RPS-BLAST 2.2.26 [Sep-21-2011]
Database: pdb70
27,921 sequences; 6,701,793 total letters
Searching..................................................done
Query= psy13252
(558 letters)
>2jjd_A Receptor-type tyrosine-protein phosphatase epsilo; transmembrane,
phosphoprotein, consorti structural, glycoprotein, SGC,
PTPRE, membrane genomics; 3.20A {Homo sapiens}
Length = 599
Score = 428 bits (1102), Expect = e-144
Identities = 147/448 (32%), Positives = 214/448 (47%), Gaps = 45/448 (10%)
Query: 23 SNPPDMAPITRADIVMEYDERHYDSDYGFQQEFEQLVNEHFPDRSTKASEARENQHKNRY 82
S P PI + E R D F++EF L + + + EN+ KNRY
Sbjct: 2 SGPKKYFPIPVEHLEEEIRIRSADDCKQFREEFNSL-PSGHIQGTFELANKEENREKNRY 60
Query: 83 PDIKAYDQTRVKLTPVDGVPGSDYINANFVLGYKELKKFICAQGPMEHTVNDFWRMIWEQ 142
P+I D +RV L+ +DG+P SDYINA+++ GYKE KFI AQGP + TVNDFWRM+WEQ
Sbjct: 61 PNILPNDHSRVILSQLDGIPCSDYINASYIDGYKEKNKFIAAQGPKQETVNDFWRMVWEQ 120
Query: 143 HLEIVIMLTNLEEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKKFGEYILRELKLVRTA 202
++MLTNL+E + KC +YWP ++G TYG+ V + + +Y +R+ +
Sbjct: 121 KSATIVMLTNLKERKEEKCHQYWP--DQGCWTYGNIRVCVEDCVVLVDYTIRKFCIQPQL 178
Query: 203 SGKESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKGPILVHCRALV---- 258
R + Q H+ +W DF P P G+LKF+K V + GPI+VHC A V
Sbjct: 179 PDGCKAPRLVSQLHFTSWPDFGVPFTPIGMLKFLKKVKTLNPVHAGPIVVHCSAGVGRTG 238
Query: 259 ------EVVQFGETEIRATDLKSTLETL--KRVNDGNKKSELELEFEETHNKCSDHLIRS 310
++ E + D+ + + +R ++++
Sbjct: 239 TFIVIDAMMAMMHAE-QKVDVFEFVSRIRNQRP----------------------QMVQT 275
Query: 311 ACQFYLIHQ-VNLASGPDQVYVLRLTQAKEENKSTTNAKSEDLTVLGV---RLTQAKEEN 366
Q+ I+Q + + + K D L +LT +
Sbjct: 276 DMQYTFIYQALLEYYLYGDTELDVSSLEKHLQTMHGTTTHFDKIGLEEEFRKLTNVRIMK 335
Query: 367 KSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTESFIITQ 424
++ N K R IIPYD NRVILS + Y++YINASFI+ Y + FI TQ
Sbjct: 336 ENMRTGNLPANMKKARVIQIIPYDFNRVILSMKRGQEYTDYINASFIDGYRQKDYFIATQ 395
Query: 425 DPDMEHTVHDFWRMISEHTISTIIMLSD 452
P + HTV DFWRMI E TI+ML++
Sbjct: 396 GP-LAHTVEDFWRMIWEWKSHTIVMLTE 422
Score = 268 bits (688), Expect = 1e-82
Identities = 68/222 (30%), Positives = 106/222 (47%), Gaps = 5/222 (2%)
Query: 38 MEYDERHYDSDYGFQQEFEQLVNEHFPDRSTKASEARENQHKNRYPDIKAYDQTRVKLTP 97
+ + G ++EF +L N + + N K R I YD RV L+
Sbjct: 308 TMHGTTTHFDKIGLEEEFRKLTNVRIMKENMRTGNLPANMKKARVIQIIPYDFNRVILSM 367
Query: 98 VDGVPGSDYINANFVLGYKELKKFICAQGPMEHTVNDFWRMIWEQHLEIVIMLTNLEEYS 157
G +DYINA+F+ GY++ FI QGP+ HTV DFWRMIWE ++MLT ++E
Sbjct: 368 KRGQEYTDYINASFIDGYRQKDYFIATQGPLAHTVEDFWRMIWEWKSHTIVMLTEVQERE 427
Query: 158 KIKCAKYWPEQEEGDKTYGDFIVGLVNEKKFGEYILRELKLVRTA--SGKESEERSIFQY 215
+ KC +YWP EG T+G+ + + N+ +R+ + + + + R + Q+
Sbjct: 428 QDKCYQYWP--TEGSVTHGEITIEIKNDTLSEAISIRDFLVTLNQPQARQGEQVRVVRQF 485
Query: 216 HYLAWKDFQAPENPSGLLKFIKHVNEAYSLEK-GPILVHCRA 256
H+ W + P G++ I V + PI VHC A
Sbjct: 486 HFHGWPEIGIPAEGKGMIDLIAAVQKQQQQTGNHPITVHCSA 527
Score = 129 bits (326), Expect = 5e-32
Identities = 45/105 (42%), Positives = 61/105 (58%), Gaps = 4/105 (3%)
Query: 452 DRLTQAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAY 509
+LT + ++ N K R IIPYD NRVILS + Y++YINASFI+ Y
Sbjct: 326 RKLTNVRIMKENMRTGNLPANMKKARVIQIIPYDFNRVILSMKRGQEYTDYINASFIDGY 385
Query: 510 DNTESFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK 554
+ FI TQ P + HTV DFWRMI E TI+ML++ ++E +
Sbjct: 386 RQKDYFIATQGP-LAHTVEDFWRMIWEWKSHTIVMLTE-VQEREQ 428
Score = 115 bits (290), Expect = 2e-27
Identities = 42/104 (40%), Positives = 58/104 (55%), Gaps = 7/104 (6%)
Query: 361 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTE 418
+ + A EEN++KNR +I+P D +RVILS S+YINAS+I+ Y
Sbjct: 38 PSGHIQGTFELANKEENREKNRYPNILPNDHSRVILSQLDGIPCSDYINASYIDGYKEKN 97
Query: 419 SFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
FI Q P + TV+DFWRM+ E +TI+M LT KE +
Sbjct: 98 KFIAAQGP-KQETVNDFWRMVWEQKSATIVM----LTNLKERKE 136
Score = 115 bits (289), Expect = 3e-27
Identities = 41/101 (40%), Positives = 60/101 (59%), Gaps = 4/101 (3%)
Query: 456 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTE 513
+ + A EEN++KNR +I+P D +RVILS S+YINAS+I+ Y
Sbjct: 38 PSGHIQGTFELANKEENREKNRYPNILPNDHSRVILSQLDGIPCSDYINASYIDGYKEKN 97
Query: 514 SFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK 554
FI Q P + TV+DFWRM+ E +TI+ML++ L+E +
Sbjct: 98 KFIAAQGP-KQETVNDFWRMVWEQKSATIVMLTN-LKERKE 136
>1ygr_A CD45 protein tyrosine phosphatase; protein tyrosine phosphatase,
RPTP, LCA, lymphocyte activation, hydrolase; HET: PTR;
2.90A {Homo sapiens} PDB: 1ygu_A*
Length = 610
Score = 417 bits (1073), Expect = e-140
Identities = 139/465 (29%), Positives = 221/465 (47%), Gaps = 65/465 (13%)
Query: 25 PPDMAPITRADIVMEYDERHYDSDYGFQQEFEQLVNEHFPDRSTKASEARENQHKNRYPD 84
++ PI ++ Y + D F EF+ + F K + NQ+KNRY D
Sbjct: 4 LMNVEPIHADILLETYKRKIADEGRPFLAEFQSI-PRVFSKFPIKEARKPFNQNKNRYVD 62
Query: 85 IKAYDQTRVKLTPVDGVPGSDYINANFVLGYKELKKFICAQGPMEHTVNDFWRMIWEQHL 144
I YD RV+L+ ++G GS+YINA+++ G+KE +K+I AQGP + TV+DFWRMIWEQ
Sbjct: 63 ILPYDYNRVELSEINGDAGSNYINASYIDGFKEPRKYIAAQGPRDETVDDFWRMIWEQKA 122
Query: 145 EIVIMLTNLEEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKKFGEYILRELKLVRTASG 204
+++M+T EE ++ KCA+YWP EEG + +GD +V + K+ +YI+++L +V
Sbjct: 123 TVIVMVTRCEEGNRNKCAEYWPSMEEGTRAFGDVVVKINQHKRCPDYIIQKLNIVNK--K 180
Query: 205 KESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKGPILVHC-----R---- 255
+++ R + + +W D PE+P LLK + VN + GPI+VH R
Sbjct: 181 EKATGREVTHIQFTSWPDHGVPEDPHLLLKLRRRVNAFSNFFSGPIVVHSSAGVGRTGTY 240
Query: 256 -ALVEVVQFGETEIRATDLKSTLETL--KRVNDGNKKSELELEFEETHNKCSDHLIRSAC 312
+ +++ E E D+ + L +R +++
Sbjct: 241 IGIDAMLEGLEAE-NKVDVYGYVVKLRRQRC----------------------LMVQVEA 277
Query: 313 QFYLIHQV----NLASGPDQVYVLRLTQAKEENKSTTNAKSEDLTVLGVRLTQAKEENKS 368
Q+ LIHQ N + K ++ L RL + ++
Sbjct: 278 QYILIHQALVEYNQFGETEVNLSELHPYLHNMKKRDPPSEPSPLEAEFQRLPSYRSW-RT 336
Query: 369 TTNAKSEENKDKNRDESIIPYDRNRVILS---------------------PAKDYSNYIN 407
EENK KNR+ ++IPYD NRV L +++ S YIN
Sbjct: 337 QHIGNQEENKSKNRNSNVIPYDYNRVPLKHELEMSKESEHDSDESSDDDSDSEEPSKYIN 396
Query: 408 ASFIEAYDNTESFIITQDPDMEHTVHDFWRMISEHTISTIIMLSD 452
ASFI +Y E I Q P ++ T+ DFW+MI + + I+ML++
Sbjct: 397 ASFIMSYWKPEVMIAAQGP-LKETIGDFWQMIFQRKVKVIVMLTE 440
Score = 243 bits (621), Expect = 6e-73
Identities = 73/276 (26%), Positives = 118/276 (42%), Gaps = 38/276 (13%)
Query: 10 ICRTLRRSHIPVASNPPDMAPITRADIVMEYDERHYDSDYGFQQEFEQLVNEHFPDRSTK 69
I + L + + + EF++L + R+
Sbjct: 282 IHQALVEYNQFGETEVNLSELHPYLH--NMKKRDPPSEPSPLEAEFQRL-PSYRSWRTQH 338
Query: 70 ASEARENQHKNRYPDIKAYDQTRVKLT-------------------PVDGVPGSDYINAN 110
EN+ KNR ++ YD RV L D S YINA+
Sbjct: 339 IGNQEENKSKNRNSNVIPYDYNRVPLKHELEMSKESEHDSDESSDDDSDSEEPSKYINAS 398
Query: 111 FVLGYKELKKFICAQGPMEHTVNDFWRMIWEQHLEIVIMLTNLEEYSKIKCAKYWPEQEE 170
F++ Y + + I AQGP++ T+ DFW+MI+++ +++++MLT L+ + CA+YW E
Sbjct: 399 FIMSYWKPEVMIAAQGPLKETIGDFWQMIFQRKVKVIVMLTELKHGDQEICAQYWG---E 455
Query: 171 GDKTYGDFIVGLVNEKKFGEYILRELKLVRTASGKESEERSIFQYHYLAWKDFQAPENPS 230
G +TYGD V L + K Y LR +L + K + R+++QY Y W Q P P
Sbjct: 456 GKQTYGDIEVDLKDTDKSSTYTLRVFELRHS---KRKDSRTVYQYQYTNWSVEQLPAEPK 512
Query: 231 GLLKFIKHVNEAYSLEK----------GPILVHCRA 256
L+ I+ V + + P+L+HCR
Sbjct: 513 ELISMIQVVKQKLPQKNSSEGNKHHKSTPLLIHCRD 548
Score = 116 bits (293), Expect = 9e-28
Identities = 39/104 (37%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 361 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTE 418
A+ N++KNR I+PYD NRV LS SNYINAS+I+ +
Sbjct: 38 PRVFSKFPIKEARKPFNQNKNRYVDILPYDYNRVELSEINGDAGSNYINASYIDGFKEPR 97
Query: 419 SFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
+I Q P + TV DFWRMI E + I+M +T+ +E N+
Sbjct: 98 KYIAAQGP-RDETVDDFWRMIWEQKATVIVM----VTRCEEGNR 136
Score = 116 bits (292), Expect = 1e-27
Identities = 43/168 (25%), Positives = 73/168 (43%), Gaps = 25/168 (14%)
Query: 410 FI-EAYDNTESFIITQDPDMEHTVHDF-WRMISEHTISTIIMLSDRLTQAKEENKSTTNA 467
I +A F T+ E + + + + + + + ++
Sbjct: 281 LIHQALVEYNQFGETEVNLSELHPYLHNMKKRDPPSEPSPLEAEFQRLPSYRSWRTQHIG 340
Query: 468 KSEENKDKNRDESIIPYDRNRVILS---------------------PAKDYSNYINASFI 506
EENK KNR+ ++IPYD NRV L +++ S YINASFI
Sbjct: 341 NQEENKSKNRNSNVIPYDYNRVPLKHELEMSKESEHDSDESSDDDSDSEEPSKYINASFI 400
Query: 507 EAYDNTESFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK 554
+Y E I Q P ++ T+ DFW+MI + + I+ML++ L+ ++
Sbjct: 401 MSYWKPEVMIAAQGP-LKETIGDFWQMIFQRKVKVIVMLTE-LKHGDQ 446
Score = 116 bits (292), Expect = 1e-27
Identities = 39/101 (38%), Positives = 53/101 (52%), Gaps = 4/101 (3%)
Query: 456 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTE 513
A+ N++KNR I+PYD NRV LS SNYINAS+I+ +
Sbjct: 38 PRVFSKFPIKEARKPFNQNKNRYVDILPYDYNRVELSEINGDAGSNYINASYIDGFKEPR 97
Query: 514 SFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK 554
+I Q P + TV DFWRMI E + I+M++ EE N+
Sbjct: 98 KYIAAQGP-RDETVDDFWRMIWEQKATVIVMVTR-CEEGNR 136
>1lar_A Protein (LAR); tyrosine phosphatease, LAR protein, hydrolase; 2.00A
{Homo sapiens} SCOP: c.45.1.2 c.45.1.2 PDB: 2fh7_A
2nv5_A
Length = 575
Score = 409 bits (1053), Expect = e-137
Identities = 131/447 (29%), Positives = 217/447 (48%), Gaps = 53/447 (11%)
Query: 34 ADIVMEYDERHYDSDYGFQQEFEQLVNEHFPDRSTKASEARENQHKNRYPDIKAYDQTRV 93
D+ + + F QE+E + + + + S N+ KNRY ++ AYD +RV
Sbjct: 3 TDLADNIERLKANDGLKFSQEYESI--DPGQQFTWENSNLEVNKPKNRYANVIAYDHSRV 60
Query: 94 KLTPVDGVPGSDYINANFVLGYKELKKFICAQGPMEHTVNDFWRMIWEQHLEIVIMLTNL 153
LT +DGVPGSDYINAN++ GY++ +I QGP+ T+ DFWRM+WEQ V+M+T L
Sbjct: 61 ILTSIDGVPGSDYINANYIDGYRKQNAYIATQGPLPETMGDFWRMVWEQRTATVVMMTRL 120
Query: 154 EEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKKFGEYILRELKLVRTASGKESEERSIF 213
EE S++KC +YWP G +T G V L++ + Y +R L ++ SE+R +
Sbjct: 121 EEKSRVKCDQYWP--ARGTETCGLIQVTLLDTVELATYTVRTFALHKS---GSSEKRELR 175
Query: 214 QYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKGPILVHCRALV----------EVVQF 263
Q+ ++AW D PE P+ +L F++ V L+ GP++VHC A V +++
Sbjct: 176 QFQFMAWPDHGVPEYPTPILAFLRRVKACNPLDAGPMVVHCSAGVGRTGCFIVIDAMLER 235
Query: 264 GETEIRATDLKSTLETL--KRVNDGNKKSELELEFEETHNKCSDHLIRSACQFYLIHQV- 320
+ E + D+ + + +R ++++ Q+ IH+
Sbjct: 236 MKHE-KTVDIYGHVTCMRSQRNY----------------------MVQTEDQYVFIHEAL 272
Query: 321 ---NLASGPDQVYVLRLTQAKEENKSTTNAKSEDLTVLGVRLTQAKEENKSTTNAKSEEN 377
+ ++ + + + L +K +A N
Sbjct: 273 LEAATCGHTEVPARNLYAHIQKLGQVPPGESVTAMELEFKLLASSKAHTSRFISANLPCN 332
Query: 378 KDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTESFIITQDPDMEHTVHDF 435
K KNR +I+PY+ RV L P + S+YINASF++ Y +++I TQ P + + DF
Sbjct: 333 KFKNRLVNIMPYELTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGP-LAESTEDF 391
Query: 436 WRMISEHTISTIIMLSDRLTQAKEENK 462
WRM+ EH + I+M LT+ +E +
Sbjct: 392 WRMLWEHNSTIIVM----LTKLREMGR 414
Score = 261 bits (670), Expect = 2e-80
Identities = 80/233 (34%), Positives = 119/233 (51%), Gaps = 7/233 (3%)
Query: 26 PDMAPITRADIVMEYDERHYDSDYGFQQEFEQLVNEHFPDRSTKASEARENQHKNRYPDI 85
A A I +S + EF+ L + ++ N+ KNR +I
Sbjct: 282 EVPARNLYAHIQKLGQVPPGESVTAMELEFKLLASSKAHTSRFISANLPCNKFKNRLVNI 341
Query: 86 KAYDQTRVKLTPVDGVPGSDYINANFVLGYKELKKFICAQGPMEHTVNDFWRMIWEQHLE 145
Y+ TRV L P+ GV GSDYINA+F+ GY++ K +I QGP+ + DFWRM+WE +
Sbjct: 342 MPYELTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGPLAESTEDFWRMLWEHNST 401
Query: 146 IVIMLTNLEEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKKFGEYILRELKLVRTASGK 205
I++MLT L E + KC +YWP E Y F+V + E +YILRE K+ +
Sbjct: 402 IIVMLTKLREMGREKCHQYWP--AERSARYQYFVVDPMAEYNMPQYILREFKVTDA---R 456
Query: 206 ESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSL--EKGPILVHCRA 256
+ + R+I Q+ + W + P+ G + FI V++ + GPI VHC A
Sbjct: 457 DGQSRTIRQFQFTDWPEQGVPKTGEGFIDFIGQVHKTKEQFGQDGPITVHCSA 509
Score = 127 bits (321), Expect = 2e-31
Identities = 39/134 (29%), Positives = 68/134 (50%), Gaps = 4/134 (2%)
Query: 423 TQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENKSTTNAKSEENKDKNRDESII 482
++ + ++ +++ + + L +K +A NK KNR +I+
Sbjct: 283 VPARNLYAHIQKLGQVPPGESVTAMELEFKLLASSKAHTSRFISANLPCNKFKNRLVNIM 342
Query: 483 PYDRNRVILSPAKD--YSNYINASFIEAYDNTESFIITQDPDMEHTVHDFWRMISEHTIS 540
PY+ RV L P + S+YINASF++ Y +++I TQ P + + DFWRM+ EH +
Sbjct: 343 PYELTRVCLQPIRGVEGSDYINASFLDGYRQQKAYIATQGP-LAESTEDFWRMLWEHNST 401
Query: 541 TIIMLSDGLEETNK 554
I+ML+ L E +
Sbjct: 402 IIVMLTK-LREMGR 414
Score = 113 bits (286), Expect = 6e-27
Identities = 37/97 (38%), Positives = 60/97 (61%), Gaps = 4/97 (4%)
Query: 460 ENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTESFII 517
+ + N+ E NK KNR ++I YD +RVIL+ S+YINA++I+ Y ++I
