BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13256
(216 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|1ULQ|A Chain A, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8
pdb|1ULQ|B Chain B, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8
pdb|1ULQ|C Chain C, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8
pdb|1ULQ|D Chain D, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8
pdb|1ULQ|E Chain E, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8
pdb|1ULQ|F Chain F, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8
pdb|1ULQ|G Chain G, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8
pdb|1ULQ|H Chain H, Crystal Structure Of Tt0182 From Thermus Thermophilus Hb8
Length = 401
Score = 49.3 bits (116), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/164 (26%), Positives = 72/164 (43%), Gaps = 38/164 (23%)
Query: 59 TLEQIMNSPKIF---GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFE----ANAVEIVGL 111
+LE++ +F G +T P +DGAAA +L S+D+ + +G A+ + G+
Sbjct: 230 SLEKLAALRPVFREGGTVTAGNSSPLNDGAAAVLLVSDDYAKAHGLRPLARVRAIAVAGV 289
Query: 112 EMATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYE 171
+++G A L E+ + SD+ +IEL++ F+A L
Sbjct: 290 PP--------------RIMGIGPVPATRKAL-ERAGLSFSDLGLIELNEAFAAQALAVLR 334
Query: 172 ALGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
L +D +NP+GG I+ GHPLGA+G
Sbjct: 335 EWSLS----MED------------QRLNPNGGAIALGHPLGASG 362
>pdb|2WKU|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h Mutant.
pdb|2WKU|B Chain B, Biosynthetic Thiolase From Z. Ramigera. The N316h Mutant.
pdb|2WKU|C Chain C, Biosynthetic Thiolase From Z. Ramigera. The N316h Mutant.
pdb|2WKU|D Chain D, Biosynthetic Thiolase From Z. Ramigera. The N316h Mutant
Length = 392
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 64/145 (44%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAAA+L SE R G + IV + +T D K++
Sbjct: 239 GTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLG-RIV-------SWATVGVDP--KVM 288
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
G A+ L E+ K D+D++E H+ F+A + LG P
Sbjct: 289 GTGPIPASRKAL-ERAGWKIGDLDLVEAHEAFAAQACAVNKDLGWDP------------- 334
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
+VN +GG I+ GHP+GA+G
Sbjct: 335 -----SIVNVNGGAIAIGHPIGASG 354
>pdb|3GOA|A Chain A, Crystal Structure Of The Salmonella Typhimurium Fada 3-
Ketoacyl-Coa Thiolase
pdb|3GOA|B Chain B, Crystal Structure Of The Salmonella Typhimurium Fada 3-
Ketoacyl-Coa Thiolase
Length = 387
Score = 43.9 bits (102), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 48/171 (28%), Positives = 72/171 (42%), Gaps = 30/171 (17%)
Query: 49 NPNSQFQVEYTLEQIMNSPKIFGPLTKLQCCPTS----DGAAAAVLASEDFVRRYGFEAN 104
N + + E T+E + F P++ TS DGAAA ++ SE R G +
Sbjct: 205 NYDEVIRPETTVEALSTLRPAFDPVSGTVTAGTSSALSDGAAAXLVXSESRARELGLKPR 264
Query: 105 AVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSA 164
A + + D I G+ A+ L +K + SDIDV E ++ F+A
Sbjct: 265 A--------RIRSXAVVGCDPSIX--GYGPVPASKLAL-KKAGLSASDIDVFEXNEAFAA 313
Query: 165 NELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
L + LGL + ID +N +GG I+ GHPLG +G
Sbjct: 314 QILPCIKDLGL------XEQID---------EKINLNGGAIALGHPLGCSG 349
>pdb|1M4S|A Chain A, Biosynthetic Thiolase, Cys89 Acetylated, Unliganded Form
pdb|1M4S|B Chain B, Biosynthetic Thiolase, Cys89 Acetylated, Unliganded Form
pdb|1M4S|C Chain C, Biosynthetic Thiolase, Cys89 Acetylated, Unliganded Form
pdb|1M4S|D Chain D, Biosynthetic Thiolase, Cys89 Acetylated, Unliganded Form
pdb|1M4T|A Chain A, Biosynthetic Thiolase, Cys89 Butyrylated
pdb|1M4T|B Chain B, Biosynthetic Thiolase, Cys89 Butyrylated
pdb|1M4T|C Chain C, Biosynthetic Thiolase, Cys89 Butyrylated
pdb|1M4T|D Chain D, Biosynthetic Thiolase, Cys89 Butyrylated
pdb|1NL7|A Chain A, Z. Ramigera Biosynthetic Thiolase, Acetylated Enzyme
Complexed With Coa At Ph 9.5
pdb|1NL7|B Chain B, Z. Ramigera Biosynthetic Thiolase, Acetylated Enzyme
Complexed With Coa At Ph 9.5
pdb|1NL7|C Chain C, Z. Ramigera Biosynthetic Thiolase, Acetylated Enzyme
Complexed With Coa At Ph 9.5
pdb|1NL7|D Chain D, Z. Ramigera Biosynthetic Thiolase, Acetylated Enzyme
Complexed With Coa At Ph 9.5
pdb|1OU6|A Chain A, Biosynthetic Thiolase From Zoogloea Ramigera In Complex
With Acetyl-O- Pantetheine-11-Pivalate
pdb|1OU6|B Chain B, Biosynthetic Thiolase From Zoogloea Ramigera In Complex
With Acetyl-O- Pantetheine-11-Pivalate
pdb|1OU6|C Chain C, Biosynthetic Thiolase From Zoogloea Ramigera In Complex
With Acetyl-O- Pantetheine-11-Pivalate
pdb|1OU6|D Chain D, Biosynthetic Thiolase From Zoogloea Ramigera In Complex
With Acetyl-O- Pantetheine-11-Pivalate
pdb|2VU0|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
Oxidised Enzyme With Coenzyme A.
pdb|2VU0|B Chain B, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
Oxidised Enzyme With Coenzyme A.
pdb|2VU0|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
Oxidised Enzyme With Coenzyme A.
pdb|2VU0|D Chain D, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
Oxidised Enzyme With Coenzyme A.
pdb|2VU1|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of With O-
Pantheteine-11-Pivalate.
pdb|2VU1|B Chain B, Biosynthetic Thiolase From Z. Ramigera. Complex Of With O-
Pantheteine-11-Pivalate.
pdb|2VU1|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of With O-
Pantheteine-11-Pivalate.
pdb|2VU1|D Chain D, Biosynthetic Thiolase From Z. Ramigera. Complex Of With O-
Pantheteine-11-Pivalate
Length = 392
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAAA+L SE R G + IV + +T D K++
Sbjct: 239 GTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLG-RIV-------SWATVGVDP--KVM 288
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
G A+ L E+ K D+D++E ++ F+A + LG P
Sbjct: 289 GTGPIPASRKAL-ERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDP------------- 334
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
+VN +GG I+ GHP+GA+G
Sbjct: 335 -----SIVNVNGGAIAIGHPIGASG 354
>pdb|1QFL|A Chain A, Biosynthetic Thiolase From Zoogloea Ramigera In Complex
With A Reaction Intermediate.
pdb|1QFL|B Chain B, Biosynthetic Thiolase From Zoogloea Ramigera In Complex
With A Reaction Intermediate.
pdb|1QFL|C Chain C, Biosynthetic Thiolase From Zoogloea Ramigera In Complex
With A Reaction Intermediate.
pdb|1QFL|D Chain D, Biosynthetic Thiolase From Zoogloea Ramigera In Complex
With A Reaction Intermediate.
pdb|1DM3|A Chain A, Acetylated Biosynthetic Thiolase From Zoogloea Ramigera In
Complex With Acetyl-Coa
pdb|1DM3|B Chain B, Acetylated Biosynthetic Thiolase From Zoogloea Ramigera In
Complex With Acetyl-Coa
pdb|1DM3|C Chain C, Acetylated Biosynthetic Thiolase From Zoogloea Ramigera In
Complex With Acetyl-Coa
pdb|1DM3|D Chain D, Acetylated Biosynthetic Thiolase From Zoogloea Ramigera In
Complex With Acetyl-Coa
Length = 389
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAAA+L SE R G + IV + +T D K++
Sbjct: 236 GTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLG-RIV-------SWATVGVDP--KVM 285
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
G A+ L E+ K D+D++E ++ F+A + LG P
Sbjct: 286 GTGPIPASRKAL-ERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDP------------- 331
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
+VN +GG I+ GHP+GA+G
Sbjct: 332 -----SIVNVNGGAIAIGHPIGASG 351
>pdb|1M1O|A Chain A, Crystal Structure Of Biosynthetic Thiolase, C89a Mutant,
Complexed With Acetoacetyl-Coa
pdb|1M1O|B Chain B, Crystal Structure Of Biosynthetic Thiolase, C89a Mutant,
Complexed With Acetoacetyl-Coa
pdb|1M1O|C Chain C, Crystal Structure Of Biosynthetic Thiolase, C89a Mutant,
Complexed With Acetoacetyl-Coa
pdb|1M1O|D Chain D, Crystal Structure Of Biosynthetic Thiolase, C89a Mutant,
Complexed With Acetoacetyl-Coa
pdb|1M3K|A Chain A, Biosynthetic Thiolase, Inactive C89a Mutant
pdb|1M3K|B Chain B, Biosynthetic Thiolase, Inactive C89a Mutant
pdb|1M3K|C Chain C, Biosynthetic Thiolase, Inactive C89a Mutant
pdb|1M3K|D Chain D, Biosynthetic Thiolase, Inactive C89a Mutant
pdb|1M3Z|A Chain A, Biosynthetic Thiolase, C89a Mutant, Complexed With Acetyl
Coenzyme A
pdb|1M3Z|B Chain B, Biosynthetic Thiolase, C89a Mutant, Complexed With Acetyl
Coenzyme A
pdb|1M3Z|C Chain C, Biosynthetic Thiolase, C89a Mutant, Complexed With Acetyl
Coenzyme A
pdb|1M3Z|D Chain D, Biosynthetic Thiolase, C89a Mutant, Complexed With Acetyl
Coenzyme A
pdb|2VTZ|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
C89a Mutant With Coenzyme A.
