115)
Q Consensus 57 ~--------~~~~~lvg~S~Gg~~a~~~~~~~---~~~v~~~v~~~~~~ 94 (115)
+ -..++++||||||.+|...+-.. +..|..++..++|+
T Consensus 172 ~~~e~~~p~P~sVILVGHSMGGiVAra~~tlkn~~~~sVntIITlssPH 220 (973)
T KOG3724|consen 172 GEREYASPLPHSVILVGHSMGGIVARATLTLKNEVQGSVNTIITLSSPH 220 (973)
T ss_pred cccccCCCCCceEEEEeccchhHHHHHHHhhhhhccchhhhhhhhcCcc
Confidence 1 12489999999999998876543 45577788888775
No 150
>PF03959 FSH1: Serine hydrolase (FSH1); InterPro: IPR005645 This entry represents proteins belonging to the AB hydrolase family. It consists of serine hydrolases of unknown specificity [, ] and includes uncharacterised proteins.; PDB: 1YCD_A.
Probab=98.06 E-value=3.8e-05 Score=49.29 Aligned_cols=95 Identities=21% Similarity=0.245 Sum_probs=49.5
Q ss_pred CEeecCCCCCHhhHHHHHH----hhhC-CceEEEecCCCCC---C--Ccc-----------ch-------------h---
Q psy1324 1 MLFLHGFPESWYIWKHQMS----EFSH-EYWTVAVDIKTNF---R--TIA-----------DR-------------Y--- 43 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~----~l~~-~~~v~~~d~~g~g---~--s~~-----------~~-------------~--- 43 (115)
||++||++++.+.++.... .|.+ +++.+.+|-|--- . .+. .. +
T Consensus 7 iLcLHG~~~na~if~~q~~~l~~~l~~~~~ef~f~dgP~~~~~~~~~~~~~~~~~~~~~~~~~~~~W~~~~~~~~~~~~~ 86 (212)
T PF03959_consen 7 ILCLHGYGQNAEIFRQQTSALRKALKKLDFEFVFVDGPHEVPPGPGIEPFSSEAESAFGDPGPFYSWWDPDDDDHEYEGL 86 (212)
T ss_dssp EEEE--TT--HHHHHHHTHHHHHHHHHTT-EEEEE--SEE---GGG-SS---HHHHHHHHTT--EESS---S-SGGG---
T ss_pred EEEeCCCCcCHHHHHHHHHHHHHHHhhCcEEEEEecCCcccCCcccccccccccccccCCCCcceeeeecCCCcccccCH
Confidence 6899999999999976655 4455 7888888755211 0 000 00 1
Q ss_pred -hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhCc--------ccccceEEecCCCCh
Q psy1324 44 -FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYP--------ELVVKSIIINVPHPA 96 (115)
Q Consensus 44 -~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~--------~~v~~~v~~~~~~~~ 96 (115)
+.++.+.+.+++.+ .=.-++|+|.||.+|..++.... ..++-+|++++..+.
T Consensus 87 ~~sl~~l~~~i~~~G-PfdGvlGFSQGA~lAa~ll~~~~~~~~~~~~~~~kf~V~~sg~~p~ 147 (212)
T PF03959_consen 87 DESLDYLRDYIEENG-PFDGVLGFSQGAALAALLLALQQRGRPDGAHPPFKFAVFISGFPPP 147 (212)
T ss_dssp HHHHHHHHHHHHHH----SEEEEETHHHHHHHHHHHHHHHHST--T----SEEEEES----E
T ss_pred HHHHHHHHHHHHhcC-CeEEEEeecHHHHHHHHHHHHHHhhcccccCCCceEEEEEcccCCC
Confidence 33344444444433 23458999999999998886532 236778888877654
No 151
>KOG4627|consensus
Probab=98.06 E-value=9.1e-06 Score=51.80 Aligned_cols=91 Identities=11% Similarity=0.066 Sum_probs=57.5
Q ss_pred CEeecCCC---CCHhhHHHHHH-hhhCCceEEEecCCCCCCCccch-h-----hHHHHHHHHHHHhCC-CCeeEEEEchh
Q psy1324 1 MLFLHGFP---ESWYIWKHQMS-EFSHEYWTVAVDIKTNFRTIADR-Y-----FLVDSLKVFLDHLGR-NRCILIGRDFG 69 (115)
Q Consensus 1 vl~~hG~~---~~~~~~~~~~~-~l~~~~~v~~~d~~g~g~s~~~~-~-----~~~~~~~~~~~~~~~-~~~~lvg~S~G 69 (115)
.||+||.- ++...--..+. .+..+|++..+++ +.+|... . +..+-+..+++.... +.+.+-|||.|
T Consensus 70 fIfIHGGYW~~g~rk~clsiv~~a~~~gY~vasvgY---~l~~q~htL~qt~~~~~~gv~filk~~~n~k~l~~gGHSaG 146 (270)
T KOG4627|consen 70 FIFIHGGYWQEGDRKMCLSIVGPAVRRGYRVASVGY---NLCPQVHTLEQTMTQFTHGVNFILKYTENTKVLTFGGHSAG 146 (270)
T ss_pred EEEEecchhhcCchhcccchhhhhhhcCeEEEEecc---CcCcccccHHHHHHHHHHHHHHHHHhcccceeEEEcccchH
Confidence 37899862 33332222233 3344899988754 4343332 2 445555555555544 45667889999
Q ss_pred HHHHHHHHHhC-cccccceEEecCCC
Q psy1324 70 GSLVWSFLDKY-PELVVKSIIINVPH 94 (115)
Q Consensus 70 g~~a~~~~~~~-~~~v~~~v~~~~~~ 94 (115)
+.++..+..+. ..+|.+++++++..
T Consensus 147 AHLa~qav~R~r~prI~gl~l~~GvY 172 (270)
T KOG4627|consen 147 AHLAAQAVMRQRSPRIWGLILLCGVY 172 (270)
T ss_pred HHHHHHHHHHhcCchHHHHHHHhhHh
Confidence 99999988874 56799998888764
No 152
>cd00741 Lipase Lipase. Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation", the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=98.06 E-value=1.6e-05 Score=48.36 Aligned_cols=43 Identities=14% Similarity=0.101 Sum_probs=34.6
Q ss_pred hCCCCeeEEEEchhHHHHHHHHHhCcc----cccceEEecCCCChhH
Q psy1324 56 LGRNRCILIGRDFGGSLVWSFLDKYPE----LVVKSIIINVPHPAVF 98 (115)
Q Consensus 56 ~~~~~~~lvg~S~Gg~~a~~~~~~~~~----~v~~~v~~~~~~~~~~ 98 (115)
.+..+++++|||+||.+|..++....+ ....++.++++.....
T Consensus 25 ~p~~~i~v~GHSlGg~lA~l~a~~~~~~~~~~~~~~~~fg~p~~~~~ 71 (153)
T cd00741 25 YPDYKIHVTGHSLGGALAGLAGLDLRGRGLGRLVRVYTFGPPRVGNA 71 (153)
T ss_pred CCCCeEEEEEcCHHHHHHHHHHHHHHhccCCCceEEEEeCCCcccch
Confidence 356799999999999999998888755 5777888888875443
No 153
>KOG2369|consensus
Probab=98.03 E-value=1.2e-05 Score=56.58 Aligned_cols=84 Identities=19% Similarity=0.345 Sum_probs=54.3
Q ss_pred hhHHHHHHhhhC-Cce----E--EEecCCC-CCCC-ccchh--hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhC
Q psy1324 12 YIWKHQMSEFSH-EYW----T--VAVDIKT-NFRT-IADRY--FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKY 80 (115)
Q Consensus 12 ~~~~~~~~~l~~-~~~----v--~~~d~~g-~g~s-~~~~~--~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~ 80 (115)
..|..+++.+.. ||+ + ...|+|- +..+ ..+.| .+...+....+.-+.+++++++||||+.+...++..+
T Consensus 124 ~~w~~~i~~lv~~GYe~~~~l~ga~YDwRls~~~~e~rd~yl~kLK~~iE~~~~~~G~kkVvlisHSMG~l~~lyFl~w~ 203 (473)
T KOG2369|consen 124 WYWHELIENLVGIGYERGKTLFGAPYDWRLSYHNSEERDQYLSKLKKKIETMYKLNGGKKVVLISHSMGGLYVLYFLKWV 203 (473)
T ss_pred HHHHHHHHHHHhhCcccCceeeccccchhhccCChhHHHHHHHHHHHHHHHHHHHcCCCceEEEecCCccHHHHHHHhcc
Confidence 478888888865 665 3 3346653 2222 22223 3333444444444669999999999999999999998
Q ss_pred cc--------cccceEEecCCCC
Q psy1324 81 PE--------LVVKSIIINVPHP 95 (115)
Q Consensus 81 ~~--------~v~~~v~~~~~~~ 95 (115)
+. -|++++-++++..
T Consensus 204 ~~~~~~W~~k~I~sfvnig~p~l 226 (473)
T KOG2369|consen 204 EAEGPAWCDKYIKSFVNIGAPWL 226 (473)
T ss_pred cccchhHHHHHHHHHHccCchhc
Confidence 76 2666666665543
No 154
>PF05677 DUF818: Chlamydia CHLPS protein (DUF818); InterPro: IPR008536 This family of unknown function includes several Chlamydia CHLPS proteins and Legionella SidB proteins.
Probab=97.98 E-value=5.9e-05 Score=51.41 Aligned_cols=58 Identities=19% Similarity=0.143 Sum_probs=41.2
Q ss_pred CceEEEecCCCCCCC--ccchhhHHHHHHHHHHHh-------CCCCeeEEEEchhHHHHHHHHHhCc
Q psy1324 24 EYWTVAVDIKTNFRT--IADRYFLVDSLKVFLDHL-------GRNRCILIGRDFGGSLVWSFLDKYP 81 (115)
Q Consensus 24 ~~~v~~~d~~g~g~s--~~~~~~~~~~~~~~~~~~-------~~~~~~lvg~S~Gg~~a~~~~~~~~ 81 (115)
+-+++.+++||.|.| +....+++++..+.++.+ +.+++.+-|||+||.++..++.++.
T Consensus 171 ~aNvl~fNYpGVg~S~G~~s~~dLv~~~~a~v~yL~d~~~G~ka~~Ii~yG~SLGG~Vqa~AL~~~~ 237 (365)
T PF05677_consen 171 GANVLVFNYPGVGSSTGPPSRKDLVKDYQACVRYLRDEEQGPKAKNIILYGHSLGGGVQAEALKKEV 237 (365)
T ss_pred CCcEEEECCCccccCCCCCCHHHHHHHHHHHHHHHHhcccCCChheEEEeeccccHHHHHHHHHhcc
Confidence 899999999999999 211114444444333333 2368999999999999998877753
No 155
>KOG3847|consensus
Probab=97.94 E-value=1.2e-05 Score=54.13 Aligned_cols=93 Identities=14% Similarity=0.250 Sum_probs=63.5
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCCCCC------cc--ch-----h-----------------------
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFRT------IA--DR-----Y----------------------- 43 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s------~~--~~-----~----------------------- 43 (115)
+||-||.++....|..+.-.|+. ||.|.+++.|..... +. +. +
T Consensus 121 vvFSHGLggsRt~YSa~c~~LAShG~VVaavEHRD~SA~~Ty~~~~~~~n~~lveq~~~ir~v~~~ekef~irNeqv~~R 200 (399)
T KOG3847|consen 121 VVFSHGLGGSRTLYSAYCTSLASHGFVVAAVEHRDRSACWTYVLKEKHENEPLVEQWIKIRLVEANEKEFHIRNEQVGQR 200 (399)
T ss_pred EEEecccccchhhHHHHhhhHhhCceEEEEeecccCcceeEEEecccccCCcccccceEeeeeccCceeEEeeCHHHHHH
Confidence 58999999999999998888865 999999998876433 11 00 0
Q ss_pred -hHHHHHHHHHHHhC------------------------CCCeeEEEEchhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 44 -FLVDSLKVFLDHLG------------------------RNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 44 -~~~~~~~~~~~~~~------------------------~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
........+++.+. ..++.++|||+||..+......+.+ ++..|.+++--
T Consensus 201 ~~Ec~~aL~il~~i~~g~~~~~~L~g~~~~~~~~K~nl~~s~~aViGHSFGgAT~i~~ss~~t~-FrcaI~lD~WM 275 (399)
T KOG3847|consen 201 AQECQKALKILEQINDGGTPDNVLPGNNSDLEQLKGNLDTSQAAVIGHSFGGATSIASSSSHTD-FRCAIALDAWM 275 (399)
T ss_pred HHHHHHHHHHHHHhhcCCCchhcccCccccHHHHhcchhhhhhhheeccccchhhhhhhccccc-eeeeeeeeeee
Confidence 11112223333331 1357899999999999988887755 66666677543
No 156
>COG4188 Predicted dienelactone hydrolase [General function prediction only]
Probab=97.91 E-value=2e-05 Score=54.06 Aligned_cols=81 Identities=16% Similarity=0.148 Sum_probs=55.6
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCCCCC-------c----cch-h-hHHHHHHHHHH------------
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFRT-------I----ADR-Y-FLVDSLKVFLD------------ 54 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s-------~----~~~-~-~~~~~~~~~~~------------ 54 (115)
|++=||.+...+.+....+.+++ +|.|..++.||.... . ... + +...++..+++
T Consensus 74 vvlshG~Gs~~~~f~~~A~~lAs~Gf~Va~~~hpgs~~~~~~~~~~~~~~~~p~~~~erp~dis~lLd~L~~~~~sP~l~ 153 (365)
T COG4188 74 VVLSHGSGSYVTGFAWLAEHLASYGFVVAAPDHPGSNAGGAPAAYAGPGSYAPAEWWERPLDISALLDALLQLTASPALA 153 (365)
T ss_pred EEecCCCCCCccchhhhHHHHhhCceEEEeccCCCcccccCChhhcCCcccchhhhhcccccHHHHHHHHHHhhcCcccc
Confidence 57789999999999999998876 999999999984221 1 100 1 22222222221
Q ss_pred -HhCCCCeeEEEEchhHHHHHHHHHhCc
Q psy1324 55 -HLGRNRCILIGRDFGGSLVWSFLDKYP 81 (115)
Q Consensus 55 -~~~~~~~~lvg~S~Gg~~a~~~~~~~~ 81 (115)
+++..+|.++|||+||+.++..+--..
T Consensus 154 ~~ld~~~Vgv~GhS~GG~T~m~laGA~~ 181 (365)
T COG4188 154 GRLDPQRVGVLGHSFGGYTAMELAGAEL 181 (365)
T ss_pred cccCccceEEEecccccHHHHHhccccc
Confidence 223468999999999999988876643
No 157
>PLN02517 phosphatidylcholine-sterol O-acyltransferase
Probab=97.86 E-value=7.1e-05 Score=54.43 Aligned_cols=84 Identities=14% Similarity=0.261 Sum_probs=52.7
Q ss_pred hHHHHHHhhhC-CceE-----EEecCCCCCCCcc--chh-hHHHHHHHHHHHh-CCCCeeEEEEchhHHHHHHHHHhCc-
Q psy1324 13 IWKHQMSEFSH-EYWT-----VAVDIKTNFRTIA--DRY-FLVDSLKVFLDHL-GRNRCILIGRDFGGSLVWSFLDKYP- 81 (115)
Q Consensus 13 ~~~~~~~~l~~-~~~v-----~~~d~~g~g~s~~--~~~-~~~~~~~~~~~~~-~~~~~~lvg~S~Gg~~a~~~~~~~~- 81 (115)
.|..+++.|.+ ||.- ...|+|--...+. +.| ..++.+.+.+-+. +.++++++|||||+.+++.++....
T Consensus 157 vw~kLIe~L~~iGY~~~nL~gAPYDWRls~~~le~rd~YF~rLK~lIE~ay~~nggkKVVLV~HSMGglv~lyFL~wv~~ 236 (642)
T PLN02517 157 VWAVLIANLARIGYEEKNMYMAAYDWRLSFQNTEVRDQTLSRLKSNIELMVATNGGKKVVVVPHSMGVLYFLHFMKWVEA 236 (642)
T ss_pred eHHHHHHHHHHcCCCCCceeecccccccCccchhhhhHHHHHHHHHHHHHHHHcCCCeEEEEEeCCchHHHHHHHHhccc
Confidence 56888888876 7762 1224431111111 223 4444444444444 4689999999999999999987531
Q ss_pred --------------ccccceEEecCCCCh
Q psy1324 82 --------------ELVVKSIIINVPHPA 96 (115)
Q Consensus 82 --------------~~v~~~v~~~~~~~~ 96 (115)
+.|++.|.++++...
T Consensus 237 ~~~~gG~gG~~W~dKyI~s~I~Iagp~lG 265 (642)
T PLN02517 237 PAPMGGGGGPGWCAKHIKAVMNIGGPFLG 265 (642)
T ss_pred cccccCCcchHHHHHHHHHheecccccCC
Confidence 238889999887644
No 158
>cd00312 Esterase_lipase Esterases and lipases (includes fungal lipases, cholinesterases, etc.) These enzymes act on carboxylic esters (EC: 3.1.1.-). The catalytic apparatus involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.These catalytic residues are responsible for the nucleophilic attack on the carbonyl carbon atom of the ester bond. In contrast with other alpha/beta hydrolase fold family members, p-nitrobenzyl esterase and acetylcholine esterase have a Glu instead of Asp at the active site carboxylate.
Probab=97.86 E-value=6.8e-05 Score=53.54 Aligned_cols=94 Identities=17% Similarity=0.169 Sum_probs=56.0
Q ss_pred CEeecCCC---CCHhh--HHHHHHhhhCCceEEEecCC-C---CCCCcc----chh------hHHHHHHHHHHHhCC--C
Q psy1324 1 MLFLHGFP---ESWYI--WKHQMSEFSHEYWTVAVDIK-T---NFRTIA----DRY------FLVDSLKVFLDHLGR--N 59 (115)
Q Consensus 1 vl~~hG~~---~~~~~--~~~~~~~l~~~~~v~~~d~~-g---~g~s~~----~~~------~~~~~~~~~~~~~~~--~ 59 (115)
||++||.+ ++... ...+..... ++.|+.+++| | +..... ..+ ..++.+.+-++.++. +
T Consensus 98 ~v~ihGG~~~~g~~~~~~~~~~~~~~~-~~~vv~~~yRlg~~g~~~~~~~~~~~n~g~~D~~~al~wv~~~i~~fggd~~ 176 (493)
T cd00312 98 MVWIHGGGFMFGSGSLYPGDGLAREGD-NVIVVSINYRLGVLGFLSTGDIELPGNYGLKDQRLALKWVQDNIAAFGGDPD 176 (493)
T ss_pred EEEEcCCccccCCCCCCChHHHHhcCC-CEEEEEecccccccccccCCCCCCCcchhHHHHHHHHHHHHHHHHHhCCCcc
Confidence 58999963 22222 222222211 3888899888 2 222211 111 333344444455543 5
Q ss_pred CeeEEEEchhHHHHHHHHHhC--cccccceEEecCCCC
Q psy1324 60 RCILIGRDFGGSLVWSFLDKY--PELVVKSIIINVPHP 95 (115)
Q Consensus 60 ~~~lvg~S~Gg~~a~~~~~~~--~~~v~~~v~~~~~~~ 95 (115)
+|+++|+|.||.++..++... +..++++|+.++...
T Consensus 177 ~v~~~G~SaG~~~~~~~~~~~~~~~lf~~~i~~sg~~~ 214 (493)
T cd00312 177 SVTIFGESAGGASVSLLLLSPDSKGLFHRAISQSGSAL 214 (493)
T ss_pred eEEEEeecHHHHHhhhHhhCcchhHHHHHHhhhcCCcc
Confidence 899999999999988887763 456888888886543
No 159
>PF01764 Lipase_3: Lipase (class 3); InterPro: IPR002921 Triglyceride lipases are lipolytic enzymes that hydrolyse ester linkages of triglycerides []. Lipases are widely distributed in animals, plants and prokaryotes. This family of lipases have been called Class 3 as they are not closely related to other lipase families.; GO: 0004806 triglyceride lipase activity, 0006629 lipid metabolic process; PDB: 1LGY_A 1DTE_A 1DT5_F 4DYH_B 1DU4_C 4EA6_B 1GT6_B 1EIN_A 1DT3_A 1TIB_A ....
Probab=97.85 E-value=5.1e-05 Score=45.17 Aligned_cols=52 Identities=19% Similarity=0.321 Sum_probs=32.6
Q ss_pred hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhCcc------cccceEEecCCCC
Q psy1324 44 FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPE------LVVKSIIINVPHP 95 (115)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~~------~v~~~v~~~~~~~ 95 (115)
...+.+.+..++.+..++++.|||+||.+|..++....+ ..-.++..++|..
T Consensus 49 ~~~~~l~~~~~~~~~~~i~itGHSLGGalA~l~a~~l~~~~~~~~~~~~~~~fg~P~~ 106 (140)
T PF01764_consen 49 QILDALKELVEKYPDYSIVITGHSLGGALASLAAADLASHGPSSSSNVKCYTFGAPRV 106 (140)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHHHHCTTTSTTTEEEEEES-S--
T ss_pred HHHHHHHHHHhcccCccchhhccchHHHHHHHHHHhhhhcccccccceeeeecCCccc
Confidence 344555555555555689999999999998888887432 2334445555544
No 160
>KOG1515|consensus
Probab=97.82 E-value=0.00021 Score=48.95 Aligned_cols=92 Identities=17% Similarity=0.205 Sum_probs=62.8
Q ss_pred CEeecCCCC-----CHhhHHHHHHhhhC--CceEEEecCCCCCCCccch----h-hHHHHHHHHHHH------hCCCCee
Q psy1324 1 MLFLHGFPE-----SWYIWKHQMSEFSH--EYWTVAVDIKTNFRTIADR----Y-FLVDSLKVFLDH------LGRNRCI 62 (115)
Q Consensus 1 vl~~hG~~~-----~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~----~-~~~~~~~~~~~~------~~~~~~~ 62 (115)
||++||.+- ....|..+..+++. +..++++|+|-- |+.. | +-.+.+..+.+. .+.++++
T Consensus 93 lvyfHGGGf~~~S~~~~~y~~~~~~~a~~~~~vvvSVdYRLA---PEh~~Pa~y~D~~~Al~w~~~~~~~~~~~D~~rv~ 169 (336)
T KOG1515|consen 93 LVYFHGGGFCLGSANSPAYDSFCTRLAAELNCVVVSVDYRLA---PEHPFPAAYDDGWAALKWVLKNSWLKLGADPSRVF 169 (336)
T ss_pred EEEEeCCccEeCCCCCchhHHHHHHHHHHcCeEEEecCcccC---CCCCCCccchHHHHHHHHHHHhHHHHhCCCcccEE
Confidence 589999863 35668888888754 778888887743 2222 2 333333333332 2457899
Q ss_pred EEEEchhHHHHHHHHHhC------cccccceEEecCCCC
Q psy1324 63 LIGRDFGGSLVWSFLDKY------PELVVKSIIINVPHP 95 (115)
Q Consensus 63 lvg~S~Gg~~a~~~~~~~------~~~v~~~v~~~~~~~ 95 (115)
++|-|.||.+|..++.+. +-++++.|++-|..-
T Consensus 170 l~GDSaGGNia~~va~r~~~~~~~~~ki~g~ili~P~~~ 208 (336)
T KOG1515|consen 170 LAGDSAGGNIAHVVAQRAADEKLSKPKIKGQILIYPFFQ 208 (336)
T ss_pred EEccCccHHHHHHHHHHHhhccCCCcceEEEEEEecccC
Confidence 999999999998888773 246899999887654
No 161
>COG3150 Predicted esterase [General function prediction only]
Probab=97.79 E-value=0.00038 Score=43.08 Aligned_cols=84 Identities=17% Similarity=0.182 Sum_probs=56.1
Q ss_pred CEeecCCCCCHhhHHHHHH--hhhC---CceEEEecCCCCCCCccchhhHHHHHHHHHHHhCCCCeeEEEEchhHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMS--EFSH---EYWTVAVDIKTNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWS 75 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~--~l~~---~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~ 75 (115)
+|.+||+-++....+.... .+.+ .....++.+|-+ |. ..++.+..++...+.+...++|.|+||+.+..
T Consensus 2 ilYlHGFnSSP~shka~l~~q~~~~~~~~i~y~~p~l~h~---p~---~a~~ele~~i~~~~~~~p~ivGssLGGY~At~ 75 (191)
T COG3150 2 ILYLHGFNSSPGSHKAVLLLQFIDEDVRDIEYSTPHLPHD---PQ---QALKELEKAVQELGDESPLIVGSSLGGYYATW 75 (191)
T ss_pred eEEEecCCCCcccHHHHHHHHHHhccccceeeecCCCCCC---HH---HHHHHHHHHHHHcCCCCceEEeecchHHHHHH
Confidence 5899999887776654422 2333 223333333211 11 67788888888888788999999999999999
Q ss_pred HHHhCcccccceEEecCC
Q psy1324 76 FLDKYPELVVKSIIINVP 93 (115)
Q Consensus 76 ~~~~~~~~v~~~v~~~~~ 93 (115)
++.++ -+++++ ++|.
T Consensus 76 l~~~~--Girav~-~NPa 90 (191)
T COG3150 76 LGFLC--GIRAVV-FNPA 90 (191)
T ss_pred HHHHh--CChhhh-cCCC
Confidence 99986 344443 4443
No 162
>KOG2281|consensus
Probab=97.74 E-value=9.9e-05 Score=54.05 Aligned_cols=69 Identities=22% Similarity=0.348 Sum_probs=51.9
Q ss_pred hhh-CCceEEEecCCCCCCC--ccch-----h------hHHHHHHHHHHHhC---CCCeeEEEEchhHHHHHHHHHhCcc
Q psy1324 20 EFS-HEYWTVAVDIKTNFRT--IADR-----Y------FLVDSLKVFLDHLG---RNRCILIGRDFGGSLVWSFLDKYPE 82 (115)
Q Consensus 20 ~l~-~~~~v~~~d~~g~g~s--~~~~-----~------~~~~~~~~~~~~~~---~~~~~lvg~S~Gg~~a~~~~~~~~~ 82 (115)
.|+ .||.|+.+|-||.... .-+. . ++++-+.-+.++.+ ..++.+-|+|+||++++..+.++|+
T Consensus 671 ~LaslGy~Vv~IDnRGS~hRGlkFE~~ik~kmGqVE~eDQVeglq~Laeq~gfidmdrV~vhGWSYGGYLSlm~L~~~P~ 750 (867)
T KOG2281|consen 671 RLASLGYVVVFIDNRGSAHRGLKFESHIKKKMGQVEVEDQVEGLQMLAEQTGFIDMDRVGVHGWSYGGYLSLMGLAQYPN 750 (867)
T ss_pred hhhhcceEEEEEcCCCccccchhhHHHHhhccCeeeehhhHHHHHHHHHhcCcccchheeEeccccccHHHHHHhhcCcc
Confidence 444 4999999999987554 1111 1 66666666667665 4799999999999999999999999
Q ss_pred cccceE
Q psy1324 83 LVVKSI 88 (115)
Q Consensus 83 ~v~~~v 88 (115)
-++.+|
T Consensus 751 IfrvAI 756 (867)
T KOG2281|consen 751 IFRVAI 756 (867)
T ss_pred eeeEEe
Confidence 666554
No 163
>PF11187 DUF2974: Protein of unknown function (DUF2974); InterPro: IPR024499 This family of proteins has no known function.
Probab=97.70 E-value=0.00012 Score=47.46 Aligned_cols=37 Identities=16% Similarity=0.190 Sum_probs=31.3
Q ss_pred CCeeEEEEchhHHHHHHHHHhCc----ccccceEEecCCCC
Q psy1324 59 NRCILIGRDFGGSLVWSFLDKYP----ELVVKSIIINVPHP 95 (115)
Q Consensus 59 ~~~~lvg~S~Gg~~a~~~~~~~~----~~v~~~v~~~~~~~ 95 (115)
+++.+.|||.||.+|...+...+ ++|.++...++|..
T Consensus 84 ~~i~v~GHSkGGnLA~yaa~~~~~~~~~rI~~vy~fDgPGf 124 (224)
T PF11187_consen 84 GKIYVTGHSKGGNLAQYAAANCDDEIQDRISKVYSFDGPGF 124 (224)
T ss_pred CCEEEEEechhhHHHHHHHHHccHHHhhheeEEEEeeCCCC
Confidence 46999999999999999998853 57889998888763
No 164
>PF10340 DUF2424: Protein of unknown function (DUF2424); InterPro: IPR019436 Sterol homeostasis in eukaryotic cells relies on the reciprocal interconversion of free sterols and steryl esters. In Saccharomyces cerevisiae (Baker's yeast) sterol acetylation requires the acetyltransferase Atf2, whereas deacetylation requires Say1, a membrane-anchored deacetylase with a putative active site in the ER lumen. Lack of Say1 results in the secretion of acetylated sterols into the culture medium, indicating that the substrate specificity of Say1 determines whether acetylated sterols are secreted from the cells or whether they are deacetylated and retained. In S. cerevisiae cells lacking Say1 or Atf2 are sensitive against the plant-derived allylbenzene eugenol and both Say1 and Atf2 affect pregnenolone toxicity, indicating that lipid acetylation acts as a detoxification pathway []. Homologues of Say1 are present in the mammalian genome and can functionally substitute for Say1 in yeast demonstrating that part of this pathway has been evolutionarily conserved [].
Probab=97.67 E-value=0.00037 Score=48.29 Aligned_cols=93 Identities=20% Similarity=0.232 Sum_probs=57.9
Q ss_pred CEeecCCCCC----HhhHH---HHHHhhhCCceEEEecCCCCC-----CC-ccchhhHHHHHHHHHHHhCCCCeeEEEEc
Q psy1324 1 MLFLHGFPES----WYIWK---HQMSEFSHEYWTVAVDIKTNF-----RT-IADRYFLVDSLKVFLDHLGRNRCILIGRD 67 (115)
Q Consensus 1 vl~~hG~~~~----~~~~~---~~~~~l~~~~~v~~~d~~g~g-----~s-~~~~~~~~~~~~~~~~~~~~~~~~lvg~S 67 (115)
+|++||.+-. ..... .+.+.+. +..++..|+.-.. .. |..-.+.++....+++..+.++++++|-|
T Consensus 125 lIYlHGGGY~l~~~p~qi~~L~~i~~~l~-~~SILvLDYsLt~~~~~~~~yPtQL~qlv~~Y~~Lv~~~G~~nI~LmGDS 203 (374)
T PF10340_consen 125 LIYLHGGGYFLGTTPSQIEFLLNIYKLLP-EVSILVLDYSLTSSDEHGHKYPTQLRQLVATYDYLVESEGNKNIILMGDS 203 (374)
T ss_pred EEEEcCCeeEecCCHHHHHHHHHHHHHcC-CCeEEEEeccccccccCCCcCchHHHHHHHHHHHHHhccCCCeEEEEecC
Confidence 5889998632 22222 2223333 6688888876443 11 22111445555555556678899999999
Q ss_pred hhHHHHHHHHHhCcc-----cccceEEecCCC
Q psy1324 68 FGGSLVWSFLDKYPE-----LVVKSIIINVPH 94 (115)
Q Consensus 68 ~Gg~~a~~~~~~~~~-----~v~~~v~~~~~~ 94 (115)
.||.+++.++....+ .-+++++++|-.
T Consensus 204 AGGnL~Ls~LqyL~~~~~~~~Pk~~iLISPWv 235 (374)
T PF10340_consen 204 AGGNLALSFLQYLKKPNKLPYPKSAILISPWV 235 (374)
T ss_pred ccHHHHHHHHHHHhhcCCCCCCceeEEECCCc
Confidence 999999888776322 246788888654
No 165
>cd00519 Lipase_3 Lipase (class 3). Lipases are esterases that can hydrolyze long-chain acyl-triglycerides into di- and monoglycerides, glycerol, and free fatty acids at a water/lipid interface. A typical feature of lipases is "interfacial activation," the process of becoming active at the lipid/water interface, although several examples of lipases have been identified that do not undergo interfacial activation . The active site of a lipase contains a catalytic triad consisting of Ser - His - Asp/Glu, but unlike most serine proteases, the active site is buried inside the structure. A "lid" or "flap" covers the active site, making it inaccessible to solvent and substrates. The lid opens during the process of interfacial activation, allowing the lipid substrate access to the active site.
Probab=97.53 E-value=0.00027 Score=45.69 Aligned_cols=44 Identities=18% Similarity=0.212 Sum_probs=29.3
Q ss_pred HHHHhCCCCeeEEEEchhHHHHHHHHHhCc----ccccceEEecCCCC
Q psy1324 52 FLDHLGRNRCILIGRDFGGSLVWSFLDKYP----ELVVKSIIINVPHP 95 (115)
Q Consensus 52 ~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~----~~v~~~v~~~~~~~ 95 (115)
.+++....+++++|||+||.+|..++.... ...-.++..++|..
T Consensus 121 ~~~~~p~~~i~vtGHSLGGaiA~l~a~~l~~~~~~~~i~~~tFg~P~v 168 (229)
T cd00519 121 ALKQYPDYKIIVTGHSLGGALASLLALDLRLRGPGSDVTVYTFGQPRV 168 (229)
T ss_pred HHhhCCCceEEEEccCHHHHHHHHHHHHHHhhCCCCceEEEEeCCCCC
Confidence 333334568999999999999988877643 22334555666554
No 166
>KOG2183|consensus
Probab=97.50 E-value=0.00062 Score=47.68 Aligned_cols=70 Identities=23% Similarity=0.338 Sum_probs=53.1
Q ss_pred CceEEEecCCCCCCC-ccch----------h----hHHHHHHHHHHHhCC------CCeeEEEEchhHHHHHHHHHhCcc
Q psy1324 24 EYWTVAVDIKTNFRT-IADR----------Y----FLVDSLKVFLDHLGR------NRCILIGRDFGGSLVWSFLDKYPE 82 (115)
Q Consensus 24 ~~~v~~~d~~g~g~s-~~~~----------~----~~~~~~~~~~~~~~~------~~~~lvg~S~Gg~~a~~~~~~~~~ 82 (115)
+--++.++.|-+|.| |-+. | +-++|..++++.+.. .+++.+|-|+||+++..+-.+||.
T Consensus 111 ~AllVFaEHRyYGeS~PFG~~s~k~~~hlgyLtseQALADfA~ll~~lK~~~~a~~~pvIafGGSYGGMLaAWfRlKYPH 190 (492)
T KOG2183|consen 111 KALLVFAEHRYYGESLPFGSQSYKDARHLGYLTSEQALADFAELLTFLKRDLSAEASPVIAFGGSYGGMLAAWFRLKYPH 190 (492)
T ss_pred CceEEEeehhccccCCCCcchhccChhhhccccHHHHHHHHHHHHHHHhhccccccCcEEEecCchhhHHHHHHHhcChh
Confidence 667888899999988 3322 2 446666777766642 488999999999999999999999
Q ss_pred cccceEEecCC
Q psy1324 83 LVVKSIIINVP 93 (115)
Q Consensus 83 ~v~~~v~~~~~ 93 (115)
.+.|.+.-+.|
T Consensus 191 iv~GAlAaSAP 201 (492)
T KOG2183|consen 191 IVLGALAASAP 201 (492)
T ss_pred hhhhhhhccCc
Confidence 88887655433
No 167
>PF00135 COesterase: Carboxylesterase family The prints entry is specific to acetylcholinesterase; InterPro: IPR002018 Higher eukaryotes have many distinct esterases. Among the different types are those which act on carboxylic esters (3.1.1 from EC). Carboxyl-esterases have been classified into three categories (A, B and C) on the basis of differential patterns of inhibition by organophosphates. The sequence of a number of type-B carboxylesterases indicates [, , ] that the majority are evolutionary related. As is the case for lipases and serine proteases, the catalytic apparatus of esterases involves three residues (catalytic triad): a serine, a glutamate or aspartate and a histidine.; PDB: 3B3Q_A 1CLE_B 1GQS_A 2VJD_A 1HBJ_A 2C5G_A 1U65_A 2WG1_A 1FSS_A 3M3D_A ....
Probab=97.49 E-value=0.00032 Score=50.31 Aligned_cols=93 Identities=16% Similarity=0.171 Sum_probs=51.2
Q ss_pred CEeecCCC---CCH--hhHHHHHHhhhCCceEEEecCC----CCCCC-----ccchh---hH---HHHHHHHHHHhCC--
Q psy1324 1 MLFLHGFP---ESW--YIWKHQMSEFSHEYWTVAVDIK----TNFRT-----IADRY---FL---VDSLKVFLDHLGR-- 58 (115)
Q Consensus 1 vl~~hG~~---~~~--~~~~~~~~~l~~~~~v~~~d~~----g~g~s-----~~~~~---~~---~~~~~~~~~~~~~-- 58 (115)
+|+|||.+ ++. ..+........++.-++.+++| |+-.. +..++ ++ ++.+.+-|..+|.
T Consensus 128 ~v~ihGG~f~~G~~~~~~~~~~~~~~~~~vivVt~nYRlg~~Gfl~~~~~~~~~gN~Gl~Dq~~AL~WV~~nI~~FGGDp 207 (535)
T PF00135_consen 128 MVWIHGGGFMFGSGSFPPYDGASLAASKDVIVVTINYRLGAFGFLSLGDLDAPSGNYGLLDQRLALKWVQDNIAAFGGDP 207 (535)
T ss_dssp EEEE--STTTSSCTTSGGGHTHHHHHHHTSEEEEE----HHHHH-BSSSTTSHBSTHHHHHHHHHHHHHHHHGGGGTEEE
T ss_pred EEEeecccccCCCcccccccccccccCCCEEEEEecccccccccccccccccCchhhhhhhhHHHHHHHHhhhhhcccCC
Confidence 58999874 223 2333222222348889999887 33222 21233 33 3344444445553
Q ss_pred CCeeEEEEchhHHHHHHHHHhC--cccccceEEecCC
Q psy1324 59 NRCILIGRDFGGSLVWSFLDKY--PELVVKSIIINVP 93 (115)
Q Consensus 59 ~~~~lvg~S~Gg~~a~~~~~~~--~~~v~~~v~~~~~ 93 (115)
++|++.|||.||..+...+.-- ...++++|+.++.
T Consensus 208 ~~VTl~G~SAGa~sv~~~l~sp~~~~LF~raI~~SGs 244 (535)
T PF00135_consen 208 DNVTLFGQSAGAASVSLLLLSPSSKGLFHRAILQSGS 244 (535)
T ss_dssp EEEEEEEETHHHHHHHHHHHGGGGTTSBSEEEEES--
T ss_pred cceeeeeecccccccceeeeccccccccccccccccc
Confidence 5899999999999877766652 3579999999984
No 168
>PF02273 Acyl_transf_2: Acyl transferase; InterPro: IPR003157 LuxD proteins are bacterial acyl transferases. Together with an acyl-protein synthetase (LuxE) and reductase (LuxC), they form a multienzyme complex. This complex channels activated fatty acids into the aldehyde substrate for the luciferase-catalyzed bacterial bioluminescence reaction [, ]. ; GO: 0016746 transferase activity, transferring acyl groups, 0006631 fatty acid metabolic process; PDB: 1THT_B.
Probab=97.44 E-value=0.00081 Score=44.19 Aligned_cols=89 Identities=12% Similarity=0.107 Sum_probs=54.7
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCC-CCC--ccchh------hHHHHHHHHHHHhCCCCeeEEEEchhH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTN-FRT--IADRY------FLVDSLKVFLDHLGRNRCILIGRDFGG 70 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~-g~s--~~~~~------~~~~~~~~~~~~~~~~~~~lvg~S~Gg 70 (115)
||+.+|++...+.+..++.+++. ||.|+.+|...| |-| ....| ..+..+.++++..+.+++-++.-|+.|
T Consensus 33 iliA~Gf~rrmdh~agLA~YL~~NGFhViRyDsl~HvGlSsG~I~eftms~g~~sL~~V~dwl~~~g~~~~GLIAaSLSa 112 (294)
T PF02273_consen 33 ILIAPGFARRMDHFAGLAEYLSANGFHVIRYDSLNHVGLSSGDINEFTMSIGKASLLTVIDWLATRGIRRIGLIAASLSA 112 (294)
T ss_dssp EEEE-TT-GGGGGGHHHHHHHHTTT--EEEE---B-------------HHHHHHHHHHHHHHHHHTT---EEEEEETTHH
T ss_pred EEEecchhHHHHHHHHHHHHHhhCCeEEEeccccccccCCCCChhhcchHHhHHHHHHHHHHHHhcCCCcchhhhhhhhH
Confidence 57889999999999999999976 999999997755 555 22223 445555666667788899999999999
Q ss_pred HHHHHHHHhCcccccceEEec
Q psy1324 71 SLVWSFLDKYPELVVKSIIIN 91 (115)
Q Consensus 71 ~~a~~~~~~~~~~v~~~v~~~ 91 (115)
-+|+..+.+- .+.-+|..-
T Consensus 113 RIAy~Va~~i--~lsfLitaV 131 (294)
T PF02273_consen 113 RIAYEVAADI--NLSFLITAV 131 (294)
T ss_dssp HHHHHHTTTS----SEEEEES
T ss_pred HHHHHHhhcc--CcceEEEEe
Confidence 9999999864 355555444
No 169
>KOG4840|consensus
Probab=97.43 E-value=0.00057 Score=44.30 Aligned_cols=95 Identities=14% Similarity=0.170 Sum_probs=65.8
Q ss_pred CEeecCCCCC---HhhHHHHHHhhhC-CceEEEecCC----CCCCCccchhhHHHHHHHHHHHhCC----CCeeEEEEch
Q psy1324 1 MLFLHGFPES---WYIWKHQMSEFSH-EYWTVAVDIK----TNFRTIADRYFLVDSLKVFLDHLGR----NRCILIGRDF 68 (115)
Q Consensus 1 vl~~hG~~~~---~~~~~~~~~~l~~-~~~v~~~d~~----g~g~s~~~~~~~~~~~~~~~~~~~~----~~~~lvg~S~ 68 (115)
|||+-|.+.. ...-..+...+.+ ++..+-+.++ |+|..... +.++++...+++++. +.++++|||-
T Consensus 39 vvfiGGLgdgLl~~~y~~~L~~~lde~~wslVq~q~~Ssy~G~Gt~slk--~D~edl~~l~~Hi~~~~fSt~vVL~GhST 116 (299)
T KOG4840|consen 39 VVFIGGLGDGLLICLYTTMLNRYLDENSWSLVQPQLRSSYNGYGTFSLK--DDVEDLKCLLEHIQLCGFSTDVVLVGHST 116 (299)
T ss_pred EEEEcccCCCccccccHHHHHHHHhhccceeeeeecccccccccccccc--ccHHHHHHHHHHhhccCcccceEEEecCc
Confidence 4677777653 3344566666655 8888888765 34443111 668888888887753 4899999999
Q ss_pred hHHHHHHHHHh--CcccccceEEecCCCChh
Q psy1324 69 GGSLVWSFLDK--YPELVVKSIIINVPHPAV 97 (115)
Q Consensus 69 Gg~~a~~~~~~--~~~~v~~~v~~~~~~~~~ 97 (115)
|+.-.+.|+-. .++.+++.|+-.+-....
