BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13257
(188 letters)
Database: pdbaa
62,578 sequences; 14,973,337 total letters
Searching..................................................done
>pdb|3KF9|A Chain A, Crystal Structure Of The SdcenSKMLCK COMPLEX
pdb|3KF9|C Chain C, Crystal Structure Of The SdcenSKMLCK COMPLEX
Length = 149
Score = 188 bits (477), Expect = 2e-48, Method: Compositional matrix adjust.
Identities = 90/148 (60%), Positives = 114/148 (77%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
LT EQ +I+EAF LFD +G+G+I KELK+AMRALGFEP D SG +
Sbjct: 2 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMIADIDKDGSGTI 61
Query: 101 TYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQE 160
+++FL ++T KM ++DS+EEI+KAFRLFD+D TGKISF NL+ VA ELGEN+ DEE+QE
Sbjct: 62 DFEEFLQMMTAKMGERDSREEIMKAFRLFDDDETGKISFKNLKRVAKELGENMTDEELQE 121
Query: 161 MINEADKDGDGEINEEEFLHIMKKTSLY 188
MI+EAD+DGDGE+NEEEF IMKKTSL+
Sbjct: 122 MIDEADRDGDGEVNEEEFFRIMKKTSLF 149
>pdb|2GGM|A Chain A, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
pdb|2GGM|B Chain B, Human Centrin 2 Xeroderma Pigmentosum Group C Protein
Complex
Length = 172
Score = 179 bits (455), Expect = 6e-46, Method: Compositional matrix adjust.
Identities = 94/165 (56%), Positives = 119/165 (72%)
Query: 24 PNATAAPMKKPSGPKFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXX 83
N ++ +K PK ELT EQ +I+EAF LFD +GTG+I KELK+A RALGFEP
Sbjct: 8 ANMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAXRALGFEPKKE 67
Query: 84 XXXXXXXXXXXDNSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLR 143
+ +G + DFL + TQK ++KD+KEEILKAF+LFD+D TGKISF NL+
Sbjct: 68 EIKKXISEIDKEGTGKXNFGDFLTVXTQKXSEKDTKEEILKAFKLFDDDETGKISFKNLK 127
Query: 144 SVAVELGENIADEEIQEMINEADKDGDGEINEEEFLHIMKKTSLY 188
VA ELGEN+ DEE+QE I+EAD+DGDGE++E+EFL I KKTSLY
Sbjct: 128 RVAKELGENLTDEELQEXIDEADRDGDGEVSEQEFLRIXKKTSLY 172
>pdb|2OBH|A Chain A, Centrin-Xpc Peptide
pdb|2OBH|B Chain B, Centrin-Xpc Peptide
Length = 143
Score = 179 bits (454), Expect = 8e-46, Method: Compositional matrix adjust.
Identities = 87/143 (60%), Positives = 111/143 (77%)
Query: 42 TPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLT 101
T EQ +I+EAF LFD +GTG+I KELK+AMRALGFEP + +G +
Sbjct: 1 TEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMN 60
Query: 102 YKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEM 161
+ DFL ++TQKM++KD+KEEILKAF+LFD+D TGKISF NL+ VA ELGEN+ DEE+QEM
Sbjct: 61 FGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEM 120
Query: 162 INEADKDGDGEINEEEFLHIMKK 184
I+EAD+DGDGE++E+EFL IMKK
Sbjct: 121 IDEADRDGDGEVSEQEFLRIMKK 143
>pdb|3QRX|A Chain A, Chlamydomonas Reinhardtii Centrin Bound To Melittin
Length = 169
Score = 171 bits (434), Expect = 2e-43, Method: Compositional matrix adjust.
Identities = 83/148 (56%), Positives = 111/148 (75%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
LT EQ +I+EAF LFD +G+G+I KELK+AMRALGFEP D SG +
Sbjct: 22 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 81
Query: 101 TYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQE 160
+++FL ++T KM ++DS+EEILKAFRLFD+DN+G I+ +LR VA ELGEN+ +EE+QE
Sbjct: 82 DFEEFLTMMTAKMGERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQE 141
Query: 161 MINEADKDGDGEINEEEFLHIMKKTSLY 188
MI EAD++ D EI+E+EF+ IMKKTSL+
Sbjct: 142 MIAEADRNDDNEIDEDEFIRIMKKTSLF 169
>pdb|3U0K|A Chain A, Crystal Structure Of The Genetically Encoded Calcium
Indicator Rcamp
Length = 440
Score = 143 bits (360), Expect = 7e-35, Method: Compositional matrix adjust.
Identities = 75/162 (46%), Positives = 102/162 (62%), Gaps = 3/162 (1%)
Query: 24 PNATAAPMKKPSG---PKFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEP 80
P+ A KK G + +LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P
Sbjct: 276 PSNGAVMQKKTKGWEPTRDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNP 335
Query: 81 XXXXXXXXXXXXXXDNSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFA 140
D G + + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A
Sbjct: 336 TEAELQDMINEVDADGDGTIDFPEFLIMMARKMKDTDSEEEIREAFRVFDKDGNGYISAA 395
Query: 141 NLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLHIM 182
LR V LGE + DEE+ EMI EAD DGDG++N EEF+ +M
Sbjct: 396 ELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQMM 437
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DGDG I+ EFL
Sbjct: 303 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLI 362
Query: 181 IMKK 184
+M +
Sbjct: 363 MMAR 366
>pdb|3SG6|A Chain A, Crystal Structure Of Dimeric Gcamp2-Lia(Linker 1)
Length = 450
Score = 142 bits (357), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 305 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 364
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 365 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 424
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 425 EMIREADIDGDGQVNYEEFVQMM 447
Score = 57.0 bits (136), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+G I+ EFL
Sbjct: 313 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 372
Query: 181 IMKK 184
+M +
Sbjct: 373 MMAR 376
>pdb|3EVU|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2, (#1)
pdb|3EVV|A Chain A, Crystal Structure Of Calcium Bound Dimeric Gcamp2 (#2)
pdb|3EK4|A Chain A, Calcium-Saturated Gcamp2 Monomer
pdb|3EK7|A Chain A, Calcium-Saturated Gcamp2 Dimer
Length = 449
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 304 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 363
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 364 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 423
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 424 EMIREADIDGDGQVNYEEFVQMM 446
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+G I+ EFL
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 181 IMKK 184
+M +
Sbjct: 372 MMAR 375
>pdb|3EK8|A Chain A, Calcium-Saturated Gcamp2 T116vG87R MUTANT MONOMER
Length = 449
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 304 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 363
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 364 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 423
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 424 EMIREADIDGDGQVNYEEFVQMM 446
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+G I+ EFL
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 181 IMKK 184
+M +
Sbjct: 372 MMAR 375
>pdb|3EVR|A Chain A, Crystal Structure Of Calcium Bound Monomeric Gcamp2
Length = 411
Score = 141 bits (356), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 267 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 326
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 327 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 386
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 387 EMIREADIDGDGQVNYEEFVQMM 409
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+G I+ EFL
Sbjct: 275 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 334
Query: 181 IMKK 184
+M +
Sbjct: 335 MMAR 338
>pdb|3SG7|A Chain A, Crystal Structure Of Gcamp3-Kf(Linker 1)
Length = 448
Score = 141 bits (355), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 95/143 (66%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D G
Sbjct: 303 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGT 362
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 363 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 422
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 423 EMIREADIDGDGQVNYEEFVQMM 445
Score = 58.5 bits (140), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 30/64 (46%), Positives = 41/64 (64%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DGDG I+ EFL
Sbjct: 311 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 370
Query: 181 IMKK 184
+M +
Sbjct: 371 MMAR 374
>pdb|3O77|A Chain A, The Structure Of Ca2+ Sensor (Case-16)
Length = 415
Score = 141 bits (355), Expect = 2e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 270 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 329
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 330 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 389
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 390 EMIREADIDGDGQVNYEEFVQMM 412
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+G I+ EFL
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 337
Query: 181 IMKK 184
+M +
Sbjct: 338 MMAR 341
>pdb|3O78|A Chain A, The Structure Of Ca2+ Sensor (Case-12)
pdb|3O78|B Chain B, The Structure Of Ca2+ Sensor (Case-12)
Length = 415
Score = 141 bits (355), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 270 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 329
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 330 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 389
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 390 EMIREADIDGDGQVNYEEFVQMM 412
Score = 56.2 bits (134), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+G I+ EFL
Sbjct: 278 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 337
Query: 181 IMKK 184
+M +
Sbjct: 338 MMAR 341
>pdb|2F2O|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2O|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|A Chain A, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
pdb|2F2P|B Chain B, Structure Of Calmodulin Bound To A Calcineurin Peptide: A
New Way Of Making An Old Binding Mode
Length = 179
Score = 140 bits (354), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 123
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 124 EMIREADIDGDGQVNYEEFVQMM 146
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 113 MADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDG 169
MAD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 170 DGEINEEEFLHIMKK 184
+G I+ EFL +M +
Sbjct: 61 NGTIDFPEFLTMMAR 75
>pdb|4DJC|A Chain A, 1.35 A Crystal Structure Of The Nav1.5 Diii-Iv-CaCAM
COMPLEX
Length = 152
Score = 140 bits (354), Expect = 3e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 7 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 66
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 67 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 126
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 127 EMIREADIDGDGQVNYEEFVQMM 149
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 113 MADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDG 169
MAD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG
Sbjct: 4 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 63
Query: 170 DGEINEEEFLHIMKK 184
+G I+ EFL +M +
Sbjct: 64 NGTIDFPEFLTMMAR 78
>pdb|1QTX|A Chain A, The 1.65 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 140 bits (354), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 97/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 3 QLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL+L+ +KM D DS+EE+ +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 63 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 122
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 123 EMIREADVDGDGQVNYEEFVQVM 145
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+G I+ EFL+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 181 IMKK 184
+M +
Sbjct: 71 LMAR 74
>pdb|2WEL|D Chain D, Crystal Structure Of Su6656-Bound CalciumCALMODULIN-
Dependent Protein Kinase Ii Delta In Complex With
Calmodulin
Length = 150
Score = 140 bits (354), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 5 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 64
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 65 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 124
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 125 EMIREADIDGDGQVNYEEFVQMM 147
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 113 MADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDG 169
MAD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG
Sbjct: 2 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 61
Query: 170 DGEINEEEFLHIMKK 184
+G I+ EFL +M +
Sbjct: 62 NGTIDFPEFLTMMAR 76
>pdb|2YGG|B Chain B, Complex Of Cambr And Cam
Length = 150
Score = 140 bits (353), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 123
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 124 EMIREADIDGDGQVNYEEFVQMM 146
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 113 MADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDG 169
MAD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 170 DGEINEEEFLHIMKK 184
+G I+ EFL +M +
Sbjct: 61 NGTIDFPEFLTMMAR 75
>pdb|3EWT|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
pdb|3EWV|A Chain A, Crystal Structure Of Calmodulin Complexed With A Peptide
Length = 154
Score = 140 bits (353), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 9 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 68
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 69 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 128
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 129 EMIREADIDGDGQVNYEEFVQMM 151
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 114 ADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
AD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+
Sbjct: 7 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 66
Query: 171 GEINEEEFLHIMKK 184
G I+ EFL +M +
Sbjct: 67 GTIDFPEFLTMMAR 80
>pdb|1CM1|A Chain A, Motions Of Calmodulin-Single-Conformer Refinement
pdb|1CM4|A Chain A, Motions Of Calmodulin-four-conformer Refinement
pdb|1CKK|A Chain A, CalmodulinRAT CA2+CALMODULIN DEPENDENT PROTEIN KINASE
Fragment
pdb|1CFF|A Chain A, Nmr Solution Structure Of A Complex Of Calmodulin With A
Binding Peptide Of The Ca2+-Pump
pdb|1QIV|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd), 1:2
Complex
pdb|1QIW|A Chain A, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1QIW|B Chain B, Calmodulin Complexed With
N-(3,3,-Diphenylpropyl)-N'-[1-R-(
3,4-Bis-Butoxyphenyl)-Ethyl]-Propylenediamine (Dpd)
pdb|1G4Y|R Chain R, 1.60 A Crystal Structure Of The Gating Domain From Small
Conductance Potassium Channel Complexed With
Calcium-Calmodulin
pdb|1K90|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1K90|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
3' Deoxy-Atp
pdb|1IWQ|A Chain A, Crystal Structure Of Marcks Calmodulin Binding Domain
Peptide Complexed With Ca2+CALMODULIN
pdb|1NWD|A Chain A, Solution Structure Of Ca2+CALMODULIN BOUND TO THE C-
Terminal Domain Of Petunia Glutamate Decarboxylase
pdb|1L7Z|A Chain A, Crystal Structure Of Ca2+/calmodulin Complexed With
Myristoylated Cap-23/nap-22 Peptide
pdb|1S26|D Chain D, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|E Chain E, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1S26|F Chain F, Structure Of Anthrax Edema Factor-calmodulin-alpha,beta-
Methyleneadenosine 5'-triphosphate Complex Reveals An
Alternative Mode Of Atp Binding To The Catalytic Site
pdb|1SK6|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1SK6|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin,
3',5' Cyclic Amp (Camp), And Pyrophosphate
pdb|1QX5|D Chain D, Crystal Structure Of Apocalmodulin
pdb|1QX5|I Chain I, Crystal Structure Of Apocalmodulin
pdb|1QX5|B Chain B, Crystal Structure Of Apocalmodulin
pdb|1QX5|J Chain J, Crystal Structure Of Apocalmodulin
pdb|1QX5|K Chain K, Crystal Structure Of Apocalmodulin
pdb|1QX5|T Chain T, Crystal Structure Of Apocalmodulin
pdb|1QX5|R Chain R, Crystal Structure Of Apocalmodulin
pdb|1QX5|Y Chain Y, Crystal Structure Of Apocalmodulin
pdb|1XA5|A Chain A, Structure Of Calmodulin In Complex With Kar-2, A Bis-Indol
Alkaloid
pdb|1SY9|A Chain A, Structure Of Calmodulin Complexed With A Fragment Of The
Olfactory Cng Channel
pdb|2F3Y|A Chain A, CalmodulinIQ DOMAIN COMPLEX
pdb|2F3Z|A Chain A, CalmodulinIQ-Aa Domain Complex
pdb|1X02|A Chain A, Solution Structure Of Stereo Array Isotope Labeled (Sail)
Calmodulin
pdb|2DFS|B Chain B, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|C Chain C, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|D Chain D, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|E Chain E, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|F Chain F, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|G Chain G, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|N Chain N, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|O Chain O, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|P Chain P, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|Q Chain Q, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|R Chain R, 3-D Structure Of Myosin-V Inhibited State
pdb|2DFS|S Chain S, 3-D Structure Of Myosin-V Inhibited State
pdb|1YR5|A Chain A, 1.7-A Structure Of Calmodulin Bound To A Peptide From Dap
Kinase
pdb|2FOT|A Chain A, Crystal Structure Of The Complex Between Calmodulin And
Alphaii-Spectrin
pdb|2BCX|A Chain A, Crystal Structure Of Calmodulin In Complex With A
Ryanodine Receptor Peptide
pdb|1A29|A Chain A, Calmodulin Complexed With Trifluoperazine (1:2 Complex)
pdb|1CFC|A Chain A, Calcium-Free Calmodulin
pdb|1CFD|A Chain A, Calcium-Free Calmodulin
pdb|1CLL|A Chain A, Calmodulin Structure Refined At 1.7 Angstroms Resolution
pdb|1CTR|A Chain A, Drug Binding By Calmodulin: Crystal Structure Of A
Calmodulin-Trifluoperazine Complex
pdb|1LIN|A Chain A, Calmodulin Complexed With Trifluoperazine (1:4 Complex)
pdb|1MUX|A Chain A, Solution Nmr Structure Of CalmodulinW-7 Complex: The Basis
Of Diversity In Molecular Recognition, 30 Structures
pdb|2HQW|A Chain A, Crystal Structure Of Ca2+CALMODULIN BOUND TO NMDA RECEPTOR
NR1C1 Peptide
pdb|2O5G|A Chain A, Calmodulin-Smooth Muscle Light Chain Kinase Peptide
Complex
pdb|2O60|A Chain A, Calmodulin Bound To Peptide From Neuronal Nitric Oxide
Synthase
pdb|3BXK|A Chain A, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXK|C Chain C, Crystal Structure Of The PQ-Type Calcium Channel (Cav2.1)
Iq Domain And Ca2+calmodulin Complex
pdb|3BXL|A Chain A, Crystal Structure Of The R-Type Calcium Channel (Cav2.3)
Iq Domain And Ca2+calmodulin Complex
pdb|2K0E|A Chain A, A Coupled Equilibrium Shift Mechanism In Calmodulin-
Mediated Signal Transduction
pdb|2K0F|A Chain A, Calmodulin Complexed With Calmodulin-Binding Peptide From
Smooth Muscle Myosin Light Chain Kinase
pdb|3DVE|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain Complex
pdb|3DVJ|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.2 Iq Domain (Without
Cloning Artifact, Hm To Tv) Complex
pdb|3DVK|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.3 Iq Domain Complex
pdb|3DVM|A Chain A, Crystal Structure Of Ca2+CAM-Cav2.1 Iq Domain Complex
pdb|2JZI|A Chain A, Structure Of Calmodulin Complexed With The Calmodulin
Binding Domain Of Calcineurin
pdb|3BYA|A Chain A, Structure Of A Calmodulin Complex
pdb|3G43|A Chain A, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|B Chain B, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|C Chain C, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|3G43|D Chain D, Crystal Structure Of The Calmodulin-Bound Cav1.2
C-Terminal Regulatory Domain Dimer
pdb|2KNE|A Chain A, Calmodulin Wraps Around Its Binding Domain In The Plasma
Membrane Ca2+ Pump Anchored By A Novel 18-1 Motif
pdb|2KDU|A Chain A, Structural Basis Of The Munc13-1CA2+-Calmodulin
Interaction: A Novel 1-26 Calmodulin Binding Motif With
A Bipartite Binding Mode
pdb|2X0G|B Chain B, X-ray Structure Of A Dap-kinase Calmodulin Complex
pdb|3GOF|A Chain A, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3GOF|B Chain B, Calmodulin Bound To Peptide From Macrophage Nitric Oxide
Synthase
pdb|3IF7|A Chain A, Structure Of Calmodulin Complexed With Its First
Endogenous Inhibitor, Sphingosylphosphorylcholine
pdb|2L53|A Chain A, Solution Nmr Structure Of Apo-Calmodulin In Complex With
The Iq Motif Of Human Cardiac Sodium Channel Nav1.5
pdb|2L7L|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
Calmodulin Kinase I
pdb|2LL6|A Chain A, Solution Nmr Structure Of Cam Bound To Inos Cam Binding
Domain Peptide
pdb|2LL7|A Chain A, Solution Nmr Structure Of Cam Bound To The Enos Cam
Binding Domain Peptide
pdb|4EHQ|A Chain A, Crystal Structure Of Calmodulin Binding Domain Of Orai1 In
Complex With Ca2+CALMODULIN DISPLAYS A UNIQUE BINDING
MODE
Length = 148
Score = 140 bits (353), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 122
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 123 EMIREADIDGDGQVNYEEFVQMM 145
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 114 ADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
AD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 171 GEINEEEFLHIMKK 184
G I+ EFL +M +
Sbjct: 61 GTIDFPEFLTMMAR 74
>pdb|2BE6|A Chain A, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|B Chain B, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|2BE6|C Chain C, 2.0 A Crystal Structure Of The Cav1.2 Iq Domain-CaCAM
COMPLEX
pdb|1ZUZ|A Chain A, Calmodulin In Complex With A Mutant Peptide From Human
Drp-1 Kinase
Length = 150
Score = 140 bits (353), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 123
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 124 EMIREADIDGDGQVNYEEFVQMM 146
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 113 MADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDG 169
MAD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 170 DGEINEEEFLHIMKK 184
+G I+ EFL +M +
Sbjct: 61 NGTIDFPEFLTMMAR 75
>pdb|2VAY|A Chain A, Calmodulin Complexed With Cav1.1 Iq Peptide
pdb|2LGF|A Chain A, Solution Structure Of Ca2+CALMODULIN COMPLEXED WITH A
PEPTIDE Representing The Calmodulin-Binding Domain Of
L-Selectin
Length = 146
Score = 140 bits (353), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 121 EMIREADIDGDGQVNYEEFVQMM 143
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+G I+ EFL
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 181 IMKK 184
+M +
Sbjct: 69 MMAR 72
>pdb|1IQ5|A Chain A, CalmodulinNEMATODE CA2+CALMODULIN DEPENDENT KINASE KINASE
Fragment
pdb|1LVC|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|1LVC|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin And
2' Deoxy, 3' Anthraniloyl Atp
pdb|2BKI|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|2BKI|D Chain D, Myosin Vi Nucleotide-Free (Mdinsert2-Iq) Crystal Structure
pdb|1WRZ|A Chain A, Calmodulin Complexed With A Peptide From A Human
Death-Associated Protein Kinase
pdb|2V01|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Pb
pdb|2V02|A Chain A, Recombinant Vertebrate Calmodulin Complexed With Ba
pdb|2R28|A Chain A, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2R28|B Chain B, The Complex Structure Of Calmodulin Bound To A Calcineurin
Peptide
pdb|2W73|A Chain A, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|B Chain B, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|E Chain E, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|2W73|F Chain F, High-Resolution Structure Of The Complex Between
Calmodulin And A Peptide From Calcineurin A
pdb|3HR4|B Chain B, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|D Chain D, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|F Chain F, Human Inos Reductase And Calmodulin Complex
