BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13246
(81 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|P62246|RS15A_RAT 40S ribosomal protein S15a OS=Rattus norvegicus GN=Rps15a PE=1
SV=2
Length = 130
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 49/53 (92%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVI 53
MVR+NVL+DALKSINNAEKRGKRQVLIRPCSKVIV+FLTVMMKHG + E +I
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEII 53
>sp|P62245|RS15A_MOUSE 40S ribosomal protein S15a OS=Mus musculus GN=Rps15a PE=2 SV=2
Length = 130
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 49/53 (92%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVI 53
MVR+NVL+DALKSINNAEKRGKRQVLIRPCSKVIV+FLTVMMKHG + E +I
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEII 53
>sp|P62244|RS15A_HUMAN 40S ribosomal protein S15a OS=Homo sapiens GN=RPS15A PE=1 SV=2
Length = 130
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 49/53 (92%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVI 53
MVR+NVL+DALKSINNAEKRGKRQVLIRPCSKVIV+FLTVMMKHG + E +I
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEII 53
>sp|Q76I82|RS15A_BOVIN 40S ribosomal protein S15a OS=Bos taurus GN=RPS15A PE=2 SV=1
Length = 130
Score = 90.9 bits (224), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 49/53 (92%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVI 53
MVR+NVL+DALKSINNAEKRGKRQVLIRPCSKVIV+FLTVMMKHG + E +I
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEII 53
>sp|Q5R938|RS15A_PONAB 40S ribosomal protein S15a OS=Pongo abelii GN=RPS15A PE=2 SV=1
Length = 130
Score = 90.5 bits (223), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 44/53 (83%), Positives = 49/53 (92%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVI 53
MVR+NVL+DALKSINNAEKRGKRQVLIRPCSKVIV+FLTVMMKHG + E +I
Sbjct: 1 MVRMNVLADALKSINNAEKRGKRQVLIRPCSKVIVRFLTVMMKHGYIGEFEII 53
>sp|Q6XIM8|RS15A_DROYA 40S ribosomal protein S15a OS=Drosophila yakuba GN=RpS15Aa PE=2
SV=3
Length = 130
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILGIRTTV 60
MVR+NVL+DALK INNAEKRGKRQVL+RPCSKVI+KFLTVMMKHG + E F I+ +
Sbjct: 1 MVRMNVLADALKCINNAEKRGKRQVLLRPCSKVIIKFLTVMMKHGYIGE-FEIVDDHRSG 59
Query: 61 YCMINWSG 68
++N +G
Sbjct: 60 KIVVNLTG 67
>sp|P48149|RS15A_DROME 40S ribosomal protein S15Aa OS=Drosophila melanogaster GN=RpS15Aa
PE=2 SV=2
Length = 130
Score = 87.4 bits (215), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 45/68 (66%), Positives = 55/68 (80%), Gaps = 1/68 (1%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILGIRTTV 60
MVR+NVL+DALK INNAEKRGKRQVL+RPCSKVI+KFLTVMMKHG + E F I+ +
Sbjct: 1 MVRMNVLADALKCINNAEKRGKRQVLLRPCSKVIIKFLTVMMKHGYIGE-FEIVDDHRSG 59
Query: 61 YCMINWSG 68
++N +G
Sbjct: 60 KIVVNLTG 67
>sp|Q7KR04|RS15B_DROME 40S ribosomal protein S15Ab OS=Drosophila melanogaster GN=RpS15Ab
PE=2 SV=3
Length = 130
Score = 87.0 bits (214), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/53 (77%), Positives = 48/53 (90%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVI 53