pdb|2VTZ|B Chain B, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
C89a Mutant With Coenzyme A.
pdb|2VTZ|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
C89a Mutant With Coenzyme A.
pdb|2VTZ|D Chain D, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
C89a Mutant With Coenzyme A
Length = 392
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAAA+L SE R G + IV + +T D K++
Sbjct: 239 GTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLG-RIV-------SWATVGVDP--KVM 288
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
G A+ L E+ K D+D++E ++ F+A + LG P
Sbjct: 289 GTGPIPASRKAL-ERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDP------------- 334
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
+VN +GG I+ GHP+GA+G
Sbjct: 335 -----SIVNVNGGAIAIGHPIGASG 354
>pdb|1M1T|A Chain A, Biosynthetic Thiolase, Q64a Mutant
pdb|1M1T|B Chain B, Biosynthetic Thiolase, Q64a Mutant
pdb|1M1T|C Chain C, Biosynthetic Thiolase, Q64a Mutant
pdb|1M1T|D Chain D, Biosynthetic Thiolase, Q64a Mutant
Length = 392
Score = 43.5 bits (101), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAAA+L SE R G + IV + +T D K++
Sbjct: 239 GTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLG-RIV-------SWATVGVDP--KVM 288
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
G A+ L E+ K D+D++E ++ F+A + LG P
Sbjct: 289 GTGPIPASRKAL-ERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDP------------- 334
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
+VN +GG I+ GHP+GA+G
Sbjct: 335 -----SIVNVNGGAIAIGHPIGASG 354
>pdb|2WL6|A Chain A, Biosynthetic Thiolase From Z. Ramigera. The N316h-H348n
Mutant.
pdb|2WL6|B Chain B, Biosynthetic Thiolase From Z. Ramigera. The N316h-H348n
Mutant.
pdb|2WL6|C Chain C, Biosynthetic Thiolase From Z. Ramigera. The N316h-H348n
Mutant.
pdb|2WL6|D Chain D, Biosynthetic Thiolase From Z. Ramigera. The N316h-H348n
Mutant
Length = 392
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAAA+L SE R G + IV + +T D K++
Sbjct: 239 GTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLG-RIV-------SWATVGVDP--KVM 288
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
G A+ L E+ K D+D++E H+ F+A + LG P
Sbjct: 289 GTGPIPASRKAL-ERAGWKIGDLDLVEAHEAFAAQACAVNKDLGWDP------------- 334
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
+VN +GG I+ G+P+GA+G
Sbjct: 335 -----SIVNVNGGAIAIGNPIGASG 354
>pdb|2VU2|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex With S-
Pantetheine-11-pivalate.
pdb|2VU2|B Chain B, Biosynthetic Thiolase From Z. Ramigera. Complex With S-
Pantetheine-11-pivalate.
pdb|2VU2|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex With S-
Pantetheine-11-pivalate.
pdb|2VU2|D Chain D, Biosynthetic Thiolase From Z. Ramigera. Complex With S-
Pantetheine-11-pivalate
Length = 392
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAAA+L SE R G + IV + +T D K++
Sbjct: 239 GTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLG-RIV-------SWATVGVDP--KVM 288
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
G A+ L E+ K D+D++E ++ F+A + LG P
Sbjct: 289 GTGPIPASRKAL-ERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDP------------- 334
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
+VN +GG I+ GHP+GA+G
Sbjct: 335 -----SIVNVNGGAIAIGHPIGASG 354
>pdb|1DLU|A Chain A, Unliganded Biosynthetic Thiolase From Zoogloea Ramigera
pdb|1DLU|B Chain B, Unliganded Biosynthetic Thiolase From Zoogloea Ramigera
pdb|1DLU|C Chain C, Unliganded Biosynthetic Thiolase From Zoogloea Ramigera
pdb|1DLU|D Chain D, Unliganded Biosynthetic Thiolase From Zoogloea Ramigera
pdb|1DLV|A Chain A, Biosynthetic Thiolase From Zoogloea Ramigera In Complex
With Coa
pdb|1DLV|B Chain B, Biosynthetic Thiolase From Zoogloea Ramigera In Complex
With Coa
pdb|1DLV|C Chain C, Biosynthetic Thiolase From Zoogloea Ramigera In Complex
With Coa
pdb|1DLV|D Chain D, Biosynthetic Thiolase From Zoogloea Ramigera In Complex
With Coa
Length = 389
Score = 43.5 bits (101), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 64/145 (44%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAAA+L SE R G + IV + +T D K++
Sbjct: 236 GTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLG-RIV-------SWATVGVDP--KVM 285
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
G A+ L E+ K D+D++E ++ F+A + LG P
Sbjct: 286 GTGPIPASRKAL-ERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDP------------- 331
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
+VN +GG I+ GHP+GA+G
Sbjct: 332 -----SIVNVNGGAIAIGHPIGASG 351
>pdb|1AFW|A Chain A, The 1.8 Angstrom Crystal Structure Of The Dimeric
Peroxisomal Thiolase Of Saccharomyces Cerevisiae
pdb|1AFW|B Chain B, The 1.8 Angstrom Crystal Structure Of The Dimeric
Peroxisomal Thiolase Of Saccharomyces Cerevisiae
Length = 393
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 18/78 (23%)
Query: 138 AADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHV 197
A ++ E T ++ DID+ E+++ F+A L LG+ D +
Sbjct: 298 AIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGI-------DL-----------NK 339
Query: 198 VNPSGGLISKGHPLGATG 215
VNP GG I+ GHPLG TG
Sbjct: 340 VNPRGGAIALGHPLGCTG 357
>pdb|1PXT|A Chain A, The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoacyl-Coa
Thiolase Of Saccharomyces Cerevisiae: A Five Layered
A-B-A- B-A Structure, Constructed From Two Core Domains
Of Identical Topology
pdb|1PXT|B Chain B, The 2.8 Angstroms Structure Of Peroxisomal 3-Ketoacyl-Coa
Thiolase Of Saccharomyces Cerevisiae: A Five Layered
A-B-A- B-A Structure, Constructed From Two Core Domains
Of Identical Topology
Length = 390
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%), Gaps = 18/78 (23%)
Query: 138 AADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHV 197
A ++ E T ++ DID+ E+++ F+A L LG+ D +
Sbjct: 295 AIPKVLEATGLQVQDIDIFEINEAFAAQALYCIHKLGI-------DL-----------NK 336
Query: 198 VNPSGGLISKGHPLGATG 215
VNP GG I+ GHPLG TG
Sbjct: 337 VNPRGGAIALGHPLGCTG 354
>pdb|2WKV|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
N316d Mutant With Coenzyme A.
pdb|2WKV|B Chain B, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
N316d Mutant With Coenzyme A.
pdb|2WKV|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
N316d Mutant With Coenzyme A.
pdb|2WKV|D Chain D, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
N316d Mutant With Coenzyme A
Length = 392
Score = 42.7 bits (99), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAAA+L SE R G + IV + +T D K++
Sbjct: 239 GTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLG-RIV-------SWATVGVDP--KVM 288
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
G A+ L E+ K D+D++E + F+A + LG P
Sbjct: 289 GTGPIPASRKAL-ERAGWKIGDLDLVEADEAFAAQACAVNKDLGWDP------------- 334
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
+VN +GG I+ GHP+GA+G
Sbjct: 335 -----SIVNVNGGAIAIGHPIGASG 354
>pdb|2WL5|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
H348n Mutant With Coenzyme A.
pdb|2WL5|B Chain B, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
H348n Mutant With Coenzyme A
Length = 392
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAAA+L SE R G + IV + +T D K++
Sbjct: 239 GTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLG-RIV-------SWATVGVDP--KVM 288
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
G A+ L E+ K D+D++E ++ F+A + LG P
Sbjct: 289 GTGPIPASRKAL-ERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDP------------- 334
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
+VN +GG I+ G+P+GA+G
Sbjct: 335 -----SIVNVNGGAIAIGNPIGASG 354
>pdb|2WL5|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
H348n Mutant With Coenzyme A.
