BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13256
(216 letters)
Database: swissprot
539,616 sequences; 191,569,459 total letters
Searching..................................................done
>sp|Q07598|NLTP_CHICK Non-specific lipid-transfer protein (Fragment) OS=Gallus gallus
GN=SCP2 PE=2 SV=1
Length = 547
Score = 317 bits (813), Expect = 3e-86, Method: Compositional matrix adjust.
Identities = 147/216 (68%), Positives = 177/216 (81%)
Query: 1 MINIAGLDSSPITAQMFGNAGLEHMKLYGTKPEHFAKIAYKNHLHSTNNPNSQFQVEYTL 60
MIN GL S+PIT QMF NAG EHM+ YGT PE+FAKIA+KNH HSTNNP SQFQ +YTL
Sbjct: 150 MINKYGLASAPITPQMFANAGKEHMEKYGTNPEYFAKIAWKNHSHSTNNPYSQFQKKYTL 209
Query: 61 EQIMNSPKIFGPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSST 120
++++ S K+F LT LQCCPTS+GAAAA+LASEDFV+R+ + AVEI+ MATD ST
Sbjct: 210 DEVLQSRKVFDFLTVLQCCPTSNGAAAAILASEDFVKRHKLQPQAVEILAQVMATDYPST 269
Query: 121 FNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGK 180
F +SC+K++G+DMTK AA++ ++K +KP+D+DVIELHDCFS NE ITYEALGLCP GK
Sbjct: 270 FEENSCMKMVGYDMTKKAAEKCFKKAGLKPTDVDVIELHDCFSVNEFITYEALGLCPEGK 329
Query: 181 AKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATGM 216
A D ID G NTYGGK V+NPSGGLISKGHPLGATG+
Sbjct: 330 ACDLIDRGDNTYGGKWVINPSGGLISKGHPLGATGL 365
>sp|O62742|NLTP_RABIT Non-specific lipid-transfer protein OS=Oryctolagus cuniculus
GN=SCP2 PE=1 SV=1
Length = 547
Score = 312 bits (800), Expect = 1e-84, Method: Compositional matrix adjust.
Identities = 145/216 (67%), Positives = 174/216 (80%)
Query: 1 MINIAGLDSSPITAQMFGNAGLEHMKLYGTKPEHFAKIAYKNHLHSTNNPNSQFQVEYTL 60
+IN GL + P+ QMFG+AG EHM+ YGTK EHFAKI +KNH HS NNP SQFQ EY+L
Sbjct: 147 LINKYGLSAHPVAPQMFGSAGKEHMEKYGTKIEHFAKIGWKNHKHSVNNPYSQFQKEYSL 206
Query: 61 EQIMNSPKIFGPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSST 120
+++M+S IF LT LQCCPTSDGAAAA+LASE+FV++YG ++ AVEI+ EM TD S+
Sbjct: 207 DEVMSSRPIFDFLTVLQCCPTSDGAAAAILASEEFVKKYGLQSKAVEILAQEMVTDFPSS 266
Query: 121 FNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGK 180
F S IK++GFDM+K AA R YEK+ ++PSDIDVIELHDCFSANEL+TYEALGLCP GK
Sbjct: 267 FEEKSIIKMVGFDMSKEAARRCYEKSGLRPSDIDVIELHDCFSANELLTYEALGLCPEGK 326
Query: 181 AKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATGM 216
+D G NTYGGK V+NPSGGLISKGHPLGATG+
Sbjct: 327 GGALVDRGDNTYGGKWVINPSGGLISKGHPLGATGL 362
>sp|P32020|NLTP_MOUSE Non-specific lipid-transfer protein OS=Mus musculus GN=Scp2 PE=1
SV=3
Length = 547
Score = 303 bits (776), Expect = 5e-82, Method: Compositional matrix adjust.
Identities = 142/216 (65%), Positives = 170/216 (78%)
Query: 1 MINIAGLDSSPITAQMFGNAGLEHMKLYGTKPEHFAKIAYKNHLHSTNNPNSQFQVEYTL 60
+I+ GL + PIT QMFG AG EHM+ YGTK EHFAKI +KNH HS NN SQFQ EY+L
Sbjct: 147 LIDKYGLSAHPITPQMFGYAGKEHMEKYGTKVEHFAKIGWKNHKHSVNNTYSQFQDEYSL 206
Query: 61 EQIMNSPKIFGPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSST 120
E++M S +F LT LQCCPTSDGAAAA+L+SE+FV++YG ++ AVEIV EM TD ST
Sbjct: 207 EEVMKSKPVFDFLTILQCCPTSDGAAAAILSSEEFVQQYGLQSKAVEIVAQEMMTDLPST 266
Query: 121 FNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGK 180
F S IK++G+DM+K AA R YEK+ + P+D+DVIELHDCFS NELITYEALGLCP G+
Sbjct: 267 FEEKSIIKVVGYDMSKEAARRCYEKSGLTPNDVDVIELHDCFSVNELITYEALGLCPEGQ 326
Query: 181 AKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATGM 216
+D G NTYGGK V+NPSGGLISKGHPLGATG+
Sbjct: 327 GGTLVDRGDNTYGGKWVINPSGGLISKGHPLGATGL 362
>sp|P11915|NLTP_RAT Non-specific lipid-transfer protein OS=Rattus norvegicus GN=Scp2
PE=1 SV=3
Length = 547
Score = 299 bits (766), Expect = 9e-81, Method: Compositional matrix adjust.
Identities = 137/216 (63%), Positives = 170/216 (78%)
Query: 1 MINIAGLDSSPITAQMFGNAGLEHMKLYGTKPEHFAKIAYKNHLHSTNNPNSQFQVEYTL 60
+IN G+ + P Q+FG+AG EHM+ YGTK EHFAKI +KNH HS NNP SQFQ EY+L
Sbjct: 147 LINKYGMSACPFAPQLFGSAGKEHMETYGTKVEHFAKIGWKNHKHSVNNPYSQFQDEYSL 206
Query: 61 EQIMNSPKIFGPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSST 120
++IM S +F LT LQCCPTSDGAAAA+++SE+FV+++G ++ AVEIV EM TD ST
Sbjct: 207 DEIMKSRPVFDFLTVLQCCPTSDGAAAAIVSSEEFVQKHGLQSKAVEIVAQEMVTDMPST 266
Query: 121 FNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGK 180
F S IK++G+DM+K AA + YEK+ + PSD+DVIELHDCFS NEL+TYEALGLCP G+
Sbjct: 267 FEEKSVIKMVGYDMSKEAARKCYEKSGLGPSDVDVIELHDCFSTNELLTYEALGLCPEGQ 326
Query: 181 AKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATGM 216
+D G NTYGGK V+NPSGGLISKGHPLGATG+
Sbjct: 327 GGALVDRGDNTYGGKWVINPSGGLISKGHPLGATGL 362
>sp|P07857|NLTP_BOVIN Non-specific lipid-transfer protein OS=Bos taurus GN=SCP2 PE=1 SV=2
Length = 543
Score = 291 bits (746), Expect = 2e-78, Method: Compositional matrix adjust.
