Query psy13251
Match_columns 166
No_of_seqs 106 out of 119
Neff 4.1
Searched_HMMs 29240
Date Fri Aug 16 23:59:59 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13251.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13251hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3e07_A Protein spaetzle; cysti 100.0 3.7E-41 1.3E-45 257.2 6.1 95 66-165 3-100 (114)
2 4ec7_A VNGF, venom nerve growt 99.5 7.9E-14 2.7E-18 106.4 8.4 93 69-165 9-107 (116)
3 1b8k_A NT3, protein (neurotrop 98.2 7.2E-06 2.5E-10 63.0 9.1 94 69-165 9-109 (119)
4 1bnd_A BDNF, brain derived neu 98.2 9.9E-06 3.4E-10 62.2 8.8 94 69-165 8-110 (119)
5 1www_V Beta-NGF, protein (nerv 98.1 1.1E-05 3.6E-10 62.1 8.4 93 69-165 10-109 (120)
6 1hcf_A Neurotrophin-4; transfe 98.0 3E-05 1E-09 60.3 9.1 94 69-165 12-120 (130)
7 3ij2_A Beta-NGF, beta-nerve gr 97.7 0.00011 3.9E-09 61.7 8.1 105 57-165 97-212 (230)
8 1aoc_A Coagulogen; coagulation 97.4 0.00055 1.9E-08 54.4 8.3 79 71-159 85-165 (175)
9 1jpy_A Interleukin 17F, IL-17F 75.7 11 0.00038 29.1 7.4 70 92-164 55-126 (137)
10 2vxs_A Interleukin-17A; epitop 60.7 11 0.00039 29.1 4.6 70 92-164 55-126 (137)
11 1as5_A Conotoxin Y-PIIIE; neur 40.7 10 0.00035 21.6 1.1 21 115-138 5-25 (26)
12 1jlp_A PSI-conotoxin PIIIF; mu 23.7 35 0.0012 19.3 1.4 20 115-137 5-24 (26)
No 1
>3e07_A Protein spaetzle; cystine knot, TOLL ligand, antimicrobial, cytokine, developm protein, fungicide, glycoprotein, secreted; 2.40A {Drosophila melanogaster}
Probab=100.00 E-value=3.7e-41 Score=257.18 Aligned_cols=95 Identities=29% Similarity=0.676 Sum_probs=75.3
Q ss_pred CCCccccCCcceeeeeeceeeeeCCCcEEEEEeccCCCCceeeeEEEEeecC--CccCCccCCCCCCcCeeEEeeeceEE
Q psy13251 66 SSTSTFTLCPTRSQFVMPQAAVNNKGNWMYVVNINEVDNRYKQLVKSEVCLS--TECNGVCGLPPGYTSRCEQKYVQKRL 143 (166)
Q Consensus 66 ~~d~~~~LC~S~~~~i~Pk~A~N~~g~Wr~IVNt~e~~n~y~Q~VRvE~C~~--~~C~~~~~lp~gY~S~CkQKYv~rrL 143 (166)
++| +++||+|++++|+|++|+|++|+|++|||++ +|+|+||+|+|++ .+|+++++||.||+|+|+|||++|||
T Consensus 3 ~~d-e~~lC~S~~~~i~P~~A~n~~g~W~~IVN~~----~y~Q~vriE~C~~~g~~C~~~~~~p~~Y~s~C~QkY~~~rL 77 (114)
T 3e07_A 3 GSD-ERFLCRSIRKLVYPKKGLRADDTWQLIVNND----EYKQAIQIEECEGADQPCDFAANFPQSYNPICKQHYTQQTL 77 (114)
T ss_dssp --C-CEESSCEEEEEECCCC--------------C----CCEEEEEEEEESSTTSBCTTGGGSCTTSEEEEEEEEEECEE
T ss_pred CCC-ccccCCCEeEEEcchhhccCCCCEEEEEeCC----CcEEEEEEEEeCCCCCccccccccCCCCCCeEeEEecEEEE