pdb|2WL5|D Chain D, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
H348n Mutant With Coenzyme A
Length = 392
Score = 40.8 bits (94), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 64/145 (44%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAAA+L SE R G + IV + +T D K++
Sbjct: 239 GTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLG-RIV-------SWATVGVDP--KVM 288
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
G A+ L E+ K D+D++E ++ F+A + LG P
Sbjct: 289 GTGPIPASRKAL-ERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDP------------- 334
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
+VN +GG I+ G+P+GA+G
Sbjct: 335 -----SIVNVNGGAIAIGNPIGASG 354
>pdb|2WL4|B Chain B, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
H348a Mutant With Coenzyme A
Length = 392
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAAA+L SE R G + IV + +T D K++
Sbjct: 239 GTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLG-RIV-------SWATVGVDP--KVM 288
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
G A+ L E+ K D+D++E ++ F+A + LG P
Sbjct: 289 GTGPIPASRKAL-ERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDP------------- 334
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
+VN +GG I+ G P+GA+G
Sbjct: 335 -----SIVNVNGGAIAIGAPIGASG 354
>pdb|2WL4|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
H348a Mutant With Coenzyme A
Length = 392
Score = 40.0 bits (92), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAAA+L SE R G + IV + +T D K++
Sbjct: 239 GTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLG-RIV-------SWATVGVDP--KVM 288
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
G A+ L E+ K D+D++E ++ F+A + LG P
Sbjct: 289 GTGPIPASRKAL-ERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDP------------- 334
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
+VN +GG I+ G P+GA+G
Sbjct: 335 -----SIVNVNGGAIAIGAPIGASG 354
>pdb|2WL4|D Chain D, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
H348a Mutant With Coenzyme A
Length = 392
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAAA+L SE R G + IV + +T D K++
Sbjct: 239 GTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLG-RIV-------SWATVGVDP--KVM 288
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
G A+ L E+ K D+D++E ++ F+A + LG P
Sbjct: 289 GTGPIPASRKAL-ERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDP------------- 334
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
+VN +GG I+ G P+GA+G
Sbjct: 335 -----SIVNVNGGAIAIGAPIGASG 354
>pdb|2WL4|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
H348a Mutant With Coenzyme A
Length = 392
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 63/145 (43%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAAA+L SE R G + IV + +T D K++
Sbjct: 239 GTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLG-RIV-------SWATVGVDP--KVM 288
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
G A+ L E+ K D+D++E ++ F+A + LG P
Sbjct: 289 GTGPIPASRKAL-ERAGWKIGDLDLVEANEAFAAQACAVNKDLGWDP------------- 334
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
+VN +GG I+ G P+GA+G
Sbjct: 335 -----SIVNVNGGAIAIGAPIGASG 354
>pdb|2IBU|A Chain A, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-coa Thiolase (t2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IBU|B Chain B, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-coa Thiolase (t2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IBU|C Chain C, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-coa Thiolase (t2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IBU|D Chain D, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-coa Thiolase (t2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IBW|A Chain A, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IBW|B Chain B, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IBW|C Chain C, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IBW|D Chain D, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IBY|A Chain A, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IBY|B Chain B, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IBY|C Chain C, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IBY|D Chain D, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
Length = 395
Score = 39.3 bits (90), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 31/146 (21%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAA VL + D +R A IV +D+ ++ I
Sbjct: 244 GTVTAANASTLNDGAAALVLMTADAAKRLNVTPLA-RIVAF-----------ADAAVEPI 291
Query: 131 GFDMTKA-AADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGA 189
F + AA + + +K DI + E+++ FS L + L + P
Sbjct: 292 DFPIAPVYAASMVLKDVGLKKEDIAMWEVNEAFSLVVLANIKMLEIDP------------ 339
Query: 190 NTYGGKHVVNPSGGLISKGHPLGATG 215
VN +GG +S GHP+G +G
Sbjct: 340 ------QKVNINGGAVSLGHPIGMSG 359
>pdb|2IIK|A Chain A, Crystal Structure Of Human Peroxisomal Acetyl-Coa Acyl
Transferase 1 (Acaa1)
pdb|2IIK|B Chain B, Crystal Structure Of Human Peroxisomal Acetyl-Coa Acyl
Transferase 1 (Acaa1)
Length = 418
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/135 (28%), Positives = 56/135 (41%), Gaps = 29/135 (21%)
Query: 81 TSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAAD 140
SDGAAA +LA RR E + I+G+ + + I IG A
Sbjct: 272 VSDGAAAILLA-----RRSKAEELGLPILGV---LRSYAVVGVPPDIMGIGPAYAIPVA- 322
Query: 141 RLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNP 200
+K + SD+D+ E+++ F++ E L L P VNP
Sbjct: 323 --LQKAGLTVSDVDIFEINEAFASQAAYCVEKLRLPP------------------EKVNP 362
Query: 201 SGGLISKGHPLGATG 215
GG ++ GHPLG TG
Sbjct: 363 LGGAVALGHPLGCTG 377
>pdb|2F2S|A Chain A, Human Mitochondrial Acetoacetyl-Coa Thiolase
pdb|2F2S|B Chain B, Human Mitochondrial Acetoacetyl-Coa Thiolase
pdb|2F2S|C Chain C, Human Mitochondrial Acetoacetyl-Coa Thiolase
pdb|2F2S|D Chain D, Human Mitochondrial Acetoacetyl-Coa Thiolase
Length = 406
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 31/146 (21%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAA VL + D +R A IV +D+ ++ I
Sbjct: 255 GTVTAANASTLNDGAAALVLMTADAAKRLNVTPLA-RIVAF-----------ADAAVEPI 302
Query: 131 GFDMTKA-AADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGA 189
F + AA + + +K DI + E+++ FS L + L + P
Sbjct: 303 DFPIAPVYAASMVLKDVGLKKEDIAMWEVNEAFSLVVLANIKMLEIDP------------ 350
Query: 190 NTYGGKHVVNPSGGLISKGHPLGATG 215
VN +GG +S GHP+G +G
Sbjct: 351 ------QKVNINGGAVSLGHPIGMSG 370
>pdb|2IB7|A Chain A, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IB7|B Chain B, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IB7|C Chain C, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IB7|D Chain D, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IB8|A Chain A, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IB8|B Chain B, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IB8|C Chain C, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IB8|D Chain D, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IB9|A Chain A, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IB9|B Chain B, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IB9|C Chain C, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
pdb|2IB9|D Chain D, Crystallographic And Kinetic Studies Of Human
Mitochondrial Acetoacetyl-Coa Thiolase (T2): The
Importance Of Potassium And Chloride For Its Structure
And Function
Length = 395
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 60/146 (41%), Gaps = 31/146 (21%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAA VL + D +R A IV +D+ ++ I
Sbjct: 244 GTVTAANASTLNDGAAALVLMTADAAKRLNVTPLA-RIVAF-----------ADAAVEPI 291
Query: 131 GFDMTKA-AADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGA 189
F + AA + + +K DI + E+++ FS L + L + P
Sbjct: 292 DFPIAPVYAASMVLKDVGLKKEDIAMWEVNEAFSLVVLANIKMLEIDP------------ 339
Query: 190 NTYGGKHVVNPSGGLISKGHPLGATG 215
VN +GG +S GHP+G +G
Sbjct: 340 ------QKVNINGGAVSLGHPIGMSG 359
>pdb|3SVK|A Chain A, Crystal Structure Of Acetyl-Coa Acetyltransferase From
Mycobacterium Avium
pdb|3SVK|B Chain B, Crystal Structure Of Acetyl-Coa Acetyltransferase From
Mycobacterium Avium
Length = 407
Score = 37.7 bits (86), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/133 (27%), Positives = 57/133 (42%), Gaps = 29/133 (21%)
Query: 83 DGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRL 142
DGAA ++ SE + G A IV ++T SD I L G A ++
Sbjct: 266 DGAALVLVGSEKAGKSQGLTPRA-RIV-------ATATSGSDPVIMLTG---PTPATRKV 314
Query: 143 YEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSG 202
++ + DID+ EL++ F++ L + L + +N +G
Sbjct: 315 LDRAGLTIDDIDLFELNEAFASVVLKFQKDLNIP------------------DEKLNVNG 356
Query: 203 GLISKGHPLGATG 215
G I+ GHPLGATG
Sbjct: 357 GAIAMGHPLGATG 369
>pdb|1WL4|A Chain A, Human Cytosolic Acetoacetyl-Coa Thiolase Complexed With
Coa
pdb|1WL5|A Chain A, Human Cytosolic Acetoacetyl-Coa Thiolase
Length = 397
Score = 35.8 bits (81), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 40/145 (27%), Positives = 56/145 (38%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAA VL + + G A IV + S + I I
Sbjct: 244 GTVTPANASGINDGAAAVVLMKKSEADKRGLTPLA-RIV-------SWSQVGVEPSIMGI 295
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
G A + K D+D+ E+++ F+A + LGL P
Sbjct: 296 G---PIPAIKQAVTKAGWSLEDVDIFEINEAFAAVSAAIVKELGLNP------------- 339
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
VN GG I+ GHPLGA+G
Sbjct: 340 -----EKVNIEGGAIALGHPLGASG 359
>pdb|2WKT|A Chain A, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
N316a Mutant With Coenzyme A.
pdb|2WKT|B Chain B, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
N316a Mutant With Coenzyme A.
