RPS-BLAST 2.2.26 [Sep-21-2011]
Database: CDD.v3.10
44,354 sequences; 10,937,602 total letters
Searching..................................................done
Query= psy13256
(216 letters)
>gnl|CDD|181327 PRK08256, PRK08256, lipid-transfer protein; Provisional.
Length = 391
Score = 382 bits (983), Expect = e-134
Identities = 132/216 (61%), Positives = 165/216 (76%), Gaps = 1/216 (0%)
Query: 1 MINIAGLDSSPITAQMFGNAGLEHMKLYGTKPEHFAKIAYKNHLHSTNNPNSQFQVEYTL 60
+ + G D +P +MFG AG EHM+ YGT E FAKI K H+ NNP +QF+ EYTL
Sbjct: 133 LAELQGFDPAPPALRMFGGAGREHMEKYGTTAETFAKIGVKARRHAANNPYAQFRDEYTL 192
Query: 61 EQIMNSPKIFGPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSST 120
E ++ SP I+GPLT+LQCCP + GAAAA++ SE+F R++G + AVEIV M TDT ST
Sbjct: 193 EDVLASPMIWGPLTRLQCCPPTCGAAAAIVCSEEFARKHGLDR-AVEIVAQAMTTDTPST 251
Query: 121 FNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGK 180
F+ S I L+G+DMT+AAA ++YE+ I P DIDV+ELHDCFSANEL+TYEALGLCP G+
Sbjct: 252 FDGRSMIDLVGYDMTRAAAQQVYEQAGIGPEDIDVVELHDCFSANELLTYEALGLCPEGE 311
Query: 181 AKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATGM 216
A+ FID G NTYGG+ VVNPSGGL+SKGHPLGATG+
Sbjct: 312 AEKFIDDGDNTYGGRWVVNPSGGLLSKGHPLGATGL 347
>gnl|CDD|238425 cd00829, SCP-x_thiolase, Thiolase domain associated with sterol
carrier protein (SCP)-x isoform and related proteins;
SCP-2 has multiple roles in intracellular lipid
circulation and metabolism. The N-terminal presequence
in the SCP-x isoform represents a peroxisomal
3-ketacyl-Coa thiolase specific for branched-chain acyl
CoAs, which is proteolytically cleaved from the sterol
carrier protein.
Length = 375
Score = 275 bits (705), Expect = 1e-92
Identities = 89/206 (43%), Positives = 114/206 (55%), Gaps = 5/206 (2%)
Query: 11 PITAQMFGNAGLEHMKLYGTKPEHFAKIAYKNHLHSTNNPNSQFQVEYTLEQIMNSPKIF 70
++ A +M YGT E AK+A KNH ++ NP +QF+ T+E ++NS I
Sbjct: 134 LTPPALYALAARRYMHRYGTTREDLAKVAVKNHRNAARNPYAQFRKPITVEDVLNSRMIA 193
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
PL L CCP SDGAAA VLASE+ R V I+G+ A+DT S D +
Sbjct: 194 DPLRLLDCCPVSDGAAAVVLASEERARELT--DRPVWILGVGAASDTPSLSERDD---FL 248
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
D + AA R Y+ I P DIDV EL+DCF+ EL+ E LG C G+ + G
Sbjct: 249 SLDAARLAARRAYKMAGITPDDIDVAELYDCFTIAELLALEDLGFCEKGEGGKLVREGDT 308
Query: 191 TYGGKHVVNPSGGLISKGHPLGATGM 216
GG VN SGGL+SKGHPLGATG+
Sbjct: 309 AIGGDLPVNTSGGLLSKGHPLGATGL 334
>gnl|CDD|238422 cd00826, nondecarbox_cond_enzymes, nondecarboxylating condensing
enzymes; In general, thiolases catalyze the reversible
thiolytic cleavage of 3-ketoacyl-CoA into acyl-CoA and
acetyl-CoA, a 2-step reaction involving a covalent
intermediate formed with a catalytic cysteine. There are
2 functional different classes: thiolase-I
(3-ketoacyl-CoA thiolase) and thiolase-II
(acetoacetyl-CoA thiolase). Thiolase-I can cleave longer
fatty acid molecules and plays an important role in the
beta-oxidative degradation of fatty acids. Thiolase-II
has a high substrate specificity. Although it can cleave
acetoacyl-CoA, its main function is the synthesis of
acetoacyl-CoA from two molecules of acetyl-CoA, which
gives it importance in several biosynthetic pathways.
Length = 393
Score = 238 bits (609), Expect = 5e-78
Identities = 90/222 (40%), Positives = 124/222 (55%), Gaps = 6/222 (2%)
Query: 1 MINIAGLDSSPITAQMFGNAGLEHMKLYGTKPEHFAKIAYKN---HLHSTNNPNSQFQVE 57
+IN G+ + P + G AG E + G + FAK K +HS + QF E
Sbjct: 131 LINKYGMRACPDAFALAGQAGAEAAEKDGRFKDEFAKFGVKGRKGDIHSDADEYIQFGDE 190
Query: 58 YTLEQIMNSPKIF---GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMA 114
+L++I F LT C +DGAAAA+L SE +++G ++ A EI LEM
Sbjct: 191 ASLDEIAKLRPAFDKEDFLTAGNACGLNDGAAAAILMSEAEAQKHGLQSKAREIQALEMI 250
Query: 115 TDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALG 174
TD +STF IK++G D AA + EK + D+D+IE HD F+AN T EALG
Sbjct: 251 TDMASTFEDKKVIKMVGGDGPIEAARKALEKAGLGIGDLDLIEAHDAFAANACATNEALG 310
Query: 175 LCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATGM 216
LCP G+ +D G NTYGGK ++NP+GG I+ GHP+GA+G
Sbjct: 311 LCPEGQGGALVDRGDNTYGGKSIINPNGGAIAIGHPIGASGA 352
>gnl|CDD|235688 PRK06064, PRK06064, acetyl-CoA acetyltransferase; Provisional.
Length = 389
Score = 208 bits (531), Expect = 4e-66
Identities = 81/192 (42%), Positives = 108/192 (56%), Gaps = 5/192 (2%)
Query: 24 HMKLYGTKPEHFAKIAYKNHLHSTNNPNSQFQVEYTLEQIMNSPKIFGPLTKLQCCPTSD 83
+M YGT E A +A KNH + + NP +QFQ E T+EQ++NSP + PL L C P +D
Sbjct: 154 YMHKYGTTEEDLALVAVKNHYNGSKNPYAQFQKEITVEQVLNSPPVADPLKLLDCSPITD 213
Query: 84 GAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRLY 143
GAAA +LASE+ + Y V I A+DT + + D AA++ Y
Sbjct: 214 GAAAVILASEEKAKEY--TDTPVWIKASGQASDTIALHDRKD---FTTLDAAVVAAEKAY 268
Query: 144 EKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGG 203
+ I+P DIDV E+HDCF+ E++ YE LG G+ G GG VNPSGG
Sbjct: 269 KMAGIEPKDIDVAEVHDCFTIAEILAYEDLGFAKKGEGGKLAREGQTYIGGDIPVNPSGG 328
Query: 204 LISKGHPLGATG 215
L +KGHP+GATG
Sbjct: 329 LKAKGHPVGATG 340
>gnl|CDD|183606 PRK12578, PRK12578, acetyl-CoA acetyltransferase; Provisional.
Length = 385
Score = 168 bits (428), Expect = 6e-51
Identities = 75/193 (38%), Positives = 109/193 (56%), Gaps = 4/193 (2%)
Query: 24 HMKLYGTKPEHFAKIAYKNHLHSTNNPNSQFQVEYTLEQIMNSPKIFGPLTKLQCCPTSD 83
HM +YGT E A ++ K H + NP + FQ T+E+++ S I P+ L CP SD
Sbjct: 152 HMAVYGTTEEQMALVSVKAHKYGAMNPKAHFQKPVTVEEVLKSRAISWPIKLLDSCPISD 211
Query: 84 GAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRLY 143
G+A A+ ASE+ V+ + + V I G+ A D + + +GF T+ AA + Y
Sbjct: 212 GSATAIFASEEKVKELKID-SPVWITGIGYANDYAYVARR---GEWVGFKATQLAARQAY 267
Query: 144 EKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGG 203
++ P+DI+V +HD F+ E++ YE LG GK FI+ G + GGK VN GG
Sbjct: 268 NMAKVTPNDIEVATVHDAFTIAEIMGYEDLGFTEKGKGGKFIEEGQSEKGGKVGVNLFGG 327
Query: 204 LISKGHPLGATGM 216
L +KGHPLGATG+
Sbjct: 328 LKAKGHPLGATGL 340
>gnl|CDD|223261 COG0183, PaaJ, Acetyl-CoA acetyltransferase [Lipid metabolism].
Length = 392
Score = 165 bits (421), Expect = 1e-49
Identities = 72/208 (34%), Positives = 95/208 (45%), Gaps = 16/208 (7%)
Query: 11 PITAQMFGNAGLEHMKLYGTKPEHFAKIAYKNHLHSTNNPNSQFQVEYTLEQIMNSPKIF 70
+TA+ + K YG E ++A K+H ++ NP + F E T E ++NSP +
Sbjct: 157 GLTAER-------YAKRYGISREDQDEVAVKSHKNAAANPKAGFFDEITPEDVLNSPVVA 209
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
PL +L C PTSDGAAA V A E+ NA I A S K
Sbjct: 210 DPLRRLDCSPTSDGAAALVPAFEEVGGTV-TAGNASGINDGAAALLLMSE------SKAK 262
Query: 131 GFDMTKAAADRLYEKTQIKPS--DIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSG 188
+ AA R Y + PS D V +HD + L+ E LGL G+A + G
Sbjct: 263 ELGLAPLAAIRAYAMAGVDPSIMDGPVAAVHDALTIAGLLALEDLGLAEKGEAFAAVALG 322
Query: 189 ANTYGGKHVVNPSGGLISKGHPLGATGM 216
G VNPSGG I+ GHP+GATG
Sbjct: 323 VTKILGDLPVNPSGGAIALGHPIGATGA 350
>gnl|CDD|235785 PRK06365, PRK06365, acetyl-CoA acetyltransferase; Provisional.
