Query psy13247
Match_columns 187
No_of_seqs 120 out of 1642
Neff 9.2
Searched_HMMs 29240
Date Fri Aug 16 23:53:15 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13247.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13247hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3hve_A Gigaxonin; ubiquitin, c 100.0 1.2E-33 4E-38 219.7 7.3 181 1-187 3-195 (256)
2 3i3n_A Kelch-like protein 11; 100.0 9.4E-33 3.2E-37 217.1 6.5 173 3-186 6-202 (279)
3 2ihc_A Transcription regulator 100.0 6.2E-30 2.1E-34 178.2 9.5 119 3-126 3-122 (124)
4 3ohu_A Transcription regulator 100.0 1.7E-29 5.8E-34 176.1 11.4 118 3-125 6-124 (125)
5 3ga1_A Nucleus accumbens-assoc 100.0 1.2E-29 4E-34 177.9 9.9 119 1-126 5-124 (129)
6 2ppi_A Gigaxonin; BTB domain, 100.0 1E-29 3.4E-34 181.5 9.4 120 2-126 20-143 (144)
7 2if5_A Zinc finger and BTB dom 100.0 1.7E-29 5.9E-34 174.9 10.0 115 5-124 1-117 (120)
8 3b84_A Zinc finger and BTB dom 100.0 4.3E-30 1.5E-34 177.7 6.6 113 7-126 2-114 (119)
9 2z8h_A Transcription regulator 100.0 1.3E-29 4.3E-34 179.7 8.9 120 3-127 10-130 (138)
10 1buo_A POZ domain, protein (pr 100.0 6.5E-29 2.2E-33 172.3 9.5 114 3-124 2-115 (121)
11 2yy9_A Zinc finger and BTB dom 100.0 4.1E-29 1.4E-33 176.5 7.9 116 8-130 4-119 (135)
12 2vpk_A Myoneurin; transcriptio 100.0 2.4E-29 8.1E-34 173.2 6.2 109 9-124 2-112 (116)
13 1r29_A B-cell lymphoma 6 prote 100.0 1.5E-28 5E-33 171.8 10.2 116 4-124 4-121 (127)
14 3fkc_A Transcriptional regulat 100.0 4E-28 1.4E-32 167.1 9.5 111 2-120 4-115 (116)
15 2q81_A MIZ-1 protein; BTB/POZ 99.9 5.1E-29 1.7E-33 172.3 2.8 112 5-124 3-114 (119)
16 4eoz_A Speckle-type POZ protei 99.9 1.5E-27 5E-32 170.0 6.4 135 11-151 7-143 (145)
17 3htm_A Speckle-type POZ protei 99.9 8.5E-27 2.9E-31 170.5 7.6 147 9-161 14-162 (172)
18 2vkp_A BTB/POZ domain-containi 99.9 6.6E-26 2.3E-30 154.1 7.8 100 23-124 2-103 (109)
19 3m5b_A Zinc finger and BTB dom 99.9 6.7E-26 2.3E-30 156.6 6.6 106 6-125 9-114 (119)
20 3hqi_A Speckle-type POZ protei 99.9 1.6E-24 5.6E-29 172.5 7.8 144 12-161 157-302 (312)
21 2ast_A S-phase kinase-associat 99.4 3.6E-13 1.2E-17 97.1 5.8 87 32-124 3-120 (159)
22 4ajy_C Transcription elongatio 99.3 3.5E-12 1.2E-16 84.3 7.9 79 32-115 4-97 (97)
23 1fs1_B SKP1, cyclin A/CDK2-ass 99.1 7E-11 2.4E-15 83.3 4.8 86 32-124 4-115 (141)
24 2p1m_A SKP1-like protein 1A; F 98.9 1.1E-10 3.8E-15 84.0 -0.3 86 32-124 6-119 (160)
25 3drz_A BTB/POZ domain-containi 98.7 7.7E-08 2.6E-12 64.4 7.5 88 31-124 7-102 (107)
26 1hv2_A Elongin C, ELC1; protei 98.6 2.1E-07 7E-12 61.4 7.0 78 32-115 6-99 (99)
27 2fnj_C Transcription elongatio 98.6 1.8E-07 6.1E-12 61.4 6.6 78 32-115 3-96 (96)
28 3v7d_A Suppressor of kinetocho 98.4 6.5E-07 2.2E-11 64.7 5.9 89 31-124 8-127 (169)
29 1vcb_B Protein (elongin C); tu 98.1 8.9E-06 3E-10 54.7 6.0 80 31-115 18-112 (112)
30 3drx_A BTB/POZ domain-containi 97.9 1.2E-05 4E-10 59.4 4.0 89 31-125 13-109 (202)
31 2eqx_A Kelch repeat and BTB do 97.7 2.3E-05 7.8E-10 52.0 3.7 65 95-187 5-69 (105)
32 1s1g_A Potassium voltage-gated 97.5 0.00011 3.7E-09 50.2 4.5 84 30-122 13-104 (124)
33 2nz0_B Potassium voltage-gated 97.4 0.0002 6.9E-09 49.9 4.7 86 29-123 34-127 (140)
34 1t1d_A Protein (potassium chan 97.4 0.00014 5E-09 47.7 3.5 82 32-119 3-90 (100)
35 3kvt_A Potassium channel prote 97.4 0.00017 5.8E-09 48.6 4.0 86 31-122 6-97 (115)
36 1nn7_A Potassium channel KV4.2 97.2 0.00012 4E-09 48.6 1.3 82 32-122 2-91 (105)
37 2r9r_B Paddle chimera voltage 93.8 0.056 1.9E-06 45.4 4.3 83 31-119 53-141 (514)
38 3htm_A Speckle-type POZ protei 49.6 9.5 0.00033 26.2 2.3 28 97-124 131-158 (172)
39 3hqi_A Speckle-type POZ protei 37.0 18 0.00062 27.6 2.3 27 98-124 272-298 (312)
40 3hve_A Gigaxonin; ubiquitin, c 26.5 29 0.00098 25.6 1.8 29 97-125 130-158 (256)
41 3i3n_A Kelch-like protein 11; 26.0 35 0.0012 25.5 2.2 29 97-125 138-166 (279)
42 1o6d_A Hypothetical UPF0247 pr 23.1 70 0.0024 22.3 3.1 23 14-38 81-103 (163)
43 1ns5_A Hypothetical protein YB 21.9 68 0.0023 22.1 2.8 23 14-38 82-104 (155)
No 1
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=100.00 E-value=1.2e-33 Score=219.69 Aligned_cols=181 Identities=17% Similarity=0.204 Sum_probs=131.8
Q ss_pred CCCeeeeeeCCChhHHHHHHHHHHhCCCceeEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCC----CCCCCeEEe
Q psy13247 1 MDDEFCLKWKNHTSNLTDVLSKFLQDESLVDVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLEN----THPHPIIFL 76 (187)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~----e~~~~~i~l 76 (187)
|+....+++++|+..+++.+++++.++.+|||++.|+| +.|+|||.||+++|+||++||.++ ++....|.+
T Consensus 3 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~-----~~f~~Hr~vLaa~S~yF~~mf~~~~~~~e~~~~~i~l 77 (256)
T 3hve_A 3 MAEGSAVSDPQHAARLLRALSSFREESRFCDAHLVLDG-----EEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIEL 77 (256)
T ss_dssp -------CCTTTHHHHHHHHHTCCC--CCCCEEEEETT-----EEEEECHHHHHTTCHHHHHTC-----------CEEEC
T ss_pred CCCCCccCChHHHHHHHHHHHHHHhcCCCcceEEEECC-----EEEechHHHHHHcCHHHHHHhCCCCCcccCCCCeEEe
Confidence 66778899999999999999999999999999999999 999999999999999999999876 356789999
Q ss_pred CCCCHHHHHHHhcccccceeccCcccHHHHHHHHhhcCccchHhhcCCCCCCcchhhccCCCCCcccchhHHHHHhhhh-
Q psy13247 77 RDIHHKELEVILHFMYRGEVNIKQDSLKQVLETAKVLMVRGLCEENSPNGAGEILRERASSPSVTKDDVNTRKRKMETG- 155 (187)
Q Consensus 77 ~~~~~~~~~~lL~~~Yt~~~~i~~~~~~~ll~~A~~~~~~~L~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~- 155 (187)
+++++++|+.+++|+|||++.++.+++.+++.+|++|++++|++.|+.++.... ...++...+..+..+++..+.+.+
T Consensus 78 ~~v~~~~f~~ll~~~Yt~~~~i~~~~v~~ll~~A~~l~i~~l~~~c~~~L~~~l-~~~n~~~i~~~A~~~~~~~L~~~~~ 156 (256)
T 3hve_A 78 EGISVMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFLEGCI-AAENCIGIRDFALHYCLHHVHYLAT 156 (256)
T ss_dssp SSCCHHHHHHHHHHHHHSCCCCC-CCHHHHHHHHHHHTCHHHHHHHHHHHHHTC-CSSTTHHHHHHHHHTTCHHHHHHHH
T ss_pred CCCCHHHHHHHHhhccCCCCcccHhHHHHHHHHHHHHChHHHHHHHHHHHHhhC-CHhhHHHHHHHHHHcCcHHHHHHHH
Confidence 999999999999999999999999999999999999999999999965322111 111111223344445555555544
Q ss_pred -------hhhcCcccccCCChhHhhhhccCCCccccCCC
Q psy13247 156 -------AQYCDRENYVNSPKLHTSSSMSSSLSEVPAAQ 187 (187)
Q Consensus 156 -------~~~~~~~~f~~l~~~~l~~ils~~~L~v~~~~ 187 (187)
.++..+++|..||.+.+..+|++++|+|.+|+
T Consensus 157 ~~i~~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~v~~E~ 195 (256)
T 3hve_A 157 EYLETHFRDVSSTEEFLELSPQKLKEVISLEKLNVGNER 195 (256)
T ss_dssp HHHHHHHHHHTTCHHHHSSCHHHHHHHHHCC-------C
T ss_pred HHHHHHHHHHhCCcchhcCCHHHHHHHHccCCCCCCCHH
Confidence 44455599999999999999999999998774
No 2
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=99.97 E-value=9.4e-33 Score=217.12 Aligned_cols=173 Identities=18% Similarity=0.236 Sum_probs=142.8
Q ss_pred CeeeeeeCCChhHHHHHHHHHHhCCCceeEEEEeC---CCCCcceEEehhhHHhhccCHHHHHhhcCC--CCCCCeEEeC
Q psy13247 3 DEFCLKWKNHTSNLTDVLSKFLQDESLVDVTLACN---WENSDIKTYKAHQMILSACSPYFEKLFLEN--THPHPIIFLR 77 (187)
Q Consensus 3 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~i~v~---~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~--e~~~~~i~l~ 77 (187)
+...+.+++|+..+++.+++++++|.+|||+|.|+ | +.|+|||.||+++|+||++||.++ ++....|.++
T Consensus 6 ~~~~~~~~~h~~~ll~~l~~l~~~~~~~Dv~l~v~~~~~-----~~f~~Hr~vLaa~S~yF~~mf~~~~~e~~~~~i~l~ 80 (279)
T 3i3n_A 6 EAEDFECSSHCSELSWRQNEQRRQGLFCDITLCFGGAGG-----REFRAHRSVLAAATEYFTPLLSGQFSESRSGRVEMR 80 (279)
T ss_dssp CEEEEECTTHHHHHHHHHHHHHHHTTTCCEEEECC---------CEEEECHHHHHHHCTTSGGGCCC--------EEECC
T ss_pred cccCcCCHhHHHHHHHHHHHHHhcCCCCCeEEEEcCCCC-----eEEehHHHHHHHcCHHHHHHhcCCCccccCCeEEec
Confidence 45778999999999999999999999999999998 6 999999999999999999999987 6777899998
Q ss_pred ------CCCHHHHHHHhcccccceeccCcccHHHHHHHHhhcCccchHhhcCCCCCCcchhhccCCCC-----Ccccchh
Q psy13247 78 ------DIHHKELEVILHFMYRGEVNIKQDSLKQVLETAKVLMVRGLCEENSPNGAGEILRERASSPS-----VTKDDVN 146 (187)
Q Consensus 78 ------~~~~~~~~~lL~~~Yt~~~~i~~~~~~~ll~~A~~~~~~~L~~~c~~~~~~~~~~~~~~~~~-----~~~~~~~ 146 (187)
++++++|..+++|+|||++.++.+++.+++.+|++|++++|++.|+.+ +... ..+. +..+..+
T Consensus 81 ~~~~~~~v~~~~f~~ll~~~Ytg~~~i~~~~v~~ll~~A~~l~i~~L~~~c~~~-----L~~~-l~~~n~~~i~~~A~~~ 154 (279)
T 3i3n_A 81 KWSSEPGPEPDTVEAVIEYMYTGRIRVSTGSVHEVLELADRFLLIRLKEFCGEF-----LKKK-LHLSNCVAIHSLAHMY 154 (279)
T ss_dssp CCSSTTCSCHHHHHHHHHHHHHSEEEEETTTHHHHHHHHHHTTCHHHHHHHHHH-----HHHH-CCTTTHHHHHHHHHHT
T ss_pred cccccCCCCHHHHHHHHHhhCcCCcccCHHHHHHHHHHHHHHCcHHHHHHHHHH-----HHHc-CCcchHHHHHHHHHHc
Confidence 899999999999999999999999999999999999999999999553 2222 2222 3344444
Q ss_pred HHHHHhhh--------hhhhcCcccccCCChhHhhhhccCCCccccCC
Q psy13247 147 TRKRKMET--------GAQYCDRENYVNSPKLHTSSSMSSSLSEVPAA 186 (187)
Q Consensus 147 ~~~~l~~~--------~~~~~~~~~f~~l~~~~l~~ils~~~L~v~~~ 186 (187)
++..+.+. +..+..+++|..||.+.+..+|++++|+|.+|
T Consensus 155 ~~~~L~~~~~~~i~~~f~~v~~~~~f~~L~~~~l~~lL~~d~L~v~sE 202 (279)
T 3i3n_A 155 TLSQLALKAADMIRRNFHKVIQDEEFYTLPFHLIRDWLSDLEITVDSE 202 (279)
T ss_dssp TCHHHHHHHHHHHHHTHHHHTTSSGGGGSCHHHHHHHHTCSSCCCSCH
T ss_pred CcHHHHHHHHHHHHHHHHHHhcCcChhcCCHHHHHHHhcCcCCCCCCH
Confidence 55445444 44445559999999999999999999999876
No 3
>2ihc_A Transcription regulator protein BACH1; BRIC-A-BRAC domain,transcription factor, protein-PROT interaction; 2.44A {Homo sapiens}