T Consensus 117 GcQdi~yYlTnt~~~r~iraaIlqApVSDrE 147 (299)
T KOG4840|consen 117 GCQDIMYYLTNTTKDRKIRAAILQAPVSDRE 147 (299)
T ss_pred cchHHHHHHHhccchHHHHHHHHhCccchhh
Confidence 99999998833 466788877777666544
No 170
>KOG2100|consensus
Probab=97.41 E-value=0.00065 Score=51.24 Aligned_cols=92 Identities=21% Similarity=0.271 Sum_probs=58.4
Q ss_pred CEeecCCCCCH-------hhHHHHHHhhhC-CceEEEecCCCCCCC-cc---ch---h------hHHHHHHHHHHHh--C
Q psy1324 1 MLFLHGFPESW-------YIWKHQMSEFSH-EYWTVAVDIKTNFRT-IA---DR---Y------FLVDSLKVFLDHL--G 57 (115)
Q Consensus 1 vl~~hG~~~~~-------~~~~~~~~~l~~-~~~v~~~d~~g~g~s-~~---~~---~------~~~~~~~~~~~~~--~ 57 (115)
++.+||.+++. -.|... .... ++.|+.+|.||-|.. .. .. . ++...+..+++.. +
T Consensus 529 lv~~yGGP~sq~v~~~~~~~~~~~--~~s~~g~~v~~vd~RGs~~~G~~~~~~~~~~lG~~ev~D~~~~~~~~~~~~~iD 606 (755)
T KOG2100|consen 529 LVVVYGGPGSQSVTSKFSVDWNEV--VVSSRGFAVLQVDGRGSGGYGWDFRSALPRNLGDVEVKDQIEAVKKVLKLPFID 606 (755)
T ss_pred EEEecCCCCcceeeeeEEecHHHH--hhccCCeEEEEEcCCCcCCcchhHHHHhhhhcCCcchHHHHHHHHHHHhccccc
Confidence 35667776522 223332 2333 999999999988665 11 11 1 3333333444332 4
Q ss_pred CCCeeEEEEchhHHHHHHHHHhCcccccc-eEEecCCC
Q psy1324 58 RNRCILIGRDFGGSLVWSFLDKYPELVVK-SIIINVPH 94 (115)
Q Consensus 58 ~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~-~v~~~~~~ 94 (115)
.+++.++|+|+||+++...+...|+.+.+ .+.++|-.
T Consensus 607 ~~ri~i~GwSyGGy~t~~~l~~~~~~~fkcgvavaPVt 644 (755)
T KOG2100|consen 607 RSRVAIWGWSYGGYLTLKLLESDPGDVFKCGVAVAPVT 644 (755)
T ss_pred HHHeEEeccChHHHHHHHHhhhCcCceEEEEEEeccee
Confidence 46899999999999999999999855444 47777654
No 171
>KOG3967|consensus
Probab=97.40 E-value=0.0013 Score=42.48 Aligned_cols=37 Identities=16% Similarity=0.519 Sum_probs=30.7
Q ss_pred CCCCeeEEEEchhHHHHHHHHHhCcc--cccceEEecCC
Q psy1324 57 GRNRCILIGRDFGGSLVWSFLDKYPE--LVVKSIIINVP 93 (115)
Q Consensus 57 ~~~~~~lvg~S~Gg~~a~~~~~~~~~--~v~~~v~~~~~ 93 (115)
..+.++++.||+||.....++.+.|. +|.++.+.+++
T Consensus 188 ~~~sv~vvahsyGG~~t~~l~~~f~~d~~v~aialTDs~ 226 (297)
T KOG3967|consen 188 KAESVFVVAHSYGGSLTLDLVERFPDDESVFAIALTDSA 226 (297)
T ss_pred CcceEEEEEeccCChhHHHHHHhcCCccceEEEEeeccc
Confidence 45789999999999999999999884 57777776654
No 172
>PF08840 BAAT_C: BAAT / Acyl-CoA thioester hydrolase C terminal; InterPro: IPR014940 Acyl-CoA thioesterases are a group of enzymes that catalyse the hydrolysis of acyl-CoAs to the free fatty acid and coenzyme A (CoASH), providing the potential to regulate intracellular levels of acyl-CoAs, free fatty acids and CoASH. Bile acid-CoA:amino acid N-acetyltransferase (BAAT) is involved in bile acid metabolism and may also act as an acyl-CoA thioesterase that regulates intracellular levels of free fatty acids []. This entry represents a catalytic domain is found at the C terminus of acyl-CoA thioester hydrolases and bile acid-CoA:amino acid N-acetyltransferases. ; PDB: 3K2I_B 3HLK_B.
Probab=97.35 E-value=0.00092 Score=42.99 Aligned_cols=49 Identities=14% Similarity=0.247 Sum_probs=37.0
Q ss_pred HHHHHHHHHHhC---CCCeeEEEEchhHHHHHHHHHhCcccccceEEecCCCC
Q psy1324 46 VDSLKVFLDHLG---RNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 46 ~~~~~~~~~~~~---~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~ 95 (115)
.+...++++... .+++.++|.|.||-+|+.++..+| .|+++|.++++..
T Consensus 6 fe~Ai~~L~~~p~v~~~~Igi~G~SkGaelALllAs~~~-~i~avVa~~ps~~ 57 (213)
T PF08840_consen 6 FEEAIDWLKSHPEVDPDKIGIIGISKGAELALLLASRFP-QISAVVAISPSSV 57 (213)
T ss_dssp HHHHHHHHHCSTTB--SSEEEEEETHHHHHHHHHHHHSS-SEEEEEEES--SB
T ss_pred HHHHHHHHHhCCCCCCCCEEEEEECHHHHHHHHHHhcCC-CccEEEEeCCcee
Confidence 344455555442 368999999999999999999999 6999999887753
No 173
>PLN00413 triacylglycerol lipase
Probab=97.34 E-value=0.00078 Score=47.94 Aligned_cols=52 Identities=23% Similarity=0.321 Sum_probs=37.6
Q ss_pred hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHh--------CcccccceEEecCCCC
Q psy1324 44 FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDK--------YPELVVKSIIINVPHP 95 (115)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~--------~~~~v~~~v~~~~~~~ 95 (115)
+..+.+.++++.....++++.|||+||.+|..++.. ...++.++...++|..
T Consensus 269 ~i~~~Lk~ll~~~p~~kliVTGHSLGGALAtLaA~~L~~~~~~~~~~ri~~VYTFG~PRV 328 (479)
T PLN00413 269 TILRHLKEIFDQNPTSKFILSGHSLGGALAILFTAVLIMHDEEEMLERLEGVYTFGQPRV 328 (479)
T ss_pred HHHHHHHHHHHHCCCCeEEEEecCHHHHHHHHHHHHHHhccchhhccccceEEEeCCCCC
Confidence 445666677766666789999999999999988743 1234567778887654
No 174
>KOG3101|consensus
Probab=97.33 E-value=0.00012 Score=46.94 Aligned_cols=93 Identities=16% Similarity=0.195 Sum_probs=57.6
Q ss_pred CEeecCCCCCHhhHH--HHHHhh-hC-CceEEEecCCCCCCC----cc----------------chh--------hHHHH
Q psy1324 1 MLFLHGFPESWYIWK--HQMSEF-SH-EYWTVAVDIKTNFRT----IA----------------DRY--------FLVDS 48 (115)
Q Consensus 1 vl~~hG~~~~~~~~~--~~~~~l-~~-~~~v~~~d~~g~g~s----~~----------------~~~--------~~~~~ 48 (115)
+.++.|.+.+.+.+- ...++. ++ +..|++||-...|.. ++ +.| ...+.
T Consensus 47 lf~LSGLTCT~~Nfi~Ksg~qq~As~hgl~vV~PDTSPRG~~v~g~~eswDFG~GAGFYvnAt~epw~~~yrMYdYv~kE 126 (283)
T KOG3101|consen 47 LFYLSGLTCTHENFIEKSGFQQQASKHGLAVVAPDTSPRGVEVAGDDESWDFGQGAGFYVNATQEPWAKHYRMYDYVVKE 126 (283)
T ss_pred EEEecCCcccchhhHhhhhHHHhHhhcCeEEECCCCCCCccccCCCcccccccCCceeEEecccchHhhhhhHHHHHHHH
Confidence 467889998887763 223333 33 899999984433322 00 001 22333
Q ss_pred HHHHHHH----hCCCCeeEEEEchhHHHHHHHHHhCcccccceEEecCC
Q psy1324 49 LKVFLDH----LGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVP 93 (115)
Q Consensus 49 ~~~~~~~----~~~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~ 93 (115)
+.+.++. ++..++.+.||||||.=|+..+.+.|.+.+.+-...|.
T Consensus 127 Lp~~l~~~~~pld~~k~~IfGHSMGGhGAl~~~Lkn~~kykSvSAFAPI 175 (283)
T KOG3101|consen 127 LPQLLNSANVPLDPLKVGIFGHSMGGHGALTIYLKNPSKYKSVSAFAPI 175 (283)
T ss_pred HHHHhccccccccchhcceeccccCCCceEEEEEcCcccccceeccccc
Confidence 3444432 12347899999999999999989998877766655544
No 175
>COG2819 Predicted hydrolase of the alpha/beta superfamily [General function prediction only]
Probab=97.33 E-value=0.00055 Score=45.25 Aligned_cols=47 Identities=23% Similarity=0.271 Sum_probs=39.8
Q ss_pred CCCeeEEEEchhHHHHHHHHHhCcccccceEEecCCCChhHHHHHHh
Q psy1324 58 RNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHPAVFKQELKK 104 (115)
Q Consensus 58 ~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~ 104 (115)
.++..++|||+||.+++..+..+|+.+....+++|.........+..
T Consensus 136 ~~~~~i~GhSlGGLfvl~aLL~~p~~F~~y~~~SPSlWw~n~~~l~~ 182 (264)
T COG2819 136 SERTAIIGHSLGGLFVLFALLTYPDCFGRYGLISPSLWWHNEAILRE 182 (264)
T ss_pred cccceeeeecchhHHHHHHHhcCcchhceeeeecchhhhCCHHHhcc
Confidence 45789999999999999999999999999999998876655555443
No 176
>PF06259 Abhydrolase_8: Alpha/beta hydrolase; InterPro: IPR010427 This is a family of uncharacterised proteins found in Actinobacteria. Computational analysis suggests that they may belong to the alpha-beta hydrolase family of enzymes, as they are predicted to form the core secondary structures and catalytic machinery common to these proteins []. Genomic context suggests that they may function as lipases, controlling the concentration of their putative phospholipid substrates.
Probab=97.30 E-value=0.0013 Score=41.22 Aligned_cols=53 Identities=19% Similarity=0.226 Sum_probs=40.8
Q ss_pred hHHHHHHHHHHHhC-----CCCeeEEEEchhHHHHHHHHHhCcccccceEEecCCCCh
Q psy1324 44 FLVDSLKVFLDHLG-----RNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHPA 96 (115)
Q Consensus 44 ~~~~~~~~~~~~~~-----~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~~ 96 (115)
.-...+..+++.+. ..++.++|||+|+.++-..+.+.+..++.++++++|-..
T Consensus 89 ~ga~~L~~f~~gl~a~~~~~~~~tv~GHSYGS~v~G~A~~~~~~~vddvv~~GSPG~g 146 (177)
T PF06259_consen 89 AGAPRLARFLDGLRATHGPDAHLTVVGHSYGSTVVGLAAQQGGLRVDDVVLVGSPGMG 146 (177)
T ss_pred HHHHHHHHHHHHhhhhcCCCCCEEEEEecchhHHHHHHhhhCCCCcccEEEECCCCCC
Confidence 44555555555542 347899999999999999988877789999999987543
No 177
>PLN02162 triacylglycerol lipase
Probab=97.26 E-value=0.001 Score=47.31 Aligned_cols=49 Identities=20% Similarity=0.192 Sum_probs=32.3
Q ss_pred HHHHHHHhCCCCeeEEEEchhHHHHHHHHHh---C-----cccccceEEecCCCChh
Q psy1324 49 LKVFLDHLGRNRCILIGRDFGGSLVWSFLDK---Y-----PELVVKSIIINVPHPAV 97 (115)
Q Consensus 49 ~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~---~-----~~~v~~~v~~~~~~~~~ 97 (115)
+.+.+++....+++++|||+||.+|..++.. + .+++.++...+.|....
T Consensus 268 L~~lL~k~p~~kliVTGHSLGGALAtLaAa~L~~~~~~~l~~~~~~vYTFGqPRVGn 324 (475)
T PLN02162 268 LRDKLARNKNLKYILTGHSLGGALAALFPAILAIHGEDELLDKLEGIYTFGQPRVGD 324 (475)
T ss_pred HHHHHHhCCCceEEEEecChHHHHHHHHHHHHHHccccccccccceEEEeCCCCccC
Confidence 3344444445689999999999999887542 1 12355677887775433
No 178
>PF05277 DUF726: Protein of unknown function (DUF726); InterPro: IPR007941 This family consists of several uncharacterised eukaryotic proteins.
Probab=97.26 E-value=0.0013 Score=45.21 Aligned_cols=44 Identities=20% Similarity=0.451 Sum_probs=35.6
Q ss_pred CCCCeeEEEEchhHHHHHHHHHhCccc-----ccceEEecCCCChhHHH
Q psy1324 57 GRNRCILIGRDFGGSLVWSFLDKYPEL-----VVKSIIINVPHPAVFKQ 100 (115)
Q Consensus 57 ~~~~~~lvg~S~Gg~~a~~~~~~~~~~-----v~~~v~~~~~~~~~~~~ 100 (115)
+.+|+.++|||+|+-+....+....++ |+.++++++|.+.....
T Consensus 218 G~RpVtLvG~SLGarvI~~cL~~L~~~~~~~lVe~VvL~Gapv~~~~~~ 266 (345)
T PF05277_consen 218 GERPVTLVGHSLGARVIYYCLLELAERKAFGLVENVVLMGAPVPSDPEE 266 (345)
T ss_pred CCCceEEEeecccHHHHHHHHHHHHhccccCeEeeEEEecCCCCCCHHH
Confidence 567899999999999988888776554 89999999887665443
No 179
>COG2936 Predicted acyl esterases [General function prediction only]
Probab=97.24 E-value=0.0011 Score=48.21 Aligned_cols=74 Identities=11% Similarity=-0.015 Sum_probs=56.5
Q ss_pred hCCceEEEecCCCCCCC--ccchh-----hHHHHHHHHHHHh--CCCCeeEEEEchhHHHHHHHHHhCcccccceEEecC
Q psy1324 22 SHEYWTVAVDIKTNFRT--IADRY-----FLVDSLKVFLDHL--GRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINV 92 (115)
Q Consensus 22 ~~~~~v~~~d~~g~g~s--~~~~~-----~~~~~~~~~~~~~--~~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~ 92 (115)
+.||.++..|.||.+.| ..+.+ +...++.+.+.+. ...+|..+|.|++|...+.+|+..|.-+++++...+
T Consensus 78 a~GYavV~qDvRG~~~SeG~~~~~~~~E~~Dg~D~I~Wia~QpWsNG~Vgm~G~SY~g~tq~~~Aa~~pPaLkai~p~~~ 157 (563)
T COG2936 78 AQGYAVVNQDVRGRGGSEGVFDPESSREAEDGYDTIEWLAKQPWSNGNVGMLGLSYLGFTQLAAAALQPPALKAIAPTEG 157 (563)
T ss_pred cCceEEEEecccccccCCcccceeccccccchhHHHHHHHhCCccCCeeeeecccHHHHHHHHHHhcCCchheeeccccc
Confidence 45999999999999999 11111 3344555555554 347999999999999999999999988999887776
Q ss_pred CCC
Q psy1324 93 PHP 95 (115)
Q Consensus 93 ~~~ 95 (115)
...
T Consensus 158 ~~D 160 (563)
T COG2936 158 LVD 160 (563)
T ss_pred ccc
Confidence 654
No 180
>PF03583 LIP: Secretory lipase ; InterPro: IPR005152 This entry represents a family of secreted lipases. Family members include the LIP lipases from Candida albicans, which are expressed and secreted during the infection cycle of these pathogens [].; GO: 0004806 triglyceride lipase activity, 0016042 lipid catabolic process
Probab=97.23 E-value=0.003 Score=42.53 Aligned_cols=76 Identities=22% Similarity=0.238 Sum_probs=47.8
Q ss_pred HHHhhhCCceEEEecCCCCCCC-ccch---hhHHHHHHHHHHHh---C---CCCeeEEEEchhHHHHHHHHHhC----cc
Q psy1324 17 QMSEFSHEYWTVAVDIKTNFRT-IADR---YFLVDSLKVFLDHL---G---RNRCILIGRDFGGSLVWSFLDKY----PE 82 (115)
Q Consensus 17 ~~~~l~~~~~v~~~d~~g~g~s-~~~~---~~~~~~~~~~~~~~---~---~~~~~lvg~S~Gg~~a~~~~~~~----~~ 82 (115)
+...|.+||.|+++|+.|.|.. .... +..++.+.+..+.. + ..++.++|||-||.-+...+... ||
T Consensus 19 l~~~L~~GyaVv~pDY~Glg~~y~~~~~~a~avLD~vRAA~~~~~~~gl~~~~~v~l~GySqGG~Aa~~AA~l~~~YApe 98 (290)
T PF03583_consen 19 LAAWLARGYAVVAPDYEGLGTPYLNGRSEAYAVLDAVRAARNLPPKLGLSPSSRVALWGYSQGGQAALWAAELAPSYAPE 98 (290)
T ss_pred HHHHHHCCCEEEecCCCCCCCcccCcHhHHHHHHHHHHHHHhcccccCCCCCCCEEEEeeCccHHHHHHHHHHhHHhCcc
Confidence 3445677999999999999876 1111 24444444444322 2 25899999999999876665442 44
Q ss_pred c---ccceEEecC
Q psy1324 83 L---VVKSIIINV 92 (115)
Q Consensus 83 ~---v~~~v~~~~ 92 (115)
. +.+.+..++
T Consensus 99 L~~~l~Gaa~gg~ 111 (290)
T PF03583_consen 99 LNRDLVGAAAGGP 111 (290)
T ss_pred cccceeEEeccCC
Confidence 3 555554443
No 181
>KOG3043|consensus
Probab=97.20 E-value=0.00078 Score=43.53 Aligned_cols=80 Identities=13% Similarity=0.167 Sum_probs=51.9
Q ss_pred HHHHHHhhhC-CceEEEecCC-CCCCCccch------h----------hHHHHHHHHHHHhC-CCCeeEEEEchhHHHHH
Q psy1324 14 WKHQMSEFSH-EYWTVAVDIK-TNFRTIADR------Y----------FLVDSLKVFLDHLG-RNRCILIGRDFGGSLVW 74 (115)
Q Consensus 14 ~~~~~~~l~~-~~~v~~~d~~-g~g~s~~~~------~----------~~~~~~~~~~~~~~-~~~~~lvg~S~Gg~~a~ 74 (115)
-+..++.++. ||.++.||+. |--+++..+ | ..+..+.+.++..+ .+++-++|+||||-++.
T Consensus 56 ~r~~Adk~A~~Gy~v~vPD~~~Gdp~~~~~~~~~~~~w~~~~~~~~~~~~i~~v~k~lk~~g~~kkIGv~GfCwGak~vv 135 (242)
T KOG3043|consen 56 TREGADKVALNGYTVLVPDFFRGDPWSPSLQKSERPEWMKGHSPPKIWKDITAVVKWLKNHGDSKKIGVVGFCWGAKVVV 135 (242)
T ss_pred HHHHHHHHhcCCcEEEcchhhcCCCCCCCCChhhhHHHHhcCCcccchhHHHHHHHHHHHcCCcceeeEEEEeecceEEE
Confidence 5566777765 9999999954 432332211 2 33334444444444 57899999999999999
Q ss_pred HHHHhCcccccceEEecCCC
Q psy1324 75 SFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 75 ~~~~~~~~~v~~~v~~~~~~ 94 (115)
.+..+.|+ +.+++.+=+..
T Consensus 136 ~~~~~~~~-f~a~v~~hps~ 154 (242)
T KOG3043|consen 136 TLSAKDPE-FDAGVSFHPSF 154 (242)
T ss_pred Eeeccchh-heeeeEecCCc
Confidence 99999884 55555444443
No 182
>PF11144 DUF2920: Protein of unknown function (DUF2920); InterPro: IPR022605 This bacterial family of proteins has no known function.
Probab=97.11 E-value=0.0052 Score=43.07 Aligned_cols=36 Identities=25% Similarity=0.107 Sum_probs=31.2
Q ss_pred CeeEEEEchhHHHHHHHHHhCcccccceEEecCCCC
Q psy1324 60 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 60 ~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~ 95 (115)
|++.+|+|.||+++...++-.|..+++++=-++...
T Consensus 185 p~I~~G~s~G~yla~l~~k~aP~~~~~~iDns~~~~ 220 (403)
T PF11144_consen 185 PKIYIGSSHGGYLAHLCAKIAPWLFDGVIDNSSYAL 220 (403)
T ss_pred cEEEEecCcHHHHHHHHHhhCccceeEEEecCcccc
Confidence 889999999999999999999999999875555544
No 183
>PF01083 Cutinase: Cutinase; InterPro: IPR000675 Aerial plant organs are protected by a cuticle composed of an insoluble polymeric structural compound, cutin, which is a polyester composed of hydroxy and hydroxyepoxy fatty acids []. Plant pathogenic fungi produce extracellular degradative enzymes [] that play an important role in pathogenesis. They include cutinase, which hydrolyses cutin, facilitating fungus penetration through the cuticle. Inhibition of the enzyme can prevent fungal infection through intact cuticles. Cutin monomers released from the cuticle by small amounts of cutinase on fungal spore surfaces can greatly increase the amount of cutinase secreted by the spore, the mechanism for which process is as yet unknown [, ]. Cutinase is a serine esterase containing the classical Ser, His, Asp triad of serine hydrolases []. The protein belongs to the alpha-beta class, with a central beta-sheet of 5 parallel strands covered by 5 helices on either side of the sheet. The active site cleft is partly covered by 2 thin bridges formed by amino acid side chains, by contrast with the hydrophobic lid possessed by other lipases []. The protein also contains 2 disulphide bridges, which are essential for activity, their cleavage resulting in complete loss of enzymatic activity []. Two cutinase-like proteins (MtCY39.35 and MtCY339.08c) have been found in the genome of the bacteria Mycobacterium tuberculosis.; GO: 0016787 hydrolase activity, 0008152 metabolic process; PDB: 1XZK_A 1XZA_A 1CUD_C 1XZI_A 1XZH_A 1CUF_A 1FFD_A 2CUT_A 1FFA_A 1CUA_A ....
Probab=97.11 E-value=0.0016 Score=40.81 Aligned_cols=53 Identities=15% Similarity=0.252 Sum_probs=40.3
Q ss_pred hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHh--C----cccccceEEecCCCCh
Q psy1324 44 FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDK--Y----PELVVKSIIINVPHPA 96 (115)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~--~----~~~v~~~v~~~~~~~~ 96 (115)
...+.+.+...+-...+++++|+|.|+.++..++.. . .++|.++++++-|...
T Consensus 66 ~~~~~i~~~~~~CP~~kivl~GYSQGA~V~~~~~~~~~l~~~~~~~I~avvlfGdP~~~ 124 (179)
T PF01083_consen 66 NLVRLIEEYAARCPNTKIVLAGYSQGAMVVGDALSGDGLPPDVADRIAAVVLFGDPRRG 124 (179)
T ss_dssp HHHHHHHHHHHHSTTSEEEEEEETHHHHHHHHHHHHTTSSHHHHHHEEEEEEES-TTTB
T ss_pred HHHHHHHHHHHhCCCCCEEEEecccccHHHHHHHHhccCChhhhhhEEEEEEecCCccc
Confidence 555555555556566799999999999999999888 2 3679999999977653
No 184
>PF07082 DUF1350: Protein of unknown function (DUF1350); InterPro: IPR010765 This family consists of several hypothetical proteins from both cyanobacteria and plants. Members of this family are typically around 250 residues in length. The function of this family is unknown but the species distribution indicates that the family may be involved in photosynthesis.
Probab=97.09 E-value=0.0083 Score=39.48 Aligned_cols=84 Identities=12% Similarity=0.108 Sum_probs=51.4
Q ss_pred HhhHHHHHHhhhC-CceEEEecCCCCCCC--ccch--h-hHHHHHHHHHHHhCC----CCeeEEEEchhHHHHHHHHHhC
Q psy1324 11 WYIWKHQMSEFSH-EYWTVAVDIKTNFRT--IADR--Y-FLVDSLKVFLDHLGR----NRCILIGRDFGGSLVWSFLDKY 80 (115)
Q Consensus 11 ~~~~~~~~~~l~~-~~~v~~~d~~g~g~s--~~~~--~-~~~~~~~~~~~~~~~----~~~~lvg~S~Gg~~a~~~~~~~ 80 (115)
.-.|+.+.+.|.+ ||.|++..+.- +.. .... + .+-..+..+.++.+. -+++-+|||+|+-+-.-+...+
T Consensus 33 ~itYr~lLe~La~~Gy~ViAtPy~~-tfDH~~~A~~~~~~f~~~~~~L~~~~~~~~~~lP~~~vGHSlGcklhlLi~s~~ 111 (250)
T PF07082_consen 33 QITYRYLLERLADRGYAVIATPYVV-TFDHQAIAREVWERFERCLRALQKRGGLDPAYLPVYGVGHSLGCKLHLLIGSLF 111 (250)
T ss_pred HHHHHHHHHHHHhCCcEEEEEecCC-CCcHHHHHHHHHHHHHHHHHHHHHhcCCCcccCCeeeeecccchHHHHHHhhhc
Confidence 3458888998876 99999976532 222 1111 1 111122222222221 2667799999999988888777
Q ss_pred cccccceEEecCCCC
Q psy1324 81 PELVVKSIIINVPHP 95 (115)
Q Consensus 81 ~~~v~~~v~~~~~~~ 95 (115)
+...++-++++....
T Consensus 112 ~~~r~gniliSFNN~ 126 (250)
T PF07082_consen 112 DVERAGNILISFNNF 126 (250)
T ss_pred cCcccceEEEecCCh
Confidence 666677788876553
No 185
>COG3946 VirJ Type IV secretory pathway, VirJ component [Intracellular trafficking and secretion]
Probab=97.06 E-value=0.0032 Score=44.11 Aligned_cols=78 Identities=21% Similarity=0.260 Sum_probs=56.7
Q ss_pred EeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCCCCC---ccchhhHHHHHHHHHHH----hCCCCeeEEEEchhHHHH
Q psy1324 2 LFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTNFRT---IADRYFLVDSLKVFLDH----LGRNRCILIGRDFGGSLV 73 (115)
Q Consensus 2 l~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s---~~~~~~~~~~~~~~~~~----~~~~~~~lvg~S~Gg~~a 73 (115)
||+.|=++-.+.=+++.+.|.+ ++.|+-+|-.-+.++ |+ +.++++..+++. .+.+++.++|+|+|+=+.
T Consensus 264 v~~SGDGGWr~lDk~v~~~l~~~gvpVvGvdsLRYfW~~rtPe---~~a~Dl~r~i~~y~~~w~~~~~~liGySfGADvl 340 (456)
T COG3946 264 VFYSGDGGWRDLDKEVAEALQKQGVPVVGVDSLRYFWSERTPE---QIAADLSRLIRFYARRWGAKRVLLIGYSFGADVL 340 (456)
T ss_pred EEEecCCchhhhhHHHHHHHHHCCCceeeeehhhhhhccCCHH---HHHHHHHHHHHHHHHhhCcceEEEEeecccchhh
Confidence 5667777666666777778865 999999996666666 33 455666655554 466899999999999877
Q ss_pred HHHHHhCcc
Q psy1324 74 WSFLDKYPE 82 (115)
Q Consensus 74 ~~~~~~~~~ 82 (115)
-....+.|.
T Consensus 341 P~~~n~L~~ 349 (456)
T COG3946 341 PFAYNRLPP 349 (456)
T ss_pred HHHHHhCCH
Confidence 766666653
No 186
>PF04301 DUF452: Protein of unknown function (DUF452); InterPro: IPR007398 This is a family of uncharacterised proteins.
Probab=97.02 E-value=0.0021 Score=41.38 Aligned_cols=76 Identities=20% Similarity=0.252 Sum_probs=50.5
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceE-EEecCCCCCCCccchhhHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHh
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWT-VAVDIKTNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDK 79 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v-~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~ 79 (115)
+|+.-|++.+...+.++. +.+++.+ ++.|++..... . +--+.+.+.++++|||-..|..+...
T Consensus 14 ilfF~GWg~d~~~f~hL~--~~~~~D~l~~yDYr~l~~d----------~----~~~~y~~i~lvAWSmGVw~A~~~l~~ 77 (213)
T PF04301_consen 14 ILFFAGWGMDPSPFSHLI--LPENYDVLICYDYRDLDFD----------F----DLSGYREIYLVAWSMGVWAANRVLQG 77 (213)
T ss_pred EEEEecCCCChHHhhhcc--CCCCccEEEEecCcccccc----------c----ccccCceEEEEEEeHHHHHHHHHhcc
Confidence 578899999999887763 2335554 44577655211 1 11246899999999999999888765
Q ss_pred CcccccceEEecCCC
Q psy1324 80 YPELVVKSIIINVPH 94 (115)
Q Consensus 80 ~~~~v~~~v~~~~~~ 94 (115)
.| +...+.+++.+
T Consensus 78 ~~--~~~aiAINGT~ 90 (213)
T PF04301_consen 78 IP--FKRAIAINGTP 90 (213)
T ss_pred CC--cceeEEEECCC
Confidence 43 45555555443
No 187
>COG2272 PnbA Carboxylesterase type B [Lipid metabolism]
Probab=97.00 E-value=0.0016 Score=46.44 Aligned_cols=93 Identities=16% Similarity=0.246 Sum_probs=58.1
Q ss_pred CEeecCCC---CCHhh--HHHHHHhhh-C-CceEEEecCC----CC------CCC--ccchh------hHHHHHHHHHHH
Q psy1324 1 MLFLHGFP---ESWYI--WKHQMSEFS-H-EYWTVAVDIK----TN------FRT--IADRY------FLVDSLKVFLDH 55 (115)
Q Consensus 1 vl~~hG~~---~~~~~--~~~~~~~l~-~-~~~v~~~d~~----g~------g~s--~~~~~------~~~~~~~~~~~~ 55 (115)
||+|||.+ ++... |+. ..|+ + ++-++.+++| |+ +.. ..+++ --++.+.+-|++
T Consensus 97 mV~IHGG~y~~Gs~s~~~ydg--s~La~~g~vVvVSvNYRLG~lGfL~~~~~~~~~~~~~n~Gl~DqilALkWV~~NIe~ 174 (491)
T COG2272 97 MVYIHGGGYIMGSGSEPLYDG--SALAARGDVVVVSVNYRLGALGFLDLSSLDTEDAFASNLGLLDQILALKWVRDNIEA 174 (491)
T ss_pred EEEEeccccccCCCcccccCh--HHHHhcCCEEEEEeCcccccceeeehhhccccccccccccHHHHHHHHHHHHHHHHH
Confidence 68999874 33332 332 2343 3 4788888776 22 111 00111 334555666677
Q ss_pred hCC--CCeeEEEEchhHHHHHHHHHhC--cccccceEEecCCCC
Q psy1324 56 LGR--NRCILIGRDFGGSLVWSFLDKY--PELVVKSIIINVPHP 95 (115)
Q Consensus 56 ~~~--~~~~lvg~S~Gg~~a~~~~~~~--~~~v~~~v~~~~~~~ 95 (115)
+|. ++|.|.|+|.|++.++.+++-- ...++++|+.++...
T Consensus 175 FGGDp~NVTl~GeSAGa~si~~Lla~P~AkGLF~rAi~~Sg~~~ 218 (491)
T COG2272 175 FGGDPQNVTLFGESAGAASILTLLAVPSAKGLFHRAIALSGAAS 218 (491)
T ss_pred hCCCccceEEeeccchHHHHHHhhcCccchHHHHHHHHhCCCCC
Confidence 764 5899999999999888887662 246888888887764
No 188
>PLN02408 phospholipase A1
Probab=96.92 E-value=0.0023 Score=44.40 Aligned_cols=48 Identities=17% Similarity=0.263 Sum_probs=30.5
Q ss_pred HHHHHHHHHhCCC--CeeEEEEchhHHHHHHHHHhCccc-----ccceEEecCCC
Q psy1324 47 DSLKVFLDHLGRN--RCILIGRDFGGSLVWSFLDKYPEL-----VVKSIIINVPH 94 (115)
Q Consensus 47 ~~~~~~~~~~~~~--~~~lvg~S~Gg~~a~~~~~~~~~~-----v~~~v~~~~~~ 94 (115)
+.+..+++..+.+ +++++|||+||.+|...+....+. .-.++..++|.
T Consensus 186 ~eI~~ll~~y~~~~~sI~vTGHSLGGALAtLaA~dl~~~~~~~~~V~v~tFGsPR 240 (365)
T PLN02408 186 EEIARLLQSYGDEPLSLTITGHSLGAALATLTAYDIKTTFKRAPMVTVISFGGPR 240 (365)
T ss_pred HHHHHHHHhcCCCCceEEEeccchHHHHHHHHHHHHHHhcCCCCceEEEEcCCCC
Confidence 3444445544433 589999999999998888774322 12355566554
No 189
>PLN02454 triacylglycerol lipase
Probab=96.90 E-value=0.0022 Score=45.10 Aligned_cols=31 Identities=23% Similarity=0.304 Sum_probs=22.2
Q ss_pred HHHHHHHhCCC--CeeEEEEchhHHHHHHHHHh
Q psy1324 49 LKVFLDHLGRN--RCILIGRDFGGSLVWSFLDK 79 (115)
Q Consensus 49 ~~~~~~~~~~~--~~~lvg~S~Gg~~a~~~~~~ 79 (115)
+..+++..... +++++|||+||.+|...+..
T Consensus 216 V~~l~~~Yp~~~~sI~vTGHSLGGALAtLaA~d 248 (414)
T PLN02454 216 IKELLERYKDEKLSIVLTGHSLGASLATLAAFD 248 (414)
T ss_pred HHHHHHhCCCCCceEEEEecCHHHHHHHHHHHH
Confidence 33344444334 39999999999999998865
No 190
>COG0627 Predicted esterase [General function prediction only]
Probab=96.84 E-value=0.0022 Score=43.71 Aligned_cols=38 Identities=13% Similarity=0.085 Sum_probs=33.7
Q ss_pred CeeEEEEchhHHHHHHHHHhCcccccceEEecCCCChh
Q psy1324 60 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHPAV 97 (115)
Q Consensus 60 ~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~~~ 97 (115)
+-.++||||||.=|+.++.++|++++.+..+++.....
T Consensus 153 ~~aI~G~SMGG~GAl~lA~~~pd~f~~~sS~Sg~~~~s 190 (316)
T COG0627 153 GRAIAGHSMGGYGALKLALKHPDRFKSASSFSGILSPS 190 (316)
T ss_pred CceeEEEeccchhhhhhhhhCcchhceecccccccccc
Confidence 68999999999999999999999999998888765444
No 191
>PLN02571 triacylglycerol lipase
Probab=96.77 E-value=0.0028 Score=44.59 Aligned_cols=35 Identities=9% Similarity=0.200 Sum_probs=24.6
Q ss_pred HHHHHHHHHHHhCCC--CeeEEEEchhHHHHHHHHHh
Q psy1324 45 LVDSLKVFLDHLGRN--RCILIGRDFGGSLVWSFLDK 79 (115)
Q Consensus 45 ~~~~~~~~~~~~~~~--~~~lvg~S~Gg~~a~~~~~~ 79 (115)
..+++..+++....+ +++++|||+||.+|...+..
T Consensus 210 vl~eV~~L~~~y~~e~~sI~VTGHSLGGALAtLaA~d 246 (413)
T PLN02571 210 VLNEVGRLVEKYKDEEISITICGHSLGAALATLNAVD 246 (413)
T ss_pred HHHHHHHHHHhcCcccccEEEeccchHHHHHHHHHHH
Confidence 334444445544433 68999999999999888775
No 192
>PF11339 DUF3141: Protein of unknown function (DUF3141); InterPro: IPR024501 This family of proteins appears to be predominantly expressed in Proteobacteria. Their function is unknown.
Probab=96.74 E-value=0.02 Score=41.55 Aligned_cols=36 Identities=25% Similarity=0.289 Sum_probs=32.2
Q ss_pred CCeeEEEEchhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 59 NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 59 ~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
.++.++|-|.||+.++.+++.+|+.+.-+|+-++|.
T Consensus 140 ~kp~liGnCQgGWa~~mlAA~~Pd~~gplvlaGaPl 175 (581)
T PF11339_consen 140 PKPNLIGNCQGGWAAMMLAALRPDLVGPLVLAGAPL 175 (581)
T ss_pred CCceEEeccHHHHHHHHHHhcCcCccCceeecCCCc
Confidence 489999999999999999999999998888776654
No 193
>PF00450 Peptidase_S10: Serine carboxypeptidase; InterPro: IPR001563 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S10 (clan SC). The type example is carboxypeptidase Y from Saccharomyces cerevisiae (Baker's yeast) []. All known carboxypeptidases are either metallo carboxypeptidases or serine carboxypeptidases (3.4.16.5 from EC and 3.4.16.6 from EC). The catalytic activity of the serine carboxypeptidases, like that of the trypsin family serine proteases, is provided by a charge relay system involving an aspartic acid residue hydrogen-bonded to a histidine, which is itself hydrogen-bonded to a serine []. The sequences surrounding the active site serine and histidine residues are highly conserved in all the serine carboxypeptidases.; GO: 0004185 serine-type carboxypeptidase activity, 0006508 proteolysis; PDB: 1AC5_A 1WHS_B 3SC2_B 1WHT_A 1BCR_A 1BCS_A 1GXS_A 1IVY_A 1WPX_A 1YSC_A ....
Probab=96.73 E-value=0.018 Score=40.23 Aligned_cols=97 Identities=18% Similarity=0.139 Sum_probs=58.8
Q ss_pred CEeecCCCCCHhhHHHHHHh----h---------------hCCceEEEecCC-CCCCC---ccchh-----hHHHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSE----F---------------SHEYWTVAVDIK-TNFRT---IADRY-----FLVDSLKVF 52 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~----l---------------~~~~~v~~~d~~-g~g~s---~~~~~-----~~~~~~~~~ 52 (115)
+|++.|.++.+..+-.+.+. + .+..+++.+|.| |.|.| ....+ +.++++.++
T Consensus 43 ~~wlnGGPG~SS~~g~f~e~GP~~~~~~~~~~l~~n~~sW~~~an~l~iD~PvGtGfS~~~~~~~~~~~~~~~a~~~~~f 122 (415)
T PF00450_consen 43 ILWLNGGPGCSSMWGLFGENGPFRINPDGPYTLEDNPYSWNKFANLLFIDQPVGTGFSYGNDPSDYVWNDDQAAEDLYEF 122 (415)
T ss_dssp EEEEE-TTTB-THHHHHCTTSSEEEETTSTSEEEE-TT-GGGTSEEEEE--STTSTT-EESSGGGGS-SHHHHHHHHHHH
T ss_pred EEEecCCceeccccccccccCceEEeecccccccccccccccccceEEEeecCceEEeeccccccccchhhHHHHHHHHH
Confidence 57888998888887555331 1 123568999955 88988 22212 555566555
Q ss_pred HHHh-------CCCCeeEEEEchhHHHHHHHHHh----C------cccccceEEecCCCChh
Q psy1324 53 LDHL-------GRNRCILIGRDFGGSLVWSFLDK----Y------PELVVKSIIINVPHPAV 97 (115)
Q Consensus 53 ~~~~-------~~~~~~lvg~S~Gg~~a~~~~~~----~------~~~v~~~v~~~~~~~~~ 97 (115)
++.+ ...++++.|.|+||..+..++.. . +-.++++++-++.....