Sbjct: 31 QQFTWENSNLEVNKPKNRYANVIAYDHSRVILTSIDGVPGSDYINANYIDGYRKQNAYIA 90
Query: 518 TQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK 554
TQ P + T+ DFWRM+ E +T++M++ LEE ++
Sbjct: 91 TQGP-LPETMGDFWRMVWEQRTATVVMMTR-LEEKSR 125
>2nlk_A Protein tyrosine phosphatase, receptor type, G VA (fragment);
PTPRG, R-PTP gamma, protein tyrosine phosphatase gamma,
D3S1 HPTPG, RPTPG, PTPG; 2.40A {Homo sapiens}
Length = 627
Score = 406 bits (1046), Expect = e-135
Identities = 146/451 (32%), Positives = 217/451 (48%), Gaps = 54/451 (11%)
Query: 30 PITRADIVMEYDERHYDSDYGFQQEFEQLVN-EHFPDRSTKASEARENQHKNRYPDIKAY 88
I V E + ++ +GF ++FE++ + + + S EN+HKNRY +I AY
Sbjct: 2 AIPVKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKHKNRYINILAY 61
Query: 89 DQTRVKLTPVDGV--PGSDYINANFVLGYKELKKFICAQGPMEHTVNDFWRMIWEQHLEI 146
D +RVKL P+ G SDYINAN+V GY + K +I QGP++ T DFWRMIWEQ+ I
Sbjct: 62 DHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFWRMIWEQNTGI 121
Query: 147 VIMLTNLEEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKKFGEYILRELKLVRTASGK- 205
++M+TNL E + KC +YWP E + YG+ IV L + K Y +R + T K
Sbjct: 122 IVMITNLVEKGRRKCDQYWP--TENSEEYGNIIVTLKSTKIHACYTVRRFSIRNTKVKKG 179
Query: 206 -------ESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKGPILVHCRALV 258
ER + QYHY W D PE +L F++ + A E GP+LVHC A V
Sbjct: 180 QKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPETGPVLVHCSAGV 239
Query: 259 ----------EVVQFGETEIRATDLKSTLETL--KRVNDGNKKSELELEFEETHNKCSDH 306
++Q + + ++ L+ + +R +
Sbjct: 240 GRTGTYIVIDSMLQQIKDK-STVNVLGFLKHIRTQRN----------------------Y 276
Query: 307 LIRSACQFYLIHQV---NLASGPDQVYVLRLTQAKEENKSTTNAKSEDLTVLGVRLTQAK 363
L+++ Q+ IH + +V +L L +TQ
Sbjct: 277 LVQTEEQYIFIHDALLEAILGKETEVSSNQLHSYVNSILIPGVGGKTRLEKQFKLVTQCN 336
Query: 364 EENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTESFI 421
+ +A+ E NK+KNR+ S++P +R RV L+P ++YINAS+I Y + FI
Sbjct: 337 AKYVECFSAQKECNKEKNRNSSVVPSERARVGLAPLPGMKGTDYINASYIMGYYRSNEFI 396
Query: 422 ITQDPDMEHTVHDFWRMISEHTISTIIMLSD 452
ITQ P + HT DFWRMI +H I+ML D
Sbjct: 397 ITQHP-LPHTTKDFWRMIWDHNAQIIVMLPD 426
Score = 248 bits (634), Expect = 1e-74
Identities = 55/225 (24%), Positives = 101/225 (44%), Gaps = 12/225 (5%)
Query: 37 VMEYDERHYDSDYGFQQEFEQLVNEHFPDRSTKASEARENQHKNRYPDIKAYDQTRVKLT 96
V +++F+ + + +++ N+ KNR + ++ RV L
Sbjct: 311 VNSILIPGVGGKTRLEKQFKLVTQCNAKYVECFSAQKECNKEKNRNSSVVPSERARVGLA 370
Query: 97 PVDGVPGSDYINANFVLGYKELKKFICAQGPMEHTVNDFWRMIWEQHLEIVIMLTNLEEY 156
P+ G+ G+DYINA++++GY +FI Q P+ HT DFWRMIW+ + +I++ML + +
Sbjct: 371 PLPGMKGTDYINASYIMGYYRSNEFIITQHPLPHTTKDFWRMIWDHNAQIIVMLPDNQSL 430
Query: 157 SKIKCAKYWPEQEEGDKTYGDFIVGLVNEKKFG-----EYILRELKLVRTASGKESEERS 211
++ YWP E F V L+++ + + I+ + L T ++
Sbjct: 431 AE-DEFVYWPS-REESMNCEAFTVTLISKDRLCLSNEEQIIIHDFILEAT---QDDYVLE 485
Query: 212 IFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKGPILVHCRA 256
+ + W + AP S + I + E GP +VH
Sbjct: 486 VRHFQCPKWPNPDAP--ISSTFELINVIKEEALTRDGPTIVHDEY 528
Score = 127 bits (320), Expect = 4e-31
Identities = 48/146 (32%), Positives = 74/146 (50%), Gaps = 7/146 (4%)
Query: 418 ESFIITQDPDMEHTVHDFWRMISEHTISTIIMLSD---RLTQAKEENKSTTNAKSEENKD 474
E+ + + + +H + I + L +TQ + +A+ E NK+
Sbjct: 293 EAILGKETEVSSNQLHSYVNSILIPGVGGKTRLEKQFKLVTQCNAKYVECFSAQKECNKE 352
Query: 475 KNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTESFIITQDPDMEHTVHDFWR 532
KNR+ S++P +R RV L+P ++YINAS+I Y + FIITQ P + HT DFWR
Sbjct: 353 KNRNSSVVPSERARVGLAPLPGMKGTDYINASYIMGYYRSNEFIITQHP-LPHTTKDFWR 411
Query: 533 MISEHTISTIIMLSDGLE-ETNKFRY 557
MI +H I+ML D ++F Y
Sbjct: 412 MIWDHNAQIIVMLPDNQSLAEDEFVY 437
Score = 115 bits (289), Expect = 3e-27
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Query: 361 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD----YSNYINASFIEAYDN 416
+ N + ++ ENK KNR +I+ YD +RV L P +S+YINA++++ Y+
Sbjct: 33 CTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNK 92
Query: 417 TESFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
+++I TQ P ++ T DFWRMI E I+M +T E+ +
Sbjct: 93 AKAYIATQGP-LKSTFEDFWRMIWEQNTGIIVM----ITNLVEKGR 133
Score = 114 bits (288), Expect = 4e-27
Identities = 36/103 (34%), Positives = 60/103 (58%), Gaps = 6/103 (5%)
Query: 456 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD----YSNYINASFIEAYDN 511
+ N + ++ ENK KNR +I+ YD +RV L P +S+YINA++++ Y+
Sbjct: 33 CTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNK 92
Query: 512 TESFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK 554
+++I TQ P ++ T DFWRMI E I+M+++ L E +
Sbjct: 93 AKAYIATQGP-LKSTFEDFWRMIWEQNTGIIVMITN-LVEKGR 133
>1yfo_A D1, receptor protein tyrosine phosphatase alpha; hydrolase, signal
transduction, glycoprotein, phosphorylation, signal;
2.25A {Mus musculus} SCOP: c.45.1.2
Length = 302
Score = 322 bits (827), Expect = e-107
Identities = 97/235 (41%), Positives = 137/235 (58%), Gaps = 4/235 (1%)
Query: 23 SNPPDMAPITRADIVMEYDERHYDSDYGFQQEFEQLVNEHFPDRSTKASEARENQHKNRY 82
S P+ + E + R D + F++EF L + +A+ EN+ KNRY
Sbjct: 3 STNRKYPPLPVDKLEEEINRRMADDNKLFREEFNAL-PACPIQATCEAASKEENKEKNRY 61
Query: 83 PDIKAYDQTRVKLTPVDGVPGSDYINANFVLGYKELKKFICAQGPMEHTVNDFWRMIWEQ 142
+I YD +RV LTPV+GVP SDYINA+F+ GY+E KFI AQGP E TVNDFWRMIWEQ
Sbjct: 62 VNILPYDHSRVHLTPVEGVPDSDYINASFINGYQEKNKFIAAQGPKEETVNDFWRMIWEQ 121
Query: 143 HLEIVIMLTNLEEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKKFGEYILRELKLVRTA 202
+ ++M+TNL+E + KCA+YWP ++G TYG+ V + + +Y +R+ + +
Sbjct: 122 NTATIVMVTNLKERKECKCAQYWP--DQGCWTYGNVRVSVEDVTVLVDYTVRKFCIQQVG 179
Query: 203 SG-KESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKGPILVHCRA 256
+R I Q+H+ +W DF P P G+LKF+K V G I+VHC A
Sbjct: 180 DVTNRKPQRLITQFHFTSWPDFGVPFTPIGMLKFLKKVKACNPQYAGAIVVHCSA 234
Score = 113 bits (285), Expect = 4e-28
Identities = 46/104 (44%), Positives = 59/104 (56%), Gaps = 7/104 (6%)
Query: 361 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTE 418
A + A EENK+KNR +I+PYD +RV L+P + S+YINASFI Y
Sbjct: 39 PACPIQATCEAASKEENKEKNRYVNILPYDHSRVHLTPVEGVPDSDYINASFINGYQEKN 98
Query: 419 SFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
FI Q P E TV+DFWRMI E +TI+M +T KE +
Sbjct: 99 KFIAAQGP-KEETVNDFWRMIWEQNTATIVM----VTNLKERKE 137
Score = 112 bits (282), Expect = 9e-28
Identities = 45/101 (44%), Positives = 61/101 (60%), Gaps = 4/101 (3%)
Query: 456 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTE 513
A + A EENK+KNR +I+PYD +RV L+P + S+YINASFI Y
Sbjct: 39 PACPIQATCEAASKEENKEKNRYVNILPYDHSRVHLTPVEGVPDSDYINASFINGYQEKN 98
Query: 514 SFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK 554
FI Q P E TV+DFWRMI E +TI+M+++ L+E +
Sbjct: 99 KFIAAQGP-KEETVNDFWRMIWEQNTATIVMVTN-LKERKE 137
>2ooq_A Receptor-type tyrosine-protein phosphatase T; protein tyrosine
phosphatase, human, structural GE structural genomics
consortium, SGC, hydrolase; HET: B3P; 1.80A {Homo
sapiens} PDB: 1rpm_A 2c7s_A
Length = 286
Score = 314 bits (807), Expect = e-104
Identities = 86/227 (37%), Positives = 130/227 (57%), Gaps = 8/227 (3%)
Query: 30 PITRADIVMEYDERHYDSDYGFQQEFEQLVNEHFPDRSTKASEARENQHKNRYPDIKAYD 89
I AD++ + YGF++E+E L S ++ EN++KNRY +I +YD
Sbjct: 3 AIRVADLLQHITQMKRGQGYGFKEEYEAL--PEGQTASWDTAKEDENRNKNRYGNIISYD 60
Query: 90 QTRVKLTPVDGVPGSDYINANFVLGYKELKKFICAQGPMEHTVNDFWRMIWEQHLEIVIM 149
+RV+L +DG P SDYINAN++ GY + +I QGPM+ TV DFWRMIW+++ ++M
Sbjct: 61 HSRVRLLVLDGDPHSDYINANYIDGYHRPRHYIATQGPMQETVKDFWRMIWQENSASIVM 120
Query: 150 LTNLEEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKKFGEYILRELKLVRTASGKESEE 209
+TNL E ++KC +YWP+ E YGD V L+ + EY++R + + E
Sbjct: 121 VTNLVEVGRVKCVRYWPDDTE---VYGDIKVTLIETEPLAEYVIRTFTVQKK---GYHEI 174
Query: 210 RSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKGPILVHCRA 256
R + +H+ +W D P +GLL F++ V E GPI+VHC A
Sbjct: 175 RELRLFHFTSWPDHGVPCYATGLLGFVRQVKFLNPPEAGPIVVHCSA 221
Score = 112 bits (283), Expect = 5e-28
Identities = 39/102 (38%), Positives = 59/102 (57%), Gaps = 7/102 (6%)
Query: 363 KEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTESF 420
+ + S AK +EN++KNR +II YD +RV L +S+YINA++I+ Y +
Sbjct: 33 EGQTASWDTAKEDENRNKNRYGNIISYDHSRVRLLVLDGDPHSDYINANYIDGYHRPRHY 92
Query: 421 IITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
I TQ P M+ TV DFWRMI + ++I+M +T E +
Sbjct: 93 IATQGP-MQETVKDFWRMIWQENSASIVM----VTNLVEVGR 129
Score = 111 bits (281), Expect = 9e-28
Identities = 39/99 (39%), Positives = 61/99 (61%), Gaps = 4/99 (4%)
Query: 458 KEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTESF 515
+ + S AK +EN++KNR +II YD +RV L +S+YINA++I+ Y +
Sbjct: 33 EGQTASWDTAKEDENRNKNRYGNIISYDHSRVRLLVLDGDPHSDYINANYIDGYHRPRHY 92
Query: 516 IITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK 554
I TQ P M+ TV DFWRMI + ++I+M+++ L E +
Sbjct: 93 IATQGP-MQETVKDFWRMIWQENSASIVMVTN-LVEVGR 129
>3s3e_A Tyrosine-protein phosphatase 10D; differentiation, neurogenesis,
signal transduction, developm protein, hydrolase; 2.40A
{Drosophila melanogaster} PDB: 3s3f_A 3s3h_A* 3s3k_A*
Length = 307
Score = 313 bits (803), Expect = e-103
Identities = 85/240 (35%), Positives = 128/240 (53%), Gaps = 8/240 (3%)
Query: 17 SHIPVASNPPDMAPITRADIVMEYDERHYDSDYGFQQEFEQLVNEHFPDRSTKASEAREN 76
+P S+ PI + Y DSD+ F +EFE+L D+ ++ N
Sbjct: 13 GLVPRGSHMAS-RPILIKNFAEHYRLMSADSDFRFSEEFEEL-KHVGRDQPCTFADLPCN 70
Query: 77 QHKNRYPDIKAYDQTRVKLTPVDGVPGSDYINANFVLGYKELKKFICAQGPMEHTVNDFW 136
+ KNR+ +I YD +R KL PVD GSDYINAN+V G+ ++FI QGP+ T +DFW
Sbjct: 71 RPKNRFTNILPYDHSRFKLQPVDDDEGSDYINANYVPGHNSPREFIVTQGPLHSTRDDFW 130
Query: 137 RMIWEQHLEIVIMLTNLEEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKKFGEYILREL 196
RM WE + ++MLT E + KC +YWP YGD V ++N+ + ++++ E
Sbjct: 131 RMCWESNSRAIVMLTRCFEKGREKCDQYWPNDTV-PVFYGDIKVQILNDSHYADWVMTEF 189
Query: 197 KLVRTASGKESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKGPILVHCRA 256
L R SE+R + +H+ W DF P P L++F++ + E+ PI+VHC A
Sbjct: 190 MLCRG-----SEQRILRHFHFTTWPDFGVPNPPQTLVRFVRAFRDRIGAEQRPIVVHCSA 244
Score = 110 bits (276), Expect = 7e-27
Identities = 36/104 (34%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 361 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTE 418
+ ++ T A N+ KNR +I+PYD +R L P D S+YINA+++ +++
Sbjct: 54 KHVGRDQPCTFADLPCNRPKNRFTNILPYDHSRFKLQPVDDDEGSDYINANYVPGHNSPR 113
Query: 419 SFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
FI+TQ P + T DFWRM E I+M LT+ E+ +
Sbjct: 114 EFIVTQGP-LHSTRDDFWRMCWESNSRAIVM----LTRCFEKGR 152
Score = 108 bits (273), Expect = 1e-26
Identities = 35/101 (34%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 456 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTE 513
+ ++ T A N+ KNR +I+PYD +R L P D S+YINA+++ +++
Sbjct: 54 KHVGRDQPCTFADLPCNRPKNRFTNILPYDHSRFKLQPVDDDEGSDYINANYVPGHNSPR 113
Query: 514 SFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK 554
FI+TQ P + T DFWRM E I+ML+ E +
Sbjct: 114 EFIVTQGP-LHSTRDDFWRMCWESNSRAIVMLTR-CFEKGR 152
>2gjt_A Receptor-type tyrosine-protein phosphatase PTPro; tyrosine
phosphatase, glepp1, PTPU2, structural genom structural
genomics consortium, SGC; 2.15A {Homo sapiens} PDB:
2g59_A 2pi7_A
Length = 295
Score = 309 bits (795), Expect = e-102
Identities = 76/231 (32%), Positives = 124/231 (53%), Gaps = 9/231 (3%)
Query: 28 MAPITRADIVMEYDERHYDSDYGFQQEFEQLVNEHFPDRSTKASEARENQHKNRYPDIKA 87
M P+ D + DSDY F +FE+L D A++ N+ KNRY +I
Sbjct: 2 MNPVQLDDFDAYIKDMAKDSDYKFSLQFEEL-KLIGLDIPHFAADLPLNRCKNRYTNILP 60
Query: 88 YDQTRVKLTPVDGVPGSDYINANFVLGYKELKKFICAQGPMEHTVNDFWRMIWEQHLEIV 147
YD +RV+L ++ G+DYINAN++ GY +++I QGP+ T NDFW+M+ +Q +I+
Sbjct: 61 YDFSRVRLVSMNEEEGADYINANYIPGYNSPQEYIATQGPLPETRNDFWKMVLQQKSQII 120
Query: 148 IMLTNLEEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKKFGEYILRELKLVRTASGKES 207
+MLT E ++KC YWP E YGD V +++E++ ++ R ++
Sbjct: 121 VMLTQCNEKRRVKCDHYWPF-TEEPIAYGDITVEMISEEEQDDWACRHFRINYA-----D 174
Query: 208 EERSIFQYHYLAWKDFQAP--ENPSGLLKFIKHVNEAYSLEKGPILVHCRA 256
E + + ++Y AW D P +L+F+ V + + KGP+++HC A
Sbjct: 175 EMQDVMHFNYTAWPDHGVPTANAAESILQFVHMVRQQATKSKGPMIIHCSA 225
Score = 113 bits (286), Expect = 2e-28
Identities = 33/104 (31%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 361 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTE 418
+ + A N+ KNR +I+PYD +RV L + ++YINA++I Y++ +
Sbjct: 33 KLIGLDIPHFAADLPLNRCKNRYTNILPYDFSRVRLVSMNEEEGADYINANYIPGYNSPQ 92
Query: 419 SFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
+I TQ P + T +DFW+M+ + I+M LTQ E+ +
Sbjct: 93 EYIATQGP-LPETRNDFWKMVLQQKSQIIVM----LTQCNEKRR 131
