RPS-BLAST 2.2.26 [Sep-21-2011]
Database: scop70_1_75
13,730 sequences; 2,407,596 total letters
Searching..................................................done
Query= psy1324
(115 letters)
>d1cvla_ c.69.1.18 (A:) Lipase {Chromobacterium viscosum [TaxId:
42739]}
Length = 319
Score = 51.0 bits (121), Expect = 2e-09
Identities = 20/104 (19%), Positives = 30/104 (28%), Gaps = 10/104 (9%)
Query: 2 LFLHGFPESWYI------WKHQMSEFS-HEYWTVAVDIKTNFRTIADRYF---LVDSLKV 51
+ +HG + W S+ H ++ L+ +K
Sbjct: 12 ILVHGLAGTDKFANVVDYWYGIQSDLQSHGAKVYVANLSGFQSDDGPNGRGEQLLAYVKQ 71
Query: 52 FLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHP 95
L G + LIG GG P+LV I PH
Sbjct: 72 VLAATGATKVNLIGHSQGGLTSRYVAAVAPQLVASVTTIGTPHR 115
>d1ex9a_ c.69.1.18 (A:) Lipase {Pseudomonas aeruginosa [TaxId: 287]}
Length = 285
Score = 49.0 bits (116), Expect = 1e-08
Identities = 16/100 (16%), Positives = 31/100 (31%), Gaps = 6/100 (6%)
Query: 2 LFLHGFPESWYI-----WKHQMSEFS-HEYWTVAVDIKTNFRTIADRYFLVDSLKVFLDH 55
+ HG I W S ++ + L+ ++ +
Sbjct: 11 VLAHGMLGFDNILGVDYWFGIPSALRRDGAQVYVTEVSQLDTSEVRGEQLLQQVEEIVAL 70
Query: 56 LGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHP 95
G+ + LIG GG + P+L+ + + PH
Sbjct: 71 SGQPKVNLIGHSHGGPTIRYVAAVRPDLIASATSVGAPHK 110
>d1pjaa_ c.69.1.13 (A:) Palmitoyl protein thioesterase 2 {Human
(Homo sapiens) [TaxId: 9606]}
Length = 268
Score = 45.5 bits (106), Expect = 2e-07
Identities = 17/107 (15%), Positives = 38/107 (35%), Gaps = 7/107 (6%)
Query: 2 LFLHGFPESWYIWKHQMSEFS---HEYWTVAVDI---KTNFRTIADRYFLVDSLKVFLDH 55
+ +HG +S Y ++H + + +D+ + + R + ++ V +
Sbjct: 6 IVVHGLFDSSYSFRHLLEYINETHPGTVVTVLDLFDGRESLRPLWEQVQGFREAVVPIMA 65
Query: 56 LGRNRCILIGRDFGGSLVWSFLDKYPELVVKS-IIINVPHPAVFKQE 101
LI GG + + L + V S I ++ P +
Sbjct: 66 KAPQGVHLICYSQGGLVCRALLSVMDDHNVDSFISLSSPQMGQYGDT 112
>d1tcaa_ c.69.1.17 (A:) Triacylglycerol lipase {Yeast (Candida
antarctica), form b [TaxId: 34362]}
Length = 317
Score = 44.3 bits (104), Expect = 5e-07
Identities = 11/101 (10%), Positives = 29/101 (28%), Gaps = 8/101 (7%)
