BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13255
(156 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|328718270|ref|XP_001946118.2| PREDICTED: DNA mismatch repair protein Msh6-like [Acyrthosiphon
pisum]
Length = 1185
Score = 85.9 bits (211), Expect = 6e-15, Method: Composition-based stats.
Identities = 41/73 (56%), Positives = 51/73 (69%)
Query: 84 LERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMR 143
L R L T ++ GCRVPA SL L PVDRIFTR+GA DN+ +ST+ EL E+ I+
Sbjct: 972 LMRQLGIITVMAHMGCRVPAKSLLLNPVDRIFTRIGANDNIIAGESTFFVELCETSAILH 1031
Query: 144 HASKYSLALVDEL 156
HAS++SL LVDEL
Sbjct: 1032 HASRFSLVLVDEL 1044
Score = 84.7 bits (208), Expect = 1e-14, Method: Composition-based stats.
Identities = 40/88 (45%), Positives = 59/88 (67%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ L NLH+L NS + GTL+ +L+HC T FGKR+L L PLT + +IK RQ+A
Sbjct: 567 ILDAITLKNLHILENSAGSNAGTLLNKLNHCSTPFGKRLLHQWLCNPLTTISSIKARQNA 626
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
IS L+ + +++R+++ L DLER+
Sbjct: 627 ISSLIVIPDLMQEIRSELASLPDLERLF 654
>gi|326498831|dbj|BAK02401.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1331
Score = 84.0 bits (206), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/89 (47%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ AL NL +L N+ GTL EQL+HCVT FGKR+L+ +V+PL + +AI QRQ A
Sbjct: 697 ILDAAALENLEILENATGGLSGTLYEQLNHCVTGFGKRLLKRWIVRPLYDREAILQRQGA 756
Query: 61 ISVLLDQKH-ITEQMRAKMKDLRDLERML 88
I++ H Q R + L D+ER+L
Sbjct: 757 IAIFKGVGHECAMQFRKDLCRLPDMERLL 785
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA++L L+ VDRIF RMGA+D++ +ST+L EL E+ +++ A+K SL +DEL
Sbjct: 1105 GANVPAENLELSLVDRIFVRMGARDHIMAGKSTFLVELMETASVLSSATKNSLVALDEL 1163
>gi|66827461|ref|XP_647085.1| hypothetical protein DDB_G0268614 [Dictyostelium discoideum AX4]
gi|74897500|sp|Q55GU9.1|MSH6_DICDI RecName: Full=DNA mismatch repair protein Msh6
gi|60475825|gb|EAL73760.1| hypothetical protein DDB_G0268614 [Dictyostelium discoideum AX4]
Length = 1260
Score = 82.8 bits (203), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L NL + NS D +TEGTL + +D C T+FGKRM R + +PL N +AI RQ
Sbjct: 645 ILDGQCLVNLEIFNNSTDGSTEGTLFKLMDRCTTAFGKRMFRQWICRPLANKNAIVDRQK 704
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L D +++ A + L DLERM+
Sbjct: 705 AIEFLRDSPETLQKVTAILNKLPDLERMI 733
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC V A S ++ VDRIFTR+GA DN+ QST++ EL E+ ++++A+K SL ++DEL
Sbjct: 1050 GCYVSASSCEMSIVDRIFTRLGANDNILAGQSTFMVELAETSAVLKYATKRSLVILDEL 1108
>gi|294940586|ref|XP_002782821.1| DNA mismatch repair protein MSH6-1, putative [Perkinsus marinus
ATCC 50983]
gi|239894872|gb|EER14617.1| DNA mismatch repair protein MSH6-1, putative [Perkinsus marinus
ATCC 50983]
Length = 616
Score = 81.6 bits (200), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 55/71 (77%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
R+ ++ ++ GCRVPA S LTPVDRIFTR+GA+D++ +ST+L EL E+ +++HA
Sbjct: 415 RLGATAVIIAQLGCRVPASSFKLTPVDRIFTRIGARDSILENKSTFLIELEETGAVLQHA 474
Query: 146 SKYSLALVDEL 156
+K+SLA++DEL
Sbjct: 475 TKHSLAVIDEL 485
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/86 (43%), Positives = 54/86 (62%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ AL L VL N+D EG+L+ QLDH VT FGKR+LR + PL I +R D
Sbjct: 26 VLDANALEQLEVLRNTDGKLEGSLLNQLDHTVTPFGKRLLRQWVCCPLRAKTDIDRRLDV 85
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLER 86
+ LL++ + +R++M+ L D+ER
Sbjct: 86 VDWLLEKTELVADLRSRMRKLPDIER 111
>gi|390334252|ref|XP_797647.3| PREDICTED: DNA mismatch repair protein Msh6-like [Strongylocentrotus
purpuratus]
Length = 1462
Score = 81.3 bits (199), Expect = 1e-13, Method: Composition-based stats.
Identities = 35/59 (59%), Positives = 48/59 (81%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTPVDR+FTR+GA+DN+ +ST+ EL+E+ +I++HASK+SL LVDEL
Sbjct: 1260 GCYVPAEGCRLTPVDRVFTRLGARDNILSGESTFFVELSETASILKHASKHSLVLVDEL 1318
>gi|294892329|ref|XP_002774009.1| DNA mismatch repair protein mutS, putative [Perkinsus marinus ATCC
50983]
gi|239879213|gb|EER05825.1| DNA mismatch repair protein mutS, putative [Perkinsus marinus ATCC
50983]
Length = 943
Score = 81.3 bits (199), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 36/71 (50%), Positives = 55/71 (77%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
R+ ++ ++ GCRVPA S LTPVDRIFTR+GA+D++ +ST+L EL E+ +++HA
Sbjct: 742 RLSATAVIIAQLGCRVPASSFKLTPVDRIFTRIGARDSILENKSTFLIELEETGAVLQHA 801
Query: 146 SKYSLALVDEL 156
+K+SLA++DEL
Sbjct: 802 TKHSLAVIDEL 812
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 53/86 (61%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ AL L VL N+D EG+L+ QLDH VT FGKR+LR + PL +R D
Sbjct: 343 VLDANALEQLEVLRNTDGKLEGSLLNQLDHTVTPFGKRLLRQWVCCPLRAKTDTDRRLDV 402
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLER 86
+ LL++ + +R++M+ L D+ER
Sbjct: 403 VDWLLERTELVADLRSRMRKLPDIER 428
>gi|346974058|gb|EGY17510.1| DNA mismatch repair protein msh6 [Verticillium dahliae VdLs.17]
Length = 1211
Score = 80.9 bits (198), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L NL V NS N +TEGTL L+ CVT FGKR+ R + PL ++D I +R D
Sbjct: 624 ILDGQTLINLEVFANSANGSTEGTLFTLLNKCVTPFGKRLFRQWVCHPLCDIDRINERLD 683
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L + + EQ A+M + DLER++
Sbjct: 684 AVDMLNSDRSVREQFSAQMTKMPDLERLI 712
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM ++ ++ GC VPA S LTPVDRI +R+GA DN+ +QST+ EL+E++ I+ A
Sbjct: 988 RMTCTAVIMAQIGCYVPATSARLTPVDRIMSRLGANDNIFASQSTFFVELSETKKILAEA 1047
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1048 TPRSLVILDEL 1058
>gi|302416361|ref|XP_003006012.1| DNA mismatch repair protein msh6 [Verticillium albo-atrum VaMs.102]
gi|261355428|gb|EEY17856.1| DNA mismatch repair protein msh6 [Verticillium albo-atrum VaMs.102]
Length = 1193
Score = 80.9 bits (198), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L NL V NS N +TEGTL L+ CVT FGKR+ R + PL ++D I +R D
Sbjct: 606 ILDGQTLINLEVFANSANGSTEGTLFTLLNKCVTPFGKRLFRQWVCHPLCDIDRINERLD 665
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L + + EQ A+M + DLER++
Sbjct: 666 AVDMLNSDRSVREQFSAQMTKMPDLERLI 694
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM ++ ++ GC VPA S LTPVDRI +R+GA DN+ +QST+ EL+E++ I+ A
Sbjct: 970 RMTCTAVIMAQIGCYVPATSARLTPVDRIMSRLGANDNIFASQSTFFVELSETKKILAEA 1029
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1030 TPRSLVILDEL 1040
>gi|71018553|ref|XP_759507.1| hypothetical protein UM03360.1 [Ustilago maydis 521]
gi|46098995|gb|EAK84228.1| hypothetical protein UM03360.1 [Ustilago maydis 521]
Length = 1716
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 54/89 (60%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ +L +L+VL N + T EGTL L+ CVT FGKR+ + LV PL DAI RQDA
Sbjct: 689 VLDAQSLTHLNVLQNDEGTDEGTLHRLLNRCVTPFGKRLFKIWLVAPLATADAINARQDA 748
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLP 89
+ LL +Q K L D+ER++P
Sbjct: 749 VEDLLKNPCFGDQFETFGKALPDIERIVP 777
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 45/71 (63%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
R ++ L+ GCRVPA S L+PVDRI +RMGA D + G ST++ E+ E+ I+
Sbjct: 1054 RTCATAVILAQLGCRVPALSARLSPVDRIASRMGANDQIFGNNSTFMVEMLEASRIINEC 1113
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1114 TPRSLVIMDEL 1124
>gi|383936558|ref|ZP_09989982.1| DNA mismatch repair protein MutS [Rheinheimera nanhaiensis E407-8]
gi|383702340|dbj|GAB60073.1| DNA mismatch repair protein MutS [Rheinheimera nanhaiensis E407-8]
Length = 857
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 51/65 (78%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ GC VPADS + PVDRIFTR+GA D+L+ +ST++ E+TE+ TI+ HA+++SL
Sbjct: 635 VLMAYIGCFVPADSAEIGPVDRIFTRIGASDDLASGRSTFMVEMTETATILHHATEHSLV 694
Query: 152 LVDEL 156
L+DE+
Sbjct: 695 LMDEI 699
Score = 39.7 bits (91), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N E TL LD T+ G R+L+ + PL + R DA
Sbjct: 272 VLDAATRRNLELTQNLAGNYEHTLAAVLDRSQTAMGSRLLKRWIHAPLRQQAQVNARLDA 331
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
++ L Q ++++ +K + D+ER++
Sbjct: 332 VAELQPQ---YDELQPLLKQIGDIERVI 356
>gi|443897710|dbj|GAC75049.1| mismatch repair ATPase MSH6 [Pseudozyma antarctica T-34]
Length = 2956
Score = 80.5 bits (197), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ +L +L+VL N + T EGTL L+ CVT FGKR+ + LV PL DAI+ RQDA
Sbjct: 1953 VLDAQSLTHLNVLQNDEGTEEGTLHRLLNRCVTPFGKRLFKIWLVAPLATADAIRARQDA 2012
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLP 89
+ LL ++ K L D+ER++P
Sbjct: 2013 VEDLLKYPGFGDEFETFGKTLPDIERIVP 2041
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 39/59 (66%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GCRVPA S L+PVDRI +RMGA D + ST++ E+ E+ I+ + SL ++DEL
Sbjct: 2330 GCRVPAASARLSPVDRIASRMGANDQIFRNNSTFMVEMLEASRIINECTPRSLVIMDEL 2388
>gi|327262723|ref|XP_003216173.1| PREDICTED: DNA mismatch repair protein Msh6-like [Anolis
carolinensis]
Length = 1361
Score = 80.5 bits (197), Expect = 2e-13, Method: Composition-based stats.
Identities = 40/88 (45%), Positives = 55/88 (62%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD LANL +L N+ + EGTL+E++D C T FGKR+L+ L PL N AI R DA
Sbjct: 737 VLDGVTLANLEILENATGSPEGTLLERIDTCCTPFGKRLLKQWLCAPLCNPCAINDRLDA 796
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ LL + ++R +K L DLER+L
Sbjct: 797 VENLLAEAARVSEIRDHLKKLPDLERLL 824
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 46/59 (77%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+S LTPVDR+FTR+GA D + +ST+ EL+E+ +++RHA+++S L+DEL
Sbjct: 1161 GCFVPAESCRLTPVDRVFTRLGASDRIMSGESTFFVELSETSSVLRHATEHSFVLMDEL 1219
>gi|357153628|ref|XP_003576514.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Brachypodium
distachyon]
Length = 1318
Score = 80.1 bits (196), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I D+ AL NL +L N+ GTL QL+HCVT FGKR+L+ +V+PL + AI QRQ A
Sbjct: 682 IFDAAALENLEILENATGGLSGTLYAQLNHCVTGFGKRLLKRWIVRPLYDSKAILQRQGA 741
Query: 61 ISVLLDQKH-ITEQMRAKMKDLRDLERML 88
I++ H Q R + L D+ER+L
Sbjct: 742 IAIFKGVGHECAIQFRKDLSRLPDMERLL 770
Score = 62.0 bits (149), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA++ + VDRIF RMGA+D++ QST+L EL E+ +++ A+K SL +DEL
Sbjct: 1091 GANVPAENFEFSLVDRIFVRMGARDHIMAGQSTFLVELMETASVLSSATKNSLVALDEL 1149
>gi|308505948|ref|XP_003115157.1| CRE-MSH-6 protein [Caenorhabditis remanei]
gi|308259339|gb|EFP03292.1| CRE-MSH-6 protein [Caenorhabditis remanei]
Length = 1181
Score = 79.7 bits (195), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 34/61 (55%), Positives = 49/61 (80%)
Query: 96 FQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDE 155
FQGC+VPA S+ LTP+DRIFTR+GA D + +ST+ EL E++ ++++A+K+SL LVDE
Sbjct: 978 FQGCKVPAFSMRLTPIDRIFTRIGANDRIMCGESTFFIELKETDIMLKNATKHSLLLVDE 1037
Query: 156 L 156
L
Sbjct: 1038 L 1038
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD TAL NL+++ N ++ +L ++ C T FG+R+LR+ L++P + ++ RQ+A
Sbjct: 562 ILDGTALENLNIVPNGRDSHLTSLYYVINKCSTPFGRRLLRSWLLQPTCDPKKLRLRQEA 621
Query: 61 ISVLL--DQKHITEQMRAKMKDLRDLERML 88
+ + D A +K + DL+R+L
Sbjct: 622 VKWMTSSDATSFVNVATATLKKIPDLDRLL 651
>gi|302799426|ref|XP_002981472.1| hypothetical protein SELMODRAFT_114224 [Selaginella moellendorffii]
gi|300151012|gb|EFJ17660.1| hypothetical protein SELMODRAFT_114224 [Selaginella moellendorffii]
Length = 975
Score = 79.3 bits (194), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 62/93 (66%), Gaps = 8/93 (8%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LDS AL NL +L NS N GTL+ LDHC+T FG+R+L+ +V+PL N+++I QRQ+
Sbjct: 354 VLDSAALDNLEILENSSNCGVAGTLLCLLDHCITPFGRRLLKQWIVRPLCNIESIVQRQN 413
Query: 60 AISVLLDQKHITE----QMRAKMKDLRDLERML 88
A+ +D + + E + R ++ + DLER+L
Sbjct: 414 AV---VDMQGVAENAVSEFRRELSGIPDLERLL 443
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA+SL L+ DR+F RMGAKD + QST+L EL E+ ++R A++ S +DEL
Sbjct: 756 GSEVPAESLELSLTDRLFVRMGAKDQIMTGQSTFLIELLETAVMLRCATQNSFVALDEL 814
>gi|148236863|ref|NP_001089247.1| mutS homolog 6 [Xenopus laevis]
gi|58399508|gb|AAH89270.1| MGC85188 protein [Xenopus laevis]
Length = 1340
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 47/59 (79%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPADS LTPVDR+FTR+GA D + +ST+ EL+E+ +I++HA+++SL L+DEL
Sbjct: 1139 GCYVPADSCRLTPVDRVFTRLGASDRIMAGESTFFVELSETSSILQHATEHSLVLLDEL 1197
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL +L N N +TEGTL+E+LD C T FGKR+L+ L PL N +I R +
Sbjct: 714 VLDGVTLTNLEILQNGTNGSTEGTLLEKLDTCSTPFGKRLLKQWLCAPLCNPFSINDRLN 773
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L+ ++ +K L DLER+L
Sbjct: 774 AVEDLMALPGKVSEVSELLKKLPDLERLL 802
>gi|196016559|ref|XP_002118131.1| hypothetical protein TRIADDRAFT_33687 [Trichoplax adhaerens]
gi|190579257|gb|EDV19356.1| hypothetical protein TRIADDRAFT_33687 [Trichoplax adhaerens]
Length = 984
Score = 79.3 bits (194), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 46/59 (77%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S L+PVDR+FTR+GA D + +ST+ EL+E+ TI+RHA+K+SL L+DEL
Sbjct: 806 GCYVPATSCCLSPVDRLFTRLGASDRIMSGESTFFVELSETTTILRHATKHSLVLLDEL 864
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVL-TNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD+ L NL +L T SD+ GTL+E+LD+CVT GKR+ + L PL + I R D
Sbjct: 380 ILDAVTLINLDILPTASDSGLRGTLLEKLDYCVTPTGKRLFKHWLCTPLCDPVLINDRLD 439
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
++ L+ ++ + DLE+++
Sbjct: 440 SVEDLMAMSSAVSDCLNTLRKIPDLEKLI 468
>gi|449275264|gb|EMC84167.1| DNA mismatch repair protein Msh6, partial [Columba livia]
Length = 1247
Score = 79.0 bits (193), Expect = 6e-13, Method: Composition-based stats.
Identities = 42/89 (47%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL VL N N TTEGTL+E++D C T FGKR+L+ L PL N +I R D
Sbjct: 647 VLDGVTLMNLEVLQNGTNGTTEGTLLERIDSCCTPFGKRLLKQWLCAPLCNPKSINDRLD 706
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ LL H ++ +K L DLER+L
Sbjct: 707 AVEDLLAVPHKMSEVSEHLKKLPDLERLL 735
Score = 75.5 bits (184), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 46/59 (77%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I++HA+++SL LVDEL
Sbjct: 1070 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETSSILQHATEHSLVLVDEL 1128
>gi|388851859|emb|CCF54453.1| related to MSH6-DNA mismatch repair protein [Ustilago hordei]
Length = 1313
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 56/89 (62%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+L++ +L +L+VL N + T EGTL L+ CVT FGKR+ + LV PL DAI+ RQDA
Sbjct: 690 VLNAQSLTHLNVLQNDEGTDEGTLHRLLNRCVTPFGKRLFKIWLVAPLAAADAIRARQDA 749
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLP 89
+ LL + ++ K L D+ER++P
Sbjct: 750 VEDLLKNQGFGDEFETFGKALPDIERIVP 778
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 39/59 (66%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GCRVPA S ++PVDRI +RMGA D + ST++ E+ E+ I+ + SL ++DEL
Sbjct: 1067 GCRVPAASARISPVDRIASRMGANDQIFRNNSTFMVEMLEASRIINECTPRSLVIMDEL 1125
>gi|337743319|gb|AEI73156.1| MSH6 [Kryptolebias marmoratus]
Length = 222
Score = 78.6 bits (192), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 46/59 (77%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+SL TPVDR+FTR+GA D + +ST+ EL+E+ +I+ HA+K+SL L+DEL
Sbjct: 42 GCYVPAESLRFTPVDRVFTRLGASDRIMAGESTFYVELSETASILHHATKHSLVLLDEL 100
>gi|348507016|ref|XP_003441053.1| PREDICTED: DNA mismatch repair protein Msh6 [Oreochromis niloticus]
Length = 1381
Score = 78.6 bits (192), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 46/59 (77%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC +PA+SL TPVDR+FTR+GA D + +ST+ EL+E+ +I+ HA+K+SL L+DEL
Sbjct: 1178 GCYIPAESLRFTPVDRVFTRLGASDRIMAGESTFFVELSETSSILHHATKHSLVLLDEL 1236
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 52/88 (59%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD L NL + N TEGTL+E+LD C T FGKR+L+ L PL N +I+ R DA
Sbjct: 751 VLDGVTLVNLEIFQNGSGGTEGTLLERLDTCSTPFGKRLLKQWLCAPLCNPTSIRDRLDA 810
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ L+ + ++ +K L DLER+L
Sbjct: 811 VEDLMGAQAQATEVSDLLKKLPDLERLL 838
>gi|198435135|ref|XP_002126574.1| PREDICTED: similar to MGC85188 protein [Ciona intestinalis]
Length = 1307
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 1/100 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILDS L+NL ++ NS EGTL+E+LD+C T FGKR+L+ L P N D I R DA
Sbjct: 685 ILDSVTLSNLEIIYNSKGEREGTLLERLDNCRTPFGKRLLKQWLCLPPCNPDVINDRLDA 744
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCR 100
+ ++ + + + M+ + DLERML + LS +G R
Sbjct: 745 VDDIMSNNDLLSPLFSSMRKMPDLERMLSNIHSLS-KGAR 783
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+S +TP DRIFTR+GA D + +ST+ EL+E+ +I++HA+K SL L+DEL
Sbjct: 1106 GCYVPAESCRMTPCDRIFTRLGASDRIMTGESTFYVELSETYSILKHATKNSLVLLDEL 1164
>gi|12846234|dbj|BAB27085.1| unnamed protein product [Mus musculus]
Length = 444
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTPVDR+FTR+GA D + +ST+ EL+E+ +I+RHA+ +SL LVDEL
Sbjct: 241 GCYVPAEKCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILRHATAHSLVLVDEL 299
>gi|398835115|ref|ZP_10592492.1| DNA mismatch repair protein MutS [Herbaspirillum sp. YR522]
gi|398217306|gb|EJN03824.1| DNA mismatch repair protein MutS [Herbaspirillum sp. YR522]
Length = 912
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 51/65 (78%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA S T+ P+DRIFTR+GA D+L+G +ST++ E+TES I+ +AS++SL
Sbjct: 670 TLLAYVGSFVPASSATIGPIDRIFTRIGAADDLAGGRSTFMVEMTESAAILNNASEHSLV 729
Query: 152 LVDEL 156
L+DE+
Sbjct: 730 LMDEV 734
Score = 37.0 bits (84), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 21/70 (30%), Positives = 35/70 (50%), Gaps = 1/70 (1%)
Query: 18 NTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAK 77
N TL LDHC T+ G R+LR L L + ++R A++ L+ + + A
Sbjct: 319 NALSPTLFSTLDHCRTAMGSRLLRHWLHHALRDQSVARERHAAVNALM-RADACSGLSAT 377
Query: 78 MKDLRDLERM 87
+ + D+ER+
Sbjct: 378 LAAVPDIERI 387
>gi|340786874|ref|YP_004752339.1| DNA mismatch repair protein MutS [Collimonas fungivorans Ter331]
gi|340552141|gb|AEK61516.1| DNA mismatch repair protein MutS [Collimonas fungivorans Ter331]
Length = 880
Score = 78.6 bits (192), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 35/65 (53%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS L P+DRIFTR+GA D+L+G +ST++ E+TES I+ AS+ SL
Sbjct: 647 TLLAYVGSYVPADSAVLGPIDRIFTRIGAADDLAGGRSTFMVEMTESAAILNGASENSLV 706
Query: 152 LVDEL 156
L+DE+
Sbjct: 707 LMDEV 711
>gi|432906031|ref|XP_004077496.1| PREDICTED: DNA mismatch repair protein Msh6-like [Oryzias latipes]
Length = 1381
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 46/59 (77%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+SL TPVDR+FTR+GA D + +ST+ EL+E+ +I+ HA+K+SL L+DEL
Sbjct: 1178 GCYVPAESLRFTPVDRVFTRLGASDRIMAGESTFFVELSETASILHHATKHSLVLLDEL 1236
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 40/88 (45%), Positives = 52/88 (59%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD LANL + N TEGTL+E+LD C T FGKR+L+ L PL N AIK R DA
Sbjct: 751 VLDGVTLANLEIFQNGSGRTEGTLLERLDTCSTPFGKRLLKQWLCAPLCNPTAIKDRLDA 810
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ L+ + + +K L DLER+L
Sbjct: 811 LEDLMGAQAQATEAAELLKKLPDLERLL 838
>gi|351695606|gb|EHA98524.1| DNA mismatch repair protein Msh6 [Heterocephalus glaber]
Length = 1363
Score = 78.2 bits (191), Expect = 1e-12, Method: Composition-based stats.
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ GC VPA+ LTPVDR+FTR+GA D + +ST+ EL+E+ +I+RHA+ +SL
Sbjct: 1154 TVMAQMGCYVPAEVCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILRHATGHSLV 1213
Query: 152 LVDEL 156
LVDEL
Sbjct: 1214 LVDEL 1218
Score = 72.0 bits (175), Expect = 9e-11, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL V N N +TEGTL+E++D C T FGKR+L+ L PL + AI R D
Sbjct: 737 VLDAVTLNNLEVFLNGTNGSTEGTLLERIDTCYTPFGKRLLKQWLCAPLCSPFAINDRLD 796
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L+D ++ +K L DLER+L
Sbjct: 797 AVEDLMDVPDKISEVADLLKKLPDLERLL 825
>gi|148706690|gb|EDL38637.1| mCG15886 [Mus musculus]
Length = 1379
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTPVDR+FTR+GA D + +ST+ EL+E+ +I+RHA+ +SL LVDEL
Sbjct: 1176 GCYVPAEKCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILRHATAHSLVLVDEL 1234
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E+LD C T FGKR+L+ L PL + AI R D
Sbjct: 752 VLDAVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLKQWLCAPLCSPSAISDRLD 811
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L+ ++ +K L DLER+L
Sbjct: 812 AVEDLMAVPDKVTEVADLLKKLPDLERLL 840
>gi|126667870|ref|ZP_01738836.1| DNA mismatch repair protein [Marinobacter sp. ELB17]
gi|126627686|gb|EAZ98317.1| DNA mismatch repair protein [Marinobacter sp. ELB17]
Length = 862
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 50/65 (76%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPADS L PVDRIFTRMG+ D+++G +ST++ E+TE+ I+ +A+K+SL
Sbjct: 621 ALLAYTGSFVPADSAVLGPVDRIFTRMGSSDDIAGGRSTFMVEMTETANILHNATKHSLV 680
Query: 152 LVDEL 156
L+DE+
Sbjct: 681 LMDEV 685
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ + NL + TN T+ TL +D T+ G R LR L +PL ++ ++QRQ A
Sbjct: 256 ILDAASRRNLEIDTNLMGGTQYTLAWVMDRTATAMGGRQLRRWLNRPLRDVAVVRQRQQA 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+S LL + E + ++K + D+ER+L
Sbjct: 316 VSALL-KDFDYEPIHDQLKSIGDIERIL 342
>gi|6754744|ref|NP_034960.1| DNA mismatch repair protein Msh6 [Mus musculus]
gi|341940990|sp|P54276.3|MSH6_MOUSE RecName: Full=DNA mismatch repair protein Msh6; AltName: Full=G/T
mismatch-binding protein; Short=GTBP; Short=GTMBP;
AltName: Full=MutS-alpha 160 kDa subunit; AltName:
Full=p160
gi|2665637|gb|AAB88445.1| mismatch repair protein MSH6 [Mus musculus]
gi|30109297|gb|AAH51160.1| MutS homolog 6 (E. coli) [Mus musculus]
gi|30185718|gb|AAH51634.1| MutS homolog 6 (E. coli) [Mus musculus]
Length = 1358
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTPVDR+FTR+GA D + +ST+ EL+E+ +I+RHA+ +SL LVDEL
Sbjct: 1155 GCYVPAEKCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILRHATAHSLVLVDEL 1213
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E+LD C T FGKR+L+ L PL + AI R D
Sbjct: 731 VLDAVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLKQWLCAPLCSPSAISDRLD 790
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L+ ++ +K L DLER+L
Sbjct: 791 AVEDLMAVPDKVTEVADLLKKLPDLERLL 819
>gi|302773165|ref|XP_002970000.1| hypothetical protein SELMODRAFT_410679 [Selaginella moellendorffii]
gi|300162511|gb|EFJ29124.1| hypothetical protein SELMODRAFT_410679 [Selaginella moellendorffii]
Length = 1232
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 62/93 (66%), Gaps = 8/93 (8%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LDS AL NL +L NS N GTL+ LDHC+T FG+R+L+ +V+PL N+++I QRQ+
Sbjct: 588 VLDSAALDNLEILENSSNCGVAGTLLCLLDHCITPFGRRLLKQWIVRPLCNIESIVQRQN 647
Query: 60 AISVLLDQKHITE----QMRAKMKDLRDLERML 88
A+ +D + + E + R ++ + DLER+L
Sbjct: 648 AV---VDMQGVAENAVSEFRRELFGIPDLERLL 677
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 40/59 (67%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA+SL L+ DR+F RMGAKD + QST+L EL E+ ++R A++ S +DEL
Sbjct: 990 GSEVPAESLELSLTDRLFVRMGAKDQIMTGQSTFLIELLETAVMLRCATQNSFVALDEL 1048
>gi|1817725|gb|AAC53034.1| G/T-mismatch binding protein [Mus musculus]
Length = 1358
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTPVDR+FTR+GA D + +ST+ EL+E+ +I+RHA+ +SL LVDEL
Sbjct: 1155 GCYVPAEKCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILRHATAHSLVLVDEL 1213
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEG L+E+LD C T FGKR+L+ L PL + AI R D
Sbjct: 731 VLDAVTLNNLEIFLNGTNGSTEGNLLERLDTCHTPFGKRLLKQWLCAPLCSPSAISDRLD 790
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L+ + ++ +K L DLER+L
Sbjct: 791 AVEDLMAVPYKVTEVADLLKKLPDLERLL 819
>gi|399545598|ref|YP_006558906.1| DNA mismatch repair protein mutS [Marinobacter sp. BSs20148]
gi|399160930|gb|AFP31493.1| DNA mismatch repair protein mutS [Marinobacter sp. BSs20148]
Length = 875
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 50/65 (76%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPADS L PVDRIFTRMG+ D+++G +ST++ E+TE+ I+ +A+K+SL
Sbjct: 634 ALLAYTGSFVPADSAVLGPVDRIFTRMGSSDDIAGGRSTFMVEMTETANILHNATKHSLV 693
Query: 152 LVDEL 156
L+DE+
Sbjct: 694 LMDEV 698
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ + NL + TN T+ TL +D T+ G R LR L +PL ++ ++QRQ A
Sbjct: 269 IMDAASRRNLEIDTNLMGGTQYTLAWVMDRTATAMGGRQLRRWLNRPLRDVAVVRQRQQA 328
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+S LL + E + ++K + D+ER+L
Sbjct: 329 VSALL-KDFDCEPIHDQLKSIGDIERIL 355
>gi|26353224|dbj|BAC40242.1| unnamed protein product [Mus musculus]
Length = 1358
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTPVDR+FTR+GA D + +ST+ EL+E+ +I+RHA+ +SL LVDEL
Sbjct: 1155 GCYVPAEKCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILRHATAHSLVLVDEL 1213
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E+LD C T FGKR+L+ L PL + AI R D
Sbjct: 731 VLDAVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLKQWLCAPLCSPSAISDRLD 790
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L+ ++ +K L DLER+L
Sbjct: 791 AVEDLMAVPDKVTEVADLLKKLPDLERLL 819
>gi|156549300|ref|XP_001600292.1| PREDICTED: probable DNA mismatch repair protein Msh6 [Nasonia
vitripennis]
Length = 1151
Score = 78.2 bits (191), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA LT VDRIFTR+GA D++ QST+L EL+E+ I++HA+KYSL L+DEL
Sbjct: 949 GCHVPATDCNLTLVDRIFTRLGANDDIMAGQSTFLVELSETSAILQHATKYSLVLLDEL 1007
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 58/88 (65%), Gaps = 5/88 (5%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ + NL VL N EG+LI+ LD+C T+FGKR+LR + +P I +RQ+A
Sbjct: 552 VLDAMTITNLRVLGN-----EGSLIKTLDNCCTAFGKRLLREWVCRPSCRKSVIVERQNA 606
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I+ L+D + +++R+K+ L DLER+L
Sbjct: 607 ITELIDNPDVVQEVRSKLSGLPDLERLL 634
>gi|224128348|ref|XP_002320307.1| predicted protein [Populus trichocarpa]
gi|222861080|gb|EEE98622.1| predicted protein [Populus trichocarpa]
Length = 1288
Score = 77.8 bits (190), Expect = 1e-12, Method: Composition-based stats.
Identities = 43/91 (47%), Positives = 62/91 (68%), Gaps = 4/91 (4%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD+ AL NL + NS N T GTL QL+HCVT+FGKR+L+ L +PL +L++IK RQD
Sbjct: 637 ILDAAALENLEIFENSRNGDTSGTLYAQLNHCVTAFGKRLLKTWLARPLYHLESIKDRQD 696
Query: 60 AISVL--LDQKHITEQMRAKMKDLRDLERML 88
A++ L ++Q + E + + L D+ER+L
Sbjct: 697 AVAGLRGVNQPMMLEFQKV-LSGLPDIERLL 726
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 84 LERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMR 143
L R + + L+ G VPA+S L+PVDRIF RMGAKD++ QST+L EL+E+ ++
Sbjct: 1049 LLRQVCLAVILAQIGADVPAESFELSPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLS 1108
Query: 144 HASKYSLALVDEL 156
A+ SL +DEL
Sbjct: 1109 SATCNSLVALDEL 1121
>gi|301611818|ref|XP_002935421.1| PREDICTED: DNA mismatch repair protein Msh6 [Xenopus (Silurana)
tropicalis]
Length = 1338
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 47/59 (79%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+S LTPVDR+FTR+GA D + +ST+ EL+E+ +I++HA+++SL L+DEL
Sbjct: 1137 GCYVPAESCRLTPVDRVFTRLGASDRIMAGESTFFVELSETSSILQHATEHSLVLLDEL 1195
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL +L N N +TEGTL+E+LD C T FGKR+L+ L PL N +I R +
Sbjct: 712 VLDGVTLTNLEILQNGTNGSTEGTLLEKLDTCSTPFGKRLLKQWLCAPLCNPFSINDRLN 771
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L+D ++ +K L DLER+L
Sbjct: 772 AVEDLMDLPDKVSEVSDLLKKLPDLERLL 800
>gi|405958979|gb|EKC25057.1| DNA mismatch repair protein Msh6 [Crassostrea gigas]
Length = 1346
Score = 77.8 bits (190), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ GC VPA+ LTPVDR+FTR+GA D + +ST+ EL+E+ I++HA+K+SL
Sbjct: 1142 TVMAQMGCYVPAEKCRLTPVDRVFTRLGASDRIMSGESTFYVELSETAAILQHATKHSLV 1201
Query: 152 LVDEL 156
L+DEL
Sbjct: 1202 LIDEL 1206
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 69/137 (50%), Gaps = 6/137 (4%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD L NL V + + EGTL+ +L+ CVT FGKR+ + L PL N +I R +A
Sbjct: 721 VLDGLTLRNLDV-ADLYGSQEGTLLSRLNQCVTPFGKRLFKQWLCAPLCNPSSINDRLNA 779
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQG---CRVPADSLTLTPVDRIFTR 117
+ L I ++ ++ L DLER+L S F S C+ DS + + +++
Sbjct: 780 VEDLNVVPDIMAEVIDMIRKLPDLERIL--SKFHSLGSAARCKTHPDSRAIFFDEAKYSK 837
Query: 118 MGAKDNLSGAQSTYLAE 134
+D LS + +A+
Sbjct: 838 KKIEDFLSTIEGFKVAQ 854
>gi|393243806|gb|EJD51320.1| DNA mismatch repair protein Msh6 [Auricularia delicata TFB-10046
SS5]
Length = 1110
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 51/88 (57%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD LA+L VL+NSD T EG+L++ L CVT FGKR+ R L PL I R DA
Sbjct: 510 LLDGQTLAHLEVLSNSDGTAEGSLLDLLGRCVTPFGKRLFRMWLCAPLREAATINDRLDA 569
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ L+D EQ K + DLER+L
Sbjct: 570 VEDLMDHPSSAEQFAKLAKGVPDLERLL 597
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 44/73 (60%)
Query: 84 LERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMR 143
L RM + ++ G +PADS ++PVD I TRMGA DN+ ST+ EL E I++
Sbjct: 875 LMRMTAAGVIMAQLGMLLPADSARISPVDAIMTRMGAYDNMFSNSSTFKVELDECCKILK 934
Query: 144 HASKYSLALVDEL 156
AS SL ++DEL
Sbjct: 935 EASPKSLVILDEL 947
>gi|330800615|ref|XP_003288330.1| hypothetical protein DICPUDRAFT_55353 [Dictyostelium purpureum]
gi|325081628|gb|EGC35137.1| hypothetical protein DICPUDRAFT_55353 [Dictyostelium purpureum]
Length = 979
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L NL + NS D TTEGTL + +D CVTSFGKR+ R + +PL N + I RQ
Sbjct: 379 ILDGQCLVNLEIFNNSTDGTTEGTLFKLMDRCVTSFGKRLFRQWICRPLANKERIVDRQR 438
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L D +++ + + + DLERML
Sbjct: 439 AIEHLRDNPDHLQKVISILTKIPDLERML 467
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC V A S ++ VDRIFTR+GA DN+ QST++ EL E+ +++++A+ SL ++DEL
Sbjct: 764 GCFVSASSCEMSIVDRIFTRLGANDNILAGQSTFMVELQETCSVLKYATNRSLVILDEL 822
>gi|242011381|ref|XP_002426429.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212510534|gb|EEB13691.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1265
Score = 77.4 bits (189), Expect = 2e-12, Method: Composition-based stats.
Identities = 39/88 (44%), Positives = 58/88 (65%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILDS L NL V+ NS+ GTL+E+LDHC T GKR+LR + PL ++ I RQ A
Sbjct: 658 ILDSLTLENLEVINNSNGEKHGTLLEKLDHCCTFTGKRLLRQWICTPLCSISGITSRQKA 717
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I + L +K + +++++ +K + DLER+L
Sbjct: 718 I-IELSEKGVIKKIKSMLKGVPDLERLL 744
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 53/73 (72%)
Query: 84 LERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMR 143
L R L T ++ G +VPA++ L P+DRIFTR+GAKD++ +ST+ EL+E+ I+
Sbjct: 1052 LMRQLGLITIMAQMGLKVPAETCKLIPIDRIFTRIGAKDDILAGESTFYVELSEASMILN 1111
Query: 144 HASKYSLALVDEL 156
+A+++SLAL+DEL
Sbjct: 1112 NATQFSLALIDEL 1124
>gi|449496462|ref|XP_002196049.2| PREDICTED: DNA mismatch repair protein Msh6 [Taeniopygia guttata]
Length = 1359
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 47/59 (79%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA++ LTP+DR+FTR+GA D + +ST+ EL+E+ +I++HA+++SL LVDEL
Sbjct: 1156 GCYVPAEACRLTPIDRVFTRLGASDRIMAGESTFFVELSETSSILQHATEHSLVLVDEL 1214
Score = 75.1 bits (183), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL VL N N +TEGTL+E++D C T FGKR+L+ L PL N +I R D
Sbjct: 733 VLDGVTLMNLEVLQNGTNGSTEGTLLERIDSCCTPFGKRLLKQWLCAPLCNPKSINDRLD 792
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ LL ++ +K L DLER+L
Sbjct: 793 AVEDLLAVPDKMSEVSEYLKKLPDLERLL 821
>gi|326437890|gb|EGD83460.1| hypothetical protein PTSG_04067 [Salpingoeca sp. ATCC 50818]
Length = 1327
Score = 77.4 bits (189), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+S TLTPVDRIFTR+GA DN+ +ST++ EL E+ TI+ A+ SL ++DEL
Sbjct: 1087 GCWVPAESFTLTPVDRIFTRIGANDNIVAGRSTFMVELKETATILNKATSSSLVILDEL 1145
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTN-SDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
++D L NL VL N D TT G+L+E L C T+FGKRM R L PL ++ I +RQ+
Sbjct: 712 VIDGQTLQNLDVLCNMQDGTTSGSLLELLCQCHTAFGKRMFRRWLCHPLRRVNDITERQN 771
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L + + + + + +K L DLER+L
Sbjct: 772 AVVDLTEHVDLRDALSSMLKPLPDLERLL 800
>gi|152997735|ref|YP_001342570.1| DNA mismatch repair protein MutS [Marinomonas sp. MWYL1]
gi|189083158|sp|A6W1Q6.1|MUTS_MARMS RecName: Full=DNA mismatch repair protein MutS
gi|150838659|gb|ABR72635.1| DNA mismatch repair protein MutS [Marinomonas sp. MWYL1]
Length = 883
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 51/65 (78%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L+ GC VPA+S +++ VDRIFTRMG+ D+L+G +ST++ E+TE+ I+ +ASK SL
Sbjct: 636 TLLAHTGCFVPAESASISVVDRIFTRMGSSDDLAGGRSTFMVEMTETANILNNASKNSLV 695
Query: 152 LVDEL 156
L+DE+
Sbjct: 696 LMDEV 700
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D NL + N T TL+E LD C T G R+L+ L P+ +L+ I+ RQ
Sbjct: 271 LIDGATRRNLEIDINLTGGTSNTLVEVLDKCSTPMGSRLLKRWLHTPIRDLNEIQARQQV 330
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
++ L Q A +K + DLER+L
Sbjct: 331 VAE-LQQNQSYNAFEAPLKKVGDLERIL 357
>gi|348574694|ref|XP_003473125.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh6-like
[Cavia porcellus]
Length = 1354
Score = 77.0 bits (188), Expect = 2e-12, Method: Composition-based stats.
Identities = 33/59 (55%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTPVDR+FTR+GA D + +ST+ EL+E+ +I+RHA+ +SL LVDEL
Sbjct: 1153 GCYVPAEMCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILRHATAHSLVLVDEL 1211
Score = 71.2 bits (173), Expect = 1e-10, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL + AI R D
Sbjct: 730 VLDAVTLNNLEIFLNGTNGSTEGTLLERIDTCYTPFGKRLLKQWLCAPLCSPFAINDRLD 789
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L+D ++ +K L DLER+L
Sbjct: 790 AVEDLMDVPDKISEVTDLLKKLPDLERLL 818
>gi|300123248|emb|CBK24521.2| unnamed protein product [Blastocystis hominis]
Length = 1265
Score = 77.0 bits (188), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 56/88 (63%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ L NL +L + N + +L + +DH VT FGKR+L+ L KPL +DAI +R DA
Sbjct: 638 ILDAITLRNLDILPDPSNPSTNSLFQYIDHTVTPFGKRLLKEWLCKPLYQIDAINKRLDA 697
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ L+ + HI++ + K + D++R+L
Sbjct: 698 VEELISKTHISQLITTSFKGIVDVDRLL 725
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 46/71 (64%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
R + S L+ GC VPA + L+PVDRIFTR+GA+D + QST+ EL E+ I+ +
Sbjct: 1049 RQVAVSIILAQIGCFVPASYMRLSPVDRIFTRIGAQDRILSNQSTFYVELIETSLILSNC 1108
Query: 146 SKYSLALVDEL 156
++ S ++DEL
Sbjct: 1109 TEDSFLIIDEL 1119
>gi|408389823|gb|EKJ69247.1| hypothetical protein FPSE_10585 [Fusarium pseudograminearum CS3096]
Length = 1210
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L NL V +NS N +EGTL L+ CVT FGKR+ R+ + PL N+D I +R D
Sbjct: 621 ILDGQTLINLEVFSNSVNGGSEGTLFSLLNKCVTPFGKRLFRSWVAHPLCNIDRINERLD 680
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L + + EQ +++ + DLER++
Sbjct: 681 AVEMLNADQTVREQFASQLVKMPDLERLI 709
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 997 GCYVPATFARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1055
>gi|125605646|gb|EAZ44682.1| hypothetical protein OsJ_29308 [Oryza sativa Japonica Group]
Length = 1293
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTNSDNTT-EGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD+ AL NL +L N+ N GTL QL+HCVT FGKR+L+ + +PL AI QRQ
Sbjct: 657 ILDAAALENLEILENARNGGLSGTLYAQLNHCVTGFGKRLLKRWIARPLYERQAILQRQS 716
Query: 60 AISVLLDQKH-ITEQMRAKMKDLRDLERML 88
AI+ H Q R + L D+ER+L
Sbjct: 717 AIATFKGSGHECAIQFRKDLSRLPDMERLL 746
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA+S L+ VDR+F RMGA+D++ QST+L EL E+ +++ A+K SL +DEL
Sbjct: 1067 GANVPAESFELSLVDRMFVRMGARDHIMAGQSTFLVELMETASVLSSATKNSLVALDEL 1125
>gi|125563676|gb|EAZ09056.1| hypothetical protein OsI_31317 [Oryza sativa Indica Group]
Length = 1265
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTNSDNTT-EGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD+ AL NL +L N+ N GTL QL+HCVT FGKR+L+ + +PL AI QRQ
Sbjct: 629 ILDAAALENLEILENARNGGLSGTLYAQLNHCVTGFGKRLLKRWIARPLYERQAILQRQS 688
Query: 60 AISVLLDQKH-ITEQMRAKMKDLRDLERML 88
AI+ H Q R + L D+ER+L
Sbjct: 689 AIATFKGSGHECAIQFRKDLSRLPDMERLL 718
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA+S L+ VDR+F RMGA+D++ QST+L EL E+ +++ A+K SL +DEL
Sbjct: 1039 GANVPAESFELSLVDRMFVRMGARDHIMAGQSTFLVELMETASVLSSATKNSLVALDEL 1097
>gi|342876461|gb|EGU78072.1| hypothetical protein FOXB_11416 [Fusarium oxysporum Fo5176]
Length = 1228
Score = 77.0 bits (188), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L NL V +NS N +EGTL L+ CVT FGKR+ R+ + PL N+D I +R D
Sbjct: 639 ILDGQTLINLEVFSNSVNGGSEGTLFSLLNKCVTPFGKRLFRSWVAHPLCNIDRINERLD 698
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L + + EQ +++ + DLER++
Sbjct: 699 AVEMLNADQTVREQFASQLVKMPDLERLI 727
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 1015 GCYVPATFARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1073
>gi|46126343|ref|XP_387725.1| hypothetical protein FG07549.1 [Gibberella zeae PH-1]
Length = 1210
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L NL V +NS N +EGTL L+ CVT FGKR+ R+ + PL N+D I +R D
Sbjct: 621 ILDGQTLINLEVFSNSVNGGSEGTLFSLLNKCVTPFGKRLFRSWVAHPLCNIDRINERLD 680
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L + + EQ +++ + DLER++
Sbjct: 681 AVEMLNADQTVREQFASQLVKMPDLERLI 709
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 42/59 (71%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 997 GCYVPATFARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1055
>gi|293347880|ref|XP_002726765.1| PREDICTED: DNA mismatch repair protein Msh6-like [Rattus norvegicus]
gi|149050458|gb|EDM02631.1| rCG61559 [Rattus norvegicus]
Length = 1361
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTPVDR+FTR+GA D + +ST+ EL+E+ +I+RHA+ +SL LVDEL
Sbjct: 1158 GCYVPAELCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILRHATAHSLVLVDEL 1216
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L+NL + N N +TEGTL+E+LD C T FGKR+L+ L PL + AI R D
Sbjct: 734 VLDAVTLSNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLKQWLCAPLCSPSAISDRLD 793
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 794 AIEDLMAVPDKVAEVADLLKKLPDLERLL 822
>gi|51091506|dbj|BAD36244.1| putative mismatch binding protein Mus3 [Oryza sativa Japonica
Group]
gi|51091562|dbj|BAD36299.1| putative mismatch binding protein Mus3 [Oryza sativa Japonica
Group]
Length = 1253
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTNSDNTT-EGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD+ AL NL +L N+ N GTL QL+HCVT FGKR+L+ + +PL AI QRQ
Sbjct: 617 ILDAAALENLEILENARNGGLSGTLYAQLNHCVTGFGKRLLKRWIARPLYERQAILQRQS 676
Query: 60 AISVLLDQKH-ITEQMRAKMKDLRDLERML 88
AI+ H Q R + L D+ER+L
Sbjct: 677 AIATFKGSGHECAIQFRKDLSRLPDMERLL 706
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 42/59 (71%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA+S L+ VDR+F RMGA+D++ QST+L EL E+ +++ A+K SL +DEL
Sbjct: 1027 GANVPAESFELSLVDRMFVRMGARDHIMAGQSTFLVELMETASVLSSATKNSLVALDEL 1085
>gi|392348628|ref|XP_002729643.2| PREDICTED: DNA mismatch repair protein Msh6-like [Rattus norvegicus]
Length = 1361
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTPVDR+FTR+GA D + +ST+ EL+E+ +I+RHA+ +SL LVDEL
Sbjct: 1158 GCYVPAELCRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILRHATAHSLVLVDEL 1216
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L+NL + N N +TEGTL+E+LD C T FGKR+L+ L PL + AI R D
Sbjct: 734 VLDAVTLSNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLKQWLCAPLCSPSAISDRLD 793
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 794 AIEDLMAVPDKVAEVADLLKKLPDLERLL 822
>gi|449436747|ref|XP_004136154.1| PREDICTED: DNA mismatch repair protein MSH6-like [Cucumis sativus]
Length = 1307
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ AL NL + NS N + GTL QL+HCVT+FGKR+L+ L +PL ++++I+ RQ
Sbjct: 668 VLDAAALENLEIFENSRNGDSSGTLYSQLNHCVTAFGKRLLKTWLARPLYHVESIEARQG 727
Query: 60 AISVLL-DQKHITEQMRAKMKDLRDLERML 88
A++ L D + + R + L D+ER+L
Sbjct: 728 AVASLRGDNLSFSLEFRKALSKLPDMERLL 757
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 45/66 (68%)
Query: 91 STFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSL 150
S L+ G VPA+S L PVDRIF RMGA+D + QST+L EL+E+ ++ A++ S+
Sbjct: 1070 SVILAQIGADVPAESFELAPVDRIFVRMGARDQIMSGQSTFLTELSETALMLSSATRNSV 1129
Query: 151 ALVDEL 156
++DEL
Sbjct: 1130 VILDEL 1135
>gi|147861780|emb|CAN78918.1| hypothetical protein VITISV_032225 [Vitis vinifera]
Length = 1349
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 39/90 (43%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ AL NL + NS + GTL QL+HCVT+FGKR+L+ L +PL +LD+I++RQD
Sbjct: 661 VLDAAALENLEIFENSRKGDSSGTLYAQLNHCVTAFGKRLLKTWLARPLYHLDSIRERQD 720
Query: 60 AISVLLDQKHITE-QMRAKMKDLRDLERML 88
A++ L + + R ++ L D+ER+L
Sbjct: 721 AVAGLRGVNLPSALEFRKELSRLPDMERLL 750
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 35/73 (47%), Positives = 49/73 (67%)
Query: 84 LERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMR 143
L R + + L+ G VPA+S L+PVDRIF RMGAKDN+ QST+L EL+E+ +++
Sbjct: 1102 LLRQVCLAVILAQVGADVPAESFELSPVDRIFVRMGAKDNIMAGQSTFLTELSETASMLT 1161
Query: 144 HASKYSLALVDEL 156
A+ SL +DEL
Sbjct: 1162 SATCNSLVALDEL 1174
>gi|341900974|gb|EGT56909.1| CBN-MSH-6 protein [Caenorhabditis brenneri]
Length = 1193
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L+ GC VPADS+ LTP+DRIFTR+GA D + +ST+ EL E++ ++++A+K+SL L+
Sbjct: 988 LAHLGCMVPADSMRLTPIDRIFTRIGANDRIMCGESTFFIELKETDIMLKNATKHSLLLI 1047
Query: 154 DEL 156
DEL
Sbjct: 1048 DEL 1050
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD TAL NL+++ N ++ +L ++ C T FG+R+LR+ L++P + ++ RQ+A
Sbjct: 565 ILDGTALENLNIVPNGRDSHLTSLYFVINKCSTPFGRRLLRSWLLQPTCDPTKLRLRQEA 624
Query: 61 ISVLL--DQKHITEQMRAKMKDLRDLERML 88
I + D + A +K + DL+R+L
Sbjct: 625 IKWMTSSDATSFVDIATATLKKIPDLDRLL 654
>gi|33504503|ref|NP_878280.1| DNA mismatch repair protein Msh6 [Danio rerio]
gi|27882481|gb|AAH44350.1| MutS homolog 6 (E. coli) [Danio rerio]
Length = 1369
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 46/59 (77%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+SL LTPVDR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL L+DEL
Sbjct: 1166 GCYVPAESLRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILLHATNHSLVLLDEL 1224
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSD-NTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD LANL +L NS EGTL+E+LD C T FGKR+L+ + PL NL +I R D
Sbjct: 735 VLDGVTLANLEILQNSSTGGPEGTLLERLDTCCTPFGKRLLKQWICAPLCNLSSIGDRLD 794
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L+ T ++ +K L DLER+L
Sbjct: 795 ALEDLMGAPSQTSEVTDLLKKLPDLERLL 823
>gi|444321562|ref|XP_004181437.1| hypothetical protein TBLA_0F03840 [Tetrapisispora blattae CBS 6284]
gi|387514481|emb|CCH61918.1| hypothetical protein TBLA_0F03840 [Tetrapisispora blattae CBS 6284]
Length = 1256
Score = 76.6 bits (187), Expect = 3e-12, Method: Composition-based stats.
Identities = 42/89 (47%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L NL + NS D + +GTL + L+ VT GKRMLR ++ PL N AI+QRQD
Sbjct: 635 ILDGVTLQNLEIFANSFDGSDKGTLFKLLNQGVTPMGKRMLRKWVIHPLFNKSAIEQRQD 694
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
+I +LL + E +K+ L DLERML
Sbjct: 695 SIELLLSDMELRELFESKLSVLPDLERML 723
Score = 61.6 bits (148), Expect = 1e-07, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 45/71 (63%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + ++ GC VP + LT +DRI TR+GA DN+ +ST+ EL+E++ I+ A
Sbjct: 1013 RMTCIAVIMAQLGCWVPCEEAELTSIDRIMTRLGANDNIMQGKSTFFVELSETKKILDTA 1072
Query: 146 SKYSLALVDEL 156
+ SL +VDEL
Sbjct: 1073 TNRSLLVVDEL 1083
>gi|15625580|gb|AAL04170.1|AF412834_1 mismatch repair protein Msh6 [Danio rerio]
Length = 1369
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 46/59 (77%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+SL LTPVDR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL L+DEL
Sbjct: 1166 GCYVPAESLRLTPVDRVFTRLGASDRIMSGESTFFVELSETASILLHATNHSLVLLDEL 1224
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSD-NTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD LANL +L NS EGTL+E+LD C T FGKR+L+ + PL N +I R D
Sbjct: 735 VLDGVTLANLEILQNSSTGGPEGTLLERLDTCCTPFGKRLLKQWICAPLCNPSSIGDRLD 794
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L+ T ++ +K L DLER+L
Sbjct: 795 ALEDLMGAPSQTSEVTDLLKKLPDLERLL 823
>gi|341882591|gb|EGT38526.1| hypothetical protein CAEBREN_00497 [Caenorhabditis brenneri]
Length = 1144
Score = 76.6 bits (187), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 49/63 (77%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L+ GC VPADS+ LTP+DRIFTR+GA D + +ST+ EL E++ ++++A+K+SL L+
Sbjct: 939 LAHLGCMVPADSMRLTPIDRIFTRIGANDRIMCGESTFFIELKETDIMLKNATKHSLLLI 998
Query: 154 DEL 156
DEL
Sbjct: 999 DEL 1001
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD TAL NL+++ N ++ +L ++ C T FG+R+LR+ L++P + ++ RQ+A
Sbjct: 530 ILDGTALENLNIVPNGRDSHLTSLYFVINKCSTPFGRRLLRSWLLQPTCDPTKLRLRQEA 589
Query: 61 ISVLL--DQKHITEQMRAKMKDLRDLERML 88
I + D + A +K + DL+R+L
Sbjct: 590 IKWMTSSDATSFVDIATATLKKIPDLDRLL 619
>gi|400602832|gb|EJP70430.1| MutS domain V [Beauveria bassiana ARSEF 2860]
Length = 1206
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L NL + +NS N +EGTL + L+ C+T FGKR+ R + PL N+D I +R D
Sbjct: 617 ILDGQTLINLEIFSNSVNGGSEGTLFQLLNKCITPFGKRLFRQWVAHPLQNIDRINERLD 676
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L + EQ +++ + DLER++
Sbjct: 677 AVDMLNKDPSVREQFSSQLVKMPDLERLI 705
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S LTPVDRI +R+GA DN+ +QST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 993 GCYVPAISAKLTPVDRIMSRLGANDNIFASQSTFFVELSETKKILSEATPRSLVILDEL 1051
>gi|385787382|ref|YP_005818491.1| DNA mismatch repair protein MutS [Erwinia sp. Ejp617]
gi|310766654|gb|ADP11604.1| DNA mismatch repair protein MutS [Erwinia sp. Ejp617]
Length = 858
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 50/65 (76%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL
Sbjct: 638 TLMAYMGSFVPADEATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLV 697
Query: 152 LVDEL 156
L+DE+
Sbjct: 698 LMDEI 702
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L PL N I QRQ +
Sbjct: 275 IMDAATRRNLEITQNLAGGSENTLASVLDKTVTPMGSRMLKRWLHMPLRNTQTITQRQQS 334
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D +++ + ++ + DLER+L
Sbjct: 335 IRALQD---LSDNLPPLLRQVGDLERIL 359
>gi|297743972|emb|CBI36942.3| unnamed protein product [Vitis vinifera]
Length = 1237
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/90 (43%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ AL NL + NS + GTL QL+HCVT+FGKR+L+ L +PL +LD+I++RQD
Sbjct: 593 VLDAAALENLEIFENSRKGDSSGTLYAQLNHCVTAFGKRLLKTWLARPLYHLDSIRERQD 652
Query: 60 AISVLLDQKHITE-QMRAKMKDLRDLERML 88
A++ L + + R ++ L D+ER+L
Sbjct: 653 AVAGLRGVNLPSALEFRKELSRLPDMERLL 682
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/73 (47%), Positives = 49/73 (67%)
Query: 84 LERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMR 143
L R + + L+ G VPA+S L+PVDRIF RMGAKDN+ QST+L EL+E+ +++
Sbjct: 989 LLRQVCLAVILAQVGADVPAESFELSPVDRIFVRMGAKDNIMAGQSTFLTELSETASMLT 1048
Query: 144 HASKYSLALVDEL 156
A+ SL +DEL
Sbjct: 1049 SATCNSLVALDEL 1061
>gi|34499116|ref|NP_903331.1| DNA mismatch repair protein MutS [Chromobacterium violaceum ATCC
12472]
gi|44888170|sp|Q7NRW7.1|MUTS_CHRVO RecName: Full=DNA mismatch repair protein MutS
gi|34104967|gb|AAQ61323.1| DNA mismatch repair protein [Chromobacterium violaceum ATCC 12472]
Length = 873
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 50/65 (76%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L+ G VPADS + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ +AS++SL
Sbjct: 652 TLLAHVGSFVPADSAVIGPIDRIFTRIGASDDLAGGRSTFMVEMTETANILNNASEHSLV 711
Query: 152 LVDEL 156
L+DE+
Sbjct: 712 LMDEV 716
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 24/86 (27%), Positives = 40/86 (46%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL LD C TS G R+L L P+ N + +R A+
Sbjct: 291 MDAATRRNLELTETIRGEASPTLASLLDTCATSMGSRLLGHWLHHPMRNHGKLARRHGAV 350
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
LL + + + A++ + D+ER+
Sbjct: 351 RALLSR---YQDVHAELDQVSDIERI 373
>gi|384252001|gb|EIE25478.1| hypothetical protein COCSUDRAFT_40713 [Coccomyxa subellipsoidea
C-169]
Length = 874
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/71 (52%), Positives = 48/71 (67%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
R ++ L+ GC VPA S TLT DRIFTR+GA+D + QST+L E TE+ I+RHA
Sbjct: 644 RAAATAVILAQMGCPVPAASATLTVADRIFTRLGAQDRIVAGQSTFLVECTEAAAILRHA 703
Query: 146 SKYSLALVDEL 156
++ SL L DEL
Sbjct: 704 TQDSLVLCDEL 714
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 54/87 (62%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD L NL +L N++ TEG+L+ QLD C + G+R+LR L +PL ++ AI+QR DA
Sbjct: 304 LDGPTLTNLELLENTEGGTEGSLLAQLDTCASPGGRRLLRQWLCRPLLDVGAIEQRLDAA 363
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
++ + + + A ++ + DLER L
Sbjct: 364 DEIVKRPDLVTSLLATLRSMPDLERAL 390
>gi|225437545|ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Vitis vinifera]
Length = 1297
Score = 76.3 bits (186), Expect = 4e-12, Method: Composition-based stats.
Identities = 39/90 (43%), Positives = 60/90 (66%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ AL NL + NS + GTL QL+HCVT+FGKR+L+ L +PL +LD+I++RQD
Sbjct: 653 VLDAAALENLEIFENSRKGDSSGTLYAQLNHCVTAFGKRLLKTWLARPLYHLDSIRERQD 712
Query: 60 AISVLLDQKHITE-QMRAKMKDLRDLERML 88
A++ L + + R ++ L D+ER+L
Sbjct: 713 AVAGLRGVNLPSALEFRKELSRLPDMERLL 742
Score = 70.1 bits (170), Expect = 3e-10, Method: Composition-based stats.
Identities = 35/73 (47%), Positives = 49/73 (67%)
Query: 84 LERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMR 143
L R + + L+ G VPA+S L+PVDRIF RMGAKDN+ QST+L EL+E+ +++
Sbjct: 1049 LLRQVCLAVILAQVGADVPAESFELSPVDRIFVRMGAKDNIMAGQSTFLTELSETASMLT 1108
Query: 144 HASKYSLALVDEL 156
A+ SL +DEL
Sbjct: 1109 SATCNSLVALDEL 1121
>gi|395763447|ref|ZP_10444116.1| DNA mismatch repair protein MutS [Janthinobacterium lividum PAMC
25724]
Length = 896
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 50/65 (76%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA S T+ P+DRIFTR+GA D+L+G +ST++ E+TES I+ A+++SL
Sbjct: 658 TLLAYVGSYVPAASATIGPIDRIFTRIGATDDLAGGRSTFMVEMTESAAILNGATEHSLV 717
Query: 152 LVDEL 156
L+DE+
Sbjct: 718 LMDEV 722
Score = 39.7 bits (91), Expect = 0.38, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 39/86 (45%), Gaps = 1/86 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + TL LDHC T+ G RMLR L + + + R +AI
Sbjct: 288 LDAATRRNLELTETIRGQESPTLFSLLDHCRTAMGSRMLRHWLHHARRDQNVARARHEAI 347
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + A + + D+ER+
Sbjct: 348 AALA-QSEAAGPLAATLAQVPDIERI 372
>gi|445498588|ref|ZP_21465443.1| DNA mismatch repair protein MutS [Janthinobacterium sp. HH01]
gi|444788583|gb|ELX10131.1| DNA mismatch repair protein MutS [Janthinobacterium sp. HH01]
Length = 896
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 50/65 (76%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA S T+ P+DRIFTR+GA D+L+G +ST++ E+TES I+ A+++SL
Sbjct: 654 TLLAYVGSYVPATSATIGPIDRIFTRIGATDDLAGGRSTFMVEMTESAAILNGATEHSLV 713
Query: 152 LVDEL 156
L+DE+
Sbjct: 714 LMDEV 718
>gi|367048143|ref|XP_003654451.1| hypothetical protein THITE_2117497 [Thielavia terrestris NRRL 8126]
gi|347001714|gb|AEO68115.1| hypothetical protein THITE_2117497 [Thielavia terrestris NRRL 8126]
Length = 1231
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD +L NL V N+ N EGTL L+ C+T FGKR+ R + PL N+ I +R D
Sbjct: 637 ILDGQSLINLEVFANTVNGGPEGTLFSLLNRCITPFGKRLFRQWVCHPLCNIQKINERLD 696
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L+ + I +Q ++M + DLER++
Sbjct: 697 AVDMLIADRSILQQFSSQMAKMPDLERLI 725
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S LTP+DRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 1013 GCHVPAASARLTPIDRIMSRLGANDNIFAAQSTFFVELSETKKILAEATPRSLVILDEL 1071
>gi|336273106|ref|XP_003351308.1| MSH6 protein [Sordaria macrospora k-hell]
gi|380092828|emb|CCC09581.1| putative MSH6 protein [Sordaria macrospora k-hell]
Length = 1230
Score = 76.3 bits (186), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD +L NL + N+ N EGTL L+ C+T FGKR+ R + PL N+ + +R D
Sbjct: 637 ILDGQSLINLEIFANTANGGPEGTLFHLLNRCITPFGKRLFRQWVCHPLCNIQKLNERLD 696
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L D + EQ ++M + DLER++
Sbjct: 697 AVDMLNDDRSFQEQFSSQMSKMADLERLI 725
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 1013 GCYVPAMSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1071
>gi|256078665|ref|XP_002575615.1| hypothetical protein [Schistosoma mansoni]
gi|360043417|emb|CCD78830.1| hypothetical protein Smp_042670.2 [Schistosoma mansoni]
Length = 1116
Score = 76.3 bits (186), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 47/63 (74%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L+ GCR+PA S LTPVDRIF+R+GA D + +ST+L EL+E+ +I+ H + +SL L+
Sbjct: 893 LAHLGCRIPAKSCKLTPVDRIFSRLGASDRMLSGESTFLVELSETASILHHITPHSLVLM 952
Query: 154 DEL 156
DEL
Sbjct: 953 DEL 955
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L+NL ++ N+ D + EG+L+++L+ C T FG+R+LR + P N + I+QRQ
Sbjct: 469 VLDNITLSNLDIIRNNVDGSQEGSLLQRLNTCCTFFGRRLLRQWITAPPCNPNVIRQRQL 528
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADS 105
AI L+ I ++R K+ L DLER++ L +G + DS
Sbjct: 529 AIENLISISDIIPKLREKLAQLPDLERLITKIHLLGSKGDKNHPDS 574
>gi|319411719|emb|CBQ73763.1| related to MSH6-DNA mismatch repair protein (N-terminal fragment)
[Sporisorium reilianum SRZ2]
Length = 1279
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 54/89 (60%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ +L +L+VL N + T EGTL L+ CVT GKR+ + LV PL DAI+ RQDA
Sbjct: 684 VLDAQSLTHLNVLQNDEGTDEGTLHRLLNRCVTPSGKRLFKIWLVAPLATADAIRARQDA 743
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLP 89
+ LL ++ K L D+ER++P
Sbjct: 744 VEDLLKNPCFGDEFETFGKALPDIERIVP 772
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/59 (44%), Positives = 38/59 (64%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GCRVPA L+PVDR+ +RMGA D + ST++ E+ E+ I+ + SL ++DEL
Sbjct: 1061 GCRVPASRARLSPVDRVASRMGANDQIFRNNSTFMVEMLETSRIINECTPRSLVIMDEL 1119
>gi|256078667|ref|XP_002575616.1| hypothetical protein [Schistosoma mansoni]
gi|360043418|emb|CCD78831.1| hypothetical protein Smp_042670.1 [Schistosoma mansoni]
Length = 1074
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 47/63 (74%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L+ GCR+PA S LTPVDRIF+R+GA D + +ST+L EL+E+ +I+ H + +SL L+
Sbjct: 893 LAHLGCRIPAKSCKLTPVDRIFSRLGASDRMLSGESTFLVELSETASILHHITPHSLVLM 952
Query: 154 DEL 156
DEL
Sbjct: 953 DEL 955
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 64/106 (60%), Gaps = 1/106 (0%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L+NL ++ N+ D + EG+L+++L+ C T FG+R+LR + P N + I+QRQ
Sbjct: 469 VLDNITLSNLDIIRNNVDGSQEGSLLQRLNTCCTFFGRRLLRQWITAPPCNPNVIRQRQL 528
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADS 105
AI L+ I ++R K+ L DLER++ L +G + DS
Sbjct: 529 AIENLISISDIIPKLREKLAQLPDLERLITKIHLLGSKGDKNHPDS 574
>gi|395829622|ref|XP_003787948.1| PREDICTED: DNA mismatch repair protein Msh6-like isoform 2
[Otolemur garnettii]
Length = 1056
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I++HA+ +SL LVDEL
Sbjct: 853 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILKHATAHSLVLVDEL 911
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL + AI R D
Sbjct: 430 VLDAVTLNNLEIFQNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCSPYAISDRLD 489
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 490 AIEDLMAFPDKISEVVDLLKKLPDLERLL 518
>gi|116203755|ref|XP_001227688.1| hypothetical protein CHGG_09761 [Chaetomium globosum CBS 148.51]
gi|88175889|gb|EAQ83357.1| hypothetical protein CHGG_09761 [Chaetomium globosum CBS 148.51]
Length = 1221
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTN-SDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD +L NL + TN ++N EGTL L+ C+T FGKR+ R + PL N I +R D
Sbjct: 633 ILDGQSLINLEIFTNTANNGPEGTLFNLLNRCITPFGKRLFRQWVCHPLCNTQKINERLD 692
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L + I +Q ++M + DLER++
Sbjct: 693 AVDMLNADRSILQQFSSQMAKMPDLERLI 721
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S TLTP+DRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 1008 GCYVPALSATLTPIDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1066
>gi|410901537|ref|XP_003964252.1| PREDICTED: DNA mismatch repair protein Msh6-like [Takifugu rubripes]
Length = 1373
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ L TPVDR+FTR+GA D + +ST+ EL+E+ +I+ HA+K+SL L+DEL
Sbjct: 1170 GCFVPAERLRFTPVDRVFTRLGASDRIMSGESTFFVELSETASILHHATKHSLVLLDEL 1228
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 53/88 (60%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D LANL + N +EGTL+E+LD C T FGKR+L+ L PL N +IK R DA
Sbjct: 746 VVDGVTLANLEIFQNGSGGSEGTLLERLDTCCTLFGKRLLKQWLCAPLCNPLSIKDRLDA 805
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ L+ + ++ +K L DLER+L
Sbjct: 806 VEDLMGLQAQAGEVSDLLKKLPDLERLL 833
>gi|444920524|ref|ZP_21240365.1| DNA mismatch repair protein MutS [Wohlfahrtiimonas chitiniclastica
SH04]
gi|444508343|gb|ELV08514.1| DNA mismatch repair protein MutS [Wohlfahrtiimonas chitiniclastica
SH04]
Length = 863
Score = 75.9 bits (185), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 50/65 (76%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA + TL PVDRIFTR+GA+D+LS QST++ E+ E+ TI+ +A++ SL
Sbjct: 631 TLLAYIGSFVPAKAATLGPVDRIFTRIGAQDDLSSGQSTFMVEMLETATILHYATEKSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEV 695
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 42/159 (26%), Positives = 76/159 (47%), Gaps = 14/159 (8%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+T NL + TE TL +DHC T G R+L L +PL + + + +R D
Sbjct: 266 ILDTTTRKNLEIERTLSGGTEHTLRALIDHCQTPMGSRLLSRWLNRPLRDHNILNERLDL 325
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSL----TLTPVDRIFT 116
I + + + E + +K + D+ER+ +T ++ + R P D + +LT + +
Sbjct: 326 IEAI---EPLCEVLSPLLKQMADIERL---ATRIALKTAR-PRDLIQLKQSLTALPTLCD 378
Query: 117 RMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDE 155
+ D ++ + A+L ++ S+ A+VDE
Sbjct: 379 HIANNDTIATIAPLWQADLVPMPELLDLISR---AIVDE 414
>gi|49615726|gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida]
Length = 1303
Score = 75.9 bits (185), Expect = 6e-12, Method: Composition-based stats.
Identities = 41/91 (45%), Positives = 62/91 (68%), Gaps = 4/91 (4%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ AL NL + NS N + GTL Q++HC+T FGKRMLR+ L +PL + ++I++RQD
Sbjct: 667 VLDAAALENLEIFENSRNGDSSGTLYAQVNHCMTPFGKRMLRSWLARPLYHPESIRERQD 726
Query: 60 AISVL--LDQKHITEQMRAKMKDLRDLERML 88
A+S L L+ + E R ++ L D+ER+L
Sbjct: 727 AVSGLKGLNLPFVLE-FRKELSRLPDMERLL 756
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 48/73 (65%)
Query: 84 LERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMR 143
L R + + L+ G VPA S L+PVDRIF RMGAKD++ QST+L E+ E+ +++
Sbjct: 1063 LLRQVCLAVILAQVGADVPASSFDLSPVDRIFVRMGAKDHIMAGQSTFLTEILETASMLS 1122
Query: 144 HASKYSLALVDEL 156
AS+ SL +DEL
Sbjct: 1123 LASRNSLVALDEL 1135
>gi|395829624|ref|XP_003787949.1| PREDICTED: DNA mismatch repair protein Msh6-like isoform 3 [Otolemur
garnettii]
Length = 1228
Score = 75.9 bits (185), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I++HA+ +SL LVDEL
Sbjct: 1025 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILKHATAHSLVLVDEL 1083
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL + AI R D
Sbjct: 602 VLDAVTLNNLEIFQNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCSPYAISDRLD 661
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 662 AIEDLMAFPDKISEVVDLLKKLPDLERLL 690
>gi|300312567|ref|YP_003776659.1| DNA mismatch repair protein [Herbaspirillum seropedicae SmR1]
gi|300075352|gb|ADJ64751.1| DNA mismatch repair protein [Herbaspirillum seropedicae SmR1]
Length = 894
Score = 75.5 bits (184), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 50/65 (76%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA S + PVDRIFTR+GA D+L+G +ST++ E+TES I+ +A+++SL
Sbjct: 649 TLLAYVGSFVPATSAVIGPVDRIFTRIGAADDLAGGRSTFMVEMTESAAILNNATEHSLV 708
Query: 152 LVDEL 156
L+DE+
Sbjct: 709 LMDEV 713
Score = 36.2 bits (82), Expect = 4.5, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 18 NTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAK 77
N TL LDHC T+ G R+LR L L + + R AI+ L+ + + A
Sbjct: 298 NALAPTLFSTLDHCRTAMGSRLLRHWLHHALRDQQVARARHAAINALM-RTDACSGLSAT 356
Query: 78 MKDLRDLERMLPSSTFLS 95
+ + D+ER+ LS
Sbjct: 357 LAAVPDIERITTRIALLS 374
>gi|255548475|ref|XP_002515294.1| ATP binding protein, putative [Ricinus communis]
gi|223545774|gb|EEF47278.1| ATP binding protein, putative [Ricinus communis]
Length = 1306
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTNSDNTT-EGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD+ AL NL + NS N GTL QL+HCVT+FGKR+L+ L +PL +L +I RQD
Sbjct: 668 ILDAAALENLEIFENSRNGGLSGTLYAQLNHCVTAFGKRLLKTWLARPLYHLRSIVDRQD 727
Query: 60 AISVLLD-QKHITEQMRAKMKDLRDLERML 88
A++ L + T + R + L D+ER++
Sbjct: 728 AVAGLRGVNQPATLEFRKALSRLPDMERLI 757
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA+S L+PVDRIF RMGAKD++ QST+L EL+E+ ++ A++ SL +DEL
Sbjct: 1077 GADVPAESFELSPVDRIFVRMGAKDHIMAGQSTFLTELSETALMLSSATRNSLVTLDEL 1135
>gi|259909439|ref|YP_002649795.1| DNA mismatch repair protein MutS [Erwinia pyrifoliae Ep1/96]
gi|224965061|emb|CAX56593.1| DNA mismatch repair protein [Erwinia pyrifoliae Ep1/96]
Length = 858
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 50/65 (76%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL
Sbjct: 638 TLMAYIGSFVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLV 697
Query: 152 LVDEL 156
L+DE+
Sbjct: 698 LMDEI 702
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L PL N I QRQ +
Sbjct: 275 IMDAATRRNLEITQNLAGGSENTLASVLDKTVTPMGSRMLKRWLHMPLRNTQTITQRQQS 334
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D +++ + ++ + DLER+L
Sbjct: 335 IRALQD---LSDNLPPLLRQVGDLERIL 359
>gi|358331876|dbj|GAA30349.2| DNA mismatch repair protein MSH6 [Clonorchis sinensis]
Length = 835
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LDS LANL +L NS T EGTL+E+LD C T FG+R+LR L P N I+ RQD
Sbjct: 673 VLDSITLANLDILHNSVTGTREGTLLERLDTCCTPFGRRLLRQWLTAPPCNPKLIRARQD 732
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L+D ++ ++ L D ER+L
Sbjct: 733 AVDNLIDIGGQLNSIKLSLRRLPDFERLL 761
>gi|409407051|ref|ZP_11255502.1| DNA mismatch repair protein [Herbaspirillum sp. GW103]
gi|386432802|gb|EIJ45628.1| DNA mismatch repair protein [Herbaspirillum sp. GW103]
Length = 893
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 51/65 (78%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA S + P+DRIFTR+GA D+L+G +ST++ E+TES +I+ +A+++SL
Sbjct: 649 TLLAYVGSFVPATSAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTESASILNNATEHSLV 708
Query: 152 LVDEL 156
L+DE+
Sbjct: 709 LMDEV 713
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 36/78 (46%), Gaps = 1/78 (1%)
Query: 18 NTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAK 77
N TL LDHC T+ G R+LR L L + + R AI+ L+ + + A
Sbjct: 298 NALAPTLFSTLDHCRTAMGSRLLRHWLHHALRDQQVARARHAAINALM-RTDACSGLSAT 356
Query: 78 MKDLRDLERMLPSSTFLS 95
+ + D+ER+ LS
Sbjct: 357 LAAVPDIERITTRIALLS 374
>gi|358390700|gb|EHK40105.1| hypothetical protein TRIATDRAFT_252385 [Trichoderma atroviride IMI
206040]
Length = 1184
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + +N+ N T+GTL L+ C+T FGKR+ R + PL N+D I +R D
Sbjct: 595 VLDGQTLTNLELFSNTVNGNTDGTLFGLLNKCITPFGKRLFRQWVAHPLCNIDRINERLD 654
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L D + EQ +++ + DLER++
Sbjct: 655 AVELLNDDPSVREQFASQLVKMPDLERLI 683
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 971 GCFVPAKSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1029
>gi|387872418|ref|YP_005803800.1| DNA mismatch repair protein mutS [Erwinia pyrifoliae DSM 12163]
gi|283479513|emb|CAY75429.1| DNA mismatch repair protein mutS [Erwinia pyrifoliae DSM 12163]
Length = 876
Score = 75.5 bits (184), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 50/65 (76%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL
Sbjct: 656 TLMAYIGSFVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLV 715
Query: 152 LVDEL 156
L+DE+
Sbjct: 716 LMDEI 720
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L PL N I QRQ +
Sbjct: 293 IMDAATRRNLEITQNLAGGSENTLASVLDKTVTPMGSRMLKRWLHMPLRNTQTITQRQQS 352
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D +++ + ++ + DLER+L
Sbjct: 353 IRALQD---LSDNLPPLLRQVGDLERIL 377
>gi|326914905|ref|XP_003203763.1| PREDICTED: DNA mismatch repair protein Msh6-like [Meleagris
gallopavo]
Length = 1289
Score = 75.1 bits (183), Expect = 8e-12, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 46/59 (77%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I++HA+++SL LVDEL
Sbjct: 1086 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETSSILQHATEHSLVLVDEL 1144
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL VL N N TTEGTL+E++D C T FGKR+L+ L PL N +I R D
Sbjct: 663 VLDGVTLMNLEVLQNGTNGTTEGTLLERIDSCCTPFGKRLLKQWLCAPLCNPTSINDRLD 722
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ LL ++ +K L DLER+L
Sbjct: 723 AVEDLLAVPAKLTEISEHLKKLPDLERLL 751
>gi|440794306|gb|ELR15471.1| MutS domain V domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 1150
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S L+PVDRIFTR+GA DN+ QST++ EL E+ +I++HA+ SL ++DEL
Sbjct: 901 GCFVPAASCRLSPVDRIFTRIGANDNIMAGQSTFMIELQETASILQHATPASLVILDEL 959
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 60/108 (55%), Gaps = 13/108 (12%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LDS + NL + N+ D TEGTL++ +DHC T FGKR+ + L PL + I++RQ+
Sbjct: 508 VLDSKTIKNLEIFENTVDGKTEGTLLKLMDHCSTPFGKRLFKRWLAMPLKRIHEIEERQN 567
Query: 60 AISVL-LDQKHIT---EQMRAKMKDLRDLERML--------PSSTFLS 95
A+ + H T + + +K L DLER++ P TFLS
Sbjct: 568 AVEDFNGSEDHSTTLKDAVALNLKGLPDLERIVSRIHAGSSPILTFLS 615
>gi|292487253|ref|YP_003530125.1| DNA mismatch repair protein mutS [Erwinia amylovora CFBP1430]
gi|292900376|ref|YP_003539745.1| DNA mismatch repair protein [Erwinia amylovora ATCC 49946]
gi|428784185|ref|ZP_19001677.1| DNA mismatch repair protein mutS [Erwinia amylovora ACW56400]
gi|291200224|emb|CBJ47352.1| DNA mismatch repair protein [Erwinia amylovora ATCC 49946]
gi|291552672|emb|CBA19717.1| DNA mismatch repair protein mutS [Erwinia amylovora CFBP1430]
gi|426277324|gb|EKV55050.1| DNA mismatch repair protein mutS [Erwinia amylovora ACW56400]
Length = 853
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPAD + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +AS+YSL
Sbjct: 633 TLMAYIGSFVPADQAVIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNASEYSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LMDEI 697
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT+ G RML+ L PL N I RQ +
Sbjct: 270 IMDAATRRNLEITQNLAGGSENTLASVLDKTVTAMGSRMLKRWLNMPLRNTQTITLRQQS 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D +++ + ++ + DLER+L
Sbjct: 330 IRALQD---LSDNLSPLLRQVGDLERIL 354
>gi|167854913|ref|ZP_02477689.1| DNA mismatch repair protein MutS [Haemophilus parasuis 29755]
gi|167853980|gb|EDS25218.1| DNA mismatch repair protein MutS [Haemophilus parasuis 29755]
Length = 865
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVK----PLTNLDAIKQR 57
L S LA L VLTN E L++ + SF + R +K P+ +K
Sbjct: 545 LASFVLAELDVLTNLAERAES-----LNYVMPSFSHQ--RGVNIKGGRHPVVE-QVLKTP 596
Query: 58 QDAISVLLD-QKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFT 116
A VLL+ Q+H+ M R + T +++ G VPADS + P+DRIFT
Sbjct: 597 FIANPVLLNPQRHLLIVTGPNMGGKSTYMRQIALITLMAYIGSFVPADSAEIGPIDRIFT 656
Query: 117 RMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
R+GA D+L+ +ST++ E+TE I+ +S+ SL LVDE+
Sbjct: 657 RIGASDDLASGRSTFMVEMTEMANILHQSSENSLVLVDEI 696
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LDS NL + TN TE TL LD CVTS G R+L+ + +P+ +L + RQ
Sbjct: 268 LLDSATRRNLELTTNLAGGTENTLTSVLDKCVTSMGSRLLKRWIHQPIRDLAKLHTRQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L + I E ++ ++ + D+ER+L
Sbjct: 328 ILALQKNERI-EPLQPLLQQVGDMERIL 354
>gi|336467632|gb|EGO55796.1| DNA mismatch repair protein msh6 [Neurospora tetrasperma FGSC 2508]
Length = 1235
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD +L NL + N+ N EGTL L+ C+T FGKR+ R + PL N+ + +R D
Sbjct: 642 ILDGQSLINLEIFANTANGGPEGTLFHLLNRCITPFGKRLFRQWVCHPLCNIQKLNERLD 701
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L D + EQ ++M + DLER++
Sbjct: 702 AVDMLNDDHSLREQFSSQMSKMPDLERLI 730
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 1018 GCYVPAVSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1076
>gi|350287714|gb|EGZ68950.1| DNA mismatch repair protein msh6 [Neurospora tetrasperma FGSC 2509]
Length = 1243
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD +L NL + N+ N EGTL L+ C+T FGKR+ R + PL N+ + +R D
Sbjct: 650 ILDGQSLINLEIFANTANGGPEGTLFHLLNRCITPFGKRLFRQWVCHPLCNIQKLNERLD 709
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L D + EQ ++M + DLER++
Sbjct: 710 AVDMLNDDHSLREQFSSQMSKMPDLERLI 738
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 1026 GCYVPAVSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1084
>gi|321469768|gb|EFX80747.1| putative MSH6, mismatch repair ATPase [Daphnia pulex]
Length = 1310
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 41/89 (46%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSD-NTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL VL NS TT G+L+E+L+ C T+FG+RMLR L PL DAI R D
Sbjct: 690 VLDGMTLRNLDVLVNSSTGTTTGSLLERLNRCNTAFGQRMLRHWLCAPLCQQDAIDDRLD 749
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ LL E++ +K L DLER++
Sbjct: 750 AVEYLLSNTAAIEEVGKILKSLPDLERLV 778
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA+ LTPVDR+FTR+GA D++ G +ST+ EL+E+ I++HA+ +SL L+DEL
Sbjct: 1110 GSFVPAEEFELTPVDRLFTRLGANDHILGGESTFFVELSETAAILKHATLHSLVLLDEL 1168
>gi|302890002|ref|XP_003043886.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256724804|gb|EEU38173.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1201
Score = 75.1 bits (183), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL V +NS N TEGTL L+ C+T FGKR+ R+ + PL N+D I +R D
Sbjct: 612 VLDGQTLINLEVFSNSVNGGTEGTLFSLLNKCITPFGKRLFRSWVAHPLCNIDRINERLD 671
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L + + E +++ + DLER++
Sbjct: 672 AVEMLNADQGVREDFASQLVKMPDLERLI 700
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 988 GCFVPATSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1046
>gi|312171355|emb|CBX79614.1| DNA mismatch repair protein mutS [Erwinia amylovora ATCC BAA-2158]
Length = 853
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPAD + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +AS+YSL
Sbjct: 633 TLMAYIGSFVPADQAVIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNASEYSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LMDEI 697
Score = 50.4 bits (119), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT+ G RML+ L PL N I RQ +
Sbjct: 270 IMDAATRRNLEITQNLAGGSENTLASVLDKTVTAMGSRMLKRWLNMPLRNTQTITLRQQS 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D +++ + ++ + DLER+L
Sbjct: 330 IRALQD---LSDNLSPLLRQVGDLERIL 354
>gi|363731315|ref|XP_419359.3| PREDICTED: DNA mismatch repair protein Msh6 [Gallus gallus]
Length = 1345
Score = 75.1 bits (183), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 46/59 (77%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I++HA+++SL LVDEL
Sbjct: 1142 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETSSILQHATEHSLVLVDEL 1200
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 41/89 (46%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL VL N N TTEGTL+E++D C T FGKR+L+ L PL N +I R D
Sbjct: 719 VLDGVTLMNLEVLQNGTNGTTEGTLLERIDSCCTPFGKRLLKQWLCAPLCNPTSINDRLD 778
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ LL ++ +K L DLER+L
Sbjct: 779 AVEDLLAVPAKLTEITEHLKKLPDLERLL 807
>gi|219871607|ref|YP_002475982.1| DNA mismatch repair protein MutS [Haemophilus parasuis SH0165]
gi|219691811|gb|ACL33034.1| DNA mismatch repair protein [Haemophilus parasuis SH0165]
Length = 853
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 56/160 (35%), Positives = 83/160 (51%), Gaps = 13/160 (8%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVK----PLTNLDAIKQR 57
L S LA L VLTN E L++ + SF + R +K P+ +K
Sbjct: 533 LASFVLAELDVLTNLAERAES-----LNYVMPSFSHQ--RGVNIKGGRHPVVE-QVLKTP 584
Query: 58 QDAISVLLD-QKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFT 116
A VLL+ Q+H+ M R + T +++ G VPADS + P+DRIFT
Sbjct: 585 FIANPVLLNPQRHLLIVTGPNMGGKSTYMRQIALITLMAYIGSFVPADSAEIGPIDRIFT 644
Query: 117 RMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
R+GA D+L+ +ST++ E+TE I+ +S+ SL LVDE+
Sbjct: 645 RIGASDDLASGRSTFMVEMTEMANILHQSSENSLVLVDEI 684
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LDS NL + TN TE TL LD CVTS G R+L+ + +P+ +L + RQ
Sbjct: 256 LLDSATRRNLELTTNLAGGTENTLTSVLDKCVTSMGSRLLKRWIHQPIRDLAKLHTRQQT 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L + I E ++ ++ + D+ER+L
Sbjct: 316 ILALQKNERI-EPLQPLLQQVGDMERIL 342
>gi|54288196|gb|AAV31543.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 227
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ PVDRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPVDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|164423588|ref|XP_959678.2| DNA mismatch repair protein msh6 [Neurospora crassa OR74A]
gi|157070157|gb|EAA30442.2| DNA mismatch repair protein msh6 [Neurospora crassa OR74A]
Length = 1237
Score = 75.1 bits (183), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD +L NL + N+ N EGTL L+ C+T FGKR+ R + PL N+ + +R D
Sbjct: 644 ILDGQSLINLEIFANTANGGPEGTLFHLLNRCITPFGKRLFRQWVCHPLCNIQKLNERLD 703
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L D + EQ ++M + DLER++
Sbjct: 704 AVDMLNDDHSLREQFSSQMSKMPDLERLI 732
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 1020 GCYVPAVSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1078
>gi|224824756|ref|ZP_03697863.1| DNA mismatch repair protein MutS [Pseudogulbenkiania ferrooxidans
2002]
gi|224603249|gb|EEG09425.1| DNA mismatch repair protein MutS [Pseudogulbenkiania ferrooxidans
2002]
Length = 848
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L+ G VPADS L P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ +AS SL
Sbjct: 625 TLLAHVGSFVPADSAVLGPIDRIFTRIGASDDLAGGRSTFMVEMTETANILNNASDKSLV 684
Query: 152 LVDEL 156
L+DE+
Sbjct: 685 LMDEV 689
>gi|312072605|ref|XP_003139141.1| hypothetical protein LOAG_03556 [Loa loa]
gi|307765695|gb|EFO24929.1| hypothetical protein LOAG_03556 [Loa loa]
Length = 1204
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPAD + L+PVDRIFTRMGA D ++ QST+ EL E+ I+R+A+K+SL ++DEL
Sbjct: 999 GSFVPADEMKLSPVDRIFTRMGAGDRITAGQSTFYVELYETNLILRNATKHSLVIMDEL 1057
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/100 (30%), Positives = 52/100 (52%), Gaps = 12/100 (12%)
Query: 1 ILDSTALANLHVLTNSDN----------TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTN 50
ILDS L +L+++ + TT+ TL ++ C T GKR+LR + P+ +
Sbjct: 575 ILDSLTLKHLNIIPPIGSMKKFAPRDPITTKYTLYNVINKCATPAGKRLLRQWVCAPVCD 634
Query: 51 LDAIKQRQDAISVLLDQ--KHITEQMRAKMKDLRDLERML 88
+ + RQDAI L + K ++ R ++ + DLER++
Sbjct: 635 QEILSSRQDAIEWLSEARLKGFIDKARERLCKVPDLERLV 674
>gi|358331875|dbj|GAA50639.1| DNA mismatch repair protein MSH6 [Clonorchis sinensis]
Length = 503
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 45/63 (71%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L+ GCR+PA LTPVDR+F+R+GA D L +ST++ EL E+ I+RH + +SL L+
Sbjct: 285 LAHLGCRIPASFCRLTPVDRVFSRLGASDRLLAGESTFMVELAETAAILRHCTPHSLVLM 344
Query: 154 DEL 156
DEL
Sbjct: 345 DEL 347
>gi|395829620|ref|XP_003787947.1| PREDICTED: DNA mismatch repair protein Msh6-like isoform 1 [Otolemur
garnettii]
Length = 1358
Score = 74.7 bits (182), Expect = 1e-11, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I++HA+ +SL LVDEL
Sbjct: 1155 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILKHATAHSLVLVDEL 1213
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL + AI R D
Sbjct: 732 VLDAVTLNNLEIFQNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCSPYAISDRLD 791
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 792 AIEDLMAFPDKISEVVDLLKKLPDLERLL 820
>gi|347538506|ref|YP_004845930.1| DNA mismatch repair protein MutS [Pseudogulbenkiania sp. NH8B]
gi|345641683|dbj|BAK75516.1| DNA mismatch repair protein MutS [Pseudogulbenkiania sp. NH8B]
Length = 848
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L+ G VPADS L P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ +AS SL
Sbjct: 625 TLLAHVGSFVPADSAVLGPIDRIFTRIGASDDLAGGRSTFMVEMTETANILNNASDKSLV 684
Query: 152 LVDEL 156
L+DE+
Sbjct: 685 LMDEV 689
>gi|78485935|ref|YP_391860.1| DNA mismatch repair protein MutS [Thiomicrospira crunogena XCL-2]
gi|123555225|sp|Q31F87.1|MUTS_THICR RecName: Full=DNA mismatch repair protein MutS
gi|78364221|gb|ABB42186.1| DNA mismatch repair protein MutS [Thiomicrospira crunogena XCL-2]
Length = 871
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/64 (50%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA+S TL P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ HAS SL L
Sbjct: 635 IMAYMGSFVPAESATLGPIDRIFTRIGASDDLTSGRSTFMVEMTETANILHHASPESLIL 694
Query: 153 VDEL 156
+DE+
Sbjct: 695 MDEV 698
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ + NL + TN TL LD+ T+ G R++ L +PL N D I R +AI
Sbjct: 270 LDAMSRRNLELDTNLTGGKNHTLFAILDNATTAMGSRLMNRWLNQPLRNRDIINDRFNAI 329
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+++Q H E+ R+ +K + DLER+L
Sbjct: 330 EDIIEQ-HSQEEFRSALKPIGDLERIL 355
>gi|406942633|gb|EKD74823.1| hypothetical protein ACD_44C00324G0002 [uncultured bacterium]
Length = 236
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L+ GC VPA+S + P+DRIFTR+GA DNL+ ST++ E+TE+ I+ +A+++SL L+
Sbjct: 25 LAHIGCFVPAESACIGPIDRIFTRIGASDNLAQGHSTFMVEMTETANILHNATQHSLVLL 84
Query: 154 DEL 156
DE+
Sbjct: 85 DEI 87
>gi|34481396|emb|CAC79990.1| sperm protein [Homo sapiens]
Length = 328
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 125 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILMHATAHSLVLVDEL 183
>gi|359499662|gb|AEV53227.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499692|gb|AEV53242.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
syzygii R24]
Length = 217
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 49/66 (74%)
Query: 91 STFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSL 150
+ L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 13 AVLLAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSL 72
Query: 151 ALVDEL 156
L+DE+
Sbjct: 73 VLMDEI 78
>gi|346322336|gb|EGX91935.1| DNA mismatch repair protein msh6 [Cordyceps militaris CM01]
Length = 1207
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + +NS N ++GTL + L+ C+T FGKR+ R + PL N+D I +R D
Sbjct: 618 VLDGQTLINLEIFSNSVNGGSDGTLFQLLNKCITPFGKRLFRQWVAHPLQNIDRINERLD 677
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L + + EQ +++ + DLER++
Sbjct: 678 AVDMLNNDPSVREQFASQLVKMPDLERLI 706
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 994 GCYVPAVSAKLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILAEATPRSLVILDEL 1052
>gi|359499690|gb|AEV53241.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
syzygii]
Length = 217
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 49/66 (74%)
Query: 91 STFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSL 150
+ L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 13 AVLLAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSL 72
Query: 151 ALVDEL 156
L+DE+
Sbjct: 73 VLMDEI 78
>gi|344174291|emb|CCA86081.1| methyl-directed DNA mismatch repair protein [Ralstonia syzygii R24]
Length = 896
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 49/66 (74%)
Query: 91 STFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSL 150
+ L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 659 AVLLAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSL 718
Query: 151 ALVDEL 156
L+DE+
Sbjct: 719 VLMDEI 724
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + TL LD C TS G R+LR L PL + + RQ AI
Sbjct: 297 LDTATRRNLELTETLRGQESPTLFSLLDTCATSMGSRLLRHWLHHPLRDRAVPQARQQAI 356
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
VLL + +R ++ L D+ER+
Sbjct: 357 EVLLAGD--WQSLRGTLRTLSDVERI 380
>gi|331267588|gb|AED02254.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 187
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 8 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 67
Query: 154 DEL 156
DE+
Sbjct: 68 DEI 70
>gi|329904402|ref|ZP_08273796.1| DNA mismatch repair protein MutS [Oxalobacteraceae bacterium
IMCC9480]
gi|327548006|gb|EGF32745.1| DNA mismatch repair protein MutS [Oxalobacteraceae bacterium
IMCC9480]
Length = 889
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA S T+ P+DRIFTR+GA D+L+G +ST++ E+TES I+ A+ SL
Sbjct: 660 TLLAYVGSYVPAASATIGPIDRIFTRIGAADDLAGGRSTFMVEMTESAAILNGATAQSLV 719
Query: 152 LVDEL 156
L+DE+
Sbjct: 720 LMDEV 724
>gi|140090266|gb|ABO85188.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
Length = 227
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|331267568|gb|AED02244.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 229
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 10 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 69
Query: 154 DEL 156
DE+
Sbjct: 70 DEI 72
>gi|140090292|gb|ABO85201.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
Length = 227
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|54288288|gb|AAV31589.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|156105481|gb|ABU49197.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 227
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|54297717|ref|YP_124086.1| DNA mismatch repair protein MutS [Legionella pneumophila str.
Paris]
gi|81679454|sp|Q5X4B2.1|MUTS_LEGPA RecName: Full=DNA mismatch repair protein MutS
gi|53751502|emb|CAH12920.1| DNA mismatch repair protein MutS [Legionella pneumophila str.