pdb|3HR4|H Chain H, Human Inos Reductase And Calmodulin Complex
pdb|3OXQ|A Chain A, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|B Chain B, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|C Chain C, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|3OXQ|D Chain D, Crystal Structure Of Ca2+CAM-Cav1.2 Pre-IqIQ DOMAIN
COMPLEX
pdb|2Y4V|A Chain A, Crystal Structure Of Human Calmodulin In Complex With A
Dap Kinase-1 Mutant (W305y) Peptide
pdb|3SJQ|A Chain A, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|3SJQ|B Chain B, Crystal Structure Of A Small Conductance Potassium Channel
Splice Variant Complexed With Calcium-Calmodulin
pdb|4DCK|B Chain B, Crystal Structure Of The C-Terminus Of Voltage-Gated
Sodium Channel In Complex With Fgf13 And Cam
pdb|3SUI|A Chain A, Crystal Structure Of Ca2+-Calmodulin In Complex With A
Trpv1 C- Terminal Peptide
pdb|4G27|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Phenylurea
pdb|4G28|R Chain R, Calcium-Calmodulin Complexed With The Calmodulin Binding
Domain From A Small Conductance Potassium Channel Splice
Variant And Ebio-1
Length = 149
Score = 140 bits (353), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 123
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 124 EMIREADIDGDGQVNYEEFVQMM 146
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 113 MADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDG 169
MAD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 170 DGEINEEEFLHIMKK 184
+G I+ EFL +M +
Sbjct: 61 NGTIDFPEFLTMMAR 75
>pdb|2IX7|A Chain A, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
pdb|2IX7|B Chain B, Structure Of Apo-Calmodulin Bound To Unconventional Myosin
V
Length = 145
Score = 140 bits (353), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 2 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 61
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 62 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 121
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 122 EMIREADIDGDGQVNYEEFVQMM 144
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+G I+ EFL
Sbjct: 10 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 69
Query: 181 IMKK 184
+M +
Sbjct: 70 MMAR 73
>pdb|4GOW|D Chain D, Crystal Structure Of Ca2+CAM:KV7.4 (KCNQ4) B HELIX COMPLEX
Length = 144
Score = 140 bits (353), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 1 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 60
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 61 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 120
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 121 EMIREADIDGDGQVNYEEFVQMM 143
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+G I+ EFL
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 181 IMKK 184
+M +
Sbjct: 69 MMAR 72
>pdb|1CDL|A Chain A, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|B Chain B, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|C Chain C, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1CDL|D Chain D, Target Enzyme Recognition By Calmodulin: 2.4 Angstroms
Structure Of A Calmodulin-Peptide Complex
pdb|1PK0|D Chain D, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|E Chain E, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|1PK0|F Chain F, Crystal Structure Of The Ef3-Cam Complexed With Pmeapp
pdb|3GP2|A Chain A, Calmodulin Bound To Peptide From Calmodulin Kinase Ii
(Camkii)
Length = 147
Score = 140 bits (353), Expect = 4e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 122
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 123 EMIREADIDGDGQVNYEEFVQMM 145
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 114 ADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
AD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 171 GEINEEEFLHIMKK 184
G I+ EFL +M +
Sbjct: 61 GTIDFPEFLTMMAR 74
>pdb|1PRW|A Chain A, Crystal Structure Of Bovine Brain Ca++ Calmodulin In A
Compact Form
Length = 149
Score = 140 bits (353), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVD 123
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 124 EMIREADIDGDGQVNYEEFVQMM 146
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 114 ADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
AD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 171 GEINEEEFLHIMKK 184
G I+ EFL +M +
Sbjct: 62 GTIDFPEFLTMMAR 75
>pdb|1UP5|A Chain A, Chicken Calmodulin
pdb|1UP5|B Chain B, Chicken Calmodulin
Length = 148
Score = 140 bits (353), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEXLTDEEVD 122
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 123 EMIREADIDGDGQVNYEEFVQMM 145
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 114 ADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
AD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 171 GEINEEEFLHIMKK 184
G I+ EFL +M +
Sbjct: 61 GTIDFPEFLTMMAR 74
>pdb|1QS7|A Chain A, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
pdb|1QS7|C Chain C, The 1.8 Angstrom Structure Of Calmodulin Rs20 Peptide
Complex
Length = 145
Score = 140 bits (352), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 96/142 (67%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G +
Sbjct: 1 LTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 101 TYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQE 160
+ +FL+L+ +KM D DS+EE+ +AFR+FD+D G IS A LR V LGE + DEE+ E
Sbjct: 61 DFPEFLNLMARKMKDTDSEEELKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVDE 120
Query: 161 MINEADKDGDGEINEEEFLHIM 182
MI EAD DGDG++N EEF+ +M
Sbjct: 121 MIREADVDGDGQVNYEEFVQVM 142
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+G I+ EFL+
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 67
Query: 181 IMKK 184
+M +
Sbjct: 68 LMAR 71
>pdb|2K0J|A Chain A, Solution Structure Of Cam Complexed To Drp1p
pdb|2K61|A Chain A, Solution Structure Of Cam Complexed To Dapk Peptide
Length = 148
Score = 140 bits (352), Expect = 5e-34, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 95/143 (66%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGT 62
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 122
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 123 EMIREADIDGDGQVNYEEFVQMM 145
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 114 ADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
AD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DGD
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 171 GEINEEEFLHIMKK 184
G I+ EFL +M +
Sbjct: 61 GTIDFPEFLTMMAR 74
>pdb|1CDM|A Chain A, Modulation Of Calmodulin Plasticity In Molecular
Recognition On The Basis Of X-Ray Structures
Length = 144
Score = 140 bits (352), Expect = 6e-34, Method: Compositional matrix adjust.
Identities = 70/142 (49%), Positives = 95/142 (66%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G +
Sbjct: 1 LTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTI 60
Query: 101 TYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQE 160
+ +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+ E
Sbjct: 61 DFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDE 120
Query: 161 MINEADKDGDGEINEEEFLHIM 182
MI EAD DGDG++N EEF+ +M
Sbjct: 121 MIREADIDGDGQVNYEEFVQMM 142
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+G I+ EFL
Sbjct: 8 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 67
Query: 181 IMKK 184
+M +
Sbjct: 68 MMAR 71
>pdb|1XFU|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFU|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) Truncation
Mutant, Ef-delta 64 In Complex With Calmodulin
pdb|1XFV|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFV|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3' Deoxy-Atp
pdb|1XFW|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFW|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And 3'5' Cyclic Amp (Camp)
pdb|1XFY|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFY|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin
pdb|1XFZ|O Chain O, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|P Chain P, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|R Chain R, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|S Chain S, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFZ|T Chain T, Crystal Structure Of Anthrax Edema Factor (ef) In Complex
With Calmodulin In The Presence Of 1 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 139 bits (351), Expect = 7e-34, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 123
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
+MI EAD DGDG++N EEF+ +M
Sbjct: 124 QMIREADIDGDGQVNYEEFVQMM 146
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 113 MADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDG 169
MAD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 170 DGEINEEEFLHIMKK 184
+G I+ EFL +M +
Sbjct: 61 NGTIDFPEFLTMMAR 75
>pdb|3EKH|A Chain A, Calcium-Saturated Gcamp2 T116vK378W MUTANT MONOMER
Length = 449
Score = 139 bits (351), Expect = 8e-34, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 95/143 (66%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 304 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 363
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ + M D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 364 IDFPEFLTMMARWMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 423
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 424 EMIREADIDGDGQVNYEEFVQMM 446
Score = 56.6 bits (135), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+G I+ EFL
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 181 IMKK 184
+M +
Sbjct: 372 MMAR 375
>pdb|1VRK|A Chain A, The 1.9 Angstrom Structure Of E84k-Calmodulin Rs20 Peptide
Complex
Length = 148
Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 97/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 3 QLTDEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL+L+ +KM D DS+E++ +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 63 IDFPEFLNLMARKMKDTDSEEKLKEAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 122
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 123 EMIREADVDGDGQVNYEEFVQVM 145
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+G I+ EFL+
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 181 IMKK 184
+M +
Sbjct: 71 LMAR 74
>pdb|2BKH|B Chain B, Myosin Vi Nucleotide-Free (Mdinsert2) Crystal Structure
pdb|2VAS|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta-Insert1) Post-Rigor State
pdb|3GN4|B Chain B, Myosin Lever Arm
pdb|3GN4|D Chain D, Myosin Lever Arm
pdb|3GN4|F Chain F, Myosin Lever Arm
pdb|3GN4|H Chain H, Myosin Lever Arm
pdb|3L9I|C Chain C, Myosin Vi Nucleotide-Free (Mdinsert2) L310g Mutant Crystal
Structure
pdb|2X51|B Chain B, M6 Delta Insert1
pdb|4ANJ|B Chain B, Myosin Vi (Mdinsert2-Gfp Fusion) Pre-Powerstroke State
(Mg.Adp.Alf4)
pdb|4DBP|C Chain C, Myosin Vi Nucleotide-free (mdinsert2) D179y Crystal
Structure
pdb|4DBQ|B Chain B, Myosin Vi D179y (md-insert2-cam, Delta-insert1) Post-rigor
State
Length = 149
Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 123
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 124 EMIREADIDGDGQVNYEEFVTMM 146
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 113 MADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDG 169
MAD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 170 DGEINEEEFLHIMKK 184
+G I+ EFL +M +
Sbjct: 61 NGTIDFPEFLTMMAR 75
>pdb|1OOJ|A Chain A, Structural Genomics Of Caenorhabditis Elegans : Calmodulin
Length = 149
Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 123
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 124 EMIREADIDGDGQVNYEEFVTMM 146
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 113 MADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDG 169
MAD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 170 DGEINEEEFLHIMKK 184
+G I+ EFL +M +
Sbjct: 61 NGTIDFPEFLTMMAR 75
>pdb|1CLM|A Chain A, Structure Of Paramecium Tetraurelia Calmodulin At 1.8
Angstroms Resolution
Length = 148
Score = 139 bits (349), Expect = 1e-33, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
ELT EQ+A+ +EAFALFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 3 ELTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL L+ +KM ++DS+EE+++AF++FD D G IS A LR V LGE + D+E+
Sbjct: 63 IDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVD 122
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG IN EEF+ +M
Sbjct: 123 EMIREADIDGDGHINYEEFVRMM 145
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+G I+ EFL
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLS 70
Query: 181 IMKK 184
+M +
Sbjct: 71 LMAR 74
>pdb|1DMO|A Chain A, Calmodulin, Nmr, 30 Structures
pdb|3CLN|A Chain A, Structure Of Calmodulin Refined At 2.2 Angstroms
Resolution
Length = 148
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 122
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EA+ DGDG++N EEF+ +M
Sbjct: 123 EMIREANIDGDGQVNYEEFVQMM 145
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 114 ADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
AD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 171 GEINEEEFLHIMKK 184
G I+ EFL +M +
Sbjct: 61 GTIDFPEFLTMMAR 74
>pdb|2BBM|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|2BBN|A Chain A, Solution Structure Of A Calmodulin-Target Peptide Complex
By Multidimensional Nmr
pdb|1MXE|A Chain A, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|1MXE|B Chain B, Structure Of The Complex Of Calmodulin With The Target
Sequence Of Camki
pdb|4CLN|A Chain A, Structure Of A Recombinant Calmodulin From Drosophila
Melanogaster Refined At 2.2-Angstroms Resolution
Length = 148
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 122
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 123 EMIREADIDGDGQVNYEEFVTMM 145
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 114 ADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
AD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 171 GEINEEEFLHIMKK 184
G I+ EFL +M +
Sbjct: 61 GTIDFPEFLTMMAR 74
>pdb|2LV6|A Chain A, The Complex Between Ca-calmodulin And Skeletal Muscle
Myosin Light Chain Kinase From Combination Of Nmr And
Aqueous And Contrast-matched Saxs Data
Length = 148
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 122
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 123 EMIREADIDGDGQVNYEEFVTMM 145
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 114 ADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
AD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 171 GEINEEEFLHIMKK 184
G I+ EFL +M +
Sbjct: 61 GTIDFPEFLTMMAR 74
>pdb|1K93|D Chain D, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|E Chain E, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
pdb|1K93|F Chain F, Crystal Structure Of The Adenylyl Cyclase Domain Of
Anthrax Edema Factor (Ef) In Complex With Calmodulin
Length = 144
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 94/141 (66%)
Query: 42 TPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLT 101
T EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G +
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 102 YKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEM 161
+ +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+ EM
Sbjct: 61 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 120
Query: 162 INEADKDGDGEINEEEFLHIM 182
I EAD DGDG++N EEF+ +M
Sbjct: 121 IREADIDGDGQVNYEEFVQMM 141
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+G I+ EFL
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 181 IMKK 184
+M +
Sbjct: 67 MMAR 70
>pdb|1Y0V|H Chain H, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|I Chain I, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|J Chain J, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|K Chain K, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|L Chain L, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
pdb|1Y0V|M Chain M, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin And Pyrophosphate
Length = 146
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/141 (48%), Positives = 94/141 (66%)
Query: 42 TPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLT 101
T EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G +
Sbjct: 3 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 62
Query: 102 YKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEM 161
+ +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+ EM
Sbjct: 63 FPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 122
Query: 162 INEADKDGDGEINEEEFLHIM 182
I EAD DGDG++N EEF+ +M
Sbjct: 123 IREADIDGDGQVNYEEFVQMM 143
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+G I+ EFL
Sbjct: 9 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 68
Query: 181 IMKK 184
+M +
Sbjct: 69 MMAR 72
>pdb|3SG2|A Chain A, Crystal Structure Of Gcamp2-T116v,D381y
Length = 449
Score = 138 bits (348), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 95/143 (66%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 304 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 363
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 364 IDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 423
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 424 EMIREADIDGDGQVNYEEFVQMM 446
Score = 57.8 bits (138), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 30/68 (44%), Positives = 42/68 (61%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+G I+ EFL
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 371
Query: 181 IMKKTSLY 188
+M + Y
Sbjct: 372 MMARKMKY 379
>pdb|3SG3|A Chain A, Crystal Structure Of Gcamp3-D380y
Length = 449
Score = 138 bits (347), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 94/143 (65%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D G
Sbjct: 304 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGT 363
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 364 IDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 423
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 424 EMIREADIDGDGQVNYEEFVQMM 446
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/68 (45%), Positives = 42/68 (61%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DGDG I+ EFL
Sbjct: 312 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGTIDFPEFLT 371
Query: 181 IMKKTSLY 188
+M + Y
Sbjct: 372 MMARKMKY 379
>pdb|3SG4|A Chain A, Crystal Structure Of Gcamp3-D380y, Lp(Linker 2)
Length = 448
Score = 137 bits (346), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 94/143 (65%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D G
Sbjct: 303 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGT 362
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 363 IDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 422
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 423 EMIREADIDGDGQVNYEEFVQMM 445
Score = 60.5 bits (145), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 107 HLVTQKMADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMIN 163
H + + D+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MIN
Sbjct: 294 HKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMIN 353
Query: 164 EADKDGDGEINEEEFLHIMKKTSLY 188
E D DGDG I+ EFL +M + Y
Sbjct: 354 EVDADGDGTIDFPEFLTMMARKMKY 378
>pdb|3SG5|A Chain A, Crystal Structure Of Dimeric Gcamp3-D380y, Qp(Linker 1),
Lp(Linker 2)
Length = 448
Score = 137 bits (346), Expect = 2e-33, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 94/143 (65%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D G
Sbjct: 303 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGT 362
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 363 IDFPEFLTMMARKMKYTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVD 422
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 423 EMIREADIDGDGQVNYEEFVQMM 445
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 34/85 (40%), Positives = 51/85 (60%), Gaps = 3/85 (3%)
Query: 107 HLVTQKMADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMIN 163
H + + D+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MIN
Sbjct: 294 HKLEYNLPDQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMIN 353
Query: 164 EADKDGDGEINEEEFLHIMKKTSLY 188
E D DGDG I+ EFL +M + Y
Sbjct: 354 EVDADGDGTIDFPEFLTMMARKMKY 378
>pdb|4AQR|A Chain A, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
pdb|4AQR|B Chain B, Crystal Structure Of A Calmodulin In Complex With The
Regulatory Domain Of A Plasma-Membrane Ca2+-Atpase
Length = 149
Score = 137 bits (346), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT +Q+++ +EAF+LFDK+G G I+TKEL MR+LG P D +G
Sbjct: 4 QLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL+L+ +KM D DS+EE+ +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 64 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVD 123
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG+IN EEF+ +M
Sbjct: 124 EMIREADVDGDGQINYEEFVKVM 146
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 113 MADK---DSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDG 169
MAD+ D E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG
Sbjct: 1 MADQLTDDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 170 DGEINEEEFLHIMKK 184
+G I+ EFL++M +
Sbjct: 61 NGTIDFPEFLNLMAR 75
>pdb|2VB6|B Chain B, Myosin Vi (Md-Insert2-Cam, Delta Insert1) Post-Rigor State
( Crystal Form 2)
Length = 149
Score = 137 bits (346), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 64 IDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 123
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI E+D DGDG++N EEF+ +M
Sbjct: 124 EMIRESDIDGDGQVNYEEFVTMM 146
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 49/75 (65%), Gaps = 3/75 (4%)
Query: 113 MADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDG 169
MAD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG
Sbjct: 1 MADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 170 DGEINEEEFLHIMKK 184
+G I+ EFL +M +
Sbjct: 61 NGTIDFPEFLTMMAR 75
>pdb|1EXR|A Chain A, The 1.0 Angstrom Crystal Structure Of Ca+2 Bound
Calmodulin
pdb|1N0Y|A Chain A, Crystal Structure Of Pb-Bound Calmodulin
pdb|1N0Y|B Chain B, Crystal Structure Of Pb-Bound Calmodulin
pdb|1OSA|A Chain A, Crystal Structure Of Recombinant Paramecium Tetraurelia
Calmodulin At 1.68 Angstroms Resolution
Length = 148
Score = 137 bits (346), Expect = 3e-33, Method: Compositional matrix adjust.
Identities = 69/143 (48%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAFALFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 3 QLTEEQIAEFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL L+ +KM ++DS+EE+++AF++FD D G IS A LR V LGE + D+E+
Sbjct: 63 IDFPEFLSLMARKMKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVD 122
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG IN EEF+ +M
Sbjct: 123 EMIREADIDGDGHINYEEFVRMM 145
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+G I+ EFL
Sbjct: 11 EFKEAFALFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLS 70
Query: 181 IMKK 184
+M +
Sbjct: 71 LMAR 74
>pdb|1RFJ|A Chain A, Crystal Structure Of Potato Calmodulin Pcm6
Length = 149
Score = 136 bits (343), Expect = 6e-33, Method: Compositional matrix adjust.