Query: 2 LFLHGFPESWYI-WKHQMSEF--SHEYWTVAVDIKTNFRTIADRY--FLVDSLKVFLDHL 56
L + G + + Y + ++V+++
Sbjct: 35 LLVPGTGTTGPQSFDSNWIPLSTQLGYTPCWISPPPFMLNDTQVNTEYMVNAITALYAGS 94
Query: 57 GRNRCILIGRDFGGSLVWSFLDKYPEL---VVKSIIINVPH 94
G N+ ++ GG + L +P + V + + +
Sbjct: 95 GNNKLPVLTWSQGGLVAQWGLTFFPSIRSKVDRLMAFAPDY 135
>d1ispa_ c.69.1.18 (A:) Lipase A {Bacillus subtilis [TaxId: 1423]}
Length = 179
Score = 42.6 bits (99), Expect = 1e-06
Identities = 12/108 (11%), Positives = 32/108 (29%), Gaps = 7/108 (6%)
Query: 2 LFLHGFPESWYIWKHQMSEFSHEYWTVAV-----DIKTNFRTIADRYFLVDSLKVFLDHL 56
+ +HG + + + S + W+ + L ++ LD
Sbjct: 6 VMVHGIGGASFNFAGIKSYLVSQGWSRDKLYAVDFWDKTGTNYNNGPVLSRFVQKVLDET 65
Query: 57 GRNRCILIGRDFGGSLVWSFLDKY--PELVVKSIIINVPHPAVFKQEL 102
G + ++ GG+ ++ V + + + + L
Sbjct: 66 GAKKVDIVAHSMGGANTLYYIKNLDGGNKVANVVTLGGANRLTTGKAL 113
>d1zd3a2 c.69.1.11 (A:225-547) Mammalian epoxide hydrolase,
C-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Length = 322
Score = 41.4 bits (95), Expect = 5e-06
Identities = 31/103 (30%), Positives = 43/103 (41%), Gaps = 8/103 (7%)
Query: 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAV--------DIKTNFRTIADRYFLVDSLKVF 52
+ HGFPESWY W++Q+ + + V L + F
Sbjct: 35 VCLCHGFPESWYSWRYQIPALAQAGYRVLAMDMKGYGESSAPPEIEEYCMEVLCKEMVTF 94
Query: 53 LDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHP 95
LD LG ++ + IG D+GG LVW YPE V +N P
Sbjct: 95 LDKLGLSQAVFIGHDWGGMLVWYMALFYPERVRAVASLNTPFI 137
>d1azwa_ c.69.1.7 (A:) Proline iminopeptidase {Xanthomonas
campestris, pv. citri [TaxId: 339]}
Length = 313
Score = 41.7 bits (96), Expect = 5e-06
Identities = 20/102 (19%), Positives = 41/102 (40%), Gaps = 7/102 (6%)
Query: 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRTIADRYF-------LVDSLKVFL 53
++ LHG P K + +Y V D + + R+ LV ++
Sbjct: 37 VVMLHGGPGGGCNDKMRRFHDPAKYRIVLFDQRGSGRSTPHADLVDNTTWDLVADIERLR 96
Query: 54 DHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHP 95
HLG +R + G +G +L ++ +P+ V + ++ +
Sbjct: 97 THLGVDRWQVFGGSWGSTLALAYAQTHPQQVTELVLRGIFLL 138
>d1bn7a_ c.69.1.8 (A:) Haloalkane dehalogenase {Rhodococcus sp.