pdb|2WKT|D Chain D, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
N316a Mutant With Coenzyme A
Length = 392
Score = 35.8 bits (81), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAAA+L SE R G + IV + +T D K++
Sbjct: 239 GTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLG-RIV-------SWATVGVDP--KVM 288
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
G A+ L E+ K D+D++E + F+A + LG P
Sbjct: 289 GTGPIPASRKAL-ERAGWKIGDLDLVEAAEAFAAQACAVNKDLGWDP------------- 334
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
+VN +GG I+ GHP+GA+G
Sbjct: 335 -----SIVNVNGGAIAIGHPIGASG 354
>pdb|2WKT|C Chain C, Biosynthetic Thiolase From Z. Ramigera. Complex Of The
N316a Mutant With Coenzyme A
Length = 392
Score = 35.4 bits (80), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 63/145 (43%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAAA+L SE R G + IV + +T D K++
Sbjct: 239 GTVTAGNASGLNDGAAAALLMSEAEASRRGIQPLG-RIV-------SWATVGVDP--KVM 288
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
G A+ L E+ K D+D++E + F+A + LG P
Sbjct: 289 GTGPIPASRKAL-ERAGWKIGDLDLVEAAEAFAAQACAVNKDLGWDP------------- 334
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
+VN +GG I+ GHP+GA+G
Sbjct: 335 -----SIVNVNGGAIAIGHPIGASG 354
>pdb|2WU9|A Chain A, Crystal Structure Of Peroxisomal Kat2 From Arabidopsis
Thaliana
pdb|2WU9|B Chain B, Crystal Structure Of Peroxisomal Kat2 From Arabidopsis
Thaliana
Length = 442
Score = 35.0 bits (79), Expect = 0.034, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 53/135 (39%), Gaps = 29/135 (21%)
Query: 81 TSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAAD 140
SDGA A +L + G V T + D I IG + AA
Sbjct: 274 VSDGAGAVLLMKRSVAMQKGLPVLGV--------FRTFAAVGVDPAIMGIGPAVAIPAA- 324
Query: 141 RLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNP 200
+ ++ DID+ E+++ F++ + LGL P +N
Sbjct: 325 --VKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDP------------------EKINV 364
Query: 201 SGGLISKGHPLGATG 215
+GG ++ GHPLGATG
Sbjct: 365 NGGAMAIGHPLGATG 379
>pdb|2C7Y|A Chain A, Plant Enzyme
pdb|2C7Y|B Chain B, Plant Enzyme
pdb|2C7Z|A Chain A, Plant Enzyme Crystal Form Ii
Length = 404
Score = 34.7 bits (78), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 35/135 (25%), Positives = 53/135 (39%), Gaps = 29/135 (21%)
Query: 81 TSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAAD 140
SDGA A +L + G V T + D I IG + AA
Sbjct: 257 VSDGAGAVLLMKRSVAMQKGLPVLGV--------FRTFAAVGVDPAIMGIGPAVAIPAA- 307
Query: 141 RLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNP 200
+ ++ DID+ E+++ F++ + LGL P +N
Sbjct: 308 --VKAAGLELDDIDLFEINEAFASQFVYCRNKLGLDP------------------EKINV 347
Query: 201 SGGLISKGHPLGATG 215
+GG ++ GHPLGATG
Sbjct: 348 NGGAMAIGHPLGATG 362
>pdb|1WDK|C Chain C, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDK|D Chain D, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native2)
pdb|1WDL|C Chain C, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDL|D Chain D, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form Ii (Native4)
pdb|1WDM|C Chain C, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|1WDM|D Chain D, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form I (Native3)
pdb|2D3T|C Chain C, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
pdb|2D3T|D Chain D, Fatty Acid Beta-Oxidation Multienzyme Complex From
Pseudomonas Fragi, Form V
Length = 390
Score = 34.7 bits (78), Expect = 0.038, Method: Compositional matrix adjust.
Identities = 44/169 (26%), Positives = 68/169 (40%), Gaps = 28/169 (16%)
Query: 47 TNNPNSQFQVEYTLEQIMNSPKIFGPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAV 106
T P++ + L+ N PK G +T +DGA+ ++ S + G E AV
Sbjct: 212 TIRPDTTLESLAALKPAFN-PK-GGTVTAGTSSQITDGASCMIVMSAQRAKDLGLEPLAV 269
Query: 107 EIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANE 166
+ + D I +G+ A L ++ + +DID IEL++ F+A
Sbjct: 270 --------IRSMAVAGVDPAI--MGYGPVPATQKAL-KRAGLNMADIDFIELNEAFAAQA 318
Query: 167 LITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
L PV K +D VN GG I+ GHP G +G
Sbjct: 319 L---------PVLKDLKVLDKM------NEKVNLHGGAIALGHPFGCSG 352
>pdb|3SS6|A Chain A, Crystal Structure Of The Bacillus Anthracis Acetyl-Coa
Acetyltransferase
pdb|3SS6|B Chain B, Crystal Structure Of The Bacillus Anthracis Acetyl-Coa
Acetyltransferase
Length = 394
Score = 34.3 bits (77), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 58/145 (40%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DG+A VL SE+ + G + A IVG +A D I I
Sbjct: 241 GSVTAGNASGLNDGSAVLVLMSEEKAKEKGLQPLA-RIVGYSVA-------GVDPKIMGI 292
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
G A + EK D D++E+++ F+A L + L L
Sbjct: 293 G---PAPAIRKGLEKVDWSLEDADLLEINEAFAAQYLAVEKELDL--------------- 334
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
+ VN +G + GHP+G TG
Sbjct: 335 ---DREKVNVNGSGVGLGHPIGCTG 356
>pdb|4E1L|A Chain A, Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla2) From
Clostridium Difficile
pdb|4E1L|B Chain B, Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla2) From
Clostridium Difficile
pdb|4E1L|C Chain C, Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla2) From
Clostridium Difficile
pdb|4E1L|D Chain D, Crystal Structure Of Acetoacetyl-Coa Thiolase (Thla2) From
Clostridium Difficile
Length = 395
Score = 34.3 bits (77), Expect = 0.055, Method: Compositional matrix adjust.
Identities = 24/78 (30%), Positives = 37/78 (47%), Gaps = 18/78 (23%)
Query: 138 AADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHV 197
A + +K + +DID+IE ++ F+A L L IDS
Sbjct: 299 ATRKALKKAGLSINDIDLIEANEAFAAQALAVKNELQ----------IDSSK-------- 340
Query: 198 VNPSGGLISKGHPLGATG 215
+N +GG I+ GHP+GA+G
Sbjct: 341 LNVNGGAIALGHPIGASG 358
>pdb|4DD5|A Chain A, Biosynthetic Thiolase (Thla1) From Clostridium Difficile
Length = 396
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/146 (25%), Positives = 60/146 (41%), Gaps = 31/146 (21%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTS-STFNSDSCIKL 129
G +T +DGAA V+ +++ G E +AT S T D K+
Sbjct: 244 GTVTAGNASGINDGAAMLVVMAKEKAEELGIE---------PLATIVSYGTAGVDP--KI 292
Query: 130 IGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGA 189
+G+ A L E + DID++E ++ F+A + L + D
Sbjct: 293 MGYGPVPATKKAL-EAANMTIEDIDLVEANEAFAAQSVAVIRDLNI-------DM----- 339
Query: 190 NTYGGKHVVNPSGGLISKGHPLGATG 215
+ VN +GG I+ GHP+G +G
Sbjct: 340 ------NKVNVNGGAIAIGHPIGCSG 359
>pdb|1JNY|A Chain A, Crystal Structure Of Sulfolobus Solfataricus Elongation
Factor 1 Alpha In Complex With Gdp
pdb|1JNY|B Chain B, Crystal Structure Of Sulfolobus Solfataricus Elongation
Factor 1 Alpha In Complex With Gdp
pdb|1SKQ|A Chain A, The Crystal Structure Of Sulfolobus Solfataricus
Elongation Factor 1-Alpha In Complex With Magnesium And
Gdp
pdb|1SKQ|B Chain B, The Crystal Structure Of Sulfolobus Solfataricus
Elongation Factor 1-Alpha In Complex With Magnesium And
Gdp
Length = 435
Score = 31.2 bits (69), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 27/113 (23%), Positives = 48/113 (42%), Gaps = 18/113 (15%)
Query: 95 FVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDID 154
F+R YGF N V V + + + T S++ G + ++ ++ P +D
Sbjct: 176 FMRSYGFNTNKVRFVPVVAPSGDNITHKSENMKWYNG-----PTLEEYLDQLELPPKPVD 230
Query: 155 ---VIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGGL 204
I + D +S + +G PVG+ ++SG G K V P+G +
Sbjct: 231 KPLRIPIQDVYSIS------GVGTVPVGR----VESGVLKVGDKIVFMPAGKV 273
>pdb|2WUA|A Chain A, Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolase From
Sunflower