T Consensus 123 l~~f~~~~p~~~~~~~yi~GESYgG~yvP~~a~~i~~~~~~~~~~~inLkGi~IGng~~dp~ 184 (415)
T PF00450_consen 123 LQQFFQKFPEYRSNPLYIAGESYGGHYVPALASYILQQNKKGDQPKINLKGIAIGNGWIDPR 184 (415)
T ss_dssp HHHHHHHSGGGTTSEEEEEEETTHHHHHHHHHHHHHHHTCC--STTSEEEEEEEESE-SBHH
T ss_pred HHHhhhhhhhccCCCEEEEccccccccchhhHHhhhhccccccccccccccceecCcccccc
Confidence 5543 33589999999999876555554 3 23488988888776543
No 194
>PLN02934 triacylglycerol lipase
Probab=96.69 E-value=0.0043 Score=44.68 Aligned_cols=52 Identities=17% Similarity=0.299 Sum_probs=36.0
Q ss_pred hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhC-----c---ccccceEEecCCCC
Q psy1324 44 FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKY-----P---ELVVKSIIINVPHP 95 (115)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~-----~---~~v~~~v~~~~~~~ 95 (115)
...+.+.+++++....++++.|||+||.+|..++... . .+...+...+.|..
T Consensus 306 ~v~~~lk~ll~~~p~~kIvVTGHSLGGALAtLaA~~L~l~~~~~~l~~~~~vYTFGsPRV 365 (515)
T PLN02934 306 AVRSKLKSLLKEHKNAKFVVTGHSLGGALAILFPTVLVLQEETEVMKRLLGVYTFGQPRI 365 (515)
T ss_pred HHHHHHHHHHHHCCCCeEEEeccccHHHHHHHHHHHHHHhcccccccCceEEEEeCCCCc
Confidence 4566677777776667999999999999998886431 1 22345666666644
No 195
>KOG4372|consensus
Probab=96.68 E-value=0.0023 Score=44.64 Aligned_cols=79 Identities=14% Similarity=0.293 Sum_probs=51.2
Q ss_pred CEeecCCCC-CHhhHHHHHHhhhCCceEEEecCCCCCCC---ccch--h---hHHHHHHHHHHHhCCCCeeEEEEchhHH
Q psy1324 1 MLFLHGFPE-SWYIWKHQMSEFSHEYWTVAVDIKTNFRT---IADR--Y---FLVDSLKVFLDHLGRNRCILIGRDFGGS 71 (115)
Q Consensus 1 vl~~hG~~~-~~~~~~~~~~~l~~~~~v~~~d~~g~g~s---~~~~--~---~~~~~~~~~~~~~~~~~~~lvg~S~Gg~ 71 (115)
|++.||+-+ +...|..-.......+.=..+..+|.-.. ..+. + ..++.+.+.+.....+++.++|||+||.
T Consensus 83 vVlthGi~~~~~~~~~~~~~~~~kk~p~~~iv~~g~~~~~~~T~~Gv~~lG~Rla~~~~e~~~~~si~kISfvghSLGGL 162 (405)
T KOG4372|consen 83 VVLTHGLHGADMEYWKEKIEQMTKKMPDKLIVVRGKMNNMCQTFDGVDVLGERLAEEVKETLYDYSIEKISFVGHSLGGL 162 (405)
T ss_pred EEeccccccccHHHHHHHHHhhhcCCCcceEeeeccccchhhccccceeeecccHHHHhhhhhccccceeeeeeeecCCe
Confidence 588999977 67778777776644222212223333222 1111 2 7777777777777788999999999999
Q ss_pred HHHHHHHh
Q psy1324 72 LVWSFLDK 79 (115)
Q Consensus 72 ~a~~~~~~ 79 (115)
++..+...
T Consensus 163 var~AIgy 170 (405)
T KOG4372|consen 163 VARYAIGY 170 (405)
T ss_pred eeeEEEEe
Confidence 87666554
No 196
>PF11288 DUF3089: Protein of unknown function (DUF3089); InterPro: IPR021440 This family of proteins has no known function.
Probab=96.60 E-value=0.0064 Score=39.03 Aligned_cols=53 Identities=19% Similarity=0.331 Sum_probs=38.1
Q ss_pred hHHHHHHHHHHHhCC-CCeeEEEEchhHHHHHHHHHhC----c--ccccceEEecCCCCh
Q psy1324 44 FLVDSLKVFLDHLGR-NRCILIGRDFGGSLVWSFLDKY----P--ELVVKSIIINVPHPA 96 (115)
Q Consensus 44 ~~~~~~~~~~~~~~~-~~~~lvg~S~Gg~~a~~~~~~~----~--~~v~~~v~~~~~~~~ 96 (115)
+..+....++++.+. ++++|+|||.|+.+..+++++. | +++-+.-+++.+.+.
T Consensus 79 DV~~AF~~yL~~~n~GRPfILaGHSQGs~~l~~LL~e~~~~~pl~~rLVAAYliG~~v~~ 138 (207)
T PF11288_consen 79 DVRAAFDYYLANYNNGRPFILAGHSQGSMHLLRLLKEEIAGDPLRKRLVAAYLIGYPVTV 138 (207)
T ss_pred HHHHHHHHHHHhcCCCCCEEEEEeChHHHHHHHHHHHHhcCchHHhhhheeeecCccccH
Confidence 667777788887754 6999999999999999999985 2 233333455555443
No 197
>KOG2182|consensus
Probab=96.58 E-value=0.019 Score=41.29 Aligned_cols=72 Identities=24% Similarity=0.347 Sum_probs=58.5
Q ss_pred CceEEEecCCCCCCC-ccch-------h----hHHHHHHHHHHHhCC-------CCeeEEEEchhHHHHHHHHHhCcccc
Q psy1324 24 EYWTVAVDIKTNFRT-IADR-------Y----FLVDSLKVFLDHLGR-------NRCILIGRDFGGSLVWSFLDKYPELV 84 (115)
Q Consensus 24 ~~~v~~~d~~g~g~s-~~~~-------~----~~~~~~~~~~~~~~~-------~~~~lvg~S~Gg~~a~~~~~~~~~~v 84 (115)
+-.|+..+.|=+|.| |... + +.+.|+.++++.+.. .+++..|-|+-|.++.-+-+++|+.+
T Consensus 118 gA~v~~lEHRFYG~S~P~~~~st~nlk~LSs~QALaDla~fI~~~n~k~n~~~~~~WitFGgSYsGsLsAW~R~~yPel~ 197 (514)
T KOG2182|consen 118 GATVFQLEHRFYGQSSPIGDLSTSNLKYLSSLQALADLAEFIKAMNAKFNFSDDSKWITFGGSYSGSLSAWFREKYPELT 197 (514)
T ss_pred CCeeEEeeeeccccCCCCCCCcccchhhhhHHHHHHHHHHHHHHHHhhcCCCCCCCeEEECCCchhHHHHHHHHhCchhh
Confidence 888999999999977 3332 2 677888888887631 27889999999999999999999999
Q ss_pred cceEEecCCCC
Q psy1324 85 VKSIIINVPHP 95 (115)
Q Consensus 85 ~~~v~~~~~~~ 95 (115)
.+.|.-++|..
T Consensus 198 ~GsvASSapv~ 208 (514)
T KOG2182|consen 198 VGSVASSAPVL 208 (514)
T ss_pred eeeccccccee
Confidence 99887776653
No 198
>PLN02310 triacylglycerol lipase
Probab=96.52 E-value=0.0094 Score=41.95 Aligned_cols=36 Identities=25% Similarity=0.400 Sum_probs=25.6
Q ss_pred CeeEEEEchhHHHHHHHHHhC----cccccceEEecCCCC
Q psy1324 60 RCILIGRDFGGSLVWSFLDKY----PELVVKSIIINVPHP 95 (115)
Q Consensus 60 ~~~lvg~S~Gg~~a~~~~~~~----~~~v~~~v~~~~~~~ 95 (115)
+++++|||+||.+|...+... +..--.++..++|-.
T Consensus 210 sI~vTGHSLGGALAtLaA~dl~~~~~~~~v~vyTFGsPRV 249 (405)
T PLN02310 210 SLTVTGHSLGGALALLNAYEAATTIPDLFVSVISFGAPRV 249 (405)
T ss_pred eEEEEcccHHHHHHHHHHHHHHHhCcCcceeEEEecCCCc
Confidence 789999999999998887653 332233666666654
No 199
>PLN02802 triacylglycerol lipase
Probab=96.31 E-value=0.0088 Score=43.10 Aligned_cols=33 Identities=12% Similarity=0.295 Sum_probs=23.1
Q ss_pred HHHHHHHHhCC--CCeeEEEEchhHHHHHHHHHhC
Q psy1324 48 SLKVFLDHLGR--NRCILIGRDFGGSLVWSFLDKY 80 (115)
Q Consensus 48 ~~~~~~~~~~~--~~~~lvg~S~Gg~~a~~~~~~~ 80 (115)
.+..+++.... .++++.|||+||.+|...+...
T Consensus 317 eV~~Ll~~Y~~e~~sI~VTGHSLGGALAtLaA~dL 351 (509)
T PLN02802 317 EVRRLMEKYKGEELSITVTGHSLGAALALLVADEL 351 (509)
T ss_pred HHHHHHHhCCCCcceEEEeccchHHHHHHHHHHHH
Confidence 33444444433 2689999999999998887764
No 200
>PLN02324 triacylglycerol lipase
Probab=96.31 E-value=0.0084 Score=42.26 Aligned_cols=34 Identities=15% Similarity=0.193 Sum_probs=24.3
Q ss_pred HHHHHHHHHHhCCC--CeeEEEEchhHHHHHHHHHh
Q psy1324 46 VDSLKVFLDHLGRN--RCILIGRDFGGSLVWSFLDK 79 (115)
Q Consensus 46 ~~~~~~~~~~~~~~--~~~lvg~S~Gg~~a~~~~~~ 79 (115)
.+.+..+++....+ +++++|||+||.+|...+..
T Consensus 200 l~eV~~L~~~Yp~e~~sItvTGHSLGGALAtLaA~d 235 (415)
T PLN02324 200 QGELKRLLELYKNEEISITFTGHSLGAVMSVLSAAD 235 (415)
T ss_pred HHHHHHHHHHCCCCCceEEEecCcHHHHHHHHHHHH
Confidence 44455555554432 68999999999999888764
No 201
>PLN03037 lipase class 3 family protein; Provisional
Probab=96.15 E-value=0.011 Score=42.79 Aligned_cols=33 Identities=15% Similarity=0.307 Sum_probs=23.2
Q ss_pred HHHHHHHHHhC----CCCeeEEEEchhHHHHHHHHHh
Q psy1324 47 DSLKVFLDHLG----RNRCILIGRDFGGSLVWSFLDK 79 (115)
Q Consensus 47 ~~~~~~~~~~~----~~~~~lvg~S~Gg~~a~~~~~~ 79 (115)
+++..+++... ..+++++|||+||.+|...+..
T Consensus 302 ~eV~rLv~~Yk~~ge~~SItVTGHSLGGALAtLaA~D 338 (525)
T PLN03037 302 EEVKRLVNFFKDRGEEVSLTITGHSLGGALALLNAYE 338 (525)
T ss_pred HHHHHHHHhccccCCcceEEEeccCHHHHHHHHHHHH
Confidence 34444454442 1368999999999999888865
No 202
>PLN02753 triacylglycerol lipase
Probab=95.88 E-value=0.016 Score=41.95 Aligned_cols=21 Identities=19% Similarity=0.227 Sum_probs=18.4
Q ss_pred CCeeEEEEchhHHHHHHHHHh
Q psy1324 59 NRCILIGRDFGGSLVWSFLDK 79 (115)
Q Consensus 59 ~~~~lvg~S~Gg~~a~~~~~~ 79 (115)
.+++++|||+||.+|...+..
T Consensus 312 ~sItVTGHSLGGALAtLaA~D 332 (531)
T PLN02753 312 LSITVTGHSLGGALAILSAYD 332 (531)
T ss_pred ceEEEEccCHHHHHHHHHHHH
Confidence 489999999999999988764
No 203
>KOG4569|consensus
Probab=95.72 E-value=0.02 Score=39.47 Aligned_cols=51 Identities=18% Similarity=0.156 Sum_probs=34.3
Q ss_pred hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhC----c--ccccceEEecCCC
Q psy1324 44 FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKY----P--ELVVKSIIINVPH 94 (115)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~----~--~~v~~~v~~~~~~ 94 (115)
.+.+.+..+++....-++++.|||+||.+|..++..- . ....+++..+.|-
T Consensus 156 ~~~~~~~~L~~~~~~~~i~vTGHSLGgAlA~laa~~i~~~~~~~~~~v~v~tFG~PR 212 (336)
T KOG4569|consen 156 GLDAELRRLIELYPNYSIWVTGHSLGGALASLAALDLVKNGLKTSSPVKVYTFGQPR 212 (336)
T ss_pred HHHHHHHHHHHhcCCcEEEEecCChHHHHHHHHHHHHHHcCCCCCCceEEEEecCCC
Confidence 4455566666666667899999999999988777663 1 1233555566553
No 204
>PLN02719 triacylglycerol lipase
Probab=95.67 E-value=0.022 Score=41.23 Aligned_cols=21 Identities=19% Similarity=0.245 Sum_probs=18.2
Q ss_pred CeeEEEEchhHHHHHHHHHhC
Q psy1324 60 RCILIGRDFGGSLVWSFLDKY 80 (115)
Q Consensus 60 ~~~lvg~S~Gg~~a~~~~~~~ 80 (115)
+++++|||+||.+|...+...
T Consensus 299 sItVTGHSLGGALAtLaA~Dl 319 (518)
T PLN02719 299 SITVTGHSLGGALAVLSAYDV 319 (518)
T ss_pred eEEEecCcHHHHHHHHHHHHH
Confidence 789999999999998877653
No 205
>PLN02213 sinapoylglucose-malate O-sinapoyltransferase/ carboxypeptidase
Probab=95.61 E-value=0.06 Score=36.80 Aligned_cols=70 Identities=13% Similarity=0.033 Sum_probs=43.8
Q ss_pred ceEEEecCC-CCCCC-cc-c-hh----hHHHHHHHHHHH----h---CCCCeeEEEEchhHHHHHHHHHhC----c----
Q psy1324 25 YWTVAVDIK-TNFRT-IA-D-RY----FLVDSLKVFLDH----L---GRNRCILIGRDFGGSLVWSFLDKY----P---- 81 (115)
Q Consensus 25 ~~v~~~d~~-g~g~s-~~-~-~~----~~~~~~~~~~~~----~---~~~~~~lvg~S~Gg~~a~~~~~~~----~---- 81 (115)
..++.+|.| |.|.| .. . .+ ..++++..+++. . ...++++.|.|+||..+-.++..- .
T Consensus 2 aNvLfiDqPvGvGfSy~~~~~~~~~d~~~a~d~~~fL~~Ff~~~p~~~~~~fyI~GESYaG~YiP~la~~I~~~n~~~~~ 81 (319)
T PLN02213 2 ANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICCE 81 (319)
T ss_pred ccEEEecCCCCCCCCCCCCCCCccccHHHHHHHHHHHHHHHHhCcccccCCeEEEeeccccchHHHHHHHHHhhcccccC
Confidence 367889988 77777 21 1 12 233455444443 2 246899999999998766666542 1
Q ss_pred --ccccceEEecCCC
Q psy1324 82 --ELVVKSIIINVPH 94 (115)
Q Consensus 82 --~~v~~~v~~~~~~ 94 (115)
-.++++++-++..
T Consensus 82 ~~inLkGi~IGNg~t 96 (319)
T PLN02213 82 PPINLQGYMLGNPVT 96 (319)
T ss_pred CceeeeEEEeCCCCC
Confidence 1477877666644
No 206
>PLN02209 serine carboxypeptidase
Probab=95.61 E-value=0.11 Score=37.17 Aligned_cols=73 Identities=14% Similarity=0.118 Sum_probs=44.6
Q ss_pred CceEEEecCC-CCCCC--ccc-hh----hHHHHHHHHHHHh----C---CCCeeEEEEchhHHHHHHHHHh----C----
Q psy1324 24 EYWTVAVDIK-TNFRT--IAD-RY----FLVDSLKVFLDHL----G---RNRCILIGRDFGGSLVWSFLDK----Y---- 80 (115)
Q Consensus 24 ~~~v~~~d~~-g~g~s--~~~-~~----~~~~~~~~~~~~~----~---~~~~~lvg~S~Gg~~a~~~~~~----~---- 80 (115)
...++.+|.| |.|.| ... .+ +.++++.++++.+ . ..++++.|.|+||..+-.++.. .
T Consensus 117 ~anllfiDqPvGtGfSy~~~~~~~~~~~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~~a~~i~~~~~~~~ 196 (437)
T PLN02209 117 TANIIFLDQPVGSGFSYSKTPIERTSDTSEVKKIHEFLQKWLIKHPQFLSNPFYVVGDSYSGMIVPALVHEISKGNYICC 196 (437)
T ss_pred cCcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhCccccCCCEEEEecCcCceehHHHHHHHHhhccccc
Confidence 3568889955 77777 211 11 3345555544432 2 3589999999999866555543 2
Q ss_pred --cccccceEEecCCCCh
Q psy1324 81 --PELVVKSIIINVPHPA 96 (115)
Q Consensus 81 --~~~v~~~v~~~~~~~~ 96 (115)
+-.++++++.++....
T Consensus 197 ~~~inl~Gi~igng~td~ 214 (437)
T PLN02209 197 NPPINLQGYVLGNPITHI 214 (437)
T ss_pred CCceeeeeEEecCcccCh
Confidence 1247788887775543
No 207
>KOG2551|consensus
Probab=95.59 E-value=0.068 Score=34.70 Aligned_cols=94 Identities=19% Similarity=0.160 Sum_probs=57.7
Q ss_pred CEeecCCCCCHhhHHHHHH----hhhCCceEEEecCCC---------CCC----C-ccc-----h------------h--
Q psy1324 1 MLFLHGFPESWYIWKHQMS----EFSHEYWTVAVDIKT---------NFR----T-IAD-----R------------Y-- 43 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~----~l~~~~~v~~~d~~g---------~g~----s-~~~-----~------------~-- 43 (115)
||++||+-++.+.+..-.. .+.+.+..+.+|-|- ... . |.+ . +
T Consensus 8 vLcLHGfrQsg~~F~~Ktg~~rK~l~k~~el~f~~aPh~~~~~~~~~~~~~~~~~a~~~~~~~~~~Wf~~n~~~~~~~~~ 87 (230)
T KOG2551|consen 8 VLCLHGFRQSGKVFSEKTGSLRKLLKKLAELVFPDAPHELPKADLPDSEREKKFDAPPDVEQNRYGWFSNNEASFTEYFG 87 (230)
T ss_pred EEEecchhhccHHHHHHhhhHHHHHHhhheEEecCCCccCCcccCCcccccccccCCcccccchhhhhcccccccccccC
Confidence 6899999999888865433 344457777776551 011 0 110 0 1
Q ss_pred --hHHHHHHHHHHHhCCCCe-eEEEEchhHHHHHHHHHh--Cc----c--cccceEEecCCCCh
Q psy1324 44 --FLVDSLKVFLDHLGRNRC-ILIGRDFGGSLVWSFLDK--YP----E--LVVKSIIINVPHPA 96 (115)
Q Consensus 44 --~~~~~~~~~~~~~~~~~~-~lvg~S~Gg~~a~~~~~~--~~----~--~v~~~v~~~~~~~~ 96 (115)
+-++.+.+.+++.| |+ -++|+|.|+.++..++.. .+ + .++=+|++++-.+.
T Consensus 88 ~eesl~yl~~~i~enG--PFDGllGFSQGA~laa~l~~~~~~~~~~~~~P~~kF~v~~SGf~~~ 149 (230)
T KOG2551|consen 88 FEESLEYLEDYIKENG--PFDGLLGFSQGAALAALLAGLGQKGLPYVKQPPFKFAVFISGFKFP 149 (230)
T ss_pred hHHHHHHHHHHHHHhC--CCccccccchhHHHHHHhhcccccCCcccCCCCeEEEEEEecCCCC
Confidence 33555566665543 44 489999999999988872 11 1 25667778776554
No 208
>KOG1202|consensus
Probab=95.56 E-value=0.093 Score=42.14 Aligned_cols=90 Identities=12% Similarity=0.133 Sum_probs=58.1
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC-ccchh-hHHHHHHHHHHHhC-CCCeeEEEEchhHHHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT-IADRY-FLVDSLKVFLDHLG-RNRCILIGRDFGGSLVWSFL 77 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s-~~~~~-~~~~~~~~~~~~~~-~~~~~lvg~S~Gg~~a~~~~ 77 (115)
++|+|-+-+.....+.+..++. +..+.... ... |.+.. ..++....-++++. ..+..++|.|+|+.++..++
T Consensus 2126 ~Ffv~pIEG~tt~l~~la~rle--~PaYglQ~---T~~vP~dSies~A~~yirqirkvQP~GPYrl~GYSyG~~l~f~ma 2200 (2376)
T KOG1202|consen 2126 LFFVHPIEGFTTALESLASRLE--IPAYGLQC---TEAVPLDSIESLAAYYIRQIRKVQPEGPYRLAGYSYGACLAFEMA 2200 (2376)
T ss_pred eEEEeccccchHHHHHHHhhcC--Ccchhhhc---cccCCcchHHHHHHHHHHHHHhcCCCCCeeeeccchhHHHHHHHH
Confidence 4678888777777777777663 11111110 111 33332 55555556666664 46899999999999999988
Q ss_pred HhCcc--cccceEEecCCCC
Q psy1324 78 DKYPE--LVVKSIIINVPHP 95 (115)
Q Consensus 78 ~~~~~--~v~~~v~~~~~~~ 95 (115)
....+ ....++++++.+.
T Consensus 2201 ~~Lqe~~~~~~lillDGspt 2220 (2376)
T KOG1202|consen 2201 SQLQEQQSPAPLILLDGSPT 2220 (2376)
T ss_pred HHHHhhcCCCcEEEecCchH
Confidence 87543 4666889988764
No 209
>PLN02761 lipase class 3 family protein
Probab=95.56 E-value=0.026 Score=40.91 Aligned_cols=20 Identities=20% Similarity=0.242 Sum_probs=17.6
Q ss_pred CeeEEEEchhHHHHHHHHHh
Q psy1324 60 RCILIGRDFGGSLVWSFLDK 79 (115)
Q Consensus 60 ~~~lvg~S~Gg~~a~~~~~~ 79 (115)
+++++|||+||.+|...+..
T Consensus 295 sItVTGHSLGGALAtLaA~D 314 (527)
T PLN02761 295 SITVTGHSLGASLALVSAYD 314 (527)
T ss_pred eEEEeccchHHHHHHHHHHH
Confidence 69999999999999888754
No 210
>COG2382 Fes Enterochelin esterase and related enzymes [Inorganic ion transport and metabolism]
Probab=95.47 E-value=0.013 Score=39.53 Aligned_cols=39 Identities=15% Similarity=0.062 Sum_probs=34.5
Q ss_pred CCeeEEEEchhHHHHHHHHHhCcccccceEEecCCCChh
Q psy1324 59 NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHPAV 97 (115)
Q Consensus 59 ~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~~~ 97 (115)
..-+|.|-|+||.+++..+..+|+++..++..++.....
T Consensus 177 ~~r~L~G~SlGG~vsL~agl~~Pe~FG~V~s~Sps~~~~ 215 (299)
T COG2382 177 DGRVLAGDSLGGLVSLYAGLRHPERFGHVLSQSGSFWWT 215 (299)
T ss_pred CCcEEeccccccHHHHHHHhcCchhhceeeccCCccccC
Confidence 356899999999999999999999999999988776544
No 211
>KOG2237|consensus
Probab=95.35 E-value=0.015 Score=43.00 Aligned_cols=88 Identities=16% Similarity=0.201 Sum_probs=55.4
Q ss_pred EeecCCCCCHhhHHHHHH--h--h-hCCceEEEecCCCCCCC-----ccchh----hHHHHHHHHHHH---hC---CCCe
Q psy1324 2 LFLHGFPESWYIWKHQMS--E--F-SHEYWTVAVDIKTNFRT-----IADRY----FLVDSLKVFLDH---LG---RNRC 61 (115)
Q Consensus 2 l~~hG~~~~~~~~~~~~~--~--l-~~~~~v~~~d~~g~g~s-----~~~~~----~~~~~~~~~~~~---~~---~~~~ 61 (115)
.++||+|+-.....+... + | ..|+.....|.||-|.- ..+.. .-.++..+..+. .+ ..+.
T Consensus 472 ~LLygYGay~isl~p~f~~srl~lld~G~Vla~a~VRGGGe~G~~WHk~G~lakKqN~f~Dfia~AeyLve~gyt~~~kL 551 (712)
T KOG2237|consen 472 LLLYGYGAYGISLDPSFRASRLSLLDRGWVLAYANVRGGGEYGEQWHKDGRLAKKQNSFDDFIACAEYLVENGYTQPSKL 551 (712)
T ss_pred eEEEEecccceeeccccccceeEEEecceEEEEEeeccCcccccchhhccchhhhcccHHHHHHHHHHHHHcCCCCccce
Confidence 478888875554433222 2 2 33777777789987644 11111 222233322232 23 3588
Q ss_pred eEEEEchhHHHHHHHHHhCcccccceEE
Q psy1324 62 ILIGRDFGGSLVWSFLDKYPELVVKSII 89 (115)
Q Consensus 62 ~lvg~S~Gg~~a~~~~~~~~~~v~~~v~ 89 (115)
.+.|.|.||.++.....+.|+++.++++
T Consensus 552 ~i~G~SaGGlLvga~iN~rPdLF~avia 579 (712)
T KOG2237|consen 552 AIEGGSAGGLLVGACINQRPDLFGAVIA 579 (712)
T ss_pred eEecccCccchhHHHhccCchHhhhhhh
Confidence 9999999999999999999998887764
No 212
>KOG2029|consensus
Probab=95.17 E-value=0.083 Score=39.05 Aligned_cols=41 Identities=27% Similarity=0.390 Sum_probs=31.3
Q ss_pred CCCeeEEEEchhHHHHHHHHHhC-----c------ccccceEEecCCCChhH
Q psy1324 58 RNRCILIGRDFGGSLVWSFLDKY-----P------ELVVKSIIINVPHPAVF 98 (115)
Q Consensus 58 ~~~~~lvg~S~Gg~~a~~~~~~~-----~------~~v~~~v~~~~~~~~~~ 98 (115)
.++++.+||||||.++-.++.+- | +..+++++++.|+...-
T Consensus 525 ~RPivwI~HSmGGLl~K~lLlda~~S~kP~ms~l~kNtrGiiFls~PHrGS~ 576 (697)
T KOG2029|consen 525 DRPIVWIGHSMGGLLAKKLLLDAYCSSKPDMSNLNKNTRGIIFLSVPHRGSR 576 (697)
T ss_pred CCceEEEecccchHHHHHHHHHHhhcCCchhhhhhccCCceEEEecCCCCCc
Confidence 35788899999999988777653 2 24888999998876544
No 213
>PLN02847 triacylglycerol lipase
Probab=95.10 E-value=0.046 Score=40.37 Aligned_cols=25 Identities=12% Similarity=0.175 Sum_probs=19.7
Q ss_pred HhCCCCeeEEEEchhHHHHHHHHHh
Q psy1324 55 HLGRNRCILIGRDFGGSLVWSFLDK 79 (115)
Q Consensus 55 ~~~~~~~~lvg~S~Gg~~a~~~~~~ 79 (115)
....-+++++|||+||.+|..++..
T Consensus 247 ~~PdYkLVITGHSLGGGVAALLAil 271 (633)
T PLN02847 247 EYPDFKIKIVGHSLGGGTAALLTYI 271 (633)
T ss_pred HCCCCeEEEeccChHHHHHHHHHHH
Confidence 3344589999999999998877665
No 214
>PLN03016 sinapoylglucose-malate O-sinapoyltransferase
Probab=94.69 E-value=0.21 Score=35.76 Aligned_cols=71 Identities=14% Similarity=0.064 Sum_probs=43.6
Q ss_pred CceEEEecCC-CCCCC--ccch-h----hHHHHHHHHHHH----h---CCCCeeEEEEchhHHHHHHHHHh----C----
Q psy1324 24 EYWTVAVDIK-TNFRT--IADR-Y----FLVDSLKVFLDH----L---GRNRCILIGRDFGGSLVWSFLDK----Y---- 80 (115)
Q Consensus 24 ~~~v~~~d~~-g~g~s--~~~~-~----~~~~~~~~~~~~----~---~~~~~~lvg~S~Gg~~a~~~~~~----~---- 80 (115)
...++.+|.| |.|.| .... . +.++++.++++. . ...++++.|.|+||..+-.++.. .
T Consensus 115 ~anllfiDqPvGtGfSy~~~~~~~~~d~~~a~~~~~fl~~f~~~~p~~~~~~~yi~GESYaG~yvP~la~~i~~~n~~~~ 194 (433)
T PLN03016 115 MANIIFLDQPVGSGFSYSKTPIDKTGDISEVKRTHEFLQKWLSRHPQYFSNPLYVVGDSYSGMIVPALVQEISQGNYICC 194 (433)
T ss_pred cCcEEEecCCCCCCccCCCCCCCccCCHHHHHHHHHHHHHHHHhChhhcCCCEEEEccCccceehHHHHHHHHhhccccc
Confidence 3668889955 78877 1111 1 233444444443 2 23689999999999866655554 2
Q ss_pred --cccccceEEecCCC
Q psy1324 81 --PELVVKSIIINVPH 94 (115)
Q Consensus 81 --~~~v~~~v~~~~~~ 94 (115)
+-.++++++-++..
T Consensus 195 ~~~inLkGi~iGNg~t 210 (433)
T PLN03016 195 EPPINLQGYMLGNPVT 210 (433)
T ss_pred CCcccceeeEecCCCc
Confidence 12477888777654
No 215
>KOG2385|consensus
Probab=94.68 E-value=0.13 Score=37.48 Aligned_cols=48 Identities=23% Similarity=0.396 Sum_probs=37.1
Q ss_pred hCCCCeeEEEEchhHHHHHHHHHhC-----cccccceEEecCCCChhHHHHHH
Q psy1324 56 LGRNRCILIGRDFGGSLVWSFLDKY-----PELVVKSIIINVPHPAVFKQELK 103 (115)
Q Consensus 56 ~~~~~~~lvg~S~Gg~~a~~~~~~~-----~~~v~~~v~~~~~~~~~~~~~~~ 103 (115)
.|.+|+.++|+|.|+-+....+... -+.|..+++++.|.+........
T Consensus 444 qG~RPVTLVGFSLGARvIf~CL~~Lakkke~~iIEnViL~GaPv~~k~~~w~k 496 (633)
T KOG2385|consen 444 QGNRPVTLVGFSLGARVIFECLLELAKKKEVGIIENVILFGAPVPTKAKLWLK 496 (633)
T ss_pred cCCCceeEeeeccchHHHHHHHHHHhhcccccceeeeeeccCCccCCHHHHHH
Confidence 4678999999999999876555432 24599999999998877766655
No 216
>COG4947 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=94.35 E-value=0.03 Score=35.17 Aligned_cols=36 Identities=22% Similarity=0.276 Sum_probs=32.5
Q ss_pred CCeeEEEEchhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 59 NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 59 ~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
.+..+-|.||||+.+.++..++|+...++|.+++-.
T Consensus 101 gs~~~sgcsmGayhA~nfvfrhP~lftkvialSGvY 136 (227)
T COG4947 101 GSTIVSGCSMGAYHAANFVFRHPHLFTKVIALSGVY 136 (227)
T ss_pred CCccccccchhhhhhhhhheeChhHhhhheeeccee
Confidence 457789999999999999999999999999998764
No 217
>COG1770 PtrB Protease II [Amino acid transport and metabolism]
Probab=93.66 E-value=0.16 Score=37.88 Aligned_cols=33 Identities=27% Similarity=0.387 Sum_probs=29.7
Q ss_pred CCeeEEEEchhHHHHHHHHHhCcccccceEEec
Q psy1324 59 NRCILIGRDFGGSLVWSFLDKYPELVVKSIIIN 91 (115)
Q Consensus 59 ~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~ 91 (115)
+.++..|-|.||+++-..+.+.|+.++++|.--
T Consensus 527 ~~i~a~GGSAGGmLmGav~N~~P~lf~~iiA~V 559 (682)
T COG1770 527 DRIVAIGGSAGGMLMGAVANMAPDLFAGIIAQV 559 (682)
T ss_pred cceEEeccCchhHHHHHHHhhChhhhhheeecC
Confidence 589999999999999999999999999987544
No 218
>KOG1516|consensus
Probab=93.42 E-value=0.27 Score=35.85 Aligned_cols=50 Identities=18% Similarity=0.129 Sum_probs=32.5
Q ss_pred HHHHHHHHHhC--CCCeeEEEEchhHHHHHHHHHh--CcccccceEEecCCCCh
Q psy1324 47 DSLKVFLDHLG--RNRCILIGRDFGGSLVWSFLDK--YPELVVKSIIINVPHPA 96 (115)
Q Consensus 47 ~~~~~~~~~~~--~~~~~lvg~S~Gg~~a~~~~~~--~~~~v~~~v~~~~~~~~ 96 (115)
+.+.+-+..++ .++++++|||.||..+..+..- ...+++++|.+++....
T Consensus 181 ~wv~~~I~~FGGdp~~vTl~G~saGa~~v~~l~~Sp~s~~LF~~aI~~SG~~~~ 234 (545)
T KOG1516|consen 181 RWVKDNIPSFGGDPKNVTLFGHSAGAASVSLLTLSPHSRGLFHKAISMSGNALS 234 (545)
T ss_pred HHHHHHHHhcCCCCCeEEEEeechhHHHHHHHhcCHhhHHHHHHHHhhcccccc
Confidence 33444444554 3689999999999987665443 12457777777766443
No 219
>COG2939 Carboxypeptidase C (cathepsin A) [Amino acid transport and metabolism]
Probab=93.32 E-value=0.59 Score=33.98 Aligned_cols=82 Identities=20% Similarity=0.188 Sum_probs=49.7
Q ss_pred CEeecCCCCCHhhHHHHHHh----hh---------------CCceEEEecCC-CCCCCc--cch----h-hHHHHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSE----FS---------------HEYWTVAVDIK-TNFRTI--ADR----Y-FLVDSLKVFL 53 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~----l~---------------~~~~v~~~d~~-g~g~s~--~~~----~-~~~~~~~~~~ 53 (115)
++++-|.+++...|-.+.+. +. +.-.++-+|.| |.|.|. .+. + ...+|+..+.
T Consensus 104 i~wlNGGPGcSS~~g~l~elGP~rI~~~~~P~~~~NP~SW~~~adLvFiDqPvGTGfS~a~~~e~~~d~~~~~~D~~~~~ 183 (498)
T COG2939 104 IFWLNGGPGCSSVTGLLGELGPKRIQSGTSPSYPDNPGSWLDFADLVFIDQPVGTGFSRALGDEKKKDFEGAGKDVYSFL 183 (498)
T ss_pred EEEecCCCChHhhhhhhhhcCCeeeeCCCCCCCCCCccccccCCceEEEecCcccCcccccccccccchhccchhHHHHH
Confidence 46788888888887666441 11 12357888954 777772 222 2 2222222222
Q ss_pred -------HHhCC--CCeeEEEEchhHHHHHHHHHhCcc
Q psy1324 54 -------DHLGR--NRCILIGRDFGGSLVWSFLDKYPE 82 (115)
Q Consensus 54 -------~~~~~--~~~~lvg~S~Gg~~a~~~~~~~~~ 82 (115)
.+... .+.+++|.|+||.-+..+|...-+
T Consensus 184 ~~f~~~fp~~~r~~~~~~L~GESYgg~yip~~A~~L~~ 221 (498)
T COG2939 184 RLFFDKFPHYARLLSPKFLAGESYGGHYIPVFAHELLE 221 (498)
T ss_pred HHHHHHHHHHhhhcCceeEeeccccchhhHHHHHHHHH
Confidence 22232 489999999999988888777443
No 220
>KOG1282|consensus
Probab=93.00 E-value=0.48 Score=34.17 Aligned_cols=70 Identities=11% Similarity=0.012 Sum_probs=40.8
Q ss_pred ceEEEecCC-CCCCC--ccc-hh-----hHHHHHH----HHHHHh---CCCCeeEEEEchhHHHHHHHHHh----Cc---
Q psy1324 25 YWTVAVDIK-TNFRT--IAD-RY-----FLVDSLK----VFLDHL---GRNRCILIGRDFGGSLVWSFLDK----YP--- 81 (115)
Q Consensus 25 ~~v~~~d~~-g~g~s--~~~-~~-----~~~~~~~----~~~~~~---~~~~~~lvg~S~Gg~~a~~~~~~----~~--- 81 (115)
..++.+|.| |.|.| ... .+ ..+++.. .++++. ..+++++.|.|++|...-.++.+ +.
T Consensus 118 aNiLfLd~PvGvGFSYs~~~~~~~~~D~~~A~d~~~FL~~wf~kfPey~~~~fyI~GESYAG~YVP~La~~I~~~N~~~~ 197 (454)
T KOG1282|consen 118 ANILFLDQPVGVGFSYSNTSSDYKTGDDGTAKDNYEFLQKWFEKFPEYKSNDFYIAGESYAGHYVPALAQEILKGNKKCC 197 (454)
T ss_pred ccEEEEecCCcCCccccCCCCcCcCCcHHHHHHHHHHHHHHHHhChhhcCCCeEEecccccceehHHHHHHHHhcccccc
Confidence 457888877 77777 111 11 3334444 334433 24699999999999665555544 32
Q ss_pred ---ccccceEEecCCC
Q psy1324 82 ---ELVVKSIIINVPH 94 (115)
Q Consensus 82 ---~~v~~~v~~~~~~ 94 (115)
-.++|+++=++..
T Consensus 198 ~~~iNLkG~~IGNg~t 213 (454)
T KOG1282|consen 198 KPNINLKGYAIGNGLT 213 (454)
T ss_pred CCcccceEEEecCccc
Confidence 2367776555444
No 221
>KOG1551|consensus
Probab=91.85 E-value=0.8 Score=30.99 Aligned_cols=72 Identities=15% Similarity=0.181 Sum_probs=47.8
Q ss_pred hCCceEEEecCCCCCCC-ccchh----hH--------HHHHHHHHHHh------CCCCeeEEEEchhHHHHHHHHHhCcc
Q psy1324 22 SHEYWTVAVDIKTNFRT-IADRY----FL--------VDSLKVFLDHL------GRNRCILIGRDFGGSLVWSFLDKYPE 82 (115)
Q Consensus 22 ~~~~~v~~~d~~g~g~s-~~~~~----~~--------~~~~~~~~~~~------~~~~~~lvg~S~Gg~~a~~~~~~~~~ 82 (115)
.++...+.++-|-+|.. |...+ +. .+.+.++...+ +..++.++|-||||.+|......++.
T Consensus 139 k~~i~tmvle~pfYgqr~p~~q~~~~Le~vtDlf~mG~A~I~E~~~lf~Ws~~~g~g~~~~~g~Smgg~~a~~vgS~~q~ 218 (371)
T KOG1551|consen 139 KREIATMVLEKPFYGQRVPEEQIIHMLEYVTDLFKMGRATIQEFVKLFTWSSADGLGNLNLVGRSMGGDIANQVGSLHQK 218 (371)
T ss_pred hhcchheeeecccccccCCHHHHHHHHHHHHHHHHhhHHHHHHHHHhcccccccCcccceeeeeecccHHHHhhcccCCC
Confidence 44677777777778877 55442 11 11223333222 46799999999999999999998888
Q ss_pred cccceEEecCC
Q psy1324 83 LVVKSIIINVP 93 (115)
Q Consensus 83 ~v~~~v~~~~~ 93 (115)
.|..+-++++.
T Consensus 219 Pva~~p~l~~~ 229 (371)
T KOG1551|consen 219 PVATAPCLNSS 229 (371)
T ss_pred Ccccccccccc
Confidence 77666555533
No 222
>PF05705 DUF829: Eukaryotic protein of unknown function (DUF829); InterPro: IPR008547 This signature identifies Transmembrane protein 53, that have no known function but are predicted to be integral membrane proteins.
Probab=91.67 E-value=2.5 Score=27.45 Aligned_cols=98 Identities=14% Similarity=0.079 Sum_probs=54.5
Q ss_pred CEeecCCCCCHh-hHHHHHHhhh-CCceEEEecCCCCCCC-ccchh-hHHHHHHHHHHHhCC---CCeeEEEEchhHHHH
Q psy1324 1 MLFLHGFPESWY-IWKHQMSEFS-HEYWTVAVDIKTNFRT-IADRY-FLVDSLKVFLDHLGR---NRCILIGRDFGGSLV 73 (115)
Q Consensus 1 vl~~hG~~~~~~-~~~~~~~~l~-~~~~v~~~d~~g~g~s-~~~~~-~~~~~~~~~~~~~~~---~~~~lvg~S~Gg~~a 73 (115)
+|++=|+.+... ......+.-. .+++++.+-.+....- +.... ..++.+.+.+..... .++.+-.+|.||...