Identities = 144/216 (66%), Positives = 170/216 (78%)
Query: 1 MINIAGLDSSPITAQMFGNAGLEHMKLYGTKPEHFAKIAYKNHLHSTNNPNSQFQVEYTL 60
M+N GL SP+ QMFGNAG EHM+ YGT EHFAKI +KNH HS NNP SQFQ EY+L
Sbjct: 146 MVNKYGLSPSPVAPQMFGNAGKEHMEKYGTTLEHFAKIGWKNHKHSVNNPYSQFQKEYSL 205
Query: 61 EQIMNSPKIFGPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSST 120
+++M S KIF LT LQCCPTSDGAAAA+LASE FV+++ + AVEI+ EM TD S+
Sbjct: 206 DEVMTSRKIFDFLTVLQCCPTSDGAAAAILASEAFVQKHNLKPKAVEILAQEMVTDMPSS 265
Query: 121 FNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGK 180
F S IK++GFDM+K AA R YEK+ ++PSDIDVIELHDCFSANELITYEALGLCP G+
Sbjct: 266 FEGKSIIKMVGFDMSKEAARRCYEKSGLRPSDIDVIELHDCFSANELITYEALGLCPEGQ 325
Query: 181 AKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATGM 216
++ G NTYGGK V+NPSGGLISKGHPLGATG+
Sbjct: 326 GGKLVERGDNTYGGKWVINPSGGLISKGHPLGATGL 361
>sp|P22307|NLTP_HUMAN Non-specific lipid-transfer protein OS=Homo sapiens GN=SCP2 PE=1
SV=2
Length = 547
Score = 285 bits (730), Expect = 1e-76, Method: Compositional matrix adjust.
Identities = 140/216 (64%), Positives = 170/216 (78%)
Query: 1 MINIAGLDSSPITAQMFGNAGLEHMKLYGTKPEHFAKIAYKNHLHSTNNPNSQFQVEYTL 60
+IN GL + P+ QMFG AG EHM+ YGTK EHFAKI +KNH HS NNP SQFQ EY+L
Sbjct: 147 LINKYGLSAHPVAPQMFGYAGKEHMEKYGTKIEHFAKIGWKNHKHSVNNPYSQFQDEYSL 206
Query: 61 EQIMNSPKIFGPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSST 120
+++M S ++F LT LQCCPTSDGAAAA+LASE FV++YG ++ AVEI+ EM TD S+
Sbjct: 207 DEVMASKEVFDFLTILQCCPTSDGAAAAILASEAFVQKYGLQSKAVEILAQEMMTDLPSS 266
Query: 121 FNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGK 180
F S IK++GFDM+K AA + YEK+ + P+DIDVIELHDCFS NEL+TYEALGLCP G+
Sbjct: 267 FEEKSIIKMVGFDMSKEAARKCYEKSGLTPNDIDVIELHDCFSTNELLTYEALGLCPEGQ 326
Query: 181 AKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATGM 216
+D G NTYGGK V+NPSGGLISKGHPLGATG+
Sbjct: 327 GATLVDRGDNTYGGKWVINPSGGLISKGHPLGATGL 362
>sp|O26884|Y793_METTH Uncharacterized protein MTH_793 OS=Methanothermobacter
thermautotrophicus (strain ATCC 29096 / DSM 1053 / JCM
10044 / NBRC 100330 / Delta H) GN=MTH_793 PE=4 SV=1
Length = 383
Score = 140 bits (353), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 74/194 (38%), Positives = 106/194 (54%), Gaps = 5/194 (2%)
Query: 23 EHMKLYGTKPEHFAKIAYKNHLHSTNNPNSQFQVEYTLEQIMNSPKIFGPLTKLQCCPTS 82
HM YGT E A ++ NH +++NNP +QF ++ T+EQ+MNS + PL L C P S
Sbjct: 151 RHMYEYGTTREQLAMVSVINHENASNNPRAQFPMKVTVEQVMNSTMVADPLRLLDCSPIS 210
Query: 83 DGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRL 142
DGAAA +L D R Y V + A+ T + + ++ D T AA
Sbjct: 211 DGAAAVILCPADMAREY--TDTPVYVKASAQASGTIALHDRRDITRI---DATVNAARNA 265
Query: 143 YEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSG 202
++ ++ P DID++E+HDCFS N ++ E LG G+ + G G VNPSG
Sbjct: 266 FKMAKLTPGDIDLVEVHDCFSINGILAVEDLGFVEKGEGGRAFEDGMTRIDGDIPVNPSG 325
Query: 203 GLISKGHPLGATGM 216
GL ++GHPLGATG+
Sbjct: 326 GLKARGHPLGATGI 339
>sp|Q58944|Y1549_METJA Uncharacterized protein MJ1549 OS=Methanocaldococcus jannaschii
(strain ATCC 43067 / DSM 2661 / JAL-1 / JCM 10045 / NBRC
100440) GN=MJ1549 PE=4 SV=1
Length = 392
Score = 122 bits (307), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 69/203 (33%), Positives = 105/203 (51%), Gaps = 5/203 (2%)
Query: 16 MFGNAGLEHMKLYGTKPEHFAKIAYKNHLHSTNNPNSQFQVEYTLEQIMNSPKIFGPLTK 75
++ +M YG E + + H +++ N +QF + TLEQ++NS + PL
Sbjct: 144 LYAMMAQRYMYEYGLTLEELSMWSVIMHENASKNRYAQFPFKVTLEQVLNSSPVAEPLRL 203
Query: 76 LQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMT 135
L C P SDGAAA ++ + + + N +I+ ++ + S T S +
Sbjct: 204 LHCSPVSDGAAALIVCEAEKAKEF---VNKDDIIYIKASVQASDTIALHSRESITSLKAA 260
Query: 136 KAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFI--DSGANTYG 193
K A+++ Y+ I+P D+DV E+HDCF+ N LI E LG C G+A + A Y
Sbjct: 261 KVASEKAYKMANIEPKDVDVAEVHDCFAINGLILMEELGFCKKGEAGKIVYDKKIAIDYD 320
Query: 194 GKHVVNPSGGLISKGHPLGATGM 216
G VNPSGGL + GH LGATG+
Sbjct: 321 GFPAVNPSGGLKAAGHALGATGI 343
>sp|Q8VPF1|PCAF_PSESB Beta-ketoadipyl-CoA thiolase OS=Pseudomonas sp. (strain B13)
GN=pcaF PE=1 SV=1
Length = 401
Score = 60.1 bits (144), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/170 (27%), Positives = 82/170 (48%), Gaps = 30/170 (17%)
Query: 49 NPNSQFQVEYTLEQIMNSPKIFGP---LTKLQCCPTSDGAAAAVLASEDFVRRYGFEANA 105
+ + + + TLE + + GP +T +DG+ A +LAS + V+++G +A A
Sbjct: 221 DADEHLRPDTTLEALAKLKPVNGPDKTVTAGNASGVNDGSVALILASAEAVKKHGLKARA 280
Query: 106 VEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSAN 165
+++G+ ++ +++G A +L E+ + +D DVIEL++ F+A
Sbjct: 281 -KVLGMA---------SAGVAPRVMGIGPVPAV-RKLLERLNLSVADFDVIELNEAFAAQ 329
Query: 166 ELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
L LG+ D A VNP+GG I+ GHPLGA+G
Sbjct: 330 GLAVTRELGIA---------DDDAR-------VNPNGGAIALGHPLGASG 363
>sp|Q51956|PCAF_PSEPU Beta-ketoadipyl-CoA thiolase OS=Pseudomonas putida GN=pcaF PE=3
SV=1
Length = 400
Score = 58.2 bits (139), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 50/182 (27%), Positives = 82/182 (45%), Gaps = 31/182 (17%)
Query: 37 KIAYKNHLHSTNNPNSQFQVEYTLEQIMNSPKIFGP---LTKLQCCPTSDGAAAAVLASE 93
+IA+K + + + E TLE + + GP +T +DGAAA +LAS
Sbjct: 209 RIAHKKG-ETIVERDEHLRPETTLEALTKLKPVNGPDKTVTAGNASGVNDGAAALILASA 267
Query: 94 DFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDI 153
+ V+++G A ++G+ + +++G A +L E+ + SD
Sbjct: 268 EAVKKHGLTPRA-RVLGMA---------SGGVAPRVMGIGPVPAV-RKLTERLGVAVSDF 316