pdb|2WUA|B Chain B, Structure Of The Peroxisomal 3-Ketoacyl-Coa Thiolase From
Sunflower
Length = 440
Score = 30.8 bits (68), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 18/64 (28%), Positives = 31/64 (48%), Gaps = 18/64 (28%)
Query: 152 DIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPL 211
DID+ E+++ F++ + + L + P +N +GG ++ GHPL
Sbjct: 337 DIDLFEINEAFASQFVYCQKKLEIDP------------------QKINVNGGAMAIGHPL 378
Query: 212 GATG 215
GATG
Sbjct: 379 GATG 382
>pdb|1I83|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
N1,N14-Bis((S-Methyl)isothioureido)tetradecane (H4b
Free)
pdb|1I83|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
N1,N14-Bis((S-Methyl)isothioureido)tetradecane (H4b
Free)
Length = 444
Score = 30.4 bits (67), Expect = 0.74, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 75 KLQCCPTSDGAAAAVLASE--DFVRRY-------GFEANAVEIVGLEMATDTSSTFNSDS 125
KLQ P+ A L S+ DF+ +Y G +A+ + +E ++ T++
Sbjct: 72 KLQTRPSPGPPPAEQLLSQARDFINQYYSSIKRSGSQAHEERLQEVEAEVASTGTYHLRE 131
Query: 126 CIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITY 170
+ G A R + Q + V + DC SA E+ TY
Sbjct: 132 SELVFGAKQAWRNAPRCVGRIQW--GKLQVFDARDCSSAQEMFTY 174
>pdb|3E7S|B Chain B, Structure Of Bovine Enos Oxygenase Domain With Inhibitor
Ar- C95791
Length = 431
Score = 30.4 bits (67), Expect = 0.79, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 75 KLQCCPTSDGAAAAVLASE--DFVRRY-------GFEANAVEIVGLEMATDTSSTFNSDS 125
KLQ P+ A L S+ DF+ +Y G +A+ + +E ++ T++
Sbjct: 54 KLQTRPSPGPPPAEQLLSQARDFINQYYSSIKRSGSQAHEERLQEVEAEVASTGTYHLRE 113
Query: 126 CIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITY 170
+ G A R + Q + V + DC SA E+ TY
Sbjct: 114 SELVFGAKQAWRNAPRCVGRIQW--GKLQVFDARDCSSAQEMFTY 156
>pdb|1NSE|A Chain A, Bovine Endothelial Nitric Oxide Synthase
pdb|1NSE|B Chain B, Bovine Endothelial Nitric Oxide Synthase
pdb|2NSE|A Chain A, Bovine Endothelial Nitric Oxide Synthase Substrate Complex
pdb|2NSE|B Chain B, Bovine Endothelial Nitric Oxide Synthase Substrate Complex
pdb|3NSE|A Chain A, Bovine Enos, H4b-Free, Seitu Complex
pdb|3NSE|B Chain B, Bovine Enos, H4b-Free, Seitu Complex
pdb|4NSE|A Chain A, Bovine Endothelial Nitric Oxide Synthase, H4b-Free, L-Arg
Complex
pdb|4NSE|B Chain B, Bovine Endothelial Nitric Oxide Synthase, H4b-Free, L-Arg
Complex
pdb|1D1W|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 2- Aminothiazoline (h4b Bound)
pdb|1D1W|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 2- Aminothiazoline (h4b Bound)
pdb|1ED4|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With Ipitu (H4b Free)
pdb|1ED4|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With Ipitu (H4b Free)
pdb|9NSE|A Chain A, Bovine Endothelial Nitric Oxide Synthase,
Ethyl-Isoselenourea Complex
pdb|9NSE|B Chain B, Bovine Endothelial Nitric Oxide Synthase,
Ethyl-Isoselenourea Complex
pdb|1DMI|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 6s-H4b
pdb|1DMI|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 6s-H4b
pdb|1DMJ|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 5, 6-cyclic-tetrahydropteridine
pdb|1DMJ|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 5, 6-cyclic-tetrahydropteridine
pdb|1DMK|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 4- Amino-6-Phenyl-Tetrahydropteridine
pdb|1DMK|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 4- Amino-6-Phenyl-Tetrahydropteridine
pdb|1DM6|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With N- (4-Chlorophenyl)-N'-Hydroxyguanidine
(H4b Free)
pdb|1DM6|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With N- (4-Chlorophenyl)-N'-Hydroxyguanidine
(H4b Free)
pdb|1DM7|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With Homoarginine (H4b Free)
pdb|1DM7|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With Homoarginine (H4b Free)
pdb|1DM8|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 1, 2,4-Triazole-Carboxamidine (H4b Bound)
pdb|1DM8|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 1, 2,4-Triazole-Carboxamidine (H4b Bound)
pdb|1ED5|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With Nna(H4b Free)
pdb|1ED5|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With Nna(H4b Free)
pdb|1ED6|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With L- Nio (H4b Free)
pdb|1ED6|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With L- Nio (H4b Free)
pdb|1D1V|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With S- Ethyl-N-Phenyl-Isothiourea (H4b Bound)
pdb|1D1V|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With S- Ethyl-N-Phenyl-Isothiourea (H4b Bound)
pdb|1D1X|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 1, 4-Pbitu (H4b Bound)
pdb|1D1X|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 1, 4-Pbitu (H4b Bound)
pdb|1D1Y|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 1, 3-Pbitu (H4b Free)
pdb|1D1Y|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 1, 3-Pbitu (H4b Free)
pdb|1FOI|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 1400w(H4b-Free)
pdb|1FOI|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 1400w(H4b-Free)
pdb|1FOL|A Chain A, Reduced Bovine Endothelial Nitric Oxide Synthase Heme
Domain Complexed With L-Arg(H4b-Free)
pdb|1FOL|B Chain B, Reduced Bovine Endothelial Nitric Oxide Synthase Heme
Domain Complexed With L-Arg(H4b-Free)
pdb|1FOO|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With L- Arg And No(H4b-Free)
pdb|1FOO|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With L- Arg And No(H4b-Free)
pdb|1FOP|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With L- Arg And No(H4b-Bound)
pdb|1FOP|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With L- Arg And No(H4b-Bound)
pdb|1FOJ|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 7- Nitroindazole-2-carboxamidine (h4b
Present)
pdb|1FOJ|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 7- Nitroindazole-2-carboxamidine (h4b
Present)
pdb|8NSE|A Chain A, Bovine Endothelial Nitric Oxide Synthase, Nna Complex
pdb|8NSE|B Chain B, Bovine Endothelial Nitric Oxide Synthase, Nna Complex
pdb|1D0O|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 3- Bromo-7-Nitroindazole (H4b Present)
pdb|1D0O|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 3- Bromo-7-Nitroindazole (H4b Present)
pdb|1D0C|A Chain A, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 3- Bromo-7-Nitroindazole (H4b Free)
pdb|1D0C|B Chain B, Bovine Endothelial Nitric Oxide Synthase Heme Domain
Complexed With 3- Bromo-7-Nitroindazole (H4b Free)
pdb|5NSE|A Chain A, Bovine Endothelial Nitric Oxide Synthase, H4b-free,
Hydroxy-arg Complex
pdb|5NSE|B Chain B, Bovine Endothelial Nitric Oxide Synthase, H4b-free,
Hydroxy-arg Complex
pdb|6NSE|A Chain A, Bovine Endothelial Nitric Oxide Synthase, H4b-Free,
Canavanine Complex
pdb|6NSE|B Chain B, Bovine Endothelial Nitric Oxide Synthase, H4b-Free,
Canavanine Complex
pdb|7NSE|A Chain A, Bovine Endothelial Nitric Oxide Synthase, H4b-Free, Adma
Complex
pdb|7NSE|B Chain B, Bovine Endothelial Nitric Oxide Synthase, H4b-Free, Adma
Complex
pdb|3JWW|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
C With
N1-[(3's,4's)-4'-((6"-Amino-4"-Methylpyridin-2"-Yl)met
Pyrrolidin-3'-Yl]-N2-
(3'-Fluorophenethyl)ethane-1,2-Diamin Tetrahydrochloride
pdb|3JWW|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
C With
N1-[(3's,4's)-4'-((6"-Amino-4"-Methylpyridin-2"-Yl)met
Pyrrolidin-3'-Yl]-N2-
(3'-Fluorophenethyl)ethane-1,2-Diamin Tetrahydrochloride
pdb|3JWX|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
C With