Score = 112 bits (283), Expect = 5e-28
Identities = 31/101 (30%), Positives = 54/101 (53%), Gaps = 4/101 (3%)
Query: 456 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTE 513
+ + A N+ KNR +I+PYD +RV L + ++YINA++I Y++ +
Sbjct: 33 KLIGLDIPHFAADLPLNRCKNRYTNILPYDFSRVRLVSMNEEEGADYINANYIPGYNSPQ 92
Query: 514 SFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK 554
+I TQ P + T +DFW+M+ + I+ML+ E +
Sbjct: 93 EYIATQGP-LPETRNDFWKMVLQQKSQIIVMLTQ-CNEKRR 131
>2h4v_A Receptor-type tyrosine-protein phosphatase gamma; tyrosine receptor
phosphatase, human, structural GENO structural genomics
consortium, SGC; HET: FLC; 1.55A {Homo sapiens} PDB:
3qcd_A 3qcc_A 3qcb_A 3qce_A* 3qcf_A* 3qcg_A* 3qch_A*
3qci_A* 3qcj_A* 3qck_A* 2pbn_A 2hy3_A 3qcm_A* 3qcl_A*
3qcn_A
Length = 320
Score = 309 bits (793), Expect = e-102
Identities = 93/248 (37%), Positives = 133/248 (53%), Gaps = 13/248 (5%)
Query: 20 PVASNPPDMAPITRADIVMEYDERHYDSDYGFQQEFEQL-VNEHFPDRSTKASEARENQH 78
V ++ + V E + ++ +GF ++FE++ + + + S EN+H
Sbjct: 10 GVDLGTENLYFQSMKQFVKHIGELYSNNQHGFSEDFEEVQRCTADMNITAEHSNHPENKH 69
Query: 79 KNRYPDIKAYDQTRVKLTPVDGV--PGSDYINANFVLGYKELKKFICAQGPMEHTVNDFW 136
KNRY +I AYD +RVKL P+ G SDYINAN+V GY + K +I QGP++ T DFW
Sbjct: 70 KNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNKAKAYIATQGPLKSTFEDFW 129
Query: 137 RMIWEQHLEIVIMLTNLEEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKKFGEYILREL 196
RMIWEQ+ I++M+TNL E + KC +YWP E + YG+ IV L + K Y +R
Sbjct: 130 RMIWEQNTGIIVMITNLVEKGRRKCDQYWP--TENSEEYGNIIVTLKSTKIHACYTVRRF 187
Query: 197 KLVRTASGK--------ESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKG 248
+ T K ER + QYHY W D PE +L F++ + A E G
Sbjct: 188 SIRNTKVKKGQKGNPKGRQNERVVIQYHYTQWPDMGVPEYALPVLTFVRRSSAARMPETG 247
Query: 249 PILVHCRA 256
P+LVHC A
Sbjct: 248 PVLVHCSA 255
Score = 110 bits (277), Expect = 6e-27
Identities = 36/106 (33%), Positives = 59/106 (55%), Gaps = 9/106 (8%)
Query: 361 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD----YSNYINASFIEAYDN 416
+ N + ++ ENK KNR +I+ YD +RV L P +S+YINA++++ Y+
Sbjct: 51 CTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNK 110
Query: 417 TESFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
+++I TQ P ++ T DFWRMI E I+M +T E+ +
Sbjct: 111 AKAYIATQGP-LKSTFEDFWRMIWEQNTGIIVM----ITNLVEKGR 151
Score = 109 bits (275), Expect = 1e-26
Identities = 36/103 (34%), Positives = 60/103 (58%), Gaps = 6/103 (5%)
Query: 456 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD----YSNYINASFIEAYDN 511
+ N + ++ ENK KNR +I+ YD +RV L P +S+YINA++++ Y+
Sbjct: 51 CTADMNITAEHSNHPENKHKNRYINILAYDHSRVKLRPLPGKDSKHSDYINANYVDGYNK 110
Query: 512 TESFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK 554
+++I TQ P ++ T DFWRMI E I+M+++ L E +
Sbjct: 111 AKAYIATQGP-LKSTFEDFWRMIWEQNTGIIVMITN-LVEKGR 151
>2oc3_A Tyrosine-protein phosphatase non-receptor type 18; protein tyrosine
phosphatase, human, structural genomics, structural
genomics consortium, SGC; 1.50A {Homo sapiens}
Length = 303
Score = 308 bits (791), Expect = e-102
Identities = 73/240 (30%), Positives = 112/240 (46%), Gaps = 14/240 (5%)
Query: 23 SNPPDMAPITRADIVMEYDERHYDSDYGFQQEFEQLVN-----EHFPDRSTKASEARENQ 77
+P P + + + R EF + + ST A EN
Sbjct: 4 GSPGI--PDSARSFLERLEARGGREGAVLAGEFSDIQACSAAWKADGVCSTVAGSRPENV 61
Query: 78 HKNRYPDIKAYDQTRVKLTPVDGVPGSDYINANFVLGYKELKKFICAQGPMEHTVNDFWR 137
KNRY D+ YDQTRV L+ + SDYIN NF+ G +I QGP+ HT+ DFWR
Sbjct: 62 RKNRYKDVLPYDQTRVILSLLQEEGHSDYINGNFIRGVDGSLAYIATQGPLPHTLLDFWR 121
Query: 138 MIWEQHLEIVIMLTNLEEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKKFGE-YILREL 196
++WE +++++M E + +C +YW +++E G F + L+ EK E +LR L
Sbjct: 122 LVWEFGVKVILMACREIENGRKRCERYWAQEQE-PLQTGLFCITLIKEKWLNEDIMLRTL 180
Query: 197 KLVRTASGKESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKGPILVHCRA 256
K+ E RS++Q Y++W D P +P +L ++ P+ VHC A
Sbjct: 181 KVTFQ-----KESRSVYQLQYMSWPDRGVPSSPDHMLAMVEEARRLQGSGPEPLCVHCSA 235
Score = 112 bits (283), Expect = 6e-28
Identities = 36/104 (34%), Positives = 57/104 (54%), Gaps = 7/104 (6%)
Query: 361 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTE 418
+ ST EN KNR + ++PYD+ RVILS ++ +S+YIN +FI D +
Sbjct: 44 WKADGVCSTVAGSRPENVRKNRYKDVLPYDQTRVILSLLQEEGHSDYINGNFIRGVDGSL 103
Query: 419 SFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
++I TQ P + HT+ DFWR++ E + I+M + E +
Sbjct: 104 AYIATQGP-LPHTLLDFWRLVWEFGVKVILM----ACREIENGR 142
Score = 111 bits (281), Expect = 1e-27
Identities = 36/101 (35%), Positives = 56/101 (55%), Gaps = 4/101 (3%)
Query: 456 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTE 513
+ ST EN KNR + ++PYD+ RVILS ++ +S+YIN +FI D +
Sbjct: 44 WKADGVCSTVAGSRPENVRKNRYKDVLPYDQTRVILSLLQEEGHSDYINGNFIRGVDGSL 103
Query: 514 SFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK 554
++I TQ P + HT+ DFWR++ E + I+M E +
Sbjct: 104 AYIATQGP-LPHTLLDFWRLVWEFGVKVILMAC-REIENGR 142
>2i1y_A Receptor-type tyrosine-protein phosphatase; receptor-type protein
tyrosine phosphatase precursor, phosph structural
genomics, PSI; 2.23A {Homo sapiens} PDB: 2qep_A
Length = 301
Score = 307 bits (789), Expect = e-101
Identities = 73/234 (31%), Positives = 118/234 (50%), Gaps = 8/234 (3%)
Query: 25 PPDMAPITRADIVMEYDERHYDSDYGFQQEFEQLVNEHFPDRSTKASEARENQHKNRYPD 84
+M I+ +++ Y E H + +E++ L + ++ N KNR+PD
Sbjct: 6 QANM-DISTGHMILAYMEDHLRNRDRLAKEWQALCAYQAEPNTCATAQGEGNIKKNRHPD 64
Query: 85 IKAYDQTRVKLTPVDGVPGSDYINANFVLG-YKELKKFICAQGPMEHTVNDFWRMIWEQH 143
YD R+KL SDYINA+ ++ + +I QGP+ HT+ DFW+M+WE
Sbjct: 65 FLPYDHARIKLKVESSPSRSDYINASPIIEHDPRMPAYIATQGPLSHTIADFWQMVWESG 124
Query: 144 LEIVIMLTNLEEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKKFGE-YILRELKLVRTA 202
+++MLT L E +C +YWP +EG Y + V LV+E + E +++R L
Sbjct: 125 CTVIVMLTPLVEDGVKQCDRYWP--DEGASLYHVYEVNLVSEHIWCEDFLVRSFYLKNV- 181
Query: 203 SGKESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKGPILVHCRA 256
+ E R++ Q+H+L+W P + LL F + VN+ Y PI+VHC
Sbjct: 182 --QTQETRTLTQFHFLSWPAEGTPASTRPLLDFRRKVNKCYRGRSCPIIVHCSD 233
Score = 109 bits (274), Expect = 1e-26
Identities = 40/135 (29%), Positives = 61/135 (45%), Gaps = 8/135 (5%)
Query: 426 PDMEHTVHDFWRMISEHTISTIIMLSD---RLTQAKEENKSTTNAKSEENKDKNRDESII 482
+M+ + E + L+ L + E + A+ E N KNR +
Sbjct: 7 ANMDISTGHMILAYMEDHLRNRDRLAKEWQALCAYQAEPNTCATAQGEGNIKKNRHPDFL 66
Query: 483 PYDRNRVILSPAKD--YSNYINASFIEAYDNTE-SFIITQDPDMEHTVHDFWRMISEHTI 539
PYD R+ L S+YINAS I +D ++I TQ P + HT+ DFW+M+ E
Sbjct: 67 PYDHARIKLKVESSPSRSDYINASPIIEHDPRMPAYIATQGP-LSHTIADFWQMVWESGC 125
Query: 540 STIIMLSDGLEETNK 554
+ I+ML+ L E
Sbjct: 126 TVIVMLTP-LVEDGV 139
Score = 108 bits (273), Expect = 1e-26
Identities = 37/108 (34%), Positives = 53/108 (49%), Gaps = 8/108 (7%)
Query: 358 RLTQAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYD 415
L + E + A+ E N KNR +PYD R+ L S+YINAS I +D
Sbjct: 37 ALCAYQAEPNTCATAQGEGNIKKNRHPDFLPYDHARIKLKVESSPSRSDYINASPIIEHD 96
Query: 416 NTE-SFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
++I TQ P + HT+ DFW+M+ E + I+M LT E+
Sbjct: 97 PRMPAYIATQGP-LSHTIADFWQMVWESGCTVIVM----LTPLVEDGV 139
>2hc1_A Receptor-type tyrosine-protein phosphatase beta; protein tyrosine
phosphatase, WPD-loop, sulfamic acid, inhibitor, drug
design, hydrolase; 1.30A {Homo sapiens} PDB: 2h03_A
2hc2_A 2i4g_A* 2h04_A* 2h02_A 2i3u_A 2i3r_A 2i4e_A*
2i4h_A* 2i5x_A* 2ahs_A
Length = 291
Score = 305 bits (783), Expect = e-100
Identities = 80/236 (33%), Positives = 126/236 (53%), Gaps = 11/236 (4%)
Query: 23 SNPPDMAPITRADIVMEYDERHYDSDYGFQQEFEQLVNEHFPDRSTKASEARENQHKNRY 82
SN PI + + DS+Y +E+E+L + ++S + EN+ KNRY
Sbjct: 1 SNRKTSCPIKINQFEGHFMKLQADSNYLLSKEYEEL-KDVGRNQSCDIALLPENRGKNRY 59
Query: 83 PDIKAYDQTRVKLTPVDGVPGSDYINANFVLGYKELKKFICAQGPMEHTVNDFWRMIWEQ 142
+I YD TRVKL+ GSDYINA+++ G +++I QGP+ T +DFW+M+WEQ
Sbjct: 60 NNILPYDATRVKLSG-----GSDYINASYIPGNNFRREYIVTQGPLPGTKDDFWKMVWEQ 114
Query: 143 HLEIVIMLTNLEEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKKFGEYILRELKLVRTA 202
++ ++M+T E ++KC YWP ++ YGD I+ +++E E+ +RE K+
Sbjct: 115 NVHNIVMVTQCVEKGRVKCDHYWPA-DQDSLYYGDLILQMLSESVLPEWTIREFKICGEE 173
Query: 203 SGKESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNE--AYSLEKGPILVHCRA 256
R I +HY W D PE L++F++ V + S GP +VHC A
Sbjct: 174 QLDAH--RLIRHFHYTVWPDHGVPETTQSLIQFVRTVRDYINRSPGAGPTVVHCSA 227
Score = 112 bits (283), Expect = 6e-28
Identities = 38/102 (37%), Positives = 55/102 (53%), Gaps = 8/102 (7%)
Query: 361 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKDYSNYINASFIEAYDNTESF 420
+ N+S A EN+ KNR +I+PYD RV LS D YINAS+I + +
Sbjct: 37 KDVGRNQSCDIALLPENRGKNRYNNILPYDATRVKLSGGSD---YINASYIPGNNFRREY 93
Query: 421 IITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
I+TQ P + T DFW+M+ E + I+M +TQ E+ +
Sbjct: 94 IVTQGP-LPGTKDDFWKMVWEQNVHNIVM----VTQCVEKGR 130
Score = 111 bits (280), Expect = 1e-27
Identities = 36/99 (36%), Positives = 53/99 (53%), Gaps = 5/99 (5%)
Query: 456 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKDYSNYINASFIEAYDNTESF 515
+ N+S A EN+ KNR +I+PYD RV LS D YINAS+I + +
Sbjct: 37 KDVGRNQSCDIALLPENRGKNRYNNILPYDATRVKLSGGSD---YINASYIPGNNFRREY 93
Query: 516 IITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK 554
I+TQ P + T DFW+M+ E + I+M++ E +
Sbjct: 94 IVTQGP-LPGTKDDFWKMVWEQNVHNIVMVTQ-CVEKGR 130
>3i36_A Vascular protein tyrosine phosphatase 1; PTP, hydrolase; 1.84A
{Rattus norvegicus} PDB: 2nz6_A 2cfv_A
Length = 342
Score = 306 bits (786), Expect = e-100
Identities = 78/251 (31%), Positives = 122/251 (48%), Gaps = 9/251 (3%)
Query: 8 RHICRTLRRSHIPVASNPPDMAPITRADIVMEYDERHYDSDYGFQQEFEQLVNEHFPDRS 67
+ P I + + ++ DS+ GF +E+E L
Sbjct: 3 KKRKDAKNNEVSFSQIKPKKSKLIRVENFEAYFKKQQADSNCGFAEEYEDLKLI-GISLP 61
Query: 68 TKASEARENQHKNRYPDIKAYDQTRVKLTPVDGVPGSDYINANFVLGYKELKKFICAQGP 127
A+E EN+ KNRY ++ YD +RVKL+ DYINAN++ GY K FI QGP
Sbjct: 62 KYAAEIAENRGKNRYNNVLPYDISRVKLSV-QTHSTDDYINANYMPGYHSKKDFIATQGP 120
Query: 128 MEHTVNDFWRMIWEQHLEIVIMLTNLEEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKK 187
+ +T+ DFWRM+WE+++ ++MLT E + KC +YWP + + YGD V + +E
Sbjct: 121 LPNTLKDFWRMVWEKNVYAIVMLTKCVEQGRTKCEEYWP--SKQAQDYGDITVAMTSEVV 178
Query: 188 FGEYILRELKLVRTASGKESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSL-- 245
E+ +R+ + + SE + Q+H+ +W D P+ L+ F V +
Sbjct: 179 LPEWTIRDFVVKNM---QSSESHPLRQFHFTSWPDHGVPDTTDLLINFRYLVRDYMKQIP 235
Query: 246 EKGPILVHCRA 256
+ PILVHC A
Sbjct: 236 PESPILVHCSA 246
Score = 112 bits (283), Expect = 1e-27
Identities = 35/103 (33%), Positives = 58/103 (56%), Gaps = 6/103 (5%)
Query: 361 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD-YSNYINASFIEAYDNTES 419
+ + A+ EN+ KNR +++PYD +RV LS +YINA+++ Y + +
Sbjct: 54 KLIGISLPKYAAEIAENRGKNRYNNVLPYDISRVKLSVQTHSTDDYINANYMPGYHSKKD 113
Query: 420 FIITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
FI TQ P + +T+ DFWRM+ E + I+M LT+ E+ +
Sbjct: 114 FIATQGP-LPNTLKDFWRMVWEKNVYAIVM----LTKCVEQGR 151
Score = 111 bits (280), Expect = 3e-27
Identities = 34/100 (34%), Positives = 56/100 (56%), Gaps = 3/100 (3%)
Query: 456 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD-YSNYINASFIEAYDNTES 514
+ + A+ EN+ KNR +++PYD +RV LS +YINA+++ Y + +
Sbjct: 54 KLIGISLPKYAAEIAENRGKNRYNNVLPYDISRVKLSVQTHSTDDYINANYMPGYHSKKD 113
Query: 515 FIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK 554
FI TQ P + +T+ DFWRM+ E + I+ML+ E +
Sbjct: 114 FIATQGP-LPNTLKDFWRMVWEKNVYAIVMLTK-CVEQGR 151
>2pa5_A Tyrosine-protein phosphatase non-receptor type 9; protein tyrosine
phosphatase, MEG2, PTPN9, structural genomi structural
genomics consortium, SGC; 1.60A {Homo sapiens}
Length = 314
Score = 305 bits (783), Expect = e-100
Identities = 78/241 (32%), Positives = 123/241 (51%), Gaps = 18/241 (7%)
Query: 30 PITRADIVME-YDERHYDSDYGFQQEFEQLVNEHFPDRSTKASEARENQHKNRYPDIKAY 88
P A + E D + G +E+E + E P + S + N KNRY D+
Sbjct: 6 PGPHAMTIQELVDYVNARQKQGIYEEYEDIRRE-NPVGTFHCSMSPGNLEKNRYGDVPCL 64
Query: 89 DQTRVKLTPVDGVPGSDYINANFVLGYKELKKFICAQGPMEHTVNDFWRMIWEQHLEIVI 148
DQTRVKLT G +DYINA+F+ GYK+ +I QGP+E+T DFW M+WEQ + +++
Sbjct: 65 DQTRVKLTKRSGHTQTDYINASFMDGYKQKNAYIGTQGPLENTYRDFWLMVWEQKVLVIV 124
Query: 149 MLTNLEEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKKFGEYILRELKLVRTASGKESE 208
M T EE + KC +YWP +++ +G V + + Y L++ T +E +
Sbjct: 125 MTTRFEEGGRRKCGQYWPLEKDSRIRFGFLTVTNLGVENMNHYKKTTLEIHNT---EERQ 181
Query: 209 ERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSL-------------EKGPILVHCR 255
+R + + +L+W D+ P + + L+ F++ V SL + PI+VHC