[TaxId: 1831]}
Length = 291
Score = 40.6 bits (93), Expect = 1e-05
Identities = 25/110 (22%), Positives = 45/110 (40%), Gaps = 5/110 (4%)
Query: 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDI-----KTNFRTIADRYFLVDSLKVFLDH 55
+LFLHG P S Y+W++ + + + +A D+ V L F++
Sbjct: 32 VLFLHGNPTSSYLWRNIIPHVAPSHRCIAPDLIGMGKSDKPDLDYFFDDHVRYLDAFIEA 91
Query: 56 LGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHPAVFKQELKKM 105
LG +L+ D+G +L + + + PE V + P E +
Sbjct: 92 LGLEEVVLVIHDWGSALGFHWAKRNPERVKGIACMEFIRPIPTWDEWPEF 141
>d1wm1a_ c.69.1.7 (A:) Proline aminopeptidase {Serratia marcescens
[TaxId: 615]}
Length = 313
Score = 39.9 bits (91), Expect = 2e-05
Identities = 15/102 (14%), Positives = 37/102 (36%), Gaps = 7/102 (6%)
Query: 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRTIADRYFLVDSLKVFL------- 53
+F+HG P H+ Y + D + R+ ++ +
Sbjct: 37 AVFIHGGPGGGISPHHRQLFDPERYKVLLFDQRGCGRSRPHASLDNNTTWHLVADIERLR 96
Query: 54 DHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHP 95
+ G + ++ G +G +L ++ +PE V + ++ +
Sbjct: 97 EMAGVEQWLVFGGSWGSTLALAYAQTHPERVSEMVLRGIFTL 138
>d1mj5a_ c.69.1.8 (A:) Haloalkane dehalogenase {Sphingomonas
paucimobilis, UT26, LinB [TaxId: 13689]}
Length = 298
Score = 38.3 bits (87), Expect = 7e-05
Identities = 11/31 (35%), Positives = 17/31 (54%)
Query: 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVD 31
+LF HG P S Y+W++ M + +A D
Sbjct: 31 ILFQHGNPTSSYLWRNIMPHCAGLGRLIACD 61
>d1m33a_ c.69.1.26 (A:) Biotin biosynthesis protein BioH
{Escherichia coli [TaxId: 562]}
Length = 256
Score = 36.7 bits (83), Expect = 2e-04
Identities = 17/109 (15%), Positives = 39/109 (35%)
Query: 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRTIADRYFLVDSLKVFLDHLGRNR 60
++ LHG+ + +W+ E S + VD+ R+ + + + ++
Sbjct: 14 LVLLHGWGLNAEVWRCIDEELSSHFTLHLVDLPGFGRSRGFGALSLADMAEAVLQQAPDK 73
Query: 61 CILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHPAVFKQELKKMSQLI 109
I +G GG + +PE V + + + E + +
Sbjct: 74 AIWLGWSLGGLVASQIALTHPERVRALVTVASSPCFSARDEWPGIKPDV 122
>d1ehya_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Agrobacterium
radiobacter [TaxId: 358]}
Length = 293
Score = 35.7 bits (80), Expect = 6e-04
Identities = 9/38 (23%), Positives = 18/38 (47%)
Query: 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT 38
+L LHG+P W+ W + + Y + D++ +
Sbjct: 31 LLLLHGWPGFWWEWSKVIGPLAEHYDVIVPDLRGFGDS 68
>d1k8qa_ c.69.1.6 (A:) Gastric lipase {Dog (Canis familiaris)
[TaxId: 9615]}
Length = 377
Score = 35.4 bits (80), Expect = 6e-04
Identities = 16/123 (13%), Positives = 31/123 (25%), Gaps = 26/123 (21%)
Query: 2 LFLHGFPESWYIWKHQMSEFS-------HEYWTVAVDIKTNFRTIADR------------ 42
HG S W + S Y + + N +
Sbjct: 62 FLQHGLLASATNWISNLPNNSLAFILADAGYDVWLGNSRGNTWARRNLYYSPDSVEFWAF 121
Query: 43 -------YFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHP 95
Y L ++ L G+++ +G G ++ + P+L + P
Sbjct: 122 SFDEMAKYDLPATIDFILKKTGQDKLHYVGHSQGTTIGFIAFSTNPKLAKRIKTFYALAP 181
Query: 96 AVF 98
Sbjct: 182 VAT 184
>d1b6ga_ c.69.1.8 (A:) Haloalkane dehalogenase {Xanthobacter