N1-[(3'r,4'r)-4'-((6"-Amino-4"-Methylpyridin-2"-Yl)met
Pyrrolidin-3'-Yl]-N2-(3'-Fluorophenethyl)ethane-1,
2-Diamine Tetrahydrochloride
pdb|3JWX|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
C With
N1-[(3'r,4'r)-4'-((6"-Amino-4"-Methylpyridin-2"-Yl)met
Pyrrolidin-3'-Yl]-N2-(3'-Fluorophenethyl)ethane-1,
2-Diamine Tetrahydrochloride
pdb|3JWY|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
C With
N1-{(3'r,4's)-4'-[(6"-Amino-4"-Methylpyridin-2"-Yl)
Methyl]pyrrolidin-3'-Yl}-N2-(3'-Fluorophenethyl)ethane-
1,2- Tetrahydrochloride
pdb|3JWY|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
C With
N1-{(3'r,4's)-4'-[(6"-Amino-4"-Methylpyridin-2"-Yl)
Methyl]pyrrolidin-3'-Yl}-N2-(3'-Fluorophenethyl)ethane-
1,2- Tetrahydrochloride
pdb|3JWZ|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
C With N1-[(3' S,4'
R)-4'-((6"-Amino-4"-Methylpyridin-2"-Yl)m
Pyrrolidin-3'-Yl]-N2-(3'-Fluorophenethyl)ethane-1,
2-Diamine Tetrahydrochloride
pdb|3JWZ|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
C With N1-[(3' S,4'
R)-4'-((6"-Amino-4"-Methylpyridin-2"-Yl)m
Pyrrolidin-3'-Yl]-N2-(3'-Fluorophenethyl)ethane-1,
2-Diamine Tetrahydrochloride
pdb|3NLD|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6-{{(3's,4's)-3'-[2"-(3'''-Fluorophenethylamino)
Ethoxy]pyrrolidin-4'-Yl}methyl}-4-Methylpyridin-2-Amine
pdb|3NLD|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6-{{(3's,4's)-3'-[2"-(3'''-Fluorophenethylamino)
Ethoxy]pyrrolidin-4'-Yl}methyl}-4-Methylpyridin-2-Amine
pdb|3NLE|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6-{{(3'r,4'r)-3'-[2"-(3'''-Fluorophenethylamino)
Ethoxy]pyrrolidin-4'-Yl}methyl}-4-Methylpyridin-2-Amine
pdb|3NLE|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6-{{(3'r,4'r)-3'-[2"-(3'''-Fluorophenethylamino)
Ethoxy]pyrrolidin-4'-Yl}methyl}-4-Methylpyridin-2-Amine
pdb|3NLF|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6-{{(3'r,4's)-3'-[2"-(3'''-Fluorophenethylamino)
Ethoxy]pyrrolidin-4'-Yl}methyl}-4-Methylpyridin-2-Amine
pdb|3NLF|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6-{{(3'r,4's)-3'-[2"-(3'''-Fluorophenethylamino)
Ethoxy]pyrrolidin-4'-Yl}methyl}-4-Methylpyridin-2-Amine
pdb|3NLG|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6-{{(3's,4'r)-3'-[2"-(3'''-Fluorophenethylamino)
Ethoxy]pyrrolidin-4'-Yl}methyl}-4-Methylpyridin-2-Amine
pdb|3NLG|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6-{{(3's,4'r)-3'-[2"-(3'''-Fluorophenethylamino)
Ethoxy]pyrrolidin-4'-Yl}methyl}-4-Methylpyridin-2-Amine
pdb|3NLT|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
N1-{(3's,4's)-4'-[(6"-Amino-4"-Methylpyridin-2"-Yl)
Methyl]pyrrolidin-3'-Yl}-
N2-(3'-Fluorophenethyl)ethane-1,2-Diamine
Tetrahydrochloride
pdb|3NLT|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
N1-{(3's,4's)-4'-[(6"-Amino-4"-Methylpyridin-2"-Yl)
Methyl]pyrrolidin-3'-Yl}-
N2-(3'-Fluorophenethyl)ethane-1,2-Diamine
Tetrahydrochloride
pdb|3NLU|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
N1-{(3'r,4'r)-4'-[(6"-Amino-4"-Methylpyridin-2"-Yl)
Methyl]pyrrolidin-3'-Yl}-N2-(3'-Fluorophenethyl)ethane-
1,2-Diamine Tetrahydrochloride
pdb|3NLU|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
N1-{(3'r,4'r)-4'-[(6"-Amino-4"-Methylpyridin-2"-Yl)
Methyl]pyrrolidin-3'-Yl}-N2-(3'-Fluorophenethyl)ethane-
1,2-Diamine Tetrahydrochloride
pdb|3N5P|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
4-(2-(6-(2-(6-Amino-4-Methylpyridin-2-Yl)ethyl)pyridin-
2-Yl) Ethyl)-6-Methylpyridin-2-Amine
pdb|3N5P|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
4-(2-(6-(2-(6-Amino-4-Methylpyridin-2-Yl)ethyl)pyridin-
2-Yl) Ethyl)-6-Methylpyridin-2-Amine
pdb|3N5Q|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6,6'-(2,2'-(5-Amino-1,3-Phenylene)bis(Ethane-2,
1-Diyl))bis(4- Methylpyridin-2-Amine)
pdb|3N5Q|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6,6'-(2,2'-(5-Amino-1,3-Phenylene)bis(Ethane-2,
1-Diyl))bis(4- Methylpyridin-2-Amine)
pdb|3N5R|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
4-(3-(2-(6-Amino-4-Methylpyridin-2-Yl)ethyl)phenethyl)-
6- Methylpyridin-2-Amine
pdb|3N5R|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
4-(3-(2-(6-Amino-4-Methylpyridin-2-Yl)ethyl)phenethyl)-
6- Methylpyridin-2-Amine
pdb|3N5S|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
4-(2-(5-(2-(6-Amino-4-Methylpyridin-2-Yl)ethyl)pyridin-
3-Yl) Ethyl)-6-Methylpyridin-2-Amine
pdb|3N5S|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
4-(2-(5-(2-(6-Amino-4-Methylpyridin-2-Yl)ethyl)pyridin-
3-Yl) Ethyl)-6-Methylpyridin-2-Amine
pdb|3N5T|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6,6'-(2,2'-(Pyridine-3,5-Diyl)bis(Ethane-2,
1-Diyl))bis(4- Methylpyridin-2-Amine)
pdb|3N5T|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
Complexed With
6,6'-(2,2'-(Pyridine-3,5-Diyl)bis(Ethane-2,
1-Diyl))bis(4- Methylpyridin-2-Amine)
Length = 444
Score = 30.4 bits (67), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 75 KLQCCPTSDGAAAAVLASE--DFVRRY-------GFEANAVEIVGLEMATDTSSTFNSDS 125
KLQ P+ A L S+ DF+ +Y G +A+ + +E ++ T++
Sbjct: 72 KLQTRPSPGPPPAEQLLSQARDFINQYYSSIKRSGSQAHEERLQEVEAEVASTGTYHLRE 131
Query: 126 CIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITY 170
+ G A R + Q + V + DC SA E+ TY
Sbjct: 132 SELVFGAKQAWRNAPRCVGRIQW--GKLQVFDARDCSSAQEMFTY 174
>pdb|3RQO|A Chain A, Structure Of The Endothelial Nitric Oxide Synthase Heme
Domain In Complex With
6-(((3r,4r)-4-(2-((1s,2r1R,2S)-2-(3-Clorophenyl)
Cyclopropylamino)ethoxy)pyrrolidin-3-Yl)methyl)-4-
Methylpyridin-2- Amine
pdb|3RQO|B Chain B, Structure Of The Endothelial Nitric Oxide Synthase Heme
Domain In Complex With
6-(((3r,4r)-4-(2-((1s,2r1R,2S)-2-(3-Clorophenyl)
Cyclopropylamino)ethoxy)pyrrolidin-3-Yl)methyl)-4-
Methylpyridin-2- Amine
pdb|3RQP|A Chain A, Structure Of The Endothelial Nitric Oxide Synthase Heme
Domain In Complex With
6-{[(3r,4r)-4-(2-{[(2r2S)-1-(3-Fluorophenyl)propan-2-
Yl]amino}ethoxy)pyrrolidin-3-Yl]methyl}-4-Methylpyridin-
2-Amine
pdb|3RQP|B Chain B, Structure Of The Endothelial Nitric Oxide Synthase Heme
Domain In Complex With
6-{[(3r,4r)-4-(2-{[(2r2S)-1-(3-Fluorophenyl)propan-2-
Yl]amino}ethoxy)pyrrolidin-3-Yl]methyl}-4-Methylpyridin-
2-Amine
Length = 443
Score = 30.4 bits (67), Expect = 0.83, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 75 KLQCCPTSDGAAAAVLASE--DFVRRY-------GFEANAVEIVGLEMATDTSSTFNSDS 125
KLQ P+ A L S+ DF+ +Y G +A+ + +E ++ T++
Sbjct: 71 KLQTRPSPGPPPAEQLLSQARDFINQYYSSIKRSGSQAHEERLQEVEAEVASTGTYHLRE 130
Query: 126 CIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITY 170
+ G A R + Q + V + DC SA E+ TY
Sbjct: 131 SELVFGAKQAWRNAPRCVGRIQW--GKLQVFDARDCSSAQEMFTY 173
>pdb|3N67|A Chain A, Structure Of Endothelial Nitric Oxide Synthase N368dV106M
DOUBLE Mutant Heme Domain Complexed With
6,6'-(2,2'-(5-Amino-1,3-Phenylene)
Bis(Ethane-2,1-Diyl))bis(4-Methylpyridin-2-Amine)
pdb|3N67|B Chain B, Structure Of Endothelial Nitric Oxide Synthase N368dV106M
DOUBLE Mutant Heme Domain Complexed With
6,6'-(2,2'-(5-Amino-1,3-Phenylene)
Bis(Ethane-2,1-Diyl))bis(4-Methylpyridin-2-Amine)
pdb|3N68|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
N368dV106M Double Mutant Complexed With
4-(3-(2-(6-Amino-4-Methylpyridin-2-Yl)
Ethyl)phenethyl)-6-Methylpyridin-2-Amine
pdb|3N68|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
N368dV106M Double Mutant Complexed With
4-(3-(2-(6-Amino-4-Methylpyridin-2-Yl)
Ethyl)phenethyl)-6-Methylpyridin-2-Amine
pdb|3N69|A Chain A, Structure Of Endothelial Nitric Oxide Synthase N368dV106M