Sbjct: 182 KRQVTHFQFLSWPDYGVPSSAASLIDFLRVVRNQQSLAVSNMGARSKGQCPEPPIVVHCS 241
Query: 256 A 256
A
Sbjct: 242 A 242
Score = 113 bits (286), Expect = 4e-28
Identities = 31/104 (29%), Positives = 54/104 (51%), Gaps = 7/104 (6%)
Query: 361 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKDY--SNYINASFIEAYDNTE 418
+ + + + S N +KNR + D+ RV L+ + ++YINASF++ Y
Sbjct: 36 RRENPVGTFHCSMSPGNLEKNRYGDVPCLDQTRVKLTKRSGHTQTDYINASFMDGYKQKN 95
Query: 419 SFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
++I TQ P +E+T DFW M+ E + I+M T+ +E +
Sbjct: 96 AYIGTQGP-LENTYRDFWLMVWEQKVLVIVM----TTRFEEGGR 134
Score = 113 bits (284), Expect = 6e-28
Identities = 32/107 (29%), Positives = 55/107 (51%), Gaps = 7/107 (6%)
Query: 456 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKDY--SNYINASFIEAYDNTE 513
+ + + + S N +KNR + D+ RV L+ + ++YINASF++ Y
Sbjct: 36 RRENPVGTFHCSMSPGNLEKNRYGDVPCLDQTRVKLTKRSGHTQTDYINASFMDGYKQKN 95
Query: 514 SFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK---FRY 557
++I TQ P +E+T DFW M+ E + I+M + EE + +Y
Sbjct: 96 AYIGTQGP-LENTYRDFWLMVWEQKVLVIVMTTR-FEEGGRRKCGQY 140
>2p6x_A Tyrosine-protein phosphatase non-receptor type 22; tyrosine
phosphatase, lymphoid phosphatase, PEP, LYP, struct
genomics; 1.90A {Homo sapiens} PDB: 3h2x_A 3brh_A
2qct_A* 2qcj_A* 3olr_A* 3omh_A*
Length = 309
Score = 303 bits (777), Expect = 2e-99
Identities = 78/224 (34%), Positives = 111/224 (49%), Gaps = 10/224 (4%)
Query: 38 MEYDERHYDSDYGFQQEFEQLVNEHF-----PDRSTKASEARENQHKNRYPDIKAYDQTR 92
++ + + F EF +L + T +E +N KNRY DI YD +R
Sbjct: 11 LDEAQSKKITKEEFANEFLKLKRQSTKYKADKTYPTTVAEKPKNIKKNRYKDILPYDYSR 70
Query: 93 VKLTPVDGVPGSDYINANFVLGYKELKKFICAQGPMEHTVNDFWRMIWEQHLEIVIMLTN 152
V+L+ + S YINANF+ G K +I QGP+ T+ DFWRMIWE + I++M
Sbjct: 71 VELSLITSDEDSSYINANFIKGVYGPKAYIATQGPLSTTLLDFWRMIWEYSVLIIVMACM 130
Query: 153 LEEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKKFGEYILRELKLVRTASGKESEERSI 212
E K KC +YW E E +G F V EK+ +YI+R LK+ SE R+I
Sbjct: 131 EYEMGKKKCERYWAEPGEMQLEFGPFSVSCEAEKRKSDYIIRTLKVKFN-----SETRTI 185
Query: 213 FQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKGPILVHCRA 256
+Q+HY W D P + +L+ I V + PI +HC A
Sbjct: 186 YQFHYKNWPDHDVPSSIDPILELIWDVRCYQEDDSVPICIHCSA 229
Score = 111 bits (279), Expect = 3e-27
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 7/102 (6%)
Query: 363 KEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTESF 420
++ TT A+ +N KNR + I+PYD +RV LS S+YINA+FI+ +++
Sbjct: 40 ADKTYPTTVAEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSSYINANFIKGVYGPKAY 99
Query: 421 IITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
I TQ P + T+ DFWRMI E+++ I+M E K
Sbjct: 100 IATQGP-LSTTLLDFWRMIWEYSVLIIVM----ACMEYEMGK 136
Score = 110 bits (278), Expect = 4e-27
Identities = 38/99 (38%), Positives = 57/99 (57%), Gaps = 4/99 (4%)
Query: 458 KEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTESF 515
++ TT A+ +N KNR + I+PYD +RV LS S+YINA+FI+ +++
Sbjct: 40 ADKTYPTTVAEKPKNIKKNRYKDILPYDYSRVELSLITSDEDSSYINANFIKGVYGPKAY 99
Query: 516 IITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK 554
I TQ P + T+ DFWRMI E+++ I+M E K
Sbjct: 100 IATQGP-LSTTLLDFWRMIWEYSVLIIVMACM-EYEMGK 136
>2bzl_A Tyrosine-protein phosphatase, non-receptor type 14; PTPN14,
hydrolase; 1.65A {Homo sapiens}
Length = 325
Score = 288 bits (740), Expect = 8e-94
Identities = 60/255 (23%), Positives = 105/255 (41%), Gaps = 21/255 (8%)
Query: 16 RSHIPVASNPPDMAPITRADIVMEYDERHYDSDYGFQQEFEQLVNEHFPDRSTKASEARE 75
+ + D + + ++ + E+EQ+ + + + E
Sbjct: 14 GTENLYFQSMVDATRVPMDERFRTLKKKL--EEGMVFTEYEQIPKK-KANGIFSTAALPE 70
Query: 76 NQHKNRYPDIKAYDQTRVKLTPVDGVPGSDYINANFVLGY--KELKKFICAQGPMEHTVN 133
N ++R ++ Y++ RV+L P + YINA+ + +I QGP+ HT +
Sbjct: 71 NAERSRIREVVPYEENRVELIPTKE-NNTGYINASHIKVVVGGAEWHYIATQGPLPHTCH 129
Query: 134 DFWRMIWEQHLEIVIMLTNLEEYSKIKCAKYWPEQEEGDK--TYGDFIVGLVNEKKFGEY 191
DFW+M+WEQ + ++ M+T EE + K +YWP+ TYG F V Y
Sbjct: 130 DFWQMVWEQGVNVIAMVTAEEEGGRTKSHRYWPKLGSKHSSATYGKFKVTTKFRTDSVCY 189
Query: 192 ILRELKLVRTASGKESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSL------ 245
LK+ +ER+++ Y W D PE+ G L +++ +
Sbjct: 190 ATTGLKVKHL---LSGQERTVWHLQYTDWPDHGCPEDVQGFLSYLEEIQSVRRHTNSMLE 246
Query: 246 ----EKGPILVHCRA 256
PI+VHC A
Sbjct: 247 GTKNRHPPIVVHCSA 261
Score = 111 bits (280), Expect = 2e-27
Identities = 42/169 (24%), Positives = 69/169 (40%), Gaps = 24/169 (14%)
Query: 361 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD-YSNYINASFIEAYDNTE- 418
K+ N + A EN +++R ++PY+ NRV L P K+ + YINAS I+
Sbjct: 55 PKKKANGIFSTAALPENAERSRIREVVPYEENRVELIPTKENNTGYINASHIKVVVGGAE 114
Query: 419 -SFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENKSTTNAKSEENK---- 473
+I TQ P + HT HDFW+M+ E ++ I M +T +E + K
Sbjct: 115 WHYIATQGP-LPHTCHDFWQMVWEQGVNVIAM----VTAEEEGGR---------TKSHRY 160
Query: 474 --DKNRDESIIPYDRNRVILSPAKDYSNYINASF-IEAYDNTESFIITQ 519
S Y + +V D Y ++ + + +
Sbjct: 161 WPKLGSKHSSATYGKFKVTTKFRTDSVCYATTGLKVKHLLSGQERTVWH 209
Score = 111 bits (279), Expect = 4e-27
Identities = 38/108 (35%), Positives = 58/108 (53%), Gaps = 8/108 (7%)
Query: 456 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD-YSNYINASFIEAYDNTE- 513
K+ N + A EN +++R ++PY+ NRV L P K+ + YINAS I+
Sbjct: 55 PKKKANGIFSTAALPENAERSRIREVVPYEENRVELIPTKENNTGYINASHIKVVVGGAE 114
Query: 514 -SFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK---FRY 557
+I TQ P + HT HDFW+M+ E ++ I M++ EE + RY
Sbjct: 115 WHYIATQGP-LPHTCHDFWQMVWEQGVNVIAMVTA-EEEGGRTKSHRY 160
>3b7o_A Tyrosine-protein phosphatase non-receptor type 11; SHP2, PTPN11,
tyrosine phosphatase, structural genomics, STR genomics
consortium, SGC, deafness; 1.60A {Homo sapiens} PDB:
3jrl_A* 3mow_A* 3o5x_A*
Length = 316
Score = 287 bits (737), Expect = 2e-93
Identities = 88/241 (36%), Positives = 125/241 (51%), Gaps = 15/241 (6%)
Query: 28 MAPITRADIVMEYDERHYDSDYGFQQEFEQL-VNEHFPDRSTKASEARENQHKNRYPDIK 86
+ T E GF +EFE L E S K + +EN++KNRY +I
Sbjct: 11 VDLGTENLYFQSMAETTDKVKQGFWEEFETLQQQECKLLYSRKEGQRQENKNKNRYKNIL 70
Query: 87 AYDQTRVKLTPVD-GVPGSDYINANFVL--------GYKELKKFICAQGPMEHTVNDFWR 137
+D TRV L D P SDYINAN ++ K K +I QG +++TVNDFWR
Sbjct: 71 PFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKCNNSKPKKSYIATQGCLQNTVNDFWR 130
Query: 138 MIWEQHLEIVIMLTNLEEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKKFGEYILRELK 197
M+++++ +++M T E K KC KYWP+ E K YG V V E +Y LRELK
Sbjct: 131 MVFQENSRVIVMTTKEVERGKSKCVKYWPD-EYALKEYGVMRVRNVKESAAHDYTLRELK 189
Query: 198 LVRTASGKESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSL--EKGPILVHCR 255
L + G R+++QYH+ W D P +P G+L F++ V+ + GP++VHC
Sbjct: 190 LSKVGQGNTE--RTVWQYHFRTWPDHGVPSDPGGVLDFLEEVHHKQESIMDAGPVVVHCS 247
Query: 256 A 256
A
Sbjct: 248 A 248
Score = 100 bits (251), Expect = 2e-23
Identities = 36/113 (31%), Positives = 57/113 (50%), Gaps = 16/113 (14%)
Query: 361 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAK---DYSNYINASFIEA---- 413
Q + S + +ENK+KNR ++I+P+D RV+L S+YINA+ I
Sbjct: 44 QECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFET 103
Query: 414 ----YDNTESFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
+S+I TQ +++TV+DFWRM+ + I+M T+ E K
Sbjct: 104 KCNNSKPKKSYIATQGC-LQNTVNDFWRMVFQENSRVIVM----TTKEVERGK 151
Score = 99.7 bits (249), Expect = 2e-23
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 13/110 (11%)
Query: 456 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAK---DYSNYINASFIEA---- 508
Q + S + +ENK+KNR ++I+P+D RV+L S+YINA+ I
Sbjct: 44 QECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFET 103
Query: 509 ----YDNTESFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK 554
+S+I TQ +++TV+DFWRM+ + I+M + E K
Sbjct: 104 KCNNSKPKKSYIATQGC-LQNTVNDFWRMVFQENSRVIVMTT-KEVERGK 151
>2i75_A Tyrosine-protein phosphatase non-receptor type 4; PTPN4, PTP,
tyrosine phosphatase, MEG-1, structural genomics
structural genomics consortium, SGC; 2.45A {Homo
sapiens}
Length = 320
Score = 286 bits (735), Expect = 4e-93
Identities = 76/244 (31%), Positives = 117/244 (47%), Gaps = 14/244 (5%)
Query: 17 SHIPVASNPPDMAPITRADIVMEYDERHYDSDYGFQQEFEQLVNEHFPDRSTKASEAREN 76
+IP + + + +F+QL P + ++ +N
Sbjct: 13 QYIPEKAPLDSVHQDDHSLRESMIQLAEGLITGTVLTQFDQL-YRKKPGMTMSCAKLPQN 71
Query: 77 QHKNRYPDIKAYDQTRVKLTPVDGVPGSDYINANFV----LGYKELKKFICAQGPMEHTV 132
KNRY DI YD TRV L DYINAN++ + ++I QGP+ HT
Sbjct: 72 ISKNRYRDISPYDATRVILKG-----NEDYINANYINMEIPSSSIINQYIACQGPLPHTC 126
Query: 133 NDFWRMIWEQHLEIVIMLTNLEEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKKFGEYI 192
DFW+M WEQ +V+MLT E ++KC +YWPE G +YG + V +E+ YI
Sbjct: 127 TDFWQMTWEQGSSMVVMLTTQVERGRVKCHQYWPE-PTGSSSYGCYQVTCHSEEGNTAYI 185
Query: 193 LRELKLVRTASGKESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKGPILV 252
R++ L +++E R + Q Y+AW D P++ S L F+ HV + ++ P++V
Sbjct: 186 FRKMTLFNQ---EKNESRPLTQIQYIAWPDHGVPDDSSDFLDFVCHVRNKRAGKEEPVVV 242
Query: 253 HCRA 256
HC A
Sbjct: 243 HCSA 246
Score = 107 bits (268), Expect = 8e-26
Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 12/106 (11%)
Query: 361 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKDYSNYINASFIEA----YDN 416
K+ + + AK +N KNR I PYD RVIL +D YINA++I
Sbjct: 55 YRKKPGMTMSCAKLPQNISKNRYRDISPYDATRVILKGNED---YINANYINMEIPSSSI 111
Query: 417 TESFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
+I Q P + HT DFW+M E S ++M LT E +
Sbjct: 112 INQYIACQGP-LPHTCTDFWQMTWEQGSSMVVM----LTTQVERGR 152
Score = 107 bits (268), Expect = 8e-26
Identities = 36/109 (33%), Positives = 51/109 (46%), Gaps = 12/109 (11%)
Query: 456 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKDYSNYINASFIEA----YDN 511
K+ + + AK +N KNR I PYD RVIL +D YINA++I
Sbjct: 55 YRKKPGMTMSCAKLPQNISKNRYRDISPYDATRVILKGNED---YINANYINMEIPSSSI 111
Query: 512 TESFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK---FRY 557
+I Q P + HT DFW+M E S ++ML+ E + +Y
Sbjct: 112 INQYIACQGP-LPHTCTDFWQMTWEQGSSMVVMLTT-QVERGRVKCHQY 158
>1zc0_A Tyrosine-protein phosphatase, non-receptor type 7; heptp, human
tyrosine phosphatase catalytic domain, LC-PTP,
hydrolase; 1.85A {Homo sapiens} PDB: 2gp0_A 2qdc_A
2hvl_A 2qdp_A 2qdm_A 3o4s_A 3o4t_A* 3o4u_A* 3d44_A*
3d42_A* 2a3k_A
Length = 309
Score = 286 bits (734), Expect = 5e-93
Identities = 78/246 (31%), Positives = 121/246 (49%), Gaps = 17/246 (6%)
Query: 16 RSHIPVASNPPDMAPITRA--DIVMEYDERHYDSDYGFQQEFEQLVNEHFPDRSTKASEA 73
H + + A + +R S ++EF ++ + S + +
Sbjct: 9 HHHHMNTPREVTLHFLRTAGHPLTRWALQRQPPSPKQLEEEFLKIPSNFV---SPEDLDI 65
Query: 74 RENQHKNRYPDIKAYDQTRVKLTPVDGVPGSDYINANFVLGYKELKK-FICAQGPMEHTV 132
+ K+RY I Q+RV L DYINAN++ GY +K +I QGPM +TV
Sbjct: 66 PGHASKDRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQGPMPNTV 125
Query: 133 NDFWRMIWEQHLEIVIMLTNLEEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKKFGEYI 192
+DFW M+W++ + +++MLT L E K KC YWP +EE TYG F + + + K+ EY
Sbjct: 126 SDFWEMVWQEEVSLIVMLTQLRE-GKEKCVHYWPTEEE---TYGPFQIRIQDMKECPEYT 181
Query: 193 LRELKLVRTASGKESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAY--SLEKGPI 250
+R+L + E RS+ + AW D Q PE+ LL+ + V E+ + GPI
Sbjct: 182 VRQLTIQYQ-----EERRSVKHILFSAWPDHQTPESAGPLLRLVAEVEESPETAAHPGPI 236
Query: 251 LVHCRA 256
+VHC A
Sbjct: 237 VVHCSA 242
Score = 102 bits (256), Expect = 3e-24
Identities = 33/92 (35%), Positives = 53/92 (57%), Gaps = 5/92 (5%)
Query: 463 STTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDN-TESFIITQ 519
S + + K+R ++I+P ++RV L A+ +YINA++I YD + +I TQ
Sbjct: 59 SPEDLDIPGHASKDRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQ 118
Query: 520 DPDMEHTVHDFWRMISEHTISTIIMLSDGLEE 551
P M +TV DFW M+ + +S I+ML+ L E
Sbjct: 119 GP-MPNTVSDFWEMVWQEEVSLIVMLTQ-LRE 148
Score = 102 bits (255), Expect = 4e-24
Identities = 31/86 (36%), Positives = 50/86 (58%), Gaps = 4/86 (4%)
Query: 368 STTNAKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDN-TESFIITQ 424
S + + K+R ++I+P ++RV L A+ +YINA++I YD + +I TQ
Sbjct: 59 SPEDLDIPGHASKDRYKTILPNPQSRVCLGRAQSQEDGDYINANYIRGYDGKEKVYIATQ 118
Query: 425 DPDMEHTVHDFWRMISEHTISTIIML 450
P M +TV DFW M+ + +S I+ML
Sbjct: 119 GP-MPNTVSDFWEMVWQEEVSLIVML 143
>2cm2_A Tyrosine-protein phosphatase non-receptor type 1; polymorphism,
phosphorylation, endoplasmic reticulum, oxidation,
hydrolase, acetylation; 1.5A {Homo sapiens} SCOP:
c.45.1.2 PDB: 2cm3_A 2cmb_A* 2cmc_A* 2cne_A* 3a5j_A
2cma_A 3a5k_A 3eu0_A 3sme_A 2azr_A* 2b07_A* 2h4g_A*
2h4k_A* 2hb1_A* 2qbp_A* 2qbq_A* 2qbr_A* 2qbs_A* 2zmm_A*
2zn7_A* ...