Length = 430
Score = 146 bits (370), Expect = 5e-42
Identities = 80/213 (37%), Positives = 115/213 (53%), Gaps = 22/213 (10%)
Query: 24 HMKLYGTKPEHFAKIAYKNHLHSTNNPNSQFQVEYTLEQIMNSPKIFGPLTKLQCCPTSD 83
HM +GT E AK++ KNH ++ +NP +Q ++ T+E + SP + PLT+L C SD
Sbjct: 168 HMYEFGTTVEQLAKVSVKNHGNAIHNPFAQSPMKITVEDVRKSPMVSYPLTRLDVCAMSD 227
Query: 84 GAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNS-DSCIKLI------------ 130
GAA A+LASED + + V I + +DT + + L+
Sbjct: 228 GAACAILASED--KAFEITDKPVLIKAIGTGSDTLRLADRPFGEVPLLPNESPDDYKDLR 285
Query: 131 -----GFDMTKAAADRLYEKTQIK-PS-DIDVIELHDCFSANELITYEALGLCPVGKAKD 183
F + AA YE I P D+D+IELHD ++++E+ TYE LGLC G+
Sbjct: 286 YPGVHSFRAGRMAAKEAYEMAGITDPLNDLDLIELHDAYTSSEIQTYEDLGLCKYGEGGQ 345
Query: 184 FIDSGANTYGGKHVVNPSGGLISKGHPLGATGM 216
FI+SG GK VNPSGGL++ GH +GATG+
Sbjct: 346 FIESGKPELPGKLPVNPSGGLLAAGHAVGATGI 378
>gnl|CDD|180373 PRK06059, PRK06059, lipid-transfer protein; Provisional.
Length = 399
Score = 143 bits (362), Expect = 5e-41
Identities = 71/194 (36%), Positives = 100/194 (51%), Gaps = 10/194 (5%)
Query: 25 MKLYGTKPEHFAKIAYKNHLHSTNNPNSQFQVEYTLEQIMNSPKIFGPLTKLQCCPTSDG 84
M LYG E FA++ KN H NPN++++ E T+E ++ SP + PL L C TSDG
Sbjct: 155 MDLYGATVEDFAQVKVKNARHGLLNPNARYRKEVTVEDVLASPVVSDPLRLLDICATSDG 214
Query: 85 AAAAVLASEDFVRRYGFE-ANAVEIVGLEMATDTSS-------TFNSDSCIKLIGFDMT- 135
AAA ++AS+ F RR+ A + + T +DS + +
Sbjct: 215 AAALIVASKSFARRHLGSVAGVPSVRAISTVTPRYPQHLPELPDIATDSTAAVPAPERVF 274
Query: 136 -KAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGG 194
D Y + I P D+ + E++D +A EL YE LGLCP G+A+ + SGA T GG
Sbjct: 275 KDQILDAAYAEAGIGPEDLSLAEVYDLSTALELDWYEHLGLCPKGEAEALLRSGATTLGG 334
Query: 195 KHVVNPSGGLISKG 208
+ VNPSGGL G
Sbjct: 335 RIPVNPSGGLACFG 348
>gnl|CDD|181013 PRK07516, PRK07516, acetyl-CoA acetyltransferase; Provisional.
Length = 389
Score = 140 bits (354), Expect = 8e-40
Identities = 73/206 (35%), Positives = 98/206 (47%), Gaps = 11/206 (5%)
Query: 14 AQMFGNAGLEHMKLYGTKPEHFAKIAYKNHLHSTNNPNSQFQVEYTLEQIMN----SPKI 69
A +FG + + YG + + A IA KNH + NP +Q + + E +P +
Sbjct: 144 AGVFGRIAQAYFQRYGDQSDALAMIAAKNHANGVANPYAQMRKDLGFEFCRTVSEKNPLV 203
Query: 70 FGPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKL 129
GPL + C SDGAAA VLA + R AV D F S
Sbjct: 204 AGPLRRTDCSLVSDGAAALVLADAETARAL---QRAVRFRARAHVND----FLPLSRRDP 256
Query: 130 IGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGA 189
+ F+ + A R + + D+ +E HDCF+ ELI YEA+GL P G+ I G
Sbjct: 257 LAFEGPRRAWQRALAQAGVTLDDLSFVETHDCFTIAELIEYEAMGLAPPGQGARAIREGW 316
Query: 190 NTYGGKHVVNPSGGLISKGHPLGATG 215
GK VNPSGGL +KGHP+GATG
Sbjct: 317 TAKDGKLPVNPSGGLKAKGHPIGATG 342
>gnl|CDD|180433 PRK06157, PRK06157, acetyl-CoA acetyltransferase; Validated.
Length = 398
Score = 137 bits (347), Expect = 7e-39
Identities = 63/186 (33%), Positives = 96/186 (51%), Gaps = 10/186 (5%)
Query: 36 AKIAYKNHLHSTNNPNSQFQVEYTLEQIMNSPKIFGPLTKLQCCPTSDGAAAAVLASEDF 95
A ++ K+H + NP + + T EQ++ +P I GPL CC SDGAAAA++ + +
Sbjct: 171 AHVSVKSHANGARNPKAHLRKAVTEEQVLKAPMIAGPLGLFDCCGVSDGAAAAIVTTPEI 230
Query: 96 VRRYGFEANAVEIVGLEMATDT--SSTFNSDSCIKLIGFDMTKAAADRLYEKTQIK-P-S 151
R G + + V + L++A +N F T+ AA + Y + I P
Sbjct: 231 ARALGKK-DPVYVKALQLAVSNGWELQYNGWD---GSYFPTTRIAARKAYREAGITDPRE 286
Query: 152 DIDVIELHDCFSANELITYEALGLCPVGKA-KDFIDSGANTYGGKHVVNPSGGLISKGHP 210
++ + E+HDCFS EL+T E LGL G+A +D +D G G GGL GHP
Sbjct: 287 ELSMAEVHDCFSITELVTMEDLGLSERGQAWRDVLD-GFFDADGGLPCQIDGGLKCFGHP 345
Query: 211 LGATGM 216
+GA+G+
Sbjct: 346 IGASGL 351
>gnl|CDD|235771 PRK06289, PRK06289, acetyl-CoA acetyltransferase; Provisional.
Length = 403
Score = 130 bits (329), Expect = 4e-36
Identities = 67/215 (31%), Positives = 101/215 (46%), Gaps = 21/215 (9%)
Query: 15 QMFGNAGLEHMKLYGTKPEHFAKIAYKNHLHSTNNPNSQ-----FQVEYTLEQIMNSPKI 69
MF E+ + YG EH IA N ++ NPN+Q F E T + +P +
Sbjct: 151 SMFARVADEYDRRYGLDEEHLRAIAEINFANARRNPNAQTRGWAFPDEATNDDDATNPVV 210
Query: 70 FGPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEI---------VGLEMATDTSST 120
G L + C +DG A VLAS+ ++R Y I +GLE D S+
Sbjct: 211 EGRLRRQDCSQVTDGGAGVVLASDAYLRDYADARPIPRIKGWGHRTAPLGLEQKLDRSA- 269
Query: 121 FNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGK 180
D + + A Y + + D+D E+HDCF+ +E + + +GL G+
Sbjct: 270 --GDPYV----LPHVRQAVLDAYRRAGVGLDDLDGFEVHDCFTPSEYLAIDHIGLTGPGE 323
Query: 181 AKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
+ I++G GG+ +NPSGGLI GHP+GA+G
Sbjct: 324 SWKAIENGEIAIGGRLPINPSGGLIGGGHPVGASG 358
>gnl|CDD|180380 PRK06066, PRK06066, acetyl-CoA acetyltransferase; Provisional.
Length = 385
Score = 119 bits (300), Expect = 4e-32
Identities = 63/202 (31%), Positives = 98/202 (48%), Gaps = 13/202 (6%)
Query: 20 AGLE---HMKLYGTKPEHFAKIAYKNHLHSTNNPNSQFQVEYTLEQIMNSPKIFGPLTKL 76
AGL+ M G E A + KN +NP + + +LE +++S + PLT+L
Sbjct: 146 AGLDAVKFMSRKGITREDLALVVEKNKKAGLSNPRASYASNISLEDVLSSEYVVYPLTEL 205
Query: 77 QCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDM-T 135
P DGA VLASE+ ++ + V I G+ +T++S+ ++ +G
Sbjct: 206 DIAPFVDGAIVVVLASEEVAKKL--TDDPVWIKGIGWSTESSNLETAE-----LGKANYM 258
Query: 136 KAAADRLYEKTQI-KPS-DIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYG 193
+ AAD Y+ I P ++D E+ D +S EL EAL L + + G
Sbjct: 259 RIAADMAYKMAGIESPRKEVDAAEVDDRYSYKELQHIEALRLSEEPEKDSLLREGNFDPQ 318
Query: 194 GKHVVNPSGGLISKGHPLGATG 215
G+ VNPSGG ++KG PL A+G
Sbjct: 319 GELPVNPSGGHLAKGVPLEASG 340
>gnl|CDD|240424 PTZ00455, PTZ00455, 3-ketoacyl-CoA thiolase; Provisional.
Length = 438
Score = 118 bits (296), Expect = 3e-31
Identities = 71/198 (35%), Positives = 99/198 (50%), Gaps = 18/198 (9%)
Query: 33 EHFAKIAYKNHLHSTNNPNSQ-FQVEYTLEQIMN----SPKIFGP------LTKLQCCPT 81
E A++A K + + NP + + +LE +PK G L C
Sbjct: 199 EDTARVAAKAYANGNKNPLAHMHTRKLSLEFCTGASDKNPKFLGNETYKPFLRMTDCSQV 258
Query: 82 SDGAAAAVLASEDFVRRYGFEAN---AVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAA 138
SDG A VLASE+ +++ G N VEI L A+ D+ ++AA
Sbjct: 259 SDGGAGLVLASEEGLQKMGLSPNDSRLVEIKSLACASGNLYEDPPDATRMF----TSRAA 314
Query: 139 ADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVV 198
A + +KPSD+ V E+HDCF+ EL+ YEALG+ G AKD I +GA G+ V
Sbjct: 315 AQKALSMAGVKPSDLQVAEVHDCFTIAELLMYEALGIAEYGHAKDLIRNGATALEGRIPV 374
Query: 199 NPSGGLISKGHPLGATGM 216
N GGL+S GHP+GATG+
Sbjct: 375 NTGGGLLSFGHPVGATGV 392
>gnl|CDD|181378 PRK08313, PRK08313, acetyl-CoA acetyltransferase; Provisional.