Probab=99.96 E-value=6.2e-30 Score=178.18 Aligned_cols=119 Identities=22% Similarity=0.364 Sum_probs=110.0
Q ss_pred CeeeeeeCCChhHHHHHHHHHHhCCCceeEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCCCCCCCeEEeC-CCCH
Q psy13247 3 DEFCLKWKNHTSNLTDVLSKFLQDESLVDVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLENTHPHPIIFLR-DIHH 81 (187)
Q Consensus 3 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~e~~~~~i~l~-~~~~ 81 (187)
+.+.+++++|+..+.+.++++++++.+|||++.++| +.|+|||.||+++|+||++||.++......|.++ ++++
T Consensus 3 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~-----~~~~aHk~vLaa~S~yF~~mf~~~~~e~~~i~l~~~v~~ 77 (124)
T 2ihc_A 3 SVFAYESSVHSTNVLLSLNDQRKKDVLCDVTIFVEG-----QRFRAHRSVLAACSSYFHSRIVGQADGELNITLPEEVTV 77 (124)
T ss_dssp CEEEEECSSHHHHHHHHHHHHHHHTCSCCEEEEETT-----EEEEECHHHHHHHBHHHHHHHTTC---CEEEECCTTSCH
T ss_pred ceeeecCcchHHHHHHHHHHHHhcCCCcCEEEEECC-----EEEecHHHHHHHcCHHHHHHHcCCCCCCceEeecCCcCH
Confidence 467899999999999999999999999999999999 9999999999999999999999875555789994 8999
Q ss_pred HHHHHHhcccccceeccCcccHHHHHHHHhhcCccchHhhcCCCC
Q psy13247 82 KELEVILHFMYRGEVNIKQDSLKQVLETAKVLMVRGLCEENSPNG 126 (187)
Q Consensus 82 ~~~~~lL~~~Yt~~~~i~~~~~~~ll~~A~~~~~~~L~~~c~~~~ 126 (187)
++|+.+|+|+|||++.++.+++.+++.+|++|++++|++.|++++
T Consensus 78 ~~f~~lL~~iYtg~~~i~~~~v~~ll~~A~~~~~~~L~~~C~~~l 122 (124)
T 2ihc_A 78 KGFEPLIQFAYTAKLILSKENVDEVCKCVEFLSVHNIEESCFQFL 122 (124)
T ss_dssp HHHHHHHHHHHHSEEEEETTTHHHHHHHHHHHTBSSCCGGGGGTC
T ss_pred HHHHHHHHHhcCCCcccCHHHHHHHHHHHHHHCCHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999997653
No 4
>3ohu_A Transcription regulator protein BACH2; BTB/POZ domain; 2.10A {Homo sapiens} SCOP: d.42.1.0 PDB: 3ohv_A
Probab=99.96 E-value=1.7e-29 Score=176.12 Aligned_cols=118 Identities=22% Similarity=0.408 Sum_probs=111.7
Q ss_pred CeeeeeeCCChhHHHHHHHHHHhCCCceeEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCCCCCCCeEEeCC-CCH
Q psy13247 3 DEFCLKWKNHTSNLTDVLSKFLQDESLVDVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLENTHPHPIIFLRD-IHH 81 (187)
Q Consensus 3 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~e~~~~~i~l~~-~~~ 81 (187)
....+.+++|+..+.+.++++++++.+|||++.++| +.|+|||.||+++|+||++||.++......|.+++ +++
T Consensus 6 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~-----~~f~aHk~vLaa~S~yF~~~f~~~~~e~~~i~l~~~~~~ 80 (125)
T 3ohu_A 6 PMYVYESTVHCTNILLGLNDQRKKDILCDVTLIVER-----KEFRAHRAVLAACSEYFWQALVGQTKNDLVVSLPEEVTA 80 (125)
T ss_dssp CCEEEECSSHHHHHHHHHHHHHHHTCSCCEEEEETT-----EEEEECHHHHHHHBHHHHHHHTTCCCSSCEEECCTTCCH
T ss_pred cceeeecHHHHHHHHHHHHHHHhcCCccceEEEECC-----EEEechHHHHHHcCHHHHHHhcCCCCCCcEEEeCCCCCH
Confidence 456788999999999999999999999999999999 99999999999999999999998765578999998 999
Q ss_pred HHHHHHhcccccceeccCcccHHHHHHHHhhcCccchHhhcCCC
Q psy13247 82 KELEVILHFMYRGEVNIKQDSLKQVLETAKVLMVRGLCEENSPN 125 (187)
Q Consensus 82 ~~~~~lL~~~Yt~~~~i~~~~~~~ll~~A~~~~~~~L~~~c~~~ 125 (187)
++|+.+|+|+|||++.++.+++.+++.+|++|++++|++.|+++
T Consensus 81 ~~f~~~l~~iYtg~~~~~~~~v~~ll~~A~~l~i~~L~~~C~~~ 124 (125)
T 3ohu_A 81 RGFGPLLQFAYTAKLLLSRENIREVIRCAEFLRMHNLEDSCFSF 124 (125)
T ss_dssp HHHHHHHHHHTTSEEEECTTTHHHHHHHHHHHTBSSCTTSSCCC
T ss_pred HHHHHHHHhHcCCceEECHHHHHHHHHHHHHhCCHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999764
No 5
>3ga1_A Nucleus accumbens-associated protein 1; BTB/POZ domain, phosphoprotein, repressor, transcri transcription regulation; 2.10A {Homo sapiens}
Probab=99.96 E-value=1.2e-29 Score=177.92 Aligned_cols=119 Identities=20% Similarity=0.357 Sum_probs=108.4
Q ss_pred CCCeeeeeeCCChhHHHHHHHHHHhCCCceeEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCCCCCCCeEEeC-CC
Q psy13247 1 MDDEFCLKWKNHTSNLTDVLSKFLQDESLVDVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLENTHPHPIIFLR-DI 79 (187)
Q Consensus 1 ~~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~e~~~~~i~l~-~~ 79 (187)
|.+.+.+.+++|+..+.+.++++++++.+|||++.++| +.|+|||.||+++|+||++||.++ ....|.++ ++
T Consensus 5 ~~~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~-----~~~~~Hk~vLaa~S~~F~~~f~~~--~~~~i~l~~~~ 77 (129)
T 3ga1_A 5 SAQTLQMEIPNFGNSILECLNEQRLQGLYCDVSVVVKG-----HAFKAHRAVLAASSSYFRDLFNNS--RSAVVELPAAV 77 (129)
T ss_dssp --CEEEEECTTHHHHHHHHHHHHHHTTCSCCEEEEETT-----EEEEECHHHHHHHBHHHHHHHHHC--CCSEEECCTTC
T ss_pred CCceEEeecCcHHHHHHHHHHHHHhcCCCcceEEEECC-----EEEEehHHHHHHcCHHHHHHHcCC--CCCEEEECCCC
Confidence 45778999999999999999999999999999999999 999999999999999999999886 66799997 89
Q ss_pred CHHHHHHHhcccccceeccCcccHHHHHHHHhhcCccchHhhcCCCC
Q psy13247 80 HHKELEVILHFMYRGEVNIKQDSLKQVLETAKVLMVRGLCEENSPNG 126 (187)
Q Consensus 80 ~~~~~~~lL~~~Yt~~~~i~~~~~~~ll~~A~~~~~~~L~~~c~~~~ 126 (187)
++++|+.+|+|+|||++.++.+++.+++.+|++|++++|++.|++++
T Consensus 78 ~~~~f~~ll~~iYtg~~~i~~~~~~~ll~~A~~~~i~~l~~~C~~~L 124 (129)
T 3ga1_A 78 QPQSFQQILSFCYTGRLSMNVGDQDLLMYTAGFLQIQEIMEKGTEFF 124 (129)
T ss_dssp CHHHHHHHHHHHHHSEEECCTTTHHHHHHHHHHTTBTTSSCC-----
T ss_pred CHHHHHHHHHHHhCCccccCHHHHHHHHHHHHHhCCHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999997754
No 6
>2ppi_A Gigaxonin; BTB domain, protein degradation, structural genomics, struct genomics consortium, SGC, structural protein; 2.40A {Homo sapiens}
Probab=99.96 E-value=1e-29 Score=181.52 Aligned_cols=120 Identities=21% Similarity=0.320 Sum_probs=109.8
Q ss_pred CCeeeeeeCCChhHHHHHHHHHHhCCCceeEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCC----CCCCCeEEeC
Q psy13247 2 DDEFCLKWKNHTSNLTDVLSKFLQDESLVDVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLEN----THPHPIIFLR 77 (187)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~----e~~~~~i~l~ 77 (187)
-+.+.+++++|+..+.+.+++++.++.+|||+|.++| +.|+|||.||+++|+||++||.++ ++....|.++
T Consensus 20 ~~~~~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~-----~~f~aHk~vLaa~S~yF~~mf~~~~~e~e~~~~~I~l~ 94 (144)
T 2ppi_A 20 FQSMAVSDPQHAARLLRALSSFREESRFCDAHLVLDG-----EEIPVQKNILAAASPYIRTKLNYNPPKDDGSTYKIELE 94 (144)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHTTC--CCCCEEEEETT-----EEEEECHHHHHHHCHHHHHHHHHCC-----CCCEEECC
T ss_pred eeeeeecCcchHHHHHHHHHHHHhcCCCcceEEEECC-----EEEehHHHHHHHcCHHHHHHHcCCCccccCCCcEEEeC
Confidence 3567899999999999999999999999999999999 999999999999999999999876 2567899999
Q ss_pred CCCHHHHHHHhcccccceeccCcccHHHHHHHHhhcCccchHhhcCCCC
Q psy13247 78 DIHHKELEVILHFMYRGEVNIKQDSLKQVLETAKVLMVRGLCEENSPNG 126 (187)
Q Consensus 78 ~~~~~~~~~lL~~~Yt~~~~i~~~~~~~ll~~A~~~~~~~L~~~c~~~~ 126 (187)
++++++|+.+|+|+|||++.++.+++.+|+.+|++|++++|++.|++++
T Consensus 95 ~v~~~~f~~lL~fiYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~L 143 (144)
T 2ppi_A 95 GISVMVMREILDYIFSGQIRLNEDTIQDVVQAADLLLLTDLKTLCCEFL 143 (144)
T ss_dssp SSCHHHHHHHHHHHTTSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHTTC
T ss_pred CCCHHHHHHHHHHHhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHh
Confidence 9999999999999999999999999999999999999999999997643
No 7
>2if5_A Zinc finger and BTB domain-containing protein 7A; POZ domain, POK, proto oncogene, transcription F transcription; 2.00A {Homo sapiens} PDB: 2nn2_A
Probab=99.96 E-value=1.7e-29 Score=174.86 Aligned_cols=115 Identities=19% Similarity=0.422 Sum_probs=107.5
Q ss_pred eeeeeCCChhHHHHHHHHHHhCCCceeEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCC--CCCCCeEEeCCCCHH
Q psy13247 5 FCLKWKNHTSNLTDVLSKFLQDESLVDVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLEN--THPHPIIFLRDIHHK 82 (187)
Q Consensus 5 ~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~--e~~~~~i~l~~~~~~ 82 (187)
+.++|++|+..+.+.++++++++.+|||++.++| +.|+|||.||+++|+||++||.++ ++....|.+++++++
T Consensus 1 i~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~-----~~~~aHk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~ 75 (120)
T 2if5_A 1 IGIPFPDHSSDILSGLNEQRTQGLLCDVVILVEG-----REFPTHRSVLAACSQYFKKLFTSGAVVDQQNVYEIDFVSAE 75 (120)
T ss_dssp CCCCCTTHHHHHHHHHHHHHHTTCSCCEEEEETT-----EEEEECHHHHHHHCHHHHHHHHC-----CCSEEECCSSCHH
T ss_pred CCcCccchHHHHHHHHHHHHhcCCCCCeEEEECC-----EEEeHHHHHHHHhCHHHHHHhcCCccccCCceEEeCCCCHH
Confidence 3578999999999999999999999999999999 999999999999999999999987 667789999999999
Q ss_pred HHHHHhcccccceeccCcccHHHHHHHHhhcCccchHhhcCC
Q psy13247 83 ELEVILHFMYRGEVNIKQDSLKQVLETAKVLMVRGLCEENSP 124 (187)
Q Consensus 83 ~~~~lL~~~Yt~~~~i~~~~~~~ll~~A~~~~~~~L~~~c~~ 124 (187)
+|+.+|+|+|||++.++.+++.+++.+|++|++++|++.|++
T Consensus 76 ~f~~ll~~~Yt~~~~~~~~~~~~ll~~A~~~~i~~L~~~C~~ 117 (120)
T 2if5_A 76 ALTALMDFAYTATLTVSTANVGDILSAARLLEIPAVSHVCAD 117 (120)
T ss_dssp HHHHHHHHHHHSCCCCCGGGHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999954
No 8
>3b84_A Zinc finger and BTB domain-containing protein 48; krueppel related zinc finger protein 3, HKR3, ZBTB48, Z finger, oncogene; 1.74A {Homo sapiens}
Probab=99.96 E-value=4.3e-30 Score=177.73 Aligned_cols=113 Identities=23% Similarity=0.355 Sum_probs=107.1
Q ss_pred eeeCCChhHHHHHHHHHHhCCCceeEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCCCCCCCeEEeCCCCHHHHHH
Q psy13247 7 LKWKNHTSNLTDVLSKFLQDESLVDVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLENTHPHPIIFLRDIHHKELEV 86 (187)
Q Consensus 7 ~~~~~~~~~l~~~l~~~~~~~~~~Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~e~~~~~i~l~~~~~~~~~~ 86 (187)
++|++|+..+++.++++++++.+|||++.++| ++|+|||.||+++|+||++||.++. ...|.++++++++|+.