Length = 304
Score = 283 bits (727), Expect = 3e-92
Identities = 72/223 (32%), Positives = 119/223 (53%), Gaps = 12/223 (5%)
Query: 38 MEYDERHYDSDYGFQQEFEQLVNEHFPDRSTKASEARENQHKNRYPDIKAYDQTRVKLTP 97
ME + D + ++ + +E D + ++ +N+++NRY D+ +D +R+KL
Sbjct: 9 MEKEFEQIDKSGSWAAIYQDIRHE-ASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ 67
Query: 98 VDGVPGSDYINANFVLGYKELKKFICAQGPMEHTVNDFWRMIWEQHLEIVIMLTNLEEYS 157
+DYINA+ + + + +I QGP+ +T FW M+WEQ V+ML + E
Sbjct: 68 ----EDNDYINASLIKMEEAQRSYILTQGPLPNTCGHFWEMVWEQKSRGVVMLNRVMEKG 123
Query: 158 KIKCAKYWPEQEEGDKT--YGDFIVGLVNEKKFGEYILRELKLVRTASGKESEERSIFQY 215
+KCA+YWP++EE + + + L++E Y +R+L+L E R I +
Sbjct: 124 SLKCAQYWPQKEEKEMIFEDTNLKLTLISEDIKSYYTVRQLELENL---TTQETREILHF 180
Query: 216 HYLAWKDFQAPENPSGLLKFIKHVNEAYSL--EKGPILVHCRA 256
HY W DF PE+P+ L F+ V E+ SL E GP++VHC A
Sbjct: 181 HYTTWPDFGVPESPASFLNFLFKVRESGSLSPEHGPVVVHCSA 223
Score = 110 bits (277), Expect = 5e-27
Identities = 29/102 (28%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 361 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKDYSNYINASFIEAYDNTESF 420
+ + + AK +NK++NR + P+D +R+ L + ++YINAS I+ + S+
Sbjct: 30 RHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ--EDNDYINASLIKMEEAQRSY 87
Query: 421 IITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
I+TQ P + +T FW M+ E ++M L + E+
Sbjct: 88 ILTQGP-LPNTCGHFWEMVWEQKSRGVVM----LNRVMEKGS 124
Score = 110 bits (276), Expect = 6e-27
Identities = 30/105 (28%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 456 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKDYSNYINASFIEAYDNTESF 515
+ + + AK +NK++NR + P+D +R+ L + ++YINAS I+ + S+
Sbjct: 30 RHEASDFPCRVAKLPKNKNRNRYRDVSPFDHSRIKLHQ--EDNDYINASLIKMEEAQRSY 87
Query: 516 IITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK---FRY 557
I+TQ P + +T FW M+ E ++ML+ + E +Y
Sbjct: 88 ILTQGP-LPNTCGHFWEMVWEQKSRGVVMLNR-VMEKGSLKCAQY 130
>2b49_A Protein tyrosine phosphatase, non-receptor type 3; human, STRU
genomics, structural genomics consortium, SGC,
hydrolase; 1.54A {Homo sapiens}
Length = 287
Score = 282 bits (723), Expect = 8e-92
Identities = 69/218 (31%), Positives = 111/218 (50%), Gaps = 15/218 (6%)
Query: 43 RHYDSDYGFQQEFEQLVNEHFPDRSTKASEARENQHKNRYPDIKAYDQTRVKLTPVDGVP 102
+ +FEQL P + ++ +N KNRY D+ YD TRV L
Sbjct: 12 KKGLESGTVLIQFEQL-YRKKPGLAITFAKLPQNLDKNRYKDVLPYDTTRVLLQG----- 65
Query: 103 GSDYINANFV----LGYKELKKFICAQGPMEHTVNDFWRMIWEQHLEIVIMLTNLEEYSK 158
DYINA++V + K+I QGP+ HT FW+++W+Q L +++MLT L E +
Sbjct: 66 NEDYINASYVNMEIPAANLVNKYIATQGPLPHTCAQFWQVVWDQKLSLIVMLTTLTERGR 125
Query: 159 IKCAKYWPEQEEGDKTYGDFIVGLVNEKKFGEYILRELKLVRTASGKESEERSIFQYHYL 218
KC +YWP+ + +G F + +E Y+ RE+ + T + EE ++ Y+
Sbjct: 126 TKCHQYWPDPPD-VMNHGGFHIQCQSEDCTIAYVSREMLVTNT---QTGEEHTVTHLQYV 181
Query: 219 AWKDFQAPENPSGLLKFIKHVNEAYSLEKGPILVHCRA 256
AW D P++ S L+F+ +V + ++ P+LVHC A
Sbjct: 182 AWPDHGVPDDSSDFLEFVNYVR-SLRVDSEPVLVHCSA 218
Score = 108 bits (273), Expect = 1e-26
Identities = 35/106 (33%), Positives = 55/106 (51%), Gaps = 12/106 (11%)
Query: 361 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKDYSNYINASFIEA----YDN 416
K+ + T AK +N DKNR + ++PYD RV+L +D YINAS++ +
Sbjct: 28 YRKKPGLAITFAKLPQNLDKNRYKDVLPYDTTRVLLQGNED---YINASYVNMEIPAANL 84
Query: 417 TESFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
+I TQ P + HT FW+++ + +S I+M LT E +
Sbjct: 85 VNKYIATQGP-LPHTCAQFWQVVWDQKLSLIVM----LTTLTERGR 125
Score = 108 bits (272), Expect = 1e-26
Identities = 36/109 (33%), Positives = 58/109 (53%), Gaps = 12/109 (11%)
Query: 456 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKDYSNYINASFIEA----YDN 511
K+ + T AK +N DKNR + ++PYD RV+L +D YINAS++ +
Sbjct: 28 YRKKPGLAITFAKLPQNLDKNRYKDVLPYDTTRVLLQGNED---YINASYVNMEIPAANL 84
Query: 512 TESFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK---FRY 557
+I TQ P + HT FW+++ + +S I+ML+ L E + +Y
Sbjct: 85 VNKYIATQGP-LPHTCAQFWQVVWDQKLSLIVMLTT-LTERGRTKCHQY 131
>1jln_A STEP-like ptpase, protein tyrosine phosphatase, receptor type, R;
PTP-SL, PTPBR7, ERK2-MAP kinase regulation, hydrolase;
1.81A {Mus musculus} SCOP: c.45.1.2 PDB: 2a8b_A
Length = 297
Score = 282 bits (724), Expect = 9e-92
Identities = 72/241 (29%), Positives = 112/241 (46%), Gaps = 16/241 (6%)
Query: 20 PVASNPPDMAPITRADIVMEYDERHYDSDYGFQQEFEQLVNEHFPDRSTKASEARENQHK 79
P + + S + Q EF ++ K + + K
Sbjct: 3 PREKVAMEYLQSASRVLTRSQLRDVVASSHLLQSEFMEIPMNFV---DPKEIDIPRHGTK 59
Query: 80 NRYPDIKAYDQTRVKLTPVDG-VPGSDYINANFVLGYKELKK-FICAQGPMEHTVNDFWR 137
NRY I +RV L P + S YINAN++ GY +K FI QGPM +TVNDFW+
Sbjct: 60 NRYKTILPNPLSRVCLRPKNITDSLSTYINANYIRGYSGKEKAFIATQGPMINTVNDFWQ 119
Query: 138 MIWEQHLEIVIMLTNLEEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKKFGEYILRELK 197
M+W++ +++M+T L+E ++ KC YWPE+ YG V + + Y +R L
Sbjct: 120 MVWQEDSPVIVMITKLKEKNE-KCVLYWPEKRG---IYGKVEVLVTGVTECDNYTIRNLV 175
Query: 198 LVRTASGKESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNE--AYSLEKGPILVHCR 255
L + S + + Y Y +W D + P++ LL+ + V E S +GP++VHC
Sbjct: 176 LKQG-----SHTQHVKHYWYTSWPDHKTPDSAQPLLQLMLDVEEDRLASEGRGPVVVHCS 230
Query: 256 A 256
A
Sbjct: 231 A 231
Score = 106 bits (266), Expect = 1e-25
Identities = 35/104 (33%), Positives = 53/104 (50%), Gaps = 9/104 (8%)
Query: 363 KEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD---YSNYINASFIEAYDNTE- 418
+ KNR ++I+P +RV L P S YINA++I Y E
Sbjct: 42 PMNFVDPKEIDIPRHGTKNRYKTILPNPLSRVCLRPKNITDSLSTYINANYIRGYSGKEK 101
Query: 419 SFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
+FI TQ P M +TV+DFW+M+ + I+M +T+ KE+N+
Sbjct: 102 AFIATQGP-MINTVNDFWQMVWQEDSPVIVM----ITKLKEKNE 140
Score = 105 bits (265), Expect = 1e-25
Identities = 35/106 (33%), Positives = 53/106 (50%), Gaps = 8/106 (7%)
Query: 458 KEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKD---YSNYINASFIEAYDNTE- 513
+ KNR ++I+P +RV L P S YINA++I Y E
Sbjct: 42 PMNFVDPKEIDIPRHGTKNRYKTILPNPLSRVCLRPKNITDSLSTYINANYIRGYSGKEK 101
Query: 514 SFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK--FRY 557
+FI TQ P M +TV+DFW+M+ + I+M++ L+E N+ Y
Sbjct: 102 AFIATQGP-MINTVNDFWQMVWQEDSPVIVMITK-LKEKNEKCVLY 145
>1fpr_A Protein-tyrosine phosphatase 1C; protein tyrosine phosphatase,
substrate specificity, residue shift, signaling protein;
HET: PTR; 2.50A {Homo sapiens} SCOP: c.45.1.2 PDB:
1gwz_A
Length = 284
Score = 281 bits (721), Expect = 2e-91
Identities = 78/216 (36%), Positives = 111/216 (51%), Gaps = 12/216 (5%)
Query: 50 GFQQEFEQLVNEHF-PDRSTKASEARENQHKNRYPDIKAYDQTRVKLTPVDG-VPGSDYI 107
GF +EFE L + + EN+ KNRY +I +D +RV L D +PGSDYI
Sbjct: 1 GFWEEFESLQKQEVKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYI 60
Query: 108 NANFVLGYKEL-----KKFICAQGPMEHTVNDFWRMIWEQHLEIVIMLTNLEEYSKIKCA 162
NAN++ K +I +QG +E TVNDFW+M W+++ +++M T E + KC
Sbjct: 61 NANYIKNQLLGPDENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCV 120
Query: 163 KYWPEQEEGDKTYGDFIVGLVNEKKFGEYILRELKLVRTASGKESEERSIFQYHYLAWKD 222
YWPE + YG + V E EY LR L++ +G R I+ Y YL+W D
Sbjct: 121 PYWPEVGM-QRAYGPYSVTNCGEHDTTEYKLRTLQVSPLDNGDLI--REIWHYQYLSWPD 177
Query: 223 FQAPENPSGLLKFIKHVNEAYSL--EKGPILVHCRA 256
P P G+L F+ +N+ GPI+VH A
Sbjct: 178 HGVPSEPGGVLSFLDQINQRQESLPHAGPIIVHSSA 213
Score = 103 bits (259), Expect = 7e-25
Identities = 32/103 (31%), Positives = 53/103 (51%), Gaps = 13/103 (12%)
Query: 368 STTNAKSEENKDKNRDESIIPYDRNRVILSPAKD---YSNYINASFIEAYDNTE-----S 419
+ ENK KNR ++I+P+D +RVIL S+YINA++I+ +
Sbjct: 19 QRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKT 78
Query: 420 FIITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
+I +Q +E TV+DFW+M + I+M T+ E+ +
Sbjct: 79 YIASQGC-LEATVNDFWQMAWQENSRVIVM----TTREVEKGR 116
Score = 102 bits (257), Expect = 1e-24
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 13/106 (12%)
Query: 463 STTNAKSEENKDKNRDESIIPYDRNRVILSPAKD---YSNYINASFIEAYDNTE-----S 514
+ ENK KNR ++I+P+D +RVIL S+YINA++I+ +
Sbjct: 19 QRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKT 78
Query: 515 FIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK---FRY 557
+I +Q +E TV+DFW+M + I+M + E + Y
Sbjct: 79 YIASQGC-LEATVNDFWQMAWQENSRVIVMTTR-EVEKGRNKCVPY 122
>1p15_A Protein-tyrosine phosphatase alpha; transmembrane, hydrolase,
phosphorylation; 2.00A {Mus musculus} SCOP: c.45.1.2
Length = 253
Score = 279 bits (717), Expect = 2e-91
Identities = 69/189 (36%), Positives = 103/189 (54%), Gaps = 6/189 (3%)
Query: 69 KASEARENQHKNRYPDIKAYDQTRVKLTPVDGVPGSDYINANFVLGYKELKKFICAQGPM 128
+ N KNR I Y+ RV + G +DY+NA+F+ GY++ +I +QGP+
Sbjct: 2 RTGNLPANMKKNRVLQIIPYEFNRVIIPVKRGEENTDYVNASFIDGYRQKDSYIASQGPL 61
Query: 129 EHTVNDFWRMIWEQHLEIVIMLTNLEEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKKF 188
HT+ DFWRMIWE ++MLT LEE + KCA+YWP +G +YGD V L E++
Sbjct: 62 LHTIEDFWRMIWEWKSCSIVMLTELEERGQEKCAQYWP--SDGLVSYGDITVELKKEEEC 119
Query: 189 GEYILRELKLVRTASGKESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLE-K 247
Y +R+L + T +E++ R I Q+H+ W + P + G++ I V +
Sbjct: 120 ESYTVRDLLVTNT---RENKSRQIRQFHFHGWPEVGIPSDGKGMINIIAAVQKQQQQSGN 176
Query: 248 GPILVHCRA 256
PI VHC A
Sbjct: 177 HPITVHCSA 185
Score = 111 bits (279), Expect = 9e-28
Identities = 37/93 (39%), Positives = 54/93 (58%), Gaps = 7/93 (7%)
Query: 372 AKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTESFIITQDPDME 429
N KNR IIPY+ NRVI+ + ++Y+NASFI+ Y +S+I +Q P +
Sbjct: 4 GNLPANMKKNRVLQIIPYEFNRVIIPVKRGEENTDYVNASFIDGYRQKDSYIASQGP-LL 62
Query: 430 HTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
HT+ DFWRMI E +I+M LT+ +E +
Sbjct: 63 HTIEDFWRMIWEWKSCSIVM----LTELEERGQ 91
Score = 110 bits (277), Expect = 1e-27
Identities = 38/90 (42%), Positives = 55/90 (61%), Gaps = 4/90 (4%)
Query: 467 AKSEENKDKNRDESIIPYDRNRVILSPAKD--YSNYINASFIEAYDNTESFIITQDPDME 524
N KNR IIPY+ NRVI+ + ++Y+NASFI+ Y +S+I +Q P +
Sbjct: 4 GNLPANMKKNRVLQIIPYEFNRVIIPVKRGEENTDYVNASFIDGYRQKDSYIASQGP-LL 62
Query: 525 HTVHDFWRMISEHTISTIIMLSDGLEETNK 554
HT+ DFWRMI E +I+ML++ LEE +
Sbjct: 63 HTIEDFWRMIWEWKSCSIVMLTE-LEERGQ 91
>1l8k_A T-cell protein-tyrosine phosphatase; hydrolase; 2.56A {Homo
sapiens} SCOP: c.45.1.2
Length = 314
Score = 282 bits (723), Expect = 2e-91
Identities = 74/222 (33%), Positives = 119/222 (53%), Gaps = 11/222 (4%)
Query: 38 MEYDERHYDSDYGFQQEFEQLVNEHFPDRSTKASEARENQHKNRYPDIKAYDQTRVKLTP 97
+E + D+ +Q + ++ NE D + ++ EN+++NRY D+ YD +RVKL
Sbjct: 5 IEREFEELDTQRRWQPLYLEIRNE-SHDYPHRVAKFPENRNRNRYRDVSPYDHSRVKLQN 63
Query: 98 VDGVPGSDYINANFVLGYKELKKFICAQGPMEHTVNDFWRMIWEQHLEIVIMLTNLEEYS 157
+ +DYINA+ V + + +I QGP+ +T FW M+W+Q + V+ML + E
Sbjct: 64 AE----NDYINASLVDIEEAQRSYILTQGPLPNTCCHFWLMVWQQKTKAVVMLNRIVEKE 119
Query: 158 KIKCAKYWP-EQEEGDKTYGDFIVGLVNEKKFGEYILRELKLVRTASGKESEERSIFQYH 216
+KCA+YWP + +E F V L++E Y + L+L E R+I +H
Sbjct: 120 SVKCAQYWPTDDQEMLFKETGFSVKLLSEDVKSYYTVHLLQLENI---NSGETRTISHFH 176
Query: 217 YLAWKDFQAPENPSGLLKFIKHVNEAYSL--EKGPILVHCRA 256
Y W DF PE+P+ L F+ V E+ SL + GP ++HC A
Sbjct: 177 YTTWPDFGVPESPASFLNFLFKVRESGSLNPDHGPAVIHCSA 218
Score = 109 bits (275), Expect = 1e-26
Identities = 30/102 (29%), Positives = 53/102 (51%), Gaps = 7/102 (6%)
Query: 361 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKDYSNYINASFIEAYDNTESF 420
+ + + AK EN+++NR + PYD +RV L A ++YINAS ++ + S+
Sbjct: 26 RNESHDYPHRVAKFPENRNRNRYRDVSPYDHSRVKLQNA--ENDYINASLVDIEEAQRSY 83
Query: 421 IITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
I+TQ P + +T FW M+ + ++M L + E+
Sbjct: 84 ILTQGP-LPNTCCHFWLMVWQQKTKAVVM----LNRIVEKES 120
Score = 108 bits (273), Expect = 1e-26
Identities = 31/105 (29%), Positives = 55/105 (52%), Gaps = 7/105 (6%)
Query: 456 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKDYSNYINASFIEAYDNTESF 515
+ + + AK EN+++NR + PYD +RV L A ++YINAS ++ + S+
Sbjct: 26 RNESHDYPHRVAKFPENRNRNRYRDVSPYDHSRVKLQNA--ENDYINASLVDIEEAQRSY 83
Query: 516 IITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK---FRY 557
I+TQ P + +T FW M+ + ++ML+ + E +Y
Sbjct: 84 ILTQGP-LPNTCCHFWLMVWQQKTKAVVMLNR-IVEKESVKCAQY 126
Score = 27.6 bits (62), Expect = 9.6