Paris]
Length = 846
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/65 (52%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
LS G VPAD +TL P+DRIFTR+GA D+LS +ST++ E+TE+ I+R A+ SL
Sbjct: 627 VLLSHIGSFVPADEVTLGPLDRIFTRIGASDDLSSGRSTFMVEMTETAQILRQATSQSLV 686
Query: 152 LVDEL 156
L+DE+
Sbjct: 687 LIDEI 691
Score = 37.0 bits (84), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD++ +L + N E L+ LD + G R+L+ L KPL I+ RQ AI
Sbjct: 263 LDASTQKHLELFENIHGGGEHCLLSILDKTACAMGSRLLKRWLGKPLKQHAIIQTRQQAI 322
Query: 62 S--VLLDQKHITEQMRAKMKDLRDLERML 88
+ L Q Q+ +K D+ER++
Sbjct: 323 KEIIFLQQDVSLHQL---IKQCADVERIV 348
>gi|331267580|gb|AED02250.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 236
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 10 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 69
Query: 154 DEL 156
DE+
Sbjct: 70 DEI 72
>gi|331267624|gb|AED02272.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 243
Score = 74.7 bits (182), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 17 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 76
Query: 154 DEL 156
DE+
Sbjct: 77 DEI 79
>gi|406719530|dbj|BAM45074.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
Length = 219
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 6 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 65
Query: 154 DEL 156
DE+
Sbjct: 66 DEI 68
>gi|331267600|gb|AED02260.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 233
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 8 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 67
Query: 154 DEL 156
DE+
Sbjct: 68 DEI 70
>gi|331267628|gb|AED02274.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 234
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 8 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 67
Query: 154 DEL 156
DE+
Sbjct: 68 DEI 70
>gi|331267618|gb|AED02269.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 236
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 15 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 74
Query: 154 DEL 156
DE+
Sbjct: 75 DEI 77
>gi|331267574|gb|AED02247.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|331267602|gb|AED02261.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 190
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 7 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 66
Query: 154 DEL 156
DE+
Sbjct: 67 DEI 69
>gi|334143596|ref|YP_004536752.1| DNA mismatch repair protein mutS [Thioalkalimicrobium cyclicum
ALM1]
gi|333964507|gb|AEG31273.1| DNA mismatch repair protein mutS [Thioalkalimicrobium cyclicum
ALM1]
Length = 862
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L+ GC VPA P+DRIFTR+GA D+L+ +ST++ E+TE+ I+RHAS SL
Sbjct: 631 TILAHIGCFVPAKQACFGPIDRIFTRIGASDDLTSGRSTFMVEMTETAHILRHASNQSLI 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEV 695
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + ++ TL +D C T+ G R+LR L +PL N I+QR + +
Sbjct: 269 LDAITRRNLEIDSHQQGFQHHTLFHLIDQCQTAMGSRLLRRWLRQPLRNRTHIRQRLNVV 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
LL + ++ +K + DLER+L
Sbjct: 329 DSLLHSQEYP-ILQEHLKPIGDLERIL 354
>gi|140090332|gb|ABO85221.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
Length = 231
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|406719516|dbj|BAM45067.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719518|dbj|BAM45068.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
Length = 218
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 6 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 65
Query: 154 DEL 156
DE+
Sbjct: 66 DEI 68
>gi|331267596|gb|AED02258.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 185
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 6 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 65
Query: 154 DEL 156
DE+
Sbjct: 66 DEI 68
>gi|331267572|gb|AED02246.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 237
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 10 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 69
Query: 154 DEL 156
DE+
Sbjct: 70 DEI 72
>gi|54288280|gb|AAV31585.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 228
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|331267616|gb|AED02268.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 232
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 7 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 66
Query: 154 DEL 156
DE+
Sbjct: 67 DEI 69
>gi|54288258|gb|AAV31574.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288266|gb|AAV31578.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 227
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|54288138|gb|AAV31514.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288142|gb|AAV31516.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288148|gb|AAV31519.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288152|gb|AAV31521.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288162|gb|AAV31526.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288166|gb|AAV31528.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288176|gb|AAV31533.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288182|gb|AAV31536.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288186|gb|AAV31538.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288198|gb|AAV31544.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288202|gb|AAV31546.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288220|gb|AAV31555.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288222|gb|AAV31556.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288224|gb|AAV31557.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288228|gb|AAV31559.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288230|gb|AAV31560.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288232|gb|AAV31561.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288234|gb|AAV31562.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288250|gb|AAV31570.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288252|gb|AAV31571.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288254|gb|AAV31572.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288256|gb|AAV31573.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288274|gb|AAV31582.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288282|gb|AAV31586.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288290|gb|AAV31590.1| DNA mismatch repair protein [Ralstonia solanacearum MolK2]
gi|54288300|gb|AAV31595.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|140090342|gb|ABO85226.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090344|gb|ABO85227.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090346|gb|ABO85228.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090348|gb|ABO85229.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090350|gb|ABO85230.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140417436|gb|ABO86761.1| MutS [Ralstonia solanacearum]
gi|140417440|gb|ABO86763.1| MutS [Ralstonia solanacearum MolK2]
gi|140417442|gb|ABO86764.1| MutS [Ralstonia solanacearum IPO1609]
gi|140417444|gb|ABO86765.1| MutS [Ralstonia solanacearum]
gi|140417446|gb|ABO86766.1| MutS [Ralstonia solanacearum]
gi|140417448|gb|ABO86767.1| MutS [Ralstonia solanacearum]
gi|140417450|gb|ABO86768.1| MutS [Ralstonia solanacearum]
gi|140417452|gb|ABO86769.1| MutS [Ralstonia solanacearum]
gi|140417454|gb|ABO86770.1| MutS [Ralstonia solanacearum]
gi|140417456|gb|ABO86771.1| MutS [Ralstonia solanacearum]
gi|140417458|gb|ABO86772.1| MutS [Ralstonia solanacearum]
gi|140417460|gb|ABO86773.1| MutS [Ralstonia solanacearum]
gi|140417462|gb|ABO86774.1| MutS [Ralstonia solanacearum]
gi|140417464|gb|ABO86775.1| MutS [Ralstonia solanacearum]
gi|140417466|gb|ABO86776.1| MutS [Ralstonia solanacearum]
gi|140417468|gb|ABO86777.1| MutS [Ralstonia solanacearum]
gi|140417470|gb|ABO86778.1| MutS [Ralstonia solanacearum]
gi|140417472|gb|ABO86779.1| MutS [Ralstonia solanacearum]
gi|140417474|gb|ABO86780.1| MutS [Ralstonia solanacearum]
gi|140417476|gb|ABO86781.1| MutS [Ralstonia solanacearum]
gi|140417478|gb|ABO86782.1| MutS [Ralstonia solanacearum]
gi|140417480|gb|ABO86783.1| MutS [Ralstonia solanacearum]
gi|140417482|gb|ABO86784.1| MutS [Ralstonia solanacearum]
gi|140417492|gb|ABO86789.1| MutS [Ralstonia solanacearum]
gi|140417494|gb|ABO86790.1| MutS [Ralstonia solanacearum]
gi|140417496|gb|ABO86791.1| MutS [Ralstonia solanacearum]
gi|170878776|gb|ACB38857.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878778|gb|ACB38858.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 230
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|406719426|dbj|BAM45022.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719428|dbj|BAM45023.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719430|dbj|BAM45024.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719432|dbj|BAM45025.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719434|dbj|BAM45026.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719442|dbj|BAM45030.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719444|dbj|BAM45031.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719448|dbj|BAM45033.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719452|dbj|BAM45035.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719492|dbj|BAM45055.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719496|dbj|BAM45057.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719500|dbj|BAM45059.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719502|dbj|BAM45060.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719504|dbj|BAM45061.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719506|dbj|BAM45062.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719508|dbj|BAM45063.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719510|dbj|BAM45064.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719512|dbj|BAM45065.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719524|dbj|BAM45071.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719528|dbj|BAM45073.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719532|dbj|BAM45075.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
Length = 219
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 6 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 65
Query: 154 DEL 156
DE+
Sbjct: 66 DEI 68
>gi|331267604|gb|AED02262.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 233
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 8 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 67
Query: 154 DEL 156
DE+
Sbjct: 68 DEI 70
>gi|331267584|gb|AED02252.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 241
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|140090316|gb|ABO85213.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
Length = 227
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|54288216|gb|AAV31553.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288248|gb|AAV31569.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288262|gb|AAV31576.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 228
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|389641339|ref|XP_003718302.1| DNA mismatch repair protein msh6 [Magnaporthe oryzae 70-15]
gi|351640855|gb|EHA48718.1| DNA mismatch repair protein msh6 [Magnaporthe oryzae 70-15]
gi|440466802|gb|ELQ36046.1| DNA mismatch repair protein msh6 [Magnaporthe oryzae Y34]
gi|440480286|gb|ELQ60960.1| DNA mismatch repair protein msh6 [Magnaporthe oryzae P131]
Length = 1218
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD +L NL V +NS N EGTL L+ C+T FGKR+ R + PL N+ I +R D
Sbjct: 625 VLDGQSLINLEVFSNSVNGGPEGTLFNLLNRCITPFGKRLFRQWVCHPLCNIKKINERLD 684
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L + I EQ + M + DLER++
Sbjct: 685 AVDMLNADRSILEQFSSLMSKMPDLERLI 713
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 1001 GCYVPAVSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1059
>gi|331267632|gb|AED02276.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 243
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|331267582|gb|AED02251.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 235
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 8 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 67
Query: 154 DEL 156
DE+
Sbjct: 68 DEI 70
>gi|54288154|gb|AAV31522.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288158|gb|AAV31524.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288170|gb|AAV31530.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288172|gb|AAV31531.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288174|gb|AAV31532.1| DNA mismatch repair protein [Ralstonia solanacearum CFBP2957]
gi|54288178|gb|AAV31534.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288180|gb|AAV31535.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288188|gb|AAV31539.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288194|gb|AAV31542.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288204|gb|AAV31547.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288206|gb|AAV31548.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288210|gb|AAV31550.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288212|gb|AAV31551.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288260|gb|AAV31575.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288278|gb|AAV31584.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|140090318|gb|ABO85214.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090320|gb|ABO85215.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090322|gb|ABO85216.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090324|gb|ABO85217.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090326|gb|ABO85218.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090328|gb|ABO85219.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090330|gb|ABO85220.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090334|gb|ABO85222.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090336|gb|ABO85223.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090338|gb|ABO85224.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090340|gb|ABO85225.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140417434|gb|ABO86760.1| MutS [Ralstonia solanacearum CFBP2957]
gi|140417438|gb|ABO86762.1| MutS [Ralstonia solanacearum]
gi|140417484|gb|ABO86785.1| MutS [Ralstonia solanacearum]
gi|140417486|gb|ABO86786.1| MutS [Ralstonia solanacearum]
gi|140417488|gb|ABO86787.1| MutS [Ralstonia solanacearum]
Length = 231
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|54288168|gb|AAV31529.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288214|gb|AAV31552.1| DNA mismatch repair protein [Ralstonia syzygii R24]
gi|54288218|gb|AAV31554.1| DNA mismatch repair protein [Ralstonia syzygii]
gi|54288240|gb|AAV31565.1| DNA mismatch repair protein [blood disease bacterium JT657]
gi|54288286|gb|AAV31588.1| DNA mismatch repair protein [blood disease bacterium JT656]
gi|54288298|gb|AAV31594.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 227
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|54288276|gb|AAV31583.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|140417490|gb|ABO86788.1| MutS [Ralstonia solanacearum]
gi|140417498|gb|ABO86792.1| MutS [Ralstonia solanacearum]
Length = 231
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|331267620|gb|AED02270.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 235
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 10 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 69
Query: 154 DEL 156
DE+
Sbjct: 70 DEI 72
>gi|331267570|gb|AED02245.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 229
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 7 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 66
Query: 154 DEL 156
DE+
Sbjct: 67 DEI 69
>gi|140417500|gb|ABO86793.1| MutS [Ralstonia solanacearum]
Length = 227
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|54288238|gb|AAV31564.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288244|gb|AAV31567.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|156105491|gb|ABU49202.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878698|gb|ACB38818.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878704|gb|ACB38821.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878718|gb|ACB38828.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878720|gb|ACB38829.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878722|gb|ACB38830.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878728|gb|ACB38833.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878730|gb|ACB38834.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878744|gb|ACB38841.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878802|gb|ACB38870.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878804|gb|ACB38871.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878808|gb|ACB38873.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878824|gb|ACB38881.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 227
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|406719450|dbj|BAM45034.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719494|dbj|BAM45056.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719498|dbj|BAM45058.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719514|dbj|BAM45066.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719520|dbj|BAM45069.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719522|dbj|BAM45070.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719526|dbj|BAM45072.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719534|dbj|BAM45076.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
Length = 218
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 6 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 65
Query: 154 DEL 156
DE+
Sbjct: 66 DEI 68
>gi|331267594|gb|AED02257.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 225
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 7 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 66
Query: 154 DEL 156
DE+
Sbjct: 67 DEI 69
>gi|54288160|gb|AAV31525.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288242|gb|AAV31566.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288306|gb|AAV31598.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 230
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|331267606|gb|AED02263.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 197
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 18 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 77
Query: 154 DEL 156
DE+
Sbjct: 78 DEI 80
>gi|331267592|gb|AED02256.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 190
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 8 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 67
Query: 154 DEL 156
DE+
Sbjct: 68 DEI 70
>gi|331267590|gb|AED02255.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|331267626|gb|AED02273.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 236
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 8 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 67
Query: 154 DEL 156
DE+
Sbjct: 68 DEI 70
>gi|331267578|gb|AED02249.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 238
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|170878732|gb|ACB38835.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 227
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|140090272|gb|ABO85191.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090276|gb|ABO85193.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090284|gb|ABO85197.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090296|gb|ABO85203.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090298|gb|ABO85204.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090300|gb|ABO85205.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
Length = 227
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|54288140|gb|AAV31515.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288246|gb|AAV31568.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288264|gb|AAV31577.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288268|gb|AAV31579.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288270|gb|AAV31580.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288272|gb|AAV31581.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288294|gb|AAV31592.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|140090264|gb|ABO85187.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090268|gb|ABO85189.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090302|gb|ABO85206.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090304|gb|ABO85207.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090306|gb|ABO85208.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090308|gb|ABO85209.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090310|gb|ABO85210.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090312|gb|ABO85211.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|156105483|gb|ABU49198.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|156105485|gb|ABU49199.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|156105487|gb|ABU49200.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|156105489|gb|ABU49201.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878700|gb|ACB38819.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878702|gb|ACB38820.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878706|gb|ACB38822.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878710|gb|ACB38824.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878712|gb|ACB38825.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878716|gb|ACB38827.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878724|gb|ACB38831.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878726|gb|ACB38832.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878736|gb|ACB38837.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878738|gb|ACB38838.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878750|gb|ACB38844.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878752|gb|ACB38845.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878756|gb|ACB38847.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878758|gb|ACB38848.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878780|gb|ACB38859.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878800|gb|ACB38869.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878806|gb|ACB38872.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878810|gb|ACB38874.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878814|gb|ACB38876.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878818|gb|ACB38878.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878822|gb|ACB38880.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878826|gb|ACB38882.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878828|gb|ACB38883.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878832|gb|ACB38885.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|442564907|dbj|BAM76225.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|442564909|dbj|BAM76226.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|442564911|dbj|BAM76227.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|442564913|dbj|BAM76228.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|442564915|dbj|BAM76229.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
Length = 227
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|54288146|gb|AAV31518.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|156105479|gb|ABU49196.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|156105493|gb|ABU49203.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878708|gb|ACB38823.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878714|gb|ACB38826.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878734|gb|ACB38836.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878740|gb|ACB38839.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878742|gb|ACB38840.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878746|gb|ACB38842.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878748|gb|ACB38843.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878754|gb|ACB38846.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878760|gb|ACB38849.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878762|gb|ACB38850.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878764|gb|ACB38851.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878766|gb|ACB38852.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878768|gb|ACB38853.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878770|gb|ACB38854.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878772|gb|ACB38855.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878774|gb|ACB38856.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878782|gb|ACB38860.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878784|gb|ACB38861.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878786|gb|ACB38862.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878788|gb|ACB38863.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878790|gb|ACB38864.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878792|gb|ACB38865.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878794|gb|ACB38866.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878796|gb|ACB38867.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878798|gb|ACB38868.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878812|gb|ACB38875.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878816|gb|ACB38877.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 224
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|331267598|gb|AED02259.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 195
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|331267576|gb|AED02248.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 193
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 10 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 69
Query: 154 DEL 156
DE+
Sbjct: 70 DEI 72
>gi|328771739|gb|EGF81778.1| hypothetical protein BATDEDRAFT_86831 [Batrachochytrium dendrobatidis
JAM81]
Length = 1194
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 42/59 (71%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA LTP DRIFTR+GA DN+ QST++ ELTE+ I+R A+ SL ++DEL
Sbjct: 979 GCYVPAAKCRLTPFDRIFTRIGASDNIMAGQSTFMVELTETSKILREATPRSLVILDEL 1037
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 62/119 (52%), Gaps = 4/119 (3%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L NL + NS D + GTL + L+ CVT FGKR+ + L PL ++D + R D
Sbjct: 649 ILDGQTLVNLELFENSSDGSDRGTLFKLLNQCVTPFGKRLFKLWLCHPLQSIDLLNSRLD 708
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRM 118
AI + + +R+ + L DLER++ + + C + L L DR+FT M
Sbjct: 709 AIDDFTSIVGLLDTVRSNISKLPDLERIVAR---IHTKSCHIKDFILALAAFDRVFTVM 764
>gi|54288302|gb|AAV31596.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 227
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|331267608|gb|AED02264.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 234
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 7 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 66
Query: 154 DEL 156
DE+
Sbjct: 67 DEI 69
>gi|331267586|gb|AED02253.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|331267610|gb|AED02265.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|331267614|gb|AED02267.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 191
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 8 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 67
Query: 154 DEL 156
DE+
Sbjct: 68 DEI 70
>gi|331267566|gb|AED02243.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 232
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 7 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 66
Query: 154 DEL 156
DE+
Sbjct: 67 DEI 69
>gi|359499666|gb|AEV53229.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499678|gb|AEV53235.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499682|gb|AEV53237.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum PSI07]
Length = 217
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|359499638|gb|AEV53215.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
Length = 217
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|134095352|ref|YP_001100427.1| DNA mismatch repair protein MutS [Herminiimonas arsenicoxydans]
Length = 870
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA S T+ P+DRIFTR+GA D+L+G +ST++ E+TES I+ A++ SL
Sbjct: 635 TLLAYVGSFVPATSATIGPIDRIFTRIGAADDLAGGRSTFMVEMTESAAILNGATENSLV 694
Query: 152 LVDEL 156
L+DE+
Sbjct: 695 LMDEV 699
>gi|54288164|gb|AAV31527.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|140090270|gb|ABO85190.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090274|gb|ABO85192.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090278|gb|ABO85194.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090280|gb|ABO85195.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090286|gb|ABO85198.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090288|gb|ABO85199.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|140090290|gb|ABO85200.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
Length = 227
Score = 74.3 bits (181), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|331267630|gb|AED02275.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 238
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 10 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 69
Query: 154 DEL 156
DE+
Sbjct: 70 DEI 72
>gi|359499640|gb|AEV53216.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499680|gb|AEV53236.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
Length = 217
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|331267612|gb|AED02266.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 191
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 8 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 67
Query: 154 DEL 156
DE+
Sbjct: 68 DEI 70
>gi|359499628|gb|AEV53210.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
Length = 217
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|331267622|gb|AED02271.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 246
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 18 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 77
Query: 154 DEL 156
DE+
Sbjct: 78 DEI 80
>gi|260815207|ref|XP_002602365.1| hypothetical protein BRAFLDRAFT_283756 [Branchiostoma floridae]
gi|229287674|gb|EEN58377.1| hypothetical protein BRAFLDRAFT_283756 [Branchiostoma floridae]
Length = 1278
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S LTP+DR+FTR+GA D + +ST+ EL+E+ +I++HA+ +SL L+DEL
Sbjct: 1100 GCYVPAQSCRLTPIDRVFTRLGASDRIMSGESTFFVELSETSSILQHATCHSLVLLDEL 1158
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL ++ NS + EGTL+++LD C T FGKR+ + L PL N +I R D
Sbjct: 675 VLDGVTLNNLEIIENSVTGSREGTLLDRLDMCCTPFGKRLFKQWLCAPLCNPASINDRLD 734
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L+ + + ++ ++ + DLER+L
Sbjct: 735 AVEDLMACRDVVAEVTEILRKVPDLERLL 763
>gi|359499618|gb|AEV53205.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
Length = 217
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|156603520|ref|XP_001618850.1| hypothetical protein NEMVEDRAFT_v1g153129 [Nematostella vectensis]
gi|156200632|gb|EDO26750.1| predicted protein [Nematostella vectensis]
Length = 61
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTPVDR+FTR+GA D + +ST+ EL+E+ TI+RH+++ SL L+DEL
Sbjct: 1 GCYVPAELCRLTPVDRVFTRLGAHDRILAGESTFFVELSETATILRHSTRDSLVLLDEL 59
>gi|170878820|gb|ACB38879.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|170878830|gb|ACB38884.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 224
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|221222520|sp|A4G717.3|MUTS_HERAR RecName: Full=DNA mismatch repair protein MutS
gi|193222369|emb|CAL62304.2| DNA mismatch repair protein MutS [Herminiimonas arsenicoxydans]
Length = 893
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA S T+ P+DRIFTR+GA D+L+G +ST++ E+TES I+ A++ SL
Sbjct: 658 TLLAYVGSFVPATSATIGPIDRIFTRIGAADDLAGGRSTFMVEMTESAAILNGATENSLV 717
Query: 152 LVDEL 156
L+DE+
Sbjct: 718 LMDEV 722
>gi|359499604|gb|AEV53198.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499606|gb|AEV53199.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499626|gb|AEV53209.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499644|gb|AEV53218.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499646|gb|AEV53219.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499650|gb|AEV53221.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499652|gb|AEV53222.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499654|gb|AEV53223.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499656|gb|AEV53224.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499658|gb|AEV53225.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499668|gb|AEV53230.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499670|gb|AEV53231.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499674|gb|AEV53233.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499676|gb|AEV53234.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499694|gb|AEV53243.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum UW551]
Length = 217
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|149242560|pdb|2O8B|B Chain B, Human Mutsalpha (Msh2MSH6) BOUND TO ADP AND A G T MISPAIR
gi|149242564|pdb|2O8C|B Chain B, Human Mutsalpha (msh2/msh6) Bound To Adp And An
O6-methyl-guanine T Mispair
gi|149242568|pdb|2O8D|B Chain B, Human Mutsalpha (Msh2MSH6) BOUND TO ADP AND A G DU MISPAIR
gi|149242572|pdb|2O8E|B Chain B, Human Mutsalpha (Msh2MSH6) BOUND TO A G T MISPAIR, WITH
ADP BOUND TO Msh2 Only
gi|149242576|pdb|2O8F|B Chain B, Human Mutsalpha (Msh2MSH6) BOUND TO DNA WITH A SINGLE BASE
T INSERT
Length = 1022
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 819 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILMHATAHSLVLVDEL 877
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL N AI R D
Sbjct: 396 VLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCNHYAINDRLD 455
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 456 AIEDLMVVPDKISEVVELLKKLPDLERLL 484
>gi|126304451|ref|XP_001382177.1| PREDICTED: DNA mismatch repair protein Msh6 [Monodelphis domestica]
Length = 1423
Score = 74.3 bits (181), Expect = 2e-11, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 57/89 (64%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L+NL +L N+ N +TEGTL+E++D C T FGKR+L+ L PL N +I R D
Sbjct: 795 VLDAVTLSNLEILQNAVNGSTEGTLLERIDSCCTPFGKRLLKHWLCAPLCNPSSINDRLD 854
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L+ T ++ +K L DLER+L
Sbjct: 855 AMEDLMAVPDKTSEVVDLLKKLPDLERLL 883
Score = 72.4 bits (176), Expect = 6e-11, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ TPVDR+FTR+GA D + +ST+ E+ E+ +I++HA+++SL L+DEL
Sbjct: 1220 GCYVPAEVCNFTPVDRVFTRLGASDRIMSGESTFFVEMNETASILQHATEHSLVLMDEL 1278
>gi|154293501|ref|XP_001547279.1| hypothetical protein BC1G_13901 [Botryotinia fuckeliana B05.10]
Length = 737
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 49/71 (69%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + ++ GC VPA S TLTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A
Sbjct: 497 RMTCVAVIMAQLGCYVPAKSATLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEA 556
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 557 TPRSLVILDEL 567
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + +N+ D ++GTL LD C T FGKR+ R + PL+++ I +R D
Sbjct: 132 VLDGQTLINLEIFSNTFDGNSDGTLYTLLDRCTTPFGKRLFRQWVSHPLSDIKRINERLD 191
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L ++ ++ + DLER++
Sbjct: 192 AVDFLNRDNELSRSFKSSTSAMPDLERLI 220
>gi|449686518|ref|XP_002161963.2| PREDICTED: DNA mismatch repair protein Msh6-like, partial [Hydra
magnipapillata]
Length = 543
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 48/88 (54%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD L NL + NSD T GTL++ LD CVT FGKR + PL AI R DA
Sbjct: 342 VLDGITLTNLEITVNSDGNTNGTLLQLLDQCVTMFGKRTFMQWICSPLCGKAAIDNRLDA 401
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ L+ + + R MK + DLER+L
Sbjct: 402 VEDLMSIPSLISEARTVMKSIPDLERIL 429
>gi|37496418|emb|CAC88861.1| MutS protein [Ralstonia solanacearum]
Length = 696
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 604 VLLAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLV 663
Query: 152 LVDEL 156
L+DE+
Sbjct: 664 LMDEI 668
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 43/94 (45%), Gaps = 2/94 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + TL LD C TS G R+LR L PL + + RQ AI
Sbjct: 241 LDTATRRNLELTETLRGQESPTLFSLLDTCATSMGSRLLRHWLHHPLRDRAVPQARQQAI 300
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLS 95
VLL + +R ++ L D+ER+ LS
Sbjct: 301 EVLLAGDW--QSLRGTLRTLSDVERITGRLALLS 332
>gi|359499608|gb|AEV53200.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499610|gb|AEV53201.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499612|gb|AEV53202.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499614|gb|AEV53203.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499616|gb|AEV53204.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499620|gb|AEV53206.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499622|gb|AEV53207.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499624|gb|AEV53208.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499632|gb|AEV53212.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499634|gb|AEV53213.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499636|gb|AEV53214.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499648|gb|AEV53220.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499660|gb|AEV53226.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499664|gb|AEV53228.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
gi|359499672|gb|AEV53232.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
Length = 217
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|194388224|dbj|BAG65496.1| unnamed protein product [Homo sapiens]
Length = 1058
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 855 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILMHATAHSLVLVDEL 913
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL N AI R D
Sbjct: 432 VLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCNHYAINDRLD 491
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 492 AIEDLMVVPDKISEVVELLKKLPDLERLL 520
>gi|54288284|gb|AAV31587.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288296|gb|AAV31593.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 227
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|403260724|ref|XP_003922808.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 1228
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1025 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILSHATAHSLVLVDEL 1083
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N + EGTL+E++D C T FGKR+L+ L PL + AI R D
Sbjct: 603 VLDAVTLNNLEIFLNGTNGSAEGTLLERVDTCHTPFGKRLLKQWLCAPLCSPYAINDRLD 662
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 663 AIEDLMAVPDKISEVVELLKKLPDLERLL 691
>gi|312178717|gb|ADQ39296.1| DNA mismatch repair protein [uncultured bacterium]
Length = 558
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 50/63 (79%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L+ G VPA+SL L P+DRIFTR+GA D+L+G +ST++ E+TE+ TI+ +A++ SL L+
Sbjct: 340 LAHVGSFVPAESLRLGPIDRIFTRIGASDDLAGGRSTFMVEMTETATILNNATEQSLVLM 399
Query: 154 DEL 156
DE+
Sbjct: 400 DEI 402
>gi|268564536|ref|XP_002639138.1| C. briggsae CBR-MSH-6 protein [Caenorhabditis briggsae]
Length = 1185
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/63 (52%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L+ GC VPA S+ LTP+DRIFTR+GA D + +ST+ EL E++ ++++A+K+SL LV
Sbjct: 980 LAHMGCMVPAFSMRLTPIDRIFTRIGANDRIMCGESTFFIELKETDIMLKNATKHSLLLV 1039
Query: 154 DEL 156
DEL
Sbjct: 1040 DEL 1042
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD T L NL+++ N ++ +L L+ C T FG+R+LR+ L++P + ++ RQ+A
Sbjct: 571 ILDGTVLENLNIVPNGRDSHLTSLYYVLNKCSTPFGRRLLRSWLLQPTCDPATLRLRQEA 630
Query: 61 ISVLL--DQKHITEQMRAKMKDLRDLERML 88
I ++ D + A +K + DL+R+L
Sbjct: 631 IKWMISSDAESFFSTAIATLKKIPDLDRLL 660
>gi|417413734|gb|JAA53181.1| Putative mismatch repair atpase msh2 muts family, partial [Desmodus
rotundus]
Length = 1280
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1077 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILTHATAHSLVLVDEL 1135
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LDS L NL + N N +TEGTL+E++D C T FGKR+L+ L PL N AI R D
Sbjct: 653 VLDSVTLNNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCNPFAINDRLD 712
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 713 AIEDLMVVPDKIPELADLLKKLPDLERLL 741
>gi|54288150|gb|AAV31520.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 228
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|71907966|ref|YP_285553.1| DNA mismatch repair protein MutS [Dechloromonas aromatica RCB]
gi|90109845|sp|Q47DJ8.1|MUTS_DECAR RecName: Full=DNA mismatch repair protein MutS
gi|71847587|gb|AAZ47083.1| DNA mismatch repair protein MutS [Dechloromonas aromatica RCB]
Length = 860
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD L P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ HA+ SL
Sbjct: 637 ALLAHIGCYVPADRCVLGPLDRIFTRIGASDDLASGRSTFMVEMTEAAAILHHATNQSLV 696
Query: 152 LVDEL 156
L+DE+
Sbjct: 697 LMDEI 701
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLL-DQKHITEQMRAKMKDL 81
TL LD+CVTS G R+LR L PL D R A+ LL D + ++R ++ +
Sbjct: 289 TLFSLLDNCVTSMGSRLLRHTLHHPLRARDIPAARHGAVEALLEDYGRLGNEVRKALRGI 348
Query: 82 RDLERM 87
D+ER+
Sbjct: 349 ADIERI 354
>gi|149374515|ref|ZP_01892289.1| DNA mismatch repair protein [Marinobacter algicola DG893]
gi|149361218|gb|EDM49668.1| DNA mismatch repair protein [Marinobacter algicola DG893]
Length = 877
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 50/64 (78%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA+ + + P+DRIFTRMG+ D+++G +ST++ E+TE+ I+ +A++YSL L
Sbjct: 635 LLAYTGSYVPANRVVIGPLDRIFTRMGSSDDIAGGRSTFMVEMTETANILHNATEYSLVL 694
Query: 153 VDEL 156
+DE+
Sbjct: 695 MDEV 698
Score = 60.8 bits (146), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+T+ NL + TN T+ TL +D T+ G R LR L +PL ++ ++QRQ A
Sbjct: 269 ILDATSRRNLEIDTNLMGGTQHTLAWVMDRTATAMGGRQLRRWLNRPLRDITVVEQRQQA 328
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+S LLD H E + +K + D+ER+L
Sbjct: 329 VSALLDGFHY-EPVHDLLKSIGDIERIL 355
>gi|17545870|ref|NP_519272.1| DNA mismatch repair protein MutS [Ralstonia solanacearum GMI1000]
gi|44888233|sp|Q8Y093.1|MUTS_RALSO RecName: Full=DNA mismatch repair protein MutS
gi|17428165|emb|CAD14853.1| probable dna mismatch repair protein muts [Ralstonia solanacearum
GMI1000]
Length = 882
Score = 74.3 bits (181), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 646 VLLAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLV 705
Query: 152 LVDEL 156
L+DE+
Sbjct: 706 LMDEI 710
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + TL LD C TS G R+LR L PL + + RQ AI
Sbjct: 283 LDTATRRNLELTETLRGQESPTLFSLLDTCATSMGSRLLRHWLHHPLRDRAVPQARQQAI 342
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
VLL + +R ++ L D+ER+
Sbjct: 343 EVLLAGD--WQSLRGTLRTLSDVERI 366
>gi|440795533|gb|ELR16653.1| MutS domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 1266
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 47/66 (71%)
Query: 91 STFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSL 150
S ++ GC VPA LTPVDRIFTR+GA DN+ QST++ EL E+ I+++A+ +SL
Sbjct: 1047 SVIMAQMGCYVPASICRLTPVDRIFTRIGANDNIMAGQSTFMVELQETANILKNATAHSL 1106
Query: 151 ALVDEL 156
++DEL
Sbjct: 1107 VIMDEL 1112
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + N+ D GTL+ +DHCVT FGKR+ + + KPL ++ I+ R +
Sbjct: 664 VLDGKTLTNLEIFENNFDKGVAGTLLNVMDHCVTPFGKRLFKRWIAKPLRRVEDIEDRLN 723
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L ++ + + + ++K L DLER +
Sbjct: 724 AVEDLNERPELRDALWEQLKSLPDLERAI 752
>gi|449685383|ref|XP_002165963.2| PREDICTED: DNA mismatch repair protein Msh6-like [Hydra
magnipapillata]
Length = 354
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA+ TPVDR+FTR+GA+D + +ST+ EL+E+ TI RHA+K+SL L+DEL
Sbjct: 158 GSYVPAEVCRFTPVDRVFTRLGARDRILHGESTFFVELSETSTIFRHATKHSLVLLDEL 216
>gi|421888623|ref|ZP_16319707.1| methyl-directed DNA mismatch repair protein [Ralstonia solanacearum
K60-1]
gi|378966020|emb|CCF96455.1| methyl-directed DNA mismatch repair protein [Ralstonia solanacearum
K60-1]
Length = 883
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 646 VLLAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLV 705
Query: 152 LVDEL 156
L+DE+
Sbjct: 706 LMDEI 710
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + TL LD C TS G R+LR L PL + + RQ AI
Sbjct: 283 LDTATRRNLELTETLRGQESPTLFSLLDTCSTSMGSRLLRHWLHHPLRDRAVPQARQQAI 342
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
VL+ + +R ++ L D+ER+
Sbjct: 343 EVLMAGD--WQSLRGTLRTLSDVERI 366
>gi|350564311|ref|ZP_08933129.1| DNA mismatch repair protein MutS [Thioalkalimicrobium aerophilum
AL3]
gi|349777789|gb|EGZ32151.1| DNA mismatch repair protein MutS [Thioalkalimicrobium aerophilum
AL3]
Length = 875
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ GC VPA P+DRIFTR+GA D+L+ +ST++ E+TE+ I+RHAS SL
Sbjct: 631 TIMAHMGCFVPAKQACFGPIDRIFTRIGASDDLTSGRSTFMVEMTETAHILRHASAESLI 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEV 695
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 49/89 (55%), Gaps = 3/89 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + T+ TL LDHC T G R+LR L +PL + I QR
Sbjct: 268 ILDAITRRNLELDTHQQGFQHHTLFHLLDHCQTPMGSRLLRRWLRQPLRRREQILQRLSV 327
Query: 61 ISVL-LDQKHITEQMRAKMKDLRDLERML 88
+ L ++Q+H Q++A +K + DLER+L
Sbjct: 328 VDCLVMNQQH--SQLQAHLKPIGDLERIL 354
>gi|47228957|emb|CAG09472.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1235
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 37/88 (42%), Positives = 53/88 (60%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D LANL + N EGTL+E+LD C T FGKR+L+ L PL N +IK+R DA
Sbjct: 633 VVDGVTLANLEIFQNGSGGAEGTLLERLDTCSTPFGKRLLKQWLCAPLCNPSSIKERLDA 692
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ L+ + ++ +K L DLER+L
Sbjct: 693 VEDLMGLQAQAGEVSDLLKKLPDLERLL 720
Score = 43.1 bits (100), Expect = 0.033, Method: Composition-based stats.
Identities = 25/71 (35%), Positives = 39/71 (54%), Gaps = 2/71 (2%)
Query: 88 LPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNL--SGAQSTYLAELTESETIMRHA 145
+P+ F+ +G + T V MG K L +ST+ EL+E+ +I+RHA
Sbjct: 1040 IPNDIFIGCRGSGEEEEKGDATCVLVTGPNMGGKSTLMRQARESTFFVELSETASILRHA 1099
Query: 146 SKYSLALVDEL 156
+K+SL L+DEL
Sbjct: 1100 TKHSLVLLDEL 1110
>gi|300704478|ref|YP_003746081.1| methyl-directed DNA mismatch repair protein [Ralstonia solanacearum
CFBP2957]
gi|299072142|emb|CBJ43474.1| methyl-directed DNA mismatch repair protein [Ralstonia solanacearum
CFBP2957]
Length = 886
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 646 VLLAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLV 705
Query: 152 LVDEL 156
L+DE+
Sbjct: 706 LMDEI 710
Score = 42.0 bits (97), Expect = 0.082, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 40/86 (46%), Gaps = 2/86 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + TL LD C TS G R+LR L PL + + RQ AI
Sbjct: 283 LDTATRRNLELTETLRGQESPTLFSLLDTCSTSMGSRLLRHWLHHPLRDRAVPQARQQAI 342
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
LL + +R ++ L D+ER+
Sbjct: 343 EELLAGD--WQSLRGTLRTLSDVERI 366
>gi|221133350|ref|ZP_03559655.1| DNA mismatch repair protein(MutS) [Glaciecola sp. HTCC2999]
Length = 874
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ GC VPA + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +AS++SL L
Sbjct: 644 LLAYIGCYVPAQRCQIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNASEHSLVL 703
Query: 153 VDEL 156
+DE+
Sbjct: 704 MDEI 707
Score = 35.8 bits (81), Expect = 5.8, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 44/87 (50%), Gaps = 2/87 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D NL + N E T+ + L++ T G R+L+ + +P+T + ++QR + I
Sbjct: 280 MDFATRKNLELTHNLSGGIENTVFDVLNNTQTPMGARLLQQWIHRPITQQNLLEQRYNVI 339
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
L++ H +K + D++R+L
Sbjct: 340 DSLVE--HDVAAPAQILKKMGDVQRIL 364
>gi|299067203|emb|CBJ38399.1| methyl-directed DNA mismatch repair protein [Ralstonia solanacearum
CMR15]
Length = 882
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 646 VLLAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLV 705
Query: 152 LVDEL 156
L+DE+
Sbjct: 706 LMDEI 710
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + TL LD C TS G R+LR L PL + + RQ AI
Sbjct: 283 LDTATRRNLELTETLRGQESPTLFSLLDTCATSMGSRLLRHWLHHPLRDRAVPQARQQAI 342
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
VLL + +R ++ L D+ER+
Sbjct: 343 EVLLAGD--WQSLRGTLRTLSDVERI 366
>gi|386333881|ref|YP_006030052.1| DNA mismatch repair protein MutS [Ralstonia solanacearum Po82]
gi|334196331|gb|AEG69516.1| DNA mismatch repair protein MutS [Ralstonia solanacearum Po82]
Length = 885
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 646 VLLAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLV 705
Query: 152 LVDEL 156
L+DE+
Sbjct: 706 LMDEI 710
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + TL LD C TS G R+LR L PL + + RQ AI
Sbjct: 283 LDTATRRNLELTETLRGQESPTLFSLLDTCSTSMGSRLLRHWLHHPLRDRAVPQARQQAI 342
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
VLL + +R ++ L D+ER+
Sbjct: 343 EVLLAGD--WQSLRGTLRTLSDVERI 366
>gi|421896907|ref|ZP_16327302.1| dna mismatch repair protein muts [Ralstonia solanacearum MolK2]
gi|206588072|emb|CAQ18652.1| dna mismatch repair protein muts [Ralstonia solanacearum MolK2]
Length = 885
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 646 VLLAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLV 705
Query: 152 LVDEL 156
L+DE+
Sbjct: 706 LMDEI 710
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + TL LD C TS G R+LR L PL + + RQ AI
Sbjct: 283 LDTATRRNLELTETLRGQESPTLFSLLDTCSTSMGSRLLRHWLHHPLRDRAVPQARQQAI 342
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
VLL + +R ++ L D+ER+
Sbjct: 343 EVLLAGD--WQSLRGTLRTLSDVERI 366
>gi|426223707|ref|XP_004023308.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh6
[Ovis aries]
Length = 1352
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1149 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILTHATAHSLVLVDEL 1207
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L+NL + N N +TEGTL+E++D C T FGKR+L+ L PL N AI R D
Sbjct: 725 VLDAVTLSNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCNPHAINDRLD 784
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 785 AIEDLMVVPDKISEVVDLLKKLPDLERLL 813
>gi|300691868|ref|YP_003752863.1| methyl-directed DNA mismatch repair protein [Ralstonia solanacearum
PSI07]
gi|299078928|emb|CBJ51588.1| methyl-directed DNA mismatch repair protein [Ralstonia solanacearum
PSI07]
gi|344167055|emb|CCA79248.1| methyl-directed DNA mismatch repair protein [blood disease
bacterium R229]
Length = 882
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 646 VLLAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLV 705
Query: 152 LVDEL 156
L+DE+
Sbjct: 706 LMDEI 710
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + TL LD C TS G R+LR L PL + + RQ AI
Sbjct: 283 LDTATRRNLELTETLRGQESPTLFSLLDTCATSMGSRLLRHWLHHPLRDRAVPQARQQAI 342
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
VLL + +R ++ L D+ER+
Sbjct: 343 EVLLAGD--WQSLRGTLRTLSDVERI 366
>gi|194220748|ref|XP_001498011.2| PREDICTED: DNA mismatch repair protein Msh6-like [Equus caballus]
Length = 983
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 780 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILTHATAHSLVLVDEL 838
>gi|431912701|gb|ELK14719.1| DNA mismatch repair protein Msh6 [Pteropus alecto]
Length = 1172
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 969 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILTHATAHSLVLVDEL 1027
>gi|83748240|ref|ZP_00945266.1| MutS [Ralstonia solanacearum UW551]
gi|207743508|ref|YP_002259900.1| dna mismatch repair protein muts [Ralstonia solanacearum IPO1609]
gi|83725081|gb|EAP72233.1| MutS [Ralstonia solanacearum UW551]
gi|206594906|emb|CAQ61833.1| dna mismatch repair protein muts [Ralstonia solanacearum IPO1609]
Length = 885
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 646 VLLAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLV 705
Query: 152 LVDEL 156
L+DE+
Sbjct: 706 LMDEI 710
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 30/86 (34%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + TL LD C TS G R+LR L PL + + RQ AI
Sbjct: 283 LDTATRRNLELTETLRGQESPTLFSLLDTCSTSMGSRLLRHWLHHPLRDRAVPQARQQAI 342
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
VLL + +R ++ L D+ER+
Sbjct: 343 EVLLAGD--WQSLRGTLRTLSDVERI 366
>gi|4504191|ref|NP_000170.1| DNA mismatch repair protein Msh6 [Homo sapiens]
gi|68067672|sp|P52701.2|MSH6_HUMAN RecName: Full=DNA mismatch repair protein Msh6; Short=hMSH6; AltName:
Full=G/T mismatch-binding protein; Short=GTBP;
Short=GTMBP; AltName: Full=MutS-alpha 160 kDa subunit;
Short=p160
gi|1294813|gb|AAC50461.1| G/T mismatch binding protein [Homo sapiens]
gi|6063479|gb|AAB39212.2| hMSH6 protein [Homo sapiens]
gi|13279008|gb|AAH04246.1| MutS homolog 6 (E. coli) [Homo sapiens]
gi|119620614|gb|EAX00209.1| mutS homolog 6 (E. coli), isoform CRA_b [Homo sapiens]
gi|123987976|gb|ABM83824.1| mutS homolog 6 (E. coli) [synthetic construct]
gi|307684536|dbj|BAJ20308.1| mutS homolog 6 [synthetic construct]
Length = 1360
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1157 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILMHATAHSLVLVDEL 1215
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL N AI R D
Sbjct: 734 VLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCNHYAINDRLD 793
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 794 AIEDLMVVPDKISEVVELLKKLPDLERLL 822
>gi|224104179|ref|XP_002333974.1| predicted protein [Populus trichocarpa]
gi|222839403|gb|EEE77740.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 36/65 (55%), Positives = 48/65 (73%), Gaps = 1/65 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD+ AL NL + NS N T GTL QL+HCVT+FGKR+L+ L +PL +L++IK RQD
Sbjct: 688 ILDAAALENLEIFENSRNGDTSGTLYAQLNHCVTAFGKRLLKTWLARPLYHLESIKDRQD 747
Query: 60 AISVL 64
A++ L
Sbjct: 748 AVAGL 752
>gi|194375916|dbj|BAG57302.1| unnamed protein product [Homo sapiens]
Length = 1230
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1027 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILMHATAHSLVLVDEL 1085
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL N AI R D
Sbjct: 604 VLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCNHYAINDRLD 663
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 664 AIEDLMVVPDKISEVVELLKKLPDLERLL 692
>gi|452846757|gb|EME48689.1| hypothetical protein DOTSEDRAFT_141977 [Dothistroma septosporum
NZE10]
Length = 1041
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD +L NL + N+ D +TEGTL L+ CVT FGKRMLR + PL + I QR D
Sbjct: 444 VLDGQSLINLEIFANTFDGSTEGTLFTMLNRCVTPFGKRMLRQWVCHPLADARKINQRFD 503
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L + ++ A + L DLER++
Sbjct: 504 AIEALNADGTVMDRFCASLSKLPDLERLI 532
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + L+ GC VP DS +TPVDRI +R+GA DN+ QST++ EL+E++ I+ A
Sbjct: 811 RMTCVAVILAQIGCYVPCDSARMTPVDRIMSRLGAHDNIFAGQSTFMVELSETKKILAEA 870
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 871 TPRSLVILDEL 881
>gi|300794942|ref|NP_001179666.1| DNA mismatch repair protein Msh6 [Bos taurus]
gi|296482664|tpg|DAA24779.1| TPA: mutS homolog 6 [Bos taurus]
Length = 1360
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1157 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILTHATAHSLVLVDEL 1215
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL N AI R D
Sbjct: 733 VLDAVTLNNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCNPHAINDRLD 792
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 793 AIEDLMVVPDKISEVVDLLKKLPDLERLL 821
>gi|291386823|ref|XP_002709926.1| PREDICTED: mutS homolog 6 [Oryctolagus cuniculus]
Length = 1361
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1158 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILTHATAHSLVLVDEL 1216
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL V N N +TEGTL+E++D C T FGKR+L+ L PL + AI R D
Sbjct: 734 VLDAVTLNNLEVFLNGTNGSTEGTLLEKIDTCYTPFGKRLLKHWLCAPLCSPCAINDRLD 793
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 794 AIEDLMAVPDKVSEVVDLLKKLPDLERLL 822
>gi|440906162|gb|ELR56463.1| DNA mismatch repair protein Msh6 [Bos grunniens mutus]
Length = 1361
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1158 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILTHATAHSLVLVDEL 1216
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL N AI R D
Sbjct: 734 VLDAVTLNNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCNPHAINDRLD 793
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 794 AIEDLMVVPDKISEVVDLLKKLPDLERLL 822
>gi|426335494|ref|XP_004029255.1| PREDICTED: DNA mismatch repair protein Msh6 [Gorilla gorilla gorilla]
Length = 1230
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1027 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILMHATAHSLVLVDEL 1085
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL N AI R D
Sbjct: 604 VLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCNPYAINDRLD 663
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 664 AIEDLMVVPDKISEVVELLKKLPDLERLL 692
>gi|19548099|gb|AAL87401.1| mutS homolog 6 (E. coli) [Homo sapiens]
Length = 1358
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1157 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILMHATAHSLVLVDEL 1215
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL N AI R D
Sbjct: 734 VLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCNHYAINDRLD 793
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 794 AIEDLMVVPDKISEVVELLKKLPDLERLL 822
>gi|297667666|ref|XP_002812093.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 2 [Pongo abelii]
Length = 1232
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1029 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILMHATAHSLVLVDEL 1087
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL N AI R D
Sbjct: 606 VLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCNPFAINDRLD 665
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 666 AIEDLMVVPDKISEVVELLKRLPDLERLL 694
>gi|402890846|ref|XP_003908684.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 2 [Papio anubis]
Length = 1230
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1027 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILMHATAHSLVLVDEL 1085
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL + AI R D
Sbjct: 604 VLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCSPYAINDRLD 663
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 664 AIEDLMVVPDKISEVVELLKKLPDLERLL 692
>gi|296223907|ref|XP_002807586.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
Msh6-like, partial [Callithrix jacchus]
Length = 1223
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1020 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILSHATAHSLVLVDEL 1078
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N + EGTL+E++D C T FGKR+L+ L PL + AI R D
Sbjct: 597 VLDAVTLNNLEIFLNGTNGSAEGTLLERVDTCHTPFGKRLLKQWLCAPLCSPYAINDRLD 656
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 657 AIEDLMVVPEKISEVVELLKKLPDLERLL 685
>gi|140090294|gb|ABO85202.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
Length = 227
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/63 (49%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|297667664|ref|XP_002812092.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 1 [Pongo abelii]
Length = 1362
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1159 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILMHATAHSLVLVDEL 1217
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL N AI R D
Sbjct: 736 VLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCNPFAINDRLD 795
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 796 AIEDLMVVPDKISEVVELLKRLPDLERLL 824
>gi|407009237|gb|EKE24416.1| hypothetical protein ACD_6C00128G0002 [uncultured bacterium]
Length = 877
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPA + TL PVDR+FTR+G+ D+LS +ST++ E+TE+ I+ HA+ +SL
Sbjct: 644 VLLAYCGAYVPAQAATLGPVDRVFTRIGSADDLSTGKSTFMVEMTETSQILHHATSHSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 39.3 bits (90), Expect = 0.53, Method: Compositional matrix adjust.
Identities = 34/117 (29%), Positives = 55/117 (47%), Gaps = 7/117 (5%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++PL + + +R DAI LL H +R +K++
Sbjct: 297 SLFQLINDCQTAMGGRLLSRTLMQPLRDTALLDERLDAIQALLQGFHEVP-VRLVLKEIS 355
Query: 83 DLERMLPSSTFLSFQGCRVPADSLTL--TPVDRIFTRMGAKDNLSGAQSTYLAELTE 137
D+ER+L G P D + L F R + +S QS L +L E
Sbjct: 356 DIERVLSRIAL----GSARPRDLVQLRQACAQIPFLRHALQPIVSQQQSKLLVQLNE 408
>gi|347840481|emb|CCD55053.1| similar to DNA mismatch repair protein msh6 [Botryotinia fuckeliana]
Length = 1213
Score = 73.9 bits (180), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S TLTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 985 GCYVPAKSATLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1043
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + +N+ D ++GTL LD C T FGKR+ R + PL+++ I +R D
Sbjct: 608 VLDGQTLINLEIFSNTFDGNSDGTLYTLLDRCTTPFGKRLFRQWVSHPLSDIKRINERLD 667
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L ++ ++ + DLER++
Sbjct: 668 AVDFLNRDNELSRSFKSSTSAMPDLERLI 696
>gi|332813367|ref|XP_003309101.1| PREDICTED: DNA mismatch repair protein Msh6 [Pan troglodytes]
Length = 1399
Score = 73.9 bits (180), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1196 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILMHATAHSLVLVDEL 1254
Score = 69.3 bits (168), Expect = 6e-10, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL N AI R D
Sbjct: 773 VLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCNPYAINDRLD 832
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 833 AIEDLMVVPDKISEVVELLKKLPDLERLL 861
>gi|402086031|gb|EJT80929.1| DNA mismatch repair protein msh6 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1236
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD +L NL + +NS N EGTL L+ C+T FGKR+ R + PL N I +R D
Sbjct: 643 ILDGQSLINLEIFSNSVNGGPEGTLFSLLNRCITPFGKRLFRQWVCHPLCNTQKINERLD 702
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L + I EQ + M + DLER++
Sbjct: 703 AVDMLNADRSIREQFSSLMSKMPDLERLI 731
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 1019 GCYVPARSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1077
>gi|402086030|gb|EJT80928.1| DNA mismatch repair protein msh6, variant [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 1235
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD +L NL + +NS N EGTL L+ C+T FGKR+ R + PL N I +R D
Sbjct: 642 ILDGQSLINLEIFSNSVNGGPEGTLFSLLNRCITPFGKRLFRQWVCHPLCNTQKINERLD 701
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L + I EQ + M + DLER++
Sbjct: 702 AVDMLNADRSIREQFSSLMSKMPDLERLI 730
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 1018 GCYVPARSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1076
>gi|403260722|ref|XP_003922807.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 1358
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1155 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILSHATAHSLVLVDEL 1213
Score = 65.5 bits (158), Expect = 7e-09, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N + EGTL+E++D C T FGKR+L+ L PL + AI R D
Sbjct: 733 VLDAVTLNNLEIFLNGTNGSAEGTLLERVDTCHTPFGKRLLKQWLCAPLCSPYAINDRLD 792
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 793 AIEDLMAVPDKISEVVELLKKLPDLERLL 821
>gi|399021417|ref|ZP_10723523.1| DNA mismatch repair protein MutS [Herbaspirillum sp. CF444]
gi|398091870|gb|EJL82296.1| DNA mismatch repair protein MutS [Herbaspirillum sp. CF444]
Length = 905
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 50/65 (76%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA + T+ P+DRIFTR+GA D+L+G +ST++ E+TES I+ +A++ SL
Sbjct: 662 TLLAYIGSFVPATNATIGPIDRIFTRIGAADDLAGGRSTFMVEMTESAAILNNATENSLV 721
Query: 152 LVDEL 156
L+DE+
Sbjct: 722 LMDEV 726
>gi|335285527|ref|XP_003354884.1| PREDICTED: DNA mismatch repair protein Msh6-like [Sus scrofa]
Length = 1362
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1159 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILTHATAHSLVLVDEL 1217
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N+ N + EGTL+E++D C T FGKR+L+ L PL N AI R D
Sbjct: 735 VLDAVTLNNLEIFLNATNGSPEGTLLEKIDTCHTPFGKRLLKQWLCAPLCNPYAISDRLD 794
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 795 AIEDLMVVPDKISEVVDLLKKLPDLERLL 823
>gi|170727679|ref|YP_001761705.1| DNA mismatch repair protein MutS [Shewanella woodyi ATCC 51908]
gi|238688717|sp|B1KPS7.1|MUTS_SHEWM RecName: Full=DNA mismatch repair protein MutS
gi|169813026|gb|ACA87610.1| DNA mismatch repair protein MutS [Shewanella woodyi ATCC 51908]
Length = 858
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ GC VPA S T+ PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL
Sbjct: 635 TLMAHIGCYVPAQSATIGPVDRIFTRIGAADDLASGRSTFMVEMTETANILHNATPKSLV 694
Query: 152 LVDEL 156
L+DE+
Sbjct: 695 LMDEI 699
Score = 42.7 bits (99), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N TL LD+ T G RML+ + +PL + I+ RQ A
Sbjct: 270 ILDAATRRNLELTMNLQGGHSNTLATVLDNTTTPMGSRMLQRWIHEPLRDRQRIEARQSA 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERM 87
+ +L+ + +++ +K L D+ER+
Sbjct: 330 LEEILENG-LYDELHPLLKSLGDVERI 355
>gi|344291831|ref|XP_003417633.1| PREDICTED: DNA mismatch repair protein Msh6 [Loxodonta africana]
Length = 1282
Score = 73.6 bits (179), Expect = 2e-11, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1079 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILTHATAHSLVLVDEL 1137
Score = 64.7 bits (156), Expect = 1e-08, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL + I R D
Sbjct: 656 VLDAVTLNNLEIFLNGTNGSTEGTLLERIDTCHTPFGKRLLKQWLCAPLCSPFPINDRLD 715
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 716 AIEDLMVVPDKISEVVDLLKKLPDLERLL 744
>gi|156057209|ref|XP_001594528.1| hypothetical protein SS1G_04335 [Sclerotinia sclerotiorum 1980]
gi|154702121|gb|EDO01860.1| hypothetical protein SS1G_04335 [Sclerotinia sclerotiorum 1980 UF-70]
Length = 1246
Score = 73.6 bits (179), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S TLTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 1018 GCYVPAKSATLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATSRSLVILDEL 1076
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + +N+ D T+GTL LD C T FGKR+ R + PL+++ I +R D
Sbjct: 641 VLDGQTLINLEIFSNTFDGNTDGTLYTLLDRCTTPFGKRLFRQWVSHPLSDIKRINERLD 700
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L +++ ++ L DLER++
Sbjct: 701 AVDLLNKDDNLSRSFKSSTSTLPDLERLI 729
>gi|440636963|gb|ELR06882.1| hypothetical protein GMDG_08173 [Geomyces destructans 20631-21]
Length = 1123
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 34/71 (47%), Positives = 50/71 (70%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + ++ GC VPA+S TLTP+DRI +R+GA DN+ AQST+ EL+E++ I+ A
Sbjct: 896 RMTCIAAIMAQIGCYVPAESATLTPIDRIMSRLGANDNIFAAQSTFFLELSETKKILAEA 955
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 956 TPRSLVILDEL 966
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 33/89 (37%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + N+ D+ GTL + L+ C+T FGKRM R + PL + I +R D
Sbjct: 530 VLDGQTLINLEIFANTYDSGQAGTLFKMLNRCITPFGKRMFRQWVCHPLADAKKINERLD 589
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L + EQ +M + DLER++
Sbjct: 590 AVDMLNADSTLREQFTGQMTRMPDLERLI 618
>gi|73970143|ref|XP_531814.2| PREDICTED: DNA mismatch repair protein Msh6 [Canis lupus familiaris]
Length = 1283
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1080 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILTHATAHSLVLVDEL 1138
Score = 67.8 bits (164), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L+NL + N N +TEGTL+E++D C T FGKR+L+ L PL + AI R D
Sbjct: 656 VLDAVTLSNLEIFMNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCSPYAINDRLD 715
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ + +K L DLER+L
Sbjct: 716 AIEDLMVVPDKISDVADLLKKLPDLERLL 744
>gi|355751303|gb|EHH55558.1| hypothetical protein EGM_04790 [Macaca fascicularis]
Length = 1235
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1058 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILMHATAHSLVLVDEL 1116
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL + AI R D
Sbjct: 635 VLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCSPYAINDRLD 694
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 695 AIEDLMVVPDKISEVVELLKKLPDLERLL 723
>gi|355565681|gb|EHH22110.1| hypothetical protein EGK_05312 [Macaca mulatta]
Length = 1235
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1058 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILMHATAHSLVLVDEL 1116
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL + AI R D
Sbjct: 635 VLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCSPYAINDRLD 694
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 695 AIEDLMVVPDKISEVVELLKKLPDLERLL 723
>gi|332226866|ref|XP_003262610.1| PREDICTED: DNA mismatch repair protein Msh6, partial [Nomascus
leucogenys]
Length = 1290
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1087 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILMHATAHSLVLVDEL 1145
Score = 67.8 bits (164), Expect = 1e-09, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL N AI R D
Sbjct: 664 VLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCNPYAINDRLD 723
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L D+ER+L
Sbjct: 724 AIEDLMVVPDKISEVVELLKKLPDIERLL 752
>gi|388453415|ref|NP_001253005.1| DNA mismatch repair protein Msh6 [Macaca mulatta]
gi|380812114|gb|AFE77932.1| DNA mismatch repair protein Msh6 [Macaca mulatta]
gi|383417799|gb|AFH32113.1| DNA mismatch repair protein Msh6 [Macaca mulatta]
gi|384946650|gb|AFI36930.1| DNA mismatch repair protein Msh6 [Macaca mulatta]
Length = 1360
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1157 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILMHATAHSLVLVDEL 1215
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL + AI R D
Sbjct: 734 VLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCSPYAINDRLD 793
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 794 AIEDLMVVPDKISEVVELLKKLPDLERLL 822
>gi|52842032|ref|YP_095831.1| DNA mismatch repair protein MutS [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|378777667|ref|YP_005186105.1| DNA mismatch repair protein MutS [Legionella pneumophila subsp.
pneumophila ATCC 43290]
gi|52629143|gb|AAU27884.1| DNA mismatch repair protein MutS [Legionella pneumophila subsp.
pneumophila str. Philadelphia 1]
gi|364508482|gb|AEW52006.1| DNA mismatch repair protein MutS [Legionella pneumophila subsp.
pneumophila ATCC 43290]
Length = 865
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD +TL P+DRIFTR+GA D+LS +ST++ E+TE+ I+R A+ SL
Sbjct: 646 VLLAHIGSFVPADKVTLGPLDRIFTRIGASDDLSSGRSTFMVEMTETAQILRQATSQSLV 705
Query: 152 LVDEL 156
L+DE+
Sbjct: 706 LIDEI 710
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD++ +L + N E L+ LD + G R+L+ L KPL I+ RQ AI
Sbjct: 282 LDASTQKHLELFENIHGGGEHCLLSILDKTACAMGSRLLKRWLGKPLKQHAIIQTRQQAI 341
Query: 62 S--VLLDQKHITEQMRAKMKDLRDLERML 88
+ L Q Q+ +K D+ER++
Sbjct: 342 KEIIFLQQDVSLHQL---IKQCADVERIV 367
>gi|402890844|ref|XP_003908683.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 1 [Papio anubis]
Length = 1360
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1157 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILMHATAHSLVLVDEL 1215
Score = 66.6 bits (161), Expect = 3e-09, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL + AI R D
Sbjct: 734 VLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCSPYAINDRLD 793
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 794 AIEDLMVVPDKISEVVELLKKLPDLERLL 822
>gi|427399219|ref|ZP_18890457.1| DNA mismatch repair protein mutS [Massilia timonae CCUG 45783]
gi|425721710|gb|EKU84618.1| DNA mismatch repair protein mutS [Massilia timonae CCUG 45783]
Length = 890
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA S T+ P+DRIFTR+GA D+L+ +ST++ E+TES I+ A+++SL
Sbjct: 656 TLLAYVGSYVPATSATIGPIDRIFTRIGASDDLANGRSTFMVEMTESAAILNGATEHSLV 715
Query: 152 LVDEL 156
L+DE+
Sbjct: 716 LMDEV 720
>gi|397504284|ref|XP_003822731.1| PREDICTED: DNA mismatch repair protein Msh6 [Pan paniscus]
Length = 1299
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1096 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILMHATAHSLVLVDEL 1154
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL N AI R D
Sbjct: 673 VLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCNPYAINDRLD 732
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 733 AIEDLMVVPDKISEVVELLKKLPDLERLL 761
>gi|148359351|ref|YP_001250558.1| DNA mismatch repair protein MutS [Legionella pneumophila str.
Corby]
gi|148281124|gb|ABQ55212.1| DNA mismatch repair protein MutS [Legionella pneumophila str.
Corby]
gi|307610506|emb|CBX00089.1| DNA mismatch repair protein MutS [Legionella pneumophila 130b]
Length = 839
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD +TL P+DRIFTR+GA D+LS +ST++ E+TE+ I+R A+ SL
Sbjct: 620 VLLAHIGSFVPADKVTLGPLDRIFTRIGASDDLSSGRSTFMVEMTETAQILRQATSQSLV 679
Query: 152 LVDEL 156
L+DE+
Sbjct: 680 LIDEI 684
Score = 36.6 bits (83), Expect = 3.2, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD++ +L + N E L+ LD + G R+L+ L KPL I+ RQ AI
Sbjct: 256 LDASTQKHLELFENIHGGGEHCLLSILDKTACAMGSRLLKRWLGKPLKQHAIIQTRQQAI 315
Query: 62 S--VLLDQKHITEQMRAKMKDLRDLERML 88
+ L Q Q+ +K D+ER++
Sbjct: 316 KEIIFLQQDVSLHQL---IKQCADVERIV 341
>gi|397667533|ref|YP_006509070.1| methyl-directed mismatch repair protein [Legionella pneumophila
subsp. pneumophila]
gi|115299209|sp|Q5ZUJ3.2|MUTS_LEGPH RecName: Full=DNA mismatch repair protein MutS
gi|189083211|sp|A5ICW2.2|MUTS_LEGPC RecName: Full=DNA mismatch repair protein MutS
gi|395130944|emb|CCD09193.1| methyl-directed mismatch repair protein [Legionella pneumophila
subsp. pneumophila]
Length = 846
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD +TL P+DRIFTR+GA D+LS +ST++ E+TE+ I+R A+ SL
Sbjct: 627 VLLAHIGSFVPADKVTLGPLDRIFTRIGASDDLSSGRSTFMVEMTETAQILRQATSQSLV 686
Query: 152 LVDEL 156
L+DE+
Sbjct: 687 LIDEI 691
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD++ +L + N E L+ LD + G R+L+ L KPL I+ RQ AI
Sbjct: 263 LDASTQKHLELFENIHGGGEHCLLSILDKTACAMGSRLLKRWLGKPLKQHAIIQTRQQAI 322
Query: 62 S--VLLDQKHITEQMRAKMKDLRDLERML 88
+ L Q Q+ +K D+ER++
Sbjct: 323 KEIIFLQQDVSLHQL---IKQCADVERIV 348
>gi|2696086|dbj|BAA23674.1| GTBP-N [Homo sapiens]
Length = 1360
Score = 73.6 bits (179), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1157 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILMHATAHSLVLVDEL 1215
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL N AI R D
Sbjct: 734 VLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCNHYAINDRLD 793
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 794 AIEDLMVVPDKISEVVELLKKLPDLERLL 822
>gi|410954737|ref|XP_003984018.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 2 [Felis catus]
Length = 1228
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC +PA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1025 GCYIPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILTHATAHSLVLVDEL 1083
Score = 67.8 bits (164), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L+NL + N N +TEGTL+E++D C T FGKR+L+ L PL + AI R D
Sbjct: 601 VLDAVTLSNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCSPYAINDRLD 660
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ + +K + DLER+L
Sbjct: 661 AIEDLMAVPDKISDVADLLKKIPDLERLL 689
>gi|307546337|ref|YP_003898816.1| DNA mismatch repair protein MutS [Halomonas elongata DSM 2581]
gi|307218361|emb|CBV43631.1| DNA mismatch repair protein [Halomonas elongata DSM 2581]
Length = 861
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 50/65 (76%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L+ G VPAD+ ++ PVDRIFTR+G+ D+L+G +ST++ E+TE+ I+ +A+ +SL
Sbjct: 632 TLLAHTGSFVPADAASIGPVDRIFTRIGSSDDLAGGRSTFMVEMTETANILHNATDHSLV 691
Query: 152 LVDEL 156
L+DE+
Sbjct: 692 LMDEI 696
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 46/88 (52%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D+ + NL + N T+ TL LD T+ G R+L+ L +PL + + RQ A
Sbjct: 266 VIDAASRRNLEIGVNLGGGTDNTLASVLDTTSTAMGSRLLKRWLNRPLRDRAQVSGRQAA 325
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
++ LLD R +K + D+ER+L
Sbjct: 326 VAALLDGDGFVAP-REALKAIGDVERIL 352
>gi|296107398|ref|YP_003619098.1| DNA mismatch repair protein MutS [Legionella pneumophila 2300/99
Alcoy]
gi|295649299|gb|ADG25146.1| DNA mismatch repair protein MutS [Legionella pneumophila 2300/99
Alcoy]
Length = 839
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD +TL P+DRIFTR+GA D+LS +ST++ E+TE+ I+R A+ SL
Sbjct: 620 VLLAHIGSFVPADKVTLGPLDRIFTRIGASDDLSSGRSTFMVEMTETAQILRQATSQSLV 679
Query: 152 LVDEL 156
L+DE+
Sbjct: 680 LIDEI 684
>gi|358381647|gb|EHK19322.1| hypothetical protein TRIVIDRAFT_81241 [Trichoderma virens Gv29-8]
Length = 1208
Score = 73.6 bits (179), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + N+ N ++GTL L+ C+T FGKR+ R + PL N+D I +R D
Sbjct: 619 VLDGQTLTNLELFANTVNGNSDGTLFGLLNKCITPFGKRLFRQWVAHPLCNIDRINERLD 678
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L D + EQ +++ + DLER++
Sbjct: 679 AVELLNDDPSVREQFASQLVKMPDLERLI 707
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 995 GCFVPAKSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1053
>gi|344245100|gb|EGW01204.1| DNA mismatch repair protein Msh6 [Cricetulus griseus]
Length = 1260
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LT VDR+FTR+GA D + +ST+ EL+E+ +I+RHA+ +SL LVDEL
Sbjct: 1057 GCYVPAEECRLTLVDRVFTRLGASDRIMSGESTFFVELSETASILRHATAHSLVLVDEL 1115
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E+LD C T FGKR+L+ L PL + AI R D
Sbjct: 633 VLDAVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLKQWLCAPLCSPSAISDRLD 692
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L+ ++ +K L DLER+L
Sbjct: 693 AVGDLMALPDKVNEVTDLLKKLPDLERLL 721
>gi|209876662|ref|XP_002139773.1| MutS domain-containing III family protein [Cryptosporidium muris
RN66]
gi|209555379|gb|EEA05424.1| MutS domain-containing III family protein [Cryptosporidium muris
RN66]
Length = 1210
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 46/59 (77%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA +LT VDRIFTR+GA D++ A+ST+L EL E+ TI++HA++ SL +VDEL
Sbjct: 996 GCFVPASKCSLTLVDRIFTRIGAYDSILEAKSTFLVELEETATILKHATRNSLVVVDEL 1054
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/129 (29%), Positives = 58/129 (44%), Gaps = 18/129 (13%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ AL +L +L + +L L H T G R+LR L PLTN D I +R D
Sbjct: 572 LLDAGALKDLELLQTQQGDEKNSLFGFLKHTSTPGGTRLLRKWLSHPLTNADRINERLDC 631
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRM-- 118
+ ++ ++ R+L+ + P+ G P +L L +RI R+
Sbjct: 632 VEWFINHPNVLFNF------CRELKAISPN-------GNGSPGSNLDL---ERIINRITT 675
Query: 119 GAKDNLSGA 127
GA N GA
Sbjct: 676 GALQNTRGA 684
>gi|1840467|gb|AAB47425.1| bacterial MutS homolog [Homo sapiens]
Length = 1360
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1157 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILMHATAHSLVLVDEL 1215
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL N AI R D
Sbjct: 734 VLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCNHYAINDRLD 793
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 794 AIEDLMVVPDKISEVVELLKKLPDLERLL 822
>gi|354474750|ref|XP_003499593.1| PREDICTED: DNA mismatch repair protein Msh6 [Cricetulus griseus]
Length = 1297
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LT VDR+FTR+GA D + +ST+ EL+E+ +I+RHA+ +SL LVDEL
Sbjct: 1094 GCYVPAEECRLTLVDRVFTRLGASDRIMSGESTFFVELSETASILRHATAHSLVLVDEL 1152
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E+LD C T FGKR+L+ L PL + AI R D
Sbjct: 670 VLDAVTLNNLEIFLNGTNGSTEGTLLERLDTCHTPFGKRLLKQWLCAPLCSPSAISDRLD 729
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L+ ++ +K L DLER+L
Sbjct: 730 AVGDLMALPDKVNEVTDLLKKLPDLERLL 758
>gi|388456103|ref|ZP_10138398.1| DNA mismatch repair protein MutS [Fluoribacter dumoffii Tex-KL]
Length = 848
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPA S+TL P+DRIFTR+GA D+L+ +ST++ E+TE+ I+R A+ SL
Sbjct: 628 VLLAHMGSFVPAKSVTLGPIDRIFTRIGASDDLASGRSTFMVEMTETAQILRQATNESLV 687
Query: 152 LVDEL 156
L+DE+
Sbjct: 688 LIDEI 692
Score = 43.9 bits (102), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 3/87 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD++ +L + N E +L+ LD +S G R+LR L +PL + IK RQ+AI
Sbjct: 264 LDASTQKHLELFENMSGGHENSLLSLLDKTASSMGSRLLRRWLGRPLKQHNQIKSRQNAI 323
Query: 62 SVLLD-QKHITEQMRAKMKDLRDLERM 87
++ Q+ +T + ++ + D+ER+
Sbjct: 324 KEIMHLQQGVT--LYELLRQVCDVERI 348
>gi|2104549|gb|AAB57798.1| AGAA.3 [Arabidopsis thaliana]
Length = 1362
Score = 73.2 bits (178), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 57/90 (63%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTNSDNTT-EGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ AL NL + NS N GTL QL+ C+T+ GKR+L+ L +PL N + IK+RQD
Sbjct: 710 VLDAAALENLEIFENSRNGGYSGTLYAQLNQCITASGKRLLKTWLARPLYNTELIKERQD 769
Query: 60 AISVLLDQK-HITEQMRAKMKDLRDLERML 88
A+++L + + + R + L D+ER++
Sbjct: 770 AVAILRGENLPYSLEFRKSLSRLPDMERLI 799
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 27/59 (45%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA++ ++PVD+I RMGAKD++ QST+L EL+E+ ++ A++ SL ++DEL
Sbjct: 1144 GADVPAETFEVSPVDKICVRMGAKDHIMAGQSTFLTELSETAVMLTSATRNSLVVLDEL 1202
>gi|410217568|gb|JAA06003.1| mutS homolog 6 [Pan troglodytes]
gi|410261614|gb|JAA18773.1| mutS homolog 6 [Pan troglodytes]
gi|410295678|gb|JAA26439.1| mutS homolog 6 [Pan troglodytes]
Length = 1360
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1157 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILMHATAHSLVLVDEL 1215
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL N AI R D
Sbjct: 734 VLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCNPYAINDRLD 793
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 794 AIEDLMVVPDKISEVVELLKKLPDLERLL 822
>gi|410954735|ref|XP_003984017.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 1 [Felis catus]
Length = 1359
Score = 73.2 bits (178), Expect = 3e-11, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC +PA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1156 GCYIPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILTHATAHSLVLVDEL 1214
Score = 67.0 bits (162), Expect = 2e-09, Method: Composition-based stats.
Identities = 37/89 (41%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L+NL + N N +TEGTL+E++D C T FGKR+L+ L PL + AI R D
Sbjct: 732 VLDAVTLSNLEIFLNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCSPYAINDRLD 791
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ + +K + DLER+L
Sbjct: 792 AIEDLMAVPDKISDVADLLKKIPDLERLL 820
>gi|338997258|ref|ZP_08635959.1| DNA mismatch repair protein MutS [Halomonas sp. TD01]
gi|338765855|gb|EGP20786.1| DNA mismatch repair protein MutS [Halomonas sp. TD01]
Length = 855
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPADS + PVDRIFTR+G+ D+L+G +ST++ E+TE+ I+ +A+++SL
Sbjct: 632 ALLAHSGSFVPADSAEIGPVDRIFTRIGSSDDLAGGRSTFMVEMTETANILHNATEHSLV 691
Query: 152 LVDEL 156
L+DE+
Sbjct: 692 LMDEI 696
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/89 (28%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D+ + NL + N +++ TL LD C T+ G R+L+ L +PL D ++ R
Sbjct: 266 VIDAASRRNLEIDINLGGSSDNTLASVLDTCTTAMGSRLLKRWLNRPLRQRDVVEDRHAG 325
Query: 61 ISVL-LDQKHITEQMRAKMKDLRDLERML 88
+++L ++ ++ +R + D+ D+ER+L
Sbjct: 326 VALLSIEAAYLP--LRDTLSDVGDVERIL 352
>gi|149921078|ref|ZP_01909537.1| DNA mismatch repair protein [Plesiocystis pacifica SIR-1]
gi|149818082|gb|EDM77539.1| DNA mismatch repair protein [Plesiocystis pacifica SIR-1]
Length = 930
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 57/88 (64%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVL-TNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD T+L NL V T D G+L+ +DH TS G RMLRA L PL ++ AI+ RQD
Sbjct: 306 VLDETSLRNLEVFRTLRDAKRRGSLLWAIDHTRTSMGARMLRAWLGAPLLDIAAIRARQD 365
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERM 87
+ VL+ + + ++++++KD+RD+ R+
Sbjct: 366 GVEVLIAEARLRAELQSRLKDVRDVVRL 393
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 41/65 (63%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPA + + +DR+FTR+GA D+L +ST++ E+ E+ I+ AS SL
Sbjct: 686 AILAHVGSFVPAAAARVGLIDRVFTRVGAADDLGRGESTFMVEMRETAQIVAQASPRSLV 745
Query: 152 LVDEL 156
L+DE+
Sbjct: 746 LLDEI 750
>gi|152979852|ref|YP_001352979.1| DNA mismatch repair protein MutS [Janthinobacterium sp. Marseille]
gi|189083179|sp|A6SXI2.1|MUTS_JANMA RecName: Full=DNA mismatch repair protein MutS
gi|151279929|gb|ABR88339.1| DNA mismatch repair protein [Janthinobacterium sp. Marseille]
Length = 882
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA S + P+DRIFTR+GA D+L+G +ST++ E+TES I+ A++ SL
Sbjct: 652 TLLAYVGSFVPASSAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTESAAILNGATENSLV 711
Query: 152 LVDEL 156
L+DE+
Sbjct: 712 LMDEV 716
>gi|340713019|ref|XP_003395049.1| PREDICTED: probable DNA mismatch repair protein Msh6-like [Bombus
terrestris]
Length = 1130
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA S LT VDRIFTR+GA D++ QST+L EL+E+ I++HA+ YSL L+DEL
Sbjct: 936 GSYVPASSCCLTLVDRIFTRLGANDDILAGQSTFLVELSETSAILQHATPYSLVLLDEL 994
Score = 65.5 bits (158), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ + NL + EG+L++ LD C T+FGKR+LR + +P + I +RQ A
Sbjct: 541 VLDAITINNLRIFG------EGSLMKTLDRCCTAFGKRLLREWICRPSCRKNVIIERQQA 594
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L+D + + R+ + L DLER+L
Sbjct: 595 IQELMDNTEVMQNARSILAGLPDLERLL 622
>gi|367031666|ref|XP_003665116.1| hypothetical protein MYCTH_2308482 [Myceliophthora thermophila ATCC
42464]
gi|347012387|gb|AEO59871.1| hypothetical protein MYCTH_2308482 [Myceliophthora thermophila ATCC
42464]
Length = 1210
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD +L NL + N+ N EGTL L+ C+T FGKR+LR + PL +++ I +R D
Sbjct: 619 ILDGQSLINLEIFANTVNGGPEGTLFNLLNRCITPFGKRLLRQWVCHPLCSIEKINERLD 678
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L + I +Q ++M + DLER++
Sbjct: 679 AVDMLNADRSILQQFSSQMAKMPDLERLI 707
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S LTP+DRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 995 GCYVPASSARLTPIDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1053
>gi|310796497|gb|EFQ31958.1| MutS domain V [Glomerella graminicola M1.001]
Length = 1229
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L NL V +N+ N EGTL L+ CVT FGKR+ R + PL ++ I +R D
Sbjct: 640 ILDGQTLINLEVFSNTVNGGPEGTLFTLLNRCVTPFGKRLFRQWVCHPLCDIKKINERLD 699
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L + + EQ ++M + DLER++
Sbjct: 700 AVDMLNSDRGVREQFTSQMTKMPDLERLI 728
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S LTPVDRI +R+GA DN+ +QST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 1016 GCYVPATSALLTPVDRIMSRLGANDNIFASQSTFFVELSETKKILSEATPRSLVILDEL 1074
>gi|301753267|ref|XP_002912469.1| PREDICTED: DNA mismatch repair protein Msh6-like [Ailuropoda
melanoleuca]
gi|281352643|gb|EFB28227.1| hypothetical protein PANDA_000220 [Ailuropoda melanoleuca]
Length = 1362
Score = 73.2 bits (178), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC +PA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1159 GCYIPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILTHATAHSLVLVDEL 1217
Score = 67.4 bits (163), Expect = 2e-09, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L+NL + N N +TEGTL+E++D C T FGKR+L+ L PL + AI R D
Sbjct: 735 VLDAVTLSNLEIFMNGTNGSTEGTLLEKIDTCHTPFGKRLLKQWLCAPLCSPYAINDRLD 794
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ + +K L DLER+L
Sbjct: 795 AIEDLMVVPDKISDVVDLLKKLPDLERLL 823
>gi|258578083|ref|XP_002543223.1| DNA mismatch repair protein msh6 [Uncinocarpus reesii 1704]
gi|237903489|gb|EEP77890.1| DNA mismatch repair protein msh6 [Uncinocarpus reesii 1704]
Length = 1200
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM ++ ++ GC VP S LTPVDRI +R+GA DN+ GAQST+ EL+E++ I+ A
Sbjct: 970 RMTCTAVIMAQIGCYVPCASARLTPVDRIMSRLGANDNIFGAQSTFFVELSETKKILSEA 1029
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1030 TSRSLVILDEL 1040
Score = 63.2 bits (152), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + NS D GTL + L+ C+T FGKR+ + + PL + I R D
Sbjct: 606 VLDGQTLINLEIFANSFDGGQHGTLFQLLNRCITPFGKRLFKQWVCHPLMDSRQINARLD 665
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L I +Q +++ + DLER++
Sbjct: 666 AVEALNADSSIRDQFSSQLTKMPDLERLI 694
>gi|359499642|gb|AEV53217.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
Length = 217
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VP+D+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPSDAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|356572787|ref|XP_003554547.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Glycine max]
Length = 1269
Score = 73.2 bits (178), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 59/90 (65%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ AL NL + NS N + GTL QL+ CVT+FGKR+L+ L +PL +++++K+RQ+
Sbjct: 635 VLDAAALENLEIFENSRNGDSSGTLYAQLNQCVTAFGKRLLKTWLARPLCHVESVKERQE 694
Query: 60 AISVLLDQKHITE-QMRAKMKDLRDLERML 88
A++ L + + R + L D+ER+L
Sbjct: 695 AVAGLKGVNLPSALEFRKALYKLPDMERLL 724
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA+S L+PVDRIF RMGAKDN+ QST+L EL+E+ +++ A+ SL +DEL
Sbjct: 1045 GADVPAESFDLSPVDRIFVRMGAKDNIMAGQSTFLTELSETASMLSSATCNSLVALDEL 1103
>gi|389711215|ref|ZP_10187026.1| DNA mismatch repair protein MutS [Acinetobacter sp. HA]
gi|388610067|gb|EIM39204.1| DNA mismatch repair protein MutS [Acinetobacter sp. HA]
Length = 877
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA ++TL P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL L
Sbjct: 645 LLAYCGSYVPAQAVTLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATSQSLVL 704
Query: 153 VDEL 156
+DE+
Sbjct: 705 MDEV 708
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 40/66 (60%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++PL + + +R DA VLLD H +R +K++
Sbjct: 297 SLFQLINDCQTAMGGRLLSRTLMQPLRDTAILDERLDATQVLLDGFH-ESPIRLVLKEIS 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|395508080|ref|XP_003758343.1| PREDICTED: DNA mismatch repair protein Msh6 [Sarcophilus harrisii]
Length = 1424
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 29/59 (49%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ + TPVDR+FTR+GA D + +ST+ E+ E+ +I++HA+++SL L+DEL
Sbjct: 1221 GCYVPAEVCSFTPVDRVFTRLGASDRIMSGESTFFVEMNETASILQHATEHSLVLMDEL 1279
Score = 72.4 bits (176), Expect = 7e-11, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 56/89 (62%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L+NL +L N+ N +TEGTL+E++D C T FGKR+L+ L PL N +I R D
Sbjct: 795 VLDAVTLSNLEILQNAVNGSTEGTLLERIDSCCTPFGKRLLKQWLCAPLCNPSSINDRLD 854
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L+ ++ +K L DLER+L
Sbjct: 855 AMEDLMAVPDKISEVVDLLKKLPDLERLL 883
>gi|355704543|gb|AES02262.1| mutS-like protein 6 [Mustela putorius furo]
Length = 1278
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 30/59 (50%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC +PA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1076 GCYIPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILTHATAHSLVLVDEL 1134
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 38/89 (42%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L+NL + N N +TEGTL+E++D C T FGKR+L+ L PL + AI R D
Sbjct: 653 VLDAVTLSNLEIFMNGTNGSTEGTLLEKIDSCHTPFGKRLLKQWLCAPLCSPYAINDRLD 712
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ + + +K L DLER+L
Sbjct: 713 AIEDLMAEPDKISDVVDLLKKLPDLERLL 741
>gi|320035900|gb|EFW17840.1| DNA mismatch repair protein msh6 [Coccidioides posadasii str.
Silveira]
Length = 1204
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM ++ ++ GC VP S LTPVDRI +R+GA DN+ GAQST+ EL+E++ I+ A
Sbjct: 975 RMTCTAVIMAQIGCYVPCASARLTPVDRIMSRLGANDNIFGAQSTFFVELSETKKILSEA 1034
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1035 TSRSLVILDEL 1045
Score = 66.2 bits (160), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL V NS D +GTL + L+ C+T FGKRM + + PL + I R D
Sbjct: 610 VLDGQTLINLEVFANSYDGGQDGTLFQLLNRCITPFGKRMFKQWVCHPLMDSKKINARLD 669
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L I +Q +++ + DLER++
Sbjct: 670 AVDALNADSSIRDQFSSQLTKMPDLERLI 698
>gi|303321249|ref|XP_003070619.1| MutS domain III family protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240110315|gb|EER28474.1| MutS domain III family protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 1221
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM ++ ++ GC VP S LTPVDRI +R+GA DN+ GAQST+ EL+E++ I+ A
Sbjct: 992 RMTCTAAIMAQIGCYVPCASARLTPVDRIMSRLGANDNIFGAQSTFFVELSETKKILSEA 1051
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1052 TSRSLVILDEL 1062
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL V NS D +GTL + L+ C+T FGKRM + + PL + I R D
Sbjct: 627 VLDGQTLINLEVFANSYDGGQDGTLFQLLNRCITPFGKRMFKQWVCHPLMDSKKINARLD 686
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L I +Q +++ + DLER++
Sbjct: 687 AVDALNADSSIRDQFSSQLTKMPDLERLI 715
>gi|392866476|gb|EAS27907.2| DNA mismatch repair protein msh6 [Coccidioides immitis RS]
Length = 1221
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM ++ ++ GC VP S LTPVDRI +R+GA DN+ GAQST+ EL+E++ I+ A
Sbjct: 992 RMTCTAVIMAQIGCYVPCASARLTPVDRIMSRLGANDNIFGAQSTFFVELSETKKILSEA 1051
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1052 TSRSLVILDEL 1062
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL V NS D +GTL + L+ C+T FGKRM + + PL + I R D
Sbjct: 627 VLDGQTLINLEVFANSYDGGQDGTLFQLLNRCITPFGKRMFKQWVCHPLMDSKKINARLD 686
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L I +Q +++ + DLER++
Sbjct: 687 AVDALNADSSIRDQFSSQLTKMPDLERLI 715
>gi|359499684|gb|AEV53238.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
insidiosa]
Length = 217
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPA++ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPAEAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATANSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|91775187|ref|YP_544943.1| DNA mismatch repair protein MutS [Methylobacillus flagellatus KT]
gi|91775331|ref|YP_545087.1| DNA mismatch repair protein MutS [Methylobacillus flagellatus KT]
gi|123452014|sp|Q1H2P1.1|MUTS_METFK RecName: Full=DNA mismatch repair protein MutS
gi|91709174|gb|ABE49102.1| DNA mismatch repair protein MutS [Methylobacillus flagellatus KT]
gi|91709318|gb|ABE49246.1| DNA mismatch repair protein MutS [Methylobacillus flagellatus KT]
gi|167042436|gb|ABZ07162.1| putative MutS domain V [uncultured marine microorganism
HF4000_ANIW133B20]
Length = 884
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPA S + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ +A++ SL
Sbjct: 660 VLLAHCGCFVPAKSARIGPIDRIFTRIGASDDLAGGRSTFMVEMTETANILHNATERSLV 719
Query: 152 LVDEL 156
L+DE+
Sbjct: 720 LLDEI 724
Score = 39.3 bits (90), Expect = 0.59, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + + TL L+ VT+ G R+LR+ L PL + I+ R A+
Sbjct: 299 LDAATRRNLEIDQTLRGESSPTLYSLLNTTVTAMGARLLRSWLHHPLQHQADIQARLQAV 358
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
VL Q + +R ++++ D+ERM
Sbjct: 359 KVLQAQ---YDGLRPLLRNVGDIERM 381
>gi|221484273|gb|EEE22569.1| DNA mismatch repair protein, putative [Toxoplasma gondii GT1]
Length = 1676
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 46/59 (77%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPADS TL+PVDRIFTR+GA+D++ ST+L EL + +M + +++SLA++DEL
Sbjct: 1435 GCFVPADSCTLSPVDRIFTRLGAEDSILQGASTFLVELKDISELMTYGTRHSLAVIDEL 1493
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ AL L +L D + L+ LD VT+FG R+LR LV PL N+ + +R DA
Sbjct: 951 VLDAHALRQLEILQTQDGCAKQALLGYLDRTVTAFGHRLLRRWLVAPLRNVAELTRRLDA 1010
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCR 100
+ L + +R ++ D+ER+ QG R
Sbjct: 1011 VDWLCNSPESVADIRKALQACPDIERLSAKICAQGLQGER 1050
>gi|350551919|ref|ZP_08921129.1| DNA mismatch repair protein mutS [Thiorhodospira sibirica ATCC
700588]
gi|349795849|gb|EGZ49642.1| DNA mismatch repair protein mutS [Thiorhodospira sibirica ATCC
700588]
Length = 856
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ HAS++SL L+DE+
Sbjct: 635 GAFVPAKRAVIGPIDRIFTRIGASDDLAGGRSTFMVEMTEAANILHHASEHSLVLMDEI 693
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N E TL+ LDH T+ G R+L + +P+ +K R A
Sbjct: 264 ILDAATRRNLELSRNLSGGREHTLLAVLDHSATAMGSRLLARWIHQPIRAHAILKARHSA 323
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ LLD I+ + + + DLER+L
Sbjct: 324 VQTLLDLD-ISADLYDSLHQVGDLERIL 350
>gi|119180370|ref|XP_001241662.1| hypothetical protein CIMG_08825 [Coccidioides immitis RS]
Length = 1127
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM ++ ++ GC VP S LTPVDRI +R+GA DN+ GAQST+ EL+E++ I+ A
Sbjct: 898 RMTCTAVIMAQIGCYVPCASARLTPVDRIMSRLGANDNIFGAQSTFFVELSETKKILSEA 957
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 958 TSRSLVILDEL 968
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL V NS D +GTL + L+ C+T FGKRM + + PL + I R D
Sbjct: 627 VLDGQTLINLEVFANSYDGGQDGTLFQLLNRCITPFGKRMFKQWVCHPLMDSKKINARLD 686
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L I +Q +++ + DLER++
Sbjct: 687 AVDALNADSSIRDQFSSQLTKMPDLERLI 715
>gi|410349455|gb|JAA41331.1| mutS homolog 6 [Pan troglodytes]
Length = 1360
Score = 72.8 bits (177), Expect = 4e-11, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ LTP+DR+FTR+GA D + +ST+ EL+E+ +I+ HA+ +SL LVDEL
Sbjct: 1157 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGESTFFVELSETASILVHATAHSLVLVDEL 1215
Score = 68.6 bits (166), Expect = 8e-10, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL N AI R D
Sbjct: 734 VLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCNPYAINDRLD 793
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 794 AIEDLMVVPDKISEVVELLKKLPDLERLL 822
>gi|294856343|gb|ADF45109.1| methyl-directed mismatch repair protein [Escherichia sp. B1147]
gi|294856365|gb|ADF45120.1| methyl-directed mismatch repair protein [Escherichia sp. TW09308]
gi|294856367|gb|ADF45121.1| methyl-directed mismatch repair protein [Escherichia sp. B1225]
gi|294856369|gb|ADF45122.1| methyl-directed mismatch repair protein [Escherichia sp. B646]
gi|294856371|gb|ADF45123.1| methyl-directed mismatch repair protein [Escherichia sp. E1118]
gi|294856373|gb|ADF45124.1| methyl-directed mismatch repair protein [Escherichia sp. E1195]
gi|294856375|gb|ADF45125.1| methyl-directed mismatch repair protein [Escherichia sp. E1196]
gi|294856377|gb|ADF45126.1| methyl-directed mismatch repair protein [Escherichia sp. E471]
gi|294856379|gb|ADF45127.1| methyl-directed mismatch repair protein [Escherichia sp. E472]
gi|294856381|gb|ADF45128.1| methyl-directed mismatch repair protein [Escherichia sp. E620]
gi|294856383|gb|ADF45129.1| methyl-directed mismatch repair protein [Escherichia sp. M1108]
gi|294856385|gb|ADF45130.1| methyl-directed mismatch repair protein [Escherichia sp. TA290]
gi|294856387|gb|ADF45131.1| methyl-directed mismatch repair protein [Escherichia sp. TW14263]
gi|294856389|gb|ADF45132.1| methyl-directed mismatch repair protein [Escherichia sp. TW14264]
gi|294856391|gb|ADF45133.1| methyl-directed mismatch repair protein [Escherichia sp. TW14265]
gi|294856393|gb|ADF45134.1| methyl-directed mismatch repair protein [Escherichia sp. TW14266]
gi|294856395|gb|ADF45135.1| methyl-directed mismatch repair protein [Escherichia sp. TW14267]
gi|294856397|gb|ADF45136.1| methyl-directed mismatch repair protein [Escherichia sp. RL325/96]
gi|294856399|gb|ADF45137.1| methyl-directed mismatch repair protein [Escherichia sp. Z205]
Length = 169
Score = 72.8 bits (177), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 49/64 (76%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA S+ + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 55 LMAYIGSYVPAQSVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 114
Query: 153 VDEL 156
+DE+
Sbjct: 115 MDEI 118
>gi|161871024|ref|YP_001600204.1| DNA mismatch repair protein MutS [Neisseria meningitidis 053442]
gi|189083161|sp|A9M4L8.1|MUTS_NEIM0 RecName: Full=DNA mismatch repair protein MutS
gi|161596577|gb|ABX74237.1| DNA mismatch repair protein [Neisseria meningitidis 053442]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|387813627|ref|YP_005429109.1| methyl-directed mismatch repair protein [Marinobacter
hydrocarbonoclasticus ATCC 49840]
gi|381338639|emb|CCG94686.1| methyl-directed mismatch repair protein [Marinobacter
hydrocarbonoclasticus ATCC 49840]
Length = 874
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 49/64 (76%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA+ L PVDRIFTRMG+ D+++G +ST++ E+TE+ I+ +A+++SL L
Sbjct: 631 LLAYTGSFVPANRAVLGPVDRIFTRMGSSDDIAGGRSTFMVEMTETANILHNATEHSLVL 690
Query: 153 VDEL 156
+DE+
Sbjct: 691 MDEV 694
Score = 56.6 bits (135), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ + NL + TN + TL +D T+ G R LR L +PL +++ ++QRQ A
Sbjct: 265 ILDAASRRNLEIDTNLMGGQQHTLAWVMDRTATAMGARELRRWLNRPLRDVERVRQRQQA 324
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+S LLD H E + +K + D+ER+L
Sbjct: 325 VSALLDGFHY-EPVHDLLKRVGDIERIL 351
>gi|221505747|gb|EEE31392.1| DNA mismatch repair protein, putative [Toxoplasma gondii VEG]
Length = 1682
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 46/59 (77%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPADS TL+PVDRIFTR+GA+D++ ST+L EL + +M + +++SLA++DEL
Sbjct: 1441 GCFVPADSCTLSPVDRIFTRLGAEDSILQGASTFLVELKDISELMTYGTRHSLAVIDEL 1499
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ AL L +L D + L+ LD VT+FG R+LR LV PL N+ + +R DA
Sbjct: 957 VLDAHALRQLEILQTQDGCAKQALLGYLDRTVTAFGHRLLRRWLVAPLRNVAELTRRLDA 1016
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCR 100
+ L + +R ++ D+ER+ QG R
Sbjct: 1017 VDWLCNSPESVADIRKALQACPDIERLSAKICAQGLQGER 1056
>gi|120555003|ref|YP_959354.1| DNA mismatch repair protein MutS [Marinobacter aquaeolei VT8]
gi|166232124|sp|A1U2E8.1|MUTS_MARAV RecName: Full=DNA mismatch repair protein MutS
gi|120324852|gb|ABM19167.1| DNA mismatch repair protein MutS [Marinobacter aquaeolei VT8]
Length = 874
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 49/64 (76%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA+ L PVDRIFTRMG+ D+++G +ST++ E+TE+ I+ +A+++SL L
Sbjct: 631 LLAYTGSFVPANRAVLGPVDRIFTRMGSSDDIAGGRSTFMVEMTETANILHNATEHSLVL 690
Query: 153 VDEL 156
+DE+
Sbjct: 691 MDEV 694
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ + NL + TN + TL +D T+ G R LR L +PL +++ ++QRQ A
Sbjct: 265 ILDAASRRNLEIDTNLMGGQQHTLAWVMDRTATAMGARELRRWLNRPLRDVERVRQRQQA 324
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+S LLD H E + +K + D+ER+L
Sbjct: 325 VSALLDGFHY-EPVHDLLKRVGDIERIL 351
>gi|296840684|ref|ZP_06863202.2| DNA mismatch repair protein MutS [Neisseria polysaccharea ATCC
43768]
gi|296840233|gb|EFH24171.1| DNA mismatch repair protein MutS [Neisseria polysaccharea ATCC
43768]
Length = 856
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 616 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 675
Query: 152 LVDEL 156
L+DE+
Sbjct: 676 LMDEV 680
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 257 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 316
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q E ++ ++K++ D+ER+
Sbjct: 317 AALESQ---YEPLQCRLKNIADIERI 339
>gi|433514994|ref|ZP_20471768.1| DNA mismatch repair protein MutS [Neisseria meningitidis 2004090]
gi|432255196|gb|ELL10526.1| DNA mismatch repair protein MutS [Neisseria meningitidis 2004090]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|433470300|ref|ZP_20427705.1| DNA mismatch repair protein MutS [Neisseria meningitidis 98080]
gi|432200834|gb|ELK56923.1| DNA mismatch repair protein MutS [Neisseria meningitidis 98080]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|421555929|ref|ZP_16001853.1| DNA mismatch repair protein MutS [Neisseria meningitidis 98008]
gi|402328485|gb|EJU63855.1| DNA mismatch repair protein MutS [Neisseria meningitidis 98008]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|218767269|ref|YP_002341781.1| DNA mismatch repair protein MutS [Neisseria meningitidis Z2491]
gi|385339061|ref|YP_005892934.1| DNA mismatch repair protein MutS [Neisseria meningitidis WUE 2594]
gi|433476599|ref|ZP_20433930.1| DNA mismatch repair protein MutS [Neisseria meningitidis 88050]
gi|433518319|ref|ZP_20475058.1| DNA mismatch repair protein MutS [Neisseria meningitidis 96023]
gi|433518780|ref|ZP_20475510.1| DNA mismatch repair protein MutS [Neisseria meningitidis 65014]
gi|433529265|ref|ZP_20485869.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM3652]
gi|433531077|ref|ZP_20487657.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM3642]
gi|433533474|ref|ZP_20490029.1| DNA mismatch repair protein MutS [Neisseria meningitidis 2007056]
gi|433535605|ref|ZP_20492129.1| DNA mismatch repair protein MutS [Neisseria meningitidis 2001212]
gi|433542048|ref|ZP_20498486.1| DNA mismatch repair protein MutS [Neisseria meningitidis 63006]
gi|34222688|sp|Q9JWT7.1|MUTS_NEIMA RecName: Full=DNA mismatch repair protein MutS
gi|93117339|gb|ABE99587.1| MutS [Neisseria meningitidis]
gi|93117351|gb|ABE99593.1| MutS [Neisseria meningitidis]
gi|121051277|emb|CAM07553.1| DNA mismatch repair protein [Neisseria meningitidis Z2491]
gi|319411475|emb|CBY91891.1| DNA mismatch repair protein MutS [Neisseria meningitidis WUE 2594]
gi|432207457|gb|ELK63447.1| DNA mismatch repair protein MutS [Neisseria meningitidis 88050]
gi|432251629|gb|ELL06992.1| DNA mismatch repair protein MutS [Neisseria meningitidis 96023]
gi|432257203|gb|ELL12507.1| DNA mismatch repair protein MutS [Neisseria meningitidis 65014]
gi|432263220|gb|ELL18441.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM3652]
gi|432264466|gb|ELL19669.1| DNA mismatch repair protein MutS [Neisseria meningitidis 2007056]
gi|432264518|gb|ELL19720.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM3642]
gi|432268804|gb|ELL23970.1| DNA mismatch repair protein MutS [Neisseria meningitidis 2001212]
gi|432275119|gb|ELL30197.1| DNA mismatch repair protein MutS [Neisseria meningitidis 63006]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|421564246|ref|ZP_16010050.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM3081]
gi|402346211|gb|EJU81310.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM3081]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 49/64 (76%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL L
Sbjct: 625 LLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLVL 684
Query: 153 VDEL 156
+DE+
Sbjct: 685 MDEV 688
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCTTHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q E ++ ++K++ D+ER+
Sbjct: 325 TALDSQ---YEPLQCRLKNIADIERI 347
>gi|421543411|ref|ZP_15989506.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM255]
gi|402315057|gb|EJU50624.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM255]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|416189458|ref|ZP_11615371.1| DNA mismatch repair protein MutS [Neisseria meningitidis M0579]
gi|325135382|gb|EGC58003.1| DNA mismatch repair protein MutS [Neisseria meningitidis M0579]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|385342927|ref|YP_005896798.1| DNA mismatch repair protein MutS [Neisseria meningitidis
M01-240149]
gi|385858113|ref|YP_005904625.1| DNA mismatch repair protein MutS [Neisseria meningitidis NZ-05/33]
gi|416175176|ref|ZP_11609437.1| DNA mismatch repair protein MutS [Neisseria meningitidis
OX99.30304]
gi|325129270|gb|EGC52109.1| DNA mismatch repair protein MutS [Neisseria meningitidis
OX99.30304]
gi|325203133|gb|ADY98587.1| DNA mismatch repair protein MutS [Neisseria meningitidis
M01-240149]
gi|325209002|gb|ADZ04454.1| DNA mismatch repair protein MutS [Neisseria meningitidis NZ-05/33]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|93117345|gb|ABE99590.1| MutS [Neisseria meningitidis]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|444376499|ref|ZP_21175743.1| DNA mismatch repair protein MutS [Enterovibrio sp. AK16]
gi|443679477|gb|ELT86133.1| DNA mismatch repair protein MutS [Enterovibrio sp. AK16]
Length = 846
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 50/65 (76%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ G VPA+S+TL PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 621 TLMAHIGSYVPAESVTLGPVDRIFTRIGASDDLASGRSTFMVEMTETANILHNATENSLV 680
Query: 152 LVDEL 156
L+DE+
Sbjct: 681 LMDEI 685
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N E T+ LD T G R+L+ L +P+ + + +R DA
Sbjct: 256 ILDAATRRNLELTQNLSGGLENTVASVLDRTTTPMGSRLLKRWLHQPMRDFKIVNRRLDA 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I+ L D + + ++ + D+ER+L
Sbjct: 316 ITALKDTGLYVD-LANSLRPVGDMERIL 342
>gi|389606923|emb|CCA45834.1| DNA mismatch repair protein mutS [Neisseria meningitidis alpha522]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|421539120|ref|ZP_15985291.1| DNA mismatch repair protein MutS [Neisseria meningitidis 93003]
gi|402315232|gb|EJU50798.1| DNA mismatch repair protein MutS [Neisseria meningitidis 93003]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQYN---PLQCRLKNIADIERI 347
>gi|418287211|ref|ZP_12899841.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM233]
gi|418289450|ref|ZP_12901738.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM220]
gi|372203449|gb|EHP17121.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM220]
gi|372203980|gb|EHP17560.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM233]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCTTHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q E ++ ++K++ D+ER+
Sbjct: 325 TALDSQ---YEPLQCRLKNIADIERI 347
>gi|385852230|ref|YP_005898745.1| DNA mismatch repair protein MutS [Neisseria meningitidis
M04-240196]
gi|416185240|ref|ZP_11613414.1| DNA mismatch repair protein MutS [Neisseria meningitidis M13399]
gi|325133328|gb|EGC55994.1| DNA mismatch repair protein MutS [Neisseria meningitidis M13399]
gi|325207053|gb|ADZ02506.1| DNA mismatch repair protein MutS [Neisseria meningitidis
M04-240196]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|93117337|gb|ABE99586.1| MutS [Neisseria meningitidis]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|15677973|ref|NP_275145.1| DNA mismatch repair protein MutS [Neisseria meningitidis MC58]
gi|385854192|ref|YP_005900706.1| DNA mismatch repair protein MutS [Neisseria meningitidis H44/76]
gi|416198748|ref|ZP_11619115.1| DNA mismatch repair protein MutS [Neisseria meningitidis CU385]
gi|427827623|ref|ZP_18994654.1| DNA mismatch repair protein MutS [Neisseria meningitidis H44/76]
gi|433466138|ref|ZP_20423606.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM422]
gi|433489333|ref|ZP_20446478.1| DNA mismatch repair protein MutS [Neisseria meningitidis M13255]
gi|433489373|ref|ZP_20446514.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM418]
gi|433505896|ref|ZP_20462824.1| DNA mismatch repair protein MutS [Neisseria meningitidis 9506]
gi|433508149|ref|ZP_20465043.1| DNA mismatch repair protein MutS [Neisseria meningitidis 9757]
gi|433508203|ref|ZP_20465091.1| DNA mismatch repair protein MutS [Neisseria meningitidis 12888]
gi|433512407|ref|ZP_20469214.1| DNA mismatch repair protein MutS [Neisseria meningitidis 4119]
gi|34222689|sp|Q9JX94.1|MUTS_NEIMB RecName: Full=DNA mismatch repair protein MutS
gi|7227419|gb|AAF42468.1| DNA mismatch repair protein MutS [Neisseria meningitidis MC58]
gi|93117343|gb|ABE99589.1| MutS [Neisseria meningitidis H44/76]
gi|316984525|gb|EFV63491.1| DNA mismatch repair protein MutS [Neisseria meningitidis H44/76]
gi|325139470|gb|EGC62010.1| DNA mismatch repair protein MutS [Neisseria meningitidis CU385]
gi|325201196|gb|ADY96651.1| DNA mismatch repair protein MutS [Neisseria meningitidis H44/76]
gi|432200340|gb|ELK56437.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM422]
gi|432219986|gb|ELK75814.1| DNA mismatch repair protein MutS [Neisseria meningitidis M13255]
gi|432230810|gb|ELK86481.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM418]
gi|432238420|gb|ELK93986.1| DNA mismatch repair protein MutS [Neisseria meningitidis 9506]
gi|432238731|gb|ELK94296.1| DNA mismatch repair protein MutS [Neisseria meningitidis 9757]
gi|432244540|gb|ELL00028.1| DNA mismatch repair protein MutS [Neisseria meningitidis 4119]
gi|432250431|gb|ELL05825.1| DNA mismatch repair protein MutS [Neisseria meningitidis 12888]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K + D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKSIADIERI 347
>gi|433493592|ref|ZP_20450673.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM586]
gi|432225652|gb|ELK81393.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM586]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K + D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKSIADIERI 347
>gi|433480804|ref|ZP_20438081.1| DNA mismatch repair protein MutS [Neisseria meningitidis 63041]
gi|432213222|gb|ELK69147.1| DNA mismatch repair protein MutS [Neisseria meningitidis 63041]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|421539191|ref|ZP_15985358.1| DNA mismatch repair protein MutS [Neisseria meningitidis 93004]
gi|402322467|gb|EJU57927.1| DNA mismatch repair protein MutS [Neisseria meningitidis 93004]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|385856164|ref|YP_005902677.1| DNA mismatch repair protein MutS [Neisseria meningitidis
M01-240355]
gi|325205105|gb|ADZ00559.1| DNA mismatch repair protein MutS [Neisseria meningitidis
M01-240355]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|387121298|ref|YP_006287181.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|415755307|ref|ZP_11480858.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|416038925|ref|ZP_11574205.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|429733803|ref|ZP_19267856.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans Y4]
gi|347994753|gb|EGY36003.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans serotype a str. H5P1]
gi|348656029|gb|EGY71443.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans D17P-3]
gi|385875790|gb|AFI87349.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans D7S-1]
gi|429154137|gb|EKX96887.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans Y4]
Length = 866
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 633 TLMAYMGSFVPADSAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEKSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ ++ + QRQ AI
Sbjct: 269 LDAATRRNLELTQNLSGGTENTLAAVLDKCVTPMGSRLLKRWIHQPICDVAKLMQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+L+Q + ++ ++ + D+ER+L
Sbjct: 329 GAILEQD-LAADLQPYLQQVGDMERIL 354
>gi|421562240|ref|ZP_16008070.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM2795]
gi|421907761|ref|ZP_16337630.1| DNA mismatch repair protein mutS [Neisseria meningitidis alpha704]
gi|393291076|emb|CCI73637.1| DNA mismatch repair protein mutS [Neisseria meningitidis alpha704]
gi|402343368|gb|EJU78515.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM2795]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|390599126|gb|EIN08523.1| DNA mismatch repair protein Msh6 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1174
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD LA++ VL NSD T +G+L++ L C+T FGKR+ R L PL ++ I R DA
Sbjct: 557 VLDGQTLAHIEVLRNSDGTEDGSLLKLLGRCITPFGKRLFRIWLCMPLKRVEDINARLDA 616
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ LLD + K L DLER++
Sbjct: 617 VQDLLDNPSFEQMFTELAKGLPDLERIV 644
Score = 60.5 bits (145), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 42/71 (59%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + ++ G VPA S L PVD I TRMGA DN+ ST+ EL ES I+R A
Sbjct: 926 RMTAAGVIMAQLGMMVPARSAKLCPVDAILTRMGAYDNMFSNASTFKVELDESCKILREA 985
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 986 TPKSLVILDEL 996
>gi|365966579|ref|YP_004948141.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|444349109|ref|ZP_21156626.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
gi|365745492|gb|AEW76397.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans ANH9381]
gi|443545404|gb|ELT55213.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans serotype b str. S23A]
Length = 866
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 633 TLMAYMGSFVPADSAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEKSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ ++ + QRQ AI
Sbjct: 269 LDAATRRNLELTQNLSGGTENTLAAVLDKCVTPMGSRLLKRWIHQPICDVAKLMQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+L+Q + ++ ++ + D+ER+L
Sbjct: 329 GTILEQD-LAADLQPYLQQVGDMERIL 354
>gi|385329389|ref|YP_005883692.1| DNA mismatch repair protein [Neisseria meningitidis alpha710]
gi|308390240|gb|ADO32560.1| DNA mismatch repair protein [Neisseria meningitidis alpha710]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.4 bits (106), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|237838321|ref|XP_002368458.1| DNA mismatch repair protein, putative [Toxoplasma gondii ME49]
gi|211966122|gb|EEB01318.1| DNA mismatch repair protein, putative [Toxoplasma gondii ME49]
Length = 1607
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 46/59 (77%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPADS TL+PVDRIFTR+GA+D++ ST+L EL + +M + +++SLA++DEL
Sbjct: 1366 GCFVPADSCTLSPVDRIFTRLGAEDSILQGASTFLVELKDISELMTYGTRHSLAVIDEL 1424
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 50/100 (50%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ AL L +L D + L+ LD VT+FG R+LR LV PL N+ + +R DA
Sbjct: 882 VLDAHALRQLEILQTQDGCAKQALLGYLDRTVTAFGHRLLRRWLVAPLRNVAELTRRLDA 941
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCR 100
+ L + +R ++ D+ER+ QG R
Sbjct: 942 VDWLCNSPESVADIRKALQACPDIERLSAKICAQGLQGER 981
>gi|121635803|ref|YP_976048.1| DNA mismatch repair protein MutS [Neisseria meningitidis FAM18]
gi|304388796|ref|ZP_07370852.1| DNA mismatch repair protein MutS [Neisseria meningitidis ATCC
13091]
gi|416180275|ref|ZP_11611416.1| DNA mismatch repair protein MutS [Neisseria meningitidis M6190]
gi|416193780|ref|ZP_11617336.1| DNA mismatch repair protein MutS [Neisseria meningitidis ES14902]
gi|433495644|ref|ZP_20452701.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM762]
gi|433495712|ref|ZP_20452765.1| DNA mismatch repair protein MutS [Neisseria meningitidis M7089]
gi|433499758|ref|ZP_20456759.1| DNA mismatch repair protein MutS [Neisseria meningitidis M7124]
gi|433501827|ref|ZP_20458806.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM174]
gi|433503863|ref|ZP_20460814.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM126]
gi|166232125|sp|A1KWM6.1|MUTS_NEIMF RecName: Full=DNA mismatch repair protein MutS
gi|120867509|emb|CAM11286.1| DNA mismatch repair protein [Neisseria meningitidis FAM18]
gi|304337248|gb|EFM03426.1| DNA mismatch repair protein MutS [Neisseria meningitidis ATCC
13091]
gi|325131244|gb|EGC53956.1| DNA mismatch repair protein MutS [Neisseria meningitidis M6190]
gi|325137418|gb|EGC60006.1| DNA mismatch repair protein MutS [Neisseria meningitidis ES14902]
gi|432227030|gb|ELK82745.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM762]
gi|432232441|gb|ELK88086.1| DNA mismatch repair protein MutS [Neisseria meningitidis M7124]
gi|432232828|gb|ELK88464.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM174]
gi|432238014|gb|ELK93597.1| DNA mismatch repair protein MutS [Neisseria meningitidis M7089]
gi|432238137|gb|ELK93713.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM126]
Length = 864
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|380011142|ref|XP_003689671.1| PREDICTED: probable DNA mismatch repair protein Msh6-like [Apis
florea]
Length = 1126
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA S LT VDRIFTR+GA D++ QST+L EL+E+ I++HA+ YSL L+DEL
Sbjct: 932 GSYVPASSCRLTLVDRIFTRLGANDDILAGQSTFLVELSETSAILQHATPYSLVLLDEL 990
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ + NL + EG+LI+ LD C T+FGKR+LR + +P D I +RQ A
Sbjct: 537 VLDAITINNLRIFG------EGSLIKTLDRCCTAFGKRLLREWVCRPSCRKDVIIERQKA 590
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L+D + R+ + L DLER+L
Sbjct: 591 IQELMDHSETIQTARSILAGLPDLERLL 618
>gi|87122440|ref|ZP_01078320.1| DNA mismatch repair protein MutS [Marinomonas sp. MED121]
gi|86162233|gb|EAQ63518.1| DNA mismatch repair protein MutS [Marinomonas sp. MED121]
Length = 868
Score = 72.8 bits (177), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 44/153 (28%), Positives = 79/153 (51%), Gaps = 17/153 (11%)
Query: 20 TEGTLIEQLDHCVTSFGKRMLRAQLVKPL----TNLDAIKQRQDAISVLLDQKHITEQM- 74
T + +LD + +F +R R + V+P+ ++ ++ R + ++ + I +
Sbjct: 549 TSSNALSELD-VLANFAERAERHRYVRPVIEDKPGIEILEGRHPVVESVITEPFIPNDLI 607
Query: 75 -----------RAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDN 123
M R + T L+ GC VPA++ L+ VDRIFTRMG+ D+
Sbjct: 608 MSPERSLLMITGPNMGGKSTYMRQIALITLLAHTGCFVPAEAANLSLVDRIFTRMGSSDD 667
Query: 124 LSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
L+G +ST++ E+TE+ I+ +A+ SL L+DE+
Sbjct: 668 LAGGRSTFMVEMTETANILNNATPKSLVLMDEV 700
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D NL + N +T TL LD C + G R+L+ L +P NL I RQDA+
Sbjct: 272 IDGATRRNLEIDLNLSGSTSNTLTSVLDRCSSPMGSRLLKRWLHQPSRNLSIINARQDAV 331
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
L++ ++ + ++ ++K++ D+ER+L
Sbjct: 332 QNLIN-NYLYDLIKPELKEVGDIERIL 357
>gi|421562181|ref|ZP_16008017.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM2657]
gi|433537764|ref|ZP_20494255.1| DNA mismatch repair protein MutS [Neisseria meningitidis 77221]
gi|254671276|emb|CBA08590.1| DNA mismatch repair protein MutS [Neisseria meningitidis alpha153]
gi|402335570|gb|EJU70835.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM2657]
gi|432270513|gb|ELL25651.1| DNA mismatch repair protein MutS [Neisseria meningitidis 77221]
Length = 864
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K + D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKSIADIERI 347
>gi|359499686|gb|AEV53239.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
mannitolilytica]
Length = 217
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPA++ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPAEAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|254804045|ref|YP_003082266.1| DNA mismatch repair protein MutS [Neisseria meningitidis alpha14]
gi|254667587|emb|CBA03335.1| DNA mismatch repair protein MutS [Neisseria meningitidis alpha14]
Length = 864
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNHAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q E ++ ++K + D+ER+
Sbjct: 325 AALESQ---YEPLQCRLKSIADIERI 347
>gi|91792565|ref|YP_562216.1| DNA mismatch repair protein MutS [Shewanella denitrificans OS217]
gi|123166308|sp|Q12PY3.1|MUTS_SHEDO RecName: Full=DNA mismatch repair protein MutS
gi|91714567|gb|ABE54493.1| DNA mismatch repair protein MutS [Shewanella denitrificans OS217]
Length = 862
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ ++ GC VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL
Sbjct: 635 SLMAHIGCFVPADSAVIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATSQSLV 694
Query: 152 LVDEL 156
L+DE+
Sbjct: 695 LMDEI 699
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N E TL LD+ T G RML+ L +PL + + I R +A
Sbjct: 270 ILDAATRRNLELTQNLSGGREHTLAWVLDNTATPMGSRMLQRWLHQPLRDNNIIASRHNA 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
++ L++ ++ +++ ++K L D+ER++
Sbjct: 330 VAELIE-ANLFDELHQQLKSLGDIERIM 356
>gi|421560152|ref|ZP_16006015.1| DNA mismatch repair protein MutS [Neisseria meningitidis 92045]
gi|402333808|gb|EJU69106.1| DNA mismatch repair protein MutS [Neisseria meningitidis 92045]
Length = 864
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 43.1 bits (100), Expect = 0.042, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL + I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRSRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|416071895|ref|ZP_11583973.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|444331446|ref|ZP_21148904.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
gi|347998256|gb|EGY39192.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans serotype f str. D18P1]
gi|443552436|gb|ELT59798.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans serotype a str. A160]
Length = 866
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 633 TLMAYMGSFVPADSAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEKSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ ++ + QRQ AI
Sbjct: 269 LDAATRRNLELTQNLSGGTENTLAAVLDKCVTPMGSRLLKRWIHQPICDVAKLMQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+L+Q + ++ ++ + D+ER+L
Sbjct: 329 GTILEQD-LAADLQPYLQQVGDMERIL 354
>gi|328779790|ref|XP_392346.4| PREDICTED: probable DNA mismatch repair protein Msh6 [Apis
mellifera]
Length = 1129
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA S LT VDRIFTR+GA D++ QST+L EL+E+ I++HA+ YSL L+DEL
Sbjct: 935 GSYVPASSCRLTLVDRIFTRLGANDDILAGQSTFLVELSETSAILQHATPYSLVLLDEL 993
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ + NL + EG+LI+ LD C T+FGKR+LR + +P D I +RQ+A
Sbjct: 540 VLDAITINNLRIFG------EGSLIKTLDRCCTAFGKRLLREWICRPSCRKDVIIERQEA 593
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L++ + R+ + L DLER+L
Sbjct: 594 IQELMNHSEAVQTTRSILAGLPDLERLL 621
>gi|403332180|gb|EJY65086.1| MutS domain III family protein [Oxytricha trifallax]
Length = 1185
Score = 72.4 bits (176), Expect = 5e-11, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 58/88 (65%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LDS AL +L V+ ++ EG+L+ +DHC + FG+R L+ ++ PL N+ I++R DA
Sbjct: 580 VLDSQALQHLEVVESASGKFEGSLLHYIDHCKSPFGRRQLKRWVLSPLMNIQRIEERLDA 639
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L+ ++ T+ R+K+ L D+E++L
Sbjct: 640 IEDLIQHQYETDVFRSKLSKLPDIEKLL 667
Score = 66.2 bits (160), Expect = 5e-09, Method: Composition-based stats.