T Consensus 2 lvvl~gW~gA~~~hl~KY~~~Y~~~g~~il~~~~~~~~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~il~H~FSnGG~~~ 81 (240)
T PF05705_consen 2 LVVLLGWMGAKPKHLAKYSDLYQDPGFDILLVTSPPADFFWPSKRLAPAADKLLELLSDSQSASPPPILFHSFSNGGSFL 81 (240)
T ss_pred EEEEEeCCCCCHHHHHHHHHHHHhcCCeEEEEeCCHHHHeeeccchHHHHHHHHHHhhhhccCCCCCEEEEEEECchHHH
Confidence 467778875443 3333333322 5899888765533222 21111 334444444444332 289999999988876
Q ss_pred HHHHHh---------Cc-ccccceEEecCCCChhH
Q psy1324 74 WSFLDK---------YP-ELVVKSIIINVPHPAVF 98 (115)
Q Consensus 74 ~~~~~~---------~~-~~v~~~v~~~~~~~~~~ 98 (115)
...+.. .+ .+++++|+=++|.....
T Consensus 82 ~~~l~~~~~~~~~~~~~~~~i~g~I~DS~P~~~~~ 116 (240)
T PF05705_consen 82 YSQLLEAYQSRKKFGKLLPRIKGIIFDSCPGIPTY 116 (240)
T ss_pred HHHHHHHHHhcccccccccccceeEEeCCCCcccc
Confidence 666552 11 23888887777754443
No 223
>PF08237 PE-PPE: PE-PPE domain; InterPro: IPR013228 The human pathogen Mycobacterium tuberculosis harbours a large number of genes that encode proteins whose N-termini contain the characteristic motifs Pro-Glu (PE) or Pro-Pro-Glu (PPE). A subgroup of the PE proteins contains polymorphic GC-rich sequences (PGRS), while a subgroup of the PPE proteins contains major polymorphic tandem repeats (MPTR). The function of most of these proteins remains unknown []. However, the PE_PGRS proteins from Mycobacterium marinum are secreted by components of the ESX-5 system that belongs to the recently defined type VII secretion systems []. It has also been reported that the PE_PGRS family of proteins contains multiple calcium-binding and glycine-rich sequence motifs GGXGXD/NXUX. This sequence repeat constitutes a calcium-binding parallel beta-roll or parallel beta-helix structure and is found in RTX toxins secreted by many Gram-negative bacteria []. This domain is found C-terminal to the PE (IPR000084 from INTERPRO) and PPE (IPR000030 from INTERPRO) domains. The secondary structure of this domain is predicted to be a mixture of alpha helices and beta strands [].
Probab=91.30 E-value=2 Score=28.07 Aligned_cols=48 Identities=15% Similarity=0.270 Sum_probs=30.8
Q ss_pred HHHHHHHHHH-h-CCCCeeEEEEchhHHHHHHHHHhCcc------cccceEEecCC
Q psy1324 46 VDSLKVFLDH-L-GRNRCILIGRDFGGSLVWSFLDKYPE------LVVKSIIINVP 93 (115)
Q Consensus 46 ~~~~~~~~~~-~-~~~~~~lvg~S~Gg~~a~~~~~~~~~------~v~~~v~~~~~ 93 (115)
++.+.+.++. . ..++++++|+|.|+.++...+.+.-+ ..-.+++++-+
T Consensus 33 ~~~L~~ai~~~~~~~~~vvV~GySQGA~Va~~~~~~l~~~~~~~~~~l~fVl~gnP 88 (225)
T PF08237_consen 33 VANLDAAIRAAIAAGGPVVVFGYSQGAVVASNVLRRLAADGDPPPDDLSFVLIGNP 88 (225)
T ss_pred HHHHHHHHHhhccCCCCEEEEEECHHHHHHHHHHHHHHhcCCCCcCceEEEEecCC
Confidence 3444444443 2 34789999999999999888777522 13345666644
No 224
>COG5153 CVT17 Putative lipase essential for disintegration of autophagic bodies inside the vacuole [Intracellular trafficking and secretion / Lipid metabolism]
Probab=91.10 E-value=0.37 Score=32.85 Aligned_cols=26 Identities=19% Similarity=0.308 Sum_probs=21.2
Q ss_pred HhCCCCeeEEEEchhHHHHHHHHHhC
Q psy1324 55 HLGRNRCILIGRDFGGSLVWSFLDKY 80 (115)
Q Consensus 55 ~~~~~~~~lvg~S~Gg~~a~~~~~~~ 80 (115)
.....++++.|||+||.+|..+..++
T Consensus 272 ~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T COG5153 272 IYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred hCCCceEEEeccccchHHHHHhcccc
Confidence 33456899999999999998887665
No 225
>KOG4540|consensus
Probab=91.10 E-value=0.37 Score=32.85 Aligned_cols=26 Identities=19% Similarity=0.308 Sum_probs=21.2
Q ss_pred HhCCCCeeEEEEchhHHHHHHHHHhC
Q psy1324 55 HLGRNRCILIGRDFGGSLVWSFLDKY 80 (115)
Q Consensus 55 ~~~~~~~~lvg~S~Gg~~a~~~~~~~ 80 (115)
.....++++.|||+||.+|..+..++
T Consensus 272 ~Ypda~iwlTGHSLGGa~AsLlG~~f 297 (425)
T KOG4540|consen 272 IYPDARIWLTGHSLGGAIASLLGIRF 297 (425)
T ss_pred hCCCceEEEeccccchHHHHHhcccc
Confidence 33456899999999999998887665
No 226
>TIGR03712 acc_sec_asp2 accessory Sec system protein Asp2. This protein is designated Asp2 because, along with SecY2, SecA2, and other proteins it is part of the accessory secretory protein system. The system is involved in the export of serine-rich glycoproteins important for virulence in a number of Gram-positive species, including Streptococcus gordonii and Staphylococcus aureus. This protein family is assigned to transport rather than glycosylation function, but the specific molecular role is unknown.
Probab=89.69 E-value=1.3 Score=32.32 Aligned_cols=61 Identities=25% Similarity=0.285 Sum_probs=41.7
Q ss_pred cCCCCCCC---ccchh--hHHHHHHHHHHHhCC--CCeeEEEEchhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 31 DIKTNFRT---IADRY--FLVDSLKVFLDHLGR--NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 31 d~~g~g~s---~~~~~--~~~~~~~~~~~~~~~--~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
|.|--|.+ -...| ...+-+.+.++.++. ..+++-|.|||.+-|+.++++. =...|.++-|.
T Consensus 322 DpRleGGaFYlGs~eyE~~I~~~I~~~L~~LgF~~~qLILSGlSMGTfgAlYYga~l---~P~AIiVgKPL 389 (511)
T TIGR03712 322 DPRLEGGAFYLGSDEYEQGIINVIQEKLDYLGFDHDQLILSGLSMGTFGALYYGAKL---SPHAIIVGKPL 389 (511)
T ss_pred ccccccceeeeCcHHHHHHHHHHHHHHHHHhCCCHHHeeeccccccchhhhhhcccC---CCceEEEcCcc
Confidence 55555555 22224 666777788888886 4799999999999999999984 22344555443
No 227
>KOG3253|consensus
Probab=89.23 E-value=0.51 Score=35.31 Aligned_cols=92 Identities=13% Similarity=0.123 Sum_probs=52.2
Q ss_pred CEeecCCC---CCHhh---HHHHHHhhhCCceEEEecCCCCCCC-ccchhhHHHHHH--------HHHHHhCCCCeeEEE
Q psy1324 1 MLFLHGFP---ESWYI---WKHQMSEFSHEYWTVAVDIKTNFRT-IADRYFLVDSLK--------VFLDHLGRNRCILIG 65 (115)
Q Consensus 1 vl~~hG~~---~~~~~---~~~~~~~l~~~~~v~~~d~~g~g~s-~~~~~~~~~~~~--------~~~~~~~~~~~~lvg 65 (115)
++++||.+ .+.+. |+.......+-..+-.+|++.--.. ... .-++.+. ++.-++...+++|+|
T Consensus 179 ~i~aps~p~ap~tSd~~~~wqs~lsl~gevvev~tfdl~n~igG~nI~--h~ae~~vSf~r~kvlei~gefpha~IiLvG 256 (784)
T KOG3253|consen 179 AIKAPSTPLAPKTSDRMWSWQSRLSLKGEVVEVPTFDLNNPIGGANIK--HAAEYSVSFDRYKVLEITGEFPHAPIILVG 256 (784)
T ss_pred EEeccCCCCCCccchHHHhHHHHHhhhceeeeeccccccCCCCCcchH--HHHHHHHHHhhhhhhhhhccCCCCceEEEe
Confidence 36778776 12222 4444444444556666666533221 111 2222222 233334557999999
Q ss_pred EchhHHHHHHHHHhCc-ccccceEEecCCC
Q psy1324 66 RDFGGSLVWSFLDKYP-ELVVKSIIINVPH 94 (115)
Q Consensus 66 ~S~Gg~~a~~~~~~~~-~~v~~~v~~~~~~ 94 (115)
.|||+.++.+...... ..|+++|.++-+.
T Consensus 257 rsmGAlVachVSpsnsdv~V~~vVCigypl 286 (784)
T KOG3253|consen 257 RSMGALVACHVSPSNSDVEVDAVVCIGYPL 286 (784)
T ss_pred cccCceeeEEeccccCCceEEEEEEecccc
Confidence 9999888887766654 2388888887554
No 228
>PRK12467 peptide synthase; Provisional
Probab=88.39 E-value=7.1 Score=35.74 Aligned_cols=91 Identities=8% Similarity=0.058 Sum_probs=60.2
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC--ccchh-hHHHHHHHHHHHhC-CCCeeEEEEchhHHHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT--IADRY-FLVDSLKVFLDHLG-RNRCILIGRDFGGSLVWSF 76 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s--~~~~~-~~~~~~~~~~~~~~-~~~~~lvg~S~Gg~~a~~~ 76 (115)
++..|...++...+.++...+..+..++.+..++.-.. +...+ .++....+.++... ..+..+.|+|+||.++..+
T Consensus 3695 l~~~h~~~r~~~~~~~l~~~l~~~~~~~~l~~~~~~~d~~~~~~~~~~~~~y~~~~~~~~~~~p~~l~g~s~g~~~a~~~ 3774 (3956)
T PRK12467 3695 LFCRHEGLGTVFDYEPLAVILEGDRHVLGLTCRHLLDDGWQDTSLQAMAVQYADYILWQQAKGPYGLLGWSLGGTLARLV 3774 (3956)
T ss_pred eeeechhhcchhhhHHHHHHhCCCCcEEEEeccccccccCCccchHHHHHHHHHHHHHhccCCCeeeeeeecchHHHHHH
Confidence 46788888877777787777777778888776654222 11112 45555555555543 4578999999999998887
Q ss_pred HHhC---cccccceEEec
Q psy1324 77 LDKY---PELVVKSIIIN 91 (115)
Q Consensus 77 ~~~~---~~~v~~~v~~~ 91 (115)
+... .+.+.-+.+++
T Consensus 3775 ~~~l~~~g~~~~~~~~~~ 3792 (3956)
T PRK12467 3775 AELLEREGESEAFLGLFD 3792 (3956)
T ss_pred HHHHHHcCCceeEEEEEe
Confidence 7763 34555555554
No 229
>PF07519 Tannase: Tannase and feruloyl esterase; InterPro: IPR011118 This family includes fungal tannase [] and feruloyl esterase [, ]. It also includes several bacterial homologues of unknown function.
Probab=87.84 E-value=1.5 Score=31.82 Aligned_cols=36 Identities=17% Similarity=0.097 Sum_probs=31.4
Q ss_pred CCeeEEEEchhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 59 NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 59 ~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
+.-+..|.|-||--++..++++|+..++++.-.|..
T Consensus 115 ~~sY~~GcS~GGRqgl~~AQryP~dfDGIlAgaPA~ 150 (474)
T PF07519_consen 115 KYSYFSGCSTGGRQGLMAAQRYPEDFDGILAGAPAI 150 (474)
T ss_pred CceEEEEeCCCcchHHHHHHhChhhcCeEEeCCchH
Confidence 467899999999999999999999999998655553
No 230
>PF10081 Abhydrolase_9: Alpha/beta-hydrolase family; InterPro: IPR012037 There are currently no experimental data for members of this group or their homologues, nor do they exhibit features indicative of any function.
Probab=84.30 E-value=2.7 Score=28.57 Aligned_cols=45 Identities=18% Similarity=0.176 Sum_probs=33.9
Q ss_pred CCeeEEEEchhHHHHHHHHHh---CcccccceEEecCCCChhHHHHHH
Q psy1324 59 NRCILIGRDFGGSLVWSFLDK---YPELVVKSIIINVPHPAVFKQELK 103 (115)
Q Consensus 59 ~~~~lvg~S~Gg~~a~~~~~~---~~~~v~~~v~~~~~~~~~~~~~~~ 103 (115)
.++++.|.|+|++-+...... .-+++.+.+..++|..+..-..+.
T Consensus 109 PkL~l~GeSLGa~g~~~af~~~~~~~~~vdGalw~GpP~~s~~w~~~t 156 (289)
T PF10081_consen 109 PKLYLYGESLGAYGGEAAFDGLDDLRDRVDGALWVGPPFFSPLWRELT 156 (289)
T ss_pred CeEEEeccCccccchhhhhccHHHhhhhcceEEEeCCCCCChhHHHhc
Confidence 589999999998876555433 346799999999998777655543
No 231
>KOG1283|consensus
Probab=84.19 E-value=2.3 Score=29.62 Aligned_cols=57 Identities=14% Similarity=0.128 Sum_probs=40.5
Q ss_pred CceEEEecCC-CCCCC-ccc-h-h-----hHHHHHHHHHHHh-------CCCCeeEEEEchhHHHHHHHHHhC
Q psy1324 24 EYWTVAVDIK-TNFRT-IAD-R-Y-----FLVDSLKVFLDHL-------GRNRCILIGRDFGGSLVWSFLDKY 80 (115)
Q Consensus 24 ~~~v~~~d~~-g~g~s-~~~-~-~-----~~~~~~~~~~~~~-------~~~~~~lvg~S~Gg~~a~~~~~~~ 80 (115)
...++.+|-| |-|.| ..+ . | +.+.++.++++.+ ...|++++-.|+||-++..++...
T Consensus 71 ~adllfvDnPVGaGfSyVdg~~~Y~~~~~qia~Dl~~llk~f~~~h~e~~t~P~~If~ESYGGKma~k~al~l 143 (414)
T KOG1283|consen 71 DADLLFVDNPVGAGFSYVDGSSAYTTNNKQIALDLVELLKGFFTNHPEFKTVPLYIFCESYGGKMAAKFALEL 143 (414)
T ss_pred hccEEEecCCCcCceeeecCcccccccHHHHHHHHHHHHHHHHhcCccccccceEEEEhhcccchhhhhhhhH
Confidence 3557778866 66777 222 2 4 5666777777654 235899999999999999888775
No 232
>smart00827 PKS_AT Acyl transferase domain in polyketide synthase (PKS) enzymes.
Probab=82.95 E-value=2.2 Score=28.55 Aligned_cols=29 Identities=10% Similarity=0.102 Sum_probs=22.4
Q ss_pred HHHHHHhCCCCeeEEEEchhHHHHHHHHH
Q psy1324 50 KVFLDHLGRNRCILIGRDFGGSLVWSFLD 78 (115)
Q Consensus 50 ~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~ 78 (115)
.+.+++.+.++-.++|||+|-+.|...+.
T Consensus 73 ~~~l~~~Gi~p~~~~GhSlGE~aA~~~ag 101 (298)
T smart00827 73 ARLWRSWGVRPDAVVGHSLGEIAAAYVAG 101 (298)
T ss_pred HHHHHHcCCcccEEEecCHHHHHHHHHhC
Confidence 35556778889999999999887766543
No 233
>cd07198 Patatin Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes PNPLA (1-9), TGL (3-5), ExoU-like, and SDP1-like subfamilies. There are some additional hypothetical proteins included in this family.
Probab=81.77 E-value=4 Score=25.19 Aligned_cols=33 Identities=15% Similarity=0.065 Sum_probs=25.3
Q ss_pred HHHHHHHhCCCCeeEEEEchhHHHHHHHHHhCc
Q psy1324 49 LKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYP 81 (115)
Q Consensus 49 ~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~ 81 (115)
+.+.+++.+...-.+.|-|+|+.++..++...+
T Consensus 16 vl~aL~e~gi~~d~v~GtSaGAi~aa~~a~g~~ 48 (172)
T cd07198 16 VAKALRERGPLIDIIAGTSAGAIVAALLASGRD 48 (172)
T ss_pred HHHHHHHcCCCCCEEEEECHHHHHHHHHHcCCC
Confidence 334444556677789999999999999998754
No 234
>cd07225 Pat_PNPLA6_PNPLA7 Patatin-like phospholipase domain containing protein 6 and protein 7. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are 60% identical to each other. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologous to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and pancreatic tissue. NRE
Probab=81.36 E-value=3.6 Score=28.17 Aligned_cols=63 Identities=6% Similarity=-0.022 Sum_probs=37.6
Q ss_pred hhHHHHHHhhhCCceEEEecCCCCCCCccchhhHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhC
Q psy1324 12 YIWKHQMSEFSHEYWTVAVDIKTNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKY 80 (115)
Q Consensus 12 ~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~ 80 (115)
.+|+.+.+.+...-.-++.+ |-|.. + -...-+.+.+++.+.+.-.++|-|+|+.++..++..+
T Consensus 2 ~d~~rl~r~l~~~~~gLvL~--GGG~R--G--~ahiGvL~aLee~gi~~d~v~GtSaGAi~ga~ya~g~ 64 (306)
T cd07225 2 SDFSRLARVLTGNSIALVLG--GGGAR--G--CAHIGVIKALEEAGIPVDMVGGTSIGAFIGALYAEER 64 (306)
T ss_pred ChHHHHHHHhcCCCEEEEEC--ChHHH--H--HHHHHHHHHHHHcCCCCCEEEEECHHHHHHHHHHcCC
Confidence 35666666665432223322 21111 0 2223345555566777778899999999999999875
No 235
>COG1505 Serine proteases of the peptidase family S9A [Amino acid transport and metabolism]
Probab=81.04 E-value=0.7 Score=34.44 Aligned_cols=90 Identities=19% Similarity=0.151 Sum_probs=56.7
Q ss_pred eecCCCCCH----hhHHHHHH-hhhCCceEEEecCCCCCCC-ccch---h-----hHHHHHHHHHHHh---CC---CCee
Q psy1324 3 FLHGFPESW----YIWKHQMS-EFSHEYWTVAVDIKTNFRT-IADR---Y-----FLVDSLKVFLDHL---GR---NRCI 62 (115)
Q Consensus 3 ~~hG~~~~~----~~~~~~~~-~l~~~~~v~~~d~~g~g~s-~~~~---~-----~~~~~~~~~~~~~---~~---~~~~ 62 (115)
++|||++-. ..|..... -|..|...+..+.||-|.- |.=+ . ...++..++.+.+ ++ +++.
T Consensus 424 ll~aYGGF~vsltP~fs~~~~~WLerGg~~v~ANIRGGGEfGp~WH~Aa~k~nrq~vfdDf~AVaedLi~rgitspe~lg 503 (648)
T COG1505 424 LLYAYGGFNISLTPRFSGSRKLWLERGGVFVLANIRGGGEFGPEWHQAGMKENKQNVFDDFIAVAEDLIKRGITSPEKLG 503 (648)
T ss_pred EEEeccccccccCCccchhhHHHHhcCCeEEEEecccCCccCHHHHHHHhhhcchhhhHHHHHHHHHHHHhCCCCHHHhh
Confidence 567776532 22333332 3466888888899987644 1100 0 3344444444444 22 5788
Q ss_pred EEEEchhHHHHHHHHHhCcccccceEEecCC
Q psy1324 63 LIGRDFGGSLVWSFLDKYPELVVKSIIINVP 93 (115)
Q Consensus 63 lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~ 93 (115)
+.|-|-||.++-..+-+.|+.+.+++ +..|
T Consensus 504 i~GgSNGGLLvg~alTQrPelfgA~v-~evP 533 (648)
T COG1505 504 IQGGSNGGLLVGAALTQRPELFGAAV-CEVP 533 (648)
T ss_pred hccCCCCceEEEeeeccChhhhCcee-eccc
Confidence 99999999999999999999887775 4433
No 236
>TIGR03131 malonate_mdcH malonate decarboxylase, epsilon subunit. Members of this protein family are the epsilon subunit of malonate decarboxylase. This subunit has malonyl-CoA/dephospho-CoA acyltransferase activity. Malonate decarboxylase may be a soluble enzyme, or linked to membrane subunits and active as a sodium pump. The epsilon subunit is closely related to the malonyl CoA-acyl carrier protein (ACP) transacylase family described by TIGR00128, but acts on an ACP subunit of malonate decarboxylase that has an unusual coenzyme A derivative as its prothetic group.
Probab=80.85 E-value=3 Score=28.03 Aligned_cols=29 Identities=14% Similarity=-0.099 Sum_probs=21.9
Q ss_pred HHHHHHHhCCCCeeEEEEchhHHHHHHHH
Q psy1324 49 LKVFLDHLGRNRCILIGRDFGGSLVWSFL 77 (115)
Q Consensus 49 ~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~ 77 (115)
+.+.++..+.++-.++|||+|=+.|...+
T Consensus 66 l~~~l~~~g~~P~~v~GhS~GE~aAa~~a 94 (295)
T TIGR03131 66 AWRALLALLPRPSAVAGYSVGEYAAAVVA 94 (295)
T ss_pred HHHHHHhcCCCCcEEeecCHHHHHHHHHh
Confidence 34555666788999999999987766654
No 237
>PF00698 Acyl_transf_1: Acyl transferase domain; InterPro: IPR014043 Enzymes like bacterial malonyl CoA-acly carrier protein transacylase (2.3.1.39 from EC) and eukaryotic fatty acid synthase (2.3.1.85 from EC) that are involved in fatty acid biosynthesis belong to this group. Also included are the polyketide synthases 6-methylsalicylic acid synthase (2.3.1 from EC), a multifunctional enzyme that involved in the biosynthesis of patulin and conidial green pigment synthase (2.3.1 from EC).; PDB: 3HHD_C 2JFD_D 2JFK_A 3G87_A 3IM9_A 2QO3_B 3IM8_A 3EZO_A 2QJ3_A 2QC3_A ....
Probab=80.74 E-value=1.5 Score=29.92 Aligned_cols=30 Identities=20% Similarity=0.221 Sum_probs=22.8
Q ss_pred HHHHHHHhCCCCeeEEEEchhHHHHHHHHH
Q psy1324 49 LKVFLDHLGRNRCILIGRDFGGSLVWSFLD 78 (115)
Q Consensus 49 ~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~ 78 (115)
+.+.++..|.++-.++|||+|=+.|+..+-
T Consensus 74 l~~~l~~~Gi~P~~v~GhSlGE~aA~~aaG 103 (318)
T PF00698_consen 74 LARLLRSWGIKPDAVIGHSLGEYAALVAAG 103 (318)
T ss_dssp HHHHHHHTTHCESEEEESTTHHHHHHHHTT
T ss_pred hhhhhcccccccceeeccchhhHHHHHHCC
Confidence 445567778889999999999877665543
No 238
>PRK10279 hypothetical protein; Provisional
Probab=79.45 E-value=4.3 Score=27.76 Aligned_cols=33 Identities=15% Similarity=0.108 Sum_probs=26.4
Q ss_pred HHHHHHHhCCCCeeEEEEchhHHHHHHHHHhCc
Q psy1324 49 LKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYP 81 (115)
Q Consensus 49 ~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~ 81 (115)
+.+.+++.+.+.-.+.|-|+|+.++..++....
T Consensus 23 VL~aL~E~gi~~d~i~GtS~GAlvga~yA~g~~ 55 (300)
T PRK10279 23 VINALKKVGIEIDIVAGCSIGSLVGAAYACDRL 55 (300)
T ss_pred HHHHHHHcCCCcCEEEEEcHHHHHHHHHHcCCh
Confidence 445556677787889999999999999987654
No 239
>PF09949 DUF2183: Uncharacterized conserved protein (DUF2183); InterPro: IPR019236 This domain, found in various bacterial and fungal proteins, has no known function.
Probab=79.43 E-value=9.2 Score=21.71 Aligned_cols=77 Identities=10% Similarity=0.183 Sum_probs=48.5
Q ss_pred hHHHHHHhhhC-CceEEEecCCCCCCCccchh------hHHHHHHHHHHHhCCCCeeEEEEchh--HHHHHHHHHhCccc
Q psy1324 13 IWKHQMSEFSH-EYWTVAVDIKTNFRTIADRY------FLVDSLKVFLDHLGRNRCILIGRDFG--GSLVWSFLDKYPEL 83 (115)
Q Consensus 13 ~~~~~~~~l~~-~~~v~~~d~~g~g~s~~~~~------~~~~~~~~~~~~~~~~~~~lvg~S~G--g~~a~~~~~~~~~~ 83 (115)
.|..+.+.+.. ++..=.+.++..+.+....+ .-...+..+++.+...+++++|=|-- --+-..++.++|++
T Consensus 12 ly~~l~~Fl~~~~~P~G~~~Lr~~~~~~~~~~~~~~~~~K~~~i~~i~~~fP~~kfiLIGDsgq~DpeiY~~ia~~~P~~ 91 (100)
T PF09949_consen 12 LYPFLRDFLRRNGFPAGPLLLRDYGPSLSGLFKSGAEEHKRDNIERILRDFPERKFILIGDSGQHDPEIYAEIARRFPGR 91 (100)
T ss_pred HHHHHHHHHHhcCCCCCceEcccCCccccccccCCchhHHHHHHHHHHHHCCCCcEEEEeeCCCcCHHHHHHHHHHCCCC
Confidence 34444444443 56555555665544411111 34567778888888889999996654 34456678889999
Q ss_pred ccceEE
Q psy1324 84 VVKSII 89 (115)
Q Consensus 84 v~~~v~ 89 (115)
|.++.+
T Consensus 92 i~ai~I 97 (100)
T PF09949_consen 92 ILAIYI 97 (100)
T ss_pred EEEEEE
Confidence 988754
No 240
>cd07207 Pat_ExoU_VipD_like ExoU and VipD-like proteins; homologus to patatin, cPLA2, and iPLA2. ExoU, a 74-kDa enzyme, is a potent virulence factor of Pseudomonas aeruginosa. One of the pathogenic mechanisms of P. aeruginosa is to induce cytotoxicity by the injection of effector proteins (e.g. ExoU) using the type III secretion (T3S) system. ExoU is homologus to patatin and also has the conserved catalytic residues of mammalian calcium-independent (iPLA2) and cytosolic (cPLA2) PLA2. In vitro, ExoU cytotoxity is blocked by the inhibitor of cytosolic and Ca2-independent phospholipase A2 (cPLA2 and iPLA2) enzymes, suggesting that phospholipase A2 inhibitors may represent a novel mode of treatment for acute P. aeruginosa infections. ExoU requires eukaryotic superoxide dismutase as a cofactor and cleaves phosphatidylcholine and phosphatidylethanolamine in vitro. VipD, a 69-kDa cytosolic protein, belongs to the members of Legionella pneumophila family and is homologus to ExoU from Pseudomona
Probab=78.84 E-value=5.1 Score=25.01 Aligned_cols=31 Identities=16% Similarity=0.094 Sum_probs=23.7
Q ss_pred HHHHHhCCCCeeEEEEchhHHHHHHHHHhCc
Q psy1324 51 VFLDHLGRNRCILIGRDFGGSLVWSFLDKYP 81 (115)
Q Consensus 51 ~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~ 81 (115)
+.+++.+...-.++|-|.||.++..++...+
T Consensus 19 ~~L~e~~~~~d~i~GtSaGai~aa~~a~g~~ 49 (194)
T cd07207 19 KALEEAGILKKRVAGTSAGAITAALLALGYS 49 (194)
T ss_pred HHHHHcCCCcceEEEECHHHHHHHHHHcCCC
Confidence 3344456666788999999999999998653
No 241
>COG1448 TyrB Aspartate/tyrosine/aromatic aminotransferase [Amino acid transport and metabolism]
Probab=78.60 E-value=21 Score=25.46 Aligned_cols=82 Identities=16% Similarity=0.146 Sum_probs=50.7
Q ss_pred CEeecCCCC-------CHhhHHHHHHhhhCCceEEEecCC--CCCCCccchhhHHHHHHHHHHHhCCCCeeEEEEchhHH
Q psy1324 1 MLFLHGFPE-------SWYIWKHQMSEFSHEYWTVAVDIK--TNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGS 71 (115)
Q Consensus 1 vl~~hG~~~-------~~~~~~~~~~~l~~~~~v~~~d~~--g~g~s~~~~~~~~~~~~~~~~~~~~~~~~lvg~S~Gg~ 71 (115)
||++||... +.+.|+.+++.+++.--+-.+|.. |++.. .+ +.+..+..++... +-.++..|+.-.
T Consensus 174 vvLLH~CcHNPTG~D~t~~qW~~l~~~~~~r~lip~~D~AYQGF~~G-le--eDa~~lR~~a~~~---~~~lva~S~SKn 247 (396)
T COG1448 174 VVLLHGCCHNPTGIDPTEEQWQELADLIKERGLIPFFDIAYQGFADG-LE--EDAYALRLFAEVG---PELLVASSFSKN 247 (396)
T ss_pred EEEEecCCCCCCCCCCCHHHHHHHHHHHHHcCCeeeeehhhhhhccc-hH--HHHHHHHHHHHhC---CcEEEEehhhhh
Confidence 688998854 466799999888876556666655 44333 11 3444444444432 227777777655
Q ss_pred HHHHHHHhCcccccceEEecCC
Q psy1324 72 LVWSFLDKYPELVVKSIIINVP 93 (115)
Q Consensus 72 ~a~~~~~~~~~~v~~~v~~~~~ 93 (115)
++ .|.||+.++.+++..
T Consensus 248 fg-----LYgERVGa~~vva~~ 264 (396)
T COG1448 248 FG-----LYGERVGALSVVAED 264 (396)
T ss_pred hh-----hhhhccceeEEEeCC
Confidence 43 356788888777544
No 242
>TIGR00128 fabD malonyl CoA-acyl carrier protein transacylase. The seed alignment for this family of proteins contains a single member each from a number of bacterial species but also an additional pair of closely related, uncharacterized proteins from B. subtilis, one of which has a long C-terminal extension.
Probab=77.98 E-value=4.2 Score=27.10 Aligned_cols=28 Identities=14% Similarity=0.102 Sum_probs=20.8
Q ss_pred HHHHHhC-CCCeeEEEEchhHHHHHHHHH
Q psy1324 51 VFLDHLG-RNRCILIGRDFGGSLVWSFLD 78 (115)
Q Consensus 51 ~~~~~~~-~~~~~lvg~S~Gg~~a~~~~~ 78 (115)
+.+++.+ .++-.++|||+|=+.|...+.
T Consensus 74 ~~l~~~g~i~p~~v~GhS~GE~aAa~~aG 102 (290)
T TIGR00128 74 LKLKEQGGLKPDFAAGHSLGEYSALVAAG 102 (290)
T ss_pred HHHHHcCCCCCCEEeecCHHHHHHHHHhC
Confidence 4445556 888999999999887666553
No 243
>COG1752 RssA Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=77.97 E-value=4.5 Score=27.53 Aligned_cols=34 Identities=12% Similarity=0.125 Sum_probs=27.9
Q ss_pred HHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhCc
Q psy1324 48 SLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYP 81 (115)
Q Consensus 48 ~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~ 81 (115)
-+.+.+++.+.+.-.+.|-|+|+.++.-++..+.
T Consensus 28 GVl~aL~e~gi~~~~iaGtS~GAiva~l~A~g~~ 61 (306)
T COG1752 28 GVLKALEEAGIPIDVIAGTSAGAIVAALYAAGMD 61 (306)
T ss_pred HHHHHHHHcCCCccEEEecCHHHHHHHHHHcCCC
Confidence 3556667778888899999999999999998653
No 244
>COG2830 Uncharacterized protein conserved in bacteria [Function unknown]
Probab=77.75 E-value=3.4 Score=25.94 Aligned_cols=73 Identities=12% Similarity=0.090 Sum_probs=42.5
Q ss_pred EeecCCCCCHhhHHHHHHhhhCCce-EEEecCCCCCCCccchhhHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhC
Q psy1324 2 LFLHGFPESWYIWKHQMSEFSHEYW-TVAVDIKTNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKY 80 (115)
Q Consensus 2 l~~hG~~~~~~~~~~~~~~l~~~~~-v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~ 80 (115)
|..-|++...+...+++ +.+++. +++.|+....-. .+.-..+.+.+|++|||-.+|-+.++..
T Consensus 15 vyFaGwgtpps~v~HLi--lpeN~dl~lcYDY~dl~ld--------------fDfsAy~hirlvAwSMGVwvAeR~lqg~ 78 (214)
T COG2830 15 VYFAGWGTPPSAVNHLI--LPENHDLLLCYDYQDLNLD--------------FDFSAYRHIRLVAWSMGVWVAERVLQGI 78 (214)
T ss_pred EEEecCCCCHHHHhhcc--CCCCCcEEEEeehhhcCcc--------------cchhhhhhhhhhhhhHHHHHHHHHHhhc
Confidence 45556666666554431 233443 445566544222 0111235678999999999999998886
Q ss_pred cccccceEEecC
Q psy1324 81 PELVVKSIIINV 92 (115)
Q Consensus 81 ~~~v~~~v~~~~ 92 (115)
+.+..+.+++
T Consensus 79 --~lksatAiNG 88 (214)
T COG2830 79 --RLKSATAING 88 (214)
T ss_pred --cccceeeecC
Confidence 4455555553
No 245
>cd07227 Pat_Fungal_NTE1 Fungal patatin-like phospholipase domain containing protein 6. These are fungal Neuropathy Target Esterase (NTE), commonly referred to as NTE1. Patatin-like phospholipase. NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This family includes NTE1 from fungi.
Probab=77.51 E-value=5.7 Score=26.74 Aligned_cols=32 Identities=13% Similarity=0.055 Sum_probs=25.1
Q ss_pred HHHHHHHhCCCCeeEEEEchhHHHHHHHHHhC
Q psy1324 49 LKVFLDHLGRNRCILIGRDFGGSLVWSFLDKY 80 (115)
Q Consensus 49 ~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~ 80 (115)
+.+.+++.+.+.=.+.|-|+|+.++..++...
T Consensus 28 VL~aLeE~gi~~d~v~GtSaGAiiga~ya~g~ 59 (269)
T cd07227 28 ILQALEEAGIPIDAIGGTSIGSFVGGLYAREA 59 (269)
T ss_pred HHHHHHHcCCCccEEEEECHHHHHHHHHHcCC
Confidence 44455666777668899999999999998874
No 246
>PF05576 Peptidase_S37: PS-10 peptidase S37; InterPro: IPR008761 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. These group of serine peptidases belong to MEROPS peptidase family S37 (clan SC). The members of this group of secreted peptidases are restricted to bacteria. In Streptomyces lividans the peptidase removes tripeptides from the N terminus of extracellular proteins (tripeptidyl aminopeptidase,Tap) [, ].
Probab=77.15 E-value=1.6 Score=31.20 Aligned_cols=71 Identities=13% Similarity=0.129 Sum_probs=52.4
Q ss_pred CceEEEecCCCCCCC-ccch-h------hHHHHHHHHHHHhC---CCCeeEEEEchhHHHHHHHHHhCcccccceEEecC
Q psy1324 24 EYWTVAVDIKTNFRT-IADR-Y------FLVDSLKVFLDHLG---RNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINV 92 (115)
Q Consensus 24 ~~~v~~~d~~g~g~s-~~~~-~------~~~~~~~~~~~~~~---~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~ 92 (115)
+-+-+.++.|-++.| |... + +-+.+.-.+++.+. .++.+-.|-|-||+.+..+=.-+|+.+++.|---.
T Consensus 88 d~NQl~vEhRfF~~SrP~p~DW~~Lti~QAA~D~Hri~~A~K~iY~~kWISTG~SKGGmTa~y~rrFyP~DVD~tVaYVA 167 (448)
T PF05576_consen 88 DGNQLSVEHRFFGPSRPEPADWSYLTIWQAASDQHRIVQAFKPIYPGKWISTGGSKGGMTAVYYRRFYPDDVDGTVAYVA 167 (448)
T ss_pred ccceEEEEEeeccCCCCCCCCcccccHhHhhHHHHHHHHHHHhhccCCceecCcCCCceeEEEEeeeCCCCCCeeeeeec
Confidence 667788889989888 4433 2 44555555555553 36888899999999999987779999999886555
Q ss_pred CC
Q psy1324 93 PH 94 (115)
Q Consensus 93 ~~ 94 (115)
|.
T Consensus 168 P~ 169 (448)
T PF05576_consen 168 PN 169 (448)
T ss_pred cc
Confidence 54
No 247
>cd07210 Pat_hypo_W_succinogenes_WS1459_like Hypothetical patatin similar to WS1459 of Wolinella succinogenes. Patatin-like phospholipase. This family predominantly consists of bacterial patatin glycoproteins. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=76.47 E-value=6.7 Score=25.45 Aligned_cols=30 Identities=17% Similarity=0.141 Sum_probs=22.9
Q ss_pred HHHHhCCCCeeEEEEchhHHHHHHHHHhCc
Q psy1324 52 FLDHLGRNRCILIGRDFGGSLVWSFLDKYP 81 (115)
Q Consensus 52 ~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~ 81 (115)
.+++.+.+.-.+.|-|.|+.++..++...+
T Consensus 21 aL~e~gi~~~~i~GtSaGAi~aa~~a~g~~ 50 (221)
T cd07210 21 ALLEMGLEPSAISGTSAGALVGGLFASGIS 50 (221)
T ss_pred HHHHcCCCceEEEEeCHHHHHHHHHHcCCC
Confidence 334446666679999999999999997653
No 248
>COG4553 DepA Poly-beta-hydroxyalkanoate depolymerase [Lipid metabolism]
Probab=75.41 E-value=25 Score=24.53 Aligned_cols=85 Identities=8% Similarity=-0.008 Sum_probs=57.0
Q ss_pred CHhhHHHHHHhhhCCceEEEecCCCCCCCccch--h---hHHHHHHHHHHHhCCCCeeEEEEchhHH-----HHHHHHHh
Q psy1324 10 SWYIWKHQMSEFSHEYWTVAVDIKTNFRTIADR--Y---FLVDSLKVFLDHLGRNRCILIGRDFGGS-----LVWSFLDK 79 (115)
Q Consensus 10 ~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~--~---~~~~~~~~~~~~~~~~~~~lvg~S~Gg~-----~a~~~~~~ 79 (115)
.....+..++.+-....++..||-.-..-|... | +.++.+.++++.+| ...++++-|.=+. +++.....
T Consensus 116 ~aTLLR~TV~alLp~~~vyitDW~dAr~Vp~~~G~FdldDYIdyvie~~~~~G-p~~hv~aVCQP~vPvLAAisLM~~~~ 194 (415)
T COG4553 116 YATLLRGTVEALLPYHDVYITDWVDARMVPLEAGHFDLDDYIDYVIEMINFLG-PDAHVMAVCQPTVPVLAAISLMEEDG 194 (415)
T ss_pred HHHHHHHHHHHhccccceeEeeccccceeecccCCccHHHHHHHHHHHHHHhC-CCCcEEEEecCCchHHHHHHHHHhcC
Confidence 345566666776667778887775432223322 4 78888899999998 4478888887654 34444444
Q ss_pred CcccccceEEecCCCC
Q psy1324 80 YPELVVKSIIINVPHP 95 (115)
Q Consensus 80 ~~~~v~~~v~~~~~~~ 95 (115)
.|..-..++++++|..
T Consensus 195 ~p~~PssMtlmGgPID 210 (415)
T COG4553 195 DPNVPSSMTLMGGPID 210 (415)
T ss_pred CCCCCceeeeecCccc
Confidence 6777788999998864
No 249
>cd07228 Pat_NTE_like_bacteria Bacterial patatin-like phospholipase domain containing protein 6. Bacterial patatin-like phospholipase domain containing protein 6. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. This group includes YCHK and rssA from Escherichia coli as well as Ylbk from Bacillus amyloliquefaciens.