Length = 386
Score = 104 bits (261), Expect = 2e-26
Identities = 67/217 (30%), Positives = 102/217 (47%), Gaps = 16/217 (7%)
Query: 10 SPITAQMFGNAG-------LEHMKLYGTKPEHFAKIAYKNHLHSTNNPNSQF-QVEYTLE 61
P T + AG +++ G A +A K+ L+ NP + Q + TLE
Sbjct: 129 VPFTKPVGAGAGGYFAPHVRAYIRRSGAPEHIGAMVAVKDRLNGAKNPYAHLHQPDITLE 188
Query: 62 QIMNSPKIFGPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTF 121
++M S ++ P+ + CP+SDGA A V+ E+ A I G M T+ +
Sbjct: 189 KVMASQMLWDPIRFDETCPSSDGACAVVIGDEEAADAAAGRPVAW-IHGTAMRTEPLAFA 247
Query: 122 NSDSCIKLIGFDMTKAAADRLYEKTQIKP--SDIDVIELHDCFSANELITYEALGLCPVG 179
D G D AAA L++ I +IDV E++ FS E + E LG P G
Sbjct: 248 GRDQVNPQAGRD---AAAA-LWKAAGITDPRDEIDVAEIYVPFSWFEPMWLENLGFAPEG 303
Query: 180 KAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATGM 216
+ ++G GG+ VNPSGG++S +P+GA+GM
Sbjct: 304 EGWKLTEAGETAIGGRLPVNPSGGVLS-SNPIGASGM 339
>gnl|CDD|181147 PRK07855, PRK07855, lipid-transfer protein; Provisional.
Length = 386
Score = 103 bits (258), Expect = 5e-26
Identities = 60/187 (32%), Positives = 86/187 (45%), Gaps = 8/187 (4%)
Query: 24 HMKLYGTKPEHFAKIAYKNHLHSTNNPNSQF-QVEYTLEQIMNSPKIFGPLTKLQCCPTS 82
+M YG E F ++A + H+ NP + F TLE NS I PL L CC S
Sbjct: 157 YMHEYGATSEDFGRVAVADRKHAATNPKAWFYGRPITLEDHQNSRWIAEPLRLLDCCQES 216
Query: 83 DGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDT---SSTFNSDSCIKLIGFDMTKAAA 139
DGA A V+ S + R ++ D +S + D + G A
Sbjct: 217 DGAVALVVTSAERARDLKQRPAVIKAAAQGSGADQYMMTSYYRDD----ITGLPEMGLVA 272
Query: 140 DRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVN 199
+L+ ++ + P+DID L+D F+ L+ E LG C G+AKDFI GA GG+ +N
Sbjct: 273 RQLWAQSGLGPADIDTAILYDHFTPFVLMQLEELGFCGRGEAKDFIADGALELGGRLPIN 332
Query: 200 PSGGLIS 206
GG +
Sbjct: 333 THGGQLG 339
>gnl|CDD|180434 PRK06158, PRK06158, thiolase; Provisional.
Length = 384
Score = 101 bits (253), Expect = 3e-25
Identities = 63/210 (30%), Positives = 98/210 (46%), Gaps = 20/210 (9%)
Query: 11 PITAQMFGNAGLEHMKLYGTKPEHFAKIAYKNHLHSTNNPNSQFQVEYTLEQIMNSPKIF 70
P++A + A HM YGT E A++A + NP + + T++ ++ + +
Sbjct: 140 PVSA--YALAAARHMHQYGTTREQLAEVAVAARQWAQLNPEAFMRDPLTIDDVLAARMVS 197
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
PL+ CC +DGA A V+ D R V ++G AT S +
Sbjct: 198 DPLSVRDCCLVTDGAGAVVMVRAD--RARDLPRPPVYVLGAAAAT----WHRQISSMP-- 249
Query: 131 GFDMTKAAA----DRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFID 186
D+T AA R + + P+DIDV+EL+D F+ N ++ E LG C G+ F++
Sbjct: 250 --DLTVTAAAESGPRAFAMAGLTPADIDVVELYDAFTINTILFLEDLGFCAKGEGGAFVE 307
Query: 187 SGANTYGGKHVVNPSGGLISKGHPLGATGM 216
G GG+ VN +GG +S HP GM
Sbjct: 308 GGRIAPGGRLPVNTNGGGLSCVHP----GM 333
>gnl|CDD|238201 cd00327, cond_enzymes, Condensing enzymes; Family of enzymes that
catalyze a (decarboxylating or non-decarboxylating)
Claisen-like condensation reaction. Members are share
strong structural similarity, and are involved in the
synthesis and degradation of fatty acids, and the
production of polyketides, a diverse group of natural
products.
Length = 254
Score = 97.1 bits (242), Expect = 1e-24
Identities = 41/138 (29%), Positives = 54/138 (39%), Gaps = 22/138 (15%)
Query: 79 CPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAA 138
DGAAAAV+ SE+ R G T++TF+ S + + + A
Sbjct: 98 FVFGDGAAAAVVESEEHALRRG-------AHPQAEIVSTAATFDGASMVPAVSGEGLARA 150
Query: 139 ADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVV 198
A + E + PSDID +E H + ALGL P G
Sbjct: 151 ARKALEGAGLTPSDIDYVEAHGTGTPIGDAVELALGLDPD---------------GVRSP 195
Query: 199 NPSGGLISKGHPLGATGM 216
S LI GHPLGA G+
Sbjct: 196 AVSATLIMTGHPLGAAGL 213
>gnl|CDD|180379 PRK06065, PRK06065, acetyl-CoA acetyltransferase; Provisional.
Length = 392
Score = 99.1 bits (247), Expect = 1e-24
Identities = 67/196 (34%), Positives = 96/196 (48%), Gaps = 10/196 (5%)
Query: 24 HMKLYGTKPEHFAKIAYKNHLHSTNNPNSQFQVEYTLEQIMNSPKIFGPLTKLQCCPTSD 83
+M YG K E A ++ KN ++ NNP +Q + T+E ++ S + P+ L P SD
Sbjct: 159 YMATYGIKKEEIALVSVKNKRNALNNPYAQLGSKITVEDVLKSEVLVWPVQLLDVSPVSD 218
Query: 84 GAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRL- 142
GAAA VLASED RRY V + G+ D + N D + + A R+
Sbjct: 219 GAAAIVLASEDLARRY--TDTPVWVEGVGWTLDNTEWPNRD-----LAYPRYVEFAARMA 271
Query: 143 YEKTQI-KP-SDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNP 200
Y+ I +P +IDV E +D F EL E L L G+A + G G +P
Sbjct: 272 YKMAGIERPRKEIDVAEPYDPFDYKELHHLEGLQLAKRGEAPKLLKEGVFDIDGDIPSSP 331
Query: 201 SGGLISKGHPLGATGM 216
SGGL+ G+P+ A G+
Sbjct: 332 SGGLLGVGNPIAAAGL 347
>gnl|CDD|236164 PRK08142, PRK08142, acetyl-CoA acetyltransferase; Provisional.
Length = 388
Score = 97.1 bits (242), Expect = 8e-24
Identities = 58/212 (27%), Positives = 90/212 (42%), Gaps = 16/212 (7%)
Query: 10 SPITAQMFGNAGLEHMKLYGTKPEHFAKIAYKNHLHSTNNPNSQFQVEYTLEQIMNSPKI 69
P T ++ + HM YGT E A I H+ +NP++ + T+E ++NSP I
Sbjct: 139 GPTTHNLYAMCAMRHMHEYGTTSEQLAWIKVAASHHAQHNPHAMLRDVVTVEDVLNSPMI 198
Query: 70 FGPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKL 129
PL +L CC +DG A V+ + R + V+++G A
Sbjct: 199 ADPLHRLDCCVVTDGGGALVVVRPEIARS--LKRPLVKVLGAGEAIKGQMGGK------- 249
Query: 130 IGFDMTKAAA----DRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFI 185
D+T + A + + + P+DI ++D F+ L+ E LG C G+ F+
Sbjct: 250 --VDLTYSGAAWSGPAAFAEAGVTPADIKYASIYDSFTITVLMQLEDLGFCKKGEGGKFV 307
Query: 186 DSGANTYG-GKHVVNPSGGLISKGHPLGATGM 216
G G GK N GG + HP GM
Sbjct: 308 ADGNLISGVGKLPFNTDGGGLCNNHPANRGGM 339
>gnl|CDD|238383 cd00751, thiolase, Thiolase are ubiquitous enzymes that catalyze
the reversible thiolytic cleavage of 3-ketoacyl-CoA into
acyl-CoA and acetyl-CoA, a 2-step reaction involving a
covalent intermediate formed with a catalytic cysteine.
They are found in prokaryotes and eukaryotes (cytosol,
microbodies and mitochondria). There are 2 functional
different classes: thiolase-I (3-ketoacyl-CoA thiolase)
and thiolase-II (acetoacetyl-CoA thiolase). Thiolase-I
can cleave longer fatty acid molecules and plays an
important role in the beta-oxidative degradation of
fatty acids. Thiolase-II has a high substrate
specificity. Although it can cleave acetoacyl-CoA, its
main function is the synthesis of acetoacyl-CoA from two
molecules of acetyl-CoA, which gives it importance in
several biosynthetic pathways.
Length = 386
Score = 81.0 bits (201), Expect = 5e-18
Identities = 41/141 (29%), Positives = 61/141 (43%), Gaps = 37/141 (26%)
Query: 79 CPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMA-TDTSSTFNSDSCIKLIGFDMTKA 137
+DGAAA +L SE+ + G + A IVG +A D + M
Sbjct: 242 SGINDGAAAVLLMSEEKAKELGLKPLAR-IVGYAVAGVDPA--------------IMGIG 286
Query: 138 ---AADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGG 194
A + ++ + DID+IE+++ F+A L + LGL K
Sbjct: 287 PVPAIPKALKRAGLTLDDIDLIEINEAFAAQALACLKELGL-DPEK-------------- 331
Query: 195 KHVVNPSGGLISKGHPLGATG 215
VN +GG I+ GHPLGA+G
Sbjct: 332 ---VNVNGGAIALGHPLGASG 349
>gnl|CDD|181173 PRK07937, PRK07937, lipid-transfer protein; Provisional.