Confidence 344 8999999999999999999999999999998 7999999999998 49999999999999999999999999
Q ss_pred EEEeCCCC-cEEEEEEecCCCcC
Q psy13251 144 IALQGEGN-QLYTDVFWIPSCCM 165 (166)
Q Consensus 144 lAld~~g~-~l~~D~Fk~PScC~ 165 (166)
||+|++|+ ++++|+|||||||+
T Consensus 78 la~d~~~~~~~~~d~Fk~PScC~ 100 (114)
T 3e07_A 78 ASIKSDGELDVVQNSFKIPSCCK 100 (114)
T ss_dssp EEECTTSCEEEECCSCEEEEEEE
T ss_pred EEECCCCceeeEEEEEcCCcceE
Confidence 99999976 69999999999996
No 2
>4ec7_A VNGF, venom nerve growth factor; cobra NGF, unknown lipid, hormone; HET: L44; 2.60A {Naja atra}
Probab=99.49 E-value=7.9e-14 Score=106.41 Aligned_cols=93 Identities=24% Similarity=0.444 Sum_probs=81.3
Q ss_pred ccccCCcceeeeeeceeeeeCCCcEEEEEeccCCCC-ceeeeEEEEeecCC-----ccCCccCCCCCCcCeeEEeeeceE
Q psy13251 69 STFTLCPTRSQFVMPQAAVNNKGNWMYVVNINEVDN-RYKQLVKSEVCLST-----ECNGVCGLPPGYTSRCEQKYVQKR 142 (166)
Q Consensus 69 ~~~~LC~S~~~~i~Pk~A~N~~g~Wr~IVNt~e~~n-~y~Q~VRvE~C~~~-----~C~~~~~lp~gY~S~CkQKYv~rr 142 (166)
||..+|+|...++.|..|.|.+|+|..|++....+| .|+|.+..++|... .|.+++. ..|.|+|+||+.|.|
T Consensus 9 ge~sVCdS~s~WV~~~~A~di~G~~V~vl~~v~~~~~~~kQyF~et~C~~~~~~~~~Crgid~--~~w~S~C~~k~s~vr 86 (116)
T 4ec7_A 9 GEHSVCDSVSAWVTKTTATDIKGNTVTVMENVNLDNKVYKEYFFETKCKNPNPEPSGCRGIDS--SHWNSYCTETDTFIK 86 (116)
T ss_dssp CCEESSCEEEEEECCSEEEBTTSCEEEECSEEEETTEEEECCEEEEEESCSCSBTTBSTTBCT--TTEEEEEEEEEEEEE
T ss_pred ccCcccCCcEEEEccCccEecCCCEEEEEEEEecCCceEEEEEEEEEeCCCCCCCCCCcceeC--CcccCEEEeeEeEEE
Confidence 478999999999999999999999999988775533 79999999999852 6998775 468999999999999
Q ss_pred EEEEeCCCCcEEEEEEecCCCcC
Q psy13251 143 LIALQGEGNQLYTDVFWIPSCCM 165 (166)
Q Consensus 143 LlAld~~g~~l~~D~Fk~PScC~ 165 (166)
+|+.|. +...-++++||++|+
T Consensus 87 Alt~~~--~~~~w~~IrI~tsCv 107 (116)
T 4ec7_A 87 ALTMEG--NQASWRFIRIETACV 107 (116)
T ss_dssp EEEEET--TEEEEEEEEEEEEEE
T ss_pred EEEEeC--CcccceEEEeCCceE
Confidence 999995 357788999999996
No 3
>1b8k_A NT3, protein (neurotrophin-3); complex (growth factor/growth factor), hormone/growth factor complex; 2.15A {Homo sapiens} SCOP: g.17.1.3 PDB: 1nt3_A 3buk_A* 1bnd_B
Probab=98.21 E-value=7.2e-06 Score=62.95 Aligned_cols=94 Identities=18% Similarity=0.369 Sum_probs=75.4
Q ss_pred ccccCCcceeeeeece-eeeeCCCcEEEEEeccCCCC-ceeeeEEEEeecCC-----ccCCccCCCCCCcCeeEEeeece
Q psy13251 69 STFTLCPTRSQFVMPQ-AAVNNKGNWMYVVNINEVDN-RYKQLVKSEVCLST-----ECNGVCGLPPGYTSRCEQKYVQK 141 (166)