Probab=73.63 E-value=7.7 Score=24.00 Aligned_cols=30 Identities=17% Similarity=0.127 Sum_probs=22.9
Q ss_pred HHHHhCCCCeeEEEEchhHHHHHHHHHhCc
Q psy1324 52 FLDHLGRNRCILIGRDFGGSLVWSFLDKYP 81 (115)
Q Consensus 52 ~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~ 81 (115)
.+++.+.+.-.++|-|.|+.++..++...+
T Consensus 21 ~L~e~g~~~d~i~GtSaGAi~aa~~a~g~~ 50 (175)
T cd07228 21 ALEEEGIEIDIIAGSSIGALVGALYAAGHL 50 (175)
T ss_pred HHHHCCCCeeEEEEeCHHHHHHHHHHcCCC
Confidence 334445555678999999999999988764
No 250
>cd07209 Pat_hypo_Ecoli_Z1214_like Hypothetical patatin similar to Z1214 protein of Escherichia coli. Patatin-like phospholipase similar to Z1214 protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=73.31 E-value=8.8 Score=24.70 Aligned_cols=31 Identities=19% Similarity=0.107 Sum_probs=24.1
Q ss_pred HHHHHhCCCCeeEEEEchhHHHHHHHHHhCc
Q psy1324 51 VFLDHLGRNRCILIGRDFGGSLVWSFLDKYP 81 (115)
Q Consensus 51 ~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~ 81 (115)
+.+.+.+...-.+.|.|.|+.++..++...+
T Consensus 18 ~aL~e~g~~~d~i~GtS~GAl~aa~~a~~~~ 48 (215)
T cd07209 18 KALAEAGIEPDIISGTSIGAINGALIAGGDP 48 (215)
T ss_pred HHHHHcCCCCCEEEEECHHHHHHHHHHcCCc
Confidence 3344456666678999999999999999875
No 251
>KOG0781|consensus
Probab=72.87 E-value=26 Score=26.09 Aligned_cols=66 Identities=14% Similarity=0.140 Sum_probs=34.3
Q ss_pred cCCCCCHhhHHHHHHhh--hCCceEEEecCCCCCCCccchhhHHHHHHHHHHHhCCCCeeEEEEchhHHHH
Q psy1324 5 HGFPESWYIWKHQMSEF--SHEYWTVAVDIKTNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLV 73 (115)
Q Consensus 5 hG~~~~~~~~~~~~~~l--~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a 73 (115)
-||+.+...-...+-+. .++|.|+.+|-.|.-.... .+...+..+++.-..+.+..||.-+=|.=+
T Consensus 445 kGYgkd~a~vak~AI~~a~~~gfDVvLiDTAGR~~~~~---~lm~~l~k~~~~~~pd~i~~vgealvg~ds 512 (587)
T KOG0781|consen 445 KGYGKDAAGVAKEAIQEARNQGFDVVLIDTAGRMHNNA---PLMTSLAKLIKVNKPDLILFVGEALVGNDS 512 (587)
T ss_pred hhcCCChHHHHHHHHHHHHhcCCCEEEEeccccccCCh---hHHHHHHHHHhcCCCceEEEehhhhhCcHH
Confidence 46776655544333233 3499999999887644411 223333334433333445555555444433
No 252
>COG4822 CbiK Cobalamin biosynthesis protein CbiK, Co2+ chelatase [Coenzyme metabolism]
Probab=71.52 E-value=26 Score=23.12 Aligned_cols=55 Identities=16% Similarity=0.148 Sum_probs=25.8
Q ss_pred CEeecCCCCCHhhHHHHHHhh-h-CCc-eEEEecCCCCCCCccchhhHHHHHHHHHHHhCCCCeeE
Q psy1324 1 MLFLHGFPESWYIWKHQMSEF-S-HEY-WTVAVDIKTNFRTIADRYFLVDSLKVFLDHLGRNRCIL 63 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l-~-~~~-~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~l 63 (115)
|++-||...+........+.. . .+| .++....-|+ -.++++.+.++.-+.+.+.+
T Consensus 141 vlmgHGt~h~s~~~YacLd~~~~~~~f~~v~v~~ve~y--------P~~d~vi~~l~~~~~~~v~L 198 (265)
T COG4822 141 VLMGHGTDHHSNAAYACLDHVLDEYGFDNVFVAAVEGY--------PLVDTVIEYLRKNGIKEVHL 198 (265)
T ss_pred EEEecCCCccHHHHHHHHHHHHHhcCCCceEEEEecCC--------CcHHHHHHHHHHcCCceEEE
Confidence 355666665554443333332 2 245 4444333333 23455555555555554443
No 253
>cd07230 Pat_TGL4-5_like Triacylglycerol lipase 4 and 5. TGL4 and TGL5 are triacylglycerol lipases that are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. Tgl4 is a functional ortholog of mammalian adipose TG lipase (ATGL) and is phosphorylated and activated by cyclin-dependent kinase 1 (Cdk1/Cdc28). TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. This family includes TGL4 (STC1) and TGL5 (STC2) from Saccharomyces cerevisiae.
Probab=70.64 E-value=4.2 Score=29.19 Aligned_cols=35 Identities=14% Similarity=-0.013 Sum_probs=25.8
Q ss_pred HHHHHHhCCCCeeEEEEchhHHHHHHHHHhCcccc
Q psy1324 50 KVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELV 84 (115)
Q Consensus 50 ~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~~~v 84 (115)
...+.+.+..+=++.|-|.|+.++..++...++.+
T Consensus 92 LkaL~E~gl~p~vIsGTSaGAivAal~as~~~eel 126 (421)
T cd07230 92 LKALFEANLLPRIISGSSAGSIVAAILCTHTDEEI 126 (421)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHHH
Confidence 33344445666689999999999999998766553
No 254
>KOG0736|consensus
Probab=70.21 E-value=53 Score=26.12 Aligned_cols=95 Identities=16% Similarity=0.032 Sum_probs=54.6
Q ss_pred CCHhhHHHHHHhhhC-CceEEEec-----CCCCCCC-ccch-h-hHHHHHHHHHHHhC---CCCeeEEEEchhHHHHHHH
Q psy1324 9 ESWYIWKHQMSEFSH-EYWTVAVD-----IKTNFRT-IADR-Y-FLVDSLKVFLDHLG---RNRCILIGRDFGGSLVWSF 76 (115)
Q Consensus 9 ~~~~~~~~~~~~l~~-~~~v~~~d-----~~g~g~s-~~~~-~-~~~~~~~~~~~~~~---~~~~~lvg~S~Gg~~a~~~ 76 (115)
++...-++++++... .-.|+.+| .|..|.+ ..+. + ..+-++.+=++.+. .++++++|..-===+ +.=
T Consensus 748 qSE~NVR~VFerAR~A~PCVIFFDELDSlAP~RG~sGDSGGVMDRVVSQLLAELDgls~~~s~~VFViGATNRPDL-LDp 826 (953)
T KOG0736|consen 748 QSEENVREVFERARSAAPCVIFFDELDSLAPNRGRSGDSGGVMDRVVSQLLAELDGLSDSSSQDVFVIGATNRPDL-LDP 826 (953)
T ss_pred chHHHHHHHHHHhhccCCeEEEeccccccCccCCCCCCccccHHHHHHHHHHHhhcccCCCCCceEEEecCCCccc-cCh
Confidence 344445566666654 55566666 3444555 2222 2 55555555555553 368888884322111 112
Q ss_pred HHhCcccccceEEecCCCChhHHHHHHh
Q psy1324 77 LDKYPELVVKSIIINVPHPAVFKQELKK 104 (115)
Q Consensus 77 ~~~~~~~v~~~v~~~~~~~~~~~~~~~~ 104 (115)
+...|.|+++++.++++........+.+
T Consensus 827 ALLRPGRFDKLvyvG~~~d~esk~~vL~ 854 (953)
T KOG0736|consen 827 ALLRPGRFDKLVYVGPNEDAESKLRVLE 854 (953)
T ss_pred hhcCCCccceeEEecCCccHHHHHHHHH
Confidence 2334789999999999987776665554
No 255
>cd07205 Pat_PNPLA6_PNPLA7_NTE1_like Patatin-like phospholipase domain containing protein 6, protein 7, and fungal NTE1. Patatin-like phospholipase domain containing protein 6 (PNPLA6) and protein 7 (PNPLA7) are included in this family. PNPLA6 is commonly known as Neuropathy Target Esterase (NTE). NTE has at least two functional domains: the N-terminal domain putatively regulatory domain and the C-terminal catalytic domain which shows esterase activity. NTE shows phospholipase activity for lysophosphatidylcholine (LPC) and phosphatidylcholine (PC). Exposure of NTE to organophosphates leads to organophosphate-induced delayed neurotoxicity (OPIDN). OPIDN is a progressive neurological condition that is characterized by weakness, paralysis, pain, and paresthesia. PNPLA7 is an insulin-regulated phospholipase that is homologus to Neuropathy Target Esterase (NTE or PNPLA6) and is also known as NTE-related esterase (NRE). Human NRE is predominantly expressed in prostate, white adipose, and panc
Probab=68.09 E-value=14 Score=22.68 Aligned_cols=29 Identities=21% Similarity=0.212 Sum_probs=21.9
Q ss_pred HHHHhCCCCeeEEEEchhHHHHHHHHHhC
Q psy1324 52 FLDHLGRNRCILIGRDFGGSLVWSFLDKY 80 (115)
Q Consensus 52 ~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~ 80 (115)
.+++.+...-.+.|-|.|+.++..++...
T Consensus 21 ~L~~~~~~~d~i~GtSaGal~a~~~a~g~ 49 (175)
T cd07205 21 ALEEAGIPIDIVSGTSAGAIVGALYAAGY 49 (175)
T ss_pred HHHHcCCCeeEEEEECHHHHHHHHHHcCC
Confidence 33444555557899999999999998765
No 256
>cd07208 Pat_hypo_Ecoli_yjju_like Hypothetical patatin similar to yjju protein of Escherichia coli. Patatin-like phospholipase similar to yjju protein of Escherichia coli. This family predominantly consists of bacterial patatin glycoproteins, and some representatives from eukaryotes and archaea. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates.
Probab=67.77 E-value=14 Score=24.45 Aligned_cols=31 Identities=19% Similarity=0.112 Sum_probs=22.8
Q ss_pred HHHHhCCC-CeeEEEEchhHHHHHHHHHhCcc
Q psy1324 52 FLDHLGRN-RCILIGRDFGGSLVWSFLDKYPE 82 (115)
Q Consensus 52 ~~~~~~~~-~~~lvg~S~Gg~~a~~~~~~~~~ 82 (115)
.+.+.+.. .=.++|.|.|+.++..++...+.
T Consensus 19 al~e~~~~~fd~i~GtSaGAi~a~~~~~g~~~ 50 (266)
T cd07208 19 AFLEAGIRPFDLVIGVSAGALNAASYLSGQRG 50 (266)
T ss_pred HHHHcCCCCCCEEEEECHHHHhHHHHHhCCcc
Confidence 33444444 34789999999999999888654
No 257
>KOG4388|consensus
Probab=67.42 E-value=4.4 Score=30.63 Aligned_cols=67 Identities=16% Similarity=0.189 Sum_probs=37.9
Q ss_pred CceEEEecCCCCCCCccchh-----hHHHHHHHHHH---HhC--CCCeeEEEEchhHHHHHHHHHh----CcccccceEE
Q psy1324 24 EYWTVAVDIKTNFRTIADRY-----FLVDSLKVFLD---HLG--RNRCILIGRDFGGSLVWSFLDK----YPELVVKSII 89 (115)
Q Consensus 24 ~~~v~~~d~~g~g~s~~~~~-----~~~~~~~~~~~---~~~--~~~~~lvg~S~Gg~~a~~~~~~----~~~~v~~~v~ 89 (115)
+..++.+|+.-- |+..| +..-....+++ .+| .++++++|-|.||.+....+.+ .-+.-+++++
T Consensus 427 ~cPiiSVdYSLA---PEaPFPRaleEv~fAYcW~inn~allG~TgEriv~aGDSAGgNL~~~VaLr~i~~gvRvPDGl~l 503 (880)
T KOG4388|consen 427 GCPIISVDYSLA---PEAPFPRALEEVFFAYCWAINNCALLGSTGERIVLAGDSAGGNLCFTVALRAIAYGVRVPDGLML 503 (880)
T ss_pred CCCeEEeeeccC---CCCCCCcHHHHHHHHHHHHhcCHHHhCcccceEEEeccCCCcceeehhHHHHHHhCCCCCCceEE
Confidence 888999886422 33333 22222223332 234 3799999999999975555444 3333456655
Q ss_pred ecCC
Q psy1324 90 INVP 93 (115)
Q Consensus 90 ~~~~ 93 (115)
.=++
T Consensus 504 aY~p 507 (880)
T KOG4388|consen 504 AYPP 507 (880)
T ss_pred ecCh
Confidence 5444
No 258
>COG3933 Transcriptional antiterminator [Transcription]
Probab=66.84 E-value=45 Score=24.47 Aligned_cols=69 Identities=16% Similarity=0.253 Sum_probs=47.0
Q ss_pred CEeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCCccchhhHHHHHHHHHHHhCCCCeeEEEEchhHHHHH
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVW 74 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~ 74 (115)
+|..||+. ++.....++.++-..--+.++|+|-- -+|. +..+.+.+.+++.+..+=.++=-+||...+.
T Consensus 112 IiiAHG~s-TASSmaevanrLL~~~~~~aiDMPLd-vsp~---~vle~l~e~~k~~~~~~GlllLVDMGSL~~f 180 (470)
T COG3933 112 IIIAHGYS-TASSMAEVANRLLGEEIFIAIDMPLD-VSPS---DVLEKLKEYLKERDYRSGLLLLVDMGSLTSF 180 (470)
T ss_pred EEEecCcc-hHHHHHHHHHHHhhccceeeecCCCc-CCHH---HHHHHHHHHHHhcCccCceEEEEecchHHHH
Confidence 46778875 55667778887766777889998832 2222 6788888888887766644455578866443
No 259
>cd07224 Pat_like Patatin-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=66.58 E-value=16 Score=23.96 Aligned_cols=33 Identities=15% Similarity=0.024 Sum_probs=24.1
Q ss_pred HHHHHHHhCCC--CeeEEEEchhHHHHHHHHHhCc
Q psy1324 49 LKVFLDHLGRN--RCILIGRDFGGSLVWSFLDKYP 81 (115)
Q Consensus 49 ~~~~~~~~~~~--~~~lvg~S~Gg~~a~~~~~~~~ 81 (115)
+.+.+.+.+.. .-.+.|-|+|+.++..++...+
T Consensus 17 Vl~~L~e~gi~~~~~~i~G~SAGAl~aa~~asg~~ 51 (233)
T cd07224 17 VLSLLIEAGVINETTPLAGASAGSLAAACSASGLS 51 (233)
T ss_pred HHHHHHHcCCCCCCCEEEEEcHHHHHHHHHHcCCC
Confidence 34444455554 3479999999999999998864
No 260
>TIGR02816 pfaB_fam PfaB family protein. The protein PfaB is part of four gene locus, similar to polyketide biosynthesis systems, responsible for omega-3 polyunsaturated fatty acid biosynthesis in several high pressure and/or cold-adapted bacteria. The fairly permissive trusted cutoff set for this model allows detection of homologs encoded near homologs to other proteins of the locus: PfaA, PfaC, and/or PfaD. The likely role in every case is either polyunsaturated fatty acid or polyketide biosynthesis.
Probab=66.57 E-value=10 Score=28.31 Aligned_cols=31 Identities=19% Similarity=0.394 Sum_probs=23.0
Q ss_pred HHHH-HHhCCCCeeEEEEchhHHHHHHHHHhC
Q psy1324 50 KVFL-DHLGRNRCILIGRDFGGSLVWSFLDKY 80 (115)
Q Consensus 50 ~~~~-~~~~~~~~~lvg~S~Gg~~a~~~~~~~ 80 (115)
.+.+ +..+.++-.++|||+|=+.++..+--.
T Consensus 255 a~ll~~~~GI~Pdav~GHSlGE~aAa~aAGvl 286 (538)
T TIGR02816 255 TQLLCDEFAIKPDFALGYSKGEASMWASLGVW 286 (538)
T ss_pred HHHHHHhcCCCCCEEeecCHHHHHHHHHhCCC
Confidence 3445 577889999999999977766665543
No 261
>cd07232 Pat_PLPL Patain-like phospholipase. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants and fungi. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have been found also in vertebrates.
Probab=64.98 E-value=6.7 Score=28.05 Aligned_cols=39 Identities=10% Similarity=-0.038 Sum_probs=27.9
Q ss_pred HHHHHHHhCCCCeeEEEEchhHHHHHHHHHhCcccccce
Q psy1324 49 LKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKS 87 (115)
Q Consensus 49 ~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~ 87 (115)
+...+.+.+..+=++.|.|.|+.++..++...++.+..+
T Consensus 85 VlkaL~e~gllp~iI~GtSAGAivaalla~~t~~el~~~ 123 (407)
T cd07232 85 VVKALLDADLLPNVISGTSGGSLVAALLCTRTDEELKQL 123 (407)
T ss_pred HHHHHHhCCCCCCEEEEECHHHHHHHHHHcCCHHHHHHH
Confidence 333344446666689999999999999998766555444
No 262
>cd07231 Pat_SDP1-like Sugar-Dependent 1 like lipase. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This acyl-hydrolase domain is homologus to yeast triacylglycerol lipase 3 and human adipose triglyceride lipase. This family includes SDP1 from Arabidopsis thaliana.
Probab=62.59 E-value=10 Score=26.37 Aligned_cols=34 Identities=12% Similarity=-0.009 Sum_probs=24.5
Q ss_pred HHHHHHhCCCCeeEEEEchhHHHHHHHHHhCccc
Q psy1324 50 KVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPEL 83 (115)
Q Consensus 50 ~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~~~ 83 (115)
...+.+.+..+-++.|-|.|+.++..++...++.
T Consensus 87 lkaL~e~gl~p~~i~GsSaGAivaa~~~~~t~~E 120 (323)
T cd07231 87 VRTLVEHQLLPRVIAGSSVGSIVCAIIATRTDEE 120 (323)
T ss_pred HHHHHHcCCCCCEEEEECHHHHHHHHHHcCCHHH
Confidence 3334444666668999999999999988765443
No 263
>PF10142 PhoPQ_related: PhoPQ-activated pathogenicity-related protein; InterPro: IPR009199 Proteins in this entry are believed to play a role in virulence/pathogenicity in Salmonella. Salmonella typhi PqaA has been shown to be activated by PhoP/Q two-component regulatory system, which regulates many virulence genes []. It has been also shown to confer resistance to antimicrobial peptides (melittin) []. Members of this family are predicted to belong to the alpha/beta hydrolase domain superfamily.
Probab=61.66 E-value=33 Score=24.38 Aligned_cols=48 Identities=15% Similarity=0.178 Sum_probs=35.4
Q ss_pred HHHHHHHHh---CCCCeeEEEEchhHHHHHHHHHhCcccccceEEecCCCCh
Q psy1324 48 SLKVFLDHL---GRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHPA 96 (115)
Q Consensus 48 ~~~~~~~~~---~~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~~ 96 (115)
.+.+++++. ..+++++.|.|-=|..++..+. -.+||.+++-+.-...+
T Consensus 158 ~vq~~~~~~~~~~i~~FvV~GaSKRGWTtWltaa-~D~RV~aivP~Vid~LN 208 (367)
T PF10142_consen 158 AVQEFLKKKFGVNIEKFVVTGASKRGWTTWLTAA-VDPRVKAIVPIVIDVLN 208 (367)
T ss_pred HHHHHHHhhcCCCccEEEEeCCchHhHHHHHhhc-cCcceeEEeeEEEccCC
Confidence 344444444 4679999999999999999999 45779998866654433
No 264
>cd07229 Pat_TGL3_like Triacylglycerol lipase 3. Triacylglycerol lipase 3 (TGL3) are responsible for all the TAG lipase activity of the lipid particle. Triacylglycerol (TAG) lipases are also necessary for the mobilization of TAG stored in lipid particles. TGL3 contains the consensus sequence motif GXSXG, which is found in lipolytic enzymes. This family includes Tgl3p from Saccharomyces cerevisiae.
Probab=61.02 E-value=9.1 Score=27.32 Aligned_cols=38 Identities=16% Similarity=-0.044 Sum_probs=27.7
Q ss_pred HHHHHHhCCCCeeEEEEchhHHHHHHHHHhCcccccce
Q psy1324 50 KVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKS 87 (115)
Q Consensus 50 ~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~ 87 (115)
...+.+.+..+=++.|-|.|+.++..++...++.+..+
T Consensus 102 ~kaL~e~gl~p~~i~GtS~Gaivaa~~a~~~~~e~~~~ 139 (391)
T cd07229 102 VKALWLRGLLPRIITGTATGALIAALVGVHTDEELLRF 139 (391)
T ss_pred HHHHHHcCCCCceEEEecHHHHHHHHHHcCCHHHHHHH
Confidence 34444556666689999999999999999765554444
No 265
>COG4667 Predicted esterase of the alpha-beta hydrolase superfamily [General function prediction only]
Probab=60.29 E-value=16 Score=24.82 Aligned_cols=41 Identities=20% Similarity=0.225 Sum_probs=28.5
Q ss_pred HHHHHHHHHHhCCCCe-eEEEEchhHHHHHHHHHhCcccccce
Q psy1324 46 VDSLKVFLDHLGRNRC-ILIGRDFGGSLVWSFLDKYPELVVKS 87 (115)
Q Consensus 46 ~~~~~~~~~~~~~~~~-~lvg~S~Gg~~a~~~~~~~~~~v~~~ 87 (115)
+--+.++++.- ..++ .++|.|+|+.....++.+.+.+-.++
T Consensus 27 AGVLD~fl~a~-~~~f~~~~GvSAGA~n~~aYls~Q~gra~~~ 68 (292)
T COG4667 27 AGVLDEFLRAN-FNPFDLVVGVSAGALNLVAYLSKQRGRARRV 68 (292)
T ss_pred HHHHHHHHHhc-cCCcCeeeeecHhHHhHHHHhhcCCchHHHH
Confidence 44455566433 3444 46999999999999999988764444
No 266
>PF09994 DUF2235: Uncharacterized alpha/beta hydrolase domain (DUF2235); InterPro: IPR018712 This domain has no known function.
Probab=60.05 E-value=22 Score=23.96 Aligned_cols=22 Identities=23% Similarity=0.303 Sum_probs=19.6
Q ss_pred CCCeeEEEEchhHHHHHHHHHh
Q psy1324 58 RNRCILIGRDFGGSLVWSFLDK 79 (115)
Q Consensus 58 ~~~~~lvg~S~Gg~~a~~~~~~ 79 (115)
..+++++|+|-|+..|..++..
T Consensus 91 gd~I~lfGFSRGA~~AR~~a~~ 112 (277)
T PF09994_consen 91 GDRIYLFGFSRGAYTARAFANM 112 (277)
T ss_pred cceEEEEecCccHHHHHHHHHH
Confidence 3689999999999999999866
No 267
>COG0218 Predicted GTPase [General function prediction only]
Probab=58.12 E-value=18 Score=23.38 Aligned_cols=12 Identities=17% Similarity=-0.083 Sum_probs=10.8
Q ss_pred EEEecCCCCCCC
Q psy1324 27 TVAVDIKTNFRT 38 (115)
Q Consensus 27 v~~~d~~g~g~s 38 (115)
...+|+||+|..
T Consensus 72 ~~lVDlPGYGyA 83 (200)
T COG0218 72 LRLVDLPGYGYA 83 (200)
T ss_pred EEEEeCCCcccc
Confidence 678999999998
No 268
>cd01714 ETF_beta The electron transfer flavoprotein (ETF) serves as a specific electron acceptor for various mitochondrial dehydrogenases. ETF transfers electrons to the main respiratory chain via ETF-ubiquinone oxidoreductase. ETF is an heterodimer that consists of an alpha and a beta subunit which binds one molecule of FAD per dimer . A similar system also exists in some bacteria. The homologous pair of proteins (FixA/FixB) are essential for nitrogen fixation. The beta subunit protein is distantly related to and forms a heterodimer with the alpha subunit.
Probab=57.66 E-value=44 Score=21.39 Aligned_cols=51 Identities=14% Similarity=0.125 Sum_probs=34.7
Q ss_pred eEEEecCCCCCCC-ccchhhHHHHHHHHHHHhCCCCeeEEEEch----hHHHHHHHHHhC
Q psy1324 26 WTVAVDIKTNFRT-IADRYFLVDSLKVFLDHLGRNRCILIGRDF----GGSLVWSFLDKY 80 (115)
Q Consensus 26 ~v~~~d~~g~g~s-~~~~~~~~~~~~~~~~~~~~~~~~lvg~S~----Gg~~a~~~~~~~ 80 (115)
+++..+-+..... +. .+++.+.+++++.+ ..++++|+|. |..++..++.+.
T Consensus 79 ~V~~~~~~~~~~~~~e---~~a~al~~~i~~~~-p~lVL~~~t~~~~~grdlaprlAarL 134 (202)
T cd01714 79 RAILVSDRAFAGADTL---ATAKALAAAIKKIG-VDLILTGKQSIDGDTGQVGPLLAELL 134 (202)
T ss_pred EEEEEecccccCCChH---HHHHHHHHHHHHhC-CCEEEEcCCcccCCcCcHHHHHHHHh
Confidence 4555554443322 11 56777777777766 7889999988 778888888875
No 269
>PF00448 SRP54: SRP54-type protein, GTPase domain; InterPro: IPR000897 The signal recognition particle (SRP) is a multimeric protein, which along with its conjugate receptor (SR), is involved in targeting secretory proteins to the rough endoplasmic reticulum (RER) membrane in eukaryotes, or to the plasma membrane in prokaryotes [, ]. SRP recognises the signal sequence of the nascent polypeptide on the ribosome, retards its elongation, and docks the SRP-ribosome-polypeptide complex to the RER membrane via the SR receptor. Eukaryotic SRP consists of six polypeptides (SRP9, SRP14, SRP19, SRP54, SRP68 and SRP72) and a single 300 nucleotide 7S RNA molecule. The RNA component catalyses the interaction of SRP with its SR receptor []. In higher eukaryotes, the SRP complex consists of the Alu domain and the S domain linked by the SRP RNA. The Alu domain consists of a heterodimer of SRP9 and SRP14 bound to the 5' and 3' terminal sequences of SRP RNA. This domain is necessary for retarding the elongation of the nascent polypeptide chain, which gives SRP time to dock the ribosome-polypeptide complex to the RER membrane. In archaea, the SRP complex contains 7S RNA like its eukaryotic counterpart, yet only includes two of the six protein subunits found in the eukarytic complex: SRP19 and SRP54 []. This entry represents the GTPase domain of the 54 kDa SRP54 component, a GTP-binding protein that interacts with the signal sequence when it emerges from the ribosome. SRP54 of the signal recognition particle has a three-domain structure: an N-terminal helical bundle domain, a GTPase domain, and the M-domain that binds the 7s RNA and also binds the signal sequence. The extreme C-terminal region is glycine-rich and lower in complexity and poorly conserved between species. The GTPase domain is evolutionary related to P-loop NTPase domains found in a variety of other proteins []. These proteins include Escherichia coli and Bacillus subtilis ffh protein (P48), which seems to be the prokaryotic counterpart of SRP54; signal recognition particle receptor alpha subunit (docking protein), an integral membrane GTP-binding protein which ensures, in conjunction with SRP, the correct targeting of nascent secretory proteins to the endoplasmic reticulum membrane; bacterial FtsY protein, which is believed to play a similar role to that of the docking protein in eukaryotes; the pilA protein from Neisseria gonorrhoeae, the homologue of ftsY; and bacterial flagellar biosynthesis protein flhF.; GO: 0005525 GTP binding, 0006614 SRP-dependent cotranslational protein targeting to membrane; PDB: 2OG2_A 3B9Q_A 3DM9_B 3DMD_B 3E70_C 3DM5_B 2XXA_C 2J28_9 1ZU5_B 1ZU4_A ....
Probab=56.50 E-value=50 Score=21.04 Aligned_cols=72 Identities=17% Similarity=0.121 Sum_probs=42.6
Q ss_pred HHhhh-CCceEEEecCCCCCCCccchhhHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhC-c-ccccceEEecC
Q psy1324 18 MSEFS-HEYWTVAVDIKTNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKY-P-ELVVKSIIINV 92 (115)
Q Consensus 18 ~~~l~-~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~-~-~~v~~~v~~~~ 92 (115)
.+.+. +++.++.+|-+|...... +..+.+.++++......++++--+..+.-....+..+ . -.+.++|+.--
T Consensus 76 l~~~~~~~~D~vlIDT~Gr~~~d~---~~~~el~~~~~~~~~~~~~LVlsa~~~~~~~~~~~~~~~~~~~~~lIlTKl 150 (196)
T PF00448_consen 76 LEKFRKKGYDLVLIDTAGRSPRDE---ELLEELKKLLEALNPDEVHLVLSATMGQEDLEQALAFYEAFGIDGLILTKL 150 (196)
T ss_dssp HHHHHHTTSSEEEEEE-SSSSTHH---HHHHHHHHHHHHHSSSEEEEEEEGGGGGHHHHHHHHHHHHSSTCEEEEEST
T ss_pred HHHHhhcCCCEEEEecCCcchhhH---HHHHHHHHHhhhcCCccceEEEecccChHHHHHHHHHhhcccCceEEEEee
Confidence 34443 479999999998864411 4566777777777655666655444444444444443 2 23788886653
No 270
>cd07204 Pat_PNPLA_like Patatin-like phospholipase domain containing protein family. Members of this family share a patain domain, initially discovered in potato tubers. PNPLA protein members show non-specific hydrolase activity with a variety of substrates such as triacylglycerol, phospholipids, and retinylesters. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly). Nomenclature of PNPLA family could be misleading as some of the mammalian members of this family show hydrolase, but no phospholipase activity.
Probab=55.73 E-value=30 Score=22.82 Aligned_cols=20 Identities=15% Similarity=0.094 Sum_probs=18.1
Q ss_pred eEEEEchhHHHHHHHHHhCc
Q psy1324 62 ILIGRDFGGSLVWSFLDKYP 81 (115)
Q Consensus 62 ~lvg~S~Gg~~a~~~~~~~~ 81 (115)
.+.|-|.|+.++..++...+
T Consensus 34 ~i~GtSAGAl~aa~~a~g~~ 53 (243)
T cd07204 34 RIAGASAGAIVAAVVLCGVS 53 (243)
T ss_pred EEEEEcHHHHHHHHHHhCCC
Confidence 78999999999999998764
No 271
>cd07218 Pat_iPLA2 Calcium-independent phospholipase A2; Classified as Group IVA-1 PLA2. Calcium-independent phospholipase A2; otherwise known as Group IVA-1 PLA2. It contains the lipase consensus sequence (Gly-X-Ser-X-Gly);mutagenesis experiments confirm the role of this serine as a nucleophile. Some members of this group show triacylglycerol lipase activity (EC 3:1:1:3). Members include iPLA-1, iPLA-2, and iPLA-3 from Aedes aegypti and show acylglycerol transacylase/lipase activity. Also includes putative iPLA2-eta from Pediculus humanus corporis which shows patatin-like phospholipase activity.
Probab=55.44 E-value=32 Score=22.80 Aligned_cols=20 Identities=20% Similarity=0.285 Sum_probs=17.7
Q ss_pred eEEEEchhHHHHHHHHHhCc
Q psy1324 62 ILIGRDFGGSLVWSFLDKYP 81 (115)
Q Consensus 62 ~lvg~S~Gg~~a~~~~~~~~ 81 (115)
.+.|-|+|+.++..++...+
T Consensus 33 ~i~GtSAGAl~aa~~a~g~~ 52 (245)
T cd07218 33 KISGASAGALAACCLLCDLP 52 (245)
T ss_pred eEEEEcHHHHHHHHHHhCCc
Confidence 49999999999999988754
No 272
>cd07212 Pat_PNPLA9 Patatin-like phospholipase domain containing protein 9. PNPLA9 is a Ca-independent phospholipase that catalyzes the hydrolysis of glycerophospholipids at the sn-2 position. PNPLA9 is also known as PLA2G6 (phospholipase A2 group VI) or iPLA2beta. PLA2G6 is stimulated by ATP and inhibited by bromoenol lactone (BEL). In humans, PNPLA9 in expressed ubiquitously and is involved in signal transduction, cell proliferation, and apoptotic cell death. Mutations in human PLA2G6 leads to infantile neuroaxonal dystrophy (INAD) and idiopathic neurodegeneration with brain iron accumulation (NBIA). This family includes PLA2G6 from Homo sapiens and Rattus norvegicus.
Probab=53.10 E-value=40 Score=23.21 Aligned_cols=20 Identities=25% Similarity=0.408 Sum_probs=17.0
Q ss_pred eEEEEchhHHHHHHHHHhCc
Q psy1324 62 ILIGRDFGGSLVWSFLDKYP 81 (115)
Q Consensus 62 ~lvg~S~Gg~~a~~~~~~~~ 81 (115)
.+.|.|.||.++..++..++
T Consensus 35 ~i~GTStGgiIA~~la~g~s 54 (312)
T cd07212 35 WIAGTSTGGILALALLHGKS 54 (312)
T ss_pred EEEeeChHHHHHHHHHcCCC
Confidence 56999999999999987653
No 273
>PF03283 PAE: Pectinacetylesterase
Probab=52.98 E-value=30 Score=24.45 Aligned_cols=21 Identities=24% Similarity=0.245 Sum_probs=17.1
Q ss_pred CCeeEEEEchhHHHHHHHHHh
Q psy1324 59 NRCILIGRDFGGSLVWSFLDK 79 (115)
Q Consensus 59 ~~~~lvg~S~Gg~~a~~~~~~ 79 (115)
++++|.|.|.||.-+...+..
T Consensus 156 ~~vlltG~SAGG~g~~~~~d~ 176 (361)
T PF03283_consen 156 KQVLLTGCSAGGLGAILHADY 176 (361)
T ss_pred ceEEEeccChHHHHHHHHHHH
Confidence 689999999999977765554
No 274
>COG0331 FabD (acyl-carrier-protein) S-malonyltransferase [Lipid metabolism]
Probab=52.97 E-value=26 Score=24.23 Aligned_cols=22 Identities=14% Similarity=0.182 Sum_probs=17.7
Q ss_pred CCCCeeEEEEchhHHHHHHHHH
Q psy1324 57 GRNRCILIGRDFGGSLVWSFLD 78 (115)
Q Consensus 57 ~~~~~~lvg~S~Gg~~a~~~~~ 78 (115)
+.++.++.|||+|=+.|+..+.
T Consensus 83 ~~~p~~~aGHSlGEysAl~~ag 104 (310)
T COG0331 83 GVKPDFVAGHSLGEYSALAAAG 104 (310)
T ss_pred CCCCceeecccHhHHHHHHHcc
Confidence 4678899999999887776655
No 275
>cd07206 Pat_TGL3-4-5_SDP1 Triacylglycerol lipase 3, 4, and 5 and Sugar-Dependent 1 lipase. Triacylglycerol lipases are involved in triacylglycerol mobilization and degradation; they are found in lipid particles. TGL4 is 30% homologus to TGL3, whereas TGL5 is 26% homologus to TGL3. Sugar-Dependent 1 (SDP1) lipase has a patatin-like acyl-hydrolase domain that initiates the breakdown of storage oil in germinating Arabidopsis seeds. This family includes subfamilies of proteins: TGL3, TGL4, TGL5, and SDP1.
Probab=52.66 E-value=31 Score=23.78 Aligned_cols=27 Identities=7% Similarity=-0.042 Sum_probs=21.0
Q ss_pred HhCCCCeeEEEEchhHHHHHHHHHhCc
Q psy1324 55 HLGRNRCILIGRDFGGSLVWSFLDKYP 81 (115)
Q Consensus 55 ~~~~~~~~lvg~S~Gg~~a~~~~~~~~ 81 (115)
+.+..+-.+.|.|.|+.++..++....
T Consensus 93 e~~l~~~~i~GtSaGAi~aa~~~~~~~ 119 (298)
T cd07206 93 EQDLLPRVISGSSAGAIVAALLGTHTD 119 (298)
T ss_pred HcCCCCCEEEEEcHHHHHHHHHHcCCc
Confidence 345556679999999999999887543
No 276
>cd01819 Patatin_and_cPLA2 Patatins and Phospholipases. Patatin-like phospholipase. This family consists of various patatin glycoproteins from plants. The patatin protein accounts for up to 40% of the total soluble protein in potato tubers. Patatin is a storage protein, but it also has the enzymatic activity of a lipid acyl hydrolase, catalyzing the cleavage of fatty acids from membrane lipids. Members of this family have also been found in vertebrates. This family also includes the catalytic domain of cytosolic phospholipase A2 (PLA2; EC 3.1.1.4) hydrolyzes the sn-2-acyl ester bond of phospholipids to release arachidonic acid. At the active site, cPLA2 contains a serine nucleophile through which the catalytic mechanism is initiated. The active site is partially covered by a solvent-accessible flexible lid. cPLA2 displays interfacial activation as it exists in both "closed lid" and "open lid" forms.
Probab=52.26 E-value=40 Score=20.42 Aligned_cols=19 Identities=16% Similarity=0.099 Sum_probs=16.1
Q ss_pred CCeeEEEEchhHHHHHHHH
Q psy1324 59 NRCILIGRDFGGSLVWSFL 77 (115)
Q Consensus 59 ~~~~lvg~S~Gg~~a~~~~ 77 (115)
..-.+.|.|.|+.++..++
T Consensus 28 ~~~~~~G~SaGa~~~~~~~ 46 (155)
T cd01819 28 CVTYLAGTSGGAWVAATLY 46 (155)
T ss_pred CCCEEEEEcHHHHHHHHHh
Confidence 4457799999999999887
No 277
>cd07220 Pat_PNPLA2 Patatin-like phospholipase domain containing protein 2. PNPLA2 plays a key role in hydrolysis of stored triacylglecerols and is also known as adipose triglyceride lipase (ATGL). Members of this family share a patain domain, initially discovered in potato tubers. ATGL is expressed in white and brown adipose tissue in high mRNA levels. Mutations in PNPLA2 encoding adipose triglyceride lipase (ATGL) leads to neutral lipid storage disease (NLSD) which is characterized by the accumulation of triglycerides in multiple tissues. ATGL mutations are also commonly associated with severe forms of skeletal- and cardio-myopathy. This family includes patatin-like proteins: TTS-2.2 (transport-secretion protein 2.2), PNPLA2 (Patatin-like phospholipase domain-containing protein 2), and iPLA2-zeta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=51.84 E-value=37 Score=22.64 Aligned_cols=22 Identities=9% Similarity=0.022 Sum_probs=18.5
Q ss_pred CeeEEEEchhHHHHHHHHHhCc
Q psy1324 60 RCILIGRDFGGSLVWSFLDKYP 81 (115)
Q Consensus 60 ~~~lvg~S~Gg~~a~~~~~~~~ 81 (115)
.-.+.|-|.|+..+..++...+
T Consensus 37 ~~~i~G~SAGAl~aa~~a~g~~ 58 (249)
T cd07220 37 ARKIYGASAGALTATALVTGVC 58 (249)
T ss_pred CCeEEEEcHHHHHHHHHHcCCC
Confidence 3568999999999999988764
No 278
>PF14253 AbiH: Bacteriophage abortive infection AbiH
Probab=50.70 E-value=17 Score=24.01 Aligned_cols=14 Identities=21% Similarity=0.470 Sum_probs=11.9
Q ss_pred CCCeeEEEEchhHH
Q psy1324 58 RNRCILIGRDFGGS 71 (115)
Q Consensus 58 ~~~~~lvg~S~Gg~ 71 (115)
...+++.|||+|-.
T Consensus 234 i~~I~i~GhSl~~~ 247 (270)
T PF14253_consen 234 IDEIIIYGHSLGEV 247 (270)
T ss_pred CCEEEEEeCCCchh
Confidence 46899999999965
No 279
>cd07221 Pat_PNPLA3 Patatin-like phospholipase domain containing protein 3. PNPLA3 is a triacylglycerol lipase that mediates triacylglycerol hydrolysis in adipocytes and is an indicator of the nutritional state. PNPLA3 is also known as adiponutrin (ADPN) or iPLA2-epsilon. Human adiponutrins are bound to the cell membrane of adipocytes and show transacylase, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: ADPN (adiponutrin) from mammals, PNPLA3 (Patatin-like phospholipase domain-containing protein 3), and iPLA2-epsilon (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=50.61 E-value=43 Score=22.33 Aligned_cols=22 Identities=23% Similarity=0.409 Sum_probs=18.6
Q ss_pred CeeEEEEchhHHHHHHHHHhCc
Q psy1324 60 RCILIGRDFGGSLVWSFLDKYP 81 (115)
Q Consensus 60 ~~~lvg~S~Gg~~a~~~~~~~~ 81 (115)
.-.++|-|.|+..+..++...+
T Consensus 33 ~~~i~GtSAGAl~aa~~asg~~ 54 (252)
T cd07221 33 ARMFFGASAGALHCVTFLSGLP 54 (252)
T ss_pred CCEEEEEcHHHHHHHHHHhCCC
Confidence 3468999999999999988765
No 280
>PF06838 Met_gamma_lyase: Methionine gamma-lyase ; InterPro: IPR009651 This family represents the aluminium resistance protein, which confers resistance to aluminium in bacteria [].; PDB: 3JZL_A 3I16_C 3GWP_A 3FD0_B 3HT4_F.
Probab=48.62 E-value=1e+02 Score=22.27 Aligned_cols=61 Identities=8% Similarity=0.129 Sum_probs=37.2
Q ss_pred CHhhHHHHHHhhhCCceEEEecCCCCCCCccchh--hHHHHHHHHHHHhCCCCeeEEEEchhHH
Q psy1324 10 SWYIWKHQMSEFSHEYWTVAVDIKTNFRTIADRY--FLVDSLKVFLDHLGRNRCILIGRDFGGS 71 (115)
Q Consensus 10 ~~~~~~~~~~~l~~~~~v~~~d~~g~g~s~~~~~--~~~~~~~~~~~~~~~~~~~lvg~S~Gg~ 71 (115)
..-+|+.+.+.+.+.-+++.+. |..|++....+ +..+.+..+++....+-+++|=.|+|=+
T Consensus 140 g~~D~~~i~~~~~~~tk~v~IQ-RSrGYs~R~sl~i~~I~~~i~~vk~~~p~~iifVDNCYGEF 202 (403)
T PF06838_consen 140 GTIDWEAIKKALKPNTKMVLIQ-RSRGYSWRPSLTIEEIKEIIKFVKEINPDVIIFVDNCYGEF 202 (403)
T ss_dssp SSB-HHHHHHHHHTTEEEEEEE--S-TTSSS----HHHHHHHHHHHHHH-TTSEEEEE-TTTTT
T ss_pred CCcCHHHHHHhhccCceEEEEe-cCCCCCCCCCCCHHHHHHHHHHHHhhCCCeEEEEeCCccee
Confidence 3456888888888777777774 44555522223 6677777777777766777788888854
No 281
>PF08484 Methyltransf_14: C-methyltransferase C-terminal domain; InterPro: IPR013691 This domain is found in bacterial C-methyltransferase proteins, often together with other methyltransferase domains such as IPR013216 from INTERPRO or IPR013217 from INTERPRO. ; PDB: 4E2X_A 3NDJ_A 3NDI_A 4E32_A 4E33_A 4E31_A 4E2Y_A 4E2W_A 4E2Z_A 4E30_A.