Identities = 31/59 (52%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S+ L PVDRIFTR+GA D + +ST+ E+ E++ I++ A+ SLA+VDEL
Sbjct: 994 GCYVPAQSIKLNPVDRIFTRIGASDRILEGKSTFYVEMEETKNIIQFATFKSLAIVDEL 1052
>gi|421545481|ref|ZP_15991544.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM140]
gi|421547532|ref|ZP_15993567.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM183]
gi|421549564|ref|ZP_15995577.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM2781]
gi|421551752|ref|ZP_15997737.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM576]
gi|402320842|gb|EJU56323.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM183]
gi|402321028|gb|EJU56508.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM140]
gi|402323271|gb|EJU58717.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM2781]
gi|402333313|gb|EJU68619.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM576]
Length = 864
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K + D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKSIADIERI 347
>gi|385340990|ref|YP_005894862.1| DNA mismatch repair protein MutS [Neisseria meningitidis G2136]
gi|416199321|ref|ZP_11619330.1| DNA mismatch repair protein MutS [Neisseria meningitidis 961-5945]
gi|433468153|ref|ZP_20425599.1| DNA mismatch repair protein MutS [Neisseria meningitidis 87255]
gi|325143395|gb|EGC65724.1| DNA mismatch repair protein MutS [Neisseria meningitidis 961-5945]
gi|325199234|gb|ADY94690.1| DNA mismatch repair protein MutS [Neisseria meningitidis G2136]
gi|432200468|gb|ELK56559.1| DNA mismatch repair protein MutS [Neisseria meningitidis 87255]
Length = 864
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K + D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKSIADIERI 347
>gi|261866758|ref|YP_003254680.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans D11S-1]
gi|261412090|gb|ACX81461.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans D11S-1]
Length = 866
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 633 TLMAYMGSFVPADSAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEKSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ ++ + QRQ AI
Sbjct: 269 LDAATRRNLELTQNLSGGTENTLAAVLDKCVTPMGSRLLKRWIHQPICDVAKLMQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+L+Q + ++ ++ + D+ER+L
Sbjct: 329 GTILEQD-LAADLQPYLQQVGDMERIL 354
>gi|416076066|ref|ZP_11585240.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|444337853|ref|ZP_21151775.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
gi|348005422|gb|EGY45905.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans serotype b str. SCC1398]
gi|443546076|gb|ELT55779.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans serotype b str. SCC4092]
Length = 866
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 633 TLMAYMGSFVPADSAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEKSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ ++ + QRQ AI
Sbjct: 269 LDAATRRNLELTQNLSGGTENTLAAVLDKCVTPMGSRLLKRWIHQPICDVAKLMQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+L+Q + ++ ++ + D+ER+L
Sbjct: 329 GTILEQD-LAADLQPYLQQVGDMERIL 354
>gi|416052761|ref|ZP_11578396.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
gi|347991553|gb|EGY33016.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans serotype e str. SC1083]
Length = 866
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 633 TLMAYMGSFVPADSAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEKSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ ++ + QRQ AI
Sbjct: 269 LDAATRRNLELTQNLAGGTENTLAAVLDKCVTPMGSRLLKRWIHQPICDVTKLTQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
S +L+Q + ++ ++ + D+ER+L
Sbjct: 329 SAILEQD-LAADLQPYLQQVGDMERIL 354
>gi|444346405|ref|ZP_21154372.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
gi|443541746|gb|ELT52152.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans serotype c str. AAS4A]
Length = 866
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 633 TLMAYMGSFVPADSAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEKSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ ++ + QRQ AI
Sbjct: 269 LDAATRRNLELTQNLSGGTENTLAAVLDKCVTPMGSRLLKRWIHQPICDVAKLMQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+L+Q + ++ ++ + D+ER+L
Sbjct: 329 GTILEQD-LAADLQPYLQQVGDMERIL 354
>gi|421556013|ref|ZP_16001932.1| DNA mismatch repair protein MutS [Neisseria meningitidis 80179]
gi|421567984|ref|ZP_16013715.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM3001]
gi|402338420|gb|EJU73654.1| DNA mismatch repair protein MutS [Neisseria meningitidis 80179]
gi|402342929|gb|EJU78085.1| DNA mismatch repair protein MutS [Neisseria meningitidis NM3001]
Length = 864
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 43/86 (50%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K + D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKSIADIERI 347
>gi|418464778|ref|ZP_13035717.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans RhAA1]
gi|359756733|gb|EHK90890.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans RhAA1]
Length = 866
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 633 TLMAYMGSFVPADSAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEKSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ ++ + QRQ AI
Sbjct: 269 LDAATRRNLELTQNLAGGTENTLAAVLDKCVTPMGSRLLKRWIHQPICDVAKLMQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+L+Q + ++ ++ + D+ER+L
Sbjct: 329 GAILEQD-LAADLQPYLQQVGDMERIL 354
>gi|415770093|ref|ZP_11484708.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans D17P-2]
gi|348657126|gb|EGY74723.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans D17P-2]
Length = 866
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 633 TLMAYMGSFVPADSAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEKSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ ++ + QRQ AI
Sbjct: 269 LDAATRRNLELTQNLSGGTENTLAAVLDKCVTPMGSRLLKRWIHQPICDVAKLMQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+L+Q + ++ ++ + D+ER+L
Sbjct: 329 GTILEQD-LAADLQPYLQQVGDMERIL 354
>gi|313227995|emb|CBY23144.1| unnamed protein product [Oikopleura dioica]
Length = 1136
Score = 72.4 bits (176), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L+ GC VPA+S+ +PVDRIFTR+G D L +ST++ E+ E+ +I++ ++K SL
Sbjct: 941 TLLAHYGCAVPAESMQFSPVDRIFTRLGCSDRLLAGESTFMVEMAETSSILKSSTKRSLL 1000
Query: 152 LVDEL 156
L+DEL
Sbjct: 1001 LLDEL 1005
Score = 62.0 bits (149), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 35/104 (33%), Positives = 52/104 (50%), Gaps = 2/104 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ L NL V D T G+ + +LD C ++ GKR L ++ P N D I+ RQ
Sbjct: 555 IMDAATLINLGVTQGDDGTERGSCLRKLDTCCSAGGKRKLWETVISPPANPDVIRHRQKC 614
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPAD 104
I L+D + + R + DL R++ LS G R P+D
Sbjct: 615 IKALMDNQEFCKDARKLISGFPDLARLISRFGNLSI-GIR-PSD 656
>gi|406864091|gb|EKD17137.1| DNA mismatch repair protein Msh6 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1949
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL V N+ D + GTL L+ CVT FGKRM R + PL + D I +R D
Sbjct: 1352 VLDGQTLINLEVFANTFDGSKAGTLFALLNRCVTPFGKRMFRQWVCHPLADADRINERLD 1411
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L + +++Q A M + DLER++
Sbjct: 1412 AVDMLNKDRTLSDQFVASMSSMPDLERLI 1440
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + ++ GC VP S TLTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A
Sbjct: 1718 RMTCVAVIMAQIGCYVPCISATLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILAEA 1777
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1778 TPRSLVILDEL 1788
>gi|354598859|ref|ZP_09016876.1| DNA mismatch repair protein mutS [Brenneria sp. EniD312]
gi|353676794|gb|EHD22827.1| DNA mismatch repair protein mutS [Brenneria sp. EniD312]
Length = 852
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 46/59 (77%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPAD T+ PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL L+DE+
Sbjct: 637 GCFVPADRATIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEI 695
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N TE TL LD VT+ G RML+ + P ++ A+ QRQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGTENTLAAVLDCTVTAMGSRMLKRWIHMPSRDIAALTQRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I+ L D IT +++ ++ + DLER+L
Sbjct: 328 IAALRD---ITPELQPYLRQVGDLERIL 352
>gi|54288190|gb|AAV31540.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 227
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAAIIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|402222110|gb|EJU02177.1| hypothetical protein DACRYDRAFT_21918 [Dacryopinax sp. DJM-731 SS1]
Length = 975
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 51/88 (57%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD LA++ VL NS++T EGTL+ L+ CVT FGKR+ R L PL + AI R DA
Sbjct: 381 VLDGQTLAHIEVLVNSESTDEGTLLNLLNRCVTPFGKRLFRIWLCMPLREVKAINARLDA 440
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ L+ + + L DLERM+
Sbjct: 441 VDDLMSRPSFEATFGKLSRGLPDLERMV 468
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 41/73 (56%)
Query: 84 LERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMR 143
L RM + ++ G VPA L PVD I TRMGA DN+ ST+ EL E I+R
Sbjct: 743 LMRMTAAGVIMAQLGMYVPAAFAKLAPVDAILTRMGAYDNMFTNASTFKVELDECCKILR 802
Query: 144 HASKYSLALVDEL 156
A+ SL ++DEL
Sbjct: 803 DATPRSLVILDEL 815
>gi|359499630|gb|AEV53211.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
solanacearum]
Length = 217
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAAIIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|366159730|ref|ZP_09459592.1| DNA mismatch repair protein MutS [Escherichia sp. TW09308]
gi|432373308|ref|ZP_19616345.1| DNA mismatch repair protein mutS [Escherichia coli KTE11]
gi|430894815|gb|ELC17099.1| DNA mismatch repair protein mutS [Escherichia coli KTE11]
Length = 853
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 49/64 (76%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA S+ + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQSVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|357612845|gb|EHJ68197.1| putative DNA mismatch repair protein muts [Danaus plexippus]
Length = 622
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/65 (50%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L+ GC VPA L+ DRIFTR+GA D++ QST+L E+ E+ I++HA+K+SL
Sbjct: 415 TVLAHLGCHVPASECRLSVCDRIFTRLGASDDILSGQSTFLVEMNETAAIVKHATKHSLV 474
Query: 152 LVDEL 156
L+DEL
Sbjct: 475 LLDEL 479
>gi|54288184|gb|AAV31537.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 227
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAAIIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|389747671|gb|EIM88849.1| DNA mismatch repair protein Msh6 [Stereum hirsutum FP-91666 SS1]
Length = 1195
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD LA++ VL N++ T EG+L+E L CVT FGKR+ R L PL + I R DA
Sbjct: 586 VLDGQTLAHIEVLVNNEGTEEGSLLELLGRCVTPFGKRLFRIWLCMPLREIKDINARLDA 645
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRV 101
I L+ EQ K L DLER++ + + + C+V
Sbjct: 646 IEDLMRDLSFEEQFVKVAKGLPDLERIV---SRIHAKNCKV 683
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 41/71 (57%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + ++ G VPA L+PVD I TRMGA DN+ ST+ EL E I+R A
Sbjct: 957 RMTATGVIMAQLGMYVPAQKARLSPVDSILTRMGAYDNMFSNASTFKVELDECCKILRDA 1016
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1017 TPRSLVILDEL 1027
>gi|54288208|gb|AAV31549.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 227
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAAIIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|54288136|gb|AAV31513.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288156|gb|AAV31523.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|54288236|gb|AAV31563.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 227
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAAIIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|399912477|ref|ZP_10780791.1| DNA mismatch repair protein MutS [Halomonas sp. KM-1]
Length = 863
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L+ G VPAD + PVDRIFTR+G+ D+L+G +ST++ E+TE+ +I+ +A+ +SL
Sbjct: 636 TLLAHTGSFVPADEACIGPVDRIFTRIGSSDDLAGGRSTFMVEMTETASILHNATDHSLV 695
Query: 152 LVDEL 156
L+DE+
Sbjct: 696 LMDEI 700
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D+ + NL + N + TL LD T+ G R+L+ L +PL + ++ RQ A
Sbjct: 270 VIDAASRRNLEIDINLGGGGDNTLASVLDTTATAMGSRLLKRWLNRPLRDRSQVQGRQAA 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+++LL+Q+ +R +K + D+ER+L
Sbjct: 330 VALLLEQEGFV-ALRELLKAIGDVERIL 356
>gi|13241586|gb|AAK16386.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241588|gb|AAK16387.1| DNA mismatch repair protein MutS [Escherichia coli]
Length = 126
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 49/63 (77%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++AE+TE+ I+ +A++YSL L+
Sbjct: 30 MAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMAEMTETANILHNATEYSLVLM 89
Query: 154 DEL 156
DE+
Sbjct: 90 DEI 92
>gi|423133284|ref|ZP_17120931.1| DNA mismatch repair protein mutS [Myroides odoratimimus CIP 101113]
gi|371649340|gb|EHO14821.1| DNA mismatch repair protein mutS [Myroides odoratimimus CIP 101113]
Length = 865
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 20/154 (12%)
Query: 22 GTLIEQLDHCVTSFGKRMLRAQLVKPLTN----LDAIKQRQDAISVLL--DQKHITEQMR 75
LI QLD C++SF ++ L V+PL + LD R I L D +IT +
Sbjct: 549 ANLIAQLD-CLSSFAQQALENNYVRPLIDDSYELDIKDGRHPVIEKQLAYDTPYITNDVY 607
Query: 76 AKMKDLRDLERMLPSST-------------FLSFQGCRVPADSLTLTPVDRIFTRMGAKD 122
K+ + + P+ + L+ G VPA + + PVD+IFTR+GA D
Sbjct: 608 LNNKEQQIIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAREVRMGPVDKIFTRVGASD 667
Query: 123 NLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
N+S +ST++ E+ E+ +I+ + S SL L+DE+
Sbjct: 668 NISMGESTFMVEMNETASILNNISDRSLVLLDEI 701
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D + NL L NS N TL++ +D ++ G R+L+ L PL + I R + +
Sbjct: 270 MDRFTIRNLE-LYNSANLNAITLLDVIDKTLSPMGGRLLKRWLALPLKDTKKITDRHNIV 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+L + + + ++K + DLER++
Sbjct: 329 EILKENSELLTLFQTQIKKISDLERLI 355
>gi|416108642|ref|ZP_11591137.1| LOW QUALITY PROTEIN: DNA mismatch repair protein MutS
[Aggregatibacter actinomycetemcomitans serotype c str.
SCC2302]
gi|348004167|gb|EGY44692.1| LOW QUALITY PROTEIN: DNA mismatch repair protein MutS
[Aggregatibacter actinomycetemcomitans serotype c str.
SCC2302]
Length = 723
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 633 TLMAYMGSFVPADSAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEKSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ ++ + QRQ AI
Sbjct: 269 LDAATRRNLELTQNLSGGTENTLAAVLDKCVTPMGSRLLKRWIHQPICDVAKLMQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+L+Q + ++ ++ + D+ER+L
Sbjct: 329 GTILEQD-LAADLQPYLQQVGDMERIL 354
>gi|45645391|gb|AAS73295.1| DNA mismatch repair protein [Haemophilus influenzae]
Length = 861
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 51/72 (70%), Gaps = 2/72 (2%)
Query: 87 MLPSS--TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRH 144
M P++ T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+
Sbjct: 626 MRPTALITLLAYIGSFVPADSAGIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQ 685
Query: 145 ASKYSLALVDEL 156
A++ SL L+DE+
Sbjct: 686 ATEQSLVLIDEI 697
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ +I
Sbjct: 269 LDAATRRNLELTQNLAGGTENTLSSVLDKCVTPMGSRLLKRWIHQPVRDVEKLKQRQQSI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|59802243|ref|YP_208955.1| DNA mismatch repair protein MutS [Neisseria gonorrhoeae FA 1090]
gi|240013066|ref|ZP_04719979.1| DNA mismatch repair protein [Neisseria gonorrhoeae DGI18]
gi|240017635|ref|ZP_04724175.1| DNA mismatch repair protein [Neisseria gonorrhoeae FA6140]
gi|240122256|ref|ZP_04735218.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID24-1]
gi|254493446|ref|ZP_05106617.1| DNA mismatch repair protein [Neisseria gonorrhoeae 1291]
gi|268595791|ref|ZP_06129958.1| DNA mismatch repair protein mutS [Neisseria gonorrhoeae 35/02]
gi|268600236|ref|ZP_06134403.1| DNA mismatch repair protein [Neisseria gonorrhoeae MS11]
gi|268602476|ref|ZP_06136643.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID18]
gi|268604743|ref|ZP_06138910.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID1]
gi|268681022|ref|ZP_06147884.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID332]
gi|268685297|ref|ZP_06152159.1| DNA mismatch repair protein [Neisseria gonorrhoeae SK-92-679]
gi|268685503|ref|ZP_06152365.1| DNA mismatch repair protein [Neisseria gonorrhoeae SK-93-1035]
gi|291044964|ref|ZP_06570673.1| DNA mismatch repair protein mutS [Neisseria gonorrhoeae DGI2]
gi|293398034|ref|ZP_06642240.1| DNA mismatch repair protein MutS [Neisseria gonorrhoeae F62]
gi|385336738|ref|YP_005890685.1| DNA mismatch repair protein MutS [Neisseria gonorrhoeae
TCDC-NG08107]
gi|75507286|sp|Q5F5J4.1|MUTS_NEIG1 RecName: Full=DNA mismatch repair protein MutS
gi|59719138|gb|AAW90543.1| putative DNA mismatch repair protein [Neisseria gonorrhoeae FA
1090]
gi|226512486|gb|EEH61831.1| DNA mismatch repair protein [Neisseria gonorrhoeae 1291]
gi|268549180|gb|EEZ44598.1| DNA mismatch repair protein mutS [Neisseria gonorrhoeae 35/02]
gi|268584367|gb|EEZ49043.1| DNA mismatch repair protein [Neisseria gonorrhoeae MS11]
gi|268586607|gb|EEZ51283.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID18]
gi|268588874|gb|EEZ53550.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID1]
gi|268621306|gb|EEZ53706.1| DNA mismatch repair protein [Neisseria gonorrhoeae PID332]
gi|268625581|gb|EEZ57981.1| DNA mismatch repair protein [Neisseria gonorrhoeae SK-92-679]
gi|268625787|gb|EEZ58187.1| DNA mismatch repair protein [Neisseria gonorrhoeae SK-93-1035]
gi|291011858|gb|EFE03854.1| DNA mismatch repair protein mutS [Neisseria gonorrhoeae DGI2]
gi|291611980|gb|EFF41049.1| DNA mismatch repair protein MutS [Neisseria gonorrhoeae F62]
gi|317165281|gb|ADV08822.1| DNA mismatch repair protein MutS [Neisseria gonorrhoeae
TCDC-NG08107]
Length = 864
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ PVD+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ S+
Sbjct: 624 VLLAHTGCFVPADAATIGPVDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSIV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKTPTLFSILDGCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q E ++ +K + D+ER+
Sbjct: 325 TALESQ---YEPLQCHLKSIADIERI 347
>gi|423328882|ref|ZP_17306689.1| DNA mismatch repair protein mutS [Myroides odoratimimus CCUG 3837]
gi|404604113|gb|EKB03753.1| DNA mismatch repair protein mutS [Myroides odoratimimus CCUG 3837]
Length = 865
Score = 72.4 bits (176), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 20/154 (12%)
Query: 22 GTLIEQLDHCVTSFGKRMLRAQLVKPLTN----LDAIKQRQDAISVLL--DQKHITEQMR 75
LI QLD C++SF ++ L V+PL + LD R I L D +IT +
Sbjct: 549 ANLIAQLD-CLSSFAQQALENNYVRPLIDDSYELDIKDGRHPVIEKQLAYDTPYITNDVY 607
Query: 76 AKMKDLRDLERMLPSST-------------FLSFQGCRVPADSLTLTPVDRIFTRMGAKD 122
K+ + + P+ + L+ G VPA + + PVD+IFTR+GA D
Sbjct: 608 LNNKEQQIIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAREVRMGPVDKIFTRVGASD 667
Query: 123 NLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
N+S +ST++ E+ E+ +I+ + S SL L+DE+
Sbjct: 668 NISMGESTFMVEMNETASILNNISDRSLVLLDEI 701
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D + NL L NS N TL++ +D ++ G R+L+ L PL + I R + +
Sbjct: 270 MDRFTIRNLE-LYNSANLNAITLLDVIDKTLSPMGGRLLKRWLALPLKDTKKITDRHNIV 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+L + + + ++K + DLER++
Sbjct: 329 EILKENSELLTLFQTQIKKISDLERLI 355
>gi|416060156|ref|ZP_11580802.1| LOW QUALITY PROTEIN: DNA mismatch repair protein MutS
[Aggregatibacter actinomycetemcomitans serotype e str.
SCC393]
gi|347998571|gb|EGY39484.1| LOW QUALITY PROTEIN: DNA mismatch repair protein MutS
[Aggregatibacter actinomycetemcomitans serotype e str.
SCC393]
Length = 723
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 633 TLMAYMGSFVPADSAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEKSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ ++ + QRQ AI
Sbjct: 269 LDAATRRNLELTQNLSGGTENTLAAVLDKCVTPMGSRLLKRWIHQPICDVAKLMQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+L+Q + ++ ++ + D+ER+L
Sbjct: 329 GTILEQD-LAADLQPYLQQVGDMERIL 354
>gi|268597981|ref|ZP_06132148.1| DNA mismatch repair protein mutS [Neisseria gonorrhoeae FA19]
gi|268551769|gb|EEZ46788.1| DNA mismatch repair protein mutS [Neisseria gonorrhoeae FA19]
Length = 864
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ PVD+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ S+
Sbjct: 624 VLLAHTGCFVPADAATIGPVDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSIV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKTPTLFSILDGCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q E ++ +K + D+ER+
Sbjct: 325 TALESQ---YEPLQCHLKSIADIERI 347
>gi|170590105|ref|XP_001899813.1| MutS domain III family protein [Brugia malayi]
gi|158592732|gb|EDP31329.1| MutS domain III family protein [Brugia malayi]
Length = 1182
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA+ + L+PVDRIFTRMGA D ++ QST+ EL E+ I+R+A+K+SL ++DEL
Sbjct: 977 GSFVPANEMKLSPVDRIFTRMGAGDRITTGQSTFYVELYETNLILRNATKHSLVIMDEL 1035
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQL----------DHCVTSFGKRMLRAQLVKPLTN 50
ILDS AL +L+++ + + TL + + + C+T GKR+LR + P+ +
Sbjct: 553 ILDSLALKHLNIIPPISSMQKFTLCDPITAKYALYNVINKCITPAGKRLLRQWICAPVCD 612
Query: 51 LDAIKQRQDAISVLLDQ--KHITEQMRAKMKDLRDLERML 88
+ RQDAI L K ++ ++ + DLER++
Sbjct: 613 RKILCSRQDAIEWLSKARLKRFIDKAVELLRKVPDLERLI 652
>gi|433525065|ref|ZP_20481716.1| DNA mismatch repair protein MutS [Neisseria meningitidis 97020]
gi|432257187|gb|ELL12492.1| DNA mismatch repair protein MutS [Neisseria meningitidis 97020]
Length = 808
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 49/64 (76%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL L
Sbjct: 625 LLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLVL 684
Query: 153 VDEL 156
+DE+
Sbjct: 685 MDEV 688
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|92112754|ref|YP_572682.1| DNA mismatch repair protein MutS [Chromohalobacter salexigens DSM
3043]
gi|122420681|sp|Q1QZX5.1|MUTS_CHRSD RecName: Full=DNA mismatch repair protein MutS
gi|91795844|gb|ABE57983.1| DNA mismatch repair protein MutS [Chromohalobacter salexigens DSM
3043]
Length = 859
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD + PVDRIFTR+G+ D+L+G +ST++ E+TE+ TI+ +A+++SL
Sbjct: 632 ALLAHTGSCVPADEAEIGPVDRIFTRIGSSDDLAGGRSTFMVEMTETATILHNATEHSLV 691
Query: 152 LVDEL 156
L+DE+
Sbjct: 692 LMDEI 696
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/89 (33%), Positives = 50/89 (56%), Gaps = 3/89 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D+ + NL + TN + TL LD T+ G R L+ L +PL ++ I+ RQ A
Sbjct: 266 VIDAASRRNLEIDTNLGGGFDNTLASVLDTTATAMGSRQLKRWLNRPLRDIAQIQSRQAA 325
Query: 61 ISVLLD-QKHITEQMRAKMKDLRDLERML 88
+ L+D +H T +R +K + D+ER+L
Sbjct: 326 VQCLIDADRHAT--LRDALKAIGDIERIL 352
>gi|315633343|ref|ZP_07888634.1| DNA mismatch repair protein MutS [Aggregatibacter segnis ATCC
33393]
gi|315477843|gb|EFU68584.1| DNA mismatch repair protein MutS [Aggregatibacter segnis ATCC
33393]
Length = 866
Score = 72.4 bits (176), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPADS + PVDRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLMAYMGSFVPADSAVIGPVDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATDKSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 56.2 bits (134), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ + QRQ AI
Sbjct: 269 LDAATRRNLELTQNLAGGTENTLAAVLDKCVTPMGSRLLKRWIHQPICDVEKLTQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+L+Q + + ++ ++ + D+ER+L
Sbjct: 329 GAILEQDLVAD-LQPYLQQVGDMERIL 354
>gi|433514491|ref|ZP_20471273.1| DNA mismatch repair protein MutS [Neisseria meningitidis 63049]
gi|432245453|gb|ELL00923.1| DNA mismatch repair protein MutS [Neisseria meningitidis 63049]
Length = 808
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 49/64 (76%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL L
Sbjct: 625 LLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLVL 684
Query: 153 VDEL 156
+DE+
Sbjct: 685 MDEV 688
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCTTHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q E ++ ++K++ D+ER+
Sbjct: 325 TALDSQ---YEPLQCRLKNIADIERI 347
>gi|350419676|ref|XP_003492265.1| PREDICTED: probable DNA mismatch repair protein Msh6-like [Bombus
impatiens]
Length = 1129
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA S LT VDRIFTR+GA D++ QST+L EL+E+ I++HA+ YSL L+DEL
Sbjct: 935 GSYVPASSCRLTLVDRIFTRLGANDDILAGQSTFLVELSETAAILQHATPYSLVLLDEL 993
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ + NL + EG+L++ LD C T+FGKR+LR + +P + I +RQ A
Sbjct: 540 VLDAITINNLRIFG------EGSLMKTLDRCCTAFGKRLLREWICRPSCRKNIIIERQQA 593
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L+D + + R+ + L DLER+L
Sbjct: 594 IQELMDNTEVMQNARSILAGLPDLERLL 621
>gi|416094389|ref|ZP_11588546.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
gi|348008664|gb|EGY48916.1| DNA mismatch repair protein MutS [Aggregatibacter
actinomycetemcomitans serotype b str. I23C]
Length = 696
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 606 TLMAYMGSFVPADSAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEKSLV 665
Query: 152 LVDEL 156
L+DE+
Sbjct: 666 LIDEI 670
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ ++ + QRQ AI
Sbjct: 242 LDAATRRNLELTQNLSGGTENTLAAVLDKCVTPMGSRLLKRWIHQPICDVAKLMQRQQAI 301
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+L+Q + ++ ++ + D+ER+L
Sbjct: 302 GTILEQD-LAADLQPYLQQVGDMERIL 327
>gi|262376218|ref|ZP_06069448.1| DNA mismatch repair protein MutS [Acinetobacter lwoffii SH145]
gi|262308819|gb|EEY89952.1| DNA mismatch repair protein MutS [Acinetobacter lwoffii SH145]
Length = 842
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPA + TL PVDR+FTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 609 VLLAYCGAYVPAQAATLGPVDRVFTRIGSADDLSTGKSTFMVEMTETSQILHHATSQSLV 668
Query: 152 LVDEL 156
L+DE+
Sbjct: 669 LMDEV 673
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 35/117 (29%), Positives = 56/117 (47%), Gaps = 7/117 (5%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++PL + + +R DAI LL H +R +K++
Sbjct: 262 SLFQLINDCQTAMGGRLLSRTLMQPLRDTALLDERLDAIQALLQGFH-EAPVRLVLKEIS 320
Query: 83 DLERMLPSSTFLSFQGCRVPADSLTL--TPVDRIFTRMGAKDNLSGAQSTYLAELTE 137
D+ER+L G P D + L F R + +S QST L +L E
Sbjct: 321 DIERVLSRIAL----GSARPRDLVQLRQACAQIPFLRHALQPIVSQQQSTLLVQLNE 373
>gi|237747536|ref|ZP_04578016.1| DNA mismatch repair protein mutS [Oxalobacter formigenes OXCC13]
gi|229378898|gb|EEO28989.1| DNA mismatch repair protein mutS [Oxalobacter formigenes OXCC13]
Length = 892
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPAD + + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A++ SL
Sbjct: 659 VLLAYIGSFVPADQVVIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNGATENSLV 718
Query: 152 LVDEL 156
L+DE+
Sbjct: 719 LMDEI 723
Score = 40.0 bits (92), Expect = 0.29, Method: Compositional matrix adjust.
Identities = 22/77 (28%), Positives = 39/77 (50%), Gaps = 1/77 (1%)
Query: 12 VLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHIT 71
+ T+S TL +LDHC TS G R+LR + N + R I+ L + +
Sbjct: 302 IRTDSGRNESPTLFSELDHCRTSMGARLLRHWIHHASRNQSVARARHATITA-LTEACVI 360
Query: 72 EQMRAKMKDLRDLERML 88
+ +R + ++ D+ER++
Sbjct: 361 DGLRGILGNIPDIERIV 377
>gi|373108709|ref|ZP_09522991.1| DNA mismatch repair protein mutS [Myroides odoratimimus CCUG 10230]
gi|423129619|ref|ZP_17117294.1| DNA mismatch repair protein mutS [Myroides odoratimimus CCUG 12901]
gi|371646826|gb|EHO12337.1| DNA mismatch repair protein mutS [Myroides odoratimimus CCUG 10230]
gi|371648279|gb|EHO13769.1| DNA mismatch repair protein mutS [Myroides odoratimimus CCUG 12901]
Length = 865
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 50/154 (32%), Positives = 79/154 (51%), Gaps = 20/154 (12%)
Query: 22 GTLIEQLDHCVTSFGKRMLRAQLVKPLTN----LDAIKQRQDAISVLL--DQKHITEQMR 75
LI QLD C++SF ++ L V+PL + LD R I L D +IT +
Sbjct: 549 ANLIAQLD-CLSSFAQQALENNYVRPLIDDSYELDIKDGRHPVIEKQLAYDTPYITNDVY 607
Query: 76 AKMKDLRDLERMLPSST-------------FLSFQGCRVPADSLTLTPVDRIFTRMGAKD 122
K+ + + P+ + L+ G VPA + + PVD+IFTR+GA D
Sbjct: 608 LNNKEQQIIMITGPNMSGKSAILRQTALIVLLAQMGSFVPAREVRMGPVDKIFTRVGASD 667
Query: 123 NLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
N+S +ST++ E+ E+ +I+ + S SL L+DE+
Sbjct: 668 NISMGESTFMVEMNETASILNNISDRSLVLLDEI 701
Score = 42.0 bits (97), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 24/87 (27%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D + NL L NS N TL++ +D ++ G R+L+ L PL + I R + +
Sbjct: 270 MDRFTIRNLE-LYNSANLNAITLLDVIDKTLSPMGGRLLKRWLALPLKDTKKITDRHNIV 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+L + + + ++K + DLER++
Sbjct: 329 EILKENSELLTLFQTQIKKISDLERLI 355
>gi|54288192|gb|AAV31541.1| DNA mismatch repair protein [Ralstonia solanacearum]
gi|442564905|dbj|BAM76224.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
Length = 224
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ + A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAATLHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|416892361|ref|ZP_11923718.1| DNA mismatch repair protein [Aggregatibacter aphrophilus ATCC
33389]
gi|347814863|gb|EGY31509.1| DNA mismatch repair protein [Aggregatibacter aphrophilus ATCC
33389]
Length = 865
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPADS + PVDRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 632 TLMAYMGSFVPADSAVIGPVDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATDKSLV 691
Query: 152 LVDEL 156
L+DE+
Sbjct: 692 LIDEI 696
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ ++ + QRQ AI
Sbjct: 268 LDAATRRNLELTQNLAGGTENTLAAVLDKCVTPMGSRLLKRWIHQPICDVAKLTQRQQAI 327
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
V+L+Q + + ++ ++ + D+ER+L
Sbjct: 328 GVILEQDLVAD-LQPYLQQVGDMERIL 353
>gi|54288292|gb|AAV31591.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 227
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAAIIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|160872862|ref|ZP_02062994.1| DNA mismatch repair protein MutS [Rickettsiella grylli]
gi|159121661|gb|EDP46999.1| DNA mismatch repair protein MutS [Rickettsiella grylli]
Length = 864
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 49/64 (76%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L+ GC VPA S T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ +I+ +A++ SL +
Sbjct: 643 LLAMIGCFVPAKSATIGPIDRIFTRIGAADDLASGRSTFMVEMTETASILHNATEESLVI 702
Query: 153 VDEL 156
+DE+
Sbjct: 703 MDEI 706
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N TL+ LD+ T G R+L L +PL IK RQ A
Sbjct: 269 LLDAITQRNLELTLNLQGEKSNTLLSILDNTATPMGSRLLHRWLHRPLRKRLTIKSRQTA 328
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I LL + ++A +K L DLER++
Sbjct: 329 IHHLLTTESFIS-LQALLKLLGDLERII 355
>gi|313201553|ref|YP_004040211.1| DNA mismatch repair protein muts [Methylovorus sp. MP688]
gi|312440869|gb|ADQ84975.1| DNA mismatch repair protein MutS [Methylovorus sp. MP688]
Length = 859
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPA + + VDRIFTR+GA D+L+G +ST++ E+TE+ I+ +A++YSL
Sbjct: 637 VLLAHCGCFVPAKAARIGQVDRIFTRIGASDDLAGGRSTFMVEMTETANILHNATEYSLV 696
Query: 152 LVDEL 156
L+DE+
Sbjct: 697 LLDEI 701
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 2 LDSTALANLHVLTNSDNTTEG----TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQR 57
D+ + NL + D T G TL L+ C T+ G R+LR L PL + AI+ R
Sbjct: 274 FDAASRRNLEI----DQTLRGEPAPTLYSLLNTCRTAMGARLLRHWLHHPLRDHAAIQAR 329
Query: 58 QDAISVLLDQKHITEQMRAKMKDLRDLERM 87
+A++ LL Q + R + ++ D+ER+
Sbjct: 330 LEAVAALL-QGDALQAPRKLLNNIGDIERI 358
>gi|212543423|ref|XP_002151866.1| DNA mismatch repair protein Msh6, putative [Talaromyces marneffei
ATCC 18224]
gi|210066773|gb|EEA20866.1| DNA mismatch repair protein Msh6, putative [Talaromyces marneffei
ATCC 18224]
Length = 1197
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + NS D +EGTL + L+ C+T FGKRM + + PL ++D I R D
Sbjct: 605 VLDGQTLINLEIFANSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDIDKINARFD 664
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L I +Q +++ + DLER++
Sbjct: 665 AVDALNADSTIRDQFSSQLTKMPDLERLI 693
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + ++ GC +P S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A
Sbjct: 970 RMTCVAVIMAQVGCYIPCQSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEA 1029
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1030 TPKSLVILDEL 1040
>gi|15217096|gb|AAK92503.1|AF400586_1 mismatch repair protein, partial [Acinetobacter johnsonii]
Length = 837
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA S L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 604 SLLAYCGSYVPAQSAVLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 663
Query: 152 LVDEL 156
L+DE+
Sbjct: 664 LMDEV 668
Score = 38.1 bits (87), Expect = 1.2, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++PL + + R DA L+D H +R +K++
Sbjct: 257 SLFQLINDCQTAMGGRLLSRTLMQPLRDTKLLDARLDATKSLVDGYH-ESPIRLVLKEIG 315
Query: 83 DLERML 88
D+ER+L
Sbjct: 316 DIERVL 321
>gi|406719436|dbj|BAM45027.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719438|dbj|BAM45028.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719440|dbj|BAM45029.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
gi|406719446|dbj|BAM45032.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
Length = 216
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ + A+ SL L+
Sbjct: 6 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAATLHRATPNSLVLM 65
Query: 154 DEL 156
DE+
Sbjct: 66 DEI 68
>gi|383847693|ref|XP_003699487.1| PREDICTED: probable DNA mismatch repair protein Msh6-like
[Megachile rotundata]
Length = 1125
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA S LT VDRIFTR+GA D++ QST+L EL+E+ I++HA+ YSL L+DEL
Sbjct: 931 GSYVPASSCRLTLVDRIFTRLGANDDILAGQSTFLVELSETAAILQHATPYSLVLLDEL 989
Score = 64.3 bits (155), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ + NL + + G+L++ LD C T+FGKR+LR + +P + I +RQ+A
Sbjct: 536 ILDAITINNLRIFGD------GSLMKTLDRCCTAFGKRLLREWICRPSCRKNVILERQEA 589
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L+D + R+ + L DLER+L
Sbjct: 590 IQELMDHSETVQSARSMLATLPDLERLL 617
>gi|378737123|dbj|BAL63105.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
Length = 217
Score = 72.0 bits (175), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ + A+ SL L+
Sbjct: 7 LAYVGAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAATLHRATPNSLVLM 66
Query: 154 DEL 156
DE+
Sbjct: 67 DEI 69
>gi|333907024|ref|YP_004480610.1| DNA mismatch repair protein mutS [Marinomonas posidonica
IVIA-Po-181]
gi|333477030|gb|AEF53691.1| DNA mismatch repair protein mutS [Marinomonas posidonica
IVIA-Po-181]
Length = 877
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L+ GC VPA + ++ VDRIFTRMG+ D+L+G +ST++ E+TE+ I+ +A++ SL
Sbjct: 636 TLLAHTGCFVPAQAASIAVVDRIFTRMGSSDDLAGGRSTFMVEMTETANILNNATQNSLV 695
Query: 152 LVDEL 156
L+DE+
Sbjct: 696 LMDEV 700
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D+ NL + N T TL + LD C T G R+L+ L P+ +L+ I+ RQ A
Sbjct: 271 LIDAATRRNLEIDINLTGGTSNTLSQVLDQCATPMGSRLLKRWLHTPVRDLNEIQSRQSA 330
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
++ L Q + + + +K + DLER+L
Sbjct: 331 VAELKSQFYY-QPLNGSLKKVGDLERIL 357
>gi|15217094|gb|AAK92502.1|AF400585_1 mismatch repair protein, partial [Acinetobacter sp. AC423D]
Length = 837
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA S L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 604 SLLAYCGSYVPAQSAVLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 663
Query: 152 LVDEL 156
L+DE+
Sbjct: 664 LMDEV 668
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++PL + + R DA L+D H +R +K++
Sbjct: 257 SLFQLINDCQTAMGGRLLSRTLMQPLRDTKLLDARLDATKSLVDGYH-ESPVRLVLKEIG 315
Query: 83 DLERML 88
D+ER+L
Sbjct: 316 DIERVL 321
>gi|381196545|ref|ZP_09903887.1| DNA mismatch repair protein MutS [Acinetobacter lwoffii WJ10621]
Length = 877
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA S L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPAQSAVLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++PL + + R DA L+D H +R +K++
Sbjct: 297 SLFQLINDCQTAMGGRLLSRTLMQPLRDTKLLDARLDATKSLVDGYH-ESPVRLVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|358448379|ref|ZP_09158883.1| DNA mismatch repair protein MutS [Marinobacter manganoxydans
MnI7-9]
gi|357227476|gb|EHJ05937.1| DNA mismatch repair protein MutS [Marinobacter manganoxydans
MnI7-9]
Length = 876
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPA+ + PVDRIFTRMG+ D+++G +ST++ E+TE+ I+ +A+++SL
Sbjct: 634 ALLAYTGSFVPANRAVIGPVDRIFTRMGSSDDIAGGRSTFMVEMTETANILHNATEHSLV 693
Query: 152 LVDEL 156
L+DE+
Sbjct: 694 LMDEV 698
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ + NL + TN + TL +D TS G R LR L +PL +++ ++QRQ A
Sbjct: 269 ILDAASRRNLEIDTNLMGGHQYTLAWVMDRTATSMGGRELRRWLNRPLRDVEIVRQRQQA 328
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+S LLD H E + +K + D+ER+L
Sbjct: 329 VSALLDGFHY-EPVHDLLKAVGDIERVL 355
>gi|229847188|ref|ZP_04467292.1| DNA mismatch repair protein [Haemophilus influenzae 7P49H1]
gi|229809864|gb|EEP45586.1| DNA mismatch repair protein [Haemophilus influenzae 7P49H1]
Length = 861
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ AI
Sbjct: 269 LDAATRRNLELTQNLSGGTENTLASVLDKCVTPMGSRLLKRWIHQPIRDVEKLKQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|453088772|gb|EMF16812.1| DNA mismatch repair protein msh6 [Mycosphaerella populorum SO2202]
Length = 1202
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD +L NL + N+ D +TEGTL L+ C+T FGKRMLR + PL + I QR D
Sbjct: 605 VLDGQSLINLEIFANTFDGSTEGTLFTMLNRCITPFGKRMLRQWVCHPLADARKINQRLD 664
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L + ++ + + L DLER++
Sbjct: 665 AVDALNADGTVMDRFTSSLSKLPDLERLI 693
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 58/98 (59%)
Query: 59 DAISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRM 118
+ IS+ DQ IT A + RM + L+ GC VP +S LTPVDRI +R+
Sbjct: 945 NTISLGGDQASITLLTGANAAGKSTILRMTCVAVILAQIGCYVPCESARLTPVDRIMSRL 1004
Query: 119 GAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GA DN+ QST++ EL+E++ I+ A+ SL ++DEL
Sbjct: 1005 GAHDNIFAGQSTFMVELSETKKILAEATPRSLVILDEL 1042
>gi|385330787|ref|YP_005884738.1| DNA mismatch repair protein MutS [Marinobacter adhaerens HP15]
gi|311693938|gb|ADP96811.1| DNA mismatch repair protein MutS [Marinobacter adhaerens HP15]
Length = 876
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPA+ + PVDRIFTRMG+ D+++G +ST++ E+TE+ I+ +A+++SL
Sbjct: 634 ALLAYTGSFVPANRAVIGPVDRIFTRMGSSDDIAGGRSTFMVEMTETANILHNATEHSLV 693
Query: 152 LVDEL 156
L+DE+
Sbjct: 694 LMDEV 698
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ + NL + TN + TL +D TS G R LR L +PL +++ ++QRQ A
Sbjct: 269 ILDAASRRNLEIDTNLMGGHQYTLAWVMDRTATSMGGRELRRWLNRPLRDVEIVRQRQQA 328
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+S LLD H E + +K + D+ER+L
Sbjct: 329 VSALLDGFHY-EPVHDLLKAVGDIERVL 355
>gi|148826651|ref|YP_001291404.1| DNA mismatch repair protein MutS [Haemophilus influenzae PittEE]
gi|166232122|sp|A5UE20.1|MUTS_HAEIE RecName: Full=DNA mismatch repair protein MutS
gi|148716811|gb|ABQ99021.1| DNA mismatch repair protein [Haemophilus influenzae PittEE]
Length = 861
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ AI
Sbjct: 269 LDAATRRNLELTQNLSGGTENTLASVLDKCVTPMGSRLLKRWIHQPIRDVEKLKQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|262369724|ref|ZP_06063052.1| mismatch repair protein [Acinetobacter johnsonii SH046]
gi|262315792|gb|EEY96831.1| mismatch repair protein [Acinetobacter johnsonii SH046]
Length = 842
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA S L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 609 SLLAYCGSYVPAQSAVLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 668
Query: 152 LVDEL 156
L+DE+
Sbjct: 669 LMDEV 673
Score = 38.1 bits (87), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++PL + + R DA L+D H +R +K++
Sbjct: 262 SLFQLINDCQTAMGGRLLSRTLMQPLRDTKLLDARLDATKSLVDGYH-ESPVRLVLKEIG 320
Query: 83 DLERML 88
D+ER+L
Sbjct: 321 DIERVL 326
>gi|170285324|gb|AAI61405.1| LOC100145639 protein [Xenopus (Silurana) tropicalis]
Length = 978
Score = 72.0 bits (175), Expect = 8e-11, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL +L N N +TEGTL+E+LD C T FGKR+L+ L PL N +I R +
Sbjct: 712 VLDGVTLTNLEILQNGTNGSTEGTLLEKLDTCSTPFGKRLLKQWLCAPLCNPFSINDRLN 771
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L+D ++ +K L DLER+L
Sbjct: 772 AVEDLMDLPDKVSEVSDLLKKLPDLERLL 800
>gi|145637590|ref|ZP_01793246.1| DNA mismatch repair protein [Haemophilus influenzae PittHH]
gi|145269187|gb|EDK09134.1| DNA mismatch repair protein [Haemophilus influenzae PittHH]
Length = 861
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ AI
Sbjct: 269 LDAATRRNLELTQNLSGGTENTLASVLDKCVTPMGSRLLKRWIHQPIRDVEKLKQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|89892411|gb|ABD78993.1| HI0707-like protein [Haemophilus influenzae]
Length = 746
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 518 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEQSLV 577
Query: 152 LVDEL 156
L+DE+
Sbjct: 578 LIDEI 582
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ AI
Sbjct: 154 LDAATRRNLELTQNLSGGTENTLASVLDKCVTPMGSRLLKRWIHQPIRDVEKLKQRQQAI 213
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 214 AEILN-FDLVDELQPYLQLVGDMERIL 239
>gi|145639468|ref|ZP_01795073.1| DNA mismatch repair protein [Haemophilus influenzae PittII]
gi|145271515|gb|EDK11427.1| DNA mismatch repair protein [Haemophilus influenzae PittII]
Length = 861
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ +I
Sbjct: 269 LDAATRRNLELTQNLSGGTENTLASVLDKCVTPMGSRLLKRWIHQPIRDVEKLKQRQQSI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|88604449|ref|YP_504627.1| DNA mismatch repair protein MutS [Methanospirillum hungatei JF-1]
gi|88189911|gb|ABD42908.1| DNA mismatch repair protein MutS [Methanospirillum hungatei JF-1]
Length = 892
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/136 (33%), Positives = 70/136 (51%), Gaps = 13/136 (9%)
Query: 1 ILDSTALANLHVLTN-SDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL VL N D T EGTL+ +D +T G+R+LR ++ PL + + I +R D
Sbjct: 289 VLDAVTLRNLEVLQNIRDRTEEGTLVATIDLTLTPMGRRLLRKRIAAPLLDPNVINRRLD 348
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRM- 118
A+S +D+ + +R ++ DLER+ ++ G P D +TL + R+
Sbjct: 349 AVSYFIDRSAVRHDVRTRIHRFPDLERIAGRISY----GNASPRDLVTLAAANDAVKRLK 404
Query: 119 -------GAKDNLSGA 127
G D LSGA
Sbjct: 405 TLFSTEDGIPDELSGA 420
Score = 59.7 bits (143), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 43/64 (67%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L+ G VPA + VDRIFTR+GA D+L+ QST++ E+ E TI+ HA++ SL +
Sbjct: 660 ILAQMGSFVPATYARIGVVDRIFTRVGAFDDLASGQSTFMVEMMELATILNHATEKSLVI 719
Query: 153 VDEL 156
+DE+
Sbjct: 720 LDEI 723
>gi|429849425|gb|ELA24817.1| DNA mismatch repair protein msh6 [Colletotrichum gloeosporioides
Nara gc5]
Length = 1294
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L NL + N+ N EGTL L+ CVT FGKR+ R + PL ++ I +R D
Sbjct: 705 ILDGQTLINLEIFANTVNGGPEGTLFTLLNRCVTPFGKRLFRQWVCHPLCDIKRINERLD 764
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L + + EQ ++M + DLER++
Sbjct: 765 AVDMLNSDRSVREQFSSQMTKMPDLERLI 793
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S LTPVDRI +R+GA DN+ +QST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 1081 GCYVPAVSARLTPVDRIMSRLGANDNIFASQSTFFVELSETKKILSEATPRSLVILDEL 1139
>gi|68249283|ref|YP_248395.1| DNA mismatch repair protein MutS [Haemophilus influenzae 86-028NP]
gi|81336314|sp|Q4QML2.1|MUTS_HAEI8 RecName: Full=DNA mismatch repair protein MutS
gi|68057482|gb|AAX87735.1| DNA mismatch repair protein MutS [Haemophilus influenzae 86-028NP]
Length = 861
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ AI
Sbjct: 269 LDAATRRNLELTQNLSGGTENTLASVLDKCVTPMGSRLLKRWIHQPIRDVEKLKQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|45645387|gb|AAS73293.1| DNA mismatch repair protein [Haemophilus influenzae]
Length = 861
Score = 72.0 bits (175), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ +I
Sbjct: 269 LDAATRRNLELTQNLSGGTENTLASVLDKCVTPMGSRLLKRWIHQPIRDVEKLKQRQQSI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|160876376|ref|YP_001555692.1| DNA mismatch repair protein MutS [Shewanella baltica OS195]
gi|378709577|ref|YP_005274471.1| DNA mismatch repair protein MutS [Shewanella baltica OS678]
gi|189083190|sp|A9KYG1.1|MUTS_SHEB9 RecName: Full=DNA mismatch repair protein MutS
gi|160861898|gb|ABX50432.1| DNA mismatch repair protein MutS [Shewanella baltica OS195]
gi|315268566|gb|ADT95419.1| DNA mismatch repair protein MutS [Shewanella baltica OS678]
Length = 856
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ GC VPAD + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +AS SL
Sbjct: 635 TLMAHIGCFVPADRALIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNASASSLV 694
Query: 152 LVDEL 156
L+DE+
Sbjct: 695 LMDEI 699
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N + TL LD+ T G RML+ + +PL + IK RQ A
Sbjct: 270 VLDAATRRNLELTQNLAGGRDNTLAAVLDNTATPMGSRMLQRWIHQPLRDPKHIKARQQA 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
++ LLD E + ++K L D+ER++
Sbjct: 330 VTELLDTT-AHEGLHEQLKALGDIERIM 356
>gi|140090282|gb|ABO85196.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
Length = 227
Score = 72.0 bits (175), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+D IFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDSIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|417956901|ref|ZP_12599835.1| DNA mismatch repair protein mutS [Neisseria weaveri ATCC 51223]
gi|343969647|gb|EGV37857.1| DNA mismatch repair protein mutS [Neisseria weaveri ATCC 51223]
Length = 858
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD+ + P+DRIFTR+GA D+L+G +ST++ E++E+ I+ HA++ SL
Sbjct: 623 VLLAHTGAFVPADAAKIGPIDRIFTRIGASDDLAGNRSTFMVEMSETAYILHHATEQSLV 682
Query: 152 LVDEL 156
L+DE+
Sbjct: 683 LMDEV 687
Score = 42.4 bits (98), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL LD C T G R+L L PL N I+ RQ A+
Sbjct: 264 MDAATRRNLEITQTLTGKKSPTLFSVLDDCATHMGSRLLALWLHHPLRNRAHIQARQQAV 323
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
L Q H + ++ ++K++ D+ER+
Sbjct: 324 LEL--QNHYAD-LQGRLKNIADIERI 346
>gi|340966746|gb|EGS22253.1| DNA mismatch repair protein msh6-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1238
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 1023 GCFVPAESARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1081
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L NL + N+ N EGTL L+ C+T FGKR+ R + PL N+ I +R D
Sbjct: 647 ILDGQTLINLEIFANTANGGPEGTLHNLLNRCITPFGKRLFRQWVCHPLCNIQKINERLD 706
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L + I Q ++M + DLER++
Sbjct: 707 AVEMLNADQSILRQFTSQMAKMPDLERLI 735
>gi|13241560|gb|AAK16373.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241562|gb|AAK16374.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241564|gb|AAK16375.1| DNA mismatch repair protein MutS [Escherichia coli]
Length = 126
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 49/63 (77%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++AE+TE+ I+ +A++YSL L+
Sbjct: 30 MAYIGSFVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMAEMTETANILHNATEYSLVLM 89
Query: 154 DEL 156
DE+
Sbjct: 90 DEI 92
>gi|374261322|ref|ZP_09619906.1| DNA mismatch repair protein [Legionella drancourtii LLAP12]
gi|363538217|gb|EHL31627.1| DNA mismatch repair protein [Legionella drancourtii LLAP12]
Length = 845
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPA ++TL P+DRIFTR+GA D+L+ +ST++ E+TE+ I+R A++ SL
Sbjct: 627 VLLAHIGSFVPAQAVTLGPIDRIFTRIGASDDLASGRSTFMVEMTETAQILRQATQESLV 686
Query: 152 LVDEL 156
L+DE+
Sbjct: 687 LIDEI 691
Score = 36.6 bits (83), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/64 (29%), Positives = 33/64 (51%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD++ +L + N E +L+ LD + G R+L+ L +PL I+ RQ AI
Sbjct: 263 LDASTQKHLELFENVQGGHENSLLSVLDKTACTMGSRLLKRWLGRPLKQQSLIQARQQAI 322
Query: 62 SVLL 65
+ ++
Sbjct: 323 AEII 326
>gi|336314960|ref|ZP_08569874.1| DNA mismatch repair protein MutS [Rheinheimera sp. A13L]
gi|335880787|gb|EGM78672.1| DNA mismatch repair protein MutS [Rheinheimera sp. A13L]
Length = 861
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA+ L PVDRIFTR+GA D+L+ +ST++ E+TE+ TI+ HA+ SL
Sbjct: 635 VLMAYIGSFVPAERAVLGPVDRIFTRVGASDDLASGRSTFMVEMTETATILHHATAQSLV 694
Query: 152 LVDEL 156
L+DE+
Sbjct: 695 LMDEI 699
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 37/136 (27%), Positives = 63/136 (46%), Gaps = 9/136 (6%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + + TL LD C T+ G R+L+ + PL + + R A
Sbjct: 272 VLDAATRRNLELTQTLAGQFDHTLAAVLDQCQTAMGSRLLKRWIHAPLRDQALVTGRHQA 331
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGA 120
++ L Q+H + ++ K + D ER++ L+ + R P D L ++ +
Sbjct: 332 VAEL--QQH-HQNLQPLFKQVGDTERVI---ARLALRSAR-PRDFSRLRAALQLLPELSP 384
Query: 121 KDNLSGAQSTYLAELT 136
+ LS QS LA+LT
Sbjct: 385 E--LSQLQSPLLAQLT 398
>gi|269101864|ref|ZP_06154561.1| DNA mismatch repair protein MutS [Photobacterium damselae subsp.
damselae CIP 102761]
gi|268161762|gb|EEZ40258.1| DNA mismatch repair protein MutS [Photobacterium damselae subsp.
damselae CIP 102761]
Length = 898
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 49/64 (76%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L+ G VPADSL + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL L
Sbjct: 664 LLAHVGSFVPADSLKIGPLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATQHSLVL 723
Query: 153 VDEL 156
+DE+
Sbjct: 724 MDEI 727
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 42/88 (47%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N + TL LD T G R+L+ L +P+ + + R +A
Sbjct: 298 ILDAATRRNLELTQNLAGGFDNTLASVLDQTATPMGSRLLKRWLHQPIRDPKQLNGRYNA 357
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I D +E + ++ + DLER+L
Sbjct: 358 IGAFKDSGLFSE-LAGVLRHMGDLERIL 384
>gi|357404493|ref|YP_004916417.1| DNA mismatch repair protein MutS [Methylomicrobium alcaliphilum
20Z]
gi|351717158|emb|CCE22823.1| DNA mismatch repair protein MutS [Methylomicrobium alcaliphilum
20Z]
Length = 855
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 47/59 (79%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA + T+ PVD+IFTR+GA D+L+G +ST++ E++E+ I+ +A++ SL L+DE+
Sbjct: 639 GCYVPAKAATIGPVDKIFTRIGASDDLAGGRSTFMVEMSETANILHNATEQSLILMDEI 697
Score = 40.8 bits (94), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 31/107 (28%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ + NL + T+ TL LD VT+ G R LR + +PL + ++ R AI
Sbjct: 269 LDAASRRNLELDTHPTGELRYTLFGVLDKTVTAMGSRCLRRWINRPLRDQAILQNRYSAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTL 108
LL ++ + + +R ++ + D+ER+ S+ ++ + R P D + L
Sbjct: 329 ESLLSER-LLDAVRNQLNAVGDIERI---SSRIALKSAR-PRDLIVL 370
>gi|407928522|gb|EKG21378.1| hypothetical protein MPH_01370 [Macrophomina phaseolina MS6]
Length = 1185
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD +L NL + NS D T+GTL L+ C+T FGKRML+ + PL + I QR D
Sbjct: 590 VLDGQSLINLEIFANSFDGGTDGTLFSMLNRCITPFGKRMLKQWVCHPLADARKINQRLD 649
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L + ++ A + L DLER+L
Sbjct: 650 AVDALNADTTVMDRFTASLSKLPDLERLL 678
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + L+ G +P S TLTPVDRI +R+GA+DN+ AQST+ EL+E++ I+ A
Sbjct: 955 RMTCIAVILAQVGVYLPCSSATLTPVDRIMSRLGAQDNIFAAQSTFFVELSETKKILSEA 1014
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1015 TPRSLVILDEL 1025
>gi|157130502|ref|XP_001661901.1| DNA mismatch repair protein muts [Aedes aegypti]
gi|108871885|gb|EAT36110.1| AAEL011780-PA [Aedes aegypti]
Length = 1130
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G R+PA+S +T +DRIFTR+GA D++ ST+L EL E+ TI++HA++ SL L+DEL
Sbjct: 930 GSRIPAESCRMTLIDRIFTRLGANDDIMAGHSTFLVELNETSTILKHATRKSLVLLDEL 988
Score = 65.9 bits (159), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/90 (38%), Positives = 53/90 (58%), Gaps = 9/90 (10%)
Query: 1 ILDSTALANLHVLTNSDNTTEG--TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQ 58
+LDS L NL + TEG +L+ ++DHC T FGKR+L + P D I QRQ
Sbjct: 530 VLDSVTLNNLRI-------TEGEQSLVNRMDHCCTKFGKRLLHHWICSPSCERDVIVQRQ 582
Query: 59 DAISVLLDQKHITEQMRAKMKDLRDLERML 88
+A++ L++ + + +R + +L DLERML
Sbjct: 583 EAVTELIEDVSLLQDVRQILGELPDLERML 612
>gi|13241540|gb|AAK16363.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241546|gb|AAK16366.1| DNA mismatch repair protein MutS [Escherichia coli]
Length = 126
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L +ST++AE+TE+ I+ +A++YSL L
Sbjct: 29 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLESGRSTFMAEMTETANILHNATEYSLVL 88
Query: 153 VDEL 156
+DE+
Sbjct: 89 MDEI 92
>gi|348029913|ref|YP_004872599.1| DNA mismatch repair protein(MutS) [Glaciecola nitratireducens
FR1064]
gi|347947256|gb|AEP30606.1| DNA mismatch repair protein(MutS) [Glaciecola nitratireducens
FR1064]
Length = 893
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ GC VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL L
Sbjct: 643 LLAYVGCYVPAQDVKIGPIDRIFTRIGAADDLASGRSTFMVEMTETANILNNATANSLVL 702
Query: 153 VDEL 156
+DE+
Sbjct: 703 MDEI 706
Score = 39.3 bits (90), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D+ NL + ++E TL L++ T+ G R+L+ L +P+T+ + + RQ+
Sbjct: 274 LMDAATQQNLELTRTLSGSSENTLFAVLNNTSTAMGSRLLQRWLHRPITDKNKLLFRQNT 333
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I+ + Q H ++ +K + D+ER+L
Sbjct: 334 IADV--QSHNYSVLQDFLKQIGDVERIL 359
>gi|345875800|ref|ZP_08827589.1| DNA mismatch repair protein mutS [Neisseria weaveri LMG 5135]
gi|343968498|gb|EGV36726.1| DNA mismatch repair protein mutS [Neisseria weaveri LMG 5135]
Length = 856
Score = 71.6 bits (174), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD+ + P+DRIFTR+GA D+L+G +ST++ E++E+ I+ HA++ SL
Sbjct: 623 VLLAHTGAFVPADAAKIGPIDRIFTRIGASDDLAGNRSTFMVEMSETAYILHHATEQSLV 682
Query: 152 LVDEL 156
L+DE+
Sbjct: 683 LMDEV 687
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 42/86 (48%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL LD C T G R+L L PL N I+ RQ A+
Sbjct: 264 MDAATRRNLEITQTLTGKKSPTLFSVLDDCATHMGSRLLALWLHHPLRNRTHIQARQQAV 323
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
L Q H + ++ ++K++ D+ER+
Sbjct: 324 LEL--QNHYAD-LQGRLKNIADIERI 346
>gi|24374941|ref|NP_718984.1| DNA mismatch repair protein MutS [Shewanella oneidensis MR-1]
gi|44888216|sp|Q8EBR9.1|MUTS_SHEON RecName: Full=DNA mismatch repair protein MutS
gi|24349656|gb|AAN56428.1|AE015779_5 DNA mismatch repair protein MutS [Shewanella oneidensis MR-1]
Length = 856
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ GC VPA+ T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL
Sbjct: 635 TLMAHIGCFVPAERATIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATAQSLV 694
Query: 152 LVDEL 156
L+DE+
Sbjct: 695 LMDEI 699
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N + TL LD+ T+ G RML+ + +PL + I RQ A
Sbjct: 270 VLDAATRRNLELTQNLSGGRDNTLAAVLDNTATAMGSRMLQRWIHQPLRDHALILARQTA 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
++ LL+ + E + ++K L D+ER++
Sbjct: 330 VNELLETA-VHESLHEQLKALGDIERIM 356
>gi|422337326|ref|ZP_16418297.1| DNA mismatch repair protein mutS [Aggregatibacter aphrophilus
F0387]
gi|353345353|gb|EHB89648.1| DNA mismatch repair protein mutS [Aggregatibacter aphrophilus
F0387]
Length = 866
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLMAYMGSFVPADSAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATDKSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ ++ + QRQ AI
Sbjct: 269 LDAATRRNLELTQNLAGGTENTLAAVLDKCVTPMGSRLLKRWIHQPICDVAKLTQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+L+Q + + ++ ++ + D+ER+L
Sbjct: 329 GAILEQDLVAD-LQPYLQQVGDMERIL 354
>gi|242786643|ref|XP_002480846.1| DNA mismatch repair protein Msh6, putative [Talaromyces stipitatus
ATCC 10500]
gi|218720993|gb|EED20412.1| DNA mismatch repair protein Msh6, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1183
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + NS D +EGTL + L+ C+T FGKRM + + PL ++D I R D
Sbjct: 591 VLDGQTLINLEIFANSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLMDIDKINARFD 650
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L I +Q +++ + DLER++
Sbjct: 651 AVDALNADSTIRDQFSSQLTKMPDLERLI 679
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + ++ GC +P S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A
Sbjct: 956 RMTCVAVIMAQIGCYIPCQSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEA 1015
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1016 TPKSLVILDEL 1026
>gi|251793530|ref|YP_003008259.1| DNA mismatch repair protein MutS [Aggregatibacter aphrophilus
NJ8700]
gi|247534926|gb|ACS98172.1| DNA mismatch repair protein MutS [Aggregatibacter aphrophilus
NJ8700]
Length = 866
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLMAYMGSFVPADSAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATDKSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 50/87 (57%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ ++ + QRQ AI
Sbjct: 269 LDAATRRNLELTQNLAGGTENTLAAVLDKCVTPMGSRLLKRWIHQPICDVAKLTQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+L+Q + + ++ ++ + D+ER+L
Sbjct: 329 GAILEQDLVAD-LQPYLQQVGDMERIL 354
>gi|281206806|gb|EFA80990.1| Muts-like protein [Polysphondylium pallidum PN500]
Length = 1231
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S L+ VDRIFTR+GA DN+ QST++ EL E+ ++++A+K SL ++DEL
Sbjct: 1024 GCYVPAASCRLSIVDRIFTRLGANDNIMAGQSTFMLELQETSNVLKYATKRSLVIMDEL 1082
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD +L NL + N+ D +T G+L + LD C T FGKR+L+ + +PL++ + I +R D
Sbjct: 640 VLDGQSLVNLEIFANTTDGSTNGSLFKVLDRCSTPFGKRLLKQWVCRPLSSREKINERLD 699
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L + + + ++ + + DLERML
Sbjct: 700 AVQYLGENQELMSKLSTMLTRVPDLERML 728
>gi|290476556|ref|YP_003469461.1| methyl-directed mismatch repair, recognizes exocyclic adducts of
guanosine [Xenorhabdus bovienii SS-2004]
gi|289175894|emb|CBJ82697.1| methyl-directed mismatch repair, recognizes exocyclic adducts of
guanosine [Xenorhabdus bovienii SS-2004]
Length = 858
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 50/65 (76%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA+ + + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL
Sbjct: 638 TLLAYIGSFVPAEKVLIGPVDRIFTRVGASDDLASGRSTFMVEMTETANILHNATEHSLV 697
Query: 152 LVDEL 156
L+DE+
Sbjct: 698 LMDEI 702
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N TE TL LD CVT G RML+ L P+ + + ++ RQ A
Sbjct: 275 IMDAATRRNLELTQNLAGGTENTLASVLDQCVTPMGSRMLKRWLHTPIRDRNVLQNRQQA 334
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
IS L + I +++ ++ + DLER+L
Sbjct: 335 ISAL---QEIGFELQPFLRQVGDLERVL 359
>gi|145641963|ref|ZP_01797536.1| DNA mismatch repair protein [Haemophilus influenzae R3021]
gi|145273329|gb|EDK13202.1| DNA mismatch repair protein [Haemophilus influenzae 22.4-21]
Length = 672
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 444 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLV 503
Query: 152 LVDEL 156
L+DE+
Sbjct: 504 LIDEI 508
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ AI
Sbjct: 80 LDAATRRNLELTQNLSGGTENTLASVLDKCVTPMGSRLLKRWIHQPIRDVEKLKQRQQAI 139
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 140 AEILN-FDLVDELQPYLQLVGDMERIL 165
>gi|171679972|ref|XP_001904932.1| hypothetical protein [Podospora anserina S mat+]
gi|170939612|emb|CAP64839.1| unnamed protein product [Podospora anserina S mat+]
Length = 1230
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L NL + +N+ N EGTL L+ C+T FGKR+ R + PL N+ I +R D
Sbjct: 622 ILDGQTLINLEIFSNTANGGVEGTLFNLLNRCITPFGKRLFRQWVCHPLCNIQKINERLD 681
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L + K + + M + DLER++
Sbjct: 682 AVDMLSNDKSALAEFSSHMSKMPDLERLI 710
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 1015 GCYVPAVSAKLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILAEATSRSLVILDEL 1073
>gi|157374438|ref|YP_001473038.1| DNA mismatch repair protein MutS [Shewanella sediminis HAW-EB3]
gi|189083193|sp|A8FST7.1|MUTS_SHESH RecName: Full=DNA mismatch repair protein MutS
gi|157316812|gb|ABV35910.1| DNA mismatch repair protein MutS [Shewanella sediminis HAW-EB3]
Length = 859
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ GC VPA S + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL
Sbjct: 635 TLMTHIGCYVPAQSAVIGPVDRIFTRIGAADDLASGRSTFMVEMTETANILHNATTESLV 694
Query: 152 LVDEL 156
L+DE+
Sbjct: 695 LMDEI 699
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N E TL LD+ T G RML+ + +PL N I+ RQ A
Sbjct: 270 VLDAATRRNLELTVNLQGGHENTLASVLDNTATPMGSRMLQRWIHEPLRNQQQIESRQSA 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERM 87
++ +LD ++ E + ++K L D+ER+
Sbjct: 330 LTEILD-TNLFETLEPQLKALGDVERI 355
>gi|13241512|gb|AAK16349.1| DNA mismatch repair protein MutS [Shigella dysenteriae]
Length = 126
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 47/64 (73%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+ E+ I+ HA++YSL L
Sbjct: 29 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMIETANILHHATEYSLVL 88
Query: 153 VDEL 156
+DE+
Sbjct: 89 MDEI 92
>gi|406041244|ref|ZP_11048599.1| DNA mismatch repair protein MutS [Acinetobacter ursingii DSM 16037
= CIP 107286]
Length = 879
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA S L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPAQSAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATHQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
>gi|401402358|ref|XP_003881229.1| DNA mismatch repair protein mutS, related [Neospora caninum
Liverpool]
gi|325115641|emb|CBZ51196.1| DNA mismatch repair protein mutS, related [Neospora caninum
Liverpool]
Length = 1487
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/59 (57%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPADS TLTPVDRIFTR+GA+D + ST+L EL + +M + ++ SLA+VDEL
Sbjct: 1257 GCFVPADSCTLTPVDRIFTRLGAEDFILQGASTFLVELKDVSELMTYGTRRSLAVVDEL 1315
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 54/100 (54%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D+ AL L +L D + +L+ LD VT+FG R+LR +V PL N +K+R DA
Sbjct: 836 VMDANALRQLEILQTQDGDAKKSLLGYLDRTVTAFGHRLLRRWVVAPLQNPRELKRRLDA 895
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCR 100
++ LL++ +R ++ D+ER+ QG R
Sbjct: 896 VAWLLNRPESVASIRKALQACPDIERLSAKICAQGLQGER 935
>gi|417839325|ref|ZP_12485512.1| putative dna mismatch repair protein [Haemophilus haemolyticus
M19107]
gi|341953370|gb|EGT79877.1| putative dna mismatch repair protein [Haemophilus haemolyticus
M19107]
Length = 453
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 225 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLV 284
Query: 152 LVDEL 156
L+DE+
Sbjct: 285 LIDEI 289
>gi|397664263|ref|YP_006505801.1| methyl-directed mismatch repair protein [Legionella pneumophila
subsp. pneumophila]
gi|395127674|emb|CCD05873.1| methyl-directed mismatch repair protein [Legionella pneumophila
subsp. pneumophila]
Length = 846
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD + L P+DRIFTR+GA D+LS +ST++ E+TE+ I+R A+ SL
Sbjct: 627 VLLAHIGSFVPADEVKLGPLDRIFTRIGASDDLSSGRSTFMVEMTETAQILRQATSQSLV 686
Query: 152 LVDEL 156
L+DE+
Sbjct: 687 LIDEI 691
Score = 36.6 bits (83), Expect = 3.3, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD++ +L + N E L+ LD + G R+L+ L KPL I+ RQ AI
Sbjct: 263 LDASTQKHLELFENIHGGGEHCLLSILDKTACAMGSRLLKRWLGKPLKQHAIIQTRQQAI 322
Query: 62 S--VLLDQKHITEQMRAKMKDLRDLERML 88
+ L Q Q+ +K D+ER++
Sbjct: 323 KEIIFLQQDVSLHQL---VKQCADVERIV 348
>gi|423115918|ref|ZP_17103609.1| DNA mismatch repair protein mutS [Klebsiella oxytoca 10-5245]
gi|376379863|gb|EHS92613.1| DNA mismatch repair protein mutS [Klebsiella oxytoca 10-5245]
Length = 855
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPAD + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL
Sbjct: 633 ALLAYIGSYVPADKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LMDEI 697
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N + TL LD VT G RML+ L P + + +RQ
Sbjct: 270 IMDAATRRNLEITQNLAGGFDNTLASVLDCTVTPMGSRMLKRWLHMPARDTAVLVERQQT 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q+H TE ++ ++ + DLER+L
Sbjct: 330 IGAL--QEHYTE-LQPILRQVGDLERIL 354
>gi|13241602|gb|AAK16394.1| DNA mismatch repair protein MutS [Escherichia coli]
Length = 126
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L +ST++AE+TE+ I+ +A++YSL L
Sbjct: 29 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLDSGRSTFMAEMTETANILHNATEYSLVL 88
Query: 153 VDEL 156
+DE+
Sbjct: 89 MDEI 92
>gi|423109958|ref|ZP_17097653.1| DNA mismatch repair protein mutS [Klebsiella oxytoca 10-5243]
gi|376380893|gb|EHS93635.1| DNA mismatch repair protein mutS [Klebsiella oxytoca 10-5243]
Length = 853
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPAD + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL
Sbjct: 631 ALLAYIGSYVPADKVGIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 44.7 bits (104), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N + TL LD VT G RML+ L P + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGFDNTLASVLDCTVTPMGSRMLKRWLHMPARDTAVLVERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q+H TE ++ ++ + DLER+L
Sbjct: 328 IGAL--QEHYTE-LQPILRQVGDLERIL 352
>gi|359784997|ref|ZP_09288158.1| DNA mismatch repair protein MutS [Halomonas sp. GFAJ-1]
gi|359297692|gb|EHK61919.1| DNA mismatch repair protein MutS [Halomonas sp. GFAJ-1]
Length = 859
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD+ + P+DRIFTR+G+ D+L+G +ST++ E+TE+ I+ +A+++SL
Sbjct: 632 ALLAHSGSFVPADAAEIGPIDRIFTRIGSSDDLAGGRSTFMVEMTETANILHNATEHSLV 691
Query: 152 LVDEL 156
L+DE+
Sbjct: 692 LMDEI 696
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 51/89 (57%), Gaps = 3/89 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D+ + NL + N ++ TL LD C T+ G R+L+ L +PL D ++ RQ
Sbjct: 266 VIDAASRRNLEIDINLGGNSDNTLASVLDTCATAMGSRLLKRWLNRPLRQRDIVEGRQAG 325
Query: 61 ISVL-LDQKHITEQMRAKMKDLRDLERML 88
+++L +D ++ +R + D+ D+ER+L
Sbjct: 326 VALLSIDAAYMA--LRDTLSDVGDVERIL 352
>gi|226291537|gb|EEH46965.1| DNA mismatch repair protein msh6 [Paracoccidioides brasiliensis Pb18]
Length = 1207
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM ++ ++ GC VP S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A
Sbjct: 974 RMTCTAVIMAQIGCHVPCQSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEA 1033
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1034 TPRSLVILDEL 1044
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL V NS D EGTL + L+ CVT FGKRM + + PL + I R D
Sbjct: 609 VLDGQTLINLEVFANSFDGGQEGTLFQLLNRCVTPFGKRMFKQWVCHPLVDTKKINARLD 668
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L I Q +++ + DLER++
Sbjct: 669 AVDALNADNAIRNQFSSQLTKMPDLERLI 697
>gi|375134156|ref|YP_004994806.1| DNA mismatch repair protein [Acinetobacter calcoaceticus PHEA-2]
gi|325121601|gb|ADY81124.1| DNA mismatch repair protein [Acinetobacter calcoaceticus PHEA-2]
Length = 879
Score = 71.6 bits (174), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA ++ L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPAKAVKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYH-ENPVRLVLKEIG 355
Query: 83 DLERML---------PSSTFLSFQGC-RVPADSLTLTPV 111
D+ER+L P C ++PA LTPV
Sbjct: 356 DIERVLSRVALGSARPRDLVQLRHACAQIPALRTALTPV 394
>gi|293608587|ref|ZP_06690890.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|427423559|ref|ZP_18913709.1| DNA mismatch repair protein MutS [Acinetobacter baumannii WC-136]
gi|292829160|gb|EFF87522.1| conserved hypothetical protein [Acinetobacter sp. SH024]
gi|425699663|gb|EKU69270.1| DNA mismatch repair protein MutS [Acinetobacter baumannii WC-136]
Length = 879
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA ++ L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPAKAVKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 37.7 bits (86), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYH-ENPVRLVLKEIG 355
Query: 83 DLERML---------PSSTFLSFQGC-RVPADSLTLTPV 111
D+ER+L P C ++PA LTPV
Sbjct: 356 DIERVLSRVALGSARPRDLVQLRHACAQIPALRTALTPV 394
>gi|225679781|gb|EEH18065.1| DNA mismatch repair protein mutS [Paracoccidioides brasiliensis Pb03]
Length = 1256
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM ++ ++ GC VP S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A
Sbjct: 1023 RMTCTAVIMAQIGCHVPCQSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEA 1082
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1083 TPRSLVILDEL 1093
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL V NS D EGTL + L+ CVT FGKRM + + PL + I R D
Sbjct: 658 VLDGQTLINLEVFANSFDGGQEGTLFQLLNRCVTPFGKRMFKQWVCHPLVDTKKINARLD 717
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L I Q +++ + DLER++
Sbjct: 718 AVDALNADNAIRNQFSSQLTKMPDLERLI 746
>gi|54288200|gb|AAV31545.1| DNA mismatch repair protein [Ralstonia solanacearum]
Length = 230
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ VPAD+ T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVSAFVPADAATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|421857168|ref|ZP_16289522.1| DNA mismatch repair protein MutS [Acinetobacter radioresistens DSM
6976 = NBRC 102413]
gi|403187390|dbj|GAB75723.1| DNA mismatch repair protein MutS [Acinetobacter radioresistens DSM
6976 = NBRC 102413]
Length = 883
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA S L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSFVPAQSARLGPIDRIFTRIGSADDLSSGKSTFMVEMTETSQILHHATSQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 37.0 bits (84), Expect = 2.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L ++ C T+ G R+L L++P+ + ++ R DAI L+ H +R +K++
Sbjct: 297 SLFHLINECQTAMGSRLLSRTLMQPIRDTVILEARLDAIEQLVKGYH-EAPVRLVLKEIS 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|336375399|gb|EGO03735.1| hypothetical protein SERLA73DRAFT_119383 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388457|gb|EGO29601.1| hypothetical protein SERLADRAFT_365596 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1215
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD LA++ V N + T EGTL + L C+T FGKR+ R L PL N+ I R DA
Sbjct: 619 VLDGQTLAHIEVFVNDEGTDEGTLHKLLGRCITPFGKRLFRIWLCVPLRNVTDINARLDA 678
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ L+D + E K L DLER++
Sbjct: 679 VEALMDHETFEETFTDLAKGLPDLERIV 706
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 40/71 (56%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + ++ G VPA S L PVD I TRMGA DN+ ST+ EL E I+R A
Sbjct: 977 RMTATGVIMAQLGMFVPAKSARLCPVDTILTRMGAYDNMFSNASTFKVELDECCKILRDA 1036
Query: 146 SKYSLALVDEL 156
+ S ++DEL
Sbjct: 1037 TPKSFVILDEL 1047
>gi|262379625|ref|ZP_06072781.1| DNA mismatch repair protein MutS [Acinetobacter radioresistens
SH164]
gi|262299082|gb|EEY86995.1| DNA mismatch repair protein MutS [Acinetobacter radioresistens
SH164]
Length = 883
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA S L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSFVPAQSARLGPIDRIFTRIGSADDLSSGKSTFMVEMTETSQILHHATSQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L ++ C T+ G R+L L++P+ + ++ R DAI L+ H +R +K++
Sbjct: 297 SLFHLINECQTAMGSRLLSRTLMQPIRDTVILEARLDAIEQLVKGYH-EAPVRLVLKEIS 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|240950045|ref|ZP_04754351.1| DNA mismatch repair protein [Actinobacillus minor NM305]
gi|240295463|gb|EER46211.1| DNA mismatch repair protein [Actinobacillus minor NM305]
Length = 864
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 7/157 (4%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFG-KRMLRAQLVKPLTNLDAIKQRQDA 60
L + AL+ L VLTN E L + +F +R++ + + +K+ A
Sbjct: 543 LAAMALSELDVLTNLAERAE-----NLGYVKPTFSPQRLINIKGGRHPVVEQVLKEPFIA 597
Query: 61 ISVLLD-QKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMG 119
V L+ Q+H+ M R + T +++ G VPA+S + VDRIFTR+G
Sbjct: 598 NPVYLNGQRHLLVVTGPNMGGKSTYMRQIALITLMAYIGSFVPAESAEIGIVDRIFTRIG 657
Query: 120 AKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
A D+L+ +ST++ E+TE I+ A++YSL L+DE+
Sbjct: 658 ASDDLASGRSTFMVEMTEMANILHQATEYSLVLIDEI 694
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N TE TL LD CVT G R+L+ + +P+ + +++RQ+
Sbjct: 266 LLDAATRRNLELTQNLAGGTENTLAAVLDKCVTPMGSRLLKRWIHQPIRQMKKLEERQET 325
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L I + +++ ++++ D+ER+L
Sbjct: 326 IDALQKNGQI-QPLQSLLQNVGDMERIL 352
>gi|295668168|ref|XP_002794633.1| DNA mismatch repair protein msh6 [Paracoccidioides sp. 'lutzii' Pb01]
gi|226286049|gb|EEH41615.1| DNA mismatch repair protein msh6 [Paracoccidioides sp. 'lutzii' Pb01]
Length = 1200
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM ++ ++ GC VP S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A
Sbjct: 967 RMTCTAVIMAQIGCHVPCQSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEA 1026
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1027 TPRSLVILDEL 1037
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 26/42 (61%), Gaps = 1/42 (2%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLR 41
+LD L NL V NS D EGTL + L+ CVT FGKRM +
Sbjct: 658 VLDGQTLINLEVFANSFDGGQEGTLFQLLNRCVTPFGKRMFK 699
>gi|15217089|gb|AAK92499.1|AF400583_1 mismatch repair protein, partial [Acinetobacter sp. 93A2]
Length = 860
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA S L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 628 SLLAYCGSYVPAKSAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATHQSLV 687
Query: 152 LVDEL 156
L+DE+
Sbjct: 688 LMDEV 692
>gi|421465263|ref|ZP_15913951.1| DNA mismatch repair protein MutS [Acinetobacter radioresistens
WC-A-157]
gi|400204525|gb|EJO35509.1| DNA mismatch repair protein MutS [Acinetobacter radioresistens
WC-A-157]
Length = 883
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA S L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSFVPAQSARLGPIDRIFTRIGSADDLSSGKSTFMVEMTETSQILHHATSQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L ++ C T+ G R+L L++P+ + ++ R DAI L+ H +R +K++
Sbjct: 297 SLFHLINECQTAMGSRLLSRTLMQPIRDTVILEARLDAIEQLVKGYH-EAPVRLVLKEIS 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|339048494|ref|ZP_08647410.1| DNA mismatch repair protein MutS [gamma proteobacterium IMCC2047]
gi|330722299|gb|EGH00168.1| DNA mismatch repair protein MutS [gamma proteobacterium IMCC2047]
Length = 445
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA + ++ P+DRIFTRMG+ D+L+G +ST++ E+TE+ I+ +A+ SL L
Sbjct: 216 LLAYVGSYVPAQAASIGPIDRIFTRMGSSDDLAGGRSTFMVEMTETANILHNATANSLVL 275
Query: 153 VDEL 156
+DE+
Sbjct: 276 MDEV 279
>gi|416215053|ref|ZP_11623264.1| DNA mismatch repair protein MutS [Neisseria meningitidis
M01-240013]
gi|325143562|gb|EGC65883.1| DNA mismatch repair protein MutS [Neisseria meningitidis
M01-240013]
Length = 864
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPFDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|145633766|ref|ZP_01789491.1| DNA mismatch repair protein [Haemophilus influenzae 3655]
gi|144985425|gb|EDJ92252.1| DNA mismatch repair protein [Haemophilus influenzae 3655]
Length = 861
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ +I
Sbjct: 269 LDAATRRNLELTQNLAGGTENTLSSVLDKCVTPMGSRLLKRWIHQPVRDVEKLKQRQQSI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|378696905|ref|YP_005178863.1| methyl-directed mismatch repair protein [Haemophilus influenzae
10810]
gi|45645383|gb|AAS73291.1| DNA mismatch repair protein [Haemophilus influenzae]
gi|301169424|emb|CBW29024.1| methyl-directed mismatch repair protein [Haemophilus influenzae
10810]
Length = 861
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ AI
Sbjct: 269 LDAATRRNLELTQNLSGGTENTLASVLDKCVTPMGSRLLKRWIHQPIRDVEKLKQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|255319932|ref|ZP_05361132.1| DNA mismatch repair protein MutS [Acinetobacter radioresistens
SK82]
gi|255302952|gb|EET82169.1| DNA mismatch repair protein MutS [Acinetobacter radioresistens
SK82]
Length = 883
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA S L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSFVPAQSARLGPIDRIFTRIGSADDLSSGKSTFMVEMTETSQILHHATSQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 37.0 bits (84), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L ++ C T+ G R+L L++P+ + ++ R DAI L+ H +R +K++
Sbjct: 297 SLFHLINECQTAMGSRLLSRTLMQPIRDTVILEARLDAIEQLVKGYH-EAPVRLVLKEIS 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|416165547|ref|ZP_11607476.1| DNA mismatch repair protein MutS [Neisseria meningitidis N1568]
gi|421551696|ref|ZP_15997683.1| DNA mismatch repair protein MutS [Neisseria meningitidis 69166]
gi|433472312|ref|ZP_20429688.1| DNA mismatch repair protein MutS [Neisseria meningitidis 68094]
gi|433474484|ref|ZP_20431836.1| DNA mismatch repair protein MutS [Neisseria meningitidis 97021]
gi|433478730|ref|ZP_20436036.1| DNA mismatch repair protein MutS [Neisseria meningitidis 70012]
gi|433482920|ref|ZP_20440168.1| DNA mismatch repair protein MutS [Neisseria meningitidis 2006087]
gi|433485038|ref|ZP_20442250.1| DNA mismatch repair protein MutS [Neisseria meningitidis 2002038]
gi|433487165|ref|ZP_20444350.1| DNA mismatch repair protein MutS [Neisseria meningitidis 97014]
gi|433522875|ref|ZP_20479553.1| DNA mismatch repair protein MutS [Neisseria meningitidis 61103]
gi|433527174|ref|ZP_20483791.1| DNA mismatch repair protein MutS [Neisseria meningitidis 69096]
gi|433539938|ref|ZP_20496402.1| DNA mismatch repair protein MutS [Neisseria meningitidis 70030]
gi|93117341|gb|ABE99588.1| MutS [Neisseria meningitidis]
gi|93117347|gb|ABE99591.1| MutS [Neisseria meningitidis]
gi|93117349|gb|ABE99592.1| MutS [Neisseria meningitidis]
gi|325127255|gb|EGC50193.1| DNA mismatch repair protein MutS [Neisseria meningitidis N1568]
gi|402326703|gb|EJU62102.1| DNA mismatch repair protein MutS [Neisseria meningitidis 69166]
gi|432206265|gb|ELK62274.1| DNA mismatch repair protein MutS [Neisseria meningitidis 68094]
gi|432207140|gb|ELK63135.1| DNA mismatch repair protein MutS [Neisseria meningitidis 97021]
gi|432213010|gb|ELK68941.1| DNA mismatch repair protein MutS [Neisseria meningitidis 70012]
gi|432213578|gb|ELK69494.1| DNA mismatch repair protein MutS [Neisseria meningitidis 2006087]
gi|432218641|gb|ELK74495.1| DNA mismatch repair protein MutS [Neisseria meningitidis 2002038]
gi|432219810|gb|ELK75645.1| DNA mismatch repair protein MutS [Neisseria meningitidis 97014]
gi|432257027|gb|ELL12333.1| DNA mismatch repair protein MutS [Neisseria meningitidis 61103]
gi|432257991|gb|ELL13283.1| DNA mismatch repair protein MutS [Neisseria meningitidis 69096]
gi|432270983|gb|ELL26116.1| DNA mismatch repair protein MutS [Neisseria meningitidis 70030]
Length = 864
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P D+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPFDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|270684414|ref|ZP_06222805.1| DNA mismatch repair protein mutS, partial [Haemophilus influenzae
HK1212]
gi|270316249|gb|EFA28200.1| DNA mismatch repair protein mutS [Haemophilus influenzae HK1212]
Length = 413
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 313 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLV 372
Query: 152 LVDEL 156
L+DE+
Sbjct: 373 LIDEI 377
>gi|262373025|ref|ZP_06066304.1| DNA mismatch repair protein MutS [Acinetobacter junii SH205]
gi|262313050|gb|EEY94135.1| DNA mismatch repair protein MutS [Acinetobacter junii SH205]
Length = 885
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ GC VPA S L +DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGCFVPAKSAKLGSIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATSQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 37.4 bits (85), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI LL H +R +K++
Sbjct: 297 SLFQLINDCQTAMGGRLLSRTLMQPIRDTAILDARLDAIEQLLKGYH-ESPVRLVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|451852581|gb|EMD65876.1| hypothetical protein COCSADRAFT_198733 [Cochliobolus sativus
ND90Pr]
Length = 1213
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD +L NL + N+ D TEGTL L+ C+T FGKR+LR + PL + I R D
Sbjct: 621 VLDGQSLINLEIFANTFDGATEGTLFAMLNRCITPFGKRLLRQWVCHPLADAQKINARLD 680
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L I E + L DLER++
Sbjct: 681 AVDALNKDSAIMENFSGSLSKLPDLERLI 709
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + L+ GC +P S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A
Sbjct: 985 RMTCIAVILAQVGCYLPCTSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETQKILSEA 1044
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1045 TSRSLVILDEL 1055
>gi|50084669|ref|YP_046179.1| DNA mismatch repair protein MutS [Acinetobacter sp. ADP1]
gi|81695872|sp|Q6FC54.1|MUTS_ACIAD RecName: Full=DNA mismatch repair protein MutS
gi|49530645|emb|CAG68357.1| methyl-directed mismatch repair, recognize exocyclic adducts of
guanosine [Acinetobacter sp. ADP1]
Length = 881
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA S L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 649 SLLAYCGSYVPAKSAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATHQSLV 708
Query: 152 LVDEL 156
L+DE+
Sbjct: 709 LMDEV 713
>gi|417845035|ref|ZP_12491068.1| DNA mismatch repair protein mutS [Haemophilus haemolyticus M21639]
gi|341955927|gb|EGT82372.1| DNA mismatch repair protein mutS [Haemophilus haemolyticus M21639]
Length = 861
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ +I
Sbjct: 269 LDAATRRNLELTQNLAGGTENTLASVLDKCVTPMGSRLLKRWIHQPVRDVEKLKQRQQSI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|145631568|ref|ZP_01787335.1| DNA mismatch repair protein [Haemophilus influenzae R3021]
gi|144982837|gb|EDJ90359.1| DNA mismatch repair protein [Haemophilus influenzae R3021]
Length = 861
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ +I
Sbjct: 269 LDAATRRNLELTQNLAGGTENTLSSVLDKCVTPMGSRLLKRWIHQPVRDVEKLKQRQQSI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|407803020|ref|ZP_11149859.1| DNA mismatch repair protein MutS [Alcanivorax sp. W11-5]
gi|407023180|gb|EKE34928.1| DNA mismatch repair protein MutS [Alcanivorax sp. W11-5]
Length = 858
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ ++ GC VPA S L P+DRIFTR+G+ D+L+G +ST++ E+ E+ I+ HA+ SL
Sbjct: 630 SLMAHIGCGVPAASARLGPLDRIFTRIGSSDDLAGGRSTFMVEMAETANILNHATSESLV 689
Query: 152 LVDEL 156
L+DE+
Sbjct: 690 LMDEI 694
Score = 51.2 bits (121), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL ++ D TL LD VT+ G R+LR + +PL + DA+ QRQ +
Sbjct: 267 LDAATRRNLELVQTLDGRDTHTLAWVLDSTVTAMGARLLRRWINQPLRDRDALGQRQARV 326
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ L Q + E+ R + D+ D+ER+L
Sbjct: 327 A-RLRQSWLFEEQRRVLADIGDMERIL 352
>gi|260582960|ref|ZP_05850743.1| DNA mismatch repair protein MutS [Haemophilus influenzae NT127]
gi|260093944|gb|EEW77849.1| DNA mismatch repair protein MutS [Haemophilus influenzae NT127]
Length = 861
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ +I
Sbjct: 269 LDAATRRNLELTQNLSGGTENTLASVLDKCVTPMGSRLLKRWIHQPIRDVEKLKQRQQSI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQTYLQLVGDMERIL 354
>gi|260581476|ref|ZP_05849287.1| DNA mismatch repair protein MutS [Haemophilus influenzae RdAW]
gi|260091877|gb|EEW75829.1| DNA mismatch repair protein MutS [Haemophilus influenzae RdAW]
Length = 861
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ +I
Sbjct: 269 LDAATRRNLELTQNLAGGTENTLASVLDKCVTPMGSRLLKRWIHQPVRDVEKLKQRQQSI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|157961022|ref|YP_001501056.1| DNA mismatch repair protein MutS [Shewanella pealeana ATCC 700345]
gi|189083192|sp|A8H1T4.1|MUTS_SHEPA RecName: Full=DNA mismatch repair protein MutS
gi|157846022|gb|ABV86521.1| DNA mismatch repair protein MutS [Shewanella pealeana ATCC 700345]
Length = 859
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ GC VPA+ + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL
Sbjct: 635 TLMAHIGCYVPAEQAVIGPVDRIFTRIGASDDLASGRSTFMVEMTETANILHNATPNSLV 694
Query: 152 LVDEL 156
L+DE+
Sbjct: 695 LMDEI 699
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N E TL LD+ VT G RML+ + +PL + D I+ RQ +
Sbjct: 270 VLDAATRRNLELTVNLQGGRENTLASVLDNTVTPMGSRMLQRWIHQPLRDHDIIRARQAS 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERM 87
I+ L+ E + +K L D+ER+
Sbjct: 330 IAELMMTGDF-ETLSEDLKALGDVERI 355
>gi|309751693|gb|ADO81677.1| DNA mismatch repair protein MutS [Haemophilus influenzae R2866]
Length = 861
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ +I
Sbjct: 269 LDAATRRNLELTQNLAGGTENTLASVLDKCVTPMGSRLLKRWIHQPIRDVEKLKQRQQSI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQTYLQLVGDMERIL 354
>gi|392574726|gb|EIW67861.1| hypothetical protein TREMEDRAFT_40008 [Tremella mesenterica DSM
1558]
Length = 959
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 46/71 (64%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM S+ ++ GC VP+ S TL+P+DRI TRMGA DN+ + STY EL E I+R A
Sbjct: 726 RMTASAVIMAQLGCYVPSASATLSPIDRIQTRMGAYDNMFASASTYKVELDECSKILREA 785
Query: 146 SKYSLALVDEL 156
SL ++DEL
Sbjct: 786 GPKSLVILDEL 796
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD +L ++ +L N++ EGTL+ L +CVT GKR+ R + PL + AI R DA
Sbjct: 357 ILDGQSLGHMEILINNEGGHEGTLLSLLQNCVTPSGKRLFRMWITAPLCEVRAINDRLDA 416
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ ++ + K+L DLER++
Sbjct: 417 VDDIMHHPDFAGMFTSSFKNLPDLERLV 444
>gi|329122519|ref|ZP_08251104.1| DNA mismatch repair protein MutS [Haemophilus aegyptius ATCC 11116]
gi|327473209|gb|EGF18631.1| DNA mismatch repair protein MutS [Haemophilus aegyptius ATCC 11116]
Length = 861
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD NL + N TE TL LD CVT G R+L+ + +P+ +++ ++QRQ AI
Sbjct: 269 LDVATRRNLELTQNLAGGTENTLASVLDKCVTPMGSRLLKRWIHQPIRDVEKLEQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|237747449|ref|ZP_04577929.1| DNA mismatch repair protein mutS [Oxalobacter formigenes HOxBLS]
gi|229378800|gb|EEO28891.1| DNA mismatch repair protein mutS [Oxalobacter formigenes HOxBLS]
Length = 892
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPAD + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A++ SL
Sbjct: 658 VLLAYLGSFVPADQAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNGATEQSLV 717
Query: 152 LVDEL 156
L+DE+
Sbjct: 718 LMDEI 722
Score = 40.8 bits (94), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 23/77 (29%), Positives = 41/77 (53%), Gaps = 1/77 (1%)
Query: 12 VLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHIT 71
+ ++S + TL+ +LDHC T+ G R+LR L + + R I+ LLD +
Sbjct: 301 IRSDSAHHQSPTLLSELDHCKTAMGSRLLRHWLHHACRDQTVARARHATITALLD-ACVM 359
Query: 72 EQMRAKMKDLRDLERML 88
E +R + + D+ER++
Sbjct: 360 EGLRNTLASVPDIERIV 376
>gi|45645393|gb|AAS73296.1| DNA mismatch repair protein [Haemophilus influenzae]
Length = 861
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ +I
Sbjct: 269 LDAATRRNLELTQNLAGGTENTLSSVLDKCVTPMGSRLLKRWIHQPVRDVEKLKQRQQSI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|15217083|gb|AAK92494.1|AF400582_3 mismatch repair protein [Acinetobacter sp. ADP1]
Length = 881
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA S L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 649 SLLAYCGSYVPAKSAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATHQSLV 708
Query: 152 LVDEL 156
L+DE+
Sbjct: 709 LMDEV 713
>gi|113969468|ref|YP_733261.1| DNA mismatch repair protein MutS [Shewanella sp. MR-4]
gi|122944021|sp|Q0HL63.1|MUTS_SHESM RecName: Full=DNA mismatch repair protein MutS
gi|113884152|gb|ABI38204.1| DNA mismatch repair protein MutS [Shewanella sp. MR-4]
Length = 861
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ GC VPAD + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL
Sbjct: 635 TLMAHIGCFVPADRAIIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATAQSLV 694
Query: 152 LVDEL 156
L+DE+
Sbjct: 695 LMDEI 699
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N + TL LD+ T+ G RML+ + +PL + I RQ A
Sbjct: 270 VLDAATRRNLELTQNLSGGRDNTLAAVLDNTATAMGSRMLQRWIHQPLRDHAQIFARQTA 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
++ LL+ E + ++K L D+ER++
Sbjct: 330 VNELLETT-AHESLHEQLKALGDIERIM 356
>gi|419838662|ref|ZP_14362085.1| DNA mismatch repair protein MutS [Haemophilus haemolyticus HK386]
gi|386910252|gb|EIJ74911.1| DNA mismatch repair protein MutS [Haemophilus haemolyticus HK386]
Length = 861
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ AI
Sbjct: 269 LDAATRRNLELTQNLAGGTENTLASVLDKCVTPMGSRLLKRWIHQPIRDVEKLKQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|197335682|ref|YP_002155290.1| DNA mismatch repair protein MutS [Vibrio fischeri MJ11]
gi|238690254|sp|B5FAC8.1|MUTS_VIBFM RecName: Full=DNA mismatch repair protein MutS
gi|197317172|gb|ACH66619.1| DNA mismatch repair protein MutS [Vibrio fischeri MJ11]
Length = 854
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 46/59 (77%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPADS + +DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+K+SL L+DE+
Sbjct: 638 GCYVPADSAEIGTLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATKHSLVLMDEI 696
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N TL E LDH T+ G R+L+ L +P+ D + QR DA
Sbjct: 267 ILDAATRRNLEITQNLAGGFNHTLAEILDHTSTAMGSRLLKRWLHQPVRTHDVLNQRLDA 326
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L + + + ++K++ D+ER+L
Sbjct: 327 IGE-LKESGLFADIAPQLKNIGDVERIL 353
>gi|149369766|ref|ZP_01889618.1| DNA mismatch repair protein [unidentified eubacterium SCB49]
gi|149357193|gb|EDM45748.1| DNA mismatch repair protein [unidentified eubacterium SCB49]
Length = 900
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 54/156 (34%), Positives = 81/156 (51%), Gaps = 28/156 (17%)
Query: 24 LIEQLDHCVTSFGKRMLRAQLVKPL----TNLDAIKQRQDAIS-------------VLLD 66
LI +LD C+ SF + A V+PL T+LD + R I V LD
Sbjct: 575 LIAELD-CLGSFATQAADANYVRPLFDETTDLDIKEGRHPVIEKQLPPDAPFISNDVFLD 633
Query: 67 QKH-----IT-EQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGA 120
++H IT M K LR ++ L+ G VPA +L + VD+IFTR+GA
Sbjct: 634 REHQQIIMITGPNMSGKSAILRQTALIV----LLAQMGSFVPAGALRMGVVDKIFTRVGA 689
Query: 121 KDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
DN+S +ST++ E+ E+ +I+ + S+ SL L+DE+
Sbjct: 690 SDNISMGESTFMVEMNETASILNNISERSLVLLDEI 725
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D + NL L +S N TL++ +D ++ G RML+ + PL N++ I +R + +
Sbjct: 294 MDRFTIRNLE-LYHSSNQNAVTLLDVIDKTISPMGGRMLKRWMALPLKNVETITRRHEVV 352
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
S LL + + ++++ +K + DLER++
Sbjct: 353 SYLLQENQVLDKIKTNIKRIGDLERLI 379
>gi|117919574|ref|YP_868766.1| DNA mismatch repair protein MutS [Shewanella sp. ANA-3]
gi|166232138|sp|A0KU91.1|MUTS_SHESA RecName: Full=DNA mismatch repair protein MutS
gi|117611906|gb|ABK47360.1| DNA mismatch repair protein MutS [Shewanella sp. ANA-3]
Length = 861
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ GC VPAD + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL
Sbjct: 635 TLMAHIGCFVPADRAIIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATAQSLV 694
Query: 152 LVDEL 156
L+DE+
Sbjct: 695 LMDEI 699
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N + TL LD+ T+ G RML+ + +PL + I RQ A
Sbjct: 270 VLDAATRRNLELTQNLSGGRDNTLAAVLDNTATAMGSRMLQRWIHQPLRDHAQIFARQTA 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
++ LL+ E + ++K L D+ER++
Sbjct: 330 VNELLETT-AHESLHDQLKALGDIERIM 356
>gi|417843645|ref|ZP_12489715.1| DNA mismatch repair protein mutS [Haemophilus haemolyticus M21127]
gi|341949004|gb|EGT75617.1| DNA mismatch repair protein mutS [Haemophilus haemolyticus M21127]
Length = 861
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ +I
Sbjct: 269 LDAATRRNLELTQNLAGGTENTLASVLDKCVTPMGSRLLKRWIHQPVRDVEKLKQRQQSI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|319775449|ref|YP_004137937.1| DNA mismatch repair protein MutS [Haemophilus influenzae F3047]
gi|317450040|emb|CBY86254.1| DNA mismatch repair protein MutS [Haemophilus influenzae F3047]
Length = 861
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ AI
Sbjct: 269 LDVATRRNLELTQNLAGGTENTLASVLDKCVTPMGSRLLKRWIHQPVRDVEKLKQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|16272647|ref|NP_438865.1| DNA mismatch repair protein MutS [Haemophilus influenzae Rd KW20]
gi|1171081|sp|P44834.1|MUTS_HAEIN RecName: Full=DNA mismatch repair protein MutS
gi|1573708|gb|AAC22364.1| DNA mismatch repair protein (mutS) [Haemophilus influenzae Rd KW20]
Length = 861
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ +I
Sbjct: 269 LDAATRRNLELTQNLAGGTENTLASVLDKCVTPMGSRLLKRWIHQPVRDVEKLKQRQQSI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|342904754|ref|ZP_08726552.1| DNA mismatch repair protein mutS [Haemophilus haemolyticus M21621]
gi|341952631|gb|EGT79154.1| DNA mismatch repair protein mutS [Haemophilus haemolyticus M21621]
Length = 861
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ AI
Sbjct: 269 LDAATRRNLELTQNLAGGTENTLASVLDKCVTPMGSRLLKRWIHQPVRDVEKLKQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ I E ++ ++ + D+ER+L
Sbjct: 329 AEILNFDLIDE-LQPYLQLVGDMERIL 354
>gi|319897854|ref|YP_004136051.1| DNA mismatch repair protein MutS [Haemophilus influenzae F3031]
gi|317433360|emb|CBY81740.1| DNA mismatch repair protein MutS [Haemophilus influenzae F3031]
Length = 861
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD NL + N TE TL LD CVT G R+L+ + +P+ +++ ++QRQ AI
Sbjct: 269 LDVATRRNLELTQNLAGGTENTLASVLDKCVTPMGSRLLKRWIHQPIRDVEKLEQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|393775423|ref|ZP_10363736.1| DNA mismatch repair protein MutS [Ralstonia sp. PBA]
gi|392717473|gb|EIZ05034.1| DNA mismatch repair protein MutS [Ralstonia sp. PBA]
Length = 856
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPA T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ +I+ +A+ SL
Sbjct: 622 VLLAYVGAFVPAAHATIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAASILHNATPNSLV 681
Query: 152 LVDEL 156
L+DE+
Sbjct: 682 LMDEI 686
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 32/94 (34%), Positives = 45/94 (47%), Gaps = 2/94 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + T TL LD C TS G R+LR L PL + + RQ AI
Sbjct: 260 LDTATRRNLELTETLRGTESPTLFSLLDTCATSMGSRLLRHWLHHPLRDRGTPQMRQHAI 319
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLS 95
+ LL Q + ++A ++ D+ER+ LS
Sbjct: 320 ATLLTQD--WQSIQAVLRQTADIERITARLALLS 351
>gi|423685247|ref|ZP_17660055.1| DNA mismatch repair protein MutS [Vibrio fischeri SR5]
gi|371495748|gb|EHN71343.1| DNA mismatch repair protein MutS [Vibrio fischeri SR5]
Length = 854
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 46/59 (77%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPADS + +DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+K+SL L+DE+
Sbjct: 638 GCYVPADSAEIGTLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATKHSLVLMDEI 696
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N TL E LDH T+ G R+L+ L +P+ D + QR DA
Sbjct: 267 ILDAATRRNLEITQNLAGGFNHTLAEILDHTSTAMGSRLLKRWLHQPVRTHDVLNQRLDA 326
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L + + M ++K++ D+ER+L
Sbjct: 327 IGE-LKESGLFADMAPQLKNIGDVERIL 353
>gi|257465144|ref|ZP_05629515.1| DNA mismatch repair protein MutS [Actinobacillus minor 202]
gi|257450804|gb|EEV24847.1| DNA mismatch repair protein MutS [Actinobacillus minor 202]
Length = 864
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 82/157 (52%), Gaps = 7/157 (4%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFG-KRMLRAQLVKPLTNLDAIKQRQDA 60
L + AL+ L VLTN E L + +F +R++ + + +K+ A
Sbjct: 543 LAAMALSELDVLTNLAERAE-----NLGYVKPTFSPQRIINIKGGRHPVVEQVLKEPFIA 597
Query: 61 ISVLLD-QKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMG 119
V L+ Q+H+ M R + T +++ G VPA+S + VDRIFTR+G
Sbjct: 598 NPVYLNAQRHLLVVTGPNMGGKSTYMRQIALITLMAYIGSFVPAESAEIGIVDRIFTRIG 657
Query: 120 AKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
A D+L+ +ST++ E+TE I+ A++YSL L+DE+
Sbjct: 658 ASDDLASGRSTFMVEMTEMANILHQATEYSLVLIDEI 694
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N TE TL LD CVT G R+L+ + +P+ + +++RQ+
Sbjct: 266 LLDAATRRNLELTQNLAGGTENTLAAVLDKCVTPMGSRLLKRWIHQPIRQMKKLEERQET 325
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L I + +++ ++++ D+ER+L
Sbjct: 326 IDALQKNGQI-QPLQSLLQNVGDMERIL 352
>gi|373467711|ref|ZP_09559004.1| DNA mismatch repair protein MutS [Haemophilus sp. oral taxon 851
str. F0397]
gi|371758053|gb|EHO46830.1| DNA mismatch repair protein MutS [Haemophilus sp. oral taxon 851
str. F0397]
Length = 861
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ N++ +KQRQ AI
Sbjct: 269 LDAATRRNLELTQNLAGGTENTLASVLDKCVTPMGSRLLKRWIHQPIRNVEKLKQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|365971842|ref|YP_004953403.1| DNA mismatch repair protein mutS [Enterobacter cloacae EcWSU1]
gi|365750755|gb|AEW74982.1| DNA mismatch repair protein mutS [Enterobacter cloacae EcWSU1]
Length = 853
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LLAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEV 695
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + D + RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGVENTLASVLDSTVTPMGSRMLKRWLHMPIRDTDTLTCRQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I+ L D+ +++ ++ + DLER+L
Sbjct: 328 IAALQDR---YSELQPVLRQVGDLERIL 352
>gi|417840683|ref|ZP_12486792.1| DNA mismatch repair protein mutS [Haemophilus haemolyticus M19501]
gi|341950871|gb|EGT77453.1| DNA mismatch repair protein mutS [Haemophilus haemolyticus M19501]
Length = 861
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ AI
Sbjct: 269 LDAATRRNLELTQNLAGGTENTLSFVLDKCVTPMGSRLLKRWIHQPIRDVEKLKQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|443734707|gb|ELU18588.1| hypothetical protein CAPTEDRAFT_139957, partial [Capitella teleta]
Length = 1270
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+ L+ VDR+FTR+GA D + +ST+ EL+E+ +I++HAS +SL L+DEL
Sbjct: 1058 GCYVPAEKCALSVVDRVFTRLGASDRIMAGESTFFVELSETSSILQHASAHSLVLLDEL 1116
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 48/88 (54%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD L NL +L N + TEGTL++ L+ C T FGKR+ + L P I R DA
Sbjct: 642 VLDGVTLNNLEILQNGEGGTEGTLLDHLNRCSTPFGKRLFQQWLCAPSCQSSTINDRLDA 701
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ L+ + + + ++ L DLER+L
Sbjct: 702 VEDLMALPDLAAEAQDFLRKLPDLERLL 729
>gi|432423035|ref|ZP_19665577.1| DNA mismatch repair protein mutS [Escherichia coli KTE178]
gi|430943308|gb|ELC63426.1| DNA mismatch repair protein mutS [Escherichia coli KTE178]
Length = 853
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 49/64 (76%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ +I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETASILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|365176851|emb|CCC72221.1| DNA mismatch repair protein, partial [Haemophilus influenzae]
Length = 743
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 597 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLV 656
Query: 152 LVDEL 156
L+DE+
Sbjct: 657 LIDEI 661
Score = 53.9 bits (128), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ ++QRQ AI
Sbjct: 233 LDAATRRNLELTQNLAGGTENTLASVLDKCVTPMGSRLLKRWIHQPIRDVEKLRQRQQAI 292
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 293 AEILN-FDLVDELQPYLQLVGDMERIL 318
>gi|45645389|gb|AAS73294.1| DNA mismatch repair protein [Haemophilus influenzae]
Length = 861
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATAQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ AI
Sbjct: 269 LDAATRRNLELTQNLSGGTENTLASVLDKCVTPMGSRLLKRWIHQPIRDVEKLKQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|325188354|emb|CCA22891.1| PREDICTED: similar to G/T mismatch binding protein p [Albugo
laibachii Nc14]
Length = 1191
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA + ++P DRIFTR+GA DNL QST EL E+ TI+ H++++SL ++DEL
Sbjct: 977 GCFVPATNCRMSPFDRIFTRIGATDNLLAGQSTLYVELAETATILNHSTQHSLVILDEL 1035
Score = 66.6 bits (161), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNTT-EGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LDS L+NL +L N+ N G+LI LD TSFGKR+ + +VKPL + I R D
Sbjct: 556 VLDSQTLSNLEILRNNRNGKRNGSLINILDKTATSFGKRLFQEWVVKPLCQVADITDRLD 615
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L+ Q+R K L DLER+L
Sbjct: 616 AVQELMANMETVTQIRNCFKKLPDLERVL 644
>gi|238758208|ref|ZP_04619387.1| DNA mismatch repair protein mutS [Yersinia aldovae ATCC 35236]
gi|238703538|gb|EEP96076.1| DNA mismatch repair protein mutS [Yersinia aldovae ATCC 35236]
Length = 221
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L+ G VPAD T+ PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL L
Sbjct: 2 LLAHMGSYVPADQATIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLVL 61
Query: 153 VDEL 156
+DE+
Sbjct: 62 MDEI 65
>gi|172087668|ref|YP_203917.2| DNA mismatch repair protein MutS [Vibrio fischeri ES114]
gi|110826510|sp|Q5E7G7.2|MUTS_VIBF1 RecName: Full=DNA mismatch repair protein MutS
gi|171902263|gb|AAW85029.2| methyl-directed mismatch repair protein [Vibrio fischeri ES114]
Length = 854
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 46/59 (77%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPADS + +DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+K+SL L+DE+
Sbjct: 638 GCYVPADSAEIGTLDRIFTRIGASDDLASGRSTFMVEMTETANILHNATKHSLVLMDEI 696
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N TL E LDH T+ G R+L+ L +P+ D + QR DA
Sbjct: 267 ILDAATRRNLEITQNLAGGFNHTLAEILDHTSTAMGSRLLKRWLHQPVRTHDVLNQRLDA 326
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L + + M ++K++ D+ER+L
Sbjct: 327 IGE-LKESGLFADMAPQLKNIGDVERIL 353
>gi|54294692|ref|YP_127107.1| DNA mismatch repair protein MutS [Legionella pneumophila str. Lens]
gi|81679202|sp|Q5WVP6.1|MUTS_LEGPL RecName: Full=DNA mismatch repair protein MutS
gi|53754524|emb|CAH16008.1| DNA mismatch repair protein MutS [Legionella pneumophila str. Lens]
Length = 846
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD + L P+DRIFTR+GA D+LS +ST++ E+TE+ I+R A+ SL
Sbjct: 627 VLLAHIGSFVPADEVRLGPLDRIFTRIGASDDLSSGRSTFMVEMTETAQILRQATSQSLV 686
Query: 152 LVDEL 156
L+DE+
Sbjct: 687 LIDEI 691
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 42/89 (47%), Gaps = 5/89 (5%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD++ +L + N E L+ LD + G R+L+ L KPL I+ RQ AI
Sbjct: 263 LDASTQRHLELFENIHGGGEHCLLSILDKTACAMGSRLLKRWLGKPLKQHAIIQTRQQAI 322
Query: 62 S--VLLDQKHITEQMRAKMKDLRDLERML 88
+ L Q Q+ +K D+ER++
Sbjct: 323 KEIIFLQQDVSLHQL---IKQCADVERIV 348
>gi|307172014|gb|EFN63608.1| Probable DNA mismatch repair protein Msh6 [Camponotus floridanus]
Length = 1117
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA S +T VDRIFTR+GA D++ QST+L EL E+ T+++HA+ YSL L+DEL
Sbjct: 923 GSYVPASSCCITLVDRIFTRLGANDDILTGQSTFLVELNETATMLQHATPYSLVLLDEL 981
Score = 62.4 bits (150), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 6/88 (6%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D+ + NL + E +L LDHC T+FGKR+LR + +P D I +RQ A
Sbjct: 528 VIDAVTIKNLRIFG------ENSLNSVLDHCCTAFGKRLLREWICRPSCRKDIIIKRQKA 581
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ L+D+ + + RA + L DLER+L
Sbjct: 582 VQELVDRIDMIQSARAILSTLPDLERLL 609
>gi|451997168|gb|EMD89633.1| hypothetical protein COCHEDRAFT_1194981 [Cochliobolus
heterostrophus C5]
Length = 1213
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD +L NL + N+ D TEGTL L+ C+T FGKR+LR + PL + I R D
Sbjct: 621 VLDGQSLINLEIFANTFDGATEGTLFAMLNRCITPFGKRLLRQWVCHPLADAQKINARLD 680
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L I E + L DLER++
Sbjct: 681 AVDALNKDSAIMENFSGSLSKLPDLERLI 709
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + L+ GC +P S LTPVDRI +R+GA DN+ AQST+ E++E++ I+ A
Sbjct: 985 RMTCIAVILAQVGCYLPCTSARLTPVDRIMSRLGANDNIFAAQSTFFVEMSETQKILSEA 1044
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1045 TSRSLVILDEL 1055
>gi|304310611|ref|YP_003810209.1| DNA mismatch repair protein MutS [gamma proteobacterium HdN1]
gi|301796344|emb|CBL44552.1| DNA mismatch repair protein MutS [gamma proteobacterium HdN1]
Length = 869
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 49/63 (77%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPA+ +T+ P+DRIFTR+G+ D+L+G +ST++ E+TE+ I+ +A+ SL L+
Sbjct: 634 LAYIGSFVPAEQMTVGPIDRIFTRIGSSDDLAGGRSTFMVEMTETANILHNATHQSLVLM 693
Query: 154 DEL 156
DE+
Sbjct: 694 DEI 696
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD++ NL ++ N TL +D T+ G R+LR L +PL + + +RQ A
Sbjct: 267 ILDASTRRNLELVENLSGGEIHTLAWVMDRARTAMGSRLLRRWLNRPLRHRSTLIERQGA 326
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I LL++ + E+++ + + D+ER+L
Sbjct: 327 IHALLNE-YAFERIQEPLHSIGDIERIL 353
>gi|300724639|ref|YP_003713964.1| methyl-directed mismatch repair protein [Xenorhabdus nematophila
ATCC 19061]
gi|297631181|emb|CBJ91874.1| methyl-directed mismatch repair, recognizes exocyclic adducts of
guanosine [Xenorhabdus nematophila ATCC 19061]
Length = 862
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA+ + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL
Sbjct: 640 TLLAYIGSFVPAEKAIIGPVDRIFTRVGASDDLASGRSTFMVEMTETANILHNATEHSLV 699
Query: 152 LVDEL 156
L+DE+
Sbjct: 700 LMDEI 704
Score = 58.9 bits (141), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD CVT G RML+ L P+ N D ++ RQ A
Sbjct: 277 IMDAATRRNLELTQNLSGGIENTLASVLDQCVTPMGSRMLKRWLHTPIRNQDVLENRQQA 336
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
IS L + I +++ ++ + DLER+L
Sbjct: 337 ISAL---QEIGYELQPFLRQVGDLERVL 361
>gi|258642979|gb|ACV86053.1| methyl-directed mismatch repair protein [Shigella flexneri]
gi|258642981|gb|ACV86054.1| methyl-directed mismatch repair protein [Shigella flexneri]
gi|294856327|gb|ADF45101.1| methyl-directed mismatch repair protein [Escherichia sp. B827]
gi|294856331|gb|ADF45103.1| methyl-directed mismatch repair protein [Escherichia sp. E807]
gi|294856333|gb|ADF45104.1| methyl-directed mismatch repair protein [Escherichia sp. H442]
gi|294856335|gb|ADF45105.1| methyl-directed mismatch repair protein [Escherichia sp. M863]
gi|294856337|gb|ADF45106.1| methyl-directed mismatch repair protein [Escherichia sp. TW10509]
gi|294856339|gb|ADF45107.1| methyl-directed mismatch repair protein [Escherichia sp. TW11930]
gi|294856341|gb|ADF45108.1| methyl-directed mismatch repair protein [Escherichia sp. TW11966]
gi|294856345|gb|ADF45110.1| methyl-directed mismatch repair protein [Escherichia sp. TW09231]
gi|294856347|gb|ADF45111.1| methyl-directed mismatch repair protein [Escherichia sp. TW09276]
gi|294856349|gb|ADF45112.1| methyl-directed mismatch repair protein [Escherichia sp. TW09254]
gi|294856351|gb|ADF45113.1| methyl-directed mismatch repair protein [Escherichia sp. TW09266]
gi|294856353|gb|ADF45114.1| methyl-directed mismatch repair protein [Escherichia sp. TA04]
gi|294856355|gb|ADF45115.1| methyl-directed mismatch repair protein [Escherichia sp. B685]
gi|294856357|gb|ADF45116.1| methyl-directed mismatch repair protein [Escherichia sp. TW14182]
gi|294856359|gb|ADF45117.1| methyl-directed mismatch repair protein [Escherichia albertii
TW11588]
gi|294856361|gb|ADF45118.1| methyl-directed mismatch repair protein [Escherichia sp. H605]
gi|294856363|gb|ADF45119.1| methyl-directed mismatch repair protein [Escherichia sp. B49]
gi|294856415|gb|ADF45145.1| methyl-directed mismatch repair protein [Escherichia coli]
gi|294856417|gb|ADF45146.1| methyl-directed mismatch repair protein [Escherichia coli]
gi|294856419|gb|ADF45147.1| methyl-directed mismatch repair protein [Escherichia fergusonii]
gi|294856421|gb|ADF45148.1| methyl-directed mismatch repair protein [Escherichia fergusonii]
gi|294856423|gb|ADF45149.1| methyl-directed mismatch repair protein [Escherichia fergusonii]
Length = 169
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 55 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 114
Query: 153 VDEL 156
+DE+
Sbjct: 115 MDEI 118
>gi|168986225|dbj|BAG11794.1| methyl-directed mismatch repair protein [Escherichia coli O55:H7]
gi|168986227|dbj|BAG11795.1| methyl-directed mismatch repair protein [Escherichia coli O55:H7]
gi|168986229|dbj|BAG11796.1| methyl-directed mismatch repair protein [Escherichia coli O55:H7]
gi|168986231|dbj|BAG11797.1| methyl-directed mismatch repair protein [Escherichia coli O55:H7]
gi|168986233|dbj|BAG11798.1| methyl-directed mismatch repair protein [Escherichia coli O55:H7]
gi|168986235|dbj|BAG11799.1| methyl-directed mismatch repair protein [Escherichia coli O55:H7]
gi|168986237|dbj|BAG11800.1| methyl-directed mismatch repair protein [Escherichia coli O55:H6]
gi|168986239|dbj|BAG11801.1| methyl-directed mismatch repair protein [Escherichia coli O55:H6]
gi|168986241|dbj|BAG11802.1| methyl-directed mismatch repair protein [Escherichia coli O55:H6]
Length = 169
Score = 71.2 bits (173), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 55 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 114
Query: 153 VDEL 156
+DE+
Sbjct: 115 MDEI 118
>gi|359499688|gb|AEV53240.1| methyl-directed DNA mismatch repair protein, partial [Ralstonia
pickettii]
Length = 217
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 47/63 (74%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPA++ + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPAEAAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|300718092|ref|YP_003742895.1| DNA mismatch repair protein [Erwinia billingiae Eb661]
gi|299063928|emb|CAX61048.1| DNA mismatch repair protein [Erwinia billingiae Eb661]
Length = 853
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA+ + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL
Sbjct: 633 TLLAYIGSYVPAEQAVIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LMDEI 697
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + ++ RQ +
Sbjct: 270 IMDAATRRNLEITQNLAGGIENTLAAVLDKTVTPMGSRMLKRWLHMPVREIKTLENRQQS 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T ++ ++ + DLER+L
Sbjct: 330 IGALQD---FTAELSPLLRQVGDLERIL 354
>gi|145635559|ref|ZP_01791258.1| DNA mismatch repair protein [Haemophilus influenzae PittAA]
gi|145267222|gb|EDK07227.1| DNA mismatch repair protein [Haemophilus influenzae PittAA]
Length = 861
Score = 70.9 bits (172), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATTQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ +I
Sbjct: 269 LDAATRRNLELTQNLAGGTENTLSSVLDKCVTPMGSRLLKRWIHQPVRDVEKLKQRQQSI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|227326559|ref|ZP_03830583.1| DNA mismatch repair protein [Pectobacterium carotovorum subsp.