Length = 352
Score = 72.0 bits (177), Expect = 6e-15
Identities = 54/184 (29%), Positives = 83/184 (45%), Gaps = 29/184 (15%)
Query: 33 EHFAKIAYKNHLHSTNNPNSQFQVEYTLEQIMNSPKIFGPLTKLQCCPTSDGAAAAVLAS 92
E A++A ++ + NP+++ + ++++++ P PL + P +DGAAA VLA+
Sbjct: 158 EQMAEVAARSRADARRNPSAEPSI--SVDELLARPYFADPLRRHDIAPITDGAAAVVLAA 215
Query: 93 EDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSD 152
D R I G+E ++ S D L T AA+ T
Sbjct: 216 GDRARE--LRERPAWITGIEHRIESPSLGARD----LTRSPSTALAAEAA---TGGDAGG 266
Query: 153 IDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLG 212
+DV ELH F+ ELI EALGL G K VNPSGG ++ +P+
Sbjct: 267 VDVAELHAPFTHQELILREALGL-----------------GDKTKVNPSGGALA-ANPMF 308
Query: 213 ATGM 216
A G+
Sbjct: 309 AAGL 312
>gnl|CDD|233642 TIGR01930, AcCoA-C-Actrans, acetyl-CoA acetyltransferases. This
model represents a large family of enzymes which
catalyze the thiolysis of a linear fatty acid CoA (or
acetoacetyl-CoA) using a second CoA molecule to produce
acetyl-CoA and a CoA-ester product two carbons shorter
(or, alternatively, the condensation of two molecules of
acetyl-CoA to produce acetoacetyl-CoA and CoA). This
enzyme is also known as "thiolase", "3-ketoacyl-CoA
thiolase", "beta-ketothiolase" and "Fatty oxidation
complex beta subunit". When catalyzing the degradative
reaction on fatty acids the corresponding EC number is
2.3.1.16. The condensation reaction corresponds to
2.3.1.9. Note that the enzymes which catalyze the
condensation are generally not involved in fatty acid
biosynthesis, which is carried out by a decarboxylating
condensation of acetyl and malonyl esters of acyl
carrier proteins. Rather, this activity may produce
acetoacetyl-CoA for pathways such as IPP biosynthesis in
the absence of sufficient fatty acid oxidation [Fatty
acid and phospholipid metabolism, Other].
Length = 386
Score = 71.5 bits (176), Expect = 1e-14
Identities = 48/162 (29%), Positives = 69/162 (42%), Gaps = 32/162 (19%)
Query: 57 EYTLEQIMNSPKIF---GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEM 113
TLE++ F G +T P +DGAAA +L SE+ + G A IV
Sbjct: 218 NTTLEKLAKLKPAFDPNGTVTAGNSSPLNDGAAALLLMSEEKAKELGLTPLA-RIVS--- 273
Query: 114 ATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEAL 173
+ D I +G A + +K + SDID+ E+++ F+A L + L
Sbjct: 274 ----YAVAGVDPEIMGLG---PVPAIPKALKKAGLSISDIDLFEINEAFAAQVLACIKEL 326
Query: 174 GLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
GL K VN +GG I+ GHPLGA+G
Sbjct: 327 GLDL---EK---------------VNVNGGAIALGHPLGASG 350
>gnl|CDD|131483 TIGR02430, pcaF, 3-oxoadipyl-CoA thiolase. Members of this family
are designated beta-ketoadipyl CoA thiolase, an enzyme
that acts at the end of pathways for the degradation of
protocatechuate (from benzoate and related compounds)
and of phenylacetic acid.
Length = 400
Score = 71.4 bits (175), Expect = 1e-14
Identities = 51/162 (31%), Positives = 72/162 (44%), Gaps = 30/162 (18%)
Query: 57 EYTLEQIMNSPKIFGP---LTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEM 113
E TLE + + P +T +DGAAA +LASE+ V+R+G A I+
Sbjct: 228 ETTLEGLAKLKPVVRPDGTVTAGNASGVNDGAAALLLASEEAVQRHGLTPRA-RILA--A 284
Query: 114 ATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEAL 173
AT +++G A +L + + DVIEL++ F+A L L
Sbjct: 285 ATAGVEP-------RIMGIGPV-PATQKLLARAGLSIDQFDVIELNEAFAAQALAVLREL 336
Query: 174 GLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
GL D A VNP+GG I+ GHPLGA+G
Sbjct: 337 GLA---------DDDAR-------VNPNGGAIALGHPLGASG 362
>gnl|CDD|181624 PRK09050, PRK09050, beta-ketoadipyl CoA thiolase; Validated.
Length = 401
Score = 66.9 bits (164), Expect = 5e-13
Identities = 44/133 (33%), Positives = 61/133 (45%), Gaps = 27/133 (20%)
Query: 83 DGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRL 142
DGAAA +LASE +++G A I+G MAT +++G A +L
Sbjct: 258 DGAAALLLASEAAAKKHGLTPRA-RILG--MATAGVEP-------RIMGIGPAPATR-KL 306
Query: 143 YEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSG 202
+ + DVIEL++ F+A L LGL D A VNP+G
Sbjct: 307 LARLGLTIDQFDVIELNEAFAAQGLAVLRQLGLA---------DDDAR-------VNPNG 350
Query: 203 GLISKGHPLGATG 215
G I+ GHPLG +G
Sbjct: 351 GAIALGHPLGMSG 363
>gnl|CDD|181626 PRK09052, PRK09052, acetyl-CoA acetyltransferase; Provisional.
Length = 399
Score = 65.4 bits (160), Expect = 1e-12
Identities = 46/146 (31%), Positives = 62/146 (42%), Gaps = 51/146 (34%)
Query: 81 TSDGAAAAVLASEDFVRRYG------FEANAV-----EIVGLEMATDTSSTFNSDSCIKL 129
TSDGA A +L SE ++++ F + AV EI+G
Sbjct: 256 TSDGAGAVILVSEKALKQFNLTPLARFVSFAVAGVPPEIMG------------------- 296
Query: 130 IGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGA 189
IG A ++ +K D+D IEL++ F+A L LGL P +K
Sbjct: 297 IG---PIEAIPAALKQAGLKQDDLDWIELNEAFAAQSLAVIRDLGLDP---SK------- 343
Query: 190 NTYGGKHVVNPSGGLISKGHPLGATG 215
VNP GG I+ GHPLGATG
Sbjct: 344 --------VNPLGGAIALGHPLGATG 361
>gnl|CDD|183998 PRK13359, PRK13359, beta-ketoadipyl CoA thiolase; Provisional.
Length = 400
Score = 65.6 bits (160), Expect = 1e-12
Identities = 49/162 (30%), Positives = 72/162 (44%), Gaps = 30/162 (18%)
Query: 57 EYTLEQIMNSPKIF---GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEM 113
E TLE + + G +T +DGA A +LASE RR+G + A ++G +
Sbjct: 228 ETTLEALAKLKGVVRPDGTVTAGNASGVNDGACALLLASEAAARRHGLKPRA-RVLG--I 284
Query: 114 ATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEAL 173
AT +++G A +L + + DVIEL++ F++ L L
Sbjct: 285 ATAGVEP-------RVMGIG-PAPATQKLLARLGMTLDQFDVIELNEAFASQGLAVLREL 336
Query: 174 GLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
GL D A VNP+GG I+ GHPLGA+G
Sbjct: 337 GLA---------DDDAR-------VNPNGGAIALGHPLGASG 362
>gnl|CDD|236197 PRK08242, PRK08242, acetyl-CoA acetyltransferase; Validated.
Length = 402
Score = 61.4 bits (150), Expect = 3e-11
Identities = 45/133 (33%), Positives = 61/133 (45%), Gaps = 29/133 (21%)
Query: 83 DGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRL 142
DGAAA ++ SE+ + G + A IV AT T SD I L G A +
Sbjct: 261 DGAAAVLIGSEEAGKALGLKPRA-RIV----ATATIG---SDPTIMLTG---PVPATRKA 309
Query: 143 YEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSG 202
K + DID+ EL++ F++ L +AL + P K VN +G
Sbjct: 310 LAKAGLTVDDIDLFELNEAFASVVLRFMQALDI-PHDK-----------------VNVNG 351
Query: 203 GLISKGHPLGATG 215
G I+ GHPLGATG
Sbjct: 352 GAIAMGHPLGATG 364
>gnl|CDD|181123 PRK07801, PRK07801, acetyl-CoA acetyltransferase; Provisional.
Length = 382
Score = 59.7 bits (145), Expect = 1e-10
Identities = 51/146 (34%), Positives = 66/146 (45%), Gaps = 31/146 (21%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G LT SDGA+A +LASE V+R+G A I L + D D L
Sbjct: 229 GRLTAAVASQISDGASAVLLASERAVKRHGLTPRA-RIHHLSVRGD-------DPVFMLT 280
Query: 131 G-FDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGA 189
T+ A EKT + DIDV+E+++ F+ L + G P AK
Sbjct: 281 APIPATRYA----LEKTGLSIDDIDVVEINEAFAPVVLAWLKETGADP---AK------- 326
Query: 190 NTYGGKHVVNPSGGLISKGHPLGATG 215
VNP+GG I+ GHPLGATG
Sbjct: 327 --------VNPNGGAIALGHPLGATG 344
>gnl|CDD|181625 PRK09051, PRK09051, beta-ketothiolase; Provisional.
Length = 394
Score = 56.5 bits (137), Expect = 1e-09
Identities = 46/134 (34%), Positives = 58/134 (43%), Gaps = 31/134 (23%)
Query: 83 DGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIG-FDMTKAAADR 141
DGAAA VLA D G + A +VG A D IG T+ A
Sbjct: 253 DGAAAVVLAEADAAEARGLKPLA-RLVGYAHA-------GVDPEYMGIGPVPATQKA--- 301
Query: 142 LYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPS 201
E+ + +D+DVIE ++ F+A LGL P AK VNP+
Sbjct: 302 -LERAGLTVADLDVIEANEAFAAQACAVTRELGLDP---AK---------------VNPN 342
Query: 202 GGLISKGHPLGATG 215
G IS GHP+GATG
Sbjct: 343 GSGISLGHPVGATG 356
>gnl|CDD|180563 PRK06445, PRK06445, acetyl-CoA acetyltransferase; Provisional.