autotrophicus [TaxId: 280]}
Length = 310
Score = 34.5 bits (77), Expect = 0.001
Identities = 21/104 (20%), Positives = 35/104 (33%), Gaps = 8/104 (7%)
Query: 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAV--------DIKTNFRTIADRYFLVDSLKVF 52
L LHG P Y+++ + F+ V K F + L
Sbjct: 50 FLCLHGEPTWSYLYRKMIPVFAESGARVIAPDFFGFGKSDKPVDEEDYTFEFHRNFLLAL 109
Query: 53 LDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHPA 96
++ L L+ +D+GG L + P + II+N
Sbjct: 110 IERLDLRNITLVVQDWGGFLGLTLPMADPSRFKRLIIMNACLMT 153
>d1r3da_ c.69.1.35 (A:) Hypothetical protein VC1974 {Vibrio
cholerae [TaxId: 666]}
Length = 264
Score = 32.2 bits (71), Expect = 0.008
Identities = 5/28 (17%), Positives = 11/28 (39%)
Query: 1 MLFLHGFPESWYIWKHQMSEFSHEYWTV 28
++ +HG S W+ +S +
Sbjct: 19 VVLVHGLLGSGADWQPVLSHLARTQCAA 46
>d1a88a_ c.69.1.12 (A:) Chloroperoxidase L {Streptomyces lividans
[TaxId: 1916]}
Length = 275
Score = 31.9 bits (70), Expect = 0.010
Identities = 14/32 (43%), Positives = 19/32 (59%), Gaps = 1/32 (3%)
Query: 1 MLFLHGFPESWYIWKHQMSEF-SHEYWTVAVD 31
++F HG+P S W +QM F SH Y +A D
Sbjct: 24 VVFHHGWPLSADDWDNQMLFFLSHGYRVIAHD 55
>d1a8sa_ c.69.1.12 (A:) Chloroperoxidase F {Pseudomonas
fluorescens [TaxId: 294]}
Length = 273
Score = 32.2 bits (71), Expect = 0.010
Identities = 8/28 (28%), Positives = 16/28 (57%)
Query: 1 MLFLHGFPESWYIWKHQMSEFSHEYWTV 28
++F HG+P + W+ QM + + + V
Sbjct: 22 IVFSHGWPLNADSWESQMIFLAAQGYRV 49
>d3c70a1 c.69.1.20 (A:2-257) Hydroxynitrile lyase {Rubber tree
(Hevea brasiliensis) [TaxId: 3981]}
Length = 256
Score = 31.8 bits (70), Expect = 0.011
Identities = 21/103 (20%), Positives = 36/103 (34%), Gaps = 8/103 (7%)
Query: 2 LFLHGFPESWYIWKHQMSEFSHEYWTV-AVDIK---TNFRTIADRYFLVDSLKVFLDHL- 56
+ +H +IW V A+D+ + R I + + + L L
Sbjct: 6 VLIHTICHGAWIWHKLKPLLEALGHKVTALDLAASGVDPRQIEEIGSFDEYSEPLLTFLE 65
Query: 57 ---GRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHPA 96
+ IL+G GG + DKY E + ++ N P
Sbjct: 66 ALPPGEKVILVGESCGGLNIAIAADKYCEKIAAAVFHNSVLPD 108
>d1brta_ c.69.1.12 (A:) Bromoperoxidase A2 {Streptomyces
aureofaciens [TaxId: 1894]}
Length = 277
Score = 31.8 bits (70), Expect = 0.013
Identities = 8/27 (29%), Positives = 14/27 (51%)
Query: 2 LFLHGFPESWYIWKHQMSEFSHEYWTV 28
+ +HGFP S + W+ Q + + V
Sbjct: 27 VLIHGFPLSGHSWERQSAALLDAGYRV 53
>d1a8qa_ c.69.1.12 (A:) Bromoperoxidase A1 {Streptomyces
aureofaciens [TaxId: 1894]}
Length = 274
Score = 31.8 bits (70), Expect = 0.013
Identities = 6/28 (21%), Positives = 14/28 (50%)
Query: 1 MLFLHGFPESWYIWKHQMSEFSHEYWTV 28
++F+HG+P + W+ Q+ +
Sbjct: 22 VVFIHGWPLNGDAWQDQLKAVVDAGYRG 49
>d1uk8a_ c.69.1.10 (A:) Meta-cleavage product hydrolase CumD
{Pseudomonas fluorescens [TaxId: 294]}
Length = 271
Score = 31.3 bits (69), Expect = 0.016
Identities = 7/33 (21%), Positives = 14/33 (42%), Gaps = 3/33 (9%)
Query: 2 LFLHGFP---ESWYIWKHQMSEFSHEYWTVAVD 31
+ +HG ++ W+ + S Y +A D
Sbjct: 27 ILIHGSGPGVSAYANWRLTIPALSKFYRVIAPD 59
>d1hkha_ c.69.1.12 (A:) Gamma-lactamase {Aureobacterium sp.