carotovorum WPP14]
Length = 840
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPAD + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL L+DE+
Sbjct: 625 GCFVPADQAVIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEI 683
Score = 56.2 bits (134), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT+ G RML+ + P +++A+KQRQ A
Sbjct: 256 IMDAATRRNLELTQNLSGGVENTLAAVLDCTVTAMGSRMLKRWIHMPSRDIEALKQRQQA 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
IS L D I ++ ++ + DLER+L
Sbjct: 316 ISALQD---IAPDLQPSLRQVGDLERIL 340
>gi|50119993|ref|YP_049160.1| DNA mismatch repair protein MutS [Pectobacterium atrosepticum
SCRI1043]
gi|81693385|sp|Q6D8C1.1|MUTS_ERWCT RecName: Full=DNA mismatch repair protein MutS
gi|49610519|emb|CAG73964.1| DNA mismatch repair protein [Pectobacterium atrosepticum SCRI1043]
Length = 854
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPAD + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL L+DE+
Sbjct: 639 GCFVPADQAVIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEI 697
Score = 58.5 bits (140), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT+ G RML+ + P ++DA+KQRQ A
Sbjct: 270 IMDAATRRNLELTQNLSGGVENTLAAVLDCTVTAMGSRMLKRWIHMPSRDIDALKQRQQA 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
IS L + IT ++ ++ + DLER+L
Sbjct: 330 ISAL---QEITPDLQPYLRQVGDLERIL 354
>gi|428185652|gb|EKX54504.1| Msh6 mismatch repair muts-like protein, meiosis and mitosis
[Guillardia theta CCMP2712]
Length = 1322
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D L NL V+ N TEGTL++ LD C T+FGKR R + PL ++ AI R DA
Sbjct: 692 IIDGQTLCNLEVIENCSGGTEGTLLKFLDRCSTAFGKRKFRNWVCSPLQDVSAINLRLDA 751
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ ++++AK+K L D+ER L
Sbjct: 752 AE-FFSSSSVRKEIQAKLKKLPDVERHL 778
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 41/59 (69%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA + PVDRIFTR+GA D + QST++ EL+E+ I+++A+ SL ++DEL
Sbjct: 1116 GAYVPAACCRMRPVDRIFTRIGASDRIMAGQSTFMVELSETSIILQNATSRSLVILDEL 1174
>gi|344302169|gb|EGW32474.1| mismatch repair ATPase MSH6 [Spathaspora passalidarum NRRL Y-27907]
Length = 1223
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 38/91 (41%), Positives = 52/91 (57%)
Query: 66 DQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLS 125
DQ H A L R + LS GC +PA S LTPVDRI TR+GA DN+
Sbjct: 965 DQPHFGLLTGANAAGKSTLMRTTALAVILSQIGCYIPAQSAELTPVDRIMTRLGANDNIL 1024
Query: 126 GAQSTYLAELTESETIMRHASKYSLALVDEL 156
+ST+ EL+E++ I+ +A+ SL ++DEL
Sbjct: 1025 QGKSTFFVELSETKKILSNATPRSLVILDEL 1055
Score = 60.8 bits (146), Expect = 2e-07, Method: Composition-based stats.
Identities = 36/90 (40%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L NL +L NS D +GTL + L+ T FGKR L+ ++ PL ++ I QR D
Sbjct: 618 ILDGITLNNLEILNNSTDGGDKGTLFKLLNRATTPFGKRQLKKWILYPLMKINEINQRYD 677
Query: 60 AISVLL-DQKHITEQMRAKMKDLRDLERML 88
A+ L+ D I + + + +L DLER+L
Sbjct: 678 AVDYLMNDGLEIRSIVESCLNELPDLERLL 707
>gi|421082973|ref|ZP_15543852.1| DNA mismatch repair protein mutS [Pectobacterium wasabiae CFBP
3304]
gi|401702199|gb|EJS92443.1| DNA mismatch repair protein mutS [Pectobacterium wasabiae CFBP
3304]
Length = 854
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPAD + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL L+DE+
Sbjct: 639 GCFVPADQAVIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEI 697
Score = 60.1 bits (144), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT+ G RML+ + P ++DA+KQRQ A
Sbjct: 270 IMDAATRRNLELTQNLSGGVENTLAAVLDCTVTAMGSRMLKRWIHMPSRDIDALKQRQQA 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
IS L + IT ++ M+ + DLER+L
Sbjct: 330 ISAL---QEITPDLQPYMRQVGDLERIL 354
>gi|227115140|ref|ZP_03828796.1| DNA mismatch repair protein [Pectobacterium carotovorum subsp.
brasiliensis PBR1692]
Length = 840
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPAD + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL L+DE+
Sbjct: 625 GCFVPADQAVIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEI 683
Score = 59.3 bits (142), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT+ G RML+ + P ++DA+KQRQ A
Sbjct: 256 IMDAATRRNLELTQNLSGGVENTLAAVLDCTVTAMGSRMLKRWIHMPSRDIDALKQRQQA 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
IS L D IT ++ ++ + DLER+L
Sbjct: 316 ISALQD---ITPDLQPYLRQVGDLERIL 340
>gi|253687360|ref|YP_003016550.1| DNA mismatch repair protein MutS [Pectobacterium carotovorum subsp.
carotovorum PC1]
gi|259511172|sp|C6DAK6.1|MUTS_PECCP RecName: Full=DNA mismatch repair protein MutS
gi|251753938|gb|ACT12014.1| DNA mismatch repair protein MutS [Pectobacterium carotovorum subsp.
carotovorum PC1]
Length = 854
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPAD + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL L+DE+
Sbjct: 639 GCFVPADQAVIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEI 697
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT+ G RML+ + P ++DA++QRQ A
Sbjct: 270 IMDAATRRNLELTQNLSGGVENTLAAVLDCTVTAMGSRMLKRWIHMPSRDIDALQQRQQA 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
IS L D IT ++ ++ + DLER+L
Sbjct: 330 ISALQD---ITPDLQPYLRQVGDLERIL 354
>gi|226723065|sp|B8CJQ5.1|MUTS_SHEPW RecName: Full=DNA mismatch repair protein MutS
gi|212555698|gb|ACJ28152.1| MutS 1 protein [Shewanella piezotolerans WP3]
Length = 860
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ GC VPA+ + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL
Sbjct: 635 TLMAHIGCYVPAEHAVIGPVDRIFTRIGASDDLASGRSTFMVEMTETANILHNATPNSLV 694
Query: 152 LVDEL 156
L+DE+
Sbjct: 695 LMDEI 699
Score = 44.3 bits (103), Expect = 0.015, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N TL LD VT+ G RML+ L +PL + IK RQ +
Sbjct: 270 VLDAATRRNLELTVNLQGGHTNTLASVLDSTVTAMGSRMLQRWLHQPLRDHQVIKARQSS 329
Query: 61 ISVLLDQKHITEQMRAK-MKDLRDLERM 87
I+ L+ ++ Q+ A+ +K L D+ER+
Sbjct: 330 IAELIATENY--QLLAEDLKALGDVERI 355
>gi|383317595|ref|YP_005378437.1| DNA mismatch repair protein MutS [Frateuria aurantia DSM 6220]
gi|379044699|gb|AFC86755.1| DNA mismatch repair protein MutS [Frateuria aurantia DSM 6220]
Length = 910
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L+ G VPAD + PVDRIFTR+GA D+LS QST++ E++E+ I+ +A+ +SL
Sbjct: 681 TLLAHIGSYVPADKAVIGPVDRIFTRIGAGDDLSRGQSTFMVEMSETANILHNATAHSLV 740
Query: 152 LVDEL 156
L+DE+
Sbjct: 741 LMDEV 745
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/87 (39%), Positives = 51/87 (58%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + T+ TE TL+ LD VT G R+LR L +PL + +K RQ AI
Sbjct: 317 LDAATRRNLELDTHPTGRTEYTLLGVLDETVTPMGARLLRRWLNRPLRSRAVLKARQQAI 376
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ LL+ + E +R +++ + DLER+L
Sbjct: 377 AALLNGREY-EGLREQLRAIGDLERIL 402
>gi|13241466|gb|AAK16326.1| DNA mismatch repair protein MutS [Escherichia coli]
Length = 126
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+
Sbjct: 30 MAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLM 89
Query: 154 DEL 156
DE+
Sbjct: 90 DEI 92
>gi|167623165|ref|YP_001673459.1| DNA mismatch repair protein MutS [Shewanella halifaxensis HAW-EB4]
gi|189083191|sp|B0TK13.1|MUTS_SHEHH RecName: Full=DNA mismatch repair protein MutS
gi|167353187|gb|ABZ75800.1| DNA mismatch repair protein MutS [Shewanella halifaxensis HAW-EB4]
Length = 859
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ GC VPA+ + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL
Sbjct: 635 TLMAHIGCYVPAEHAVIGPVDRIFTRIGASDDLASGRSTFMVEMTETANILHNATPNSLV 694
Query: 152 LVDEL 156
L+DE+
Sbjct: 695 LMDEI 699
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 46/87 (52%), Gaps = 1/87 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N E TL LD+ VT G RML+ L +PL + D I+ RQ +
Sbjct: 270 VLDAATRRNLELTVNLQGGRENTLASVLDNTVTPMGSRMLQRWLHQPLRDHDIIRARQVS 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERM 87
I LL + E + +K + D+ER+
Sbjct: 330 IEELLGNANY-EILSEDLKAIGDIERI 355
>gi|52697754|gb|AAU86614.1| DNA mismatch repair protein [Shigella boydii]
Length = 187
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 62 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 121
Query: 153 VDEL 156
+DE+
Sbjct: 122 MDEI 125
>gi|432482043|ref|ZP_19723997.1| DNA mismatch repair protein mutS [Escherichia coli KTE210]
gi|431005714|gb|ELD20728.1| DNA mismatch repair protein mutS [Escherichia coli KTE210]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKIEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|403057436|ref|YP_006645653.1| DNA mismatch repair protein MutS [Pectobacterium carotovorum subsp.
carotovorum PCC21]
gi|402804762|gb|AFR02400.1| DNA mismatch repair protein MutS [Pectobacterium carotovorum subsp.
carotovorum PCC21]
Length = 840
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPAD + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL L+DE+
Sbjct: 625 GCFVPADQAVIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEI 683
Score = 58.9 bits (141), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT+ G RML+ + P ++DA+KQRQ A
Sbjct: 256 IMDAATRRNLELTQNLSGGVENTLAAVLDCTVTAMGSRMLKRWIHMPSRDIDALKQRQQA 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
IS L D IT ++ ++ + DLER+L
Sbjct: 316 ISALQD---ITPDLQPYLRQVGDLERIL 340
>gi|330859889|emb|CBX70220.1| hypothetical protein YEW_GS29110 [Yersinia enterocolitica W22703]
Length = 297
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L+ G VPAD T+ PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL L
Sbjct: 78 LLAHMGSYVPADQATIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLVL 137
Query: 153 VDEL 156
+DE+
Sbjct: 138 MDEI 141
>gi|419009320|ref|ZP_13556739.1| DNA mismatch repair protein MutS [Escherichia coli DEC1C]
gi|377841153|gb|EHU06219.1| DNA mismatch repair protein MutS [Escherichia coli DEC1C]
Length = 585
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 364 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 423
Query: 153 VDEL 156
+DE+
Sbjct: 424 MDEI 427
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 43/87 (49%), Gaps = 3/87 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ I
Sbjct: 1 MDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQTI 60
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
L D T +++ ++ + DLER+L
Sbjct: 61 GALQD---FTAELQPVLRQVGDLERIL 84
>gi|21951852|gb|AAM82372.1| mismatch repair protein MutS [Escherichia coli]
gi|21951854|gb|AAM82373.1| mismatch repair protein MutS [Escherichia coli]
Length = 376
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 166 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 225
Query: 153 VDEL 156
+DE+
Sbjct: 226 MDEI 229
>gi|298710503|emb|CBJ25567.1| MutS protein homolog 6 [Ectocarpus siliculosus]
Length = 1372
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 42/59 (71%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPAD LTP+DRIFTR+GA D + QST+ EL+E+ I+ HA+ SL ++DEL
Sbjct: 1154 GCFVPADEAHLTPLDRIFTRVGASDRILAGQSTFFLELSETANILHHATSRSLVILDEL 1212
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD +L+NL VL NS D +G+L ++ C T+FG+R+L+ ++KPL I R D
Sbjct: 719 VLDGVSLSNLEVLRNSSDGGEKGSLWAFVNRCSTAFGRRLLKDWVLKPLLFPTHINGRLD 778
Query: 60 AISVLL-DQKHITEQMRAKMKDLRDLERML 88
A+S L D + RA +K L D+ER+L
Sbjct: 779 AVSELAGDLSPEADASRALLKKLPDVERLL 808
>gi|52855252|gb|AAU88500.1| DNA mismatch repair protein [Escherichia coli]
Length = 180
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 61 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 120
Query: 153 VDEL 156
+DE+
Sbjct: 121 MDEI 124
>gi|420257314|ref|ZP_14760076.1| DNA mismatch repair protein MutS [Yersinia enterocolitica subsp.
enterocolitica WA-314]
gi|404515240|gb|EKA29013.1| DNA mismatch repair protein MutS [Yersinia enterocolitica subsp.
enterocolitica WA-314]
Length = 851
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHMGSYVPADQATIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D+ NL + N TE TL LD VT+ G RML+ L P+ + + RQ A
Sbjct: 268 VMDAATRRNLELTQNLSGGTENTLAAILDCTVTAMGSRMLKRWLHMPIRDTKVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D IT +++ ++ + DLER+L
Sbjct: 328 IGGLQD---ITAELQTPLRQVGDLERIL 352
>gi|320163391|gb|EFW40290.1| mismatch repair protein Msh6 [Capsaspora owczarzaki ATCC 30864]
Length = 1363
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA L+PVDRIFTR+GA DN+ QST++ EL E+ I+++A++ SL ++DEL
Sbjct: 1164 GCFVPAAKCVLSPVDRIFTRIGANDNILAGQSTFMVELRETSNILKNATRDSLVILDEL 1222
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 25/70 (35%), Positives = 42/70 (60%)
Query: 19 TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKM 78
+++G+L L+ CV+ FGKR+ R L PL ++ I R DA+ LL ++T + +
Sbjct: 783 SSDGSLHALLNRCVSPFGKRLFRRWLCHPLRHIPEINDRYDAVEDLLRLSNLTGNLTTTL 842
Query: 79 KDLRDLERML 88
+ L DLER++
Sbjct: 843 RKLPDLERIV 852
>gi|52698258|gb|AAU86866.1| DNA mismatch repair protein [Shigella flexneri]
Length = 182
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 60 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 119
Query: 153 VDEL 156
+DE+
Sbjct: 120 MDEI 123
>gi|445434048|ref|ZP_21439851.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC021]
gi|444756916|gb|ELW81453.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC021]
Length = 881
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSAGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 35.8 bits (81), Expect = 5.6, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYH-ESPVRLVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|57996870|emb|CAI45883.1| negative response regulator [Escherichia coli]
Length = 182
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 61 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 120
Query: 153 VDEL 156
+DE+
Sbjct: 121 MDEI 124
>gi|15803252|ref|NP_289284.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EDL933]
gi|12517186|gb|AAG57842.1|AE005501_11 methyl-directed mismatch repair [Escherichia coli O157:H7 str.
EDL933]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVXIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|123441129|ref|YP_001005117.1| DNA mismatch repair protein MutS [Yersinia enterocolitica subsp.
enterocolitica 8081]
gi|166232150|sp|A1JJU1.1|MUTS_YERE8 RecName: Full=DNA mismatch repair protein MutS
gi|122088090|emb|CAL10878.1| DNA mismatch repair protein MutS [Yersinia enterocolitica subsp.
enterocolitica 8081]
Length = 851
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHMGSYVPADQATIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D+ NL + N TE TL LD VT+ G RML+ L P+ + + RQ A
Sbjct: 268 VMDAATRRNLELTQNLSGGTENTLAAILDCTVTAMGSRMLKRWLHMPIRDTKVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D IT +++ ++ + DLER+L
Sbjct: 328 IGGLQD---ITAELQTPLRQVGDLERIL 352
>gi|302678711|ref|XP_003029038.1| hypothetical protein SCHCODRAFT_258263 [Schizophyllum commune H4-8]
gi|300102727|gb|EFI94135.1| hypothetical protein SCHCODRAFT_258263 [Schizophyllum commune H4-8]
Length = 1206
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 51/88 (57%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD LA+L VL N++ T EG+L++ L C+T FGKR+ R L PL + +I R DA
Sbjct: 595 VLDGQTLAHLEVLMNNEGTDEGSLLKLLSRCITPFGKRLFRIWLCMPLREISSIDDRLDA 654
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ Q K L DLER++
Sbjct: 655 VEDILNHPSFESQFADVAKGLPDLERIV 682
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 43/71 (60%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + ++ G RVPA S LTPVD I TRMGA DN+ ST+ EL E I+R A
Sbjct: 965 RMTATGVIMAQLGMRVPATSARLTPVDSILTRMGAYDNMFSNASTFKVELDECCKILRDA 1024
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1025 TPRSLVILDEL 1035
>gi|170718184|ref|YP_001785210.1| DNA mismatch repair protein MutS [Haemophilus somnus 2336]
gi|189030729|sp|B0UWV7.1|MUTS_HAES2 RecName: Full=DNA mismatch repair protein MutS
gi|168826313|gb|ACA31684.1| DNA mismatch repair protein MutS [Haemophilus somnus 2336]
Length = 859
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/156 (33%), Positives = 81/156 (51%), Gaps = 5/156 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
L S LA L VLTN E TL T G ++++ + P+ +K+ A
Sbjct: 544 LASLTLAELDVLTNLAERAE-TLNYVQPQFSTQVGLQIMQGR--HPVVE-QVLKEPFIAN 599
Query: 62 SVLLDQK-HITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGA 120
V L+QK H+ M R T +++ G VPA+S + P+DRIFTR+GA
Sbjct: 600 PVELNQKRHLLIITGPNMGGKSTYMRQTALITLMAYIGSFVPAESAVIGPIDRIFTRIGA 659
Query: 121 KDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
D+L+ +ST++ E+TE I+ A++ SL L+DE+
Sbjct: 660 SDDLASGRSTFMVEMTEMANILHQATEQSLVLIDEI 695
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D++ NL + N TE TL LD CVT G R+L+ + +P+ N++ ++ RQ I
Sbjct: 269 IDASTRRNLELTQNLAGGTENTLAAILDKCVTPMGSRLLKRWIHQPIRNIEKLQYRQQHI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+LL Q+++ E+++ ++ + D+ER+L
Sbjct: 329 QMLL-QQNLVEELQPLLRQVGDMERIL 354
>gi|443898358|dbj|GAC75693.1| mismatch repair MSH3 [Pseudozyma antarctica T-34]
Length = 1112
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 58/94 (61%), Gaps = 1/94 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+L+S LANL + D +G+LI LD C TS G+R+LR + +PLT++DA+++R DA
Sbjct: 522 LLNSNTLANLEIFRTVDGQEKGSLIWLLDKCRTSMGRRLLRKWVSRPLTDVDALEKRLDA 581
Query: 61 ISVLLDQK-HITEQMRAKMKDLRDLERMLPSSTF 93
I ++ K ++ + ++ L DLER L T+
Sbjct: 582 IEAIISAKSYVVRMLPNFLQGLPDLERGLARMTY 615
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 35/59 (59%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA L D +F RMGA+D + +ST++ E+ E+ I+R + SL ++DEL
Sbjct: 910 GSYVPAAEAKLGVHDGVFVRMGARDAMFAGRSTFMVEVAETAEILRAVTPRSLVILDEL 968
>gi|296418664|ref|XP_002838949.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634935|emb|CAZ83140.1| unnamed protein product [Tuber melanosporum]
Length = 1032
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM ++ GC VP+ S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A
Sbjct: 807 RMTCVGVIMAQIGCFVPSKSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILAEA 866
Query: 146 SKYSLALVDEL 156
+ +SL ++DEL
Sbjct: 867 TPHSLVILDEL 877
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/83 (34%), Positives = 41/83 (49%), Gaps = 1/83 (1%)
Query: 7 LANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLL 65
L NL + NS D GTL L+ C+T FGKRM + + PL + D I R DA+ L
Sbjct: 446 LLNLEIFANSSDGGPTGTLFSLLNRCITPFGKRMFKLWVCHPLADSDKINARLDAVESLN 505
Query: 66 DQKHITEQMRAKMKDLRDLERML 88
+ + + DLER++
Sbjct: 506 SNNGFQDAFVTHLNKMPDLERLI 528
>gi|238786820|ref|ZP_04630621.1| DNA mismatch repair protein mutS [Yersinia frederiksenii ATCC
33641]
gi|238725188|gb|EEQ16827.1| DNA mismatch repair protein mutS [Yersinia frederiksenii ATCC
33641]
Length = 851
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHMGSYVPADQATIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 55.1 bits (131), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N TE TL LD VT+ G RML+ L P+ +++ + RQ A
Sbjct: 268 IMDAATRRNLELTLNLSGGTENTLAAILDCSVTAMGSRMLKRWLHMPIRDINILTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D IT +++A ++ + DLER+L
Sbjct: 328 IGGLQD---ITAELQAPLRQVGDLERIL 352
>gi|432447273|ref|ZP_19689571.1| DNA mismatch repair protein mutS [Escherichia coli KTE191]
gi|433024556|ref|ZP_20212535.1| DNA mismatch repair protein mutS [Escherichia coli KTE106]
gi|433322441|ref|ZP_20399884.1| DNA mismatch repair protein MutS [Escherichia coli J96]
gi|430972119|gb|ELC89117.1| DNA mismatch repair protein mutS [Escherichia coli KTE191]
gi|431533780|gb|ELI10273.1| DNA mismatch repair protein mutS [Escherichia coli KTE106]
gi|432348947|gb|ELL43389.1| DNA mismatch repair protein MutS [Escherichia coli J96]
Length = 855
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 634 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 693
Query: 153 VDEL 156
+DE+
Sbjct: 694 MDEI 697
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 270 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 330 IGALQD---FTAELQPVLRQVGDLERIL 354
>gi|418945253|ref|ZP_13498141.1| DNA mismatch repair protein MutS [Escherichia coli O157:H43 str.
T22]
gi|375319429|gb|EHS65588.1| DNA mismatch repair protein MutS [Escherichia coli O157:H43 str.
T22]
Length = 664
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 443 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 502
Query: 153 VDEL 156
+DE+
Sbjct: 503 MDEI 506
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 79 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 138
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 139 IGALQD---FTAELQPVLRQVGDLERIL 163
>gi|325955087|ref|YP_004238747.1| DNA mismatch repair protein mutS [Weeksella virosa DSM 16922]
gi|323437705|gb|ADX68169.1| DNA mismatch repair protein mutS [Weeksella virosa DSM 16922]
Length = 864
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPADS ++ VDRIFTR+GA DN+S +ST++ E+ E+ +I+ + S+ SL L+DE+
Sbjct: 638 GCYVPADSASIGIVDRIFTRVGASDNISSGESTFMVEMNETASILNNISERSLILLDEI 696
>gi|255728741|ref|XP_002549296.1| hypothetical protein CTRG_03593 [Candida tropicalis MYA-3404]
gi|240133612|gb|EER33168.1| hypothetical protein CTRG_03593 [Candida tropicalis MYA-3404]
Length = 1222
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 46/63 (73%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
LS GC +PA+S LTPVDRI TR+GA DN+ +ST+ EL+E++ I+ +A+ SL ++
Sbjct: 994 LSQIGCHIPAESAKLTPVDRIMTRLGANDNIMQGKSTFFVELSETKKILSNATPKSLVIL 1053
Query: 154 DEL 156
DEL
Sbjct: 1054 DEL 1056
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 8/93 (8%)
Query: 1 ILDSTALANLHVLTN-SDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L NL +L N +D + +GTL + L+ TSFGKR+L+ ++ PL +D I R D
Sbjct: 621 ILDGITLNNLEILHNTADGSDKGTLFKLLNRATTSFGKRLLQQWILHPLYKIDEINARYD 680
Query: 60 AISVLLDQKHITEQMRAKMKD----LRDLERML 88
++ ++ ++R+ ++D L DLER+L
Sbjct: 681 SVDFFMNDGL---ELRSAIQDVLFTLPDLERLL 710
>gi|189030770|sp|A7ZQH3.2|MUTS_ECO24 RecName: Full=DNA mismatch repair protein MutS
Length = 855
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 634 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 693
Query: 153 VDEL 156
+DE+
Sbjct: 694 MDEI 697
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 270 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 330 IGALQD---FTAELQPVLRQVGDLERIL 354
>gi|432398649|ref|ZP_19641427.1| DNA mismatch repair protein mutS [Escherichia coli KTE25]
gi|432407776|ref|ZP_19650482.1| DNA mismatch repair protein mutS [Escherichia coli KTE28]
gi|432724169|ref|ZP_19959085.1| DNA mismatch repair protein mutS [Escherichia coli KTE17]
gi|432728751|ref|ZP_19963627.1| DNA mismatch repair protein mutS [Escherichia coli KTE18]
gi|432742435|ref|ZP_19977152.1| DNA mismatch repair protein mutS [Escherichia coli KTE23]
gi|432991800|ref|ZP_20180463.1| DNA mismatch repair protein mutS [Escherichia coli KTE217]
gi|433111936|ref|ZP_20297795.1| DNA mismatch repair protein mutS [Escherichia coli KTE150]
gi|430914227|gb|ELC35330.1| DNA mismatch repair protein mutS [Escherichia coli KTE25]
gi|430928707|gb|ELC49253.1| DNA mismatch repair protein mutS [Escherichia coli KTE28]
gi|431264423|gb|ELF56137.1| DNA mismatch repair protein mutS [Escherichia coli KTE17]
gi|431272316|gb|ELF63423.1| DNA mismatch repair protein mutS [Escherichia coli KTE18]
gi|431282668|gb|ELF73547.1| DNA mismatch repair protein mutS [Escherichia coli KTE23]
gi|431493942|gb|ELH73533.1| DNA mismatch repair protein mutS [Escherichia coli KTE217]
gi|431626972|gb|ELI95384.1| DNA mismatch repair protein mutS [Escherichia coli KTE150]
Length = 855
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 634 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 693
Query: 153 VDEL 156
+DE+
Sbjct: 694 MDEI 697
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 270 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 330 IGALQD---FTAELQPVLRQVGDLERIL 354
>gi|13241580|gb|AAK16383.1| DNA mismatch repair protein MutS [Escherichia coli]
Length = 126
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 29 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 88
Query: 153 VDEL 156
+DE+
Sbjct: 89 MDEI 92
>gi|395324921|gb|EJF57352.1| DNA mismatch repair protein Msh6 [Dichomitus squalens LYAD-421 SS1]
Length = 1291
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 39/101 (38%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD LA++ VL NS+ T EGTL++ L C+T GKR+ R L PL + I R DA
Sbjct: 678 VLDGQTLAHIEVLQNSEGTEEGTLLKLLSRCITPSGKRLFRIWLCMPLREVKDINARLDA 737
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRV 101
+ LLD Q + K L DLER++ + + + C+V
Sbjct: 738 VQDLLDHPTFEAQFASIAKGLPDLERIV---SRIHAKNCKV 775
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 39/71 (54%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + ++ G VPA L PVD I TRMGA DN+ ST+ EL E I+R A
Sbjct: 1049 RMTATGIIMAQLGMLVPAKRARLCPVDSILTRMGAYDNMFSNASTFKVELDECCKILRDA 1108
Query: 146 SKYSLALVDEL 156
+ S ++DEL
Sbjct: 1109 TPKSFVILDEL 1119
>gi|157156430|ref|YP_001464052.1| DNA mismatch repair protein MutS [Escherichia coli E24377A]
gi|157078460|gb|ABV18168.1| DNA mismatch repair protein MutS [Escherichia coli E24377A]
Length = 860
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 639 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 698
Query: 153 VDEL 156
+DE+
Sbjct: 699 MDEI 702
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 275 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 334
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 335 IGALQD---FTAELQPVLRQVGDLERIL 359
>gi|432870164|ref|ZP_20090621.1| DNA mismatch repair protein mutS [Escherichia coli KTE147]
gi|431409134|gb|ELG92309.1| DNA mismatch repair protein mutS [Escherichia coli KTE147]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|13241578|gb|AAK16382.1| DNA mismatch repair protein MutS [Escherichia coli]
Length = 126
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 29 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 88
Query: 153 VDEL 156
+DE+
Sbjct: 89 MDEI 92
>gi|444964784|ref|ZP_21282384.1| DNA mismatch repair protein MutS, partial [Escherichia coli
99.1775]
gi|444575748|gb|ELV51977.1| DNA mismatch repair protein MutS, partial [Escherichia coli
99.1775]
Length = 674
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 453 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 512
Query: 153 VDEL 156
+DE+
Sbjct: 513 MDEI 516
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 89 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 148
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 149 IGALQD---FTAELQPVLRQVGDLERIL 173
>gi|63028600|gb|AAY27167.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028648|gb|AAY27191.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028656|gb|AAY27195.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028696|gb|AAY27215.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028704|gb|AAY27219.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028710|gb|AAY27222.1| major DNA mismatch repair protein [Escherichia coli]
Length = 126
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 29 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 88
Query: 153 VDEL 156
+DE+
Sbjct: 89 MDEI 92
>gi|218701226|ref|YP_002408855.1| DNA mismatch repair protein MutS [Escherichia coli IAI39]
gi|386625454|ref|YP_006145182.1| methyl-directed mismatch repair protein [Escherichia coli O7:K1
str. CE10]
gi|226723057|sp|B7NT79.1|MUTS_ECO7I RecName: Full=DNA mismatch repair protein MutS
gi|218371212|emb|CAR19043.1| methyl-directed mismatch repair protein [Escherichia coli IAI39]
gi|349739191|gb|AEQ13897.1| methyl-directed mismatch repair protein [Escherichia coli O7:K1
str. CE10]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|52698236|gb|AAU86855.1| DNA mismatch repair protein [Shigella boydii]
Length = 194
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 69 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 128
Query: 153 VDEL 156
+DE+
Sbjct: 129 MDEI 132
>gi|8052216|emb|CAB92351.1| MutS protein [Escherichia coli]
Length = 130
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 31 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 90
Query: 153 VDEL 156
+DE+
Sbjct: 91 MDEI 94
>gi|432554768|ref|ZP_19791487.1| DNA mismatch repair protein mutS [Escherichia coli KTE47]
gi|431082119|gb|ELD88433.1| DNA mismatch repair protein mutS [Escherichia coli KTE47]
Length = 855
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 634 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 693
Query: 153 VDEL 156
+DE+
Sbjct: 694 MDEI 697
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 270 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 330 IGALQD---FTAELQPVLRQVGDLERIL 354
>gi|332160356|ref|YP_004296933.1| DNA mismatch repair protein MutS [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|386309716|ref|YP_006005772.1| DNA mismatch repair protein MutS [Yersinia enterocolitica subsp.
palearctica Y11]
gi|418242265|ref|ZP_12868779.1| DNA mismatch repair protein MutS [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|433551194|ref|ZP_20507237.1| DNA mismatch repair protein MutS [Yersinia enterocolitica IP 10393]
gi|318604410|emb|CBY25908.1| DNA mismatch repair protein MutS [Yersinia enterocolitica subsp.
palearctica Y11]
gi|325664586|gb|ADZ41230.1| DNA mismatch repair protein MutS [Yersinia enterocolitica subsp.
palearctica 105.5R(r)]
gi|351778295|gb|EHB20457.1| DNA mismatch repair protein MutS [Yersinia enterocolitica subsp.
palearctica PhRBD_Ye1]
gi|431788293|emb|CCO70277.1| DNA mismatch repair protein MutS [Yersinia enterocolitica IP 10393]
Length = 851
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHMGSYVPADQATIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D+ NL + N TE TL LD VT+ G RML+ L P+ + + RQ A
Sbjct: 268 VMDAATRRNLELTQNLSGGTENTLAAILDCTVTAMGSRMLKRWLHMPIRDTKVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L + IT +++ ++ + DLER+L
Sbjct: 328 IGGL---QEITAELQTPLRQVGDLERIL 352
>gi|313204209|ref|YP_004042866.1| DNA mismatch repair protein muts [Paludibacter propionicigenes WB4]
gi|312443525|gb|ADQ79881.1| DNA mismatch repair protein MutS [Paludibacter propionicigenes WB4]
Length = 870
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 51/155 (32%), Positives = 78/155 (50%), Gaps = 20/155 (12%)
Query: 21 EGTLIEQLDHCVTSFGKRMLRAQLVKP-LTNLDAIKQRQDAISVLLDQKHITEQMRAK-- 77
+ LI QLD C+ SF + + V+P +T+ D ++ +Q V+ Q I E A
Sbjct: 545 DSNLIAQLD-CLLSFTRVSSENKYVRPQVTDTDVLEIKQGRHPVIEKQLPIGESYIANDV 603
Query: 78 ----------------MKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAK 121
M L R T ++ GC VPA+S ++ VD+IFTR+GA
Sbjct: 604 YLDNETQQIIIITGPNMSGKSALLRQTAIITLMAQIGCFVPAESASIGVVDKIFTRVGAS 663
Query: 122 DNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
DN+S +ST++ E+ E+ +I+ + S SL L DEL
Sbjct: 664 DNISQGESTFMVEMNEAASILNNLSNRSLVLFDEL 698
>gi|300941112|ref|ZP_07155624.1| DNA mismatch repair protein MutS [Escherichia coli MS 21-1]
gi|432681261|ref|ZP_19916631.1| DNA mismatch repair protein mutS [Escherichia coli KTE143]
gi|300454155|gb|EFK17648.1| DNA mismatch repair protein MutS [Escherichia coli MS 21-1]
gi|431219460|gb|ELF16871.1| DNA mismatch repair protein mutS [Escherichia coli KTE143]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|270157146|ref|ZP_06185803.1| DNA mismatch repair protein MutS [Legionella longbeachae D-4968]
gi|289164450|ref|YP_003454588.1| DNA mismatch repair protein MutS [Legionella longbeachae NSW150]
gi|269989171|gb|EEZ95425.1| DNA mismatch repair protein MutS [Legionella longbeachae D-4968]
gi|288857623|emb|CBJ11463.1| DNA mismatch repair protein MutS [Legionella longbeachae NSW150]
Length = 845
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPA ++TL P+DRIFTR+GA D+L+ +ST++ E+TE+ I+R A+ SL
Sbjct: 627 VLLAHIGSFVPATAVTLGPIDRIFTRIGASDDLASGRSTFMVEMTETAQILRQATHQSLV 686
Query: 152 LVDEL 156
L+DE+
Sbjct: 687 LIDEI 691
Score = 44.3 bits (103), Expect = 0.017, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 47/89 (52%), Gaps = 5/89 (5%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ +L + N E TLI +D S G R+L+ L +PL ++IK+RQ+AI
Sbjct: 263 LDAATQKHLELFENISGGQENTLISIVDKTACSMGSRLLKRWLGRPLKQHESIKERQEAI 322
Query: 62 S--VLLDQKHITEQMRAKMKDLRDLERML 88
+ L Q + + ++ + D+ER++
Sbjct: 323 EEIIKLQQSPVLNHL---LRQICDVERIV 348
>gi|238750592|ref|ZP_04612092.1| DNA mismatch repair protein mutS [Yersinia rohdei ATCC 43380]
gi|238711240|gb|EEQ03458.1| DNA mismatch repair protein mutS [Yersinia rohdei ATCC 43380]
Length = 819
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 599 VLLAHMGSYVPADQATIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 658
Query: 152 LVDEL 156
L+DE+
Sbjct: 659 LMDEI 663
Score = 55.8 bits (133), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N TE TL LD VT+ G RML+ L P+ +++ + RQ A
Sbjct: 236 IMDAATRRNLELTQNLSGGTENTLAAILDCSVTAMGSRMLKRWLHMPIRDINVLTARQQA 295
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D IT +++A ++ + DLER+L
Sbjct: 296 IGGLQD---ITAELQAPLRQVGDLERIL 320
>gi|218690858|ref|YP_002399070.1| DNA mismatch repair protein MutS [Escherichia coli ED1a]
gi|254766628|sp|B7MYN6.1|MUTS_ECO81 RecName: Full=DNA mismatch repair protein MutS
gi|218428422|emb|CAR09202.1| methyl-directed mismatch repair protein [Escherichia coli ED1a]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|170680116|ref|YP_001744884.1| DNA mismatch repair protein MutS [Escherichia coli SMS-3-5]
gi|226723060|sp|B1LQ55.1|MUTS_ECOSM RecName: Full=DNA mismatch repair protein MutS
gi|170517834|gb|ACB16012.1| DNA mismatch repair protein MutS [Escherichia coli SMS-3-5]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|432366215|ref|ZP_19609334.1| DNA mismatch repair protein mutS [Escherichia coli KTE10]
gi|430892486|gb|ELC14977.1| DNA mismatch repair protein mutS [Escherichia coli KTE10]
Length = 855
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 634 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 693
Query: 153 VDEL 156
+DE+
Sbjct: 694 MDEI 697
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 270 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 330 IGALQD---FTAELQPVLRQVGDLERIL 354
>gi|1592569|gb|AAB97931.1| DNA mismatch repair protein [Escherichia coli]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRHTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|331006215|ref|ZP_08329537.1| DNA mismatch repair protein MutS [gamma proteobacterium IMCC1989]
gi|330419972|gb|EGG94316.1| DNA mismatch repair protein MutS [gamma proteobacterium IMCC1989]
Length = 901
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 50/65 (76%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L+ G VPA S T++ VDRIFTR+G+ D+L+G +ST++ E+TE+ I+++A+K SL
Sbjct: 661 TLLAHIGSYVPAKSATISIVDRIFTRIGSSDDLAGGRSTFMVEMTETANILQNATKNSLV 720
Query: 152 LVDEL 156
L+DE+
Sbjct: 721 LMDEI 725
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D++ NL + TN + TL L+ C T+ G R L + +PLT D + QRQ+A
Sbjct: 284 LMDASTRRNLELCTNLSGGEDNTLFSILNTCATTMGSRQLARWINRPLTQQDILVQRQEA 343
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I LL E M +K + DLER+L
Sbjct: 344 IGTLLGNYRF-EPMHDTLKAIGDLERIL 370
>gi|422780348|ref|ZP_16833133.1| DNA mismatch repair protein MutS [Escherichia coli TW10509]
gi|323978657|gb|EGB73739.1| DNA mismatch repair protein MutS [Escherichia coli TW10509]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|432359050|ref|ZP_19602268.1| DNA mismatch repair protein mutS [Escherichia coli KTE4]
gi|430875571|gb|ELB99106.1| DNA mismatch repair protein mutS [Escherichia coli KTE4]
Length = 855
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 634 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 693
Query: 153 VDEL 156
+DE+
Sbjct: 694 MDEI 697
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 270 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 330 IGALQD---FTAELQPVLRQVGDLERIL 354
>gi|13241460|gb|AAK16323.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241462|gb|AAK16324.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241464|gb|AAK16325.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241468|gb|AAK16327.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241470|gb|AAK16328.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241472|gb|AAK16329.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241474|gb|AAK16330.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241494|gb|AAK16340.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241496|gb|AAK16341.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241542|gb|AAK16364.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241550|gb|AAK16368.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241552|gb|AAK16369.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241554|gb|AAK16370.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241556|gb|AAK16371.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241558|gb|AAK16372.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241570|gb|AAK16378.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241574|gb|AAK16380.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241582|gb|AAK16384.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241584|gb|AAK16385.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|63028588|gb|AAY27161.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028592|gb|AAY27163.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028594|gb|AAY27164.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028596|gb|AAY27165.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028598|gb|AAY27166.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028602|gb|AAY27168.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028604|gb|AAY27169.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028606|gb|AAY27170.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028608|gb|AAY27171.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028610|gb|AAY27172.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028612|gb|AAY27173.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028614|gb|AAY27174.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028616|gb|AAY27175.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028618|gb|AAY27176.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028620|gb|AAY27177.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028622|gb|AAY27178.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028624|gb|AAY27179.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028626|gb|AAY27180.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028628|gb|AAY27181.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028630|gb|AAY27182.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028632|gb|AAY27183.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028634|gb|AAY27184.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028636|gb|AAY27185.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028638|gb|AAY27186.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028640|gb|AAY27187.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028642|gb|AAY27188.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028644|gb|AAY27189.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028646|gb|AAY27190.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028650|gb|AAY27192.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028652|gb|AAY27193.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028654|gb|AAY27194.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028658|gb|AAY27196.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028660|gb|AAY27197.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028662|gb|AAY27198.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028664|gb|AAY27199.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028666|gb|AAY27200.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028668|gb|AAY27201.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028670|gb|AAY27202.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028672|gb|AAY27203.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028674|gb|AAY27204.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028676|gb|AAY27205.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028678|gb|AAY27206.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028680|gb|AAY27207.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028682|gb|AAY27208.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028684|gb|AAY27209.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028686|gb|AAY27210.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028688|gb|AAY27211.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028690|gb|AAY27212.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028692|gb|AAY27213.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028694|gb|AAY27214.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028698|gb|AAY27216.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028700|gb|AAY27217.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028702|gb|AAY27218.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028706|gb|AAY27220.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028708|gb|AAY27221.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028712|gb|AAY27223.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028714|gb|AAY27224.1| major DNA mismatch repair protein [Escherichia coli]
gi|63028716|gb|AAY27225.1| major DNA mismatch repair protein [Escherichia coli]
Length = 126
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 29 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 88
Query: 153 VDEL 156
+DE+
Sbjct: 89 MDEI 92
>gi|422828111|ref|ZP_16876283.1| DNA mismatch repair protein mutS [Escherichia coli B093]
gi|371615551|gb|EHO03950.1| DNA mismatch repair protein mutS [Escherichia coli B093]
Length = 688
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 467 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 526
Query: 153 VDEL 156
+DE+
Sbjct: 527 MDEI 530
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 103 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 162
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 163 IGALQD---FTAEIQPVLRQVGDLERIL 187
>gi|357511353|ref|XP_003625965.1| DNA mismatch repair protein Msh6-1 [Medicago truncatula]
gi|355500980|gb|AES82183.1| DNA mismatch repair protein Msh6-1 [Medicago truncatula]
Length = 1312
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 49/65 (75%), Gaps = 1/65 (1%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ AL NL + NS N + GTL QL+ CVT+FGKR+L++ L +PL ++++IK+RQ+
Sbjct: 645 VLDAVALENLEIFENSRNGESSGTLYAQLNQCVTAFGKRLLKSWLARPLYHVESIKERQE 704
Query: 60 AISVL 64
A++ L
Sbjct: 705 AVAGL 709
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VP++S L+PVDRIF RMGA+DN+ QST+L EL+E+ T++ A++ SL +DEL
Sbjct: 1087 GADVPSESFELSPVDRIFVRMGARDNIMAGQSTFLTELSETATMLSSATRNSLVALDEL 1145
>gi|215488050|ref|YP_002330481.1| DNA mismatch repair protein MutS [Escherichia coli O127:H6 str.
E2348/69]
gi|254766626|sp|B7UHE9.1|MUTS_ECO27 RecName: Full=DNA mismatch repair protein MutS
gi|215266122|emb|CAS10547.1| methyl-directed mismatch repair protein [Escherichia coli O127:H6
str. E2348/69]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLTSVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|140090314|gb|ABO85212.1| DNA mismatch repair protein, partial [Ralstonia solanacearum]
Length = 227
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 47/63 (74%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ G VPAD+ T+ P+DRIFTR+ A D+L+G +ST++ E+TE+ I+ A+ SL L+
Sbjct: 16 LAYVGAFVPADAATIGPIDRIFTRIDAADDLAGGRSTFMVEMTEAAAILHRATPNSLVLM 75
Query: 154 DEL 156
DE+
Sbjct: 76 DEI 78
>gi|432527520|ref|ZP_19764608.1| DNA mismatch repair protein mutS [Escherichia coli KTE233]
gi|432535091|ref|ZP_19772061.1| DNA mismatch repair protein mutS [Escherichia coli KTE234]
gi|431059299|gb|ELD68660.1| DNA mismatch repair protein mutS [Escherichia coli KTE234]
gi|431062336|gb|ELD71609.1| DNA mismatch repair protein mutS [Escherichia coli KTE233]
Length = 855
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 634 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 693
Query: 153 VDEL 156
+DE+
Sbjct: 694 MDEI 697
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 270 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 330 IGALQD---FTAELQPVLRQVGDLERIL 354
>gi|402588187|gb|EJW82121.1| MutS domain III family protein, partial [Wuchereria bancrofti]
Length = 764
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA + L+PVDRIFTRMGA D ++ QST+ EL E+ I+R A+K+SL ++DEL
Sbjct: 706 GSFVPASEMKLSPVDRIFTRMGAGDRITTGQSTFYVELYETNLILRSATKHSLVIMDEL 764
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/100 (28%), Positives = 50/100 (50%), Gaps = 12/100 (12%)
Query: 1 ILDSTALANLHVLTNSDN----------TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTN 50
ILDS AL +L+++ + T + L ++ C T GKR+LR + P+ +
Sbjct: 282 ILDSLALKHLNIIPPISSMKKFALCDPITAKYALYNVINKCATPAGKRLLRQWICAPVCD 341
Query: 51 LDAIKQRQDAISVL--LDQKHITEQMRAKMKDLRDLERML 88
+ + RQDAI L + K ++ ++ + DLER++
Sbjct: 342 PEILCSRQDAIEWLSKANLKRFIDKAMELLRKVPDLERLI 381
>gi|419014650|ref|ZP_13561994.1| DNA mismatch repair protein MutS [Escherichia coli DEC1D]
gi|377855631|gb|EHU20498.1| DNA mismatch repair protein MutS [Escherichia coli DEC1D]
Length = 841
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 620 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 679
Query: 153 VDEL 156
+DE+
Sbjct: 680 MDEI 683
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 256 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 316 IGALQD---FTAELQPVLRQVGDLERIL 340
>gi|417718567|ref|ZP_12367460.1| DNA mismatch repair protein MutS [Shigella flexneri K-227]
gi|333015417|gb|EGK34756.1| DNA mismatch repair protein MutS [Shigella flexneri K-227]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|312965008|ref|ZP_07779248.1| DNA mismatch repair protein MutS [Escherichia coli 2362-75]
gi|417756985|ref|ZP_12405056.1| DNA mismatch repair protein MutS [Escherichia coli DEC2B]
gi|418998145|ref|ZP_13545735.1| DNA mismatch repair protein MutS [Escherichia coli DEC1A]
gi|312290564|gb|EFR18444.1| DNA mismatch repair protein MutS [Escherichia coli 2362-75]
gi|377842095|gb|EHU07150.1| DNA mismatch repair protein MutS [Escherichia coli DEC1A]
gi|377872363|gb|EHU37009.1| DNA mismatch repair protein MutS [Escherichia coli DEC2B]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|404376038|ref|ZP_10981214.1| DNA mismatch repair protein mutS [Escherichia sp. 1_1_43]
gi|226839398|gb|EEH71419.1| DNA mismatch repair protein mutS [Escherichia sp. 1_1_43]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|52697728|gb|AAU86601.1| DNA mismatch repair protein [Shigella boydii]
Length = 192
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 67 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 126
Query: 153 VDEL 156
+DE+
Sbjct: 127 MDEI 130
>gi|52698246|gb|AAU86860.1| DNA mismatch repair protein [Shigella dysenteriae]
Length = 197
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+
Sbjct: 72 MAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLM 131
Query: 154 DEL 156
DE+
Sbjct: 132 DEI 134
>gi|386266560|ref|YP_005830052.1| DNA mismatch repair protein MutS [Haemophilus influenzae R2846]
gi|309973796|gb|ADO96997.1| DNA mismatch repair protein MutS [Haemophilus influenzae R2846]
Length = 861
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPADS + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 633 TLLAYIGSFVPADSARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATVQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ AI
Sbjct: 269 LDAATRRNLELTQNLAGGTENTLSSVLDKCVTPMGSRLLKRWIHQPIRDVEKLKQRQQAI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|13241478|gb|AAK16332.1| DNA mismatch repair protein MutS [Escherichia coli]
Length = 126
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+
Sbjct: 30 MAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLM 89
Query: 154 DEL 156
DE+
Sbjct: 90 DEI 92
>gi|410623640|ref|ZP_11334452.1| DNA mismatch repair protein MutS [Glaciecola pallidula DSM 14239 =
ACAM 615]
gi|410156856|dbj|GAC29826.1| DNA mismatch repair protein MutS [Glaciecola pallidula DSM 14239 =
ACAM 615]
Length = 904
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/63 (46%), Positives = 46/63 (73%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L++ GC VPA + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL L+
Sbjct: 648 LAYVGCYVPAKEAQIGPIDRIFTRIGAADDLASGRSTFMVEMTETANILNNATANSLVLM 707
Query: 154 DEL 156
DE+
Sbjct: 708 DEI 710
Score = 42.7 bits (99), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 51/88 (57%), Gaps = 2/88 (2%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D+ NL + +TE TL L++ T+ G R+L+ L +P+T+ + + RQ++
Sbjct: 278 LMDAATQQNLELTRTLSGSTENTLFSVLNNTSTAMGSRLLQRWLHRPITDKNKLFFRQNS 337
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I+ + Q+H ++ +K + D+ER+L
Sbjct: 338 IADV--QRHDYSILQDFLKQIGDIERIL 363
>gi|417251445|ref|ZP_12043210.1| DNA mismatch repair protein MutS [Escherichia coli 4.0967]
gi|386218294|gb|EII34777.1| DNA mismatch repair protein MutS [Escherichia coli 4.0967]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|417713813|ref|ZP_12362776.1| DNA mismatch repair protein MutS [Shigella flexneri K-272]
gi|333001078|gb|EGK20648.1| DNA mismatch repair protein MutS [Shigella flexneri K-272]
Length = 841
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 620 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 679
Query: 153 VDEL 156
+DE+
Sbjct: 680 MDEI 683
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 256 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 316 IGALQD---FTAELQPVLRQVGDLERIL 340
>gi|422807945|ref|ZP_16856373.1| DNA mismatch repair protein MutS [Escherichia fergusonii B253]
gi|324111368|gb|EGC05350.1| DNA mismatch repair protein MutS [Escherichia fergusonii B253]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|415857674|ref|ZP_11532350.1| DNA mismatch repair protein MutS [Shigella flexneri 2a str. 2457T]
gi|417739598|ref|ZP_12388173.1| DNA mismatch repair protein MutS [Shigella flexneri 4343-70]
gi|417744579|ref|ZP_12393103.1| DNA mismatch repair protein MutS [Shigella flexneri 2930-71]
gi|420343075|ref|ZP_14844543.1| DNA mismatch repair protein MutS [Shigella flexneri K-404]
gi|313648211|gb|EFS12656.1| DNA mismatch repair protein MutS [Shigella flexneri 2a str. 2457T]
gi|332753448|gb|EGJ83828.1| DNA mismatch repair protein MutS [Shigella flexneri 4343-70]
gi|332765681|gb|EGJ95894.1| DNA mismatch repair protein MutS [Shigella flexneri 2930-71]
gi|391264737|gb|EIQ23725.1| DNA mismatch repair protein MutS [Shigella flexneri K-404]
Length = 841
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 620 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 679
Query: 153 VDEL 156
+DE+
Sbjct: 680 MDEI 683
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 256 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 316 IGALQD---FTAELQPVLRQVGDLERIL 340
>gi|300922252|ref|ZP_07138378.1| DNA mismatch repair protein MutS [Escherichia coli MS 182-1]
gi|301326231|ref|ZP_07219614.1| DNA mismatch repair protein MutS [Escherichia coli MS 78-1]
gi|422959482|ref|ZP_16971117.1| DNA mismatch repair protein mutS [Escherichia coli H494]
gi|450220754|ref|ZP_21896430.1| DNA mismatch repair protein MutS [Escherichia coli O08]
gi|300421382|gb|EFK04693.1| DNA mismatch repair protein MutS [Escherichia coli MS 182-1]
gi|300847076|gb|EFK74836.1| DNA mismatch repair protein MutS [Escherichia coli MS 78-1]
gi|371595142|gb|EHN83994.1| DNA mismatch repair protein mutS [Escherichia coli H494]
gi|449316324|gb|EMD06442.1| DNA mismatch repair protein MutS [Escherichia coli O08]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|301027145|ref|ZP_07190514.1| DNA mismatch repair protein MutS [Escherichia coli MS 69-1]
gi|419920150|ref|ZP_14438277.1| DNA mismatch repair protein MutS [Escherichia coli KD2]
gi|432393178|ref|ZP_19636007.1| DNA mismatch repair protein mutS [Escherichia coli KTE21]
gi|300395177|gb|EFJ78715.1| DNA mismatch repair protein MutS [Escherichia coli MS 69-1]
gi|388385465|gb|EIL47145.1| DNA mismatch repair protein MutS [Escherichia coli KD2]
gi|430917441|gb|ELC38488.1| DNA mismatch repair protein mutS [Escherichia coli KTE21]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|218547749|ref|YP_002381540.1| DNA mismatch repair protein MutS [Escherichia fergusonii ATCC
35469]
gi|218706228|ref|YP_002413747.1| DNA mismatch repair protein MutS [Escherichia coli UMN026]
gi|293406226|ref|ZP_06650152.1| DNA mismatch repair protein mutS [Escherichia coli FVEC1412]
gi|298381963|ref|ZP_06991560.1| DNA mismatch repair protein mutS [Escherichia coli FVEC1302]
gi|300899975|ref|ZP_07118178.1| DNA mismatch repair protein MutS [Escherichia coli MS 198-1]
gi|331664290|ref|ZP_08365196.1| DNA mismatch repair protein MutS [Escherichia coli TA143]
gi|331674243|ref|ZP_08375003.1| DNA mismatch repair protein MutS [Escherichia coli TA280]
gi|387608370|ref|YP_006097226.1| DNA mismatch repair protein [Escherichia coli 042]
gi|417587743|ref|ZP_12238509.1| DNA mismatch repair protein MutS [Escherichia coli STEC_C165-02]
gi|419934512|ref|ZP_14451620.1| DNA mismatch repair protein MutS [Escherichia coli 576-1]
gi|422331723|ref|ZP_16412738.1| DNA mismatch repair protein mutS [Escherichia coli 4_1_47FAA]
gi|432354640|ref|ZP_19597909.1| DNA mismatch repair protein mutS [Escherichia coli KTE2]
gi|432402989|ref|ZP_19645739.1| DNA mismatch repair protein mutS [Escherichia coli KTE26]
gi|432427259|ref|ZP_19669752.1| DNA mismatch repair protein mutS [Escherichia coli KTE181]
gi|432461720|ref|ZP_19703864.1| DNA mismatch repair protein mutS [Escherichia coli KTE204]
gi|432476948|ref|ZP_19718942.1| DNA mismatch repair protein mutS [Escherichia coli KTE208]
gi|432490536|ref|ZP_19732403.1| DNA mismatch repair protein mutS [Escherichia coli KTE213]
gi|432518817|ref|ZP_19756001.1| DNA mismatch repair protein mutS [Escherichia coli KTE228]
gi|432538987|ref|ZP_19775886.1| DNA mismatch repair protein mutS [Escherichia coli KTE235]
gi|432544335|ref|ZP_19781175.1| DNA mismatch repair protein mutS [Escherichia coli KTE236]
gi|432549825|ref|ZP_19786590.1| DNA mismatch repair protein mutS [Escherichia coli KTE237]
gi|432603390|ref|ZP_19839632.1| DNA mismatch repair protein mutS [Escherichia coli KTE66]
gi|432622927|ref|ZP_19858953.1| DNA mismatch repair protein mutS [Escherichia coli KTE76]
gi|432632485|ref|ZP_19868408.1| DNA mismatch repair protein mutS [Escherichia coli KTE80]
gi|432642197|ref|ZP_19878027.1| DNA mismatch repair protein mutS [Escherichia coli KTE83]
gi|432667191|ref|ZP_19902769.1| DNA mismatch repair protein mutS [Escherichia coli KTE116]
gi|432771648|ref|ZP_20005970.1| DNA mismatch repair protein mutS [Escherichia coli KTE50]
gi|432775775|ref|ZP_20010042.1| DNA mismatch repair protein mutS [Escherichia coli KTE54]
gi|432816422|ref|ZP_20050203.1| DNA mismatch repair protein mutS [Escherichia coli KTE115]
gi|432840560|ref|ZP_20074023.1| DNA mismatch repair protein mutS [Escherichia coli KTE140]
gi|432853862|ref|ZP_20082407.1| DNA mismatch repair protein mutS [Escherichia coli KTE144]
gi|432863813|ref|ZP_20087654.1| DNA mismatch repair protein mutS [Escherichia coli KTE146]
gi|432887823|ref|ZP_20101751.1| DNA mismatch repair protein mutS [Escherichia coli KTE158]
gi|432913987|ref|ZP_20119572.1| DNA mismatch repair protein mutS [Escherichia coli KTE190]
gi|432963071|ref|ZP_20152490.1| DNA mismatch repair protein mutS [Escherichia coli KTE202]
gi|433019804|ref|ZP_20207984.1| DNA mismatch repair protein mutS [Escherichia coli KTE105]
gi|433054367|ref|ZP_20241537.1| DNA mismatch repair protein mutS [Escherichia coli KTE122]
gi|433064138|ref|ZP_20251052.1| DNA mismatch repair protein mutS [Escherichia coli KTE125]
gi|433069014|ref|ZP_20255795.1| DNA mismatch repair protein mutS [Escherichia coli KTE128]
gi|433159752|ref|ZP_20344583.1| DNA mismatch repair protein mutS [Escherichia coli KTE177]
gi|433179556|ref|ZP_20363947.1| DNA mismatch repair protein mutS [Escherichia coli KTE82]
gi|433204460|ref|ZP_20388219.1| DNA mismatch repair protein mutS [Escherichia coli KTE95]
gi|226723059|sp|B7N6W4.1|MUTS_ECOLU RecName: Full=DNA mismatch repair protein MutS
gi|226723062|sp|B7LWH8.1|MUTS_ESCF3 RecName: Full=DNA mismatch repair protein MutS
gi|218355290|emb|CAQ87897.1| methyl-directed mismatch repair protein [Escherichia fergusonii
ATCC 35469]
gi|218433325|emb|CAR14225.1| methyl-directed mismatch repair protein [Escherichia coli UMN026]
gi|284922670|emb|CBG35758.1| DNA mismatch repair protein [Escherichia coli 042]
gi|291426232|gb|EFE99264.1| DNA mismatch repair protein mutS [Escherichia coli FVEC1412]
gi|298277103|gb|EFI18619.1| DNA mismatch repair protein mutS [Escherichia coli FVEC1302]
gi|300356484|gb|EFJ72354.1| DNA mismatch repair protein MutS [Escherichia coli MS 198-1]
gi|331058221|gb|EGI30202.1| DNA mismatch repair protein MutS [Escherichia coli TA143]
gi|331068337|gb|EGI39732.1| DNA mismatch repair protein MutS [Escherichia coli TA280]
gi|345334078|gb|EGW66523.1| DNA mismatch repair protein MutS [Escherichia coli STEC_C165-02]
gi|373247316|gb|EHP66762.1| DNA mismatch repair protein mutS [Escherichia coli 4_1_47FAA]
gi|388407915|gb|EIL68276.1| DNA mismatch repair protein MutS [Escherichia coli 576-1]
gi|430873548|gb|ELB97114.1| DNA mismatch repair protein mutS [Escherichia coli KTE2]
gi|430924580|gb|ELC45292.1| DNA mismatch repair protein mutS [Escherichia coli KTE26]
gi|430954295|gb|ELC73174.1| DNA mismatch repair protein mutS [Escherichia coli KTE181]
gi|430987994|gb|ELD04507.1| DNA mismatch repair protein mutS [Escherichia coli KTE204]
gi|431004098|gb|ELD19330.1| DNA mismatch repair protein mutS [Escherichia coli KTE208]
gi|431019237|gb|ELD32644.1| DNA mismatch repair protein mutS [Escherichia coli KTE213]
gi|431049850|gb|ELD59728.1| DNA mismatch repair protein mutS [Escherichia coli KTE228]
gi|431068365|gb|ELD76846.1| DNA mismatch repair protein mutS [Escherichia coli KTE235]
gi|431073270|gb|ELD80921.1| DNA mismatch repair protein mutS [Escherichia coli KTE236]
gi|431078993|gb|ELD85972.1| DNA mismatch repair protein mutS [Escherichia coli KTE237]
gi|431139749|gb|ELE41527.1| DNA mismatch repair protein mutS [Escherichia coli KTE66]
gi|431157955|gb|ELE58577.1| DNA mismatch repair protein mutS [Escherichia coli KTE76]
gi|431169050|gb|ELE69281.1| DNA mismatch repair protein mutS [Escherichia coli KTE80]
gi|431180152|gb|ELE80040.1| DNA mismatch repair protein mutS [Escherichia coli KTE83]
gi|431199603|gb|ELE98351.1| DNA mismatch repair protein mutS [Escherichia coli KTE116]
gi|431313653|gb|ELG01623.1| DNA mismatch repair protein mutS [Escherichia coli KTE50]
gi|431317032|gb|ELG04818.1| DNA mismatch repair protein mutS [Escherichia coli KTE54]
gi|431363302|gb|ELG49871.1| DNA mismatch repair protein mutS [Escherichia coli KTE115]
gi|431387863|gb|ELG71675.1| DNA mismatch repair protein mutS [Escherichia coli KTE140]
gi|431398277|gb|ELG81697.1| DNA mismatch repair protein mutS [Escherichia coli KTE144]
gi|431403678|gb|ELG86949.1| DNA mismatch repair protein mutS [Escherichia coli KTE146]
gi|431415301|gb|ELG97846.1| DNA mismatch repair protein mutS [Escherichia coli KTE158]
gi|431437934|gb|ELH19440.1| DNA mismatch repair protein mutS [Escherichia coli KTE190]
gi|431471646|gb|ELH51538.1| DNA mismatch repair protein mutS [Escherichia coli KTE202]
gi|431529416|gb|ELI06117.1| DNA mismatch repair protein mutS [Escherichia coli KTE105]
gi|431569165|gb|ELI42126.1| DNA mismatch repair protein mutS [Escherichia coli KTE122]
gi|431580025|gb|ELI52595.1| DNA mismatch repair protein mutS [Escherichia coli KTE125]
gi|431581907|gb|ELI54348.1| DNA mismatch repair protein mutS [Escherichia coli KTE128]
gi|431676137|gb|ELJ42260.1| DNA mismatch repair protein mutS [Escherichia coli KTE177]
gi|431699670|gb|ELJ64668.1| DNA mismatch repair protein mutS [Escherichia coli KTE82]
gi|431718613|gb|ELJ82684.1| DNA mismatch repair protein mutS [Escherichia coli KTE95]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|217967464|ref|YP_002352970.1| DNA mismatch repair protein MutS [Dictyoglomus turgidum DSM 6724]
gi|217336563|gb|ACK42356.1| DNA mismatch repair protein MutS [Dictyoglomus turgidum DSM 6724]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Composition-based stats.
Identities = 50/145 (34%), Positives = 81/145 (55%), Gaps = 19/145 (13%)
Query: 1 ILDSTALANLHVL-TNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILDSTA+ +L +L T + G+LI LD +TS G R+L+ L++PL N++AIK+RQ+
Sbjct: 263 ILDSTAIKHLELLETVREGQRRGSLIWVLDKTLTSMGARLLKKWLLQPLLNVNAIKKRQE 322
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMG 119
AI LD+ +M +K++ DLER+ ++ +++ T TP + I+ R
Sbjct: 323 AIKEFLDKDPWRREMEEILKEMPDLERI---NSRINYN---------TATPKELIYLRQA 370
Query: 120 ------AKDNLSGAQSTYLAELTES 138
+ +L A+S L EL E+
Sbjct: 371 LSFLPLLRKSLEKAESNRLKELKEN 395
Score = 56.2 bits (134), Expect = 4e-06, Method: Composition-based stats.
Identities = 28/71 (39%), Positives = 44/71 (61%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
R + L+ G +PA + VDRIFTR+GA D++S +ST+L E+ E I+ HA
Sbjct: 625 RQIALIIILAQMGSFIPAKEAKIGVVDRIFTRIGAWDDISSGESTFLVEMKEVGNILSHA 684
Query: 146 SKYSLALVDEL 156
++ SL ++DE+
Sbjct: 685 TERSLIILDEV 695
>gi|209920172|ref|YP_002294256.1| DNA mismatch repair protein MutS [Escherichia coli SE11]
gi|422355016|ref|ZP_16435739.1| DNA mismatch repair protein MutS [Escherichia coli MS 117-3]
gi|238058943|sp|B6I6B9.1|MUTS_ECOSE RecName: Full=DNA mismatch repair protein MutS
gi|209913431|dbj|BAG78505.1| DNA mismatch repair protein MutS [Escherichia coli SE11]
gi|324017000|gb|EGB86219.1| DNA mismatch repair protein MutS [Escherichia coli MS 117-3]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|194433013|ref|ZP_03065296.1| DNA mismatch repair protein MutS [Shigella dysenteriae 1012]
gi|417673672|ref|ZP_12323122.1| DNA mismatch repair protein MutS [Shigella dysenteriae 155-74]
gi|194418740|gb|EDX34826.1| DNA mismatch repair protein MutS [Shigella dysenteriae 1012]
gi|332088709|gb|EGI93822.1| DNA mismatch repair protein MutS [Shigella dysenteriae 155-74]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L + + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMTVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|52855220|gb|AAU88484.1| DNA mismatch repair protein [Escherichia coli]
Length = 191
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+
Sbjct: 72 MAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLM 131
Query: 154 DEL 156
DE+
Sbjct: 132 DEI 134
>gi|432617894|ref|ZP_19854004.1| DNA mismatch repair protein mutS [Escherichia coli KTE75]
gi|431152786|gb|ELE53712.1| DNA mismatch repair protein mutS [Escherichia coli KTE75]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|417708790|ref|ZP_12357818.1| DNA mismatch repair protein MutS [Shigella flexneri VA-6]
gi|332999477|gb|EGK19062.1| DNA mismatch repair protein MutS [Shigella flexneri VA-6]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|416274603|ref|ZP_11643722.1| DNA mismatch repair protein MutS [Shigella dysenteriae CDC 74-1112]
gi|320173418|gb|EFW48617.1| DNA mismatch repair protein MutS [Shigella dysenteriae CDC 74-1112]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T ++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAGLQPVLRQVGDLERIL 352
>gi|312796661|ref|YP_004029583.1| DNA mismatch repair protein mutS [Burkholderia rhizoxinica HKI 454]
gi|312168436|emb|CBW75439.1| DNA mismatch repair protein mutS [Burkholderia rhizoxinica HKI 454]
Length = 928
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPA PVDRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 675 TLMAYVGSYVPAKRACFGPVDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 734
Query: 152 LVDEL 156
L+DE+
Sbjct: 735 LMDEI 739
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD NL + T TL LD C TS G R+LR L N + RQ AI
Sbjct: 307 LDPATRRNLELTETLRGTDSPTLFSLLDACCTSMGSRLLRHWLHHAPRNPAVARARQQAI 366
Query: 62 SVLLD--QKHITEQMRAKMKDLRDLERM 87
LLD + + +R ++ + D+ER+
Sbjct: 367 GALLDGPPGNTLDALRHALRQIADVERI 394
>gi|187928086|ref|YP_001898573.1| DNA mismatch repair protein MutS [Ralstonia pickettii 12J]
gi|238691797|sp|B2U9E4.1|MUTS_RALPJ RecName: Full=DNA mismatch repair protein MutS
gi|187724976|gb|ACD26141.1| DNA mismatch repair protein MutS [Ralstonia pickettii 12J]
Length = 882
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPA++ + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 646 VLLAYVGAFVPAEAAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLV 705
Query: 152 LVDEL 156
L+DE+
Sbjct: 706 LMDEI 710
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + TL LD C TS G R+LR L PL + + RQ AI
Sbjct: 283 LDTATRRNLELTETLRGQESPTLFSLLDTCATSMGSRLLRHWLHHPLRDRAIPQARQQAI 342
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
VLL T +R+ ++ L D+ER+
Sbjct: 343 EVLLGGDWQT--LRSTLRTLSDVERI 366
>gi|145629590|ref|ZP_01785387.1| DNA mismatch repair protein [Haemophilus influenzae 22.1-21]
gi|144978101|gb|EDJ87874.1| DNA mismatch repair protein [Haemophilus influenzae 22.1-21]
Length = 861
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPAD+ + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 633 TLLAYIGSFVPADNARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ +I
Sbjct: 269 LDAATRRNLELTQNLAGGTENTLASVLDKCVTPMGSRLLKRWIHQPVRDVEKLKQRQQSI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 AEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|91212095|ref|YP_542081.1| DNA mismatch repair protein MutS [Escherichia coli UTI89]
gi|117624966|ref|YP_853954.1| DNA mismatch repair protein MutS [Escherichia coli APEC O1]
gi|218559724|ref|YP_002392637.1| DNA mismatch repair protein MutS [Escherichia coli S88]
gi|237706641|ref|ZP_04537122.1| DNA mismatch repair protein mutS [Escherichia sp. 3_2_53FAA]
gi|386600726|ref|YP_006102232.1| DNA mismatch repair protein MutS [Escherichia coli IHE3034]
gi|386603211|ref|YP_006109511.1| DNA mismatch repair protein MutS [Escherichia coli UM146]
gi|419003304|ref|ZP_13550823.1| DNA mismatch repair protein MutS [Escherichia coli DEC1B]
gi|419019674|ref|ZP_13566978.1| DNA mismatch repair protein MutS [Escherichia coli DEC1E]
gi|419025066|ref|ZP_13572289.1| DNA mismatch repair protein MutS [Escherichia coli DEC2A]
gi|419035899|ref|ZP_13582982.1| DNA mismatch repair protein MutS [Escherichia coli DEC2D]
gi|419944687|ref|ZP_14461162.1| DNA mismatch repair protein MutS [Escherichia coli HM605]
gi|422356936|ref|ZP_16437609.1| DNA mismatch repair protein MutS [Escherichia coli MS 110-3]
gi|422750247|ref|ZP_16804158.1| DNA mismatch repair protein MutS [Escherichia coli H252]
gi|422754500|ref|ZP_16808326.1| DNA mismatch repair protein MutS [Escherichia coli H263]
gi|422840721|ref|ZP_16888691.1| DNA mismatch repair protein mutS [Escherichia coli H397]
gi|432363899|ref|ZP_19607057.1| DNA mismatch repair protein mutS [Escherichia coli KTE5]
gi|432574905|ref|ZP_19811380.1| DNA mismatch repair protein mutS [Escherichia coli KTE55]
gi|432589034|ref|ZP_19825388.1| DNA mismatch repair protein mutS [Escherichia coli KTE58]
gi|432598882|ref|ZP_19835153.1| DNA mismatch repair protein mutS [Escherichia coli KTE62]
gi|432755586|ref|ZP_19990132.1| DNA mismatch repair protein mutS [Escherichia coli KTE22]
gi|432779666|ref|ZP_20013888.1| DNA mismatch repair protein mutS [Escherichia coli KTE59]
gi|432788658|ref|ZP_20022786.1| DNA mismatch repair protein mutS [Escherichia coli KTE65]
gi|432822094|ref|ZP_20055784.1| DNA mismatch repair protein mutS [Escherichia coli KTE118]
gi|432823604|ref|ZP_20057274.1| DNA mismatch repair protein mutS [Escherichia coli KTE123]
gi|433006186|ref|ZP_20194612.1| DNA mismatch repair protein mutS [Escherichia coli KTE227]
gi|433008854|ref|ZP_20197268.1| DNA mismatch repair protein mutS [Escherichia coli KTE229]
gi|433154804|ref|ZP_20339740.1| DNA mismatch repair protein mutS [Escherichia coli KTE176]
gi|433164689|ref|ZP_20349422.1| DNA mismatch repair protein mutS [Escherichia coli KTE179]
gi|433169676|ref|ZP_20354299.1| DNA mismatch repair protein mutS [Escherichia coli KTE180]
gi|122422701|sp|Q1R7W4.1|MUTS_ECOUT RecName: Full=DNA mismatch repair protein MutS
gi|166232121|sp|A1AES5.1|MUTS_ECOK1 RecName: Full=DNA mismatch repair protein MutS
gi|226723056|sp|B7MKK5.1|MUTS_ECO45 RecName: Full=DNA mismatch repair protein MutS
gi|91073669|gb|ABE08550.1| DNA mismatch repair protein MutS [Escherichia coli UTI89]
gi|115514090|gb|ABJ02165.1| DNA mismatch repair protein MutS [Escherichia coli APEC O1]
gi|218366493|emb|CAR04245.1| methyl-directed mismatch repair protein [Escherichia coli S88]
gi|226899681|gb|EEH85940.1| DNA mismatch repair protein mutS [Escherichia sp. 3_2_53FAA]
gi|294490962|gb|ADE89718.1| DNA mismatch repair protein MutS [Escherichia coli IHE3034]
gi|307625695|gb|ADN69999.1| DNA mismatch repair protein MutS [Escherichia coli UM146]
gi|315289268|gb|EFU48663.1| DNA mismatch repair protein MutS [Escherichia coli MS 110-3]
gi|323951047|gb|EGB46923.1| DNA mismatch repair protein MutS [Escherichia coli H252]
gi|323957054|gb|EGB52779.1| DNA mismatch repair protein MutS [Escherichia coli H263]
gi|371605732|gb|EHN94340.1| DNA mismatch repair protein mutS [Escherichia coli H397]
gi|377845796|gb|EHU10815.1| DNA mismatch repair protein MutS [Escherichia coli DEC1B]
gi|377858834|gb|EHU23672.1| DNA mismatch repair protein MutS [Escherichia coli DEC1E]
gi|377862424|gb|EHU27236.1| DNA mismatch repair protein MutS [Escherichia coli DEC2A]
gi|377878417|gb|EHU43004.1| DNA mismatch repair protein MutS [Escherichia coli DEC2D]
gi|388418078|gb|EIL77900.1| DNA mismatch repair protein MutS [Escherichia coli HM605]
gi|430884355|gb|ELC07295.1| DNA mismatch repair protein mutS [Escherichia coli KTE5]
gi|431106435|gb|ELE10643.1| DNA mismatch repair protein mutS [Escherichia coli KTE55]
gi|431119057|gb|ELE22072.1| DNA mismatch repair protein mutS [Escherichia coli KTE58]
gi|431128752|gb|ELE30928.1| DNA mismatch repair protein mutS [Escherichia coli KTE62]
gi|431300890|gb|ELF90437.1| DNA mismatch repair protein mutS [Escherichia coli KTE22]
gi|431325581|gb|ELG12964.1| DNA mismatch repair protein mutS [Escherichia coli KTE59]
gi|431335658|gb|ELG22787.1| DNA mismatch repair protein mutS [Escherichia coli KTE65]
gi|431367163|gb|ELG53649.1| DNA mismatch repair protein mutS [Escherichia coli KTE118]
gi|431378129|gb|ELG63120.1| DNA mismatch repair protein mutS [Escherichia coli KTE123]
gi|431512554|gb|ELH90645.1| DNA mismatch repair protein mutS [Escherichia coli KTE227]
gi|431522593|gb|ELH99825.1| DNA mismatch repair protein mutS [Escherichia coli KTE229]
gi|431672830|gb|ELJ39064.1| DNA mismatch repair protein mutS [Escherichia coli KTE176]
gi|431685520|gb|ELJ51090.1| DNA mismatch repair protein mutS [Escherichia coli KTE179]
gi|431685952|gb|ELJ51518.1| DNA mismatch repair protein mutS [Escherichia coli KTE180]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|52698260|gb|AAU86867.1| DNA mismatch repair protein [Shigella flexneri 2a]
Length = 187
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+
Sbjct: 71 MAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLM 130
Query: 154 DEL 156
DE+
Sbjct: 131 DEI 133
>gi|52698278|gb|AAU86876.1| DNA mismatch repair protein [Escherichia coli]
gi|52698288|gb|AAU86881.1| DNA mismatch repair protein [Escherichia coli]
gi|52698290|gb|AAU86882.1| DNA mismatch repair protein [Escherichia coli]
Length = 197
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+
Sbjct: 71 MAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLM 130
Query: 154 DEL 156
DE+
Sbjct: 131 DEI 133
>gi|444970759|ref|ZP_21288121.1| DNA mismatch repair protein MutS [Escherichia coli 99.1793]
gi|444578556|gb|ELV54610.1| DNA mismatch repair protein MutS [Escherichia coli 99.1793]
Length = 840
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 619 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 678
Query: 153 VDEL 156
+DE+
Sbjct: 679 MDEI 682
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 255 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 314
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 315 IGALQD---FTAELQPVLRQVGDLERIL 339
>gi|432418177|ref|ZP_19660774.1| DNA mismatch repair protein mutS [Escherichia coli KTE44]
gi|430938018|gb|ELC58267.1| DNA mismatch repair protein mutS [Escherichia coli KTE44]
Length = 855
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 634 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 693
Query: 153 VDEL 156
+DE+
Sbjct: 694 MDEI 697
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 270 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T ++ ++ + DLER+L
Sbjct: 330 IGALQD---FTAGLQPVLRQVGDLERIL 354
>gi|419330255|ref|ZP_13871855.1| DNA mismatch repair protein MutS [Escherichia coli DEC12C]
gi|378168730|gb|EHX29633.1| DNA mismatch repair protein MutS [Escherichia coli DEC12C]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|419132748|ref|ZP_13677582.1| DNA mismatch repair protein MutS [Escherichia coli DEC5D]
gi|377974173|gb|EHV37501.1| DNA mismatch repair protein MutS [Escherichia coli DEC5D]
Length = 841
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 620 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 679
Query: 153 VDEL 156
+DE+
Sbjct: 680 MDEI 683
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 256 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 316 IGALQD---FTAELQPVLRQVGDLERIL 340
>gi|419030223|ref|ZP_13577379.1| DNA mismatch repair protein MutS [Escherichia coli DEC2C]
gi|419040910|ref|ZP_13587932.1| DNA mismatch repair protein MutS [Escherichia coli DEC2E]
gi|377875600|gb|EHU40209.1| DNA mismatch repair protein MutS [Escherichia coli DEC2C]
gi|377888012|gb|EHU52484.1| DNA mismatch repair protein MutS [Escherichia coli DEC2E]
Length = 841
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 620 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 679
Query: 153 VDEL 156
+DE+
Sbjct: 680 MDEI 683
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 256 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 316 IGALQD---FTAELQPVLRQVGDLERIL 340
>gi|416282392|ref|ZP_11646403.1| DNA mismatch repair protein MutS [Shigella boydii ATCC 9905]
gi|320180836|gb|EFW55759.1| DNA mismatch repair protein MutS [Shigella boydii ATCC 9905]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|373950463|ref|ZP_09610424.1| DNA mismatch repair protein mutS [Shewanella baltica OS183]
gi|386323700|ref|YP_006019817.1| DNA mismatch repair protein mutS [Shewanella baltica BA175]
gi|333817845|gb|AEG10511.1| DNA mismatch repair protein mutS [Shewanella baltica BA175]
gi|373887063|gb|EHQ15955.1| DNA mismatch repair protein mutS [Shewanella baltica OS183]
Length = 856
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ GC VPAD + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL
Sbjct: 635 TLMAHIGCFVPADHALIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATASSLV 694
Query: 152 LVDEL 156
L+DE+
Sbjct: 695 LMDEI 699
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 49/91 (53%), Gaps = 7/91 (7%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N + TL LD+ T G RML+ + +PL + IK RQ A
Sbjct: 270 VLDAATRRNLELTQNLAGGRDNTLAAVLDNTATPMGSRMLQRWIHQPLRDPKHIKARQQA 329
Query: 61 ISVLLD---QKHITEQMRAKMKDLRDLERML 88
++ LLD + + EQ+RA L D+ER++
Sbjct: 330 VTELLDTAAHEGLHEQLRA----LGDIERIM 356
>gi|293415983|ref|ZP_06658623.1| DNA mismatch repair protein MutS [Escherichia coli B185]
gi|291432172|gb|EFF05154.1| DNA mismatch repair protein MutS [Escherichia coli B185]
Length = 853
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T ++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAGLQPVLRQVGDLERIL 352
>gi|52698252|gb|AAU86863.1| DNA mismatch repair protein [Shigella boydii]
Length = 197
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+
Sbjct: 71 MAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLM 130
Query: 154 DEL 156
DE+
Sbjct: 131 DEI 133
>gi|52698216|gb|AAU86845.1| DNA mismatch repair protein [Escherichia coli]
gi|52698218|gb|AAU86846.1| DNA mismatch repair protein [Escherichia coli]
gi|52855236|gb|AAU88492.1| DNA mismatch repair protein [Escherichia coli]
Length = 194
Score = 70.9 bits (172), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 69 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 128
Query: 153 VDEL 156
+DE+
Sbjct: 129 MDEI 132
>gi|432889971|ref|ZP_20103017.1| DNA mismatch repair protein mutS [Escherichia coli KTE165]
gi|431432845|gb|ELH14521.1| DNA mismatch repair protein mutS [Escherichia coli KTE165]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|417829148|ref|ZP_12475696.1| DNA mismatch repair protein MutS [Shigella flexneri J1713]
gi|419382006|ref|ZP_13922952.1| DNA mismatch repair protein MutS [Escherichia coli DEC14C]
gi|419927137|ref|ZP_14444875.1| DNA mismatch repair protein MutS [Escherichia coli 541-1]
gi|420271147|ref|ZP_14773501.1| DNA mismatch repair protein MutS [Escherichia coli PA22]
gi|421813718|ref|ZP_16249430.1| DNA mismatch repair protein MutS [Escherichia coli 8.0416]
gi|424117168|ref|ZP_17851007.1| DNA mismatch repair protein MutS [Escherichia coli PA3]
gi|424123349|ref|ZP_17856671.1| DNA mismatch repair protein MutS [Escherichia coli PA5]
gi|424142368|ref|ZP_17874250.1| DNA mismatch repair protein MutS [Escherichia coli PA14]
gi|424457242|ref|ZP_17908374.1| DNA mismatch repair protein MutS [Escherichia coli PA33]
gi|424539709|ref|ZP_17982653.1| DNA mismatch repair protein MutS [Escherichia coli EC4013]
gi|424576859|ref|ZP_18016926.1| DNA mismatch repair protein MutS [Escherichia coli EC1845]
gi|425099360|ref|ZP_18502092.1| DNA mismatch repair protein MutS [Escherichia coli 3.4870]
gi|425111471|ref|ZP_18513392.1| DNA mismatch repair protein MutS [Escherichia coli 6.0172]
gi|425169505|ref|ZP_18567979.1| DNA mismatch repair protein MutS [Escherichia coli FDA507]
gi|425175568|ref|ZP_18573688.1| DNA mismatch repair protein MutS [Escherichia coli FDA504]
gi|425181599|ref|ZP_18579295.1| DNA mismatch repair protein MutS [Escherichia coli FRIK1999]
gi|425201111|ref|ZP_18597320.1| DNA mismatch repair protein MutS [Escherichia coli NE037]
gi|425207497|ref|ZP_18603294.1| DNA mismatch repair protein MutS [Escherichia coli FRIK2001]
gi|425232185|ref|ZP_18626226.1| DNA mismatch repair protein MutS [Escherichia coli PA45]
gi|425312711|ref|ZP_18701894.1| DNA mismatch repair protein MutS [Escherichia coli EC1735]
gi|425318699|ref|ZP_18707490.1| DNA mismatch repair protein MutS [Escherichia coli EC1736]
gi|425343652|ref|ZP_18730543.1| DNA mismatch repair protein MutS [Escherichia coli EC1848]
gi|425349457|ref|ZP_18735928.1| DNA mismatch repair protein MutS [Escherichia coli EC1849]
gi|428948419|ref|ZP_19020699.1| DNA mismatch repair protein MutS [Escherichia coli 88.1467]
gi|429015981|ref|ZP_19082874.1| DNA mismatch repair protein MutS [Escherichia coli 95.0943]
gi|429051426|ref|ZP_19115994.1| DNA mismatch repair protein MutS [Escherichia coli 97.0003]
gi|429834132|ref|ZP_19364473.1| DNA mismatch repair protein MutS [Escherichia coli 97.0010]
gi|444937431|ref|ZP_21256207.1| DNA mismatch repair protein MutS [Escherichia coli 99.0815]
gi|444948480|ref|ZP_21266791.1| DNA mismatch repair protein MutS [Escherichia coli 99.0839]
gi|444981438|ref|ZP_21298348.1| DNA mismatch repair protein MutS [Escherichia coli ATCC 700728]
gi|445035680|ref|ZP_21351211.1| DNA mismatch repair protein MutS [Escherichia coli 99.1762]
gi|445052086|ref|ZP_21367127.1| DNA mismatch repair protein MutS [Escherichia coli 95.0083]
gi|335574447|gb|EGM60773.1| DNA mismatch repair protein MutS [Shigella flexneri J1713]
gi|378226502|gb|EHX86688.1| DNA mismatch repair protein MutS [Escherichia coli DEC14C]
gi|388407975|gb|EIL68335.1| DNA mismatch repair protein MutS [Escherichia coli 541-1]
gi|390676039|gb|EIN52154.1| DNA mismatch repair protein MutS [Escherichia coli PA3]
gi|390679560|gb|EIN55455.1| DNA mismatch repair protein MutS [Escherichia coli PA5]
gi|390699986|gb|EIN74322.1| DNA mismatch repair protein MutS [Escherichia coli PA14]
gi|390713483|gb|EIN86421.1| DNA mismatch repair protein MutS [Escherichia coli PA22]
gi|390744315|gb|EIO15217.1| DNA mismatch repair protein MutS [Escherichia coli PA33]
gi|390864347|gb|EIP26455.1| DNA mismatch repair protein MutS [Escherichia coli EC4013]
gi|390919308|gb|EIP77662.1| DNA mismatch repair protein MutS [Escherichia coli EC1845]
gi|408081483|gb|EKH15490.1| DNA mismatch repair protein MutS [Escherichia coli FDA507]
gi|408090163|gb|EKH23440.1| DNA mismatch repair protein MutS [Escherichia coli FDA504]
gi|408096594|gb|EKH29529.1| DNA mismatch repair protein MutS [Escherichia coli FRIK1999]
gi|408114347|gb|EKH45909.1| DNA mismatch repair protein MutS [Escherichia coli NE037]
gi|408120183|gb|EKH51207.1| DNA mismatch repair protein MutS [Escherichia coli FRIK2001]
gi|408145261|gb|EKH74439.1| DNA mismatch repair protein MutS [Escherichia coli PA45]
gi|408225891|gb|EKI49551.1| DNA mismatch repair protein MutS [Escherichia coli EC1735]
gi|408237286|gb|EKI60146.1| DNA mismatch repair protein MutS [Escherichia coli EC1736]
gi|408257996|gb|EKI79284.1| DNA mismatch repair protein MutS [Escherichia coli EC1848]
gi|408264804|gb|EKI85593.1| DNA mismatch repair protein MutS [Escherichia coli EC1849]
gi|408547985|gb|EKK25370.1| DNA mismatch repair protein MutS [Escherichia coli 3.4870]
gi|408549460|gb|EKK26820.1| DNA mismatch repair protein MutS [Escherichia coli 6.0172]
gi|408600085|gb|EKK73944.1| DNA mismatch repair protein MutS [Escherichia coli 8.0416]
gi|427206976|gb|EKV77154.1| DNA mismatch repair protein MutS [Escherichia coli 88.1467]
gi|427260206|gb|EKW26197.1| DNA mismatch repair protein MutS [Escherichia coli 95.0943]
gi|427299697|gb|EKW62666.1| DNA mismatch repair protein MutS [Escherichia coli 97.0003]
gi|429254572|gb|EKY38983.1| DNA mismatch repair protein MutS [Escherichia coli 97.0010]
gi|444546980|gb|ELV25635.1| DNA mismatch repair protein MutS [Escherichia coli 99.0815]
gi|444556748|gb|ELV34139.1| DNA mismatch repair protein MutS [Escherichia coli 99.0839]
gi|444592277|gb|ELV67536.1| DNA mismatch repair protein MutS [Escherichia coli ATCC 700728]
gi|444644377|gb|ELW17496.1| DNA mismatch repair protein MutS [Escherichia coli 99.1762]
gi|444662997|gb|ELW35244.1| DNA mismatch repair protein MutS [Escherichia coli 95.0083]
Length = 841
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 620 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 679
Query: 153 VDEL 156
+DE+
Sbjct: 680 MDEI 683
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 256 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 316 IGALQD---FTAELQPVLRQVGDLERIL 340
>gi|420374817|ref|ZP_14874755.1| DNA mismatch repair protein MutS [Shigella flexneri 1235-66]
gi|391315813|gb|EIQ73329.1| DNA mismatch repair protein MutS [Shigella flexneri 1235-66]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|417269476|ref|ZP_12056836.1| DNA mismatch repair protein MutS [Escherichia coli 3.3884]
gi|386228281|gb|EII55637.1| DNA mismatch repair protein MutS [Escherichia coli 3.3884]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|419273976|ref|ZP_13816268.1| DNA mismatch repair protein MutS [Escherichia coli DEC10D]
gi|378115196|gb|EHW76743.1| DNA mismatch repair protein MutS [Escherichia coli DEC10D]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|418025433|ref|ZP_12664411.1| DNA mismatch repair protein mutS [Shewanella baltica OS625]
gi|353535045|gb|EHC04609.1| DNA mismatch repair protein mutS [Shewanella baltica OS625]
Length = 856
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ GC VPAD + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL
Sbjct: 635 TLMAHIGCFVPADRALIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATASSLV 694
Query: 152 LVDEL 156
L+DE+
Sbjct: 695 LMDEI 699
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N + TL LD+ T G RML+ + +PL + IK RQ A
Sbjct: 270 VLDAATRRNLELTQNLAGGRDNTLAAVLDNTATPMGSRMLQRWIHQPLRDPKHIKARQQA 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
++ LLD E + ++K L D+ER++
Sbjct: 330 VTELLDTT-AHEGLHEQLKALGDIERIM 356
>gi|262273679|ref|ZP_06051492.1| DNA mismatch repair protein MutS [Grimontia hollisae CIP 101886]
gi|262222094|gb|EEY73406.1| DNA mismatch repair protein MutS [Grimontia hollisae CIP 101886]
Length = 870
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ G VPA+S T+ PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 646 TLMAHIGSYVPAESATMGPVDRIFTRIGASDDLASGRSTFMVEMTETANILHNATENSLV 705
Query: 152 LVDEL 156
L+DE+
Sbjct: 706 LMDEI 710
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 45/88 (51%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N E TL LD T G R+L+ L +P+ + + +R DA
Sbjct: 281 ILDAATRRNLELTQNLSGGLENTLASVLDRTTTPMGSRLLKRWLHQPMRDFKIVNRRLDA 340
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I+ L D + + A ++ + D+ER+L
Sbjct: 341 ITALKDTGLYVD-LAAALRPVGDMERIL 367
>gi|52855218|gb|AAU88483.1| DNA mismatch repair protein [Escherichia coli]
Length = 197
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+
Sbjct: 72 MAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLM 131
Query: 154 DEL 156
DE+
Sbjct: 132 DEI 134
>gi|52698280|gb|AAU86877.1| DNA mismatch repair protein [Escherichia coli]
Length = 197
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+
Sbjct: 72 MAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLM 131
Query: 154 DEL 156
DE+
Sbjct: 132 DEI 134
>gi|52698226|gb|AAU86850.1| DNA mismatch repair protein [Shigella flexneri]
gi|52855246|gb|AAU88497.1| DNA mismatch repair protein [Escherichia coli]
Length = 191
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 66 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 125
Query: 153 VDEL 156
+DE+
Sbjct: 126 MDEI 129
>gi|52698248|gb|AAU86861.1| DNA mismatch repair protein [Shigella dysenteriae]
Length = 194
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+
Sbjct: 69 MAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLM 128
Query: 154 DEL 156
DE+
Sbjct: 129 DEI 131
>gi|52698270|gb|AAU86872.1| DNA mismatch repair protein [Escherichia coli]
Length = 193
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 68 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 127
Query: 153 VDEL 156
+DE+
Sbjct: 128 MDEI 131
>gi|432719842|ref|ZP_19954808.1| DNA mismatch repair protein mutS [Escherichia coli KTE9]
gi|431261345|gb|ELF53384.1| DNA mismatch repair protein mutS [Escherichia coli KTE9]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|432675821|ref|ZP_19911276.1| DNA mismatch repair protein mutS [Escherichia coli KTE142]
gi|431212996|gb|ELF10915.1| DNA mismatch repair protein mutS [Escherichia coli KTE142]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|82545194|ref|YP_409141.1| DNA mismatch repair protein MutS [Shigella boydii Sb227]
gi|187734248|ref|YP_001881523.1| DNA mismatch repair protein MutS [Shigella boydii CDC 3083-94]
gi|416294492|ref|ZP_11650916.1| DNA mismatch repair protein MutS [Shigella flexneri CDC 796-83]
gi|420354226|ref|ZP_14855314.1| DNA mismatch repair protein MutS [Shigella boydii 4444-74]
gi|421683896|ref|ZP_16123686.1| DNA mismatch repair protein MutS [Shigella flexneri 1485-80]
gi|90109856|sp|Q31X95.1|MUTS_SHIBS RecName: Full=DNA mismatch repair protein MutS
gi|238691751|sp|B2TZJ7.1|MUTS_SHIB3 RecName: Full=DNA mismatch repair protein MutS
gi|81246605|gb|ABB67313.1| methyl-directed mismatch repair [Shigella boydii Sb227]
gi|187431240|gb|ACD10514.1| DNA mismatch repair protein MutS [Shigella boydii CDC 3083-94]
gi|320186517|gb|EFW61245.1| DNA mismatch repair protein MutS [Shigella flexneri CDC 796-83]
gi|391276153|gb|EIQ34929.1| DNA mismatch repair protein MutS [Shigella boydii 4444-74]
gi|404337541|gb|EJZ63994.1| DNA mismatch repair protein MutS [Shigella flexneri 1485-80]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T ++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAGLQPVLRQVGDLERIL 352
>gi|15832843|ref|NP_311616.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
Sakai]
gi|168749939|ref|ZP_02774961.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC4113]
gi|168755480|ref|ZP_02780487.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC4401]
gi|168768827|ref|ZP_02793834.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC4486]
gi|168774732|ref|ZP_02799739.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC4196]
gi|168778718|ref|ZP_02803725.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC4076]
gi|168787991|ref|ZP_02812998.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC869]
gi|168800184|ref|ZP_02825191.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC508]
gi|188493251|ref|ZP_03000521.1| DNA mismatch repair protein MutS [Escherichia coli 53638]
gi|191166787|ref|ZP_03028613.1| DNA mismatch repair protein MutS [Escherichia coli B7A]
gi|193069637|ref|ZP_03050589.1| DNA mismatch repair protein MutS [Escherichia coli E110019]
gi|195938486|ref|ZP_03083868.1| DNA mismatch repair protein [Escherichia coli O157:H7 str. EC4024]
gi|208807935|ref|ZP_03250272.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC4206]
gi|208814135|ref|ZP_03255464.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC4045]
gi|208819414|ref|ZP_03259734.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC4042]
gi|209399182|ref|YP_002272198.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC4115]
gi|218555277|ref|YP_002388190.1| DNA mismatch repair protein MutS [Escherichia coli IAI1]
gi|254794675|ref|YP_003079512.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
TW14359]
gi|261226029|ref|ZP_05940310.1| methyl-directed mismatch repair protein [Escherichia coli O157:H7
str. FRIK2000]
gi|261256714|ref|ZP_05949247.1| methyl-directed mismatch repair protein [Escherichia coli O157:H7
str. FRIK966]
gi|291284062|ref|YP_003500880.1| DNA mismatch repair protein mutS [Escherichia coli O55:H7 str.