Q Consensus 69 ~~~~LC~S~~~~i~Pk-~A~N~~g~Wr~IVNt~e~~n-~y~Q~VRvE~C~~~-----~C~~~~~lp~gY~S~CkQKYv~r 141 (166)
||-..|+|....|.=+ .|.+..|+-..|+......| .|+|-+-..+|.++ .|.+++. ..+.|.|+|+..+-
T Consensus 9 Ge~sVCdS~s~WV~~kt~a~Di~G~~VtVl~~v~~~~~~~kQyF~ET~C~~~~~~~~gCrGID~--rhwnS~C~tt~SyV 86 (119)
T 1b8k_A 9 GEYSVCDSESLWVTDKSSAIDIRGHQVTVLGEIKTGNSPVKQYFYETRCKEARPVKNGCRGIDD--KHWNSQCKTSQTYV 86 (119)
T ss_dssp --CCSSCEEEEEECCCCEEEBTTSCEEEECSBC------CBCCEEEEEECC------CCTTCCC--SSCCCEEEEEEEEE
T ss_pred CccccccCeeEeEccCCEEEecCCCEEEEEEEEEcCCCceEEEEEEEEeCCCCCCCCCccCEec--ccccCeeeCcEEEE
Confidence 3788999999999965 89999999999977664423 79999999999973 7998885 47899999999999
Q ss_pred EEEEEeCCCCcEEEEEEecCCCcC
Q psy13251 142 RLIALQGEGNQLYTDVFWIPSCCM 165 (166)
Q Consensus 142 rLlAld~~g~~l~~D~Fk~PScC~ 165 (166)
|.|..|.++ ...-.+.+|.++|+
T Consensus 87 rALt~~~~~-~~~Wr~IRI~tsCv 109 (119)
T 1b8k_A 87 RALTSENNK-LVGWRWIRIDTSCV 109 (119)
T ss_dssp EEEEESSSS-CCEEEEEEEEEEEE
T ss_pred EEEEEcCCC-eeeEEEEEeCcceE
Confidence 999998653 36667889999995
No 4
>1bnd_A BDNF, brain derived neurotrophic factor; complex (growth factor-growth factor) complex; 2.30A {Homo sapiens} SCOP: g.17.1.3 PDB: 1b8m_A
Probab=98.15 E-value=9.9e-06 Score=62.21 Aligned_cols=94 Identities=19% Similarity=0.383 Sum_probs=79.1
Q ss_pred ccccCCcceeeeee---ceeeeeCCCcEEEEEeccCC-CCceeeeEEEEeecCC-----ccCCccCCCCCCcCeeEEeee
Q psy13251 69 STFTLCPTRSQFVM---PQAAVNNKGNWMYVVNINEV-DNRYKQLVKSEVCLST-----ECNGVCGLPPGYTSRCEQKYV 139 (166)
Q Consensus 69 ~~~~LC~S~~~~i~---Pk~A~N~~g~Wr~IVNt~e~-~n~y~Q~VRvE~C~~~-----~C~~~~~lp~gY~S~CkQKYv 139 (166)
||-..|+|....|. =..|.+..|+-..|+..... .+.|+|-+-..+|.++ .|.+++. ..+.|.|+++..
T Consensus 8 ge~sVCdS~s~WV~~~~kttA~Di~G~~VtVl~~v~~~n~~~kQyF~ET~C~~~~~~~~gCrGID~--rhwnS~C~ttqS 85 (119)
T 1bnd_A 8 GQLSVCDSISEWVTAADKKTAVDMSGGTVTVLEKVPVSKGQLKQYFYETKCNPMGYTKEGCRGIDK--RHWNSQCRTTQS 85 (119)
T ss_dssp CCEESSCEEEEEEEHHHHCEEEBTTSCEEEECSEEECSSSEEECEEEEEEECTTSGGGSSCTTBCT--TTEEEEEEEEEE
T ss_pred cccccccCeeeeeecCCcCEEEecCCCEEEEEEEEecCCCceEEEEEEEEeCCCCCCCCCccCEec--ccccceecCcee
Confidence 47899999999997 47999999999988643322 1279999999999974 6999886 478999999999
Q ss_pred ceEEEEEeCCCCcEEEEEEecCCCcC
Q psy13251 140 QKRLIALQGEGNQLYTDVFWIPSCCM 165 (166)
Q Consensus 140 ~rrLlAld~~g~~l~~D~Fk~PScC~ 165 (166)
|-|.|..|..+ .+.-++.+|.++|+
T Consensus 86 yVrALt~~~~~-~v~Wr~IRI~tsCv 110 (119)