[TaxId: 51671]}
Length = 279
Score = 31.4 bits (69), Expect = 0.016
Identities = 7/27 (25%), Positives = 14/27 (51%)
Query: 2 LFLHGFPESWYIWKHQMSEFSHEYWTV 28
+ +HG+P + W+ Q E + + V
Sbjct: 27 VLIHGYPLDGHSWERQTRELLAQGYRV 53
>d1qlwa_ c.69.1.15 (A:) A novel bacterial esterase {Alcaligenes sp.
[TaxId: 512]}
Length = 318
Score = 31.3 bits (69), Expect = 0.017
Identities = 12/114 (10%), Positives = 29/114 (25%), Gaps = 15/114 (13%)
Query: 1 MLFLHGFPESWYIWKHQMSEFSH-------EYWTVAVDIKTNF------RTIADRYFLVD 47
+ +HG + W+ + ++ V ++ + + L
Sbjct: 61 ITLIHGCCLTGMTWETTPDGRMGWDEYFLRKGYSTYVIDQSGRGRSATDISAINAVKLGK 120
Query: 48 SLKVFLDHLGRN--RCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHPAVFK 99
+ L L FG +F D + ++ + P
Sbjct: 121 APASSLPDLFAAGHEAAWAIFRFGPRYPDAFKDTQFPVQAQAELWQQMVPDWLG 174
>d1xkla_ c.69.1.20 (A:) Salicylic acid-binding protein 2 (SABP2)
{Common tobacco (Nicotiana tabacum) [TaxId: 4097]}
Length = 258
Score = 31.4 bits (69), Expect = 0.018
Identities = 5/31 (16%), Positives = 10/31 (32%), Gaps = 1/31 (3%)
Query: 2 LFLHGFPESWYIWKHQMSEFS-HEYWTVAVD 31
+ +HG + W + A+D
Sbjct: 6 VLVHGACHGGWSWYKLKPLLEAAGHKVTALD 36
>d1va4a_ c.69.1.12 (A:) Arylesterase {Pseudomonas fluorescens
[TaxId: 294]}
Length = 271
Score = 31.0 bits (68), Expect = 0.021
Identities = 8/28 (28%), Positives = 14/28 (50%)
Query: 1 MLFLHGFPESWYIWKHQMSEFSHEYWTV 28
+LF HG+ +W++QM S +
Sbjct: 22 VLFSHGWLLDADMWEYQMEYLSSRGYRT 49
>d2dsta1 c.69.1.39 (A:2-123) Hypothetical protein TTHA1544 {Thermus
thermophilus [TaxId: 274]}
Length = 122
Score = 29.7 bits (66), Expect = 0.036
Identities = 11/87 (12%), Positives = 21/87 (24%), Gaps = 9/87 (10%)
Query: 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRTIADRYFLV---DSLKVFLDHLG 57
+L + W Y +D+ RT R + F +
Sbjct: 24 VLLVAEEASRWPEALP------EGYAFYLLDLPGYGRTEGPRMAPEELAHFVAGFAVMMN 77
Query: 58 RNRCILIGRDFGGSLVWSFLDKYPELV 84
++ R G +L +
Sbjct: 78 LGAPWVLLRGLGLALGPHLEALGLRAL 104
>d1mtza_ c.69.1.7 (A:) Tricorn interacting factor F1 {Archaeon
Thermoplasma acidophilum [TaxId: 2303]}
Length = 290
Score = 30.3 bits (66), Expect = 0.036
Identities = 6/28 (21%), Positives = 14/28 (50%)
Query: 1 MLFLHGFPESWYIWKHQMSEFSHEYWTV 28
++ +HG P + + + + + E TV
Sbjct: 28 LMTMHGGPGMSHDYLLSLRDMTKEGITV 55
>d1q0ra_ c.69.1.28 (A:) Aclacinomycin methylesterase RdmC