T Consensus 2 ~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~-----~~f~aHk~vLaa~S~yF~~~f~~~~--~~~i~l~~~~~~~f~~ 74 (119)
T 3b84_A 2 MSFVQHSVRVLQELNKQREKGQYCDATLDVGG-----LVFKAHWSVLACCSHFFQSLYGDGS--GGSVVLPAGFAEIFGL 74 (119)
T ss_dssp CCHHHHHHHHHHHHHHHHHHTCSCCEEEEETT-----EEEEECHHHHHHHCHHHHHHHTTTT--CCCEEECGGGHHHHHH
T ss_pred cccchHHHHHHHHHHHHHhcCCCcceEEEECC-----EEEEeeHHHHhhcCHHHHHHHCCCC--CCeEEeCCCCHHHHHH
Confidence 46789999999999999999999999999999 9999999999999999999998764 6789999999999999
Q ss_pred HhcccccceeccCcccHHHHHHHHhhcCccchHhhcCCCC
Q psy13247 87 ILHFMYRGEVNIKQDSLKQVLETAKVLMVRGLCEENSPNG 126 (187)
Q Consensus 87 lL~~~Yt~~~~i~~~~~~~ll~~A~~~~~~~L~~~c~~~~ 126 (187)
+|+|+|||++.++.+++.+++.+|++|++++|++.|+.++
T Consensus 75 ll~~iYtg~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~~l 114 (119)
T 3b84_A 75 LLDFFYTGHLALTSGNRDQVLLAARELRVPEAVELCQSFK 114 (119)
T ss_dssp HHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCC
T ss_pred HHHHHcCCCCccCHHHHHHHHHHHHHhCcHHHHHHHHHHH
Confidence 9999999999999999999999999999999999997654
No 9
>2z8h_A Transcription regulator protein BACH1; BTB, POZ, disulfide bond, activator, DNA-binding, nucleus, phosphorylation, repressor; 2.50A {Mus musculus}
Probab=99.96 E-value=1.3e-29 Score=179.74 Aligned_cols=120 Identities=23% Similarity=0.376 Sum_probs=111.9
Q ss_pred CeeeeeeCCChhHHHHHHHHHHhCCCceeEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCCCCCCCeEEeC-CCCH
Q psy13247 3 DEFCLKWKNHTSNLTDVLSKFLQDESLVDVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLENTHPHPIIFLR-DIHH 81 (187)
Q Consensus 3 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~e~~~~~i~l~-~~~~ 81 (187)
+.+.+++++|+..+.+.+++++.++.+|||+|.++| +.|+|||.||+++|+||++||.++......|.++ ++++
T Consensus 10 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~-----~~f~aHk~vLaa~S~yF~~~f~~~~~e~~~i~l~~~v~~ 84 (138)
T 2z8h_A 10 AVFAYESSVHSTNVLLSLNDQRKKDVLCDVTVLVEG-----QRFRAHRSVLAACSSYFHSRIVGQTDAELTVTLPEEVTV 84 (138)
T ss_dssp CCCCCCCSSHHHHHHHHHHHHHHHTCSCCEEEEETT-----EEEEECHHHHHHHCHHHHHHHTTCCCTTEEEECCTTSCH
T ss_pred CeeEecCCchHHHHHHHHHHHHhhCCCcCeEEEECC-----EEEechHHHHHHcCHHHHHHHhcCCCCCceEEeCCCCCH
Confidence 457889999999999999999999999999999999 9999999999999999999999875556789995 8999
Q ss_pred HHHHHHhcccccceeccCcccHHHHHHHHhhcCccchHhhcCCCCC
Q psy13247 82 KELEVILHFMYRGEVNIKQDSLKQVLETAKVLMVRGLCEENSPNGA 127 (187)
Q Consensus 82 ~~~~~lL~~~Yt~~~~i~~~~~~~ll~~A~~~~~~~L~~~c~~~~~ 127 (187)
++|+.+|+|+|||++.++.+++.+|+.+|++|+++.|++.|..++.
T Consensus 85 ~~~~~lL~~~Ytg~~~i~~~~v~~ll~~A~~~~i~~L~~~C~~~l~ 130 (138)
T 2z8h_A 85 KGFEPLIQFAYTAKLILSKDNVDEVCRCVEFLSVHNIEESCFQFLK 130 (138)
T ss_dssp HHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHHTCGGGHHHHHHHTT
T ss_pred HHHHHHHHHhcCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999966443
No 10
>1buo_A POZ domain, protein (promyelocytic leukemia zinc finger prote; protein-protein interaction domain, transcriptional represso finger protein; 1.90A {Homo sapiens} SCOP: d.42.1.1 PDB: 1cs3_A
Probab=99.96 E-value=6.5e-29 Score=172.26 Aligned_cols=114 Identities=24% Similarity=0.333 Sum_probs=108.2
Q ss_pred CeeeeeeCCChhHHHHHHHHHHhCCCceeEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCCCCCCCeEEeCCCCHH
Q psy13247 3 DEFCLKWKNHTSNLTDVLSKFLQDESLVDVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLENTHPHPIIFLRDIHHK 82 (187)
Q Consensus 3 ~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~e~~~~~i~l~~~~~~ 82 (187)
+.+.+++++|+..+.+.++++++++.+|||++.++| +.|+|||.||+++|+||++||.++ ...|.+++++++
T Consensus 2 ~~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~-----~~f~aHk~vLaa~S~yF~~~f~~~---~~~i~l~~~~~~ 73 (121)
T 1buo_A 2 GMIQLQNPSHPTGLLCKANQMRLAGTLCDVVIMVDS-----QEFHAHRTVLACTSKMFEILFHRN---SQHYTLDFLSPK 73 (121)
T ss_dssp CCCCCCCTTHHHHHHHHHHHHHHHTTTCCEEEEESS-----CEEEECHHHHHHHCHHHHHHTTSC---CSEEEECSSCHH
T ss_pred CceeccCcchHHHHHHHHHHHHhcCCCCCEEEEECC-----EEEehhHHHHhhcCHHHHHHHcCC---CcEEEeCCCCHH
Confidence 347899999999999999999999999999999999 999999999999999999999864 568999999999
Q ss_pred HHHHHhcccccceeccCcccHHHHHHHHhhcCccchHhhcCC
Q psy13247 83 ELEVILHFMYRGEVNIKQDSLKQVLETAKVLMVRGLCEENSP 124 (187)
Q Consensus 83 ~~~~lL~~~Yt~~~~i~~~~~~~ll~~A~~~~~~~L~~~c~~ 124 (187)
+|+.+|+|+|||++.++.+++.+++.+|++|++++|++.|.+
T Consensus 74 ~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~ 115 (121)
T 1buo_A 74 TFQQILEYAYTATLQAKAEDLDDLLYAAEILEIEYLEEQCLK 115 (121)
T ss_dssp HHHHHHHHHHHSCCCCCGGGHHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHhhcCCCcCCCHHHHHHHHHHHHHHCCHHHHHHHHH
Confidence 999999999999999999999999999999999999999954
No 11
>2yy9_A Zinc finger and BTB domain-containing protein 48; mouse, HKR3, structural genomics, NPPSFA; 2.60A {Mus musculus}
Probab=99.96 E-value=4.1e-29 Score=176.48 Aligned_cols=116 Identities=23% Similarity=0.320 Sum_probs=102.7
Q ss_pred eeCCChhHHHHHHHHHHhCCCceeEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCCCCCCCeEEeCCCCHHHHHHH
Q psy13247 8 KWKNHTSNLTDVLSKFLQDESLVDVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLENTHPHPIIFLRDIHHKELEVI 87 (187)
Q Consensus 8 ~~~~~~~~l~~~l~~~~~~~~~~Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~e~~~~~i~l~~~~~~~~~~l 87 (187)
++++|+..+++.++++++++.+|||+|.++| +.|+|||.||+++|+||++||.++. ...|.++++++++|+.+
T Consensus 4 ~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~-----~~f~aHk~vLaa~S~yF~~mf~~~~--~~~i~l~~~~~~~f~~l 76 (135)
T 2yy9_A 4 GSSGHSVRVLQELNKQREKGQYCDATLDVGG-----LVFKAHWSVLACCSHFFQRIYGDGT--GGSVVLPAGFAEIFGLL 76 (135)
T ss_dssp ---CHHHHHHHHHHHHHHTTTTCCEEEEETT-----EEEEECHHHHHHHCHHHHHTCC------CCEEECGGGHHHHHHH
T ss_pred ccccHHHHHHHHHHHHHhcCCCcceEEEECC-----EEEehHHHHHHHhCHHHHHHHcCCC--CCeEEeCCCCHHHHHHH
Confidence 5789999999999999999999999999999 9999999999999999999998754 56899999999999999
Q ss_pred hcccccceeccCcccHHHHHHHHhhcCccchHhhcCCCCCCcc
Q psy13247 88 LHFMYRGEVNIKQDSLKQVLETAKVLMVRGLCEENSPNGAGEI 130 (187)
Q Consensus 88 L~~~Yt~~~~i~~~~~~~ll~~A~~~~~~~L~~~c~~~~~~~~ 130 (187)
|+|+|||++.++.+++.+|+.+|++|+++.|++.|++++....
T Consensus 77 L~fiYtg~~~i~~~~v~~ll~~A~~l~i~~L~~~C~~~l~~~l 119 (135)
T 2yy9_A 77 LDFFYTGHLALTSGNRDQVLLAAKELRVPEAVELCQSFQPQTS 119 (135)
T ss_dssp HHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHHCCC---
T ss_pred HHHHhCCCCCCCHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999977655443
No 12
>2vpk_A Myoneurin; transcription regulation, transcription, metal-binding, alternative splicing, zinc, nucleus, BTB domain, zinc-finger, DNA-binding; 2.00A {Homo sapiens}
Probab=99.95 E-value=2.4e-29 Score=173.20 Aligned_cols=109 Identities=23% Similarity=0.405 Sum_probs=103.5
Q ss_pred eCCChhHHHHHHHHHHhCCCceeEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCCCCCCCeEEeC--CCCHHHHHH
Q psy13247 9 WKNHTSNLTDVLSKFLQDESLVDVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLENTHPHPIIFLR--DIHHKELEV 86 (187)
Q Consensus 9 ~~~~~~~l~~~l~~~~~~~~~~Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~e~~~~~i~l~--~~~~~~~~~ 86 (187)
.++|+..+.+.++++++++.+|||++.++| +.|+|||.||+++|+||++||.++ ..+.|.++ ++++++|+.
T Consensus 2 ~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~-----~~~~aHk~vLaa~S~yF~~~f~~~--~~~~i~l~~~~~~~~~f~~ 74 (116)
T 2vpk_A 2 MSHHCEHLLERLNKQREAGFLCDCTIVIGE-----FQFKAHRNVLASFSEYFGAIYRST--SENNVFLDQSQVKADGFQK 74 (116)
T ss_dssp HHHHHHHHHHHHHHHHHHTCSCCEEEEETT-----EEEEECHHHHHHHCHHHHHHHTTC--CCSCEECCTTTCCHHHHHH
T ss_pred chhHHHHHHHHHHHHHhcCCCCcEEEEECC-----EEEeccHHHHhhcCHHHHHHHcCC--CCCeEEeecCCCCHHHHHH
Confidence 467899999999999999999999999999 999999999999999999999876 46788888 999999999
Q ss_pred HhcccccceeccCcccHHHHHHHHhhcCccchHhhcCC
Q psy13247 87 ILHFMYRGEVNIKQDSLKQVLETAKVLMVRGLCEENSP 124 (187)
Q Consensus 87 lL~~~Yt~~~~i~~~~~~~ll~~A~~~~~~~L~~~c~~ 124 (187)
+|+|+|||++.++.+++.+++.+|++|++++|++.|..
T Consensus 75 ll~~~Yt~~~~~~~~~v~~ll~~A~~~~i~~L~~~C~~ 112 (116)
T 2vpk_A 75 LLEFIYTGTLNLDSWNVKEIHQAADYLKVEEVVTKCKI 112 (116)
T ss_dssp HHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHcCCCcccCHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 99999999999999999999999999999999999954
No 13
>1r29_A B-cell lymphoma 6 protein; BTB domain, transcriptional repression, transcription; 1.30A {Homo sapiens} SCOP: d.42.1.1 PDB: 1r28_A 1r2b_A 3bim_A 3lbz_A* 3e4u_A
Probab=99.95 E-value=1.5e-28 Score=171.80 Aligned_cols=116 Identities=22% Similarity=0.465 Sum_probs=109.1
Q ss_pred eeeeeeCCChhHHHHHHHHHHhCCCceeEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCCCC-CCCeEEe-CCCCH
Q psy13247 4 EFCLKWKNHTSNLTDVLSKFLQDESLVDVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLENTH-PHPIIFL-RDIHH 81 (187)
Q Consensus 4 ~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~e~-~~~~i~l-~~~~~ 81 (187)
...+++++|+..+.+.+++++.++.+|||+|.++| +.|+|||.||+++|+||++||.++.. ....|.+ +++++
T Consensus 4 ~~~~~~~~~~~~l~~~l~~l~~~~~~~Dv~l~v~~-----~~~~aHk~iLaa~S~~F~~~f~~~~~e~~~~i~l~~~~~~ 78 (127)
T 1r29_A 4 DSQIQFTRHASDVLLNLNRLRSRDILTDVVIVVSR-----EQFRAHKTVLMACSGLFYSIFTDQLKRNLSVINLDPEINP 78 (127)
T ss_dssp -CCCCCTTHHHHHHHHHHHHHHTTCSCCEEEEETT-----EEEEECHHHHHHHCHHHHHHHTSTTTTTCSEEECCTTSCH
T ss_pred CccccchhHHHHHHHHHHHHHhcCCCCCEEEEECC-----EEEehHHHHHHHhCHHHHHHhcCCccCCCCEEEeCCCCCH
Confidence 35688999999999999999999999999999999 99999999999999999999998722 6789999 99999
Q ss_pred HHHHHHhcccccceeccCcccHHHHHHHHhhcCccchHhhcCC
Q psy13247 82 KELEVILHFMYRGEVNIKQDSLKQVLETAKVLMVRGLCEENSP 124 (187)
Q Consensus 82 ~~~~~lL~~~Yt~~~~i~~~~~~~ll~~A~~~~~~~L~~~c~~ 124 (187)
++|+.+|+|+|||++.++.+++.+++.+|++|+++.|++.|+.