Query: 154 DVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGA 213
DVIEL++ F++ L LG+ D VNP+GG I+ GHPLG
Sbjct: 317 DVIELNEAFASQGLAVLRELGVA---------DDAPQ-------VNPNGGAIALGHPLGM 360
Query: 214 TG 215
+G
Sbjct: 361 SG 362
>sp|Q43935|CATF_ACIAD Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1)
GN=catF PE=3 SV=1
Length = 401
Score = 55.5 bits (132), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 27/145 (18%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAA ++AS++ V +Y +A A I S+T + +++
Sbjct: 246 GSVTAGNASGINDGAAAVLIASDEAVAQYQLKARAKII--------ASTTVGIEP--RIM 295
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
GF A +L ++ + +DVIEL++ F+A L LGL D A
Sbjct: 296 GF-APAPAIKKLLKQANLTLDQMDVIELNEAFAAQALACTRDLGLA---------DDDAR 345
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
VNP+GG I+ GHPLGA+G
Sbjct: 346 -------VNPNGGAIALGHPLGASG 363
>sp|Q43974|PCAF_ACIAD Beta-ketoadipyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1)
GN=pcaF PE=1 SV=1
Length = 401
Score = 55.5 bits (132), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 70/145 (48%), Gaps = 27/145 (18%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAAA ++AS++ V +Y +A A I S+T + +++
Sbjct: 246 GSVTAGNASGINDGAAAVLIASDEAVAQYQLKARAKII--------ASTTVGIEP--RIM 295
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
GF A +L ++ + +DVIEL++ F+A L LGL D A
Sbjct: 296 GF-APAPAIKKLLKQANLTLDQMDVIELNEAFAAQALACTRDLGLA---------DDDAR 345
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
VNP+GG I+ GHPLGA+G
Sbjct: 346 -------VNPNGGAIALGHPLGASG 363
>sp|P0C7L3|PAAJ_ECOLX Beta-ketoadipyl-CoA thiolase OS=Escherichia coli GN=paaJ PE=3 SV=1
Length = 401
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 75/168 (44%), Gaps = 30/168 (17%)
Query: 51 NSQFQVEYTLEQI--MNSP-KIFGPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVE 107
+ + E TLEQ+ + +P + G +T +DGAAA ++ASE G A
Sbjct: 223 DEHLRPETTLEQLRGLKAPFRANGVITAGNASGVNDGAAALIIASEQMAAAQGLTPRA-R 281
Query: 108 IVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANEL 167
IV + A +L+G A R+ E+ + D+DVIEL++ F+A L
Sbjct: 282 IVAMATAGVEP---------RLMGLGPVPAT-RRVLERAGLSIHDMDVIELNEAFAAQAL 331
Query: 168 ITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
LGL D + VNP+GG I+ GHPLG +G
Sbjct: 332 GVLRELGLP---------DDAPH-------VNPNGGAIALGHPLGMSG 363
>sp|P0C7L2|PAAJ_ECOLI 3-oxoadipyl-CoA/3-oxo-5,6-dehydrosuberyl-CoA thiolase
OS=Escherichia coli (strain K12) GN=paaJ PE=1 SV=1
Length = 401
Score = 55.1 bits (131), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 51/168 (30%), Positives = 75/168 (44%), Gaps = 30/168 (17%)
Query: 51 NSQFQVEYTLEQI--MNSP-KIFGPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVE 107
+ + E TLEQ+ + +P + G +T +DGAAA ++ASE G A
Sbjct: 223 DEHLRPETTLEQLRGLKAPFRANGVITAGNASGVNDGAAALIIASEQMAAAQGLTPRA-R 281
Query: 108 IVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANEL 167
IV + A +L+G A R+ E+ + D+DVIEL++ F+A L
Sbjct: 282 IVAMATAGVEP---------RLMGLGPVPAT-RRVLERAGLSIHDMDVIELNEAFAAQAL 331
Query: 168 ITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
LGL D + VNP+GG I+ GHPLG +G
Sbjct: 332 GVLRELGLP---------DDAPH-------VNPNGGAIALGHPLGMSG 363
>sp|Q8BWT1|THIM_MOUSE 3-ketoacyl-CoA thiolase, mitochondrial OS=Mus musculus GN=Acaa2
PE=1 SV=3
Length = 397
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 73/162 (45%), Gaps = 32/162 (19%)
Query: 57 EYTLEQIMNSPKIF---GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEM 113
+ TLEQ+ P +F G +T SDGA A ++ASED V+++ F A +VG +
Sbjct: 226 QTTLEQLQKLPSVFKKDGTVTAGNASGVSDGAGAVIIASEDAVKKHNFTPLA-RVVGYFV 284
Query: 114 ATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEAL 173
+ D I IG A + +K + D+D+I++++ F+ L +AL
Sbjct: 285 S-------GCDPTIMGIG---PVPAINGALKKAGLSLKDMDLIDVNEAFAPQFLSVQKAL 334
Query: 174 GLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
L P N SGG I+ GHPLG +G
Sbjct: 335 DLDP------------------SKTNVSGGAIALGHPLGGSG 358
>sp|P13437|THIM_RAT 3-ketoacyl-CoA thiolase, mitochondrial OS=Rattus norvegicus
GN=Acaa2 PE=2 SV=1
Length = 397
Score = 53.1 bits (126), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 47/162 (29%), Positives = 72/162 (44%), Gaps = 32/162 (19%)
Query: 57 EYTLEQIMNSPKIF---GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEM 113
+ TLEQ+ N P +F G +T SDGA ++ASED V+++ F A +VG
Sbjct: 226 QTTLEQLQNLPPVFKKEGTVTAGNASGMSDGAGVVIIASEDAVKKHNFTPLA-RVVGY-- 282
Query: 114 ATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEAL 173
F S ++G A L +K + D+D+I++++ F+ L ++L
Sbjct: 283 -------FVSGCDPAIMGIGPVPAITGAL-KKAGLSLKDMDLIDVNEAFAPQFLAVQKSL 334
Query: 174 GLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
L P N SGG I+ GHPLG +G
Sbjct: 335 DLDP------------------SKTNVSGGAIALGHPLGGSG 358
>sp|Q3T0R7|THIM_BOVIN 3-ketoacyl-CoA thiolase, mitochondrial OS=Bos taurus GN=ACAA2 PE=2
SV=1
Length = 397
Score = 51.2 bits (121), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 73/162 (45%), Gaps = 32/162 (19%)
Query: 57 EYTLEQIMNSPKIF---GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEM 113
+ T+EQ+ P +F G +T SDGA A ++ASED V+++ F A IVG
Sbjct: 226 QTTMEQLNKLPPVFKKEGTVTAGNASGVSDGAGAVIIASEDAVKKHNFTPLA-RIVGY-- 282
Query: 114 ATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEAL 173
F S ++G A + L +KT + D+D++E+++ F+ L ++L
Sbjct: 283 -------FVSGCDPTIMGIGPVPAISGAL-KKTGLSLKDMDLVEVNEAFAPQYLAVEKSL 334