CB9615]
gi|293449050|ref|ZP_06663471.1| DNA mismatch repair protein MutS [Escherichia coli B088]
gi|300815861|ref|ZP_07096085.1| DNA mismatch repair protein MutS [Escherichia coli MS 107-1]
gi|300820510|ref|ZP_07100661.1| DNA mismatch repair protein MutS [Escherichia coli MS 119-7]
gi|307312843|ref|ZP_07592473.1| DNA mismatch repair protein MutS [Escherichia coli W]
gi|331654213|ref|ZP_08355213.1| DNA mismatch repair protein MutS [Escherichia coli M718]
gi|331669468|ref|ZP_08370314.1| DNA mismatch repair protein MutS [Escherichia coli TA271]
gi|331678709|ref|ZP_08379383.1| DNA mismatch repair protein MutS [Escherichia coli H591]
gi|332280608|ref|ZP_08393021.1| methyl-directed mismatch repair protein [Shigella sp. D9]
gi|378711846|ref|YP_005276739.1| DNA mismatch repair protein MutS [Escherichia coli KO11FL]
gi|386610093|ref|YP_006125579.1| methyl-directed mismatch repair protein [Escherichia coli W]
gi|386700358|ref|YP_006164195.1| DNA mismatch repair protein MutS [Escherichia coli KO11FL]
gi|386710585|ref|YP_006174306.1| DNA mismatch repair protein MutS [Escherichia coli W]
gi|387883914|ref|YP_006314216.1| DNA mismatch repair protein MutS [Escherichia coli Xuzhou21]
gi|415875564|ref|ZP_11542268.1| DNA mismatch repair protein MutS [Escherichia coli MS 79-10]
gi|416314662|ref|ZP_11658897.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
1044]
gi|416327623|ref|ZP_11667543.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
1125]
gi|416776839|ref|ZP_11874873.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
G5101]
gi|416788267|ref|ZP_11879799.1| DNA mismatch repair protein MutS [Escherichia coli O157:H- str.
493-89]
gi|416800232|ref|ZP_11884711.1| DNA mismatch repair protein MutS [Escherichia coli O157:H- str. H
2687]
gi|416810797|ref|ZP_11889475.1| DNA mismatch repair protein MutS [Escherichia coli O55:H7 str.
3256-97]
gi|416821511|ref|ZP_11894125.1| DNA mismatch repair protein MutS [Escherichia coli O55:H7 str. USDA
5905]
gi|416831874|ref|ZP_11899221.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
LSU-61]
gi|417134659|ref|ZP_11979444.1| DNA mismatch repair protein MutS [Escherichia coli 5.0588]
gi|417158330|ref|ZP_11995954.1| DNA mismatch repair protein MutS [Escherichia coli 96.0497]
gi|417582209|ref|ZP_12233010.1| DNA mismatch repair protein MutS [Escherichia coli STEC_B2F1]
gi|417668111|ref|ZP_12317653.1| DNA mismatch repair protein MutS [Escherichia coli STEC_O31]
gi|417690940|ref|ZP_12340159.1| DNA mismatch repair protein MutS [Shigella boydii 5216-82]
gi|419046818|ref|ZP_13593753.1| DNA mismatch repair protein MutS [Escherichia coli DEC3A]
gi|419052456|ref|ZP_13599323.1| DNA mismatch repair protein MutS [Escherichia coli DEC3B]
gi|419058447|ref|ZP_13605250.1| DNA mismatch repair protein MutS [Escherichia coli DEC3C]
gi|419063941|ref|ZP_13610666.1| DNA mismatch repair protein MutS [Escherichia coli DEC3D]
gi|419070890|ref|ZP_13616505.1| DNA mismatch repair protein MutS [Escherichia coli DEC3E]
gi|419076720|ref|ZP_13622226.1| DNA mismatch repair protein MutS [Escherichia coli DEC3F]
gi|419081914|ref|ZP_13627361.1| DNA mismatch repair protein MutS [Escherichia coli DEC4A]
gi|419087750|ref|ZP_13633103.1| DNA mismatch repair protein MutS [Escherichia coli DEC4B]
gi|419094003|ref|ZP_13639285.1| DNA mismatch repair protein MutS [Escherichia coli DEC4C]
gi|419099552|ref|ZP_13644746.1| DNA mismatch repair protein MutS [Escherichia coli DEC4D]
gi|419110727|ref|ZP_13655781.1| DNA mismatch repair protein MutS [Escherichia coli DEC4F]
gi|419121785|ref|ZP_13666732.1| DNA mismatch repair protein MutS [Escherichia coli DEC5B]
gi|419137871|ref|ZP_13682662.1| DNA mismatch repair protein MutS [Escherichia coli DEC5E]
gi|419279233|ref|ZP_13821477.1| DNA mismatch repair protein MutS [Escherichia coli DEC10E]
gi|419346398|ref|ZP_13887769.1| DNA mismatch repair protein MutS [Escherichia coli DEC13A]
gi|419350860|ref|ZP_13892193.1| DNA mismatch repair protein MutS [Escherichia coli DEC13B]
gi|419356265|ref|ZP_13897518.1| DNA mismatch repair protein MutS [Escherichia coli DEC13C]
gi|419361336|ref|ZP_13902549.1| DNA mismatch repair protein MutS [Escherichia coli DEC13D]
gi|419366398|ref|ZP_13907554.1| DNA mismatch repair protein MutS [Escherichia coli DEC13E]
gi|419371193|ref|ZP_13912308.1| DNA mismatch repair protein MutS [Escherichia coli DEC14A]
gi|419376692|ref|ZP_13917715.1| DNA mismatch repair protein MutS [Escherichia coli DEC14B]
gi|419387348|ref|ZP_13928222.1| DNA mismatch repair protein MutS [Escherichia coli DEC14D]
gi|419805121|ref|ZP_14330265.1| DNA mismatch repair protein MutS [Escherichia coli AI27]
gi|420276738|ref|ZP_14779020.1| DNA mismatch repair protein MutS [Escherichia coli PA40]
gi|420282436|ref|ZP_14784669.1| DNA mismatch repair protein MutS [Escherichia coli TW06591]
gi|420288404|ref|ZP_14790588.1| DNA mismatch repair protein MutS [Escherichia coli TW10246]
gi|420293734|ref|ZP_14795849.1| DNA mismatch repair protein MutS [Escherichia coli TW11039]
gi|420299651|ref|ZP_14801697.1| DNA mismatch repair protein MutS [Escherichia coli TW09109]
gi|420305608|ref|ZP_14807598.1| DNA mismatch repair protein MutS [Escherichia coli TW10119]
gi|420310892|ref|ZP_14812822.1| DNA mismatch repair protein MutS [Escherichia coli EC1738]
gi|420316496|ref|ZP_14818369.1| DNA mismatch repair protein MutS [Escherichia coli EC1734]
gi|420321681|ref|ZP_14823506.1| DNA mismatch repair protein MutS [Shigella flexneri 2850-71]
gi|421819541|ref|ZP_16255032.1| DNA mismatch repair protein MutS [Escherichia coli 10.0821]
gi|421825547|ref|ZP_16260902.1| DNA mismatch repair protein MutS [Escherichia coli FRIK920]
gi|421832244|ref|ZP_16267528.1| DNA mismatch repair protein MutS [Escherichia coli PA7]
gi|422760182|ref|ZP_16813942.1| DNA mismatch repair protein MutS [Escherichia coli E1167]
gi|422767759|ref|ZP_16821485.1| DNA mismatch repair protein MutS [Escherichia coli E1520]
gi|422776052|ref|ZP_16829707.1| DNA mismatch repair protein MutS [Escherichia coli H120]
gi|423706887|ref|ZP_17681270.1| DNA mismatch repair protein mutS [Escherichia coli B799]
gi|423726526|ref|ZP_17700533.1| DNA mismatch repair protein MutS [Escherichia coli PA31]
gi|424078831|ref|ZP_17815812.1| DNA mismatch repair protein MutS [Escherichia coli FDA505]
gi|424085292|ref|ZP_17821788.1| DNA mismatch repair protein MutS [Escherichia coli FDA517]
gi|424091706|ref|ZP_17827640.1| DNA mismatch repair protein MutS [Escherichia coli FRIK1996]
gi|424098338|ref|ZP_17833641.1| DNA mismatch repair protein MutS [Escherichia coli FRIK1985]
gi|424104571|ref|ZP_17839334.1| DNA mismatch repair protein MutS [Escherichia coli FRIK1990]
gi|424111232|ref|ZP_17845468.1| DNA mismatch repair protein MutS [Escherichia coli 93-001]
gi|424129509|ref|ZP_17862417.1| DNA mismatch repair protein MutS [Escherichia coli PA9]
gi|424135819|ref|ZP_17868282.1| DNA mismatch repair protein MutS [Escherichia coli PA10]
gi|424148784|ref|ZP_17880160.1| DNA mismatch repair protein MutS [Escherichia coli PA15]
gi|424154609|ref|ZP_17885559.1| DNA mismatch repair protein MutS [Escherichia coli PA24]
gi|424252452|ref|ZP_17891118.1| DNA mismatch repair protein MutS [Escherichia coli PA25]
gi|424330488|ref|ZP_17897025.1| DNA mismatch repair protein MutS [Escherichia coli PA28]
gi|424451047|ref|ZP_17902744.1| DNA mismatch repair protein MutS [Escherichia coli PA32]
gi|424463687|ref|ZP_17914110.1| DNA mismatch repair protein MutS [Escherichia coli PA39]
gi|424470010|ref|ZP_17919833.1| DNA mismatch repair protein MutS [Escherichia coli PA41]
gi|424476530|ref|ZP_17925848.1| DNA mismatch repair protein MutS [Escherichia coli PA42]
gi|424482291|ref|ZP_17931271.1| DNA mismatch repair protein MutS [Escherichia coli TW07945]
gi|424488457|ref|ZP_17937019.1| DNA mismatch repair protein MutS [Escherichia coli TW09098]
gi|424495042|ref|ZP_17942740.1| DNA mismatch repair protein MutS [Escherichia coli TW09195]
gi|424501817|ref|ZP_17948714.1| DNA mismatch repair protein MutS [Escherichia coli EC4203]
gi|424508065|ref|ZP_17954462.1| DNA mismatch repair protein MutS [Escherichia coli EC4196]
gi|424515397|ref|ZP_17960070.1| DNA mismatch repair protein MutS [Escherichia coli TW14313]
gi|424521611|ref|ZP_17965738.1| DNA mismatch repair protein MutS [Escherichia coli TW14301]
gi|424527499|ref|ZP_17971216.1| DNA mismatch repair protein MutS [Escherichia coli EC4421]
gi|424545805|ref|ZP_17988204.1| DNA mismatch repair protein MutS [Escherichia coli EC4402]
gi|424552044|ref|ZP_17993900.1| DNA mismatch repair protein MutS [Escherichia coli EC4439]
gi|424558224|ref|ZP_17999641.1| DNA mismatch repair protein MutS [Escherichia coli EC4436]
gi|424564567|ref|ZP_18005571.1| DNA mismatch repair protein MutS [Escherichia coli EC4437]
gi|424570703|ref|ZP_18011258.1| DNA mismatch repair protein MutS [Escherichia coli EC4448]
gi|424582687|ref|ZP_18022334.1| DNA mismatch repair protein MutS [Escherichia coli EC1863]
gi|425105456|ref|ZP_18507775.1| DNA mismatch repair protein MutS [Escherichia coli 5.2239]
gi|425127394|ref|ZP_18528563.1| DNA mismatch repair protein MutS [Escherichia coli 8.0586]
gi|425133128|ref|ZP_18533978.1| DNA mismatch repair protein MutS [Escherichia coli 8.2524]
gi|425139714|ref|ZP_18540096.1| DNA mismatch repair protein MutS [Escherichia coli 10.0833]
gi|425145421|ref|ZP_18545419.1| DNA mismatch repair protein MutS [Escherichia coli 10.0869]
gi|425151532|ref|ZP_18551147.1| DNA mismatch repair protein MutS [Escherichia coli 88.0221]
gi|425163760|ref|ZP_18562647.1| DNA mismatch repair protein MutS [Escherichia coli FDA506]
gi|425187864|ref|ZP_18585139.1| DNA mismatch repair protein MutS [Escherichia coli FRIK1997]
gi|425194638|ref|ZP_18591407.1| DNA mismatch repair protein MutS [Escherichia coli NE1487]
gi|425213253|ref|ZP_18608655.1| DNA mismatch repair protein MutS [Escherichia coli PA4]
gi|425219374|ref|ZP_18614340.1| DNA mismatch repair protein MutS [Escherichia coli PA23]
gi|425225924|ref|ZP_18620392.1| DNA mismatch repair protein MutS [Escherichia coli PA49]
gi|425238106|ref|ZP_18631826.1| DNA mismatch repair protein MutS [Escherichia coli TT12B]
gi|425244324|ref|ZP_18637630.1| DNA mismatch repair protein MutS [Escherichia coli MA6]
gi|425250487|ref|ZP_18643429.1| DNA mismatch repair protein MutS [Escherichia coli 5905]
gi|425256312|ref|ZP_18648831.1| DNA mismatch repair protein MutS [Escherichia coli CB7326]
gi|425262573|ref|ZP_18654580.1| DNA mismatch repair protein MutS [Escherichia coli EC96038]
gi|425268574|ref|ZP_18660205.1| DNA mismatch repair protein MutS [Escherichia coli 5412]
gi|425296008|ref|ZP_18686204.1| DNA mismatch repair protein MutS [Escherichia coli PA38]
gi|425324775|ref|ZP_18713143.1| DNA mismatch repair protein MutS [Escherichia coli EC1737]
gi|425331139|ref|ZP_18718992.1| DNA mismatch repair protein MutS [Escherichia coli EC1846]
gi|425337318|ref|ZP_18724688.1| DNA mismatch repair protein MutS [Escherichia coli EC1847]
gi|425355759|ref|ZP_18741827.1| DNA mismatch repair protein MutS [Escherichia coli EC1850]
gi|425361720|ref|ZP_18747368.1| DNA mismatch repair protein MutS [Escherichia coli EC1856]
gi|425367912|ref|ZP_18753062.1| DNA mismatch repair protein MutS [Escherichia coli EC1862]
gi|425374245|ref|ZP_18758889.1| DNA mismatch repair protein MutS [Escherichia coli EC1864]
gi|425387140|ref|ZP_18770699.1| DNA mismatch repair protein MutS [Escherichia coli EC1866]
gi|425393792|ref|ZP_18776901.1| DNA mismatch repair protein MutS [Escherichia coli EC1868]
gi|425399928|ref|ZP_18782635.1| DNA mismatch repair protein MutS [Escherichia coli EC1869]
gi|425406016|ref|ZP_18788239.1| DNA mismatch repair protein MutS [Escherichia coli EC1870]
gi|425412404|ref|ZP_18794168.1| DNA mismatch repair protein MutS [Escherichia coli NE098]
gi|425418729|ref|ZP_18800000.1| DNA mismatch repair protein MutS [Escherichia coli FRIK523]
gi|425429987|ref|ZP_18810599.1| DNA mismatch repair protein MutS [Escherichia coli 0.1304]
gi|428954502|ref|ZP_19026300.1| DNA mismatch repair protein MutS [Escherichia coli 88.1042]
gi|428960478|ref|ZP_19031783.1| DNA mismatch repair protein MutS [Escherichia coli 89.0511]
gi|428967096|ref|ZP_19037815.1| DNA mismatch repair protein MutS [Escherichia coli 90.0091]
gi|428972893|ref|ZP_19043231.1| DNA mismatch repair protein MutS [Escherichia coli 90.0039]
gi|428979419|ref|ZP_19049242.1| DNA mismatch repair protein MutS [Escherichia coli 90.2281]
gi|428985060|ref|ZP_19054456.1| DNA mismatch repair protein MutS [Escherichia coli 93.0055]
gi|428991215|ref|ZP_19060206.1| DNA mismatch repair protein MutS [Escherichia coli 93.0056]
gi|428997089|ref|ZP_19065687.1| DNA mismatch repair protein MutS [Escherichia coli 94.0618]
gi|429009428|ref|ZP_19076933.1| DNA mismatch repair protein MutS [Escherichia coli 95.1288]
gi|429021979|ref|ZP_19088504.1| DNA mismatch repair protein MutS [Escherichia coli 96.0428]
gi|429034066|ref|ZP_19099591.1| DNA mismatch repair protein MutS [Escherichia coli 96.0939]
gi|429040145|ref|ZP_19105250.1| DNA mismatch repair protein MutS [Escherichia coli 96.0932]
gi|429046185|ref|ZP_19110899.1| DNA mismatch repair protein MutS [Escherichia coli 96.0107]
gi|429056839|ref|ZP_19121153.1| DNA mismatch repair protein MutS [Escherichia coli 97.1742]
gi|429062321|ref|ZP_19126334.1| DNA mismatch repair protein MutS [Escherichia coli 97.0007]
gi|429068604|ref|ZP_19132069.1| DNA mismatch repair protein MutS [Escherichia coli 99.0672]
gi|429074526|ref|ZP_19137779.1| DNA mismatch repair protein MutS [Escherichia coli 99.0678]
gi|429079763|ref|ZP_19142898.1| DNA mismatch repair protein MutS [Escherichia coli 99.0713]
gi|429827764|ref|ZP_19358806.1| DNA mismatch repair protein MutS [Escherichia coli 96.0109]
gi|432377905|ref|ZP_19620893.1| DNA mismatch repair protein mutS [Escherichia coli KTE12]
gi|432486484|ref|ZP_19728397.1| DNA mismatch repair protein mutS [Escherichia coli KTE212]
gi|432576961|ref|ZP_19813416.1| DNA mismatch repair protein mutS [Escherichia coli KTE56]
gi|432671805|ref|ZP_19907332.1| DNA mismatch repair protein mutS [Escherichia coli KTE119]
gi|432806883|ref|ZP_20040800.1| DNA mismatch repair protein mutS [Escherichia coli KTE91]
gi|432810418|ref|ZP_20044296.1| DNA mismatch repair protein mutS [Escherichia coli KTE101]
gi|432828343|ref|ZP_20061964.1| DNA mismatch repair protein mutS [Escherichia coli KTE135]
gi|432835661|ref|ZP_20069197.1| DNA mismatch repair protein mutS [Escherichia coli KTE136]
gi|432935629|ref|ZP_20134943.1| DNA mismatch repair protein mutS [Escherichia coli KTE184]
gi|433093076|ref|ZP_20279337.1| DNA mismatch repair protein mutS [Escherichia coli KTE138]
gi|433174607|ref|ZP_20359124.1| DNA mismatch repair protein mutS [Escherichia coli KTE232]
gi|433194753|ref|ZP_20378735.1| DNA mismatch repair protein mutS [Escherichia coli KTE90]
gi|444932003|ref|ZP_21251041.1| DNA mismatch repair protein MutS [Escherichia coli 99.0814]
gi|444943076|ref|ZP_21261592.1| DNA mismatch repair protein MutS [Escherichia coli 99.0816]
gi|444954105|ref|ZP_21272197.1| DNA mismatch repair protein MutS [Escherichia coli 99.0848]
gi|444959620|ref|ZP_21277472.1| DNA mismatch repair protein MutS [Escherichia coli 99.1753]
gi|444976043|ref|ZP_21293162.1| DNA mismatch repair protein MutS [Escherichia coli 99.1805]
gi|444986837|ref|ZP_21303617.1| DNA mismatch repair protein MutS [Escherichia coli PA11]
gi|444992139|ref|ZP_21308781.1| DNA mismatch repair protein MutS [Escherichia coli PA19]
gi|444997444|ref|ZP_21313941.1| DNA mismatch repair protein MutS [Escherichia coli PA13]
gi|445003018|ref|ZP_21319407.1| DNA mismatch repair protein MutS [Escherichia coli PA2]
gi|445008449|ref|ZP_21324688.1| DNA mismatch repair protein MutS [Escherichia coli PA47]
gi|445013551|ref|ZP_21329658.1| DNA mismatch repair protein MutS [Escherichia coli PA48]
gi|445019457|ref|ZP_21335420.1| DNA mismatch repair protein MutS [Escherichia coli PA8]
gi|445024838|ref|ZP_21340660.1| DNA mismatch repair protein MutS [Escherichia coli 7.1982]
gi|445030260|ref|ZP_21345933.1| DNA mismatch repair protein MutS [Escherichia coli 99.1781]
gi|445041307|ref|ZP_21356679.1| DNA mismatch repair protein MutS [Escherichia coli PA35]
gi|445046535|ref|ZP_21361785.1| DNA mismatch repair protein MutS [Escherichia coli 3.4880]
gi|445057809|ref|ZP_21372667.1| DNA mismatch repair protein MutS [Escherichia coli 99.0670]
gi|452969445|ref|ZP_21967672.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC4009]
gi|13959406|sp|Q9S6P8.1|MUTS_ECO57 RecName: Full=DNA mismatch repair protein MutS
gi|226723058|sp|B7LXE0.1|MUTS_ECO8A RecName: Full=DNA mismatch repair protein MutS
gi|238058942|sp|B5Z397.1|MUTS_ECO5E RecName: Full=DNA mismatch repair protein MutS
gi|4887554|emb|CAB43497.1| mismatch repair protein [Escherichia coli]
gi|13363060|dbj|BAB37012.1| MutS protein [Escherichia coli O157:H7 str. Sakai]
gi|187769600|gb|EDU33444.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC4196]
gi|188015814|gb|EDU53936.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC4113]
gi|188488450|gb|EDU63553.1| DNA mismatch repair protein MutS [Escherichia coli 53638]
gi|189003145|gb|EDU72131.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC4076]
gi|189357264|gb|EDU75683.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC4401]
gi|189362111|gb|EDU80530.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC4486]
gi|189372119|gb|EDU90535.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC869]
gi|189377459|gb|EDU95875.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC508]
gi|190903158|gb|EDV62881.1| DNA mismatch repair protein MutS [Escherichia coli B7A]
gi|192957000|gb|EDV87451.1| DNA mismatch repair protein MutS [Escherichia coli E110019]
gi|208727736|gb|EDZ77337.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC4206]
gi|208735412|gb|EDZ84099.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC4045]
gi|208739537|gb|EDZ87219.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC4042]
gi|209160582|gb|ACI38015.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC4115]
gi|209761768|gb|ACI79196.1| MutS protein [Escherichia coli]
gi|209761770|gb|ACI79197.1| MutS protein [Escherichia coli]
gi|209761772|gb|ACI79198.1| MutS protein [Escherichia coli]
gi|209761776|gb|ACI79200.1| MutS protein [Escherichia coli]
gi|218362045|emb|CAQ99652.1| methyl-directed mismatch repair protein [Escherichia coli IAI1]
gi|254594075|gb|ACT73436.1| methyl-directed mismatch repair protein [Escherichia coli O157:H7
str. TW14359]
gi|290763935|gb|ADD57896.1| DNA mismatch repair protein mutS [Escherichia coli O55:H7 str.
CB9615]
gi|291322140|gb|EFE61569.1| DNA mismatch repair protein MutS [Escherichia coli B088]
gi|300526774|gb|EFK47843.1| DNA mismatch repair protein MutS [Escherichia coli MS 119-7]
gi|300531790|gb|EFK52852.1| DNA mismatch repair protein MutS [Escherichia coli MS 107-1]
gi|306907278|gb|EFN37784.1| DNA mismatch repair protein MutS [Escherichia coli W]
gi|315062010|gb|ADT76337.1| methyl-directed mismatch repair protein [Escherichia coli W]
gi|320640378|gb|EFX09917.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
G5101]
gi|320645925|gb|EFX14906.1| DNA mismatch repair protein MutS [Escherichia coli O157:H- str.
493-89]
gi|320651225|gb|EFX19660.1| DNA mismatch repair protein MutS [Escherichia coli O157:H- str. H
2687]
gi|320656775|gb|EFX24663.1| DNA mismatch repair protein MutS [Escherichia coli O55:H7 str.
3256-97 TW 07815]
gi|320662317|gb|EFX29714.1| DNA mismatch repair protein MutS [Escherichia coli O55:H7 str. USDA
5905]
gi|320667369|gb|EFX34327.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
LSU-61]
gi|323377407|gb|ADX49675.1| DNA mismatch repair protein MutS [Escherichia coli KO11FL]
gi|323935710|gb|EGB32024.1| DNA mismatch repair protein MutS [Escherichia coli E1520]
gi|323946385|gb|EGB42413.1| DNA mismatch repair protein MutS [Escherichia coli H120]
gi|324119983|gb|EGC13861.1| DNA mismatch repair protein MutS [Escherichia coli E1167]
gi|326339197|gb|EGD63012.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
1044]
gi|326342920|gb|EGD66688.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
1125]
gi|331047595|gb|EGI19672.1| DNA mismatch repair protein MutS [Escherichia coli M718]
gi|331063136|gb|EGI35049.1| DNA mismatch repair protein MutS [Escherichia coli TA271]
gi|331073539|gb|EGI44860.1| DNA mismatch repair protein MutS [Escherichia coli H591]
gi|332087463|gb|EGI92591.1| DNA mismatch repair protein MutS [Shigella boydii 5216-82]
gi|332102960|gb|EGJ06306.1| methyl-directed mismatch repair protein [Shigella sp. D9]
gi|342929300|gb|EGU98022.1| DNA mismatch repair protein MutS [Escherichia coli MS 79-10]
gi|345335666|gb|EGW68103.1| DNA mismatch repair protein MutS [Escherichia coli STEC_B2F1]
gi|377891303|gb|EHU55755.1| DNA mismatch repair protein MutS [Escherichia coli DEC3B]
gi|377892421|gb|EHU56867.1| DNA mismatch repair protein MutS [Escherichia coli DEC3A]
gi|377904041|gb|EHU68328.1| DNA mismatch repair protein MutS [Escherichia coli DEC3C]
gi|377908925|gb|EHU73134.1| DNA mismatch repair protein MutS [Escherichia coli DEC3D]
gi|377910347|gb|EHU74535.1| DNA mismatch repair protein MutS [Escherichia coli DEC3E]
gi|377919940|gb|EHU83973.1| DNA mismatch repair protein MutS [Escherichia coli DEC3F]
gi|377924885|gb|EHU88826.1| DNA mismatch repair protein MutS [Escherichia coli DEC4A]
gi|377929024|gb|EHU92924.1| DNA mismatch repair protein MutS [Escherichia coli DEC4B]
gi|377940273|gb|EHV04023.1| DNA mismatch repair protein MutS [Escherichia coli DEC4D]
gi|377941116|gb|EHV04862.1| DNA mismatch repair protein MutS [Escherichia coli DEC4C]
gi|377956296|gb|EHV19846.1| DNA mismatch repair protein MutS [Escherichia coli DEC4F]
gi|377964942|gb|EHV28374.1| DNA mismatch repair protein MutS [Escherichia coli DEC5B]
gi|377982291|gb|EHV45543.1| DNA mismatch repair protein MutS [Escherichia coli DEC5E]
gi|378126512|gb|EHW87906.1| DNA mismatch repair protein MutS [Escherichia coli DEC10E]
gi|378184345|gb|EHX44981.1| DNA mismatch repair protein MutS [Escherichia coli DEC13A]
gi|378198447|gb|EHX58917.1| DNA mismatch repair protein MutS [Escherichia coli DEC13B]
gi|378199138|gb|EHX59606.1| DNA mismatch repair protein MutS [Escherichia coli DEC13C]
gi|378201539|gb|EHX61982.1| DNA mismatch repair protein MutS [Escherichia coli DEC13D]
gi|378211389|gb|EHX71727.1| DNA mismatch repair protein MutS [Escherichia coli DEC13E]
gi|378215871|gb|EHX76163.1| DNA mismatch repair protein MutS [Escherichia coli DEC14A]
gi|378218239|gb|EHX78511.1| DNA mismatch repair protein MutS [Escherichia coli DEC14B]
gi|378230344|gb|EHX90466.1| DNA mismatch repair protein MutS [Escherichia coli DEC14D]
gi|383391885|gb|AFH16843.1| DNA mismatch repair protein MutS [Escherichia coli KO11FL]
gi|383406277|gb|AFH12520.1| DNA mismatch repair protein MutS [Escherichia coli W]
gi|384471872|gb|EIE55939.1| DNA mismatch repair protein MutS [Escherichia coli AI27]
gi|385711020|gb|EIG47988.1| DNA mismatch repair protein mutS [Escherichia coli B799]
gi|386152513|gb|EIH03802.1| DNA mismatch repair protein MutS [Escherichia coli 5.0588]
gi|386167080|gb|EIH33600.1| DNA mismatch repair protein MutS [Escherichia coli 96.0497]
gi|386797372|gb|AFJ30406.1| DNA mismatch repair protein MutS [Escherichia coli Xuzhou21]
gi|390640292|gb|EIN19756.1| DNA mismatch repair protein MutS [Escherichia coli FRIK1996]
gi|390642025|gb|EIN21447.1| DNA mismatch repair protein MutS [Escherichia coli FDA517]
gi|390642478|gb|EIN21873.1| DNA mismatch repair protein MutS [Escherichia coli FDA505]
gi|390659150|gb|EIN36917.1| DNA mismatch repair protein MutS [Escherichia coli 93-001]
gi|390660317|gb|EIN38026.1| DNA mismatch repair protein MutS [Escherichia coli FRIK1985]
gi|390662601|gb|EIN40190.1| DNA mismatch repair protein MutS [Escherichia coli FRIK1990]
gi|390683014|gb|EIN58751.1| DNA mismatch repair protein MutS [Escherichia coli PA9]
gi|390695154|gb|EIN69706.1| DNA mismatch repair protein MutS [Escherichia coli PA10]
gi|390699724|gb|EIN74067.1| DNA mismatch repair protein MutS [Escherichia coli PA15]
gi|390721237|gb|EIN93938.1| DNA mismatch repair protein MutS [Escherichia coli PA25]
gi|390722752|gb|EIN95389.1| DNA mismatch repair protein MutS [Escherichia coli PA24]
gi|390726197|gb|EIN98669.1| DNA mismatch repair protein MutS [Escherichia coli PA28]
gi|390740759|gb|EIO11877.1| DNA mismatch repair protein MutS [Escherichia coli PA31]
gi|390741346|gb|EIO12418.1| DNA mismatch repair protein MutS [Escherichia coli PA32]
gi|390757086|gb|EIO26575.1| DNA mismatch repair protein MutS [Escherichia coli PA40]
gi|390766065|gb|EIO35208.1| DNA mismatch repair protein MutS [Escherichia coli PA41]
gi|390766751|gb|EIO35862.1| DNA mismatch repair protein MutS [Escherichia coli PA39]
gi|390767523|gb|EIO36606.1| DNA mismatch repair protein MutS [Escherichia coli PA42]
gi|390780597|gb|EIO48297.1| DNA mismatch repair protein MutS [Escherichia coli TW06591]
gi|390788434|gb|EIO55900.1| DNA mismatch repair protein MutS [Escherichia coli TW07945]
gi|390788966|gb|EIO56431.1| DNA mismatch repair protein MutS [Escherichia coli TW10246]
gi|390795348|gb|EIO62632.1| DNA mismatch repair protein MutS [Escherichia coli TW11039]
gi|390803817|gb|EIO70805.1| DNA mismatch repair protein MutS [Escherichia coli TW09098]
gi|390806059|gb|EIO72981.1| DNA mismatch repair protein MutS [Escherichia coli TW09109]
gi|390814873|gb|EIO81422.1| DNA mismatch repair protein MutS [Escherichia coli TW10119]
gi|390824713|gb|EIO90670.1| DNA mismatch repair protein MutS [Escherichia coli EC4203]
gi|390828532|gb|EIO94196.1| DNA mismatch repair protein MutS [Escherichia coli TW09195]
gi|390829952|gb|EIO95537.1| DNA mismatch repair protein MutS [Escherichia coli EC4196]
gi|390844967|gb|EIP08654.1| DNA mismatch repair protein MutS [Escherichia coli TW14313]
gi|390845199|gb|EIP08873.1| DNA mismatch repair protein MutS [Escherichia coli TW14301]
gi|390849735|gb|EIP13157.1| DNA mismatch repair protein MutS [Escherichia coli EC4421]
gi|390869813|gb|EIP31441.1| DNA mismatch repair protein MutS [Escherichia coli EC4402]
gi|390877432|gb|EIP38354.1| DNA mismatch repair protein MutS [Escherichia coli EC4439]
gi|390882864|gb|EIP43346.1| DNA mismatch repair protein MutS [Escherichia coli EC4436]
gi|390892164|gb|EIP51752.1| DNA mismatch repair protein MutS [Escherichia coli EC4437]
gi|390894772|gb|EIP54266.1| DNA mismatch repair protein MutS [Escherichia coli EC4448]
gi|390899087|gb|EIP58335.1| DNA mismatch repair protein MutS [Escherichia coli EC1738]
gi|390906753|gb|EIP65622.1| DNA mismatch repair protein MutS [Escherichia coli EC1734]
gi|390917813|gb|EIP76229.1| DNA mismatch repair protein MutS [Escherichia coli EC1863]
gi|391246988|gb|EIQ06244.1| DNA mismatch repair protein MutS [Shigella flexneri 2850-71]
gi|397784077|gb|EJK94933.1| DNA mismatch repair protein MutS [Escherichia coli STEC_O31]
gi|408063729|gb|EKG98218.1| DNA mismatch repair protein MutS [Escherichia coli PA7]
gi|408065640|gb|EKH00110.1| DNA mismatch repair protein MutS [Escherichia coli FRIK920]
gi|408078099|gb|EKH12272.1| DNA mismatch repair protein MutS [Escherichia coli FDA506]
gi|408102981|gb|EKH35366.1| DNA mismatch repair protein MutS [Escherichia coli FRIK1997]
gi|408107740|gb|EKH39810.1| DNA mismatch repair protein MutS [Escherichia coli NE1487]
gi|408126425|gb|EKH56985.1| DNA mismatch repair protein MutS [Escherichia coli PA4]
gi|408136531|gb|EKH66270.1| DNA mismatch repair protein MutS [Escherichia coli PA23]
gi|408139197|gb|EKH68831.1| DNA mismatch repair protein MutS [Escherichia coli PA49]
gi|408153855|gb|EKH82225.1| DNA mismatch repair protein MutS [Escherichia coli TT12B]
gi|408158800|gb|EKH86903.1| DNA mismatch repair protein MutS [Escherichia coli MA6]
gi|408162716|gb|EKH90603.1| DNA mismatch repair protein MutS [Escherichia coli 5905]
gi|408172379|gb|EKH99452.1| DNA mismatch repair protein MutS [Escherichia coli CB7326]
gi|408179157|gb|EKI05845.1| DNA mismatch repair protein MutS [Escherichia coli EC96038]
gi|408182008|gb|EKI08542.1| DNA mismatch repair protein MutS [Escherichia coli 5412]
gi|408216418|gb|EKI40746.1| DNA mismatch repair protein MutS [Escherichia coli PA38]
gi|408241415|gb|EKI64062.1| DNA mismatch repair protein MutS [Escherichia coli EC1737]
gi|408245954|gb|EKI68302.1| DNA mismatch repair protein MutS [Escherichia coli EC1846]
gi|408254436|gb|EKI75959.1| DNA mismatch repair protein MutS [Escherichia coli EC1847]
gi|408273155|gb|EKI93221.1| DNA mismatch repair protein MutS [Escherichia coli EC1850]
gi|408276071|gb|EKI96004.1| DNA mismatch repair protein MutS [Escherichia coli EC1856]
gi|408285152|gb|EKJ04202.1| DNA mismatch repair protein MutS [Escherichia coli EC1862]
gi|408290019|gb|EKJ08756.1| DNA mismatch repair protein MutS [Escherichia coli EC1864]
gi|408306460|gb|EKJ23826.1| DNA mismatch repair protein MutS [Escherichia coli EC1868]
gi|408306870|gb|EKJ24232.1| DNA mismatch repair protein MutS [Escherichia coli EC1866]
gi|408317656|gb|EKJ33886.1| DNA mismatch repair protein MutS [Escherichia coli EC1869]
gi|408323714|gb|EKJ39675.1| DNA mismatch repair protein MutS [Escherichia coli EC1870]
gi|408325475|gb|EKJ41350.1| DNA mismatch repair protein MutS [Escherichia coli NE098]
gi|408335595|gb|EKJ50433.1| DNA mismatch repair protein MutS [Escherichia coli FRIK523]
gi|408345225|gb|EKJ59567.1| DNA mismatch repair protein MutS [Escherichia coli 0.1304]
gi|408548483|gb|EKK25867.1| DNA mismatch repair protein MutS [Escherichia coli 5.2239]
gi|408567473|gb|EKK43529.1| DNA mismatch repair protein MutS [Escherichia coli 8.0586]
gi|408577782|gb|EKK53332.1| DNA mismatch repair protein MutS [Escherichia coli 10.0833]
gi|408580531|gb|EKK55935.1| DNA mismatch repair protein MutS [Escherichia coli 8.2524]
gi|408590624|gb|EKK65098.1| DNA mismatch repair protein MutS [Escherichia coli 10.0869]
gi|408595664|gb|EKK69892.1| DNA mismatch repair protein MutS [Escherichia coli 88.0221]
gi|408611536|gb|EKK84896.1| DNA mismatch repair protein MutS [Escherichia coli 10.0821]
gi|427203249|gb|EKV73554.1| DNA mismatch repair protein MutS [Escherichia coli 88.1042]
gi|427205430|gb|EKV75679.1| DNA mismatch repair protein MutS [Escherichia coli 89.0511]
gi|427220067|gb|EKV89011.1| DNA mismatch repair protein MutS [Escherichia coli 90.0091]
gi|427223229|gb|EKV91988.1| DNA mismatch repair protein MutS [Escherichia coli 90.2281]
gi|427227160|gb|EKV95740.1| DNA mismatch repair protein MutS [Escherichia coli 90.0039]
gi|427240380|gb|EKW07833.1| DNA mismatch repair protein MutS [Escherichia coli 93.0056]
gi|427240898|gb|EKW08344.1| DNA mismatch repair protein MutS [Escherichia coli 93.0055]
gi|427244606|gb|EKW11919.1| DNA mismatch repair protein MutS [Escherichia coli 94.0618]
gi|427263375|gb|EKW29134.1| DNA mismatch repair protein MutS [Escherichia coli 95.1288]
gi|427275475|gb|EKW40090.1| DNA mismatch repair protein MutS [Escherichia coli 96.0428]
gi|427282151|gb|EKW46424.1| DNA mismatch repair protein MutS [Escherichia coli 96.0939]
gi|427290658|gb|EKW54116.1| DNA mismatch repair protein MutS [Escherichia coli 96.0932]
gi|427297926|gb|EKW60950.1| DNA mismatch repair protein MutS [Escherichia coli 96.0107]
gi|427311302|gb|EKW73510.1| DNA mismatch repair protein MutS [Escherichia coli 97.1742]
gi|427314246|gb|EKW76305.1| DNA mismatch repair protein MutS [Escherichia coli 97.0007]
gi|427318596|gb|EKW80459.1| DNA mismatch repair protein MutS [Escherichia coli 99.0672]
gi|427327000|gb|EKW88401.1| DNA mismatch repair protein MutS [Escherichia coli 99.0678]
gi|427328061|gb|EKW89429.1| DNA mismatch repair protein MutS [Escherichia coli 99.0713]
gi|429252777|gb|EKY37289.1| DNA mismatch repair protein MutS [Escherichia coli 96.0109]
gi|430897490|gb|ELC19692.1| DNA mismatch repair protein mutS [Escherichia coli KTE12]
gi|431015007|gb|ELD28571.1| DNA mismatch repair protein mutS [Escherichia coli KTE212]
gi|431114197|gb|ELE17749.1| DNA mismatch repair protein mutS [Escherichia coli KTE56]
gi|431209484|gb|ELF07591.1| DNA mismatch repair protein mutS [Escherichia coli KTE119]
gi|431354135|gb|ELG40878.1| DNA mismatch repair protein mutS [Escherichia coli KTE91]
gi|431360769|gb|ELG47368.1| DNA mismatch repair protein mutS [Escherichia coli KTE101]
gi|431384275|gb|ELG68336.1| DNA mismatch repair protein mutS [Escherichia coli KTE136]
gi|431384342|gb|ELG68402.1| DNA mismatch repair protein mutS [Escherichia coli KTE135]
gi|431451978|gb|ELH32432.1| DNA mismatch repair protein mutS [Escherichia coli KTE184]
gi|431609199|gb|ELI78528.1| DNA mismatch repair protein mutS [Escherichia coli KTE138]
gi|431690669|gb|ELJ56145.1| DNA mismatch repair protein mutS [Escherichia coli KTE232]
gi|431714543|gb|ELJ78728.1| DNA mismatch repair protein mutS [Escherichia coli KTE90]
gi|444537270|gb|ELV17212.1| DNA mismatch repair protein MutS [Escherichia coli 99.0814]
gi|444557301|gb|ELV34655.1| DNA mismatch repair protein MutS [Escherichia coli 99.0816]
gi|444562388|gb|ELV39457.1| DNA mismatch repair protein MutS [Escherichia coli 99.0848]
gi|444572159|gb|ELV48605.1| DNA mismatch repair protein MutS [Escherichia coli 99.1753]
gi|444591975|gb|ELV67236.1| DNA mismatch repair protein MutS [Escherichia coli PA11]
gi|444594145|gb|ELV69342.1| DNA mismatch repair protein MutS [Escherichia coli 99.1805]
gi|444605181|gb|ELV79823.1| DNA mismatch repair protein MutS [Escherichia coli PA13]
gi|444605965|gb|ELV80591.1| DNA mismatch repair protein MutS [Escherichia coli PA19]
gi|444614536|gb|ELV88762.1| DNA mismatch repair protein MutS [Escherichia coli PA2]
gi|444622192|gb|ELV96156.1| DNA mismatch repair protein MutS [Escherichia coli PA47]
gi|444623160|gb|ELV97095.1| DNA mismatch repair protein MutS [Escherichia coli PA48]
gi|444628656|gb|ELW02393.1| DNA mismatch repair protein MutS [Escherichia coli PA8]
gi|444637217|gb|ELW10591.1| DNA mismatch repair protein MutS [Escherichia coli 7.1982]
gi|444640269|gb|ELW13551.1| DNA mismatch repair protein MutS [Escherichia coli 99.1781]
gi|444653468|gb|ELW26189.1| DNA mismatch repair protein MutS [Escherichia coli PA35]
gi|444658841|gb|ELW31278.1| DNA mismatch repair protein MutS [Escherichia coli 3.4880]
gi|444668964|gb|ELW40962.1| DNA mismatch repair protein MutS [Escherichia coli 99.0670]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|24114026|ref|NP_708536.1| DNA mismatch repair protein MutS [Shigella flexneri 2a str. 301]
gi|30064089|ref|NP_838260.1| DNA mismatch repair protein MutS [Shigella flexneri 2a str. 2457T]
gi|110806640|ref|YP_690160.1| DNA mismatch repair protein MutS [Shigella flexneri 5 str. 8401]
gi|384544314|ref|YP_005728377.1| DNA mismatch repair protein mutS [Shigella flexneri 2002017]
gi|417703386|ref|ZP_12352492.1| DNA mismatch repair protein MutS [Shigella flexneri K-218]
gi|417724279|ref|ZP_12373081.1| DNA mismatch repair protein MutS [Shigella flexneri K-304]
gi|417729630|ref|ZP_12378323.1| DNA mismatch repair protein MutS [Shigella flexneri K-671]
gi|417734683|ref|ZP_12383331.1| DNA mismatch repair protein MutS [Shigella flexneri 2747-71]
gi|418257919|ref|ZP_12881396.1| DNA mismatch repair protein MutS [Shigella flexneri 6603-63]
gi|424839028|ref|ZP_18263665.1| DNA mismatch repair protein MutS [Shigella flexneri 5a str. M90T]
gi|44888198|sp|Q83QE9.1|MUTS_SHIFL RecName: Full=DNA mismatch repair protein MutS
gi|123047978|sp|Q0T1G0.1|MUTS_SHIF8 RecName: Full=DNA mismatch repair protein MutS
gi|24053146|gb|AAN44243.1| methyl-directed mismatch repair protein [Shigella flexneri 2a str.
301]
gi|30042345|gb|AAP18070.1| methyl-directed mismatch repair protein [Shigella flexneri 2a str.
2457T]
gi|110616188|gb|ABF04855.1| methyl-directed mismatch repair [Shigella flexneri 5 str. 8401]
gi|281602100|gb|ADA75084.1| DNA mismatch repair protein mutS [Shigella flexneri 2002017]
gi|332753583|gb|EGJ83962.1| DNA mismatch repair protein MutS [Shigella flexneri K-671]
gi|332755627|gb|EGJ85990.1| DNA mismatch repair protein MutS [Shigella flexneri 2747-71]
gi|333000613|gb|EGK20190.1| DNA mismatch repair protein MutS [Shigella flexneri K-218]
gi|333015831|gb|EGK35167.1| DNA mismatch repair protein MutS [Shigella flexneri K-304]
gi|383468080|gb|EID63101.1| DNA mismatch repair protein MutS [Shigella flexneri 5a str. M90T]
gi|397896238|gb|EJL12658.1| DNA mismatch repair protein MutS [Shigella flexneri 6603-63]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|420348738|ref|ZP_14850120.1| DNA mismatch repair protein MutS [Shigella boydii 965-58]
gi|391267779|gb|EIQ26710.1| DNA mismatch repair protein MutS [Shigella boydii 965-58]
Length = 841
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 620 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 679
Query: 153 VDEL 156
+DE+
Sbjct: 680 MDEI 683
Score = 42.4 bits (98), Expect = 0.060, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L + + + +RQ
Sbjct: 256 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMTVRDTRVLLERQQT 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 316 IGALQD---FTAELQPVLRQVGDLERIL 340
>gi|420332560|ref|ZP_14834210.1| DNA mismatch repair protein MutS [Shigella flexneri K-1770]
gi|391249391|gb|EIQ08626.1| DNA mismatch repair protein MutS [Shigella flexneri K-1770]
Length = 841
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 620 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 679
Query: 153 VDEL 156
+DE+
Sbjct: 680 MDEI 683
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 256 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 316 IGALQD---FTAELQPVLRQVGDLERIL 340
>gi|419915941|ref|ZP_14434272.1| DNA mismatch repair protein MutS [Escherichia coli KD1]
gi|388382341|gb|EIL44196.1| DNA mismatch repair protein MutS [Escherichia coli KD1]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|419105263|ref|ZP_13650390.1| DNA mismatch repair protein MutS [Escherichia coli DEC4E]
gi|444926304|ref|ZP_21245589.1| DNA mismatch repair protein MutS [Escherichia coli 09BKT078844]
gi|377946443|gb|EHV10123.1| DNA mismatch repair protein MutS [Escherichia coli DEC4E]
gi|444538736|gb|ELV18582.1| DNA mismatch repair protein MutS [Escherichia coli 09BKT078844]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|417140610|ref|ZP_11983860.1| DNA mismatch repair protein MutS [Escherichia coli 97.0259]
gi|417309180|ref|ZP_12096019.1| DNA mismatch repair protein mutS [Escherichia coli PCN033]
gi|432793888|ref|ZP_20027970.1| DNA mismatch repair protein mutS [Escherichia coli KTE78]
gi|432795389|ref|ZP_20029449.1| DNA mismatch repair protein mutS [Escherichia coli KTE79]
gi|338769160|gb|EGP23941.1| DNA mismatch repair protein mutS [Escherichia coli PCN033]
gi|386156733|gb|EIH13078.1| DNA mismatch repair protein MutS [Escherichia coli 97.0259]
gi|431337958|gb|ELG25045.1| DNA mismatch repair protein mutS [Escherichia coli KTE78]
gi|431350455|gb|ELG37266.1| DNA mismatch repair protein mutS [Escherichia coli KTE79]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|416898997|ref|ZP_11928479.1| DNA mismatch repair protein MutS [Escherichia coli STEC_7v]
gi|417119562|ref|ZP_11969927.1| DNA mismatch repair protein MutS [Escherichia coli 1.2741]
gi|422800644|ref|ZP_16849141.1| DNA mismatch repair protein MutS [Escherichia coli M863]
gi|323966881|gb|EGB62310.1| DNA mismatch repair protein MutS [Escherichia coli M863]
gi|327251457|gb|EGE63143.1| DNA mismatch repair protein MutS [Escherichia coli STEC_7v]
gi|386137915|gb|EIG79077.1| DNA mismatch repair protein MutS [Escherichia coli 1.2741]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|387613356|ref|YP_006116472.1| DNA mismatch repair protein [Escherichia coli ETEC H10407]
gi|309703092|emb|CBJ02424.1| DNA mismatch repair protein [Escherichia coli ETEC H10407]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTTELQPVLRQVGDLERIL 352
>gi|309781250|ref|ZP_07675987.1| DNA mismatch repair protein MutS [Ralstonia sp. 5_7_47FAA]
gi|404393838|ref|ZP_10985642.1| DNA mismatch repair protein mutS [Ralstonia sp. 5_2_56FAA]
gi|308920071|gb|EFP65731.1| DNA mismatch repair protein MutS [Ralstonia sp. 5_7_47FAA]
gi|348615648|gb|EGY65159.1| DNA mismatch repair protein mutS [Ralstonia sp. 5_2_56FAA]
Length = 881
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPA++ + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 646 VLLAYVGAFVPAEAAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLV 705
Query: 152 LVDEL 156
L+DE+
Sbjct: 706 LMDEI 710
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + TL LD C TS G R+LR L PL + + RQ AI
Sbjct: 283 LDTATRRNLELTETLRGQESPTLFSLLDTCATSMGSRLLRHWLHHPLRDRAVPQARQQAI 342
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
VLL T +RA ++ L D+ER+
Sbjct: 343 EVLLGSDWQT--LRATLRTLSDVERI 366
>gi|309795194|ref|ZP_07689613.1| DNA mismatch repair protein MutS [Escherichia coli MS 145-7]
gi|308121165|gb|EFO58427.1| DNA mismatch repair protein MutS [Escherichia coli MS 145-7]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|300906762|ref|ZP_07124444.1| DNA mismatch repair protein MutS [Escherichia coli MS 84-1]
gi|300401456|gb|EFJ84994.1| DNA mismatch repair protein MutS [Escherichia coli MS 84-1]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.2 bits (108), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCPVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|63028590|gb|AAY27162.1| major DNA mismatch repair protein [Escherichia coli]
Length = 126
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 29 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 88
Query: 153 VDEL 156
+DE+
Sbjct: 89 MDEI 92
>gi|293412092|ref|ZP_06654815.1| DNA mismatch repair protein MutS [Escherichia coli B354]
gi|291468863|gb|EFF11354.1| DNA mismatch repair protein MutS [Escherichia coli B354]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTHVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|52698224|gb|AAU86849.1| DNA mismatch repair protein [Shigella boydii]
Length = 191
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 68 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 127
Query: 153 VDEL 156
+DE+
Sbjct: 128 MDEI 131
>gi|52698296|gb|AAU86885.1| DNA mismatch repair protein [Shigella flexneri]
gi|52698298|gb|AAU86886.1| DNA mismatch repair protein [Shigella flexneri]
Length = 195
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 70 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 129
Query: 153 VDEL 156
+DE+
Sbjct: 130 MDEI 133
>gi|82778101|ref|YP_404450.1| DNA mismatch repair protein MutS [Shigella dysenteriae Sd197]
gi|309786178|ref|ZP_07680806.1| DNA mismatch repair protein MutS [Shigella dysenteriae 1617]
gi|90109857|sp|Q32CJ6.1|MUTS_SHIDS RecName: Full=DNA mismatch repair protein MutS
gi|81242249|gb|ABB62959.1| methyl-directed mismatch repair [Shigella dysenteriae Sd197]
gi|308925923|gb|EFP71402.1| DNA mismatch repair protein MutS [Shigella dysenteriae 1617]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T ++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAGLQPVLRQVGDLERIL 352
>gi|26249133|ref|NP_755173.1| DNA mismatch repair protein MutS [Escherichia coli CFT073]
gi|222157423|ref|YP_002557562.1| DNA mismatch repair protein mutS [Escherichia coli LF82]
gi|227888273|ref|ZP_04006078.1| DNA mismatch repair protein [Escherichia coli 83972]
gi|300976806|ref|ZP_07173623.1| DNA mismatch repair protein MutS [Escherichia coli MS 45-1]
gi|301049508|ref|ZP_07196466.1| DNA mismatch repair protein MutS [Escherichia coli MS 185-1]
gi|306812387|ref|ZP_07446585.1| DNA mismatch repair protein MutS [Escherichia coli NC101]
gi|331648453|ref|ZP_08349541.1| DNA mismatch repair protein MutS [Escherichia coli M605]
gi|331658844|ref|ZP_08359786.1| DNA mismatch repair protein MutS [Escherichia coli TA206]
gi|386620298|ref|YP_006139878.1| DNA mismatch repair protein [Escherichia coli NA114]
gi|386630471|ref|YP_006150191.1| DNA mismatch repair protein MutS [Escherichia coli str. 'clone D
i2']
gi|386635391|ref|YP_006155110.1| DNA mismatch repair protein MutS [Escherichia coli str. 'clone D
i14']
gi|386640218|ref|YP_006107016.1| DNA mismatch repair protein MutS [Escherichia coli ABU 83972]
gi|387618002|ref|YP_006121024.1| DNA mismatch repair protein MutS [Escherichia coli O83:H1 str. NRG
857C]
gi|387830580|ref|YP_003350517.1| DNA mismatch repair protein MutS [Escherichia coli SE15]
gi|415839758|ref|ZP_11521500.1| DNA mismatch repair protein MutS [Escherichia coli RN587/1]
gi|416336735|ref|ZP_11673205.1| DNA mismatch repair protein MutS [Escherichia coli WV_060327]
gi|417282208|ref|ZP_12069508.1| DNA mismatch repair protein MutS [Escherichia coli 3003]
gi|417285692|ref|ZP_12072983.1| DNA mismatch repair protein MutS [Escherichia coli TW07793]
gi|417663292|ref|ZP_12312872.1| DNA mismatch repair protein MutS [Escherichia coli AA86]
gi|419701535|ref|ZP_14229134.1| DNA mismatch repair protein MutS [Escherichia coli SCI-07]
gi|422363567|ref|ZP_16444104.1| DNA mismatch repair protein MutS [Escherichia coli MS 153-1]
gi|422369506|ref|ZP_16449906.1| DNA mismatch repair protein MutS [Escherichia coli MS 16-3]
gi|425279103|ref|ZP_18670336.1| DNA mismatch repair protein MutS [Escherichia coli ARS4.2123]
gi|432382431|ref|ZP_19625371.1| DNA mismatch repair protein mutS [Escherichia coli KTE15]
gi|432388363|ref|ZP_19631245.1| DNA mismatch repair protein mutS [Escherichia coli KTE16]
gi|432412859|ref|ZP_19655519.1| DNA mismatch repair protein mutS [Escherichia coli KTE39]
gi|432432934|ref|ZP_19675359.1| DNA mismatch repair protein mutS [Escherichia coli KTE187]
gi|432437416|ref|ZP_19679803.1| DNA mismatch repair protein mutS [Escherichia coli KTE188]
gi|432442158|ref|ZP_19684496.1| DNA mismatch repair protein mutS [Escherichia coli KTE189]
gi|432457757|ref|ZP_19699937.1| DNA mismatch repair protein mutS [Escherichia coli KTE201]
gi|432496752|ref|ZP_19738547.1| DNA mismatch repair protein mutS [Escherichia coli KTE214]
gi|432501174|ref|ZP_19742929.1| DNA mismatch repair protein mutS [Escherichia coli KTE216]
gi|432505496|ref|ZP_19747217.1| DNA mismatch repair protein mutS [Escherichia coli KTE220]
gi|432514994|ref|ZP_19752215.1| DNA mismatch repair protein mutS [Escherichia coli KTE224]
gi|432524890|ref|ZP_19762015.1| DNA mismatch repair protein mutS [Escherichia coli KTE230]
gi|432559897|ref|ZP_19796564.1| DNA mismatch repair protein mutS [Escherichia coli KTE49]
gi|432569778|ref|ZP_19806287.1| DNA mismatch repair protein mutS [Escherichia coli KTE53]
gi|432593911|ref|ZP_19830224.1| DNA mismatch repair protein mutS [Escherichia coli KTE60]
gi|432608578|ref|ZP_19844761.1| DNA mismatch repair protein mutS [Escherichia coli KTE67]
gi|432612712|ref|ZP_19848870.1| DNA mismatch repair protein mutS [Escherichia coli KTE72]
gi|432647264|ref|ZP_19883050.1| DNA mismatch repair protein mutS [Escherichia coli KTE86]
gi|432652219|ref|ZP_19887970.1| DNA mismatch repair protein mutS [Escherichia coli KTE87]
gi|432656855|ref|ZP_19892556.1| DNA mismatch repair protein mutS [Escherichia coli KTE93]
gi|432695501|ref|ZP_19930697.1| DNA mismatch repair protein mutS [Escherichia coli KTE162]
gi|432700123|ref|ZP_19935274.1| DNA mismatch repair protein mutS [Escherichia coli KTE169]
gi|432706963|ref|ZP_19942043.1| DNA mismatch repair protein mutS [Escherichia coli KTE6]
gi|432746688|ref|ZP_19981351.1| DNA mismatch repair protein mutS [Escherichia coli KTE43]
gi|432784609|ref|ZP_20018787.1| DNA mismatch repair protein mutS [Escherichia coli KTE63]
gi|432845711|ref|ZP_20078445.1| DNA mismatch repair protein mutS [Escherichia coli KTE141]
gi|432899839|ref|ZP_20110349.1| DNA mismatch repair protein mutS [Escherichia coli KTE192]
gi|432906088|ref|ZP_20114816.1| DNA mismatch repair protein mutS [Escherichia coli KTE194]
gi|432920728|ref|ZP_20124317.1| DNA mismatch repair protein mutS [Escherichia coli KTE173]
gi|432928412|ref|ZP_20129532.1| DNA mismatch repair protein mutS [Escherichia coli KTE175]
gi|432939168|ref|ZP_20137318.1| DNA mismatch repair protein mutS [Escherichia coli KTE183]
gi|432972848|ref|ZP_20161712.1| DNA mismatch repair protein mutS [Escherichia coli KTE207]
gi|432974846|ref|ZP_20163681.1| DNA mismatch repair protein mutS [Escherichia coli KTE209]
gi|432982061|ref|ZP_20170834.1| DNA mismatch repair protein mutS [Escherichia coli KTE211]
gi|432986451|ref|ZP_20175169.1| DNA mismatch repair protein mutS [Escherichia coli KTE215]
gi|432996401|ref|ZP_20184985.1| DNA mismatch repair protein mutS [Escherichia coli KTE218]
gi|433000972|ref|ZP_20189494.1| DNA mismatch repair protein mutS [Escherichia coli KTE223]
gi|433014973|ref|ZP_20203312.1| DNA mismatch repair protein mutS [Escherichia coli KTE104]
gi|433029622|ref|ZP_20217476.1| DNA mismatch repair protein mutS [Escherichia coli KTE109]
gi|433039694|ref|ZP_20227290.1| DNA mismatch repair protein mutS [Escherichia coli KTE113]
gi|433059180|ref|ZP_20246220.1| DNA mismatch repair protein mutS [Escherichia coli KTE124]
gi|433083603|ref|ZP_20270057.1| DNA mismatch repair protein mutS [Escherichia coli KTE133]
gi|433088379|ref|ZP_20274746.1| DNA mismatch repair protein mutS [Escherichia coli KTE137]
gi|433097503|ref|ZP_20283684.1| DNA mismatch repair protein mutS [Escherichia coli KTE139]
gi|433102276|ref|ZP_20288353.1| DNA mismatch repair protein mutS [Escherichia coli KTE145]
gi|433106947|ref|ZP_20292917.1| DNA mismatch repair protein mutS [Escherichia coli KTE148]
gi|433116584|ref|ZP_20302371.1| DNA mismatch repair protein mutS [Escherichia coli KTE153]
gi|433126254|ref|ZP_20311807.1| DNA mismatch repair protein mutS [Escherichia coli KTE160]
gi|433140322|ref|ZP_20325573.1| DNA mismatch repair protein mutS [Escherichia coli KTE167]
gi|433145292|ref|ZP_20330431.1| DNA mismatch repair protein mutS [Escherichia coli KTE168]
gi|433150241|ref|ZP_20335256.1| DNA mismatch repair protein mutS [Escherichia coli KTE174]
gi|433189476|ref|ZP_20373569.1| DNA mismatch repair protein mutS [Escherichia coli KTE88]
gi|433199431|ref|ZP_20383323.1| DNA mismatch repair protein mutS [Escherichia coli KTE94]
gi|433208818|ref|ZP_20392490.1| DNA mismatch repair protein mutS [Escherichia coli KTE97]
gi|433213602|ref|ZP_20397190.1| DNA mismatch repair protein mutS [Escherichia coli KTE99]
gi|442603609|ref|ZP_21018480.1| DNA mismatch repair protein MutS [Escherichia coli Nissle 1917]
gi|30173066|sp|Q8FEL3.1|MUTS_ECOL6 RecName: Full=DNA mismatch repair protein MutS
gi|26109540|gb|AAN81743.1|AE016765_145 DNA mismatch repair protein mutS [Escherichia coli CFT073]
gi|222034428|emb|CAP77170.1| DNA mismatch repair protein mutS [Escherichia coli LF82]
gi|227834542|gb|EEJ45008.1| DNA mismatch repair protein [Escherichia coli 83972]
gi|281179737|dbj|BAI56067.1| DNA mismatch repair protein MutS [Escherichia coli SE15]
gi|300298739|gb|EFJ55124.1| DNA mismatch repair protein MutS [Escherichia coli MS 185-1]
gi|300409992|gb|EFJ93530.1| DNA mismatch repair protein MutS [Escherichia coli MS 45-1]
gi|305854425|gb|EFM54863.1| DNA mismatch repair protein MutS [Escherichia coli NC101]
gi|307554710|gb|ADN47485.1| DNA mismatch repair protein MutS [Escherichia coli ABU 83972]
gi|312947263|gb|ADR28090.1| DNA mismatch repair protein MutS [Escherichia coli O83:H1 str. NRG
857C]
gi|315293708|gb|EFU53060.1| DNA mismatch repair protein MutS [Escherichia coli MS 153-1]
gi|315298777|gb|EFU58031.1| DNA mismatch repair protein MutS [Escherichia coli MS 16-3]
gi|320194869|gb|EFW69498.1| DNA mismatch repair protein MutS [Escherichia coli WV_060327]
gi|323188852|gb|EFZ74137.1| DNA mismatch repair protein MutS [Escherichia coli RN587/1]
gi|330908765|gb|EGH37279.1| DNA mismatch repair protein MutS [Escherichia coli AA86]
gi|331042200|gb|EGI14342.1| DNA mismatch repair protein MutS [Escherichia coli M605]
gi|331053426|gb|EGI25455.1| DNA mismatch repair protein MutS [Escherichia coli TA206]
gi|333970799|gb|AEG37604.1| DNA mismatch repair protein [Escherichia coli NA114]
gi|355421370|gb|AER85567.1| DNA mismatch repair protein MutS [Escherichia coli str. 'clone D
i2']
gi|355426290|gb|AER90486.1| DNA mismatch repair protein MutS [Escherichia coli str. 'clone D
i14']
gi|380346997|gb|EIA35286.1| DNA mismatch repair protein MutS [Escherichia coli SCI-07]
gi|386246537|gb|EII88267.1| DNA mismatch repair protein MutS [Escherichia coli 3003]
gi|386250933|gb|EII97100.1| DNA mismatch repair protein MutS [Escherichia coli TW07793]
gi|408200070|gb|EKI25258.1| DNA mismatch repair protein MutS [Escherichia coli ARS4.2123]
gi|430904945|gb|ELC26626.1| DNA mismatch repair protein mutS [Escherichia coli KTE16]
gi|430906172|gb|ELC27773.1| DNA mismatch repair protein mutS [Escherichia coli KTE15]
gi|430934319|gb|ELC54686.1| DNA mismatch repair protein mutS [Escherichia coli KTE39]
gi|430951116|gb|ELC70336.1| DNA mismatch repair protein mutS [Escherichia coli KTE187]
gi|430961589|gb|ELC79596.1| DNA mismatch repair protein mutS [Escherichia coli KTE188]
gi|430965406|gb|ELC82827.1| DNA mismatch repair protein mutS [Escherichia coli KTE189]
gi|430981042|gb|ELC97782.1| DNA mismatch repair protein mutS [Escherichia coli KTE201]
gi|431022445|gb|ELD35706.1| DNA mismatch repair protein mutS [Escherichia coli KTE214]
gi|431027559|gb|ELD40621.1| DNA mismatch repair protein mutS [Escherichia coli KTE216]
gi|431037012|gb|ELD48000.1| DNA mismatch repair protein mutS [Escherichia coli KTE220]
gi|431040369|gb|ELD50904.1| DNA mismatch repair protein mutS [Escherichia coli KTE224]
gi|431050564|gb|ELD60309.1| DNA mismatch repair protein mutS [Escherichia coli KTE230]
gi|431090098|gb|ELD95871.1| DNA mismatch repair protein mutS [Escherichia coli KTE49]
gi|431098870|gb|ELE04176.1| DNA mismatch repair protein mutS [Escherichia coli KTE53]
gi|431126313|gb|ELE28660.1| DNA mismatch repair protein mutS [Escherichia coli KTE60]
gi|431136657|gb|ELE38513.1| DNA mismatch repair protein mutS [Escherichia coli KTE67]
gi|431146895|gb|ELE48318.1| DNA mismatch repair protein mutS [Escherichia coli KTE72]
gi|431178611|gb|ELE78518.1| DNA mismatch repair protein mutS [Escherichia coli KTE86]
gi|431189319|gb|ELE88742.1| DNA mismatch repair protein mutS [Escherichia coli KTE87]
gi|431189658|gb|ELE89077.1| DNA mismatch repair protein mutS [Escherichia coli KTE93]
gi|431232930|gb|ELF28532.1| DNA mismatch repair protein mutS [Escherichia coli KTE162]
gi|431242368|gb|ELF36788.1| DNA mismatch repair protein mutS [Escherichia coli KTE169]
gi|431256908|gb|ELF49842.1| DNA mismatch repair protein mutS [Escherichia coli KTE6]
gi|431290628|gb|ELF81163.1| DNA mismatch repair protein mutS [Escherichia coli KTE43]
gi|431327766|gb|ELG15086.1| DNA mismatch repair protein mutS [Escherichia coli KTE63]
gi|431393887|gb|ELG77433.1| DNA mismatch repair protein mutS [Escherichia coli KTE141]
gi|431424979|gb|ELH07054.1| DNA mismatch repair protein mutS [Escherichia coli KTE192]
gi|431430479|gb|ELH12310.1| DNA mismatch repair protein mutS [Escherichia coli KTE194]
gi|431440016|gb|ELH21346.1| DNA mismatch repair protein mutS [Escherichia coli KTE173]
gi|431442399|gb|ELH23488.1| DNA mismatch repair protein mutS [Escherichia coli KTE175]
gi|431462163|gb|ELH42380.1| DNA mismatch repair protein mutS [Escherichia coli KTE183]
gi|431480325|gb|ELH60045.1| DNA mismatch repair protein mutS [Escherichia coli KTE207]
gi|431486912|gb|ELH66557.1| DNA mismatch repair protein mutS [Escherichia coli KTE209]
gi|431490185|gb|ELH69802.1| DNA mismatch repair protein mutS [Escherichia coli KTE211]
gi|431498227|gb|ELH77440.1| DNA mismatch repair protein mutS [Escherichia coli KTE215]
gi|431503945|gb|ELH82677.1| DNA mismatch repair protein mutS [Escherichia coli KTE218]
gi|431507482|gb|ELH85767.1| DNA mismatch repair protein mutS [Escherichia coli KTE223]
gi|431529290|gb|ELI05992.1| DNA mismatch repair protein mutS [Escherichia coli KTE104]
gi|431542171|gb|ELI17410.1| DNA mismatch repair protein mutS [Escherichia coli KTE109]
gi|431550092|gb|ELI24089.1| DNA mismatch repair protein mutS [Escherichia coli KTE113]
gi|431567822|gb|ELI40814.1| DNA mismatch repair protein mutS [Escherichia coli KTE124]
gi|431600359|gb|ELI70030.1| DNA mismatch repair protein mutS [Escherichia coli KTE133]
gi|431603395|gb|ELI72820.1| DNA mismatch repair protein mutS [Escherichia coli KTE137]
gi|431614480|gb|ELI83633.1| DNA mismatch repair protein mutS [Escherichia coli KTE139]
gi|431617855|gb|ELI86844.1| DNA mismatch repair protein mutS [Escherichia coli KTE145]
gi|431625860|gb|ELI94417.1| DNA mismatch repair protein mutS [Escherichia coli KTE148]
gi|431632600|gb|ELJ00887.1| DNA mismatch repair protein mutS [Escherichia coli KTE153]
gi|431643005|gb|ELJ10709.1| DNA mismatch repair protein mutS [Escherichia coli KTE160]
gi|431658669|gb|ELJ25580.1| DNA mismatch repair protein mutS [Escherichia coli KTE167]
gi|431660450|gb|ELJ27322.1| DNA mismatch repair protein mutS [Escherichia coli KTE168]
gi|431669473|gb|ELJ35896.1| DNA mismatch repair protein mutS [Escherichia coli KTE174]
gi|431704303|gb|ELJ68931.1| DNA mismatch repair protein mutS [Escherichia coli KTE88]
gi|431719553|gb|ELJ83607.1| DNA mismatch repair protein mutS [Escherichia coli KTE94]
gi|431729266|gb|ELJ92901.1| DNA mismatch repair protein mutS [Escherichia coli KTE97]
gi|431733515|gb|ELJ96950.1| DNA mismatch repair protein mutS [Escherichia coli KTE99]
gi|441715654|emb|CCQ04457.1| DNA mismatch repair protein MutS [Escherichia coli Nissle 1917]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|358054512|dbj|GAA99438.1| hypothetical protein E5Q_06137 [Mixia osmundae IAM 14324]
Length = 1242
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/126 (33%), Positives = 60/126 (47%), Gaps = 10/126 (7%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD LA+L VL NS +EGTLI L CVT FG RML+ + +PL AI R +
Sbjct: 643 VLDGQTLAHLEVLQNSQGGSEGTLISLLSRCVTPFGTRMLKGWVCQPLRAASAINARLEI 702
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGA 120
++ L++ K + DLER++ R+ A ++ DR+ T
Sbjct: 703 VACLIEHADFANTFEKATKTMPDLERLI----------SRIHAGTIKTKDFDRVVTCFEQ 752
Query: 121 KDNLSG 126
D L G
Sbjct: 753 IDRLLG 758
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 45/71 (63%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
R + +T ++ GC VPA + L+PVD I TRMGA+D + ST+ E+ +++ I+ A
Sbjct: 1005 RSVAIATIMAQIGCFVPASAAKLSPVDTILTRMGAQDQIYANASTFKVEMDDTKKILSDA 1064
Query: 146 SKYSLALVDEL 156
S SL ++DEL
Sbjct: 1065 SMSSLVILDEL 1075
>gi|335424598|ref|ZP_08553606.1| DNA mismatch repair protein MutS [Salinisphaera shabanensis E1L3A]
gi|334888936|gb|EGM27231.1| DNA mismatch repair protein MutS [Salinisphaera shabanensis E1L3A]
Length = 875
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPA++ T+ P+DRIFTR+GA D+LS QST++ E++E+ I+ HA++ SL
Sbjct: 642 VLLTHIGSFVPAEAATIGPLDRIFTRIGAGDDLSAGQSTFMVEMSETAQILHHATERSLV 701
Query: 152 LVDEL 156
L+DE+
Sbjct: 702 LLDEI 706
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 47/87 (54%), Gaps = 2/87 (2%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD++ NL + ++ T +L+ LD C T G R LR L +PL N D ++ R A
Sbjct: 278 VLDASTRRNLEIERSASGDTRHSLVGLLDRCATPMGARALRRWLAEPLRNFDILRHRHLA 337
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERM 87
I LL H + ++K++ D+ER+
Sbjct: 338 IETLLSGSHAG--LSERLKEIPDVERI 362
>gi|386615446|ref|YP_006135112.1| DNA mismatch repair protein MutS [Escherichia coli UMNK88]
gi|417630033|ref|ZP_12280269.1| DNA mismatch repair protein MutS [Escherichia coli STEC_MHI813]
gi|422835959|ref|ZP_16884010.1| DNA mismatch repair protein mutS [Escherichia coli E101]
gi|422970123|ref|ZP_16973916.1| DNA mismatch repair protein mutS [Escherichia coli TA124]
gi|432450866|ref|ZP_19693126.1| DNA mismatch repair protein mutS [Escherichia coli KTE193]
gi|432948786|ref|ZP_20143709.1| DNA mismatch repair protein mutS [Escherichia coli KTE196]
gi|433034550|ref|ZP_20222254.1| DNA mismatch repair protein mutS [Escherichia coli KTE112]
gi|433044262|ref|ZP_20231751.1| DNA mismatch repair protein mutS [Escherichia coli KTE117]
gi|332344615|gb|AEE57949.1| DNA mismatch repair protein MutS [Escherichia coli UMNK88]
gi|345371604|gb|EGX03573.1| DNA mismatch repair protein MutS [Escherichia coli STEC_MHI813]
gi|371600501|gb|EHN89273.1| DNA mismatch repair protein mutS [Escherichia coli TA124]
gi|371611326|gb|EHN99850.1| DNA mismatch repair protein mutS [Escherichia coli E101]
gi|430978800|gb|ELC95601.1| DNA mismatch repair protein mutS [Escherichia coli KTE193]
gi|431455418|gb|ELH35773.1| DNA mismatch repair protein mutS [Escherichia coli KTE196]
gi|431548829|gb|ELI22921.1| DNA mismatch repair protein mutS [Escherichia coli KTE112]
gi|431554792|gb|ELI28668.1| DNA mismatch repair protein mutS [Escherichia coli KTE117]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T ++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAGLQPVLRQVGDLERIL 352
>gi|424815196|ref|ZP_18240347.1| DNA mismatch repair protein MutS [Escherichia fergusonii ECD227]
gi|325496216|gb|EGC94075.1| DNA mismatch repair protein MutS [Escherichia fergusonii ECD227]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I VL D T +++ ++ + DLER+L
Sbjct: 328 IGVLQD---FTTELQPVLRQVGDLERIL 352
>gi|422383082|ref|ZP_16463234.1| DNA mismatch repair protein MutS [Escherichia coli MS 57-2]
gi|432733476|ref|ZP_19968302.1| DNA mismatch repair protein mutS [Escherichia coli KTE45]
gi|432760562|ref|ZP_19995053.1| DNA mismatch repair protein mutS [Escherichia coli KTE46]
gi|324005697|gb|EGB74916.1| DNA mismatch repair protein MutS [Escherichia coli MS 57-2]
gi|431273242|gb|ELF64328.1| DNA mismatch repair protein mutS [Escherichia coli KTE45]
gi|431306802|gb|ELF95107.1| DNA mismatch repair protein mutS [Escherichia coli KTE46]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|110642871|ref|YP_670601.1| DNA mismatch repair protein MutS [Escherichia coli 536]
gi|191171138|ref|ZP_03032688.1| DNA mismatch repair protein MutS [Escherichia coli F11]
gi|300976220|ref|ZP_07173317.1| DNA mismatch repair protein MutS [Escherichia coli MS 200-1]
gi|422373349|ref|ZP_16453662.1| DNA mismatch repair protein MutS [Escherichia coli MS 60-1]
gi|432472032|ref|ZP_19714072.1| DNA mismatch repair protein mutS [Escherichia coli KTE206]
gi|432714441|ref|ZP_19949474.1| DNA mismatch repair protein mutS [Escherichia coli KTE8]
gi|433078879|ref|ZP_20265403.1| DNA mismatch repair protein mutS [Escherichia coli KTE131]
gi|123147783|sp|Q0TEC9.1|MUTS_ECOL5 RecName: Full=DNA mismatch repair protein MutS
gi|110344463|gb|ABG70700.1| DNA mismatch repair protein MutS [Escherichia coli 536]
gi|190908438|gb|EDV68027.1| DNA mismatch repair protein MutS [Escherichia coli F11]
gi|300308565|gb|EFJ63085.1| DNA mismatch repair protein MutS [Escherichia coli MS 200-1]
gi|324015283|gb|EGB84502.1| DNA mismatch repair protein MutS [Escherichia coli MS 60-1]
gi|430996663|gb|ELD12938.1| DNA mismatch repair protein mutS [Escherichia coli KTE206]
gi|431255020|gb|ELF48279.1| DNA mismatch repair protein mutS [Escherichia coli KTE8]
gi|431595277|gb|ELI65344.1| DNA mismatch repair protein mutS [Escherichia coli KTE131]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|52855250|gb|AAU88499.1| DNA mismatch repair protein [Escherichia coli]
Length = 188
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 65 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 124
Query: 153 VDEL 156
+DE+
Sbjct: 125 MDEI 128
>gi|52698264|gb|AAU86869.1| DNA mismatch repair protein [Shigella dysenteriae]
Length = 184
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+
Sbjct: 71 MAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLM 130
Query: 154 DEL 156
DE+
Sbjct: 131 DEI 133
>gi|52698276|gb|AAU86875.1| DNA mismatch repair protein [Escherichia coli]
gi|52855234|gb|AAU88491.1| DNA mismatch repair protein [Escherichia coli]
Length = 192
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 69 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 128
Query: 153 VDEL 156
+DE+
Sbjct: 129 MDEI 132
>gi|45645397|gb|AAS73298.1| DNA mismatch repair protein [Haemophilus influenzae]
Length = 860
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPAD+ + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 632 TLLAYIGSFVPADNARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEQSLV 691
Query: 152 LVDEL 156
L+DE+
Sbjct: 692 LIDEI 696
Score = 55.1 bits (131), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 53/87 (60%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ AI
Sbjct: 268 LDAATRRNLELTQNLSGGTENTLASVLDKCVTPMGSRLLKRWIHQPIRDVEKLKQRQQAI 327
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 328 AEILN-FDLVDELQPYLQLVGDMERIL 353
>gi|432466879|ref|ZP_19708965.1| DNA mismatch repair protein mutS [Escherichia coli KTE205]
gi|432582187|ref|ZP_19818601.1| DNA mismatch repair protein mutS [Escherichia coli KTE57]
gi|433073923|ref|ZP_20260571.1| DNA mismatch repair protein mutS [Escherichia coli KTE129]
gi|433121262|ref|ZP_20306928.1| DNA mismatch repair protein mutS [Escherichia coli KTE157]
gi|433184398|ref|ZP_20368640.1| DNA mismatch repair protein mutS [Escherichia coli KTE85]
gi|430992676|gb|ELD09045.1| DNA mismatch repair protein mutS [Escherichia coli KTE205]
gi|431122469|gb|ELE25338.1| DNA mismatch repair protein mutS [Escherichia coli KTE57]
gi|431586534|gb|ELI57926.1| DNA mismatch repair protein mutS [Escherichia coli KTE129]
gi|431641095|gb|ELJ08839.1| DNA mismatch repair protein mutS [Escherichia coli KTE157]
gi|431704499|gb|ELJ69125.1| DNA mismatch repair protein mutS [Escherichia coli KTE85]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|74313299|ref|YP_311718.1| DNA mismatch repair protein MutS [Shigella sonnei Ss046]
gi|193064985|ref|ZP_03046060.1| DNA mismatch repair protein MutS [Escherichia coli E22]
gi|194427839|ref|ZP_03060385.1| DNA mismatch repair protein MutS [Escherichia coli B171]
gi|218696327|ref|YP_002403994.1| DNA mismatch repair protein MutS [Escherichia coli 55989]
gi|260845376|ref|YP_003223154.1| methyl-directed mismatch repair protein MutS [Escherichia coli
O103:H2 str. 12009]
gi|260856840|ref|YP_003230731.1| DNA mismatch repair protein MutS [Escherichia coli O26:H11 str.
11368]
gi|260869408|ref|YP_003235810.1| methyl-directed mismatch repair protein MutS [Escherichia coli
O111:H- str. 11128]
gi|300919230|ref|ZP_07135753.1| DNA mismatch repair protein MutS [Escherichia coli MS 115-1]
gi|301306148|ref|ZP_07212224.1| DNA mismatch repair protein MutS [Escherichia coli MS 124-1]
gi|383179880|ref|YP_005457885.1| DNA mismatch repair protein MutS [Shigella sonnei 53G]
gi|407470598|ref|YP_006782959.1| DNA mismatch repair protein MutS [Escherichia coli O104:H4 str.
2009EL-2071]
gi|407480740|ref|YP_006777889.1| DNA mismatch repair protein MutS [Escherichia coli O104:H4 str.
2011C-3493]
gi|410481306|ref|YP_006768852.1| DNA mismatch repair protein MutS [Escherichia coli O104:H4 str.
2009EL-2050]
gi|415786513|ref|ZP_11493591.1| DNA mismatch repair protein MutS [Escherichia coli EPECa14]
gi|415811719|ref|ZP_11504032.1| DNA mismatch repair protein MutS [Escherichia coli LT-68]
gi|415818409|ref|ZP_11508131.1| DNA mismatch repair protein MutS [Escherichia coli OK1180]
gi|415830162|ref|ZP_11516064.1| DNA mismatch repair protein MutS [Escherichia coli OK1357]
gi|415864979|ref|ZP_11537926.1| DNA mismatch repair protein MutS [Escherichia coli MS 85-1]
gi|417123412|ref|ZP_11972322.1| DNA mismatch repair protein MutS [Escherichia coli 97.0246]
gi|417166514|ref|ZP_11999870.1| DNA mismatch repair protein MutS [Escherichia coli 99.0741]
gi|417174945|ref|ZP_12004741.1| DNA mismatch repair protein MutS [Escherichia coli 3.2608]
gi|417185961|ref|ZP_12011104.1| DNA mismatch repair protein MutS [Escherichia coli 93.0624]
gi|417200116|ref|ZP_12017353.1| DNA mismatch repair protein MutS [Escherichia coli 4.0522]
gi|417211453|ref|ZP_12021752.1| DNA mismatch repair protein MutS [Escherichia coli JB1-95]
gi|417220920|ref|ZP_12024360.1| DNA mismatch repair protein MutS [Escherichia coli 96.154]
gi|417229044|ref|ZP_12030802.1| DNA mismatch repair protein MutS [Escherichia coli 5.0959]
gi|417237207|ref|ZP_12035174.1| DNA mismatch repair protein MutS [Escherichia coli 9.0111]
gi|417296005|ref|ZP_12083252.1| DNA mismatch repair protein MutS [Escherichia coli 900105 (10e)]
gi|417593053|ref|ZP_12243746.1| DNA mismatch repair protein MutS [Escherichia coli 2534-86]
gi|417603388|ref|ZP_12253955.1| DNA mismatch repair protein MutS [Escherichia coli STEC_94C]
gi|417609345|ref|ZP_12259845.1| DNA mismatch repair protein MutS [Escherichia coli STEC_DG131-3]
gi|417624706|ref|ZP_12275003.1| DNA mismatch repair protein MutS [Escherichia coli STEC_H.1.8]
gi|417640510|ref|ZP_12290650.1| DNA mismatch repair protein MutS [Escherichia coli TX1999]
gi|417806251|ref|ZP_12453196.1| DNA mismatch repair protein MutS [Escherichia coli O104:H4 str.
LB226692]
gi|417834003|ref|ZP_12480450.1| DNA mismatch repair protein MutS [Escherichia coli O104:H4 str.
01-09591]
gi|417866795|ref|ZP_12511835.1| hypothetical protein C22711_3723 [Escherichia coli O104:H4 str.
C227-11]
gi|418041403|ref|ZP_12679628.1| DNA mismatch repair protein MutS [Escherichia coli W26]
gi|418267832|ref|ZP_12886786.1| DNA mismatch repair protein MutS [Shigella sonnei str. Moseley]
gi|419171423|ref|ZP_13715308.1| DNA mismatch repair protein MutS [Escherichia coli DEC7A]
gi|419182058|ref|ZP_13725669.1| DNA mismatch repair protein MutS [Escherichia coli DEC7C]
gi|419187509|ref|ZP_13731019.1| DNA mismatch repair protein MutS [Escherichia coli DEC7D]
gi|419192801|ref|ZP_13736252.1| DNA mismatch repair protein MutS [Escherichia coli DEC7E]
gi|419198306|ref|ZP_13741633.1| DNA mismatch repair protein MutS [Escherichia coli DEC8A]
gi|419204709|ref|ZP_13747885.1| DNA mismatch repair protein MutS [Escherichia coli DEC8B]
gi|419211049|ref|ZP_13754122.1| DNA mismatch repair protein MutS [Escherichia coli DEC8C]
gi|419216984|ref|ZP_13759980.1| DNA mismatch repair protein MutS [Escherichia coli DEC8D]
gi|419222728|ref|ZP_13765645.1| DNA mismatch repair protein MutS [Escherichia coli DEC8E]
gi|419228137|ref|ZP_13770985.1| DNA mismatch repair protein MutS [Escherichia coli DEC9A]
gi|419234059|ref|ZP_13776831.1| DNA mismatch repair protein MutS [Escherichia coli DEC9B]
gi|419239135|ref|ZP_13781846.1| DNA mismatch repair protein MutS [Escherichia coli DEC9C]
gi|419244651|ref|ZP_13787286.1| DNA mismatch repair protein MutS [Escherichia coli DEC9D]
gi|419250456|ref|ZP_13793029.1| DNA mismatch repair protein MutS [Escherichia coli DEC9E]
gi|419256257|ref|ZP_13798764.1| DNA mismatch repair protein MutS [Escherichia coli DEC10A]
gi|419262554|ref|ZP_13804965.1| DNA mismatch repair protein MutS [Escherichia coli DEC10B]
gi|419268876|ref|ZP_13811221.1| DNA mismatch repair protein MutS [Escherichia coli DEC10C]
gi|419285406|ref|ZP_13827575.1| DNA mismatch repair protein MutS [Escherichia coli DEC10F]
gi|419290740|ref|ZP_13832829.1| DNA mismatch repair protein MutS [Escherichia coli DEC11A]
gi|419296026|ref|ZP_13838069.1| DNA mismatch repair protein MutS [Escherichia coli DEC11B]
gi|419301478|ref|ZP_13843476.1| DNA mismatch repair protein MutS [Escherichia coli DEC11C]
gi|419307608|ref|ZP_13849506.1| DNA mismatch repair protein MutS [Escherichia coli DEC11D]
gi|419312622|ref|ZP_13854482.1| DNA mismatch repair protein MutS [Escherichia coli DEC11E]
gi|419318010|ref|ZP_13859811.1| DNA mismatch repair protein MutS [Escherichia coli DEC12A]
gi|419324298|ref|ZP_13865988.1| DNA mismatch repair protein MutS [Escherichia coli DEC12B]
gi|419335790|ref|ZP_13877312.1| DNA mismatch repair protein MutS [Escherichia coli DEC12D]
gi|419341149|ref|ZP_13882610.1| DNA mismatch repair protein MutS [Escherichia coli DEC12E]
gi|419392826|ref|ZP_13933629.1| DNA mismatch repair protein MutS [Escherichia coli DEC15A]
gi|419397806|ref|ZP_13938574.1| DNA mismatch repair protein MutS [Escherichia coli DEC15B]
gi|419403210|ref|ZP_13943930.1| DNA mismatch repair protein MutS [Escherichia coli DEC15C]
gi|419408377|ref|ZP_13949063.1| DNA mismatch repair protein MutS [Escherichia coli DEC15D]
gi|419413885|ref|ZP_13954530.1| DNA mismatch repair protein MutS [Escherichia coli DEC15E]
gi|419862123|ref|ZP_14384740.1| DNA mismatch repair protein MutS [Escherichia coli O103:H25 str.
CVM9340]
gi|419867568|ref|ZP_14389883.1| DNA mismatch repair protein MutS [Escherichia coli O103:H2 str.
CVM9450]
gi|419875097|ref|ZP_14396978.1| DNA mismatch repair protein MutS [Escherichia coli O111:H11 str.
CVM9534]
gi|419886523|ref|ZP_14407163.1| DNA mismatch repair protein MutS [Escherichia coli O111:H8 str.
CVM9570]
gi|419892962|ref|ZP_14412969.1| DNA mismatch repair protein MutS [Escherichia coli O111:H8 str.
CVM9574]
gi|419903206|ref|ZP_14422310.1| DNA mismatch repair protein MutS [Escherichia coli O26:H11 str.
CVM9942]
gi|419907458|ref|ZP_14426281.1| methyl-directed mismatch repair protein MutS [Escherichia coli
O26:H11 str. CVM10026]
gi|419922491|ref|ZP_14440504.1| DNA mismatch repair protein MutS [Escherichia coli 541-15]
gi|419948450|ref|ZP_14464746.1| DNA mismatch repair protein MutS [Escherichia coli CUMT8]
gi|420092319|ref|ZP_14604033.1| DNA mismatch repair protein MutS [Escherichia coli O111:H8 str.
CVM9602]
gi|420097727|ref|ZP_14609019.1| DNA mismatch repair protein MutS [Escherichia coli O111:H8 str.
CVM9634]
gi|420100082|ref|ZP_14611275.1| DNA mismatch repair protein MutS [Escherichia coli O111:H11 str.
CVM9455]
gi|420107546|ref|ZP_14617879.1| DNA mismatch repair protein MutS [Escherichia coli O111:H11 str.
CVM9553]
gi|420115147|ref|ZP_14624724.1| DNA mismatch repair protein MutS [Escherichia coli O26:H11 str.
CVM10021]
gi|420123359|ref|ZP_14632251.1| DNA mismatch repair protein MutS [Escherichia coli O26:H11 str.
CVM10030]
gi|420128848|ref|ZP_14637396.1| DNA mismatch repair protein MutS [Escherichia coli O26:H11 str.
CVM10224]
gi|420133407|ref|ZP_14641643.1| DNA mismatch repair protein MutS [Escherichia coli O26:H11 str.
CVM9952]
gi|420360027|ref|ZP_14860990.1| DNA mismatch repair protein MutS [Shigella sonnei 3226-85]
gi|420386815|ref|ZP_14886162.1| DNA mismatch repair protein MutS [Escherichia coli EPECa12]
gi|420392700|ref|ZP_14891948.1| DNA mismatch repair protein MutS [Escherichia coli EPEC C342-62]
gi|421777344|ref|ZP_16213941.1| DNA mismatch repair protein MutS [Escherichia coli AD30]
gi|422988827|ref|ZP_16979600.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
C227-11]
gi|422995719|ref|ZP_16986483.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
C236-11]
gi|423000867|ref|ZP_16991621.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
09-7901]
gi|423004536|ref|ZP_16995282.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
04-8351]
gi|423011036|ref|ZP_17001770.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-3677]
gi|423020264|ref|ZP_17010973.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-4404]
gi|423025430|ref|ZP_17016127.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-4522]
gi|423031251|ref|ZP_17021938.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-4623]
gi|423039076|ref|ZP_17029750.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-4632 C1]
gi|423044196|ref|ZP_17034863.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-4632 C2]
gi|423045924|ref|ZP_17036584.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-4632 C3]
gi|423054463|ref|ZP_17043270.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-4632 C4]
gi|423061438|ref|ZP_17050234.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-4632 C5]
gi|424754129|ref|ZP_18182049.1| DNA mismatch repair protein MutS [Escherichia coli O26:H11 str.
CFSAN001629]
gi|424763310|ref|ZP_18190788.1| DNA mismatch repair protein MutS [Escherichia coli O111:H11 str.
CFSAN001630]
gi|424773026|ref|ZP_18200107.1| DNA mismatch repair protein MutS [Escherichia coli O111:H8 str.
CFSAN001632]
gi|425289859|ref|ZP_18680693.1| DNA mismatch repair protein MutS [Escherichia coli 3006]
gi|425380907|ref|ZP_18764917.1| DNA mismatch repair protein MutS [Escherichia coli EC1865]
gi|425423544|ref|ZP_18804707.1| DNA mismatch repair protein MutS [Escherichia coli 0.1288]
gi|427805889|ref|ZP_18972956.1| methyl-directed mismatch repair [Escherichia coli chi7122]
gi|427810480|ref|ZP_18977545.1| methyl-directed mismatch repair [Escherichia coli]
gi|429720293|ref|ZP_19255220.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429772193|ref|ZP_19304213.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-02030]
gi|429777140|ref|ZP_19309114.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-02033-1]
gi|429785865|ref|ZP_19317760.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-02092]
gi|429791755|ref|ZP_19323609.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-02093]
gi|429792603|ref|ZP_19324452.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-02281]
gi|429799179|ref|ZP_19330977.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-02318]
gi|429802796|ref|ZP_19334556.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-02913]
gi|429812592|ref|ZP_19344275.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-03439]
gi|429813140|ref|ZP_19344819.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-04080]
gi|429818347|ref|ZP_19349982.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-03943]
gi|429904699|ref|ZP_19370678.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429908837|ref|ZP_19374801.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429914709|ref|ZP_19380656.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429919739|ref|ZP_19385670.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429925559|ref|ZP_19391472.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429929495|ref|ZP_19395397.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429936034|ref|ZP_19401920.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429941714|ref|ZP_19407588.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429944395|ref|ZP_19410257.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429951953|ref|ZP_19417799.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429955302|ref|ZP_19421134.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec12-0466]
gi|432751145|ref|ZP_19985745.1| DNA mismatch repair protein mutS [Escherichia coli KTE29]
gi|432766074|ref|ZP_20000496.1| DNA mismatch repair protein mutS [Escherichia coli KTE48]
gi|432968778|ref|ZP_20157691.1| DNA mismatch repair protein mutS [Escherichia coli KTE203]
gi|433131249|ref|ZP_20316681.1| DNA mismatch repair protein mutS [Escherichia coli KTE163]
gi|433135910|ref|ZP_20321248.1| DNA mismatch repair protein mutS [Escherichia coli KTE166]
gi|443618760|ref|YP_007382616.1| DNA mismatch repair protein MutS [Escherichia coli APEC O78]
gi|110826509|sp|Q3YYC9.1|MUTS_SHISS RecName: Full=DNA mismatch repair protein MutS
gi|254766627|sp|B7LEE7.1|MUTS_ECO55 RecName: Full=DNA mismatch repair protein MutS
gi|73856776|gb|AAZ89483.1| methyl-directed mismatch repair [Shigella sonnei Ss046]
gi|192927282|gb|EDV81901.1| DNA mismatch repair protein MutS [Escherichia coli E22]
gi|194414072|gb|EDX30348.1| DNA mismatch repair protein MutS [Escherichia coli B171]
gi|218353059|emb|CAU98884.1| methyl-directed mismatch repair protein [Escherichia coli 55989]
gi|257755489|dbj|BAI26991.1| methyl-directed mismatch repair protein MutS [Escherichia coli
O26:H11 str. 11368]
gi|257760523|dbj|BAI32020.1| methyl-directed mismatch repair protein MutS [Escherichia coli
O103:H2 str. 12009]
gi|257765764|dbj|BAI37259.1| methyl-directed mismatch repair protein MutS [Escherichia coli
O111:H- str. 11128]
gi|300413675|gb|EFJ96985.1| DNA mismatch repair protein MutS [Escherichia coli MS 115-1]
gi|300838580|gb|EFK66340.1| DNA mismatch repair protein MutS [Escherichia coli MS 124-1]
gi|315254517|gb|EFU34485.1| DNA mismatch repair protein MutS [Escherichia coli MS 85-1]
gi|323154950|gb|EFZ41142.1| DNA mismatch repair protein MutS [Escherichia coli EPECa14]
gi|323172978|gb|EFZ58609.1| DNA mismatch repair protein MutS [Escherichia coli LT-68]
gi|323180155|gb|EFZ65707.1| DNA mismatch repair protein MutS [Escherichia coli OK1180]
gi|323183261|gb|EFZ68658.1| DNA mismatch repair protein MutS [Escherichia coli OK1357]
gi|340733647|gb|EGR62778.1| DNA mismatch repair protein MutS [Escherichia coli O104:H4 str.
01-09591]
gi|340739158|gb|EGR73394.1| DNA mismatch repair protein MutS [Escherichia coli O104:H4 str.
LB226692]
gi|341920084|gb|EGT69693.1| hypothetical protein C22711_3723 [Escherichia coli O104:H4 str.