DOUBLE Mutant Heme Domain Complexed With
6,6'-(2,2'-(Pyridine-3,5-Diyl)
Bis(Ethane-2,1-Diyl))bis(4-Methylpyridin-2-Amine)
pdb|3N69|B Chain B, Structure Of Endothelial Nitric Oxide Synthase N368dV106M
DOUBLE Mutant Heme Domain Complexed With
6,6'-(2,2'-(Pyridine-3,5-Diyl)
Bis(Ethane-2,1-Diyl))bis(4-Methylpyridin-2-Amine)
pdb|3N6A|A Chain A, Structure Of Endothelial Nitric Oxide Synthase N368dV106M
DOUBLE Mutant Heme Domain Complexed With
4-(2-(5-(2-(6-Amino-4-
Methylpyridin-2-Yl)ethyl)pyridin-3-Yl)ethyl)-6-
Methylpyridin-2-Amine
pdb|3N6A|B Chain B, Structure Of Endothelial Nitric Oxide Synthase N368dV106M
DOUBLE Mutant Heme Domain Complexed With
4-(2-(5-(2-(6-Amino-4-
Methylpyridin-2-Yl)ethyl)pyridin-3-Yl)ethyl)-6-
Methylpyridin-2-Amine
Length = 444
Score = 30.4 bits (67), Expect = 0.86, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 75 KLQCCPTSDGAAAAVLASE--DFVRRY-------GFEANAVEIVGLEMATDTSSTFNSDS 125
KLQ P+ A L S+ DF+ +Y G +A+ + +E ++ T++
Sbjct: 72 KLQTRPSPGPPPAEQLLSQARDFINQYYSSIKRSGSQAHEERLQEVEAEVASTGTYHLRE 131
Query: 126 CIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITY 170
+ G A R + Q + V + DC SA E+ TY
Sbjct: 132 SELVFGAKQAWRNAPRCVGRIQW--GKLQVFDARDCSSAQEMFTY 174
>pdb|3N6B|A Chain A, Structure Of Endothelial Nitric Oxide Synthase H373s
Single Mutant Heme Domain Complexed With
6,6'-(2,2'-(Pyridine-3,5-Diyl)bis(Ethane-
2,1-Diyl))bis(4-Methylpyridin-2-Amine)
pdb|3N6B|B Chain B, Structure Of Endothelial Nitric Oxide Synthase H373s
Single Mutant Heme Domain Complexed With
6,6'-(2,2'-(Pyridine-3,5-Diyl)bis(Ethane-
2,1-Diyl))bis(4-Methylpyridin-2-Amine)
pdb|3N6C|A Chain A, Structure Of Endothelial Nitric Oxide Synthase H373s
Single Mutant Heme Domain Complexed With
4-(2-(6-(2-(6-Amino-4-Methylpyridin-2-Yl)
Ethyl)pyridin-2-Yl)ethyl)-6-Methylpyridin-2-Amine
pdb|3N6C|B Chain B, Structure Of Endothelial Nitric Oxide Synthase H373s
Single Mutant Heme Domain Complexed With
4-(2-(6-(2-(6-Amino-4-Methylpyridin-2-Yl)
Ethyl)pyridin-2-Yl)ethyl)-6-Methylpyridin-2-Amine
pdb|3N6D|A Chain A, Structure Of Endothelial Nitric Oxide Synthase H373s
Single Mutant Heme Domain Complexed With
6,6'-(2,2'-(5-Amino-1,3-Phenylene)
Bis(Ethane-2,1-Diyl))bis(4-Methylpyridin-2-Amine)
pdb|3N6D|B Chain B, Structure Of Endothelial Nitric Oxide Synthase H373s
Single Mutant Heme Domain Complexed With
6,6'-(2,2'-(5-Amino-1,3-Phenylene)
Bis(Ethane-2,1-Diyl))bis(4-Methylpyridin-2-Amine)
Length = 444
Score = 30.0 bits (66), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 75 KLQCCPTSDGAAAAVLASE--DFVRRY-------GFEANAVEIVGLEMATDTSSTFNSDS 125
KLQ P+ A L S+ DF+ +Y G +A+ + +E ++ T++
Sbjct: 72 KLQTRPSPGPPPAEQLLSQARDFINQYYSSIKRSGSQAHEERLQEVEAEVASTGTYHLRE 131
Query: 126 CIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITY 170
+ G A R + Q + V + DC SA E+ TY
Sbjct: 132 SELVFGAKQAWRNAPRCVGRIQW--GKLQVFDARDCSSAQEMFTY 174
>pdb|3NLH|A Chain A, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
N368d Mutant Complexed With 6-{{(3's,4's)-3'-[2"-(3'''-
Fluorophenethylamino)ethoxy]pyrrolidin-4'-Yl}methyl}-4-
Methylpyridin- 2-Amine
pdb|3NLH|B Chain B, Structure Of Endothelial Nitric Oxide Synthase Heme Domain
N368d Mutant Complexed With 6-{{(3's,4's)-3'-[2"-(3'''-
Fluorophenethylamino)ethoxy]pyrrolidin-4'-Yl}methyl}-4-
Methylpyridin- 2-Amine
pdb|3NLI|A Chain A, Structure Of Endothelial Nitric Oxide Synthase N368d
Mutant Heme Domain Complexed With
6-{{(3'r,4'r)-3'-[2"-(3'''-
Fluorophenethylamino)ethoxy]pyrrolidin-4'-Yl}methyl}-4-
Methylpyridin- 2-Amine
pdb|3NLI|B Chain B, Structure Of Endothelial Nitric Oxide Synthase N368d
Mutant Heme Domain Complexed With
6-{{(3'r,4'r)-3'-[2"-(3'''-
Fluorophenethylamino)ethoxy]pyrrolidin-4'-Yl}methyl}-4-
Methylpyridin- 2-Amine
pdb|3N6E|A Chain A, Structure Of Endothelial Nitric Oxide Synthase N368d
Mutant Heme Domain Complexed With
6,6'-(2,2'-(5-Amino-1,3-Phenylene)bis(Ethane-2,
1-Diyl))bis(4-Methylpyridin-2-Amine)
pdb|3N6E|B Chain B, Structure Of Endothelial Nitric Oxide Synthase N368d
Mutant Heme Domain Complexed With
6,6'-(2,2'-(5-Amino-1,3-Phenylene)bis(Ethane-2,
1-Diyl))bis(4-Methylpyridin-2-Amine)
pdb|3N6F|A Chain A, Structure Of Endothelial Nitric Oxide Synthase N368d
Single Mutant Heme Domain Complexed With
6,6'-(2,2'-(Pyridine-3,5-Diyl)bis(Ethane-
2,1-Diyl))bis(4-Methylpyridin-2-Amine)
pdb|3N6F|B Chain B, Structure Of Endothelial Nitric Oxide Synthase N368d
Single Mutant Heme Domain Complexed With
6,6'-(2,2'-(Pyridine-3,5-Diyl)bis(Ethane-
2,1-Diyl))bis(4-Methylpyridin-2-Amine)
pdb|3N6G|A Chain A, Structure Of Endothelial Nitric Oxide Synthase N368d
Single Mutant Heme Domain Complexed With
4-(2-(5-(2-(6-Amino-4-Methylpyridin-2-Yl)
Ethyl)pyridin-3-Yl)ethyl)-6-Methylpyridin-2-Amine
pdb|3N6G|B Chain B, Structure Of Endothelial Nitric Oxide Synthase N368d
Single Mutant Heme Domain Complexed With
4-(2-(5-(2-(6-Amino-4-Methylpyridin-2-Yl)
Ethyl)pyridin-3-Yl)ethyl)-6-Methylpyridin-2-Amine
Length = 444
Score = 30.0 bits (66), Expect = 0.88, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 75 KLQCCPTSDGAAAAVLASE--DFVRRY-------GFEANAVEIVGLEMATDTSSTFNSDS 125
KLQ P+ A L S+ DF+ +Y G +A+ + +E ++ T++
Sbjct: 72 KLQTRPSPGPPPAEQLLSQARDFINQYYSSIKRSGSQAHEERLQEVEAEVASTGTYHLRE 131
Query: 126 CIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITY 170
+ G A R + Q + V + DC SA E+ TY
Sbjct: 132 SELVFGAKQAWRNAPRCVGRIQW--GKLQVFDARDCSSAQEMFTY 174
>pdb|3E7S|A Chain A, Structure Of Bovine Enos Oxygenase Domain With Inhibitor
Ar- C95791
Length = 431
Score = 30.0 bits (66), Expect = 0.90, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 75 KLQCCPTSDGAAAAVLASE--DFVRRY-------GFEANAVEIVGLEMATDTSSTFNSDS 125
KLQ P+ A L S+ DF+ +Y G +A+ + +E ++ T++
Sbjct: 54 KLQTRPSPGPPPAEQLLSQARDFINQYYSSIKRSGSQAHEERLQEVEAEVASTGTYHLRE 113
Query: 126 CIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITY 170
+ G A R + Q + V + DC SA E+ TY
Sbjct: 114 SELVFGAKQAWRNAPRCVGRIQW--GKLQVFDARDCSSAQEMFTY 156
>pdb|1ZZT|A Chain A, Bovine Enos N368dV106M DOUBLE MUTANT WITH L-N(Omega)-
Nitroarginine-(4r)-Amino-L-Proline Amide Bound
pdb|1ZZT|B Chain B, Bovine Enos N368dV106M DOUBLE MUTANT WITH L-N(Omega)-
Nitroarginine-(4r)-Amino-L-Proline Amide Bound
Length = 416
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 75 KLQCCPTSDGAAAAVLASE--DFVRRY-------GFEANAVEIVGLEMATDTSSTFNSDS 125
KLQ P+ A L S+ DF+ +Y G +A+ + +E ++ T++
Sbjct: 44 KLQTRPSPGPPPAEQLLSQARDFINQYYSSIKRSGSQAHEERLQEVEAEVASTGTYHLRE 103
Query: 126 CIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITY 170
+ G A R + Q + V + DC SA E+ TY
Sbjct: 104 SELVFGAKQAWRNAPRCVGRIQW--GKLQVFDARDCSSAQEMFTY 146
>pdb|1ZZS|A Chain A, Bovine Enos N368d Single Mutant With
L-N(Omega)-Nitroarginine-(4r)- Amino-L-Proline Amide
Bound
pdb|1ZZS|B Chain B, Bovine Enos N368d Single Mutant With
L-N(Omega)-Nitroarginine-(4r)- Amino-L-Proline Amide
Bound
Length = 416
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 75 KLQCCPTSDGAAAAVLASE--DFVRRY-------GFEANAVEIVGLEMATDTSSTFNSDS 125
KLQ P+ A L S+ DF+ +Y G +A+ + +E ++ T++
Sbjct: 44 KLQTRPSPGPPPAEQLLSQARDFINQYYSSIKRSGSQAHEERLQEVEAEVASTGTYHLRE 103
Query: 126 CIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITY 170
+ G A R + Q + V + DC SA E+ TY
Sbjct: 104 SELVFGAKQAWRNAPRCVGRIQW--GKLQVFDARDCSSAQEMFTY 146
>pdb|1RS8|A Chain A, Bovine Endothelial Nos Heme Domain With
D-Lysine-D-Nitroarginine Amide Bound
pdb|1RS8|B Chain B, Bovine Endothelial Nos Heme Domain With
D-Lysine-D-Nitroarginine Amide Bound