Query: 174 GLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
L P N +GG I+ GHPL +G
Sbjct: 335 NLDP------------------SKTNVNGGAIALGHPLAGSG 358
>sp|A4Y1B5|FADA_SHEPC 3-ketoacyl-CoA thiolase OS=Shewanella putrefaciens (strain CN-32 /
ATCC BAA-453) GN=fadA PE=3 SV=1
Length = 387
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 81/203 (39%), Gaps = 37/203 (18%)
Query: 24 HMKLYGTKPE-HFAKIAYKNHLHSTNNP------NSQFQVEYTLEQIMNSPKIFGPLTKL 76
H + Y E FAK Y H N + + E T+E + +F P+
Sbjct: 173 HQRAYAATVEGRFAKEIYGIEGHDANGALIKVLQDEVIRPETTMESLAALRPVFDPVNGT 232
Query: 77 QCCPTS----DGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGF 132
TS DGA+A ++ E R G A + + D+ I +G+
Sbjct: 233 VTAGTSSALSDGASAMLIMEESKARALGLPIRA--------RIRSMAVAGCDAAI--MGY 282
Query: 133 DMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTY 192
A L + I +D+DVIEL++ F+A L + LGL D +D
Sbjct: 283 GPVPATQKAL-ARAGITVADLDVIELNEAFAAQSLPCVKDLGLA------DVVDDK---- 331
Query: 193 GGKHVVNPSGGLISKGHPLGATG 215
+N +GG I+ GHPLG +G
Sbjct: 332 -----INLNGGAIALGHPLGCSG 349
>sp|A6WH99|FADA_SHEB8 3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS185)
GN=fadA PE=3 SV=1
Length = 387
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 81/203 (39%), Gaps = 37/203 (18%)
Query: 24 HMKLYGTKPE-HFAKIAYKNHLHSTNNP------NSQFQVEYTLEQIMNSPKIFGPLTKL 76
H + Y E FAK Y H N + + E T+E + +F P+
Sbjct: 173 HQRAYAATVEGRFAKEIYGIEGHDANGALIKVLQDEVIRPETTMESLAALRPVFDPVNGT 232
Query: 77 QCCPTS----DGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGF 132
TS DGA+A ++ E R G A + + D+ I +G+
Sbjct: 233 VTAGTSSALSDGASAMLIMEESKARALGLPIRA--------RIRSMAVAGCDAAI--MGY 282
Query: 133 DMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTY 192
A L + I +D+DVIEL++ F+A L + LGL D +D
Sbjct: 283 GPVPATQKAL-ARAGITVADLDVIELNEAFAAQSLPCVKDLGLA------DVVDDK---- 331
Query: 193 GGKHVVNPSGGLISKGHPLGATG 215
+N +GG I+ GHPLG +G
Sbjct: 332 -----INLNGGAIALGHPLGCSG 349
>sp|A3CYJ3|FADA_SHEB5 3-ketoacyl-CoA thiolase OS=Shewanella baltica (strain OS155 / ATCC
BAA-1091) GN=fadA PE=3 SV=1
Length = 387
Score = 50.4 bits (119), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 81/203 (39%), Gaps = 37/203 (18%)
Query: 24 HMKLYGTKPE-HFAKIAYKNHLHSTNNP------NSQFQVEYTLEQIMNSPKIFGPLTKL 76
H + Y E FAK Y H N + + E T+E + +F P+
Sbjct: 173 HQRAYAATVEGRFAKEIYGIEGHDANGALIKVLQDEVIRPETTMESLAALRPVFDPVNGT 232
Query: 77 QCCPTS----DGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGF 132
TS DGA+A ++ E R G A + + D+ I +G+
Sbjct: 233 VTAGTSSALSDGASAMLIMEESKARALGLPIRA--------RIRSMAVAGCDAAI--MGY 282
Query: 133 DMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTY 192
A L + I +D+DVIEL++ F+A L + LGL D +D
Sbjct: 283 GPVPATQKAL-ARAGITVADLDVIELNEAFAAQSLPCVKDLGLA------DVVDDK---- 331
Query: 193 GGKHVVNPSGGLISKGHPLGATG 215
+N +GG I+ GHPLG +G
Sbjct: 332 -----INLNGGAIALGHPLGCSG 349
>sp|P42765|THIM_HUMAN 3-ketoacyl-CoA thiolase, mitochondrial OS=Homo sapiens GN=ACAA2
PE=1 SV=2
Length = 397
Score = 49.7 bits (117), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 32/162 (19%)
Query: 57 EYTLEQIMNSPKIF---GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEM 113
+ TLEQ+ P +F G +T +DGA A ++ASED V+++ F A IVG
Sbjct: 226 QTTLEQLQKLPPVFKKDGTVTAGNASGVADGAGAVIIASEDAVKKHNFTPLA-RIVGY-- 282
Query: 114 ATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEAL 173
F S ++G A + L +K + D+D++E+++ F+ L +L
Sbjct: 283 -------FVSGCDPSIMGIGPVPAISGAL-KKAGLSLKDMDLVEVNEAFAPQYLAVERSL 334
Query: 174 GLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
L D + N GG I+ GHPLG +G
Sbjct: 335 DL-------DISKTNVN-----------GGAIALGHPLGGSG 358
>sp|Q5RES5|THIM_PONAB 3-ketoacyl-CoA thiolase, mitochondrial OS=Pongo abelii GN=ACAA2
PE=2 SV=1
Length = 397
Score = 49.3 bits (116), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 72/162 (44%), Gaps = 32/162 (19%)
Query: 57 EYTLEQIMNSPKIF---GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEM 113
+ TLEQ+ P +F G +T +DGA A ++ASED V+++ F A IVG
Sbjct: 226 QTTLEQLQKLPPVFKKDGTVTAGNASGIADGAGAVIIASEDAVKKHNFTPLA-RIVGY-- 282
Query: 114 ATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEAL 173
F S ++G A + L +K + D+D++E+++ F+ L +L
Sbjct: 283 -------FVSGCDPSIMGIGPVPAISGAL-KKAGLSLKDMDLVEVNEAFAPQYLAVERSL 334
Query: 174 GLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
L D + N GG I+ GHPLG +G
Sbjct: 335 DL-------DISKTNVN-----------GGAIALGHPLGGSG 358
>sp|Q9I6R0|PCAF_PSEAE Beta-ketoadipyl-CoA thiolase OS=Pseudomonas aeruginosa (strain ATCC
15692 / PAO1 / 1C / PRS 101 / LMG 12228) GN=pcaF PE=3
SV=1
Length = 401
Score = 48.9 bits (115), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/162 (28%), Positives = 71/162 (43%), Gaps = 30/162 (18%)
Query: 57 EYTLEQIMNSPKIFGP---LTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEM 113
+ TLE + + GP +T +DGAAA VLAS + V ++G A ++G+
Sbjct: 229 DTTLEALARLKPVNGPEKTVTAGNASGVNDGAAALVLASAEAVEKHGLTPRA-RVLGMAS 287
Query: 114 ATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEAL 173
A +++G A +L + + DVIEL++ F++ L L
Sbjct: 288 AGVAP---------RIMGIGPVPAV-RKLLRRLDLAIDAFDVIELNEAFASQGLACLREL 337
Query: 174 GLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
G+ A D VNP+GG I+ GHPLG +G
Sbjct: 338 GV-----ADD-----------SEKVNPNGGAIALGHPLGMSG 363
>sp|A1S1I7|FADA_SHEAM 3-ketoacyl-CoA thiolase OS=Shewanella amazonensis (strain ATCC
BAA-1098 / SB2B) GN=fadA PE=3 SV=1
Length = 387