C227-11]
gi|345335145|gb|EGW67584.1| DNA mismatch repair protein MutS [Escherichia coli 2534-86]
gi|345348910|gb|EGW81201.1| DNA mismatch repair protein MutS [Escherichia coli STEC_94C]
gi|345356556|gb|EGW88757.1| DNA mismatch repair protein MutS [Escherichia coli STEC_DG131-3]
gi|345376472|gb|EGX08410.1| DNA mismatch repair protein MutS [Escherichia coli STEC_H.1.8]
gi|345392911|gb|EGX22690.1| DNA mismatch repair protein MutS [Escherichia coli TX1999]
gi|354862554|gb|EHF22992.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
C236-11]
gi|354867838|gb|EHF28260.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
C227-11]
gi|354868236|gb|EHF28654.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
04-8351]
gi|354873838|gb|EHF34215.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
09-7901]
gi|354880519|gb|EHF40855.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-3677]
gi|354888353|gb|EHF48612.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-4404]
gi|354892261|gb|EHF52470.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-4522]
gi|354893467|gb|EHF53670.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-4632 C1]
gi|354896270|gb|EHF56441.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-4623]
gi|354897647|gb|EHF57804.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-4632 C2]
gi|354911499|gb|EHF71503.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-4632 C5]
gi|354914623|gb|EHF74606.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-4632 C3]
gi|354916405|gb|EHF76377.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-4632 C4]
gi|378014397|gb|EHV77302.1| DNA mismatch repair protein MutS [Escherichia coli DEC7A]
gi|378022178|gb|EHV84865.1| DNA mismatch repair protein MutS [Escherichia coli DEC7C]
gi|378027427|gb|EHV90056.1| DNA mismatch repair protein MutS [Escherichia coli DEC7D]
gi|378037503|gb|EHW00030.1| DNA mismatch repair protein MutS [Escherichia coli DEC7E]
gi|378045504|gb|EHW07898.1| DNA mismatch repair protein MutS [Escherichia coli DEC8A]
gi|378046857|gb|EHW09230.1| DNA mismatch repair protein MutS [Escherichia coli DEC8B]
gi|378051594|gb|EHW13910.1| DNA mismatch repair protein MutS [Escherichia coli DEC8C]
gi|378059573|gb|EHW21772.1| DNA mismatch repair protein MutS [Escherichia coli DEC8D]
gi|378064173|gb|EHW26334.1| DNA mismatch repair protein MutS [Escherichia coli DEC8E]
gi|378072114|gb|EHW34177.1| DNA mismatch repair protein MutS [Escherichia coli DEC9A]
gi|378075866|gb|EHW37880.1| DNA mismatch repair protein MutS [Escherichia coli DEC9B]
gi|378082329|gb|EHW44274.1| DNA mismatch repair protein MutS [Escherichia coli DEC9C]
gi|378088613|gb|EHW50463.1| DNA mismatch repair protein MutS [Escherichia coli DEC9D]
gi|378092873|gb|EHW54692.1| DNA mismatch repair protein MutS [Escherichia coli DEC9E]
gi|378098944|gb|EHW60669.1| DNA mismatch repair protein MutS [Escherichia coli DEC10A]
gi|378104516|gb|EHW66174.1| DNA mismatch repair protein MutS [Escherichia coli DEC10B]
gi|378109382|gb|EHW70993.1| DNA mismatch repair protein MutS [Escherichia coli DEC10C]
gi|378128514|gb|EHW89896.1| DNA mismatch repair protein MutS [Escherichia coli DEC11A]
gi|378129436|gb|EHW90807.1| DNA mismatch repair protein MutS [Escherichia coli DEC10F]
gi|378140751|gb|EHX01974.1| DNA mismatch repair protein MutS [Escherichia coli DEC11B]
gi|378147570|gb|EHX08717.1| DNA mismatch repair protein MutS [Escherichia coli DEC11D]
gi|378149604|gb|EHX10726.1| DNA mismatch repair protein MutS [Escherichia coli DEC11C]
gi|378156699|gb|EHX17745.1| DNA mismatch repair protein MutS [Escherichia coli DEC11E]
gi|378163513|gb|EHX24465.1| DNA mismatch repair protein MutS [Escherichia coli DEC12B]
gi|378167807|gb|EHX28718.1| DNA mismatch repair protein MutS [Escherichia coli DEC12A]
gi|378180666|gb|EHX41347.1| DNA mismatch repair protein MutS [Escherichia coli DEC12D]
gi|378185698|gb|EHX46322.1| DNA mismatch repair protein MutS [Escherichia coli DEC12E]
gi|378235794|gb|EHX95849.1| DNA mismatch repair protein MutS [Escherichia coli DEC15A]
gi|378243927|gb|EHY03873.1| DNA mismatch repair protein MutS [Escherichia coli DEC15B]
gi|378245465|gb|EHY05402.1| DNA mismatch repair protein MutS [Escherichia coli DEC15C]
gi|378252938|gb|EHY12816.1| DNA mismatch repair protein MutS [Escherichia coli DEC15D]
gi|378258341|gb|EHY18164.1| DNA mismatch repair protein MutS [Escherichia coli DEC15E]
gi|383475739|gb|EID67693.1| DNA mismatch repair protein MutS [Escherichia coli W26]
gi|386146803|gb|EIG93248.1| DNA mismatch repair protein MutS [Escherichia coli 97.0246]
gi|386171671|gb|EIH43710.1| DNA mismatch repair protein MutS [Escherichia coli 99.0741]
gi|386177637|gb|EIH55116.1| DNA mismatch repair protein MutS [Escherichia coli 3.2608]
gi|386181953|gb|EIH64711.1| DNA mismatch repair protein MutS [Escherichia coli 93.0624]
gi|386187919|gb|EIH76732.1| DNA mismatch repair protein MutS [Escherichia coli 4.0522]
gi|386195027|gb|EIH89263.1| DNA mismatch repair protein MutS [Escherichia coli JB1-95]
gi|386200722|gb|EIH99712.1| DNA mismatch repair protein MutS [Escherichia coli 96.154]
gi|386208379|gb|EII12884.1| DNA mismatch repair protein MutS [Escherichia coli 5.0959]
gi|386214292|gb|EII24715.1| DNA mismatch repair protein MutS [Escherichia coli 9.0111]
gi|386259449|gb|EIJ14923.1| DNA mismatch repair protein MutS [Escherichia coli 900105 (10e)]
gi|388346064|gb|EIL11807.1| DNA mismatch repair protein MutS [Escherichia coli O103:H25 str.
CVM9340]
gi|388346641|gb|EIL12351.1| DNA mismatch repair protein MutS [Escherichia coli O103:H2 str.
CVM9450]
gi|388349675|gb|EIL15143.1| DNA mismatch repair protein MutS [Escherichia coli O111:H11 str.
CVM9534]
gi|388365398|gb|EIL29192.1| DNA mismatch repair protein MutS [Escherichia coli O111:H8 str.
CVM9570]
gi|388369123|gb|EIL32743.1| DNA mismatch repair protein MutS [Escherichia coli O111:H8 str.
CVM9574]
gi|388372256|gb|EIL35694.1| DNA mismatch repair protein MutS [Escherichia coli O26:H11 str.
CVM9942]
gi|388377003|gb|EIL39851.1| methyl-directed mismatch repair protein MutS [Escherichia coli
O26:H11 str. CVM10026]
gi|388396180|gb|EIL57308.1| DNA mismatch repair protein MutS [Escherichia coli 541-15]
gi|388421224|gb|EIL80842.1| DNA mismatch repair protein MutS [Escherichia coli CUMT8]
gi|391280275|gb|EIQ38949.1| DNA mismatch repair protein MutS [Shigella sonnei 3226-85]
gi|391304425|gb|EIQ62238.1| DNA mismatch repair protein MutS [Escherichia coli EPECa12]
gi|391311299|gb|EIQ68935.1| DNA mismatch repair protein MutS [Escherichia coli EPEC C342-62]
gi|394380621|gb|EJE58363.1| DNA mismatch repair protein MutS [Escherichia coli O111:H8 str.
CVM9602]
gi|394383422|gb|EJE61022.1| DNA mismatch repair protein MutS [Escherichia coli O111:H8 str.
CVM9634]
gi|394384577|gb|EJE62136.1| DNA mismatch repair protein MutS [Escherichia coli O26:H11 str.
CVM10224]
gi|394407279|gb|EJE82141.1| DNA mismatch repair protein MutS [Escherichia coli O26:H11 str.
CVM10021]
gi|394412466|gb|EJE86598.1| DNA mismatch repair protein MutS [Escherichia coli O111:H11 str.
CVM9553]
gi|394417195|gb|EJE90945.1| DNA mismatch repair protein MutS [Escherichia coli O26:H11 str.
CVM10030]
gi|394421816|gb|EJE95258.1| DNA mismatch repair protein MutS [Escherichia coli O111:H11 str.
CVM9455]
gi|394425667|gb|EJE98603.1| DNA mismatch repair protein MutS [Escherichia coli O26:H11 str.
CVM9952]
gi|397897937|gb|EJL14334.1| DNA mismatch repair protein MutS [Shigella sonnei str. Moseley]
gi|406776468|gb|AFS55892.1| DNA mismatch repair protein MutS [Escherichia coli O104:H4 str.
2009EL-2050]
gi|407053037|gb|AFS73088.1| DNA mismatch repair protein MutS [Escherichia coli O104:H4 str.
2011C-3493]
gi|407066633|gb|AFS87680.1| DNA mismatch repair protein MutS [Escherichia coli O104:H4 str.
2009EL-2071]
gi|408212364|gb|EKI36890.1| DNA mismatch repair protein MutS [Escherichia coli 3006]
gi|408295369|gb|EKJ13699.1| DNA mismatch repair protein MutS [Escherichia coli EC1865]
gi|408342407|gb|EKJ56834.1| DNA mismatch repair protein MutS [Escherichia coli 0.1288]
gi|408457644|gb|EKJ81438.1| DNA mismatch repair protein MutS [Escherichia coli AD30]
gi|412964071|emb|CCK47997.1| methyl-directed mismatch repair [Escherichia coli chi7122]
gi|412970659|emb|CCJ45309.1| methyl-directed mismatch repair [Escherichia coli]
gi|421934044|gb|EKT91822.1| DNA mismatch repair protein MutS [Escherichia coli O26:H11 str.
CFSAN001629]
gi|421937275|gb|EKT94892.1| DNA mismatch repair protein MutS [Escherichia coli O111:H8 str.
CFSAN001632]
gi|421940039|gb|EKT97519.1| DNA mismatch repair protein MutS [Escherichia coli O111:H11 str.
CFSAN001630]
gi|429347395|gb|EKY84168.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-02092]
gi|429358431|gb|EKY95100.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-02030]
gi|429360176|gb|EKY96835.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-02033-1]
gi|429360487|gb|EKY97145.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-02093]
gi|429363855|gb|EKZ00480.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-02318]
gi|429375900|gb|EKZ12432.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-02281]
gi|429377818|gb|EKZ14333.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-03439]
gi|429389463|gb|EKZ25883.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-02913]
gi|429393632|gb|EKZ30023.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-03943]
gi|429403301|gb|EKZ39585.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
11-04080]
gi|429405788|gb|EKZ42052.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec11-9990]
gi|429408669|gb|EKZ44904.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec11-9450]
gi|429413105|gb|EKZ49294.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec11-4987]
gi|429415834|gb|EKZ51992.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec11-4984]
gi|429419515|gb|EKZ55650.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec11-4986]
gi|429430994|gb|EKZ67044.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec11-4988]
gi|429435030|gb|EKZ71050.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec11-5603]
gi|429437256|gb|EKZ73263.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec11-6006]
gi|429442373|gb|EKZ78330.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec11-5604]
gi|429446523|gb|EKZ82451.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec12-0465]
gi|429450728|gb|EKZ86621.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec11-9941]
gi|429456201|gb|EKZ92047.1| DNA mismatch repair protein mutS [Escherichia coli O104:H4 str.
Ec12-0466]
gi|431295639|gb|ELF85376.1| DNA mismatch repair protein mutS [Escherichia coli KTE29]
gi|431309084|gb|ELF97361.1| DNA mismatch repair protein mutS [Escherichia coli KTE48]
gi|431469265|gb|ELH49195.1| DNA mismatch repair protein mutS [Escherichia coli KTE203]
gi|431645196|gb|ELJ12846.1| DNA mismatch repair protein mutS [Escherichia coli KTE163]
gi|431655152|gb|ELJ22192.1| DNA mismatch repair protein mutS [Escherichia coli KTE166]
gi|443423268|gb|AGC88172.1| DNA mismatch repair protein MutS [Escherichia coli APEC O78]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|88191725|pdb|1WB9|A Chain A, Crystal Structure Of E. Coli Dna Mismatch Repair Enzyme
Muts, E38t Mutant, In Complex With A G.T Mismatch
gi|88191726|pdb|1WB9|B Chain B, Crystal Structure Of E. Coli Dna Mismatch Repair Enzyme
Muts, E38t Mutant, In Complex With A G.T Mismatch
Length = 800
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T ++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAGLQPVLRQVGDLERIL 352
>gi|417150861|ref|ZP_11990600.1| DNA mismatch repair protein MutS [Escherichia coli 1.2264]
gi|386160355|gb|EIH22166.1| DNA mismatch repair protein MutS [Escherichia coli 1.2264]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|417086177|ref|ZP_11953413.1| DNA mismatch repair protein MutS [Escherichia coli cloneA_i1]
gi|355350702|gb|EHF99898.1| DNA mismatch repair protein MutS [Escherichia coli cloneA_i1]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|387508087|ref|YP_006160343.1| DNA mismatch repair protein MutS [Escherichia coli O55:H7 str.
RM12579]
gi|419127310|ref|ZP_13672188.1| DNA mismatch repair protein MutS [Escherichia coli DEC5C]
gi|209761774|gb|ACI79199.1| MutS protein [Escherichia coli]
gi|374360081|gb|AEZ41788.1| DNA mismatch repair protein MutS [Escherichia coli O55:H7 str.
RM12579]
gi|377973029|gb|EHV36373.1| DNA mismatch repair protein MutS [Escherichia coli DEC5C]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|168762865|ref|ZP_02787872.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC4501]
gi|217327138|ref|ZP_03443221.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
TW14588]
gi|189366846|gb|EDU85262.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
EC4501]
gi|217319505|gb|EEC27930.1| DNA mismatch repair protein MutS [Escherichia coli O157:H7 str.
TW14588]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|217972428|ref|YP_002357179.1| DNA mismatch repair protein MutS [Shewanella baltica OS223]
gi|254766636|sp|B8E8U0.1|MUTS_SHEB2 RecName: Full=DNA mismatch repair protein MutS
gi|217497563|gb|ACK45756.1| DNA mismatch repair protein MutS [Shewanella baltica OS223]
Length = 856
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ GC VPAD + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL
Sbjct: 635 TLMAHIGCFVPADCALIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATASSLV 694
Query: 152 LVDEL 156
L+DE+
Sbjct: 695 LMDEI 699
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N + TL LD+ T G RML+ + +PL + IK RQ A
Sbjct: 270 VLDAATRRNLELTQNLAGGRDNTLAAVLDNTATPMGSRMLQRWIHQPLRDPKHIKARQQA 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
++ LLD E + ++K L D+ER++
Sbjct: 330 VTELLDTA-AHEGLHEQLKALGDIERIM 356
>gi|52698234|gb|AAU86854.1| DNA mismatch repair protein [Shigella boydii]
Length = 193
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 68 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 127
Query: 153 VDEL 156
+DE+
Sbjct: 128 MDEI 131
>gi|52698254|gb|AAU86864.1| DNA mismatch repair protein [Shigella dysenteriae]
Length = 197
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+
Sbjct: 72 MAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLM 131
Query: 154 DEL 156
DE+
Sbjct: 132 DEI 134
>gi|52698242|gb|AAU86858.1| DNA mismatch repair protein [Shigella boydii]
gi|52698286|gb|AAU86880.1| DNA mismatch repair protein [Escherichia coli]
gi|52698310|gb|AAU86892.1| DNA mismatch repair protein [Escherichia coli]
gi|52855238|gb|AAU88493.1| DNA mismatch repair protein [Escherichia coli]
gi|52855240|gb|AAU88494.1| DNA mismatch repair protein [Escherichia coli]
Length = 195
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+
Sbjct: 70 MAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLM 129
Query: 154 DEL 156
DE+
Sbjct: 130 DEI 132
>gi|52697730|gb|AAU86602.1| DNA mismatch repair protein [Shigella boydii]
Length = 193
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+
Sbjct: 68 MAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLM 127
Query: 154 DEL 156
DE+
Sbjct: 128 DEI 130
>gi|52698220|gb|AAU86847.1| DNA mismatch repair protein [Escherichia coli]
gi|52698238|gb|AAU86856.1| DNA mismatch repair protein [Shigella boydii]
gi|52698244|gb|AAU86859.1| DNA mismatch repair protein [Shigella boydii]
gi|52698294|gb|AAU86884.1| DNA mismatch repair protein [Shigella flexneri 2a]
gi|52698302|gb|AAU86888.1| DNA mismatch repair protein [Escherichia coli]
gi|52698304|gb|AAU86889.1| DNA mismatch repair protein [Escherichia coli]
gi|52698306|gb|AAU86890.1| DNA mismatch repair protein [Escherichia coli]
gi|52855222|gb|AAU88485.1| DNA mismatch repair protein [Escherichia coli]
Length = 193
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 70 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 129
Query: 153 VDEL 156
+DE+
Sbjct: 130 MDEI 133
>gi|52698228|gb|AAU86851.1| DNA mismatch repair protein [Shigella boydii]
Length = 196
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 71 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 130
Query: 153 VDEL 156
+DE+
Sbjct: 131 MDEI 134
>gi|4100661|gb|AAD00921.1| DNA mismatch repair protein [Escherichia coli]
gi|4100663|gb|AAD00922.1| DNA mismatch repair protein [Escherichia coli]
gi|4100665|gb|AAD00923.1| DNA mismatch repair protein [Escherichia coli]
gi|4100667|gb|AAD00924.1| DNA mismatch repair protein [Escherichia coli]
gi|4100669|gb|AAD00925.1| DNA mismatch repair protein [Escherichia coli]
gi|4100671|gb|AAD00926.1| DNA mismatch repair protein [Escherichia coli]
gi|4100673|gb|AAD00927.1| DNA mismatch repair protein [Escherichia coli]
gi|4100675|gb|AAD00928.1| DNA mismatch repair protein [Escherichia coli]
gi|4100677|gb|AAD00929.1| DNA mismatch repair protein [Escherichia coli]
gi|4100679|gb|AAD00930.1| DNA mismatch repair protein [Escherichia coli]
gi|4100681|gb|AAD00931.1| DNA mismatch repair protein [Escherichia coli]
gi|4100683|gb|AAD00932.1| DNA mismatch repair protein [Escherichia coli]
gi|4100685|gb|AAD00933.1| DNA mismatch repair protein [Escherichia coli]
gi|4100687|gb|AAD00934.1| DNA mismatch repair protein [Escherichia coli]
gi|4100689|gb|AAD00935.1| DNA mismatch repair protein [Escherichia coli]
gi|4100691|gb|AAD00936.1| DNA mismatch repair protein [Escherichia coli]
gi|4100693|gb|AAD00937.1| DNA mismatch repair protein [Escherichia coli]
gi|4100695|gb|AAD00938.1| DNA mismatch repair protein [Escherichia coli]
gi|4100697|gb|AAD00939.1| DNA mismatch repair protein [Escherichia coli]
gi|4100699|gb|AAD00940.1| DNA mismatch repair protein [Escherichia coli]
gi|4100701|gb|AAD00941.1| DNA mismatch repair protein [Escherichia coli]
gi|4100703|gb|AAD00942.1| DNA mismatch repair protein [Escherichia coli]
gi|4100705|gb|AAD00943.1| DNA mismatch repair protein [Escherichia coli]
gi|4100707|gb|AAD00944.1| DNA mismatch repair protein [Escherichia coli]
gi|4101548|gb|AAD01197.1| DNA mismatch repair protein [Escherichia coli]
gi|4741366|emb|CAB41882.1| mutS [Escherichia coli]
gi|4741386|emb|CAB41883.1| mutS [Escherichia coli]
gi|4741388|emb|CAB41884.1| mutS [Escherichia coli]
gi|8052210|emb|CAB92348.1| MutS protein [Escherichia coli]
gi|8052212|emb|CAB92349.1| MutS protein [Escherichia coli]
gi|8052214|emb|CAB92350.1| MutS protein [Escherichia coli]
Length = 130
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+
Sbjct: 32 MAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLM 91
Query: 154 DEL 156
DE+
Sbjct: 92 DEI 94
>gi|448712106|ref|ZP_21701649.1| DNA mismatch repair protein MutS [Halobiforma nitratireducens JCM
10879]
gi|445791191|gb|EMA41840.1| DNA mismatch repair protein MutS [Halobiforma nitratireducens JCM
10879]
Length = 920
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 48/71 (67%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
R + LS G VPA S LTPVDRIFTR+GA D+++G +ST++ E+ E TI+R A
Sbjct: 679 RQVAQIVLLSQVGSFVPAKSARLTPVDRIFTRVGASDDIAGGRSTFMVEMDELATILREA 738
Query: 146 SKYSLALVDEL 156
+ SL L+DE+
Sbjct: 739 DERSLVLLDEV 749
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 28/90 (31%), Positives = 48/90 (53%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTNS--DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQ 58
+LD+ AL +L + + + TL+ LD ++ G R LR L +PL D I+ R
Sbjct: 310 LLDAVALRSLELFEPRAVHSRDDATLVGVLDETASALGGRKLRDWLRRPLLEPDRIEARL 369
Query: 59 DAISVLLDQKHITEQMRAKMKDLRDLERML 88
DA+ L E+++ ++D+ DLER++
Sbjct: 370 DAVEELNGSVRAREKLQELLRDVYDLERLI 399
>gi|433049113|ref|ZP_20236456.1| DNA mismatch repair protein mutS [Escherichia coli KTE120]
gi|431563425|gb|ELI36637.1| DNA mismatch repair protein mutS [Escherichia coli KTE120]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T ++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAGLQPVLRQVGDLERIL 352
>gi|417683567|ref|ZP_12332914.1| DNA mismatch repair protein MutS [Shigella boydii 3594-74]
gi|420327005|ref|ZP_14828752.1| DNA mismatch repair protein MutS [Shigella flexneri CCH060]
gi|420381832|ref|ZP_14881272.1| DNA mismatch repair protein MutS [Shigella dysenteriae 225-75]
gi|332092095|gb|EGI97173.1| DNA mismatch repair protein MutS [Shigella boydii 3594-74]
gi|391249183|gb|EIQ08420.1| DNA mismatch repair protein MutS [Shigella flexneri CCH060]
gi|391299339|gb|EIQ57303.1| DNA mismatch repair protein MutS [Shigella dysenteriae 225-75]
Length = 841
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 620 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 679
Query: 153 VDEL 156
+DE+
Sbjct: 680 MDEI 683
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 256 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T ++ ++ + DLER+L
Sbjct: 316 IGALQD---FTAGLQPVLRQVGDLERIL 340
>gi|414577485|ref|ZP_11434661.1| DNA mismatch repair protein MutS [Shigella sonnei 3233-85]
gi|415847060|ref|ZP_11525799.1| DNA mismatch repair protein MutS [Shigella sonnei 53G]
gi|417598021|ref|ZP_12248655.1| DNA mismatch repair protein MutS [Escherichia coli 3030-1]
gi|420364625|ref|ZP_14865501.1| DNA mismatch repair protein MutS [Shigella sonnei 4822-66]
gi|323167091|gb|EFZ52809.1| DNA mismatch repair protein MutS [Shigella sonnei 53G]
gi|345351841|gb|EGW84093.1| DNA mismatch repair protein MutS [Escherichia coli 3030-1]
gi|391283557|gb|EIQ42176.1| DNA mismatch repair protein MutS [Shigella sonnei 3233-85]
gi|391293267|gb|EIQ51556.1| DNA mismatch repair protein MutS [Shigella sonnei 4822-66]
Length = 841
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 620 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 679
Query: 153 VDEL 156
+DE+
Sbjct: 680 MDEI 683
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 256 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 316 IGALQD---FTAELQPVLRQVGDLERIL 340
>gi|312973056|ref|ZP_07787229.1| DNA mismatch repair protein MutS [Escherichia coli 1827-70]
gi|417292527|ref|ZP_12079808.1| DNA mismatch repair protein MutS [Escherichia coli B41]
gi|417614180|ref|ZP_12264637.1| DNA mismatch repair protein MutS [Escherichia coli STEC_EH250]
gi|418304275|ref|ZP_12916069.1| DNA mismatch repair protein MutS [Escherichia coli UMNF18]
gi|418956898|ref|ZP_13508823.1| DNA mismatch repair protein MutS [Escherichia coli J53]
gi|425284427|ref|ZP_18675460.1| DNA mismatch repair protein MutS [Escherichia coli TW00353]
gi|310332998|gb|EFQ00212.1| DNA mismatch repair protein MutS [Escherichia coli 1827-70]
gi|339416373|gb|AEJ58045.1| DNA mismatch repair protein MutS [Escherichia coli UMNF18]
gi|345361214|gb|EGW93375.1| DNA mismatch repair protein MutS [Escherichia coli STEC_EH250]
gi|384380692|gb|EIE38558.1| DNA mismatch repair protein MutS [Escherichia coli J53]
gi|386254849|gb|EIJ04539.1| DNA mismatch repair protein MutS [Escherichia coli B41]
gi|408201059|gb|EKI26232.1| DNA mismatch repair protein MutS [Escherichia coli TW00353]
Length = 841
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 620 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 679
Query: 153 VDEL 156
+DE+
Sbjct: 680 MDEI 683
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 256 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T ++ ++ + DLER+L
Sbjct: 316 IGALQD---FTAGLQPVLRQVGDLERIL 340
>gi|13241476|gb|AAK16331.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241480|gb|AAK16333.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241482|gb|AAK16334.1| DNA mismatch repair protein MutS [Escherichia coli ETEC H10407]
gi|13241486|gb|AAK16336.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241488|gb|AAK16337.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241492|gb|AAK16339.1| DNA mismatch repair protein MutS [Escherichia coli]
Length = 126
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+
Sbjct: 30 MAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLM 89
Query: 154 DEL 156
DE+
Sbjct: 90 DEI 92
>gi|73540813|ref|YP_295333.1| DNA mismatch repair protein MutS [Ralstonia eutropha JMP134]
gi|72118226|gb|AAZ60489.1| DNA mismatch repair protein MutS [Ralstonia eutropha JMP134]
Length = 922
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPA + PVDRIFTR+GA D+L+G +ST++ E+TE+ I+ HA+ SL
Sbjct: 674 VLLACVGAYVPARRAVIGPVDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHHATPASLV 733
Query: 152 LVDEL 156
L+DE+
Sbjct: 734 LMDEI 738
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LDS NL + TL LD C T+ G R LR L PL + + RQ AI
Sbjct: 307 LDSATRRNLELTETLRGGESPTLFSLLDTCATAMGSRALRHWLHHPLRDPALPRARQQAI 366
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
VL+D H + +R+ ++ L D+ER+
Sbjct: 367 GVLID--HGIDDLRSALRKLADVERI 390
>gi|28948844|pdb|1NG9|A Chain A, E.Coli Muts R697a: An Atpase-Asymmetry Mutant
gi|28948845|pdb|1NG9|B Chain B, E.Coli Muts R697a: An Atpase-Asymmetry Mutant
Length = 800
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T ++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAGLQPVLRQVGDLERIL 352
>gi|425306473|ref|ZP_18696168.1| DNA mismatch repair protein MutS [Escherichia coli N1]
gi|408227266|gb|EKI50863.1| DNA mismatch repair protein MutS [Escherichia coli N1]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|424533653|ref|ZP_17977002.1| DNA mismatch repair protein MutS [Escherichia coli EC4422]
gi|425157408|ref|ZP_18556672.1| DNA mismatch repair protein MutS [Escherichia coli PA34]
gi|429027877|ref|ZP_19093881.1| DNA mismatch repair protein MutS [Escherichia coli 96.0427]
gi|390860273|gb|EIP22595.1| DNA mismatch repair protein MutS [Escherichia coli EC4422]
gi|408068836|gb|EKH03250.1| DNA mismatch repair protein MutS [Escherichia coli PA34]
gi|427278155|gb|EKW42645.1| DNA mismatch repair protein MutS [Escherichia coli 96.0427]
Length = 821
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 600 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 659
Query: 153 VDEL 156
+DE+
Sbjct: 660 MDEI 663
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 236 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 295
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 296 IGALQD---FTAELQPVLRQVGDLERIL 320
>gi|417272850|ref|ZP_12060199.1| DNA mismatch repair protein MutS [Escherichia coli 2.4168]
gi|432661930|ref|ZP_19897569.1| DNA mismatch repair protein mutS [Escherichia coli KTE111]
gi|386236550|gb|EII68526.1| DNA mismatch repair protein MutS [Escherichia coli 2.4168]
gi|431198553|gb|ELE97375.1| DNA mismatch repair protein mutS [Escherichia coli KTE111]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T ++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAGLQPVLRQVGDLERIL 352
>gi|331684348|ref|ZP_08384940.1| DNA mismatch repair protein MutS [Escherichia coli H299]
gi|450191835|ref|ZP_21891383.1| DNA mismatch repair protein MutS [Escherichia coli SEPT362]
gi|331077963|gb|EGI49169.1| DNA mismatch repair protein MutS [Escherichia coli H299]
gi|449319082|gb|EMD09138.1| DNA mismatch repair protein MutS [Escherichia coli SEPT362]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|229845541|ref|ZP_04465669.1| DNA mismatch repair protein [Haemophilus influenzae 6P18H1]
gi|229811557|gb|EEP47258.1| DNA mismatch repair protein [Haemophilus influenzae 6P18H1]
Length = 861
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPAD+ + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 633 TLLAYIGSFVPADNARIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEQSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LIDEI 697
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/87 (32%), Positives = 52/87 (59%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ +++ +KQRQ I
Sbjct: 269 LDAATRRNLELTQNLSGGTENTLASVLDKCVTPMGSRLLKRWIHQPIRDVEKLKQRQQTI 328
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + ++++ ++ + D+ER+L
Sbjct: 329 TEILN-FDLVDELQPYLQLVGDMERIL 354
>gi|52698284|gb|AAU86879.1| DNA mismatch repair protein [Escherichia coli]
gi|52855242|gb|AAU88495.1| DNA mismatch repair protein [Escherichia coli]
gi|52855244|gb|AAU88496.1| DNA mismatch repair protein [Escherichia coli]
Length = 190
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 67 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 126
Query: 153 VDEL 156
+DE+
Sbjct: 127 MDEI 130
>gi|52698212|gb|AAU86843.1| DNA mismatch repair protein [Escherichia coli]
gi|52698274|gb|AAU86874.1| DNA mismatch repair protein [Escherichia coli]
gi|52698282|gb|AAU86878.1| DNA mismatch repair protein [Escherichia coli]
gi|52855224|gb|AAU88486.1| DNA mismatch repair protein [Escherichia coli]
gi|52855230|gb|AAU88489.1| DNA mismatch repair protein [Escherichia coli]
Length = 195
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 70 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 129
Query: 153 VDEL 156
+DE+
Sbjct: 130 MDEI 133
>gi|52698268|gb|AAU86871.1| DNA mismatch repair protein [Escherichia coli]
gi|52698272|gb|AAU86873.1| DNA mismatch repair protein [Escherichia coli]
gi|52698292|gb|AAU86883.1| DNA mismatch repair protein [Escherichia coli]
gi|52855226|gb|AAU88487.1| DNA mismatch repair protein [Escherichia coli]
gi|52855228|gb|AAU88488.1| DNA mismatch repair protein [Escherichia coli]
gi|52855232|gb|AAU88490.1| DNA mismatch repair protein [Escherichia coli]
Length = 196
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+
Sbjct: 71 MAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLM 130
Query: 154 DEL 156
DE+
Sbjct: 131 DEI 133
>gi|16130640|ref|NP_417213.1| methyl-directed mismatch repair protein [Escherichia coli str. K-12
substr. MG1655]
gi|157162181|ref|YP_001459499.1| DNA mismatch repair protein MutS [Escherichia coli HS]
gi|170019021|ref|YP_001723975.1| DNA mismatch repair protein MutS [Escherichia coli ATCC 8739]
gi|170082309|ref|YP_001731629.1| DNA mismatch repair protein MutS [Escherichia coli str. K-12
substr. DH10B]
gi|194438950|ref|ZP_03071034.1| DNA mismatch repair protein MutS [Escherichia coli 101-1]
gi|238901870|ref|YP_002927666.1| DNA mismatch repair protein MutS [Escherichia coli BW2952]
gi|251786016|ref|YP_003000320.1| mutS, subunit of MutHLS complex, methyl-directed mismatch repair
[Escherichia coli BL21(DE3)]
gi|253772411|ref|YP_003035242.1| DNA mismatch repair protein MutS [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|254162664|ref|YP_003045772.1| DNA mismatch repair protein MutS [Escherichia coli B str. REL606]
gi|254289425|ref|YP_003055173.1| DNA mismatch repair protein [Escherichia coli BL21(DE3)]
gi|300930592|ref|ZP_07145984.1| DNA mismatch repair protein MutS [Escherichia coli MS 187-1]
gi|300954976|ref|ZP_07167387.1| DNA mismatch repair protein MutS [Escherichia coli MS 175-1]
gi|301027344|ref|ZP_07190685.1| DNA mismatch repair protein MutS [Escherichia coli MS 196-1]
gi|331643419|ref|ZP_08344550.1| DNA mismatch repair protein MutS [Escherichia coli H736]
gi|386281779|ref|ZP_10059438.1| DNA mismatch repair protein mutS [Escherichia sp. 4_1_40B]
gi|386594527|ref|YP_006090927.1| DNA mismatch repair protein MutS [Escherichia coli DH1]
gi|386705998|ref|YP_006169845.1| DNA mismatch repair protein mutS [Escherichia coli P12b]
gi|387622416|ref|YP_006130044.1| DNA mismatch repair protein MutS [Escherichia coli DH1]
gi|388478750|ref|YP_490942.1| methyl-directed mismatch repair protein [Escherichia coli str. K-12
substr. W3110]
gi|415779106|ref|ZP_11489878.1| DNA mismatch repair protein MutS [Escherichia coli 3431]
gi|417262599|ref|ZP_12050073.1| DNA mismatch repair protein MutS [Escherichia coli 2.3916]
gi|417277228|ref|ZP_12064553.1| DNA mismatch repair protein MutS [Escherichia coli 3.2303]
gi|417619310|ref|ZP_12269723.1| DNA mismatch repair protein MutS [Escherichia coli G58-1]
gi|417635742|ref|ZP_12285953.1| DNA mismatch repair protein MutS [Escherichia coli STEC_S1191]
gi|417944109|ref|ZP_12587354.1| DNA mismatch repair protein MutS [Escherichia coli XH140A]
gi|417975569|ref|ZP_12616367.1| DNA mismatch repair protein MutS [Escherichia coli XH001]
gi|419143664|ref|ZP_13688398.1| DNA mismatch repair protein MutS [Escherichia coli DEC6A]
gi|419149545|ref|ZP_13694197.1| DNA mismatch repair protein MutS [Escherichia coli DEC6B]
gi|419155146|ref|ZP_13699706.1| DNA mismatch repair protein MutS [Escherichia coli DEC6C]
gi|419160445|ref|ZP_13704947.1| DNA mismatch repair protein MutS [Escherichia coli DEC6D]
gi|419165501|ref|ZP_13709955.1| DNA mismatch repair protein MutS [Escherichia coli DEC6E]
gi|419176404|ref|ZP_13720218.1| DNA mismatch repair protein MutS [Escherichia coli DEC7B]
gi|419812853|ref|ZP_14337714.1| DNA mismatch repair protein MutS [Escherichia coli O32:H37 str. P4]
gi|419939799|ref|ZP_14456584.1| DNA mismatch repair protein MutS [Escherichia coli 75]
gi|422771403|ref|ZP_16825093.1| DNA mismatch repair protein MutS [Escherichia coli E482]
gi|422787742|ref|ZP_16840480.1| DNA mismatch repair protein MutS [Escherichia coli H489]
gi|422791961|ref|ZP_16844663.1| DNA mismatch repair protein MutS [Escherichia coli TA007]
gi|422817852|ref|ZP_16866065.1| DNA mismatch repair protein mutS [Escherichia coli M919]
gi|423703931|ref|ZP_17678356.1| DNA mismatch repair protein mutS [Escherichia coli H730]
gi|425273898|ref|ZP_18665304.1| DNA mismatch repair protein MutS [Escherichia coli TW15901]
gi|432564988|ref|ZP_19801564.1| DNA mismatch repair protein mutS [Escherichia coli KTE51]
gi|432628363|ref|ZP_19864336.1| DNA mismatch repair protein mutS [Escherichia coli KTE77]
gi|432637945|ref|ZP_19873812.1| DNA mismatch repair protein mutS [Escherichia coli KTE81]
gi|432686540|ref|ZP_19921833.1| DNA mismatch repair protein mutS [Escherichia coli KTE156]
gi|432687932|ref|ZP_19923212.1| DNA mismatch repair protein mutS [Escherichia coli KTE161]
gi|432705486|ref|ZP_19940584.1| DNA mismatch repair protein mutS [Escherichia coli KTE171]
gi|432738184|ref|ZP_19972939.1| DNA mismatch repair protein mutS [Escherichia coli KTE42]
gi|432876586|ref|ZP_20094504.1| DNA mismatch repair protein mutS [Escherichia coli KTE154]
gi|432956359|ref|ZP_20148086.1| DNA mismatch repair protein mutS [Escherichia coli KTE197]
gi|442595128|ref|ZP_21012992.1| DNA mismatch repair protein MutS [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|442598395|ref|ZP_21016163.1| DNA mismatch repair protein MutS [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
gi|450247508|ref|ZP_21901209.1| DNA mismatch repair protein MutS [Escherichia coli S17]
gi|127556|sp|P23909.1|MUTS_ECOLI RecName: Full=DNA mismatch repair protein MutS
gi|167012382|sp|A8A3L2.1|MUTS_ECOHS RecName: Full=DNA mismatch repair protein MutS
gi|189030717|sp|B1IUU6.1|MUTS_ECOLC RecName: Full=DNA mismatch repair protein MutS
gi|229486460|sp|B1XCR0.1|MUTS_ECODH RecName: Full=DNA mismatch repair protein MutS
gi|259511165|sp|C4ZZN7.1|MUTS_ECOBW RecName: Full=DNA mismatch repair protein MutS
gi|146906|gb|AAA24188.1| DNA mismatch repair protein [Escherichia coli]
gi|882626|gb|AAA69243.1| DNA mismatch repair protein [Escherichia coli str. K-12 substr.
MG1655]
gi|1789089|gb|AAC75775.1| methyl-directed mismatch repair protein [Escherichia coli str. K-12
substr. MG1655]
gi|85675554|dbj|BAE76810.1| methyl-directed mismatch repair protein [Escherichia coli str. K12
substr. W3110]
gi|157067861|gb|ABV07116.1| DNA mismatch repair protein MutS [Escherichia coli HS]
gi|169753949|gb|ACA76648.1| DNA mismatch repair protein MutS [Escherichia coli ATCC 8739]
gi|169890144|gb|ACB03851.1| methyl-directed mismatch repair protein [Escherichia coli str. K-12
substr. DH10B]
gi|194422071|gb|EDX38074.1| DNA mismatch repair protein MutS [Escherichia coli 101-1]
gi|238861765|gb|ACR63763.1| methyl-directed mismatch repair protein [Escherichia coli BW2952]
gi|242378289|emb|CAQ33065.1| mutS, subunit of MutHLS complex, methyl-directed mismatch repair
[Escherichia coli BL21(DE3)]
gi|253323455|gb|ACT28057.1| DNA mismatch repair protein MutS [Escherichia coli
'BL21-Gold(DE3)pLysS AG']
gi|253974565|gb|ACT40236.1| DNA mismatch repair protein [Escherichia coli B str. REL606]
gi|253978732|gb|ACT44402.1| DNA mismatch repair protein [Escherichia coli BL21(DE3)]
gi|260448216|gb|ACX38638.1| DNA mismatch repair protein MutS [Escherichia coli DH1]
gi|299879337|gb|EFI87548.1| DNA mismatch repair protein MutS [Escherichia coli MS 196-1]
gi|300318068|gb|EFJ67852.1| DNA mismatch repair protein MutS [Escherichia coli MS 175-1]
gi|300461534|gb|EFK25027.1| DNA mismatch repair protein MutS [Escherichia coli MS 187-1]
gi|315137340|dbj|BAJ44499.1| DNA mismatch repair protein MutS [Escherichia coli DH1]
gi|315615122|gb|EFU95759.1| DNA mismatch repair protein MutS [Escherichia coli 3431]
gi|323941436|gb|EGB37619.1| DNA mismatch repair protein MutS [Escherichia coli E482]
gi|323960607|gb|EGB56233.1| DNA mismatch repair protein MutS [Escherichia coli H489]
gi|323971538|gb|EGB66771.1| DNA mismatch repair protein MutS [Escherichia coli TA007]
gi|331036890|gb|EGI09114.1| DNA mismatch repair protein MutS [Escherichia coli H736]
gi|342364243|gb|EGU28345.1| DNA mismatch repair protein MutS [Escherichia coli XH140A]
gi|344194730|gb|EGV48802.1| DNA mismatch repair protein MutS [Escherichia coli XH001]
gi|345374623|gb|EGX06574.1| DNA mismatch repair protein MutS [Escherichia coli G58-1]
gi|345386612|gb|EGX16445.1| DNA mismatch repair protein MutS [Escherichia coli STEC_S1191]
gi|359332990|dbj|BAL39437.1| methyl-directed mismatch repair protein [Escherichia coli str. K-12
substr. MDS42]
gi|377991197|gb|EHV54348.1| DNA mismatch repair protein MutS [Escherichia coli DEC6B]
gi|377992679|gb|EHV55824.1| DNA mismatch repair protein MutS [Escherichia coli DEC6A]
gi|377995664|gb|EHV58780.1| DNA mismatch repair protein MutS [Escherichia coli DEC6C]
gi|378006414|gb|EHV69398.1| DNA mismatch repair protein MutS [Escherichia coli DEC6D]
gi|378008430|gb|EHV71389.1| DNA mismatch repair protein MutS [Escherichia coli DEC6E]
gi|378031610|gb|EHV94197.1| DNA mismatch repair protein MutS [Escherichia coli DEC7B]
gi|383104166|gb|AFG41675.1| DNA mismatch repair protein mutS [Escherichia coli P12b]
gi|385154268|gb|EIF16283.1| DNA mismatch repair protein MutS [Escherichia coli O32:H37 str. P4]
gi|385538365|gb|EIF85227.1| DNA mismatch repair protein mutS [Escherichia coli M919]
gi|385707047|gb|EIG44079.1| DNA mismatch repair protein mutS [Escherichia coli H730]
gi|386120970|gb|EIG69588.1| DNA mismatch repair protein mutS [Escherichia sp. 4_1_40B]
gi|386224045|gb|EII46394.1| DNA mismatch repair protein MutS [Escherichia coli 2.3916]
gi|386240102|gb|EII77027.1| DNA mismatch repair protein MutS [Escherichia coli 3.2303]
gi|388406523|gb|EIL66926.1| DNA mismatch repair protein MutS [Escherichia coli 75]
gi|408192139|gb|EKI17723.1| DNA mismatch repair protein MutS [Escherichia coli TW15901]
gi|431092236|gb|ELD97940.1| DNA mismatch repair protein mutS [Escherichia coli KTE51]
gi|431162140|gb|ELE62598.1| DNA mismatch repair protein mutS [Escherichia coli KTE77]
gi|431169360|gb|ELE69579.1| DNA mismatch repair protein mutS [Escherichia coli KTE81]
gi|431220514|gb|ELF17847.1| DNA mismatch repair protein mutS [Escherichia coli KTE156]
gi|431237984|gb|ELF32930.1| DNA mismatch repair protein mutS [Escherichia coli KTE161]
gi|431242024|gb|ELF36451.1| DNA mismatch repair protein mutS [Escherichia coli KTE171]
gi|431281028|gb|ELF71936.1| DNA mismatch repair protein mutS [Escherichia coli KTE42]
gi|431419627|gb|ELH01976.1| DNA mismatch repair protein mutS [Escherichia coli KTE154]
gi|431466532|gb|ELH46552.1| DNA mismatch repair protein mutS [Escherichia coli KTE197]
gi|441604913|emb|CCP98142.1| DNA mismatch repair protein MutS [Escherichia coli O10:K5(L):H4
str. ATCC 23506]
gi|441652905|emb|CCQ01762.1| DNA mismatch repair protein MutS [Escherichia coli O5:K4(L):H4 str.
ATCC 23502]
gi|449318307|gb|EMD08381.1| DNA mismatch repair protein MutS [Escherichia coli S17]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T ++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAGLQPVLRQVGDLERIL 352
>gi|425116262|ref|ZP_18518055.1| DNA mismatch repair protein MutS [Escherichia coli 8.0566]
gi|425121022|ref|ZP_18522711.1| DNA mismatch repair protein MutS [Escherichia coli 8.0569]
gi|408566255|gb|EKK42329.1| DNA mismatch repair protein MutS [Escherichia coli 8.0566]
gi|408567574|gb|EKK43629.1| DNA mismatch repair protein MutS [Escherichia coli 8.0569]
Length = 841
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 620 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 679
Query: 153 VDEL 156
+DE+
Sbjct: 680 MDEI 683
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 256 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T ++ ++ + DLER+L
Sbjct: 316 IGALQD---FTAGLQPVLRQVGDLERIL 340
>gi|425301570|ref|ZP_18691455.1| DNA mismatch repair protein MutS [Escherichia coli 07798]
gi|432802918|ref|ZP_20036874.1| DNA mismatch repair protein mutS [Escherichia coli KTE84]
gi|408212096|gb|EKI36629.1| DNA mismatch repair protein MutS [Escherichia coli 07798]
gi|431347447|gb|ELG34335.1| DNA mismatch repair protein mutS [Escherichia coli KTE84]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|416340143|ref|ZP_11675158.1| DNA mismatch repair protein MutS [Escherichia coli EC4100B]
gi|320202380|gb|EFW76950.1| DNA mismatch repair protein MutS [Escherichia coli EC4100B]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 47.0 bits (110), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNMAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|52855216|gb|AAU88482.1| DNA mismatch repair protein [Escherichia coli]
Length = 186
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+
Sbjct: 72 MAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLM 131
Query: 154 DEL 156
DE+
Sbjct: 132 DEI 134
>gi|52697744|gb|AAU86609.1| DNA mismatch repair protein [Shigella boydii]
gi|52698256|gb|AAU86865.1| DNA mismatch repair protein [Shigella dysenteriae]
gi|52698266|gb|AAU86870.1| DNA mismatch repair protein [Escherichia coli]
gi|52855248|gb|AAU88498.1| DNA mismatch repair protein [Escherichia coli]
Length = 189
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 66 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 125
Query: 153 VDEL 156
+DE+
Sbjct: 126 MDEI 129
>gi|52698214|gb|AAU86844.1| DNA mismatch repair protein [Escherichia coli]
gi|52698240|gb|AAU86857.1| DNA mismatch repair protein [Shigella sonnei]
gi|52698250|gb|AAU86862.1| DNA mismatch repair protein [Shigella dysenteriae]
Length = 194
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 71 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 130
Query: 153 VDEL 156
+DE+
Sbjct: 131 MDEI 134
>gi|88191733|pdb|1WBD|A Chain A, Crystal Structure Of E. Coli Dna Mismatch Repair Enzyme
Muts, E38q Mutant, In Complex With A G.T Mismatch
gi|88191734|pdb|1WBD|B Chain B, Crystal Structure Of E. Coli Dna Mismatch Repair Enzyme
Muts, E38q Mutant, In Complex With A G.T Mismatch
Length = 800
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T ++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAGLQPVLRQVGDLERIL 352
>gi|88191729|pdb|1WBB|A Chain A, Crystal Structure Of E. Coli Dna Mismatch Repair Enzyme
Muts, E38a Mutant, In Complex With A G.T Mismatch
gi|88191730|pdb|1WBB|B Chain B, Crystal Structure Of E. Coli Dna Mismatch Repair Enzyme
Muts, E38a Mutant, In Complex With A G.T Mismatch
Length = 800
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T ++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAGLQPVLRQVGDLERIL 352
>gi|52698300|gb|AAU86887.1| DNA mismatch repair protein [Shigella flexneri]
Length = 193
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 70 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 129
Query: 153 VDEL 156
+DE+
Sbjct: 130 MDEI 133
>gi|34810696|pdb|1OH5|A Chain A, The Crystal Structure Of E. Coli Muts Binding To Dna With
A C:a Mismatch
gi|34810697|pdb|1OH5|B Chain B, The Crystal Structure Of E. Coli Muts Binding To Dna With
A C:a Mismatch
gi|34810700|pdb|1OH6|A Chain A, The Crystal Structure Of E. Coli Muts Binding To Dna With
An A:a Mismatch
gi|34810701|pdb|1OH6|B Chain B, The Crystal Structure Of E. Coli Muts Binding To Dna With
An A:a Mismatch
gi|34810704|pdb|1OH7|A Chain A, The Crystal Structure Of E. Coli Muts Binding To Dna With
A G:g Mismatch
gi|34810705|pdb|1OH7|B Chain B, The Crystal Structure Of E. Coli Muts Binding To Dna With
A G:g Mismatch
gi|34810708|pdb|1OH8|A Chain A, The Crystal Structure Of E. Coli Muts Binding To Dna With
An Unpaired Thymidine
gi|34810709|pdb|1OH8|B Chain B, The Crystal Structure Of E. Coli Muts Binding To Dna With
An Unpaired Thymidine
gi|55670651|pdb|1W7A|A Chain A, Atp Bound Muts
gi|55670652|pdb|1W7A|B Chain B, Atp Bound Muts
gi|288562822|pdb|2WTU|A Chain A, Crystal Structure Of Escherichia Coli Muts In Complex With
A 16 Basepair Oligo Containing An A.A Mismatch.
gi|288562823|pdb|2WTU|B Chain B, Crystal Structure Of Escherichia Coli Muts In Complex With
A 16 Basepair Oligo Containing An A.A Mismatch
Length = 800
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T ++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAGLQPVLRQVGDLERIL 352
>gi|52698262|gb|AAU86868.1| DNA mismatch repair protein [Shigella dysenteriae]
Length = 194
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 71 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 130
Query: 153 VDEL 156
+DE+
Sbjct: 131 MDEI 134
>gi|52698230|gb|AAU86852.1| DNA mismatch repair protein [Shigella sonnei]
gi|52698308|gb|AAU86891.1| DNA mismatch repair protein [Escherichia coli]
Length = 191
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 68 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 127
Query: 153 VDEL 156
+DE+
Sbjct: 128 MDEI 131
>gi|52698232|gb|AAU86853.1| DNA mismatch repair protein [Shigella sonnei]
Length = 191
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 69 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 128
Query: 153 VDEL 156
+DE+
Sbjct: 129 MDEI 132
>gi|17017340|gb|AAL33627.1|AF440200_1 MutS [Escherichia coli]
Length = 819
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 631 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 690
Query: 153 VDEL 156
+DE+
Sbjct: 691 MDEI 694
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 267 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 326
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T ++ ++ + DLER+L
Sbjct: 327 IGALQD---FTAGLQPVLRQVGDLERIL 351
>gi|420337874|ref|ZP_14839436.1| DNA mismatch repair protein MutS [Shigella flexneri K-315]
gi|391259748|gb|EIQ18822.1| DNA mismatch repair protein MutS [Shigella flexneri K-315]
Length = 841
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 620 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 679
Query: 153 VDEL 156
+DE+
Sbjct: 680 MDEI 683
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 256 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T ++ ++ + DLER+L
Sbjct: 316 IGALQD---FTAGLQPVLRQVGDLERIL 340
>gi|90109855|sp|Q473E4.2|MUTS_CUPPJ RecName: Full=DNA mismatch repair protein MutS
Length = 894
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPA + PVDRIFTR+GA D+L+G +ST++ E+TE+ I+ HA+ SL
Sbjct: 646 VLLACVGAYVPARRAVIGPVDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHHATPASLV 705
Query: 152 LVDEL 156
L+DE+
Sbjct: 706 LMDEI 710
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LDS NL + TL LD C T+ G R LR L PL + + RQ AI
Sbjct: 279 LDSATRRNLELTETLRGGESPTLFSLLDTCATAMGSRALRHWLHHPLRDPALPRARQQAI 338
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
VL+D H + +R+ ++ L D+ER+
Sbjct: 339 GVLID--HGIDDLRSALRKLADVERI 362
>gi|52698222|gb|AAU86848.1| DNA mismatch repair protein [Shigella flexneri]
Length = 193
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+
Sbjct: 67 MAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLM 126
Query: 154 DEL 156
DE+
Sbjct: 127 DEI 129
>gi|384495958|gb|EIE86449.1| hypothetical protein RO3G_11160 [Rhizopus delemar RA 99-880]
Length = 964
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA S LTP DRI+TR+GA DN+ G QST++ ELTE+ I++ A+ S+ ++DEL
Sbjct: 854 GGYVPARSCYLTPCDRIYTRIGANDNIMGGQSTFMVELTETSKILQEATPRSMVILDEL 912
Score = 55.8 bits (133), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD LANL + NS D EGT+ + L + +T FGKR+ + L PL I R D
Sbjct: 482 VLDGQTLANLEIFQNSYDGGIEGTVFKLLANSITPFGKRLFKRWLCHPLRQPKDINDRLD 541
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L+ + + ++ L DLER++
Sbjct: 542 AVEDLMKLWDLHSSVAKQLASLPDLERLM 570
>gi|415802787|ref|ZP_11500147.1| DNA mismatch repair protein MutS, partial [Escherichia coli
E128010]
gi|323159963|gb|EFZ45933.1| DNA mismatch repair protein MutS [Escherichia coli E128010]
Length = 747
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 47/64 (73%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ ST++ E+TE+ I+ +A++YSL L
Sbjct: 526 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGHSTFMVEMTETANILHNATEYSLVL 585
Query: 153 VDEL 156
+DE+
Sbjct: 586 MDEI 589
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 162 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 221
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 222 IGALQD---FTAELQPVLRQVGDLERIL 246
>gi|153001640|ref|YP_001367321.1| DNA mismatch repair protein MutS [Shewanella baltica OS185]
gi|166232135|sp|A6WR19.1|MUTS_SHEB8 RecName: Full=DNA mismatch repair protein MutS
gi|151366258|gb|ABS09258.1| DNA mismatch repair protein MutS [Shewanella baltica OS185]
Length = 856
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ GC VPAD + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL
Sbjct: 635 TLMAHIGCFVPADRALIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATASSLV 694
Query: 152 LVDEL 156
L+DE+
Sbjct: 695 LMDEI 699
Score = 48.5 bits (114), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N + TL LD+ T G RML+ + +PL + IK RQ A
Sbjct: 270 VLDAATRRNLELTQNLAGGRDNTLAAVLDNTATPMGSRMLQRWIHQPLRDPKHIKARQQA 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
++ LLD E + ++K L D+ER++
Sbjct: 330 VTELLDTA-AHEGLHEQLKALGDIERIM 356
>gi|52697746|gb|AAU86610.1| DNA mismatch repair protein [Shigella boydii]
Length = 192
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+
Sbjct: 67 MAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLM 126
Query: 154 DEL 156
DE+
Sbjct: 127 DEI 129
>gi|444518975|gb|ELV12486.1| DNA mismatch repair protein Msh6 [Tupaia chinensis]
Length = 1306
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C TSFGKR+L+ L PL + AI R D
Sbjct: 735 VLDAVTLNNLEIFLNGTNGSTEGTLLERIDTCQTSFGKRLLKQWLCAPLCSPYAINDRLD 794
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ + ++ +K L DLER+L
Sbjct: 795 AIEDLMVVTNKISEVTDLLKKLPDLERLL 823
Score = 43.5 bits (101), Expect = 0.029, Method: Composition-based stats.
Identities = 17/33 (51%), Positives = 23/33 (69%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQST 130
GC VPA+ LTP+DR+FTR+GA D + + T
Sbjct: 1159 GCYVPAEVCRLTPIDRVFTRLGASDRIMSGRGT 1191
>gi|13241522|gb|AAK16354.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241524|gb|AAK16355.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241528|gb|AAK16357.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241532|gb|AAK16359.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241534|gb|AAK16360.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241548|gb|AAK16367.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241604|gb|AAK16395.1| DNA mismatch repair protein MutS [Escherichia coli]
gi|13241606|gb|AAK16396.1| DNA mismatch repair protein MutS [Escherichia coli]
Length = 126
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 29 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETTNILHNATEYSLVL 88
Query: 153 VDEL 156
+DE+
Sbjct: 89 MDEI 92
>gi|13241526|gb|AAK16356.1| DNA mismatch repair protein MutS [Escherichia coli]
Length = 126
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 29 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETTNILHNATEYSLVL 88
Query: 153 VDEL 156
+DE+
Sbjct: 89 MDEI 92
>gi|113460154|ref|YP_718210.1| DNA mismatch repair protein MutS [Haemophilus somnus 129PT]
gi|123131917|sp|Q0I1B8.1|MUTS_HAES1 RecName: Full=DNA mismatch repair protein MutS
gi|112822197|gb|ABI24286.1| DNA mismatch repair protein MutS [Haemophilus somnus 129PT]
Length = 856
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPA+S + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 628 TLMAYIGSFVPAESAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATEQSLV 687
Query: 152 LVDEL 156
L+DE+
Sbjct: 688 LIDEI 692
Score = 57.4 bits (137), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/87 (33%), Positives = 54/87 (62%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D++ NL + N TE TL LD CVT G R+L+ + +P+ N++ ++ RQ I
Sbjct: 266 IDASTRRNLELTQNLAGGTENTLAAILDKCVTPMGSRLLKRWIHQPIRNIEKLQCRQQHI 325
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+LL Q+++ E+++ ++ + D+ER+L
Sbjct: 326 QMLL-QQNLVEELQPLLRQVGDMERIL 351
>gi|448331150|ref|ZP_21520420.1| DNA mismatch repair protein MutS, partial [Natrinema versiforme JCM
10478]
gi|445609976|gb|ELY63761.1| DNA mismatch repair protein MutS, partial [Natrinema versiforme JCM
10478]
Length = 428
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
R + L+ G VPA + LTPVDRIFTR+GA D+++G +ST++ E+ E TI+R A
Sbjct: 187 RQVAQIVLLAQVGSFVPASAARLTPVDRIFTRVGASDDIAGGRSTFMVEMDELATILREA 246
Query: 146 SKYSLALVDEL 156
++SL L+DE+
Sbjct: 247 DEHSLVLLDEV 257
>gi|13241572|gb|AAK16379.1| DNA mismatch repair protein MutS [Escherichia coli]
Length = 126
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 47/64 (73%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P DRIFTR+GA D+L+ +ST++AE+TE+ I+ +A+ YSL L
Sbjct: 29 LMAYIGSYVPAQKVEIGPTDRIFTRVGAADDLASGRSTFMAEMTETANILHNATGYSLVL 88
Query: 153 VDEL 156
+DE+
Sbjct: 89 MDEI 92
>gi|422017063|ref|ZP_16363632.1| DNA mismatch repair protein MutS [Providencia alcalifaciens Dmel2]
gi|414105971|gb|EKT67524.1| DNA mismatch repair protein MutS [Providencia alcalifaciens Dmel2]
Length = 855
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL
Sbjct: 631 TLLAYIGSFVPASKAVIGPVDRIFTRVGASDDLASGRSTFMVEMTETANILHNATEHSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N TE TL LD CVT G RML+ L PL NL + RQ A
Sbjct: 268 ILDAATRRNLELTQNLAGGTENTLAAILDKCVTPMGSRMLKRWLHTPLRNLTVLTNRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q++ E ++ ++ + DLER+L
Sbjct: 328 IGAL--QQYGIE-LQPFLRQIGDLERVL 352
>gi|334186287|ref|NP_001190656.1| DNA mismatch repair protein Msh6-1 [Arabidopsis thaliana]
gi|332656720|gb|AEE82120.1| DNA mismatch repair protein Msh6-1 [Arabidopsis thaliana]
Length = 1321
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 1 ILDSTALANLHVLTNSDNTT-EGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ AL NL + NS N GTL QL+ C+T+ GKR+L+ L +PL N + IK+RQD
Sbjct: 694 VLDAAALENLEIFENSRNGGYSGTLYAQLNQCITASGKRLLKTWLARPLYNTELIKERQD 753
Query: 60 AISVLLDQK-HITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTL 108
A+++L + + + R + L D+ER++ + F S + D + L
Sbjct: 754 AVAILRGENLPYSLEFRKSLSRLPDMERLI-ARMFSSIEASGRNGDKVVL 802
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 84 LERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMR 143
L R + + L+ G VPA++ ++PVD+I RMGAKD++ QST+L EL+E+ ++
Sbjct: 1089 LLRQVCLAVILAQIGADVPAETFEVSPVDKICVRMGAKDHIMAGQSTFLTELSETAVMLT 1148
Query: 144 HASKYSLALVDEL 156
A++ SL ++DEL
Sbjct: 1149 SATRNSLVVLDEL 1161
>gi|114331988|ref|YP_748210.1| DNA mismatch repair protein MutS [Nitrosomonas eutropha C91]
gi|122313305|sp|Q0AEI7.1|MUTS_NITEC RecName: Full=DNA mismatch repair protein MutS
gi|114309002|gb|ABI60245.1| DNA mismatch repair protein MutS [Nitrosomonas eutropha C91]
Length = 880
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L+ G VPA S + P+D+IFTR+GA D+L+G +ST++ E+TE+ +I+R+A+ SL L
Sbjct: 653 LLAHCGSFVPAGSARIGPIDQIFTRIGAADDLAGGRSTFMVEMTEAASILRNATAQSLVL 712
Query: 153 VDEL 156
VDE+
Sbjct: 713 VDEI 716
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL LD C TS G R+LR L PL N ++QR DA+
Sbjct: 282 MDAATRRNLEITLTLRGEEAPTLSSLLDICATSMGSRLLRHWLHHPLRNRITLQQRLDAV 341
Query: 62 SVLLDQKH--ITEQMRAKMKDLRDLERM 87
S L+ K + +R ++K + D+ER+
Sbjct: 342 SDLIGAKPGILYAGIRERLKHIADIERI 369
>gi|322706069|gb|EFY97651.1| DNA mismatch repair protein msh6 [Metarhizium anisopliae ARSEF 23]
Length = 1222
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 1009 GCYVPAVSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1067
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + +N+ N ++EGTL L+ C+T FGKR+ R + PL ++ I +R D
Sbjct: 633 VLDGQTLVNLELFSNTSNGSSEGTLFSLLNKCITPFGKRLFRQWVAHPLCDIQRINERLD 692
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L + EQ +++ + DLER++
Sbjct: 693 AVDMLNADPTVREQFASQLVKMPDLERLI 721
>gi|300113486|ref|YP_003760061.1| DNA mismatch repair protein MutS [Nitrosococcus watsonii C-113]
gi|299539423|gb|ADJ27740.1| DNA mismatch repair protein MutS [Nitrosococcus watsonii C-113]
Length = 863
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ +A++YSL
Sbjct: 637 VLLAHIGSFVPARRAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTETANILHNATQYSLV 696
Query: 152 LVDEL 156
L+DE+
Sbjct: 697 LLDEV 701
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 ILDSTALANLHVLTN-SDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD + NL + + S ++ TLI LD T+ G R+LR L +PL + +KQRQ
Sbjct: 269 ILDPSTRRNLELEESLSGHSNHNTLIAVLDRTATAMGSRLLRRYLHRPLRDQTLLKQRQQ 328
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A++ LL+ +T+ ++ ++ + D+ER+L
Sbjct: 329 ALAALLEGG-LTDILQKLLRGIGDIERIL 356
>gi|15217092|gb|AAK92501.1|AF400584_1 mismatch repair protein [Acinetobacter sp. AD321]
Length = 844
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 609 SLLAYCGSYVPAKAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATHQSLV 668
Query: 152 LVDEL 156
L+DE+
Sbjct: 669 LMDEV 673
>gi|212711362|ref|ZP_03319490.1| hypothetical protein PROVALCAL_02434 [Providencia alcalifaciens DSM
30120]
gi|212686091|gb|EEB45619.1| hypothetical protein PROVALCAL_02434 [Providencia alcalifaciens DSM
30120]
Length = 855
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL
Sbjct: 631 TLLAYIGSFVPASKAVIGPVDRIFTRVGASDDLASGRSTFMVEMTETANILHNATEHSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N TE TL LD CVT G RML+ L PL NL + RQ A
Sbjct: 268 ILDAATRRNLELTQNLAGGTENTLAAILDKCVTPMGSRMLKRWLHTPLRNLTVLTNRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q++ E ++ ++ + DLER+L
Sbjct: 328 IGAL--QQYGIE-LQPFLRQIGDLERVL 352
>gi|365848060|ref|ZP_09388540.1| DNA mismatch repair protein MutS [Yokenella regensburgei ATCC
43003]
gi|364571454|gb|EHM49041.1| DNA mismatch repair protein MutS [Yokenella regensburgei ATCC
43003]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 86/172 (50%), Gaps = 37/172 (21%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
L + ALA L VL N E L++C +F KP + ++ R +
Sbjct: 544 LSAAALAELDVLVNLAERAE-----TLNYCCPTFTD--------KP--GIQIVEGRHPVV 588
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML----PS----STF---------LSFQGCRVPAD 104
+L++ I + +L RML P+ ST+ L++ G VPA
Sbjct: 589 EQVLNEPFIANPL-----NLASQRRMLIITGPNMGGKSTYMRQTALIALLAYIGSYVPAQ 643
Query: 105 SLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
+ + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL L+DE+
Sbjct: 644 KVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEI 695
Score = 43.9 bits (102), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLSGGFENTLAAVLDKTVTPMGSRMLKRWLHMPVRSTQVLVERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I+ L Q +E ++ ++ + DLER+L
Sbjct: 328 IAAL--QPSYSE-LQPVLRQVGDLERIL 352
>gi|299770825|ref|YP_003732851.1| DNA mismatch repair protein MutS [Acinetobacter oleivorans DR1]
gi|298700913|gb|ADI91478.1| DNA mismatch repair protein MutS [Acinetobacter oleivorans DR1]
Length = 879
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPAKTAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYH-ESPVRLVLKEIG 355
Query: 83 DLERML---------PSSTFLSFQGC-RVPADSLTLTPV 111
D+ER+L P C ++PA LTPV
Sbjct: 356 DIERVLSRVALGSARPRDLVQLRHACAQIPALRTALTPV 394
>gi|424741967|ref|ZP_18170302.1| DNA mismatch repair protein MutS [Acinetobacter baumannii WC-141]
gi|422944399|gb|EKU39395.1| DNA mismatch repair protein MutS [Acinetobacter baumannii WC-141]
Length = 879
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPAKAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYH-ESPVRLVLKEIG 355
Query: 83 DLERML---------PSSTFLSFQGC-RVPADSLTLTPV 111
D+ER+L P C ++PA LTPV
Sbjct: 356 DIERVLSRVALGSARPRDLVQLRHACAQIPALRTALTPV 394
>gi|421261907|ref|ZP_15713362.1| DNA mismatch repair protein MutS, partial [Pasteurella multocida
subsp. multocida str. Anand1_cattle]
gi|401691192|gb|EJS86213.1| DNA mismatch repair protein MutS, partial [Pasteurella multocida
subsp. multocida str. Anand1_cattle]
Length = 207
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPA+S + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 70 TLMAYMGSFVPAESAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATANSLV 129
Query: 152 LVDEL 156
L+DE+
Sbjct: 130 LIDEI 134
>gi|260914563|ref|ZP_05921031.1| DNA mismatch repair protein MutS [Pasteurella dagmatis ATCC 43325]
gi|260631354|gb|EEX49537.1| DNA mismatch repair protein MutS [Pasteurella dagmatis ATCC 43325]
Length = 860
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPA+S + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 630 TLMAYMGSFVPAESAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATANSLV 689
Query: 152 LVDEL 156
L+DE+
Sbjct: 690 LIDEI 694
Score = 53.1 bits (126), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT+ G R+L+ + +P+ + + QRQ I
Sbjct: 266 LDAATRRNLELTQNLAGGTENTLSSVLDKCVTAMGSRLLKRWIHQPIRDRRKLLQRQHII 325
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
LL+Q + Q++ + + D+ER+L
Sbjct: 326 GALLEQD-LVAQLQPYLNQIGDMERIL 351
>gi|261345853|ref|ZP_05973497.1| DNA mismatch repair protein MutS [Providencia rustigianii DSM 4541]
gi|282566343|gb|EFB71878.1| DNA mismatch repair protein MutS [Providencia rustigianii DSM 4541]
Length = 855
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL
Sbjct: 631 TLLAYIGSFVPASKAVIGPVDRIFTRVGASDDLASGRSTFMVEMTETANILHNATEHSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 57.0 bits (136), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N TE TL LD CVT G RML+ L PL N+D + RQ A
Sbjct: 268 ILDAATRRNLELTQNLAGGTENTLAAILDLCVTPMGSRMLKRWLHTPLRNIDVLTHRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L + +++ ++ + DLER+L
Sbjct: 328 IGAL---QECGLELQPFLRQIGDLERVL 352
>gi|322699711|gb|EFY91470.1| DNA mismatch repair protein msh6 [Metarhizium acridum CQMa 102]
Length = 1220
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 1007 GCYVPAVSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1065
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + +N+ N ++EGTL L+ C+T FGKR+ R + PL ++ I +R D
Sbjct: 631 VLDGQTLVNLELFSNTSNGSSEGTLFSLLNKCITPFGKRLFRQWVAHPLCDIQRINERLD 690
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L + EQ +++ + DLER++
Sbjct: 691 AVDMLNADPTVREQFASQLVKMPDLERLI 719
>gi|336065263|ref|YP_004560121.1| DNA mismatch repair protein MutS [Erysipelothrix rhusiopathiae str.
Fujisawa]
gi|334295209|dbj|BAK31080.1| DNA mismatch repair protein MutS [Erysipelothrix rhusiopathiae str.
Fujisawa]
Length = 835
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 50/71 (70%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM+ + L+ GC VP +++TL+ VD+IFTRMGA D++ QST++ E+ E++ + A
Sbjct: 604 RMVALNVILAQIGCYVPCETMTLSLVDQIFTRMGASDDILMGQSTFMVEMMEAQAALSRA 663
Query: 146 SKYSLALVDEL 156
+K+SL L DE+
Sbjct: 664 TKHSLVLFDEI 674
Score = 42.0 bits (97), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D + NL L + E +L ++H T+ G R L+ L++PL N+++I++R I
Sbjct: 247 MDYATMTNLE-LIDHQKGKELSLFHFINHTKTNMGARALKEMLMQPLVNVESIEKRHLQI 305
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
L++ + + + +K+ D+ R++
Sbjct: 306 ETLIEDYLLADSLSHSLKETYDIHRVI 332
>gi|383311132|ref|YP_005363942.1| DNA mismatch repair protein [Pasteurella multocida subsp. multocida
str. HN06]
gi|380872404|gb|AFF24771.1| DNA mismatch repair protein [Pasteurella multocida subsp. multocida
str. HN06]
Length = 860
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPA+S + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 630 TLMAYMGSFVPAESAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATANSLV 689
Query: 152 LVDEL 156
L+DE+
Sbjct: 690 LIDEI 694
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N +E TL LD CVT G R+L+ + +P+ + RQ+ I
Sbjct: 266 LDAATRRNLELTQNLAGGSENTLASVLDKCVTPMGSRLLKRWMHQPIRQHKKLMVRQNRI 325
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ LL Q+ + ++ ++ + D+ER+L
Sbjct: 326 TALL-QQDLVAAIQPYLQQIGDMERIL 351
>gi|373454823|ref|ZP_09546686.1| DNA mismatch repair protein MutS [Dialister succinatiphilus YIT
11850]
gi|371935519|gb|EHO63265.1| DNA mismatch repair protein MutS [Dialister succinatiphilus YIT
11850]
Length = 853
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ G +PA S + +PVDRIFTR+GA D++S QST++ E+ E I+RHA++ SL
Sbjct: 627 TIMAQTGSFIPAKSASFSPVDRIFTRVGATDDISTGQSTFMVEMQEVSHILRHATRNSLI 686
Query: 152 LVDEL 156
L+DE+
Sbjct: 687 LLDEI 691
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 67/138 (48%), Gaps = 11/138 (7%)
Query: 2 LDSTALANLHVLTN-SDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
L L NL + N D +GTL+E LD+ T+ G R+L+ L +PLT+++ I RQD
Sbjct: 258 LSEECLRNLEITRNMRDGGRKGTLLELLDYTHTAMGARLLKRWLERPLTDVNRIILRQDG 317
Query: 61 ISVLLDQKHITE--QMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRM 118
I L + H+TE + + + D ER+L S P D L L R+ +
Sbjct: 318 IEELTN--HMTELTNLEDMLSQVFDFERILSRIEANSTS----PKDLLALKASLRMIPEI 371
Query: 119 GAKDNLSGAQSTYLAELT 136
K LSGA S L ++
Sbjct: 372 --KKLLSGAGSVILKKIN 387
>gi|332024253|gb|EGI64457.1| Putative DNA mismatch repair protein Msh6 [Acromyrmex echinatior]
Length = 1122
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA S +T VDRIFTR+GA D++ QST+L EL+E+ TI++ A+ YSL L+DEL
Sbjct: 928 GSYVPASSCCMTLVDRIFTRLGANDDILAGQSTFLVELSETATILQRATPYSLVLLDEL 986
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 51/88 (57%), Gaps = 6/88 (6%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D+ + NL + EG+LI LDHC T+FGKR+LR + +P I +RQ+A
Sbjct: 533 VIDAVTIKNLRLFG------EGSLINILDHCCTAFGKRLLREWVCRPSCRKTVIIERQEA 586
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ LLD+ + + R + L DLER+L
Sbjct: 587 VQELLDRMDVMQSARIILSTLPDLERLL 614
>gi|407793321|ref|ZP_11140355.1| DNA mismatch repair protein MutS [Idiomarina xiamenensis 10-D-4]
gi|407214944|gb|EKE84785.1| DNA mismatch repair protein MutS [Idiomarina xiamenensis 10-D-4]
Length = 878
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 47/66 (71%)
Query: 91 STFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSL 150
+ L+ G VPAD + P+DRIFTR+GA D+L+ +ST++ E+TE+ TI+ +AS SL
Sbjct: 633 AVILAHIGSYVPADEAVIGPIDRIFTRIGAADDLASGRSTFMVEMTETATILHNASAQSL 692
Query: 151 ALVDEL 156
L+DE+
Sbjct: 693 VLMDEI 698
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 49/88 (55%), Gaps = 2/88 (2%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL LT S + L LDH V++ G R+ + L +PL N + +KQR A
Sbjct: 273 ILDAATRRNLE-LTESFSGAATHLAAVLDHTVSAMGSRLFKRWLHRPLRNQEQLKQRYQA 331
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
++ L + + ++ ++K + D+ER++
Sbjct: 332 VAALTESLFFND-VQQQLKGIGDVERIV 358
>gi|399894486|gb|AFP54329.1| methyl-directed mismatch repair protein, partial [Gilliamella
apicola]
Length = 842
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
LS+ G VPA + PVDRIFTR+GA D+L+ +ST++ E+TE+ IM +A++ SL
Sbjct: 626 VLLSYIGSFVPASKAVIGPVDRIFTRIGASDDLASGRSTFMVEMTETANIMHNATQQSLV 685
Query: 152 LVDEL 156
L+DE+
Sbjct: 686 LMDEI 690
Score = 52.0 bits (123), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N T+ T+ E LD T G RML+ L P+ NL ++ RQ A
Sbjct: 263 VLDAATRRNLEITENLSGGTQNTVAEILDKTQTPMGSRMLKRWLHSPIRNLTILQNRQQA 322
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q +I E + +K + DLER+L
Sbjct: 323 IGEL--QNYIDE-VNPLLKQIGDLERIL 347
>gi|320593113|gb|EFX05522.1| DNA mismatch repair protein [Grosmannia clavigera kw1407]
Length = 1190
Score = 70.5 bits (171), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 974 GCYVPAVSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDEL 1032
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L NL + +N+ N EGTL L+ C+T FGKR+ R L PL ++ I +R D
Sbjct: 598 ILDGQTLINLEIFSNTVNGGPEGTLFNLLNRCITPFGKRLFRKWLCHPLCDIRKINERLD 657
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERM 87
A+ +L + + +Q ++M + DLER+
Sbjct: 658 AVDMLNADRSLRDQFSSEMCKMPDLERL 685
>gi|145547527|ref|XP_001459445.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427270|emb|CAK92048.1| unnamed protein product [Paramecium tetraurelia]
Length = 1084
Score = 70.5 bits (171), Expect = 2e-10, Method: Composition-based stats.
Identities = 34/73 (46%), Positives = 49/73 (67%)
Query: 84 LERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMR 143
L R++ S L+ GC VPA+S +LTP DRIF R+GA D L +ST+ EL E++TI+
Sbjct: 886 LLRLIGVSIILAQIGCAVPANSFSLTPFDRIFCRLGATDRLLEGKSTFFIELEETKTILD 945
Query: 144 HASKYSLALVDEL 156
H++ S ++DEL
Sbjct: 946 HSTSKSFVIIDEL 958
Score = 41.2 bits (95), Expect = 0.14, Method: Composition-based stats.
Identities = 30/95 (31%), Positives = 46/95 (48%), Gaps = 13/95 (13%)
Query: 2 LDSTALANLHV--------LTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDA 53
LD+ L +L + +TNSD +L LD C T GKR+L + PL N ++
Sbjct: 505 LDAQTLESLEIFDVNLKTKVTNSD-----SLFSYLDRCSTYPGKRLLTKWVQSPLQNYNS 559
Query: 54 IKQRQDAISVLLDQKHITEQMRAKMKDLRDLERML 88
I +RQ + L + + + K+ L DLER +
Sbjct: 560 IIERQQCVKELCNFLPQCYEFQKKISSLPDLERAI 594
>gi|323342238|ref|ZP_08082470.1| DNA mismatch repair protein MutS [Erysipelothrix rhusiopathiae ATCC
19414]
gi|322463350|gb|EFY08544.1| DNA mismatch repair protein MutS [Erysipelothrix rhusiopathiae ATCC
19414]
Length = 835
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 50/71 (70%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM+ + L+ GC VP +++TL+ VD+IFTRMGA D++ QST++ E+ E++ + A
Sbjct: 604 RMVALNVILAQIGCYVPCETMTLSLVDQIFTRMGASDDILMGQSTFMVEMMEAQAALSRA 663
Query: 146 SKYSLALVDEL 156
+K+SL L DE+
Sbjct: 664 TKHSLVLFDEI 674
Score = 42.0 bits (97), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 22/87 (25%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D + NL L + E +L ++H T+ G R L+ L++PL N+++I++R I
Sbjct: 247 MDYATMTNLE-LIDHQKGKELSLFHFINHTKTNMGARALKEMLMQPLVNVESIEKRHLQI 305
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
L++ + + + +K+ D+ R++
Sbjct: 306 ETLIEDYLLADSLSHSLKETYDIHRVI 332
>gi|15235223|ref|NP_192116.1| DNA mismatch repair protein Msh6-1 [Arabidopsis thaliana]
gi|6226648|sp|O04716.2|MSH6_ARATH RecName: Full=DNA mismatch repair protein MSH6; Short=AtMSH6;
AltName: Full=MutS protein homolog 6
gi|3912921|gb|AAC78699.1| G/T DNA mismatch repair enzyme [Arabidopsis thaliana]
gi|5763966|emb|CAB53337.1| mismatch repair protein msh6-1 [Arabidopsis thaliana]
gi|7268591|emb|CAB80700.1| G/T DNA mismatch repair enzyme [Arabidopsis thaliana]
gi|332656719|gb|AEE82119.1| DNA mismatch repair protein Msh6-1 [Arabidopsis thaliana]
Length = 1324
Score = 70.5 bits (171), Expect = 3e-10, Method: Composition-based stats.
Identities = 40/110 (36%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 1 ILDSTALANLHVLTNSDNTT-EGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ AL NL + NS N GTL QL+ C+T+ GKR+L+ L +PL N + IK+RQD
Sbjct: 697 VLDAAALENLEIFENSRNGGYSGTLYAQLNQCITASGKRLLKTWLARPLYNTELIKERQD 756
Query: 60 AISVLLDQK-HITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTL 108
A+++L + + + R + L D+ER++ + F S + D + L
Sbjct: 757 AVAILRGENLPYSLEFRKSLSRLPDMERLI-ARMFSSIEASGRNGDKVVL 805
Score = 62.8 bits (151), Expect = 5e-08, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 49/73 (67%)
Query: 84 LERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMR 143
L R + + L+ G VPA++ ++PVD+I RMGAKD++ QST+L EL+E+ ++
Sbjct: 1092 LLRQVCLAVILAQIGADVPAETFEVSPVDKICVRMGAKDHIMAGQSTFLTELSETAVMLT 1151
Query: 144 HASKYSLALVDEL 156
A++ SL ++DEL
Sbjct: 1152 SATRNSLVVLDEL 1164
>gi|361129993|gb|EHL01869.1| putative DNA mismatch repair protein msh6 [Glarea lozoyensis 74030]
Length = 963
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + N+ D +T+GTL L+ CVT FGKRM R + PL + I +R D
Sbjct: 558 VLDGQTLINLEIFANTFDGSTDGTLFALLNRCVTPFGKRMFRQWVCHPLADASKINERLD 617
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ ++ + +++Q + M + DLER++
Sbjct: 618 AVDMINADRSLSDQFISSMTRMPDLERLI 646
>gi|170025639|ref|YP_001722144.1| DNA mismatch repair protein MutS [Yersinia pseudotuberculosis
YPIII]
gi|238688431|sp|B1JJF1.1|MUTS_YERPY RecName: Full=DNA mismatch repair protein MutS
gi|169752173|gb|ACA69691.1| DNA mismatch repair protein MutS [Yersinia pseudotuberculosis
YPIII]
Length = 851
Score = 70.5 bits (171), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHMGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L P+ ++ + RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D I +++ ++ + DLER+L
Sbjct: 328 IGGLQD---IAAELQTPLRQVGDLERIL 352
>gi|425064536|ref|ZP_18467661.1| DNA mismatch repair protein MutS [Pasteurella multocida subsp.
gallicida X73]
gi|404380722|gb|EJZ77211.1| DNA mismatch repair protein MutS [Pasteurella multocida subsp.
gallicida X73]
Length = 860
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPA+S + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 630 TLMAYMGSFVPAESAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATANSLV 689
Query: 152 LVDEL 156
L+DE+
Sbjct: 690 LIDEI 694
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N +E TL LD CVT G R+L+ + +P+ + + RQ+ I
Sbjct: 266 LDAATRRNLELTQNLAGGSENTLASVLDKCVTPMGSRLLKRWMHQPIRQHEKLMVRQNRI 325
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ LL Q+ + ++ ++ + D+ER+L
Sbjct: 326 TALL-QQDLVAAIQPYLQQIGDMERIL 351
>gi|169596160|ref|XP_001791504.1| hypothetical protein SNOG_00833 [Phaeosphaeria nodorum SN15]
gi|160701244|gb|EAT92328.2| hypothetical protein SNOG_00833 [Phaeosphaeria nodorum SN15]
Length = 1217
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD +L NL + NS D + EGTL L+ C+T FGKR+LR + PL + I R D
Sbjct: 625 VLDGQSLINLEIFANSFDGSAEGTLFAMLNRCITPFGKRLLRQWVCHPLADAQKINARLD 684
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L I + A + L DLER++
Sbjct: 685 AVDALNADSTIMDNFSASLSKLPDLERLI 713
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + ++ GC +P S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A
Sbjct: 989 RMTCIAVIMAQVGCYLPCTSAKLTPVDRIMSRLGANDNIFAAQSTFFVELSETQKILSEA 1048
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1049 TPRSLVILDEL 1059
>gi|359448998|ref|ZP_09238503.1| DNA mismatch repair protein MutS [Pseudoalteromonas sp. BSi20480]
gi|358045185|dbj|GAA74752.1| DNA mismatch repair protein MutS [Pseudoalteromonas sp. BSi20480]
Length = 860
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPADS + +DRIFTR+GA D+L+ +ST++ E+TE+ TI+ +A+ SL L+DE+
Sbjct: 644 GCYVPADSAKIGNIDRIFTRIGASDDLASGRSTFMVEMTETATILNNATAQSLVLMDEI 702
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N E TL + LD T+ G R+L+ ++ P+ N D + R +A
Sbjct: 273 ILDAATRKNLELTVNLSGGFENTLAQVLDKTATAMGSRLLKRRIHTPVRNKDELNSRLNA 332
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
IS +LD + + ++ +K++ D+ER++
Sbjct: 333 ISAILDVQ-LCGELHESLKEIGDIERVI 359
>gi|119468991|ref|ZP_01612016.1| DNA mismatch repair protein [Alteromonadales bacterium TW-7]
gi|119447643|gb|EAW28910.1| DNA mismatch repair protein [Alteromonadales bacterium TW-7]
Length = 860
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPADS + +DRIFTR+GA D+L+ +ST++ E+TE+ TI+ +A+ SL L+DE+
Sbjct: 644 GCYVPADSAKIGNIDRIFTRIGASDDLASGRSTFMVEMTETATILNNATAQSLVLMDEI 702
Score = 52.0 bits (123), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N E TL + LD T+ G R+L+ ++ P+ N D + R +A
Sbjct: 273 ILDAATRKNLELTVNLSGGFENTLAQVLDKTATAMGSRLLKRRIHTPVRNKDELNSRLNA 332
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
IS +LD + + ++ +K++ D+ER++
Sbjct: 333 ISAILDAQ-LCGELHESLKEIGDIERVI 359
>gi|429003351|ref|ZP_19071472.1| DNA mismatch repair protein MutS [Escherichia coli 95.0183]
gi|427259762|gb|EKW25794.1| DNA mismatch repair protein MutS [Escherichia coli 95.0183]
Length = 912
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAELQPVLRQVGDLERIL 352
>gi|425066701|ref|ZP_18469821.1| DNA mismatch repair protein MutS [Pasteurella multocida subsp.
gallicida P1059]
gi|404381006|gb|EJZ77493.1| DNA mismatch repair protein MutS [Pasteurella multocida subsp.
gallicida P1059]
Length = 860
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPA+S + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 630 TLMAYMGSFVPAESAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATANSLV 689
Query: 152 LVDEL 156
L+DE+
Sbjct: 690 LIDEI 694
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N +E TL LD CVT G R+L+ + +P+ + + RQ+ I
Sbjct: 266 LDAATRRNLELTQNLAGGSENTLASVLDKCVTPMGSRLLKRWMHQPIRQHEKLMVRQNRI 325
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ LL Q+ + ++ ++ + D+ER+L
Sbjct: 326 TALL-QQDLVAAIQPYLQQIGDMERIL 351
>gi|387770447|ref|ZP_10126627.1| DNA mismatch repair protein MutS [Pasteurella bettyae CCUG 2042]
gi|386904258|gb|EIJ69054.1| DNA mismatch repair protein MutS [Pasteurella bettyae CCUG 2042]
Length = 858
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 78/170 (45%), Gaps = 33/170 (19%)
Query: 2 LDSTALANLHVLTN---------------SDNTTEGTLIEQLDHCVTSFGKRMLRAQLVK 46
L S L+ L VLTN SDN G IE H V +++L+ +
Sbjct: 541 LASLTLSELDVLTNLAERAETLNYVAPTFSDNV--GIYIENGRHPVV---EQVLKEPFIA 595
Query: 47 PLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSL 106
NL+ Q+H+ M R T +++ G VPA+S
Sbjct: 596 NPVNLN-------------QQRHLLIITGPNMGGKSTYMRQTALITLMAYMGSFVPAESA 642
Query: 107 TLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
+ P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL L+DE+
Sbjct: 643 IIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATANSLVLIDEI 692
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 49/87 (56%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N TE TL LD CVT G R+L+ + +P+ ++ +K RQ I
Sbjct: 266 LDAATRRNLELTQNLSGGTENTLASVLDKCVTPMGSRLLKRWIHQPIRQVEKLKYRQQTI 325
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L Q I E ++ ++ + D+ER+L
Sbjct: 326 THILAQDLIAE-LQPYLQQVGDMERIL 351
>gi|340518207|gb|EGR48449.1| DNA repair protein [Trichoderma reesei QM6a]
Length = 1205
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 54/89 (60%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + +N+ N T+GTL L+ C+T FGKR+ R + PL ++ I +R D
Sbjct: 616 VLDGQTLTNLELFSNTVNGNTDGTLFGLLNKCITPFGKRLFRQWVAHPLCDIARINERLD 675
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L D + EQ +++ + DLER++
Sbjct: 676 AVELLNDDPSVREQFASQLVKMPDLERLI 704
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A+ SL ++DEL
Sbjct: 992 GCFVPARSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILAEATPRSLVILDEL 1050
>gi|15603695|ref|NP_246769.1| DNA mismatch repair protein MutS [Pasteurella multocida subsp.
multocida str. Pm70]
gi|417854721|ref|ZP_12499994.1| DNA mismatch repair protein MutS [Pasteurella multocida subsp.
multocida str. Anand1_goat]
gi|13431701|sp|P57972.1|MUTS_PASMU RecName: Full=DNA mismatch repair protein MutS
gi|12722254|gb|AAK03914.1| MutS [Pasteurella multocida subsp. multocida str. Pm70]
gi|338217442|gb|EGP03318.1| DNA mismatch repair protein MutS [Pasteurella multocida subsp.
multocida str. Anand1_goat]
Length = 860
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPA+S + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 630 TLMAYMGSFVPAESAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATANSLV 689
Query: 152 LVDEL 156
L+DE+
Sbjct: 690 LIDEI 694
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N +E TL LD CVT G R+L+ + +P+ + + RQ+ I
Sbjct: 266 LDAATRRNLELTQNLAGGSENTLASVLDKCVTPMGSRLLKRWMHQPIRQHEKLMVRQNRI 325
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ LL Q+ + ++ ++ + D+ER+L
Sbjct: 326 TALL-QQDLVAAIQPYLQQIGDMERIL 351
>gi|392536869|ref|ZP_10284006.1| DNA mismatch repair protein MutS [Pseudoalteromonas marina mano4]
Length = 860
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPADS + +DRIFTR+GA D+L+ +ST++ E+TE+ TI+ +A+ SL L+DE+
Sbjct: 644 GCYVPADSAKIGNIDRIFTRIGASDDLASGRSTFMVEMTETATILNNATAQSLVLMDEI 702
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 50/88 (56%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N E TL + LD T+ G R+L+ ++ P+ N D + R +A
Sbjct: 273 ILDAATRKNLELTVNLSGGFENTLAQVLDKTATAMGSRLLKRRIHTPVRNKDELNSRLNA 332
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
IS +LD + + ++ +K++ D+ER++
Sbjct: 333 ISAILDVQ-LCGELHESLKEIGDIERVI 359
>gi|417851981|ref|ZP_12497629.1| DNA mismatch repair protein MutS [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
gi|338217956|gb|EGP03782.1| DNA mismatch repair protein MutS [Pasteurella multocida subsp.
gallicida str. Anand1_poultry]
Length = 860
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPA+S + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 630 TLMAYMGSFVPAESAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATANSLV 689
Query: 152 LVDEL 156
L+DE+
Sbjct: 690 LIDEI 694
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N +E TL LD CVT G R+L+ + +P+ + + RQ+ I
Sbjct: 266 LDAATRRNLELTQNLAGGSENTLASVLDKCVTPMGSRLLKRWMHQPIRQHEKLMVRQNRI 325
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ LL Q+ + ++ ++ + D+ER+L
Sbjct: 326 TALL-QQDLVAAIQPYLQQIGDMERIL 351
>gi|378775110|ref|YP_005177353.1| DNA mismatch repair protein MutS [Pasteurella multocida 36950]
gi|356597658|gb|AET16384.1| DNA mismatch repair protein MutS [Pasteurella multocida 36950]
Length = 860
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPA+S + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 630 TLMAYMGSFVPAESAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATANSLV 689
Query: 152 LVDEL 156
L+DE+
Sbjct: 690 LIDEI 694
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N +E TL LD CVT G R+L+ + +P+ + + RQ+ I
Sbjct: 266 LDAATRRNLELTQNLAGGSENTLASVLDKCVTPMGSRLLKRWMHQPIRQHEKLMVRQNRI 325
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ LL Q+ + ++ ++ + D+ER+L
Sbjct: 326 TALL-QQDLVAAIQPYLQQIGDMERIL 351
>gi|238784154|ref|ZP_04628168.1| DNA mismatch repair protein mutS [Yersinia bercovieri ATCC 43970]
gi|238715000|gb|EEQ06998.1| DNA mismatch repair protein mutS [Yersinia bercovieri ATCC 43970]
Length = 851
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHMGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 52.0 bits (123), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D+ NL + N TE TL LD VT+ G RML+ L P+ ++ + RQ A
Sbjct: 268 VMDAATRRNLELTLNLSGGTENTLAAILDCSVTAMGSRMLKRWLHMPVRDIKVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D IT +++ ++ + DLER+L
Sbjct: 328 IGGLQD---ITAELQTPLRQVGDLERIL 352
>gi|402759278|ref|ZP_10861534.1| DNA mismatch repair protein MutS [Acinetobacter sp. NCTC 7422]
Length = 892
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G +PA S L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSFIPAKSAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATSQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 35.8 bits (81), Expect = 6.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DA LL H +R +K++
Sbjct: 297 SLFQLINDCQTAMGGRLLSRTLMQPIRDTAVLDARLDATEQLLKGYH-ESPVRLVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|386835122|ref|YP_006240439.1| DNA mismatch repair protein MutS [Pasteurella multocida subsp.
multocida str. 3480]
gi|385201825|gb|AFI46680.1| DNA mismatch repair protein MutS [Pasteurella multocida subsp.
multocida str. 3480]
Length = 828
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPA+S + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 630 TLMAYMGSFVPAESAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATANSLV 689
Query: 152 LVDEL 156
L+DE+
Sbjct: 690 LIDEI 694
Score = 48.5 bits (114), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N +E TL LD CVT G R+L+ + +P+ + + RQ+ I
Sbjct: 266 LDAATRRNLELTQNLAGGSENTLASVLDKCVTPMGSRLLKRWMHQPIRQHEKLMVRQNRI 325
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ LL Q+ + ++ ++ + D+ER+L
Sbjct: 326 TALL-QQDLVAAIQPYLQQIGDMERIL 351
>gi|241950279|ref|XP_002417862.1| mismatch DNA repair protein, mutS homologue, putative [Candida
dubliniensis CD36]
gi|223641200|emb|CAX45579.1| mismatch DNA repair protein, mutS homologue, putative [Candida
dubliniensis CD36]
Length = 1222
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 53/91 (58%)
Query: 66 DQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLS 125
DQ H A L R + LS GC +PA+S LTPVDRI TR+GA DN+
Sbjct: 966 DQPHFGLLTGANAAGKSTLMRTTALAIILSQIGCYIPAESAELTPVDRIMTRLGANDNIL 1025
Query: 126 GAQSTYLAELTESETIMRHASKYSLALVDEL 156
+ST+ EL+E++ I+ +A+ SL ++DEL
Sbjct: 1026 QGKSTFFVELSETKKILSNATPRSLVILDEL 1056
Score = 66.2 bits (160), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTN-SDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L NL +L N SD TT+GTL + ++ TSFGKR L+ ++ PL +D I QR D
Sbjct: 621 ILDGITLNNLEILNNTSDGTTKGTLFKLVNRATTSFGKRQLQKWVLHPLFKVDEINQRYD 680
Query: 60 AISVLL-DQKHITEQMRAKMKDLRDLERML 88
A+ L+ D + ++ + ++ DLER+L
Sbjct: 681 AVDYLMNDGLELRSILQDTLANIPDLERLL 710
>gi|421264596|ref|ZP_15715565.1| DNA mismatch repair protein MutS [Pasteurella multocida subsp.
multocida str. P52VAC]
gi|401688046|gb|EJS83727.1| DNA mismatch repair protein MutS [Pasteurella multocida subsp.
multocida str. P52VAC]
Length = 860
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPA+S + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A+ SL
Sbjct: 630 TLMAYMGSFVPAESAVIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATANSLV 689
Query: 152 LVDEL 156
L+DE+
Sbjct: 690 LIDEI 694
Score = 48.1 bits (113), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 48/87 (55%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N +E TL LD CVT G R+L+ + +P+ + + RQ+ I
Sbjct: 266 LDAATRRNLELTQNLAGGSENTLASVLDKCVTPMGSRLLKRWMHQPIRQHEKLMVRQNRI 325
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
+ LL Q+ + ++ ++ + D+ER+L
Sbjct: 326 TALL-QQDLVAAIQPYLQQIGDMERIL 351
>gi|380473607|emb|CCF46204.1| DNA mismatch repair protein msh6 [Colletotrichum higginsianum]
Length = 555
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDNT-TEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL V +N+ N EGTL L+ CVT FGKR+ R + PL ++ I +R D
Sbjct: 247 VLDGQTLINLEVFSNTVNGGPEGTLFALLNRCVTPFGKRLFRQWVCHPLCDIMRINERLD 306
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ +L + + EQ ++M + DLER++
Sbjct: 307 AVDMLNTDRGVREQFTSQMTKMPDLERLI 335
>gi|349805659|gb|AEQ18302.1| putative muts 6 [Hymenochirus curtipes]
Length = 126
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL +L N N +TEGTL+E+LD C T FGKR+L+ L P+ N +I R +
Sbjct: 13 VLDGVTLTNLEILQNGTNGSTEGTLLEKLDRCFTPFGKRLLKQWLCAPVCNPFSINDRLN 72
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L+ ++ ++ L DLER+L
Sbjct: 73 AVEDLMAVPEKMSEIGELLRKLPDLERLL 101
>gi|452989141|gb|EME88896.1| hypothetical protein MYCFIDRAFT_25225 [Pseudocercospora fijiensis
CIRAD86]
Length = 1117
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/128 (34%), Positives = 68/128 (53%), Gaps = 5/128 (3%)
Query: 29 DHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLRDLERML 88
DH + + LR ++ TN + I++ DQ IT A + RM
Sbjct: 836 DHARSVLEFQTLRHPCIETTTNF-----IPNDIALGGDQASITLLTGANAAGKSTILRMT 890
Query: 89 PSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKY 148
+ L+ GC VP +S +TPVDRI +R+GA DN+ QST++ EL+E++ I+ A+
Sbjct: 891 CIAVILAQIGCYVPCESARMTPVDRIMSRLGAHDNIFAGQSTFMVELSETKKILAEATPR 950
Query: 149 SLALVDEL 156
SL ++DEL
Sbjct: 951 SLVILDEL 958
Score = 65.1 bits (157), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD +L NL + N+ D +TEGTL L+ CVT GKR LR + PL + I +R D
Sbjct: 521 VLDGQSLINLEIFANTFDGSTEGTLFTMLNRCVTPSGKRTLRQWVCHPLADARKINERFD 580
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L + ++ A + L DLER++
Sbjct: 581 AVDALNADGTVMDRFTASLSRLPDLERLI 609
>gi|13241544|gb|AAK16365.1| DNA mismatch repair protein MutS [Escherichia coli]
Length = 126
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 48/63 (76%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+
Sbjct: 30 MAYIGSFVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLM 89
Query: 154 DEL 156
DE+
Sbjct: 90 DEI 92
>gi|393212242|gb|EJC97743.1| DNA mismatch repair protein Msh6 [Fomitiporia mediterranea MF3/22]
Length = 1254
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/101 (36%), Positives = 55/101 (54%), Gaps = 3/101 (2%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD LA++ VL NS+ T EG+L+ L C+T FGKR+ R L PL + AI R DA
Sbjct: 650 VLDGQTLAHVEVLQNSEGTDEGSLLRILQRCITPFGKRLFRIWLCVPLREVSAINARLDA 709
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRV 101
+ L+D K + DLER++ + + + C+V
Sbjct: 710 VQDLIDHPTFEHDFTQLAKGIPDLERIV---SRIHAKNCKV 747
Score = 55.5 bits (132), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + ++ G VPA ++PVD I TRMGA DN+ ST+ EL E I+R A
Sbjct: 1018 RMTAAGVIMAQLGMLVPARRARISPVDAILTRMGAYDNMFSNASTFKVELDECCKILREA 1077
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1078 TPRSLVILDEL 1088
>gi|240281683|gb|EER45186.1| DNA mismatch repair protein [Ajellomyces capsulatus H143]
Length = 519
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM ++ ++ GC VP S LTPVDRI +R+GA DN+ +QST+ EL+E++ I+ A
Sbjct: 285 RMTCTAVIMAQIGCYVPCQSARLTPVDRIMSRLGANDNIFASQSTFFVELSETKKILSEA 344
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 345 TPRSLVILDEL 355
>gi|94501246|ref|ZP_01307768.1| DNA mismatch repair protein MutS [Bermanella marisrubri]
gi|94426673|gb|EAT11659.1| DNA mismatch repair protein MutS [Oceanobacter sp. RED65]
Length = 895
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/64 (48%), Positives = 47/64 (73%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L+ G VPADS T+ +DRIFTRMG+ D+++G +ST++ E+TE+ I+ HA+ SL L
Sbjct: 647 LLAHIGSYVPADSATIGLLDRIFTRMGSSDDVAGGRSTFMVEMTETANILHHATAQSLVL 706
Query: 153 VDEL 156
+DE+
Sbjct: 707 MDEV 710
Score = 52.4 bits (124), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D+ NL + N + T+ TL LD T+ G R+LR L +PL +K+RQ A
Sbjct: 281 VMDAATRKNLEIDINLNGDTDFTLAWVLDRTATAMGSRLLRRWLNRPLRQQSVLKERQHA 340
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I ++ + H E + +K + D+ER+L
Sbjct: 341 IGAMI-ETHGYEDIHNVLKQIGDIERIL 367
>gi|406904101|gb|EKD45986.1| hypothetical protein ACD_69C00059G0003 [uncultured bacterium]
Length = 862
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ +SL
Sbjct: 637 TILAYIGSFVPAKKVVIGPIDRIFTRIGAVDDLASGRSTFMVEMTETANILNNATSHSLV 696
Query: 152 LVDEL 156
L+DE+
Sbjct: 697 LMDEI 701
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+T NL ++ N T TL + LD TS G R+LR L +PL N + + +RQ+A
Sbjct: 272 ILDATTQRNLELVNNLQGGTNNTLADILDQTATSMGSRLLRRWLKRPLYNQEVLFERQEA 331
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
IS L + I E + + ++++ D+ER+L
Sbjct: 332 ISDLQATQVINE-LYSTLRNIGDIERIL 358
>gi|126641297|ref|YP_001084281.1| mismatch repair protein [Acinetobacter baumannii ATCC 17978]
gi|126387181|gb|ABO11679.1| mismatch repair protein [Acinetobacter baumannii ATCC 17978]
Length = 573
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 336 SLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 395
Query: 152 LVDEL 156
L+DE+
Sbjct: 396 LMDEV 400
>gi|13241500|gb|AAK16343.1| DNA mismatch repair protein MutS [Escherichia coli]
Length = 126
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+++ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 29 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDMASGRSTFMVEMTETANILHNATEYSLVL 88
Query: 153 VDEL 156
+DE+
Sbjct: 89 MDEI 92
>gi|448348704|ref|ZP_21537552.1| DNA mismatch repair protein MutS [Natrialba taiwanensis DSM 12281]
gi|445642365|gb|ELY95433.1| DNA mismatch repair protein MutS [Natrialba taiwanensis DSM 12281]
Length = 901
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 49/71 (69%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
R + L+ G VPA+S LTPVDRIFTR+GA D+++G +ST++ E+ E TI+R A
Sbjct: 673 RQVAQIVLLAQVGSFVPAESARLTPVDRIFTRVGASDDIAGGRSTFMVEMDELATILRDA 732
Query: 146 SKYSLALVDEL 156
+ SL L+DE+
Sbjct: 733 DERSLVLLDEV 743
Score = 41.6 bits (96), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 42/90 (46%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTNSD--NTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQ 58
+LD+ AL +L + + TL+ LD + G R LR L +PL I+ R
Sbjct: 306 LLDAVALRSLELFEPRAVRGREDATLVGVLDETACALGGRKLRDWLRRPLLEPRRIEARH 365
Query: 59 DAISVLLDQKHITEQMRAKMKDLRDLERML 88
DA+ L E ++D+ DLER++
Sbjct: 366 DAVEELTGSVQTREHCHELLRDVYDLERLI 395
>gi|417547227|ref|ZP_12198313.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC032]
gi|421665424|ref|ZP_16105537.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC087]
gi|421672808|ref|ZP_16112762.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC099]
gi|400385115|gb|EJP43793.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC032]
gi|410378502|gb|EKP31120.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC099]
gi|410390182|gb|EKP42579.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC087]
Length = 881
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 35.8 bits (81), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRILMQPVRDTALLDARLDAIEQLIQGYH-ENPVRMVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|169632885|ref|YP_001706621.1| DNA mismatch repair protein MutS [Acinetobacter baumannii SDF]
gi|238688262|sp|B0VUC9.1|MUTS_ACIBS RecName: Full=DNA mismatch repair protein MutS
gi|169151677|emb|CAP00467.1| methyl-directed mismatch repair, recognize exocyclic adducts of
guanosine [Acinetobacter baumannii]
Length = 881
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 36.2 bits (82), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYH-ESPVRLVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|85058509|ref|YP_454211.1| DNA mismatch repair protein MutS [Sodalis glossinidius str.
'morsitans']
gi|123520023|sp|Q2NVL9.1|MUTS_SODGM RecName: Full=DNA mismatch repair protein MutS
gi|84779029|dbj|BAE73806.1| DNA mismatch repair protein MutS [Sodalis glossinidius str.