{Streptomyces purpurascens [TaxId: 1924]}
Length = 297
Score = 30.3 bits (66), Expect = 0.040
Identities = 12/108 (11%), Positives = 29/108 (26%), Gaps = 10/108 (9%)
Query: 1 MLFLHGFPESWYIWKHQMSEF--SHEYWTVAVD--------IKTNFRTIADRYFLVDSLK 50
+L + G S W + + + D + L
Sbjct: 25 LLLVMGGNLSALGWPDEFARRLADGGLHVIRYDHRDTGRSTTRDFAAHPYGFGELAADAV 84
Query: 51 VFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHPAVF 98
LD G +R ++G G ++ + + + ++ +
Sbjct: 85 AVLDGWGVDRAHVVGLSMGATITQVIALDHHDRLSSLTMLLGGGLDID 132
>d1j1ia_ c.69.1.10 (A:) Meta cleavage compound hydrolase CarC
{Janthinobacterium sp. J3 [TaxId: 213804]}
Length = 268
Score = 29.8 bits (65), Expect = 0.054
Identities = 8/39 (20%), Positives = 18/39 (46%), Gaps = 3/39 (7%)
Query: 2 LFLHGFP---ESWYIWKHQMSEFSHEYWTVAVDIKTNFR 37
+ +HG ES W++ + + Y +A+D+ +
Sbjct: 26 ILIHGGGAGAESEGNWRNVIPILARHYRVIAMDMLGFGK 64
>d1c4xa_ c.69.1.10 (A:) 2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate
hydrolase (BPHD) {Rhodococcus sp., strain rha1 [TaxId:
1831]}
Length = 281
Score = 29.9 bits (65), Expect = 0.057
Identities = 7/34 (20%), Positives = 16/34 (47%), Gaps = 3/34 (8%)
Query: 1 MLFLHGFP---ESWYIWKHQMSEFSHEYWTVAVD 31
++ LHG + W+ + + + ++ VA D
Sbjct: 29 VVLLHGAGPGAHAASNWRPIIPDLAENFFVVAPD 62
>d1tqha_ c.69.1.29 (A:) Carboxylesterase Est {Bacillus
stearothermophilus [TaxId: 1422]}
Length = 242
Score = 29.1 bits (63), Expect = 0.11
Identities = 6/27 (22%), Positives = 10/27 (37%)
Query: 2 LFLHGFPESWYIWKHQMSEFSHEYWTV 28
L LHGF + + + +T
Sbjct: 15 LLLHGFTGNSADVRMLGRFLESKGYTC 41
>d3b5ea1 c.69.1.14 (A:7-215) Uncharacterized protein Mll8374
{Mesorhizobium loti [TaxId: 381]}
Length = 209
Score = 28.9 bits (63), Expect = 0.12
Identities = 12/109 (11%), Positives = 28/109 (25%), Gaps = 20/109 (18%)
Query: 1 MLFLHGFPES--------------WYIWKHQMSEFSHEYWTVAVDIKTNFRTIADRYFLV 46
+ LHG + + + + I
Sbjct: 26 LFLLHGSGVDETTLVPLARRIAPTATLVAARGRIPQEDGFRWFERIDPTRFEQKSILAET 85
Query: 47 DSLKVFLDHLGR------NRCILIGRDFGGSLVWSFLDKYPELVVKSII 89
+ F + + + +G G +LV S + +P +V + +
Sbjct: 86 AAFAAFTNEAAKRHGLNLDHATFLGYSNGANLVSSLMLLHPGIVRLAAL 134
>d2r8ba1 c.69.1.14 (A:44-246) Uncharacterized protein Atu2452
{Agrobacterium tumefaciens [TaxId: 358]}
Length = 203
Score = 28.1 bits (61), Expect = 0.18
Identities = 14/113 (12%), Positives = 35/113 (30%), Gaps = 18/113 (15%)