T Consensus 79 ~~f~~ll~~~Ytg~~~~~~~~~~~ll~~A~~~~i~~L~~~c~~ 121 (127)
T 1r29_A 79 EGFNILLDFMYTSRLNLREGNIMAVMATAMYLQMEHVVDTCRK 121 (127)
T ss_dssp HHHHHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999999954
No 14
>3fkc_A Transcriptional regulator kaiso; zinc finger and BTB domain containing 33, kaiso transcriptio ZNF-kaiso, ZNF348,wugsc:H_DJ525N14.1; 1.70A {Homo sapiens} PDB: 3m4t_A 3m8v_A
Probab=99.95 E-value=4e-28 Score=167.14 Aligned_cols=111 Identities=23% Similarity=0.366 Sum_probs=105.4
Q ss_pred CCeeeeeeCCChhHHHHHHHHHHhCCCceeEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCCCCCCCeEEeCCCCH
Q psy13247 2 DDEFCLKWKNHTSNLTDVLSKFLQDESLVDVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLENTHPHPIIFLRDIHH 81 (187)
Q Consensus 2 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~e~~~~~i~l~~~~~ 81 (187)
++.+.+++++|+..+.+.++++++++.+|||++.++| +.|+|||.||+++|+||++||.++ ...|.++++++
T Consensus 4 ~~~~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~l~v~~-----~~f~aHk~vLaa~S~~F~~~f~~~---~~~i~l~~~~~ 75 (116)
T 3fkc_A 4 RKLISATDIQYSGSLLNSLNEQRGHGLFCDVTVIVED-----RKFRAHKNILSASSTYFHQLFSVA---GQVVELSFIRA 75 (116)
T ss_dssp CCCCCCCCTTHHHHHHHHHHHHHHHTTTCCEEEEETT-----EEEEECHHHHHHHCHHHHHHTTSC---CSEEEECSSCH
T ss_pred CceeeecCccHHHHHHHHHHHHHhcCCceeEEEEECC-----EEEehhHHHHHHcCHHHHHHHcCC---CCEEEeCCCCH
Confidence 5667889999999999999999999999999999999 999999999999999999999875 56899999999
Q ss_pred HHHHHHhccccccee-ccCcccHHHHHHHHhhcCccchHh
Q psy13247 82 KELEVILHFMYRGEV-NIKQDSLKQVLETAKVLMVRGLCE 120 (187)
Q Consensus 82 ~~~~~lL~~~Yt~~~-~i~~~~~~~ll~~A~~~~~~~L~~ 120 (187)
++|+.+|+|+|||++ .++.+++.+++.+|++|++++|++
T Consensus 76 ~~f~~~l~~~Ytg~~~~~~~~~~~~ll~~A~~l~i~~L~~ 115 (116)
T 3fkc_A 76 EIFAEILNYIYSSKIVRVRSDLLDELIKSGQLLGVKFIAA 115 (116)
T ss_dssp HHHHHHHHHHTTSCCCSCCHHHHHHHHHHHHHHTCHHHHT
T ss_pred HHHHHHHHhhcCCCcCCCCHHHHHHHHHHHHHhCccccCc
Confidence 999999999999999 799999999999999999999875
No 15
>2q81_A MIZ-1 protein; BTB/POZ domain, transcription; HET: PG4; 2.10A {Homo sapiens} PDB: 3m52_A
Probab=99.95 E-value=5.1e-29 Score=172.35 Aligned_cols=112 Identities=24% Similarity=0.457 Sum_probs=104.1
Q ss_pred eeeeeCCChhHHHHHHHHHHhCCCceeEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCCCCCCCeEEeCCCCHHHH
Q psy13247 5 FCLKWKNHTSNLTDVLSKFLQDESLVDVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLENTHPHPIIFLRDIHHKEL 84 (187)
Q Consensus 5 ~~~~~~~~~~~l~~~l~~~~~~~~~~Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~e~~~~~i~l~~~~~~~~ 84 (187)
+.+.+++|+..+++.++++++++.+|||++.++| +.|+|||.||+++|+||++||.++ ..+|.++++++++|
T Consensus 3 ~~~~~~~h~~~l~~~l~~l~~~~~~~Dv~l~v~~-----~~~~aHk~vLaa~S~yF~~~f~~~---~~~i~l~~~~~~~f 74 (119)
T 2q81_A 3 LGSDFPQHSQHVLEQLNQQRQLGLLCDCTFVVDG-----VHFKAHKAVLAACSEYFKMLFVDQ---KDVVHLDISNAAGL 74 (119)
T ss_dssp --CCHHHHHHHHHHHHHHHHHHTCSCCEEEEETT-----EEEEECHHHHHHHCHHHHHHHHHC---CSGGGGGGCCHHHH
T ss_pred cccccchHHHHHHHHHHHHHhcCCCcceEEEECC-----EEEehhHHHHHHcCHHHHHHHcCC---CCEEEeCCCCHHHH
Confidence 4566789999999999999999999999999999 999999999999999999999863 45788899999999
Q ss_pred HHHhcccccceeccCcccHHHHHHHHhhcCccchHhhcCC
Q psy13247 85 EVILHFMYRGEVNIKQDSLKQVLETAKVLMVRGLCEENSP 124 (187)
Q Consensus 85 ~~lL~~~Yt~~~~i~~~~~~~ll~~A~~~~~~~L~~~c~~ 124 (187)
+.+|+|+|||++.++.+++.+++.+|++|++++|++.|++
T Consensus 75 ~~ll~~~Ytg~~~i~~~~~~~ll~~A~~l~i~~L~~~C~~ 114 (119)
T 2q81_A 75 GQVLEFMYTAKLSLSPENVDDVLAVATFLQMQDIITACHA 114 (119)
T ss_dssp HHHHHHHHHSCCCCCTTTHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHcCCCCccCHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 9999999999999999999999999999999999999955
No 16
>4eoz_A Speckle-type POZ protein; E3 ubiquitin ligase, nucleus, protein binding; 2.40A {Homo sapiens}
Probab=99.94 E-value=1.5e-27 Score=170.02 Aligned_cols=135 Identities=16% Similarity=0.267 Sum_probs=103.5
Q ss_pred CChhHHHHHHHHHHhCCCceeEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCC--CCCCCeEEeCCCCHHHHHHHh
Q psy13247 11 NHTSNLTDVLSKFLQDESLVDVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLEN--THPHPIIFLRDIHHKELEVIL 88 (187)
Q Consensus 11 ~~~~~l~~~l~~~~~~~~~~Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~--e~~~~~i~l~~~~~~~~~~lL 88 (187)
..+.++.+.++++++++.+|||++.++| +.|+|||.||+++|+||++||.++ ++....|.++++++++|+.+|
T Consensus 7 ~p~~~l~~~l~~l~~~~~~~Dv~l~v~~-----~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~~~~~l 81 (145)
T 4eoz_A 7 VPECRLADELGGLWENSRFTDCCLCVAG-----QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMM 81 (145)
T ss_dssp CCCCCHHHHHHHHHHHTCSCCEEEEETT-----EEEEECHHHHHHHCHHHHHHHHSSSHHHHHTEEEECSSCHHHHHHHH
T ss_pred CChHHHHHHHHHHHhCCCCcceEEEECC-----EEEEeehHHHHHcCHHHHHHHcCCCcCCCCceEEecCCCHHHHHHHH
Confidence 4457899999999999999999999999 999999999999999999999986 445679999999999999999
Q ss_pred cccccceeccCcccHHHHHHHHhhcCccchHhhcCCCCCCcchhhccCCCCCcccchhHHHHH
Q psy13247 89 HFMYRGEVNIKQDSLKQVLETAKVLMVRGLCEENSPNGAGEILRERASSPSVTKDDVNTRKRK 151 (187)
Q Consensus 89 ~~~Yt~~~~i~~~~~~~ll~~A~~~~~~~L~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~l 151 (187)
+|+|||++.++.+++.+++.+|++|++++|++.|+.++.... ...++...+..+..+++..|
T Consensus 82 ~~~Y~~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l-~~~n~~~~l~~A~~~~~~~L 143 (145)
T 4eoz_A 82 CFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNL-SVENAAEILILADLHSADQL 143 (145)
T ss_dssp HHHHHSCCTTGGGTHHHHHHHHHHTTCHHHHHHHHCC--------------------------
T ss_pred HhhccCccCCcHHHHHHHHHHHHHhCHHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHhCHHHh
Confidence 999999999999999999999999999999999988765432 23334455566666655544
No 17
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=99.93 E-value=8.5e-27 Score=170.55 Aligned_cols=147 Identities=16% Similarity=0.257 Sum_probs=121.6
Q ss_pred eCCChhHHHHHHHHHHhCCCceeEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCC--CCCCCeEEeCCCCHHHHHH
Q psy13247 9 WKNHTSNLTDVLSKFLQDESLVDVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLEN--THPHPIIFLRDIHHKELEV 86 (187)
Q Consensus 9 ~~~~~~~l~~~l~~~~~~~~~~Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~--e~~~~~i~l~~~~~~~~~~ 86 (187)
++.++.++.+.+.++++++.+|||+|.++| +.|+|||.||+++|+||++||.++ +.....|.++++++++|+.
T Consensus 14 ~~~p~~~l~~~l~~l~~~~~~~Dv~l~v~~-----~~~~~Hk~iL~~~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~ 88 (172)
T 3htm_A 14 VKVPECRLADELGGLWENSRFTDCCLCVAG-----QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKE 88 (172)
T ss_dssp SCCCCCCHHHHHHHHHHHTCSCCEEEEETT-----EEEEECHHHHHHHCHHHHHHHHSCCCGGGTTEEEECSSCHHHHHH
T ss_pred CCCCHHHHHHHHHHHHhCCCCcceEEEECC-----EEEEeeHHHHHHcCHHHHHHHccCccccCCCeEEecCCCHHHHHH
Confidence 445667899999999999999999999999 999999999999999999999986 5666899999999999999
Q ss_pred HhcccccceeccCcccHHHHHHHHhhcCccchHhhcCCCCCCcchhhccCCCCCcccchhHHHHHhhhhhhhcCc
Q psy13247 87 ILHFMYRGEVNIKQDSLKQVLETAKVLMVRGLCEENSPNGAGEILRERASSPSVTKDDVNTRKRKMETGAQYCDR 161 (187)
Q Consensus 87 lL~~~Yt~~~~i~~~~~~~ll~~A~~~~~~~L~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 161 (187)
+|+|+|||++.++.+++.+++.+|++|++++|++.|..++.... ...++...+..+..+++..+.+.+.+++.+
T Consensus 89 ~l~~~Yt~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~l-~~~n~~~~~~~A~~~~~~~L~~~~~~~i~~ 162 (172)
T 3htm_A 89 MMCFIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNL-SVENAAEILILADLHSADQLKTQAVDFINY 162 (172)
T ss_dssp HHHHHHHSCCTTGGGTHHHHHHHHHHTTCHHHHHHHHHHHHHTC-CTTTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred HHHHHhCCCCCCcHHHHHHHHHHHHHhCcHHHHHHHHHHHHHhC-CHHHHHHHHHHHHHhCcHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999955321110 011111224456667777788887777643
No 18
>2vkp_A BTB/POZ domain-containing protein 6; protein-binding; 1.9A {Homo sapiens}
Probab=99.93 E-value=6.6e-26 Score=154.09 Aligned_cols=100 Identities=22% Similarity=0.391 Sum_probs=89.5
Q ss_pred HHhCCCceeEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCC--CCCCCeEEeCCCCHHHHHHHhcccccceeccCc
Q psy13247 23 FLQDESLVDVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLEN--THPHPIIFLRDIHHKELEVILHFMYRGEVNIKQ 100 (187)
Q Consensus 23 ~~~~~~~~Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~--e~~~~~i~l~~~~~~~~~~lL~~~Yt~~~~i~~ 100 (187)
+++++.+|||++.+++ +++++.|+|||.||+++|+||++||.++ ++. ..|.++++++++|+.+|+|+|||++.++.
T Consensus 2 l~~~~~~~Dv~l~v~~-~~~~~~~~~Hk~iLa~~S~~F~~~f~~~~~e~~-~~i~l~~~~~~~f~~~l~~iYt~~~~~~~ 79 (109)
T 2vkp_A 2 MFNNELMADVHFVVGP-PGATRTVPAHKYVLAVGSSVFYAMFYGDLAEVK-SEIHIPDVEPAAFLILLKYMYSDEIDLEA 79 (109)
T ss_dssp CTTCCTTCCEEEEESS-TTSCEEEEECHHHHHHHCHHHHHHHC------C-CEEEETTSCHHHHHHHHHHHHHCCCCCCT
T ss_pred cccCCCcccEEEEECC-CCCcEEEEeeHHHHHHcCHHHHHHhcCCcccCC-CeEEeCCCCHHHHHHHHHHHcCCCccCCH
Confidence 6789999999999987 2334799999999999999999999987 444 89999999999999999999999999999
Q ss_pred ccHHHHHHHHhhcCccchHhhcCC
Q psy13247 101 DSLKQVLETAKVLMVRGLCEENSP 124 (187)
Q Consensus 101 ~~~~~ll~~A~~~~~~~L~~~c~~ 124 (187)
+++.+++.+|++|+++.|++.|..