Identities = 7/49 (14%), Positives = 20/49 (40%), Gaps = 3/49 (6%)
Query: 250 ILVHCRALVEVVQF--GETEIRATDLKSTLETLKRVNDGNKKSELELEF 296
+ A++E + G++ I+ + + E L D + + ++
Sbjct: 266 RFSY-MAIIEGAKCIKGDSSIQKRWKELSKEDLSPAFDHSPNKIMTEKY 313
>1wch_A Protein tyrosine phosphatase, non-receptor type 13; hydrolase,
phosphate ION, colorectal cancer alternative splicing,
coiled coil, cytoskeleton; 1.85A {Homo sapiens} SCOP:
c.45.1.2
Length = 315
Score = 279 bits (717), Expect = 2e-90
Identities = 74/238 (31%), Positives = 105/238 (44%), Gaps = 15/238 (6%)
Query: 23 SNPPDMAPITRADIVMEYDE-RHYDSDYGFQQEFEQLVNEHFPDRSTKASEARENQHKNR 81
T A++ R +E E L E P + +EN+ KNR
Sbjct: 22 VKVLPSGKYTGANLKSVIRVLRGLLDQGIPSKELENL-QELKPLDQCLIGQTKENRRKNR 80
Query: 82 YPDIKAYDQTRVKLTPVDGVPGSDYINANFVLG--YKELKKFICAQGPMEHTVNDFWRMI 139
Y +I YD TRV L YINA+F+ KE +I QGP+ TV DFW+MI
Sbjct: 81 YKNILPYDATRVPLGD-----EGGYINASFIKIPVGKEEFVYIACQGPLPTTVGDFWQMI 135
Query: 140 WEQHLEIVIMLTNLEEYSKIKCAKYWPEQ-EEGDKTYGDFIVGLVNEKKFGEYILRELKL 198
WEQ ++ M+T E KIKC +YWP + + LV ++ +++R + L
Sbjct: 136 WEQKSTVIAMMTQEVEGEKIKCQRYWPNILGKTTMVSNRLRLALVRMQQLKGFVVRAMTL 195
Query: 199 VRTASGKESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKGPILVHCRA 256
+ E R I ++ AW D P P LL FI ++ + GPI+ HC A
Sbjct: 196 EDI---QTREVRHISHLNFTAWPDHDTPSQPDDLLTFISYMRHIH--RSGPIITHCSA 248
Score = 106 bits (266), Expect = 2e-25
Identities = 37/104 (35%), Positives = 50/104 (48%), Gaps = 10/104 (9%)
Query: 361 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKDYSNYINASFI--EAYDNTE 418
Q + +++EN+ KNR ++I+PYD RV L YINASFI
Sbjct: 59 QELKPLDQCLIGQTKENRRKNRYKNILPYDATRVPLGDEGG---YINASFIKIPVGKEEF 115
Query: 419 SFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
+I Q P + TV DFW+MI E + I M +TQ E K
Sbjct: 116 VYIACQGP-LPTTVGDFWQMIWEQKSTVIAM----MTQEVEGEK 154
Score = 105 bits (265), Expect = 2e-25
Identities = 37/107 (34%), Positives = 51/107 (47%), Gaps = 10/107 (9%)
Query: 456 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKDYSNYINASFI--EAYDNTE 513
Q + +++EN+ KNR ++I+PYD RV L YINASFI
Sbjct: 59 QELKPLDQCLIGQTKENRRKNRYKNILPYDATRVPLGDEGG---YINASFIKIPVGKEEF 115
Query: 514 SFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK---FRY 557
+I Q P + TV DFW+MI E + I M++ E K RY
Sbjct: 116 VYIACQGP-LPTTVGDFWQMIWEQKSTVIAMMTQ-EVEGEKIKCQRY 160
>2cjz_A Human protein tyrosine phosphatase PTPN5; protein phosphatase,
STEP, hydrolase; HET: PTR; 1.70A {Homo sapiens} PDB:
2bij_A 2bv5_A*
Length = 305
Score = 274 bits (703), Expect = 2e-88
Identities = 72/220 (32%), Positives = 104/220 (47%), Gaps = 17/220 (7%)
Query: 42 ERHYDSDYGFQQEFEQLVNEHFPDRSTKASEARENQHKNRYPDIKAYDQTRVKLTPVDG- 100
+ Q EF ++ K + KNRY I +RV LT D
Sbjct: 33 HEKALDPFLLQAEFFEIPMNFV---DPKEYDIPGLVRKNRYKTILPNPHSRVCLTSPDPD 89
Query: 101 VPGSDYINANFVLGYK-ELKKFICAQGPMEHTVNDFWRMIWEQHLEIVIMLTNLEEYSKI 159
P S YINAN++ GY E K +I QGP+ TV DFWRM+W++H I++M+TN+EE
Sbjct: 90 DPLSSYINANYIRGYGGEEKVYIATQGPIVSTVADFWRMVWQEHTPIIVMITNIEE-MNE 148
Query: 160 KCAKYWPEQEEGDKTYGDFIVGLVNEKKFGEYILRELKLVRTASGKESEERSIFQYHYLA 219
KC +YWPE++ Y + + +Y LR + L +EER + Y + +
Sbjct: 149 KCTEYWPEEQV---AYDGVEITVQKVIHTEDYRLRLISLKSG-----TEERGLKHYWFTS 200
Query: 220 WKDFQAPENPSGLLKFIKHVNEAYSL---EKGPILVHCRA 256
W D + P+ LL ++ V EA PI+VH A
Sbjct: 201 WPDQKTPDRAPPLLHLVREVEEAAQQEGPHCAPIIVHSSA 240
Score = 104 bits (261), Expect = 6e-25
Identities = 33/101 (32%), Positives = 51/101 (50%), Gaps = 8/101 (7%)
Query: 463 STTNAKSEENKDKNRDESIIPYDRNRVILSPAK---DYSNYINASFIEAYDNTE-SFIIT 518
KNR ++I+P +RV L+ S+YINA++I Y E +I T
Sbjct: 55 DPKEYDIPGLVRKNRYKTILPNPHSRVCLTSPDPDDPLSSYINANYIRGYGGEEKVYIAT 114
Query: 519 QDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK--FRY 557
Q P + TV DFWRM+ + I+M+++ +EE N+ Y
Sbjct: 115 QGP-IVSTVADFWRMVWQEHTPIIVMITN-IEEMNEKCTEY 153
Score = 102 bits (257), Expect = 2e-24
Identities = 32/99 (32%), Positives = 48/99 (48%), Gaps = 9/99 (9%)
Query: 368 STTNAKSEENKDKNRDESIIPYDRNRVILSPAK---DYSNYINASFIEAYDNTE-SFIIT 423
KNR ++I+P +RV L+ S+YINA++I Y E +I T
Sbjct: 55 DPKEYDIPGLVRKNRYKTILPNPHSRVCLTSPDPDDPLSSYINANYIRGYGGEEKVYIAT 114
Query: 424 QDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
Q P + TV DFWRM+ + I+M +T +E N+
Sbjct: 115 QGP-IVSTVADFWRMVWQEHTPIIVM----ITNIEEMNE 148
Score = 34.6 bits (80), Expect = 0.071
Identities = 8/46 (17%), Positives = 13/46 (28%)
Query: 253 HCRALVEVVQFGETEIRATDLKSTLETLKRVNDGNKKSELELEFEE 298
H V G + + L+ + L+ EF E
Sbjct: 3 HHHHHSSGVDLGTENLYFQSMSRVLQAEELHEKALDPFLLQAEFFE 48
>2shp_A SHP-2, SYP, SHPTP-2; tyrosine phosphatase, insulin signaling, SH2
protein; HET: CAT; 2.00A {Homo sapiens} SCOP: c.45.1.2
d.93.1.1 d.93.1.1
Length = 525
Score = 279 bits (716), Expect = 1e-87
Identities = 93/266 (34%), Positives = 139/266 (52%), Gaps = 16/266 (6%)
Query: 4 RNSLRHICRTLRRSHIPVASNPPDMAPI-TRADIVMEYDERHYDSDYGFQQEFEQLVN-E 61
+N + T+ + P+ + + A I +R + + E GF +EFE L E
Sbjct: 199 KNPMVETLGTVLQLKQPLNTTRINAAEIESRVRELSKLAETTDKVKQGFWEEFETLQQQE 258
Query: 62 HFPDRSTKASEARENQHKNRYPDIKAYDQTRVKLTPVD-GVPGSDYINANFVL------- 113
S K + +EN++KNRY +I +D TRV L D P SDYINAN ++
Sbjct: 259 CKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFETKC 318
Query: 114 -GYKELKKFICAQGPMEHTVNDFWRMIWEQHLEIVIMLTNLEEYSKIKCAKYWPEQEEGD 172
K K +I QG +++TVNDFWRM+++++ +++M T E K KC KYWP+ E
Sbjct: 319 NNSKPKKSYIATQGCLQNTVNDFWRMVFQENSRVIVMTTKEVERGKSKCVKYWPD-EYAL 377
Query: 173 KTYGDFIVGLVNEKKFGEYILRELKLVRTASGKESEERSIFQYHYLAWKDFQAPENPSGL 232
K YG V V E +Y LRELKL + G R+++QYH+ W D P +P G+
Sbjct: 378 KEYGVMRVRNVKESAAHDYTLRELKLSKVGQGNTE--RTVWQYHFRTWPDHGVPSDPGGV 435
Query: 233 LKFIKHVNEAYSL--EKGPILVHCRA 256
L F++ V+ + GP++VHC A
Sbjct: 436 LDFLEEVHHKQESIMDAGPVVVHCSA 461
Score = 108 bits (270), Expect = 4e-25
Identities = 55/252 (21%), Positives = 96/252 (38%), Gaps = 47/252 (18%)
Query: 228 NPSGLLKFIKHV-----NEAYSLEKGPILVHCRALVEVVQFGETEIRATDLKSTLETLKR 282
+P + ++ + + +++ C+ L V GE TDL +E K+
Sbjct: 143 HPGDFVLSVRTGDDKGESNDGKSKVTHVMIRCQELKYDVGGGERFDSLTDL---VEHYKK 199
Query: 283 VNDGNKKSELELEFEETHNKCSDHLIRSACQFYLIHQVNLASGPDQVYVLRLTQAKEENK 342
N E + + ++N A +V L +
Sbjct: 200 ----NPMVETLGTVLQLKQPLNTT------------RINAAEIESRVRELSKLAETTDKV 243
Query: 343 STTNAKS-EDLTVLGVRLTQAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPA-- 399
+ E L +L S + +ENK+KNR ++I+P+D RV+L
Sbjct: 244 KQGFWEEFETLQQQECKLLY------SRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDP 297
Query: 400 -KDYSNYINASFI--------EAYDNTESFIITQDPDMEHTVHDFWRMISEHTISTIIML 450
+ S+YINA+ I +S+I TQ +++TV+DFWRM+ + I+M
Sbjct: 298 NEPVSDYINANIIMPEFETKCNNSKPKKSYIATQGC-LQNTVNDFWRMVFQENSRVIVM- 355
Query: 451 SDRLTQAKEENK 462
T+ E K
Sbjct: 356 ---TTKEVERGK 364
Score = 100 bits (250), Expect = 1e-22
Identities = 36/116 (31%), Positives = 59/116 (50%), Gaps = 16/116 (13%)
Query: 456 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPA---KDYSNYINASFI------ 506
Q + S + +ENK+KNR ++I+P+D RV+L + S+YINA+ I
Sbjct: 257 QECKLLYSRKEGQRQENKNKNRYKNILPFDHTRVVLHDGDPNEPVSDYINANIIMPEFET 316
Query: 507 --EAYDNTESFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK---FRY 557
+S+I TQ +++TV+DFWRM+ + I+M + E K +Y
Sbjct: 317 KCNNSKPKKSYIATQGC-LQNTVNDFWRMVFQENSRVIVMTTK-EVERGKSKCVKY 370
>3m4u_A Tyrosine specific protein phosphatase, putative; protein tyrosine
phosphatase, hydrolase; 2.39A {Trypanosoma brucei}
Length = 306
Score = 271 bits (694), Expect = 4e-87
Identities = 64/234 (27%), Positives = 97/234 (41%), Gaps = 14/234 (5%)
Query: 32 TRADIVMEYDERHYDSDYGFQQEFEQLVNEHFPDRSTKASEARENQHKNRYPDIKAYDQT 91
T M Q+EF QL R+ + + +N+HKNRY DI A ++T
Sbjct: 3 TAKSFPMAQLSTRAQYS-RMQREFVQL-QRQENPRNINFTTSLKNRHKNRYLDILANEET 60
Query: 92 RVK--LTPVDGVPGS-DYINANFVLGYKELKKFICAQGPMEHTVNDFWRMIWEQHLEIVI 148
L V PG YIN N + F+ Q P+ V DF + E+ +++V+
Sbjct: 61 IYPPVLKAVGAQPGRYPYINGNLI-DLDLPHTFVACQAPVPQGVPDFLETLSEKKVDLVV 119
Query: 149 MLTNLEEYSKIKCAKYWPEQEE---GDKTYGDFIVGLVNEKKFGEYILRELKLVRT---A 202
MLT L E +K +YWPE+EE G + + + + + EL +VR
Sbjct: 120 MLTKLREGGVLKAERYWPEEEEDSLSFPESGHDAIKVTRDAEASYEVDAELDIVRRPLVI 179
Query: 203 SGKESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKGPILVHCRA 256
+ Q Y+ W D PE+ + + + + PILVHC A
Sbjct: 180 HVPGKPMHRVLQVQYVGWPDHGVPESAASFDELLSVIKNCV--TTSPILVHCSA 231
Score = 101 bits (255), Expect = 4e-24
Identities = 25/107 (23%), Positives = 43/107 (40%), Gaps = 11/107 (10%)
Query: 361 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAK-----DYSNYINASFIEAYD 415
Q +E ++ S +N+ KNR I+ + YIN + I+ D
Sbjct: 29 QRQENPRNINFTTSLKNRHKNRYLDILANEETIYPPVLKAVGAQPGRYPYINGNLID-LD 87
Query: 416 NTESFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
+F+ Q P + V DF +SE + ++M LT+ +E
Sbjct: 88 LPHTFVACQAP-VPQGVPDFLETLSEKKVDLVVM----LTKLREGGV 129
Score = 101 bits (253), Expect = 6e-24
Identities = 27/110 (24%), Positives = 44/110 (40%), Gaps = 11/110 (10%)
Query: 456 QAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAK-----DYSNYINASFIEAYD 510
Q +E ++ S +N+ KNR I+ + YIN + I+ D
Sbjct: 29 QRQENPRNINFTTSLKNRHKNRYLDILANEETIYPPVLKAVGAQPGRYPYINGNLID-LD 87
Query: 511 NTESFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK---FRY 557
+F+ Q P + V DF +SE + ++ML+ L E RY
Sbjct: 88 LPHTFVACQAP-VPQGVPDFLETLSEKKVDLVVMLTK-LREGGVLKAERY 135
>3ps5_A Tyrosine-protein phosphatase non-receptor type 6; SH2, PTP,
hydrolase, signaling protein; 3.10A {Homo sapiens}
Length = 595
Score = 278 bits (713), Expect = 2e-86
Identities = 97/414 (23%), Positives = 168/414 (40%), Gaps = 38/414 (9%)
Query: 4 RNSLRHICRTLRRSHIPVASNPPDMAPITRADIVMEY-DERHYDSDYGFQQEFEQLVNEH 62
+ + P + + A I + + E + GF +EFE L +
Sbjct: 196 KTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNKKQESEDTAKAGFWEEFESLQKQE 255
Query: 63 F-PDRSTKASEARENQHKNRYPDIKAYDQTRVKLTPVDG-VPGSDYINANFVLGY----- 115
+ EN+ KNRY +I +D +RV L D +PGSDYINAN++
Sbjct: 256 VKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPD 315
Query: 116 KELKKFICAQGPMEHTVNDFWRMIWEQHLEIVIMLTNLEEYSKIKCAKYWPEQEEGDKTY 175
+ K +I +QG +E TVNDFW+M W+++ +++M T E + KC YWPE + Y
Sbjct: 316 ENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGM-QRAY 374
Query: 176 GDFIVGLVNEKKFGEYILRELKLVRTASGKESEERSIFQYHYLAWKDFQAPENPSGLLKF 235
G + V E EY LR L++ +G R I+ Y YL+W D P P G+L F
Sbjct: 375 GPYSVTNCGEHDTTEYKLRTLQVSPLDNGDLI--REIWHYQYLSWPDHGVPSEPGGVLSF 432
Query: 236 IKHVNEAYSL--EKGPILVHCRALVEVVQFGET-EIRATDLKSTLETLKRVNDGNKKSEL 292
+ +N+ GPI+VH A + G T I D+ ++ ++ ++
Sbjct: 433 LDQINQRQESLPHAGPIIVHSSAGI-----GRTGTIIVIDM-----LMENISTKGLDCDI 482
Query: 293 ELEFEETHNKCSD--HLIRSACQFYLIHQVNLASGPDQVYVLRLTQAKEENKSTTNAKSE 350
++ + + ++++ Q+ I+ ++ + E +S +SE
Sbjct: 483 DI-QKTIQMVRAQRSGMVQTEAQYKFIYVAIAQ------FIETTKKKLEVLQSQKGQESE 535
Query: 351 DLTVLGVRLTQAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKDYSN 404
+T + A +K K + R + ++
Sbjct: 536 YG-----NITYPPAMKNAHAKASRTSSKHKEDVYENLHTKNKREEKVKKQRSAD 584
Score = 140 bits (355), Expect = 7e-36
Identities = 57/315 (18%), Positives = 104/315 (33%), Gaps = 48/315 (15%)
Query: 163 KYWPEQEEGDKTYGDFIVGLVNEKKFGEYILRELKLVRTASGKESEERSIFQYHYLAWKD 222
+Y+ +Q+ + I+ L + + ++ Q W
Sbjct: 77 EYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHM---SGGQAETLLQAKGEPW-T 132
Query: 223 FQAPENPSGLLKFIKHV-------NEAYSLEKGPILVHCRALVEVVQFGETEIRATDLKS 275
F E+ S F+ V L I V C G L
Sbjct: 133 FLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEG--GRYTVG-GLETFDSLTD 189
Query: 276 TLETLKRVNDGNKKSELELEFEETHNKCSDHLIRSACQFYLIHQVNLASGPDQVYVLRLT 335
+E K+ + + + R + L +
Sbjct: 190 LVEHFKKTGIEEASGAF------VYLRQPYYATRVNAADIENRVLEL---------NKKQ 234
Query: 336 QAKEENKSTTNAKSEDLTVLGVRLTQAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVI 395
++++ K+ + E L V+ + ENK KNR ++I+P+D +RVI
Sbjct: 235 ESEDTAKAGFWEEFESLQKQEVKNLH------QRLEGQRPENKGKNRYKNILPFDHSRVI 288
Query: 396 LSPAKD---YSNYINASFIEAYDNTE-----SFIITQDPDMEHTVHDFWRMISEHTISTI 447
L S+YINA++I+ ++I +Q +E TV+DFW+M + I
Sbjct: 289 LQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIASQGC-LEATVNDFWQMAWQENSRVI 347