'morsitans']
Length = 854
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL
Sbjct: 631 VLLAYIGSFVPADEATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATHQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 66/136 (48%), Gaps = 11/136 (8%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D+ NL + N E TL + LD VT G RML+ L P ++ + RQ +
Sbjct: 268 VMDAATRRNLELTQNLSGGGENTLADVLDRTVTPMGSRMLKRWLHMPTRDITTLTYRQQS 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGA 120
I L Q H+ E ++ ++ + DLER+L L+ + R P D L + FT++ A
Sbjct: 328 IRAL--QDHVAE-LQPLLRQVGDLERVLAR---LALRSAR-PRD---LARMRYAFTQLPA 377
Query: 121 KDNLSGAQS-TYLAEL 135
L QS YL +L
Sbjct: 378 IQALLCGQSEPYLPQL 393
>gi|449298624|gb|EMC94639.1| hypothetical protein BAUCODRAFT_111690 [Baudoinia compniacensis
UAMH 10762]
Length = 1206
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD +L NL + N+ D +TEGTL L+ C+T FGKR LR + PL + I QR D
Sbjct: 607 VLDGQSLINLEIFANTFDGSTEGTLFNMLNRCITPFGKRTLRQWVCHPLADPRRIDQRLD 666
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L + ++ A + L DLER++
Sbjct: 667 AVDALNADSTVMDRFTASLSRLPDLERLI 695
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 49/71 (69%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + L+ GC VP +S +TPVDRI +R+GA+DN+ QST++ EL+E++ I+ A
Sbjct: 974 RMTCVAVILAQIGCYVPCNSARMTPVDRIMSRLGAQDNIFAGQSTFMVELSETKKILSEA 1033
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1034 TPRSLVILDEL 1044
>gi|421675606|ref|ZP_16115526.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC065]
gi|421693011|ref|ZP_16132658.1| DNA mismatch repair protein MutS [Acinetobacter baumannii IS-116]
gi|404559064|gb|EKA64336.1| DNA mismatch repair protein MutS [Acinetobacter baumannii IS-116]
gi|410381868|gb|EKP34429.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC065]
Length = 881
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYH-ESPVRLVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|421788729|ref|ZP_16225009.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Naval-82]
gi|410401288|gb|EKP53438.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Naval-82]
Length = 881
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 36.2 bits (82), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYH-ESPVRMVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|421694268|ref|ZP_16133893.1| DNA mismatch repair protein MutS [Acinetobacter baumannii WC-692]
gi|424060437|ref|ZP_17797928.1| DNA mismatch repair protein mutS [Acinetobacter baumannii Ab33333]
gi|445492772|ref|ZP_21460618.1| DNA mismatch repair protein MutS [Acinetobacter baumannii AA-014]
gi|404568270|gb|EKA73374.1| DNA mismatch repair protein MutS [Acinetobacter baumannii WC-692]
gi|404668389|gb|EKB36298.1| DNA mismatch repair protein mutS [Acinetobacter baumannii Ab33333]
gi|444762976|gb|ELW87322.1| DNA mismatch repair protein MutS [Acinetobacter baumannii AA-014]
Length = 881
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYH-ESPVRLVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|403675319|ref|ZP_10937498.1| DNA mismatch repair protein MutS [Acinetobacter sp. NCTC 10304]
Length = 881
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 35.8 bits (81), Expect = 6.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRILMQPVRDTALLDARLDAIEQLIQGYH-ESPVRMVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|417551140|ref|ZP_12202218.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Naval-18]
gi|417563595|ref|ZP_12214469.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC143]
gi|395555351|gb|EJG21352.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC143]
gi|400385595|gb|EJP48670.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Naval-18]
Length = 881
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYH-ESPVRLVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|374849924|dbj|BAL52926.1| DNA mismatch repair protein MutS [uncultured beta proteobacterium]
Length = 866
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 48/66 (72%)
Query: 91 STFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSL 150
+T L+ G VPA + TL P+D I+TR+GA D+L+ +ST++ E++E+ I+RHA +SL
Sbjct: 624 ATLLAHVGSFVPAKAATLGPIDAIYTRIGASDDLASGRSTFMVEMSEAAYILRHAGPHSL 683
Query: 151 ALVDEL 156
L+DE+
Sbjct: 684 VLMDEV 689
Score = 37.4 bits (85), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 39/86 (45%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD T NL + TL+ LD T+ G R LR L PL + I +RQ I
Sbjct: 259 LDPTTRRNLELTETLRGEASPTLLSTLDFTQTAMGSRWLRHALHHPLRDRTEIVRRQALI 318
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ + + ++ ++ + DLER+
Sbjct: 319 AFWRNDAPLRQRANECLRRIADLERI 344
>gi|260549540|ref|ZP_05823758.1| mismatch repair ATPase [Acinetobacter sp. RUH2624]
gi|424056166|ref|ZP_17793687.1| DNA mismatch repair protein mutS [Acinetobacter nosocomialis
Ab22222]
gi|425739695|ref|ZP_18857891.1| DNA mismatch repair protein MutS [Acinetobacter baumannii WC-487]
gi|260407333|gb|EEX00808.1| mismatch repair ATPase [Acinetobacter sp. RUH2624]
gi|407441612|gb|EKF48117.1| DNA mismatch repair protein mutS [Acinetobacter nosocomialis
Ab22222]
gi|425496089|gb|EKU62231.1| DNA mismatch repair protein MutS [Acinetobacter baumannii WC-487]
Length = 881
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYH-ESPVRLVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|253997025|ref|YP_003049089.1| DNA mismatch repair protein MutS [Methylotenera mobilis JLW8]
gi|253983704|gb|ACT48562.1| DNA mismatch repair protein MutS [Methylotenera mobilis JLW8]
Length = 874
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ GC VPA S+ + +DRI TR+GA D+L+G +ST++ E+TE+ I+ +AS SL
Sbjct: 645 VLLAYCGCYVPATSVKIGEIDRIMTRIGASDDLAGGRSTFMVEMTETANILHNASDKSLV 704
Query: 152 LVDEL 156
L+DE+
Sbjct: 705 LLDEI 709
>gi|445406296|ref|ZP_21431734.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Naval-57]
gi|444781584|gb|ELX05501.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Naval-57]
Length = 881
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYH-ESPVRLVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|445443234|ref|ZP_21442569.1| DNA mismatch repair protein MutS [Acinetobacter baumannii WC-A-92]
gi|444762805|gb|ELW87157.1| DNA mismatch repair protein MutS [Acinetobacter baumannii WC-A-92]
Length = 881
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYH-ESPVRLVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|260555570|ref|ZP_05827791.1| DNA mismatch repair protein MutS [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|260412112|gb|EEX05409.1| DNA mismatch repair protein MutS [Acinetobacter baumannii ATCC
19606 = CIP 70.34]
gi|452948878|gb|EME54350.1| DNA mismatch repair protein MutS [Acinetobacter baumannii MSP4-16]
Length = 881
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 36.2 bits (82), Expect = 5.0, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYH-ESPVRLVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|239503730|ref|ZP_04663040.1| DNA mismatch repair protein [Acinetobacter baumannii AB900]
gi|421678917|ref|ZP_16118799.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC111]
gi|410391840|gb|EKP44204.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC111]
Length = 881
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 36.2 bits (82), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYH-ESPVRMVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|261367034|ref|ZP_05979917.1| DNA mismatch repair protein MutS [Subdoligranulum variabile DSM
15176]
gi|282571152|gb|EFB76687.1| DNA mismatch repair protein MutS [Subdoligranulum variabile DSM
15176]
Length = 872
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA S + VD IFTR+GA D+L+ QST++ E+TE I+RHASK SL ++DE+
Sbjct: 652 GCFVPAASAHIGVVDAIFTRVGASDDLAAGQSTFMVEMTEVAEILRHASKNSLVILDEI 710
Score = 42.7 bits (99), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 36/66 (54%)
Query: 22 GTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDL 81
GTL+ LD TS GKR+LR+ + +PL + +AI R A+ L ++ + +
Sbjct: 299 GTLLWVLDKTETSMGKRLLRSWIEQPLVDAEAINARLSAVQALYTANIARADLKEALSHV 358
Query: 82 RDLERM 87
D+ER+
Sbjct: 359 FDIERL 364
>gi|37524723|ref|NP_928067.1| DNA mismatch repair protein [Photorhabdus luminescens subsp.
laumondii TTO1]
gi|44888166|sp|Q7N8K0.1|MUTS_PHOLL RecName: Full=DNA mismatch repair protein MutS
gi|36784148|emb|CAE13017.1| DNA mismatch repair protein MutS [Photorhabdus luminescens subsp.
laumondii TTO1]
Length = 851
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA+ + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 TLLAYIGSFVPAEKAVIGPVDRIFTRVGASDDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +T+ TL LD CVT G RML+ L P+ + ++ RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGSTDNTLASVLDLCVTPMGSRMLKRWLHAPVRDRQILENRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I+ L + I +++ + + DLER+L
Sbjct: 328 IATL---QEIGLELQPFLLQIGDLERVL 352
>gi|422009815|ref|ZP_16356798.1| DNA mismatch repair protein MutS [Providencia rettgeri Dmel1]
gi|414093633|gb|EKT55305.1| DNA mismatch repair protein MutS [Providencia rettgeri Dmel1]
Length = 855
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL
Sbjct: 631 TLLAYIGSFVPASKAVIGPIDRIFTRVGASDDLASGRSTFMVEMTETANILHNATEHSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N TE TL LD CVT G RML+ L PL N+ + RQ A
Sbjct: 268 ILDAATRRNLEITQNLAGGTENTLAAILDRCVTPMGSRMLKRWLHTPLRNIQILNNRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
IS L + +++ ++ + DLER+L
Sbjct: 328 ISAL---QECGFELQPFLRQIGDLERVL 352
>gi|296811026|ref|XP_002845851.1| DNA mismatch repair protein msh6 [Arthroderma otae CBS 113480]
gi|238843239|gb|EEQ32901.1| DNA mismatch repair protein msh6 [Arthroderma otae CBS 113480]
Length = 1216
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM ++ ++ GC VP + LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A
Sbjct: 982 RMTCTAVIMAQIGCYVPCEYARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEA 1041
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1042 TPRSLVILDEL 1052
Score = 68.6 bits (166), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + N+ D ++EGTL + L+ CVT FGKR+ + + PL ++ I R D
Sbjct: 617 VLDGQTLINLEIFANTYDGSSEGTLFQLLNRCVTPFGKRLFKQWVCHPLVDIAKINARLD 676
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L + EQ +++ + DLER++
Sbjct: 677 AVESLNADNTVREQFSSQLTKMPDLERLI 705
>gi|169796507|ref|YP_001714300.1| DNA mismatch repair protein MutS [Acinetobacter baumannii AYE]
gi|184157560|ref|YP_001845899.1| DNA mismatch repair protein MutS [Acinetobacter baumannii ACICU]
gi|213156380|ref|YP_002318800.1| DNA mismatch repair protein MutS [Acinetobacter baumannii AB0057]
gi|215483970|ref|YP_002326195.1| DNA mismatch repair protein MutS [Acinetobacter baumannii
AB307-0294]
gi|301347835|ref|ZP_07228576.1| DNA mismatch repair protein MutS [Acinetobacter baumannii AB056]
gi|301511666|ref|ZP_07236903.1| DNA mismatch repair protein MutS [Acinetobacter baumannii AB058]
gi|301597647|ref|ZP_07242655.1| DNA mismatch repair protein MutS [Acinetobacter baumannii AB059]
gi|332855545|ref|ZP_08435931.1| DNA mismatch repair protein MutS [Acinetobacter baumannii 6013150]
gi|332870218|ref|ZP_08439113.1| DNA mismatch repair protein MutS [Acinetobacter baumannii 6013113]
gi|332874294|ref|ZP_08442213.1| DNA mismatch repair protein MutS [Acinetobacter baumannii 6014059]
gi|384131654|ref|YP_005514266.1| mutS [Acinetobacter baumannii 1656-2]
gi|384142646|ref|YP_005525356.1| methyl-directed mismatch repair, recognize exocyclic adducts of
guanosine [Acinetobacter baumannii MDR-ZJ06]
gi|385236974|ref|YP_005798313.1| DNA mismatch repair protein MutS [Acinetobacter baumannii
TCDC-AB0715]
gi|387124475|ref|YP_006290357.1| DNA mismatch repair protein MutS [Acinetobacter baumannii MDR-TJ]
gi|407932298|ref|YP_006847941.1| methyl-directed mismatch repair, recognize exocyclic adducts of
guanosine [Acinetobacter baumannii TYTH-1]
gi|416148480|ref|ZP_11602391.1| DNA mismatch repair protein MutS [Acinetobacter baumannii AB210]
gi|417568718|ref|ZP_12219581.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC189]
gi|417572857|ref|ZP_12223711.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Canada
BC-5]
gi|417578901|ref|ZP_12229734.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Naval-17]
gi|417869490|ref|ZP_12514475.1| DNA mismatch repair protein MutS [Acinetobacter baumannii ABNIH1]
gi|417872944|ref|ZP_12517827.1| DNA mismatch repair protein MutS [Acinetobacter baumannii ABNIH2]
gi|417878928|ref|ZP_12523521.1| DNA mismatch repair protein MutS [Acinetobacter baumannii ABNIH3]
gi|417881928|ref|ZP_12526237.1| DNA mismatch repair protein MutS [Acinetobacter baumannii ABNIH4]
gi|421203727|ref|ZP_15660862.1| DNA mismatch repair protein MutS [Acinetobacter baumannii AC12]
gi|421533818|ref|ZP_15980098.1| DNA mismatch repair protein MutS [Acinetobacter baumannii AC30]
gi|421622154|ref|ZP_16063062.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC074]
gi|421624043|ref|ZP_16064921.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC098]
gi|421629205|ref|ZP_16069945.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC180]
gi|421644124|ref|ZP_16084609.1| DNA mismatch repair protein MutS [Acinetobacter baumannii IS-235]
gi|421648275|ref|ZP_16088682.1| DNA mismatch repair protein MutS [Acinetobacter baumannii IS-251]
gi|421657664|ref|ZP_16097914.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Naval-83]
gi|421686952|ref|ZP_16126688.1| DNA mismatch repair protein MutS [Acinetobacter baumannii IS-143]
gi|421700500|ref|ZP_16140014.1| DNA mismatch repair protein MutS [Acinetobacter baumannii IS-58]
gi|421703097|ref|ZP_16142564.1| DNA mismatch repair protein MutS [Acinetobacter baumannii ZWS1122]
gi|421706817|ref|ZP_16146220.1| DNA mismatch repair protein MutS [Acinetobacter baumannii ZWS1219]
gi|421790893|ref|ZP_16227083.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Naval-2]
gi|421797767|ref|ZP_16233803.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Naval-21]
gi|421799725|ref|ZP_16235715.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Canada
BC1]
gi|424052903|ref|ZP_17790435.1| DNA mismatch repair protein mutS [Acinetobacter baumannii Ab11111]
gi|424064394|ref|ZP_17801879.1| DNA mismatch repair protein mutS [Acinetobacter baumannii Ab44444]
gi|425755144|ref|ZP_18872966.1| DNA mismatch repair protein MutS [Acinetobacter baumannii
Naval-113]
gi|445464161|ref|ZP_21449544.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC338]
gi|445481102|ref|ZP_21455764.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Naval-78]
gi|226723048|sp|B7GW85.1|MUTS_ACIB3 RecName: Full=DNA mismatch repair protein MutS
gi|226723049|sp|B7IBV9.1|MUTS_ACIB5 RecName: Full=DNA mismatch repair protein MutS
gi|238688089|sp|B0VAU7.1|MUTS_ACIBY RecName: Full=DNA mismatch repair protein MutS
gi|238690992|sp|B2HX50.1|MUTS_ACIBC RecName: Full=DNA mismatch repair protein MutS
gi|169149434|emb|CAM87320.1| methyl-directed mismatch repair, recognize exocyclic adducts of
guanosine [Acinetobacter baumannii AYE]
gi|183209154|gb|ACC56552.1| Mismatch repair ATPase (MutS family) [Acinetobacter baumannii
ACICU]
gi|213055540|gb|ACJ40442.1| DNA mismatch repair protein MutS [Acinetobacter baumannii AB0057]
gi|213985940|gb|ACJ56239.1| DNA mismatch repair protein MutS [Acinetobacter baumannii
AB307-0294]
gi|322507874|gb|ADX03328.1| mutS [Acinetobacter baumannii 1656-2]
gi|323517471|gb|ADX91852.1| DNA mismatch repair protein MutS [Acinetobacter baumannii
TCDC-AB0715]
gi|332727402|gb|EGJ58834.1| DNA mismatch repair protein MutS [Acinetobacter baumannii 6013150]
gi|332732385|gb|EGJ63642.1| DNA mismatch repair protein MutS [Acinetobacter baumannii 6013113]
gi|332737519|gb|EGJ68427.1| DNA mismatch repair protein MutS [Acinetobacter baumannii 6014059]
gi|333365001|gb|EGK47015.1| DNA mismatch repair protein MutS [Acinetobacter baumannii AB210]
gi|342230353|gb|EGT95193.1| DNA mismatch repair protein MutS [Acinetobacter baumannii ABNIH1]
gi|342230878|gb|EGT95701.1| DNA mismatch repair protein MutS [Acinetobacter baumannii ABNIH3]
gi|342232749|gb|EGT97520.1| DNA mismatch repair protein MutS [Acinetobacter baumannii ABNIH2]
gi|342238460|gb|EGU02892.1| DNA mismatch repair protein MutS [Acinetobacter baumannii ABNIH4]
gi|347593140|gb|AEP05861.1| methyl-directed mismatch repair, recognize exocyclic adducts of
guanosine [Acinetobacter baumannii MDR-ZJ06]
gi|385878967|gb|AFI96062.1| DNA mismatch repair protein MutS [Acinetobacter baumannii MDR-TJ]
gi|395555013|gb|EJG21015.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC189]
gi|395568039|gb|EJG28713.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Naval-17]
gi|398326771|gb|EJN42914.1| DNA mismatch repair protein MutS [Acinetobacter baumannii AC12]
gi|400208425|gb|EJO39395.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Canada
BC-5]
gi|404566416|gb|EKA71562.1| DNA mismatch repair protein MutS [Acinetobacter baumannii IS-143]
gi|404570031|gb|EKA75114.1| DNA mismatch repair protein MutS [Acinetobacter baumannii IS-58]
gi|404670981|gb|EKB38850.1| DNA mismatch repair protein mutS [Acinetobacter baumannii Ab11111]
gi|404673130|gb|EKB40929.1| DNA mismatch repair protein mutS [Acinetobacter baumannii Ab44444]
gi|407192933|gb|EKE64106.1| DNA mismatch repair protein MutS [Acinetobacter baumannii ZWS1122]
gi|407193216|gb|EKE64384.1| DNA mismatch repair protein MutS [Acinetobacter baumannii ZWS1219]
gi|407900879|gb|AFU37710.1| methyl-directed mismatch repair, recognize exocyclic adducts of
guanosine [Acinetobacter baumannii TYTH-1]
gi|408505935|gb|EKK07651.1| DNA mismatch repair protein MutS [Acinetobacter baumannii IS-235]
gi|408515636|gb|EKK17219.1| DNA mismatch repair protein MutS [Acinetobacter baumannii IS-251]
gi|408696411|gb|EKL41950.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC074]
gi|408702555|gb|EKL47965.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC098]
gi|408702919|gb|EKL48326.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC180]
gi|408711650|gb|EKL56851.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Naval-83]
gi|409988271|gb|EKO44444.1| DNA mismatch repair protein MutS [Acinetobacter baumannii AC30]
gi|410395961|gb|EKP48246.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Naval-21]
gi|410404311|gb|EKP56379.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Naval-2]
gi|410409266|gb|EKP61199.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Canada
BC1]
gi|425495186|gb|EKU61375.1| DNA mismatch repair protein MutS [Acinetobacter baumannii
Naval-113]
gi|444770788|gb|ELW94930.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Naval-78]
gi|444780057|gb|ELX04029.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC338]
Length = 881
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYH-ESPVRLVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|421652192|ref|ZP_16092555.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC0162]
gi|425750961|ref|ZP_18868915.1| DNA mismatch repair protein MutS [Acinetobacter baumannii WC-348]
gi|445457341|ref|ZP_21446486.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC047]
gi|408506465|gb|EKK08173.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC0162]
gi|425484746|gb|EKU51146.1| DNA mismatch repair protein MutS [Acinetobacter baumannii WC-348]
gi|444776921|gb|ELX00958.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC047]
Length = 881
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYH-ESPVRLVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|417552544|ref|ZP_12203614.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Naval-81]
gi|417560180|ref|ZP_12211059.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC137]
gi|421199246|ref|ZP_15656410.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC109]
gi|421456115|ref|ZP_15905458.1| DNA mismatch repair protein MutS [Acinetobacter baumannii IS-123]
gi|421633047|ref|ZP_16073690.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Naval-13]
gi|421805159|ref|ZP_16241052.1| DNA mismatch repair protein MutS [Acinetobacter baumannii WC-A-694]
gi|395522762|gb|EJG10851.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC137]
gi|395565213|gb|EJG26861.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC109]
gi|400211213|gb|EJO42176.1| DNA mismatch repair protein MutS [Acinetobacter baumannii IS-123]
gi|400392803|gb|EJP59849.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Naval-81]
gi|408707766|gb|EKL53049.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Naval-13]
gi|410409757|gb|EKP61681.1| DNA mismatch repair protein MutS [Acinetobacter baumannii WC-A-694]
Length = 881
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 36.2 bits (82), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYH-ESPVRLVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|421664814|ref|ZP_16104950.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC110]
gi|408711985|gb|EKL57177.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC110]
Length = 881
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 36.2 bits (82), Expect = 5.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQFVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYH-ESPVRLVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|383621870|ref|ZP_09948276.1| DNA mismatch repair protein MutS [Halobiforma lacisalsi AJ5]
gi|448702798|ref|ZP_21700155.1| DNA mismatch repair protein MutS [Halobiforma lacisalsi AJ5]
gi|445776891|gb|EMA27867.1| DNA mismatch repair protein MutS [Halobiforma lacisalsi AJ5]
Length = 964
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 6/101 (5%)
Query: 62 SVLLDQKHITEQMR------AKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIF 115
S + + H+TE R M R + L+ G VPA S LTPVDRIF
Sbjct: 653 SFVPNDAHLTEDRRLAVITGPNMSGKSTYMRQVAQIVLLAQVGSFVPAKSARLTPVDRIF 712
Query: 116 TRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
TR+GA D+++G +ST++ E+ E TI+R A + SL L+DE+
Sbjct: 713 TRVGASDDIAGGRSTFMVEMDELATILREADERSLVLLDEV 753
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTNS--DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQ 58
+LD+ AL +L + E TL+ LD ++ G R LR L +PL D I+ R
Sbjct: 315 LLDAVALRSLELFEPRAVRGRDEATLVGVLDETASALGGRKLRDWLRRPLLEPDRIEARL 374
Query: 59 DAISVLLDQKHITEQMRAKMKDLRDLERML 88
DA+ L E+++ ++D+ DLER++
Sbjct: 375 DAVEELKSGVRTREELQELLRDVYDLERLI 404
>gi|253988177|ref|YP_003039533.1| dna mismatch repair protein muts [Photorhabdus asymbiotica]
gi|253779627|emb|CAQ82788.1| dna mismatch repair protein muts [Photorhabdus asymbiotica]
Length = 851
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA+ + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 TLLAYIGSFVPAEKAVIGPVDRIFTRVGASDDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 49.3 bits (116), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +T+ TL LD CVT G RML+ L P+ + ++ RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGSTDNTLASVLDLCVTPMGSRMLKRWLHAPVRDRQILENRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I+ L + I +++ + + DLER+L
Sbjct: 328 IATL---QEIGLELQPFLLQVGDLERVL 352
>gi|120598087|ref|YP_962661.1| DNA mismatch repair protein MutS [Shewanella sp. W3-18-1]
gi|146293842|ref|YP_001184266.1| DNA mismatch repair protein MutS [Shewanella putrefaciens CN-32]
gi|166232137|sp|A4Y934.1|MUTS_SHEPC RecName: Full=DNA mismatch repair protein MutS
gi|166232139|sp|A1RHG2.1|MUTS_SHESW RecName: Full=DNA mismatch repair protein MutS
gi|120558180|gb|ABM24107.1| DNA mismatch repair protein MutS [Shewanella sp. W3-18-1]
gi|145565532|gb|ABP76467.1| DNA mismatch repair protein MutS [Shewanella putrefaciens CN-32]
Length = 856
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ GC VPA+ + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL
Sbjct: 635 TLMAHIGCFVPAERAVIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATAQSLV 694
Query: 152 LVDEL 156
L+DE+
Sbjct: 695 LMDEI 699
Score = 44.7 bits (104), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N + TL LD+ T+ G RML+ + +PL + + I RQ A
Sbjct: 270 VLDAATRRNLELTQNLAGGRDNTLAAVLDNTATAMGSRMLQRWIHQPLRDPNQIIARQTA 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
++ LL + E + ++K L D+ER++
Sbjct: 330 VNELL-KTGTHEPLHEQLKALGDIERIM 356
>gi|403053791|ref|ZP_10908275.1| DNA mismatch repair protein MutS [Acinetobacter bereziniae LMG
1003]
Length = 645
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 405 SLLAYCGSFVPAKAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 464
Query: 152 LVDEL 156
L+DE+
Sbjct: 465 LMDEV 469
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L ++ C T+ G R+L L++P+ + + +R DA LL H +R +K++
Sbjct: 58 SLFSLINDCQTAMGSRLLARTLMQPIRDTQILDERLDATDTLLKGYH-EAPVRLVLKEIG 116
Query: 83 DLERML 88
D+ER+L
Sbjct: 117 DIERVL 122
>gi|268591354|ref|ZP_06125575.1| DNA mismatch repair protein MutS [Providencia rettgeri DSM 1131]
gi|291313331|gb|EFE53784.1| DNA mismatch repair protein MutS [Providencia rettgeri DSM 1131]
Length = 855
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL
Sbjct: 631 TLLAYIGSFVPASKAVIGPIDRIFTRVGASDDLASGRSTFMVEMTETANILHNATEHSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 57.8 bits (138), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N TE TL LD CVT G RML+ L PL N+ + RQ A
Sbjct: 268 ILDAATRRNLEITQNLAGGTENTLAAILDMCVTPMGSRMLKRWLHTPLRNIQVLNNRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
IS L + +++ ++ + DLER+L
Sbjct: 328 ISAL---QECGFELQPFLRQIGDLERVL 352
>gi|189083238|sp|Q2SBR5.2|MUTS_HAHCH RecName: Full=DNA mismatch repair protein MutS
Length = 860
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPA + + P+DR+FTRMG+ D+++G +ST++ E+TE+ I+ +A++ SL
Sbjct: 635 VILAYCGSFVPAAKVVIGPIDRVFTRMGSSDDIAGGRSTFMVEMTETANILHYATRQSLV 694
Query: 152 LVDEL 156
L+DE+
Sbjct: 695 LMDEV 699
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ + NL + N TL +D T+ G RMLR L +PL + + ++QRQ+A
Sbjct: 270 ILDAASRRNLEIDVNLAGDYRHTLAWVMDKSATAMGSRMLRRWLNRPLRSQEEVRQRQNA 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I LL+ E + +K + D ER+L
Sbjct: 330 IKELLEDYQF-EALHETLKQIGDSERIL 356
>gi|386314591|ref|YP_006010756.1| DNA mismatch repair protein MutS [Shewanella putrefaciens 200]
gi|319427216|gb|ADV55290.1| DNA mismatch repair protein MutS [Shewanella putrefaciens 200]
Length = 856
Score = 70.1 bits (170), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ GC VPA+ + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL
Sbjct: 635 TLMAHIGCFVPAERAVIGPIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATAQSLV 694
Query: 152 LVDEL 156
L+DE+
Sbjct: 695 LMDEI 699
Score = 44.3 bits (103), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 48/88 (54%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N + TL LD+ T+ G RML+ + +PL + + I RQ A
Sbjct: 270 VLDAATRRNLELTQNLAGGRDNTLATVLDNTATAMGSRMLQRWIHQPLRDPNQIIARQTA 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
++ LL + E + ++K L D+ER++
Sbjct: 330 VNELL-KTGTHEPLHEQLKALGDIERIM 356
>gi|421808544|ref|ZP_16244391.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC035]
gi|410415692|gb|EKP67477.1| DNA mismatch repair protein MutS [Acinetobacter baumannii OIFC035]
Length = 881
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYVPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 36.2 bits (82), Expect = 4.2, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYH-ESPVRMVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|423121843|ref|ZP_17109527.1| DNA mismatch repair protein mutS [Klebsiella oxytoca 10-5246]
gi|376393456|gb|EHT06113.1| DNA mismatch repair protein mutS [Klebsiella oxytoca 10-5246]
Length = 853
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPA+ + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL
Sbjct: 631 ALLAYIGSYVPAEKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 42.7 bits (99), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N + TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGFDNTLASVLDCTVTPMGSRMLKRWLHMPVRDTAVLVERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q+ TE ++ ++ + DLER+L
Sbjct: 328 IGAL--QERYTE-LQPVLRQVGDLERIL 352
>gi|297814117|ref|XP_002874942.1| hypothetical protein ARALYDRAFT_912022 [Arabidopsis lyrata subsp.
lyrata]
gi|297320779|gb|EFH51201.1| hypothetical protein ARALYDRAFT_912022 [Arabidopsis lyrata subsp.
lyrata]
Length = 1326
Score = 69.7 bits (169), Expect = 3e-10, Method: Composition-based stats.
Identities = 41/110 (37%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 1 ILDSTALANLHVLTNSDNTT-EGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ AL NL + NS N GTL QL+ CVT+ GKR+L+ L +PL N + IK+RQD
Sbjct: 699 VLDAAALENLEIFENSRNGGYSGTLYAQLNQCVTASGKRLLKTWLARPLYNPELIKERQD 758
Query: 60 AISVLLDQK-HITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTL 108
A+++L + + + R + L D+ER++ + F S + D + L
Sbjct: 759 AVAILRGENLPYSLEFRKALSRLPDMERLI-ARMFSSIEASGRNGDKVVL 807
Score = 63.9 bits (154), Expect = 2e-08, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 49/73 (67%)
Query: 84 LERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMR 143
L R + + L+ G VPA++ ++PVDRI RMGAKD++ QST+L EL+E+ ++
Sbjct: 1094 LLRQVCLAVILAQIGADVPAETFEVSPVDRICVRMGAKDHIMAGQSTFLTELSETAVMLT 1153
Query: 144 HASKYSLALVDEL 156
A++ SL ++DEL
Sbjct: 1154 SATRNSLVVLDEL 1166
>gi|385325085|ref|YP_005879524.1| DNA mismatch repair protein MutS [Neisseria meningitidis 8013]
gi|261393472|emb|CAX51118.1| DNA mismatch repair protein MutS [Neisseria meningitidis 8013]
Length = 864
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ P+D+IFTR+GA D+L+ +ST++ E++E+ I+ H ++ SL
Sbjct: 624 VLLAHTGCFVPADAATIGPIDQIFTRIGASDDLASNRSTFMVEMSETAYILHHDTEQSLV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 44/86 (51%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL+ LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKSPTLMSTLDLCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q + ++ ++K++ D+ER+
Sbjct: 325 AALESQ---YKPLQCRLKNIADIERI 347
>gi|171687199|ref|XP_001908540.1| hypothetical protein [Podospora anserina S mat+]
gi|170943561|emb|CAP69213.1| unnamed protein product [Podospora anserina S mat+]
Length = 1118
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA +TLTP D IFTRMGA+DNL +ST++ E++E+ +I+R A+ SL ++DEL
Sbjct: 910 GSYVPATEMTLTPCDAIFTRMGARDNLFAGESTFMVEVSETASILRSATPRSLVILDEL 968
Score = 41.2 bits (95), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 30/94 (31%), Positives = 53/94 (56%), Gaps = 8/94 (8%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+++ T L +L V NS D++ +G+L+ LD T G+R+LR + +PL + +++R
Sbjct: 523 LVNGTTLESLEVYRNSTDHSEKGSLMWALDKTQTRPGQRLLRKWIGRPLLDQQRLEERVT 582
Query: 60 AISVLLDQKHITE-----QMRAKMKDLRDLERML 88
A+ LL+++ + M A +K DLER L
Sbjct: 583 AVEELLEKQSAIQVSKLTGMLASIK--ADLERSL 614
>gi|68467217|ref|XP_722270.1| hypothetical protein CaO19.12411 [Candida albicans SC5314]
gi|68467446|ref|XP_722156.1| hypothetical protein CaO19.4945 [Candida albicans SC5314]
gi|46444105|gb|EAL03382.1| hypothetical protein CaO19.4945 [Candida albicans SC5314]
gi|46444229|gb|EAL03505.1| hypothetical protein CaO19.12411 [Candida albicans SC5314]
Length = 1214
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 46/63 (73%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
LS GC +PA+S LTPVDRI TR+GA DN+ +ST+ EL+E++ I+ +A+ SL ++
Sbjct: 986 LSQIGCYIPAESAELTPVDRIMTRLGANDNILQGKSTFFVELSETKKILSNATPRSLVIL 1045
Query: 154 DEL 156
DEL
Sbjct: 1046 DEL 1048
Score = 65.5 bits (158), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTN-SDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L NL +L N SD TT+GTL + ++ TSFGKR L+ ++ PL +D I QR D
Sbjct: 613 ILDGVTLNNLEILNNTSDGTTKGTLFKLVNRATTSFGKRQLQKWVLHPLFKVDEINQRYD 672
Query: 60 AISVLL-DQKHITEQMRAKMKDLRDLERML 88
++ L+ D + ++ + ++ DLER+L
Sbjct: 673 SVDYLMNDGLELRSILQDTLANIPDLERLL 702
>gi|13241484|gb|AAK16335.1| DNA mismatch repair protein MutS [Escherichia coli]
Length = 126
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/62 (45%), Positives = 47/62 (75%)
Query: 95 SFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVD 154
++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+D
Sbjct: 31 AYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVLMD 90
Query: 155 EL 156
E+
Sbjct: 91 EI 92
>gi|399894488|gb|AFP54330.1| methyl-directed mismatch repair protein, partial [Gilliamella
apicola]
Length = 842
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
LS+ G VPA + P+DRIFTR+GA D+L+ +ST++ E+TE+ IM +A++ SL
Sbjct: 626 VLLSYIGSFVPASKAVIGPIDRIFTRIGASDDLASGRSTFMVEMTETANIMHNATQQSLV 685
Query: 152 LVDEL 156
L+DE+
Sbjct: 686 LMDEI 690
Score = 54.7 bits (130), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N T+ T++E LD T G RML+ L P+ NL ++ RQ A
Sbjct: 263 VLDAATRRNLEITENLSGGTQNTVVEILDKTQTPMGSRMLKRWLHSPIRNLTILQNRQQA 322
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q +I E + +K + DLER+L
Sbjct: 323 IGEL--QNYINE-VNPLLKQIGDLERIL 347
>gi|392953193|ref|ZP_10318747.1| DNA mismatch repair protein MutS [Hydrocarboniphaga effusa AP103]
gi|391858708|gb|EIT69237.1| DNA mismatch repair protein MutS [Hydrocarboniphaga effusa AP103]
Length = 863
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPADS + PVDRIFTR+GA D+L+ QST++ E++E+ I+ +A++ SL
Sbjct: 636 VLLAHAGSFVPADSACIGPVDRIFTRIGAADDLASGQSTFMVEMSETANILHNATRCSLV 695
Query: 152 LVDEL 156
L+DE+
Sbjct: 696 LMDEV 700
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 48/91 (52%), Gaps = 3/91 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD NL + E +L+ D VT+ G R L L++PL + + + R DA
Sbjct: 267 ILDPATRRNLEIDRRLSGEFELSLLHVFDSNVTAMGSRELARWLLRPLRDRNELTGRFDA 326
Query: 61 ISVLLDQK---HITEQMRAKMKDLRDLERML 88
I+ LLD + + +R +++++ DLER+L
Sbjct: 327 IANLLDHERDNRLLSALRDRLRNVSDLERIL 357
>gi|358011983|ref|ZP_09143793.1| DNA mismatch repair protein MutS [Acinetobacter sp. P8-3-8]
Length = 881
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSFVPAKAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 36.6 bits (83), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 36/66 (54%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L ++ C T+ G R+L L++P+ + + R DAI L H +R +K++
Sbjct: 297 SLFHLINDCQTAMGGRLLARTLMQPIRDTHLLDARLDAIDAFLQGYH-ESPVRLVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|238878303|gb|EEQ41941.1| hypothetical protein CAWG_00132 [Candida albicans WO-1]
Length = 1214
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 46/63 (73%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
LS GC +PA+S LTPVDRI TR+GA DN+ +ST+ EL+E++ I+ +A+ SL ++
Sbjct: 986 LSQIGCYIPAESAELTPVDRIMTRLGANDNILQGKSTFFVELSETKKILSNATPRSLVIL 1045
Query: 154 DEL 156
DEL
Sbjct: 1046 DEL 1048
Score = 65.1 bits (157), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 55/90 (61%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTN-SDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L NL +L N SD TT+GTL + ++ TSFGKR L+ ++ PL +D I QR D
Sbjct: 613 ILDGVTLNNLEILNNTSDGTTKGTLFKLVNRATTSFGKRQLQKWVLHPLFKVDEINQRYD 672
Query: 60 AISVLL-DQKHITEQMRAKMKDLRDLERML 88
++ L+ D + ++ + ++ DLER+L
Sbjct: 673 SVDYLMNDGLELRSILQDTLANIPDLERLL 702
>gi|83647899|ref|YP_436334.1| DNA mismatch repair protein MutS [Hahella chejuensis KCTC 2396]
gi|83635942|gb|ABC31909.1| DNA mismatch repair protein MutS [Hahella chejuensis KCTC 2396]
Length = 882
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPA + + P+DR+FTRMG+ D+++G +ST++ E+TE+ I+ +A++ SL
Sbjct: 657 VILAYCGSFVPAAKVVIGPIDRVFTRMGSSDDIAGGRSTFMVEMTETANILHYATRQSLV 716
Query: 152 LVDEL 156
L+DE+
Sbjct: 717 LMDEV 721
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ + NL + N TL +D T+ G RMLR L +PL + + ++QRQ+A
Sbjct: 292 ILDAASRRNLEIDVNLAGDYRHTLAWVMDKSATAMGSRMLRRWLNRPLRSQEEVRQRQNA 351
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I LL+ E + +K + D ER+L
Sbjct: 352 IKELLEDYQF-EALHETLKQIGDSERIL 378
>gi|385872890|gb|AFI91410.1| DNA mismatch repair protein mutS [Pectobacterium sp. SCC3193]
Length = 854
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPAD + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL L+DE+
Sbjct: 639 GCFVPADLAVIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEI 697
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 43/139 (30%), Positives = 63/139 (45%), Gaps = 18/139 (12%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT+ G RML+ + P ++DA+KQRQ A
Sbjct: 270 IMDAATRRNLELTQNLSGGVENTLAAVLDCTVTAMGSRMLKRWIHMPSRDIDALKQRQQA 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLP---------------SSTFLSFQGCRVPADS 105
IS L + IT ++ ++ + DLER+L F F R
Sbjct: 330 ISAL---QEITPDLQPYLRQVGDLERILARLALRTARPRDLARMRHAFQQFPAIREQLSP 386
Query: 106 LTLTPVDRIFTRMGAKDNL 124
L V R+ +++G D L
Sbjct: 387 LEADSVRRLVSQIGQFDEL 405
>gi|410693675|ref|YP_003624296.1| DNA mismatch repair protein [Thiomonas sp. 3As]
gi|294340099|emb|CAZ88467.1| DNA mismatch repair protein [Thiomonas sp. 3As]
Length = 860
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPA S + P+D IFTR+GA D+L+G QST++ E+ E+ I+R A+ +SL
Sbjct: 630 ALLAYLGSYVPARSARIGPLDAIFTRIGASDDLAGGQSTFMVEMAETAAILRQATPHSLV 689
Query: 152 LVDEL 156
L+DE+
Sbjct: 690 LMDEV 694
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 26/86 (30%), Positives = 41/86 (47%), Gaps = 2/86 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ A NL +L TL+ LD C T+ G R+L L P + + + R A+
Sbjct: 267 LDAVARRNLEILQPLRGEDSPTLLSHLDSCQTAAGSRLLHDWLQAPPRDANVARARHAAL 326
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
L+D +R ++ + DLER+
Sbjct: 327 QALIDGD--LAALRGSLRGMADLERI 350
>gi|262278524|ref|ZP_06056309.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
gi|262258875|gb|EEY77608.1| conserved hypothetical protein [Acinetobacter calcoaceticus
RUH2202]
Length = 879
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G +PA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYIPAKAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 37.7 bits (86), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 28/99 (28%), Positives = 48/99 (48%), Gaps = 11/99 (11%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYH-ESPVRLVLKEIG 355
Query: 83 DLERML---------PSSTFLSFQGC-RVPADSLTLTPV 111
D+ER+L P C ++PA LTPV
Sbjct: 356 DIERVLSRVALGSARPRDLVQLRHACAQIPALRTALTPV 394
>gi|445416440|ref|ZP_21434512.1| DNA mismatch repair protein MutS [Acinetobacter sp. WC-743]
gi|444762180|gb|ELW86551.1| DNA mismatch repair protein MutS [Acinetobacter sp. WC-743]
Length = 884
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G VPA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSFVPAKAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 36.6 bits (83), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 37/66 (56%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L ++ C T+ G R+L L++P+ + + +R DA LL H +R +K++
Sbjct: 297 SLFSLINDCQTAMGSRLLARTLMQPIRDTQILDERLDATDTLLKGYH-EAPVRLVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|13241600|gb|AAK16393.1| DNA mismatch repair protein MutS [Escherichia coli]
Length = 126
Score = 69.7 bits (169), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 49/64 (76%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++AE+TE+ I+ +A+++SL L
Sbjct: 29 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMAEMTETANILHNATEHSLVL 88
Query: 153 VDEL 156
+DE+
Sbjct: 89 MDEI 92
>gi|317056655|ref|YP_004105122.1| DNA mismatch repair protein MutS [Ruminococcus albus 7]
gi|315448924|gb|ADU22488.1| DNA mismatch repair protein MutS [Ruminococcus albus 7]
Length = 871
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ GC VPAD ++ VD+IFTR+GA D+L+ QST++ E++E I++HA+K SL
Sbjct: 647 TLMAQIGCFVPADYAKISVVDQIFTRIGASDDLTAGQSTFMVEMSEVADIVKHATKNSLV 706
Query: 152 LVDEL 156
++DE+
Sbjct: 707 ILDEV 711
Score = 37.0 bits (84), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 37/68 (54%)
Query: 21 EGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKD 80
+G+L+ + + TS G RML++ L +PL N I R +A+ + ++R +
Sbjct: 299 KGSLLWVISNTKTSMGNRMLKSWLEQPLINPAKIIDRLNAVEQFVRDPVSLGEIREVLSG 358
Query: 81 LRDLERML 88
+ DLER++
Sbjct: 359 VYDLERLM 366
>gi|421746322|ref|ZP_16184127.1| DNA mismatch repair protein MutS [Cupriavidus necator HPC(L)]
gi|409775149|gb|EKN56670.1| DNA mismatch repair protein MutS [Cupriavidus necator HPC(L)]
Length = 499
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 47/64 (73%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L+ G VPA T+ P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ +A+ +SL L
Sbjct: 255 LLACVGAYVPARRATVGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHNATPHSLVL 314
Query: 153 VDEL 156
+DE+
Sbjct: 315 MDEI 318
>gi|327296443|ref|XP_003232916.1| DNA mismatch repair protein msh6 [Trichophyton rubrum CBS 118892]
gi|326465227|gb|EGD90680.1| DNA mismatch repair protein msh6 [Trichophyton rubrum CBS 118892]
Length = 1217
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM ++ ++ GC VP + LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A
Sbjct: 983 RMTCTAVIMAQIGCYVPCEYARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEA 1042
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1043 TSRSLVILDEL 1053
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL V N+ D ++EGTL + L+ CVT FGKR+ + + PL ++ I R D
Sbjct: 618 VLDGQTLINLEVFANTYDGSSEGTLFQLLNRCVTPFGKRLFKQWVCHPLMDIKKINARLD 677
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L + EQ +++ + DLER++
Sbjct: 678 AVESLNADSTVREQFSSQLTKMPDLERLI 706
>gi|403411535|emb|CCL98235.1| predicted protein [Fibroporia radiculosa]
Length = 1254
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 56/101 (55%), Gaps = 3/101 (2%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD LA++ VL NS+ T EG+L++QL C+T GKR+ R L PL + I R DA
Sbjct: 645 VLDGQTLAHIEVLLNSEGTEEGSLLKQLSRCITPSGKRLFRIWLCMPLREVSDITARLDA 704
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRV 101
+ LLD + K L DLER++ + + + C+V
Sbjct: 705 VQDLLDHPTFEQDFTKIAKGLPDLERVV---SRIHAKNCKV 742
Score = 55.5 bits (132), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 30/71 (42%), Positives = 41/71 (57%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + ++ G VPA L PVD I TRMGA DN+ + ST+ E+ E I+R A
Sbjct: 1014 RMTATGVIMAQLGMLVPARRARLCPVDSILTRMGAYDNMFSSASTFKVEMDECCKILRDA 1073
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1074 TPKSLVILDEL 1084
>gi|326477690|gb|EGE01700.1| DNA mismatch repair protein msh6 [Trichophyton equinum CBS 127.97]
Length = 1215
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM ++ ++ GC VP + LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A
Sbjct: 981 RMTCTAVIMAQIGCYVPCEYARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEA 1040
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1041 TPRSLVILDEL 1051
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + N+ D ++EGTL L+ CVT FGKR+ + + PL ++ I R D
Sbjct: 616 VLDGQTLINLEIFANTYDGSSEGTLFHLLNRCVTPFGKRLFKQWVCHPLMDIKKINARLD 675
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L + EQ +++ + DLER++
Sbjct: 676 AVESLNADSTVREQFSSQLTKMPDLERLI 704
>gi|326473228|gb|EGD97237.1| DNA mismatch repair protein Msh6 [Trichophyton tonsurans CBS 112818]
Length = 1215
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM ++ ++ GC VP + LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A
Sbjct: 981 RMTCTAVIMAQIGCYVPCEYARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEA 1040
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1041 TPRSLVILDEL 1051
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + N+ D ++EGTL L+ CVT FGKR+ + + PL ++ I R D
Sbjct: 616 VLDGQTLINLEIFANTYDGSSEGTLFHLLNRCVTPFGKRLFKQWVCHPLMDIKKINARLD 675
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L + EQ +++ + DLER++
Sbjct: 676 AVESLNADSTVREQFSSQLTKMPDLERLI 704
>gi|296136070|ref|YP_003643312.1| DNA mismatch repair protein MutS [Thiomonas intermedia K12]
gi|295796192|gb|ADG30982.1| DNA mismatch repair protein MutS [Thiomonas intermedia K12]
Length = 860
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPA S + P+D IFTR+GA D+L+G QST++ E+ E+ I+R A+ +SL
Sbjct: 630 ALLAYLGSYVPARSARIGPLDAIFTRIGASDDLAGGQSTFMVEMAETAAILRQATPHSLV 689
Query: 152 LVDEL 156
L+DE+
Sbjct: 690 LMDEV 694
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ A NL +L TL+ LD C T+ G R+LR L P + + ++R A+
Sbjct: 267 LDAVARRNLEILQPLRGEDSPTLLSHLDSCQTAAGSRLLRDWLQAPPRDANVARERHAAL 326
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
L+D +R ++ + DLER+
Sbjct: 327 QALIDGD--LAALRGSLRGMADLERI 350
>gi|13241594|gb|AAK16390.1| DNA mismatch repair protein MutS [Escherichia coli]
Length = 126
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 47/64 (73%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L +ST++ E+TE+ I+ +A++YSL L
Sbjct: 29 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLDSGRSTFMVEMTETANILHNATEYSLVL 88
Query: 153 VDEL 156
+DE+
Sbjct: 89 MDEI 92
>gi|261822576|ref|YP_003260682.1| DNA mismatch repair protein MutS [Pectobacterium wasabiae WPP163]
gi|261606589|gb|ACX89075.1| DNA mismatch repair protein MutS [Pectobacterium wasabiae WPP163]
Length = 854
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPAD + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL L+DE+
Sbjct: 639 GCFVPADLAVIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVLMDEI 697
Score = 58.2 bits (139), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT+ G RML+ + P ++DA+KQRQ A
Sbjct: 270 IMDAATRRNLELTQNLSGGVENTLAAVLDCTVTAMGSRMLKRWIHMPSRDIDALKQRQQA 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
IS L + IT ++ ++ + DLER+L
Sbjct: 330 ISAL---QEITPDLQPYLRQVGDLERIL 354
>gi|302502899|ref|XP_003013410.1| hypothetical protein ARB_00228 [Arthroderma benhamiae CBS 112371]
gi|291176974|gb|EFE32770.1| hypothetical protein ARB_00228 [Arthroderma benhamiae CBS 112371]
Length = 1217
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM ++ ++ GC VP + LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A
Sbjct: 983 RMTCTAVIMAQIGCYVPCEYARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEA 1042
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1043 TPRSLVILDEL 1053
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + N+ D ++EGTL + L+ CVT FGKR+ + + PL ++ I R D
Sbjct: 618 VLDGQTLINLEIFANTYDGSSEGTLFQLLNRCVTPFGKRLFKQWVCHPLMDIKKINARLD 677
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L + EQ +++ + DLER++
Sbjct: 678 AVESLNADSTVREQFSSQLTKMPDLERLI 706
>gi|194289312|ref|YP_002005219.1| DNA mismatch repair protein muts [Cupriavidus taiwanensis LMG
19424]
gi|193223147|emb|CAQ69152.1| methyl-directed mismatch repair protein [Cupriavidus taiwanensis
LMG 19424]
Length = 876
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ HA+ SL
Sbjct: 625 VLLACVGAYVPARRAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAGILHHATPASLV 684
Query: 152 LVDEL 156
L+DE+
Sbjct: 685 LMDEI 689
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 26/66 (39%), Positives = 31/66 (46%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LDS NL + TL LD C T+ G R LR L PL + + RQ AI
Sbjct: 258 LDSATRRNLELTETLRGGESPTLFSLLDTCCTAMGSRALRHWLHHPLRDPAVPQARQQAI 317
Query: 62 SVLLDQ 67
VL+DQ
Sbjct: 318 GVLIDQ 323
>gi|188534814|ref|YP_001908611.1| DNA mismatch repair protein MutS [Erwinia tasmaniensis Et1/99]
gi|238690902|sp|B2VG22.1|MUTS_ERWT9 RecName: Full=DNA mismatch repair protein MutS
gi|188029856|emb|CAO97740.1| DNA mismatch repair protein [Erwinia tasmaniensis Et1/99]
Length = 853
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ G VPA+ + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL
Sbjct: 633 TLMAHIGSFVPAEQAIIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLV 692
Query: 152 LVDEL 156
L+DE+
Sbjct: 693 LMDEI 697
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N ++ TL LD VT G RML+ L PL N I RQ +
Sbjct: 270 IMDAATRRNLEITQNLAGGSDNTLASVLDKTVTPMGSRMLKRWLHMPLRNAQTIALRQQS 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D + + + ++ + DLER+L
Sbjct: 330 IRTLQD---LNDSLPPLLRQVGDLERIL 354
>gi|167384705|ref|XP_001737066.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900342|gb|EDR26686.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 934
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 34/96 (35%), Positives = 60/96 (62%), Gaps = 1/96 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQ-LVKPLTNLDAIKQRQD 59
I+D+ ++ NL + + EGTL+ +D+C T+FGKRMLR + L+KPL +++ I RQ+
Sbjct: 344 IVDAQSIVNLALFASKGKEVEGTLLHFVDNCFTAFGKRMLRERFLLKPLMDVNKILHRQE 403
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLS 95
+ L+ + +Q+ ++ + DLER+L T L+
Sbjct: 404 VVEFFLENNDLIDQIGTFLRVIPDLERLLSQCTSLT 439
Score = 51.6 bits (122), Expect = 1e-04, Method: Composition-based stats.
Identities = 25/73 (34%), Positives = 45/73 (61%)
Query: 84 LERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMR 143
L R + + ++ G R + +T++ VD IFTR+GA D++ ST++ EL E+ ++
Sbjct: 733 LLRTVCLAVIMAQMGMRCTGEEITMSVVDHIFTRIGASDDILHGMSTFMVELDETAQMLH 792
Query: 144 HASKYSLALVDEL 156
A++ SL ++DEL
Sbjct: 793 DATQDSLVVLDEL 805
>gi|194099812|ref|YP_002002947.1| DNA mismatch repair protein MutS [Neisseria gonorrhoeae NCCP11945]
gi|238693214|sp|B4RPP9.1|MUTS_NEIG2 RecName: Full=DNA mismatch repair protein MutS
gi|193935102|gb|ACF30926.1| DNA mismatch repair protein [Neisseria gonorrhoeae NCCP11945]
Length = 864
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ PVD+IFTR+GA D+L+ +ST++ E++E+ I+ HA++ +
Sbjct: 624 VLLAHTGCFVPADAATIGPVDQIFTRIGASDDLASNRSTFMVEMSETAYILHHATEQIIV 683
Query: 152 LVDEL 156
L+DE+
Sbjct: 684 LMDEV 688
Score = 44.7 bits (104), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 27/86 (31%), Positives = 41/86 (47%), Gaps = 3/86 (3%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL LD C T G R+L L PL N I+ RQ+A+
Sbjct: 265 MDAATRRNLEITQTLSGKKTPTLFSILDGCATHMGSRLLALWLHHPLRNRAHIRARQEAV 324
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ L Q E ++ +K + D+ER+
Sbjct: 325 TALESQ---YEPLQCHLKSIADIERI 347
>gi|395243133|ref|ZP_10420120.1| DNA mismatch repair protein mutS [Lactobacillus hominis CRBIP
24.179]
gi|394484363|emb|CCI81128.1| DNA mismatch repair protein mutS [Lactobacillus hominis CRBIP
24.179]
Length = 860
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPADS TL D+IFTR+GA D+L QST++ E++E+ ++HA+K SL L DE+
Sbjct: 631 GCFVPADSATLPIFDQIFTRIGAADDLISGQSTFMVEMSEANEALQHATKRSLVLFDEI 689
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/106 (31%), Positives = 52/106 (49%), Gaps = 3/106 (2%)
Query: 9 NLHVLTNSDNTTE-GTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQ 67
NL ++ N+ + G+L LD T+ G R+L++ + +PL + IK+RQD + L D
Sbjct: 263 NLELIKNAKTGKKMGSLFWLLDKTSTAMGGRLLKSWIERPLLSSSEIKKRQDMVQALFDD 322
Query: 68 KHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRV--PADSLTLTPV 111
E + +K + DLER+ F S + A SL PV
Sbjct: 323 YFTRENVIDSLKGVYDLERLTGRIAFGSVNAREMLQLAHSLAAVPV 368
>gi|307729270|ref|YP_003906494.1| DNA mismatch repair protein MutS [Burkholderia sp. CCGE1003]
gi|307583805|gb|ADN57203.1| DNA mismatch repair protein MutS [Burkholderia sp. CCGE1003]
Length = 891
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 45/65 (69%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA PVDRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 649 TLLAYVGSYVPARRAAFGPVDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLV 708
Query: 152 LVDEL 156
L+DE+
Sbjct: 709 LMDEI 713
Score = 41.2 bits (95), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD NL + T TL LD C T+ G R+LR L P + + RQ A+
Sbjct: 281 LDPATRRNLEITQTLRGTESPTLCSLLDTCCTTMGSRLLRHWLHHPPRDPVHAQSRQQAV 340
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LL+ + +R ++ + D+ER+
Sbjct: 341 GALLEAPAGADVDALRGALRHISDIERI 368
>gi|422023418|ref|ZP_16369923.1| DNA mismatch repair protein MutS [Providencia sneebia DSM 19967]
gi|414094186|gb|EKT55856.1| DNA mismatch repair protein MutS [Providencia sneebia DSM 19967]
Length = 853
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL
Sbjct: 631 TLLAYIGSFVPATKAIIGPVDRIFTRVGASDDLASGRSTFMVEMTETANILHNATEHSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 54.3 bits (129), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N T+ TL LD CVT G RML+ L PL ++ + RQ A
Sbjct: 268 ILDAATRRNLEITQNLSGGTDNTLAAILDLCVTPMGSRMLKRWLHTPLRHIQTLTNRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I+ L ++ ++++ ++ + DLER+L
Sbjct: 328 IAAL---QNCGDELQPFLRQIGDLERVL 352
>gi|384083305|ref|ZP_09994480.1| DNA mismatch repair protein MutS [gamma proteobacterium HIMB30]
Length = 860
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L+ G VPAD ++ PVDRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 632 TLLARIGSFVPADHASVGPVDRIFTRIGASDDLAGGRSTFMVEMTETAAILAEATDQSLV 691
Query: 152 LVDEL 156
L+DE+
Sbjct: 692 LMDEV 696
Score = 35.4 bits (80), Expect = 8.7, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 40/88 (45%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD T NL ++ + TL+ LD T+ G R L + P + QR
Sbjct: 265 VLDQTTQKNLELIRTLKGERKHTLLWVLDRTSTAMGSRELTRWITAPYREITIPNQRLTH 324
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L+D IT + +K + DLER++
Sbjct: 325 IRELIDSGLIT-AITCHLKRIGDLERIV 351
>gi|229896461|ref|ZP_04511629.1| DNA mismatch repair protein MutS [Yersinia pestis Pestoides A]
gi|229700535|gb|EEO88566.1| DNA mismatch repair protein MutS [Yersinia pestis Pestoides A]
Length = 567
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 347 VLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 406
Query: 152 LVDEL 156
L+DE+
Sbjct: 407 LMDEI 411
Score = 38.5 bits (88), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 34/61 (55%), Gaps = 3/61 (4%)
Query: 28 LDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLRDLERM 87
LD VT G RML+ L P+ ++ + RQ AI L D I +++ ++ + DLER+
Sbjct: 11 LDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQAIGGLQD---IAAELQTPLRQVGDLERI 67
Query: 88 L 88
L
Sbjct: 68 L 68
>gi|448298648|ref|ZP_21488676.1| DNA mismatch repair protein MutS [Natronorubrum tibetense GA33]
gi|445591318|gb|ELY45524.1| DNA mismatch repair protein MutS [Natronorubrum tibetense GA33]
Length = 911
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 49/71 (69%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
R + T L+ G VPA + LTP DRIFTR+GA D+++G +ST++ E+ E TI+R A
Sbjct: 673 RQVAQITLLAQVGSFVPARAARLTPADRIFTRVGASDDIAGGRSTFMVEMDELATILREA 732
Query: 146 SKYSLALVDEL 156
++SL L+DE+
Sbjct: 733 DEHSLVLLDEV 743
Score = 44.3 bits (103), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTNS--DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQ 58
+LD+ A+ +L + + E TL+ LD + G R LR + +PL D I+ R
Sbjct: 307 LLDAVAMRSLELFEPRAVEGREEATLVGVLDETACALGGRTLRDWIRRPLLEPDRIEARL 366
Query: 59 DAISVLLDQKHITEQMRAKMKDLRDLERML 88
DA+ L E + +++++ DLER++
Sbjct: 367 DAVEELTADLQTREPLHDRLRNVYDLERLI 396
>gi|336252228|ref|YP_004595335.1| DNA mismatch repair protein mutS [Halopiger xanaduensis SH-6]
gi|335336217|gb|AEH35456.1| DNA mismatch repair protein mutS [Halopiger xanaduensis SH-6]
Length = 930
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
R + L+ G VPA S LTPVDRIFTR+GA D+++G +ST++ E+ E TI+R A
Sbjct: 679 RQVAQIVLLAQVGSFVPAGSARLTPVDRIFTRVGASDDIAGGRSTFMVEMDELATILREA 738
Query: 146 SKYSLALVDEL 156
+ SL L+DE+
Sbjct: 739 DERSLVLLDEV 749
Score = 41.6 bits (96), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 46/90 (51%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLT--NSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQ 58
+LD+ AL +L + + TL+ LD ++ G R LR L +PL + I+ R
Sbjct: 304 LLDAVALRSLELFEPRTVHGRDDATLVGVLDETSSALGGRKLRDWLRRPLLEPERIEARL 363
Query: 59 DAISVLLDQKHITEQMRAKMKDLRDLERML 88
DA+ L E++ ++++ DLER++
Sbjct: 364 DAVEELTSAVQTREELHELLREVYDLERLI 393
>gi|339325302|ref|YP_004684995.1| DNA mismatch repair protein MutS [Cupriavidus necator N-1]
gi|338165459|gb|AEI76514.1| DNA mismatch repair protein MutS [Cupriavidus necator N-1]
Length = 876
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ HA+ SL
Sbjct: 625 VLLACVGAYVPARRAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAGILHHATPASLV 684
Query: 152 LVDEL 156
L+DE+
Sbjct: 685 LMDEI 689
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LDS NL + TL LD C T+ G R LR L PL + + RQ AI
Sbjct: 258 LDSATRRNLELTETLRGGESPTLFSLLDTCCTAMGSRALRHWLHHPLRDPALPQARQQAI 317
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
VL+DQ T+ +R ++ L D+ER+
Sbjct: 318 GVLIDQG--TDALRTALRRLADVERI 341
>gi|113867230|ref|YP_725719.1| DNA mismatch repair protein MutS [Ralstonia eutropha H16]
gi|123329387|sp|Q0KCC0.1|MUTS_CUPNH RecName: Full=DNA mismatch repair protein MutS
gi|113526006|emb|CAJ92351.1| DNA mismatch repair protein MutS [Ralstonia eutropha H16]
Length = 899
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 45/65 (69%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ HA+ SL
Sbjct: 648 VLLACVGAYVPARRAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAGILHHATPASLV 707
Query: 152 LVDEL 156
L+DE+
Sbjct: 708 LMDEI 712
Score = 49.7 bits (117), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 43/86 (50%), Gaps = 2/86 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LDS NL + TL LD C T+ G R LR L PL + + RQ AI
Sbjct: 281 LDSATRRNLELTETLRGGESPTLFSLLDTCCTAMGSRALRHWLHHPLRDPALPQARQQAI 340
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
VL+DQ T+ +R ++ L D+ER+
Sbjct: 341 GVLIDQG--TDALRTALRRLADVERI 364
>gi|27597156|dbj|BAC55150.1| ORF23 [Methylobacillus sp. 12S]
Length = 863
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPA + + VDRIFTR+GA D+L+G +ST++ E+TE+ I+ +A+++SL
Sbjct: 637 VLLAHCGCFVPAKAARIGQVDRIFTRIGASDDLAGGRSTFMVEMTETANILHNATEHSLV 696
Query: 152 LVDEL 156
L+DE+
Sbjct: 697 LLDEI 701
Score = 38.1 bits (87), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 25/86 (29%), Positives = 44/86 (51%), Gaps = 1/86 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
D+ + NL + + TL L+ C T+ G R+LR L PL + AI+ R +A+
Sbjct: 274 FDAASRRNLEIDQTLRGESAPTLYSLLNTCRTAMGARLLRQWLHHPLRDHAAIQARLEAV 333
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
+ LL + + R + ++ D+ER+
Sbjct: 334 AALLHGDAL-QAPRRLLNNIGDIERI 358
>gi|315051840|ref|XP_003175294.1| DNA mismatch repair protein msh6 [Arthroderma gypseum CBS 118893]
gi|311340609|gb|EFQ99811.1| DNA mismatch repair protein msh6 [Arthroderma gypseum CBS 118893]
Length = 1211
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM ++ ++ GC VP + LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A
Sbjct: 981 RMTCTAVIMAQIGCYVPCEYARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEA 1040
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1041 TPRSLVILDEL 1051
Score = 67.0 bits (162), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 51/89 (57%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + N+ D ++EGTL + L+ CVT FGKR+ + + PL + I R D
Sbjct: 616 VLDGQTLINLEIFANTYDGSSEGTLFQLLNRCVTPFGKRLFKQWVCHPLMDTTKINARLD 675
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L + EQ +++ + DLER++
Sbjct: 676 AVESLNADSTVREQFSSQLTKMPDLERLI 704
>gi|397659621|ref|YP_006500323.1| DNA mismatch repair protein MutS [Klebsiella oxytoca E718]
gi|394347757|gb|AFN33878.1| DNA mismatch repair protein MutS [Klebsiella oxytoca E718]
Length = 841
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPA+ + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL
Sbjct: 619 ALLAYIGSYVPAEKVDIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLV 678
Query: 152 LVDEL 156
L+DE+
Sbjct: 679 LMDEI 683
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N + TL LD VT G RML+ L P + + +RQ
Sbjct: 256 IMDAATRRNLEITQNLAGGFDNTLASVLDCTVTPMGSRMLKRWLHMPARDTAVLVERQQT 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q+H TE ++ ++ + DLER+L
Sbjct: 316 IGAL--QEHYTE-LQPVLRQVGDLERIL 340
>gi|253999524|ref|YP_003051587.1| DNA mismatch repair protein MutS [Methylovorus glucosetrophus
SIP3-4]
gi|253986203|gb|ACT51060.1| DNA mismatch repair protein MutS [Methylovorus glucosetrophus
SIP3-4]
Length = 859
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPA + + VDRIFTR+GA D+L+G +ST++ E+TE+ I+ +A+++SL
Sbjct: 637 VLLAHCGCFVPAKAARIGQVDRIFTRIGASDDLAGGRSTFMVEMTETANILHNATEHSLV 696
Query: 152 LVDEL 156
L+DE+
Sbjct: 697 LLDEI 701
Score = 38.9 bits (89), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 29/90 (32%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 2 LDSTALANLHVLTNSDNTTEG----TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQR 57
D+ + NL + D T G TL L+ C T+ G R+LR L PL + AI+ R
Sbjct: 274 FDAASRRNLEI----DQTLRGEPAPTLYSLLNTCRTAMGARLLRHWLHHPLRDHAAIQAR 329
Query: 58 QDAISVLLDQKHITEQMRAKMKDLRDLERM 87
+A++ LL Q + R + ++ D+ER+
Sbjct: 330 LEAVAALL-QGDALQAPRRLLNNIGDIERI 358
>gi|354544901|emb|CCE41626.1| hypothetical protein CPAR2_801760 [Candida parapsilosis]
Length = 1244
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 91 STFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSL 150
+ LS GC +PA S LTPVDRI TR+GA DN+ +ST+ EL+E++ I+ +A+ SL
Sbjct: 1012 AVILSQIGCYIPASSAKLTPVDRIMTRLGANDNIMQGKSTFFVELSETKKILSNATPRSL 1071
Query: 151 ALVDEL 156
++DEL
Sbjct: 1072 VILDEL 1077
Score = 58.5 bits (140), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 33/93 (35%), Positives = 54/93 (58%), Gaps = 8/93 (8%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L+NL +L N+ D +GTL++ ++ T FGKR L+ ++ PL +D I R D
Sbjct: 640 ILDGITLSNLEILNNNYDGGDQGTLLKLVNRATTPFGKRHLKKWILHPLMRIDEISSRYD 699
Query: 60 AISVLLDQKHITEQMRAKMKD----LRDLERML 88
+I L+ ++R+ ++D L DLER++
Sbjct: 700 SIDYLMSD---GSELRSTLQDCLTALPDLERLI 729
>gi|344940515|ref|ZP_08779803.1| DNA mismatch repair protein mutS [Methylobacter tundripaludum SV96]
gi|344261707|gb|EGW21978.1| DNA mismatch repair protein mutS [Methylobacter tundripaludum SV96]
Length = 856
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA SL PVD+IFTR+GA D+LS +ST++ E++E+ I+ +A+ SL L+DE+
Sbjct: 641 GCYVPAKSLACGPVDKIFTRIGASDDLSSGRSTFMVEMSETANILHNATSKSLILMDEI 699
Score = 37.4 bits (85), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 29/108 (26%), Positives = 55/108 (50%), Gaps = 5/108 (4%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+++ NL + + + TL LD T+ G R LR + +PL + D + R
Sbjct: 270 LLDASSRRNLELDFHPSGQLQYTLFGVLDKTATAMGSRCLRRWINRPLRDHDILNNRYAC 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTL 108
I LL+ + +++ ++ + D+ER+ S+ ++ + R P D L L
Sbjct: 330 IDTLLNVL-LYRDIQSHLRQVGDIERI---SSRIALKSAR-PRDLLVL 372
>gi|145480193|ref|XP_001426119.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393192|emb|CAK58721.1| unnamed protein product [Paramecium tetraurelia]
Length = 1103
Score = 69.7 bits (169), Expect = 4e-10, Method: Composition-based stats.
Identities = 35/73 (47%), Positives = 48/73 (65%)
Query: 84 LERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMR 143
L R++ S L+ GC VPA S TLTP DRIF R+GA D L +ST+ EL E++TI+
Sbjct: 905 LLRLIGVSIILAQIGCAVPAQSFTLTPFDRIFCRLGATDRLLEGKSTFFIELEETKTILD 964
Query: 144 HASKYSLALVDEL 156
+ + SL ++DEL
Sbjct: 965 NCTSRSLVIIDEL 977
Score = 46.6 bits (109), Expect = 0.003, Method: Composition-based stats.
Identities = 28/90 (31%), Positives = 47/90 (52%), Gaps = 3/90 (3%)
Query: 2 LDSTALANLHVLT---NSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQ 58
LDS AL +L + + TT G+L + L+ C T+ KR+L + PL N I +RQ
Sbjct: 520 LDSQALESLEIFNVNLQTKITTAGSLFDYLNRCATAPAKRLLTKWVQSPLQNYKLIIERQ 579
Query: 59 DAISVLLDQKHITEQMRAKMKDLRDLERML 88
+ + L + + + ++K L D+ER +
Sbjct: 580 ECVQELTNLIPKCAEFQRRIKSLPDIERAI 609
>gi|423104531|ref|ZP_17092233.1| DNA mismatch repair protein mutS [Klebsiella oxytoca 10-5242]
gi|376382494|gb|EHS95227.1| DNA mismatch repair protein mutS [Klebsiella oxytoca 10-5242]
Length = 853
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPA+ + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL
Sbjct: 631 ALLAYIGSYVPAEKVDIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N + TL LD VT G RML+ L P + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGFDNTLASVLDCTVTPMGSRMLKRWLHMPARDTAVLVERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q+H TE ++ ++ + DLER+L
Sbjct: 328 IGAL--QEHYTE-LQPVLRQVGDLERIL 352
>gi|302657967|ref|XP_003020694.1| hypothetical protein TRV_05220 [Trichophyton verrucosum HKI 0517]
gi|291184551|gb|EFE40076.1| hypothetical protein TRV_05220 [Trichophyton verrucosum HKI 0517]
Length = 1217
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM ++ ++ GC VP + LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A
Sbjct: 983 RMTCTAVIMAQIGCYVPCEYARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEA 1042
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1043 TPRSLVILDEL 1053
Score = 68.6 bits (166), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + N+ D ++EGTL + L+ CVT FGKR+ + + PL ++ I R D
Sbjct: 618 VLDGQTLINLEIFANTYDGSSEGTLFQLLNRCVTPFGKRLFKQWVCHPLMDIKKINARLD 677
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L + EQ +++ + DLER++
Sbjct: 678 AVESLNADSTVREQFSSQLTKMPDLERLI 706
>gi|114320641|ref|YP_742324.1| DNA mismatch repair protein MutS [Alkalilimnicola ehrlichii MLHE-1]
gi|122311686|sp|Q0A8K3.1|MUTS_ALHEH RecName: Full=DNA mismatch repair protein MutS
gi|114227035|gb|ABI56834.1| DNA mismatch repair protein MutS [Alkalilimnicola ehrlichii MLHE-1]
Length = 878
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ G VPA + +L PVDRIFTR+GA D+L+G +ST++ E+TE+ I+ +A+ SL
Sbjct: 635 TLMAHIGSFVPARAASLGPVDRIFTRIGASDDLAGGRSTFMVEMTETANILHNATAQSLV 694
Query: 152 LVDEL 156
L+DE+
Sbjct: 695 LMDEI 699
Score = 53.5 bits (127), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D+ + NL + N TE TL LD V + G R+LR L +PL + ++ R A
Sbjct: 270 VIDAASRRNLELERNLSGGTEHTLASVLDSTVNAMGSRLLRRWLNRPLRDRTTLQARHQA 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ +L+ + +TE +R +++ + D+ER+L
Sbjct: 330 VEILMAES-LTEALRRQLRGISDVERIL 356
>gi|90408946|ref|ZP_01217080.1| DNA mismatch repair protein [Psychromonas sp. CNPT3]
gi|90309947|gb|EAS38098.1| DNA mismatch repair protein [Psychromonas sp. CNPT3]
Length = 852
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G +PA S T+ PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+K SL L+DE+
Sbjct: 640 GSFIPAQSATIGPVDRIFTRIGASDDLASGRSTFMVEMTETANILHNATKNSLVLMDEI 698
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N T+ TL + LD VT G R+L+ + +P+ N++ + RQ
Sbjct: 269 ILDAATRKNLELTQNLSGGTDHTLAQILDVSVTPMGSRLLKRWIHQPIRNVNILNYRQTM 328
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L+D + + +K + D+ER++
Sbjct: 329 IQTLIDLD-LCNALAEPLKQIGDIERVI 355
>gi|448400241|ref|ZP_21571308.1| DNA mismatch repair protein MutS [Haloterrigena limicola JCM 13563]
gi|445667781|gb|ELZ20421.1| DNA mismatch repair protein MutS [Haloterrigena limicola JCM 13563]
Length = 908
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 53/164 (32%), Positives = 79/164 (48%), Gaps = 21/164 (12%)
Query: 4 STALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI-- 61
+ ALANL L + T+ Q D+C +R R LV +D R +
Sbjct: 577 ADALANLDALVSL-----ATVAAQYDYCRPDLLEREGRDGLV-----IDIEGGRHPVVER 626
Query: 62 ---SVLLDQKHITEQMR------AKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVD 112
S + + H+ + R M R + L+ G VPA + LTPVD
Sbjct: 627 TQESFVPNDAHLRPERRLAVITGPNMSGKSTYMRQVAQIVLLAQIGSFVPARAAKLTPVD 686
Query: 113 RIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
RIFTR+GA D+++G +ST++ E+ E TI+R A + SL L+DE+
Sbjct: 687 RIFTRVGASDDIAGGRSTFMVEMDELATILRDADEGSLVLLDEV 730
Score = 43.1 bits (100), Expect = 0.043, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLT--NSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQ 58
+LD+ AL +L + + TLI +D ++ G R LR L +PL I+ R
Sbjct: 294 LLDAVALRSLELFEPRTVHGRDDATLIGVIDETASALGGRRLRDWLRRPLLEPARIEARH 353
Query: 59 DAISVLLDQKHITEQMRAKMKDLRDLERML 88
DA++ L E++ +++++ DLER++
Sbjct: 354 DAVAELKAAVQRREELHERLREVYDLERLI 383
>gi|448508881|ref|XP_003866016.1| Msh6 protein [Candida orthopsilosis Co 90-125]
gi|380350354|emb|CCG20576.1| Msh6 protein [Candida orthopsilosis Co 90-125]
Length = 1242
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 46/66 (69%)
Query: 91 STFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSL 150
+ LS GC +PA S LTPVDRI TR+GA DN+ +ST+ EL+E++ I+ +A+ SL
Sbjct: 1010 AVILSQIGCYIPASSARLTPVDRIMTRLGANDNIMQGKSTFFVELSETKKILSNATPKSL 1069
Query: 151 ALVDEL 156
++DEL
Sbjct: 1070 VILDEL 1075
Score = 60.5 bits (145), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 8/93 (8%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L NL +L N+ D +GTL++ ++ T FGKR L+ ++ PL +D I R D
Sbjct: 638 ILDGITLGNLEILNNNYDGGDQGTLLKLVNRATTPFGKRHLKKWILHPLMRIDEINLRYD 697
Query: 60 AISVLLDQKHITEQMRAKMKD----LRDLERML 88
+I L+D+ ++R+ ++D L DLER++
Sbjct: 698 SIDYLMDE---GSELRSILQDCLTSLPDLERLI 727
>gi|421727536|ref|ZP_16166697.1| DNA mismatch repair protein MutS [Klebsiella oxytoca M5al]
gi|410371712|gb|EKP26432.1| DNA mismatch repair protein MutS [Klebsiella oxytoca M5al]
Length = 853
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPA+ + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL
Sbjct: 631 ALLAYIGSYVPAEKVDIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 46.6 bits (109), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGFENTLASVLDCTVTPMGSRMLKRWLHMPARDTAVLVERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q+H TE ++ ++ + DLER+L
Sbjct: 328 IGAL--QEHYTE-LQPVLRQVGDLERIL 352
>gi|391335569|ref|XP_003742162.1| PREDICTED: DNA mismatch repair protein Msh6-like [Metaseiulus
occidentalis]
Length = 1146
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 69/122 (56%), Gaps = 1/122 (0%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+DS AL NL + NS T+EG+LI ++ C T+FG R L+ L+ P + I+ R DA
Sbjct: 561 IMDSVALTNLEIFENSVGTSEGSLISTINFCSTAFGLRHLKKWLLGPSCVSEEIESRWDA 620
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGA 120
+ L++ + + ++ ++K L D+++ML LS + P DS + D ++++
Sbjct: 621 VGELMENFSLLKTLQERLKKLPDMDKMLARIHSLSLKKTDHP-DSRAILYSDDVYSKRKI 679
Query: 121 KD 122
+D
Sbjct: 680 ED 681
Score = 65.9 bits (159), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 28/59 (47%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA+ + + VDRIFTR+GA D+++ +ST+L E+ E+ + +HA+K+SL L+DEL
Sbjct: 974 GAWVPAEEMEFSLVDRIFTRLGASDHITLGESTFLVEMLETSAVFKHATKHSLVLLDEL 1032
>gi|375257011|ref|YP_005016181.1| DNA mismatch repair protein MutS [Klebsiella oxytoca KCTC 1686]
gi|365906489|gb|AEX01942.1| DNA mismatch repair protein MutS [Klebsiella oxytoca KCTC 1686]
Length = 853
Score = 69.7 bits (169), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPA+ + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL
Sbjct: 631 ALLAYIGSYVPAEKVDIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N + TL LD VT G RML+ L P + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGCFDNTLASVLDCTVTPMGSRMLKRWLHMPARDTAVLVERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q+H TE ++ ++ + DLER+L
Sbjct: 328 IGAL--QEHYTE-LQPVLRQVGDLERIL 352
>gi|423125445|ref|ZP_17113124.1| DNA mismatch repair protein mutS [Klebsiella oxytoca 10-5250]
gi|376399051|gb|EHT11672.1| DNA mismatch repair protein mutS [Klebsiella oxytoca 10-5250]
Length = 853
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 49/65 (75%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPA+ + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL
Sbjct: 631 ALLAYIGSYVPAEKVDIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGFENTLASVLDCTVTPMGSRMLKRWLHMPARDTTVLVERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q+H TE ++ ++ + DLER+L
Sbjct: 328 IGAL--QEHYTE-LQPVLRQVGDLERIL 352
>gi|422349355|ref|ZP_16430246.1| DNA mismatch repair protein MutS [Sutterella wadsworthensis
2_1_59BFAA]
gi|404658437|gb|EKB31311.1| DNA mismatch repair protein MutS [Sutterella wadsworthensis
2_1_59BFAA]
Length = 886
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA+S+T+ PVDRI TR+GA D+L+ +ST++ E+TE+ I+ A+ SL
Sbjct: 642 TLLAWAGSFVPAESVTIGPVDRIHTRIGASDDLARGRSTFMVEMTEAAAILHQATDRSLV 701
Query: 152 LVDEL 156
L+DE+
Sbjct: 702 LMDEI 706
Score = 48.5 bits (114), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEG-TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
I+D + NL + + G TL LD C TS G R LR L PLT D + R D
Sbjct: 276 IIDPASRRNLEISDTIRSEGRGPTLFSVLDRCGTSMGSRELRRWLNLPLTKADEARGRHD 335
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERM 87
A+ L + + + + +++ L D+ER+
Sbjct: 336 ALEALAEDQDFSSFVERRLQGLPDIERI 363
>gi|254360921|ref|ZP_04977067.1| DNA mismatch repair protein MutS [Mannheimia haemolytica PHL213]
gi|452743855|ref|ZP_21943711.1| DNA mismatch repair protein MutS [Mannheimia haemolytica serotype 6
str. H23]
gi|153092400|gb|EDN73463.1| DNA mismatch repair protein MutS [Mannheimia haemolytica PHL213]
gi|452088069|gb|EME04436.1| DNA mismatch repair protein MutS [Mannheimia haemolytica serotype 6
str. H23]
Length = 865
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPA+S + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 630 TLMAYIGSFVPAESAEIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATENSLV 689
Query: 152 LVDEL 156
L+DE+
Sbjct: 690 LIDEI 694
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N TE TL LD CVT G R+L+ + +P+ + ++ RQ A
Sbjct: 266 LLDAATRRNLELTQNLAGGTENTLAAVLDKCVTPMGSRLLKRWIHQPIRDCGKLQARQKA 325
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I+ L+ + +++ ++ ++ + D+ER+L
Sbjct: 326 ITALIQYERMSD-LQPLLQQVGDMERIL 352
>gi|108808780|ref|YP_652696.1| DNA mismatch repair protein MutS [Yersinia pestis Antiqua]
gi|167398361|ref|ZP_02303885.1| DNA mismatch repair protein MutS [Yersinia pestis biovar Antiqua
str. UG05-0454]
gi|123072648|sp|Q1C471.1|MUTS_YERPA RecName: Full=DNA mismatch repair protein MutS
gi|108780693|gb|ABG14751.1| DNA mismatch repair protein MutS [Yersinia pestis Antiqua]
gi|167050865|gb|EDR62273.1| DNA mismatch repair protein MutS [Yersinia pestis biovar Antiqua
str. UG05-0454]
Length = 854
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L P+ ++ + RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D I +++ ++ + DLER+L
Sbjct: 328 IGGLQD---IAAELQTPLRQVGDLERIL 352
>gi|21951842|gb|AAM82367.1| mismatch repair protein MutS [Salmonella enterica]
Length = 376
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA S+ + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL L
Sbjct: 166 LLAYIGSYVPAQSVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVL 225
Query: 153 VDEL 156
+DE+
Sbjct: 226 MDEI 229
>gi|261493851|ref|ZP_05990363.1| DNA mismatch repair protein MutS [Mannheimia haemolytica serotype
A2 str. BOVINE]
gi|261495117|ref|ZP_05991581.1| DNA mismatch repair protein MutS [Mannheimia haemolytica serotype
A2 str. OVINE]
gi|261309187|gb|EEY10426.1| DNA mismatch repair protein MutS [Mannheimia haemolytica serotype
A2 str. OVINE]
gi|261310453|gb|EEY11644.1| DNA mismatch repair protein MutS [Mannheimia haemolytica serotype
A2 str. BOVINE]
Length = 865
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T +++ G VPA+S + P+DRIFTR+GA D+L+ +ST++ E+TE I+ A++ SL
Sbjct: 630 TLMAYIGSFVPAESAEIGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQATENSLV 689
Query: 152 LVDEL 156
L+DE+
Sbjct: 690 LIDEI 694
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N TE TL LD CVT G R+L+ + +P+ + ++ RQ A
Sbjct: 266 LLDAATRRNLELTQNLAGGTENTLAAVLDKCVTPMGSRLLKRWIHQPIRDCGKLQARQKA 325
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I+ L+ + +++ ++ ++ + D+ER+L
Sbjct: 326 ITALIQYERMSD-LQPLLQQVGDMERIL 352
>gi|241662693|ref|YP_002981053.1| DNA mismatch repair protein MutS [Ralstonia pickettii 12D]
gi|240864720|gb|ACS62381.1| DNA mismatch repair protein MutS [Ralstonia pickettii 12D]
Length = 882
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPA+ + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 646 VLLAYVGAFVPAEVAVIGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILHRATPNSLV 705
Query: 152 LVDEL 156
L+DE+
Sbjct: 706 LMDEI 710
Score = 47.8 bits (112), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/86 (37%), Positives = 42/86 (48%), Gaps = 2/86 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + TL LD C TS G R+LR L PL + + RQ AI
Sbjct: 283 LDTATRRNLELTETLRGQESPTLFSLLDTCATSMGSRLLRHWLHHPLRDRAVPQARQQAI 342
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERM 87
VLL T +RA ++ L D+ER+
Sbjct: 343 EVLLGSDWQT--LRATLRTLSDVERI 366
>gi|89889528|ref|ZP_01201039.1| DNA mismatch repair ATPase MutS [Flavobacteria bacterium BBFL7]
gi|89517801|gb|EAS20457.1| DNA mismatch repair ATPase MutS [Flavobacteria bacterium BBFL7]
Length = 867
Score = 69.3 bits (168), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 51/152 (33%), Positives = 75/152 (49%), Gaps = 20/152 (13%)
Query: 24 LIEQLDHCVTSFGKRMLRAQLVKP-LTNLDAIK---QRQDAISVLL-------------- 65
LI QLD C+ SF +++ V+P L DA++ R I +L
Sbjct: 548 LIGQLD-CLLSFASHAIQSNYVRPQLLEGDALEIKEGRHPVIEKMLPADKPYIPNDVLLD 606
Query: 66 -DQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNL 124
DQ+ I M + R LS G VPA + + VD+IFTR+GA DN+
Sbjct: 607 QDQQQIIMITGPNMSGKSAILRQTALIVLLSQMGSFVPASEVKMGIVDKIFTRVGASDNI 666
Query: 125 SGAQSTYLAELTESETIMRHASKYSLALVDEL 156
S +ST++ E+ ES +I+ + SK SL L+DE+
Sbjct: 667 SQGESTFMTEMNESASILNNISKGSLVLLDEI 698
Score = 44.7 bits (104), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/66 (31%), Positives = 36/66 (54%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
TLI+ +D T+ G RML+ L PL N + I++R D + + ++ + K +
Sbjct: 287 TLIDVIDQTTTAMGGRMLKRWLAFPLKNKEQIEKRHDIVEFFTNSSETLNAIKLEFKRMS 346
Query: 83 DLERML 88
DLER++
Sbjct: 347 DLERLV 352
>gi|449544351|gb|EMD35324.1| hypothetical protein CERSUDRAFT_124668 [Ceriporiopsis subvermispora
B]
Length = 1305
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD LA++ VL N++ T EG+L++ L C+T GKR+ R L PL N+ I R DA
Sbjct: 693 VLDGQTLAHVEVLMNNEGTEEGSLLKLLGRCITPSGKRLFRIWLCMPLRNVSDINARLDA 752
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRV 101
+ LL+ ++ + K L DLER++ + + + C+V
Sbjct: 753 VQDLLNHPSFEQEFTSVAKGLPDLERIV---SRIHAKNCKV 790
Score = 56.6 bits (135), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 40/71 (56%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + ++ G VPA S L PVD I TRMGA DN+ ST+ EL E I+R A
Sbjct: 1062 RMTATGIIMAQMGMLVPAKSARLCPVDSILTRMGAYDNMFSNASTFKVELDECCKILRDA 1121
Query: 146 SKYSLALVDEL 156
+ S ++DEL
Sbjct: 1122 TPKSFVILDEL 1132
>gi|294505062|ref|YP_003569124.1| DNA mismatch repair protein MutS [Yersinia pestis Z176003]
gi|384123526|ref|YP_005506146.1| DNA mismatch repair protein MutS [Yersinia pestis D106004]
gi|384127388|ref|YP_005510002.1| DNA mismatch repair protein MutS [Yersinia pestis D182038]
gi|262363122|gb|ACY59843.1| DNA mismatch repair protein MutS [Yersinia pestis D106004]
gi|262367052|gb|ACY63609.1| DNA mismatch repair protein MutS [Yersinia pestis D182038]
gi|294355521|gb|ADE65862.1| DNA mismatch repair protein MutS [Yersinia pestis Z176003]
Length = 819
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 599 VLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 658
Query: 152 LVDEL 156
L+DE+
Sbjct: 659 LMDEI 663
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L P+ ++ + RQ A
Sbjct: 236 IMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQA 295
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D I +++ ++ + DLER+L
Sbjct: 296 IGGLQD---IAAELQTPLRQVGDLERIL 320
>gi|21951840|gb|AAM82366.1| mismatch repair protein MutS [Salmonella enterica]
Length = 376
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA S+ + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL L
Sbjct: 166 LLAYIGSYVPAQSVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVL 225
Query: 153 VDEL 156
+DE+
Sbjct: 226 MDEI 229
>gi|420569836|ref|ZP_15065324.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-05]
gi|420759257|ref|ZP_15233599.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-66]
gi|420829963|ref|ZP_15296888.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-99]
gi|391439104|gb|EIQ99793.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-05]
gi|391628375|gb|EIS68460.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-66]
gi|391716846|gb|EIT47265.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-99]
Length = 784
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L P+ ++ + RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D I +++ ++ + DLER+L
Sbjct: 328 IGGLQD---IAAELQTPLRQVGDLERIL 352
>gi|420548444|ref|ZP_15046252.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-01]
gi|420748028|ref|ZP_15224095.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-64]
gi|391422949|gb|EIQ85481.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-01]
gi|391614010|gb|EIS55916.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-64]
Length = 782
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L P+ ++ + RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D I +++ ++ + DLER+L
Sbjct: 328 IGGLQD---IAAELQTPLRQVGDLERIL 352
>gi|327350733|gb|EGE79590.1| DNA mismatch repair protein msh6 [Ajellomyces dermatitidis ATCC
18188]
Length = 1244
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 48/71 (67%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM ++ ++ GC VP S LTPVDR+ +R+GA DN+ +QST+ EL+E++ I+ A
Sbjct: 1010 RMTCTAVIMAQIGCHVPCKSARLTPVDRVMSRLGANDNIFASQSTFFVELSETKKILSEA 1069
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1070 TPRSLVILDEL 1080
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + +NS D EGTL + L+ C T FGKRM + + PL + I R D
Sbjct: 645 VLDGQTLINLEIFSNSFDGGQEGTLFQLLNRCTTPFGKRMFKQWVCHPLMDTKKINARLD 704
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L + I Q +++ + DLER++
Sbjct: 705 AVDALNADRSIQNQFSSQLTKMPDLERLI 733
>gi|51595128|ref|YP_069319.1| DNA mismatch repair protein MutS [Yersinia pseudotuberculosis IP
32953]
gi|153948692|ref|YP_001402249.1| DNA mismatch repair protein MutS [Yersinia pseudotuberculosis IP
31758]
gi|186894140|ref|YP_001871252.1| DNA mismatch repair protein MutS [Yersinia pseudotuberculosis
PB1/+]
gi|81691882|sp|Q66EB5.1|MUTS_YERPS RecName: Full=DNA mismatch repair protein MutS
gi|167012385|sp|A7FLX1.1|MUTS_YERP3 RecName: Full=DNA mismatch repair protein MutS
gi|238691399|sp|B2K584.1|MUTS_YERPB RecName: Full=DNA mismatch repair protein MutS
gi|51588410|emb|CAH20018.1| methyl-directed mismatch repair, recognize exocyclic adducts of
guanosine [Yersinia pseudotuberculosis IP 32953]
gi|152960187|gb|ABS47648.1| DNA mismatch repair protein MutS [Yersinia pseudotuberculosis IP
31758]
gi|186697166|gb|ACC87795.1| DNA mismatch repair protein MutS [Yersinia pseudotuberculosis
PB1/+]
Length = 851
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L P+ ++ + RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D I +++ ++ + DLER+L
Sbjct: 328 IGGLQD---IAAELQTPLRQVGDLERIL 352
>gi|422013118|ref|ZP_16359747.1| DNA mismatch repair protein MutS [Providencia burhodogranariea DSM
19968]
gi|414103982|gb|EKT65555.1| DNA mismatch repair protein MutS [Providencia burhodogranariea DSM
19968]
Length = 853
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL
Sbjct: 631 TLLAYIGSFVPATKAVIGPIDRIFTRVGASDDLASGRSTFMVEMTETANILHNATEHSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 47/88 (53%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N T+ TL LD CVT G RML+ L PL ++ + RQ A
Sbjct: 268 ILDAATRRNLEITQNLSGGTDNTLASILDLCVTPMGSRMLKRWLHTPLRHIQTLNNRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I+ L + +++ ++ + DLER+L
Sbjct: 328 IAAL---QECGFELQPFLRQIGDLERVL 352
>gi|421656807|ref|ZP_16097104.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Naval-72]
gi|408503800|gb|EKK05553.1| DNA mismatch repair protein MutS [Acinetobacter baumannii Naval-72]
Length = 881
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+ L++ G +PA + L P+DRIFTR+G+ D+LS +ST++ E+TE+ I+ HA+ SL
Sbjct: 644 SLLAYCGSYIPARAAKLGPIDRIFTRIGSADDLSTGKSTFMVEMTETSQILHHATNQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEV 708
Score = 36.2 bits (82), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 20/66 (30%), Positives = 38/66 (57%), Gaps = 1/66 (1%)
Query: 23 TLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKDLR 82
+L + ++ C T+ G R+L L++P+ + + R DAI L+ H +R +K++
Sbjct: 297 SLFQLVNDCQTAMGGRLLSRTLMQPVRDTALLDARLDAIEQLIQGYH-ESPVRLVLKEIG 355
Query: 83 DLERML 88
D+ER+L
Sbjct: 356 DIERVL 361
>gi|22124746|ref|NP_668169.1| DNA mismatch repair protein MutS [Yersinia pestis KIM10+]
gi|45440190|ref|NP_991729.1| DNA mismatch repair protein MutS [Yersinia pestis biovar Microtus
str. 91001]
gi|108810904|ref|YP_646671.1| DNA mismatch repair protein MutS [Yersinia pestis Nepal516]
gi|145600263|ref|YP_001164339.1| DNA mismatch repair protein MutS [Yersinia pestis Pestoides F]
gi|153997602|ref|ZP_02022702.1| DNA mismatch repair protein MutS [Yersinia pestis CA88-4125]
gi|162418943|ref|YP_001605520.1| DNA mismatch repair protein MutS [Yersinia pestis Angola]
gi|165925876|ref|ZP_02221708.1| DNA mismatch repair protein MutS [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165936708|ref|ZP_02225275.1| DNA mismatch repair protein MutS [Yersinia pestis biovar Orientalis
str. IP275]
gi|166010151|ref|ZP_02231049.1| DNA mismatch repair protein MutS [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166212949|ref|ZP_02238984.1| DNA mismatch repair protein MutS [Yersinia pestis biovar Antiqua
str. B42003004]
gi|167421538|ref|ZP_02313291.1| DNA mismatch repair protein MutS [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167423797|ref|ZP_02315550.1| DNA mismatch repair protein MutS [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|167469363|ref|ZP_02334067.1| DNA mismatch repair protein MutS [Yersinia pestis FV-1]
gi|218930372|ref|YP_002348247.1| DNA mismatch repair protein MutS [Yersinia pestis CO92]
gi|229838980|ref|ZP_04459139.1| methyl-directed mismatch repair protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|229899547|ref|ZP_04514688.1| methyl-directed mismatch repair protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229901117|ref|ZP_04516240.1| methyl-directed mismatch repair protein [Yersinia pestis Nepal516]
gi|270489296|ref|ZP_06206370.1| DNA mismatch repair protein MutS [Yersinia pestis KIM D27]
gi|384138801|ref|YP_005521503.1| DNA mismatch repair protein MutS [Yersinia pestis A1122]
gi|384416045|ref|YP_005625407.1| methyl-directed mismatch repair protein [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|420553799|ref|ZP_15051033.1| DNA mismatch repair protein MutS [Yersinia pestis PY-02]
gi|420580777|ref|ZP_15075245.1| DNA mismatch repair protein MutS [Yersinia pestis PY-07]
gi|420586168|ref|ZP_15080129.1| DNA mismatch repair protein MutS [Yersinia pestis PY-08]
gi|420607752|ref|ZP_15099513.1| DNA mismatch repair protein MutS [Yersinia pestis PY-12]
gi|420618531|ref|ZP_15109036.1| DNA mismatch repair protein MutS [Yersinia pestis PY-14]
gi|420634031|ref|ZP_15123014.1| DNA mismatch repair protein MutS [Yersinia pestis PY-19]
gi|420644681|ref|ZP_15132669.1| DNA mismatch repair protein MutS [Yersinia pestis PY-29]
gi|420671263|ref|ZP_15156630.1| DNA mismatch repair protein MutS [Yersinia pestis PY-45]
gi|420678182|ref|ZP_15162916.1| DNA mismatch repair protein MutS [Yersinia pestis PY-47]
gi|420687592|ref|ZP_15171336.1| DNA mismatch repair protein MutS [Yersinia pestis PY-48]
gi|420692807|ref|ZP_15175910.1| DNA mismatch repair protein MutS [Yersinia pestis PY-52]
gi|420698568|ref|ZP_15180978.1| DNA mismatch repair protein MutS [Yersinia pestis PY-53]
gi|420704441|ref|ZP_15185637.1| DNA mismatch repair protein MutS [Yersinia pestis PY-54]
gi|420720747|ref|ZP_15199963.1| DNA mismatch repair protein MutS [Yersinia pestis PY-58]
gi|420732814|ref|ZP_15210713.1| DNA mismatch repair protein MutS [Yersinia pestis PY-61]
gi|420738300|ref|ZP_15215660.1| DNA mismatch repair protein MutS [Yersinia pestis PY-63]
gi|420764491|ref|ZP_15238212.1| DNA mismatch repair protein MutS [Yersinia pestis PY-71]
gi|420769733|ref|ZP_15242915.1| DNA mismatch repair protein MutS [Yersinia pestis PY-72]
gi|420774709|ref|ZP_15247423.1| DNA mismatch repair protein MutS [Yersinia pestis PY-76]
gi|420787051|ref|ZP_15258247.1| DNA mismatch repair protein MutS [Yersinia pestis PY-90]
gi|420806996|ref|ZP_15276236.1| DNA mismatch repair protein MutS [Yersinia pestis PY-93]
gi|420817848|ref|ZP_15286012.1| DNA mismatch repair protein MutS [Yersinia pestis PY-95]
gi|420828265|ref|ZP_15295365.1| DNA mismatch repair protein MutS [Yersinia pestis PY-98]
gi|420838814|ref|ZP_15304896.1| DNA mismatch repair protein MutS [Yersinia pestis PY-100]
gi|420844011|ref|ZP_15309612.1| DNA mismatch repair protein MutS [Yersinia pestis PY-101]
gi|420849674|ref|ZP_15314695.1| DNA mismatch repair protein MutS [Yersinia pestis PY-102]
gi|420856494|ref|ZP_15320474.1| DNA mismatch repair protein MutS [Yersinia pestis PY-113]
gi|421764858|ref|ZP_16201646.1| DNA mismatch repair protein MutS [Yersinia pestis INS]
gi|25453131|sp|Q8ZBQ3.1|MUTS_YERPE RecName: Full=DNA mismatch repair protein MutS
gi|123246704|sp|Q1CLQ9.1|MUTS_YERPN RecName: Full=DNA mismatch repair protein MutS
gi|166232151|sp|A4TQ04.1|MUTS_YERPP RecName: Full=DNA mismatch repair protein MutS
gi|238687278|sp|A9R111.1|MUTS_YERPG RecName: Full=DNA mismatch repair protein MutS
gi|21957565|gb|AAM84420.1|AE013686_3 methyl-directed mismatch repair protein [Yersinia pestis KIM10+]
gi|45435046|gb|AAS60606.1| DNA mismatch repair protein MutS [Yersinia pestis biovar Microtus
str. 91001]
gi|108774552|gb|ABG17071.1| DNA mismatch repair protein MutS [Yersinia pestis Nepal516]
gi|115348983|emb|CAL21943.1| DNA mismatch repair protein MutS [Yersinia pestis CO92]
gi|145211959|gb|ABP41366.1| DNA mismatch repair protein MutS [Yersinia pestis Pestoides F]
gi|149289239|gb|EDM39319.1| DNA mismatch repair protein MutS [Yersinia pestis CA88-4125]
gi|162351758|gb|ABX85706.1| DNA mismatch repair protein MutS [Yersinia pestis Angola]
gi|165915357|gb|EDR33967.1| DNA mismatch repair protein MutS [Yersinia pestis biovar Orientalis
str. IP275]
gi|165922488|gb|EDR39665.1| DNA mismatch repair protein MutS [Yersinia pestis biovar Orientalis
str. F1991016]
gi|165991058|gb|EDR43359.1| DNA mismatch repair protein MutS [Yersinia pestis biovar Antiqua
str. E1979001]
gi|166205736|gb|EDR50216.1| DNA mismatch repair protein MutS [Yersinia pestis biovar Antiqua
str. B42003004]
gi|166960457|gb|EDR56478.1| DNA mismatch repair protein MutS [Yersinia pestis biovar Orientalis
str. MG05-1020]
gi|167057967|gb|EDR67713.1| DNA mismatch repair protein MutS [Yersinia pestis biovar
Mediaevalis str. K1973002]
gi|229681842|gb|EEO77935.1| methyl-directed mismatch repair protein [Yersinia pestis Nepal516]
gi|229687039|gb|EEO79114.1| methyl-directed mismatch repair protein [Yersinia pestis biovar
Orientalis str. India 195]
gi|229695346|gb|EEO85393.1| methyl-directed mismatch repair protein [Yersinia pestis biovar
Orientalis str. PEXU2]
gi|270337800|gb|EFA48577.1| DNA mismatch repair protein MutS [Yersinia pestis KIM D27]
gi|320016549|gb|ADW00121.1| methyl-directed mismatch repair protein [Yersinia pestis biovar
Medievalis str. Harbin 35]
gi|342853930|gb|AEL72483.1| DNA mismatch repair protein MutS [Yersinia pestis A1122]
gi|391423123|gb|EIQ85637.1| DNA mismatch repair protein MutS [Yersinia pestis PY-02]
gi|391454786|gb|EIR13958.1| DNA mismatch repair protein MutS [Yersinia pestis PY-07]
gi|391455627|gb|EIR14730.1| DNA mismatch repair protein MutS [Yersinia pestis PY-08]
gi|391473016|gb|EIR30428.1| DNA mismatch repair protein MutS [Yersinia pestis PY-12]
gi|391488065|gb|EIR43941.1| DNA mismatch repair protein MutS [Yersinia pestis PY-14]
gi|391502870|gb|EIR57122.1| DNA mismatch repair protein MutS [Yersinia pestis PY-19]
gi|391518653|gb|EIR71352.1| DNA mismatch repair protein MutS [Yersinia pestis PY-29]
gi|391538549|gb|EIR89347.1| DNA mismatch repair protein MutS [Yersinia pestis PY-45]
gi|391552130|gb|EIS01581.1| DNA mismatch repair protein MutS [Yersinia pestis PY-48]
gi|391563437|gb|EIS11751.1| DNA mismatch repair protein MutS [Yersinia pestis PY-47]
gi|391566494|gb|EIS14478.1| DNA mismatch repair protein MutS [Yersinia pestis PY-52]
gi|391567611|gb|EIS15454.1| DNA mismatch repair protein MutS [Yersinia pestis PY-53]
gi|391571802|gb|EIS19110.1| DNA mismatch repair protein MutS [Yersinia pestis PY-54]
gi|391593508|gb|EIS37802.1| DNA mismatch repair protein MutS [Yersinia pestis PY-58]
gi|391621605|gb|EIS62632.1| DNA mismatch repair protein MutS [Yersinia pestis PY-61]
gi|391622176|gb|EIS63137.1| DNA mismatch repair protein MutS [Yersinia pestis PY-63]
gi|391634802|gb|EIS74039.1| DNA mismatch repair protein MutS [Yersinia pestis PY-71]
gi|391636811|gb|EIS75808.1| DNA mismatch repair protein MutS [Yersinia pestis PY-72]
gi|391646990|gb|EIS84678.1| DNA mismatch repair protein MutS [Yersinia pestis PY-76]
gi|391670128|gb|EIT05201.1| DNA mismatch repair protein MutS [Yersinia pestis PY-90]
gi|391676880|gb|EIT11243.1| DNA mismatch repair protein MutS [Yersinia pestis PY-93]
gi|391690935|gb|EIT23908.1| DNA mismatch repair protein MutS [Yersinia pestis PY-95]
gi|391695270|gb|EIT27856.1| DNA mismatch repair protein MutS [Yersinia pestis PY-98]
gi|391710996|gb|EIT41998.1| DNA mismatch repair protein MutS [Yersinia pestis PY-100]
gi|391711816|gb|EIT42748.1| DNA mismatch repair protein MutS [Yersinia pestis PY-101]
gi|391723845|gb|EIT53482.1| DNA mismatch repair protein MutS [Yersinia pestis PY-102]
gi|391737841|gb|EIT65693.1| DNA mismatch repair protein MutS [Yersinia pestis PY-113]
gi|411174409|gb|EKS44442.1| DNA mismatch repair protein MutS [Yersinia pestis INS]
Length = 851
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L P+ ++ + RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D I +++ ++ + DLER+L
Sbjct: 328 IGGLQD---IAAELQTPLRQVGDLERIL 352
>gi|420676629|ref|ZP_15161513.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-46]
gi|420749400|ref|ZP_15225266.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-65]
gi|420785926|ref|ZP_15257258.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-89]
gi|391551559|gb|EIS01059.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-46]
gi|391632816|gb|EIS72307.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-65]
gi|391654800|gb|EIS91606.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-89]
Length = 783
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L P+ ++ + RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D I +++ ++ + DLER+L
Sbjct: 328 IGGLQD---IAAELQTPLRQVGDLERIL 352
>gi|167750508|ref|ZP_02422635.1| hypothetical protein EUBSIR_01484 [Eubacterium siraeum DSM 15702]
gi|167656434|gb|EDS00564.1| DNA mismatch repair protein MutS [Eubacterium siraeum DSM 15702]
Length = 870
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/59 (54%), Positives = 42/59 (71%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA L VDRIFTR+GA D+LS QST++ E+TE TI+ A+K SL ++DE+
Sbjct: 650 GCFVPASYARLGVVDRIFTRVGASDDLSAGQSTFMVEMTEVATILNEATKNSLVILDEI 708
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/68 (33%), Positives = 40/68 (58%)
Query: 21 EGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKD 80
+G+L+ LD TS G+R LR + +PLT+ AI +R DA+ L++ ++ +
Sbjct: 296 KGSLLWVLDKTDTSMGRRKLRQCIEQPLTDTAAIIRRHDAVEALINNSAALYDIKTDLAK 355
Query: 81 LRDLERML 88
+ DLER++
Sbjct: 356 VYDLERLM 363
>gi|420655608|ref|ZP_15142512.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-34]
gi|391520050|gb|EIR72634.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-34]
Length = 761
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L P+ ++ + RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D I +++ ++ + DLER+L
Sbjct: 328 IGGLQD---IAAELQTPLRQVGDLERIL 352
>gi|420591276|ref|ZP_15084723.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-09]
gi|420726211|ref|ZP_15204777.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-59]
gi|420812367|ref|ZP_15281054.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-94]
gi|391457643|gb|EIR16568.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-09]
gi|391597687|gb|EIS41492.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-59]
gi|391677988|gb|EIT12249.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-94]
Length = 715
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L P+ ++ + RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D I +++ ++ + DLER+L
Sbjct: 328 IGGLQD---IAAELQTPLRQVGDLERIL 352
>gi|326794019|ref|YP_004311839.1| DNA mismatch repair protein mutS [Marinomonas mediterranea MMB-1]
gi|326544783|gb|ADZ90003.1| DNA mismatch repair protein mutS [Marinomonas mediterranea MMB-1]
Length = 880
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/65 (49%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L+ G VPA +++ VDRIFTRMG+ D+L+G +ST++ E+TE+ I+ +ASK SL
Sbjct: 636 TLLAHTGSFVPAQKASISVVDRIFTRMGSSDDLAGGRSTFMVEMTETANILNNASKDSLV 695
Query: 152 LVDEL 156
L+DE+
Sbjct: 696 LMDEV 700
Score = 48.9 bits (115), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D NL + N T TL+ LD C T G R+L+ L P+ LD + QRQ A
Sbjct: 271 LIDGATRKNLEIDQNLTGTQTNTLVSVLDTCATPMGSRLLKRWLHTPIRQLDELHQRQSA 330
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ L + + + +K + DLER+L
Sbjct: 331 VKA-LKEGFGYDLLLPLLKQVGDLERIL 357
>gi|398409676|ref|XP_003856303.1| hypothetical protein MYCGRDRAFT_98500 [Zymoseptoria tritici IPO323]
gi|339476188|gb|EGP91279.1| hypothetical protein MYCGRDRAFT_98500 [Zymoseptoria tritici IPO323]
Length = 1199
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + L+ GC VP +S +TPVDRI +R+GA DN+ QST++ EL+E++ I+ A
Sbjct: 970 RMTCIAVILAQVGCYVPCESARMTPVDRIMSRLGAHDNIFAGQSTFMVELSETKKILSEA 1029
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1030 TPRSLVILDEL 1040
Score = 67.0 bits (162), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD +L NL + N+ D + EGTL L+ CVT FGKRMLR + PL + I R D
Sbjct: 603 VLDGQSLINLEIFANTFDGSAEGTLFSMLNRCVTPFGKRMLRQWVCHPLGDARKINLRFD 662
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L + ++ + + L DLER++
Sbjct: 663 AVDALNADGTVMDRFTSSLSRLPDLERLI 691
>gi|420656997|ref|ZP_15143769.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-36]
gi|391546417|gb|EIR96405.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-36]
Length = 763
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L P+ ++ + RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D I +++ ++ + DLER+L
Sbjct: 328 IGGLQD---IAAELQTPLRQVGDLERIL 352
>gi|420649994|ref|ZP_15137470.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-32]
gi|420823181|ref|ZP_15290795.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-96]
gi|391521011|gb|EIR73513.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-32]
gi|391693757|gb|EIT26478.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-96]
Length = 759
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L P+ ++ + RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D I +++ ++ + DLER+L
Sbjct: 328 IGGLQD---IAAELQTPLRQVGDLERIL 352
>gi|420639239|ref|ZP_15127704.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-25]
gi|391507900|gb|EIR61688.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-25]
Length = 780
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L P+ ++ + RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D I +++ ++ + DLER+L
Sbjct: 328 IGGLQD---IAAELQTPLRQVGDLERIL 352
>gi|420613132|ref|ZP_15104334.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-13]
gi|420624901|ref|ZP_15114779.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-16]
gi|420709749|ref|ZP_15190369.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-55]
gi|391486688|gb|EIR42702.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-13]
gi|391513710|gb|EIR66899.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-16]
gi|391580966|gb|EIS26899.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-55]
Length = 762
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L P+ ++ + RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D I +++ ++ + DLER+L
Sbjct: 328 IGGLQD---IAAELQTPLRQVGDLERIL 352
>gi|420564789|ref|ZP_15060740.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-04]
gi|391437943|gb|EIQ98750.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-04]
Length = 737
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L P+ ++ + RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D I +++ ++ + DLER+L
Sbjct: 328 IGGLQD---IAAELQTPLRQVGDLERIL 352
>gi|284165652|ref|YP_003403931.1| DNA mismatch repair protein MutS [Haloterrigena turkmenica DSM
5511]
gi|284015307|gb|ADB61258.1| DNA mismatch repair protein MutS [Haloterrigena turkmenica DSM
5511]
Length = 893
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/71 (47%), Positives = 48/71 (67%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
R + L+ G VPA S LTPVDRIFTR+GA D+++G +ST++ E+ E TI+R A
Sbjct: 650 RQVAQIVLLAQVGSFVPARSARLTPVDRIFTRVGASDDIAGGRSTFMVEMDELATILREA 709
Query: 146 SKYSLALVDEL 156
+ SL L+DE+
Sbjct: 710 DERSLVLLDEV 720
Score = 42.7 bits (99), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 25/90 (27%), Positives = 47/90 (52%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLT--NSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQ 58
+LD+ AL +L + + TL+ LD ++ G R LR + +PL I+ R
Sbjct: 284 LLDAVALRSLELFEPRTVHGRDDATLVGVLDETASALGGRKLRDWIRRPLLEPARIEARH 343
Query: 59 DAISVLLDQKHITEQMRAKMKDLRDLERML 88
DA++ L E++ +++++ DLER++
Sbjct: 344 DAVAELKSAVQTRERLHDRLREVYDLERLI 373
>gi|420147621|ref|ZP_14654896.1| DNA mismatch repair protein MutS [Lactobacillus gasseri CECT 5714]
gi|398400768|gb|EJN54299.1| DNA mismatch repair protein MutS [Lactobacillus gasseri CECT 5714]
Length = 857
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPADS TL D+IFTR+GA D+L QST++ E++E+ ++HA+K SL L DE+
Sbjct: 631 GCFVPADSATLPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQHATKRSLVLFDEI 689
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 2 LDSTALANLHVLTNSDNTTE-GTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+ T NL ++ ++ + + G+L LD T+ G R+L++ + +PL ++ I +RQ+
Sbjct: 256 MSHTVQTNLELIKSAKTSKKMGSLFWLLDKTSTAMGGRLLKSWIERPLLSVTEITRRQEM 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLS 95
+ LLD E++ +K + DLER+ F S
Sbjct: 316 VQALLDDYFTREKVIDSLKGVYDLERLTGRIAFGS 350
>gi|420623820|ref|ZP_15113810.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-15]
gi|391488328|gb|EIR44186.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-15]
Length = 784
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L P+ ++ + RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D I +++ ++ + DLER+L
Sbjct: 328 IGGLQD---IAAELQTPLRQVGDLERIL 352
>gi|420602318|ref|ZP_15094592.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-11]
gi|420727723|ref|ZP_15206117.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-60]
gi|391471889|gb|EIR29408.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-11]
gi|391606698|gb|EIS49399.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-60]
Length = 782
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L P+ ++ + RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D I +++ ++ + DLER+L
Sbjct: 328 IGGLQD---IAAELQTPLRQVGDLERIL 352
>gi|420855351|ref|ZP_15319492.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-103]
gi|391724441|gb|EIT54018.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-103]
Length = 765
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L P+ ++ + RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D I +++ ++ + DLER+L
Sbjct: 328 IGGLQD---IAAELQTPLRQVGDLERIL 352
>gi|420666409|ref|ZP_15152207.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-42]
gi|420715230|ref|ZP_15195238.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-56]
gi|391536109|gb|EIR87128.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-42]
gi|391583012|gb|EIS28717.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-56]
Length = 738
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L P+ ++ + RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D I +++ ++ + DLER+L
Sbjct: 328 IGGLQD---IAAELQTPLRQVGDLERIL 352
>gi|420575495|ref|ZP_15070443.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-06]
gi|420596640|ref|ZP_15089542.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-10]
gi|420792497|ref|ZP_15263161.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-91]
gi|391442854|gb|EIR03223.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-06]
gi|391470624|gb|EIR28274.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-10]
gi|391673375|gb|EIT08105.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-91]
Length = 781
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 48.9 bits (115), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L P+ ++ + RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D I +++ ++ + DLER+L
Sbjct: 328 IGGLQD---IAAELQTPLRQVGDLERIL 352
>gi|225556818|gb|EEH05106.1| DNA mismatch repair protein msh6 [Ajellomyces capsulatus G186AR]
Length = 1189
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%)
Query: 83 DLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIM 142
+ E + S ++ GC VP S LTPVDRI +R+GA DN+ +QST+ EL+E++ I+
Sbjct: 952 EFEELRHPSVIMAQIGCYVPCQSARLTPVDRIMSRLGANDNIFASQSTFFVELSETKKIL 1011
Query: 143 RHASKYSLALVDEL 156
A+ SL ++DEL
Sbjct: 1012 SEATPRSLVILDEL 1025
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + NS D EGTL L+ C+T FGKR+ + + PL + I R D
Sbjct: 633 VLDGQTLINLEIFANSFDGGQEGTLFHLLNRCITPFGKRLFKQWVCHPLMDTRKINSRLD 692
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L + Q +++ + DLER++
Sbjct: 693 AVDALNADSSVQNQFSSQLTKMPDLERLI 721
>gi|71282195|ref|YP_270792.1| DNA mismatch repair protein MutS [Colwellia psychrerythraea 34H]
gi|90109844|sp|Q47WN0.1|MUTS_COLP3 RecName: Full=DNA mismatch repair protein MutS
gi|71147935|gb|AAZ28408.1| DNA mismatch repair protein MutS [Colwellia psychrerythraea 34H]
Length = 872
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ GC VPAD+ T+ VDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL
Sbjct: 649 VLLAHIGCYVPADNATIGLVDRIFTRIGASDDLASGRSTFMVEMTETANILHNATDKSLV 708
Query: 152 LVDEL 156
L+DE+
Sbjct: 709 LLDEI 713
Score = 38.5 bits (88), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 45/90 (50%), Gaps = 5/90 (5%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N + TL LD T G R+L+ L PL +L + RQ+
Sbjct: 280 VLDAATRRNLELTQNLHGGLDNTLAAILDKSSTPMGSRLLKRWLHFPLRDLTVLNNRQNT 339
Query: 61 IS--VLLDQKHITEQMRAKMKDLRDLERML 88
+S + LD + ++ +K L D+ER++
Sbjct: 340 VSDIIALD---LIAPIQPLLKGLGDIERIV 366
>gi|407791032|ref|ZP_11138121.1| DNA mismatch repair protein MutS [Gallaecimonas xiamenensis 3-C-1]
gi|407201675|gb|EKE71672.1| DNA mismatch repair protein MutS [Gallaecimonas xiamenensis 3-C-1]
Length = 855
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/93 (40%), Positives = 54/93 (58%)
Query: 64 LLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDN 123
L D KH+ M R T ++ GC VPA S + VDRIFTR+GA D+
Sbjct: 607 LTDSKHMLMVTGPNMGGKSTYMRQTALITLMAHIGCPVPAQSAQIGLVDRIFTRIGAADD 666
Query: 124 LSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
L+ +ST++ E+TE+ TI+ +AS SL L+DE+
Sbjct: 667 LASGRSTFMVEMTETATILNNASDRSLVLMDEI 699
Score = 50.8 bits (120), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 47/88 (53%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + + +T+ TL LD C T G R+L L +PL ++ I R DA
Sbjct: 271 VLDAATRRNLELTQSLAGSTDNTLFSVLDRCATPMGSRLLGRWLHRPLRDIQVINGRLDA 330
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q+ + ++ MK + DLER++
Sbjct: 331 IDY-LGQQLLDASLKDLMKQVGDLERVM 357
>gi|420801649|ref|ZP_15271392.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-92]
gi|391677513|gb|EIT11813.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-92]
Length = 783
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L P+ ++ + RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D I +++ ++ + DLER+L
Sbjct: 328 IGGLQD---IAAELQTPLRQVGDLERIL 352
>gi|420780323|ref|ZP_15252363.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-88]
gi|391650351|gb|EIS87641.1| DNA mismatch repair protein MutS, partial [Yersinia pestis PY-88]
Length = 783
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD T+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHLGSYVPADQATIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 48.9 bits (115), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N +E TL LD VT G RML+ L P+ ++ + RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGSENTLAAILDCSVTPMGSRMLKRWLHMPIRDIRVLTDRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D I +++ ++ + DLER+L
Sbjct: 328 IGGLQD---IAAELQTPLRQVGDLERIL 352
>gi|260887307|ref|ZP_05898570.1| DNA mismatch repair protein MutS [Selenomonas sputigena ATCC 35185]
gi|330838939|ref|YP_004413519.1| DNA mismatch repair protein MutS [Selenomonas sputigena ATCC 35185]
gi|260862943|gb|EEX77443.1| DNA mismatch repair protein MutS [Selenomonas sputigena ATCC 35185]
gi|329746703|gb|AEC00060.1| DNA mismatch repair protein MutS [Selenomonas sputigena ATCC 35185]
Length = 861
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ G VPA +T +PVDRIFTR+GA D+L QST++ E+ E I+++A+K SL
Sbjct: 630 TLMAQSGSFVPAKEMTFSPVDRIFTRIGASDDLVSGQSTFMVEMNEVAQILKYATKDSLV 689
Query: 152 LVDEL 156
++DE+
Sbjct: 690 ILDEI 694
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTN-SDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL ++ N D + TL++ LD T+ G R+LR L PL + + I++R D
Sbjct: 261 VLDTYTLRNLEIIRNLRDGGKKDTLLDVLDFTKTAMGSRLLRKWLEYPLLSREKIERRLD 320
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
++ + E ++A +++ D ER+L
Sbjct: 321 GVAEFAADFSLREDVQAHCREIFDFERLL 349
>gi|116629083|ref|YP_814255.1| DNA mismatch repair protein MutS [Lactobacillus gasseri ATCC 33323]
gi|238853826|ref|ZP_04644191.1| DNA mismatch repair protein MutS [Lactobacillus gasseri 202-4]
gi|282852792|ref|ZP_06262134.1| DNA mismatch repair protein MutS [Lactobacillus gasseri 224-1]
gi|122273919|sp|Q045Q5.1|MUTS_LACGA RecName: Full=DNA mismatch repair protein MutS
gi|116094665|gb|ABJ59817.1| DNA mismatch repair protein MutS [Lactobacillus gasseri ATCC 33323]
gi|238833521|gb|EEQ25793.1| DNA mismatch repair protein MutS [Lactobacillus gasseri 202-4]
gi|282556534|gb|EFB62154.1| DNA mismatch repair protein MutS [Lactobacillus gasseri 224-1]
Length = 857
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPADS TL D+IFTR+GA D+L QST++ E++E+ ++HA+K SL L DE+
Sbjct: 631 GCFVPADSATLPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQHATKRSLVLFDEI 689
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 2 LDSTALANLHVLTNSDNTTE-GTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+ T NL ++ ++ + + G+L LD T+ G R+L++ + +PL ++ I +RQ+
Sbjct: 256 MSHTVQTNLELIKSAKTSKKMGSLFWLLDKTSTAMGGRLLKSWIERPLLSVTEITRRQEM 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLS 95
+ LLD E++ +K + DLER+ F S
Sbjct: 316 VQALLDDYFTREKVIDSLKGVYDLERLTGRIAFGS 350
>gi|381394660|ref|ZP_09920372.1| DNA mismatch repair protein MutS [Glaciecola punicea DSM 14233 =
ACAM 611]
gi|379329627|dbj|GAB55505.1| DNA mismatch repair protein MutS [Glaciecola punicea DSM 14233 =
ACAM 611]
Length = 902
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 46/64 (71%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ GC VPA + P+D+IFTR+GA D+L+ +ST++ E+TE+ IM +A+ SL L
Sbjct: 667 ILAYIGCFVPATEAKIGPIDQIFTRIGAADDLASGRSTFMVEMTETANIMHNATSNSLVL 726
Query: 153 VDEL 156
+DE+
Sbjct: 727 MDEI 730
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 26/88 (29%), Positives = 47/88 (53%), Gaps = 2/88 (2%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D+ NL + +T+ TL+ +DH T+ G R+L+ L +P T+ I R
Sbjct: 282 LMDAATQQNLELTRTLSGSTQHTLLAAIDHTSTNMGSRLLQRYLHRPTTSHHEIAHRHSL 341
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I+ LL + E+ + +K + D+ER+L
Sbjct: 342 INSLLGED--LEEFQDVLKQIGDVERIL 367
>gi|421909797|ref|ZP_16339601.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|421914484|ref|ZP_16344131.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
gi|410116318|emb|CCM82226.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae ST258-K26BO]
gi|410123240|emb|CCM86756.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae ST258-K28BO]
Length = 853
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 51/170 (30%), Positives = 86/170 (50%), Gaps = 37/170 (21%)
Query: 4 STALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISV 63
++ALA L VL N E L++C +F KP + + R + +
Sbjct: 546 ASALAELDVLVNLAERAE-----TLNYCCPTFSD--------KPGIRIS--EGRHPVVEL 590
Query: 64 LLDQKHITEQMRAKMKDLRDLERML----PS----STF---------LSFQGCRVPADSL 106
+L + I ++ L RML P+ ST+ L++ G VPA +
Sbjct: 591 VLKEPFIANPLQ-----LAPQRRMLIITGPNMGGKSTYMRQTALIALLAYIGSYVPAQKV 645
Query: 107 TLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
+ P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL L+DE+
Sbjct: 646 EIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVLMDEI 695
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N T+ TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGTDNTLASVLDCTVTPMGSRMLKRWLHMPVRDTAVLVERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q+ TE ++ ++ + DLER+L
Sbjct: 328 IGAL--QERYTE-LQPVLRQVGDLERIL 352
>gi|340000458|ref|YP_004731342.1| DNA mismatch repair protein [Salmonella bongori NCTC 12419]
gi|339513820|emb|CCC31578.1| DNA mismatch repair protein [Salmonella bongori NCTC 12419]
Length = 855
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA S+ + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL L
Sbjct: 634 LLAYIGSYVPAQSVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVL 693
Query: 153 VDEL 156
+DE+
Sbjct: 694 MDEI 697
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ N D +++RQ
Sbjct: 270 IMDAATRRNLEITQNLSGGVENTLAAVLDCTVTPMGSRMLKRWLHMPVRNTDILRERQQT 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D +++ ++ + DLER+L
Sbjct: 330 IGALQD---TVSELQPVLRQVGDLERIL 354
>gi|325087831|gb|EGC41141.1| DNA mismatch repair protein [Ajellomyces capsulatus H88]
Length = 1178
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%)
Query: 83 DLERMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIM 142
+ E + S ++ GC VP S LTPVDRI +R+GA DN+ +QST+ EL+E++ I+
Sbjct: 941 EFEELRHPSVIMAQIGCYVPCQSARLTPVDRIMSRLGANDNIFASQSTFFVELSETKKIL 1000
Query: 143 RHASKYSLALVDEL 156
A+ SL ++DEL
Sbjct: 1001 SEATPRSLVILDEL 1014
Score = 63.5 bits (153), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + NS D EGTL L+ C+T FGKR+ + + PL + I R D
Sbjct: 622 VLDGQTLINLEIFANSFDGGQEGTLFHLLNRCITPFGKRLFKQWVCHPLMDTRKINARLD 681
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L + Q +++ + DLER++
Sbjct: 682 AVDALNADSSVQNQFSSQLTKMPDLERLI 710
>gi|406916496|gb|EKD55508.1| hypothetical protein ACD_60C00004G0018 [uncultured bacterium]
Length = 850
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
LS+ G VPA + VDRIFTR+GA D+L+G +ST++ E+TE+ I+ HA++ SL
Sbjct: 631 VLLSYTGSFVPAREARIGHVDRIFTRIGASDDLAGGRSTFMVEMTETAAILHHATQDSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LLDEI 695
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 49/88 (55%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + TN N + TL LD+ ++ G R+L+ + +PL + +RQ++
Sbjct: 266 ILDAATRRNLELTTNLMNAPDNTLASVLDYTASAMGSRLLKRWIHRPLRQQSVLVERQES 325
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I LL +H ++ A +K D+ER+L
Sbjct: 326 IKNLLQGRHYF-KLHAILKQTDDVERIL 352
>gi|375110985|ref|ZP_09757199.1| DNA mismatch repair protein MutS [Alishewanella jeotgali KCTC
22429]
gi|374569017|gb|EHR40186.1| DNA mismatch repair protein MutS [Alishewanella jeotgali KCTC
22429]
Length = 853
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA+ + P+DRIFTR+GA D+L+ +ST++ E+TE+ TI+ HA+ SL L+DE+
Sbjct: 640 GSFVPAEQAVIGPIDRIFTRIGASDDLASGRSTFMVEMTETATILHHATAQSLVLMDEI 698
Score = 42.7 bits (99), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + + TE TL LD T+ G R+L+ + PL N + QR DA
Sbjct: 271 VLDAATRRNLELTHTLNGQTEHTLAAVLDKTQTAMGSRLLKRWIHAPLRNRTQLNQRLDA 330
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ L + + ++ +K + D+ER+L
Sbjct: 331 VQELTED---FQALQPSLKQIGDIERIL 355
>gi|170054869|ref|XP_001863325.1| DNA mismatch repair protein MSH6 [Culex quinquefasciatus]
gi|167875012|gb|EDS38395.1| DNA mismatch repair protein MSH6 [Culex quinquefasciatus]
Length = 1130
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G +PA+S LT +DRIFTR+GA D++ ST+L EL E+ TI++HA++ SL L+DEL
Sbjct: 930 GAPIPAESCRLTLIDRIFTRLGANDDIMAGHSTFLVELNETSTILKHATEKSLVLLDEL 988
Score = 62.8 bits (151), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 54/88 (61%), Gaps = 5/88 (5%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ L+NL LT+ E +L+ +LDHC T FGKR+L + P + I QRQDA
Sbjct: 528 VLDAITLSNLR-LTDG----ELSLLNRLDHCCTKFGKRLLHHWVCSPSCEREIIIQRQDA 582
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L++ ++ + +R + +L DLERML
Sbjct: 583 IKELVEDINLLQDVRQILGELPDLERML 610
>gi|393762777|ref|ZP_10351403.1| DNA mismatch repair protein MutS [Alishewanella agri BL06]
gi|392606399|gb|EIW89284.1| DNA mismatch repair protein MutS [Alishewanella agri BL06]
Length = 853
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA+ + P+DRIFTR+GA D+L+ +ST++ E+TE+ TI+ HA+ SL L+DE+
Sbjct: 640 GSFVPAEQAVIGPIDRIFTRIGASDDLASGRSTFMVEMTETATILHHATAQSLVLMDEI 698
Score = 42.0 bits (97), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + TE TL LD T+ G R+L+ + PL N + QR DA
Sbjct: 271 VLDAATRRNLELTHTLSGQTEHTLAAVLDKTQTAMGSRLLKRWIHAPLRNRTQLNQRLDA 330
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ L + + ++ +K + D+ER+L
Sbjct: 331 VQELTED---FQALQPSLKQIGDIERIL 355
>gi|325680315|ref|ZP_08159875.1| DNA mismatch repair protein MutS [Ruminococcus albus 8]
gi|324108024|gb|EGC02280.1| DNA mismatch repair protein MutS [Ruminococcus albus 8]
Length = 871
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ GC VPAD ++ VD+IFTR+GA D+L+ QST++ E++E I++HA+K SL
Sbjct: 647 TLMAQIGCFVPADYAKISVVDQIFTRIGASDDLTAGQSTFMVEMSEVADIVKHATKDSLV 706
Query: 152 LVDEL 156
++DE+
Sbjct: 707 ILDEV 711
Score = 37.4 bits (85), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 38/68 (55%)
Query: 21 EGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMRAKMKD 80
+G+L+ + + TS G RML++ L +PL N I R +A+ L+ +++ +
Sbjct: 299 KGSLLWVISNTKTSMGNRMLKSWLEQPLINPAKIIDRLNAVEQLVRDPVALGEIKEVLGG 358
Query: 81 LRDLERML 88
+ DLER++
Sbjct: 359 VYDLERLM 366
>gi|157148278|ref|YP_001455597.1| DNA mismatch repair protein MutS [Citrobacter koseri ATCC BAA-895]
gi|172045591|sp|A8ANU8.1|MUTS_CITK8 RecName: Full=DNA mismatch repair protein MutS
gi|157085483|gb|ABV15161.1| hypothetical protein CKO_04095 [Citrobacter koseri ATCC BAA-895]
Length = 853
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA S+ + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL L
Sbjct: 632 LLAYIGSYVPAQSVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 46.6 bits (109), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 57/134 (42%), Gaps = 18/134 (13%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N + TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGVDNTLASVLDCTVTPMGSRMLKRWLHMPVRDTKTLIERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLP---------------SSTFLSFQGCRVPADS 105
I L D +T +++ ++ + DLER+L F R ++
Sbjct: 328 IGALQD---VTSELQPVLRQVGDLERILARLALRTARPRDLARMRHAFQQLPELRAQLET 384
Query: 106 LTLTPVDRIFTRMG 119
+T PV + +MG
Sbjct: 385 VTSAPVQNLREKMG 398
>gi|354724914|ref|ZP_09039129.1| DNA mismatch repair protein MutS [Enterobacter mori LMG 25706]
Length = 853
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 49/64 (76%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA ++ + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL L
Sbjct: 632 LLAYIGSYVPAQNVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEV 695
Score = 43.9 bits (102), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 27/88 (30%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E T+ LD VT G RML+ L P+ + + + RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGVENTVASVLDSTVTPMGSRMLKRWLHMPIRDTNTLIGRQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I+ L D +++ ++ + DLER+L
Sbjct: 328 IAALQDS---YTELQPVLRQVGDLERIL 352
>gi|319943934|ref|ZP_08018214.1| DNA mismatch repair protein MutS [Lautropia mirabilis ATCC 51599]
gi|319742695|gb|EFV95102.1| DNA mismatch repair protein MutS [Lautropia mirabilis ATCC 51599]
Length = 914
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPA + + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A++ SL
Sbjct: 661 AILAWCGSFVPATACEVGPIDRIFTRIGASDDLAGGRSTFMVEMTEAAVIVNAATERSLV 720
Query: 152 LVDEL 156
LVDE+
Sbjct: 721 LVDEI 725
Score = 45.1 bits (105), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 47/87 (54%), Gaps = 1/87 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D A NL ++ TL+ ++D C T+ G R+LR L+ PL + A+ RQ
Sbjct: 286 IIDQVARRNLELVRPLQEEQGPTLLSRMDVCATAAGSRLLRQWLLAPLQDRTAVHARQAL 345
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERM 87
+++LL+ K + + + + D+ER+
Sbjct: 346 VALLLE-KDMAQPIGRLLSQAADIERI 371
>gi|226328643|ref|ZP_03804161.1| hypothetical protein PROPEN_02538 [Proteus penneri ATCC 35198]
gi|225203376|gb|EEG85730.1| MutS domain V protein [Proteus penneri ATCC 35198]
Length = 328
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA+ + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 106 TLLAYIGSFVPAEKALIGPVDRIFTRVGASDDLASGRSTFMVEMTETANILHNATENSLV 165
Query: 152 LVDEL 156
L+DE+
Sbjct: 166 LMDEI 170
>gi|440286421|ref|YP_007339186.1| DNA mismatch repair protein MutS [Enterobacteriaceae bacterium
strain FGI 57]
gi|440045943|gb|AGB77001.1| DNA mismatch repair protein MutS [Enterobacteriaceae bacterium
strain FGI 57]
Length = 855
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA S+ + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL L
Sbjct: 634 LLAYIGSYVPAQSVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATENSLVL 693
Query: 153 VDEL 156
+DE+
Sbjct: 694 MDEI 697
Score = 47.4 bits (111), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 270 IMDAATRRNLEITQNLGGGVENTLASVLDCTVTPMGSRMLKRWLHMPVRDTKTLTERQQT 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T +++ ++ + DLER+L
Sbjct: 330 IGALQDA---TGELQPVLRQVGDLERIL 354
>gi|402833102|ref|ZP_10881724.1| DNA mismatch repair protein MutS [Selenomonas sp. CM52]
gi|402281469|gb|EJU30104.1| DNA mismatch repair protein MutS [Selenomonas sp. CM52]
Length = 861
Score = 69.3 bits (168), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T ++ G VPA +T +PVDRIFTR+GA D+L QST++ E+ E I+++A+K SL
Sbjct: 630 TLMAQSGSFVPAKEMTFSPVDRIFTRIGASDDLVSGQSTFMVEMNEVAQILKYATKDSLV 689
Query: 152 LVDEL 156
++DE+
Sbjct: 690 ILDEI 694
Score = 50.1 bits (118), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTN-SDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL ++ N D + TL++ LD T+ G R+LR L PL + + I++R D
Sbjct: 261 VLDTYTLRNLEIIRNLRDGGKKDTLLDVLDFTKTAMGSRLLRKWLEYPLLSREKIERRLD 320
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
++ + E ++A +++ D ER+L
Sbjct: 321 GVAEFAADFSLREDVQAHCREIFDFERLL 349
>gi|401675070|ref|ZP_10807064.1| DNA mismatch repair protein MutS [Enterobacter sp. SST3]
gi|400217527|gb|EJO48419.1| DNA mismatch repair protein MutS [Enterobacter sp. SST3]
Length = 853
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 49/64 (76%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA ++ + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL L
Sbjct: 632 LLAYIGSYVPAQNVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEV 695
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 44/88 (50%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGVENTLASVLDSTVTPMGSRMLKRWLHMPIRDTATLVCRQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I+ L D+ +++ ++ + DLER+L
Sbjct: 328 IAALQDR---YTELQPVLRQVGDLERIL 352
>gi|424832075|ref|ZP_18256803.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
gi|414709514|emb|CCN31218.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae Ecl8]
Length = 850
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL L
Sbjct: 629 LLAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVL 688
Query: 153 VDEL 156
+DE+
Sbjct: 689 MDEI 692
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N T+ TL LD VT G RML+ L P+ + + +RQ
Sbjct: 265 IMDAATRRNLEITQNLAGGTDNTLASVLDCTVTPMGSRMLKRWLHMPVRDTAVLVERQQT 324
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q+ TE ++ ++ + DLER+L
Sbjct: 325 IGAL--QERYTE-LQPVLRQVGDLERIL 349
>gi|262041479|ref|ZP_06014678.1| DNA mismatch repair protein MutS, partial [Klebsiella pneumoniae
subsp. rhinoscleromatis ATCC 13884]
gi|259041174|gb|EEW42246.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
rhinoscleromatis ATCC 13884]
Length = 507
Score = 69.3 bits (168), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL
Sbjct: 285 ALLAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLV 344
Query: 152 LVDEL 156
L+DE+
Sbjct: 345 LMDEI 349
>gi|405123347|gb|AFR98112.1| DNA mismatch repair protein msh6 [Cryptococcus neoformans var.