Identities = 68/143 (47%), Positives = 96/143 (67%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT +Q+++ +EAF+LFDK+G G I+TKEL MR+LG P D +G
Sbjct: 4 QLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL+L+ +KM D DS+EE+ +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 64 IDFPEFLNLMARKMKDTDSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVD 123
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG+IN +EF+ +M
Sbjct: 124 EMIREADVDGDGQINYDEFVKVM 146
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 3/75 (4%)
Query: 113 MADK---DSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDG 169
MAD+ D E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG
Sbjct: 1 MADQLTEDQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADG 60
Query: 170 DGEINEEEFLHIMKK 184
+G I+ EFL++M +
Sbjct: 61 NGTIDFPEFLNLMAR 75
>pdb|1M39|A Chain A, Solution Structure Of The C-Terminal Fragment (F86-I165)
Of The Human Centrin 2 In Calcium Saturated Form
Length = 89
Score = 135 bits (341), Expect = 1e-32, Method: Compositional matrix adjust.
Identities = 63/89 (70%), Positives = 80/89 (89%)
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + DFL ++TQKM++KD+KEEILKAF+LFD+D TGKISF NL+ VA ELGEN+ DEE+Q
Sbjct: 1 MNFGDFLTVMTQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQ 60
Query: 160 EMINEADKDGDGEINEEEFLHIMKKTSLY 188
EMI+EAD+DGDGE++E+EFL IMKKTSLY
Sbjct: 61 EMIDEADRDGDGEVSEQEFLRIMKKTSLY 89
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 48 DIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLH 107
+I +AF LFD + TG IS K LK + LG D G ++ ++FL
Sbjct: 22 EILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLR 81
Query: 108 LV 109
++
Sbjct: 82 IM 83
>pdb|1GGZ|A Chain A, Crystal Structure Of The Calmodulin-Like Protein (Hclp)
From Human Epithelial Cells
Length = 148
Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 65/143 (45%), Positives = 94/143 (65%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQV + +EAF+LFDK+G G I+T+EL MR+LG P D +G
Sbjct: 3 QLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGNGT 62
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM D D++EEI +AFR+FD+D G +S A LR V LGE ++DEE+
Sbjct: 63 VDFPEFLGMMARKMKDTDNEEEIREAFRVFDKDGNGFVSAAELRHVMTRLGEKLSDEEVD 122
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI AD DGDG++N EEF+ ++
Sbjct: 123 EMIRAADTDGDGQVNYEEFVRVL 145
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 27/74 (36%), Positives = 49/74 (66%), Gaps = 3/74 (4%)
Query: 114 ADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
AD+ ++E++ + AF LFD+D G I+ L +V LG+N + E+++M++E D+DG+
Sbjct: 1 ADQLTEEQVTEFKEAFSLFDKDGDGCITTRELGTVMRSLGQNPTEAELRDMMSEIDRDGN 60
Query: 171 GEINEEEFLHIMKK 184
G ++ EFL +M +
Sbjct: 61 GTVDFPEFLGMMAR 74
>pdb|1AHR|A Chain A, Calmodulin Mutant With A Two Residue Deletion In The
Central Helix
Length = 146
Score = 134 bits (337), Expect = 3e-32, Method: Compositional matrix adjust.
Identities = 70/143 (48%), Positives = 96/143 (67%), Gaps = 2/143 (1%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL ++ +KM KDS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 63 IDFPEFLTMMARKM--KDSEEEIREAFRVFDKDGNGFISAAELRHVMTNLGEKLTDEEVD 120
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EAD DGDG++N EEF+ +M
Sbjct: 121 EMIREADIDGDGQVNYEEFVTMM 143
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 114 ADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
AD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 171 GEINEEEFLHIMKK 184
G I+ EFL +M +
Sbjct: 61 GTIDFPEFLTMMAR 74
>pdb|3EKJ|A Chain A, Calcium-Free Gcamp2 (Calcium Binding Deficient Mutant)
Length = 449
Score = 134 bits (336), Expect = 4e-32, Method: Compositional matrix adjust.
Identities = 66/143 (46%), Positives = 92/143 (64%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G I+TK+L MR+LG P D +G
Sbjct: 304 QLTEEQIAEFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGT 363
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + FL ++ +KM D DS+EEI +AFR+F +D G IS A LR V LGE + DEE+
Sbjct: 364 IDFPQFLTMMARKMKDTDSEEEIREAFRVFGKDGNGYISAAQLRHVMTNLGEKLTDEEVD 423
Query: 160 EMINEADKDGDGEINEEEFLHIM 182
EMI EA DGDG++N E+F+ +M
Sbjct: 424 EMIREAGIDGDGQVNYEQFVQMM 446
Score = 53.5 bits (127), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 40/64 (62%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE DG+G I+ +FL
Sbjct: 312 EFKEAFSLFDKDGDGGITTKQLGTVMRSLGQNPTEAELQDMINEVGADGNGTIDFPQFLT 371
Query: 181 IMKK 184
+M +
Sbjct: 372 MMAR 375
>pdb|1DEG|A Chain A, The Linker Of Des-Glu84 Calmodulin Is Bent As Seen In The
Crystal Structure
Length = 142
Score = 131 bits (330), Expect = 2e-31, Method: Compositional matrix adjust.
Identities = 68/141 (48%), Positives = 93/141 (65%), Gaps = 1/141 (0%)
Query: 42 TPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLT 101
T EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G +
Sbjct: 1 TEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTID 60
Query: 102 YKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEM 161
+ +FL ++ +KM D DS EEI +AFR+FD+D G IS A LR V LGE + DEE+ EM
Sbjct: 61 FPEFLTMMARKMKDTDS-EEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEM 119
Query: 162 INEADKDGDGEINEEEFLHIM 182
I EA+ DGDG++N EEF+ +M
Sbjct: 120 IREANIDGDGQVNYEEFVQMM 140
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+G I+ EFL
Sbjct: 7 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 66
Query: 181 IMKK 184
+M +
Sbjct: 67 MMAR 70
>pdb|2LMT|A Chain A, Nmr Structure Of Androcam
pdb|2LMU|A Chain A, Androcam At High Calcium
pdb|2LMV|A Chain A, Androcam At High Calcium With Three Explicit Ca2+
Length = 148
Score = 127 bits (319), Expect = 3e-30, Method: Compositional matrix adjust.
Identities = 66/145 (45%), Positives = 93/145 (64%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
ELT EQ+A+ ++AF FDKEGTG I+T+EL MR LG P +N+G
Sbjct: 3 ELTEEQIAEFKDAFVQFDKEGTGKIATRELGTLMRTLGQNPTEAELQDLIAEAENNNNGQ 62
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
L + +F ++ ++M + D++EE+ +AF++FD D G IS A LR V + LGE + DEEI
Sbjct: 63 LNFTEFCGIMAKQMRETDTEEEMREAFKIFDRDGDGFISPAELRFVMINLGEKVTDEEID 122
Query: 160 EMINEADKDGDGEINEEEFLHIMKK 184
EMI EAD DGDG IN EEF+ ++ +
Sbjct: 123 EMIREADFDGDGMINYEEFVWMISQ 147
>pdb|1NIW|A Chain A, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|C Chain C, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|E Chain E, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1NIW|G Chain G, Crystal Structure Of Endothelial Nitric Oxide Synthase
Peptide Bound To Calmodulin
pdb|1QX7|I Chain I, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|R Chain R, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|A Chain A, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|B Chain B, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
pdb|1QX7|M Chain M, Crystal Structure Of Apocam Bound To The Gating Domain Of
Small Conductance Ca2+-Activated Potassium Channel
Length = 148
Score = 127 bits (319), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 67/141 (47%), Positives = 90/141 (63%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL R+LG P D +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGT 62
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL +K D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 63 IDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVD 122
Query: 160 EMINEADKDGDGEINEEEFLH 180
E I EAD DGDG++N EEF+
Sbjct: 123 EXIREADIDGDGQVNYEEFVQ 143
>pdb|1Y6W|A Chain A, Trapped Intermediate Of Calmodulin
Length = 148
Score = 126 bits (317), Expect = 6e-30, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 89/141 (63%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL R+LG P D +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGCNPTEAELQDXINEVDADGNGT 62
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL + D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 63 INFPEFLTXXARCXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVD 122
Query: 160 EMINEADKDGDGEINEEEFLH 180
E I EAD DGDG++N EEF+
Sbjct: 123 EXIREADIDGDGQVNYEEFVQ 143
>pdb|1XFX|O Chain O, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|P Chain P, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|Q Chain Q, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|R Chain R, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|S Chain S, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
pdb|1XFX|T Chain T, Crystal Structure Of Anthrax Edema Factor (Ef) In Complex
With Calmodulin In The Presence Of 10 Millimolar
Exogenously Added Calcium Chloride
Length = 149
Score = 126 bits (316), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 66/141 (46%), Positives = 90/141 (63%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL R+LG P D +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVXRSLGQNPTEAELQDXINEVDADGNGT 63
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ + +FL +K D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+
Sbjct: 64 IDFPEFLTXXARKXKDTDSEEEIREAFRVFDKDGNGYISAAELRHVXTNLGEKLTDEEVD 123
Query: 160 EMINEADKDGDGEINEEEFLH 180
+ I EAD DGDG++N EEF+
Sbjct: 124 QXIREADIDGDGQVNYEEFVQ 144
>pdb|2A4J|A Chain A, Solution Structure Of The C-Terminal Domain (T94-Y172) Of
The Human Centrin 2 In Complex With A 17 Residues
Peptide (P1-Xpc) From Xeroderma Pigmentosum Group C
Protein
pdb|2K2I|A Chain A, Nmr Solution Structure Of The C-Terminal Domain (T94-Y172)
Of The Human Centrin 2 In Complex With A Repeat Sequence
Of Human Sfi1 (R641-T660)
Length = 79
Score = 125 bits (314), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 59/78 (75%), Positives = 72/78 (92%)
Query: 110 TQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDG 169
TQKM++KD+KEEILKAF+LFD+D TGKISF NL+ VA ELGEN+ DEE+QEMI+EAD+DG
Sbjct: 1 TQKMSEKDTKEEILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDG 60
Query: 170 DGEINEEEFLHIMKKTSL 187
DGE++E+EFL IMKKTSL
Sbjct: 61 DGEVSEQEFLRIMKKTSL 78
Score = 30.4 bits (67), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 29/62 (46%)
Query: 48 DIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLH 107
+I +AF LFD + TG IS K LK + LG D G ++ ++FL
Sbjct: 12 EILKAFKLFDDDETGKISFKNLKRVAKELGENLTDEELQEMIDEADRDGDGEVSEQEFLR 71
Query: 108 LV 109
++
Sbjct: 72 IM 73
>pdb|3FWB|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|A Chain A, Sac3:sus1:cdc31 Complex
pdb|3FWC|E Chain E, Sac3:sus1:cdc31 Complex
pdb|3FWC|I Chain I, Sac3:sus1:cdc31 Complex
pdb|3FWC|M Chain M, Sac3:sus1:cdc31 Complex
Length = 161
Score = 125 bits (313), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 71/148 (47%), Positives = 92/148 (62%), Gaps = 1/148 (0%)
Query: 35 SGP-KFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXX 93
SGP EL EQ +I EAF+LFD G + ELK+AM+ALGFE
Sbjct: 10 SGPLNSELLEEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYD 69
Query: 94 XDNSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENI 153
+ L+ Y DF ++ +K+ +D +EI +AF+LFD+D+TGKIS NLR VA ELGE +
Sbjct: 70 SEGRHLMKYDDFYIVMGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETL 129
Query: 154 ADEEIQEMINEADKDGDGEINEEEFLHI 181
DEE++ MI E D DGDGEINE EF+ I
Sbjct: 130 TDEELRAMIEEFDLDGDGEINENEFIAI 157
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 37/73 (50%), Gaps = 9/73 (12%)
Query: 116 KDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINE 175
++ K+EI +AF LFD +N G + + L+ LG + EI ++I+E D +G
Sbjct: 19 EEQKQEIYEAFSLFDMNNDGFLDYHELKVAMKALGFELPKREILDLIDEYDSEG------ 72
Query: 176 EEFLHIMKKTSLY 188
H+MK Y
Sbjct: 73 ---RHLMKYDDFY 82
>pdb|2L1W|A Chain A, The Solution Structure Of Soybean Calmodulin Isoform 4
Complexed With The Vacuolar Calcium Atpase Bca1 Peptide
Length = 149
Score = 124 bits (311), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 60/142 (42%), Positives = 92/142 (64%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
L+ EQ+ D +EAF LFDK+G G I+ +EL +R+L P D +G +
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 101 TYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQE 160
+ +FL L+ +K+ D D++EE+ +AF++FD+D G IS + LR V + LGE + DEE+++
Sbjct: 64 EFDEFLSLMAKKVKDTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQ 123
Query: 161 MINEADKDGDGEINEEEFLHIM 182
MI EAD DGDG++N EEF+ +M
Sbjct: 124 MIKEADLDGDGQVNYEEFVKMM 145
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 114 ADKDSKEEIL---KAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
AD S+E+I+ +AF LFD+D G I+ L +V L +N +EE+Q+MI+E D DG+
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 171 GEINEEEFLHIMKK 184
G I +EFL +M K
Sbjct: 61 GTIEFDEFLSLMAK 74
>pdb|2GV5|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|D Chain D, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2GV5|E Chain E, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|A Chain A, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|B Chain B, Crystal Structure Of Sfi1pCDC31P COMPLEX
pdb|2DOQ|C Chain C, Crystal Structure Of Sfi1pCDC31P COMPLEX
Length = 161
Score = 117 bits (293), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 88/149 (59%), Gaps = 1/149 (0%)
Query: 35 SGP-KFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXX 93
SGP EL EQ +I EAF+LFD G + ELK+A +ALGFE
Sbjct: 10 SGPLNSELLEEQKQEIYEAFSLFDXNNDGFLDYHELKVAXKALGFELPKREILDLIDEYD 69
Query: 94 XDNSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENI 153
+ L Y DF + +K+ +D +EI +AF+LFD+D+TGKIS NLR VA ELGE +
Sbjct: 70 SEGRHLXKYDDFYIVXGEKILKRDPLDEIKRAFQLFDDDHTGKISIKNLRRVAKELGETL 129
Query: 154 ADEEIQEMINEADKDGDGEINEEEFLHIM 182
DEE++ I E D DGDGEINE EF+ I
Sbjct: 130 TDEELRAXIEEFDLDGDGEINENEFIAIC 158
>pdb|2LHI|A Chain A, Solution Structure Of Ca2+CNA1 PEPTIDE-Bound Ycam
Length = 176
Score = 110 bits (276), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 90/146 (61%), Gaps = 1/146 (0%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
LT EQ+A+ +EAFALFDK+ GSIS+ EL MR+LG P D + +
Sbjct: 5 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 64
Query: 101 TYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQE 160
+ +FL L+++++ DS++E+L+AF++FD++ G IS A L+ V +GE + D E+ +
Sbjct: 65 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDD 124
Query: 161 MINEADKDGDGEINEEEFLHIMKKTS 186
M+ E DG GEIN ++F ++ K S
Sbjct: 125 MLREV-SDGSGEINIQQFAALLSKGS 149
>pdb|4DS7|A Chain A, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|B Chain B, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|C Chain C, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
pdb|4DS7|D Chain D, Crystal Structure Of Yeast Calmodulin Bound To The
C-Terminal Fragment Of Spindle Pole Body Protein Spc110
Length = 147
Score = 110 bits (275), Expect = 5e-25, Method: Compositional matrix adjust.
Identities = 57/144 (39%), Positives = 89/144 (61%), Gaps = 1/144 (0%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
LT EQ+A+ +EAFALFDK+ +GSIS EL MR+LG P D + +
Sbjct: 5 LTEEQIAEFKEAFALFDKDNSGSISASELATVMRSLGLSPSEAEVADLMNEIDVDGNHAI 64
Query: 101 TYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQE 160
+ +FL L+++++ DS++E+L+AF++FD++ G IS A L+ V +GE + D E+ E
Sbjct: 65 EFSEFLALMSRQLKCNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDE 124
Query: 161 MINEADKDGDGEINEEEFLHIMKK 184
M+ E DG GEIN ++F ++ K
Sbjct: 125 MLREV-SDGSGEINIKQFAALLSK 147
>pdb|1LKJ|A Chain A, Nmr Structure Of Apo Calmodulin From Yeast Saccharomyces
Cerevisiae
Length = 146
Score = 109 bits (272), Expect = 9e-25, Method: Compositional matrix adjust.