Probab=47.95 E-value=65 Score=19.89 Aligned_cols=43 Identities=19% Similarity=0.290 Sum_probs=22.5
Q ss_pred HHHHHHHHHHh--CCCCeeEEEEchhHHHHHHHHHhCcccccceE
Q psy1324 46 VDSLKVFLDHL--GRNRCILIGRDFGGSLVWSFLDKYPELVVKSI 88 (115)
Q Consensus 46 ~~~~~~~~~~~--~~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v 88 (115)
.+.+.++++.+ ..+++.++|-|..|...+.++...++.+..++
T Consensus 54 ~~~l~~~L~~~~~~gk~I~~yGA~~kg~tlln~~g~~~~~I~~vv 98 (160)
T PF08484_consen 54 KAELREFLEKLKAEGKRIAGYGAGAKGNTLLNYFGLDNDLIDYVV 98 (160)
T ss_dssp HHHHHHHHHHHHHTT--EEEE---SHHHHHHHHHT--TTTS--EE
T ss_pred HHHHHHHHHHHHHcCCEEEEECcchHHHHHHHHhCCCcceeEEEE
Confidence 33444444433 34789999999999998888877666555554
No 282
>COG0541 Ffh Signal recognition particle GTPase [Intracellular trafficking and secretion]
Probab=47.88 E-value=1.1e+02 Score=22.51 Aligned_cols=69 Identities=17% Similarity=0.191 Sum_probs=47.6
Q ss_pred HhhhC-CceEEEecCCCCCCCccchhhHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhCccc--ccceEEe
Q psy1324 19 SEFSH-EYWTVAVDIKTNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPEL--VVKSIII 90 (115)
Q Consensus 19 ~~l~~-~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~~~--v~~~v~~ 90 (115)
+.+.. ++.++.+|-.|.-.-.. ++.+.+.++-+.+....+.+|--++=|+-|...|...-+. +.++|+.
T Consensus 176 ~~ak~~~~DvvIvDTAGRl~ide---~Lm~El~~Ik~~~~P~E~llVvDam~GQdA~~~A~aF~e~l~itGvIlT 247 (451)
T COG0541 176 EKAKEEGYDVVIVDTAGRLHIDE---ELMDELKEIKEVINPDETLLVVDAMIGQDAVNTAKAFNEALGITGVILT 247 (451)
T ss_pred HHHHHcCCCEEEEeCCCcccccH---HHHHHHHHHHhhcCCCeEEEEEecccchHHHHHHHHHhhhcCCceEEEE
Confidence 34443 78999999887632211 5666677776677667788888888888888888876554 6666654
No 283
>PRK05665 amidotransferase; Provisional
Probab=47.16 E-value=44 Score=22.09 Aligned_cols=34 Identities=29% Similarity=0.344 Sum_probs=25.3
Q ss_pred hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHH
Q psy1324 44 FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFL 77 (115)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~ 77 (115)
.|...+.++++..-....-++|.|+|.++....+
T Consensus 75 pwi~~l~~~i~~~~~~~~PilGIC~GhQlla~Al 108 (240)
T PRK05665 75 PWIQTLKTYLLKLYERGDKLLGVCFGHQLLALLL 108 (240)
T ss_pred hHHHHHHHHHHHHHhcCCCEEEEeHHHHHHHHHh
Confidence 6677777777765334556999999998877766
No 284
>COG3727 Vsr DNA G:T-mismatch repair endonuclease [DNA replication, recombination, and repair]
Probab=45.51 E-value=33 Score=20.76 Aligned_cols=8 Identities=38% Similarity=0.883 Sum_probs=5.6
Q ss_pred CEeecCCC
Q psy1324 1 MLFLHGFP 8 (115)
Q Consensus 1 vl~~hG~~ 8 (115)
+||+||..
T Consensus 60 viFvHGCF 67 (150)
T COG3727 60 VIFVHGCF 67 (150)
T ss_pred EEEEeeee
Confidence 47888864
No 285
>PRK09444 pntB pyridine nucleotide transhydrogenase; Provisional
Probab=42.14 E-value=78 Score=23.34 Aligned_cols=63 Identities=10% Similarity=0.163 Sum_probs=36.3
Q ss_pred CEeecCCCCC----HhhHHHHHHhhhC-CceEEE-e-----cCCCCCCC--ccch--hhHHHHHHHHHHHhCCCCeeE
Q psy1324 1 MLFLHGFPES----WYIWKHQMSEFSH-EYWTVA-V-----DIKTNFRT--IADR--YFLVDSLKVFLDHLGRNRCIL 63 (115)
Q Consensus 1 vl~~hG~~~~----~~~~~~~~~~l~~-~~~v~~-~-----d~~g~g~s--~~~~--~~~~~~~~~~~~~~~~~~~~l 63 (115)
||.++||+.- ...-+++.+.|.+ +-+|-. + -+|||-.- .+.+ |+.+.+.+++-+.+...++.+
T Consensus 309 ViIVPGYGmAVAqAQh~v~el~~~L~~~Gv~V~faIHPVAGRMPGHMNVLLAEA~VPYd~v~eMdeIN~~F~~tDval 386 (462)
T PRK09444 309 VIITPGYGMAVAQAQYPVAEITEKLRARGINVRFGIHPVAGRLPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDTVL 386 (462)
T ss_pred EEEECChHHHHHHHHHHHHHHHHHHHHCCCeEEEEeccccccCCCcceeEEeecCCCHHHHHhHHhhccccccCCEEE
Confidence 5789999753 3345566666754 544433 2 35555322 2222 477777777777776555554
No 286
>PF10561 UPF0565: Uncharacterised protein family UPF0565; InterPro: IPR018881 This family of proteins has no known function.
Probab=42.02 E-value=38 Score=23.42 Aligned_cols=37 Identities=16% Similarity=0.126 Sum_probs=27.2
Q ss_pred CCeeEEEEchhHHHHHHHHHhCc----------------ccccceEEecCCCC
Q psy1324 59 NRCILIGRDFGGSLVWSFLDKYP----------------ELVVKSIIINVPHP 95 (115)
Q Consensus 59 ~~~~lvg~S~Gg~~a~~~~~~~~----------------~~v~~~v~~~~~~~ 95 (115)
.+++|+|+|-|+.+.-.++.+.. .+|+.+-.+++.+.
T Consensus 193 ~~~~LiGFSKGcvVLNqll~El~~~~~~~~~~~~~~~~l~~I~~~~wLD~Gh~ 245 (303)
T PF10561_consen 193 PPLTLIGFSKGCVVLNQLLYELHYLEELARVDKEIERFLSRISDMYWLDGGHN 245 (303)
T ss_pred CceEEEEecCcchHHHHHHHHHHhhhcccCCchHHHHHHHhhheEEEeccCCC
Confidence 37899999999998766665543 24777777887665
No 287
>PF01734 Patatin: Patatin-like phospholipase This Prosite family is a subset of the Pfam family; InterPro: IPR002641 This domain is structurally and functionally related to the animal cytosolic phospholipase A2. This domain is found in the patatin glycoproteins from the total soluble protein in potato tubers []. Patatin is a storage protein but it also has the enzymatic activity of lipid acyl hydrolase, catalysing the cleavage of fatty acids from membrane lipids [].; GO: 0006629 lipid metabolic process; PDB: 3TU3_B 4AKX_B 1OXW_A.
Probab=40.38 E-value=34 Score=20.57 Aligned_cols=22 Identities=14% Similarity=0.040 Sum_probs=16.8
Q ss_pred CCeeEEEEchhHHHHHHHHHhC
Q psy1324 59 NRCILIGRDFGGSLVWSFLDKY 80 (115)
Q Consensus 59 ~~~~lvg~S~Gg~~a~~~~~~~ 80 (115)
..-.+.|-|.||.++..++...
T Consensus 27 ~~d~i~GtS~Gal~a~~~~~~~ 48 (204)
T PF01734_consen 27 RFDVISGTSAGALNAALLALGY 48 (204)
T ss_dssp T-SEEEEECCHHHHHHHHHTC-
T ss_pred CccEEEEcChhhhhHHHHHhCC
Confidence 4456899999999998877773
No 288
>cd07222 Pat_PNPLA4 Patatin-like phospholipase domain containing protein 4. PNPLA4, also known as GS2 (gene sequence-2), shows both lipase and transacylation activities. GS2 lipase is expressed in various tissues, predominantly in muscle and adipocytes tissue. It is also expressed in keratinocytes and shows retinyl ester hydrolase, acylglycerol, TG hydrolase, and PLA2 activity. This family includes patatin-like proteins: GS2 from mammals, PNPLA4 (Patatin-like phospholipase domain-containing protein 4), and iPLA2-eta (Calcium-independent phospholipase A2) from Homo sapiens.
Probab=40.11 E-value=64 Score=21.33 Aligned_cols=17 Identities=18% Similarity=0.221 Sum_probs=15.5
Q ss_pred eEEEEchhHHHHHHHHH
Q psy1324 62 ILIGRDFGGSLVWSFLD 78 (115)
Q Consensus 62 ~lvg~S~Gg~~a~~~~~ 78 (115)
.+.|-|+|+.++..++.
T Consensus 34 ~i~GtSaGAl~aa~~a~ 50 (246)
T cd07222 34 RFAGASAGSLVAAVLLT 50 (246)
T ss_pred EEEEECHHHHHHHHHhc
Confidence 78999999999999984
No 289
>KOG2730|consensus
Probab=39.71 E-value=70 Score=21.39 Aligned_cols=39 Identities=10% Similarity=-0.110 Sum_probs=26.9
Q ss_pred hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhCcc
Q psy1324 44 FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPE 82 (115)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~~ 82 (115)
..+..+..........++++..++-||.-+..++.+.|.
T Consensus 80 ~ia~~iA~~v~~~~~~~~iidaf~g~gGntiqfa~~~~~ 118 (263)
T KOG2730|consen 80 KIAEHIANRVVACMNAEVIVDAFCGVGGNTIQFALQGPY 118 (263)
T ss_pred HHHHHHHHHHHHhcCcchhhhhhhcCCchHHHHHHhCCe
Confidence 345555554444445677888888888888888888765
No 290
>PRK14194 bifunctional 5,10-methylene-tetrahydrofolate dehydrogenase/ 5,10-methylene-tetrahydrofolate cyclohydrolase; Provisional
Probab=39.39 E-value=63 Score=22.34 Aligned_cols=36 Identities=17% Similarity=0.253 Sum_probs=28.3
Q ss_pred HHHHHHHHHHHhCC----CCeeEEEEc--hhHHHHHHHHHhC
Q psy1324 45 LVDSLKVFLDHLGR----NRCILIGRD--FGGSLVWSFLDKY 80 (115)
Q Consensus 45 ~~~~~~~~~~~~~~----~~~~lvg~S--~Gg~~a~~~~~~~ 80 (115)
-...+.+++++.+. +++.++|.| ||..++..+..+.
T Consensus 142 Tp~aii~lL~~~~i~l~Gk~V~vIG~s~ivG~PmA~~L~~~g 183 (301)
T PRK14194 142 TPSGCLRLLEDTCGDLTGKHAVVIGRSNIVGKPMAALLLQAH 183 (301)
T ss_pred cHHHHHHHHHHhCCCCCCCEEEEECCCCccHHHHHHHHHHCC
Confidence 36677888887753 689999986 9999999997663
No 291
>PF00484 Pro_CA: Carbonic anhydrase; InterPro: IPR001765 Carbonic anhydrases (4.2.1.1 from EC) (CA) are zinc metalloenzymes which catalyze the reversible hydration of carbon dioxide. In Escherichia coli, CA (gene cynT) is involved in recycling carbon dioxide formed in the bicarbonate-dependent decomposition of cyanate by cyanase (gene cynS). By this action, it prevents the depletion of cellular bicarbonate []. In photosynthetic bacteria and plant chloroplast, CA is essential to inorganic carbon fixation []. Prokaryotic and plant chloroplast CA are structurally and evolutionary related and form a family distinct from the one which groups the many different forms of eukaryotic CA's (see IPR001148 from INTERPRO). Hypothetical proteins yadF from Escherichia coli and HI1301 from Haemophilus influenzae also belong to this family. This family also includes, YbcF and related proteins, which are inactive homologues of bacterial carbonic anhydrase.; GO: 0004089 carbonate dehydratase activity, 0008270 zinc ion binding; PDB: 1DDZ_B 3LAS_A 2W3N_A 2W3Q_A 1G5C_F 3E2A_A 3E2X_B 2A8C_A 2A8D_D 3E3F_A ....
Probab=38.68 E-value=46 Score=19.97 Aligned_cols=33 Identities=24% Similarity=0.293 Sum_probs=22.7
Q ss_pred hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHH
Q psy1324 44 FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSF 76 (115)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~ 76 (115)
.....+.-.+..++.+.++++||+-=|.+...+
T Consensus 40 ~~~~sle~av~~l~v~~IiV~gHt~CGa~~~~~ 72 (153)
T PF00484_consen 40 SALASLEYAVYHLGVKEIIVCGHTDCGAIKAAL 72 (153)
T ss_dssp HHHHHHHHHHHTST-SEEEEEEETT-HHHHHHH
T ss_pred chhhheeeeeecCCCCEEEEEcCCCchHHHHHH
Confidence 445556666677888999999999877776443
No 292
>PRK06731 flhF flagellar biosynthesis regulator FlhF; Validated
Probab=38.63 E-value=1.2e+02 Score=20.47 Aligned_cols=75 Identities=5% Similarity=0.068 Sum_probs=44.8
Q ss_pred HHHHHHhhhC--CceEEEecCCCCCCCccchhhHHHHHHHHHHHhCCCCeeE-EEEchhHHHHHHHHHhCc-ccccceEE
Q psy1324 14 WKHQMSEFSH--EYWTVAVDIKTNFRTIADRYFLVDSLKVFLDHLGRNRCIL-IGRDFGGSLVWSFLDKYP-ELVVKSII 89 (115)
Q Consensus 14 ~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~l-vg~S~Gg~~a~~~~~~~~-~~v~~~v~ 89 (115)
.....+.+.+ ++.++.+|-+|...... ...+.+.++++......+++ +.-++++.-+...+..+. -.+.++|+
T Consensus 142 l~~~l~~l~~~~~~D~ViIDt~Gr~~~~~---~~l~el~~~~~~~~~~~~~LVl~a~~~~~d~~~~~~~f~~~~~~~~I~ 218 (270)
T PRK06731 142 MTRALTYFKEEARVDYILIDTAGKNYRAS---ETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHIDGIVF 218 (270)
T ss_pred HHHHHHHHHhcCCCCEEEEECCCCCcCCH---HHHHHHHHHHhhhCCCeEEEEEcCccCHHHHHHHHHHhCCCCCCEEEE
Confidence 3444444543 79999999998854311 34555555555544334444 445667777777777753 34777776
Q ss_pred ec
Q psy1324 90 IN 91 (115)
Q Consensus 90 ~~ 91 (115)
.-
T Consensus 219 TK 220 (270)
T PRK06731 219 TK 220 (270)
T ss_pred Ee
Confidence 54
No 293
>COG1282 PntB NAD/NADP transhydrogenase beta subunit [Energy production and conversion]
Probab=38.61 E-value=1.1e+02 Score=22.04 Aligned_cols=63 Identities=8% Similarity=0.110 Sum_probs=35.7
Q ss_pred CEeecCCCCC----HhhHHHHHHhhhC-CceEEEe------cCCCCCCC--ccch--hhHHHHHHHHHHHhCCCCeeE
Q psy1324 1 MLFLHGFPES----WYIWKHQMSEFSH-EYWTVAV------DIKTNFRT--IADR--YFLVDSLKVFLDHLGRNRCIL 63 (115)
Q Consensus 1 vl~~hG~~~~----~~~~~~~~~~l~~-~~~v~~~------d~~g~g~s--~~~~--~~~~~~~~~~~~~~~~~~~~l 63 (115)
||.++||+.- ...-+++.+.|++ +.+|-.- .+|||-.- .+.. |+..-+++++-+++....+++
T Consensus 311 VIIvPGYGmAVAQAQh~v~E~~~~L~~~Gv~VrfaIHPVAGRmPGHMNVLLAEA~VpYd~v~emddIN~dF~~tDVvl 388 (463)
T COG1282 311 VIIVPGYGMAVAQAQHPVAEITEKLRARGVNVRFAIHPVAGRMPGHMNVLLAEAKVPYDIVLEMDEINDDFADTDVVL 388 (463)
T ss_pred EEEecCchHHHHhhhhHHHHHHHHHHhcCCeeeEeecccccCCCcchhhhhhhccCCHHHHhhHHhhcchhccccEEE
Confidence 5778899753 3445566677754 5444332 24454322 1111 466777777777776655554
No 294
>KOG1411|consensus
Probab=38.03 E-value=36 Score=24.26 Aligned_cols=33 Identities=12% Similarity=0.234 Sum_probs=18.3
Q ss_pred CEeecCCCCC-------HhhHHHHHHhhhCCceEEEecCC
Q psy1324 1 MLFLHGFPES-------WYIWKHQMSEFSHEYWTVAVDIK 33 (115)
Q Consensus 1 vl~~hG~~~~-------~~~~~~~~~~l~~~~~v~~~d~~ 33 (115)
+|++|+...+ .+.|+.+.+.+.+.-.+-.+|+.
T Consensus 200 ~ilLhaCaHNPTGvDPt~eqw~ki~~~~~~k~~~pffDmA 239 (427)
T KOG1411|consen 200 IILLHACAHNPTGVDPTKEQWEKISDLIKEKNLLPFFDMA 239 (427)
T ss_pred EEEeehhhcCCCCCCccHHHHHHHHHHhhhccccchhhhh
Confidence 3677766543 34787777766553333334443
No 295
>PRK14974 cell division protein FtsY; Provisional
Probab=36.63 E-value=1.5e+02 Score=20.83 Aligned_cols=66 Identities=18% Similarity=0.176 Sum_probs=39.4
Q ss_pred CCceEEEecCCCCCCCccchhhHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhCc--ccccceEEec
Q psy1324 23 HEYWTVAVDIKTNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYP--ELVVKSIIIN 91 (115)
Q Consensus 23 ~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~--~~v~~~v~~~ 91 (115)
.++.++.+|-+|...... ...+.+..+.+......+++|.-+.-|.-+...+..+. -.+.++|+.-
T Consensus 221 ~~~DvVLIDTaGr~~~~~---~lm~eL~~i~~~~~pd~~iLVl~a~~g~d~~~~a~~f~~~~~~~giIlTK 288 (336)
T PRK14974 221 RGIDVVLIDTAGRMHTDA---NLMDELKKIVRVTKPDLVIFVGDALAGNDAVEQAREFNEAVGIDGVILTK 288 (336)
T ss_pred CCCCEEEEECCCccCCcH---HHHHHHHHHHHhhCCceEEEeeccccchhHHHHHHHHHhcCCCCEEEEee
Confidence 478999999998765422 34555555555554455566665555665555555432 2466666544
No 296
>COG2201 CheB Chemotaxis response regulator containing a CheY-like receiver domain and a methylesterase domain [Cell motility and secretion / Signal transduction mechanisms]
Probab=36.25 E-value=1.4e+02 Score=21.29 Aligned_cols=32 Identities=19% Similarity=0.309 Sum_probs=23.7
Q ss_pred CeeEEEEchhHHHHHHHHHh-Cccccc-ceEEec
Q psy1324 60 RCILIGRDFGGSLVWSFLDK-YPELVV-KSIIIN 91 (115)
Q Consensus 60 ~~~lvg~S~Gg~~a~~~~~~-~~~~v~-~~v~~~ 91 (115)
+++++|-|-||.-++..... .|..+. .+++.-
T Consensus 158 ~iV~IGaStGGp~AL~~il~~lP~~~p~pvvIvQ 191 (350)
T COG2201 158 KIVAIGASTGGPAALRAVLPALPADFPAPVVIVQ 191 (350)
T ss_pred cEEEEEeCCCCHHHHHHHHHhCCCCCCCCEEEEe
Confidence 57889999999998876665 577777 444433
No 297
>PF02633 Creatininase: Creatinine amidohydrolase; InterPro: IPR003785 This family includes the enzymes creatininase and 2-amino-5-formylamino-6-ribosylaminopyrimidin-4(3H)-one 5'-monophosphate deformylase, also known as formamide hydrolase. Creatinase or creatinine amidohydrolase (3.5.2.10 from EC) catalyses the hydrolysis of creatinine to creatine, which can then be metabolised to urea and sarcosine by creatinase (3.5.3.3 from EC). Creatininase is a member of the urease-related amidohydrolase superfamily []. Formamide hydrolase catalyzes the hydrolysis of the formamide of 2-amino-5-formylamino-6-ribosylamino-4(3H)-pyrimidinone 5'-monophosphate (FAPy) to form 2,5-diamino-6-ribosylamino-4(3H)-pyrimidinone 5'-phosphate (APy) (3.5.1.102 from EC). ; PDB: 3A6K_F 3A6F_A 3A6D_B 1J2U_B 3A6J_C 1J2T_A 3A6G_C 3A6H_F 1Q3K_E 3A6L_C ....
Probab=36.13 E-value=1.2e+02 Score=19.73 Aligned_cols=36 Identities=14% Similarity=0.145 Sum_probs=21.5
Q ss_pred hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHh
Q psy1324 44 FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDK 79 (115)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~ 79 (115)
.++.++.+.+.+.|+++++++..-.|=.-++..+.+
T Consensus 86 ~~l~di~~sl~~~Gf~~ivivngHgGN~~~l~~~~~ 121 (237)
T PF02633_consen 86 ALLRDILRSLARHGFRRIVIVNGHGGNIAALEAAAR 121 (237)
T ss_dssp HHHHHHHHHHHHHT--EEEEEESSTTHHHHHHHHHH
T ss_pred HHHHHHHHHHHHcCCCEEEEEECCHhHHHHHHHHHH
Confidence 777777777778899998887754443323333333
No 298
>cd07213 Pat17_PNPLA8_PNPLA9_like1 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=35.49 E-value=40 Score=22.75 Aligned_cols=19 Identities=16% Similarity=0.345 Sum_probs=16.8
Q ss_pred eEEEEchhHHHHHHHHHhC
Q psy1324 62 ILIGRDFGGSLVWSFLDKY 80 (115)
Q Consensus 62 ~lvg~S~Gg~~a~~~~~~~ 80 (115)
.+.|-|.||.++..++...
T Consensus 37 ~i~GTSaGaiia~~la~g~ 55 (288)
T cd07213 37 LFAGTSAGSLIALGLALGY 55 (288)
T ss_pred EEEEeCHHHHHHHHHHcCc
Confidence 5799999999999998765
No 299
>PRK05368 homoserine O-succinyltransferase; Provisional
Probab=35.02 E-value=59 Score=22.46 Aligned_cols=31 Identities=3% Similarity=-0.088 Sum_probs=21.5
Q ss_pred HHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHh
Q psy1324 46 VDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDK 79 (115)
Q Consensus 46 ~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~ 79 (115)
...+.+++++ ...-++|.|+|+++++.++..
T Consensus 124 l~~i~~w~~~---~~~s~LgICwGaQa~a~algG 154 (302)
T PRK05368 124 LKEILDWAKT---HVTSTLFICWAAQAALYHLYG 154 (302)
T ss_pred HHHHHHHHHH---cCCCEEEEcHHHHHHHHHcCC
Confidence 3344444443 356889999999999887766
No 300
>TIGR01425 SRP54_euk signal recognition particle protein SRP54. This model represents examples from the eukaryotic cytosol of the signal recognition particle protein component, SRP54. This GTP-binding protein is a component of the eukaryotic signal recognition particle, along with several other protein subunits and a 7S RNA. Some species, including Arabidopsis, have several closely related forms. The extreme C-terminal region is glycine-rich and lower in complexity, poorly conserved between species, and excluded from this model.
Probab=33.64 E-value=1.9e+02 Score=21.16 Aligned_cols=65 Identities=14% Similarity=0.157 Sum_probs=37.4
Q ss_pred CCceEEEecCCCCCCCccchhhHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhCcc--cccceEEe
Q psy1324 23 HEYWTVAVDIKTNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPE--LVVKSIII 90 (115)
Q Consensus 23 ~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~~--~v~~~v~~ 90 (115)
.++.++.+|-+|.... .. .+.+.+..+.+......+.+|--++-|.-+...+..+.+ .+.++|+.
T Consensus 181 ~~~DvViIDTaGr~~~-d~--~lm~El~~i~~~~~p~e~lLVlda~~Gq~a~~~a~~F~~~~~~~g~IlT 247 (429)
T TIGR01425 181 ENFDIIIVDTSGRHKQ-ED--SLFEEMLQVAEAIQPDNIIFVMDGSIGQAAEAQAKAFKDSVDVGSVIIT 247 (429)
T ss_pred CCCCEEEEECCCCCcc-hH--HHHHHHHHHhhhcCCcEEEEEeccccChhHHHHHHHHHhccCCcEEEEE
Confidence 3899999999986433 11 344555555555444556666656656555555555432 35555543
No 301
>PRK09936 hypothetical protein; Provisional
Probab=31.66 E-value=1.8e+02 Score=20.22 Aligned_cols=29 Identities=14% Similarity=0.090 Sum_probs=25.1
Q ss_pred CHhhHHHHHHhhhC-CceEEEecCCCCCCC
Q psy1324 10 SWYIWKHQMSEFSH-EYWTVAVDIKTNFRT 38 (115)
Q Consensus 10 ~~~~~~~~~~~l~~-~~~v~~~d~~g~g~s 38 (115)
+...|+.+.+.+.. |++.+.+.+.++|.+
T Consensus 36 ~~~qWq~~~~~~~~~G~~tLivQWt~yG~~ 65 (296)
T PRK09936 36 TDTQWQGLWSQLRLQGFDTLVVQWTRYGDA 65 (296)
T ss_pred CHHHHHHHHHHHHHcCCcEEEEEeeeccCC
Confidence 46679999998876 999999999999876
No 302
>TIGR03607 patatin-related protein. This bacterial protein family contains an N-terminal patatin domain, where patatins are plant storage proteins capable of phospholipase activity (see pfam01734). Regions of strong sequence conservation are separated by regions of significant sequence and length variability. Members of the family are distributed sporadically among bacteria. The function is unknown.
Probab=31.60 E-value=82 Score=24.77 Aligned_cols=22 Identities=14% Similarity=-0.010 Sum_probs=17.7
Q ss_pred CCCCeeEEEEchhHHHHHHHHH
Q psy1324 57 GRNRCILIGRDFGGSLVWSFLD 78 (115)
Q Consensus 57 ~~~~~~lvg~S~Gg~~a~~~~~ 78 (115)
+..--.+.|.|+||.++..++.
T Consensus 64 ~~~~d~iaGTSAGAInaa~lA~ 85 (739)
T TIGR03607 64 RVRVDVISGTSAGGINGVLLAY 85 (739)
T ss_pred CCCCceEEeeCHHHHHHHHHHc
Confidence 3445578999999999888886
No 303
>PF07643 DUF1598: Protein of unknown function (DUF1598); InterPro: IPR011487 This is a family of Rhodopirellula baltica hypothetical proteins of about 500 amino acids in length.
Probab=31.59 E-value=97 Score=17.11 Aligned_cols=32 Identities=9% Similarity=0.141 Sum_probs=26.2
Q ss_pred HHHHHHHHhCCCCeeEEEEchhHHHHHHHHHh
Q psy1324 48 SLKVFLDHLGRNRCILIGRDFGGSLVWSFLDK 79 (115)
Q Consensus 48 ~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~ 79 (115)
.+..+.+.+|.+.+.+.|.+....+|.-+..-
T Consensus 32 ~~~~l~~~LG~QdV~V~Gip~~sh~ArvLVeA 63 (84)
T PF07643_consen 32 WVDGLRQALGPQDVTVYGIPADSHFARVLVEA 63 (84)
T ss_pred HHHHHHHHhCCceeEEEccCCccHHHHHHHHh
Confidence 45555667899999999999999999887665
No 304
>TIGR02813 omega_3_PfaA polyketide-type polyunsaturated fatty acid synthase PfaA. Members of the seed for this alignment are involved in omega-3 polyunsaturated fatty acid biosynthesis, such as the protein PfaA from the eicosapentaenoic acid biosynthesis operon in Photobacterium profundum strain SS9. PfaA is encoded together with PfaB, PfaC, and PfaD, and the functions of the individual polypeptides have not yet been described. More distant homologs of PfaA, also included with the reach of this model, appear to be involved in polyketide-like biosynthetic mechanisms of polyunsaturated fatty acid biosynthesis, an alternative to the more familiar iterated mechanism of chain extension and desaturation, and in most cases are encoded near genes for homologs of PfaB, PfaC, and/or PfaD.
Probab=31.55 E-value=61 Score=29.31 Aligned_cols=28 Identities=14% Similarity=0.160 Sum_probs=21.6
Q ss_pred HHHHHHhCCCCeeEEEEchhHHHHHHHH
Q psy1324 50 KVFLDHLGRNRCILIGRDFGGSLVWSFL 77 (115)
Q Consensus 50 ~~~~~~~~~~~~~lvg~S~Gg~~a~~~~ 77 (115)
.++++..|.++-.++|||+|=+.++..+
T Consensus 665 ~~lL~~~Gi~Pd~v~GHSlGE~aAa~aA 692 (2582)
T TIGR02813 665 YKLFTQAGFKADMTAGHSFGELSALCAA 692 (2582)
T ss_pred HHHHHHcCCccceeecCCHHHHHHHHHh
Confidence 4555677888889999999987766654
No 305
>COG3621 Patatin [General function prediction only]
Probab=31.51 E-value=1e+02 Score=21.92 Aligned_cols=52 Identities=13% Similarity=0.098 Sum_probs=33.1
Q ss_pred CceEEEecCCCCCCCccchhhHHHHHHHHHHHhCC----CCeeE-EEEchhHHHHHHHHHhCc
Q psy1324 24 EYWTVAVDIKTNFRTIADRYFLVDSLKVFLDHLGR----NRCIL-IGRDFGGSLVWSFLDKYP 81 (115)
Q Consensus 24 ~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~----~~~~l-vg~S~Gg~~a~~~~~~~~ 81 (115)
.+++...|--|.-. ....++...+++... +.+.+ -|.|.||.+++.++...+
T Consensus 8 k~rIlsldGGGvrG------~i~lE~lr~ieqiqGkkl~e~FDl~~GTSiGgilal~La~~ks 64 (394)
T COG3621 8 KYRILSLDGGGVRG------AILLEKLRIIEQIQGKKLCEYFDLIGGTSIGGILALGLALGKS 64 (394)
T ss_pred ceeEEEecCCcccc------HHHHHHHHHHHHHhCCcceeeEeeecCccHHHHHHHHHhcCCC
Confidence 46666666443311 345556666666432 34555 779999999999988764
No 306
>PF03575 Peptidase_S51: Peptidase family S51; InterPro: IPR005320 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Proteolytic enzymes that exploit serine in their catalytic activity are ubiquitous, being found in viruses, bacteria and eukaryotes []. They include a wide range of peptidase activity, including exopeptidase, endopeptidase, oligopeptidase and omega-peptidase activity. Over 20 families (denoted S1 - S66) of serine protease have been identified, these being grouped into clans on the basis of structural similarity and other functional evidence []. Structures are known for members of the clans and the structures indicate that some appear to be totally unrelated, suggesting different evolutionary origins for the serine peptidases []. Not withstanding their different evolutionary origins, there are similarities in the reaction mechanisms of several peptidases. Chymotrypsin, subtilisin and carboxypeptidase C have a catalytic triad of serine, aspartate and histidine in common: serine acts as a nucleophile, aspartate as an electrophile, and histidine as a base []. The geometric orientations of the catalytic residues are similar between families, despite different protein folds []. The linear arrangements of the catalytic residues commonly reflect clan relationships. For example the catalytic triad in the chymotrypsin clan (PA) is ordered HDS, but is ordered DHS in the subtilisin clan (SB) and SDH in the carboxypeptidase clan (SC) [, ]. This group of serine peptidases belong to MEROPS peptidase family S51 (clan PC(S)). The type example being dipeptidase E (alpha-aspartyl dipeptidase) from Escherichia coli. The family contains alpha-aspartyl dipeptidases (dipeptidase E) and cyanophycinases. The three-dimensional structure of Salmonella typhimurium aspartyl dipeptidase, peptidase E has been determine at 1.2-A resolution. The structure of this 25kDa enzyme consists of two mixed beta-sheets forming a V, flanked by six alpha-helices. The active site contains a Ser-His-Glu catalytic triad and is the first example of a serine peptidase/protease with a glutamate in the catalytic triad. The active site Ser is located on a strand-helix motif reminiscent of that found in alpha/beta-hydrolases, but the polypeptide fold and the organisation of the catalytic triad differ from those of the known serine proteases. This enzyme appears to represent a new example of convergent evolution of peptidase activity []. Alpha-aspartyl dipeptidase hydrolyses dipeptides containing N-terminal aspartate residues, asp-|-xaa. It does not act on peptides with N-terminal Glu, Asn or Gln, nor does it cleave isoaspartyl peptides. In the cyanobacteria, cyanophycinase is an exopeptidase that catalyses the hydrolytic cleavage of multi-l-arginyl-poly-l-aspartic acid (cyanophycin; a water- insoluble reserve polymer) into aspartate-arginine dipeptides.; GO: 0008236 serine-type peptidase activity, 0006508 proteolysis; PDB: 3EN0_B 1FYE_A 1FY2_A 3L4E_A.
Probab=31.36 E-value=31 Score=20.83 Aligned_cols=14 Identities=21% Similarity=0.520 Sum_probs=12.0
Q ss_pred CeeEEEEchhHHHH
Q psy1324 60 RCILIGRDFGGSLV 73 (115)
Q Consensus 60 ~~~lvg~S~Gg~~a 73 (115)
-..++|.|.|+++.
T Consensus 69 G~vi~G~SAGA~i~ 82 (154)
T PF03575_consen 69 GGVIIGTSAGAMIL 82 (154)
T ss_dssp TSEEEEETHHHHCT
T ss_pred CCEEEEEChHHhhc
Confidence 37899999999875
No 307
>cd07217 Pat17_PNPLA8_PNPLA9_like4 Patatin-like phospholipase. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=31.29 E-value=53 Score=23.02 Aligned_cols=18 Identities=11% Similarity=0.045 Sum_probs=15.7
Q ss_pred eEEEEchhHHHHHHHHHh
Q psy1324 62 ILIGRDFGGSLVWSFLDK 79 (115)
Q Consensus 62 ~lvg~S~Gg~~a~~~~~~ 79 (115)
.+.|.|.||.+|..++..
T Consensus 44 lIaGTStGgIIAa~la~g 61 (344)
T cd07217 44 FVGGTSTGSIIAACIALG 61 (344)
T ss_pred EEEEecHHHHHHHHHHcC
Confidence 569999999999999864
No 308
>PF01118 Semialdhyde_dh: Semialdehyde dehydrogenase, NAD binding domain; InterPro: IPR000534 The semialdehyde dehydrogenase family is found in N-acetyl-glutamine semialdehyde dehydrogenase (AgrC), which is involved in arginine biosynthesis, and aspartate-semialdehyde dehydrogenase [], an enzyme involved in the biosynthesis of various amino acids from aspartate. This family is also found in yeast and fungal Arg5,6 protein, which is cleaved into the enzymes N-acety-gamma-glutamyl-phosphate reductase and acetylglutamate kinase. These are also involved in arginine biosynthesis. All proteins in this entry contain a NAD binding region of semialdehyde dehydrogenase.; GO: 0016620 oxidoreductase activity, acting on the aldehyde or oxo group of donors, NAD or NADP as acceptor, 0051287 NAD binding, 0006520 cellular amino acid metabolic process, 0055114 oxidation-reduction process, 0005737 cytoplasm; PDB: 3Q0E_B 1MB4_A 3PZR_A 1MC4_A 3TZ6_A 3VOS_A 2CVO_B 2R00_C 2QZ9_A 2EP5_C ....
Probab=31.24 E-value=83 Score=18.04 Aligned_cols=31 Identities=16% Similarity=0.417 Sum_probs=19.8
Q ss_pred CeeEEE-EchhHHHHHHHHHhCcccccceEEec
Q psy1324 60 RCILIG-RDFGGSLVWSFLDKYPELVVKSIIIN 91 (115)
Q Consensus 60 ~~~lvg-~S~Gg~~a~~~~~~~~~~v~~~v~~~ 91 (115)
++.++| ..+.|.-..+++.++|+ ++-+.+.+
T Consensus 1 rV~IvGAtG~vG~~l~~lL~~hp~-~e~~~~~~ 32 (121)
T PF01118_consen 1 RVAIVGATGYVGRELLRLLAEHPD-FELVALVS 32 (121)
T ss_dssp EEEEESTTSHHHHHHHHHHHHTST-EEEEEEEE
T ss_pred CEEEECCCCHHHHHHHHHHhcCCC-ccEEEeee
Confidence 356777 77777777777777766 44333333
No 309
>COG4850 Uncharacterized conserved protein [Function unknown]
Probab=31.15 E-value=1.3e+02 Score=21.31 Aligned_cols=49 Identities=16% Similarity=0.249 Sum_probs=35.0
Q ss_pred HHHHHHHHHHHhCCCCeeEEEEchh--HHHHHHHHHhCcccccceEEecCC
Q psy1324 45 LVDSLKVFLDHLGRNRCILIGRDFG--GSLVWSFLDKYPELVVKSIIINVP 93 (115)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~lvg~S~G--g~~a~~~~~~~~~~v~~~v~~~~~ 93 (115)
--..+..++.++...+++|+|-|-= =.+=..++..+|++|.++.+=+..
T Consensus 264 K~~~l~nil~~~p~~kfvLVGDsGE~DpeIYae~v~~fP~RIl~I~IRdvs 314 (373)
T COG4850 264 KGQSLRNILRRYPDRKFVLVGDSGEHDPEIYAEMVRCFPNRILGIYIRDVS 314 (373)
T ss_pred cccHHHHHHHhCCCceEEEecCCCCcCHHHHHHHHHhCccceeeEeeeecc
Confidence 3445666788888899999996643 234456677899999998765544
No 310
>TIGR03169 Nterm_to_SelD pyridine nucleotide-disulfide oxidoreductase family protein. Members of this protein family include N-terminal sequence regions of (probable) bifunctional proteins whose C-terminal sequences are SelD, or selenide,water dikinase, the selenium donor protein necessary for selenium incorporation into protein (as selenocysteine), tRNA (as 2-selenouridine), or both. However, some members of this family occur in species that do not show selenium incorporation, and the function of this protein family is unknown.
Probab=30.96 E-value=72 Score=22.01 Aligned_cols=35 Identities=26% Similarity=0.248 Sum_probs=23.5
Q ss_pred CeeEEEEchhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 60 RCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 60 ~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
+++++|-+++|..+...+.+....-..+++++...