T Consensus 80 ~~~~~ll~~A~~~~~~~L~~~c~~ 103 (109)
T 2vkp_A 80 DTVLATLYAAKKYIVPALAKACVN 103 (109)
T ss_dssp TTHHHHHHHHHHTTCHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCcHHHHHHHHH
Confidence 999999999999999999999954
No 19
>3m5b_A Zinc finger and BTB domain-containing protein 32; POZ domain, BTB/POZ domain, ZBTB32, zinc finger domain-containing protein 32; 2.00A {Homo sapiens} SCOP: d.42.1.0
Probab=99.92 E-value=6.7e-26 Score=156.60 Aligned_cols=106 Identities=19% Similarity=0.272 Sum_probs=96.3
Q ss_pred eeeeCCChhHHHHHHHHHHhCCCceeEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCCCCCCCeEEeCCCCHHHHH
Q psy13247 6 CLKWKNHTSNLTDVLSKFLQDESLVDVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLENTHPHPIIFLRDIHHKELE 85 (187)
Q Consensus 6 ~~~~~~~~~~l~~~l~~~~~~~~~~Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~e~~~~~i~l~~~~~~~~~ 85 (187)
....+.++..+++.++ +.++.+|||++.++| +.|+|||.||+++|+||++ ....|.++++++++|+
T Consensus 9 ~~~~~~~~~~~l~~l~--r~~~~~~Dv~l~v~~-----~~f~aHk~vLaa~S~yF~~-------~~~~i~l~~v~~~~f~ 74 (119)
T 3m5b_A 9 RLPSPYGSDRLVQLAA--RLRPALCDTLITVGS-----QEFPAHSLVLAGVSQQLGR-------RGQWALGEGISPSTFA 74 (119)
T ss_dssp EECCTTTTCHHHHHHH--HHTTTTCCEEEEETT-----EEEEECHHHHHTTCGGGCC-------CEEEECCSSCCHHHHH
T ss_pred CCCCCcchHHHHHHHH--HhcCCCcceEEEECC-----EEEeeEHHHHHHcCHHHhc-------CCCEEEeCCCCHHHHH
Confidence 3456678888888886 678999999999999 9999999999999999984 3467999999999999
Q ss_pred HHhcccccceeccCcccHHHHHHHHhhcCccchHhhcCCC
Q psy13247 86 VILHFMYRGEVNIKQDSLKQVLETAKVLMVRGLCEENSPN 125 (187)
Q Consensus 86 ~lL~~~Yt~~~~i~~~~~~~ll~~A~~~~~~~L~~~c~~~ 125 (187)
.+|+|+|||++.++.+++.+++.+|++|+++.|++.|++.
T Consensus 75 ~ll~fiYtg~~~i~~~~v~~ll~aA~~l~i~~l~~~C~~~ 114 (119)
T 3m5b_A 75 QLLNFVYGESVELQPGELRPLQEAARALGVQSLEEACWRA 114 (119)
T ss_dssp HHHHHHTTCCEEECGGGHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHcCCCcCcCHHHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 9999999999999999999999999999999999999653
No 20
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=99.90 E-value=1.6e-24 Score=172.53 Aligned_cols=144 Identities=15% Similarity=0.266 Sum_probs=119.3
Q ss_pred ChhHHHHHHHHHHhCCCceeEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCC--CCCCCeEEeCCCCHHHHHHHhc
Q psy13247 12 HTSNLTDVLSKFLQDESLVDVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLEN--THPHPIIFLRDIHHKELEVILH 89 (187)
Q Consensus 12 ~~~~l~~~l~~~~~~~~~~Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~--e~~~~~i~l~~~~~~~~~~lL~ 89 (187)
.+..+.+.+.+++.++.+|||+|.|+| +.|+|||.||+++|+||++||.++ ++....|.++++++++|+.+|+
T Consensus 157 p~~~l~~~l~~l~~~~~~~Dv~l~v~~-----~~f~~Hk~vLaa~S~~F~~~f~~~~~e~~~~~i~l~~~~~~~f~~~L~ 231 (312)
T 3hqi_A 157 PECRLADELGGLWENSRFTDCCLCVAG-----QEFQAHKAILAARSPVFSAMFEHEMEESKKNRVEINDVEPEVFKEMMC 231 (312)
T ss_dssp CCCCHHHHHHHHHHTTCSCCEEEEETT-----EEEEECHHHHHHHCHHHHHHTTC-----CCSEEEECSSCHHHHHHHHH
T ss_pred CCchHHHHHHHHHhCCCCCceEEEECC-----EEEeHHHHHHHHcCHHHHHHhccCccccCCceEEecCCCHHHHHHHHH
Confidence 345789999999999999999999999 999999999999999999999986 6777899999999999999999
Q ss_pred ccccceeccCcccHHHHHHHHhhcCccchHhhcCCCCCCcchhhccCCCCCcccchhHHHHHhhhhhhhcCc
Q psy13247 90 FMYRGEVNIKQDSLKQVLETAKVLMVRGLCEENSPNGAGEILRERASSPSVTKDDVNTRKRKMETGAQYCDR 161 (187)
Q Consensus 90 ~~Yt~~~~i~~~~~~~ll~~A~~~~~~~L~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~ 161 (187)
|+|||.+.++.+++.+|+.+|++|+++.|++.|+..+.... ...++...+..+..+++..+.+.+.+++..
T Consensus 232 ~iYt~~~~~~~~~~~~ll~~A~~~~~~~l~~~c~~~l~~~~-~~~n~~~~l~~A~~~~~~~L~~~~~~~i~~ 302 (312)
T 3hqi_A 232 FIYTGKAPNLDKMADDLLAAADKYALERLKVMCEDALCSNL-SVENAAEILILADLHSADQLKTQAVDFINY 302 (312)
T ss_dssp HHHHSCCTTHHHHHHHHHHHHHHTTCHHHHHHHHHHHHTTC-CTTTHHHHHHHHHHTTCHHHHHHHHHHHHH
T ss_pred hhcCCCCCChHHHHHHHHHHHHHhCHHHHHHHHHHHHHccC-CHHHHHHHHHHHHHhCCHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999965321111 111122225566777888888888888754
No 21
>2ast_A S-phase kinase-associated protein 1A; SCF-substrate complex, LRR, cell cycle, protein turnover COM ligase-ligase inhibitor complex; HET: TPO; 2.30A {Homo sapiens} PDB: 2ass_A* 2e31_B 2e32_B 3l2o_A 1p22_B* 2ovr_A* 2ovp_A 1fqv_B* 2ovq_A*
Probab=99.39 E-value=3.6e-13 Score=97.06 Aligned_cols=87 Identities=13% Similarity=0.244 Sum_probs=74.4
Q ss_pred EEEEe-CCCCCcceEEehhhHHhhccCHHHHHhhcC-C---CCCCCeEEeCCCCHHHHHHHhcccccce-----------
Q psy13247 32 VTLAC-NWENSDIKTYKAHQMILSACSPYFEKLFLE-N---THPHPIIFLRDIHHKELEVILHFMYRGE----------- 95 (187)
Q Consensus 32 v~i~v-~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~-~---e~~~~~i~l~~~~~~~~~~lL~~~Yt~~----------- 95 (187)
|++.+ +| ..|.+||.+ ++.|+||+.||.+ + +.....|.|++++..++..+++|+|++.
T Consensus 3 v~L~ssDg-----~~f~v~~~v-A~~S~~i~~m~~~~~~~~e~~~~~Ipl~~V~~~iL~kViey~~~h~~~~~~~~~~~~ 76 (159)
T 2ast_A 3 IKLQSSDG-----EIFEVDVEI-AKQSVTIKTMLEDLGMDDEGDDDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDEN 76 (159)
T ss_dssp EEEECTTS-----CEEEEEHHH-HHTCHHHHHHTTSSCSS------CEECTTSCHHHHHHHHHHHHHTTTCCC-------
T ss_pred EEEEcCCC-----CEEEeCHHH-HHHhHHHHHHHHhcCCcccccCCCcCCCCccHHHHHHHHHHHHHcCcCCCCcccccc
Confidence 56665 45 999999999 8999999999987 3 4455789999999999999999999877
Q ss_pred ---------------eccCcccHHHHHHHHhhcCccchHhhcCC
Q psy13247 96 ---------------VNIKQDSLKQVLETAKVLMVRGLCEENSP 124 (187)
Q Consensus 96 ---------------~~i~~~~~~~ll~~A~~~~~~~L~~~c~~ 124 (187)
+.++.+++.+|+.||++|++.+|.+.|++
T Consensus 77 ~~~~~~~i~~wD~~F~~id~~~l~eLl~AAnyL~I~~Lld~~c~ 120 (159)
T 2ast_A 77 KEKRTDDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCK 120 (159)
T ss_dssp ----CCCCCHHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred cccchhhhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 67888999999999999999999999955
No 22
>4ajy_C Transcription elongation factor B polypeptide 1; E3 ubiquitin ligase, transcription factor, hypoxic signaling transcription; 1.73A {Homo sapiens} PDB: 2izv_C 3dcg_B 3zrc_B* 3zrf_B 3ztc_B* 3ztd_B* 3zun_B* 2c9w_C 4awj_B* 4b95_B* 4b9k_B* 2fnj_C 1lqb_B 1lm8_C 2jz3_C 2xai_B 4b9k_E*
Probab=99.34 E-value=3.5e-12 Score=84.34 Aligned_cols=79 Identities=14% Similarity=0.150 Sum_probs=65.0
Q ss_pred EEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCC----CCCCCeEEeCCCCHHHHHHHhcccc-----c---ceec--
Q psy13247 32 VTLACNWENSDIKTYKAHQMILSACSPYFEKLFLEN----THPHPIIFLRDIHHKELEVILHFMY-----R---GEVN-- 97 (187)
Q Consensus 32 v~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~----e~~~~~i~l~~~~~~~~~~lL~~~Y-----t---~~~~-- 97 (187)
|++...++ ..|.|||.+ |+.|++|+.||.+. +.....|.|++++..+++.+++|+| + +++.
T Consensus 4 v~L~SsDg----~~F~v~r~v-A~~S~~ik~m~~~~~~~~E~~~~~I~l~~V~~~iL~kViey~~~h~~~~~~~~~i~~~ 78 (97)
T 4ajy_C 4 VKLISSDG----HEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPEF 78 (97)
T ss_dssp EEEECTTC----CEEEEEHHH-HTTSHHHHHHHCCC--------CEEECTTSCHHHHHHHHHHHHHHHHHTTCCSCCCCC
T ss_pred EEEEecCC----cEEEecHHH-HHHhHHHHHHHHhCCCccccCCCceECCCCCHHHHHHHHHHHHHhcccCCCcCCCCcC
Confidence 45555332 899999999 99999999999863 4557899999999999999999999 5 5666
Q ss_pred -cCcccHHHHHHHHhhcCc
Q psy13247 98 -IKQDSLKQVLETAKVLMV 115 (187)
Q Consensus 98 -i~~~~~~~ll~~A~~~~~ 115 (187)
++.+++.+|+.||+++++
T Consensus 79 ~i~~~~l~eLl~AAnyL~~ 97 (97)
T 4ajy_C 79 PIAPEIALELLMAANFLDC 97 (97)
T ss_dssp CCCGGGHHHHHHHHHHHTC
T ss_pred cCCHHHHHHHHHHHhhhCC
Confidence 889999999999999874
No 23
>1fs1_B SKP1, cyclin A/CDK2-associated P45; F-BOX, LRR, leucine-rich repeat, SCF, ubiquitin, ubiquitin protein ligase; 1.80A {Homo sapiens} SCOP: a.157.1.1 d.42.1.1 PDB: 1fs2_B 1ldk_D
Probab=99.10 E-value=7e-11 Score=83.31 Aligned_cols=86 Identities=13% Similarity=0.218 Sum_probs=74.1
Q ss_pred EEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCCCCCCCeEEeCCCCHHHHHHHhcccccce----------------
Q psy13247 32 VTLACNWENSDIKTYKAHQMILSACSPYFEKLFLENTHPHPIIFLRDIHHKELEVILHFMYRGE---------------- 95 (187)
Q Consensus 32 v~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~e~~~~~i~l~~~~~~~~~~lL~~~Yt~~---------------- 95 (187)
|++...++ ..|.+|+.+ +..|++++.|+.... ...|.+++++..+++.+++|+|...
T Consensus 4 v~L~SsDg----~~f~v~~~v-A~~S~~ik~ml~~~~--~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~~ 76 (141)
T 1fs1_B 4 IKLQSSDG----EIFEVDVEI-AKQSVTIKTMLEDLG--MDPVPLPNVNAAILKKVIQWCTHHKDDPPPPEDDENKEKRT 76 (141)
T ss_dssp EEEECTTS----CEEEEEGGG-GGTCHHHHHHHHHTC--CSSEECTTCCHHHHHHHHHHHHHHTTCC-------------
T ss_pred EEEEeCCC----CEEEecHHH-HHHhHHHHHHHHhcC--CCceecCCcCHHHHHHHHHHHHHhccCCCccccccccccch
Confidence 56666332 999999998 889999999998642 5689999999999999999999754
Q ss_pred ----------eccCcccHHHHHHHHhhcCccchHhhcCC
Q psy13247 96 ----------VNIKQDSLKQVLETAKVLMVRGLCEENSP 124 (187)
Q Consensus 96 ----------~~i~~~~~~~ll~~A~~~~~~~L~~~c~~ 124 (187)
+.++.+++.+|+.||.++++.+|.+.|++
T Consensus 77 ~~i~~wD~~F~~vd~~~l~eLi~AAnyL~I~~Lldl~c~ 115 (141)
T 1fs1_B 77 DDIPVWDQEFLKVDQGTLFELILAANYLDIKGLLDVTCK 115 (141)
T ss_dssp ----HHHHHHTCSCHHHHHHHHHHHHHHTCHHHHHHHHH
T ss_pred hhhhHHHHHHHhCCHHHHHHHHHHHHHHhhhHHHHHHHH
Confidence 56788899999999999999999999954
No 24
>2p1m_A SKP1-like protein 1A; F-BOX, leucine rich repeat, signaling protein; HET: IHP; 1.80A {Arabidopsis thaliana} PDB: 2p1n_A* 2p1o_A* 2p1p_A* 2p1q_A* 3c6n_A* 3c6o_A* 3c6p_A* 3ogk_A* 3ogl_A* 3ogm_A*
Probab=98.91 E-value=1.1e-10 Score=84.00 Aligned_cols=86 Identities=14% Similarity=0.244 Sum_probs=45.7
Q ss_pred EEEEe-CCCCCcceEEehhhHHhhccCHHHHHhhcCCCCCCCeEEeCCCCHHHHHHHhcccccce---------------
Q psy13247 32 VTLAC-NWENSDIKTYKAHQMILSACSPYFEKLFLENTHPHPIIFLRDIHHKELEVILHFMYRGE--------------- 95 (187)
Q Consensus 32 v~i~v-~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~e~~~~~i~l~~~~~~~~~~lL~~~Yt~~--------------- 95 (187)
|++.. +| ..|.+|+.+ |..|++|+.|+.+. .....|.|++++..++..+++|+|...