MVR+NVL+DALK INNAEKRGKRQVL+RPCSKVI+KFLTVMMKHG + E ++
Sbjct: 1 MVRMNVLADALKCINNAEKRGKRQVLLRPCSKVIIKFLTVMMKHGYIGEFEIV 53
>sp|Q90YQ8|RS15A_ICTPU 40S ribosomal protein S15a OS=Ictalurus punctatus GN=rps15a PE=2
SV=3
Length = 130
Score = 85.9 bits (211), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 42/53 (79%), Positives = 47/53 (88%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVI 53
MVR+NVL+DALK INNAEKRGK QVLIRPCSKVIV+FLTVMMKHG + E +I
Sbjct: 1 MVRMNVLADALKCINNAEKRGKAQVLIRPCSKVIVRFLTVMMKHGYIGEFEII 53
>sp|P33095|RS15A_STRPU 40S ribosomal protein S15a OS=Strongylocentrotus purpuratus
GN=RPS15A PE=2 SV=3
Length = 130
Score = 78.2 bits (191), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 39/53 (73%), Positives = 45/53 (84%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVI 53
MVR+NVL+DAL+SI NAEKR KRQVLIRPCSKV VKFL VMMKHG + E ++
Sbjct: 1 MVRMNVLADALRSICNAEKRCKRQVLIRPCSKVTVKFLMVMMKHGYIGEFEIV 53
>sp|Q96W54|RS22_CANAL 40S ribosomal protein S22 OS=Candida albicans (strain SC5314 /
ATCC MYA-2876) GN=RPS22A PE=3 SV=3
Length = 130
Score = 76.3 bits (186), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 38/58 (65%), Positives = 44/58 (75%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILGIRT 58
M R +VL+DAL +INNAEK GKRQVLIRP SKVI+KFLTVM KHG + E I R+
Sbjct: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLTVMQKHGYIGEFEYIDDHRS 58
>sp|P42798|R15A1_ARATH 40S ribosomal protein S15a-1 OS=Arabidopsis thaliana GN=RPS15AA
PE=2 SV=2
Length = 130
Score = 76.3 bits (186), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 43/49 (87%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPE 49
MVR++VL+DALKS+ NAEKRGKRQV+IRP SKVI+KFL VM KHG + E
Sbjct: 1 MVRISVLNDALKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGE 49
>sp|Q00332|RS15A_BRANA 40S ribosomal protein S15a OS=Brassica napus GN=RPS15A PE=2 SV=3
Length = 130
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 43/49 (87%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPE 49
MVR++VL+DALKS+ NAEKRGKRQV+IRP SKVI+KFL VM KHG + E
Sbjct: 1 MVRISVLNDALKSMFNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGE 49
>sp|Q7RV75|RS22_NEUCR 40S ribosomal protein S22 OS=Neurospora crassa (strain ATCC 24698
/ 74-OR23-1A / CBS 708.71 / DSM 1257 / FGSC 987)
GN=rps-22 PE=3 SV=1
Length = 130
Score = 75.5 bits (184), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 37/49 (75%), Positives = 40/49 (81%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPE 49
MVR +VL DAL SINNAEK GKRQVLIRP SKVI+KFL VM KHG + E
Sbjct: 1 MVRTSVLHDALNSINNAEKAGKRQVLIRPSSKVIIKFLQVMQKHGYIGE 49
>sp|Q9AT34|RS15A_DAUCA 40S ribosomal protein S15a OS=Daucus carota GN=RPS15A PE=2 SV=3
Length = 130
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/49 (73%), Positives = 43/49 (87%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPE 49
MVRV+VL+DALKS+ NAEKRGKRQV+IRP SKV++KFL VM KHG + E
Sbjct: 1 MVRVSVLNDALKSMFNAEKRGKRQVMIRPSSKVVIKFLMVMQKHGYIGE 49
>sp|O80646|R15A3_ARATH 40S ribosomal protein S15a-3 OS=Arabidopsis thaliana GN=RPS15AC