T Consensus 1 ~vvIiGgG~aG~~~a~~l~~~~~~~~~I~li~~~~ 35 (364)
T TIGR03169 1 HLVLIGGGHTHALVLRRWAMKPLPGVRVTLINPSS 35 (364)
T ss_pred CEEEECCcHHHHHHHHHhcCcCCCCCEEEEECCCC
Confidence 47899999999887777654322234677776443
No 311
>COG0813 DeoD Purine-nucleoside phosphorylase [Nucleotide transport and metabolism]
Probab=30.88 E-value=1.2e+02 Score=20.18 Aligned_cols=31 Identities=19% Similarity=0.310 Sum_probs=17.1
Q ss_pred CCeeEEEEchhHHH----HHHHHHhCcccccceEEec
Q psy1324 59 NRCILIGRDFGGSL----VWSFLDKYPELVVKSIIIN 91 (115)
Q Consensus 59 ~~~~lvg~S~Gg~~----a~~~~~~~~~~v~~~v~~~ 91 (115)
+++.+.||.||-.- +..+...+ .|+.+|-++
T Consensus 56 k~iSvmg~GmGipS~sIY~~ELi~~y--~Vk~iIRvG 90 (236)
T COG0813 56 KKISVMGHGMGIPSISIYSRELITDY--GVKKIIRVG 90 (236)
T ss_pred cEEEEEEecCCCccHHHHHHHHHHHh--CcceEEEEE
Confidence 57778888888443 33333333 355555444
No 312
>COG2062 SixA Phosphohistidine phosphatase SixA [Signal transduction mechanisms]
Probab=30.69 E-value=90 Score=19.51 Aligned_cols=21 Identities=24% Similarity=0.532 Sum_probs=12.8
Q ss_pred HHHHHHHHHHhC--CCCeeEEEE
Q psy1324 46 VDSLKVFLDHLG--RNRCILIGR 66 (115)
Q Consensus 46 ~~~~~~~~~~~~--~~~~~lvg~ 66 (115)
...+.+.++.+. ...+.+|||
T Consensus 87 ~~~~l~~l~~~~d~v~~vllVgH 109 (163)
T COG2062 87 PGTVLDYLEALGDGVGSVLLVGH 109 (163)
T ss_pred HHHHHHHHHHhcccCceEEEECC
Confidence 334444444443 478889998
No 313
>PRK09065 glutamine amidotransferase; Provisional
Probab=30.68 E-value=91 Score=20.48 Aligned_cols=34 Identities=18% Similarity=0.160 Sum_probs=23.9
Q ss_pred hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHH
Q psy1324 44 FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFL 77 (115)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~ 77 (115)
.+...+.++++..-...+-++|.|+|.++...++
T Consensus 72 ~w~~~~~~~i~~~~~~~~PvlGIC~G~Qlla~al 105 (237)
T PRK09065 72 DWSERTADWLRQAAAAGMPLLGICYGHQLLAHAL 105 (237)
T ss_pred hhHHHHHHHHHHHHHCCCCEEEEChhHHHHHHHc
Confidence 4555566666654334577999999999877765
No 314
>COG0518 GuaA GMP synthase - Glutamine amidotransferase domain [Nucleotide transport and metabolism]
Probab=30.63 E-value=1.2e+02 Score=19.52 Aligned_cols=36 Identities=17% Similarity=0.110 Sum_probs=27.8
Q ss_pred hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHh
Q psy1324 44 FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDK 79 (115)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~ 79 (115)
.++......+.....+..-++|.|+|.++....+--
T Consensus 63 ~w~~~~~~~i~~~~~p~~pvLGIC~G~Ql~A~~lGg 98 (198)
T COG0518 63 PWLPREKDLIKDAGVPGKPVLGICLGHQLLAKALGG 98 (198)
T ss_pred ccchhHHHHHHHhCCCCCCEEEEChhHHHHHHHhCC
Confidence 347778888888776666799999999987776543
No 315
>PRK01710 murD UDP-N-acetylmuramoyl-L-alanyl-D-glutamate synthetase; Provisional
Probab=30.61 E-value=1e+02 Score=22.29 Aligned_cols=34 Identities=15% Similarity=0.268 Sum_probs=23.1
Q ss_pred HHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhCc
Q psy1324 48 SLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYP 81 (115)
Q Consensus 48 ~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~ 81 (115)
+..+++..+..+++.++|....|..+..++.+..
T Consensus 4 ~~~~~~~~~~~~~i~v~G~G~sG~a~a~~L~~~G 37 (458)
T PRK01710 4 DFNEFKKFIKNKKVAVVGIGVSNIPLIKFLVKLG 37 (458)
T ss_pred hHHHHhhhhcCCeEEEEcccHHHHHHHHHHHHCC
Confidence 4556666665677888888888886666666543
No 316
>PLN02752 [acyl-carrier protein] S-malonyltransferase
Probab=29.34 E-value=50 Score=22.88 Aligned_cols=16 Identities=19% Similarity=0.304 Sum_probs=12.5
Q ss_pred eEEEEchhHHHHHHHH
Q psy1324 62 ILIGRDFGGSLVWSFL 77 (115)
Q Consensus 62 ~lvg~S~Gg~~a~~~~ 77 (115)
.++|||+|=+.+...+
T Consensus 127 ~~~GHSlGE~aA~~~A 142 (343)
T PLN02752 127 VCAGLSLGEYTALVFA 142 (343)
T ss_pred eeeeccHHHHHHHHHh
Confidence 5799999987766555
No 317
>PF09673 TrbC_Ftype: Type-F conjugative transfer system pilin assembly protein; InterPro: IPR019106 This entry represents TrbC, a protein that is an essential component of the F-type conjugative pilus assembly system (aka type 4 secretion system) for the transfer of plasmid DNA [, ]. The N-terminal portion of these proteins is heterogeneous.
Probab=29.29 E-value=1.2e+02 Score=17.47 Aligned_cols=42 Identities=12% Similarity=0.122 Sum_probs=26.8
Q ss_pred eEEEEchhHHHHHHHHHhCcccccceEEecCCCChhHHHHHHh
Q psy1324 62 ILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHPAVFKQELKK 104 (115)
Q Consensus 62 ~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~ 104 (115)
+++..||.-.....++.+..+. ...+.+.+...+.+.+....
T Consensus 2 iFvS~SMP~~~L~~l~~~a~~~-~~~~V~RG~~~g~~~~t~~~ 43 (113)
T PF09673_consen 2 IFVSFSMPDASLRNLLKQAERA-GVVVVFRGFPDGSFKPTAKA 43 (113)
T ss_pred EEEECCCCHHHHHHHHHHHHhC-CcEEEEECCCCCCHHHHHHH
Confidence 4677777777777776665443 66667777666655554443
No 318
>COG1092 Predicted SAM-dependent methyltransferases [General function prediction only]
Probab=28.95 E-value=2.3e+02 Score=20.54 Aligned_cols=46 Identities=11% Similarity=0.049 Sum_probs=27.4
Q ss_pred CceEEEecCCCCCCCccchh----hHHHHHHHHHHHhCCCCeeEEEEchh
Q psy1324 24 EYWTVAVDIKTNFRTIADRY----FLVDSLKVFLDHLGRNRCILIGRDFG 69 (115)
Q Consensus 24 ~~~v~~~d~~g~g~s~~~~~----~~~~~~~~~~~~~~~~~~~lvg~S~G 69 (115)
.|.++.+|.|.++.++...+ +..+.+...++-+..+-+.++-.+..
T Consensus 290 ~fDlIilDPPsF~r~k~~~~~~~rdy~~l~~~~~~iL~pgG~l~~~s~~~ 339 (393)
T COG1092 290 KFDLIILDPPSFARSKKQEFSAQRDYKDLNDLALRLLAPGGTLVTSSCSR 339 (393)
T ss_pred cccEEEECCcccccCcccchhHHHHHHHHHHHHHHHcCCCCEEEEEecCC
Confidence 79999999999999944433 33333344444444444444443333
No 319
>cd03129 GAT1_Peptidase_E_like Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E_like proteins. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E and, extracellular cyanophycinases from Pseudomonas anguilliseptica BI (CphE) and Synechocystis sp. PCC 6803 CphB. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Cyanophycinases are intracellular exopeptidases which hydrolyze the polymer cyanophycin (multi L-arginyl-poly-L-aspartic acid) to the dipeptide beta-Asp-Arg. Peptidase E and cyanophycinases are thought to have a Ser-His-Glu catalytic triad which differs from
Probab=28.83 E-value=73 Score=20.30 Aligned_cols=23 Identities=13% Similarity=0.267 Sum_probs=17.8
Q ss_pred HHHhCCCCeeEEEEchhHHHHHHH
Q psy1324 53 LDHLGRNRCILIGRDFGGSLVWSF 76 (115)
Q Consensus 53 ~~~~~~~~~~lvg~S~Gg~~a~~~ 76 (115)
.+.+. +...++|.|.|+.+....
T Consensus 108 ~~~~~-~G~v~~G~SAGA~~~~~~ 130 (210)
T cd03129 108 LKRVA-RGVVIGGTSAGAAVMGET 130 (210)
T ss_pred HHHHH-cCCeEEEcCHHHHHhhhc
Confidence 33333 567999999999998885
No 320
>PF06309 Torsin: Torsin; InterPro: IPR010448 This family consists of several eukaryotic torsin proteins. Torsion dystonia is an autosomal dominant movement disorder characterised by involuntary, repetitive muscle contractions and twisted postures. The most severe early-onset form of dystonia has been linked to mutations in the human DYT1 (TOR1A) gene encoding a protein termed torsinA. While causative genetic alterations have been identified, the function of torsin proteins and the molecular mechanism underlying dystonia remain unknown. Phylogenetic analysis of the torsin protein family indicates these proteins share distant sequence similarity with the large and diverse family of AAA ATPase, central region containing proteins () proteins. It has been suggested that torsins play a role in effectively managing protein folding and that possible breakdown in a neuroprotective mechanism that is, in part, mediated by torsins may be responsible for the neuronal dysfunction associated with dystonia [].; GO: 0005524 ATP binding, 0051085 chaperone mediated protein folding requiring cofactor
Probab=28.71 E-value=35 Score=20.35 Aligned_cols=14 Identities=21% Similarity=0.394 Sum_probs=11.8
Q ss_pred CEeecCCCCCHhhH
Q psy1324 1 MLFLHGFPESWYIW 14 (115)
Q Consensus 1 vl~~hG~~~~~~~~ 14 (115)
|+-+||++++...|
T Consensus 55 VlSfHG~tGtGKn~ 68 (127)
T PF06309_consen 55 VLSFHGWTGTGKNF 68 (127)
T ss_pred EEEeecCCCCcHHH
Confidence 56799999998877
No 321
>cd03379 beta_CA_cladeD Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=28.59 E-value=1e+02 Score=18.51 Aligned_cols=25 Identities=28% Similarity=0.219 Sum_probs=18.2
Q ss_pred HHHHHHHHHHHhCCCCeeEEEEchh
Q psy1324 45 LVDSLKVFLDHLGRNRCILIGRDFG 69 (115)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~lvg~S~G 69 (115)
....+.-.+..++.+.++++||+-=
T Consensus 42 ~~~sl~~av~~l~~~~IiV~gHt~C 66 (142)
T cd03379 42 AIRSLVVSVYLLGTREIIVIHHTDC 66 (142)
T ss_pred HHHHHHHHHHHhCCCEEEEEeecCC
Confidence 4455555567778899999999743
No 322
>PRK06490 glutamine amidotransferase; Provisional
Probab=28.57 E-value=1.8e+02 Score=19.21 Aligned_cols=34 Identities=9% Similarity=0.088 Sum_probs=23.3
Q ss_pred hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHH
Q psy1324 44 FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFL 77 (115)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~ 77 (115)
.+...+.++++..-...+-++|.|+|..+....+
T Consensus 70 ~wi~~~~~~i~~~~~~~~PvLGIC~G~Qlla~al 103 (239)
T PRK06490 70 DFIRREIDWISVPLKENKPFLGICLGAQMLARHL 103 (239)
T ss_pred hHHHHHHHHHHHHHHCCCCEEEECHhHHHHHHHc
Confidence 4555555666654334567999999999877764
No 323
>COG0279 GmhA Phosphoheptose isomerase [Carbohydrate transport and metabolism]
Probab=28.52 E-value=1.6e+02 Score=18.71 Aligned_cols=70 Identities=16% Similarity=0.132 Sum_probs=42.3
Q ss_pred EeecCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC-cc-------chhhHHHHHHHHHHHhCCCCeeEEEEchhHH
Q psy1324 2 LFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT-IA-------DRYFLVDSLKVFLDHLGRNRCILIGRDFGGS 71 (115)
Q Consensus 2 l~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s-~~-------~~~~~~~~~~~~~~~~~~~~~~lvg~S~Gg~ 71 (115)
|++=|.+++..+=+++..+|...|..-.+.+|...-+ .. .+|..-.-....++.++.+-=+++|.|-.|.
T Consensus 44 vl~cGNGgSaadAqHfaael~gRf~~eR~~lpaIaLt~dsS~lTai~NDy~yd~vFsRqveA~g~~GDvLigISTSGN 121 (176)
T COG0279 44 VLACGNGGSAADAQHFAAELTGRFEKERPSLPAIALSTDSSVLTAIANDYGYDEVFSRQVEALGQPGDVLIGISTSGN 121 (176)
T ss_pred EEEECCCcchhhHHHHHHHHhhHHHhcCCCCCeeEeecccHHHhhhhccccHHHHHHHHHHhcCCCCCEEEEEeCCCC
Confidence 4666888888888888888766666555555544333 11 1122333344555667766667778777663
No 324
>COG2885 OmpA Outer membrane protein and related peptidoglycan-associated (lipo)proteins [Cell envelope biogenesis, outer membrane]
Probab=28.39 E-value=83 Score=19.71 Aligned_cols=24 Identities=21% Similarity=0.299 Sum_probs=20.2
Q ss_pred hHHHHHHHHHHHhCCCCeeEEEEc
Q psy1324 44 FLVDSLKVFLDHLGRNRCILIGRD 67 (115)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~lvg~S 67 (115)
..++.+..++++....++.+.||.
T Consensus 100 ~~L~~~a~~L~~~p~~~i~V~GHT 123 (190)
T COG2885 100 ATLDELAKYLKKNPITRILVEGHT 123 (190)
T ss_pred HHHHHHHHHHHhCCCcEEEEEecC
Confidence 778888888888888899999983
No 325
>PF07521 RMMBL: RNA-metabolising metallo-beta-lactamase; InterPro: IPR011108 The metallo-beta-lactamase fold contains five sequence motifs. The first four motifs are found in IPR001279 from INTERPRO and are common to all metallo-beta-lactamases. The fifth motif appears to be specific to function. This entry represents the fifth motif from metallo-beta-lactamases involved in RNA metabolism [].; PDB: 3ZQ4_D 2I7T_A 2I7V_A 2YCB_B 3BK1_A 3T3N_A 3BK2_A 3T3O_A 3AF5_A 3AF6_A ....
Probab=28.14 E-value=75 Score=14.73 Aligned_cols=31 Identities=19% Similarity=0.280 Sum_probs=18.0
Q ss_pred ceEEEecCCCCCCCccchhhHHHHHHHHHHHhCCCCeeE
Q psy1324 25 YWTVAVDIKTNFRTIADRYFLVDSLKVFLDHLGRNRCIL 63 (115)
Q Consensus 25 ~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~l 63 (115)
..+..+++.|| ...+++..+++.+..+.+++
T Consensus 7 a~v~~~~fSgH--------ad~~~L~~~i~~~~p~~vil 37 (43)
T PF07521_consen 7 ARVEQIDFSGH--------ADREELLEFIEQLNPRKVIL 37 (43)
T ss_dssp SEEEESGCSSS---------BHHHHHHHHHHHCSSEEEE
T ss_pred EEEEEEeecCC--------CCHHHHHHHHHhcCCCEEEE
Confidence 34555666666 34566777787775444443
No 326
>KOG0780|consensus
Probab=27.78 E-value=2.5e+02 Score=20.68 Aligned_cols=19 Identities=16% Similarity=0.352 Sum_probs=14.0
Q ss_pred HHhhhC-CceEEEecCCCCC
Q psy1324 18 MSEFSH-EYWTVAVDIKTNF 36 (115)
Q Consensus 18 ~~~l~~-~~~v~~~d~~g~g 36 (115)
.+.+++ +|.++.+|-.|..
T Consensus 176 v~~fKke~fdvIIvDTSGRh 195 (483)
T KOG0780|consen 176 VDRFKKENFDVIIVDTSGRH 195 (483)
T ss_pred HHHHHhcCCcEEEEeCCCch
Confidence 345544 8999999988764
No 327
>PF03568 Peptidase_C50: Peptidase family C50; InterPro: IPR005314 In the MEROPS database peptidases and peptidase homologues are grouped into clans and families. Clans are groups of families for which there is evidence of common ancestry based on a common structural fold: Each clan is identified with two letters, the first representing the catalytic type of the families included in the clan (with the letter 'P' being used for a clan containing families of more than one of the catalytic types serine, threonine and cysteine). Some families cannot yet be assigned to clans, and when a formal assignment is required, such a family is described as belonging to clan A-, C-, M-, N-, S-, T- or U-, according to the catalytic type. Some clans are divided into subclans because there is evidence of a very ancient divergence within the clan, for example MA(E), the gluzincins, and MA(M), the metzincins. Peptidase families are grouped by their catalytic type, the first character representing the catalytic type: A, aspartic; C, cysteine; G, glutamic acid; M, metallo; N, asparagine; S, serine; T, threonine; and U, unknown. The serine, threonine and cysteine peptidases utilise the amino acid as a nucleophile and form an acyl intermediate - these peptidases can also readily act as transferases. In the case of aspartic, glutamic and metallopeptidases, the nucleophile is an activated water molecule. In the case of the asparagine endopeptidases, the nucleophile is asparagine and all are self-processing endopeptidases. In many instances the structural protein fold that characterises the clan or family may have lost its catalytic activity, yet retain its function in protein recognition and binding. Cysteine peptidases have characteristic molecular topologies, which can be seen not only in their three-dimensional structures, but commonly also in the two-dimensional structures. These are peptidases in which the nucleophile is the sulphydryl group of a cysteine residue. Cysteine proteases are divided into clans (proteins which are evolutionary related), and further sub-divided into families, on the basis of the architecture of their catalytic dyad or triad []. This group of cysteine peptidases belong to MEROPS peptidase family C50 (separase family, clan CD). The active site residues for members of this family and family C14 occur in the same order in the sequence: H,C. The separases are caspase-like proteases, which plays a central role in the chromosome segregation. In yeast they cleave the rad21 subunit of the cohesin complex at the onset of anaphase. During most of the cell cycle, separase is inactivated by the securin/cut2 protein, which probably covers its active site. ; GO: 0008233 peptidase activity, 0006508 proteolysis, 0005634 nucleus
Probab=27.59 E-value=88 Score=22.25 Aligned_cols=44 Identities=14% Similarity=0.168 Sum_probs=25.8
Q ss_pred HHHHhCCCCee-EEEEchhHHHHHHHHHhCcccccceEEecCCCC
Q psy1324 52 FLDHLGRNRCI-LIGRDFGGSLVWSFLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 52 ~~~~~~~~~~~-lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~ 95 (115)
+.+.+....++ .+||.-|......-..+.-+.....++++|...
T Consensus 302 ~~~~l~~~dlf~Y~GHG~G~qy~~~~~i~~~~~~~~~lL~GCsS~ 346 (383)
T PF03568_consen 302 FLQALTSSDLFLYCGHGSGEQYISGSTIQRLDCCAVSLLMGCSSG 346 (383)
T ss_pred HHHHHHhCCeEEEecCCcHHHhCCHhhhccccccCceEEecCCcc
Confidence 33333333444 499999988754433333345667778887653
No 328
>cd03146 GAT1_Peptidase_E Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. Type 1 glutamine amidotransferase (GATase1)-like domain found in peptidase E. This group contains proteins similar to the aspartyl dipeptidases Salmonella typhimurium peptidase E and Xenopus laevis peptidase E. In bacteria peptidase E is believed to play a role in degrading peptides generated by intracellular protein breakdown or imported into the cell as nutrient sources. Peptidase E uniquely hydrolyses only Asp-X dipeptides (where X is any amino acid), and one tripeptide Asp-Gly-Gly. Peptidase E is believed to be a serine peptidase having a Ser-His-Glu catalytic triad which differs from the Cys-His-Glu catalytic triad typical of GATase1 domains by having a Ser in place of the reactive Cys at the nucleophile elbow. Xenopus PepE is developmentally regulated in response to thyroid hormone and, it is thought to play a role in apoptosis during tail reabsorption.
Probab=27.56 E-value=71 Score=20.50 Aligned_cols=36 Identities=11% Similarity=0.075 Sum_probs=22.7
Q ss_pred CCeeEEEEchhHHHHHHH-HHh------CcccccceEEecCCC
Q psy1324 59 NRCILIGRDFGGSLVWSF-LDK------YPELVVKSIIINVPH 94 (115)
Q Consensus 59 ~~~~lvg~S~Gg~~a~~~-~~~------~~~~v~~~v~~~~~~ 94 (115)
+...++|.|.|+++.... ... .+...+++-+++...
T Consensus 113 ~g~~i~G~SAGa~i~~~~~~~~~~~~~e~~~~~~GLGll~~~v 155 (212)
T cd03146 113 RGVVYIGWSAGSNCWFPSIGTTDSMPIELPPSFNGLGLLPFQI 155 (212)
T ss_pred CCCEEEEECHhHHhhCCCccccCCCCCccccccceecCcCccc
Confidence 457899999999988773 111 112456666665433
No 329
>PRK07877 hypothetical protein; Provisional
Probab=27.51 E-value=2e+02 Score=22.67 Aligned_cols=39 Identities=18% Similarity=0.299 Sum_probs=27.7
Q ss_pred HHHhCCCCeeEEEEchhHHHHHHHHHhCcccccceEEecCC
Q psy1324 53 LDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVP 93 (115)
Q Consensus 53 ~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~ 93 (115)
.+++...+|.++|-+.|+.++..++.. .-+..+.+++..
T Consensus 102 Q~~L~~~~V~IvG~GlGs~~a~~Lara--GvvG~l~lvD~D 140 (722)
T PRK07877 102 QERLGRLRIGVVGLSVGHAIAHTLAAE--GLCGELRLADFD 140 (722)
T ss_pred HHHHhcCCEEEEEecHHHHHHHHHHHc--cCCCeEEEEcCC
Confidence 345556799999999888888777655 124777777754
No 330
>cd01741 GATase1_1 Subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. This group contains a subgroup of proteins having the Type 1 glutamine amidotransferase (GATase1) domain. GATase activity catalyses the transfer of ammonia from the amide side chain of glutamine to an acceptor substrate. Glutamine amidotransferases (GATase) includes the triad family of amidotransferases which have a conserved Cys-His-Glu catalytic triad in the glutaminase active site. In this subgroup this triad is conserved. GATase activity can be found in a range of biosynthetic enzymes, including: glutamine amidotransferase, formylglycinamide ribonucleotide, GMP synthetase , anthranilate synthase component II, glutamine-dependent carbamoyl phosphate synthase, cytidine triphosphate synthetase, gamma-glutamyl hydrolase, imidazole glycerol phosphate synthase and, cobyric acid synthase. Glutamine amidotransferase (GATase) domains can occur either as single polypeptides, as in glutamine
Probab=27.49 E-value=1.3e+02 Score=18.67 Aligned_cols=34 Identities=18% Similarity=0.127 Sum_probs=23.4
Q ss_pred hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHH
Q psy1324 44 FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFL 77 (115)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~ 77 (115)
.+.+.+.++++..-....-++|.|+|..+....+
T Consensus 65 ~~~~~~~~~i~~~~~~~~pilgiC~G~q~l~~~l 98 (188)
T cd01741 65 PWLKKLKELIRQALAAGKPVLGICLGHQLLARAL 98 (188)
T ss_pred hHHHHHHHHHHHHHHCCCCEEEECccHHHHHHHh
Confidence 4455566666655335578999999998776654
No 331
>PRK11889 flhF flagellar biosynthesis regulator FlhF; Provisional
Probab=27.47 E-value=2.6e+02 Score=20.66 Aligned_cols=79 Identities=5% Similarity=0.044 Sum_probs=46.0
Q ss_pred CHhhHHHHHHhhhC--CceEEEecCCCCCCCccchhhHHHHHHHHHHHhCCCCeeEE-EEchhHHHHHHHHHhCcc-ccc
Q psy1324 10 SWYIWKHQMSEFSH--EYWTVAVDIKTNFRTIADRYFLVDSLKVFLDHLGRNRCILI-GRDFGGSLVWSFLDKYPE-LVV 85 (115)
Q Consensus 10 ~~~~~~~~~~~l~~--~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~lv-g~S~Gg~~a~~~~~~~~~-~v~ 85 (115)
+...+......+.+ ++.++.+|-+|...... ...+.+..+++......++++ .-+.++.-+...+..+.. .+.
T Consensus 304 d~~~L~~aL~~lk~~~~~DvVLIDTaGRs~kd~---~lm~EL~~~lk~~~PdevlLVLsATtk~~d~~~i~~~F~~~~id 380 (436)
T PRK11889 304 DEAAMTRALTYFKEEARVDYILIDTAGKNYRAS---ETVEEMIETMGQVEPDYICLTLSASMKSKDMIEIITNFKDIHID 380 (436)
T ss_pred CHHHHHHHHHHHHhccCCCEEEEeCccccCcCH---HHHHHHHHHHhhcCCCeEEEEECCccChHHHHHHHHHhcCCCCC
Confidence 33444444555543 68999999998754311 345556666655443444454 334566666666666543 477
Q ss_pred ceEEec
Q psy1324 86 KSIIIN 91 (115)
Q Consensus 86 ~~v~~~ 91 (115)
++|+.-
T Consensus 381 glI~TK 386 (436)
T PRK11889 381 GIVFTK 386 (436)
T ss_pred EEEEEc
Confidence 777654
No 332
>KOG2872|consensus
Probab=27.10 E-value=2.3e+02 Score=19.92 Aligned_cols=50 Identities=22% Similarity=0.407 Sum_probs=29.8
Q ss_pred HHhhhC-CceEEEecCCCC--------CCC-----ccch---h----hHHHHHHHHHHHhCCCCeeE-EEEc
Q psy1324 18 MSEFSH-EYWTVAVDIKTN--------FRT-----IADR---Y----FLVDSLKVFLDHLGRNRCIL-IGRD 67 (115)
Q Consensus 18 ~~~l~~-~~~v~~~d~~g~--------g~s-----~~~~---~----~~~~~~~~~~~~~~~~~~~l-vg~S 67 (115)
.+++++ ||.|+..|+.-. |.. ..+. | ...+.+.+.++..|..+.++ +||.
T Consensus 265 Le~l~~tG~DVvgLDWTvdp~ear~~~g~~VtlQGNlDP~~ly~s~e~it~~v~~mv~~fG~~ryI~NLGHG 336 (359)
T KOG2872|consen 265 LEELAQTGYDVVGLDWTVDPAEARRRVGNRVTLQGNLDPGVLYGSKEEITQLVKQMVKDFGKSRYIANLGHG 336 (359)
T ss_pred HHHHHhcCCcEEeecccccHHHHHHhhCCceEEecCCChHHhcCCHHHHHHHHHHHHHHhCccceEEecCCC
Confidence 345554 999999987532 222 1111 3 56667778888888555444 6664
No 333
>PF11009 DUF2847: Protein of unknown function (DUF2847); InterPro: IPR022551 Members of this protein family, including YtxJ from Bacillus subtilis, occur in species that encode proteins for synthesizing bacillithiol. The protein is described as thioredoxin-like, while another bacillithiol-associated protein, YpdA (TIGR04018 from TIGRFAMS), is described as thioredoxin reductase-like. ; PDB: 3IV4_A.
Probab=27.09 E-value=1.3e+02 Score=17.28 Aligned_cols=36 Identities=8% Similarity=0.136 Sum_probs=25.1
Q ss_pred HHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhC
Q psy1324 45 LVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKY 80 (115)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~ 80 (115)
..+++.++++.-..+++.+.-||--+.++.++..++
T Consensus 6 t~eql~~i~~~S~~~~~~iFKHSt~C~IS~~a~~~~ 41 (105)
T PF11009_consen 6 TEEQLEEILEESKEKPVLIFKHSTRCPISAMALREF 41 (105)
T ss_dssp SHHHHHHHHHH---SEEEEEEE-TT-HHHHHHHHHH
T ss_pred CHHHHHHHHHhcccCcEEEEEeCCCChhhHHHHHHH
Confidence 356778888776678999999999999988877664
No 334
>PRK07053 glutamine amidotransferase; Provisional
Probab=27.07 E-value=92 Score=20.46 Aligned_cols=33 Identities=15% Similarity=0.105 Sum_probs=22.9
Q ss_pred HHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHH
Q psy1324 45 LVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFL 77 (115)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~ 77 (115)
+.....+++++.-...+-++|.|+|..+....+
T Consensus 68 ~~~~~~~~i~~~~~~~~PvlGIC~G~Qlla~al 100 (234)
T PRK07053 68 FLAPEIALLRQRLAAGLPTLGICLGAQLIARAL 100 (234)
T ss_pred cHHHHHHHHHHHHHCCCCEEEECccHHHHHHHc
Confidence 445555666654334567999999999887776
No 335
>COG2230 Cfa Cyclopropane fatty acid synthase and related methyltransferases [Cell envelope biogenesis, outer membrane]
Probab=26.54 E-value=2.1e+02 Score=19.73 Aligned_cols=60 Identities=22% Similarity=0.218 Sum_probs=36.0
Q ss_pred CceEEEecCCCCCCCccchhhHHHHHHHHHHHhCCC--CeeE-EEEchhHHHHHHHHHhCcccccceE
Q psy1324 24 EYWTVAVDIKTNFRTIADRYFLVDSLKVFLDHLGRN--RCIL-IGRDFGGSLVWSFLDKYPELVVKSI 88 (115)
Q Consensus 24 ~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~--~~~l-vg~S~Gg~~a~~~~~~~~~~v~~~v 88 (115)
.|.|-.++-+...- .. .+.+.+..+.++++.+ .-.| +|..+|+.. ..+|.++..+|.++-
T Consensus 40 ~Yscayf~~~~~tL-~e---AQ~~k~~~~~~kl~L~~G~~lLDiGCGWG~l~-~~aA~~y~v~V~GvT 102 (283)
T COG2230 40 TYSCAYFEDPDMTL-EE---AQRAKLDLILEKLGLKPGMTLLDIGCGWGGLA-IYAAEEYGVTVVGVT 102 (283)
T ss_pred ceeeEEeCCCCCCh-HH---HHHHHHHHHHHhcCCCCCCEEEEeCCChhHHH-HHHHHHcCCEEEEee
Confidence 56666665543310 11 5666777888887753 3445 998888764 445566656666654
No 336
>COG1252 Ndh NADH dehydrogenase, FAD-containing subunit [Energy production and conversion]
Probab=26.32 E-value=1.1e+02 Score=22.08 Aligned_cols=45 Identities=20% Similarity=0.282 Sum_probs=33.5
Q ss_pred CCeeEEEEchhHHHHHHHHHhCcccccceEEecCCCChhHHHHHHh
Q psy1324 59 NRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHPAVFKQELKK 104 (115)
Q Consensus 59 ~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~~~~~~~~~~ 104 (115)
++++++|-.+||..+..-+.+.+ .=..+++++....-.+.+.+.+
T Consensus 4 ~~iVIlGgGfgGl~~a~~l~~~~-~~~~itLVd~~~~hl~~plL~e 48 (405)
T COG1252 4 KRIVILGGGFGGLSAAKRLARKL-PDVEITLVDRRDYHLFTPLLYE 48 (405)
T ss_pred ceEEEECCcHHHHHHHHHhhhcC-CCCcEEEEeCCCccccchhhhh
Confidence 57999999999999988888876 3233678887766655555543
No 337
>COG1576 Uncharacterized conserved protein [Function unknown]
Probab=25.78 E-value=1.7e+02 Score=18.16 Aligned_cols=50 Identities=22% Similarity=0.247 Sum_probs=28.3
Q ss_pred HHHhhhCCceEEEecCCCCCCCccchhhHHHHHHHHHHHhCCCCe-eEEEEchhHH
Q psy1324 17 QMSEFSHEYWTVAVDIKTNFRTIADRYFLVDSLKVFLDHLGRNRC-ILIGRDFGGS 71 (115)
Q Consensus 17 ~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~-~lvg~S~Gg~ 71 (115)
+...+.++-.+++.|.+|-..+.+ ++++.+... +..| ..+ +++|-|.|=-
T Consensus 60 il~~i~~~~~vi~Ld~~Gk~~sSe---~fA~~l~~~-~~~G-~~i~f~IGG~~Gl~ 110 (155)
T COG1576 60 ILAAIPKGSYVVLLDIRGKALSSE---EFADFLERL-RDDG-RDISFLIGGADGLS 110 (155)
T ss_pred HHHhcCCCCeEEEEecCCCcCChH---HHHHHHHHH-HhcC-CeEEEEEeCcccCC
Confidence 344556677888999987765522 223333222 2234 444 4588888843
No 338
>PRK14046 malate--CoA ligase subunit beta; Provisional
Probab=25.68 E-value=54 Score=23.43 Aligned_cols=31 Identities=23% Similarity=0.396 Sum_probs=27.4
Q ss_pred CCeeEEEEchhHHHHHHHHHhCcccccceEE
Q psy1324 59 NRCILIGRDFGGSLVWSFLDKYPELVVKSII 89 (115)
Q Consensus 59 ~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~ 89 (115)
.+++++|.+.||...=..+.++|+.+.++.+
T Consensus 119 g~~v~~~s~~GGv~iEe~~~~~p~~i~~~~i 149 (392)
T PRK14046 119 ERVRVIASARGGMEIEEIAAKEPEAIIQVVV 149 (392)
T ss_pred CcEEEEEeCCCCCchHHHhhhChhheEEEEc
Confidence 4778999999999999999999999888764
No 339
>PRK02135 hypothetical protein; Provisional
Probab=25.42 E-value=1.1e+02 Score=19.91 Aligned_cols=59 Identities=10% Similarity=0.061 Sum_probs=35.2
Q ss_pred cCCCCCHhhHHHHHHhhhCCceEEEecCCCCCCC----ccch-h------hHHHHHHHHHHHhCCCCeeE
Q psy1324 5 HGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT----IADR-Y------FLVDSLKVFLDHLGRNRCIL 63 (115)
Q Consensus 5 hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~g~s----~~~~-~------~~~~~~~~~~~~~~~~~~~l 63 (115)
+|.......++.+.+.+.+++.++..+--|-.-. +.+. | .+.+.-.+++++++.+++.+
T Consensus 107 pGi~V~~~~fe~ll~~~~e~~~l~~L~e~G~~i~~~~~~~~~~FvLgDH~~~~~ee~~~L~~~ga~~iSl 176 (201)
T PRK02135 107 PGIYVRRRGFEDLLEELAEGKTLYYLHEDGEDIRDVEFPENPVFVLGDHIGFTEEEENLLKRLGAEKISL 176 (201)
T ss_pred CCEEEecCCHHHHHHHHhcCCcEEEEeCCCCchhhccCCCCCEEEEeCCCCCCHHHHHHHHHhCCeEEEe
Confidence 3444445567778888877888888876554332 2222 3 55556666666666555544
No 340
>KOG3179|consensus
Probab=24.96 E-value=1.6e+02 Score=19.43 Aligned_cols=35 Identities=17% Similarity=0.201 Sum_probs=29.1
Q ss_pred hHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHH
Q psy1324 44 FLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLD 78 (115)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~ 78 (115)
+|...+..+++.+...+.-++|.++|=.+..+..-
T Consensus 77 dWI~KLcs~~kkld~mkkkvlGICFGHQiiara~G 111 (245)
T KOG3179|consen 77 DWIKKLCSFVKKLDFMKKKVLGICFGHQIIARAKG 111 (245)
T ss_pred hHHHHHHHHHHHHHhhccceEEEeccHHHHHHhhC
Confidence 88888899999987777789999999888777643
No 341
>cd07211 Pat_PNPLA8 Patatin-like phospholipase domain containing protein 8. PNPLA8 is a Ca-independent myocardial phospholipase which maintains mitochondrial integrity. PNPLA8 is also known as iPLA2-gamma. In humans, it is predominantly expressed in heart tissue. iPLA2-gamma can catalyze both phospholipase A1 and A2 reactions (PLA1 and PLA2 respectively). This family includes PNPLA8 (iPLA2-gamma) from Homo sapiens and iPLA2-2 from Mus musculus.
Probab=24.85 E-value=69 Score=21.81 Aligned_cols=17 Identities=18% Similarity=0.167 Sum_probs=14.9
Q ss_pred eEEEEchhHHHHHHHHH
Q psy1324 62 ILIGRDFGGSLVWSFLD 78 (115)
Q Consensus 62 ~lvg~S~Gg~~a~~~~~ 78 (115)
.+.|-|.||.+|..++.
T Consensus 44 li~GTStGgiiA~~la~ 60 (308)
T cd07211 44 YICGVSTGAILAFLLGL 60 (308)
T ss_pred EEEecChhHHHHHHHhc
Confidence 46999999999999875
No 342
>PRK11789 N-acetyl-anhydromuranmyl-L-alanine amidase; Provisional
Probab=24.57 E-value=1.5e+02 Score=18.92 Aligned_cols=24 Identities=8% Similarity=-0.074 Sum_probs=14.3
Q ss_pred HHHHHHHHHHHhCCCCeeEEEEch
Q psy1324 45 LVDSLKVFLDHLGRNRCILIGRDF 68 (115)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~lvg~S~ 68 (115)
....+..++++.+..+-.++||+-
T Consensus 135 L~~L~~~L~~~y~i~~~~IvGH~d 158 (185)
T PRK11789 135 LAALTRALRAAYPIIAERITGHSD 158 (185)
T ss_pred HHHHHHHHHHHcCCCHHhEEehhh
Confidence 344444555555555567999974
No 343
>KOG2248|consensus
Probab=24.31 E-value=1.1e+02 Score=22.02 Aligned_cols=48 Identities=15% Similarity=0.307 Sum_probs=32.5
Q ss_pred HHHHHHHHHHhCCCCeeEEEEchhHH-HHHHHHHhCcccccceEEecCCCC
Q psy1324 46 VDSLKVFLDHLGRNRCILIGRDFGGS-LVWSFLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 46 ~~~~~~~~~~~~~~~~~lvg~S~Gg~-~a~~~~~~~~~~v~~~v~~~~~~~ 95 (115)
.+++...+..+-....+++|||.=.- .++.+ .||.-++..+++..+..
T Consensus 280 l~dvq~~l~~~~~~~TILVGHSLenDL~aLKl--~H~~ViDTa~lf~~~~g 328 (380)
T KOG2248|consen 280 LEDVQKELLELISKNTILVGHSLENDLKALKL--DHPSVIDTAVLFKHPTG 328 (380)
T ss_pred HHHHHHHHHhhcCcCcEEEeechhhHHHHHhh--hCCceeeeeEEEecCCC
Confidence 45666555555557889999999844 34544 57778888777765544
No 344
>cd07219 Pat_PNPLA1 Patatin-like phospholipase domain containing protein 1. Members of this family share a patatin domain, initially discovered in potato tubers. Some members of PNPLA1 subfamily do not have the lipase consensus sequence Gly-X-Ser-X-Gly which is essential for hydrolase activity. This family includes PNPLA1 from Homo sapiens and Gallus gallus. Currently, there is no literature available on the physiological role, structure, or enzymatic activity of PNPLA1. It is expressed in various human tissues in low mRNA levels.
Probab=24.25 E-value=1.8e+02 Score=21.02 Aligned_cols=20 Identities=10% Similarity=0.036 Sum_probs=17.0
Q ss_pred eeEEEEchhHHHHHHHHHhC
Q psy1324 61 CILIGRDFGGSLVWSFLDKY 80 (115)
Q Consensus 61 ~~lvg~S~Gg~~a~~~~~~~ 80 (115)
-.++|-|.|+.++..++...
T Consensus 46 d~IaGtSAGALvAAl~asG~ 65 (382)
T cd07219 46 HRVAGTSAGSVIAALVVCGI 65 (382)
T ss_pred CeEEEEcHHHHHHHHHHhCC
Confidence 35899999999999988763
No 345
>cd00382 beta_CA Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=24.19 E-value=1.4e+02 Score=17.33 Aligned_cols=30 Identities=23% Similarity=0.306 Sum_probs=22.3
Q ss_pred hHHHHHHHHHHHhCCCCeeEEEEchhHHHH
Q psy1324 44 FLVDSLKVFLDHLGRNRCILIGRDFGGSLV 73 (115)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a 73 (115)
.....+.-.+..++.+.++++||+--|.+.
T Consensus 44 ~~~~sl~~av~~l~v~~ivV~gHt~CG~v~ 73 (119)
T cd00382 44 DVLASLEYAVEVLGVKHIIVCGHTDCGAVK 73 (119)
T ss_pred cHHHHHHHHHHhhCCCEEEEEccCCCcHHH
Confidence 355666666778899999999997665544
No 346
>PF01973 MAF_flag10: Protein of unknown function DUF115; InterPro: IPR002826 The prokaryotic proteins in this family have no known function.
Probab=23.95 E-value=1.5e+02 Score=18.11 Aligned_cols=26 Identities=23% Similarity=0.291 Sum_probs=17.2
Q ss_pred hHHHHHHHHHHHhCCCCeeEEEEchh
Q psy1324 44 FLVDSLKVFLDHLGRNRCILIGRDFG 69 (115)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~lvg~S~G 69 (115)
.......++...++.++++++|..++
T Consensus 141 sV~~~a~~lA~~lG~~~I~L~G~D~~ 166 (170)
T PF01973_consen 141 SVANTALQLAYYLGFKPIYLIGQDLA 166 (170)
T ss_pred cHHHHHHHHHHHHCCCcEEEEeecCC
Confidence 44555556666777788888886654
No 347
>PF05049 IIGP: Interferon-inducible GTPase (IIGP); InterPro: IPR007743 Interferon-inducible GTPase (IIGP) is thought to play a role in in intracellular defence. IIGP is predominantly associated with the Golgi apparatus and also localizes to the endoplasmic reticulum and exerts a distinct role in IFN-induced intracellular membrane trafficking or processing [].; GO: 0005525 GTP binding, 0016817 hydrolase activity, acting on acid anhydrides, 0016020 membrane; PDB: 1TPZ_A 1TQD_A 1TQ6_A 1TQ2_B 1TQ4_A.
Probab=23.91 E-value=94 Score=22.27 Aligned_cols=13 Identities=8% Similarity=-0.245 Sum_probs=9.2
Q ss_pred eEEEecCCCCCCC
Q psy1324 26 WTVAVDIKTNFRT 38 (115)
Q Consensus 26 ~v~~~d~~g~g~s 38 (115)
+|..+|+||.|..