Length = 394
Score = 55.5 bits (134), Expect = 3e-09
Identities = 46/166 (27%), Positives = 68/166 (40%), Gaps = 44/166 (26%)
Query: 59 TLEQIMNSPKIFGP---LTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMAT 115
+LE++ P F P +T P + GA+ +L S+ V++YG + A +I A
Sbjct: 226 SLEKLAKLPPAFKPDGVITAGNSSPLNSGASYVLLMSKKAVKKYGLKPMA-KIRSFGFA- 283
Query: 116 DTSSTFNSDSCIKLIGFD---MTKA---AADRLYEKTQIKPSDIDVIELHDCFSANELIT 169
G M K A+ + EK + DID+ E+++ F+ L
Sbjct: 284 ---------------GVPPAIMGKGPVPASKKALEKAGLSVKDIDLWEINEAFAVVVLYA 328
Query: 170 YEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
+ LGL P VN GG I+ GHPLGATG
Sbjct: 329 IKELGLDP------------------ETVNIKGGAIAIGHPLGATG 356
>gnl|CDD|181311 PRK08235, PRK08235, acetyl-CoA acetyltransferase; Provisional.
Length = 393
Score = 53.2 bits (128), Expect = 2e-08
Identities = 45/160 (28%), Positives = 71/160 (44%), Gaps = 32/160 (20%)
Query: 59 TLEQIMNSPKIF---GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMAT 115
T+E++ +F G +T +DGAAA VL SED ++ G + A I+
Sbjct: 225 TIEKLAKLKPVFDKTGTITAGNAPGVNDGAAALVLMSEDRAKQEGRKPLAT-ILAHTAIA 283
Query: 116 DTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGL 175
+ F + G+ A + L EKT DID+ E+++ F+A L + E G+
Sbjct: 284 VEAKDFP-----RTPGY-----AINALLEKTGKTVEDIDLFEINEAFAAVALASTEIAGI 333
Query: 176 CPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
P VN +GG ++ GHP+GA+G
Sbjct: 334 DP------------------EKVNVNGGAVALGHPIGASG 355
>gnl|CDD|145779 pfam02803, Thiolase_C, Thiolase, C-terminal domain. Thiolase is
reported to be structurally related to beta-ketoacyl
synthase (pfam00109), and also chalcone synthase.
Length = 123
Score = 48.8 bits (117), Expect = 1e-07
Identities = 24/78 (30%), Positives = 38/78 (48%), Gaps = 18/78 (23%)
Query: 138 AADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHV 197
A + +K + +DID+ E+++ F+A L + LG+ P
Sbjct: 27 AIPKALKKAGLTVNDIDLFEINEAFAAQALAVAKDLGIDP------------------EK 68
Query: 198 VNPSGGLISKGHPLGATG 215
VN +GG I+ GHPLGA+G
Sbjct: 69 VNVNGGAIALGHPLGASG 86
>gnl|CDD|180261 PRK05790, PRK05790, putative acyltransferase; Provisional.
Length = 393
Score = 50.9 bits (123), Expect = 1e-07
Identities = 38/139 (27%), Positives = 57/139 (41%), Gaps = 39/139 (28%)
Query: 82 SDGAAAAVLASEDFVRRYGFEANAVEI-----VGLEMATDTSSTFNSDSCIKLIGFDMTK 136
+DGAAA V+ SE + G A I G++ A + +
Sbjct: 251 NDGAAAVVVMSEAKAKELGLTPLA-RIVSYAVAGVDPAIMGIGPVPA-----------IR 298
Query: 137 AAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKH 196
A EK +D+D+IE+++ F+A L + LGL P
Sbjct: 299 KAL----EKAGWSLADLDLIEINEAFAAQALAVEKELGLDP------------------E 336
Query: 197 VVNPSGGLISKGHPLGATG 215
VN +GG I+ GHP+GA+G
Sbjct: 337 KVNVNGGAIALGHPIGASG 355
>gnl|CDD|181146 PRK07851, PRK07851, acetyl-CoA acetyltransferase; Provisional.
Length = 406
Score = 50.8 bits (122), Expect = 1e-07
Identities = 44/160 (27%), Positives = 67/160 (41%), Gaps = 32/160 (20%)
Query: 59 TLEQIMNSPKIFGP---LTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMAT 115
T E++ +F P +T CP +DGAAA V+ S+ R G + L
Sbjct: 237 TYEKVSQLKPVFRPDGTVTAGNACPLNDGAAAVVIMSDTKARELG-------LTPLARIV 289
Query: 116 DTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGL 175
T + S + L + +K A R + DID++E+++ F+A L + LG+
Sbjct: 290 STGVSGLSPEIMGLGPVEASKQALAR----AGMSIDDIDLVEINEAFAAQVLPSARELGI 345
Query: 176 CPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
K +N SGG I+ GHP G TG
Sbjct: 346 -DEDK-----------------LNVSGGAIALGHPFGMTG 367
>gnl|CDD|235675 PRK06025, PRK06025, acetyl-CoA acetyltransferase; Provisional.
Length = 417
Score = 47.1 bits (112), Expect = 2e-06
Identities = 37/134 (27%), Positives = 60/134 (44%), Gaps = 31/134 (23%)
Query: 83 DGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRL 142
DGAAA +LAS+ + ++G + A + M D + N+ AA ++
Sbjct: 276 DGAAALLLASKAYAEKHGLKPRARIVAMANMGDDPTLMLNAPV-----------PAAKKV 324
Query: 143 YEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFI-DSGANTYGGKHVVNPS 201
K + DID+ E+++ F+ A+ FI D + + VN +
Sbjct: 325 LAKAGLTKDDIDLWEINEAFAV---------------VAEKFIRDLDLD----RDKVNVN 365
Query: 202 GGLISKGHPLGATG 215
GG I+ GHP+GATG
Sbjct: 366 GGAIALGHPIGATG 379
>gnl|CDD|215347 PLN02644, PLN02644, acetyl-CoA C-acetyltransferase.
Length = 394
Score = 46.2 bits (110), Expect = 4e-06
Identities = 38/145 (26%), Positives = 55/145 (37%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T SDGAAA VL S + G + A I G A F + +
Sbjct: 240 GSVTAGNASSISDGAAALVLVSGEKALELGLQVIAK-IRGYADAAQAPELFTTAPAL--- 295
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
A + + ++ S +D E+++ FS L + LGL P
Sbjct: 296 -------AIPKALKHAGLEASQVDYYEINEAFSVVALANQKLLGLDP------------- 335
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
VN GG +S GHP+G +G
Sbjct: 336 -----EKVNVHGGAVSLGHPIGCSG 355
>gnl|CDD|131498 TIGR02445, fadA, fatty oxidation complex, beta subunit FadA. This
subunit of the FadBA complex has acetyl-CoA
C-acyltransferase (EC 2.3.1.16) activity, and is also
known as beta-ketothiolase and fatty oxidation complex,
beta subunit. This protein is almost always located
adjacent to FadB (TIGR02437). The FadBA complex is the
major complex active for beta-oxidation of fatty acids
in E. coli [Fatty acid and phospholipid metabolism,
Degradation].
Length = 385
Score = 45.3 bits (107), Expect = 9e-06
Identities = 46/163 (28%), Positives = 67/163 (41%), Gaps = 30/163 (18%)
Query: 57 EYTLEQIMNSPKIFGPLTKLQCCPTS----DGAAAAVLASEDFVRRYGFEANAVEIVGLE 112
E T+E + F P TS DGA+A ++ SE G + A I +
Sbjct: 211 ETTVESLAALRPAFDPKNGTVTAGTSSALSDGASAMLVMSEQRANELGLKPRAR-IRSMA 269
Query: 113 MATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEA 172
+A S ++G+ A L ++ + SDIDV EL++ F+A L +
Sbjct: 270 VAGCDPS---------IMGYGPVPATQKAL-KRAGLSISDIDVFELNEAFAAQALPCLKD 319
Query: 173 LGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
LGL K VN +GG I+ GHPLG +G
Sbjct: 320 LGLLDKMDEK---------------VNLNGGAIALGHPLGCSG 347
>gnl|CDD|181145 PRK07850, PRK07850, acetyl-CoA acetyltransferase; Provisional.
Length = 387
Score = 45.1 bits (107), Expect = 1e-05
Identities = 38/135 (28%), Positives = 57/135 (42%), Gaps = 31/135 (22%)
Query: 82 SDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADR 141
SDGAAA + ED R G A IV + ++ L D A +
Sbjct: 245 SDGAAAVLWMDEDRARALGLRPRA-RIV-------AQALVGAEPYYHL---DGPVQATAK 293
Query: 142 LYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGK-HVVNP 200
+ EK +K DID++E+++ F++ L S A + VN
Sbjct: 294 VLEKAGMKIGDIDLVEINEAFASVVL-------------------SWAQVHEPDMDKVNV 334
Query: 201 SGGLISKGHPLGATG 215
+GG I+ GHP+G+TG
Sbjct: 335 NGGAIALGHPVGSTG 349
>gnl|CDD|235741 PRK06205, PRK06205, acetyl-CoA acetyltransferase; Provisional.
Length = 404
Score = 45.0 bits (107), Expect = 1e-05
Identities = 34/133 (25%), Positives = 53/133 (39%), Gaps = 26/133 (19%)
Query: 83 DGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRL 142
D AAA ++ +ED G +V +A S IG A ++
Sbjct: 259 DAAAACLVTTEDKAEELGLRP-LARLVSWAVAGVEPSRMG-------IG---PVPATEKA 307
Query: 143 YEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSG 202
+ + DID+IEL++ F+A L + G + + +N +G
Sbjct: 308 LARAGLTLDDIDLIELNEAFAAQVLAVLKEWGFGADDEER---------------LNVNG 352
Query: 203 GLISKGHPLGATG 215
IS GHP+GATG
Sbjct: 353 SGISLGHPVGATG 365
>gnl|CDD|181242 PRK08131, PRK08131, acetyl-CoA acetyltransferase; Provisional.