Score = 48.5 bits (114), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 54/203 (26%), Positives = 80/203 (39%), Gaps = 37/203 (18%)
Query: 24 HMKLYGTKPE-HFAKIAYKNHLHSTNNP------NSQFQVEYTLEQIMNSPKIFGP---- 72
H + + E FA Y H N + + E TLE + +F P
Sbjct: 173 HQRAHAASIEGRFANEIYAIEGHDANGALIKVDYDEVIRPETTLESLAGLRPVFDPANGT 232
Query: 73 LTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGF 132
+T SDGAAA ++ E+ R G A + + D+ I +G+
Sbjct: 233 VTAGTSSALSDGAAAMLVMEEEKARALGLTIRA--------RVRSMAVAGCDAAI--MGY 282
Query: 133 DMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTY 192
A L + + D+DVIEL++ F+A L + LGL V + K
Sbjct: 283 GPVPATQKALA-RAGLSIQDMDVIELNEAFAAQSLPCVKDLGLMDVVEDK---------- 331
Query: 193 GGKHVVNPSGGLISKGHPLGATG 215
VN +GG I+ GHPLG +G
Sbjct: 332 -----VNLNGGAIALGHPLGCSG 349
>sp|A6TGM3|FADA_KLEP7 3-ketoacyl-CoA thiolase OS=Klebsiella pneumoniae subsp. pneumoniae
(strain ATCC 700721 / MGH 78578) GN=fadA PE=3 SV=1
Length = 387
Score = 48.5 bits (114), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 50/171 (29%), Positives = 74/171 (43%), Gaps = 30/171 (17%)
Query: 49 NPNSQFQVEYTLEQIMNSPKIFGPLTKLQCCPTS----DGAAAAVLASEDFVRRYGFEAN 104
N + + E T+E + F P+T TS DGAAA +L SE R G +
Sbjct: 205 NYDEVIRPETTVETLSTLKPAFDPVTGTVTAGTSSALSDGAAAMLLMSESRARELGLKPR 264
Query: 105 AVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSA 164
A + + D I +G+ A+ L +K + SDIDV E+++ F+A
Sbjct: 265 A--------RVRSMAVVGCDPSI--MGYGPVPASKLAL-KKAGLSTSDIDVFEMNEAFAA 313
Query: 165 NELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
L + LGL + ID +N +GG I+ GHPLG +G
Sbjct: 314 QILPCIKDLGLM------EQIDEK---------INLNGGAIALGHPLGCSG 349
>sp|A1RDW3|FADA_SHESW 3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain W3-18-1) GN=fadA
PE=3 SV=1
Length = 387
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 80/203 (39%), Gaps = 37/203 (18%)
Query: 24 HMKLYGTKPE-HFAKIAYKNHLHSTNNP------NSQFQVEYTLEQIMNSPKIFGPLTKL 76
H + Y E FAK Y H N + + E T+E + +F P+
Sbjct: 173 HQRAYAATIEGRFAKEIYGIEGHDANGALIKVLQDEVIRPETTMESLAALRPVFDPVNGT 232
Query: 77 QCCPTS----DGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGF 132
TS DGA+A ++ E R A + + D+ I +G+
Sbjct: 233 VTAGTSSALSDGASAMLIMEESKARALSLPIRA--------RIRSMAVAGCDAAI--MGY 282
Query: 133 DMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTY 192
A L + I +D+DVIEL++ F+A L + LGL D +D
Sbjct: 283 GPVPATQKAL-ARAGITVADLDVIELNEAFAAQSLPCVKDLGLA------DVVDDK---- 331
Query: 193 GGKHVVNPSGGLISKGHPLGATG 215
+N +GG I+ GHPLG +G
Sbjct: 332 -----INLNGGAIALGHPLGCSG 349
>sp|Q6FF69|FADA_ACIAD 3-ketoacyl-CoA thiolase OS=Acinetobacter sp. (strain ADP1) GN=fadA
PE=3 SV=1
Length = 390
Score = 47.8 bits (112), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 56/229 (24%), Positives = 92/229 (40%), Gaps = 54/229 (23%)
Query: 12 ITAQMFGNA---GLEHMKLYGTKPEHFAKIA-----YKNHL-----HSTN---------- 48
+TA+M G G E +G + A A +KN + H N
Sbjct: 153 LTAEMLGRMNGIGREEQDAFGVESHRRAWAATQEGRFKNEIVGVEGHDANGFKILCDIDE 212
Query: 49 --NPNSQFQVEYTLEQIMNSPKIFGPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAV 106
P++ + L + + PK G +T SDGA+A +L S + + G + AV
Sbjct: 213 VIRPDANLEAFKALRPVFD-PK-GGTVTAATSSALSDGASAMLLMSAERAQALGLKPRAV 270
Query: 107 EIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANE 166
+ + D+ I +G+ A L ++ + +DI +EL++ F+A
Sbjct: 271 --------IRSMAVAGCDAAI--MGYGPVPATQKAL-KRAGLSVADIQTVELNEAFAAQG 319
Query: 167 LITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
L + LGL Y + +VN +GG I+ GHPLG +G
Sbjct: 320 LSVLKGLGL----------------YEKQDIVNLNGGAIALGHPLGCSG 352
>sp|Q8EKS0|FADA_SHEON 3-ketoacyl-CoA thiolase OS=Shewanella oneidensis (strain MR-1)
GN=fadA PE=3 SV=1
Length = 387
Score = 47.4 bits (111), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 53/203 (26%), Positives = 80/203 (39%), Gaps = 37/203 (18%)
Query: 24 HMKLYGTKPE-HFAKIAYKNHLHSTNNP------NSQFQVEYTLEQIMNSPKIFGPLTKL 76
H + Y E FAK Y H + + E T+E + +F P+
Sbjct: 173 HQRAYAATIEGRFAKEIYGIEGHDATGALIKVLQDEVIRPETTMESLAVLRPVFDPVNGT 232
Query: 77 QCCPTS----DGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGF 132
TS DGA+A ++ E R G A + + D+ I +G+
Sbjct: 233 VTAGTSSALSDGASAMLIMEESKARALGLPIRA--------RIRSMAVAGCDAAI--MGY 282
Query: 133 DMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTY 192
A L + I +D+DVIEL++ F+A L + LGL D +D
Sbjct: 283 GPVPATQKAL-ARAGITVNDLDVIELNEAFAAQSLPCVKDLGLL------DVVDEK---- 331
Query: 193 GGKHVVNPSGGLISKGHPLGATG 215
+N +GG I+ GHPLG +G
Sbjct: 332 -----INLNGGAIALGHPLGCSG 349
>sp|Q12TB5|FADA_SHEDO 3-ketoacyl-CoA thiolase OS=Shewanella denitrificans (strain OS217 /
ATCC BAA-1090 / DSM 15013) GN=fadA PE=3 SV=1
Length = 387
Score = 47.0 bits (110), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/203 (25%), Positives = 81/203 (39%), Gaps = 37/203 (18%)
Query: 24 HMKLYGTKPE-HFAKIAYKNHLHSTNNP------NSQFQVEYTLEQIMNSPKIFGP---- 72
H + + E FAK + H N + + E T+E + +F P
Sbjct: 173 HQRAHAATVEGRFAKEIWAMEGHDANGALIKVMHDEVIRPETTMESLAGLRPVFDPANGT 232
Query: 73 LTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGF 132
+T SDGA+A ++ E R G A + + D+ I +G+
Sbjct: 233 VTAGTSSALSDGASAMLVMEESKARALGLPIRA--------RIRSMAVAGCDAAI--MGY 282
Query: 133 DMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTY 192
A L + + +D+DVIEL++ F+A L + LGL V + K
Sbjct: 283 GPVPATQKALA-RAGLTVADLDVIELNEAFAAQSLPCVKDLGLQDVVEEK---------- 331
Query: 193 GGKHVVNPSGGLISKGHPLGATG 215
+N +GG I+ GHPLG +G
Sbjct: 332 -----INLNGGAIALGHPLGCSG 349