PE=2 SV=2
Length = 130
Score = 75.1 bits (183), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 43/49 (87%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPE 49
MVR +VL+D LKS++NAEK+GKRQV+IRP SKVI+KFLTVM KHG + E
Sbjct: 1 MVRASVLNDCLKSMSNAEKQGKRQVMIRPSSKVIIKFLTVMQKHGYIAE 49
>sp|Q9LX88|R15A4_ARATH 40S ribosomal protein S15a-4 OS=Arabidopsis thaliana GN=RPS15AD
PE=2 SV=3
Length = 130
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 42/49 (85%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPE 49
MVR++VL+D LKS+ NAEKRGKRQV+IRP SKVI+KFL VM KHG + E
Sbjct: 1 MVRISVLNDGLKSMYNAEKRGKRQVMIRPSSKVIIKFLIVMQKHGYIGE 49
>sp|Q752J5|RS22_ASHGO 40S ribosomal protein S22 OS=Ashbya gossypii (strain ATCC 10895 /
CBS 109.51 / FGSC 9923 / NRRL Y-1056) GN=RPS22A PE=3
SV=3
Length = 130
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 43/58 (74%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILGIRT 58
M R +VL+DAL +INNAEK GKRQVLIRP SKVI+KFL VM KHG + E I R+
Sbjct: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRS 58
>sp|Q6CW21|RS22_KLULA 40S ribosomal protein S22 OS=Kluyveromyces lactis (strain ATCC
8585 / CBS 2359 / DSM 70799 / NBRC 1267 / NRRL Y-1140 /
WM37) GN=RPS22 PE=3 SV=3
Length = 130
Score = 74.7 bits (182), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 43/58 (74%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILGIRT 58
M R +VL+DAL +INNAEK GKRQVLIRP SKVI+KFL VM KHG + E I R+
Sbjct: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRS 58
>sp|P33953|RS22_KLUMA 40S ribosomal protein S22 OS=Kluyveromyces marxianus GN=RPS22
PE=3 SV=3
Length = 130
Score = 74.3 bits (181), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 43/58 (74%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILGIRT 58
M R +VL+DAL +INNAEK GKRQVLIRP SKVI+KFL VM KHG + E I R+
Sbjct: 1 MTRTSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRS 58
>sp|P0C0W1|RS22A_YEAST 40S ribosomal protein S22-A OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS22A PE=1 SV=2
Length = 130
Score = 73.9 bits (180), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 37/58 (63%), Positives = 43/58 (74%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILGIRT 58
M R +VL+DAL +INNAEK GKRQVLIRP SKVI+KFL VM KHG + E I R+
Sbjct: 1 MTRSSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRS 58
>sp|Q3E7Y3|RS22B_YEAST 40S ribosomal protein S22-B OS=Saccharomyces cerevisiae (strain
ATCC 204508 / S288c) GN=RPS22B PE=1 SV=3
Length = 130
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 43/58 (74%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILGIRT 58
M R +VL+DAL +INNAEK GKRQVL+RP SKVI+KFL VM KHG + E I R+
Sbjct: 1 MTRSSVLADALNAINNAEKTGKRQVLLRPSSKVIIKFLQVMQKHGYIGEFEYIDDHRS 58
>sp|Q6FMW9|RS22_CANGA 40S ribosomal protein S22 OS=Candida glabrata (strain ATCC 2001 /
CBS 138 / JCM 3761 / NBRC 0622 / NRRL Y-65) GN=RPS22
PE=3 SV=3
Length = 130
Score = 72.8 bits (177), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 36/58 (62%), Positives = 43/58 (74%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILGIRT 58