Query: 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRT------------------IADR 42
+ LHG + + + ++ +
Sbjct: 20 FVLLHGTGGDENQFFDFGARLLPQATILSPVGDVSEHGAARFFRRTGEGVYDMVDLERAT 79
Query: 43 YFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHP 95
+ D +K +H I +G G +++ + L + PEL +++++ P
Sbjct: 80 GKMADFIKANREHYQAGPVIGLGFSNGANILANVLIEQPELFDAAVLMHPLIP 132
>d1w8oa1 b.1.18.2 (A:403-505) Sialidase, "linker" domain
{Micromonospora viridifaciens [TaxId: 1881]}
Length = 103
Score = 26.5 bits (58), Expect = 0.51
Identities = 6/38 (15%), Positives = 8/38 (21%)
Query: 8 PESWYIWKHQMSEFSHEYWTVAVDIKTNFRTIADRYFL 45
W + V I T RY +
Sbjct: 43 SPDWQVQGSVEPLMPGRQAKGQVTITVPAGTTPGRYRV 80
>d1imja_ c.69.1.23 (A:) Ccg1/TafII250-interacting factor B (Cib)
{Human (Homo sapiens) [TaxId: 9606]}
Length = 208
Score = 26.2 bits (56), Expect = 0.85
Identities = 6/30 (20%), Positives = 12/30 (40%), Gaps = 2/30 (6%)
Query: 1 MLFLHGFPESWYIWKH--QMSEFSHEYWTV 28
+L LHG S W++ + + +
Sbjct: 34 VLLLHGIRFSSETWQNLGTLHRLAQAGYRA 63
>d2rhwa1 c.69.1.10 (A:4-286)
2-hydroxy-6-oxo-6-phenylhexa-2,4-dienoate hydrolase
(BPHD) {Burkholderia xenovorans [TaxId: 36873]}
Length = 283
Score = 25.6 bits (54), Expect = 1.9
Identities = 6/35 (17%), Positives = 10/35 (28%), Gaps = 4/35 (11%)
Query: 1 MLFLHGFPESWYIWKHQMSEF----SHEYWTVAVD 31
++ LHG W + Y + D
Sbjct: 33 VIMLHGGGPGAGGWSNYYRNVGPFVDAGYRVILKD 67
>d1ap8a_ d.86.1.1 (A:) Translation initiation factor eIF4e {Baker's
yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Length = 213
Score = 24.6 bits (53), Expect = 2.9
Identities = 15/90 (16%), Positives = 34/90 (37%), Gaps = 11/90 (12%)
Query: 5 HGFPESWYIWKHQMSEFSHEYWTVAVDIKTNFRTIADRYFLVDSLKVFLD-------HLG 57
H W +W + + E W+ + T+F+T+ + + ++ ++ + H+
Sbjct: 37 HPLNTKWTLWYTKPAVDKSESWSDLLRPVTSFQTVEEFWAIIQNIPEPHELPLKSDYHVF 96
Query: 58 RNRCILIGRDF----GGSLVWSFLDKYPEL 83
RN D GG + K ++
Sbjct: 97 RNDVRPEWEDEANAKGGKWSFQLRGKGADI 126
>d1thta_ c.69.1.13 (A:) Myristoyl-ACP-specific thioesterase {Vibrio
harveyi [TaxId: 669]}
Length = 302
Score = 24.9 bits (53), Expect = 3.1
Identities = 12/115 (10%), Positives = 29/115 (25%), Gaps = 10/115 (8%)
Query: 1 MLFLHGFPESWYIWKHQMSEFSHEYWTVAV----------DIKTNFRTIADRYFLVDSLK 50
+L GF + S + V + T+ + ++