>sp|Q87TP0|FADA_VIBPA 3-ketoacyl-CoA thiolase OS=Vibrio parahaemolyticus serotype O3:K6
(strain RIMD 2210633) GN=fadA PE=3 SV=1
Length = 391
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 51/191 (26%), Positives = 82/191 (42%), Gaps = 41/191 (21%)
Query: 40 YKNHLHSTNN---PNSQFQVEY--------TLEQIMNSPKIFGP----LTKLQCCPTSDG 84
+KN + T + FQ++Y T+E + +F P +T SDG
Sbjct: 189 FKNEILPTEGHAADGTLFQLDYDEVIRPETTVEGLSQLRPVFDPANGTVTAGTSSALSDG 248
Query: 85 AAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRLYE 144
A+A ++ SE+ G + A I G+ +A S ++G+ A L +
Sbjct: 249 ASAMLIMSEEKANELGLKIRA-RIKGMAIAGCDPS---------IMGYGPVPATQKAL-K 297
Query: 145 KTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGGL 204
+ + D+DV+EL++ F+A L + LGL V K VN +GG
Sbjct: 298 RAGLAIEDMDVVELNEAFAAQSLPCAKDLGLLEVMDEK---------------VNLNGGA 342
Query: 205 ISKGHPLGATG 215
I+ GHPLG +G
Sbjct: 343 IALGHPLGCSG 353
>sp|A3M1H9|FADA_ACIBT 3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain ATCC
17978 / NCDC KC 755) GN=fadA PE=3 SV=2
Length = 390
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 49 NPNSQFQVEYTLEQIMNSPKIFGPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEI 108
P++ + L+ + + PK G +T SDGA+A +L S + + G + AV
Sbjct: 215 RPDANLEAFKALKPVFD-PK-GGSVTAATSSALSDGASAMLLMSAERAQALGLKPRAV-- 270
Query: 109 VGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELI 168
+ + D+ I +G+ A L ++ + +DI +EL++ F+A L
Sbjct: 271 ------IRSMAVAGCDAAI--MGYGPVPATQKAL-KRAGLSIADIQTVELNEAFAAQGLS 321
Query: 169 TYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
+ LGL Y + +VN +GG I+ GHPLG +G
Sbjct: 322 VLKGLGL----------------YDKQDIVNLNGGAIALGHPLGCSG 352
>sp|B0VE46|FADA_ACIBY 3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AYE)
GN=fadA PE=3 SV=1
Length = 390
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 49 NPNSQFQVEYTLEQIMNSPKIFGPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEI 108
P++ + L+ + + PK G +T SDGA+A +L S + + G + AV
Sbjct: 215 RPDANLEAFKALKPVFD-PK-GGSVTAATSSALSDGASAMLLMSAERAQALGLKPRAV-- 270
Query: 109 VGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELI 168
+ + D+ I +G+ A L ++ + +DI +EL++ F+A L
Sbjct: 271 ------IRSMAVAGCDAAI--MGYGPVPATQKAL-KRAGLSIADIQTVELNEAFAAQGLS 321
Query: 169 TYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
+ LGL Y + +VN +GG I+ GHPLG +G
Sbjct: 322 VLKGLGL----------------YDKQDIVNLNGGAIALGHPLGCSG 352
>sp|B0VLX5|FADA_ACIBS 3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain SDF)
GN=fadA PE=3 SV=1
Length = 390
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 49 NPNSQFQVEYTLEQIMNSPKIFGPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEI 108
P++ + L+ + + PK G +T SDGA+A +L S + + G + AV
Sbjct: 215 RPDANLEAFKALKPVFD-PK-GGSVTAATSSALSDGASAMLLMSAERAQALGLKPRAV-- 270
Query: 109 VGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELI 168
+ + D+ I +G+ A L ++ + +DI +EL++ F+A L
Sbjct: 271 ------IRSMAVAGCDAAI--MGYGPVPATQKAL-KRAGLSIADIQTVELNEAFAAQGLS 321
Query: 169 TYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
+ LGL Y + +VN +GG I+ GHPLG +G
Sbjct: 322 VLKGLGL----------------YDKQDIVNLNGGAIALGHPLGCSG 352
>sp|B2I2J8|FADA_ACIBC 3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain ACICU)
GN=fadA PE=3 SV=1
Length = 390
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 49 NPNSQFQVEYTLEQIMNSPKIFGPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEI 108
P++ + L+ + + PK G +T SDGA+A +L S + + G + AV
Sbjct: 215 RPDANLEAFKALKPVFD-PK-GGSVTAATSSALSDGASAMLLMSAERAQALGLKPRAV-- 270
Query: 109 VGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELI 168
+ + D+ I +G+ A L ++ + +DI +EL++ F+A L
Sbjct: 271 ------IRSMAVAGCDAAI--MGYGPVPATQKAL-KRAGLSIADIQTVELNEAFAAQGLS 321
Query: 169 TYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
+ LGL Y + +VN +GG I+ GHPLG +G
Sbjct: 322 VLKGLGL----------------YDKQDIVNLNGGAIALGHPLGCSG 352
>sp|B7I3P0|FADA_ACIB5 3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain AB0057)
GN=fadA PE=3 SV=1
Length = 390
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 49 NPNSQFQVEYTLEQIMNSPKIFGPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEI 108
P++ + L+ + + PK G +T SDGA+A +L S + + G + AV
Sbjct: 215 RPDANLEAFKALKPVFD-PK-GGSVTAATSSALSDGASAMLLMSAERAQALGLKPRAV-- 270
Query: 109 VGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELI 168
+ + D+ I +G+ A L ++ + +DI +EL++ F+A L
Sbjct: 271 ------IRSMAVAGCDAAI--MGYGPVPATQKAL-KRAGLSIADIQTVELNEAFAAQGLS 321
Query: 169 TYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
+ LGL Y + +VN +GG I+ GHPLG +G
Sbjct: 322 VLKGLGL----------------YDKQDIVNLNGGAIALGHPLGCSG 352
>sp|B7H1I1|FADA_ACIB3 3-ketoacyl-CoA thiolase OS=Acinetobacter baumannii (strain
AB307-0294) GN=fadA PE=3 SV=1
Length = 390
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 43/167 (25%), Positives = 74/167 (44%), Gaps = 29/167 (17%)
Query: 49 NPNSQFQVEYTLEQIMNSPKIFGPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEI 108
P++ + L+ + + PK G +T SDGA+A +L S + + G + AV
Sbjct: 215 RPDANLEAFKALKPVFD-PK-GGSVTAATSSALSDGASAMLLMSAERAQALGLKPRAV-- 270
Query: 109 VGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELI 168
+ + D+ I +G+ A L ++ + +DI +EL++ F+A L
Sbjct: 271 ------IRSMAVAGCDAAI--MGYGPVPATQKAL-KRAGLSIADIQTVELNEAFAAQGLS 321
Query: 169 TYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
+ LGL Y + +VN +GG I+ GHPLG +G
Sbjct: 322 VLKGLGL----------------YDKQDIVNLNGGAIALGHPLGCSG 352