M R +VL+DAL +INNAEK GKRQVLIRP SKVI+KFL VM +HG + E I R+
Sbjct: 1 MTRSSVLADALNAINNAEKTGKRQVLIRPSSKVIIKFLQVMQRHGYIGEFEYIDDHRS 58
>sp|O14469|RS22_SCHPO 40S ribosomal protein S22 OS=Schizosaccharomyces pombe (strain
972 / ATCC 24843) GN=rps22a PE=2 SV=1
Length = 130
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/49 (71%), Positives = 41/49 (83%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPE 49
MVR +VL+D L +I NAE+RG+RQVLIRP SKVIVKFLTVM KHG + E
Sbjct: 1 MVRQSVLADCLNNIVNAERRGRRQVLIRPSSKVIVKFLTVMQKHGYIDE 49
>sp|P50891|RS15A_PARLI 40S ribosomal protein S15a OS=Paracentrotus lividus GN=RPS15A
PE=2 SV=2
Length = 130
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/53 (67%), Positives = 43/53 (81%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVI 53
MVR+NVL+ AL+ I NAEKR KRQVLIRPCSKV +KFL VM+KHG + E V+
Sbjct: 1 MVRMNVLAAALRCICNAEKRCKRQVLIRPCSKVTIKFLMVMIKHGYIGEFEVV 53
>sp|P46792|RS22_AGABI 40S ribosomal protein S22 OS=Agaricus bisporus GN=rps22 PE=2 SV=1
Length = 130
Score = 71.2 bits (173), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/53 (62%), Positives = 44/53 (83%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVI 53
MVR++VL+D LKSI NA +RGKRQV++RP SKV+VKFL+VM +HG + E +I
Sbjct: 1 MVRISVLNDCLKSICNASRRGKRQVIVRPSSKVVVKFLSVMQRHGYIGEFEII 53
>sp|P46793|RS15A_DICDI 40S ribosomal protein S15a OS=Dictyostelium discoideum GN=rps15a
PE=2 SV=3
Length = 130
Score = 65.9 bits (159), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 34/58 (58%), Positives = 44/58 (75%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILGIRT 58
MVR++VL+D L SI NAE++GKRQVL+RP SKVIVKFL VMMK + E ++ R+
Sbjct: 1 MVRISVLNDCLNSIVNAERQGKRQVLVRPSSKVIVKFLEVMMKKRYIGEFEIVDDHRS 58
>sp|A8MAJ5|RS8_CALMQ 30S ribosomal protein S8 OS=Caldivirga maquilingensis (strain
ATCC 700844 / DSMZ 13496 / JCM 10307 / IC-167) GN=rps8
PE=3 SV=1
Length = 130
Score = 53.5 bits (127), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 39/63 (61%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILGIRTTV 60
MV ++VLS+AL S+ NAE RG RQV+I P SK+I L VM ++G + E + R
Sbjct: 1 MVMLDVLSNALMSVKNAESRGDRQVIIWPSSKLIGNVLRVMQRYGYVGEFEYVYDGRGGK 60
Query: 61 YCM 63
Y +
Sbjct: 61 YVV 63
>sp|Q8U014|RS8_PYRFU 30S ribosomal protein S8 OS=Pyrococcus furiosus (strain ATCC
43587 / DSM 3638 / JCM 8422 / Vc1) GN=rps8 PE=1 SV=1
Length = 130
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILGIRTTV 60
M ++ L++AL I N+E+ GKR+V I+P SK+I + L VM K+G + E I R V
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGV 60
Query: 61 Y-----CMINWSG-IKP 71
Y IN +G IKP
Sbjct: 61 YRVQLLGRINKAGAIKP 77
>sp|Q9V1V0|RS8_PYRAB 30S ribosomal protein S8 OS=Pyrococcus abyssi (strain GE5 /
Orsay) GN=rps8 PE=3 SV=1
Length = 130
Score = 50.1 bits (118), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILGIRTTV 60
M ++ L++AL I N+E+ GKR+V I+P SK+I + L VM K+G + E I R V
Sbjct: 1 MTLLDPLANALSHITNSERVGKREVYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGV 60