T 1bnd_A 86 YVRALTMDSKK-RIGWRFIRIDTSCV 110 (119)
T ss_dssp EEEEEEECTTC-CEEEEEEEEEEEEE
T ss_pred eeeeeeecCCc-eeeEEEEEECCceE
Confidence 99999998764 57888999999996
No 5
>1www_V Beta-NGF, protein (nerve growth factor); complex, cysteine knot, immunoglobulin like domain; 2.20A {Homo sapiens} SCOP: g.17.1.3 PDB: 1sg1_A 2ifg_E* 1sgf_B* 1btg_A 1bet_A
Probab=98.13 E-value=1.1e-05 Score=62.10 Aligned_cols=93 Identities=20% Similarity=0.405 Sum_probs=78.2
Q ss_pred ccccCCcceeeee-eceeeeeCCCcEEEEEeccCC-CCceeeeEEEEeecCC-----ccCCccCCCCCCcCeeEEeeece
Q psy13251 69 STFTLCPTRSQFV-MPQAAVNNKGNWMYVVNINEV-DNRYKQLVKSEVCLST-----ECNGVCGLPPGYTSRCEQKYVQK 141 (166)
Q Consensus 69 ~~~~LC~S~~~~i-~Pk~A~N~~g~Wr~IVNt~e~-~n~y~Q~VRvE~C~~~-----~C~~~~~lp~gY~S~CkQKYv~r 141 (166)
|+-..|+|....| -...|.+..|+-..|+..... .+.|+|-+..-+|.+. .|.+++. ..+.|.|+++-.+-
T Consensus 10 ge~sVCdS~s~WV~nkttA~Di~G~~VtVl~~v~~n~~~~kQyF~ET~C~~~~~~~~gCrGiD~--rhwnS~C~tt~t~V 87 (120)
T 1www_V 10 GEFSVCDSVSVWVGDKTTATDIKGKEVMVLGEVNINNSVFKQYFFETKCRDPNPVDSGCRGIDS--KHWNSYCTTTHTFV 87 (120)
T ss_dssp SCEESSCEEEEEECCCCEEEBTTSCEEEECSEEESSSSEEECCEEEEEECC------CCTTBCT--TTEEEEEEEEEEEE
T ss_pred cccccccCeeeEEcCCCEEEccCCCEEEEEEEEecCCceEEEEEEEEEeCCCCCCCCCccceec--cccccEecccEEEE
Confidence 3678999999999 589999999998888665433 2389999999999962 7998875 47899999999999
Q ss_pred EEEEEeCCCCcEEEEEEecCCCcC
Q psy13251 142 RLIALQGEGNQLYTDVFWIPSCCM 165 (166)
Q Consensus 142 rLlAld~~g~~l~~D~Fk~PScC~ 165 (166)
|+|..|.+ .+--++.+|.++|+
T Consensus 88 rAlt~~~~--~~~Wr~IrI~tsCv 109 (120)
T 1www_V 88 KALTMDGK--QAAWRFIRIDTACV 109 (120)
T ss_dssp EEEEECSS--SEEEEEEEEEEEEE
T ss_pred EEEEEeCC--ceeeEEEEECCeeE
Confidence 99999863 57788999999995
No 6
>1hcf_A Neurotrophin-4; transferase/hormone, complex(transferase/growth factor), neurotrophin-4/5, TRKB receptor, NGF-beta superfamily; 2.7A {Homo sapiens} SCOP: g.17.1.3 PDB: 1b98_A 1b8m_B
Probab=98.01 E-value=3e-05 Score=60.34 Aligned_cols=94 Identities=20% Similarity=0.358 Sum_probs=80.1
Q ss_pred ccccCCcceeeeee-ceeeeeCCCcEEEEEecc-CC-CCceeeeEEEEeecCC------------ccCCccCCCCCCcCe
Q psy13251 69 STFTLCPTRSQFVM-PQAAVNNKGNWMYVVNIN-EV-DNRYKQLVKSEVCLST------------ECNGVCGLPPGYTSR 133 (166)
Q Consensus 69 ~~~~LC~S~~~~i~-Pk~A~N~~g~Wr~IVNt~-e~-~n~y~Q~VRvE~C~~~------------~C~~~~~lp~gY~S~ 133 (166)
||...|+|....|. =..|.+..|+-..|+... .. .+.|+|-+-..+|.+. .|.+++. ..+.|.