T Consensus 6 v~L~SsDg-----~~f~v~~~v-A~~S~~ik~ml~~~-~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~~~~~~~~ 78 (160)
T 2p1m_A 6 IVLKSSDG-----ESFEVEEAV-ALESQTIAHMVEDD-CVDNGVPLPNVTSKILAKVIEYCKRHVEAAASKAEAVEGAAT 78 (160)
T ss_dssp --CCC--------------CHH-HHTCTTTC-------------CCTTSCHHHHHHHHHC--------------------
T ss_pred EEEEcCCC-----CEEEECHHH-HHHhHHHHHHHHcc-CCCCceeCCcCcHHHHHHHHHHHHHcccCCCccccccccccc
Confidence 55555 45 999999999 78999999999764 234579999999999999999999865
Q ss_pred ------------eccCcccHHHHHHHHhhcCccchHhhcCC
Q psy13247 96 ------------VNIKQDSLKQVLETAKVLMVRGLCEENSP 124 (187)
Q Consensus 96 ------------~~i~~~~~~~ll~~A~~~~~~~L~~~c~~ 124 (187)
+.++.+++.+|+.||.++++.+|.+.|++
T Consensus 79 ~~~~i~~wD~~Fl~vd~~~l~eLi~AAnyL~I~~Lldl~c~ 119 (160)
T 2p1m_A 79 SDDDLKAWDADFMKIDQATLFELILAANYLNIKNLLDLTCQ 119 (160)
T ss_dssp ----------------------CHHHHHHTTCHHHHHHHHH
T ss_pred ccchhhHHHHHHHcCCHHHHHHHHHHHHHHhHHHHHHHHHH
Confidence 35778889999999999999999999955
No 25
>3drz_A BTB/POZ domain-containing protein KCTD5; potassium channel domain T1, pentamer, unkno function; 1.90A {Homo sapiens}
Probab=98.67 E-value=7.7e-08 Score=64.42 Aligned_cols=88 Identities=16% Similarity=0.219 Sum_probs=72.5
Q ss_pred eEEEEeCCCCCcceEEehhhHHhhccC-HHHHHhhcCC------CCCCCeEEeCCCCHHHHHHHhcccccceeccCcc-c
Q psy13247 31 DVTLACNWENSDIKTYKAHQMILSACS-PYFEKLFLEN------THPHPIIFLRDIHHKELEVILHFMYRGEVNIKQD-S 102 (187)
Q Consensus 31 Dv~i~v~~~~~~~~~~~~Hk~vL~~~S-~~F~~~~~~~------e~~~~~i~l~~~~~~~~~~lL~~~Yt~~~~i~~~-~ 102 (187)
-|++.||| +.|.+.+..|+..+ .+|.+|+.++ ....+.+.+ |-++..|+.||+|+.+|++.++.+ .
T Consensus 7 ~v~LNVGG-----~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~d~~~~~fi-DRdp~~F~~IL~~lr~g~l~~p~~~~ 80 (107)
T 3drz_A 7 WVRLNVGG-----TYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLA 80 (107)
T ss_dssp EEEEEETT-----EEEEEEHHHHTSSTTSHHHHHHTTCGGGGGGBCTTSCEEE-CSCHHHHHHHHHHHHHSCCCCCTTSC
T ss_pred EEEEEECC-----EEEEECHHHHhcCCCcchhHHHhcCCCCCcCCCCCceEEe-cCChHHHHHHHHHhCCCeeCCCCCCC
Confidence 57899999 99999999999886 3788888754 113455666 689999999999999999987543 3
Q ss_pred HHHHHHHHhhcCccchHhhcCC
Q psy13247 103 LKQVLETAKVLMVRGLCEENSP 124 (187)
Q Consensus 103 ~~~ll~~A~~~~~~~L~~~c~~ 124 (187)
...++.-|.+|++++|++.|..
T Consensus 81 ~~~l~~Ea~fy~l~~L~~~l~~ 102 (107)
T 3drz_A 81 EEGVLEEAEFYNITSLIKLVKD 102 (107)
T ss_dssp HHHHHHHHHHHTCHHHHHHHHH
T ss_pred HHHHHHHHHHCCCHHHHHHHHH
Confidence 5789999999999999999943
No 26
>1hv2_A Elongin C, ELC1; protein-peptide complex, signaling protein; NMR {Saccharomyces cerevisiae} SCOP: d.42.1.1
Probab=98.56 E-value=2.1e-07 Score=61.43 Aligned_cols=78 Identities=19% Similarity=0.236 Sum_probs=64.6
Q ss_pred EEEEe-CCCCCcceEEehhhHHhhccCHHHHHhhcCC-CCCCCeEEeCCCCHHHHHHHhcccccce--------------
Q psy13247 32 VTLAC-NWENSDIKTYKAHQMILSACSPYFEKLFLEN-THPHPIIFLRDIHHKELEVILHFMYRGE-------------- 95 (187)
Q Consensus 32 v~i~v-~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~-e~~~~~i~l~~~~~~~~~~lL~~~Yt~~-------------- 95 (187)
|++.. +| ..|.+++.+ |..|.+++.|+..+ +.....|.|++++..+++.+++|+|...
T Consensus 6 v~L~SsDg-----~~f~V~~~v-A~~S~~ik~ml~~~~e~~~~~Iplp~V~~~iL~kVieyc~~h~~~~~~~~~~~~i~~ 79 (99)
T 1hv2_A 6 VTLVSKDD-----KEYEISRSA-AMISPTLKAMIEGPFRESKGRIELKQFDSHILEKAVEYLNYNLKYSGVSEDDDEIPE 79 (99)
T ss_dssp EEEEETTT-----EEEEEEHHH-HTTCHHHHHHHHSSTTTCTTEEEETTSCHHHHHHHHHHHHHHHHHHHHCSSCSSCCC
T ss_pred EEEEecCC-----CEEEECHHH-HHHhHHHHHHHhcccccCCCceecCCcCHHHHHHHHHHHHHhcccCCCccccccCCC
Confidence 56666 45 999999997 88899999999864 3444789999999999999999998632
Q ss_pred eccCcccHHHHHHHHhhcCc
Q psy13247 96 VNIKQDSLKQVLETAKVLMV 115 (187)
Q Consensus 96 ~~i~~~~~~~ll~~A~~~~~ 115 (187)
..++.+.+.+|+.||.++++
T Consensus 80 w~vd~~~lfeLi~AAnyLdI 99 (99)
T 1hv2_A 80 FEIPTEMSLELLLAADYLSI 99 (99)
T ss_dssp CCCCHHHHHHHHHHHHHHCC
T ss_pred ccCCHHHHHHHHHHHHHhCc
Confidence 35677889999999999874
No 27
>2fnj_C Transcription elongation factor B polypeptide 1; beta-sandwich, lectin-like, SPRY, protein transport/signaling protein complex; 1.80A {Mus musculus} SCOP: d.42.1.1 PDB: 1lqb_B 1lm8_C 2jz3_C 2xai_B 2c9w_C 2izv_C 3dcg_B 3zrc_B* 3zrf_B
Probab=98.56 E-value=1.8e-07 Score=61.39 Aligned_cols=78 Identities=13% Similarity=0.123 Sum_probs=62.6
Q ss_pred EEEEe-CCCCCcceEEehhhHHhhccCHHHHHhhcCC----CCCCCeEEeCCCCHHHHHHHhcccccce-----------
Q psy13247 32 VTLAC-NWENSDIKTYKAHQMILSACSPYFEKLFLEN----THPHPIIFLRDIHHKELEVILHFMYRGE----------- 95 (187)
Q Consensus 32 v~i~v-~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~----e~~~~~i~l~~~~~~~~~~lL~~~Yt~~----------- 95 (187)
|++.. +| ..|.+++.+ |..|.+++.|+... +.....|.|++++..+++.+++|+|...
T Consensus 3 v~L~SsDg-----~~f~V~~~~-A~~S~~ik~ml~~~~~~~e~~~~~Ipl~~V~~~iL~kVieyc~~h~~~~~~~~~i~~ 76 (96)
T 2fnj_C 3 VKLISSDG-----HEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPE 76 (96)
T ss_dssp EEEECTTS-----CEEEEEHHH-HTTSHHHHHHHHCC--------CEEECSSCCHHHHHHHHHHHHHHHHHHSCCSCCCC
T ss_pred EEEEecCC-----CEEEeCHHH-HHHhHHHHHHHHccCCcccccCCceeCCCCCHHHHHHHHHHHHHccccCCCcccCCC
Confidence 45555 44 999999997 78899999999863 3344689999999999999999998633
Q ss_pred eccCcccHHHHHHHHhhcCc
Q psy13247 96 VNIKQDSLKQVLETAKVLMV 115 (187)
Q Consensus 96 ~~i~~~~~~~ll~~A~~~~~ 115 (187)
..++.+.+.+|+.||.++++
T Consensus 77 w~vd~~~l~eLi~AAnyLdI 96 (96)
T 2fnj_C 77 FPIAPEIALELLMAANFLDC 96 (96)
T ss_dssp CCCCTTTHHHHHHHHHHHTC
T ss_pred cccCHHHHHHHHHHHHHhCc
Confidence 35778889999999999874
No 28
>3v7d_A Suppressor of kinetochore protein 1; WD 40 domain, phospho-peptide complex, E3 ubiquitin ligase, cell cycle, phospho binding protein, phosphorylation; HET: SEP; 2.31A {Saccharomyces cerevisiae} PDB: 1nex_A* 3mks_A*
Probab=98.36 E-value=6.5e-07 Score=64.74 Aligned_cols=89 Identities=11% Similarity=0.234 Sum_probs=70.1
Q ss_pred eEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCCC------CCCCeEEeCCCCHHHHHHHhcccccce---------
Q psy13247 31 DVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLENT------HPHPIIFLRDIHHKELEVILHFMYRGE--------- 95 (187)
Q Consensus 31 Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~e------~~~~~i~l~~~~~~~~~~lL~~~Yt~~--------- 95 (187)
-|++...++ ..|.+++.+ +..|..++.|+.... .....|.|++++..++..+++|.+...
T Consensus 8 ~i~L~SsDG----~~F~V~~~v-A~~S~tIk~ml~~~~~~~~~~~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~~ 82 (169)
T 3v7d_A 8 NVVLVSGEG----ERFTVDKKI-AERSLLLKNYLNDMGDDDDEDDDEIVMPVPNVRSSVLQKVIEWAEHHRDSNFPDEDD 82 (169)
T ss_dssp EEEEECTTC----CEEEEEHHH-HTTSHHHHHHHHC-----------CEEECTTCCHHHHHHHHHHHHHTTTCCCCC---
T ss_pred eEEEEeCCC----CEEEecHHH-HHHhHHHHHHHHhcCcccccccCCCceeeCCCCHHHHHHHHHHHHHcccCCCccccc
Confidence 466666442 899999998 667999999998642 223789999999999999999996421
Q ss_pred ----------------eccCcccHHHHHHHHhhcCccchHhhcCC
Q psy13247 96 ----------------VNIKQDSLKQVLETAKVLMVRGLCEENSP 124 (187)
Q Consensus 96 ----------------~~i~~~~~~~ll~~A~~~~~~~L~~~c~~ 124 (187)
+.++...+.+|+.||.+|++.+|...|++
T Consensus 83 ~~~~~~~~i~~wD~~Fl~vd~~~LfeLi~AAnyLdIk~Lldl~c~ 127 (169)
T 3v7d_A 83 DDSRKSAPVDSWDREFLKVDQEMLYEIILAANYLNIKPLLDAGCK 127 (169)
T ss_dssp -----CCCCCHHHHHHTCSCHHHHHHHHHHHHHTTCHHHHHHHHH
T ss_pred ccccccccccHHHHHHHcCCHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 24566778999999999999999999954
No 29
>1vcb_B Protein (elongin C); tumor suppressor, cancer, ubiquitin, beta sandwich, transcription, transcriptional elongation; 2.70A {Homo sapiens} SCOP: d.42.1.1
Probab=98.05 E-value=8.9e-06 Score=54.68 Aligned_cols=80 Identities=13% Similarity=0.095 Sum_probs=62.0
Q ss_pred eEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCC----CCCCCeEEeCCCCHHHHHHHhcccccce-----------
Q psy13247 31 DVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLEN----THPHPIIFLRDIHHKELEVILHFMYRGE----------- 95 (187)
Q Consensus 31 Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~----e~~~~~i~l~~~~~~~~~~lL~~~Yt~~----------- 95 (187)
-|++...++ ..|.+.+.+ +..|..++.|+... +.....|.|++++..+++.+++|++...