Identities = 56/144 (38%), Positives = 89/144 (61%), Gaps = 1/144 (0%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
LT EQ+A+ +EAFALFDK+ GSIS+ EL MR+LG P D + +
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 101 TYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQE 160
+ +FL L+++++ DS++E+L+AF++FD++ G IS A L+ V +GE + D E+ +
Sbjct: 64 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAEVDD 123
Query: 161 MINEADKDGDGEINEEEFLHIMKK 184
M+ E DG GEIN ++F ++ K
Sbjct: 124 MLREV-SDGSGEINIQQFAALLSK 146
>pdb|1OQP|A Chain A, Structure Of The Ca2+C-Terminal Domain Of Caltractin In
Complex With The Cdc31p-Binding Domain From Kar1p
Length = 77
Score = 102 bits (254), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 48/75 (64%), Positives = 64/75 (85%)
Query: 114 ADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEI 173
++DS+EEILKAFRLFD+DN+G I+ +LR VA ELGEN+ +EE+QEMI EAD++ D EI
Sbjct: 3 GERDSREEILKAFRLFDDDNSGTITIKDLRRVAKELGENLTEEELQEMIAEADRNDDNEI 62
Query: 174 NEEEFLHIMKKTSLY 188
+E+EF+ IMKKTSL+
Sbjct: 63 DEDEFIRIMKKTSLF 77
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 12/29 (41%), Positives = 20/29 (68%)
Query: 49 IQEAFALFDKEGTGSISTKELKIAMRALG 77
I +AF LFD + +G+I+ K+L+ + LG
Sbjct: 11 ILKAFRLFDDDNSGTITIKDLRRVAKELG 39
>pdb|2LHH|A Chain A, Solution Structure Of Ca2+-Bound Ycam
Length = 128
Score = 93.2 bits (230), Expect = 7e-20, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 74/119 (62%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
LT EQ+A+ +EAFALFDK+ GSIS+ EL MR+LG P D + +
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 101 TYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+ +FL L+++++ DS++E+L+AF++FD++ G IS A L+ V +GE + D E++
Sbjct: 64 EFSEFLALMSRQLKSNDSEQELLEAFKVFDKNGDGLISAAELKHVLTSIGEKLTDAELE 122
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+DN G IS + L +V LG + ++ E+ +++NE D DG+ +I EFL
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 181 IMKK 184
+M +
Sbjct: 71 LMSR 74
>pdb|4TNC|A Chain A, Refined Structure Of Chicken Skeletal Muscle Troponin C In
The Two-Calcium State At 2-Angstroms Resolution
Length = 162
Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 90/158 (56%), Gaps = 3/158 (1%)
Query: 29 APMKKPSGPKFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXX 88
+ M + + + L+ E +A+ + AF +FD +G G ISTKEL MR LG P
Sbjct: 2 SAMDQQAEARAFLSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAI 61
Query: 89 XXXXXXDNSGLLTYKDFLHLVTQKM---ADKDSKEEILKAFRLFDEDNTGKISFANLRSV 145
D SG + +++FL ++ ++M A S+EE+ FR+FD++ G I L +
Sbjct: 62 IEEVDEDGSGTIDFEEFLVMMVRQMKEDAKGKSEEELADCFRIFDKNADGFIDIEELGEI 121
Query: 146 AVELGENIADEEIQEMINEADKDGDGEINEEEFLHIMK 183
GE++ +E+I++++ ++DK+ DG I+ +EFL +M+
Sbjct: 122 LRATGEHVTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|1YTZ|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Activated State
pdb|1YV0|C Chain C, Crystal Structure Of Skeletal Muscle Troponin In The Ca2+-
Free State
pdb|1NCX|A Chain A, Troponin C
pdb|1NCY|A Chain A, Troponin-C, Complex With Manganese
pdb|1NCZ|A Chain A, Troponin C
pdb|1TOP|A Chain A, Structure Of Chicken Skeletal Muscle Troponin-C At 1.78
Angstroms Resolution
Length = 162
Score = 90.5 bits (223), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 85/146 (58%), Gaps = 3/146 (2%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
L+ E +A+ + AF +FD +G G ISTKEL MR LG P D SG +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 101 TYKDFLHLVTQKM---ADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEE 157
+++FL ++ ++M A S+EE+ FR+FD++ G I L + GE++ +E+
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 158 IQEMINEADKDGDGEINEEEFLHIMK 183
I++++ ++DK+ DG I+ +EFL +M+
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|1A2X|A Chain A, Complex Of Troponin C With A 47 Residue (1-47) Fragment Of
Troponin I
Length = 159
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 3/146 (2%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
L+ E +A+ + AF +FD +G G IS KEL MR LG P D SG +
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 101 TYKDFLHLVTQKM---ADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEE 157
+++FL ++ ++M A S+EE+ + FR+FD + G I L + GE++ DEE
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAECFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 158 IQEMINEADKDGDGEINEEEFLHIMK 183
I+ ++ + DK+ DG I+ +EFL +M+
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMME 156
>pdb|2W49|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W49|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4U|0 Chain 0, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|3 Chain 3, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|6 Chain 6, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
pdb|2W4U|9 Chain 9, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Length Step
Length = 159
Score = 90.1 bits (222), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 85/146 (58%), Gaps = 3/146 (2%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
L+ E +A+ + AF +FD +G G ISTKEL MR LG P D SG +
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 70
Query: 101 TYKDFLHLVTQKM---ADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEE 157
+++FL ++ ++M A S+EE+ FR+FD++ G I L + GE++ +E+
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVTEED 130
Query: 158 IQEMINEADKDGDGEINEEEFLHIMK 183
I++++ ++DK+ DG I+ +EFL +M+
Sbjct: 131 IEDLMKDSDKNNDGRIDFDEFLKMME 156
>pdb|1TNW|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
pdb|1TNX|A Chain A, Nmr Solution Structure Of Calcium Saturated Skeletal
Muscle Troponin C
Length = 162
Score = 89.7 bits (221), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 85/146 (58%), Gaps = 3/146 (2%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
L+ E +A+ + AF +FD +G G ISTKEL MR LG P D SG +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 101 TYKDFLHLVTQKM---ADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEE 157
+++FL ++ ++M A S+EE+ FR+FD++ G I L + GE++ +E+
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEED 133
Query: 158 IQEMINEADKDGDGEINEEEFLHIMK 183
I++++ ++DK+ DG I+ +EFL +M+
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|5TNC|A Chain A, Refined Crystal Structure Of Troponin C From Turkey
Skeletal Muscle At 2.0 Angstroms Resolution
Length = 162
Score = 89.4 bits (220), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 85/146 (58%), Gaps = 3/146 (2%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
L+ E +A+ + AF +FD +G G ISTKEL MR LG P D SG +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 101 TYKDFLHLVTQKM---ADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEE 157
+++FL ++ ++M A S+EE+ FR+FD++ G I L + GE++ +E+
Sbjct: 74 DFEEFLVMMVRQMKEDAKGKSEEELEDCFRIFDKNADGFIDIEELGEILRATGEHVTEED 133
Query: 158 IQEMINEADKDGDGEINEEEFLHIMK 183
I++++ ++DK+ DG I+ +EFL +M+
Sbjct: 134 IEDLMKDSDKNNDGRIDFDEFLKMME 159
>pdb|1TCF|A Chain A, Crystal Structure Of Calcium-Saturated Rabbit Skeletal
Troponin C
pdb|1TN4|A Chain A, Four Calcium Tnc
pdb|2TN4|A Chain A, Four Calcium Tnc
Length = 159
Score = 89.0 bits (219), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 82/146 (56%), Gaps = 3/146 (2%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
L+ E +A+ + AF +FD +G G IS KEL MR LG P D SG +
Sbjct: 11 LSEEMIAEFKAAFDMFDADGGGDISVKELGTVMRMLGQTPTKEELDAIIEEVDEDGSGTI 70
Query: 101 TYKDFLHLVTQKM---ADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEE 157
+++FL ++ ++M A S+EE+ + FR+FD + G I L + GE++ DEE
Sbjct: 71 DFEEFLVMMVRQMKEDAKGKSEEELAELFRIFDRNADGYIDAEELAEIFRASGEHVTDEE 130
Query: 158 IQEMINEADKDGDGEINEEEFLHIMK 183
I+ ++ + DK+ DG I+ +EFL +M+
Sbjct: 131 IESLMKDGDKNNDGRIDFDEFLKMME 156
>pdb|2LAN|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 N-Domain With Rdc
pdb|2LAP|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain With Rdc
Length = 167
Score = 87.0 bits (214), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 50/167 (29%), Positives = 87/167 (52%), Gaps = 5/167 (2%)
Query: 23 IPNATAAPMKKPSGPKFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXX 82
+ N P++ S L PE++ +++EAF FDK+ G I+ ++L MR +G+ P
Sbjct: 1 MGNCVKYPLRNLSRKDRSLRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTE 60
Query: 83 XXXXXXXXXXXXDNSGLLTYKDFLHLVTQKM----ADKDSKEEILKAFRLFDEDNTGKIS 138
+ G + + DF+ L+ K+ AD +E+ AFR FD + G+IS
Sbjct: 61 MELIELSQQINMNLGGHVDFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEIS 120
Query: 139 FANLRSVAVE-LGENIADEEIQEMINEADKDGDGEINEEEFLHIMKK 184
+ LR + LG + +I+E+I + D +GDG ++ EEF+ +M +
Sbjct: 121 TSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEEFVRMMSR 167
>pdb|1YRU|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin And 1mm
Calcium Chloride
pdb|1YRT|B Chain B, Crystal Structure Analysis Of The Adenylyl Cyclaes
Catalytic Domain Of Adenylyl Cyclase Toxin Of Bordetella
Pertussis In Presence Of C-Terminal Calmodulin
Length = 74
Score = 85.5 bits (210), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/71 (59%), Positives = 52/71 (73%)
Query: 112 KMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDG 171
KM D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+ EMI EAD DGDG
Sbjct: 1 KMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDG 60
Query: 172 EINEEEFLHIM 182
++N EEF+ +M
Sbjct: 61 QVNYEEFVQMM 71
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 48 DIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLH 107
+I+EAF +FDK+G G IS EL+ M LG + D G + Y++F+
Sbjct: 10 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 69
Query: 108 LVTQK 112
++T K
Sbjct: 70 MMTAK 74
>pdb|1CMF|A Chain A, Nmr Solution Structure Of Apo Calmodulin Carboxy-Terminal
Domain
pdb|1CMG|A Chain A, Nmr Solution Structure Of Calcium-Loaded Calmodulin
Carboxy- Terminal Domain
Length = 73
Score = 83.6 bits (205), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 41/70 (58%), Positives = 51/70 (72%)
Query: 113 MADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGE 172
M D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+ EMI EAD DGDG+
Sbjct: 1 MKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 60
Query: 173 INEEEFLHIM 182
+N EEF+ +M
Sbjct: 61 VNYEEFVQMM 70
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 48 DIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLH 107
+I+EAF +FDK+G G IS EL+ M LG + D G + Y++F+
Sbjct: 9 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 68
Query: 108 LVTQK 112
++T K
Sbjct: 69 MMTAK 73
>pdb|1ZMZ|A Chain A, Solution Structure Of The N-Terminal Domain (M1-S98) Of
Human Centrin 2
Length = 98
Score = 82.0 bits (201), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 56/90 (62%)
Query: 25 NATAAPMKKPSGPKFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXX 84
N ++ +K PK ELT EQ +I+EAF LFD +GTG+I KELK+AMRALGFEP
Sbjct: 9 NMASSSQRKRMSPKPELTEEQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEE 68
Query: 85 XXXXXXXXXXDNSGLLTYKDFLHLVTQKMA 114
+ +G + + DFL ++TQKM+
Sbjct: 69 IKKMISEIDKEGTGKMNFGDFLTVMTQKMS 98
Score = 53.9 bits (128), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%)
Query: 117 DSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEE 176
+ K+EI +AF LFD D TG I L+ LG EEI++MI+E DK+G G++N
Sbjct: 28 EQKQEIREAFDLFDADGTGTIDVKELKVAMRALGFEPKKEEIKKMISEIDKEGTGKMNFG 87
Query: 177 EFLHIM 182
+FL +M
Sbjct: 88 DFLTVM 93
>pdb|1FW4|A Chain A, Crystal Structure Of E. Coli Fragment Tr2c From Calmodulin
To 1.7 A Resolution
pdb|2LQP|A Chain A, Nmr Solution Structure Of The Ca2+-Calmodulin C-Terminal
Domain In A Complex With A Peptide (Nscate) From The
L-Type Voltage-Gated Calcium Channel Alpha1c Subunit
Length = 71
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 50/68 (73%)
Query: 115 DKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEIN 174
D DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+ EMI EAD DGDG++N
Sbjct: 1 DTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 60
Query: 175 EEEFLHIM 182
EEF+ +M
Sbjct: 61 YEEFVQMM 68
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 48 DIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLH 107
+I+EAF +FDK+G G IS EL+ M LG + D G + Y++F+
Sbjct: 7 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 66
Query: 108 LVTQK 112
++T K
Sbjct: 67 MMTAK 71
>pdb|3OX6|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX6|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 81.6 bits (200), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 82/149 (55%), Gaps = 5/149 (3%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
L PE++ +++EAF FDK+ G I+ ++L MR +G+ P + G +
Sbjct: 5 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 64
Query: 101 TYKDFLHLVTQKM----ADKDSKEEILKAFRLFDEDNTGKISFANLR-SVAVELGENIAD 155
+ DF+ L+ K+ AD +E+ AFR FD + G+IS + LR ++ LG +
Sbjct: 65 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRALLGHQVGH 124
Query: 156 EEIQEMINEADKDGDGEINEEEFLHIMKK 184
+I+E+I + D +GDG ++ EEF+ +M +
Sbjct: 125 RDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|2RRT|A Chain A, Solution Structure Of Magnesium-Bound Form Of Calmodulin
C-Domain E104dE140D MUTANT
Length = 72
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 39/68 (57%), Positives = 51/68 (75%)
Query: 115 DKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEIN 174
D DS+EEI +AFR+FD+D G IS A+LR V LGE + DEE+ EMI EAD DGDG++N
Sbjct: 2 DTDSEEEIREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVN 61
Query: 175 EEEFLHIM 182
E+F+ +M
Sbjct: 62 YEDFVQMM 69
Score = 43.5 bits (101), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 22/64 (34%), Positives = 33/64 (51%)
Query: 49 IQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLHL 108
I+EAF +FDK+G G IS +L+ M LG + D G + Y+DF+ +
Sbjct: 9 IREAFRVFDKDGNGYISAADLRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEDFVQM 68
Query: 109 VTQK 112
+T K
Sbjct: 69 MTAK 72
>pdb|3OX5|A Chain A, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|B Chain B, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|C Chain C, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|D Chain D, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|E Chain E, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
pdb|3OX5|F Chain F, Crystal Structure Of The Calcium Sensor Calcium-Binding
Protein 1 (Cabp1)
Length = 153
Score = 81.3 bits (199), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 47/149 (31%), Positives = 81/149 (54%), Gaps = 5/149 (3%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
L PE++ +++EAF FDK+ G I+ ++L MR +G+ P + G +
Sbjct: 5 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 64
Query: 101 TYKDFLHLVTQKM----ADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVE-LGENIAD 155
+ DF+ L+ K+ AD +E+ AFR FD + G+IS + LR + LG +
Sbjct: 65 DFDDFVELMGPKLLAETADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGH 124
Query: 156 EEIQEMINEADKDGDGEINEEEFLHIMKK 184
+I+E+I + D +GDG ++ EEF+ +M +
Sbjct: 125 RDIEEIIRDVDLNGDGRVDFEEFVRMMSR 153
>pdb|1ZOT|B Chain B, Crystal Structure Analysis Of The CyaaC-Cam With Pmeapp
Length = 69
Score = 80.1 bits (196), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 49/66 (74%)
Query: 117 DSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEE 176
DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+ EMI EAD DGDG++N E
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 177 EFLHIM 182
EF+ +M
Sbjct: 62 EFVQMM 67
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 21/63 (33%), Positives = 33/63 (52%)
Query: 48 DIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLH 107
+I+EAF +FDK+G G IS EL+ M LG + D G + Y++F+
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 65
Query: 108 LVT 110
++T
Sbjct: 66 MMT 68
>pdb|2COL|B Chain B, Crystal Structure Analysis Of CyaaC-Cam With Pyrophosphate
Length = 67
Score = 80.1 bits (196), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 49/66 (74%)
Query: 117 DSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEE 176
DS+EEI +AFR+FD+D G IS A LR V LGE + DEE+ EMI EAD DGDG++N E
Sbjct: 2 DSEEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYE 61
Query: 177 EFLHIM 182
EF+ +M
Sbjct: 62 EFVQMM 67
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 20/62 (32%), Positives = 32/62 (51%)
Query: 48 DIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLH 107
+I+EAF +FDK+G G IS EL+ M LG + D G + Y++F+
Sbjct: 6 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 65
Query: 108 LV 109
++
Sbjct: 66 MM 67
>pdb|2KZ2|A Chain A, Calmodulin, C-Terminal Domain, F92e Mutant
Length = 94
Score = 79.7 bits (195), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 40/70 (57%), Positives = 50/70 (71%)
Query: 113 MADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGE 172
M D DS+EEI +AFR+ D+D G IS A LR V LGE + DEE+ EMI EAD DGDG+
Sbjct: 22 MKDTDSEEEIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQ 81
Query: 173 INEEEFLHIM 182
+N EEF+ +M
Sbjct: 82 VNYEEFVQMM 91
Score = 38.9 bits (89), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/65 (32%), Positives = 33/65 (50%)
Query: 48 DIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLH 107
+I+EAF + DK+G G IS EL+ M LG + D G + Y++F+
Sbjct: 30 EIREAFRVEDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 89
Query: 108 LVTQK 112
++T K
Sbjct: 90 MMTAK 94
>pdb|3IFK|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
pdb|3IFK|B Chain B, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-90
Length = 90
Score = 79.7 bits (195), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 39/88 (44%), Positives = 57/88 (64%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFR 127
+ + +FL ++ +KM D DS+EEI +AFR
Sbjct: 63 IDFPEFLTMMARKMKDTDSEEEIREAFR 90
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 114 ADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
AD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 171 GEINEEEFLHIMKK 184
G I+ EFL +M +
Sbjct: 61 GTIDFPEFLTMMAR 74
>pdb|1DTL|A Chain A, Crystal Structure Of Calcium-Saturated (3ca2+) Cardiac
Troponin C Complexed With The Calcium Sensitizer
Bepridil At 2.15 A Resolution
pdb|1J1D|A Chain A, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1D|D Chain D, Crystal Structure Of The 46kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|A Chain A, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
pdb|1J1E|D Chain D, Crystal Structure Of The 52kda Domain Of Human Cardiac
Troponin In The Ca2+ Saturated Form
Length = 161
Score = 79.0 bits (193), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 52/148 (35%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 40 ELTPEQVADIQEAFALFDKEG-TGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
+LT EQ + + AF +F GSISTKEL MR LG P D SG
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 99 LLTYKDFLHLVTQKMADKD---SKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIAD 155