>sp|P66926|FADA4_MYCTU Probable acetyl-CoA acetyltransferase OS=Mycobacterium tuberculosis
GN=fadA4 PE=3 SV=1
Length = 389
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T SDGAAA V+ +++ + G A EI + ST S
Sbjct: 236 GTITAGSASQISDGAAAVVVMNQEKAQELGLTWLA-EIGAHGVVAGPDSTLQSQPA---- 290
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
A ++ ++ I +DV+E+++ F+A L + LGL P
Sbjct: 291 ------NAINKALDREGISVDQLDVVEINEAFAAVALASIRELGLNP------------- 331
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
+VN +GG I+ GHPLG +G
Sbjct: 332 -----QIVNVNGGAIAVGHPLGMSG 351
>sp|P66927|FADA4_MYCBO Probable acetyl-CoA acetyltransferase OS=Mycobacterium bovis
(strain ATCC BAA-935 / AF2122/97) GN=fadA4 PE=3 SV=1
Length = 389
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 39/145 (26%), Positives = 61/145 (42%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T SDGAAA V+ +++ + G A EI + ST S
Sbjct: 236 GTITAGSASQISDGAAAVVVMNQEKAQELGLTWLA-EIGAHGVVAGPDSTLQSQPA---- 290
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
A ++ ++ I +DV+E+++ F+A L + LGL P
Sbjct: 291 ------NAINKALDREGISVDQLDVVEINEAFAAVALASIRELGLNP------------- 331
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
+VN +GG I+ GHPLG +G
Sbjct: 332 -----QIVNVNGGAIAVGHPLGMSG 351
>sp|Q0I0T4|FADA_SHESR 3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-7) GN=fadA
PE=3 SV=1
Length = 387
Score = 46.6 bits (109), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 81/203 (39%), Gaps = 37/203 (18%)
Query: 24 HMKLYGTKPE-HFAKIAYKNHLHSTNNP------NSQFQVEYTLEQIMNSPKIFGP---- 72
H + + E FAK Y H N + + E ++E + +F P
Sbjct: 173 HQRAHAATVEGRFAKEIYAIEGHDANGALIKVLHDEVIRPETSMESLAALRPVFDPANGT 232
Query: 73 LTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGF 132
+T SDGA+A ++ E R G A + + D+ I +G+
Sbjct: 233 VTAGTSSALSDGASAMLVMEESKARALGLPIRA--------RIRSMAVAGCDAAI--MGY 282
Query: 133 DMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTY 192
A L + I +D+DVIEL++ F+A L + LGL D +D
Sbjct: 283 GPVPATQKALA-RAGITVNDLDVIELNEAFAAQSLPCVKDLGLL------DVVDEK---- 331
Query: 193 GGKHVVNPSGGLISKGHPLGATG 215
+N +GG I+ GHPLG +G
Sbjct: 332 -----INLNGGAIALGHPLGCSG 349
>sp|Q0KBP1|BKTB_CUPNH Beta-ketothiolase BktB OS=Cupriavidus necator (strain ATCC 17699 /
H16 / DSM 428 / Stanier 337) GN=bktB PE=1 SV=1
Length = 394
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 39/72 (54%), Gaps = 18/72 (25%)
Query: 144 EKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGG 203
E+ ++ SD+DVIE ++ F+A +ALGL P AK VNP+G
Sbjct: 303 ERAGLQVSDLDVIEANEAFAAQACAVTKALGLDP---AK---------------VNPNGS 344
Query: 204 LISKGHPLGATG 215
IS GHP+GATG
Sbjct: 345 GISLGHPIGATG 356
>sp|Q0HPB8|FADA_SHESM 3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain MR-4) GN=fadA
PE=3 SV=1
Length = 387
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 81/203 (39%), Gaps = 37/203 (18%)
Query: 24 HMKLYGTKPE-HFAKIAYKNHLHSTNNP------NSQFQVEYTLEQIMNSPKIFGP---- 72
H + + E FAK Y H N + + E ++E + +F P
Sbjct: 173 HQRAHAATVEGRFAKEIYGIEGHDANGALIKVLHDEVIRPETSMESLAALRPVFDPANGT 232
Query: 73 LTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGF 132
+T SDGA+A ++ E R G A + + D+ I +G+
Sbjct: 233 VTAGTSSALSDGASAMLVMEESKARALGLPIRA--------RIRSMAVAGCDAAI--MGY 282
Query: 133 DMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTY 192
A L + I +D+DVIEL++ F+A L + LGL D +D
Sbjct: 283 GPVPATQKALA-RAGITVNDLDVIELNEAFAAQSLPCVKDLGLL------DVVDEK---- 331
Query: 193 GGKHVVNPSGGLISKGHPLGATG 215
+N +GG I+ GHPLG +G
Sbjct: 332 -----INLNGGAIALGHPLGCSG 349
>sp|A4STF3|FADA_AERS4 3-ketoacyl-CoA thiolase OS=Aeromonas salmonicida (strain A449)
GN=fadA PE=3 SV=1
Length = 387
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 45/163 (27%), Positives = 72/163 (44%), Gaps = 30/163 (18%)
Query: 57 EYTLEQIMNSPKIFGPLTKLQCCPTS----DGAAAAVLASEDFVRRYGFEANAVEIVGLE 112
E T+E + +F P+ TS DGA+A ++ S D + G V + +
Sbjct: 213 ETTVETLSQLRPVFDPVNGTVTAGTSSALSDGASAMLVMSADRAKALGLTPR-VRVRSMA 271
Query: 113 MATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEA 172
+A D+ I +G+ A L ++ + DID++EL++ F+A L +
Sbjct: 272 VA-------GCDAAI--MGYGPVPATQKAL-KRAGLTIGDIDLVELNEAFAAQSLPCVKD 321
Query: 173 LGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
LGL V + K VN +GG I+ GHPLG +G
Sbjct: 322 LGLLDVAEEK---------------VNLNGGAIALGHPLGCSG 349
>sp|A0KR49|FADA_SHESA 3-ketoacyl-CoA thiolase OS=Shewanella sp. (strain ANA-3) GN=fadA
PE=3 SV=1
Length = 387
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 52/203 (25%), Positives = 81/203 (39%), Gaps = 37/203 (18%)
Query: 24 HMKLYGTKPE-HFAKIAYKNHLHSTNNP------NSQFQVEYTLEQIMNSPKIFGP---- 72
H + + E FAK Y H N + + E ++E + +F P
Sbjct: 173 HQRAHAATVEGRFAKEIYGIEGHDANGALIKVLHDEVIRPETSMESLAALRPVFDPANGT 232
Query: 73 LTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGF 132
+T SDGA+A ++ E R G A + + D+ I +G+
Sbjct: 233 VTAGTSSALSDGASAMLVMEESKARALGLPIRA--------RIRSMAVAGCDAAI--MGY 282
Query: 133 DMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTY 192
A L + I +D+DVIEL++ F+A L + LGL V + K
Sbjct: 283 GPVPATQKALA-RAGITVNDLDVIELNEAFAAQSLPCVKDLGLLDVVEDK---------- 331
Query: 193 GGKHVVNPSGGLISKGHPLGATG 215
+N +GG I+ GHPLG +G
Sbjct: 332 -----INLNGGAIALGHPLGCSG 349
>sp|Q8DDK5|FADA_VIBVU 3-ketoacyl-CoA thiolase OS=Vibrio vulnificus (strain CMCP6) GN=fadA
PE=3 SV=1
Length = 387
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 30/163 (18%)