Query: 61 Y-----CMINWSG-IKP 71
Y IN +G IKP
Sbjct: 61 YRVQLLGKINKAGAIKP 77
>sp|O59432|RS8_PYRHO 30S ribosomal protein S8 OS=Pyrococcus horikoshii (strain ATCC
700860 / DSM 12428 / JCM 9974 / NBRC 100139 / OT-3)
GN=rps8 PE=3 SV=1
Length = 130
Score = 49.7 bits (117), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILGIRTTV 60
M ++ L++AL I N+E+ GKR++ I+P SK+I + L VM K+G + E I R V
Sbjct: 1 MTLLDPLANALSHITNSERVGKREIYIKPASKLIGEVLRVMQKYGYIGEFEFIDDGRAGV 60
Query: 61 Y-----CMINWSG-IKP 71
Y IN +G IKP
Sbjct: 61 YRVQLLGRINKAGAIKP 77
>sp|B1Y8V5|RS8_PYRNV 30S ribosomal protein S8 OS=Pyrobaculum neutrophilum (strain DSM
2338 / JCM 9278 / V24Sta) GN=rps8 PE=3 SV=1
Length = 130
Score = 48.5 bits (114), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 38/63 (60%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILGIRTTV 60
MV +++LS+AL I NAE GKRQV I P +K+I L V+ +HG + EV I R
Sbjct: 1 MVMLDLLSNALIQIKNAEAMGKRQVAIWPVNKLIYYTLRVLQRHGYVGEVEYIDDGRGGK 60
Query: 61 YCM 63
Y +
Sbjct: 61 YVV 63
>sp|A3MSJ6|RS8_PYRCJ 30S ribosomal protein S8 OS=Pyrobaculum calidifontis (strain JCM
11548 / VA1) GN=rps8 PE=3 SV=1
Length = 130
Score = 47.8 bits (112), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 40/63 (63%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILGIRTTV 60
MV +++LS+AL +I NAE GKRQV+I P +K+I L V+ ++G + E+ I R
Sbjct: 1 MVMLDLLSNALTAIKNAEAMGKRQVVIWPVNKLIYYTLRVLQRYGYVGEIEYIDDGRGGK 60
Query: 61 YCM 63
Y +
Sbjct: 61 YVV 63
>sp|Q5JJG3|RS8_PYRKO 30S ribosomal protein S8 OS=Pyrococcus kodakaraensis (strain ATCC
BAA-918 / JCM 12380 / KOD1) GN=rps8 PE=3 SV=1
Length = 130
Score = 47.0 bits (110), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 47/77 (61%), Gaps = 6/77 (7%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILGIRTTV 60
M ++ L++AL I N+E+ GK++V I+P SK+I + L VM+++G + E +I R +
Sbjct: 1 MTLLDPLANALSHITNSERVGKKEVYIKPASKLIGEVLRVMLENGYIGEFELIDDGRAGI 60
Query: 61 Y-----CMINWSG-IKP 71
Y IN +G IKP
Sbjct: 61 YRVQLIGKINKAGAIKP 77
>sp|A3DNC2|RS8_STAMF 30S ribosomal protein S8 OS=Staphylothermus marinus (strain ATCC
43588 / DSM 3639 / F1) GN=rps8 PE=3 SV=1
Length = 133
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 33/53 (62%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVI 53
MV ++ L++AL +I NAE R K + LI P SK+I+ L VM + G + E I
Sbjct: 1 MVMLDTLANALATIQNAEMRAKSEALIWPASKLIINVLRVMQREGYIGEFEYI 53
>sp|B6YSM9|RS8_THEON 30S ribosomal protein S8 OS=Thermococcus onnurineus (strain NA1)
GN=rps8 PE=3 SV=1
Length = 130
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILGIRTTV 60
M ++ L++AL I N+E+ GK++V I+P SK+I + L VM ++G + E I R +
Sbjct: 1 MTLLDPLANALSHITNSERVGKKEVYIKPASKLIGEVLRVMQENGYIGEFEFIDDGRAGI 60
Query: 61 Y-----CMINWSG-IKP 71
Y IN +G IKP
Sbjct: 61 YRVQLIGKINKAGAIKP 77
>sp|C5A270|RS8_THEGJ 30S ribosomal protein S8 OS=Thermococcus gammatolerans (strain
DSM 15229 / JCM 11827 / EJ3) GN=rps8 PE=3 SV=1
Length = 130
Score = 46.2 bits (108), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 45/77 (58%), Gaps = 6/77 (7%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILGIRTTV 60