+ + +FL ++ + M D S+EE+ FR+FD++ G I L+ + GE I +
Sbjct: 71 TVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITE 130
Query: 156 EEIQEMINEADKDGDGEINEEEFLHIMK 183
++I+E++ + DK+ DG I+ +EFL MK
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 135 GKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLHIMKKT 185
G IS L V LG+N EE+QEMI+E D+DG G ++ +EFL +M ++
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRS 84
>pdb|2RO9|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 C-Terminal Domain
Length = 69
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 39/66 (59%), Positives = 49/66 (74%)
Query: 117 DSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEE 176
DS+EE+ +AFR+FD+D G IS A LR V LGE + DEE+ EMI EAD DGDG+IN E
Sbjct: 1 DSEEELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYE 60
Query: 177 EFLHIM 182
EF+ +M
Sbjct: 61 EFVKVM 66
Score = 35.0 bits (79), Expect = 0.025, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 48 DIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLH 107
+++EAF +FDK+ G IS EL+ M LG + D G + Y++F+
Sbjct: 5 ELKEAFRVFDKDQNGFISAAELRHVMTNLGEKLTDEEVDEMIREADVDGDGQINYEEFVK 64
Query: 108 LVTQK 112
++ K
Sbjct: 65 VMMAK 69
>pdb|1AJ4|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 1
Structure
Length = 161
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 54/149 (36%), Positives = 80/149 (53%), Gaps = 6/149 (4%)
Query: 40 ELTPEQVADIQEAFALFDKEG-TGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
+LT EQ + + AF +F GSISTKEL MR LG P D SG
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 99 LLTYKDFLHLVTQKMADKDSK----EEILKAFRLFDEDNTGKISFANLRSVAVELGENIA 154
+ + +FL ++ + M D DSK EE+ FR+FD++ G I L+ + GE I
Sbjct: 71 TVDFDEFLVMMVRSMKD-DSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETIT 129
Query: 155 DEEIQEMINEADKDGDGEINEEEFLHIMK 183
+++I+E++ + DK+ DG I+ +EFL MK
Sbjct: 130 EDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 135 GKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLHIMKKT 185
G IS L V LG+N EE+QEMI+E D+DG G ++ +EFL +M ++
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRS 84
>pdb|2KXW|A Chain A, Structure Of The C-Domain Fragment Of Apo Calmodulin Bound
To The Iq Motif Of Nav1.2
Length = 73
Score = 78.6 bits (192), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 38/70 (54%), Positives = 51/70 (72%)
Query: 113 MADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGE 172
M ++DS+EE+++AF++FD D G IS A LR V LGE + D+E+ EMI EAD DGDG
Sbjct: 1 MKEQDSEEELIEAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGH 60
Query: 173 INEEEFLHIM 182
IN EEF+ +M
Sbjct: 61 INYEEFVRMM 70
Score = 37.4 bits (85), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 19/62 (30%), Positives = 30/62 (48%)
Query: 51 EAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLHLVT 110
EAF +FD++G G IS EL+ M LG + D G + Y++F+ ++
Sbjct: 12 EAFKVFDRDGNGLISAAELRHVMTNLGEKLTDDEVDEMIREADIDGDGHINYEEFVRMMV 71
Query: 111 QK 112
K
Sbjct: 72 SK 73
>pdb|2KN2|A Chain A, Solution Structure Of The C-Terminal Domain Of Soybean
Calmodulin Isoform 4 Fused With The Calmodulin-Binding
Domain Of Ntmkp1
Length = 92
Score = 77.8 bits (190), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 52/68 (76%)
Query: 115 DKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEIN 174
D D++EE+ +AF++FD+D G IS + LR V + LGE + DEE+++MI EAD DGDG++N
Sbjct: 4 DTDAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVN 63
Query: 175 EEEFLHIM 182
EEF+ +M
Sbjct: 64 YEEFVKMM 71
Score = 33.9 bits (76), Expect = 0.056, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 48 DIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLH 107
+++EAF +FDK+ G IS EL+ M LG + D G + Y++F+
Sbjct: 10 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 69
Query: 108 LV 109
++
Sbjct: 70 MM 71
>pdb|2JT0|A Chain A, Solution Structure Of F104w Cardiac Troponin C
Length = 161
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 40 ELTPEQVADIQEAFALFDKEG-TGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
+LT EQ + + AF +F GSISTKEL MR LG P D SG
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 99 LLTYKDFLHLVTQKMADKD---SKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIAD 155
+ + +FL ++ + M D S+EE+ FR++D++ G I L+ + GE I +
Sbjct: 71 TVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMWDKNADGYIDLDELKIMLQATGETITE 130
Query: 156 EEIQEMINEADKDGDGEINEEEFLHIMK 183
++I+E++ + DK+ DG I+ +EFL MK
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 135 GKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLHIMKKT 185
G IS L V LG+N EE+QEMI+E D+DG G ++ +EFL +M ++
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRS 84
>pdb|2JT3|A Chain A, Solution Structure Of F153w Cardiac Troponin C
Length = 161
Score = 77.4 bits (189), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 79/148 (53%), Gaps = 4/148 (2%)
Query: 40 ELTPEQVADIQEAFALFDKEG-TGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
+LT EQ + + AF +F GSISTKEL MR LG P D SG
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 99 LLTYKDFLHLVTQKMADKD---SKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIAD 155
+ + +FL ++ + M D S+EE+ FR+FD++ G I L+ + GE I +
Sbjct: 71 TVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITE 130
Query: 156 EEIQEMINEADKDGDGEINEEEFLHIMK 183
++I+E++ + DK+ DG I+ +E+L MK
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEWLEFMK 158
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 135 GKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLHIMKKT 185
G IS L V LG+N EE+QEMI+E D+DG G ++ +EFL +M ++
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRS 84
>pdb|1LA0|A Chain A, Solution Structure Of Calcium Saturated Cardiac Troponin C
In The Troponin C-Troponin I Complex
Length = 161
Score = 77.0 bits (188), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/149 (35%), Positives = 79/149 (53%), Gaps = 6/149 (4%)
Query: 40 ELTPEQVADIQEAFALFDKEG-TGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
+LT EQ + + AF +F G ISTKEL MR LG P D SG
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 99 LLTYKDFLHLVTQKMADKDSK----EEILKAFRLFDEDNTGKISFANLRSVAVELGENIA 154
+ + +FL ++ + M D DSK EE+ FR+FD++ G I L+ + GE I
Sbjct: 71 TVDFDEFLVMMVRCMKD-DSKGKTEEELSDLFRMFDKNADGYIDLEELKIMLQATGETIT 129
Query: 155 DEEIQEMINEADKDGDGEINEEEFLHIMK 183
+++I+E++ + DK+ DG I+ +EFL MK
Sbjct: 130 EDDIEELMKDGDKNNDGRIDYDEFLEFMK 158
>pdb|1F71|A Chain A, Refined Solution Structure Of Calmodulin C-Terminal Domain
pdb|1J7P|A Chain A, Solution Structure Of Calcium Calmodulin C-Terminal Domain
pdb|2K3S|B Chain B, Haddock-Derived Structure Of The Ch-Domain Of The
Smoothelin-Like 1 Complexed With The C-Domain Of
Apocalmodulin
pdb|2KUH|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam C-Terminal Domain
pdb|2LLQ|A Chain A, Solution Nmr-Derived Structure Of Calmodulin C-Lobe Bound
With Er Alpha Peptide
Length = 67
Score = 76.3 bits (186), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/64 (57%), Positives = 47/64 (73%)
Query: 119 KEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEF 178
+EEI +AFR+FD+D G IS A LR V LGE + DEE+ EMI EAD DGDG++N EEF
Sbjct: 1 EEEIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEF 60
Query: 179 LHIM 182
+ +M
Sbjct: 61 VQMM 64
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 22/65 (33%), Positives = 34/65 (52%)
Query: 48 DIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLH 107
+I+EAF +FDK+G G IS EL+ M LG + D G + Y++F+
Sbjct: 3 EIREAFRVFDKDGNGYISAAELRHVMTNLGEKLTDEEVDEMIREADIDGDGQVNYEEFVQ 62
Query: 108 LVTQK 112
++T K
Sbjct: 63 MMTAK 67
>pdb|2JTZ|A Chain A, Solution Structure And Chemical Shift Assignments Of The
F104-To-5-Flurotryptophan Mutant Of Cardiac Troponin C
Length = 161
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 78/148 (52%), Gaps = 4/148 (2%)
Query: 40 ELTPEQVADIQEAFALFDKEG-TGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
+LT EQ + + AF +F GSISTKEL MR LG P D SG
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 99 LLTYKDFLHLVTQKMADKD---SKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIAD 155
+ + +FL ++ + M D S+EE+ FR+ D++ G I L+ + GE I +
Sbjct: 71 TVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMXDKNADGYIDLDELKIMLQATGETITE 130
Query: 156 EEIQEMINEADKDGDGEINEEEFLHIMK 183
++I+E++ + DK+ DG I+ +EFL MK
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEFLEFMK 158
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 135 GKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLHIMKKT 185
G IS L V LG+N EE+QEMI+E D+DG G ++ +EFL +M ++
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRS 84
>pdb|2JT8|A Chain A, Solution Structure Of The F153-To-5-Flurotryptophan Mutant
Of Human Cardiac Troponin C
Length = 161
Score = 75.5 bits (184), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 78/148 (52%), Gaps = 4/148 (2%)
Query: 40 ELTPEQVADIQEAFALFDKEG-TGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
+LT EQ + + AF +F GSISTKEL MR LG P D SG
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 99 LLTYKDFLHLVTQKMADKD---SKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIAD 155
+ + +FL ++ + M D S+EE+ FR+FD++ G I L+ + GE I +
Sbjct: 71 TVDFDEFLVMMVRSMKDDSKGKSEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITE 130
Query: 156 EEIQEMINEADKDGDGEINEEEFLHIMK 183
++I+E++ + DK+ DG I+ +E L MK
Sbjct: 131 DDIEELMKDGDKNNDGRIDYDEXLEFMK 158
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 23/51 (45%), Positives = 33/51 (64%)
Query: 135 GKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLHIMKKT 185
G IS L V LG+N EE+QEMI+E D+DG G ++ +EFL +M ++
Sbjct: 34 GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVDFDEFLVMMVRS 84
>pdb|2ROB|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 C-Terminal Domain
Length = 70
Score = 75.1 bits (183), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 34/66 (51%), Positives = 51/66 (77%)
Query: 117 DSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEE 176
D++EE+ +AF++FD+D G IS + LR V + LGE + DEE+++MI EAD DGDG++N E
Sbjct: 1 DAEEELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYE 60
Query: 177 EFLHIM 182
EF+ +M
Sbjct: 61 EFVKMM 66
Score = 33.9 bits (76), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 48 DIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLH 107
+++EAF +FDK+ G IS EL+ M LG + D G + Y++F+
Sbjct: 5 ELKEAFKVFDKDQNGYISASELRHVMINLGEKLTDEEVEQMIKEADLDGDGQVNYEEFVK 64
Query: 108 LV 109
++
Sbjct: 65 MM 66
>pdb|2AMI|A Chain A, Solution Structure Of The Calcium-Loaded N-Terminal Sensor
Domain Of Centrin
Length = 96
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 35/73 (47%), Positives = 47/73 (64%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
LT EQ +I+EAF LFD +G+G+I KELK+AMRALGFEP D SG +
Sbjct: 24 LTEEQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTI 83
Query: 101 TYKDFLHLVTQKM 113
+++FL ++T KM
Sbjct: 84 DFEEFLTMMTAKM 96
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 31/66 (46%), Positives = 41/66 (62%)
Query: 117 DSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEE 176
+ K+EI +AF LFD D +G I L+ LG EEI++MI+E DKDG G I+ E
Sbjct: 27 EQKQEIREAFDLFDTDGSGTIDAKELKVAMRALGFEPKKEEIKKMISEIDKDGSGTIDFE 86
Query: 177 EFLHIM 182
EFL +M
Sbjct: 87 EFLTMM 92
>pdb|1BR1|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR1|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Alf4 Bound At The Active Site
pdb|1BR4|B Chain B, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|D Chain D, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|F Chain F, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1BR4|H Chain H, Smooth Muscle Myosin Motor Domain-Essential Light Chain
Complex With Mgadp.Bef3 Bound At The Active Site
pdb|1I84|T Chain T, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|W Chain W, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|3DTP|C Chain C, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|D Chain D, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 150
Score = 72.0 bits (175), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/147 (30%), Positives = 76/147 (51%), Gaps = 5/147 (3%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+ + EQ A+ +EAF LFD+ G G I + MRALG P D L
Sbjct: 2 DFSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNL 61
Query: 100 --LTYKDFLHLVTQKMADKDSK--EEILKAFRLFDEDNTGKISFANLRSVAVELGENIAD 155
L ++ FL ++ +KD E+ ++ R+FD++ G + A +R V V LGE + +
Sbjct: 62 KTLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTE 121
Query: 156 EEIQEMINEADKDGDGEINEEEFLHIM 182
EE+++++ +D +G IN EE + ++
Sbjct: 122 EEVEQLV-AGHEDSNGCINYEELVRMV 147
>pdb|3J04|C Chain C, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|F Chain F, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 148
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 75/146 (51%), Gaps = 5/146 (3%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL- 99
+ EQ A+ +EAF LFD+ G G I + MRALG P D L
Sbjct: 1 FSEEQTAEFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSDEMNLK 60
Query: 100 -LTYKDFLHLVTQKMADKDSK--EEILKAFRLFDEDNTGKISFANLRSVAVELGENIADE 156
L ++ FL ++ +KD E+ ++ R+FD++ G + A +R V V LGE + +E
Sbjct: 61 TLKFEQFLPMMQTIAKNKDQGCFEDYVEGLRVFDKEGNGTVMGAEIRHVLVTLGEKMTEE 120
Query: 157 EIQEMINEADKDGDGEINEEEFLHIM 182
E+++++ +D +G IN EE + ++
Sbjct: 121 EVEQLV-AGHEDSNGCINYEELVRMV 145
Score = 30.0 bits (66), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 35/68 (51%), Gaps = 8/68 (11%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINE----- 175
E +AF+LFD GKI ++ V LG+N + E+ +++ D E+N
Sbjct: 8 EFKEAFQLFDRTGDGKILYSQCGDVMRALGQNPTNAEVMKVLGNPKSD---EMNLKTLKF 64
Query: 176 EEFLHIMK 183
E+FL +M+
Sbjct: 65 EQFLPMMQ 72
>pdb|2BL0|B Chain B, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 145
Score = 71.6 bits (174), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/134 (33%), Positives = 69/134 (51%), Gaps = 2/134 (1%)
Query: 49 IQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLHL 108
IQE F +FDK+ G +S +EL A+R+LG P L T+K ++
Sbjct: 7 IQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTIKGQLNAKEFDLATFKT-VYR 65
Query: 109 VTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKD 168
K + SKE +L AFR D++ G I A LR + + LG+ + E++E++ E
Sbjct: 66 KPIKTPTEQSKE-MLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELMKEVSVS 124
Query: 169 GDGEINEEEFLHIM 182
GDG IN E F+ ++
Sbjct: 125 GDGAINYESFVDML 138
Score = 36.2 bits (82), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 20/61 (32%), Positives = 34/61 (55%), Gaps = 8/61 (13%)
Query: 118 SKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEE 177
S ++I + F++FD+DN GK+S L S LG+N + E+ + G++N +E
Sbjct: 3 SADQIQECFQIFDKDNDGKVSIEELGSALRSLGKNPTNAELNTI--------KGQLNAKE 54
Query: 178 F 178
F
Sbjct: 55 F 55
Score = 30.4 bits (67), Expect = 0.58, Method: Compositional matrix adjust.
Identities = 20/81 (24%), Positives = 33/81 (40%), Gaps = 8/81 (9%)
Query: 30 PMKKPSGPKFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXX 89
P+K P+ EQ ++ +AF DKEG G+I EL+ + LG
Sbjct: 67 PIKTPT--------EQSKEMLDAFRALDKEGNGTIQEAELRQLLLNLGDALTSSEVEELM 118
Query: 90 XXXXXDNSGLLTYKDFLHLVT 110
G + Y+ F+ ++
Sbjct: 119 KEVSVSGDGAINYESFVDMLV 139
>pdb|1M46|A Chain A, Crystal Structure Of Mlc1p Bound To Iq4 Of Myo2p, A Class
V Myosin
pdb|1M45|A Chain A, Crystal Structure Of Mlc1p Bound To Iq2 Of Myo2p, A Class
V Myosin
pdb|1N2D|A Chain A, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
pdb|1N2D|B Chain B, Ternary Complex Of Mlc1p Bound To Iq2 And Iq3 Of Myo2p, A
Class V Myosin
Length = 148
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 75/137 (54%), Gaps = 6/137 (4%)
Query: 50 QEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXX-XXXXXDNSGLLTYKDFLHL 108
++ F LFDK+G G+I+ L +RA+G+ P ++ LT L
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGL 66
Query: 109 --VTQKMADKDSK---EEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMIN 163
V +K D +K E+ +KAF++FD+++TGK+S +LR + LGE + D E+ E++
Sbjct: 67 IEVNEKELDATTKAKTEDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLK 126
Query: 164 EADKDGDGEINEEEFLH 180
+ D +GEI+ ++F+
Sbjct: 127 GVEVDSNGEIDYKKFIE 143
Score = 40.8 bits (94), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/123 (25%), Positives = 58/123 (47%), Gaps = 11/123 (8%)
Query: 1 MGAHFRKSNSSPTPIFV----NNNNSIPNATAAPMKKPSG----PKFEL---TPEQVADI 49
+G + R +PT V N ++S+ +A++ + + +G + EL T + D
Sbjct: 26 LGDYLRAIGYNPTNQLVQDIINADSSLRDASSLTLDQITGLIEVNEKELDATTKAKTEDF 85
Query: 50 QEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLHLV 109
+AF +FDKE TG +S +L+ + LG + D++G + YK F+ V
Sbjct: 86 VKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIEDV 145
Query: 110 TQK 112
++
Sbjct: 146 LRQ 148
>pdb|1OE9|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain - Nucleotide-Free
pdb|1W7I|B Chain B, Crystal Structure Of Myosin V Motor Without Nucleotide
Soaked In 10 Mm Mgadp
pdb|1W7J|B Chain B, Crystal Structure Of Myosin V Motor With Essential Light
Chain + Adp-Befx - Near Rigor
Length = 151
Score = 68.9 bits (167), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 75/148 (50%), Gaps = 6/148 (4%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXD--NS 97
E +Q+ + +EAF LFD+ G G I + MRALG P D S
Sbjct: 3 EFNKDQLEEFKEAFELFDRVGDGKILYSQCGDVMRALGQNPTNAEVLKVLGNPKSDELKS 62
Query: 98 GLLTYKDFLHLV--TQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIAD 155
+ ++ FL ++ K + + E+ L+ FR+FD++ GK+ A LR V LGE + +
Sbjct: 63 RRVDFETFLPMLQAVAKNRGQGTYEDYLEGFRVFDKEGNGKVMGAELRHVLTTLGEKMTE 122
Query: 156 EEIQEMINEADKDGDGEINEEEFL-HIM 182
EE+ E + +D +G IN E FL HI+
Sbjct: 123 EEV-ETVLAGHEDSNGCINYEAFLKHIL 149
>pdb|1S6I|A Chain A, Ca2+-Regulatory Region (Cld) From Soybean
Calcium-Dependent Protein Kinase-Alpha (Cdpk) In The
Presence Of Ca2+ And The Junction Domain (Jd)
Length = 188
Score = 67.4 bits (163), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/144 (28%), Positives = 75/144 (52%), Gaps = 3/144 (2%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
L+ E++ ++E F + D + +G+I+ ELK ++ +G E D SG +
Sbjct: 4 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTI 63
Query: 101 TYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQE 160
Y +F+ T + + +E ++ AF FD+D +G I+ ++ + G + D I +
Sbjct: 64 DYGEFIA-ATVHLNKLEREENLVSAFSYFDKDGSGYITLDEIQQACKDFG--LDDIHIDD 120
Query: 161 MINEADKDGDGEINEEEFLHIMKK 184
MI E D+D DG+I+ EF +M+K
Sbjct: 121 MIKEIDQDNDGQIDYGEFAAMMRK 144
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 43/69 (62%), Gaps = 3/69 (4%)
Query: 114 ADKDSKEEI--LK-AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
A++ S+EEI LK F++ D DN+G I+F L+ +G + + EI+++++ AD D
Sbjct: 1 AERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKS 60
Query: 171 GEINEEEFL 179
G I+ EF+
Sbjct: 61 GTIDYGEFI 69
>pdb|2AAO|A Chain A, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