T Consensus 12 ge~sVCdS~s~WV~nkttA~Di~G~~VtVL~~v~~~nn~~~kQyF~ET~Cr~~~~~~g~~~~~~sgCrGID~--rhwnS~ 89 (130)
T 1hcf_A 12 GELAVCDAVSGWVTDRRTAVDLRGREVEVLGEVPAAGGSPLRQYFFETRCKADNAEEGGPGAGGGGCRGVDR--RHWVSE 89 (130)
T ss_dssp CCEESSCEEEEEECCCCEEEBTTSCEEEECSEEECSSSSEEECCEEEEEECCC------CCSBSSCCTTBCT--TTEEEE
T ss_pred CcccccccEeEEeccccEEEecCCCEEEEeeeeecCCCcceEEEEEEEEecCCcccccCCCcCCCCccCccc--ccccce
Confidence 47899999999998 889999999999997766 43 2389999999999881 6998885 578999
Q ss_pred eEEeeeceEEEEEeCCCCcEEEEEEecCCCcC
Q psy13251 134 CEQKYVQKRLIALQGEGNQLYTDVFWIPSCCM 165 (166)
Q Consensus 134 CkQKYv~rrLlAld~~g~~l~~D~Fk~PScC~ 165 (166)
|+++..|-|.|..|..+ ..--.+.+|.++|+
T Consensus 90 C~tt~SyVrALt~~~~~-~~~Wr~IRI~taCv 120 (130)
T 1hcf_A 90 CKAKQSYVRALTADAQG-RVGWRWIRIDTACV 120 (130)
T ss_dssp EEEEEEEEEEEEECSSC-CEEEEEEEEEEEEE
T ss_pred eeccEEEEEEEEEcCCC-cceEEEEEeCCccE
Confidence 99999999999998754 57778899999995
No 7
>3ij2_A Beta-NGF, beta-nerve growth factor; receptor and ligand, cleavage on PAIR of basic residues; 3.75A {Mus musculus}
Probab=97.69 E-value=0.00011 Score=61.66 Aligned_cols=105 Identities=18% Similarity=0.338 Sum_probs=79.6
Q ss_pred cccccccc-C---CCCccccCCcceeeeee-ceeeeeCCCcEEEEEeccCCCC-ceeeeEEEEeecCC-----ccCCccC
Q psy13251 57 NADREKRQ-S---SSTSTFTLCPTRSQFVM-PQAAVNNKGNWMYVVNINEVDN-RYKQLVKSEVCLST-----ECNGVCG 125 (166)
Q Consensus 57 ~~~~~kR~-~---~~d~~~~LC~S~~~~i~-Pk~A~N~~g~Wr~IVNt~e~~n-~y~Q~VRvE~C~~~-----~C~~~~~ 125 (166)
...|.||. . ...||-..|+|....|. -..|.+..|+-..|+......| .|+|-+-..+|.+. .|.+++.
T Consensus 97 rt~R~KR~a~~~~~~RGE~SVCDS~S~WV~nKttA~Di~G~~VtVL~ev~~n~~~~kQyFyETkC~~~~~~~~gCrGID~ 176 (230)
T 3ij2_A 97 RTHRSAASSTHPVFHMGEFSVCDSVSVWVGDKTTATDIKGKEVTVLAEVNINNSVFRQYFFETKCRASNPVESGCRGIDS 176 (230)
T ss_dssp --------------CCSCEESSCEEEEECCCCCEEEBTTSCEEEECCCCCTTSCCCCCCCEEEEESCSCSBTTBSTTBCT
T ss_pred ccccceecccCCcccccccccccceeeeeccCCeeeecCCCEEEEEEEEecCCcceeEEEEEEecCCCCCCCCCccCeec
Confidence 44566777 2 23568999999999998 5589999999999988775523 89999999999873 5998885
Q ss_pred CCCCCcCeeEEeeeceEEEEEeCCCCcEEEEEEecCCCcC
Q psy13251 126 LPPGYTSRCEQKYVQKRLIALQGEGNQLYTDVFWIPSCCM 165 (166)
Q Consensus 126 lp~gY~S~CkQKYv~rrLlAld~~g~~l~~D~Fk~PScC~ 165 (166)
..+.|.|+++..|=|.|+.|.+ ..--.+.+|=++|+
T Consensus 177 --rhWnS~CkttqSfVrALT~d~~--~~~Wr~IRIdTsCv 212 (230)
T 3ij2_A 177 --KHWNSYCTTTHTFVKALTTDEK--QAAWRFIRIDTACV 212 (230)