T Consensus 18 ~v~L~SsDG----~~F~V~~~~-A~~S~tIk~ml~~~~~~~e~~~~~IplpnV~s~iL~kVieyc~~h~~~~~~~~~i~~ 92 (112)
T 1vcb_B 18 YVKLISSDG----HEFIVKREH-ALTSGTIKAMLSGPGQFAENETNEVNFREIPSHVLSKVCMYFTYKVRYTNSSTEIPE 92 (112)
T ss_dssp EEEEECTTS----CEEEEEHHH-HHTSHHHHHHSSCC--------CEEECSSCCHHHHHHHHHHHHHHHHHSSCSSCCCC
T ss_pred EEEEEcCCC----CEEEECHHH-HHHhHHHHHHHHhcCCcccccCCceeCCCCCHHHHHHHHHHHHHhhhccCCcCCCCC
Confidence 356665432 899999995 67899999999853 3334689999999999999999997532
Q ss_pred eccCcccHHHHHHHHhhcCc
Q psy13247 96 VNIKQDSLKQVLETAKVLMV 115 (187)
Q Consensus 96 ~~i~~~~~~~ll~~A~~~~~ 115 (187)
..++.+.+.+|+.||+++++
T Consensus 93 w~vd~~~lfeLi~AAnyLdI 112 (112)
T 1vcb_B 93 FPIAPEIALELLMAANFLDC 112 (112)
T ss_dssp CCCCHHHHHHHHHHHHHHTC
T ss_pred cccCHHHHHHHHHHHHHhCc
Confidence 35777889999999999874
No 30
>3drx_A BTB/POZ domain-containing protein KCTD5; golgi, grAsp55, potassium channel domain T1, pentameric assembly, HOST-virus interaction, nucleus; 3.11A {Homo sapiens} PDB: 3dry_A
Probab=97.86 E-value=1.2e-05 Score=59.38 Aligned_cols=89 Identities=16% Similarity=0.216 Sum_probs=71.8
Q ss_pred eEEEEeCCCCCcceEEehhhHHhhccCH-HHHHhhcCCC------CCCCeEEeCCCCHHHHHHHhcccccceeccCcc-c
Q psy13247 31 DVTLACNWENSDIKTYKAHQMILSACSP-YFEKLFLENT------HPHPIIFLRDIHHKELEVILHFMYRGEVNIKQD-S 102 (187)
Q Consensus 31 Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~-~F~~~~~~~e------~~~~~i~l~~~~~~~~~~lL~~~Yt~~~~i~~~-~ 102 (187)
=|.|.||| +.|...+..|..... +|..|+.+.. ...+.+.+ |-++..|..||+|+-+|.+.++.+ .
T Consensus 13 ~V~LNVGG-----~~F~Tt~sTL~r~PdS~L~~lfs~~~~~~~~~De~geyFI-DRDP~~F~~ILnyLRtG~L~lP~~~~ 86 (202)
T 3drx_A 13 WVRLNVGG-----TYFLTTRQTLCRDPKSFLYRLCQADPDLDSDKDETGAYLI-DRDPTYFGPVLNYLRHGKLVINKDLA 86 (202)
T ss_dssp EEEEEETT-----EEEEEETTGGGSCTTSSTHHHHSCCCC----BCTTCCEEE-CSCSTTHHHHHHHHHHSCCCCCTTSC
T ss_pred EEEEEECC-----EEEEEeHHHHhCCCcchHHHHhcCccccCcccCCCccEEe-cCChHHHHHHHHHhcCCccCCCCCCC
Confidence 47888999 999999999998753 7888887541 12345655 679999999999999999987543 3
Q ss_pred HHHHHHHHhhcCccchHhhcCCC
Q psy13247 103 LKQVLETAKVLMVRGLCEENSPN 125 (187)
Q Consensus 103 ~~~ll~~A~~~~~~~L~~~c~~~ 125 (187)
...++.-|.+|++++|++.|...
T Consensus 87 ~~~l~eEA~FygL~~Lv~~l~~~ 109 (202)
T 3drx_A 87 EEGVLEEAEFYNITSLIKLVKDK 109 (202)
T ss_dssp HHHHHHHHHHTTCHHHHHHHHHH
T ss_pred HHHHHHHHHHCCcHHHHHHHHHH
Confidence 46799999999999999999543
No 31
>2eqx_A Kelch repeat and BTB domain-containing protein 4; BACK domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=97.74 E-value=2.3e-05 Score=52.01 Aligned_cols=65 Identities=18% Similarity=0.150 Sum_probs=54.2
Q ss_pred eeccCcccHHHHHHHHhhcCccchHhhcCCCCCCcchhhccCCCCCcccchhHHHHHhhhhhhhcCcccccCCChhHhhh
Q psy13247 95 EVNIKQDSLKQVLETAKVLMVRGLCEENSPNGAGEILRERASSPSVTKDDVNTRKRKMETGAQYCDRENYVNSPKLHTSS 174 (187)
Q Consensus 95 ~~~i~~~~~~~ll~~A~~~~~~~L~~~c~~~~~~~~~~~~~~~~~~~~~~~~~~~~l~~~~~~~~~~~~f~~l~~~~l~~ 174 (187)
.-.++.+|...++..|+.|++++|.+.|.. .+...+.+++.+++|..||.+.|..
T Consensus 5 ~~~L~~~NCl~i~~~A~~~~~~~L~~~a~~-------------------------fi~~nF~~v~~~~eFl~L~~~~L~~ 59 (105)
T 2eqx_A 5 SSGVQVGNCLQVMWLADRHSDPELYTAAKH-------------------------CAKTHLAQLQNTEEFLHLPHRLLTD 59 (105)
T ss_dssp CCCCCTTTHHHHHHHHHHTTCHHHHHHHHH-------------------------HHHHTCHHHHTSHHHHHSCHHHHHH
T ss_pred hccCCHHHHHHHHHHHHHcCCHHHHHHHHH-------------------------HHHHHHHHHHhcccHhhCCHHHHHH
Confidence 446789999999999999999999999933 3345677778889999999999999
Q ss_pred hccCCCccccCCC
Q psy13247 175 SMSSSLSEVPAAQ 187 (187)
Q Consensus 175 ils~~~L~v~~~~ 187 (187)
+|+++ |.+|+
T Consensus 60 lL~sd---v~~E~ 69 (105)
T 2eqx_A 60 IISDG---VPCSQ 69 (105)
T ss_dssp HHHTC---EETTS
T ss_pred HHcCC---CCCHH
Confidence 99996 66553
No 32
>1s1g_A Potassium voltage-gated channel subfamily D membe; K+ channels, tetramerization domain, T1 domain, transport PR; 2.60A {Homo sapiens} SCOP: d.42.1.2
Probab=97.51 E-value=0.00011 Score=50.20 Aligned_cols=84 Identities=10% Similarity=0.123 Sum_probs=64.4
Q ss_pred eeEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCC------CCCCCeEEeCCCCHHHHHHHhcccccceeccCcc-c
Q psy13247 30 VDVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLEN------THPHPIIFLRDIHHKELEVILHFMYRGEVNIKQD-S 102 (187)
Q Consensus 30 ~Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~------e~~~~~i~l~~~~~~~~~~lL~~~Yt~~~~i~~~-~ 102 (187)
.=|++.||| +.|.+-+..|...... ++..+ ....+.+.+ |-++..|+.||+|+-+|++.++.+ .
T Consensus 13 ~~V~LNVGG-----~~F~t~~~TL~~~p~S---~L~~~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnflR~G~l~~p~~~~ 83 (124)
T 1s1g_A 13 ELIVLNVSG-----RRFQTWRTTLERYPDT---LLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYEC 83 (124)
T ss_dssp CEEEEEETT-----EEEEEEHHHHTTSTTS---STTSSGGGGTBCSSSCSEEE-CSCHHHHHHHHHHHHHSCBCCCTTSC
T ss_pred CEEEEEeCC-----EEEEEeHHHHhcCCCc---eecccCCcccccCCCCcEEE-cCChHHHHHHHHHHhcCCCCCCCCcC
Confidence 358899999 9999999999876432 23222 123455666 569999999999999999987543 4
Q ss_pred HHHHHHHHhhcCccchH-hhc
Q psy13247 103 LKQVLETAKVLMVRGLC-EEN 122 (187)
Q Consensus 103 ~~~ll~~A~~~~~~~L~-~~c 122 (187)
+..++.-|.+|+++.+. +.|
T Consensus 84 ~~~l~~Ea~fy~i~~l~l~~c 104 (124)
T 1s1g_A 84 ISAYDDELAFYGILPEIIGDC 104 (124)
T ss_dssp HHHHHHHHHHTTCCGGGBCHH
T ss_pred HHHHHHHHHHcCCChHHHHHH
Confidence 78899999999999884 666
No 33
>2nz0_B Potassium voltage-gated channel subfamily D membe; KV4.3, kchip1, membrane protein; 3.20A {Homo sapiens} PDB: 2i2r_A
Probab=97.39 E-value=0.0002 Score=49.88 Aligned_cols=86 Identities=9% Similarity=0.105 Sum_probs=65.3
Q ss_pred ceeEEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCC------CCCCCeEEeCCCCHHHHHHHhcccccceeccCcc-
Q psy13247 29 LVDVTLACNWENSDIKTYKAHQMILSACSPYFEKLFLEN------THPHPIIFLRDIHHKELEVILHFMYRGEVNIKQD- 101 (187)
Q Consensus 29 ~~Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~------e~~~~~i~l~~~~~~~~~~lL~~~Yt~~~~i~~~- 101 (187)
-.=|++.||| +.|...+..|...... |+... ....+.+.+ |-++..|+.||+|+-+|++.++.+
T Consensus 34 ~~~V~LNVGG-----~~F~T~~~TL~~~P~S---~L~~~~~~~~~~~~~g~yFi-DRdp~~F~~ILnflR~G~l~~p~~~ 104 (140)
T 2nz0_B 34 DELIVLNVSG-----RRFQTWRTTLERYPDT---LLGSTEKEFFFNEDTKEYFF-DRDPEVFRCVLNFYRTGKLHYPRYE 104 (140)
T ss_dssp CCEEEEEETT-----EEEEEEHHHHHTCTTS---TTTSGGGGGSEETTTTEEEE-CSCHHHHHHHHHHHHHSSBCCCTTS
T ss_pred CCEEEEEECC-----EEEEeeHHHHhcCCCe---eecccCCcccccCCCCeEEE-eCCcHHHHHHHHHHhcCCcCCCCCc
Confidence 3468899999 9999999999876432 23222 123456666 579999999999999999987543
Q ss_pred cHHHHHHHHhhcCccch-HhhcC
Q psy13247 102 SLKQVLETAKVLMVRGL-CEENS 123 (187)
Q Consensus 102 ~~~~ll~~A~~~~~~~L-~~~c~ 123 (187)
.+..++.-|++|+++.+ ++.|+
T Consensus 105 ~~~~l~eEa~fy~i~~l~l~~CC 127 (140)
T 2nz0_B 105 CISAYDDELAFYGILPEIIGDCC 127 (140)
T ss_dssp CHHHHHHHHHHHTCCGGGBCTTT
T ss_pred CHHHHHHHHHHcCCChHHHHHHH
Confidence 47889999999999998 45663
No 34
>1t1d_A Protein (potassium channel KV1.1); potassium channels, tetramerization domain, aplysia KV1.1, proton transport, membrane protein; 1.51A {Aplysia californica} SCOP: d.42.1.2 PDB: 1eod_A 1eof_A 1eoe_A 1a68_A 1qdv_A 1exb_E* 1qdw_A 1dsx_A
Probab=97.36 E-value=0.00014 Score=47.67 Aligned_cols=82 Identities=15% Similarity=0.138 Sum_probs=61.9
Q ss_pred EEEEeCCCCCcceEEehhhHHhhccCH-HHHHhhcCC---CCCCCeEEeCCCCHHHHHHHhccccc-ceeccCc-ccHHH
Q psy13247 32 VTLACNWENSDIKTYKAHQMILSACSP-YFEKLFLEN---THPHPIIFLRDIHHKELEVILHFMYR-GEVNIKQ-DSLKQ 105 (187)
Q Consensus 32 v~i~v~~~~~~~~~~~~Hk~vL~~~S~-~F~~~~~~~---e~~~~~i~l~~~~~~~~~~lL~~~Yt-~~~~i~~-~~~~~ 105 (187)
|++.||| +.|...+..|..... .+.+|+... ....+.+.+ |-++..|+.||+|+-+ |++.++. ..+..
T Consensus 3 v~LNVGG-----~~f~t~~~TL~~~p~s~L~~~~~~~~~~~~~~~eyFi-DRdp~~F~~ILnflR~~G~l~~p~~~~~~~ 76 (100)
T 1t1d_A 3 VVINVSG-----LRFETQLKTLNQFPDTLLGNPQKRNRYYDPLRNEYFF-DRNRPSFDAILYFYQSGGRLRRPVNVPLDV 76 (100)
T ss_dssp EEEEETT-----EEEEEEHHHHHTSTTSTTTCHHHHGGGEETTTTEEEE-CSCSTTHHHHHHHHHTTSCCCCCTTSCHHH
T ss_pred EEEEECC-----EEEEeeHHHHhcCCCccccchhccccccCCCceeEEE-cCChHHHHHHHHHHhcCCcccCCCCCCHHH
Confidence 6889999 999999999976633 233444321 123456666 5799999999999998 8987753 34678
Q ss_pred HHHHHhhcCccchH
Q psy13247 106 VLETAKVLMVRGLC 119 (187)
Q Consensus 106 ll~~A~~~~~~~L~ 119 (187)
++.-|.+|+++++.
T Consensus 77 ~~~Ea~fy~i~~~~ 90 (100)
T 1t1d_A 77 FSEEIKFYELGENA 90 (100)
T ss_dssp HHHHHHHTTCCHHH
T ss_pred HHHHHHHcCCCHHH
Confidence 99999999998754
No 35
>3kvt_A Potassium channel protein SHAW; tetramerization domain, molecular recogni zinc-binding; 2.00A {Aplysia californica} SCOP: d.42.1.2
Probab=97.36 E-value=0.00017 Score=48.57 Aligned_cols=86 Identities=12% Similarity=0.046 Sum_probs=66.8
Q ss_pred eEEEEeCCCCCcceEEehhhHHhhccCH-HHHHhhcCC---CCCCCeEEeCCCCHHHHHHHhcccccceeccCcc-cHHH
Q psy13247 31 DVTLACNWENSDIKTYKAHQMILSACSP-YFEKLFLEN---THPHPIIFLRDIHHKELEVILHFMYRGEVNIKQD-SLKQ 105 (187)
Q Consensus 31 Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~-~F~~~~~~~---e~~~~~i~l~~~~~~~~~~lL~~~Yt~~~~i~~~-~~~~ 105 (187)
=|++.||| +.|...+..|..... .+..|+.+. ....+.+.+ |-++..|..||+|+-+|++.++.+ ....