pdb|2AAO|B Chain B, Regulatory Apparatus Of Calcium Dependent Protein Kinase
From Arabidopsis Thaliana
Length = 166
Score = 67.0 bits (162), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/147 (29%), Positives = 76/147 (51%), Gaps = 3/147 (2%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
L+ E++A ++E F D + +G I+ +ELK ++ +G DNSG +
Sbjct: 21 LSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDNSGTI 80
Query: 101 TYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQE 160
YK+F+ T + + ++ + AF FD+D +G I+ L+ E G + D I+E
Sbjct: 81 DYKEFI-AATLHLNKIEREDHLFAAFTYFDKDGSGYITPDELQQACEEFG--VEDVRIEE 137
Query: 161 MINEADKDGDGEINEEEFLHIMKKTSL 187
+ + D+D DG I+ EF+ +K S+
Sbjct: 138 LXRDVDQDNDGRIDYNEFVAXXQKGSI 164
Score = 37.0 bits (84), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 43/78 (55%), Gaps = 7/78 (8%)
Query: 113 MADKDSKEEIL---KAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDG 169
+A+ S+EEI + F D D +G+I+F L++ +G N+ + EI ++ AD D
Sbjct: 17 IAESLSEEEIAGLKEXFNXIDADKSGQITFEELKAGLKRVGANLKESEILDLXQAADVDN 76
Query: 170 DGEINEEEF----LHIMK 183
G I+ +EF LH+ K
Sbjct: 77 SGTIDYKEFIAATLHLNK 94
>pdb|2LLO|A Chain A, Solution Nmr-Derived Structure Of Calmodulin N-Lobe Bound
With Er Alpha Peptide
Length = 80
Score = 66.6 bits (161), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 32/78 (41%), Positives = 48/78 (61%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 100 LTYKDFLHLVTQKMADKD 117
+ + +FL ++ +KM D D
Sbjct: 63 IDFPEFLTMMARKMKDTD 80
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 114 ADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
AD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 171 GEINEEEFLHIMKK 184
G I+ EFL +M +
Sbjct: 61 GTIDFPEFLTMMAR 74
>pdb|2RO8|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 1 N-Terminal Domain
Length = 79
Score = 65.1 bits (157), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+++ +EAF+LFDK+G G I+TKEL MR+LG P D +G
Sbjct: 3 QLTDEQISEFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 100 LTYKDFLHLVTQKMAD 115
+ + +FL+L+ +KM D
Sbjct: 63 IDFPEFLNLMARKMKD 78
Score = 57.0 bits (136), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 42/64 (65%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+G I+ EFL+
Sbjct: 11 EFKEAFSLFDKDGDGCITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLN 70
Query: 181 IMKK 184
+M +
Sbjct: 71 LMAR 74
>pdb|3UCT|A Chain A, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCT|B Chain B, Structure Of Mn2+-Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
pdb|3UCW|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|B Chain B, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|C Chain C, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCW|D Chain D, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin
pdb|3UCY|A Chain A, Structure Of Mg2+ Bound N-Terminal Domain Of Calmodulin In
The Presence Of Zn2+
Length = 79
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 47/76 (61%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 100 LTYKDFLHLVTQKMAD 115
+ + +FL ++ +KM D
Sbjct: 63 IDFPEFLTMMARKMKD 78
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 114 ADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
AD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 171 GEINEEEFLHIMKK 184
G I+ EFL +M +
Sbjct: 61 GTIDFPEFLTMMAR 74
>pdb|2JNF|A Chain A, Solution Structure Of Fly Troponin C, Isoform F1
Length = 158
Score = 64.7 bits (156), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 41/147 (27%), Positives = 77/147 (52%), Gaps = 5/147 (3%)
Query: 41 LTPEQVADIQEAFALFDK-EGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
L+ QV ++ AF F+ EG+G +ST ++ I + LG + +G
Sbjct: 7 LSSNQVKLLETAFRDFETPEGSGRVSTDQIGIILEVLGIQQTKSTIRQLIDEFDPFGNGD 66
Query: 100 LTYKDF----LHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIAD 155
+ + F + +++ + ++E+ +AFRL+D++ G IS +R + EL E ++
Sbjct: 67 IDFDSFKIIGARFLGEEVNPEQMQQELREAFRLYDKEGNGYISTDVMREILAELDETLSS 126
Query: 156 EEIQEMINEADKDGDGEINEEEFLHIM 182
E++ MI+E D DG G ++ EEF+ +M
Sbjct: 127 EDLDAMIDEIDADGSGTVDFEEFMGVM 153
>pdb|1SW8|A Chain A, Solution Structure Of The N-Terminal Domain Of Human N60d
Calmodulin Refined With Paramagnetism Based Strategy
Length = 79
Score = 64.3 bits (155), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 31/76 (40%), Positives = 46/76 (60%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGDGT 62
Query: 100 LTYKDFLHLVTQKMAD 115
+ + +FL ++ +KM D
Sbjct: 63 IDFPEFLTMMARKMKD 78
Score = 58.9 bits (141), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 114 ADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
AD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DGD
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGD 60
Query: 171 GEINEEEFLHIMKK 184
G I+ EFL +M +
Sbjct: 61 GTIDFPEFLTMMAR 74
>pdb|2LQC|A Chain A, Nmr Solution Structure Of A Ca2+-Calmodulin With A Binding
Motif (Nscate) Peptide From The N-Terminal Cytoplasmic
Domain Of The L-Type Voltage-Cated Calcium Channel
Alpha1c Subunit
Length = 77
Score = 63.2 bits (152), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 100 LTYKDFLHLVTQKM 113
+ + +FL ++ +KM
Sbjct: 63 IDFPEFLTMMARKM 76
Score = 57.0 bits (136), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 114 ADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
AD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 171 GEINEEEFLHIMKK 184
G I+ EFL +M +
Sbjct: 61 GTIDFPEFLTMMAR 74
>pdb|1F70|A Chain A, Refined Solution Structure Of Calmodulin N-Terminal Domain
pdb|2PQ3|A Chain A, N-Terminal Calmodulin Zn-Trapped Intermediate
pdb|2KUG|A Chain A, Halothane Binds To Druggable Sites In Calcium-Calmodulin:
Solution Structure Of Halothane-Cam N-Terminal Domain
Length = 76
Score = 63.2 bits (152), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 100 LTYKDFLHLVTQKM 113
+ + +FL ++ +KM
Sbjct: 63 IDFPEFLTMMARKM 76
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 114 ADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
AD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 171 GEINEEEFLHIMKK 184
G I+ EFL +M +
Sbjct: 61 GTIDFPEFLTMMAR 74
>pdb|1J7O|A Chain A, Solution Structure Of Calcium-calmodulin N-terminal Domain
Length = 76
Score = 62.8 bits (151), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 46/74 (62%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 100 LTYKDFLHLVTQKM 113
+ + +FL ++ +KM
Sbjct: 63 IDFPEFLTMMARKM 76
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 29/64 (45%), Positives = 41/64 (64%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+G I+ EFL
Sbjct: 11 EFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 181 IMKK 184
+M +
Sbjct: 71 MMAR 74
>pdb|2BL0|C Chain C, Physarum Polycephalum Myosin Ii Regulatory Domain
Length = 142
Score = 62.0 bits (149), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/141 (28%), Positives = 71/141 (50%), Gaps = 5/141 (3%)
Query: 44 EQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYK 103
+QV++ +EAF LFD E TG I+ + L+ ++ G +G + +
Sbjct: 3 DQVSEFKEAFELFDSERTGFITKEGLQTVLKQFGVRVEPAAFNEMFNEADATGNGKIQFP 62
Query: 104 DFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEM-- 161
+FL ++ ++M S++ + +AFR FD + TG I A L+ + LG+ + E E
Sbjct: 63 EFLSMMGRRMKQTTSEDILRQAFRTFDPEGTGYIPKAALQDALLNLGDRLKPHEFAEFLG 122
Query: 162 INEADKDGDGEINEEEFLHIM 182
I E +K G+I + F++ M
Sbjct: 123 ITETEK---GQIRYDNFINTM 140
>pdb|3B32|A Chain A, Crystal Structure Of Calcium-Saturated Calmodulin
N-Terminal Domain Fragment, Residues 1-75
Length = 75
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 3 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 62
Query: 100 LTYKDFLHLVTQK 112
+ + +FL ++ +K
Sbjct: 63 IDFPEFLTMMARK 75
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 114 ADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
AD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+
Sbjct: 1 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 60
Query: 171 GEINEEEFLHIMKK 184
G I+ EFL +M +
Sbjct: 61 GTIDFPEFLTMMAR 74
>pdb|1AK8|A Chain A, Nmr Solution Structure Of Cerium-Loaded Calmodulin Amino-
Terminal Domain (Ce2-Tr1c), 23 Structures
Length = 76
Score = 60.8 bits (146), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 45/73 (61%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+LFDK+G G+I+TKEL MR+LG P D +G
Sbjct: 4 QLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGNGT 63
Query: 100 LTYKDFLHLVTQK 112
+ + +FL ++ +K
Sbjct: 64 IDFPEFLTMMARK 76
Score = 57.4 bits (137), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 114 ADKDSKEEILK---AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
AD+ ++E+I + AF LFD+D G I+ L +V LG+N + E+Q+MINE D DG+
Sbjct: 2 ADQLTEEQIAEFKEAFSLFDKDGDGTITTKELGTVMRSLGQNPTEAELQDMINEVDADGN 61
Query: 171 GEINEEEFLHIMKK 184
G I+ EFL +M +
Sbjct: 62 GTIDFPEFLTMMAR 75
>pdb|2JOJ|A Chain A, Nmr Solution Structure Of N-Terminal Domain Of Euplotes
Octocarinatus Centrin
Length = 77
Score = 60.8 bits (146), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 31/77 (40%), Positives = 46/77 (59%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
L+ EQ +I+EAF LFD TGSI ELK+AMRALGF+ + +G +
Sbjct: 1 LSEEQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYI 60
Query: 101 TYKDFLHLVTQKMADKD 117
+ DFL ++T+K+ ++D
Sbjct: 61 GFDDFLDIMTEKIKNRD 77
Score = 51.2 bits (121), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 27/66 (40%), Positives = 42/66 (63%)
Query: 117 DSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEE 176
+ K+EI +AF LFD + TG I + L+ LG ++ EI E++NE D++G+G I +
Sbjct: 4 EQKQEIKEAFDLFDTNKTGSIDYHELKVAMRALGFDVKKPEILELMNEYDREGNGYIGFD 63
Query: 177 EFLHIM 182
+FL IM
Sbjct: 64 DFLDIM 69
>pdb|2I08|A Chain A, Solvation Effect In Conformational Changes Of Ef-Hand
Proteins: X-Ray Structure Of Ca2+-Saturated Double
Mutant Q41l-K75i Of N-Domain Of Calmodulin
Length = 78
Score = 60.5 bits (145), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 28/74 (37%), Positives = 45/74 (60%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+LT EQ+A+ +EAF+L+DK+G G+I+TKEL MR+LG P D +G
Sbjct: 3 QLTEEQIAEFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGT 62
Query: 100 LTYKDFLHLVTQKM 113
+ + +FL ++ + M
Sbjct: 63 IDFPEFLTMMARIM 76
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 29/68 (42%), Positives = 41/68 (60%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF L+D+D G I+ L +V LG N + E+Q+MINE D DG+G I+ EFL
Sbjct: 11 EFKEAFSLYDKDGDGTITTKELGTVMRSLGLNPTEAELQDMINEVDADGNGTIDFPEFLT 70
Query: 181 IMKKTSLY 188
+M + Y
Sbjct: 71 MMARIMKY 78
>pdb|3J04|B Chain B, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
pdb|3J04|E Chain E, Em Structure Of The Heavy Meromyosin Subfragment Of Chick
Smooth Muscle Myosin With Regulatory Light Chain In
Phosphorylated State
Length = 143
Score = 60.1 bits (144), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/139 (28%), Positives = 66/139 (47%), Gaps = 4/139 (2%)
Query: 45 QVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKD 104
Q+ + +EAF + D+ G I ++L + ++G P + G + +
Sbjct: 5 QIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMS----EAPGPINFTM 60
Query: 105 FLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINE 164
FL + +K+ D ++ I AF FDE+ +G I +LR + +G+ DEE+ EM E
Sbjct: 61 FLTMFGEKLNGTDPEDVIRNAFACFDEEASGFIHEDHLRELLTTMGDRFTDEEVDEMYRE 120
Query: 165 ADKDGDGEINEEEFLHIMK 183
A D G N EF I+K
Sbjct: 121 APIDKKGNFNYVEFTRILK 139
Score = 30.0 bits (66), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 15/51 (29%), Positives = 29/51 (56%)
Query: 115 DKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEA 165
D+ +E +AF + D++ G I +L + +G+N DE ++ M++EA
Sbjct: 2 DQSQIQEFKEAFNMIDQNRDGFIDKEDLHDMLASMGKNPTDEYLEGMMSEA 52
>pdb|2MYS|C Chain C, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
Length = 149
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/148 (30%), Positives = 77/148 (52%), Gaps = 6/148 (4%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXD--NS 97
E + D +EAF LFD+ G I+ ++ RALG P + N+
Sbjct: 1 EFSKAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNA 60
Query: 98 GLLTYKDFLHLVTQKMADKDSK--EEILKAFRLFDEDNTGKISFANLRSVAVELGENIAD 155
+T+++FL ++ +KD E+ ++ R+FD++ G + A LR V LGE + +
Sbjct: 61 AAITFEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTE 120
Query: 156 EEIQEMINEADKDGDGEINEEEFL-HIM 182
EE++E++ + +D +G IN E F+ HIM
Sbjct: 121 EEVEELM-KGQEDSNGCINYEAFVKHIM 147
>pdb|1GGW|A Chain A, Cdc4p From Schizosaccharomyces Pombe
Length = 140
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/135 (28%), Positives = 65/135 (48%), Gaps = 7/135 (5%)
Query: 50 QEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLHLV 109
++AF+LFD+ GTG I + +RA G P + + + FL ++
Sbjct: 8 KQAFSLFDRHGTGRIPKTSIGDLLRACGQNPTLAEITEIESTLPAE----VDMEQFLQVL 63
Query: 110 TQK--MADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADK 167
+ EE +K F++FD+D TG I LR V LGE +++EE+ E++
Sbjct: 64 NRPNGFDMPGDPEEFVKGFQVFDKDATGMIGVGELRYVLTSLGEKLSNEEMDELLKGVPV 123
Query: 168 DGDGEINEEEFLHIM 182
DG +N +F+ ++
Sbjct: 124 K-DGMVNYHDFVQMI 137
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 20/79 (25%), Positives = 35/79 (44%), Gaps = 4/79 (5%)
Query: 31 MKKPSGPKFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXX 90
+ +P+G PE+ + F +FDK+ TG I EL+ + +LG E
Sbjct: 63 LNRPNGFDMPGDPEEFV---KGFQVFDKDATGMIGVGELRYVLTSLG-EKLSNEEMDELL 118
Query: 91 XXXXDNSGLLTYKDFLHLV 109
G++ Y DF+ ++
Sbjct: 119 KGVPVKDGMVNYHDFVQMI 137
>pdb|1M8Q|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|U Chain U, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|C Chain C, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|F Chain F, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|I Chain I, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|L Chain L, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|O Chain O, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|R Chain R, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 147
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 75/140 (53%), Gaps = 6/140 (4%)
Query: 48 DIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXD--NSGLLTYKDF 105
D +EAF LFD+ G I+ ++ RALG P + N+ +T+++F
Sbjct: 7 DFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAITFEEF 66
Query: 106 LHLVTQKMADKDSK--EEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMIN 163
L ++ +KD E+ ++ R+FD++ G + A LR V LGE + +EE++E++
Sbjct: 67 LPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVEELM- 125
Query: 164 EADKDGDGEINEEEFL-HIM 182
+ +D +G IN E F+ HIM
Sbjct: 126 KGQEDSNGCINYEAFVKHIM 145
Score = 30.4 bits (67), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 38/73 (52%), Gaps = 2/73 (2%)
Query: 116 KDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKD--GDGEI 173
K + ++ +AF LFD KI+ + + +A LG+N + EI +++ K+ I
Sbjct: 2 KAAADDFKEAFLLFDRTGDAKITASQVGDIARALGQNPTNAEINKILGNPSKEEMNAAAI 61
Query: 174 NEEEFLHIMKKTS 186
EEFL +++ +
Sbjct: 62 TFEEFLPMLQAAA 74
>pdb|2W4A|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|C Chain C, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 145
Score = 59.3 bits (142), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 44/144 (30%), Positives = 79/144 (54%), Gaps = 6/144 (4%)
Query: 44 EQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXD--NSGLLT 101
+++ D +EAF LFD+ G I+ ++ +RALG P + N+ +T
Sbjct: 1 DEINDFKEAFLLFDRTGDAKITLSQVGDIVRALGQNPTNAEINKILGNPSKEEMNAKKIT 60
Query: 102 YKDFLHLVTQKMADKDSK--EEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
+++FL ++ +KD E+ ++ R+FD++ G + A LR V LGE + +EE++
Sbjct: 61 FEEFLPMLQAAANNKDQGTFEDFVEGLRVFDKEGNGTVMGAELRHVLATLGEKMTEEEVE 120
Query: 160 EMINEADKDGDGEINEEEFL-HIM 182
E++ + +D +G IN E F+ HIM
Sbjct: 121 ELM-KGQEDSNGCINYEAFVKHIM 143
>pdb|3PM8|A Chain A, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
pdb|3PM8|B Chain B, Cad Domain Of Pff0520w, Calcium Dependent Protein Kinase
Length = 197
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/147 (26%), Positives = 71/147 (48%), Gaps = 3/147 (2%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
L ++ +++ F D + +G++S++E+ ++ +G++ + SG
Sbjct: 50 HLCDVEINNLRNIFIALDVDNSGTLSSQEILDGLKKIGYQKIPPDIHQVLRDIDSNASGQ 109
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSV--AVELGENIADEE 157
+ Y DFL K KE L F+ FD D GKIS L+ + ++ + D+
Sbjct: 110 IHYTDFLAATIDKQT-YLKKEVCLIPFKFFDIDGNGKISVEELKRIFGRDDIENPLIDKA 168
Query: 158 IQEMINEADKDGDGEINEEEFLHIMKK 184
I ++ E D +GDGEI+ EF+ +M K
Sbjct: 169 IDSLLQEVDLNGDGEIDFHEFMLMMSK 195
>pdb|1F54|A Chain A, Solution Structure Of The Apo N-Terminal Domain Of Yeast
Calmodulin
pdb|1F55|A Chain A, Solution Structure Of The Calcium Bound N-Terminal Domain
Of Yeast Calmodulin
Length = 77
Score = 58.9 bits (141), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 43/73 (58%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
LT EQ+A+ +EAFALFDK+ GSIS+ EL MR+LG P D + +
Sbjct: 4 LTEEQIAEFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQI 63
Query: 101 TYKDFLHLVTQKM 113
+ +FL L+++++
Sbjct: 64 EFSEFLALMSRQL 76
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 26/64 (40%), Positives = 41/64 (64%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +AF LFD+DN G IS + L +V LG + ++ E+ +++NE D DG+ +I EFL
Sbjct: 11 EFKEAFALFDKDNNGSISSSELATVMRSLGLSPSEAEVNDLMNEIDVDGNHQIEFSEFLA 70
Query: 181 IMKK 184
+M +
Sbjct: 71 LMSR 74
>pdb|3DTP|E Chain E, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
pdb|3DTP|F Chain F, Tarantula Heavy Meromyosin Obtained By Flexible Docking To
Tarantula Muscle Thick Filament Cryo-Em 3d-Map
Length = 196
Score = 57.4 bits (137), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 70/144 (48%), Gaps = 5/144 (3%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
T QV + +EAF L D++ G IS +++ +LG + G +
Sbjct: 51 FTQHQVQEFKEAFQLIDQDKDGFISKNDIRATFDSLG----RLCTEQELDSMVAEAPGPI 106
Query: 101 TYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQE 160
+ FL + ++A D ++ I+ AF LFDE + GK L+ GE + +E+ +
Sbjct: 107 NFTMFLTIFGDRIAGTDEEDVIVNAFNLFDEGD-GKCKEETLKRSLTTWGEKFSQDEVDQ 165
Query: 161 MINEADKDGDGEINEEEFLHIMKK 184
++EA DG+G I+ ++F I+ K
Sbjct: 166 ALSEAPIDGNGLIDIKKFAQILTK 189
>pdb|2HF5|A Chain A, The Structure And Function Of A Novel Two-Site Calcium-
Binding Fragment Of Calmodulin
Length = 68
Score = 56.6 bits (135), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 38/56 (67%)
Query: 95 DNSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELG 150
D +G + + +FL ++ +KM D DS+EEI +AFR+FD+D G IS A LR V LG
Sbjct: 13 DGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVMTNLG 68
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 16/30 (53%), Positives = 21/30 (70%)
Query: 48 DIQEAFALFDKEGTGSISTKELKIAMRALG 77
+I+EAF +FDK+G G IS EL+ M LG
Sbjct: 39 EIREAFRVFDKDGNGYISAAELRHVMTNLG 68
Score = 33.9 bits (76), Expect = 0.057, Method: Compositional matrix adjust.