T ss_dssp --TTEEEEEEEEEEEEEEEEEBTT--BCCEEEEEEEEEEE
T ss_pred --ccccccccCceeEEEEEEEcCC--cceeEEEEeCceeE
Confidence 4789999999999999999853 45567788888885
No 8
>1aoc_A Coagulogen; coagulation factor, clottable protein, cystine knot superfamily; 2.00A {Tachypleus tridentatus} SCOP: g.17.1.5
Probab=97.43 E-value=0.00055 Score=54.36 Aligned_cols=79 Identities=23% Similarity=0.426 Sum_probs=70.5
Q ss_pred ccCCcceeeeeeceeeeeCCCcEEEEEeccCCCCceeeeEEEEeecCC--ccCCccCCCCCCcCeeEEeeeceEEEEEeC
Q psy13251 71 FTLCPTRSQFVMPQAAVNNKGNWMYVVNINEVDNRYKQLVKSEVCLST--ECNGVCGLPPGYTSRCEQKYVQKRLIALQG 148 (166)
Q Consensus 71 ~~LC~S~~~~i~Pk~A~N~~g~Wr~IVNt~e~~n~y~Q~VRvE~C~~~--~C~~~~~lp~gY~S~CkQKYv~rrLlAld~ 148 (166)
..-||..++---|..+.++.|+.|+|||.+.- .|.|-|-.-+|... .| ||+.+|.|+=+.-||+++|-
T Consensus 85 ~secpvstrdcepvfgyt~a~efrvivqapra--gfrqcvwqhkcrygsn~c--------~~~grctqqrsvvrlvtynl 154 (175)
T 1aoc_A 85 KSECPVSTRDCEPVFGYTVAGEFRVIVQAPRA--GFRQCVWQHKCRFGSNSC--------GYNGRCTQQRSVVRLVTYNL 154 (175)
T ss_dssp SSBCCEEEECCCCSEEEBTTCCEEEECCBTTT--TBCBCCCEEEETTSSCBC--------SSSCEECCEEEEEEEEEEET
T ss_pred cccCCcccccccccccceecceEEEEEeCchh--hhHHHHHhhhcccccccc--------CcCceeccceeEEEEEEEec
Confidence 35699999999999999999999999999965 79999999999864 44 67889999999999999999
Q ss_pred CCCcEEEEEEe
Q psy13251 149 EGNQLYTDVFW 159 (166)
Q Consensus 149 ~g~~l~~D~Fk 159 (166)
..+++.-+.|+
T Consensus 155 ek~~flce~~r 165 (175)
T 1aoc_A 155 EKDGFLCESFR 165 (175)
T ss_dssp TTTEEEEEEEE
T ss_pred ccCcEeehhhh
Confidence 98888888887
No 9
>1jpy_A Interleukin 17F, IL-17F; cystine-knot, cytokine, T-cell derived, dimer, immune system; HET: NDG NAG; 2.85A {Homo sapiens} SCOP: g.17.1.6 PDB: 3jvf_A*
Probab=75.75 E-value=11 Score=29.10 Aligned_cols=70 Identities=16% Similarity=0.298 Sum_probs=49.6
Q ss_pred cEEEEEeccCCCCceeeeEEEEeecCCccCCccCCCCCCcCeeEEeeeceEEEEEeCCC--CcEEEEEEecCCCc
Q psy13251 92 NWMYVVNINEVDNRYKQLVKSEVCLSTECNGVCGLPPGYTSRCEQKYVQKRLIALQGEG--NQLYTDVFWIPSCC 164 (166)
Q Consensus 92 ~Wr~IVNt~e~~n~y~Q~VRvE~C~~~~C~~~~~lp~gY~S~CkQKYv~rrLlAld~~g--~~l~~D~Fk~PScC 164 (166)
-|.|++|.+.+ .|.|.|-.-.|+...|....+ -..+.-.|+--|.....|--.+.+ ..+..+...+|=.|
T Consensus 55 PW~Y~~~~Dpn--R~P~~I~eA~Clc~gCi~~~G-~ed~~~~SvPI~~~i~VLRR~~~~~~~~y~~e~~~V~VGC 126 (137)
T 1jpy_A 55 PWNYTVTWDPN--RYPSEVVQAQCRNLGCINAQG-KEDISMNSVPIQQETLVVRRKHQGCSVSFQLEKVLVTVGC 126 (137)
T ss_dssp CEEEEEEECTT--EESSEEEEEEESCSSEECSSS-CEETTSEEEEEEEEEEEEEEESSGGGCEEEEEEEEEEEEE