Query: 57 EYTLEQIMNSPKIFGP----LTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLE 112
E T+E + +F P +T SDGA+A ++ SE+ G A I G+
Sbjct: 213 ETTVEGLSQLRPVFDPANGTVTAGTSSALSDGASAMLIMSEEKANELGVTIRA-RIKGMA 271
Query: 113 MATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEA 172
+A S ++G+ A L ++ + D+DVIEL++ F+A L +
Sbjct: 272 IAGCDPS---------IMGYGPVPATQKAL-KRAGLSIEDMDVIELNEAFAAQSLPCAKD 321
Query: 173 LGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
LGL V K VN +GG I+ GHPLG +G
Sbjct: 322 LGLLDVMDEK---------------VNLNGGAIALGHPLGCSG 349
>sp|Q2YVF5|THLA_STAAB Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus
(strain bovine RF122 / ET3-1) GN=SAB0304 PE=3 SV=1
Length = 393
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAA ++ SED + E AV D + D I I
Sbjct: 240 GTVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAV--------LDGFGSHGVDPSIMGI 291
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
A ++ ++++ + SDIDV EL++ F+A L L L P
Sbjct: 292 A---PVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPP------------- 335
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
VN GG I+ GHP+GA+G
Sbjct: 336 -----EKVNVKGGAIALGHPIGASG 355
>sp|Q7MQI0|FADA_VIBVY 3-ketoacyl-CoA thiolase OS=Vibrio vulnificus (strain YJ016) GN=fadA
PE=3 SV=1
Length = 387
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 47/163 (28%), Positives = 71/163 (43%), Gaps = 30/163 (18%)
Query: 57 EYTLEQIMNSPKIFGP----LTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLE 112
E T+E + +F P +T SDGA+A ++ SE+ G A I G+
Sbjct: 213 ETTVEGLSQLRPVFDPANGTVTAGTSSALSDGASAMLIMSEEKANELGVTIRA-RIKGMA 271
Query: 113 MATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEA 172
+A S ++G+ A L ++ + D+DVIEL++ F+A L +
Sbjct: 272 IAGCDPS---------IMGYGPVPATQKAL-KRAGLSIEDMDVIELNEAFAAQSLPCAKD 321
Query: 173 LGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
LGL V K VN +GG I+ GHPLG +G
Sbjct: 322 LGLLDVMDEK---------------VNLNGGAIALGHPLGCSG 349
>sp|Q8NY95|THLA_STAAW Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus
(strain MW2) GN=MW0330 PE=3 SV=1
Length = 393
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAA ++ SED + E AV D + D I I
Sbjct: 240 GTVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAV--------LDGFGSHGVDPSIMGI 291
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
A ++ ++++ + SDIDV EL++ F+A L L L P
Sbjct: 292 A---PVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPP------------- 335
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
VN GG I+ GHP+GA+G
Sbjct: 336 -----EKVNVKGGAIALGHPIGASG 355
>sp|Q6GCB8|THLA_STAAS Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus
(strain MSSA476) GN=SAS0330 PE=3 SV=1
Length = 393
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAA ++ SED + E AV D + D I I
Sbjct: 240 GTVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAV--------LDGFGSHGVDPSIMGI 291
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
A ++ ++++ + SDIDV EL++ F+A L L L P
Sbjct: 292 A---PVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPP------------- 335
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
VN GG I+ GHP+GA+G
Sbjct: 336 -----EKVNVKGGAIALGHPIGASG 355
>sp|Q2G124|THLA_STAA8 Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus
(strain NCTC 8325) GN=SAOUHSC_00336 PE=3 SV=1
Length = 393
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAA ++ SED + E AV D + D I I
Sbjct: 240 GTVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAV--------LDGFGSHGVDPSIMGI 291
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
A ++ ++++ + SDIDV EL++ F+A L L L P
Sbjct: 292 A---PVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPP------------- 335
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
VN GG I+ GHP+GA+G
Sbjct: 336 -----EKVNVKGGAIALGHPIGASG 355
>sp|Q2FJQ9|THLA_STAA3 Probable acetyl-CoA acyltransferase OS=Staphylococcus aureus
(strain USA300) GN=SAUSA300_0355 PE=3 SV=1
Length = 393
Score = 46.2 bits (108), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 41/145 (28%), Positives = 60/145 (41%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T +DGAA ++ SED + E AV D + D I I
Sbjct: 240 GTVTAGNASGINDGAAMMLVMSEDKAKELNIEPLAV--------LDGFGSHGVDPSIMGI 291
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
A ++ ++++ + SDIDV EL++ F+A L L L P
Sbjct: 292 A---PVGAVEKALKRSKKELSDIDVFELNEAFAAQSLAVDRELKLPP------------- 335
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
VN GG I+ GHP+GA+G
Sbjct: 336 -----EKVNVKGGAIALGHPIGASG 355
Database: swissprot
Posted date: Mar 23, 2013 2:32 AM
Number of letters in database: 191,569,459
Number of sequences in database: 539,616
Lambda K H
0.317 0.133 0.391
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 83,459,027
Number of Sequences: 539616
Number of extensions: 3385756
Number of successful extensions: 7434
Number of sequences better than 100.0: 50
Number of HSP's better than 100.0 without gapping: 50
Number of HSP's successfully gapped in prelim test: 243
Number of HSP's that attempted gapping in prelim test: 6965
Number of HSP's gapped (non-prelim): 326
length of query: 216
length of database: 191,569,459
effective HSP length: 113
effective length of query: 103
effective length of database: 130,592,851
effective search space: 13451063653
effective search space used: 13451063653
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 59 (27.3 bits)