Identities = 15/28 (53%), Positives = 21/28 (75%)
Query: 157 EIQEMINEADKDGDGEINEEEFLHIMKK 184
E+Q+MINE D DG+G I+ EFL +M +
Sbjct: 2 ELQDMINEVDADGNGTIDFPEFLTMMAR 29
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 30/54 (55%), Gaps = 1/54 (1%)
Query: 130 DEDNTGKISFAN-LRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLHIM 182
D D G I F L +A ++ + ++EEI+E DKDG+G I+ E H+M
Sbjct: 11 DADGNGTIDFPEFLTMMARKMKDTDSEEEIREAFRVFDKDGNGYISAAELRHVM 64
>pdb|3O4Y|A Chain A, Crystal Structure Of Cad Domain Of The Plasmodium Vivax
Cdpk, Pvx_11610
Length = 196
Score = 56.2 bits (134), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/145 (32%), Positives = 73/145 (50%), Gaps = 8/145 (5%)
Query: 46 VADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDF 105
V ++ AF D+EG G+I+ +L+ + G D SG + Y +F
Sbjct: 54 VQKLKAAFLHLDEEGKGNITKLQLRKGLERSGL-MLPPNFDLLLDQIDSDGSGNIDYTEF 112
Query: 106 LHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGE--NIADE---EIQE 160
L + + SK+ I AFR+FD DN G+I+ A L V + NI + ++++
Sbjct: 113 LAAAIDRR--QLSKKLIYCAFRVFDVDNDGEITTAELAHVLFNGNKRGNITERDVNQVKK 170
Query: 161 MINEADKDGDGEINEEEFLHIMKKT 185
MI E DK+GDG+I+ EF +MK T
Sbjct: 171 MIREVDKNGDGKIDFYEFSEMMKLT 195
>pdb|3PN7|C Chain C, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|F Chain F, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|C Chain C, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|F Chain F, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TUY|C Chain C, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|F Chain F, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 156
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Query: 41 LTPEQVADIQEAFALFD-KEGT-GSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
L+ +++ D++E F LFD +G G++ ++ R LG P
Sbjct: 3 LSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAVGGTHKMGEKS 62
Query: 99 LLTYKDFLHLVTQKM-ADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEE 157
L +++FL M ++ + + ++AF+ FD + G IS A LR V LGE ++DEE
Sbjct: 63 L-PFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEE 121
Query: 158 IQEMINEAD--KDGDGEINEEEFL 179
+ E+IN D +D +G + EEF+
Sbjct: 122 VDEIINLTDLQEDLEGNVKYEEFV 145
>pdb|2OS8|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|C Chain C, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Query: 41 LTPEQVADIQEAFALFD-KEGT-GSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
L+ +++ D++E F LFD +G G++ ++ R LG P
Sbjct: 4 LSQDEIDDLKEVFELFDFWDGRDGAVDAFKIGDVCRCLGINPRNEDVFAVGGTHKMGEKS 63
Query: 99 LLTYKDFLHLVTQKM-ADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEE 157
L +++FL M ++ + + ++AF+ FD + G IS A LR V LGE ++DEE
Sbjct: 64 L-PFEEFLPAYEGLMDCEQGTYADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEE 122
Query: 158 IQEMINEAD--KDGDGEINEEEFL 179
+ E+IN D +D +G + EEF+
Sbjct: 123 VDEIINLTDLQEDLEGNVKYEEFV 146
>pdb|2OS8|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
pdb|2OTG|B Chain B, Rigor-Like Structures Of Muscle Myosins Reveal Key
Mechanical Elements In The Transduction Pathways Of This
Allosteric Motor
Length = 157
Score = 55.8 bits (133), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/152 (26%), Positives = 76/152 (50%), Gaps = 5/152 (3%)
Query: 32 KKPSGPKFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXX 91
K SG +L +Q+ +++EAF + D+ G I +LK +LG P
Sbjct: 4 KAASGVLTKLPQKQIQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLK- 62
Query: 92 XXXDNSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGE 151
+ G L + FL + + K++ DS+E I AF +FDE +T K++ ++ + +G+
Sbjct: 63 ---EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGD 119
Query: 152 NIADEEIQEMINEADKDGDGEINEEEFLHIMK 183
N +E++ EA +G G+ + F+ ++K
Sbjct: 120 NFNKDEMRMTFKEAPVEG-GKFDYVRFVAMIK 150
>pdb|1TCO|B Chain B, Ternary Complex Of A Calcineurin A Fragment, Calcineurin
B, Fkbp12 And The Immunosuppressant Drug Fk506
(tacrolimus)
pdb|1AUI|B Chain B, Human Calcineurin Heterodimer
pdb|1M63|B Chain B, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
pdb|1M63|F Chain F, Crystal Structure Of Calcineurin-Cyclophilin-Cyclosporin
Shows Common But Distinct Recognition Of
Immunophilin-Drug Complexes
Length = 169
Score = 55.5 bits (132), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/163 (26%), Positives = 83/163 (50%), Gaps = 13/163 (7%)
Query: 25 NATAAPMKKPSGPKFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXX 84
N + P++ S +++ + + F D + +GS+S +E +++ L P
Sbjct: 2 NEASYPLEMCS----HFDADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPLVQR 56
Query: 85 XXXXXXXXXXDNSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRS 144
D +G + +K+F+ V+Q D ++++ AFR++D D G IS L
Sbjct: 57 VIDIFDT---DGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQ 113
Query: 145 V-AVELGENIADEEIQEMINE----ADKDGDGEINEEEFLHIM 182
V + +G N+ D ++Q+++++ ADKDGDG I+ EEF ++
Sbjct: 114 VLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 156
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 115 DKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEIN 174
D D + + K F+ D DN+G +S S+ EL +N +Q +I+ D DG+GE++
Sbjct: 15 DADEIKRLGKRFKKLDLDNSGSLSVEEFMSLP-ELQQNPL---VQRVIDIFDTDGNGEVD 70
Query: 175 EEEFLHIMKKTSL 187
+EF+ + + S+
Sbjct: 71 FKEFIEGVSQFSV 83
>pdb|2ROA|A Chain A, Solution Structure Of Calcium Bound Soybean Calmodulin
Isoform 4 N-Terminal Domain
Length = 79
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 114 ADKDSKEEIL---KAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
AD S+E+I+ +AF LFD+D G I+ L +V L +N +EE+Q+MI+E D DG+
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 171 GEINEEEFLHIMKK 184
G I +EFL +M K
Sbjct: 61 GTIEFDEFLSLMAK 74
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 41/75 (54%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
L+ EQ+ D +EAF LFDK+G G I+ +EL +R+L P D +G +
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 101 TYKDFLHLVTQKMAD 115
+ +FL L+ +K+ D
Sbjct: 64 EFDEFLSLMAKKVKD 78
>pdb|1MF8|B Chain B, Crystal Structure Of Human Calcineurin Complexed With
Cyclosporin A And Human Cyclophilin
Length = 170
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/165 (26%), Positives = 84/165 (50%), Gaps = 13/165 (7%)
Query: 23 IPNATAAPMKKPSGPKFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXX 82
+ N + P++ S +++ + + F D + +GS+S +E +++ L P
Sbjct: 1 MGNEASYPLEMCS----HFDADEIKRLGKRFKKLDLDNSGSLSVEEF-MSLPELQQNPLV 55
Query: 83 XXXXXXXXXXXXDNSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANL 142
D +G + +K+F+ V+Q D ++++ AFR++D D G IS L
Sbjct: 56 QRVIDIFDT---DGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGEL 112
Query: 143 RSV-AVELGENIADEEIQEMINE----ADKDGDGEINEEEFLHIM 182
V + +G N+ D ++Q+++++ ADKDGDG I+ EEF ++
Sbjct: 113 FQVLKMMVGNNLKDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 157
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 115 DKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEIN 174
D D + + K F+ D DN+G +S S+ EL +N +Q +I+ D DG+GE++
Sbjct: 16 DADEIKRLGKRFKKLDLDNSGSLSVEEFMSLP-ELQQNPL---VQRVIDIFDTDGNGEVD 71
Query: 175 EEEFLHIMKKTSL 187
+EF+ + + S+
Sbjct: 72 FKEFIEGVSQFSV 84
>pdb|2KSZ|A Chain A, The Solution Structure Of The Magnesium Bound Soybean
Calmod Isoform 4 N-Domain
Length = 76
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/74 (44%), Positives = 48/74 (64%), Gaps = 3/74 (4%)
Query: 114 ADKDSKEEIL---KAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
AD S+E+I+ +AF LFD+D G I+ L +V L +N +EE+Q+MI+E D DG+
Sbjct: 1 ADILSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGN 60
Query: 171 GEINEEEFLHIMKK 184
G I +EFL +M K
Sbjct: 61 GTIEFDEFLSLMAK 74
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 40/73 (54%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
L+ EQ+ D +EAF LFDK+G G I+ +EL +R+L P D +G +
Sbjct: 4 LSEEQIVDFKEAFGLFDKDGDGCITVEELATVIRSLDQNPTEEELQDMISEVDADGNGTI 63
Query: 101 TYKDFLHLVTQKM 113
+ +FL L+ +K+
Sbjct: 64 EFDEFLSLMAKKV 76
>pdb|1WDC|B Chain B, Scallop Myosin Regulatory Domain
pdb|1B7T|Y Chain Y, Myosin Digested By Papain
pdb|1KK7|Y Chain Y, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|B Chain B, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|B Chain B, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|B Chain B, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Y Chain Y, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Y Chain Y, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|B Chain B, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JTD|B Chain B, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
pdb|3JVT|B Chain B, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 55.1 bits (131), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 77/152 (50%), Gaps = 5/152 (3%)
Query: 32 KKPSGPKFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXX 91
K SG +L +Q+ +++EAF++ D + G +S +++K LG P
Sbjct: 3 KAASGVLTKLPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK- 61
Query: 92 XXXDNSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGE 151
+ G L + FL + + K++ DS+E I AF +FDE T K++ ++ + +G+
Sbjct: 62 ---EAPGPLNFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGD 118
Query: 152 NIADEEIQEMINEADKDGDGEINEEEFLHIMK 183
N +E++ EA +G G+ + +F ++K
Sbjct: 119 NFNKDEMRMTFKEAPVEG-GKFDYVKFTAMIK 149
>pdb|1C7V|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
pdb|1C7W|A Chain A, Nmr Solution Structure Of The Calcium-Bound C-Terminal
Domain (W81-S161) Of Calcium Vector Protein From
Amphioxus
Length = 81
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 49/71 (69%), Gaps = 1/71 (1%)
Query: 116 KDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGEN-IADEEIQEMINEADKDGDGEIN 174
+D +EEIL+AF++FD + G I F + + ++GE + D E++E + EAD+DG+G I+
Sbjct: 4 QDDEEEILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVID 63
Query: 175 EEEFLHIMKKT 185
EF+ ++KK+
Sbjct: 64 IPEFMDLIKKS 74
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 18/65 (27%), Positives = 29/65 (44%), Gaps = 1/65 (1%)
Query: 48 DIQEAFALFDKEGTGSISTKELKIAMRALGFEP-XXXXXXXXXXXXXXDNSGLLTYKDFL 106
+I AF +FD G G I E K M+ +G EP D +G++ +F+
Sbjct: 9 EILRAFKVFDANGDGVIDFDEFKFIMQKVGEEPLTDAEVEEAMKEADEDGNGVIDIPEFM 68
Query: 107 HLVTQ 111
L+ +
Sbjct: 69 DLIKK 73
>pdb|2EC6|C Chain C, Placopecten Striated Muscle Myosin Ii
Length = 156
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 73/144 (50%), Gaps = 6/144 (4%)
Query: 41 LTPEQVADIQEAFALFD-KEGT-GSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
L+ +++ D+++ F LFD +G G++ +L R LG P
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 62
Query: 99 LLTYKDFLHLVTQKM-ADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEE 157
L +++FL M ++ + + ++AF+ FD + G IS A LR V LGE ++DEE
Sbjct: 63 L-PFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLSGLGERLSDEE 121
Query: 158 IQEMINEAD--KDGDGEINEEEFL 179
+ E+IN D +D +G + EEF+
Sbjct: 122 VDEIINLTDLQEDLEGNVKYEEFV 145
>pdb|3I5G|B Chain B, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|B Chain B, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|B Chain B, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|B Chain B, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 153
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/128 (27%), Positives = 65/128 (50%), Gaps = 4/128 (3%)
Query: 38 KFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNS 97
+ +L+ Q+ +++EAF + D++ G I ++LK +LG P +
Sbjct: 7 RVKLSQRQMQELKEAFTMIDQDRDGFIGMEDLKDMFSSLGRVPPDDELNAMLK----ECP 62
Query: 98 GLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEE 157
G L + FL L +K++ D ++ + AF +FDED G I L+ + +G+N + EE
Sbjct: 63 GQLNFTAFLTLFGEKVSGTDPEDALRNAFSMFDEDGQGFIPEDYLKDLLENMGDNFSKEE 122
Query: 158 IQEMINEA 165
I+ + +A
Sbjct: 123 IKNVWKDA 130
>pdb|2P6B|B Chain B, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
pdb|2P6B|D Chain D, Crystal Structure Of Human Calcineurin In Complex With
Pvivit Peptide
Length = 156
Score = 54.7 bits (130), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 57/93 (61%), Gaps = 5/93 (5%)
Query: 95 DNSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSV-AVELGENI 153
D +G + +K+F+ V+Q D ++++ AFR++D D G IS L V + +G N+
Sbjct: 51 DGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNL 110
Query: 154 ADEEIQEMINE----ADKDGDGEINEEEFLHIM 182
D ++Q+++++ ADKDGDG I+ EEF ++
Sbjct: 111 KDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 143
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 115 DKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEIN 174
D D + + K F+ D DN+G +S S+ EL +N +Q +I+ D DG+GE++
Sbjct: 2 DADEIKRLGKRFKKLDLDNSGSLSVEEFMSLP-ELQQNPL---VQRVIDIFDTDGNGEVD 57
Query: 175 EEEFLHIMKKTSL 187
+EF+ + + S+
Sbjct: 58 FKEFIEGVSQFSV 70
>pdb|3LL8|B Chain B, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
pdb|3LL8|D Chain D, Crystal Structure Of Calcineurin In Complex With Akap79
Peptide
Length = 155
Score = 54.3 bits (129), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 57/93 (61%), Gaps = 5/93 (5%)
Query: 95 DNSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSV-AVELGENI 153
D +G + +K+F+ V+Q D ++++ AFR++D D G IS L V + +G N+
Sbjct: 50 DGNGEVDFKEFIEGVSQFSVKGDKEQKLRFAFRIYDMDKDGYISNGELFQVLKMMVGNNL 109
Query: 154 ADEEIQEMINE----ADKDGDGEINEEEFLHIM 182
D ++Q+++++ ADKDGDG I+ EEF ++
Sbjct: 110 KDTQLQQIVDKTIINADKDGDGRISFEEFCAVV 142
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 23/73 (31%), Positives = 41/73 (56%), Gaps = 4/73 (5%)
Query: 115 DKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEIN 174
D D + + K F+ D DN+G +S S+ EL +N +Q +I+ D DG+GE++
Sbjct: 1 DADEIKRLGKRFKKLDLDNSGSLSVEEFMSLP-ELQQNPL---VQRVIDIFDTDGNGEVD 56
Query: 175 EEEFLHIMKKTSL 187
+EF+ + + S+
Sbjct: 57 FKEFIEGVSQFSV 69
>pdb|2B1U|A Chain A, Solution Structure Of Calmodulin-Like Skin Protein C
Terminal Domain
Length = 71
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%)
Query: 120 EEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFL 179
E++ AFR FD+D G I+ LR LG+ + EE+ MI EAD D DG +N EEF
Sbjct: 6 EDLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFA 65
Query: 180 HIMKK 184
++ +
Sbjct: 66 RMLAQ 70
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 20/65 (30%), Positives = 31/65 (47%)
Query: 48 DIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLH 107
D+Q AF FD++G G I+ EL+ AM LG D G + Y++F
Sbjct: 7 DLQVAFRAFDQDGDGHITVDELRRAMAGLGQPLPQEELDAMIREADVDQDGRVNYEEFAR 66
Query: 108 LVTQK 112
++ Q+
Sbjct: 67 MLAQE 71
>pdb|2K2A|A Chain A, Solution Structure Of The Apo C Terminal Domain Of
Lethoceru C Isoform F1
Length = 70
Score = 54.3 bits (129), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 25/64 (39%), Positives = 43/64 (67%)
Query: 119 KEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEF 178
++E+ +AFRL+D++ G IS +R + EL E ++ E++ MI+E D DG G ++ EEF
Sbjct: 2 QQELREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEF 61
Query: 179 LHIM 182
+ +M
Sbjct: 62 MGVM 65
Score = 32.3 bits (72), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/62 (29%), Positives = 31/62 (50%)
Query: 49 IQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLHL 108
++EAF L+DKEG G IST ++ + L D SG + +++F+ +
Sbjct: 5 LREAFRLYDKEGNGYISTDVMREILAELDETLSSEDLDAMIDEIDADGSGTVDFEEFMGV 64
Query: 109 VT 110
+T
Sbjct: 65 MT 66
>pdb|2FCE|A Chain A, Solution Structure Of C-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 70
Score = 53.5 bits (127), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 23/61 (37%), Positives = 43/61 (70%)
Query: 120 EEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFL 179
E+ +KAF++FD+++TGK+S +LR + LGE + D E+ E++ + D +GEI+ ++F+
Sbjct: 5 EDFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFI 64
Query: 180 H 180
Sbjct: 65 E 65
Score = 34.7 bits (78), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 19/65 (29%), Positives = 32/65 (49%)
Query: 48 DIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLH 107
D +AF +FDKE TG +S +L+ + LG + D++G + YK F+
Sbjct: 6 DFVKAFQVFDKESTGKVSVGDLRYMLTGLGEKLTDAEVDELLKGVEVDSNGEIDYKKFIE 65
Query: 108 LVTQK 112
V ++
Sbjct: 66 DVLRQ 70
>pdb|1DFK|Y Chain Y, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Y Chain Y, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|W Chain W, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 139
Score = 53.1 bits (126), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
L +Q+ +++EAF++ D + G +S +++K LG P + G L
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPL 56
Query: 101 TYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQE 160
+ FL + + K++ DS+E I AF +FDE T K++ ++ + +G+N +E++
Sbjct: 57 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRM 116
Query: 161 MINEADKDGDGEINEEEFLHIMK 183
EA +G G+ + +F ++K
Sbjct: 117 TFKEAPVEG-GKFDYVKFTAMIK 138
>pdb|1SCM|B Chain B, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 145
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/143 (25%), Positives = 73/143 (51%), Gaps = 5/143 (3%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
L +Q+ +++EAF++ D + G +S +++K LG P + G L
Sbjct: 1 LPQKQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPL 56
Query: 101 TYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQE 160
+ FL + + K++ DS+E I AF +FDE T K++ ++ + +G+N +E++
Sbjct: 57 NFTMFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRM 116
Query: 161 MINEADKDGDGEINEEEFLHIMK 183
EA +G G+ + +F ++K
Sbjct: 117 TFKEAPVEG-GKFDYVKFTAMIK 138
>pdb|1NPQ|A Chain A, Structure Of A Rhodamine-Labeled N-Domain Troponin C
Mutant (Ca2+ Saturated) In Complex With Skeletal
Troponin I 115- 131
Length = 90
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
L+ E +A+ + AF +FD +G G ISTKEL MR LG P D SG +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTI 73
Query: 101 TYKDFLHLVTQKM 113
+++FL ++ ++M
Sbjct: 74 DFEEFLVMMVRQM 86
Score = 46.2 bits (108), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 36/64 (56%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E AF +FD D G IS L +V LG+N E+ +I E D+DG G I+ EEFL
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKCELDAIICEVDEDGSGTIDFEEFLV 80
Query: 181 IMKK 184
+M +
Sbjct: 81 MMVR 84
>pdb|1KK8|B Chain B, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 139
Score = 52.8 bits (125), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 72/140 (51%), Gaps = 5/140 (3%)
Query: 44 EQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYK 103
+Q+ +++EAF++ D + G +S +++K LG P + G L +
Sbjct: 3 KQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFT 58
Query: 104 DFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMIN 163
FL + + K++ DS+E I AF +FDE T K++ ++ + +G+N +E++
Sbjct: 59 MFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFK 118
Query: 164 EADKDGDGEINEEEFLHIMK 183
EA +G G+ + +F ++K
Sbjct: 119 EAPVEG-GKFDYVKFTAMIK 137
>pdb|3HZT|A Chain A, Crystal Structure Of Toxoplasma Gondii Cdpk3,
Tgme49_105860
Length = 467
Score = 52.4 bits (124), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 52/93 (55%), Gaps = 5/93 (5%)
Query: 95 DNSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANL-RSVAVELGENI 153
D +G + Y +F+ + K S+E +L AF+ FD D +GKI+ L R V +
Sbjct: 373 DRNGYIEYSEFVTVCMDKQLLL-SRERLLAAFQQFDSDGSGKITNEELGRLFGVT---EV 428
Query: 154 ADEEIQEMINEADKDGDGEINEEEFLHIMKKTS 186
DE +++ E DK+ DGE++ EEF+ +M+K
Sbjct: 429 DDETWHQVLQECDKNNDGEVDFEEFVEMMQKIC 461
Score = 27.3 bits (59), Expect = 4.9, Method: Compositional matrix adjust.