pdb|1RS9|A Chain A, Bovine Endothelial Nos Heme Domain With D-Phenylalanine-D-
Nitroarginine Amide Bound
pdb|1RS9|B Chain B, Bovine Endothelial Nos Heme Domain With D-Phenylalanine-D-
Nitroarginine Amide Bound
pdb|2G6O|A Chain A, Structure Of Bovine Enos Heme Domain (Bh4-Free) Complexed
With Co
pdb|2G6O|B Chain B, Structure Of Bovine Enos Heme Domain (Bh4-Free) Complexed
With Co
pdb|2HX2|A Chain A, Bovine Enos Heme Domain Complexed With
(4s)-N-{4-Amino-5-[(2-
Aminoethyl)-Hydroxyamino]-Pentyl}-N'-Nitroguanidine
pdb|2HX2|B Chain B, Bovine Enos Heme Domain Complexed With
(4s)-N-{4-Amino-5-[(2-
Aminoethyl)-Hydroxyamino]-Pentyl}-N'-Nitroguanidine
pdb|3DQS|A Chain A, Structure Of Endothelial Nos Heme Domain In Complex With A
Inhibitor
(+-)-N1-{cis-4'-[(6"-Amino-4"-Methylpyridin-2"-
Yl)methyl]pyrrolidin-
3'-Yl}-N2-(4'-Chlorobenzyl)ethane-1,2-Diamine
pdb|3DQS|B Chain B, Structure Of Endothelial Nos Heme Domain In Complex With A
Inhibitor
(+-)-N1-{cis-4'-[(6"-Amino-4"-Methylpyridin-2"-
Yl)methyl]pyrrolidin-
3'-Yl}-N2-(4'-Chlorobenzyl)ethane-1,2-Diamine
pdb|3DQT|A Chain A, Structure Of Endothelial Nos Heme Domain In Complex With A
Inhibitor
(+-)-N1-{trans-4'-[(6"-Amino-4"-Methylpyridin-2"-Yl)
Methyl]pyrrolidin-3'-Yl}-N2-(3'-Chlorobenzyl)ethane-1,
2-Diamine
pdb|3DQT|B Chain B, Structure Of Endothelial Nos Heme Domain In Complex With A
Inhibitor
(+-)-N1-{trans-4'-[(6"-Amino-4"-Methylpyridin-2"-Yl)
Methyl]pyrrolidin-3'-Yl}-N2-(3'-Chlorobenzyl)ethane-1,
2-Diamine
pdb|3PNH|A Chain A, Structure Of Bovine Endothelial Nitric Oxide Synthase Heme
Domain In Complex With
6-(((3r,4r)-4-(2-((2-Fluoro-2-(3-Fluorophenyl) Ethyl)
Amino)ethoxy)pyrrolidin-3-Yl)methyl)-4-Methylpyridin-2-
Amine
pdb|3PNH|B Chain B, Structure Of Bovine Endothelial Nitric Oxide Synthase Heme
Domain In Complex With
6-(((3r,4r)-4-(2-((2-Fluoro-2-(3-Fluorophenyl) Ethyl)
Amino)ethoxy)pyrrolidin-3-Yl)methyl)-4-Methylpyridin-2-
Amine
Length = 416
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 75 KLQCCPTSDGAAAAVLASE--DFVRRY-------GFEANAVEIVGLEMATDTSSTFNSDS 125
KLQ P+ A L S+ DF+ +Y G +A+ + +E ++ T++
Sbjct: 44 KLQTRPSPGPPPAEQLLSQARDFINQYYSSIKRSGSQAHEERLQEVEAEVASTGTYHLRE 103
Query: 126 CIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITY 170
+ G A R + Q + V + DC SA E+ TY
Sbjct: 104 SELVFGAKQAWRNAPRCVGRIQW--GKLQVFDARDCSSAQEMFTY 146
>pdb|1P6L|A Chain A, Bovine Endothelial Nos Heme Domain With
L-N(Omega)-Nitroarginine-2,4- L-Diaminobutyric Amide
Bound
pdb|1P6L|B Chain B, Bovine Endothelial Nos Heme Domain With
L-N(Omega)-Nitroarginine-2,4- L-Diaminobutyric Amide
Bound
pdb|1P6M|A Chain A, Bovine Endothelial Nos Heme Domain With (4s)-N-(4-Amino-5-
[aminoethyl]aminopentyl)-N'-Nitroguanidine Bound
pdb|1P6M|B Chain B, Bovine Endothelial Nos Heme Domain With (4s)-N-(4-Amino-5-
[aminoethyl]aminopentyl)-N'-Nitroguanidine Bound
pdb|1P6N|A Chain A, Bovine Endothelial Nos Heme Domain With
L-N(Omega)-Nitroarginine-(4r)- Amino-L-Proline Amide
Bound
pdb|1P6N|B Chain B, Bovine Endothelial Nos Heme Domain With
L-N(Omega)-Nitroarginine-(4r)- Amino-L-Proline Amide
Bound
Length = 417
Score = 30.0 bits (66), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 75 KLQCCPTSDGAAAAVLASE--DFVRRY-------GFEANAVEIVGLEMATDTSSTFNSDS 125
KLQ P+ A L S+ DF+ +Y G +A+ + +E ++ T++
Sbjct: 44 KLQTRPSPGPPPAEQLLSQARDFINQYYSSIKRSGSQAHEERLQEVEAEVASTGTYHLRE 103
Query: 126 CIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITY 170
+ G A R + Q + V + DC SA E+ TY
Sbjct: 104 SELVFGAKQAWRNAPRCVGRIQW--GKLQVFDARDCSSAQEMFTY 146
>pdb|1Q2O|A Chain A, Bovine Endothelial Nitric Oxide Synthase N368d Mutant Heme
Domain Dimer With
L-N(Omega)-Nitroarginine-2,4-L-Diaminobutyramide Bound
pdb|1Q2O|B Chain B, Bovine Endothelial Nitric Oxide Synthase N368d Mutant Heme
Domain Dimer With
L-N(Omega)-Nitroarginine-2,4-L-Diaminobutyramide Bound
Length = 416
Score = 30.0 bits (66), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/105 (24%), Positives = 43/105 (40%), Gaps = 11/105 (10%)
Query: 75 KLQCCPTSDGAAAAVLASE--DFVRRY-------GFEANAVEIVGLEMATDTSSTFNSDS 125
KLQ P+ A L S+ DF+ +Y G +A+ + +E ++ T++
Sbjct: 44 KLQTRPSPGPPPAEQLLSQARDFINQYYSSIKRSGSQAHEERLQEVEAEVASTGTYHLRE 103
Query: 126 CIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITY 170
+ G A R + Q + V + DC SA E+ TY
Sbjct: 104 SELVFGAKQAWRNAPRCVGRIQW--GKLQVFDARDCSSAQEMFTY 146
>pdb|2BM8|A Chain A, Cmci-N160 Apo-Structure
pdb|2BM8|B Chain B, Cmci-N160 Apo-Structure
pdb|2BM8|C Chain C, Cmci-N160 Apo-Structure
pdb|2BM8|D Chain D, Cmci-N160 Apo-Structure
pdb|2BM8|E Chain E, Cmci-N160 Apo-Structure
pdb|2BM8|F Chain F, Cmci-N160 Apo-Structure
pdb|2BM8|G Chain G, Cmci-N160 Apo-Structure
pdb|2BM8|H Chain H, Cmci-N160 Apo-Structure
pdb|2BM8|I Chain I, Cmci-N160 Apo-Structure
pdb|2BM8|J Chain J, Cmci-N160 Apo-Structure
pdb|2BM8|K Chain K, Cmci-N160 Apo-Structure
pdb|2BM8|L Chain L, Cmci-N160 Apo-Structure
pdb|2BM9|A Chain A, Cmci-N160 In Complex With Sam
pdb|2BM9|B Chain B, Cmci-N160 In Complex With Sam
pdb|2BM9|C Chain C, Cmci-N160 In Complex With Sam
pdb|2BM9|D Chain D, Cmci-N160 In Complex With Sam
pdb|2BM9|E Chain E, Cmci-N160 In Complex With Sam
pdb|2BM9|F Chain F, Cmci-N160 In Complex With Sam
pdb|2BR5|A Chain A, Cmci-N160 Sah
pdb|2BR5|B Chain B, Cmci-N160 Sah
pdb|2BR5|C Chain C, Cmci-N160 Sah
pdb|2BR5|D Chain D, Cmci-N160 Sah
pdb|2BR5|E Chain E, Cmci-N160 Sah
pdb|2BR5|F Chain F, Cmci-N160 Sah
Length = 236
Score = 28.5 bits (62), Expect = 3.0, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 44/95 (46%), Gaps = 9/95 (9%)
Query: 101 FEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELH- 159
+E IV L + S + D K++G D DR + QI SD++ I LH
Sbjct: 78 WELRPRTIVELGVYNGGSLAWFRD-LTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQ 136
Query: 160 -DCFSANELITYEALGLCPVGKAKDFIDSG-ANTY 192
DC ++L T+E L + FID+ ANT+
Sbjct: 137 GDC---SDLTTFEHLR--EMAHPLIFIDNAHANTF 166
>pdb|2BR3|A Chain A, Cmci-D160 Mg
pdb|2BR3|B Chain B, Cmci-D160 Mg
pdb|2BR3|C Chain C, Cmci-D160 Mg
pdb|2BR3|D Chain D, Cmci-D160 Mg
pdb|2BR3|E Chain E, Cmci-D160 Mg
pdb|2BR3|F Chain F, Cmci-D160 Mg
pdb|2BR4|A Chain A, Cmci-D160 Mg-Sam
pdb|2BR4|B Chain B, Cmci-D160 Mg-Sam
pdb|2BR4|C Chain C, Cmci-D160 Mg-Sam
pdb|2BR4|D Chain D, Cmci-D160 Mg-Sam
pdb|2BR4|E Chain E, Cmci-D160 Mg-Sam
pdb|2BR4|F Chain F, Cmci-D160 Mg-Sam
Length = 236
Score = 28.1 bits (61), Expect = 3.6, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 43/95 (45%), Gaps = 9/95 (9%)
Query: 101 FEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELH- 159
+E IV L + S + D K++G D DR + QI SD++ I LH
Sbjct: 78 WELRPRTIVELGVYNGGSLAWFRD-LTKIMGIDCQVIGIDRDLSRCQIPASDMENITLHQ 136
Query: 160 -DCFSANELITYEALGLCPVGKAKDFIDSG-ANTY 192
DC ++L T+E L + FID ANT+
Sbjct: 137 GDC---SDLTTFEHLR--EMAHPLIFIDDAHANTF 166
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.317 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 6,695,290
Number of Sequences: 62578
Number of extensions: 267648
Number of successful extensions: 782
Number of sequences better than 100.0: 58
Number of HSP's better than 100.0 without gapping: 28
Number of HSP's successfully gapped in prelim test: 30
Number of HSP's that attempted gapping in prelim test: 703
Number of HSP's gapped (non-prelim): 58
length of query: 216
length of database: 14,973,337
effective HSP length: 95
effective length of query: 121
effective length of database: 9,028,427
effective search space: 1092439667
effective search space used: 1092439667
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 49 (23.5 bits)