grubii H99]
Length = 1213
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD L ++ VL N++ TEGTL E L CV+ GKR+ + L PL + DAI R DA
Sbjct: 599 ILDGKTLGHMEVLVNNEGGTEGTLAELLQRCVSPSGKRLFKVWLRSPLRDADAINARLDA 658
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+ L++ + K L DLER++
Sbjct: 659 VEDLMNHPRFSGDFTQLCKGLPDLERLI 686
Score = 65.1 bits (157), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 43/71 (60%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + ++ GC VPA L+PVD+I TRMGA DN+ + ST+ EL E I+R A
Sbjct: 966 RMTAAGVIMAQLGCYVPASEAKLSPVDKIQTRMGAYDNMFASASTFKVELDECSRILREA 1025
Query: 146 SKYSLALVDEL 156
SL ++DEL
Sbjct: 1026 GPKSLVILDEL 1036
>gi|154275572|ref|XP_001538637.1| hypothetical protein HCAG_06242 [Ajellomyces capsulatus NAm1]
gi|150415077|gb|EDN10439.1| hypothetical protein HCAG_06242 [Ajellomyces capsulatus NAm1]
Length = 1188
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM ++ ++ GC VP S LTPVDRI +R+GA DN+ +QST+ EL+E++ I+ A
Sbjct: 998 RMTCTAVIMAQIGCYVPCQSARLTPVDRIMSRLGANDNIFASQSTFFVELSETKKILFEA 1057
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1058 TPRSLVILDEL 1068
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 47/89 (52%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L NL + NS D EGTL L+ C+T FGKR+ + + PL + I R D
Sbjct: 633 VLDGQTLINLEIFANSFDGGQEGTLFHLLNRCITPFGKRLFKQWVCHPLMDTRKINARLD 692
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L + Q +++ + DLER++
Sbjct: 693 AVDALNADSSVQNQFSSQLTKMPDLERLI 721
>gi|428943669|ref|ZP_19016524.1| DNA mismatch repair protein MutS, partial [Klebsiella pneumoniae
VA360]
gi|426296272|gb|EKV58939.1| DNA mismatch repair protein MutS, partial [Klebsiella pneumoniae
VA360]
Length = 418
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL L
Sbjct: 197 LLAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVL 256
Query: 153 VDEL 156
+DE+
Sbjct: 257 MDEI 260
>gi|386036232|ref|YP_005956145.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae KCTC 2242]
gi|339763360|gb|AEJ99580.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae KCTC 2242]
Length = 853
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL L
Sbjct: 632 LLAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N T+ TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGTDNTLASVLDCTVTPMGSRMLKRWLHMPVRDTAVLVERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q+ TE ++ ++ + DLER+L
Sbjct: 328 IGAL--QERYTE-LQPVLRQVGDLERIL 352
>gi|288933852|ref|YP_003437911.1| DNA mismatch repair protein MutS [Klebsiella variicola At-22]
gi|288888581|gb|ADC56899.1| DNA mismatch repair protein MutS [Klebsiella variicola At-22]
Length = 853
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL L
Sbjct: 632 LLAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N T+ TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGTDNTLASVLDCTVTPMGSRMLKRWLHMPVRDTAVLVERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q+ TE ++ ++ + DLER+L
Sbjct: 328 IGAL--QERYTE-LQPVLRQVGDLERIL 352
>gi|254191438|ref|ZP_04897942.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei Pasteur
52237]
gi|157939110|gb|EDO94780.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei Pasteur
52237]
Length = 938
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 699 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNGATPHSLV 758
Query: 152 LVDEL 156
L+DE+
Sbjct: 759 LMDEI 763
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 331 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 390
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 391 GALLDAPPNAGLDSLRSALRQIADVERI 418
>gi|152971616|ref|YP_001336725.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238896212|ref|YP_002920948.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|330008216|ref|ZP_08306186.1| DNA mismatch repair protein MutS [Klebsiella sp. MS 92-3]
gi|365140089|ref|ZP_09346209.1| DNA mismatch repair protein mutS [Klebsiella sp. 4_1_44FAA]
gi|378980328|ref|YP_005228469.1| DNA mismatch repair protein [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|402779287|ref|YP_006634833.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|419972553|ref|ZP_14487981.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|419980231|ref|ZP_14495517.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|419983524|ref|ZP_14498674.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|419991190|ref|ZP_14506157.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|419997319|ref|ZP_14512116.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|420001119|ref|ZP_14515776.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|420008154|ref|ZP_14522645.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|420013681|ref|ZP_14527991.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|420019394|ref|ZP_14533587.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|420024886|ref|ZP_14538897.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|420029871|ref|ZP_14543699.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|420035600|ref|ZP_14549263.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|420042467|ref|ZP_14555960.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|420048108|ref|ZP_14561423.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|420053180|ref|ZP_14566359.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|420058718|ref|ZP_14571729.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|420065368|ref|ZP_14578174.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|420073190|ref|ZP_14585819.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|420075622|ref|ZP_14588097.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|420081473|ref|ZP_14593781.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|424932090|ref|ZP_18350462.1| DNA mismatch repair protein mutS 2 [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|425082900|ref|ZP_18485997.1| DNA mismatch repair protein mutS [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|425092998|ref|ZP_18496082.1| DNA mismatch repair protein mutS [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|428152460|ref|ZP_19000124.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|428936928|ref|ZP_19010286.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae JHCK1]
gi|449047506|ref|ZP_21730799.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae hvKP1]
gi|172052439|sp|A6TD24.1|MUTS_KLEP7 RecName: Full=DNA mismatch repair protein MutS
gi|150956465|gb|ABR78495.1| DNA mismatch repair protein [Klebsiella pneumoniae subsp.
pneumoniae MGH 78578]
gi|238548530|dbj|BAH64881.1| DNA mismatch repair protein [Klebsiella pneumoniae subsp.
pneumoniae NTUH-K2044]
gi|328535210|gb|EGF61708.1| DNA mismatch repair protein MutS [Klebsiella sp. MS 92-3]
gi|363653964|gb|EHL92908.1| DNA mismatch repair protein mutS [Klebsiella sp. 4_1_44FAA]
gi|364519739|gb|AEW62867.1| DNA mismatch repair protein [Klebsiella pneumoniae subsp.
pneumoniae HS11286]
gi|397346542|gb|EJJ39656.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH2]
gi|397350962|gb|EJJ44048.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH1]
gi|397355156|gb|EJJ48166.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH4]
gi|397363112|gb|EJJ55755.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH6]
gi|397364539|gb|EJJ57169.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH5]
gi|397372644|gb|EJJ65128.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH7]
gi|397379764|gb|EJJ71955.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH9]
gi|397383715|gb|EJJ75849.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH8]
gi|397389086|gb|EJJ81036.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH10]
gi|397398189|gb|EJJ89854.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH11]
gi|397402330|gb|EJJ93933.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH12]
gi|397407617|gb|EJJ99002.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH14]
gi|397416052|gb|EJK07231.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH17]
gi|397416269|gb|EJK07444.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH16]
gi|397424597|gb|EJK15495.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH18]
gi|397431805|gb|EJK22476.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH20]
gi|397436556|gb|EJK27142.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH19]
gi|397438166|gb|EJK28684.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH21]
gi|397448121|gb|EJK38300.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH22]
gi|397453238|gb|EJK43300.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae KPNIH23]
gi|402540229|gb|AFQ64378.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae 1084]
gi|405599219|gb|EKB72395.1| DNA mismatch repair protein mutS [Klebsiella pneumoniae subsp.
pneumoniae WGLW2]
gi|405611340|gb|EKB84108.1| DNA mismatch repair protein mutS [Klebsiella pneumoniae subsp.
pneumoniae WGLW5]
gi|407806277|gb|EKF77528.1| DNA mismatch repair protein mutS 2 [Klebsiella pneumoniae subsp.
pneumoniae KpQ3]
gi|426297326|gb|EKV59835.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae JHCK1]
gi|427537588|emb|CCM96262.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae ST512-K30BO]
gi|448877371|gb|EMB12337.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae hvKP1]
Length = 853
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL L
Sbjct: 632 LLAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N T+ TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGTDNTLASVLDCTVTPMGSRMLKRWLHMPVRDTAVLVERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q+ TE ++ ++ + DLER+L
Sbjct: 328 IGAL--QERYTE-LQPVLRQVGDLERIL 352
>gi|134277623|ref|ZP_01764338.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 305]
gi|134251273|gb|EBA51352.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 305]
Length = 894
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 654 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 713
Query: 152 LVDEL 156
L+DE+
Sbjct: 714 LMDEI 718
Score = 42.0 bits (97), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 286 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 345
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 346 GALLDAPPNAGLDSLRSALRQIADVERI 373
>gi|13241596|gb|AAK16391.1| DNA mismatch repair protein MutS [Escherichia coli]
Length = 126
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G +PA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 29 LMAYIGSYLPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 88
Query: 153 VDEL 156
+DE+
Sbjct: 89 MDEI 92
>gi|330923791|ref|XP_003300375.1| hypothetical protein PTT_11611 [Pyrenophora teres f. teres 0-1]
gi|311325500|gb|EFQ91520.1| hypothetical protein PTT_11611 [Pyrenophora teres f. teres 0-1]
Length = 1214
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + L+ GC +P S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A
Sbjct: 986 RMTCIAVILAQVGCYLPCTSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETQKILSEA 1045
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1046 TPRSLVILDEL 1056
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 34/89 (38%), Positives = 50/89 (56%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD +L NL + N+ D +TEGTL L+ C+T FGKR+LR + PL + I R D
Sbjct: 622 VLDGQSLINLEIFANTFDGSTEGTLFAMLNRCITPFGKRLLRQWVCHPLADAAKINARLD 681
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L I + + + L DLER++
Sbjct: 682 AVDALNADSTIMDNFSSSLSKLPDLERLI 710
>gi|290511067|ref|ZP_06550436.1| DNA mismatch repair protein MutS [Klebsiella sp. 1_1_55]
gi|289776060|gb|EFD84059.1| DNA mismatch repair protein MutS [Klebsiella sp. 1_1_55]
Length = 853
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL L
Sbjct: 632 LLAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N T+ TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGTDNTLASVLDCTVTPMGSRMLKRWLHMPVRDTAVLVERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q+ TE ++ ++ + DLER+L
Sbjct: 328 IGAL--QERYTE-LQPVLRQVGDLERIL 352
>gi|206579347|ref|YP_002236898.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae 342]
gi|238058944|sp|B5XV49.1|MUTS_KLEP3 RecName: Full=DNA mismatch repair protein MutS
gi|206568405|gb|ACI10181.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae 342]
Length = 853
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL L
Sbjct: 632 LLAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N T+ TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGTDNTLASVLDCTVTPMGSRMLKRWLHMPVRDTAVLVERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q+ TE ++ ++ + DLER+L
Sbjct: 328 IGAL--QERYTE-LQPVLRQVGDLERIL 352
>gi|189201826|ref|XP_001937249.1| DNA mismatch repair protein mutS [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984348|gb|EDU49836.1| DNA mismatch repair protein mutS [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1192
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 47/71 (66%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + L+ GC +P S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A
Sbjct: 964 RMTCIAVILAQVGCYLPCTSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETQKILSEA 1023
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1024 TPRSLVILDEL 1034
Score = 67.4 bits (163), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 33/89 (37%), Positives = 49/89 (55%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD +L NL + N+ D + EGTL L+ C+T FGKR+LR + PL + I R D
Sbjct: 600 VLDGQSLINLEIFANTFDGSAEGTLFAMLNRCITPFGKRLLRQWVCHPLADAAKINARLD 659
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L I + + + L DLER++
Sbjct: 660 AVDALNADSSIMDNFSSSLSKLPDLERLI 688
>gi|112361944|gb|ABI15929.1| MutS [Klebsiella pneumoniae]
Length = 853
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL L
Sbjct: 632 LLAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N T+ TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGTDNTLASVLDSTVTPMGSRMLKRWLHMPVRDTAVLVERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q+ TE ++ ++ + DLER+L
Sbjct: 328 IGAL--QERYTE-LQPVLRQVGDLERIL 352
>gi|419764435|ref|ZP_14290675.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
gi|397743018|gb|EJK90236.1| DNA mismatch repair protein MutS [Klebsiella pneumoniae subsp.
pneumoniae DSM 30104]
Length = 853
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL L
Sbjct: 632 LLAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 45.1 bits (105), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N T+ TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGTDNTLASVLDCTVTPMGSRMLKRWLHMPVRDTAVLVERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q+ TE ++ ++ + DLER+L
Sbjct: 328 IGAL--QERYTE-LQPVLRQVGDLERIL 352
>gi|425075226|ref|ZP_18478329.1| DNA mismatch repair protein mutS [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|425085862|ref|ZP_18488955.1| DNA mismatch repair protein mutS [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
gi|405595429|gb|EKB68819.1| DNA mismatch repair protein mutS [Klebsiella pneumoniae subsp.
pneumoniae WGLW1]
gi|405606371|gb|EKB79363.1| DNA mismatch repair protein mutS [Klebsiella pneumoniae subsp.
pneumoniae WGLW3]
Length = 855
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL L
Sbjct: 634 LLAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVL 693
Query: 153 VDEL 156
+DE+
Sbjct: 694 MDEI 697
Score = 45.1 bits (105), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N T+ TL LD VT G RML+ L P+ + + +RQ
Sbjct: 270 IMDAATRRNLEITQNLAGGTDNTLASVLDCTVTPMGSRMLKRWLHMPVRDTAVLVERQQT 329
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q+ TE ++ ++ + DLER+L
Sbjct: 330 IGAL--QERYTE-LQPVLRQVGDLERIL 354
>gi|336246860|ref|YP_004590570.1| DNA mismatch repair protein MutS [Enterobacter aerogenes KCTC 2190]
gi|334732916|gb|AEG95291.1| DNA mismatch repair protein MutS [Enterobacter aerogenes KCTC 2190]
Length = 853
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL L
Sbjct: 632 LLAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 43.1 bits (100), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N + TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGVDNTLASVLDCTVTPMGSRMLKRWLHMPVRDTAVLVERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q+ TE ++ ++ + DLER+L
Sbjct: 328 IGAL--QERYTE-LQPVLRQVGDLERIL 352
>gi|167837123|ref|ZP_02464006.1| DNA mismatch repair protein [Burkholderia thailandensis MSMB43]
gi|424903627|ref|ZP_18327140.1| hypothetical protein A33K_15001 [Burkholderia thailandensis MSMB43]
gi|390931500|gb|EIP88901.1| hypothetical protein A33K_15001 [Burkholderia thailandensis MSMB43]
Length = 889
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 650 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 709
Query: 152 LVDEL 156
L+DE+
Sbjct: 710 LMDEI 714
Score = 43.9 bits (102), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 282 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 341
Query: 62 SVLLDQK-HIT-EQMRAKMKDLRDLERM 87
LLD H+ + +R+ ++ + D+ER+
Sbjct: 342 GALLDAPAHVGLDSLRSALRQIADVERI 369
>gi|444355033|ref|YP_007391177.1| DNA mismatch repair protein MutS [Enterobacter aerogenes EA1509E]
gi|443905863|emb|CCG33637.1| DNA mismatch repair protein MutS [Enterobacter aerogenes EA1509E]
Length = 841
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL
Sbjct: 619 ALLAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLV 678
Query: 152 LVDEL 156
L+DE+
Sbjct: 679 LMDEI 683
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 45/88 (51%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N + TL LD VT G RML+ L P+ + + +RQ
Sbjct: 256 IMDAATRRNLEITQNLAGGVDNTLASVLDCTVTPMGSRMLKRWLHMPVRDTAVLVERQQT 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L Q+ TE ++ ++ + DLER+L
Sbjct: 316 IGAL--QERYTE-LQPVLRQVGDLERIL 340
>gi|226198830|ref|ZP_03794393.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei
Pakistan 9]
gi|225928930|gb|EEH24954.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei
Pakistan 9]
Length = 893
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 654 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 713
Query: 152 LVDEL 156
L+DE+
Sbjct: 714 LMDEI 718
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 286 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 345
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 346 GALLDAPPNAGLDSLRSALRQIADVERI 373
>gi|254184405|ref|ZP_04890995.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1655]
gi|184214936|gb|EDU11979.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1655]
Length = 939
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 699 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 758
Query: 152 LVDEL 156
L+DE+
Sbjct: 759 LMDEI 763
Score = 42.4 bits (98), Expect = 0.071, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 331 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 390
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 391 GALLDAPPNAGLDSLRSALRQIADVERI 418
>gi|254195822|ref|ZP_04902248.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei S13]
gi|169652567|gb|EDS85260.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei S13]
Length = 895
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 655 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 714
Query: 152 LVDEL 156
L+DE+
Sbjct: 715 LMDEI 719
Score = 42.0 bits (97), Expect = 0.080, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 287 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 346
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 347 GALLDAPPNAGLDSLRSALRQIADVERI 374
>gi|53723768|ref|YP_103293.1| DNA mismatch repair protein MutS [Burkholderia mallei ATCC 23344]
gi|254200246|ref|ZP_04906612.1| DNA mismatch repair protein MutS [Burkholderia mallei FMH]
gi|81685054|sp|Q62J26.1|MUTS_BURMA RecName: Full=DNA mismatch repair protein MutS
gi|189030772|sp|A3ML57.2|MUTS_BURM7 RecName: Full=DNA mismatch repair protein MutS
gi|189030773|sp|A2SAW7.2|MUTS_BURM9 RecName: Full=DNA mismatch repair protein MutS
gi|189030774|sp|A1V5I2.2|MUTS_BURMS RecName: Full=DNA mismatch repair protein MutS
gi|52427191|gb|AAU47784.1| DNA mismatch repair protein MutS [Burkholderia mallei ATCC 23344]
gi|147749842|gb|EDK56916.1| DNA mismatch repair protein MutS [Burkholderia mallei FMH]
Length = 891
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 651 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 710
Query: 152 LVDEL 156
L+DE+
Sbjct: 711 LMDEI 715
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 283 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 342
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 343 GALLDAPPNAGLDSLRSALRQIADVERI 370
>gi|242044644|ref|XP_002460193.1| hypothetical protein SORBIDRAFT_02g024370 [Sorghum bicolor]
gi|241923570|gb|EER96714.1| hypothetical protein SORBIDRAFT_02g024370 [Sorghum bicolor]
Length = 638
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 38/90 (42%), Positives = 52/90 (57%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTN-SDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD+ AL NL +L N GTL QL+HCVT FGKR+L+ + KPL + AI +RQ
Sbjct: 2 ILDAAALENLELLENMRTGGLSGTLYAQLNHCVTGFGKRLLKRWIAKPLYDRSAILRRQS 61
Query: 60 AISVLLD-QKHITEQMRAKMKDLRDLERML 88
A++ + Q R + L D+ER+L
Sbjct: 62 AVATFKGVGQDYAAQFRKDLSRLPDMERLL 91
Score = 64.7 bits (156), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 30/59 (50%), Positives = 44/59 (74%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
G VPA++L L+ VDRIF RMGA+D++ QST+L EL E+ +++ A+K SL ++DEL
Sbjct: 410 GADVPAENLELSLVDRIFVRMGARDHIMAGQSTFLVELEETASVLSSATKNSLVVLDEL 468
>gi|189030771|sp|A3NWZ4.2|MUTS_BURP0 RecName: Full=DNA mismatch repair protein MutS
Length = 891
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 651 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 710
Query: 152 LVDEL 156
L+DE+
Sbjct: 711 LMDEI 715
Score = 42.0 bits (97), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 283 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 342
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 343 GALLDAPPNAGLDSLRSALRQIADVERI 370
>gi|167911642|ref|ZP_02498733.1| DNA mismatch repair protein [Burkholderia pseudomallei 112]
Length = 894
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 654 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 713
Query: 152 LVDEL 156
L+DE+
Sbjct: 714 LMDEI 718
Score = 42.0 bits (97), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 286 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 345
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 346 GALLDAPPNAGLDSLRSALRQIADVERI 373
>gi|167824907|ref|ZP_02456378.1| DNA mismatch repair protein [Burkholderia pseudomallei 9]
Length = 893
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 654 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 713
Query: 152 LVDEL 156
L+DE+
Sbjct: 714 LMDEI 718
Score = 42.7 bits (99), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 42/88 (47%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 286 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 345
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD+ + +R+ ++ + D+ER+
Sbjct: 346 GALLDRPPNAGLDSLRSALRQIADVERI 373
>gi|448082468|ref|XP_004195147.1| Piso0_005692 [Millerozyma farinosa CBS 7064]
gi|359376569|emb|CCE87151.1| Piso0_005692 [Millerozyma farinosa CBS 7064]
Length = 1245
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 36/90 (40%), Positives = 54/90 (60%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD +L+NL VL NS D T +GTL + ++ +T FGKRML+ L+ PL ++ I +R D
Sbjct: 642 ILDGVSLSNLEVLNNSFDGTDKGTLFKLINRAITPFGKRMLKTWLLHPLMDIKKINERYD 701
Query: 60 AISVLLDQK-HITEQMRAKMKDLRDLERML 88
+I ++ E + + L DLER+L
Sbjct: 702 SIDFFMNGGIEFKEMLEKTLNSLPDLERLL 731
Score = 63.9 bits (154), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/63 (47%), Positives = 41/63 (65%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
LS GC VPA LTPVDRI TR+GA DN+ +ST+ EL+E++ I+ + S ++
Sbjct: 1016 LSQIGCYVPASFAALTPVDRIMTRLGANDNIMQGKSTFFVELSETKRILSRTTPKSFVIL 1075
Query: 154 DEL 156
DEL
Sbjct: 1076 DEL 1078
>gi|167903389|ref|ZP_02490594.1| DNA mismatch repair protein [Burkholderia pseudomallei NCTC 13177]
Length = 843
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 629 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 688
Query: 152 LVDEL 156
L+DE+
Sbjct: 689 LMDEI 693
Score = 42.4 bits (98), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 261 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 320
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 321 GALLDAPPNAGLDSLRSALRQIADVERI 348
>gi|76808909|ref|YP_334077.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1710b]
gi|254259362|ref|ZP_04950416.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1710a]
gi|76578362|gb|ABA47837.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1710b]
gi|254218051|gb|EET07435.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1710a]
Length = 938
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 699 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 758
Query: 152 LVDEL 156
L+DE+
Sbjct: 759 LMDEI 763
Score = 42.4 bits (98), Expect = 0.069, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 331 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 390
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 391 GALLDAPPNAGLDSLRSALRQIADVERI 418
>gi|386861179|ref|YP_006274128.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1026b]
gi|418533613|ref|ZP_13099475.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1026a]
gi|418544792|ref|ZP_13110064.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1258a]
gi|418551785|ref|ZP_13116690.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1258b]
gi|385346858|gb|EIF53531.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1258b]
gi|385348086|gb|EIF54725.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1258a]
gi|385360896|gb|EIF66800.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1026a]
gi|385658307|gb|AFI65730.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1026b]
Length = 889
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 650 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 709
Query: 152 LVDEL 156
L+DE+
Sbjct: 710 LMDEI 714
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 282 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 341
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 342 GALLDAPPNAGLDSLRSALRQIADVERI 369
>gi|215919092|ref|NP_820057.2| DNA mismatch repair protein MutS [Coxiella burnetii RSA 493]
gi|206583977|gb|AAO90571.2| DNA mismatch repair protein [Coxiella burnetii RSA 493]
Length = 871
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA + L P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 651 TLLAYIGSFVPAKNAQLGPIDRIFTRIGAADDLASGRSTFMVEMTETAAILHNATEESLV 710
Query: 152 LVDEL 156
L+DE+
Sbjct: 711 LMDEV 715
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+D+ NL ++TN +L LDH T G R+LR + +PL + ++QRQ+A
Sbjct: 285 FIDANTRRNLELITNLQGEEVHSLAWLLDHTATPMGSRLLRRWINRPLRDQILLQQRQNA 344
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+S LL++++ +E + ++ + DLER++
Sbjct: 345 VSTLLEKRNYSE-IYENLRHIGDLERIV 371
>gi|167720301|ref|ZP_02403537.1| DNA mismatch repair protein [Burkholderia pseudomallei DM98]
Length = 939
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 699 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 758
Query: 152 LVDEL 156
L+DE+
Sbjct: 759 LMDEI 763
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 331 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 390
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 391 GALLDAPPNAGLDSLRSALRQIADVERI 418
>gi|126442142|ref|YP_001059585.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 668]
gi|166232118|sp|A3NB64.1|MUTS_BURP6 RecName: Full=DNA mismatch repair protein MutS
gi|126221635|gb|ABN85141.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 668]
Length = 891
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 651 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 710
Query: 152 LVDEL 156
L+DE+
Sbjct: 711 LMDEI 715
Score = 42.0 bits (97), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 283 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 342
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 343 GALLDAPPNAGLDSLRSALRQIADVERI 370
>gi|53719861|ref|YP_108847.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei K96243]
gi|418382638|ref|ZP_12966579.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 354a]
gi|418552939|ref|ZP_13117782.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 354e]
gi|81690299|sp|Q63SR9.1|MUTS_BURPS RecName: Full=DNA mismatch repair protein MutS
gi|52210275|emb|CAH36254.1| DNA mismatch repair protein [Burkholderia pseudomallei K96243]
gi|385372348|gb|EIF77466.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 354e]
gi|385377167|gb|EIF81780.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 354a]
Length = 890
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 651 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 710
Query: 152 LVDEL 156
L+DE+
Sbjct: 711 LMDEI 715
Score = 42.4 bits (98), Expect = 0.073, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 283 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 342
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 343 GALLDAPPNAGLDSLRSALRQIADVERI 370
>gi|425068985|ref|ZP_18472101.1| DNA mismatch repair protein mutS [Proteus mirabilis WGLW6]
gi|404598885|gb|EKA99353.1| DNA mismatch repair protein mutS [Proteus mirabilis WGLW6]
Length = 854
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA+ + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 632 TLLAYIGSFVPAEKAVIGPIDRIFTRVGASDDLASGRSTFMVEMTETANILHNATENSLV 691
Query: 152 LVDEL 156
L+DE+
Sbjct: 692 LMDEI 696
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N + TL LD CVT G RML+ + PL + + +RQDA
Sbjct: 269 ILDAATRRNLELTQNLAGGCDNTLASVLDLCVTPMGSRMLKRWIHTPLRQREQLIKRQDA 328
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
IS L + + +++ ++ + DLER+L
Sbjct: 329 ISAL---QPLYFELQPFLRQVGDLERVL 353
>gi|212212527|ref|YP_002303463.1| DNA mismatch repair protein MutS [Coxiella burnetii CbuG_Q212]
gi|212010937|gb|ACJ18318.1| DNA mismatch repair protein [Coxiella burnetii CbuG_Q212]
Length = 871
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA + L P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 651 TLLAYIGSFVPAKNAQLGPIDRIFTRIGAADDLASGRSTFMVEMTETAAILHNATEESLV 710
Query: 152 LVDEL 156
L+DE+
Sbjct: 711 LMDEV 715
Score = 53.1 bits (126), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 53/88 (60%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+D+ NL ++TN +L LDH T+ G R+LR + +PL + ++QRQ+A
Sbjct: 285 FIDANTRLNLELITNLQGEEVHSLAWLLDHTATAMGSRLLRRWINRPLRDQILLQQRQNA 344
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+S LL++++ +E + ++ + DLER++
Sbjct: 345 VSTLLEKRNYSE-IYENLRHIGDLERIV 371
>gi|197286081|ref|YP_002151953.1| DNA mismatch repair protein MutS [Proteus mirabilis HI4320]
gi|238690090|sp|B4F220.1|MUTS_PROMH RecName: Full=DNA mismatch repair protein MutS
gi|194683568|emb|CAR44439.1| DNA mismatch repair protein [Proteus mirabilis HI4320]
Length = 854
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA+ + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 632 TLLAYIGSFVPAEKAVIGPIDRIFTRVGASDDLASGRSTFMVEMTETANILHNATENSLV 691
Query: 152 LVDEL 156
L+DE+
Sbjct: 692 LMDEI 696
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N + TL LD CVT G RML+ + PL + + +RQDA
Sbjct: 269 ILDAATRRNLELTQNLAGGCDNTLASVLDLCVTPMGSRMLKRWIHTPLRQREQLIKRQDA 328
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
IS L + + +++ ++ + DLER+L
Sbjct: 329 ISAL---QPLYFELQPFLRQVGDLERVL 353
>gi|167895004|ref|ZP_02482406.1| DNA mismatch repair protein [Burkholderia pseudomallei 7894]
gi|217420488|ref|ZP_03451993.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 576]
gi|217395900|gb|EEC35917.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 576]
Length = 939
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 699 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 758
Query: 152 LVDEL 156
L+DE+
Sbjct: 759 LMDEI 763
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 331 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 390
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 391 GALLDAPPNAGLDSLRSALRQIADVERI 418
>gi|126454533|ref|YP_001066865.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1106a]
gi|242315681|ref|ZP_04814697.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1106b]
gi|126228175|gb|ABN91715.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1106a]
gi|242138920|gb|EES25322.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 1106b]
Length = 939
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 699 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 758
Query: 152 LVDEL 156
L+DE+
Sbjct: 759 LMDEI 763
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 331 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 390
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 391 GALLDAPPNAGLDSLRSALRQIADVERI 418
>gi|237812977|ref|YP_002897428.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei
MSHR346]
gi|237505980|gb|ACQ98298.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei
MSHR346]
Length = 894
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 654 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 713
Query: 152 LVDEL 156
L+DE+
Sbjct: 714 LMDEI 718
Score = 42.0 bits (97), Expect = 0.083, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 286 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 345
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 346 GALLDAPPNAGLDSLRSALRQIADVERI 373
>gi|167739298|ref|ZP_02412072.1| DNA mismatch repair protein [Burkholderia pseudomallei 14]
Length = 939
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 699 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 758
Query: 152 LVDEL 156
L+DE+
Sbjct: 759 LMDEI 763
Score = 42.4 bits (98), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 331 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 390
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 391 GALLDAPPNAGLDSLRSALRQIADVERI 418
>gi|121599042|ref|YP_993485.1| DNA mismatch repair protein MutS [Burkholderia mallei SAVP1]
gi|124385860|ref|YP_001029086.1| DNA mismatch repair protein MutS [Burkholderia mallei NCTC 10229]
gi|126448109|ref|YP_001080993.1| DNA mismatch repair protein MutS [Burkholderia mallei NCTC 10247]
gi|167919640|ref|ZP_02506731.1| DNA mismatch repair protein [Burkholderia pseudomallei BCC215]
gi|238561606|ref|ZP_00441712.2| DNA mismatch repair protein MutS [Burkholderia mallei GB8 horse 4]
gi|254178430|ref|ZP_04885085.1| DNA mismatch repair protein MutS [Burkholderia mallei ATCC 10399]
gi|254209324|ref|ZP_04915670.1| DNA mismatch repair protein MutS [Burkholderia mallei JHU]
gi|254358006|ref|ZP_04974279.1| DNA mismatch repair protein MutS [Burkholderia mallei 2002721280]
gi|121227852|gb|ABM50370.1| DNA mismatch repair protein MutS [Burkholderia mallei SAVP1]
gi|124293880|gb|ABN03149.1| DNA mismatch repair protein MutS [Burkholderia mallei NCTC 10229]
gi|126240979|gb|ABO04072.1| DNA mismatch repair protein MutS [Burkholderia mallei NCTC 10247]
gi|147750097|gb|EDK57168.1| DNA mismatch repair protein MutS [Burkholderia mallei JHU]
gi|148027133|gb|EDK85154.1| DNA mismatch repair protein MutS [Burkholderia mallei 2002721280]
gi|160699469|gb|EDP89439.1| DNA mismatch repair protein MutS [Burkholderia mallei ATCC 10399]
gi|238524194|gb|EEP87628.1| DNA mismatch repair protein MutS [Burkholderia mallei GB8 horse 4]
Length = 939
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 699 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 758
Query: 152 LVDEL 156
L+DE+
Sbjct: 759 LMDEI 763
Score = 42.4 bits (98), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 331 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 390
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 391 GALLDAPPNAGLDSLRSALRQIADVERI 418
>gi|209363939|ref|YP_001424366.2| DNA mismatch repair protein MutS [Coxiella burnetii Dugway
5J108-111]
gi|207081872|gb|ABS76827.2| DNA mismatch repair protein [Coxiella burnetii Dugway 5J108-111]
Length = 871
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA + L P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 651 TLLAYIGSFVPAKNAQLGPIDRIFTRIGAADDLASGRSTFMVEMTETAAILHNATEESLV 710
Query: 152 LVDEL 156
L+DE+
Sbjct: 711 LMDEV 715
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+D+ NL ++TN +L LDH T G R+LR + +PL + ++QRQ+A
Sbjct: 285 FIDANTRRNLELITNLQGEEVHSLAWLLDHTATPMGSRLLRRWINRPLRDQILLQQRQNA 344
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+S LL++++ +E + ++ + DLER++
Sbjct: 345 VSTLLEKRNYSE-IYENLRHIGDLERIV 371
>gi|84390123|ref|ZP_00991385.1| DNA mismatch repair protein [Vibrio splendidus 12B01]
gi|84376777|gb|EAP93652.1| DNA mismatch repair protein [Vibrio splendidus 12B01]
Length = 861
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+S T+ +DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL L+DE+
Sbjct: 644 GCYVPAESATIGSIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATPNSLVLMDEI 702
Score = 62.4 bits (150), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N T+ TL E LDH T+ G RML+ L +P+ N+ A+ QR DA
Sbjct: 273 ILDAATRRNLEITQNLSGGTDNTLSEVLDHTATAMGSRMLKRWLHQPMRNISALDQRLDA 332
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I + D TE ++ +K + D+ER+L
Sbjct: 333 IGEMKDLALFTE-LQPTLKQIGDIERIL 359
>gi|134296270|ref|YP_001120005.1| DNA mismatch repair protein MutS [Burkholderia vietnamiensis G4]
gi|189030766|sp|A4JFW7.1|MUTS_BURVG RecName: Full=DNA mismatch repair protein MutS
gi|134139427|gb|ABO55170.1| DNA mismatch repair protein MutS [Burkholderia vietnamiensis G4]
Length = 886
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA S P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 644 ALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLV 703
Query: 152 LVDEL 156
L+DE+
Sbjct: 704 LMDEI 708
Score = 43.1 bits (100), Expect = 0.035, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD NL + T TL LD C T+ G R+LR L P A + RQ AI
Sbjct: 276 LDPATRRNLELTETLRGTESPTLYSLLDTCCTTMGSRLLRHWLHHPPRASVAAQSRQQAI 335
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 336 GALLDAPADANLDALRSALRQIADVERI 363
>gi|407070453|ref|ZP_11101291.1| DNA mismatch repair protein MutS [Vibrio cyclitrophicus ZF14]
Length = 853
Score = 68.9 bits (167), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+S T+ +DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL L+DE+
Sbjct: 636 GCYVPAESATIGSIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATPNSLVLMDEI 694
Score = 63.2 bits (152), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N T+ TL E LDH T+ G RML+ L +P+ N+ A+ QR DA
Sbjct: 265 ILDAATRRNLEITQNLSGGTDNTLAEVLDHTATAMGSRMLKRWLHQPMRNISALDQRLDA 324
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I + D TE ++ +K + D+ER+L
Sbjct: 325 IGEMKDLALFTE-LQPTLKQIGDIERIL 351
>gi|13241576|gb|AAK16381.1| DNA mismatch repair protein MutS [Escherichia coli]
Length = 126
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/63 (44%), Positives = 47/63 (74%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
+++ G VPA + + P DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L+
Sbjct: 30 MAYIGSYVPAQKVEIGPYDRIFTRVGAADDLASGRSTFMVEMTETTNILHNATEYSLVLM 89
Query: 154 DEL 156
DE+
Sbjct: 90 DEI 92
>gi|238754525|ref|ZP_04615880.1| DNA mismatch repair protein mutS [Yersinia ruckeri ATCC 29473]
gi|238707354|gb|EEP99716.1| DNA mismatch repair protein mutS [Yersinia ruckeri ATCC 29473]
Length = 851
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPAD+ + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 631 VLLAHMGSFVPADNAVIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 690
Query: 152 LVDEL 156
L+DE+
Sbjct: 691 LMDEI 695
Score = 57.8 bits (138), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N ++ TL LD CVT G RML+ L P+ + DA+ RQ A
Sbjct: 268 IMDAATRRNLELTQNLSGGSDNTLAAILDQCVTPMGSRMLKRWLHMPIRDRDALAHRQQA 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L ++IT +++ ++ + DLER+L
Sbjct: 328 IGGL---QNITAELQQPLRQVGDLERIL 352
>gi|227356591|ref|ZP_03840978.1| DNA mismatch repair protein [Proteus mirabilis ATCC 29906]
gi|227163347|gb|EEI48274.1| DNA mismatch repair protein [Proteus mirabilis ATCC 29906]
Length = 854
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA+ + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 632 TLLAYIGSFVPAEKAVIGPIDRIFTRVGASDDLASGRSTFMVEMTETANILHNATENSLV 691
Query: 152 LVDEL 156
L+DE+
Sbjct: 692 LMDEI 696
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N + TL LD CVT G RML+ + PL + + +RQDA
Sbjct: 269 ILDAATRRNLELTQNLAGGCDNTLASVLDLCVTPMGSRMLKRWIHTPLRQREQLIKRQDA 328
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
IS L + + +++ ++ + DLER+L
Sbjct: 329 ISAL---QPLYFELQPFLRQVGDLERVL 353
>gi|92087043|sp|Q3JQS6.2|MUTS_BURP1 RecName: Full=DNA mismatch repair protein MutS
Length = 890
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 651 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 710
Query: 152 LVDEL 156
L+DE+
Sbjct: 711 LMDEI 715
Score = 42.0 bits (97), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 283 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 342
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 343 GALLDAPPNAGLDSLRSALRQIADVERI 370
>gi|402566124|ref|YP_006615469.1| DNA mismatch repair protein MutS [Burkholderia cepacia GG4]
gi|402247321|gb|AFQ47775.1| DNA mismatch repair protein MutS [Burkholderia cepacia GG4]
Length = 885
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA S P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 643 ALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLV 702
Query: 152 LVDEL 156
L+DE+
Sbjct: 703 LMDEI 707
Score = 42.0 bits (97), Expect = 0.095, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD NL + T TL LD C T+ G R+LR L P A + RQ AI
Sbjct: 275 LDPATRRNLELTETLRGTESPTLYSLLDTCCTTMGSRLLRHWLHHPPRASVAAQSRQQAI 334
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LL+ + +R+ ++ + D+ER+
Sbjct: 335 GALLEAPANASLDALRSALRQIADVERI 362
>gi|257094871|ref|YP_003168512.1| DNA mismatch repair protein MutS [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
gi|257047395|gb|ACV36583.1| DNA mismatch repair protein MutS [Candidatus Accumulibacter
phosphatis clade IIA str. UW-1]
Length = 848
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPA L P+D+IFTR+GA D+L+G +ST++ E+TES I+ HA++ SL
Sbjct: 622 ALLAHVGSYVPATRAVLGPLDQIFTRIGAADDLAGGRSTFMVEMTESAAILHHATERSLV 681
Query: 152 LVDEL 156
L+DE+
Sbjct: 682 LMDEV 686
Score = 42.7 bits (99), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 42/87 (48%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
+D+ NL + TL LD+C T+ G R+LR L P + R AI
Sbjct: 254 MDTATRRNLELTETLRGQPAPTLYSLLDNCSTAMGSRLLRHALHHPWRDPAIPSARHAAI 313
Query: 62 SVLLDQKHIT-EQMRAKMKDLRDLERM 87
++LLD T ++R ++ L D+ER+
Sbjct: 314 AMLLDDGGCTLRELRQSLRGLADIERI 340
>gi|425071487|ref|ZP_18474593.1| DNA mismatch repair protein mutS [Proteus mirabilis WGLW4]
gi|404598933|gb|EKA99399.1| DNA mismatch repair protein mutS [Proteus mirabilis WGLW4]
Length = 854
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA+ + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 632 TLLAYIGSFVPAEKAVIGPIDRIFTRVGASDDLASGRSTFMVEMTETANILHNATENSLV 691
Query: 152 LVDEL 156
L+DE+
Sbjct: 692 LMDEI 696
Score = 50.4 bits (119), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N + TL LD CVT G RML+ + PL + + +RQDA
Sbjct: 269 ILDAATRRNLELTQNLAGGCDNTLASVLDLCVTPMGSRMLKRWIHTPLRQREQLIKRQDA 328
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
IS L + + +++ ++ + DLER+L
Sbjct: 329 ISAL---QPLYFELQPFLRQVGDLERVL 353
>gi|387902624|ref|YP_006332963.1| DNA mismatch repair protein MutS [Burkholderia sp. KJ006]
gi|387577516|gb|AFJ86232.1| DNA mismatch repair protein MutS [Burkholderia sp. KJ006]
Length = 885
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA S P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 643 ALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLV 702
Query: 152 LVDEL 156
L+DE+
Sbjct: 703 LMDEI 707
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD NL + T TL LD C T+ G R+LR L P A + RQ AI
Sbjct: 275 LDPATRRNLELTETLRGTESPTLYSLLDTCCTTMGSRLLRHWLHHPPRASVAAQSRQQAI 334
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 335 GALLDAPADANLDALRSALRQIADVERI 362
>gi|333983351|ref|YP_004512561.1| DNA mismatch repair protein mutS [Methylomonas methanica MC09]
gi|333807392|gb|AEG00062.1| DNA mismatch repair protein mutS [Methylomonas methanica MC09]
Length = 881
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 78/147 (53%), Gaps = 28/147 (19%)
Query: 32 VTSFGKRMLRAQLVKPLTNLDAIKQRQDAISVLLDQKHITEQMR-----AKMKDLRDLER 86
+ +F +R L +P+ + R+ I+++ + + EQ+ A D D R
Sbjct: 580 LVNFAERAETLNLSQPVLD------REPGITIVAGRHLVVEQLSSIPFVANDLDFSDERR 633
Query: 87 ML----PS----STF---------LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQS 129
ML P+ ST+ L+ GC VPA SL P+D+IFTR+GA D+LS +S
Sbjct: 634 MLVITGPNMGGKSTYMRQAALIVLLAHIGCFVPAQSLRCGPIDKIFTRIGASDDLSSGRS 693
Query: 130 TYLAELTESETIMRHASKYSLALVDEL 156
T++ E++E+ I+ +A+ SL L+DE+
Sbjct: 694 TFMVEMSETANILHNATSNSLILMDEI 720
Score = 37.0 bits (84), Expect = 2.8, Method: Compositional matrix adjust.
Identities = 27/107 (25%), Positives = 56/107 (52%), Gaps = 5/107 (4%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ + NL + ++ + TL+ LD T+ G R LR + +PL + + R +
Sbjct: 292 LDAASRRNLELDSHPSGQLQYTLLGVLDKTATAMGGRCLRRWIHRPLRDHAIVNGRYACV 351
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLSFQGCRVPADSLTL 108
+ LL+ + + +++ ++ + D+ER+ S+ ++ + R P D L L
Sbjct: 352 ASLLENQ-LYRDLQSSLRQVGDIERI---SSRIALKSAR-PRDLLVL 393
>gi|167001781|ref|ZP_02267573.1| DNA mismatch repair protein MutS [Burkholderia mallei PRL-20]
gi|243062469|gb|EES44655.1| DNA mismatch repair protein MutS [Burkholderia mallei PRL-20]
Length = 939
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 699 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 758
Query: 152 LVDEL 156
L+DE+
Sbjct: 759 LMDEI 763
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 331 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 390
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 391 GALLDAPPNAGLDSLRSALRQIADVERI 418
>gi|254297070|ref|ZP_04964523.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 406e]
gi|157806909|gb|EDO84079.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei 406e]
Length = 1001
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 762 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 821
Query: 152 LVDEL 156
L+DE+
Sbjct: 822 LMDEI 826
Score = 42.4 bits (98), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 394 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 453
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 454 GALLDAPPNAGLDSLRSALRQIADVERI 481
>gi|44888195|sp|Q83CQ2.1|MUTS_COXBU RecName: Full=DNA mismatch repair protein MutS
Length = 859
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA + L P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 639 TLLAYIGSFVPAKNAQLGPIDRIFTRIGAADDLASGRSTFMVEMTETAAILHNATEESLV 698
Query: 152 LVDEL 156
L+DE+
Sbjct: 699 LMDEV 703
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+D+ NL ++TN +L LDH T G R+LR + +PL + ++QRQ+A
Sbjct: 273 FIDANTRRNLELITNLQGEEVHSLAWLLDHTATPMGSRLLRRWINRPLRDQILLQQRQNA 332
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+S LL++++ +E + ++ + DLER++
Sbjct: 333 VSTLLEKRNYSE-IYENLRHIGDLERIV 359
>gi|403519291|ref|YP_006653425.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei BPC006]
gi|403074934|gb|AFR16514.1| DNA mismatch repair protein MutS [Burkholderia pseudomallei BPC006]
Length = 976
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/65 (43%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA + P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ +SL
Sbjct: 736 ALMAYVGSYVPAKAARFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPHSLV 795
Query: 152 LVDEL 156
L+DE+
Sbjct: 796 LMDEI 800
Score = 42.0 bits (97), Expect = 0.076, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD + NL + T TL LD C T+ G R+LR L P A + R AI
Sbjct: 368 LDPSTRRNLELTETLRGTESPTLYSLLDTCCTAMGSRLLRHWLHHPPRASVAAQARHQAI 427
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 428 GALLDAPPNAGLDSLRSALRQIADVERI 455
>gi|421870234|ref|ZP_16301869.1| DNA mismatch repair protein MutS [Burkholderia cenocepacia H111]
gi|358069760|emb|CCE52747.1| DNA mismatch repair protein MutS [Burkholderia cenocepacia H111]
Length = 885
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA S P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 643 ALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLV 702
Query: 152 LVDEL 156
L+DE+
Sbjct: 703 LMDEI 707
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD NL + T TL LD C T+ G R+LR L P A + RQ AI
Sbjct: 275 LDPATRRNLELTETLRGTESPTLYSLLDTCCTTMGSRLLRHWLHHPPRASVAAQSRQQAI 334
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 335 GALLDAPANASLDALRSALRQIADVERI 362
>gi|107028732|ref|YP_625827.1| DNA mismatch repair protein MutS [Burkholderia cenocepacia AU 1054]
gi|122977738|sp|Q1BHQ1.1|MUTS_BURCA RecName: Full=DNA mismatch repair protein MutS
gi|105897896|gb|ABF80854.1| DNA mismatch repair protein MutS [Burkholderia cenocepacia AU 1054]
Length = 885
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA S P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 643 ALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLV 702
Query: 152 LVDEL 156
L+DE+
Sbjct: 703 LMDEI 707
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD NL + T TL LD C T+ G R+LR L P A + RQ AI
Sbjct: 275 LDPATRRNLELTETLRGTESPTLYSLLDTCCTTMGSRLLRHWLHHPPRASVAAQSRQQAI 334
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 335 GALLDAPANASLDALRSALRQIADVERI 362
>gi|330817624|ref|YP_004361329.1| DNA mismatch repair protein MutS [Burkholderia gladioli BSR3]
gi|327370017|gb|AEA61373.1| DNA mismatch repair protein MutS [Burkholderia gladioli BSR3]
Length = 915
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA S P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 667 ALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLV 726
Query: 152 LVDEL 156
L+DE+
Sbjct: 727 LMDEI 731
Score = 40.8 bits (94), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 40/88 (45%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD NL + T TL LD C T+ G R+LR L P A + RQ AI
Sbjct: 299 LDPATRRNLELTETLRGTESPTLYSLLDTCGTTMGSRLLRHWLHHPPRASVAAQARQQAI 358
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LL+ + +R ++ + D+ER+
Sbjct: 359 GALLEAAGEASLDSLRGALRQVADVERI 386
>gi|300362260|ref|ZP_07058436.1| DNA mismatch repair protein MutS [Lactobacillus gasseri JV-V03]
gi|300353251|gb|EFJ69123.1| DNA mismatch repair protein MutS [Lactobacillus gasseri JV-V03]
Length = 857
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/59 (52%), Positives = 43/59 (72%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPADS TL D+IFTR+GA D+L QST++ E++E+ ++HA+K SL L DE+
Sbjct: 631 GCFVPADSATLPIFDQIFTRIGAADDLISGQSTFMVEMSEANDALQHATKRSLILFDEI 689
Score = 45.8 bits (107), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 27/95 (28%), Positives = 51/95 (53%), Gaps = 1/95 (1%)
Query: 2 LDSTALANLHVLTNSDNTTE-GTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+ T NL ++ ++ + + G+L LD T+ G R+L++ + +PL ++ I +RQ+
Sbjct: 256 MSHTVQTNLELIKSAKTSKKMGSLFWLLDKTSTAMGGRLLKSWIERPLLSVTEINRRQEM 315
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERMLPSSTFLS 95
+ LLD E++ +K + DLER+ F S
Sbjct: 316 VQALLDDYFTREKVIDSLKGVYDLERLTGRIAFGS 350
>gi|206560523|ref|YP_002231288.1| DNA mismatch repair protein MutS [Burkholderia cenocepacia J2315]
gi|444371566|ref|ZP_21171116.1| DNA mismatch repair protein MutS [Burkholderia cenocepacia
K56-2Valvano]
gi|238693114|sp|B4ED83.1|MUTS_BURCJ RecName: Full=DNA mismatch repair protein MutS
gi|198036565|emb|CAR52462.1| DNA mismatch repair protein [Burkholderia cenocepacia J2315]
gi|443595173|gb|ELT63775.1| DNA mismatch repair protein MutS [Burkholderia cenocepacia
K56-2Valvano]
Length = 885
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA S P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 643 ALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLV 702
Query: 152 LVDEL 156
L+DE+
Sbjct: 703 LMDEI 707
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD NL + T TL LD C T+ G R+LR L P A + RQ AI
Sbjct: 275 LDPATRRNLELTETLRGTESPTLYSLLDTCCTTMGSRLLRHWLHHPPRASVAAQSRQQAI 334
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 335 GALLDAPANASLDALRSALRQIADVERI 362
>gi|161831167|ref|YP_001596673.1| DNA mismatch repair protein MutS [Coxiella burnetii RSA 331]
gi|189030765|sp|A9NCN3.1|MUTS_COXBR RecName: Full=DNA mismatch repair protein MutS
gi|161763034|gb|ABX78676.1| DNA mismatch repair protein MutS [Coxiella burnetii RSA 331]
Length = 859
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA + L P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 639 TLLAYIGSFVPAKNAQLGPIDRIFTRIGAADDLASGRSTFMVEMTETAAILHNATEESLV 698
Query: 152 LVDEL 156
L+DE+
Sbjct: 699 LMDEV 703
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+D+ NL ++TN +L LDH T G R+LR + +PL + ++QRQ+A
Sbjct: 273 FIDANTRRNLELITNLQGEEVHSLAWLLDHTATPMGSRLLRRWINRPLRDQILLQQRQNA 332
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+S LL++++ +E + ++ + DLER++
Sbjct: 333 VSTLLEKRNYSE-IYENLRHIGDLERIV 359
>gi|17508447|ref|NP_491163.1| Protein MSH-6 [Caenorhabditis elegans]
gi|373220156|emb|CCD72556.1| Protein MSH-6 [Caenorhabditis elegans]
Length = 1186
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/63 (50%), Positives = 47/63 (74%)
Query: 94 LSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALV 153
L+ G VPA S+ LTP+DRIFTR+GA D + +ST+ EL E++ ++++A+K+SL LV
Sbjct: 981 LAHIGSMVPAFSMRLTPIDRIFTRIGANDRIMCGESTFFIELKETDIMLKNATKHSLLLV 1040
Query: 154 DEL 156
DEL
Sbjct: 1041 DEL 1043
Score = 59.3 bits (142), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/90 (35%), Positives = 53/90 (58%), Gaps = 2/90 (2%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD TAL NL+++ N ++ +L ++ C T FG+R+LR+ L++P + ++QRQ A
Sbjct: 572 ILDGTALENLNIVPNGRDSHLTSLYYVINKCSTPFGRRLLRSWLLQPTCDPKKLEQRQKA 631
Query: 61 ISVLL--DQKHITEQMRAKMKDLRDLERML 88
I L+ D A +K + DL+R+L
Sbjct: 632 IKWLVSPDASSFMTTATATLKKIPDLDRLL 661
>gi|78066863|ref|YP_369632.1| DNA mismatch repair protein MutS [Burkholderia sp. 383]
gi|90109841|sp|Q39EX8.1|MUTS_BURS3 RecName: Full=DNA mismatch repair protein MutS
gi|77967608|gb|ABB08988.1| DNA mismatch repair protein MutS [Burkholderia sp. 383]
Length = 885
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 45/64 (70%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA S P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL L
Sbjct: 644 LMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLVL 703
Query: 153 VDEL 156
+DE+
Sbjct: 704 MDEI 707
Score = 43.5 bits (101), Expect = 0.028, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD NL + T TL LD C T+ G R+LR L P A + RQ AI
Sbjct: 275 LDPATRRNLELTETLRGTESPTLYSLLDTCCTTMGSRLLRHWLHHPPRASVAAQSRQQAI 334
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 335 GALLDAPANASLDALRSALRQIADVERI 362
>gi|153206840|ref|ZP_01945681.1| DNA mismatch repair protein MutS [Coxiella burnetii 'MSU Goat
Q177']
gi|165918512|ref|ZP_02218598.1| DNA mismatch repair protein MutS [Coxiella burnetii Q321]
gi|120577203|gb|EAX33827.1| DNA mismatch repair protein MutS [Coxiella burnetii 'MSU Goat
Q177']
gi|165917758|gb|EDR36362.1| DNA mismatch repair protein MutS [Coxiella burnetii Q321]
Length = 859
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA + L P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 639 TLLAYIGSFVPAKNAQLGPIDRIFTRIGAADDLASGRSTFMVEMTETAAILHNATEESLV 698
Query: 152 LVDEL 156
L+DE+
Sbjct: 699 LMDEV 703
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+D+ NL ++TN +L LDH T G R+LR + +PL + ++QRQ+A
Sbjct: 273 FIDANTRRNLELITNLQGEEVHSLAWLLDHTATPMGSRLLRRWINRPLRDQILLQQRQNA 332
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+S LL++++ +E + ++ + DLER++
Sbjct: 333 VSTLLEKRNYSE-IYENLRHIGDLERIV 359
>gi|170733443|ref|YP_001765390.1| DNA mismatch repair protein MutS [Burkholderia cenocepacia MC0-3]
gi|238688586|sp|B1JUW8.1|MUTS_BURCC RecName: Full=DNA mismatch repair protein MutS
gi|169816685|gb|ACA91268.1| DNA mismatch repair protein MutS [Burkholderia cenocepacia MC0-3]
Length = 885
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA S P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 643 ALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLV 702
Query: 152 LVDEL 156
L+DE+
Sbjct: 703 LMDEI 707
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD NL + T TL LD C T+ G R+LR L P A + RQ AI
Sbjct: 275 LDPATRRNLELTETLRGTESPTLYSLLDTCCTTMGSRLLRHWLHHPPRASVAAQSRQQAI 334
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 335 GALLDAPANASLDALRSALRQIADVERI 362
>gi|189030712|sp|A9KG24.1|MUTS_COXBN RecName: Full=DNA mismatch repair protein MutS
Length = 859
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA + L P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 639 TLLAYIGSFVPAKNAQLGPIDRIFTRIGAADDLASGRSTFMVEMTETAAILHNATEESLV 698
Query: 152 LVDEL 156
L+DE+
Sbjct: 699 LMDEV 703
Score = 52.8 bits (125), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+D+ NL ++TN +L LDH T G R+LR + +PL + ++QRQ+A
Sbjct: 273 FIDANTRRNLELITNLQGEEVHSLAWLLDHTATPMGSRLLRRWINRPLRDQILLQQRQNA 332
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+S LL++++ +E + ++ + DLER++
Sbjct: 333 VSTLLEKRNYSE-IYENLRHIGDLERIV 359
>gi|116690109|ref|YP_835732.1| DNA mismatch repair protein MutS [Burkholderia cenocepacia HI2424]
gi|166232117|sp|A0K8L2.1|MUTS_BURCH RecName: Full=DNA mismatch repair protein MutS
gi|116648198|gb|ABK08839.1| DNA mismatch repair protein MutS [Burkholderia cenocepacia HI2424]
Length = 885
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA S P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 643 ALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLV 702
Query: 152 LVDEL 156
L+DE+
Sbjct: 703 LMDEI 707
Score = 43.5 bits (101), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD NL + T TL LD C T+ G R+LR L P A + RQ AI
Sbjct: 275 LDPATRRNLELTETLRGTESPTLYSLLDTCCTTMGSRLLRHWLHHPPRASVAAQSRQQAI 334
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 335 GALLDAPANASLDALRSALRQIADVERI 362
>gi|212218392|ref|YP_002305179.1| DNA mismatch repair protein MutS [Coxiella burnetii CbuK_Q154]
gi|212012654|gb|ACJ20034.1| DNA mismatch repair protein [Coxiella burnetii CbuK_Q154]
Length = 871
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 48/65 (73%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
T L++ G VPA + L P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 651 TLLAYIGSFVPAKNAQLGPIDRIFTRIGAADDLASGRSTFMVEMTETAAILHNATEESLV 710
Query: 152 LVDEL 156
L+DE+
Sbjct: 711 LMDEV 715
Score = 52.8 bits (125), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 52/88 (59%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+D+ NL ++TN +L LDH T G R+LR + +PL + ++QRQ+A
Sbjct: 285 FIDANTRRNLELITNLQGEEVHSLAWLLDHTATPMGSRLLRRWINRPLRDQILLQQRQNA 344
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
+S LL++++ +E + ++ + DLER++
Sbjct: 345 VSTLLEKRNYSE-IYENLRHIGDLERIV 371
>gi|207346749|gb|EDZ73153.1| YDR097Cp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 393
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + ++ GC VP +S LTP+DRI TR+GA DN+ +ST+ EL E++ I+ A
Sbjct: 144 RMACIAVIMAQMGCYVPCESAVLTPIDRIMTRLGANDNIMQGKSTFFVELAETKKILDMA 203
Query: 146 SKYSLALVDEL 156
+ SL +VDEL
Sbjct: 204 TNRSLLVVDEL 214
>gi|148978206|ref|ZP_01814736.1| DNA mismatch repair protein [Vibrionales bacterium SWAT-3]
gi|145962628|gb|EDK27904.1| DNA mismatch repair protein [Vibrionales bacterium SWAT-3]
Length = 853
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+S T+ +DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL L+DE+
Sbjct: 636 GCYVPAESATIGSIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATPNSLVLMDEI 694
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N T+ TL E LDH T+ G RML+ L +P+ N+ A+ QR DA
Sbjct: 265 ILDAATRRNLEITQNLGGGTDNTLAEVLDHTATAMGSRMLKRWLHQPMRNISALDQRLDA 324
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I + D TE ++ +K + D+ER+L
Sbjct: 325 IGEMKDLALFTE-LQPTLKQIGDIERIL 351
>gi|115352175|ref|YP_774014.1| DNA mismatch repair protein MutS [Burkholderia ambifaria AMMD]
gi|123128122|sp|Q0BDU3.1|MUTS_BURCM RecName: Full=DNA mismatch repair protein MutS
gi|115282163|gb|ABI87680.1| DNA mismatch repair protein MutS [Burkholderia ambifaria AMMD]
Length = 886
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA S P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 643 ALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLV 702
Query: 152 LVDEL 156
L+DE+
Sbjct: 703 LMDEI 707
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD NL + T TL LD C T+ G R+LR L P A + RQ AI
Sbjct: 275 LDPATRRNLELTETLRGTESPTLYSLLDTCCTTMGSRLLRHWLHHPPRASVAAQSRQQAI 334
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 335 GALLDAPADASLDALRSALRQIADVERI 362
>gi|300946988|ref|ZP_07161214.1| DNA mismatch repair protein MutS [Escherichia coli MS 116-1]
gi|301645284|ref|ZP_07245235.1| DNA mismatch repair protein MutS [Escherichia coli MS 146-1]
gi|300453375|gb|EFK16995.1| DNA mismatch repair protein MutS [Escherichia coli MS 116-1]
gi|301076449|gb|EFK91255.1| DNA mismatch repair protein MutS [Escherichia coli MS 146-1]
Length = 853
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+T++ I+ +A++YSL L
Sbjct: 632 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTKTANILHNATEYSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEI 695
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T ++ ++ + DLER+L
Sbjct: 328 IGALQD---FTAGLQPVLRQVGDLERIL 352
>gi|288965516|pdb|3K0S|A Chain A, Crystal Structure Of E.Coli Dna Mismatch Repair Protein
Muts, D693n Mutant, In Complex With Gt Mismatched Dna
gi|288965517|pdb|3K0S|B Chain B, Crystal Structure Of E.Coli Dna Mismatch Repair Protein
Muts, D693n Mutant, In Complex With Gt Mismatched Dna
Length = 799
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++YSL L
Sbjct: 631 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEYSLVL 690
Query: 153 VDEL 156
++E+
Sbjct: 691 MNEI 694
Score = 45.4 bits (106), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD VT G RML+ L P+ + + +RQ
Sbjct: 267 IMDAATRRNLEITQNLAGGAENTLASVLDCTVTPMGSRMLKRWLHMPVRDTRVLLERQQT 326
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D T ++ ++ + DLER+L
Sbjct: 327 IGALQD---FTAGLQPVLRQVGDLERIL 351
>gi|170699304|ref|ZP_02890353.1| DNA mismatch repair protein MutS [Burkholderia ambifaria IOP40-10]
gi|170135796|gb|EDT04075.1| DNA mismatch repair protein MutS [Burkholderia ambifaria IOP40-10]
Length = 885
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA S P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 643 ALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLV 702
Query: 152 LVDEL 156
L+DE+
Sbjct: 703 LMDEI 707
Score = 43.5 bits (101), Expect = 0.031, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD NL + T TL LD C T+ G R+LR L P A + RQ AI
Sbjct: 275 LDPATRRNLELTETLRGTESPTLYSLLDTCCTTMGSRLLRHWLHHPPRASVAAQSRQQAI 334
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 335 GALLDAPANASLDALRSALRQIADVERI 362
>gi|2662381|dbj|BAA23675.1| GTBP-ALT [Homo sapiens]
gi|2696085|dbj|BAA23673.1| GTBP-ALT [Homo sapiens]
Length = 1068
Score = 68.9 bits (167), Expect = 7e-10, Method: Composition-based stats.
Identities = 39/89 (43%), Positives = 53/89 (59%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNSDN-TTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD+ L NL + N N +TEGTL+E++D C T FGKR+L+ L PL N AI R D
Sbjct: 734 VLDAVTLNNLEIFLNGTNGSTEGTLLERVDTCHTPFGKRLLKQWLCAPLCNHYAINDRLD 793
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
AI L+ ++ +K L DLER+L
Sbjct: 794 AIEDLMVVPDKISEVVELLKKLPDLERLL 822
>gi|399894484|gb|AFP54328.1| methyl-directed mismatch repair protein, partial [Gilliamella
apicola]
Length = 842
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 46/65 (70%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L++ G VPA + PVDRIFTR+GA D+L+ +ST++ E+TE+ IM +A++ SL
Sbjct: 626 VLLTYIGSFVPASQAIIGPVDRIFTRIGASDDLASGRSTFMVEMTETANIMHNATEQSLV 685
Query: 152 LVDEL 156
L+DE+
Sbjct: 686 LMDEI 690
Score = 51.6 bits (122), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 49/88 (55%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
+LD+ NL + N T+ T+ E LD T G RML+ L P+ N+ ++ RQ A
Sbjct: 263 VLDAATRRNLEITENLSGGTQNTVAEILDKTQTPMGSRMLKRWLHAPIRNVTLLQNRQQA 322
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
IS L Q HI + ++ +K + DLER+L
Sbjct: 323 ISEL--QNHI-DDIQPLLKLIGDLERIL 347
>gi|416923211|ref|ZP_11932772.1| DNA mismatch repair protein MutS, partial [Burkholderia sp. TJI49]
gi|325526732|gb|EGD04249.1| DNA mismatch repair protein MutS [Burkholderia sp. TJI49]
Length = 569
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA S P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 328 ALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLV 387
Query: 152 LVDEL 156
L+DE+
Sbjct: 388 LMDEI 392
>gi|172061043|ref|YP_001808695.1| DNA mismatch repair protein MutS [Burkholderia ambifaria MC40-6]
gi|238689171|sp|B1YSP3.1|MUTS_BURA4 RecName: Full=DNA mismatch repair protein MutS
gi|171993560|gb|ACB64479.1| DNA mismatch repair protein MutS [Burkholderia ambifaria MC40-6]
Length = 885
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA S P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 643 ALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLV 702
Query: 152 LVDEL 156
L+DE+
Sbjct: 703 LMDEI 707
Score = 43.1 bits (100), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD NL + T TL LD C T+ G R+LR L P A + RQ AI
Sbjct: 275 LDPATRRNLELTETLRGTESPTLYSLLDTCCTTMGSRLLRHWLHHPPRASVAAQSRQQAI 334
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 335 GALLDAPADASLDALRSALRQIADVERI 362
>gi|86146340|ref|ZP_01064664.1| DNA mismatch repair protein [Vibrio sp. MED222]
gi|85835819|gb|EAQ53953.1| DNA mismatch repair protein [Vibrio sp. MED222]
Length = 853
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+S T+ +DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL L+DE+
Sbjct: 636 GCYVPAESATIGSIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATPNSLVLMDEI 694
Score = 61.6 bits (148), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/88 (38%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N ++ TL E LDH T+ G RML+ L +P+ N+ A+ QR DA
Sbjct: 265 ILDAATRRNLEITQNLGGGSDNTLAEVLDHTATAMGSRMLKRWLHQPMRNISALDQRLDA 324
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I + D TE ++ +K + D+ER+L
Sbjct: 325 IGEMKDLALFTE-LQPTLKQIGDIERIL 351
>gi|218710549|ref|YP_002418170.1| DNA mismatch repair protein MutS [Vibrio splendidus LGP32]
gi|254766647|sp|B7VK59.1|MUTS_VIBSL RecName: Full=DNA mismatch repair protein MutS
gi|218323568|emb|CAV19791.1| DNA mismatch repair protein mutS [Vibrio splendidus LGP32]
Length = 853
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/59 (49%), Positives = 45/59 (76%)
Query: 98 GCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLALVDEL 156
GC VPA+S T+ +DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+ SL L+DE+
Sbjct: 636 GCYVPAESATIGSIDRIFTRIGASDDLASGRSTFMVEMTETANILHNATPNSLVLMDEI 694
Score = 62.8 bits (151), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 51/88 (57%), Gaps = 1/88 (1%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
ILD+ NL + N T+ TL E LDH T+ G RML+ L +P+ N+ A+ QR DA
Sbjct: 265 ILDAATRRNLEITQNLGGGTDNTLAEVLDHTATAMGSRMLKRWLHQPMRNISALDQRLDA 324
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I + D TE ++ +K + D+ER+L
Sbjct: 325 IGEMKDLALFTE-LQPTLKQIGDIERIL 351
>gi|343518606|ref|ZP_08755596.1| DNA mismatch repair protein MutS [Haemophilus pittmaniae HK 85]
gi|343393521|gb|EGV06076.1| DNA mismatch repair protein MutS [Haemophilus pittmaniae HK 85]
Length = 857
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/65 (47%), Positives = 43/65 (66%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPADS L P+DRIFTR+GA D+L+ +ST++ E+TE I+ A SL
Sbjct: 630 ALLAHIGSYVPADSACLGPIDRIFTRIGASDDLASGRSTFMVEMTEMANILHQAGAQSLV 689
Query: 152 LVDEL 156
L+DE+
Sbjct: 690 LIDEI 694
Score = 37.7 bits (86), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 27/87 (31%), Positives = 45/87 (51%), Gaps = 1/87 (1%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD+ NL + N T+ TL LD CVT G R+L+ L +P+ + QRQ I
Sbjct: 266 LDAATRRNLELTQNLAGGTDNTLASVLDKCVTPMGSRLLKRWLHQPIRQRQTLLQRQQTI 325
Query: 62 SVLLDQKHITEQMRAKMKDLRDLERML 88
L+ + + ++ + ++ D+ER+L
Sbjct: 326 GELI-AADLPDTLQPLLHNVGDMERIL 351
>gi|238791266|ref|ZP_04634905.1| DNA mismatch repair protein mutS [Yersinia intermedia ATCC 29909]
gi|238729399|gb|EEQ20914.1| DNA mismatch repair protein mutS [Yersinia intermedia ATCC 29909]
Length = 819
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/65 (46%), Positives = 47/65 (72%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
L+ G VPA+S + PVDRIFTR+GA D+L+ +ST++ E+TE+ I+ +A++ SL
Sbjct: 599 VLLAHMGSYVPAESAIIGPVDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEQSLV 658
Query: 152 LVDEL 156
L+DE+
Sbjct: 659 LMDEI 663
Score = 51.2 bits (121), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/88 (34%), Positives = 48/88 (54%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
++D+ NL + N +E TL LD VT+ G RML+ L P+ ++ + RQ A
Sbjct: 236 VMDAATRRNLELTQNLSGGSENTLAAILDCSVTAMGSRMLKRWLHMPVRDIKVLSDRQQA 295
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I L D IT +++ ++ + DLER+L
Sbjct: 296 IGGLQD---ITAELQTPLRQVGDLERIL 320
>gi|134058585|emb|CAK44621.1| unnamed protein product [Aspergillus niger]
Length = 1193
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 31/89 (34%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
+LD L N+ + +NS D +EGTL + L+ C+T FGKRM + + PL + + I R D
Sbjct: 594 VLDGQTLINMEIFSNSFDGGSEGTLFQLLNRCITPFGKRMFKQWVCHPLVDANKINARLD 653
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ L + +Q +++ + DLER++
Sbjct: 654 AVDALNADPTVRDQFSSQLTKMPDLERLI 682
Score = 68.2 bits (165), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%)
Query: 86 RMLPSSTFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHA 145
RM + ++ GC +P S LTPVDRI +R+GA DN+ AQST+ EL+E++ I+ A
Sbjct: 960 RMTCVAVIMAQIGCYLPCQSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEA 1019
Query: 146 SKYSLALVDEL 156
+ SL ++DEL
Sbjct: 1020 TPRSLVILDEL 1030
>gi|254247817|ref|ZP_04941138.1| MutS 1 protein [Burkholderia cenocepacia PC184]
gi|124872593|gb|EAY64309.1| MutS 1 protein [Burkholderia cenocepacia PC184]
Length = 885
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA S P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 643 ALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLV 702
Query: 152 LVDEL 156
L+DE+
Sbjct: 703 LMDEI 707
Score = 43.5 bits (101), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 41/88 (46%), Gaps = 2/88 (2%)
Query: 2 LDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDAI 61
LD NL + T TL LD C T+ G R+LR L P A + RQ AI
Sbjct: 275 LDPATRRNLELTETLRGTESPTLYSLLDTCCTTMGSRLLRHWLHHPPRASVAAQSRQQAI 334
Query: 62 SVLLDQKHIT--EQMRAKMKDLRDLERM 87
LLD + +R+ ++ + D+ER+
Sbjct: 335 GALLDAPANASLDALRSALRQIADVERI 362
>gi|223019691|dbj|BAH22360.1| DNA mismatch repair protein MutS [Enterobacter cloacae]
Length = 853
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL L
Sbjct: 632 LLAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEV 695
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD+ VT G RML+ L P+ + D + RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGVENTLASVLDNTVTPMGSRMLKRWLHMPVRDTDTLVCRQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I+ L D+ +++ ++ + DLER+L
Sbjct: 328 IAALQDR---YTELQPVLRQVGDLERIL 352
>gi|13241508|gb|AAK16347.1| DNA mismatch repair protein MutS [Shigella dysenteriae]
gi|13241566|gb|AAK16376.1| DNA mismatch repair protein MutS [Escherichia coli]
Length = 126
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 47/64 (73%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
+++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+ E+ I+ +A++YSL L
Sbjct: 29 LMAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMIETANILHNATEYSLVL 88
Query: 153 VDEL 156
+DE+
Sbjct: 89 MDEI 92
>gi|296104417|ref|YP_003614563.1| DNA mismatch repair protein MutS [Enterobacter cloacae subsp.
cloacae ATCC 13047]
gi|295058876|gb|ADF63614.1| DNA mismatch repair protein MutS [Enterobacter cloacae subsp.
cloacae ATCC 13047]
Length = 853
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL L
Sbjct: 632 LLAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEV 695
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD+ VT G RML+ L P+ + D + RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGVENTLASVLDNTVTPMGSRMLKRWLHMPVRDTDTLVCRQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I+ L D+ +++ ++ + DLER+L
Sbjct: 328 IAALQDR---YTELQPVLRQVGDLERIL 352
>gi|444357924|ref|ZP_21159399.1| DNA mismatch repair protein MutS-like protein, partial
[Burkholderia cenocepacia BC7]
gi|443605215|gb|ELT73079.1| DNA mismatch repair protein MutS-like protein, partial
[Burkholderia cenocepacia BC7]
Length = 488
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 29/65 (44%), Positives = 45/65 (69%)
Query: 92 TFLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLA 151
+++ G VPA S P+DRIFTR+GA D+L+G +ST++ E+TE+ I+ A+ SL
Sbjct: 246 ALMAYVGSYVPAKSACFGPIDRIFTRIGAADDLAGGRSTFMVEMTEAAAILNDATPQSLV 305
Query: 152 LVDEL 156
L+DE+
Sbjct: 306 LMDEI 310
>gi|392980422|ref|YP_006479010.1| DNA mismatch repair protein MutS [Enterobacter cloacae subsp.
dissolvens SDM]
gi|392326355|gb|AFM61308.1| DNA mismatch repair protein MutS [Enterobacter cloacae subsp.
dissolvens SDM]
Length = 853
Score = 68.9 bits (167), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 48/64 (75%)
Query: 93 FLSFQGCRVPADSLTLTPVDRIFTRMGAKDNLSGAQSTYLAELTESETIMRHASKYSLAL 152
L++ G VPA + + P+DRIFTR+GA D+L+ +ST++ E+TE+ I+ +A+++SL L
Sbjct: 632 LLAYIGSYVPAQKVEIGPIDRIFTRVGAADDLASGRSTFMVEMTETANILHNATEHSLVL 691
Query: 153 VDEL 156
+DE+
Sbjct: 692 MDEV 695
Score = 47.0 bits (110), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 46/88 (52%), Gaps = 3/88 (3%)
Query: 1 ILDSTALANLHVLTNSDNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQDA 60
I+D+ NL + N E TL LD+ VT G RML+ L P+ + D + RQ
Sbjct: 268 IMDAATRRNLEITQNLAGGVENTLASVLDNTVTPMGSRMLKRWLHMPVRDTDTLVCRQQT 327
Query: 61 ISVLLDQKHITEQMRAKMKDLRDLERML 88
I+ L D+ +++ ++ + DLER+L
Sbjct: 328 IAALQDR---YTELQPVLRQVGDLERIL 352
>gi|430813560|emb|CCJ29107.1| unnamed protein product [Pneumocystis jirovecii]
Length = 826
Score = 68.6 bits (166), Expect = 7e-10, Method: Composition-based stats.
Identities = 40/89 (44%), Positives = 53/89 (59%), Gaps = 2/89 (2%)
Query: 1 ILDSTALANLHVLTNS-DNTTEGTLIEQLDHCVTSFGKRMLRAQLVKPLTNLDAIKQRQD 59
ILD L NL + NS D TEGTLI+ L+ C+T FGKR+ R L PL ++ I +R D
Sbjct: 571 ILDGQTLKNLEIFNNSYDGGTEGTLIKLLNRCITPFGKRLFRLWLCHPLRSVKDINERLD 630
Query: 60 AISVLLDQKHITEQMRAKMKDLRDLERML 88
A+ LL+ I + + K L DLERM+
Sbjct: 631 AVE-LLNDLSIRKIIIDSFKTLPDLERMI 658
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.318 0.130 0.353
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 2,023,410,292
Number of Sequences: 23463169
Number of extensions: 69578946
Number of successful extensions: 205449
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 6496
Number of HSP's successfully gapped in prelim test: 305
Number of HSP's that attempted gapping in prelim test: 193112
Number of HSP's gapped (non-prelim): 12506
length of query: 156
length of database: 8,064,228,071
effective HSP length: 118
effective length of query: 38
effective length of database: 9,590,541,425
effective search space: 364440574150
effective search space used: 364440574150
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.8 bits)
S2: 71 (32.0 bits)