Length = 401
Score = 44.4 bits (105), Expect = 2e-05
Identities = 41/159 (25%), Positives = 70/159 (44%), Gaps = 29/159 (18%)
Query: 59 TLEQIMNSPKIF--GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATD 116
T+E + +F G +T +DGAAA ++ S +YG + A + +
Sbjct: 231 TVEALTKLKPLFEGGVVTAGNASGINDGAAALLIGSRAAGEKYGLKPMARILSSAAAGVE 290
Query: 117 TSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLC 176
+++G +A L + + D+D+IE+++ F++ L + LG+
Sbjct: 291 P----------RIMGIGPVEAIKKAL-ARAGLTLDDMDIIEINEAFASQVLGCLKGLGV- 338
Query: 177 PVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
DF D VNP+GG I+ GHPLGA+G
Sbjct: 339 ------DFDDPR---------VNPNGGAIAVGHPLGASG 362
>gnl|CDD|236440 PRK09268, PRK09268, acetyl-CoA acetyltransferase; Provisional.
Length = 427
Score = 43.0 bits (102), Expect = 4e-05
Identities = 43/160 (26%), Positives = 63/160 (39%), Gaps = 56/160 (35%)
Query: 80 PTSDGAAAAVLASEDFVRRYGF---------EANAVEIV----GLEMATDTSSTFNSDSC 126
P +DGA+ +LASE++ +G E AV+ V GL MA +
Sbjct: 263 PLTDGASVVLLASEEWAAEHGLPVLAYLVDAETAAVDFVHGKEGLLMA----PAY----- 313
Query: 127 IKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEA----------LGL- 175
A RL + + D D E+H+ F++ L T +A LGL
Sbjct: 314 -----------AVPRLLARNGLTLQDFDFYEIHEAFASQVLATLKAWEDEEYCRERLGLD 362
Query: 176 CPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
P+G ID +N +G ++ GHP ATG
Sbjct: 363 APLGS----IDRSK--------LNVNGSSLAAGHPFAATG 390
>gnl|CDD|215161 PLN02287, PLN02287, 3-ketoacyl-CoA thiolase.
Length = 452
Score = 42.8 bits (101), Expect = 6e-05
Identities = 39/141 (27%), Positives = 59/141 (41%), Gaps = 41/141 (29%)
Query: 81 TSDGAAAAVLASEDFVRRYG------FEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDM 134
SDGA A +L + G F + A VG++ A + IG +
Sbjct: 290 VSDGAGAVLLMKRSVAMQKGLPILGVFRSFAA--VGVDPA------------VMGIGPAV 335
Query: 135 TKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGG 194
AA + ++ DID+ E+++ F++ + + LGL P K
Sbjct: 336 AIPAA---VKAAGLELDDIDLFEINEAFASQFVYCCKKLGLDP---EK------------ 377
Query: 195 KHVVNPSGGLISKGHPLGATG 215
VN +GG I+ GHPLGATG
Sbjct: 378 ---VNVNGGAIALGHPLGATG 395
>gnl|CDD|236204 PRK08257, PRK08257, acetyl-CoA acetyltransferase; Validated.
Length = 498
Score = 42.6 bits (101), Expect = 7e-05
Identities = 52/193 (26%), Positives = 69/193 (35%), Gaps = 36/193 (18%)
Query: 3 NIAGLDSSPITAQMFGNA-----GL---EHMKLYGTKPEHFAKIAYKNHLHSTNNPNSQF 54
GLD +F NA G EH G F+ +A KN P++
Sbjct: 158 LRHGLDRPVYVYPLFENALRAALGRSPEEHRAEMGELWAPFSAVAAKN-------PHAWI 210
Query: 55 QVEYTLEQI-MNSPK---IFGPLTKLQCC-PTSDGAAAAVLASEDFVRRYGF-EANAVEI 108
E + E+I +P I P TKL D AA +L S RR G E V +
Sbjct: 211 PRERSAEEIVTPTPDNRMIAWPYTKLMNANDMVDQGAAVLLTSVAKARRLGVPEDRWVYL 270
Query: 109 VGLEMATDTSS-----TFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCF- 162
G A D + I +AA R + DID +L+ CF
Sbjct: 271 HGGADAHDPYDILERPDLHRSPAI--------RAAGRRALALAGLGIDDIDAFDLYSCFP 322
Query: 163 SANELITYEALGL 175
SA ++ LGL
Sbjct: 323 SAVQVAA-RELGL 334
>gnl|CDD|181265 PRK08170, PRK08170, acetyl-CoA acetyltransferase; Provisional.
Length = 426
Score = 42.3 bits (100), Expect = 8e-05
Identities = 39/144 (27%), Positives = 61/144 (42%), Gaps = 32/144 (22%)
Query: 82 SDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADR 141
+DGA +LASE+ V++YG + A D S +G AA
Sbjct: 267 TDGACWLLLASEEAVKKYGLPPLGRIVDSQWAALDPS----------QMGLGPVHAAT-P 315
Query: 142 LYEKTQIKPSDIDVIELHDCFSANELITYEA----------LGLCPVGKAKDFIDSGANT 191
L ++ + D+D+ E+++ F+A L A LGL A +D
Sbjct: 316 LLQRHGLTLEDLDLWEINEAFAAQVLACLAAWADEEYCREQLGL---DGALGELD----- 367
Query: 192 YGGKHVVNPSGGLISKGHPLGATG 215
+ +N GG I+ GHP+GA+G
Sbjct: 368 ---RERLNVDGGAIALGHPVGASG 388
>gnl|CDD|181592 PRK08947, fadA, 3-ketoacyl-CoA thiolase; Reviewed.
Length = 387
Score = 41.5 bits (98), Expect = 1e-04
Identities = 41/134 (30%), Positives = 60/134 (44%), Gaps = 26/134 (19%)
Query: 82 SDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADR 141
SDGA+A ++ SE + G + A I + +A D I +G+ A
Sbjct: 242 SDGASAMLVMSESRAKELGLKPRAR-IRSMAVA-------GCDPSI--MGYGPVPATQKA 291
Query: 142 LYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPS 201
L ++ + SDIDV EL++ F+A L + LGL K VN +
Sbjct: 292 L-KRAGLSISDIDVFELNEAFAAQSLPCLKDLGLLDKMDEK---------------VNLN 335
Query: 202 GGLISKGHPLGATG 215
GG I+ GHPLG +G
Sbjct: 336 GGAIALGHPLGCSG 349
>gnl|CDD|180775 PRK06954, PRK06954, acetyl-CoA acetyltransferase; Provisional.
Length = 397
Score = 41.4 bits (97), Expect = 2e-04
Identities = 37/145 (25%), Positives = 59/145 (40%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T SDGAAA V+ +R G A +VG S F +
Sbjct: 244 GTVTAANSSSISDGAAALVMMRASTAKRLGLAPLAR-VVGHSTFAQAPSKFTTAPV---- 298
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
A +L+EK + +++D+ E+++ F+ + + GL P K
Sbjct: 299 ------GAIRKLFEKNGWRAAEVDLFEINEAFAVVTMAAMKEHGL-PHEK---------- 341
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
VN +GG + GHP+GA+G
Sbjct: 342 -------VNVNGGACALGHPIGASG 359
>gnl|CDD|102340 PRK06366, PRK06366, acetyl-CoA acetyltransferase; Provisional.
Length = 388
Score = 39.6 bits (92), Expect = 6e-04
Identities = 45/163 (27%), Positives = 66/163 (40%), Gaps = 38/163 (23%)
Query: 59 TLEQIMNSPKIF---GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMAT 115
T+E + P F G LT SDG +A V+ASE + YG + A I G E A+
Sbjct: 219 TMEDLAKLPPAFDKNGILTAGNSAQLSDGGSALVMASEKAINEYGLKPIA-RITGYESAS 277
Query: 116 DTSSTFNSDSCIKLIGFDMTKA---AADRLYEKTQIKPSDIDVIELHDCFSANELITYEA 172
L D +A A +L EK D++E ++ FS +I +
Sbjct: 278 -------------LDPLDFVEAPIPATRKLLEKQNKSIDYYDLVEHNEAFSIASIIVRDQ 324
Query: 173 LGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
L ID+ N +GG ++ GHP+G +G
Sbjct: 325 LK----------IDN--------ERFNVNGGAVAIGHPIGNSG 349
>gnl|CDD|168156 PRK05656, PRK05656, acetyl-CoA acetyltransferase; Provisional.
Length = 393
Score = 38.7 bits (90), Expect = 0.001
Identities = 38/136 (27%), Positives = 61/136 (44%), Gaps = 33/136 (24%)
Query: 82 SDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNS--DSCIKLIGFDMTKAAA 139
+DGAAA +L S A + +GL + ++ N+ D I IG +A
Sbjct: 251 NDGAAAVLLMS----------AAKAKALGLPVLAKIAAYANAGVDPAIMGIG---PVSAT 297
Query: 140 DRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVN 199
R +K +++D+IE ++ F+A L + LG D+ VN
Sbjct: 298 RRCLDKAGWSLAELDLIEANEAFAAQSLAVGKELGW----------DAAK--------VN 339
Query: 200 PSGGLISKGHPLGATG 215
+GG I+ GHP+GA+G
Sbjct: 340 VNGGAIALGHPIGASG 355
>gnl|CDD|131499 TIGR02446, FadI, fatty oxidation complex, beta subunit FadI. This
subunit of the FadJI complex has acetyl-CoA
C-acyltransferase (EC 2.3.1.16) activity, and is also
known as beta-ketothiolase and fatty oxidation complex,
beta subunit, and YfcY. This protein is almost always
located adjacent to FadJ (TIGR02440). The FadJI complex
is needed for anaerobic beta-oxidation of short-chain
fatty acids in E. coli [Fatty acid and phospholipid
metabolism, Degradation].