M ++ L++AL I N+E+ GK++V I+P SK+I + L VM ++G + E I R +
Sbjct: 1 MTLLDPLANALSHITNSERVGKKEVYIKPASKLIGEVLRVMQENGYIGEFEFIDDGRAGI 60
Query: 61 Y-----CMINWSG-IKP 71
Y IN +G IKP
Sbjct: 61 YRVQLIGKINKAGAIKP 77
>sp|C6A175|RS8_THESM 30S ribosomal protein S8 OS=Thermococcus sibiricus (strain MM 739
/ DSM 12597) GN=rps8 PE=3 SV=1
Length = 130
Score = 45.4 bits (106), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 44/77 (57%), Gaps = 6/77 (7%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILGIRTTV 60
M ++ L++AL I N+EK GK +V I+P SK+I + L VM ++G + E I R +
Sbjct: 1 MTLLDPLANALSHITNSEKVGKSEVYIKPASKLIGEVLRVMQENGYIGEFEFIDDGRAGI 60
Query: 61 Y-----CMINWSG-IKP 71
Y +N +G IKP
Sbjct: 61 YRVQLLGKVNKAGAIKP 77
>sp|A1RVN1|RS8_PYRIL 30S ribosomal protein S8 OS=Pyrobaculum islandicum (strain DSM
4184 / JCM 9189) GN=rps8 PE=3 SV=1
Length = 130
Score = 43.9 bits (102), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 39/63 (61%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILGIRTTV 60
MV +++LS+AL I NAE GK+QV+I P +K+I L V+ ++G + E+ I R
Sbjct: 1 MVMLDLLSNALIQIKNAEIMGKKQVVIWPVNKLIYHTLRVLQRYGYVGEIEYIDDGRGGK 60
Query: 61 YCM 63
Y +
Sbjct: 61 YVV 63
>sp|Q9UX92|RS8_SULSO 30S ribosomal protein S8 OS=Sulfolobus solfataricus (strain ATCC
35092 / DSM 1617 / JCM 11322 / P2) GN=rps8 PE=3 SV=1
Length = 133
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPE 49
MV VN L++AL SI N E R +Q +I P SK+++ L VM K G + E
Sbjct: 1 MVFVNPLANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGE 49
>sp|C3NEF8|RS8_SULIY 30S ribosomal protein S8 OS=Sulfolobus islandicus (strain
Y.G.57.14 / Yellowstone #1) GN=rps8 PE=3 SV=1
Length = 133
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPE 49
MV VN L++AL SI N E R +Q +I P SK+++ L VM K G + E
Sbjct: 1 MVFVNPLANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGE 49
>sp|C3NH94|RS8_SULIN 30S ribosomal protein S8 OS=Sulfolobus islandicus (strain
Y.N.15.51 / Yellowstone #2) GN=rps8 PE=3 SV=1
Length = 133
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPE 49
MV VN L++AL SI N E R +Q +I P SK+++ L VM K G + E
Sbjct: 1 MVFVNPLANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGE 49
>sp|C3MVJ3|RS8_SULIM 30S ribosomal protein S8 OS=Sulfolobus islandicus (strain M.14.25
/ Kamchatka #1) GN=rps8 PE=3 SV=1
Length = 133
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPE 49
MV VN L++AL SI N E R +Q +I P SK+++ L VM K G + E
Sbjct: 1 MVFVNPLANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGE 49
>sp|C3MQ74|RS8_SULIL 30S ribosomal protein S8 OS=Sulfolobus islandicus (strain
L.S.2.15 / Lassen #1) GN=rps8 PE=3 SV=1
Length = 133
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPE 49
MV VN L++AL SI N E R +Q +I P SK+++ L VM K G + E
Sbjct: 1 MVFVNPLANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGE 49
>sp|C4KHH1|RS8_SULIK 30S ribosomal protein S8 OS=Sulfolobus islandicus (strain M.16.4
/ Kamchatka #3) GN=rps8 PE=3 SV=1
Length = 133
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPE 49