Sbjct: 35 ILIASGFARRMDHFAGLAEYLSTNGFHVFRYDSLHHVGLSSGSIDEFTMTTGKNSLCTVY 94
Query: 51 VFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHPAVFKQELKKM 105
+L G LI + + + + + + V ++ L
Sbjct: 95 HWLQTKGTQNIGLIAASLSARVAYEVISDLELSFLITAVGVVNLRDTLEKALGFD 149
>d1ufoa_ c.69.1.27 (A:) Hypothetical protein TT1662 {Thermus
thermophilus [TaxId: 274]}
Length = 238
Score = 24.7 bits (52), Expect = 3.1
Identities = 12/115 (10%), Positives = 25/115 (21%), Gaps = 20/115 (17%)
Query: 1 MLFLHGFPESWYIWKHQMSEFSHEYWTV--------------------AVDIKTNFRTIA 40
+L LHG S + ++ + + ++ +R
Sbjct: 27 LLALHGLQGSKEHILALLPGYAERGFLLLAFDAPRHGEREGPPPSSKSPRYVEEVYRVAL 86
Query: 41 DRYFLVDSLKVFLDHLGRNRCILIGRDFGGSLVWSFLDKYPELVVKSIIINVPHP 95
+ + L G G + L + I P
Sbjct: 87 GFKEEARRVAEEAERRFGLPLFLAGGSLGAFVAHLLLAEGFRPRGVLAFIGSGFP 141
>d1vffa1 c.1.8.4 (A:1-423) Beta-glucosidase A {Archaeon Pyrococcus
horikoshii [TaxId: 53953]}
Length = 423
Score = 23.7 bits (50), Expect = 7.9
Identities = 15/79 (18%), Positives = 27/79 (34%), Gaps = 4/79 (5%)
Query: 4 LHGFPESWYIWKHQMSEFSHEYWTVAVD--IKTNFRTIADRYFLVDSLKVFLDHLGRNRC 61
W ++ + + I N D + V+ + L ++ ++
Sbjct: 292 ERKTQMGWSVYPKGIYMALKKASRYGRPLYITENGIATLDDEWRVEFIIQHLQYV--HKA 349
Query: 62 ILIGRDFGGSLVWSFLDKY 80
I G D G WSF+D Y
Sbjct: 350 IEDGLDVRGYFYWSFMDNY 368
>d1qo7a_ c.69.1.11 (A:) Bacterial epoxide hydrolase {Aspergillus
niger [TaxId: 5061]}
Length = 394
Score = 23.5 bits (49), Expect = 8.0
Identities = 8/26 (30%), Positives = 13/26 (50%)
Query: 1 MLFLHGFPESWYIWKHQMSEFSHEYW 26
+ LHG+P S+ + + F EY
Sbjct: 109 IALLHGWPGSFVEFYPILQLFREEYT 134
Database: scop70_1_75
Posted date: Mar 27, 2010 6:21 PM
Number of letters in database: 2,407,596
Number of sequences in database: 13,730
Lambda K H
0.327 0.142 0.457
Gapped
Lambda K H
0.267 0.0359 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 13730
Number of Hits to DB: 462,696
Number of extensions: 19552
Number of successful extensions: 128
Number of sequences better than 10.0: 1
Number of HSP's gapped: 121
Number of HSP's successfully gapped: 49
Length of query: 115
Length of database: 2,407,596
Length adjustment: 73
Effective length of query: 42
Effective length of database: 1,405,306
Effective search space: 59022852
Effective search space used: 59022852
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 47 (22.9 bits)