Length = 430
Score = 38.4 bits (89), Expect = 0.002
Identities = 38/164 (23%), Positives = 62/164 (37%), Gaps = 43/164 (26%)
Query: 68 KIFGPLTKLQCCPTSDGAAAAVLASED-----------FVRRYGFEANAVEIVGLEMATD 116
+ G +T P +DGAAA +L E ++R Y F A V
Sbjct: 256 RKHGSVTAANSTPLTDGAAAVILMREGRAKELGMEPLGYIRSYAFTAIDVW--------- 306
Query: 117 TSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLC 176
D L+G A ++ + SD+ +I++H+ F+A L +
Sbjct: 307 ------QD---MLMG---PSYATPLALQRAGLALSDLTLIDMHEAFAAQTLANVQMFASD 354
Query: 177 -----PVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHPLGATG 215
+G++K + + + N GG I+ GHP ATG
Sbjct: 355 KFAQENLGRSKAMGEIDMSKF------NVLGGSIAYGHPFAATG 392
>gnl|CDD|181597 PRK08963, fadI, 3-ketoacyl-CoA thiolase; Reviewed.
Length = 428
Score = 38.0 bits (89), Expect = 0.002
Identities = 41/167 (24%), Positives = 64/167 (38%), Gaps = 53/167 (31%)
Query: 70 FGPLTKLQCCPTSDGAAAAVLASED-----------FVRRYGFEANAVE---IVGLEMAT 115
G +T P +DGAAA +L SE ++R Y F A V ++G AT
Sbjct: 256 HGTVTAANSTPLTDGAAAVLLMSESRAKALGLTPLGYLRSYAFAAIDVWQDMLLGPAYAT 315
Query: 116 DTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGL 175
A +R + +D+ +I++H+ F+A L +
Sbjct: 316 PL--------------------ALER----AGLTLADLTLIDMHEAFAAQTLANLQMFA- 350
Query: 176 CPVGKAKDFIDS--GANTYGGKHVVNPS-----GGLISKGHPLGATG 215
++ F G + G+ V+ S GG I+ GHP ATG
Sbjct: 351 -----SERFAREKLGRSQAIGE--VDMSKFNVLGGSIAYGHPFAATG 390
>gnl|CDD|180659 PRK06690, PRK06690, acetyl-CoA acetyltransferase; Provisional.
Length = 361
Score = 37.4 bits (87), Expect = 0.004
Identities = 33/145 (22%), Positives = 57/145 (39%), Gaps = 29/145 (20%)
Query: 71 GPLTKLQCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLI 130
G +T C +DGA A ++ E R+ G++ + V I
Sbjct: 207 GTVTAGNSCGVNDGACAVLVMEEGQARKLGYKP-VLRFVR-SAVVGVDPNLPGTGPI--- 261
Query: 131 GFDMTKAAADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
A ++L + +K DID E+++ F++ + + L + P K
Sbjct: 262 ------FAVNKLLNEMNMKVEDIDYFEINEAFASKVVACAKELQI-PYEK---------- 304
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
+N +GG I+ GHP GA+G
Sbjct: 305 -------LNVNGGAIALGHPYGASG 322
>gnl|CDD|180843 PRK07108, PRK07108, acetyl-CoA acetyltransferase; Provisional.
Length = 392
Score = 36.7 bits (85), Expect = 0.006
Identities = 35/136 (25%), Positives = 57/136 (41%), Gaps = 33/136 (24%)
Query: 82 SDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIG--FDMTKAAA 139
SDGA+A V+ + R G + + G +A IG F A
Sbjct: 250 SDGASACVVMNAKVAEREGLQPLGI-FRGFAVAGCEPDEMG-------IGPVF-----AV 296
Query: 140 DRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVN 199
+L ++ +K DID+ EL++ F+ L + LG+ P+ + +N
Sbjct: 297 PKLLKQAGLKVDDIDLWELNEAFAVQVLYCRDTLGI-PMDR-----------------LN 338
Query: 200 PSGGLISKGHPLGATG 215
+GG I+ GHP G +G
Sbjct: 339 VNGGAIAVGHPYGVSG 354
>gnl|CDD|181072 PRK07661, PRK07661, acetyl-CoA acetyltransferase; Provisional.
Length = 391
Score = 36.3 bits (84), Expect = 0.008
Identities = 21/65 (32%), Positives = 29/65 (44%), Gaps = 18/65 (27%)
Query: 151 SDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPSGGLISKGHP 210
SDI + EL++ F++ + LGL VN +GG I+ GHP
Sbjct: 307 SDIGLFELNEAFASQSIQVIRELGLDE------------------EKVNVNGGAIALGHP 348
Query: 211 LGATG 215
LG TG
Sbjct: 349 LGCTG 353
>gnl|CDD|180595 PRK06504, PRK06504, acetyl-CoA acetyltransferase; Provisional.
Length = 390
Score = 34.3 bits (79), Expect = 0.037
Identities = 38/145 (26%), Positives = 63/145 (43%), Gaps = 44/145 (30%)
Query: 77 QCCPTSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFD--- 133
Q C DGA+ ++ +E ++ G + A I + + IG D
Sbjct: 246 QIC---DGASGVMVVNERGLKALGVKPLA-RIHHMTV----------------IGGDPVI 285
Query: 134 MTKA---AADRLYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGAN 190
M +A A +R +K +K DID+ E+++ F++ L +A G P +
Sbjct: 286 MLEAPLPATERALKKAGMKIDDIDLYEVNEAFASVPLAWLKATGADP---ER-------- 334
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
+N +GG I+ GHPLGA+G
Sbjct: 335 -------LNVNGGAIALGHPLGASG 352
>gnl|CDD|238426 cd00830, KAS_III, Ketoacyl-acyl carrier protein synthase III
(KASIII) initiates the elongation in type II fatty acid
synthase systems. It is found in bacteria and plants.
Elongation of fatty acids in the type II systems occurs
by Claisen condensation of malonyl-acyl carrier protein
(ACP) with acyl-ACP. KASIII initiates this process by
specifically using acetyl-CoA over acyl-CoA.
Length = 320
Score = 30.2 bits (69), Expect = 0.69
Identities = 9/24 (37%), Positives = 12/24 (50%)
Query: 133 DMTKAAADRLYEKTQIKPSDIDVI 156
D+ AA + E I DID+I
Sbjct: 52 DLAVEAAKKALEDAGIDADDIDLI 75
>gnl|CDD|116972 pfam08392, FAE1_CUT1_RppA, FAE1/Type III polyketide synthase-like
protein. The members of this family are described as
3-ketoacyl-CoA synthases, type III polyketide synthases,
fatty acid elongases and fatty acid condensing enzymes,
and are found in both prokaryotic and eukaryotic (mainly
plant) species. The region featured in this family
contains the active site residues, as well as motifs
involved in substrate binding.
Length = 290
Score = 29.4 bits (67), Expect = 1.1
Identities = 8/20 (40%), Positives = 13/20 (65%)
Query: 137 AAADRLYEKTQIKPSDIDVI 156
A D L+ KT ++P DI ++
Sbjct: 89 GAVDELFAKTGVRPRDIGIL 108
>gnl|CDD|234212 TIGR03443, alpha_am_amid, L-aminoadipate-semialdehyde dehydrogenase.
Members of this protein family are
L-aminoadipate-semialdehyde dehydrogenase (EC 1.2.1.31),
product of the LYS2 gene. It is also called
alpha-aminoadipate reductase. In fungi, lysine is
synthesized via aminoadipate. Currently, all members of
this family are fungal.
Length = 1389
Score = 29.6 bits (67), Expect = 1.6
Identities = 17/49 (34%), Positives = 23/49 (46%), Gaps = 3/49 (6%)
Query: 164 ANELITYEALGLCPVGKAK--DFIDSGANTYGGKHVVNPSGGLISKGHP 210
AN + T L LC GKAK F+ S + ++ VN S L+ G
Sbjct: 1084 ANVIGTINVLNLCAEGKAKQFSFVSSTS-ALDTEYYVNLSDELVQAGGA 1131
>gnl|CDD|216101 pfam00755, Carn_acyltransf, Choline/Carnitine o-acyltransferase.
Length = 590
Score = 29.2 bits (66), Expect = 1.7
Identities = 11/71 (15%), Positives = 20/71 (28%), Gaps = 17/71 (23%)
Query: 30 TKPEHFAKIAYKNH------LHSTNNPNSQFQVEYTLEQIMNSPKIFGPLTKLQCCPTSD 83
+K H + + L S + ++E L +I++
Sbjct: 163 SKNSHVV-VVCRGQFYKVDVLDSNGKLLTPDEIERQLAEILSDSS----------KSQPV 211
Query: 84 GAAAAVLASED 94
A L SE
Sbjct: 212 EAPIGALTSEP 222
>gnl|CDD|215459 PLN02854, PLN02854, 3-ketoacyl-CoA synthase.
Length = 521
Score = 29.2 bits (65), Expect = 2.0
Identities = 9/19 (47%), Positives = 13/19 (68%)
Query: 138 AADRLYEKTQIKPSDIDVI 156
A D L+ KT +KP DI ++
Sbjct: 195 ALDSLFSKTGVKPRDIGIL 213
>gnl|CDD|223381 COG0304, FabB, 3-oxoacyl-(acyl-carrier-protein) synthase [Lipid
metabolism / Secondary metabolites biosynthesis,
transport, and catabolism].
Length = 412
Score = 28.8 bits (65), Expect = 2.4
Identities = 33/145 (22%), Positives = 46/145 (31%), Gaps = 41/145 (28%)
Query: 82 SDGAAAAVLASEDFVRRYGFEANA-VEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAAD 140
+GA A VL + G A EIVG +D + +T A D
Sbjct: 231 GEGAGALVLEELEHALARG--AKIYAEIVGYGTTSD--------------AYHITAPAPD 274
Query: 141 ---------RLYEKTQIKPSDIDVIELHDC-FSANELITYEALGLCPVGKAKDFIDSGAN 190
+ P DID I H AN+ A+ + F + +
Sbjct: 275 GEGAIRAMRAALADAGLTPEDIDYINAHGTSTPANDKAESLAI-------KRVFGEHAKS 327
Query: 191 TYGGKHVVNPSGGLISKGHPLGATG 215
V+ + L GH LGA G
Sbjct: 328 LP-----VSSTKSLT--GHTLGAAG 345
>gnl|CDD|168632 PRK06633, PRK06633, acetyl-CoA acetyltransferase; Provisional.