MV VN L++AL SI N E R +Q +I P SK+++ L VM K G + E
Sbjct: 1 MVFVNPLANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGE 49
>sp|C3N5U2|RS8_SULIA 30S ribosomal protein S8 OS=Sulfolobus islandicus (strain
M.16.27) GN=rps8 PE=3 SV=1
Length = 133
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/49 (46%), Positives = 31/49 (63%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPE 49
MV VN L++AL SI N E R +Q +I P SK+++ L VM K G + E
Sbjct: 1 MVFVNPLANALTSIYNNEMRRNKQAIIMPASKLVINVLRVMQKEGYVGE 49
>sp|O82205|R15A2_ARATH 40S ribosomal protein S15a-2 OS=Arabidopsis thaliana GN=RPS15AB
PE=2 SV=1
Length = 129
Score = 43.5 bits (101), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/40 (50%), Positives = 29/40 (72%)
Query: 6 VLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHG 45
+L+DAL++I NAEKRGK V ++P S V+ FL +M + G
Sbjct: 5 ILNDALRTIVNAEKRGKASVELKPVSTVMSSFLKIMKEKG 44
>sp|A2BMD4|RS8_HYPBU 30S ribosomal protein S8 OS=Hyperthermus butylicus (strain DSM
5456 / JCM 9403) GN=rps8 PE=3 SV=1
Length = 133
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/77 (38%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILG----- 55
MV ++ L++A+ +I NAE R K +V+I P SK+I L VM + G + E I
Sbjct: 1 MVMLDTLANAMAAIVNAEMRAKPEVIIMPASKLIANVLRVMQREGYIGEFEYIDDGRWGK 60
Query: 56 IRTTVYCMINWSG-IKP 71
IR + IN +G IKP
Sbjct: 61 IRVRLLGRINKAGVIKP 77
>sp|A3CT12|RS8_METMJ 30S ribosomal protein S8 OS=Methanoculleus marisnigri (strain
ATCC 35101 / DSM 1498 / JR1) GN=rps8 PE=3 SV=1
Length = 130
Score = 43.1 bits (100), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 30/45 (66%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHG 45
M R+N ++DA+ +I NA GK +V++ P SK++ L VM ++G
Sbjct: 1 MARLNPIADAMSTIKNAGDAGKGEVIVEPASKLLGAMLRVMQENG 45
>sp|B1L781|RS8_KORCO 30S ribosomal protein S8 OS=Korarchaeum cryptofilum (strain OPF8)
GN=rps8 PE=3 SV=1
Length = 130
Score = 43.1 bits (100), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 43/77 (55%), Gaps = 6/77 (7%)
Query: 1 MVRVNVLSDALKSINNAEKRGKRQVLIRPCSKVIVKFLTVMMKHGKLPEVFVILGIRTTV 60
M R++ L+DA+ ++ N GKR+V+I SK+I K L V+ +HG + E + R
Sbjct: 1 MTRLDPLADAMSTLTNGSMLGKREVVINIASKLIGKVLKVLKEHGYIDEFEYVDDGRFGK 60
Query: 61 YCM-----INWSG-IKP 71
Y + IN +G IKP
Sbjct: 61 YVVRLNGRINKAGVIKP 77
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.327 0.140 0.419
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 26,907,205
Number of Sequences: 539616
Number of extensions: 820658
Number of successful extensions: 2306
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 86
Number of HSP's successfully gapped in prelim test: 0
Number of HSP's that attempted gapping in prelim test: 2220
Number of HSP's gapped (non-prelim): 86
length of query: 81
length of database: 191,569,459
effective HSP length: 52
effective length of query: 29
effective length of database: 163,509,427
effective search space: 4741773383
effective search space used: 4741773383
T: 11
A: 40
X1: 15 ( 7.1 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 40 (21.7 bits)
S2: 55 (25.8 bits)