T Consensus 87 nv~lWDlPG~gt~ 99 (376)
T PF05049_consen 87 NVTLWDLPGIGTP 99 (376)
T ss_dssp TEEEEEE--GGGS
T ss_pred CCeEEeCCCCCCC
Confidence 4888999999877
No 348
>cd06143 PAN2_exo DEDDh 3'-5' exonuclease domain of the eukaryotic exoribonuclease PAN2. PAN2 is the catalytic subunit of poly(A) nuclease (PAN), a Pab1p-dependent 3'-5' exoribonuclease which plays an important role in the posttranscriptional maturation of pre-mRNAs. PAN catalyzes the deadenylation of poly(A) tails, which are initially synthesized to default lengths of 70 to 90, to mRNA-specific lengths of 55 to 71. Pab1p and PAN also play a role in the export and decay of mRNA. PAN2 contains a DEDDh-type DnaQ-like 3'-5' exonuclease domain with three conserved sequence motifs termed ExoI, ExoII and ExoIII, with a specific Hx(4)D conserved pattern at ExoIII. These motifs are clustered around the active site and contain four conserved acidic residues that serve as ligands for the two metal ions required for catalysis.
Probab=23.85 E-value=1.2e+02 Score=19.27 Aligned_cols=30 Identities=17% Similarity=0.363 Sum_probs=17.7
Q ss_pred CCeeEEEEchhH-HHHHHHHHhCc--ccccceEEe
Q psy1324 59 NRCILIGRDFGG-SLVWSFLDKYP--ELVVKSIII 90 (115)
Q Consensus 59 ~~~~lvg~S~Gg-~~a~~~~~~~~--~~v~~~v~~ 90 (115)
+..++||||+-- .-++.+. +| .-++..++.
T Consensus 101 ~~tILVGHsL~nDL~aL~l~--hp~~~viDTa~l~ 133 (174)
T cd06143 101 LGCIFVGHGLAKDFRVINIQ--VPKEQVIDTVELF 133 (174)
T ss_pred CCCEEEeccchhHHHHhcCc--CCCcceEEcHHhc
Confidence 567999999986 3344443 34 334444443
No 349
>cd01014 nicotinamidase_related Nicotinamidase_ related amidohydrolases. Cysteine hydrolases of unknown function that share the catalytic triad with other amidohydrolases, like nicotinamidase, which converts nicotinamide to nicotinic acid and ammonia.
Probab=23.69 E-value=1.8e+02 Score=17.49 Aligned_cols=47 Identities=9% Similarity=0.071 Sum_probs=28.9
Q ss_pred HHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhCcccccceEEecCC
Q psy1324 47 DSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVP 93 (115)
Q Consensus 47 ~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~ 93 (115)
..+.+++++.+.+.++++|-+....+..........-.+-.+..++.
T Consensus 88 t~l~~~L~~~gi~~viv~G~~td~CV~~Ta~~a~~~g~~v~vi~Da~ 134 (155)
T cd01014 88 TDLEEWLREAGIDHLVICGAMTEMCVDTTVRSAFDLGYDVTVVADAC 134 (155)
T ss_pred CCHHHHHHHCCCCEEEEEeeccchhHHHHHHHHHHCCCcEEEecccc
Confidence 35677788888899999998876554444333322234444544443
No 350
>cd03818 GT1_ExpC_like This family is most closely related to the GT1 family of glycosyltransferases. ExpC in Rhizobium meliloti has been shown to be involved in the biosynthesis of galactoglucan (exopolysaccharide II).
Probab=23.65 E-value=1.6e+02 Score=20.56 Aligned_cols=33 Identities=15% Similarity=0.170 Sum_probs=22.3
Q ss_pred CEeecCCCCCHhhHHHHHHhhhC-CceEEEecCCCC
Q psy1324 1 MLFLHGFPESWYIWKHQMSEFSH-EYWTVAVDIKTN 35 (115)
Q Consensus 1 vl~~hG~~~~~~~~~~~~~~l~~-~~~v~~~d~~g~ 35 (115)
|+|+|..... .|+++.+.|.+ |+.|..+...+.
T Consensus 2 il~~~~~~p~--~~~~la~~L~~~G~~v~~~~~~~~ 35 (396)
T cd03818 2 ILFVHQNFPG--QFRHLAPALAAQGHEVVFLTEPNA 35 (396)
T ss_pred EEEECCCCch--hHHHHHHHHHHCCCEEEEEecCCC
Confidence 5788877543 36788888865 888877654433
No 351
>PRK15416 lipopolysaccharide core heptose(II)-phosphate phosphatase; Provisional
Probab=23.17 E-value=1e+02 Score=19.98 Aligned_cols=27 Identities=4% Similarity=0.085 Sum_probs=19.0
Q ss_pred HHHHHHHHHHHhCCCCeeEEEEchhHH
Q psy1324 45 LVDSLKVFLDHLGRNRCILIGRDFGGS 71 (115)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~lvg~S~Gg~ 71 (115)
..+.+.++++....+.+.++||+-|=.
T Consensus 138 ~~~~i~~~i~~~~~~tVLIVGHnp~i~ 164 (201)
T PRK15416 138 IYSAIKDLQRKSPDKNIVIFTHNHCLT 164 (201)
T ss_pred hHHHHHHHHHhCCCCEEEEEeCchhHH
Confidence 344446666666667899999998843
No 352
>PF02882 THF_DHG_CYH_C: Tetrahydrofolate dehydrogenase/cyclohydrolase, NAD(P)-binding domain; InterPro: IPR020631 Enzymes that participate in the transfer of one-carbon units require the coenzyme tetrahydrofolate (THF). Various reactions generate one-carbon derivatives of THF, which can be interconverted between different oxidation states by methylene-THF dehydrogenase (1.5.1.5 from EC), methenyl-THF cyclohydrolase (3.5.4.9 from EC) and formyl-THF synthetase (6.3.4.3 from EC) [, ]. The dehydrogenase and cyclohydrolase activities are expressed by a variety of multifunctional enzymes, including the tri-functional eukaryotic C1-tetrahydrofolate synthase []; a bifunctional eukaryotic mitochondrial protein; and the bifunctional Escherichia coli folD protein [, ]. Methylene-tetrahydrofolate dehydrogenase and methenyltetrahydrofolate cyclo-hydrolase share an overlapping active site [], and as such are usually located together in proteins, acting in tandem on the carbon-nitrogen bonds of substrates other than peptide bonds. This entry represents the NAD(P)-binding domain found in these enzymes.; GO: 0003824 catalytic activity, 0004488 methylenetetrahydrofolate dehydrogenase (NADP+) activity, 0009396 folic acid-containing compound biosynthetic process, 0055114 oxidation-reduction process; PDB: 1B0A_A 2C2X_B 2C2Y_A 3NGL_C 3NGX_A 4A26_B 1EDZ_A 1EE9_A 3P2O_B 1DIA_A ....
Probab=23.11 E-value=2e+02 Score=17.86 Aligned_cols=36 Identities=22% Similarity=0.425 Sum_probs=24.6
Q ss_pred hHHHHHHHHHHHhC----CCCeeEEEEc--hhHHHHHHHHHh
Q psy1324 44 FLVDSLKVFLDHLG----RNRCILIGRD--FGGSLVWSFLDK 79 (115)
Q Consensus 44 ~~~~~~~~~~~~~~----~~~~~lvg~S--~Gg~~a~~~~~~ 79 (115)
.-+..+.+++++.+ .+++.++|.| .|-.++..+..+
T Consensus 18 cTp~aii~lL~~~~~~l~Gk~v~VvGrs~~VG~Pla~lL~~~ 59 (160)
T PF02882_consen 18 CTPLAIIELLEYYGIDLEGKKVVVVGRSNIVGKPLAMLLLNK 59 (160)
T ss_dssp HHHHHHHHHHHHTT-STTT-EEEEE-TTTTTHHHHHHHHHHT
T ss_pred CCHHHHHHHHHhcCCCCCCCEEEEECCcCCCChHHHHHHHhC
Confidence 45667778888765 3689999999 567777776665
No 353
>KOG1533|consensus
Probab=23.10 E-value=2.2e+02 Score=19.43 Aligned_cols=71 Identities=11% Similarity=0.094 Sum_probs=35.3
Q ss_pred HhhhCCceEEEecCCCCCCC-ccch-hhHHHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHhCc--------ccccceE
Q psy1324 19 SEFSHEYWTVAVDIKTNFRT-IADR-YFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYP--------ELVVKSI 88 (115)
Q Consensus 19 ~~l~~~~~v~~~d~~g~g~s-~~~~-~~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~~--------~~v~~~v 88 (115)
..+.+...++..|....+-. +... ....-.+..++++++..| -+|...+++++..+= ..-+..+
T Consensus 27 s~~gr~~~vVNLDPaNd~~~Y~~~v~I~elit~edvm~~~~LGP------Ng~l~yc~E~l~~~idwl~~~l~~~~~~Y~ 100 (290)
T KOG1533|consen 27 SAIGRPVAVVNLDPANDNLPYECAVDIRELITVEDVMEELGLGP------NGALKYCMEYLEANIDWLLEKLKPLTDHYV 100 (290)
T ss_pred HHhCCceEEEecCCcccCCCCCCcccHHHHccHHHHHHHhCCCC------chhHHHHHHHHHhhhHHHHHHhhhccCcEE
Confidence 33333455666666544333 1111 133445566677776554 344444555544431 1355677
Q ss_pred EecCCCC
Q psy1324 89 IINVPHP 95 (115)
Q Consensus 89 ~~~~~~~ 95 (115)
++++|.-
T Consensus 101 lFDcPGQ 107 (290)
T KOG1533|consen 101 LFDCPGQ 107 (290)
T ss_pred EEeCCCc
Confidence 7887753
No 354
>PF13614 AAA_31: AAA domain; PDB: 2VED_B 2PH1_A 3EA0_B 3FKQ_A 3KB1_B 1ION_A 3LA6_H 3BFV_B 3CIO_D.
Probab=23.10 E-value=44 Score=19.75 Aligned_cols=24 Identities=13% Similarity=0.176 Sum_probs=17.9
Q ss_pred hhHHHHHHhhhCCceEEEecCCCC
Q psy1324 12 YIWKHQMSEFSHEYWTVAVDIKTN 35 (115)
Q Consensus 12 ~~~~~~~~~l~~~~~v~~~d~~g~ 35 (115)
+.+..+++.+.+.|.++.+|.+..
T Consensus 105 ~~~~~li~~l~~~yd~IivD~~~~ 128 (157)
T PF13614_consen 105 EDVEELIDALKEHYDYIIVDLPSS 128 (157)
T ss_dssp HHHHHHHHHHHHHSSEEEEEEEST
T ss_pred HHHHHHHHHHHHcCCEEEEECcCC
Confidence 345666777777899999998765
No 355
>PF01494 FAD_binding_3: FAD binding domain; InterPro: IPR002938 Monooxygenases incorporate one hydroxyl group into substrates and are found in many metabolic pathways. In this reaction, two atoms of dioxygen are reduced to one hydroxyl group and one H2O molecule by the concomitant oxidation of NAD(P)H []. P-hydroxybenzoate hydroxylase from Pseudomonas fluorescens contains this sequence motif (present in in flavoprotein hydroxylases) with a putative dual function in FAD and NADPH binding [].; PDB: 2Y6R_B 2XYO_C 2Y6Q_C 3P9U_D 2XDO_C 1FOH_D 1PN0_A 3IHG_C 2QA2_A 2VOU_C ....
Probab=23.02 E-value=94 Score=20.85 Aligned_cols=22 Identities=14% Similarity=0.087 Sum_probs=17.3
Q ss_pred CeeEEEEchhHHHHHHHHHhCc
Q psy1324 60 RCILIGRDFGGSLVWSFLDKYP 81 (115)
Q Consensus 60 ~~~lvg~S~Gg~~a~~~~~~~~ 81 (115)
+|.++|-+.+|..+..++.+..
T Consensus 3 dV~IvGaG~aGl~~A~~L~~~G 24 (356)
T PF01494_consen 3 DVAIVGAGPAGLAAALALARAG 24 (356)
T ss_dssp EEEEE--SHHHHHHHHHHHHTT
T ss_pred eEEEECCCHHHHHHHHHHHhcc
Confidence 5789999999999999988863
No 356
>PF04084 ORC2: Origin recognition complex subunit 2 ; InterPro: IPR007220 The Origin Recognition Complex (ORC) is a six-subunit ATP-dependent DNA-binding complex encoded in yeast by ORC1-6 []. ORC is a central component for eukaryotic DNA replication, and binds chromatin at replication origins throughout the cell cycle []. ORC directs DNA replication throughout the genome and is required for its initiation [, , ]. ORC bound at replication origins serves as the foundation for assembly of the pre-replicative complex (pre-RC), which includes Cdc6, Tah11 (aka Cdt1), and the Mcm2-7 complex [, , ]. Pre-RC assembly during G1 is required for replication licensing of chromosomes prior to DNA synthesis during S phase [, , ]. Cell cycle-regulated phosphorylation of Orc2, Orc6, Cdc6, and MCM by the cyclin-dependent protein kinase Cdc28 regulates initiation of DNA replication, including blocking reinitiation in G2/M phase [, , , ]. In yeast, ORC also plays a role in the establishment of silencing at the mating-type loci Hidden MAT Left (HML) and Hidden MAT Right (HMR) [, , ]. ORC participates in the assembly of transcriptionally silent chromatin at HML and HMR by recruiting the Sir1 silencing protein to the HML and HMR silencers [, , ]. Both Orc1 and Orc5 bind ATP, though only Orc1 has ATPase activity []. The binding of ATP by Orc1 is required for ORC binding to DNA and is essential for cell viability []. The ATPase activity of Orc1 is involved in formation of the pre-RC [, , ]. ATP binding by Orc5 is crucial for the stability of ORC as a whole. Only the Orc1-5 subunits are required for origin binding; Orc6 is essential for maintenance of pre-RCs once formed []. Interactions within ORC suggest that Orc2-3-6 may form a core complex []. ORC homologues have been found in various eukaryotes, including fission yeast, insects, amphibians, and humans []. This entry represents subunit 2, which binds the origin of replication. It plays a role in chromosome replication and mating type transcriptional silencing.; GO: 0006260 DNA replication, 0000808 origin recognition complex, 0005634 nucleus
Probab=22.87 E-value=2.8e+02 Score=19.45 Aligned_cols=71 Identities=11% Similarity=0.089 Sum_probs=43.7
Q ss_pred EeecCCCCCHhhHHHHHHhhhCC---ceEEEecC--CCCCCC-----------cc-chh-----hHHHHHHHHHHHhC-C
Q psy1324 2 LFLHGFPESWYIWKHQMSEFSHE---YWTVAVDI--KTNFRT-----------IA-DRY-----FLVDSLKVFLDHLG-R 58 (115)
Q Consensus 2 l~~hG~~~~~~~~~~~~~~l~~~---~~v~~~d~--~g~g~s-----------~~-~~~-----~~~~~~~~~~~~~~-~ 58 (115)
|+++|+|.=....+.+.+..-.. ..++.++- |+.... +. ... +.++.+...++... .
T Consensus 57 lL~YG~GSKr~lL~~Fa~~~l~~~~~~~~vvvnGy~p~~~~k~il~~I~~~l~~~~~~~~~~~~~~~~~i~~~l~~~~~~ 136 (326)
T PF04084_consen 57 LLFYGYGSKRKLLNDFAEKYLSDWGDGPVVVVNGYFPSLSIKDILNTIEEALLPEPSKKPKSPSEQLDFIISYLESRPSP 136 (326)
T ss_pred EEEEecChHHHHHHHHHHHHhhccCCCcEEEEEccCCCCcHHHHHHHHHHHHhhhcccccCCHHHHHHHHHHHHhccCCC
Confidence 68899998888888888876443 77877763 332111 00 000 33444444444443 4
Q ss_pred CCeeEEEEchhHHH
Q psy1324 59 NRCILIGRDFGGSL 72 (115)
Q Consensus 59 ~~~~lvg~S~Gg~~ 72 (115)
.+++++=|+.=|..
T Consensus 137 ~~l~lvIHnIDg~~ 150 (326)
T PF04084_consen 137 PPLYLVIHNIDGPS 150 (326)
T ss_pred CceEEEEECCCChh
Confidence 68999999987765
No 357
>PF02590 SPOUT_MTase: Predicted SPOUT methyltransferase; InterPro: IPR003742 This family of proteins are predicted to be SPOUT methyltransferases []. ; GO: 0008168 methyltransferase activity, 0006364 rRNA processing, 0005737 cytoplasm; PDB: 1VH0_E 4FAK_A 1TO0_G 1O6D_A 1NS5_B.
Probab=22.71 E-value=2e+02 Score=17.73 Aligned_cols=86 Identities=10% Similarity=0.124 Sum_probs=39.4
Q ss_pred HHHhhhCCceEEEecCCCCCCCccchhhHHHHHHHHHHHhCCCC-eeEEEEchhHHHHHHHHHhCcccccceEEecCCCC
Q psy1324 17 QMSEFSHEYWTVAVDIKTNFRTIADRYFLVDSLKVFLDHLGRNR-CILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHP 95 (115)
Q Consensus 17 ~~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~-~~lvg~S~Gg~~a~~~~~~~~~~v~~~v~~~~~~~ 95 (115)
+...+.++-.+++.|..|--.+.. ++++.+...... +..+ ++++|-+.|=. -.+.. +.+..+.++..+.
T Consensus 60 il~~i~~~~~~i~Ld~~Gk~~sS~---~fA~~l~~~~~~-g~~~i~F~IGG~~G~~--~~~~~----~a~~~lSLS~mTf 129 (155)
T PF02590_consen 60 ILKKIPPNDYVILLDERGKQLSSE---EFAKKLERWMNQ-GKSDIVFIIGGADGLS--EEVRK----RADEKLSLSKMTF 129 (155)
T ss_dssp HHCTSHTTSEEEEE-TTSEE--HH---HHHHHHHHHHHT-TS-EEEEEE-BTTB----HHHHH----H-SEEEES-SS--
T ss_pred HHhhccCCCEEEEEcCCCccCChH---HHHHHHHHHHhc-CCceEEEEEecCCCCC--HHHHh----hcCceEEEecCCC
Confidence 334445566788888877644411 344444444433 3333 56699888832 22222 2445566776665
Q ss_pred hhHHHHHHhhhhhhhcc
Q psy1324 96 AVFKQELKKMSQLIKTR 112 (115)
Q Consensus 96 ~~~~~~~~~~~~~~~~~ 112 (115)
+.....+--..|+.|.+
T Consensus 130 pH~larlvL~EQiYRA~ 146 (155)
T PF02590_consen 130 PHQLARLVLLEQIYRAF 146 (155)
T ss_dssp -HHHHHHHHHHHHHHHH
T ss_pred cHHHHHHHHHHHHHHHH
Confidence 55544444355655543
No 358
>COG3887 Predicted signaling protein consisting of a modified GGDEF domain and a DHH domain [Signal transduction mechanisms]
Probab=22.68 E-value=3.7e+02 Score=20.90 Aligned_cols=46 Identities=7% Similarity=0.196 Sum_probs=30.8
Q ss_pred HHHHHHHHHHhCCCCeeEEEE------chhHHHHHHHHHhCcccccceEEecCCC
Q psy1324 46 VDSLKVFLDHLGRNRCILIGR------DFGGSLVWSFLDKYPELVVKSIIINVPH 94 (115)
Q Consensus 46 ~~~~~~~~~~~~~~~~~lvg~------S~Gg~~a~~~~~~~~~~v~~~v~~~~~~ 94 (115)
...+.+++.. .++++++|| +.|+.+++...+..-.+ .+.+.+++.-
T Consensus 327 s~al~d~i~e--~d~VfImGHk~pDmDalGsAig~~~~A~~~~~-~a~~v~dp~~ 378 (655)
T COG3887 327 STALSDIIKE--SDNVFIMGHKFPDMDALGSAIGMQKFASMNNK-EAFAVLDPED 378 (655)
T ss_pred HHHHHHHHhh--cCcEEEEccCCCChHHHHHHHHHHHHHHhccc-ccEEEECccc
Confidence 3334444433 589999999 67988888777775554 6667777553
No 359
>PF15566 Imm18: Immunity protein 18
Probab=22.60 E-value=99 Score=15.39 Aligned_cols=26 Identities=23% Similarity=0.339 Sum_probs=18.0
Q ss_pred HHHHHHHHHHhCCCCeeEEEEchhHH
Q psy1324 46 VDSLKVFLDHLGRNRCILIGRDFGGS 71 (115)
Q Consensus 46 ~~~~~~~~~~~~~~~~~lvg~S~Gg~ 71 (115)
.+++..+..+...+.++++.-||||.
T Consensus 8 ~~~l~~L~~~~~~~H~Hlmtp~WgG~ 33 (52)
T PF15566_consen 8 QDQLENLQEKEPFDHEHLMTPDWGGE 33 (52)
T ss_pred HHHHHHHHhccCCCCceecccccccc
Confidence 44455555554567889999999986
No 360
>COG4100 Cystathionine beta-lyase family protein involved in aluminum resistance [Inorganic ion transport and metabolism]
Probab=22.58 E-value=2.9e+02 Score=19.63 Aligned_cols=62 Identities=6% Similarity=0.049 Sum_probs=36.9
Q ss_pred HhhHHHHHHhhhCCceEEEecCC-CCCCCccchhhHHHHHHHHHHHhCCCCeeEEEEchhHHH
Q psy1324 11 WYIWKHQMSEFSHEYWTVAVDIK-TNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGSL 72 (115)
Q Consensus 11 ~~~~~~~~~~l~~~~~v~~~d~~-g~g~s~~~~~~~~~~~~~~~~~~~~~~~~lvg~S~Gg~~ 72 (115)
.-+|+.+...+.+.-+++.+... |+++.|.-.....+.+..+++..+..-+.+|-.|+|-++
T Consensus 152 kiD~~~v~~~i~~~tkli~IQRS~GY~~RpS~~I~eI~~~i~~vk~inpn~ivFVDNCYGEFv 214 (416)
T COG4100 152 KIDIQAVKTAISDRTKLIGIQRSKGYAWRPSLSIAEIEEMITFVKEINPNVIVFVDNCYGEFV 214 (416)
T ss_pred cccHHHHHHhcCccceEEEEEeccCcCCCCcccHHHHHHHHHHHHhcCCCEEEEEeccchhhh
Confidence 34677777778878888888532 443333311144445555555555445666888888664
No 361
>PRK05723 flavodoxin; Provisional
Probab=22.35 E-value=1.8e+02 Score=17.68 Aligned_cols=7 Identities=14% Similarity=-0.016 Sum_probs=3.7
Q ss_pred CCeeEEE
Q psy1324 59 NRCILIG 65 (115)
Q Consensus 59 ~~~~lvg 65 (115)
.++.++|
T Consensus 85 ~~~aVfG 91 (151)
T PRK05723 85 LPGAVIA 91 (151)
T ss_pred CEEEEEe
Confidence 4555554
No 362
>KOG3086|consensus
Probab=21.77 E-value=2.7e+02 Score=19.04 Aligned_cols=53 Identities=23% Similarity=0.271 Sum_probs=36.3
Q ss_pred hHHHHHHHHHHHhCCC----CeeE---EEEchhHHHHHHH-HHhCcccccceEEecCCCCh
Q psy1324 44 FLVDSLKVFLDHLGRN----RCIL---IGRDFGGSLVWSF-LDKYPELVVKSIIINVPHPA 96 (115)
Q Consensus 44 ~~~~~~~~~~~~~~~~----~~~l---vg~S~Gg~~a~~~-~~~~~~~v~~~v~~~~~~~~ 96 (115)
++.+++..++...+.+ +.++ .|.++-|-.|... ....|..++++.+++|.+..
T Consensus 21 ~Ls~QL~~wL~~~~~~~~paRaiIaPHAGY~YcG~~Aa~ay~qvdps~v~RIFILGPSHHv 81 (296)
T KOG3086|consen 21 QLSAQLEGWLSQVTLTKGPARAIIAPHAGYTYCGSCAAYAYKQVDPSNVQRIFILGPSHHV 81 (296)
T ss_pred HHHHHHHHHHhccCCCCCCceEEEcCCCCcccchHHHHHHHhhcChhHeeEEEEecCccee
Confidence 6777888888776532 4444 5777766665544 44468889999999987643
No 363
>cd03378 beta_CA_cladeC Carbonic anhydrases (CA) are zinc-containing enzymes that catalyze the reversible hydration of carbon dioxide in a two-step mechanism in which the nucleophilic attack of a zinc-bound hydroxide ion on carbon dioxide is followed by the regeneration of an active site by ionization of the zinc-bound water molecule and removal of a proton from the active site. CAs are ubiquitous enzymes involved in fundamental processes like photosynthesis, respiration, pH homeostasis and ion transport. There are three evolutionarily distinct families of CAs (the alpha-, beta-, and gamma-CAs) which show no significant sequence identity or structural similarity. Within the beta-CA family there are four evolutionarily distinct clades (A through D). The beta-CAs are multimeric enzymes (forming dimers,tetramers,hexamers and octamers) which are present in higher plants, algae, fungi, archaea and prokaryotes.
Probab=21.75 E-value=1.2e+02 Score=18.73 Aligned_cols=29 Identities=21% Similarity=0.439 Sum_probs=20.4
Q ss_pred HHHHHHHHHHHhCCCCeeEEEEchhHHHH
Q psy1324 45 LVDSLKVFLDHLGRNRCILIGRDFGGSLV 73 (115)
Q Consensus 45 ~~~~~~~~~~~~~~~~~~lvg~S~Gg~~a 73 (115)
....+.-.+..++.+.++++||+-=|.+.
T Consensus 78 ~~~sl~yav~~l~v~~IvV~GHt~CG~~~ 106 (154)
T cd03378 78 VLGSLEYAVEVLGVPLVVVLGHESCGAVA 106 (154)
T ss_pred HHHHHHHHHHHhCCCEEEEEcCCCccHHH
Confidence 34455555667788999999999844433
No 364
>PF12242 Eno-Rase_NADH_b: NAD(P)H binding domain of trans-2-enoyl-CoA reductase; PDB: 3ZU5_A 3ZU3_A 3ZU4_A 3ZU2_A 3S8M_A.
Probab=21.69 E-value=1.5e+02 Score=16.09 Aligned_cols=22 Identities=18% Similarity=0.277 Sum_probs=15.2
Q ss_pred CCCeeEEEEchhHHHHHHHHHh
Q psy1324 58 RNRCILIGRDFGGSLVWSFLDK 79 (115)
Q Consensus 58 ~~~~~lvg~S~Gg~~a~~~~~~ 79 (115)
.+++.++|-|-|=.+|.+.+..
T Consensus 39 pK~VLViGaStGyGLAsRIa~a 60 (78)
T PF12242_consen 39 PKKVLVIGASTGYGLASRIAAA 60 (78)
T ss_dssp -SEEEEES-SSHHHHHHHHHHH
T ss_pred CceEEEEecCCcccHHHHHHHH
Confidence 4688889999997777665554
No 365
>PF03490 Varsurf_PPLC: Variant-surface-glycoprotein phospholipase C; InterPro: IPR003633 Variant-surface-glycoprotein phospholipase C, by hydrolysis of the attached glycolipid, releases soluble variant surface glycoprotein containing phosphoinositol from the cell wall after lysis. It catalyses the conversion of variant-surface-glycoprotein 1,2 didecanoyl-SN-phosphatidylinositol and water to 1,2-didecanoylglycerol and the soluble variant-surface-glycoprotein. It also cleaves similar membrane anchors on some mammalian proteins.; GO: 0047396 glycosylphosphatidylinositol diacylglycerol-lyase activity, 0006650 glycerophospholipid metabolic process
Probab=21.12 E-value=88 Score=15.41 Aligned_cols=22 Identities=9% Similarity=0.221 Sum_probs=18.9
Q ss_pred hHHHHHHHHHHHhCCCCeeEEE
Q psy1324 44 FLVDSLKVFLDHLGRNRCILIG 65 (115)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~lvg 65 (115)
.|..++...+..+.+..+.++|
T Consensus 10 SWM~DLrS~I~~~~I~ql~ipG 31 (51)
T PF03490_consen 10 SWMSDLRSSIGEMAITQLFIPG 31 (51)
T ss_pred HHHHHHHHHHhcceeeeEEecc
Confidence 6888899999888888888887
No 366
>TIGR02802 Pal_lipo peptidoglycan-associated lipoprotein. Members of this protein are Pal (also called OprL), the Peptidoglycan-Associated Lipoprotein of the Tol-Pal system. The system appears to be involved both in the maintenance of outer membrane integrity and in the import of certain organic molecules as nutrients. Members of this family contain a hydrodrophobic lipoprotein signal sequence, a conserved N-terminal cleavage and modification site, a poorly conserved low-complexity region, together comprising about 65 amino acids, and a well-conserved C-terminal domain. The seed alignment for this model includes only the conserved C-terminal domain.
Probab=21.08 E-value=1.6e+02 Score=16.17 Aligned_cols=24 Identities=17% Similarity=0.286 Sum_probs=17.8
Q ss_pred hHHHHHHHHHHHhCCCCeeEEEEc
Q psy1324 44 FLVDSLKVFLDHLGRNRCILIGRD 67 (115)
Q Consensus 44 ~~~~~~~~~~~~~~~~~~~lvg~S 67 (115)
..++.+...++......+.+.||+
T Consensus 17 ~~L~~~a~~l~~~~~~~i~I~Ght 40 (104)
T TIGR02802 17 AILDAHAAYLKKNPSVRVTIEGHT 40 (104)
T ss_pred HHHHHHHHHHHHCCCcEEEEEEec
Confidence 556667777776665578999997
No 367
>cd07199 Pat17_PNPLA8_PNPLA9_like Patatin-like phospholipase; includes PNPLA8, PNPLA9, and Pat17. Patatin is a storage protein of the potato tuber that shows Phospholipase A2 activity (PLA2; EC 3.1.1.4). Patatin catalyzes the nonspecific hydrolysis of phospholipids, glycolipids, sulfolipids, and mono- and diacylglycerols, thereby showing lipid acyl hydrolase activity. The active site includes an oxyanion hole with a conserved GGxR motif; it is found in almost all the members of this family. The catalytic dyad is formed by a serine and an aspartate. Patatin belongs to the alpha-beta hydrolase family which is identified by a characteristic nucleophile elbow with a consensus sequence of Sm-X-Nu-Sm (Sm = small residue, X = any residue and Nu = nucleophile). Members of this family have been found also in vertebrates. This family includes subfamily of PNPLA8 (iPLA2-gamma) and PNPLA9 (iPLA2-beta) like phospholipases from human as well as the Pat17 isozyme from Solanum cardiophyllum.
Probab=20.83 E-value=83 Score=20.73 Aligned_cols=18 Identities=17% Similarity=0.357 Sum_probs=16.1
Q ss_pred eEEEEchhHHHHHHHHHh
Q psy1324 62 ILIGRDFGGSLVWSFLDK 79 (115)
Q Consensus 62 ~lvg~S~Gg~~a~~~~~~ 79 (115)
.+.|-|.||.++..++..
T Consensus 37 ~i~GtS~G~iia~~l~~~ 54 (258)
T cd07199 37 LIAGTSTGGIIALGLALG 54 (258)
T ss_pred eeeeccHHHHHHHHHhcC
Confidence 469999999999999887
No 368
>PRK05282 (alpha)-aspartyl dipeptidase; Validated
Probab=20.69 E-value=1e+02 Score=20.44 Aligned_cols=20 Identities=20% Similarity=0.227 Sum_probs=15.3
Q ss_pred CCeeEEEEchhHHHHHHHHH
Q psy1324 59 NRCILIGRDFGGSLVWSFLD 78 (115)
Q Consensus 59 ~~~~lvg~S~Gg~~a~~~~~ 78 (115)
+...++|.|.|+.++.....
T Consensus 112 ~G~~~~G~SAGAii~~~~i~ 131 (233)
T PRK05282 112 NGTPYIGWSAGANVAGPTIR 131 (233)
T ss_pred CCCEEEEECHHHHhhhccce
Confidence 34789999999988666443
No 369
>PF00117 GATase: Glutamine amidotransferase class-I; InterPro: IPR017926 Glutamine amidotransferase (GATase) enzymes catalyse the removal of the ammonia group from glutamine and then transfer this group to a substrate to form a new carbon-nitrogen group []. The GATase domain exists either as a separate polypeptidic subunit or as part of a larger polypeptide fused in different ways to a synthase domain. Two classes of GATase domains have been identified [, ]: class-I (also known as trpG-type or triad) and class-II (also known as purF-type or Ntn). Class-I (or type 1) GATase domains have been found in the following enzymes: The second component of anthranilate synthase (AS) []. AS catalyzes the biosynthesis of anthranilate from chorismate and glutamine. AS is generally a dimeric enzyme: the first component can synthesize anthranilate using ammonia rather than glutamine, whereas component II provides the GATase activity []. In some bacteria and in fungi the GATase component of AS is part of a multifunctional protein that also catalyzes other steps of the biosynthesis of tryptophan. The second component of 4-amino-4-deoxychorismate (ADC) synthase, a dimeric prokaryotic enzyme that functions in the pathway that catalyzes the biosynthesis of para-aminobenzoate (PABA) from chorismate and glutamine. The second component (gene pabA) provides the GATase activity []. CTP synthase. CTP synthase catalyzes the final reaction in the biosynthesis of pyrimidine, the ATP-dependent formation of CTP from UTP and glutamine. CTP synthase is a single chain enzyme that contains two distinct domains; the GATase domain is in the C-terminal section []. GMP synthase (glutamine-hydrolyzing). GMP synthase catalyzes the ATP-dependent formation of GMP from xanthosine 5'-phosphate and glutamine. GMP synthase is a single chain enzyme that contains two distinct domains; the GATase domain is in the N-terminal section [, ]. Glutamine-dependent carbamoyl-phosphate synthase (GD-CPSase); an enzyme involved in both arginine and pyrimidine biosynthesis and which catalyzes the ATP-dependent formation of carbamoyl phosphate from glutamine and carbon dioxide. In bacteria GD-CPSase is composed of two subunits: the large chain (gene carB) provides the CPSase activity, while the small chain (gene carA) provides the GATase activity. In yeast the enzyme involved in arginine biosynthesis is also composed of two subunits: CPA1 (GATase), and CPA2 (CPSase). In most eukaryotes, the first three steps of pyrimidine biosynthesis are catalyzed by a large multifunctional enzyme (called URA2 in yeast, rudimentary in Drosophila, and CAD in mammals). The GATase domain is located at the N-terminal extremity of this polyprotein []. Phosphoribosylformylglycinamidine synthase, an enzyme that catalyzes the fourth step in the de novo biosynthesis of purines. In some species of bacteria and rchaea, FGAM synthase II is composed of two subunits: a small chain (gene purQ) which provides the GATase activity and a large chain (gene purL) which provides the aminator activity. In eukaryotes and Gram-negative bacteria a single polypeptide (large type of purL) contains a FGAM synthethase domain and the GATase as the C-terminal domain []. Imidazole glycerol phosphate synthase subunit hisH, an enzyme that catalyzes the fifth step in the biosynthesis of histidine. A triad of conserved Cys-His-Glu forms the active site, wherein the catalytic cysteine is essential for the amidotransferase activity [, ]. Different structures show that the active site Cys of type 1 GATase is located at the tip of a nucleophile elbow.; PDB: 1I7S_D 1I7Q_D 3UOW_B 1GPM_C 1O1Y_A 2VXO_A 2VPI_B 1OX5_B 1OX6_B 1OX4_B ....
Probab=20.61 E-value=1.5e+02 Score=18.37 Aligned_cols=34 Identities=12% Similarity=0.238 Sum_probs=23.3
Q ss_pred HHHHHHHHHHhCCCCeeEEEEchhHHHHHHHHHh
Q psy1324 46 VDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDK 79 (115)
Q Consensus 46 ~~~~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~ 79 (115)
......+++.+-..++=++|.|+|.++....+-.
T Consensus 58 ~~~~~~~i~~~~~~~~PilGIC~G~Q~la~~~G~ 91 (192)
T PF00117_consen 58 IEGLIELIREARERKIPILGICLGHQILAHALGG 91 (192)
T ss_dssp HHHHHHHHHHHHHTTSEEEEETHHHHHHHHHTTH
T ss_pred ccccccccccccccceEEEEEeehhhhhHHhcCC
Confidence 4445555555433567789999999987777655
No 370
>cd03131 GATase1_HTS Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). Type 1 glutamine amidotransferase (GATase1)-like domain found in homoserine trans-succinylase (HTS). HTS, the first enzyme in methionine biosynthesis in Escherichia coli, transfers a succinyl group from succinyl-CoA to homoserine forming succinyl homoserine. It has been suggested that the succinyl group of succinyl-CoA is initially transferred to an enzyme nucleophile before subsequent transfer to homoserine. The catalytic triad typical of GATase1 domains is not conserved in this GATase1-like domain. However, in common with GATase1 domains a reactive cys residue is found in the sharp turn between a beta strand and an alpha helix termed the nucleophile elbow. It has been proposed that this cys is in the active site of the molecule. However, as succinyl has been found bound to a conserved lysine residue, this conserved cys may play a role in dimer formation. HTS acti
Probab=20.50 E-value=41 Score=21.18 Aligned_cols=32 Identities=9% Similarity=0.007 Sum_probs=21.3
Q ss_pred HHHHHHHhCCCCeeEEEEchhHHHHHHHHHhC
Q psy1324 49 LKVFLDHLGRNRCILIGRDFGGSLVWSFLDKY 80 (115)
Q Consensus 49 ~~~~~~~~~~~~~~lvg~S~Gg~~a~~~~~~~ 80 (115)
+.++++.....-...++.|||++.++.++..-
T Consensus 87 l~~i~dwa~~~v~stl~iCWgaqaal~~~yGi 118 (175)
T cd03131 87 LTEILDWAKTHVTSTLFSCWAAMAALYYFYGI 118 (175)
T ss_pred HHHHHHHHHHhCcchHHHHHHHHHHHHHHcCc
Confidence 33444333323356789999999999988765
No 371
>PF13478 XdhC_C: XdhC Rossmann domain; PDB: 3ON5_A 2WE8_B 2WE7_A.
Probab=20.48 E-value=2.1e+02 Score=17.11 Aligned_cols=32 Identities=13% Similarity=0.129 Sum_probs=21.3
Q ss_pred EeecCCCCCHhhHHHHHHhhhCCceEEEecCCCC
Q psy1324 2 LFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTN 35 (115)
Q Consensus 2 l~~hG~~~~~~~~~~~~~~l~~~~~v~~~d~~g~ 35 (115)
|++-|.+........+...+ +|.|..+|.+.-
T Consensus 1 L~I~GaG~va~al~~la~~l--g~~v~v~d~r~e 32 (136)
T PF13478_consen 1 LVIFGAGHVARALARLAALL--GFRVTVVDPRPE 32 (136)
T ss_dssp EEEES-STCHHHHHHHHHHC--TEEEEEEES-CC
T ss_pred CEEEeCcHHHHHHHHHHHhC--CCEEEEEcCCcc
Confidence 45567777776666665555 899999998844
No 372
>PF05724 TPMT: Thiopurine S-methyltransferase (TPMT); InterPro: IPR008854 This family consists of thiopurine S-methyltransferase proteins from both eukaryotes and prokaryotes. Thiopurine S-methyltransferase (TPMT) is a cytosolic enzyme that catalyses S-methylation of aromatic and heterocyclic sulphydryl compounds, including anticancer and immunosuppressive thiopurines [].; GO: 0008119 thiopurine S-methyltransferase activity, 0008152 metabolic process, 0005737 cytoplasm; PDB: 1PJZ_A 2H11_A 2BZG_A 3LCC_A 3BGD_A 2GB4_A 3BGI_B.
Probab=20.22 E-value=1.1e+02 Score=19.93 Aligned_cols=6 Identities=0% Similarity=-0.391 Sum_probs=3.3
Q ss_pred CCCCCC
Q psy1324 33 KTNFRT 38 (115)
Q Consensus 33 ~g~g~s 38 (115)
||+|.+
T Consensus 44 PgCG~g 49 (218)
T PF05724_consen 44 PGCGKG 49 (218)
T ss_dssp TTTTTS
T ss_pred eCCCCh
Confidence 455555
No 373
>TIGR00347 bioD dethiobiotin synthase. Dethiobiotin synthase is involved in biotin biosynthesis and catalyses the reaction (CO2 + 7,8-diaminononanoate + ATP = dethiobiotin + phosphate + ADP). The enzyme binds ATP (see motif in first 12 residues of the SEED alignment) and requires magnesium as a co-factor.
Probab=20.16 E-value=2.1e+02 Score=17.13 Aligned_cols=51 Identities=10% Similarity=0.070 Sum_probs=26.6
Q ss_pred HHhhhCCceEEEecCCCCCCCccchhhHHHHHHHHHHHhCCCCeeEEEEchhHH
Q psy1324 18 MSEFSHEYWTVAVDIKTNFRTIADRYFLVDSLKVFLDHLGRNRCILIGRDFGGS 71 (115)
Q Consensus 18 ~~~l~~~~~v~~~d~~g~g~s~~~~~~~~~~~~~~~~~~~~~~~~lvg~S~Gg~ 71 (115)
.+.+.++|.++.+|-+|...+|... .....++++.++.+-+.++..+.|..
T Consensus 93 ~~~l~~~~D~viid~~g~~~~~~~~---~~~~~dl~~~~~~~vilV~~~~~~~~ 143 (166)
T TIGR00347 93 LRTLEQKYDFVLVEGAGGLCVPITE---EYTTADLIKLLQLPVILVVRVKLGTI 143 (166)
T ss_pred HHHHHhcCCEEEEEcCCccccCCCC---CCcHHHHHHHhCCCEEEEECCCCcHH
Confidence 3445568999999988743222211 11123344556544444455555553
Done!