Length = 392
Score = 28.5 bits (63), Expect = 2.6
Identities = 31/134 (23%), Positives = 57/134 (42%), Gaps = 29/134 (21%)
Query: 82 SDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADR 141
+DGAA ++ SE+ ++++ A IV A S + A+ +
Sbjct: 250 NDGAACLMVVSEEALKKHNLTPLA-RIVSYASAGVDPSIMGTAPV----------PASQK 298
Query: 142 LYEKTQIKPSDIDVIELHDCFSANELITYEALGLCPVGKAKDFIDSGANTYGGKHVVNPS 201
K +D++VIE+++ F+A + + K ++ VN +
Sbjct: 299 ALSKAGWSVNDLEVIEVNEAFAAQSIYVNREM--------KWDMEK----------VNIN 340
Query: 202 GGLISKGHPLGATG 215
GG I+ GHP+GA+G
Sbjct: 341 GGAIAIGHPIGASG 354
>gnl|CDD|107318 cd06323, PBP1_ribose_binding, Periplasmic sugar-binding domain of
the thermophilic Thermoanaerobacter tengcongensis ribose
binding protein (ttRBP) and its mesophilic homologs.
Periplasmic sugar-binding domain of the thermophilic
Thermoanaerobacter tengcongensis ribose binding protein
(ttRBP) and its mesophilic homologs. Members of this
group are belonging to the type I periplasmic binding
protein superfamily, whose members are involved in
chemotaxis, ATP-binding cassette transport, and
intercellular communication in central nervous system.
The thermophilic and mesophilic ribose-binding proteins
are structurally very similar, but differ substantially
in thermal stability.
Length = 268
Score = 28.4 bits (64), Expect = 2.6
Identities = 11/37 (29%), Positives = 18/37 (48%)
Query: 81 TSDGAAAAVLASEDFVRRYGFEANAVEIVGLEMATDT 117
SD A +A+E V+ G + VE+ G+ A+
Sbjct: 100 ASDNVAGGKMAAEYLVKLLGGKGKVVELQGIPGASAA 136
>gnl|CDD|238429 cd00833, PKS, polyketide synthases (PKSs) polymerize simple fatty
acids into a large variety of different products, called
polyketides, by successive decarboxylating Claisen
condensations. PKSs can be divided into 2 groups,
modular type I PKSs consisting of one or more large
multifunctional proteins and iterative type II PKSs,
complexes of several monofunctional subunits.
Length = 421
Score = 28.3 bits (64), Expect = 3.6
Identities = 12/46 (26%), Positives = 19/46 (41%), Gaps = 9/46 (19%)
Query: 114 ATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKPSDIDVIELH 159
T + + ++ LI R Y + + PSDID +E H
Sbjct: 269 RTKGITAPSGEAQAALIR---------RAYARAGVDPSDIDYVEAH 305
>gnl|CDD|237245 PRK12879, PRK12879, 3-oxoacyl-(acyl carrier protein) synthase III;
Reviewed.
Length = 325
Score = 27.9 bits (63), Expect = 3.7
Identities = 26/111 (23%), Positives = 37/111 (33%), Gaps = 37/111 (33%)
Query: 82 SDGAAAAVL-ASEDFVRRYGFEANAVEIVGLEMATDT-----------SSTFNSD----- 124
DGA A VL A+E N + + TD +T + D
Sbjct: 160 GDGAGAVVLEATE----------NEPGFIDYVLGTDGDGGDILYRTGLGTTMDRDALSGD 209
Query: 125 SCIKLIGFDMTK-------AAADRLYEKTQIKPSDIDVIELHDCFSANELI 168
I G ++ K A ++ EK + DID + H AN I
Sbjct: 210 GYIVQNGREVFKWAVRTMPKGARQVLEKAGLTKDDIDWVIPH---QANLRI 257
>gnl|CDD|193456 pfam12983, DUF3867, Protein of unknown function (DUF3867). This
family of proteins is functionally uncharacterized. This
family of proteins is found in bacteria. Proteins in
this family are approximately 190 amino acids in length.
Length = 186
Score = 27.4 bits (61), Expect = 4.4
Identities = 16/69 (23%), Positives = 30/69 (43%), Gaps = 14/69 (20%)
Query: 95 FVRRYGFEANAVE----IVGLEMATDTSSTFNSDSCIKLIGFDMTKAAADRLYEKTQIKP 150
F+ RYGF+ + +E +G++ + SS+ + ++ K + F EK + K
Sbjct: 67 FMERYGFDPSEIEKQLKNLGIDPSGLGSSSNDYENIRKTLSF----------QEKYKSKI 116
Query: 151 SDIDVIELH 159
VI
Sbjct: 117 KVKTVITYF 125
>gnl|CDD|144617 pfam01090, Ribosomal_S19e, Ribosomal protein S19e.
Length = 140
Score = 27.1 bits (61), Expect = 4.4
Identities = 9/27 (33%), Positives = 13/27 (48%), Gaps = 7/27 (25%)
Query: 18 GNAGLEHM-KLY------GTKPEHFAK 37
G G+ + K+Y G +P HF K
Sbjct: 65 GPVGVGRLRKIYGGRKRRGVRPSHFVK 91
>gnl|CDD|236475 PRK09352, PRK09352, 3-oxoacyl-(acyl carrier protein) synthase III;
Reviewed.
Length = 319
Score = 27.3 bits (62), Expect = 5.5
Identities = 10/24 (41%), Positives = 13/24 (54%)
Query: 133 DMTKAAADRLYEKTQIKPSDIDVI 156
D+ AA + E I P DID+I
Sbjct: 54 DLATEAAKKALEAAGIDPEDIDLI 77
>gnl|CDD|235872 PRK06840, PRK06840, hypothetical protein; Validated.
Length = 339
Score = 27.7 bits (62), Expect = 5.6
Identities = 9/24 (37%), Positives = 14/24 (58%)
Query: 133 DMTKAAADRLYEKTQIKPSDIDVI 156
DM AAA ++ + P+ IDV+
Sbjct: 55 DMAIAAAKPALKQAGVDPAAIDVV 78
>gnl|CDD|180045 PRK05377, PRK05377, fructose-1,6-bisphosphate aldolase; Reviewed.
Length = 296
Score = 27.1 bits (61), Expect = 6.6
Identities = 23/69 (33%), Positives = 30/69 (43%), Gaps = 15/69 (21%)
Query: 97 RRYGFEANAV----EIVGL--EMATD--TSSTFNSDSCIKLIGFDMT-------KAAADR 141
+ YG E +A E+ L EM T TS F D + I F+ T K AD
Sbjct: 32 KLYGVEEDAYSNEEEMFDLVHEMRTRIITSPAFTGDKILGAILFEQTMDREIEGKPTADY 91
Query: 142 LYEKTQIKP 150
L+EK + P
Sbjct: 92 LWEKKGVVP 100
>gnl|CDD|181133 PRK07819, PRK07819, 3-hydroxybutyryl-CoA dehydrogenase; Validated.
Length = 286
Score = 27.3 bits (61), Expect = 6.8
Identities = 9/16 (56%), Positives = 11/16 (68%)
Query: 129 LIGFDMTKAAADRLYE 144
L+G D KA AD +YE
Sbjct: 238 LVGLDTVKAIADSMYE 253
>gnl|CDD|219373 pfam07318, DUF1464, Protein of unknown function (DUF1464). This
family consists of several hypothetical archaeal
proteins of around 350 residues in length. The function
of this family is unknown.
Length = 336
Score = 27.0 bits (60), Expect = 7.8
Identities = 13/33 (39%), Positives = 18/33 (54%)
Query: 81 TSDGAAAAVLASEDFVRRYGFEANAVEIVGLEM 113
T+D A+AVLA D R G E V + +E+
Sbjct: 125 TADKVASAVLAIHDQSERLGVEYRTVNFILVEV 157
>gnl|CDD|130335 TIGR01268, Phe4hydrox_tetr, phenylalanine-4-hydroxylase, tetrameric
form. This model describes the larger, tetrameric form
of phenylalanine-4-hydroxylase, as found in metazoans.
The enzyme irreversibly converts phenylalanine to
tryosine and is known to be the rate-limiting step in
phenylalanine catabolism in some systems. It is closely
related to metazoan tyrosine 3-monooxygenase and
tryptophan 5-monoxygenase, and more distantly to
monomeric phenylalanine-4-hydroxylases of some
Gram-negative bacteria. The member of this family from
Drosophila has been described as having both
phenylalanine-4-hydroxylase and tryptophan
5-monoxygenase activity (PMID:1371286). However, a
Drosophila member of the tryptophan 5-monoxygenase clade
has subsequently been discovered.
Length = 436
Score = 27.1 bits (60), Expect = 8.1
Identities = 18/49 (36%), Positives = 25/49 (51%), Gaps = 5/49 (10%)
Query: 28 YGTKPEHFAKIAYKNHLHSTNNPNSQFQVEYTLEQIMNSPKIFGPLTKL 76
Y + + FA IA+ N+ H P +VEYT E+I +F LT L
Sbjct: 138 YRARRKQFADIAF-NYKHGQPIP----RVEYTDEEIATWRTVFNNLTVL 181
>gnl|CDD|237268 PRK13013, PRK13013, succinyl-diaminopimelate desuccinylase;
Reviewed.
Length = 427
Score = 26.6 bits (59), Expect = 9.8
Identities = 12/32 (37%), Positives = 19/32 (59%)
Query: 79 CPTSDGAAAAVLASEDFVRRYGFEANAVEIVG 110
C G AA+++A+E F+ Y A ++EI G
Sbjct: 122 CDMKGGLAASIIAAEAFLAVYPDFAGSIEISG 153
Database: CDD.v3.10
Posted date: Mar 20, 2013 7:55 AM
Number of letters in database: 10,937,602
Number of sequences in database: 44,354
Lambda K H
0.317 0.133 0.391
Gapped
Lambda K H
0.267 0.0686 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Sequences: 44354
Number of Hits to DB: 10,760,330
Number of extensions: 970527
Number of successful extensions: 1021
Number of sequences better than 10.0: 1
Number of HSP's gapped: 942
Number of HSP's successfully gapped: 95
Length of query: 216
Length of database: 10,937,602
Length adjustment: 93
Effective length of query: 123
Effective length of database: 6,812,680
Effective search space: 837959640
Effective search space used: 837959640
Neighboring words threshold: 11
Window for multiple hits: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.6 bits)
S2: 57 (25.8 bits)