T ss_pred CcEeEeCCCCC--cCCCccceeEecCCCCCCCCC-ccccceEeeEEEEEEEEEEEcCCCCCceEEEEEEEeCeEe
Confidence 59999999975 999999999999988975322 344566787666655555556543 22556666677666
No 10
>2vxs_A Interleukin-17A; epitope, complex, antibody, secreted, cytokine, glycoprotein interleukin-17; 2.63A {Homo sapiens}
Probab=60.74 E-value=11 Score=29.07 Aligned_cols=70 Identities=14% Similarity=0.238 Sum_probs=43.3
Q ss_pred cEEEEEeccCCCCceeeeEEEEeecCCccCCccCCCCCCcCeeEEeeeceEEEEEeCCC--CcEEEEEEecCCCc
Q psy13251 92 NWMYVVNINEVDNRYKQLVKSEVCLSTECNGVCGLPPGYTSRCEQKYVQKRLIALQGEG--NQLYTDVFWIPSCC 164 (166)
Q Consensus 92 ~Wr~IVNt~e~~n~y~Q~VRvE~C~~~~C~~~~~lp~gY~S~CkQKYv~rrLlAld~~g--~~l~~D~Fk~PScC 164 (166)
-|.|++|.+.+ .|.|.|-.-.|+...|....+ ...+.-.|+.-|.....|--.+.+ .....+...+|=.|
T Consensus 55 PW~Y~~~~Dpn--R~P~~I~eA~Clc~GCi~~~G-~ed~~~~SvPI~~~i~VLRR~~~~c~~sy~lE~~~V~VGC 126 (137)
T 2vxs_A 55 PWNLHRNEDPE--RYPSVIWEAKCRHLGCINADG-NVDYHMNSVPIQQEILVLRREPPHCPNSFRLEKILVSVGC 126 (137)
T ss_dssp CEEEEEEECSS--CTTSEEEEEEESCSSEECTTS-CEETTSEEEEEEEEEEEC---------CCCCEEEEEEEEE
T ss_pred CcEEEeCCCCC--cCCCccCEEEecCCCCCCCCC-cccCceEEEeEEEEEEEEEeccCCCCceEEEEEEeeCEEe
Confidence 59999999975 999999999999988975322 334556677665544444434322 12334555566555
No 11
>1as5_A Conotoxin Y-PIIIE; neurotoxin, acetylcholine; HET: HYP; NMR {Conus purpurascens} SCOP: j.30.1.4 PDB: 1jlo_A*
Probab=40.68 E-value=10 Score=21.60 Aligned_cols=21 Identities=29% Similarity=0.683 Sum_probs=16.4
Q ss_pred ecCCccCCccCCCCCCcCeeEEee
Q psy13251 115 CLSTECNGVCGLPPGYTSRCEQKY 138 (166)
Q Consensus 115 C~~~~C~~~~~lp~gY~S~CkQKY 138 (166)
|+...|+ .+|-+|+..|-||.
T Consensus 5 clyg~cr---~~pgc~~a~cc~~~ 25 (26)
T 1as5_A 5 CLYGKCR---RYPGCSSASCCQRX 25 (26)
T ss_dssp SSTTCCC---CCTTCTTCCCSCC-
T ss_pred eeccccc---cCCCcchhhhhccc
Confidence 5666777 78999999998874
No 12
>1jlp_A PSI-conotoxin PIIIF; multiple disulfide bonds, amidated C-terminus; HET: HYP; NMR {Synthetic} SCOP: j.30.1.4
Probab=23.71 E-value=35 Score=19.28 Aligned_cols=20 Identities=35% Similarity=0.821 Sum_probs=15.1
Q ss_pred ecCCccCCccCCCCCCcCeeEEe
Q psy13251 115 CLSTECNGVCGLPPGYTSRCEQK 137 (166)
Q Consensus 115 C~~~~C~~~~~lp~gY~S~CkQK 137 (166)
|...+|+ -||-+|+.-|-.|
T Consensus 5 clygscr---pfpgcynalccrk 24 (26)
T 1jlp_A 5 CLYGSCR---PFPGCYNALCCRK 24 (26)
T ss_dssp CSTTSCC---CCTTTTTSSTTCC
T ss_pred eeecccc---CCCchhhhhheec
Confidence 5566777 6899999988554
Done!