Query: 448 IMLSDRLTQAKEENK 462
+M T+ E+ +
Sbjct: 348 VM----TTREVEKGR 358
Score = 100 bits (250), Expect = 2e-22
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 13/106 (12%)
Query: 463 STTNAKSEENKDKNRDESIIPYDRNRVILSPAKD---YSNYINASFIEAYDNTE-----S 514
+ ENK KNR ++I+P+D +RVIL S+YINA++I+ +
Sbjct: 261 QRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKT 320
Query: 515 FIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK---FRY 557
+I +Q +E TV+DFW+M + I+M + E + Y
Sbjct: 321 YIASQGC-LEATVNDFWQMAWQENSRVIVMTTR-EVEKGRNKCVPY 364
Score = 29.9 bits (67), Expect = 2.6
Identities = 5/48 (10%), Positives = 12/48 (25%)
Query: 452 DRLTQAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKDYSN 499
+T + A +K K + R + ++
Sbjct: 537 GNITYPPAMKNAHAKASRTSSKHKEDVYENLHTKNKREEKVKKQRSAD 584
>2b3o_A Tyrosine-protein phosphatase, non-receptor type 6; protein tyrosine
phosphatase, SHP-1, signaling, hydrolase; 2.80A {Homo
sapiens} PDB: 1x6c_A 2rmx_A* 2yu7_A*
Length = 532
Score = 275 bits (705), Expect = 4e-86
Identities = 83/263 (31%), Positives = 124/263 (47%), Gaps = 13/263 (4%)
Query: 4 RNSLRHICRTLRRSHIPVASNPPDMAPITRADIVMEY-DERHYDSDYGFQQEFEQLVNEH 62
+ + P + + A I + + E + GF +EFE L +
Sbjct: 196 KTGIEEASGAFVYLRQPYYATRVNAADIENRVLELNKKQESEDTAKAGFWEEFESLQKQE 255
Query: 63 F-PDRSTKASEARENQHKNRYPDIKAYDQTRVKLTPVDG-VPGSDYINANFVLGY----- 115
+ EN+ KNRY +I +D +RV L D +PGSDYINAN++
Sbjct: 256 VKNLHQRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPD 315
Query: 116 KELKKFICAQGPMEHTVNDFWRMIWEQHLEIVIMLTNLEEYSKIKCAKYWPEQEEGDKTY 175
+ K +I +QG +E TVNDFW+M W+++ +++M T E + KC YWPE + Y
Sbjct: 316 ENAKTYIASQGCLEATVNDFWQMAWQENSRVIVMTTREVEKGRNKCVPYWPEVGM-QRAY 374
Query: 176 GDFIVGLVNEKKFGEYILRELKLVRTASGKESEERSIFQYHYLAWKDFQAPENPSGLLKF 235
G + V E EY LR L++ +G R I+ Y YL+W D P P G+L F
Sbjct: 375 GPYSVTNCGEHDTTEYKLRTLQVSPLDNGDLI--REIWHYQYLSWPDHGVPSEPGGVLSF 432
Query: 236 IKHVNEAYSL--EKGPILVHCRA 256
+ +N+ GPI+VHC A
Sbjct: 433 LDQINQRQESLPHAGPIIVHCSA 455
Score = 145 bits (367), Expect = 8e-38
Identities = 58/315 (18%), Positives = 104/315 (33%), Gaps = 48/315 (15%)
Query: 163 KYWPEQEEGDKTYGDFIVGLVNEKKFGEYILRELKLVRTASGKESEERSIFQYHYLAWKD 222
+Y+ +Q+ + I+ L + + ++ Q W
Sbjct: 77 EYYTQQQGVLQDRDGTIIHLKYPLNCSDPTSERWYHGHM---SGGQAETLLQAKGEPW-T 132
Query: 223 FQAPENPSGLLKFIKHV-------NEAYSLEKGPILVHCRALVEVVQFGETEIRATDLKS 275
F E+ S F+ V L I V C G E +
Sbjct: 133 FLVRESLSQPGDFVLSVLSDQPKAGPGSPLRVTHIKVMCEG--GRYTVGGLETFDS---- 186
Query: 276 TLETLKRVNDGNKKSELELEFEETHNKCSDHLIRSACQFYLIHQVNLASGPDQVYVLRLT 335
V K E + + + R + L +
Sbjct: 187 ---LTDLVEHFKKTGIEEASGAFVYLRQPYYATRVNAADIENRVLEL---------NKKQ 234
Query: 336 QAKEENKSTTNAKSEDLTVLGVRLTQAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVI 395
++++ K+ + E L V+ + ENK KNR ++I+P+D +RVI
Sbjct: 235 ESEDTAKAGFWEEFESLQKQEVKNLH------QRLEGQRPENKGKNRYKNILPFDHSRVI 288
Query: 396 LSPAKD---YSNYINASFIEAYDNTE-----SFIITQDPDMEHTVHDFWRMISEHTISTI 447
L S+YINA++I+ ++I +Q +E TV+DFW+M + I
Sbjct: 289 LQGRDSNIPGSDYINANYIKNQLLGPDENAKTYIASQGC-LEATVNDFWQMAWQENSRVI 347
Query: 448 IMLSDRLTQAKEENK 462
+M T+ E+ +
Sbjct: 348 VM----TTREVEKGR 358
Score = 101 bits (254), Expect = 5e-23
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 13/106 (12%)
Query: 463 STTNAKSEENKDKNRDESIIPYDRNRVILSPAKD---YSNYINASFIEAYDNTE-----S 514
+ ENK KNR ++I+P+D +RVIL S+YINA++I+ +
Sbjct: 261 QRLEGQRPENKGKNRYKNILPFDHSRVILQGRDSNIPGSDYINANYIKNQLLGPDENAKT 320
Query: 515 FIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETNK---FRY 557
+I +Q +E TV+DFW+M + I+M + E + Y
Sbjct: 321 YIASQGC-LEATVNDFWQMAWQENSRVIVMTTR-EVEKGRNKCVPY 364
>1lyv_A Protein-tyrosine phosphatase YOPH; toxin, hydrolase; 1.36A
{Yersinia enterocolitica} SCOP: c.45.1.2 PDB: 1qz0_A*
1ytn_A 1ytw_A 2i42_A 2y2f_A* 2ydu_A* 1xxp_A* 3blu_A*
1ypt_A* 3blt_A* 1xxv_A* 3f9b_A 3f9a_A 3f99_A 3bm8_A*
1pa9_A* 1yts_A
Length = 306
Score = 230 bits (587), Expect = 2e-71
Identities = 42/232 (18%), Positives = 78/232 (33%), Gaps = 39/232 (16%)
Query: 46 DSDYGFQQEFEQLVNEHFP-DRSTKASEARENQHKNRYPDIKAYDQTRVKLTPVDGVPGS 104
++ L N P + +A + NR+ DI+ QT V+
Sbjct: 30 EARAELSSRLTTLRNTLAPATNDPRYLQACGGEKLNRFRDIQCRRQTAVRA--------- 80
Query: 105 DYINANFVLGYKELKKFICAQGPMEHTVNDFWRMIWEQHLEIVIMLTNLEEYSKIKCA-- 162
+NAN++ + I Q P++ + +RM+ E ++ +L + E + +
Sbjct: 81 -DLNANYIQVGN--TRTIACQYPLQSQLESHFRMLAENRTPVLAVLASSSEIANQRFGMP 137
Query: 163 KYWPEQEEGDKTYGDFIVGLVNEKKFG---EYILRELKLVRTASGKESEERSIFQYHYLA 219
Y+ + TYG V ++ G + L +G+++ S+ H
Sbjct: 138 DYFRQSG----TYGSITVESKMTQQVGLGDGIMADMYTLTIREAGQKT--ISVPVVHVGN 191
Query: 220 WKDFQAP--ENPSGLLKFIKHVNE-------------AYSLEKGPILVHCRA 256
W D A E L + E K ++H RA
Sbjct: 192 WPDQTAVSSEVTKALASLVDQTAETKRNMYESKGSSAVADDSKLRPVIHSRA 243
Score = 96.0 bits (239), Expect = 4e-22
Identities = 20/130 (15%), Positives = 43/130 (33%), Gaps = 15/130 (11%)
Query: 333 RLTQAKEENKSTTNAKSEDLTVLGVRLTQAKEENKSTTNAKSEENKDKNRDESIIPYDRN 392
R T + A++E + L ++ + NR I +
Sbjct: 17 RATAPSTVSPYGPEARAELSSRLTTLRNTLAPATNDPRYLQACGGEKLNRFRDIQCRRQT 76
Query: 393 RVILSPAKDYSNYINASFIEAYDNTESFIITQDPDMEHTVHDFWRMISEHTISTIIMLSD 452
V +NA++I+ + I Q P ++ + +RM++E+ + +
Sbjct: 77 AVRA--------DLNANYIQVGNTR--TIACQYP-LQSQLESHFRMLAENRTPVLAV--- 122
Query: 453 RLTQAKEENK 462
L + E
Sbjct: 123 -LASSSEIAN 131
Score = 95.6 bits (238), Expect = 6e-22
Identities = 23/122 (18%), Positives = 45/122 (36%), Gaps = 16/122 (13%)
Query: 437 RMISEHTISTIIMLSDRLTQAKEENKSTTN----AKSEENKDKNRDESIIPYDRNRVILS 492
+S + LS RLT + TN ++ + NR I + V
Sbjct: 22 STVSPYGPEARAELSSRLTTLRNTLAPATNDPRYLQACGGEKLNRFRDIQCRRQTAVRA- 80
Query: 493 PAKDYSNYINASFIEAYDNTESFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEET 552
+NA++I+ + I Q P ++ + +RM++E+ + +L+ E
Sbjct: 81 -------DLNANYIQVGNTR--TIACQYP-LQSQLESHFRMLAENRTPVLAVLAS-SSEI 129
Query: 553 NK 554
Sbjct: 130 AN 131
>1g4w_R Protein tyrosine phosphatase SPTP; virulence factor, GTPase
activating protein, 4-helix bundle, disorder, signaling
protein; 2.20A {Salmonella typhimurium} SCOP: a.24.11.1
c.45.1.2 PDB: 1g4u_S
Length = 383
Score = 206 bits (526), Expect = 2e-61
Identities = 35/240 (14%), Positives = 71/240 (29%), Gaps = 25/240 (10%)
Query: 27 DMAPITRADIVMEYDERHYDSDYGFQQEFEQLVNEHFPDRSTKASEARENQHKNRYPDIK 86
D A ++ E E++ E S + I
Sbjct: 99 DKASTHELTQAVKKIHVIAKELKNVTAELEKI--EAGAPMPQTMSGPTLGLARFAVSSIP 156
Query: 87 AYDQTRVKLTPVDGVPGSDYINANFVLGYKELKKFICAQGP--MEHTVNDFWRMIWEQHL 144
QT+VKL+ +N G + P + +M+ E+
Sbjct: 157 INQQTQVKLSD----GMPVPVNTLTFDGKP---VALAGSYPKNTPDALEAHMKMLLEKEC 209
Query: 145 EIVIMLTNLEEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKKFGEYILRELKLVRTASG 204
+++LT+ ++ ++ + P G T+G+ + + ++ + G
Sbjct: 210 SCLVVLTSEDQ---MQAKQLPPY-FRGSYTFGEVHTNSQKVSSASQGEAIDQYNMQLSCG 265
Query: 205 KESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNE--------AYSLEKGPILVHCRA 256
++ +I H W D Q + L V S +K ++HC
Sbjct: 266 EKR--YTIPVLHVKNWPDHQPLPSTDQLEYLADRVKNSNQNGAPGRSSSDKHLPMIHCLG 323
Score = 81.1 bits (200), Expect = 1e-16
Identities = 11/99 (11%), Positives = 29/99 (29%), Gaps = 7/99 (7%)
Query: 460 ENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKDYSNYINASFIEAYDNTESFIITQ 519
T + + SI + +V + +N D +
Sbjct: 134 APMPQTMSGPTLGLARFAVSSIPINQQTQVK--LSDGMPVPVNTLTF---DGKPVALAGS 188
Query: 520 DP-DMEHTVHDFWRMISEHTISTIIMLSDGLEETNKFRY 557
P + + +M+ E S +++L+ ++ +
Sbjct: 189 YPKNTPDALEAHMKMLLEKECSCLVVLTS-EDQMQAKQL 226
Score = 79.5 bits (196), Expect = 3e-16
Identities = 12/99 (12%), Positives = 27/99 (27%), Gaps = 10/99 (10%)
Query: 365 ENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKDYSNYINASFIEAYDNTESFIITQ 424
T + + SI + +V + +N D +
Sbjct: 134 APMPQTMSGPTLGLARFAVSSIPINQQTQVK--LSDGMPVPVNTLTF---DGKPVALAGS 188
Query: 425 DP-DMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENK 462
P + + +M+ E S +++ LT +
Sbjct: 189 YPKNTPDALEAHMKMLLEKECSCLVV----LTSEDQMQA 223
>1vt4_I APAF-1 related killer DARK; drosophila apoptosome, apoptosis,
programmed cell death; HET: DTP; 6.90A {Drosophila
melanogaster} PDB: 3iz8_A*
Length = 1221
Score = 60.6 bits (146), Expect = 1e-09
Identities = 85/617 (13%), Positives = 176/617 (28%), Gaps = 201/617 (32%)
Query: 33 RADIVMEYDERHYDSDYGF-----QQEFEQLVNEHFPDRSTKASEARENQHKNRYPDIKA 87
+ ++V ++ E +Y F + E Q P T+ + ++ N
Sbjct: 75 QEEMVQKFVEEVLRINYKFLMSPIKTEQRQ------PSMMTRMYIEQRDRLYNDNQVFAK 128
Query: 88 YDQTRVK-----------LTP-----VDGVPGSDYINANFVLGYKELKKFICAQGPMEHT 131
Y+ +R++ L P +DGV GS G + +C ++
Sbjct: 129 YNVSRLQPYLKLRQALLELRPAKNVLIDGVLGS---------GKTWVALDVCLSYKVQCK 179
Query: 132 VND--FWRMIWEQHL--EIVIMLTNLEEYSKIKCAKYWPEQEEGDKTYGDFIVGLVNEKK 187
++ FW + + ++ ML L +I W + +
Sbjct: 180 MDFKIFWLNLKNCNSPETVLEMLQKL--LYQIDPN--WTSRSDHSSNI------------ 223
Query: 188 FGEYILRELKLVRTASGKESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEK 247
+R S + R L K + + LL + +V A +
Sbjct: 224 ----------KLRIHSIQAELRR------LLKSKPY-----ENCLL-VLLNVQNAKAWN- 260
Query: 248 GPILVHCRALV-----EVVQFGETEIRATDLKSTLETLKRVNDGNKKSE-LELEFEETHN 301
+ C+ L+ +V F T +L + E L +
Sbjct: 261 -AFNLSCKILLTTRFKQVTDFLSAATT------THISLDHHSMTLTPDEVKSLLLKYLDC 313
Query: 302 KCSDHLIRSACQFYLIH--QVNLASGPDQVYVLRLTQAKEENKSTTNAKSEDLTVLGVRL 359
+ D L R + ++++ + + + K N +L
Sbjct: 314 RPQD-LPREVLT---TNPRRLSIIAESIRDGLATWDNWKHVNCD--------------KL 355
Query: 360 TQAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAK------DYSNYINASFIEA 413
T E S + E + S+ P + I P + +
Sbjct: 356 TTIIE--SSLNVLEPAEYRKMFDRLSVFPPSAH--I--PTILLSLIWFDVIKSDVMVVVN 409
Query: 414 YDNTESFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENKSTTNAKSEENK 473
+ S + Q + ++ + L + K EN+ + ++
Sbjct: 410 KLHKYSLVEKQPKESTISIPS---------------IYLEL-KVKLENEYALHRSIVDHY 453
Query: 474 DKNRDESIIPYDRNRVILSPAKDYS-NYI---------------------NASFIEA--- 508
+ + +D + +I Y ++I + F+E
Sbjct: 454 NIPKT-----FDSDDLIPPYLDQYFYSHIGHHLKNIEHPERMTLFRMVFLDFRFLEQKIR 508
Query: 509 YDNT------------------ESFIITQDPDMEHTVHD---FWRMISEHTIST------ 541
+D+T + +I DP E V+ F I E+ I +
Sbjct: 509 HDSTAWNASGSILNTLQQLKFYKPYICDNDPKYERLVNAILDFLPKIEENLICSKYTDLL 568
Query: 542 -IIMLSDG---LEETNK 554
I ++++ EE +K
Sbjct: 569 RIALMAEDEAIFEEAHK 585
Score = 51.4 bits (122), Expect = 7e-07
Identities = 68/435 (15%), Positives = 128/435 (29%), Gaps = 111/435 (25%)
Query: 167 EQEEGDKTYGDFIVGLVNEKKFGE-----YILRELKLVRTASGKESEE-----RSIFQYH 216
E E Y D + V E F + + K + S +E + ++
Sbjct: 10 ETGEHQYQYKDIL--SVFEDAFVDNFDCKDVQDMPKSI--LSKEEIDHIIMSKDAVSGTL 65
Query: 217 YLAWKDFQAPENPSGLLKFIKHVNEA-YSLEKGPILVHCRALVEVVQFGETEIRATDLKS 275
L W E + KF++ V Y PI R + +
Sbjct: 66 RLFWTLLSKQEE--MVQKFVEEVLRINYKFLMSPIKTEQRQ------------PSMMTRM 111
Query: 276 TLETLKRV-NDGNKKSELELEFEETHNKCSDHLIR----------------------SAC 312
+E R+ ND ++ + + + K L+ C
Sbjct: 112 YIEQRDRLYNDNQVFAKYNVSRLQPYLKLRQALLELRPAKNVLIDGVLGSGKTWVALDVC 171
Query: 313 QFYLIHQVNLASGPDQVYVLRLTQAKEENKSTTNAKSEDLTVLGVRLTQA-KEENKSTTN 371
Y + +++ L L N ++ E L L ++ + ++N
Sbjct: 172 LSYKVQCKM----DFKIFWLNLK-----NCNSPETVLEMLQKLLYQIDPNWTSRSDHSSN 222
Query: 372 AKSEENKDKNRDESII---PYDRNRVILSPAKDYSNYINASFIEAYDNT-ESFIITQDPD 427
K + + ++ PY+ ++L N NA A++ + + + T+
Sbjct: 223 IKLRIHSIQAELRRLLKSKPYENCLLVL----L--NVQNAKAWNAFNLSCKILLTTRFKQ 276
Query: 428 MEHTVHDFWRMISEHTISTIIMLSDRLTQAKEENKS--TTNAKSEENKDKNRDESIIPYD 485
V DF +S T + I + +T +E KS + P
Sbjct: 277 ----VTDF---LSAATTTHISLDHHSMTLTPDEVKSLLLKYLDCRPQDLPREVLTTNP-- 327
Query: 486 RNRVILSPAKDYSNYINASFIEAYDNTESFIITQDPDMEHTVHDFWRMISEHTISTIIML 545
R + S I D T D W+ ++ ++TII
Sbjct: 328 --RRL-----------------------SIIAESIRDGLATW-DNWKHVNCDKLTTIIES 361
Query: 546 S-DGLEETN-KFRYK 558
S + LE + +
Sbjct: 362 SLNVLEPAEYRKMFD 376
Score = 48.3 bits (114), Expect = 7e-06
Identities = 40/233 (17%), Positives = 67/233 (28%), Gaps = 60/233 (25%)
Query: 26 PDMAPITRADIVMEYDERHYDSDYGFQQEFEQ--LVNEHF-------PDRSTKASEAREN 76
P A I + + + + + + LV + P + EN
Sbjct: 382 PPSAHIPTILLSLIWFDVIKSDVMVVVNKLHKYSLVEKQPKESTISIPSIYLELKVKLEN 441
Query: 77 Q---HK---NRYPDIKAYDQTRVKLTPVDGVPGSDYINANFVLGYKELKKFICAQGPMEH 130