T Consensus 6 ~V~LNVGG-----~~f~T~~~TL~~~P~s~L~~l~~~~~~~~~~~g~~Fi-DRdp~~F~~ILnylR~G~l~~p~~~~~~~ 79 (115)
T 3kvt_A 6 RVIINVGG-----IRHETYKATLKKIPATRLSRLTEGMLNYDPVLNEYFF-DRHPGVFAQIINYYRSGKLHYPTDVCGPL 79 (115)
T ss_dssp EEEEEETT-----EEEEEEHHHHTTSCSSTTTTCCTTSTTEETTTTEEEE-CSCTTTHHHHHHHHHHSCBCCCSSSCHHH
T ss_pred EEEEEECC-----EEEEecHHHHhcCCCccHHHHhcCCCCCCCCCCcEEE-ecChHHHHHHHHHhcCCCCCCCCcccHHH
Confidence 47899999 999999999998754 455666542 123456666 579999999999999999987653 4678
Q ss_pred HHHHHhhcCccchHh-hc
Q psy13247 106 VLETAKVLMVRGLCE-EN 122 (187)
Q Consensus 106 ll~~A~~~~~~~L~~-~c 122 (187)
++.-|.+|++++..- .|
T Consensus 80 ~~~Ea~fy~i~~~~l~~C 97 (115)
T 3kvt_A 80 FEEELEFWGLDSNQVEPC 97 (115)
T ss_dssp HHHHHHHHTCCGGGBCGG
T ss_pred HHHHHHHhCCChHHHHHH
Confidence 999999999998653 45
No 36
>1nn7_A Potassium channel KV4.2; teteramerization domain, voltage gated potassium channel SHAL, membrane protein; 2.10A {Rattus norvegicus} SCOP: d.42.1.2
Probab=97.15 E-value=0.00012 Score=48.60 Aligned_cols=82 Identities=13% Similarity=0.141 Sum_probs=62.3
Q ss_pred EEEEeCCCCCcceEEehhhHHhhccCHHHHHhhcCC------CCCCCeEEeCCCCHHHHHHHhcccccceeccCcc-cHH
Q psy13247 32 VTLACNWENSDIKTYKAHQMILSACSPYFEKLFLEN------THPHPIIFLRDIHHKELEVILHFMYRGEVNIKQD-SLK 104 (187)
Q Consensus 32 v~i~v~~~~~~~~~~~~Hk~vL~~~S~~F~~~~~~~------e~~~~~i~l~~~~~~~~~~lL~~~Yt~~~~i~~~-~~~ 104 (187)
|++.||| +.|...+..|...... |+... ....+.+.+ |-++..|..||+|+-+|++.++.+ .+.
T Consensus 2 V~LNVGG-----~~f~t~~~TL~~~p~s---~L~~~~~~~~~~~~~~~~Fi-DRdp~~F~~ILnflR~g~l~~p~~~~~~ 72 (105)
T 1nn7_A 2 IVLNVSG-----TRFQTWQDTLERYPDT---LLGSSERDFFYHPETQQYFF-DRDPDIFRHILNFYRTGKLHYPRHECIS 72 (105)
T ss_dssp EEEEETT-----EEEEECHHHHHTSCSS---STTSGGGGGGEEGGGTEEEE-CSCTTTHHHHHHHHHHSCBCCCTTSCHH
T ss_pred EEEEECC-----EEEEEeHHHHhcCCCc---cccccCCcccccCCCCcEEE-eCCcHHHHHHHHHHhcCCCCCCCCcCHH
Confidence 6899999 9999999999876432 22221 112345555 569999999999999999887543 478
Q ss_pred HHHHHHhhcCccchH-hhc
Q psy13247 105 QVLETAKVLMVRGLC-EEN 122 (187)
Q Consensus 105 ~ll~~A~~~~~~~L~-~~c 122 (187)
.++.-|.+|+++.+. +.|
T Consensus 73 ~l~~Ea~fy~i~~l~~~~c 91 (105)
T 1nn7_A 73 AYDEELAFFGLIPEIIGDC 91 (105)
T ss_dssp HHHHHHHHHTCCSCCBCHH
T ss_pred HHHHHHHHcCCCHHHHHHH
Confidence 899999999999874 556
No 37
>2r9r_B Paddle chimera voltage gated potassium channel KV; voltage sensor, voltage dependent, ION CH shaker, membrane protein, eukaryotic; HET: NAP PGW; 2.40A {Rattus norvegicus} PDB: 3lnm_B* 3lut_B* 2a79_B*
Probab=93.81 E-value=0.056 Score=45.43 Aligned_cols=83 Identities=11% Similarity=0.107 Sum_probs=61.2
Q ss_pred eEEEEeCCCCCcceEEehhhHHhhccCHHH-HHhhcCC---CCCCCeEEeCCCCHHHHHHHhccccc-ceeccCcc-cHH
Q psy13247 31 DVTLACNWENSDIKTYKAHQMILSACSPYF-EKLFLEN---THPHPIIFLRDIHHKELEVILHFMYR-GEVNIKQD-SLK 104 (187)
Q Consensus 31 Dv~i~v~~~~~~~~~~~~Hk~vL~~~S~~F-~~~~~~~---e~~~~~i~l~~~~~~~~~~lL~~~Yt-~~~~i~~~-~~~ 104 (187)
=|++.||| +.|...+..|.....-+ ..++... ....++..+ |-++..|+.+|.|+.+ |++..+.+ ...
T Consensus 53 ~v~lNVgG-----~~f~t~~~tL~~~p~s~l~~~~~~~~~~~~~~~~~f~-DR~~~~F~~IL~~~r~~g~l~~p~~~~~~ 126 (514)
T 2r9r_B 53 RVVINISG-----LRFETQLKTLAQFPETLLGDPKKRMRYFDPLRNEYFF-DRNRPSFDAILYYYQSGGRLRRPVNVPLD 126 (514)
T ss_dssp EEEEEETT-----EEEEEEHHHHTTSTTSTTTCHHHHGGGEETTTTEEEE-CSCHHHHHHHHHHHHHTSCCCCCTTSCHH
T ss_pred EEEEEeCC-----EEEEecHHHHhcCCCCcccccccCCcccCCCCCCEEE-cCChHHHHHHHHHHhcCCccccCCcccHH
Confidence 57888999 99999999997654322 1122111 223456666 6799999999999999 99887544 456
Q ss_pred HHHHHHhhcCccchH
Q psy13247 105 QVLETAKVLMVRGLC 119 (187)
Q Consensus 105 ~ll~~A~~~~~~~L~ 119 (187)
.+.+-|.+|+++++.
T Consensus 127 ~~~~E~~f~~i~~~~ 141 (514)
T 2r9r_B 127 IFSEEIRFYELGEEA 141 (514)
T ss_dssp HHHHHHHHTTCCHHH
T ss_pred HHHHHHHhcCCCHHH
Confidence 689999999999765
No 38
>3htm_A Speckle-type POZ protein; BTB, SPOP, ubiquitin, ligase, nucleus, UBL conjugation pathway, protein binding; 2.50A {Homo sapiens}
Probab=49.63 E-value=9.5 Score=26.18 Aligned_cols=28 Identities=14% Similarity=0.157 Sum_probs=25.2
Q ss_pred ccCcccHHHHHHHHhhcCccchHhhcCC
Q psy13247 97 NIKQDSLKQVLETAKVLMVRGLCEENSP 124 (187)
Q Consensus 97 ~i~~~~~~~ll~~A~~~~~~~L~~~c~~ 124 (187)
.++.+++..++..|..|+++.|.+.|.+
T Consensus 131 ~l~~~n~~~~~~~A~~~~~~~L~~~~~~ 158 (172)
T 3htm_A 131 NLSVENAAEILILADLHSADQLKTQAVD 158 (172)
T ss_dssp TCCTTTHHHHHHHHHHTTCHHHHHHHHH
T ss_pred hCCHHHHHHHHHHHHHhCcHHHHHHHHH
Confidence 3678899999999999999999999954
No 39
>3hqi_A Speckle-type POZ protein; SPOP, ubiquitin, puckered, nucleus, UBL conjugation pathway, protein binding, ligase; 2.62A {Homo sapiens} PDB: 3hu6_A
Probab=37.05 E-value=18 Score=27.58 Aligned_cols=27 Identities=11% Similarity=0.116 Sum_probs=24.6
Q ss_pred cCcccHHHHHHHHhhcCccchHhhcCC
Q psy13247 98 IKQDSLKQVLETAKVLMVRGLCEENSP 124 (187)
Q Consensus 98 i~~~~~~~ll~~A~~~~~~~L~~~c~~ 124 (187)
++.+++..++.+|..|+++.|++.|..
T Consensus 272 ~~~~n~~~~l~~A~~~~~~~L~~~~~~ 298 (312)
T 3hqi_A 272 LSVENAAEILILADLHSADQLKTQAVD 298 (312)
T ss_dssp CCTTTHHHHHHHHHHTTCHHHHHHHHH
T ss_pred CCHHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 577899999999999999999999954
No 40
>3hve_A Gigaxonin; ubiquitin, cytoplasm, cytoskeleton, disease mutation, kelch repeat, neurodegeneration, phosphoprotein, polymorphism, UBL conjugation; 2.80A {Homo sapiens} PDB: 3hve_B
Probab=26.54 E-value=29 Score=25.60 Aligned_cols=29 Identities=7% Similarity=-0.058 Sum_probs=25.4
Q ss_pred ccCcccHHHHHHHHhhcCccchHhhcCCC
Q psy13247 97 NIKQDSLKQVLETAKVLMVRGLCEENSPN 125 (187)
Q Consensus 97 ~i~~~~~~~ll~~A~~~~~~~L~~~c~~~ 125 (187)
.++.+|+..++..|..|+++.|.+.|..+
T Consensus 130 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~ 158 (256)
T 3hve_A 130 CIAAENCIGIRDFALHYCLHHVHYLATEY 158 (256)
T ss_dssp TCCSSTTHHHHHHHHHTTCHHHHHHHHHH
T ss_pred hCCHhhHHHHHHHHHHcCcHHHHHHHHHH
Confidence 35778999999999999999999999554
No 41
>3i3n_A Kelch-like protein 11; structural genomics, BTB, KLHL11A, SGC, structural genomics consortium, kelch repeat, secreted, protein binding; 2.60A {Homo sapiens} PDB: 4ap2_A* 4apf_A
Probab=26.01 E-value=35 Score=25.51 Aligned_cols=29 Identities=7% Similarity=0.072 Sum_probs=25.7
Q ss_pred ccCcccHHHHHHHHhhcCccchHhhcCCC
Q psy13247 97 NIKQDSLKQVLETAKVLMVRGLCEENSPN 125 (187)
Q Consensus 97 ~i~~~~~~~ll~~A~~~~~~~L~~~c~~~ 125 (187)
.++.+|+..++..|..|+++.|.+.|..+
T Consensus 138 ~l~~~n~~~i~~~A~~~~~~~L~~~~~~~ 166 (279)
T 3i3n_A 138 KLHLSNCVAIHSLAHMYTLSQLALKAADM 166 (279)
T ss_dssp HCCTTTHHHHHHHHHHTTCHHHHHHHHHH
T ss_pred cCCcchHHHHHHHHHHcCcHHHHHHHHHH
Confidence 46788999999999999999999999554
No 42
>1o6d_A Hypothetical UPF0247 protein TM0844; structural genomics, unknown function; 1.66A {Thermotoga maritima} SCOP: c.116.1.3
Probab=23.09 E-value=70 Score=22.31 Aligned_cols=23 Identities=17% Similarity=0.241 Sum_probs=19.3
Q ss_pred hHHHHHHHHHHhCCCceeEEEEeCC
Q psy13247 14 SNLTDVLSKFLQDESLVDVTLACNW 38 (187)
Q Consensus 14 ~~l~~~l~~~~~~~~~~Dv~i~v~~ 38 (187)
..+.+.|.+...+| +|++|.+||
T Consensus 81 ~~fA~~l~~~~~~G--~~i~FvIGG 103 (163)
T 1o6d_A 81 EEFADFLKDLEMKG--KDITILIGG 103 (163)
T ss_dssp HHHHHHHHHHHHHT--CCEEEEECC
T ss_pred HHHHHHHHHHHhcC--CeEEEEEEC
Confidence 46778888888888 699999998
No 43
>1ns5_A Hypothetical protein YBEA; structural genomics, PSI, protein structure initiative, northeast structural genomics consortium, NESG; 1.68A {Escherichia coli} SCOP: c.116.1.3
Probab=21.86 E-value=68 Score=22.14 Aligned_cols=23 Identities=26% Similarity=0.290 Sum_probs=19.2
Q ss_pred hHHHHHHHHHHhCCCceeEEEEeCC
Q psy13247 14 SNLTDVLSKFLQDESLVDVTLACNW 38 (187)
Q Consensus 14 ~~l~~~l~~~~~~~~~~Dv~i~v~~ 38 (187)
..+.+.+.+...+| +|++|.+||
T Consensus 82 ~~fA~~l~~~~~~g--~~i~FvIGG 104 (155)
T 1ns5_A 82 PQLAAELERWKLDG--RDVSLLIGG 104 (155)
T ss_dssp HHHHHHHHHHHHHC--SCEEEEECB
T ss_pred HHHHHHHHHHHhcC--CeEEEEEEC
Confidence 46777888888888 699999998
Done!