+ H+ + Y K +D + +D Y + +G+ LK +
Sbjct: 442 EYALHRSIVDHYNIPKTFDSDDLIPPYLDQ-----YF-YSH-IGH-HLKN---IE--HPE 488
Query: 131 TVNDFWRMI-----------------WEQHLEIVIMLTNLEEYSKIKCAKYWPEQEEGDK 173
+ F RM+ W I+ L L+ Y C P+ E
Sbjct: 489 RMTLF-RMVFLDFRFLEQKIRHDSTAWNASGSILNTLQQLKFYKPYICDND-PKYERLVN 546
Query: 174 TYGDFIVGLVNEKKFGEYILR--ELKLVRTASGKESEERSIFQYHYLAWKDFQ 224
DF+ K E ++ L+R A E E A K Q
Sbjct: 547 AILDFL------PKIEENLICSKYTDLLRIALMAEDEA-----IFEEAHKQVQ 588
Score = 46.8 bits (110), Expect = 2e-05
Identities = 49/348 (14%), Positives = 106/348 (30%), Gaps = 79/348 (22%)
Query: 238 HVNEAYSLEKGPILVHCRALVEVVQFGETEIRATDLKSTLETLKRVNDGNKKSELELEFE 297
H + E G + ++ V F + + D K + K + L E
Sbjct: 2 HHHHHMDFETGEHQYQYKDILSV--FEDAFVDNFDCKDVQDMPKSI----------LSKE 49
Query: 298 ETHNKCSDHLIRSA---CQFYLIHQVNLASGPDQVYVLRLTQAKEENKSTTNAKSEDLTV 354
E DH+I S + + L Q + K +
Sbjct: 50 EI-----DHIIMSKDAVSGTLRL-----------FWTLLSKQEEMVQKFVEEVLRINYKF 93
Query: 355 LGVRL-TQAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKDYSNYINASFIEA 413
L + T+ ++ + T + ++ N ++ Y+ +R+ + Y A
Sbjct: 94 LMSPIKTEQRQPSMMTRMYIEQRDRLYNDNQVFAKYNVSRL-----QPYLKLRQALLE-- 146
Query: 414 YDNTESFII----------------TQDPDMEHTVHD--FW-RMISEHTISTII-MLSDR 453
++ ++ + FW + + ++ T++ ML
Sbjct: 147 -LRPAKNVLIDGVLGSGKTWVALDVCLSYKVQCKMDFKIFWLNLKNCNSPETVLEMLQKL 205
Query: 454 LTQAK----EENKSTTNAKSEENKDKNRDESII---PYDRNRVILSPAKDYSNYINASFI 506
L Q + ++N K + + ++ PY+ ++L N NA
Sbjct: 206 LYQIDPNWTSRSDHSSNIKLRIHSIQAELRRLLKSKPYENCLLVL----L--NVQNAKAW 259
Query: 507 EAYDNT-ESFIITQDPDMEHTVHDFWRMISEHTISTIIMLSDGLEETN 553
A++ + + + T+ V DF + T ++ S L
Sbjct: 260 NAFNLSCKILLTTRFKQ----VTDF-LSAATTTHISLDHHSMTLTPDE 302
>2pff_B Fatty acid synthase subunit beta; fatty acid synthase,
acyl-carrier-protein, beta-ketoacyl RED beta-ketoacyl
synthase, dehydratase; 4.00A {Saccharomyces cerevisiae}
Length = 2006
Score = 52.0 bits (124), Expect = 5e-07
Identities = 57/319 (17%), Positives = 91/319 (28%), Gaps = 115/319 (36%)
Query: 33 RADIVMEYDERHYDSDYGFQQEFEQLVNE-------HFPDRSTKASEARENQHKNRYPDI 85
RAD H+ YGF +V HF K REN Y +
Sbjct: 1648 RAD-------NHFKDTYGF--SILDIVINNPVNLTIHFGGEKGKR--IREN-----YSAM 1691
Query: 86 KAYDQTRVKLTPVDGVPGSDYINANFVLGYKELKKFICAQGPME---HTVNDFWRMIWEQ 142
++ T VDG ++ I E + T Q
Sbjct: 1692 I-FE------TIVDGKLKTEKIFKEI----NEHSTSYTFRSEKGLLSATQF-------TQ 1733
Query: 143 HLEIVIMLTNLEEYSKIKCAKYWPEQEEGDKTYGDFIVG--LVNEKKFGEY--------I 192
+ L + +K +G G L GEY +
Sbjct: 1734 ---PALTLMEKAAFEDLK--------SKGLIPADATFAGHSL------GEYAALASLADV 1776
Query: 193 LR-E--LKLVR-------TASGKESEERSIFQYHYLAWKDFQAPENPSGLLKF-----IK 237
+ E +++V A ++ RS Y +A NP + ++
Sbjct: 1777 MSIESLVEVVFYRGMTMQVAVPRDELGRS--NYGMIA-------INPGRVAASFSQEALQ 1827
Query: 238 HVNEAYSLEKGPILVHCRALVEVVQF---GET-----EIRATD-LKSTLETLKRVNDGNK 288
+V E G LVE+V + + ++RA D + + L +K
Sbjct: 1828 YVVERVGKRTG-------WLVEIVNYNVENQQYVAAGDLRALDTVTNVLNFIKLQKIDII 1880
Query: 289 KSELELEFEETHNKCSDHL 307
+ + L EE HL
Sbjct: 1881 ELQKSLSLEEV----EGHL 1895
Score = 29.6 bits (66), Expect = 3.5
Identities = 22/170 (12%), Positives = 53/170 (31%), Gaps = 37/170 (21%)
Query: 353 TVLGVRLTQAKEENKSTTNAKSEENKDKNRDESIIPYDRNRVILSPAKDYSNYINASFIE 412
T +Q +E+ +E + + L K + Y+ +S +E
Sbjct: 24 TASFFIASQLQEQFNKILPEPTEGFAADDEPTTPAE-------LV-GK-FLGYV-SSLVE 73
Query: 413 AYDNTESFIITQDPDMEHTVHDFWRMI---SE-HTISTIIMLSDRLTQAKEEN--KSTTN 466
F D + + +F ++ H ++ ++ + T K + K+
Sbjct: 74 P-SKVGQF----DQVLNLCLTEFENCYLEGNDIHALAAKLLQENDTTLVKTKELIKNYIT 128
Query: 467 AKSEENKDKNRDESIIPYDRNR--VILSPAKDYSNYINASF-----IEAY 509
A+ + P+D+ + + + + A F + Y
Sbjct: 129 ARIMAKR---------PFDKKSNSALFRAVGEGNAQLVAIFGGQGNTDDY 169
>2i6j_A Ssoptp, sulfolobus solfataricus protein tyrosine phosphatase; PTP
domain, hydrolase; 1.66A {Sulfolobus solfataricus} PDB:
2i6i_A 2i6m_A 3ro1_A* 2i6o_A* 2dxp_A* 2i6p_A*
Length = 161
Score = 46.0 bits (109), Expect = 4e-06
Identities = 12/67 (17%), Positives = 24/67 (35%), Gaps = 6/67 (8%)
Query: 190 EYILRELKLVRTASGKESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKGP 249
++ + E + ++ + Q ++ D P + L +K + EK
Sbjct: 38 DWEIEESWGDKDYYLSILKKNGL-QPLHIPIPDGGVPSDSQ-FLTIMKWLLS----EKEG 91
Query: 250 ILVHCRA 256
LVHC
Sbjct: 92 NLVHCVG 98
>2img_A Dual specificity protein phosphatase 23; DUSP23, VHZ, LDP-3, dual
specicity protein phosphatase 23, DUS23_human, malate,
structural genomics, PSI; 1.93A {Homo sapiens}
Length = 151
Score = 41.2 bits (97), Expect = 2e-04
Identities = 14/51 (27%), Positives = 22/51 (43%), Gaps = 2/51 (3%)
Query: 206 ESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKGPILVHCRA 256
S+ H L DF P P + +F++ V+EA + + VHC
Sbjct: 50 HSDSCPGLTLHRLRIPDFCPP-APDQIDRFVQIVDEANA-RGEAVGVHCAL 98
>1fpz_A Cyclin-dependent kinase inhibitor 3; alpha-beta sandwich,
hydrolase; 2.00A {Homo sapiens} SCOP: c.45.1.1 PDB:
1fq1_A*
Length = 212
Score = 34.7 bits (79), Expect = 0.048
Identities = 9/80 (11%), Positives = 21/80 (26%), Gaps = 10/80 (12%)
Query: 177 DFIVGLVNEKKFGEYILRELKLVRTASGKESEERSIFQYHYLAWKDFQAPENPSGLLKFI 236
I + +Y + L + G H+ D P + + + +
Sbjct: 73 QDIFVFCTRGELSKYRVPNLLDLYQQCG--------IITHHHPIADGGTP-DIASCCEIM 123
Query: 237 KHVNEAYSLEKGPILVHCRA 256
+ + L+H
Sbjct: 124 EELTTCLK-NYRKTLIHSYG 142
>3mmj_A MYO-inositol hexaphosphate phosphohydrolase; phytase, protein
tyrosine phosphatase, inositol phosphate, I phosphatase;
HET: IHP; 1.60A {Selenomonas ruminantium} PDB: 1u24_A
1u25_A* 1u26_A* 3o3l_A* 3moz_A* 2pt0_A 2psz_A 3d1h_A
3d1o_A 3d1q_A 2b4u_A 2b4p_A 2b4o_A
Length = 314
Score = 33.9 bits (77), Expect = 0.13
Identities = 10/52 (19%), Positives = 19/52 (36%), Gaps = 3/52 (5%)
Query: 205 KESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKGPILVHCRA 256
+E E + +Y +A D P P + +F+ + + H A
Sbjct: 174 QEVAEAAGMRYFRIAATDHVWPT-PENIDRFLAFYRTLP--QDAWLHFHSEA 222
>3f41_A Phytase; tandem repeat, protein tyrosine phosphatase, inositol
phosphatase, hydrolase; 2.30A {Mitsuokella multacida}
Length = 629
Score = 33.6 bits (76), Expect = 0.17
Identities = 12/78 (15%), Positives = 30/78 (38%), Gaps = 3/78 (3%)
Query: 179 IVGLVNEKKFGEYILRELKLVRTASGKESEERSIFQYHYLAWKDFQAPENPSGLLKFIKH 238
++ +K + +K+ + ++ E++ Y+ +A D P + + +FI
Sbjct: 465 LIVAELDKDKMPIDPKPVKIESVMTEQQLVEKNGLHYYRIAATDHIWPS-AANIDEFINF 523
Query: 239 VNEAYSLEKGPILVHCRA 256
+ HC+A
Sbjct: 524 TRTMP--ANAWLHFHCQA 539
Score = 33.2 bits (75), Expect = 0.27
Identities = 10/52 (19%), Positives = 20/52 (38%), Gaps = 3/52 (5%)
Query: 205 KESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKGPILVHCRA 256
+E ++ Y L +D P+ + KF++ + + HC A
Sbjct: 193 EEMVKQHGANYFRLTLQDHFRPD-DPDVDKFLEFYKSLP--KDAWLHYHCYA 241
>1rxd_A Protein tyrosine phosphatase type IVA, member 1; protein tyrosine
phosphatase IVA1...; structural genomics, NYSGXRC,
unknown function, PSI; 1.90A {Homo sapiens} SCOP:
c.45.1.1 PDB: 1xm2_A 1zck_A 1r6h_A 1v3a_A
Length = 159
Score = 32.3 bits (73), Expect = 0.19
Identities = 11/53 (20%), Positives = 18/53 (33%), Gaps = 2/53 (3%)
Query: 205 KESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKG-PILVHCRA 256
E+ + D P + + ++ V + E G I VHC A
Sbjct: 54 TTLVEKEGIHVLDWPFDDGAPP-SNQIVDDWLSLVKIKFREEPGCCIAVHCVA 105
>1ohe_A CDC14B, CDC14B2 phosphatase; protein phosphatase, cell cycle,
hydrolase; HET: SEP; 2.20A {Homo sapiens} SCOP: c.45.1.1
c.45.1.1 PDB: 1ohc_A 1ohd_A
Length = 348
Score = 33.1 bits (75), Expect = 0.22
Identities = 12/44 (27%), Positives = 20/44 (45%), Gaps = 5/44 (11%)
Query: 213 FQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKGPILVHCRA 256
F +H L + D P + + +F+ A +G I VH +A
Sbjct: 240 FDHHDLFFADGSTP-TDAIVKEFLDICENA----EGAIAVHSKA 278
>3nme_A Ptpkis1 protein, SEX4 glucan phosphatase; dual specificity
phosphatase, carbohydrate BIND hydrolase; 2.40A
{Arabidopsis thaliana}
Length = 294
Score = 32.4 bits (73), Expect = 0.30
Identities = 12/67 (17%), Positives = 25/67 (37%)
Query: 190 EYILRELKLVRTASGKESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKGP 249
+ L + ++ +++ S Q+ +DF A + L + + +A G
Sbjct: 49 DPDLEYFGVDISSIQAYAKKYSDIQHIRCEIRDFDAFDLRMRLPAVVGTLYKAVKRNGGV 108
Query: 250 ILVHCRA 256
VH A
Sbjct: 109 TYVHSTA 115
>3s4o_A Protein tyrosine phosphatase-like protein; structural genomics,
medical structural genomics of pathogen protozoa, MSGPP,
unknown function; HET: MSE EPE; 2.30A {Leishmania major}
Length = 167
Score = 30.7 bits (69), Expect = 0.80
Identities = 11/59 (18%), Positives = 19/59 (32%), Gaps = 8/59 (13%)
Query: 205 KESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEA-------YSLEKGPILVHCRA 256
+ H + D P + L ++K ++ S+ I VHC A
Sbjct: 61 ATLVKSRGIDVHSWPFDDGAPP-TRAVLDSWLKLLDTELARQQEDPSVPPPTIGVHCVA 118
>4e15_A Kynurenine formamidase; alpha/beta hydrolase fold,
hydrolase-hydrolase inhibitor COM; HET: SEB; 1.50A
{Drosophila melanogaster} PDB: 4e14_A* 4e11_A
Length = 303
Score = 30.7 bits (69), Expect = 1.2
Identities = 11/70 (15%), Positives = 23/70 (32%), Gaps = 1/70 (1%)
Query: 26 PDMAPITRADIVMEYDERHYDSDYGFQQEFEQLVNEHFPDRSTKASEARENQHKNRYPDI 85
M D+ +Y ++ + + Q E V EHF + + + +
Sbjct: 2 GHMYNPRCKDLDRDYFPSYHTTRFQDQPEPNLAVLEHFVRVTKQHGRELTEKQGITVDHL 61
Query: 86 KAYDQTRVKL 95
Y + R +
Sbjct: 62 -RYGEGRQLV 70
>2c46_A MRNA capping enzyme; phosphatase, transferase, hydrolase, mRNA
processing, multifunctional enzyme,
nucleotidyltransferase; 1.6A {Homo sapiens} PDB: 1i9s_A
1i9t_A
Length = 241
Score = 29.7 bits (66), Expect = 1.9
Identities = 10/49 (20%), Positives = 13/49 (26%), Gaps = 1/49 (2%)
Query: 209 ERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEK-GPILVHCRA 256
E+ +Y L K FI+ I VHC
Sbjct: 102 EKEGIKYIKLQCKGHGECPTTENTETFIRLCERFNERNPPELIGVHCTH 150
>1qzv_F Plant photosystem I: subunit PSAF; photosynthesis,plant
photosynthetic reaction center, peripheral antenna; HET:
CL1 PQN; 4.44A {Pisum sativum} SCOP: i.5.1.1
Length = 154
Score = 28.8 bits (63), Expect = 3.2
Identities = 10/36 (27%), Positives = 12/36 (33%), Gaps = 8/36 (22%)
Query: 75 ENQHKNRYPDIKAYDQTRVKLTPVDGVPGSDYINAN 110
E Q +K Q +KL D P I A
Sbjct: 18 EKQ------ALKKL-QASLKLYADDSAPALA-IKAT 45
Score = 28.4 bits (62), Expect = 3.8
Identities = 8/36 (22%), Positives = 14/36 (38%), Gaps = 7/36 (19%)
Query: 4 RNSLRHICRTLRRSHIPVASNPPDMAPITRADIVME 39
+ +L+ + +L+ A D AP ME
Sbjct: 19 KQALKKLQASLK----LYA---DDSAPALAIKATME 47
>3rgo_A Protein-tyrosine phosphatase mitochondrial 1; phosphatidylglycerol
phosphate (PGP) phosphatase, hydrolase; 1.93A {Mus
musculus} PDB: 3rgq_A*
Length = 157
Score = 28.1 bits (63), Expect = 4.2
Identities = 9/63 (14%), Positives = 24/63 (38%), Gaps = 1/63 (1%)
Query: 194 RELKLVRTASGKESEERSIFQYHYLAWKDFQAPENPSGLLKFIKHVNEAYSLEKGPILVH 253
E + + + +++ + L+ D + L K ++ + + + VH
Sbjct: 37 EEYETRFLCNTSKEWKKAGVEQLRLSTVDMTGVPTLANLHKGVQFALKYQA-LGQCVYVH 95
Query: 254 CRA 256
C+A
Sbjct: 96 CKA 98
>2j16_A SDP-1, tyrosine-protein phosphatase YIL113W; hydrolase,
hypothetical protein; 2.7A {Saccharomyces cerevisiae}
PDB: 2j17_A* 2j16_B
Length = 182
Score = 27.4 bits (61), Expect = 10.0
Identities = 7/47 (14%), Positives = 18/47 (38%), Gaps = 9/47 (19%)
Query: 213 FQYHYLAWKDFQAPENPSGLLKFIKHVN---EAYSLEKGPILVHCRA 256
+YH+ W+ + + + A + ++ IL+H +
Sbjct: 86 VEYHHYRWEHDS------QIALDLPSLTSIIHAATTKREKILIHAQC 126
Database: pdb70
Posted date: Sep 4, 2012 3:40 AM
Number of letters in database: 6,701,793
Number of sequences in database: 27,921
Lambda K H
0.315 0.131 0.380
Gapped
Lambda K H
0.267 0.0586 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 27921
Number of Hits to DB: 8,305,166
Number of extensions: 488620
Number of successful extensions: 1312
Number of sequences better than 10.0: 1
Number of HSP's gapped: 973
Number of HSP's successfully gapped: 149
Length of query: 558
Length of database: 6,701,793
Length adjustment: 98
Effective length of query: 460
Effective length of database: 3,965,535
Effective search space: 1824146100
Effective search space used: 1824146100
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 60 (27.2 bits)