Identities = 18/80 (22%), Positives = 35/80 (43%), Gaps = 3/80 (3%)
Query: 102 YKDFLHLVTQKMADKDSKE---EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEI 158
Y+ + ++D DS + E+ + D D G I ++ +V ++ ++ E +
Sbjct: 340 YRKLMQWKGDTVSDLDSSQIEAEVDHILQSVDFDRNGYIEYSEFVTVCMDKQLLLSRERL 399
Query: 159 QEMINEADKDGDGEINEEEF 178
+ D DG G+I EE
Sbjct: 400 LAAFQQFDSDGSGKITNEEL 419
>pdb|1AVS|A Chain A, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1AVS|B Chain B, X-Ray Crystallographic Study Of Calcium-Saturated N-
Terminal Domain Of Troponin C
pdb|1BLQ|A Chain A, Structure And Interaction Site Of The Regulatory Domain Of
Troponin-C When Complexed With The 96-148 Region Of
Troponin-I, Nmr, 29 Structures
pdb|1SKT|A Chain A, Solution Structure Of Apo N-Domain Of Troponin C, Nmr, 40
Structures
pdb|1TNP|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1TNQ|A Chain A, Structures Of The Apo And Calcium Troponin-C Regulatory
Domains: The Muscle Contraction Switch
pdb|1ZAC|A Chain A, N-Domain Of Troponin C From Chicken Skeletal Muscle, Nmr,
Minimized Average Structure
Length = 90
Score = 52.4 bits (124), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
L+ E +A+ + AF +FD +G G ISTKEL MR LG P D SG +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 101 TYKDFLHLVTQKM 113
+++FL ++ ++M
Sbjct: 74 DFEEFLVMMVRQM 86
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E AF +FD D G IS L +V LG+N EE+ +I E D+DG G I+ EEFL
Sbjct: 21 EFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 181 IMKK 184
+M +
Sbjct: 81 MMVR 84
>pdb|1TRF|A Chain A, Solution Structure Of The Tr1c Fragment Of Skeletal Muscle
Troponin-C
Length = 76
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
L+ E +A+ + AF +FD +G G ISTKEL MR LG P D SG +
Sbjct: 3 LSEEMIAEFKAAFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 62
Query: 101 TYKDFLHLVTQKM 113
+++FL ++ ++M
Sbjct: 63 DFEEFLVMMVRQM 75
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/60 (45%), Positives = 36/60 (60%)
Query: 125 AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLHIMKK 184
AF +FD D G IS L +V LG+N EE+ +I E D+DG G I+ EEFL +M +
Sbjct: 14 AFDMFDADGGGDISTKELGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLVMMVR 73
>pdb|2W4T|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Y Chain Y, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 136
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/140 (25%), Positives = 72/140 (51%), Gaps = 5/140 (3%)
Query: 44 EQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYK 103
+Q+ +++EAF++ D + G +S +++K LG P + G L +
Sbjct: 1 KQIQEMKEAFSMIDVDRDGFVSKEDIKAISEQLGRAPDDKELTAMLK----EAPGPLNFT 56
Query: 104 DFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMIN 163
FL + + K++ DS+E I AF +FDE T K++ ++ + +G+N +E++
Sbjct: 57 MFLSIFSDKLSGTDSEETIRNAFAMFDEQETKKLNIEYIKDLLENMGDNFNKDEMRMTFK 116
Query: 164 EADKDGDGEINEEEFLHIMK 183
EA +G G+ + +F ++K
Sbjct: 117 EAPVEG-GKFDYVKFTAMIK 135
>pdb|2EC6|B Chain B, Placopecten Striated Muscle Myosin Ii
Length = 133
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 69/138 (50%), Gaps = 5/138 (3%)
Query: 46 VADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDF 105
+ +++EAF + D+ G I +LK +LG P + G L + F
Sbjct: 1 MQEMKEAFTMIDQNRDGFIDINDLKEEFSSLGRTPDDKELTAMLK----EAPGPLNFTMF 56
Query: 106 LHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEA 165
L + + K++ DS+E I AF +FDED T K++ ++ + +G+N +E++ EA
Sbjct: 57 LSIFSDKLSGTDSEETIRNAFGMFDEDATKKLNIEYIKDLLENMGDNFNKDEMRMTFKEA 116
Query: 166 DKDGDGEINEEEFLHIMK 183
+G G+ + F+ ++K
Sbjct: 117 PVEG-GKFDYVRFVAMIK 133
>pdb|3KU2|A Chain A, Crystal Structure Of Inactivated Form Of Cdpk1 From
Toxoplasma Gondii, Tgme49.101440
Length = 507
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Query: 95 DNSGLLTYKDFLHLVTQKMADKD--SKEEILKAFRLFDEDNTGKISFANLRSVAVELGEN 152
D +G + Y +F VT M K S+E + +AFR+FD DN+GKIS L ++ G +
Sbjct: 417 DKNGYIEYSEF---VTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI---FGVS 470
Query: 153 IADEE-IQEMINEADKDGDGEINEEEFLHIMKK 184
D E + +++E DK+ DGE++ +EF ++ K
Sbjct: 471 DVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLK 503
>pdb|3HX4|A Chain A, Crystal Structure Of Cdpk1 Of Toxoplasma Gondii,
Tgme49_101440, In Presence Of Calcium
Length = 508
Score = 52.0 bits (123), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Query: 95 DNSGLLTYKDFLHLVTQKMADKD--SKEEILKAFRLFDEDNTGKISFANLRSVAVELGEN 152
D +G + Y +F VT M K S+E + +AFR+FD DN+GKIS L ++ G +
Sbjct: 418 DKNGYIEYSEF---VTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI---FGVS 471
Query: 153 IADEE-IQEMINEADKDGDGEINEEEFLHIMKK 184
D E + +++E DK+ DGE++ +EF ++ K
Sbjct: 472 DVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLK 504
>pdb|3I79|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1)
pdb|3I7B|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Nm-Pp1
pdb|3N51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor
Rm-1-95
pdb|3SX9|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-132
pdb|3SXF|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-89
pdb|3T3U|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-130
pdb|3T3V|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor,
Rm-1-87
pdb|3UPX|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1300
pdb|3UPZ|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumpless Bki Analog Uw1243
pdb|3V51|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Rm-1-176
pdb|3V5P|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1288
pdb|3V5T|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Inhibitor Uw1299
Length = 484
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Query: 95 DNSGLLTYKDFLHLVTQKMADKD--SKEEILKAFRLFDEDNTGKISFANLRSVAVELGEN 152
D +G + Y +F VT M K S+E + +AFR+FD DN+GKIS L ++ G +
Sbjct: 394 DKNGYIEYSEF---VTVAMDRKTLLSRERLERAFRMFDSDNSGKISSTELATI---FGVS 447
Query: 153 IADEE-IQEMINEADKDGDGEINEEEFLHIMKK 184
D E + +++E DK+ DGE++ +EF ++ K
Sbjct: 448 DVDSETWKSVLSEVDKNNDGEVDFDEFQQMLLK 480
>pdb|3KHE|A Chain A, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
pdb|3KHE|B Chain B, Crystal Structure Of The Calcium-Loaded Calmodulin-Like
Domain Of The Cdpk, 541.M00134 From Toxoplasma Gondii
Length = 191
Score = 51.6 bits (122), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/157 (27%), Positives = 68/157 (43%), Gaps = 16/157 (10%)
Query: 42 TPEQVADIQEAFALFDKEGTGSISTKELKIAMRAL-----------GFEPXXXXXXXXXX 90
T E+ ++ + F D G G + KEL R L
Sbjct: 35 TLEETKELTQIFRQLDNNGDGQLDRKELIEGYRKLMQWKGDTVSDLDSSQIEAEVDHILQ 94
Query: 91 XXXXDNSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANL-RSVAVEL 149
D +G + Y +F+ + K S+E +L AF+ FD D +GKI+ L R V
Sbjct: 95 SVDFDRNGYIEYSEFVTVCMDKQLLL-SRERLLAAFQQFDSDGSGKITNEELGRLFGVT- 152
Query: 150 GENIADEEIQEMINEADKDGDGEINEEEFLHIMKKTS 186
+ DE +++ E DK+ DGE++ EEF+ +M+K
Sbjct: 153 --EVDDETWHQVLQECDKNNDGEVDFEEFVEMMQKIC 187
>pdb|1KK8|C Chain C, Scallop Myosin (S1-Adp-Befx) In The Actin-Detached
Conformation
Length = 154
Score = 50.8 bits (120), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 41 LTPEQVADIQEAFALFD-KEGT-GSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
L+ +++ D+++ F LFD +G G++ +L R LG P
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 62
Query: 99 LLTYKDFLHLVTQKM-ADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEE 157
L +++FL M ++ + + ++AF+ FD + G IS A LR V LGE ++DE+
Sbjct: 63 L-PFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 121
Query: 158 IQEMINEAD--KDGDGEINEEEFL 179
+ E+I D +D +G + E+F+
Sbjct: 122 VDEIIKLTDLQEDLEGNVKYEDFV 145
>pdb|1DFK|Z Chain Z, Nucleotide-Free Scallop Myosin S1-Near Rigor State
pdb|1DFL|Z Chain Z, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
pdb|1DFL|X Chain X, Scallop Myosin S1 Complexed With Mgadp:vanadate-Transition
State
Length = 152
Score = 50.8 bits (120), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 41 LTPEQVADIQEAFALFD-KEGT-GSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
L+ +++ D+++ F LFD +G G++ +L R LG P
Sbjct: 1 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 60
Query: 99 LLTYKDFLHLVTQKM-ADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEE 157
L +++FL M ++ + + ++AF+ FD + G IS A LR V LGE ++DE+
Sbjct: 61 L-PFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 119
Query: 158 IQEMINEAD--KDGDGEINEEEFL 179
+ E+I D +D +G + E+F+
Sbjct: 120 VDEIIKLTDLQEDLEGNVKYEDFV 143
>pdb|1WDC|C Chain C, Scallop Myosin Regulatory Domain
pdb|1B7T|Z Chain Z, Myosin Digested By Papain
pdb|1KK7|Z Chain Z, Scallop Myosin In The Near Rigor Conformation
pdb|1L2O|C Chain C, Scallop Myosin S1-Adp-P-Pdm In The Actin-Detached
Conformation
pdb|1KQM|C Chain C, Scallop Myosin S1-Amppnp In The Actin-Detached
Conformation
pdb|1KWO|C Chain C, Scallop Myosin S1-Atpgammas-P-Pdm In The Actin-Detached
Conformation
pdb|1QVI|Z Chain Z, Crystal Structure Of Scallop Myosin S1 In The Pre-Power
Stroke State To 2.6 Angstrom Resolution: Flexibility And
Function In The Head
pdb|1S5G|Z Chain Z, Structure Of Scallop Myosin S1 Reveals A Novel Nucleotide
Conformation
pdb|1SR6|C Chain C, Structure Of Nucleotide-free Scallop Myosin S1
pdb|3JVT|C Chain C, Calcium-Bound Scallop Myosin Regulatory Domain (Lever Arm)
With Reconstituted Complete Light Chains
Length = 156
Score = 50.4 bits (119), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/144 (27%), Positives = 72/144 (50%), Gaps = 6/144 (4%)
Query: 41 LTPEQVADIQEAFALFD-KEGT-GSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
L+ +++ D+++ F LFD +G G++ +L R LG P
Sbjct: 3 LSQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKS 62
Query: 99 LLTYKDFLHLVTQKM-ADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEE 157
L +++FL M ++ + + ++AF+ FD + G IS A LR V LGE ++DE+
Sbjct: 63 L-PFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDED 121
Query: 158 IQEMINEAD--KDGDGEINEEEFL 179
+ E+I D +D +G + E+F+
Sbjct: 122 VDEIIKLTDLQEDLEGNVKYEDFV 145
>pdb|3TUY|B Chain B, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
pdb|3TUY|E Chain E, Phosphorylated Light Chain Domain Of Scallop Smooth Muscle
Myosin
Length = 161
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Query: 39 FELTPEQVA-DIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNS 97
F P+++ +++EAF + D+ G I +LK +LG P +
Sbjct: 14 FARLPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLK----EAP 69
Query: 98 GLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEE 157
G L + FL + + K++ DS+E I AF +FDE +T K++ ++ + +G+N +E
Sbjct: 70 GPLNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDE 129
Query: 158 IQEMINEADKDGDGEINEEEFLHIMK 183
++ EA +G G+ + F+ ++K
Sbjct: 130 MRMTFKEAPVEG-GKFDYVRFVAMIK 154
>pdb|3PN7|B Chain B, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3PN7|E Chain E, Visualizing New Hinges And A Potential Major Source Of
Compliance In The Lever Arm Of Myosin
pdb|3TS5|B Chain B, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
pdb|3TS5|E Chain E, Crystal Structure Of A Light Chain Domain Of Scallop
Smooth Muscle Myosin
Length = 161
Score = 50.1 bits (118), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 38/146 (26%), Positives = 73/146 (50%), Gaps = 6/146 (4%)
Query: 39 FELTPEQVA-DIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNS 97
F P+++ +++EAF + D+ G I +LK +LG P +
Sbjct: 14 FARLPQKLMQEMKEAFTMIDQNRDGFIDINDLKEMFSSLGRTPDDKELTAMLK----EAP 69
Query: 98 GLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEE 157
G L + FL + + K++ DS+E I AF +FDE +T K++ ++ + +G+N +E
Sbjct: 70 GPLNFTMFLSIFSDKLSGTDSEETIRNAFGMFDELDTKKLNIEYIKDLLENMGDNFNKDE 129
Query: 158 IQEMINEADKDGDGEINEEEFLHIMK 183
++ EA +G G+ + F+ ++K
Sbjct: 130 MRMTFKEAPVEG-GKFDYVRFVAMIK 154
>pdb|1OZS|A Chain A, C-Domain Of Human Cardiac Troponin C In Complex With The
Inhibitory Region Of Human Cardiac Troponin I
Length = 73
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 118 SKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEE 177
S+EE+ FR+FD++ G I L+ + GE I +++I+E++ + DK+ DG I+ +E
Sbjct: 5 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 64
Query: 178 FLHIMK 183
FL MK
Sbjct: 65 FLEFMK 70
Score = 32.0 bits (71), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 42 TPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLT 101
+ E+++D+ F +FDK G I +ELKI ++A G +N G +
Sbjct: 5 SEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 61
Query: 102 YKDFLHLV 109
Y +FL +
Sbjct: 62 YDEFLEFM 69
>pdb|1SMG|A Chain A, Calcium-Bound E41a Mutant Of The N-Domain Of Chicken
Troponin C, Nmr, 40 Structures
Length = 90
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/73 (34%), Positives = 39/73 (53%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
L+ E +A+ + AF +FD +G G ISTK L MR LG P D SG +
Sbjct: 14 LSEEMIAEFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTI 73
Query: 101 TYKDFLHLVTQKM 113
+++FL ++ ++M
Sbjct: 74 DFEEFLVMMVRQM 86
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 28/64 (43%), Positives = 37/64 (57%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E AF +FD D G IS L +V LG+N EE+ +I E D+DG G I+ EEFL
Sbjct: 21 EFKAAFDMFDADGGGDISTKALGTVMRMLGQNPTKEELDAIIEEVDEDGSGTIDFEEFLV 80
Query: 181 IMKK 184
+M +
Sbjct: 81 MMVR 84
>pdb|1IH0|A Chain A, Structure Of The C-Domain Of Human Cardiac Troponin C In
Complex With Ca2+ Sensitizer Emd 57033
Length = 71
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 118 SKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEE 177
S+EE+ FR+FD++ G I L+ + GE I +++I+E++ + DK+ DG I+ +E
Sbjct: 3 SEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 62
Query: 178 FLHIMK 183
FL MK
Sbjct: 63 FLEFMK 68
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 42 TPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLT 101
+ E+++D+ F +FDK G I +ELKI ++A G +N G +
Sbjct: 3 SEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 59
Query: 102 YKDFLHLV 109
Y +FL +
Sbjct: 60 YDEFLEFM 67
>pdb|2KDH|A Chain A, The Solution Structure Of Human Cardiac Troponin C In
Complex With The Green Tea Polyphenol; (-)-
Epigallocatechin-3-Gallate
pdb|2L98|A Chain A, Structure Of Trans-Resveratrol In Complex With The Cardiac
Regulatory Protein Troponin C
Length = 72
Score = 50.1 bits (118), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 25/66 (37%), Positives = 42/66 (63%)
Query: 118 SKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEE 177
S+EE+ FR+FD++ G I L+ + GE I +++I+E++ + DK+ DG I+ +E
Sbjct: 4 SEEELSDLFRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 63
Query: 178 FLHIMK 183
FL MK
Sbjct: 64 FLEFMK 69
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 19/68 (27%), Positives = 31/68 (45%), Gaps = 3/68 (4%)
Query: 42 TPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLT 101
+ E+++D+ F +FDK G I ELKI ++A G +N G +
Sbjct: 4 SEEELSDL---FRMFDKNADGYIDLDELKIMLQATGETITEDDIEELMKDGDKNNDGRID 60
Query: 102 YKDFLHLV 109
Y +FL +
Sbjct: 61 YDEFLEFM 68
>pdb|2LC5|A Chain A, Calmodulin-Like Protein From Entamoeba Histolytica:
Solution Structure And Calcium-Binding Properties Of A
Partially Folded Protein
Length = 85
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%)
Query: 111 QKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
+K+ + ++E +AF+LFD+DN K++ L +V LG N ++I E++ + DKD
Sbjct: 5 KKVLTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNS 64
Query: 171 GEINEEEFLHIM 182
G+ ++E FL IM
Sbjct: 65 GKFDQETFLTIM 76
Score = 44.3 bits (103), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/78 (33%), Positives = 38/78 (48%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
LT E+ + +EAF LFDK+ ++ +EL MRALG P DNSG
Sbjct: 8 LTAEEQQEYKEAFQLFDKDNDNKLTAEELGTVMRALGANPTKQKISEIVKDYDKDNSGKF 67
Query: 101 TYKDFLHLVTQKMADKDS 118
+ FL ++ + + DS
Sbjct: 68 DQETFLTIMLEYGQEVDS 85
>pdb|3K21|A Chain A, Crystal Structure Of Carboxy-Terminus Of Pfc0420w
Length = 191
Score = 49.7 bits (117), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/143 (28%), Positives = 70/143 (48%), Gaps = 8/143 (5%)
Query: 46 VADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDF 105
V ++ F + D++G G I+ ++LK + G + D SG + Y +F
Sbjct: 51 VEKLKSTFLVLDEDGKGYITKEQLKKGLEKDGLKLPYNFDLLLDQIDS-DGSGKIDYTEF 109
Query: 106 LHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGE--NIADEE---IQE 160
+ + + SK+ I AFR+FD DN G+I+ A L + + NI + ++
Sbjct: 110 IAAALDR--KQLSKKLIYCAFRVFDVDNDGEITTAELAHILYNGNKKGNITQRDVNRVKR 167
Query: 161 MINEADKDGDGEINEEEFLHIMK 183
MI + DK+ DG+I+ EF +MK
Sbjct: 168 MIRDVDKNNDGKIDFHEFSEMMK 190
>pdb|1FI5|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I.
pdb|1SBJ|A Chain A, Nmr Structure Of The Mg2+-Loaded C Terminal Domain Of
Cardiac Troponin C Bound To The N Terminal Domain Of
Cardiac Troponin I
pdb|1SCV|A Chain A, Nmr Structure Of The C Terminal Domain Of Cardiac Troponin
C Bound To The N Terminal Domain Of Cardiac Troponin I
Length = 81
Score = 49.3 bits (116), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 118 SKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEE 177
++EE+ FR+FD++ G I L+ + GE I +++I+E++ + DK+ DG I+ +E
Sbjct: 13 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 72
Query: 178 FLHIMK 183
FL MK
Sbjct: 73 FLEFMK 78
Score = 33.9 bits (76), Expect = 0.051, Method: Compositional matrix adjust.
Identities = 24/82 (29%), Positives = 36/82 (43%), Gaps = 6/82 (7%)
Query: 28 AAPMKKPSGPKFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXX 87
MK S K T E+++D+ F +FDK G I +ELKI ++A G
Sbjct: 2 VRCMKDDSKGK---TEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEE 55
Query: 88 XXXXXXXDNSGLLTYKDFLHLV 109
+N G + Y +FL +
Sbjct: 56 LMKDGDKNNDGRIDYDEFLEFM 77
>pdb|3CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 76
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 24/66 (36%), Positives = 42/66 (63%)
Query: 118 SKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEE 177
++EE+ FR+FD++ G I L+ + GE I +++I+E++ + DK+ DG I+ +E
Sbjct: 8 TEEELSDLFRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRIDYDE 67
Query: 178 FLHIMK 183
FL MK
Sbjct: 68 FLEFMK 73
Score = 33.5 bits (75), Expect = 0.068, Method: Compositional matrix adjust.
Identities = 20/68 (29%), Positives = 32/68 (47%), Gaps = 3/68 (4%)
Query: 42 TPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLT 101
T E+++D+ F +FDK G I +ELKI ++A G +N G +
Sbjct: 8 TEEELSDL---FRMFDKNADGYIDLEELKIMLQATGETITEDDIEELMKDGDKNNDGRID 64
Query: 102 YKDFLHLV 109
Y +FL +
Sbjct: 65 YDEFLEFM 72
>pdb|3TZ1|A Chain A, Crystal Structure Of The Ca2+-saturated C-terminal Domain
Of Akazara Scallop Troponin C In Complex With A Troponin
I Fragment
Length = 74
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 42/70 (60%), Gaps = 1/70 (1%)
Query: 113 MADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGE 172
M D D +E + +AFR+ D++ G I LR + LG+ + ++EI+ MI E D DG G
Sbjct: 1 MEDLDERE-LKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGT 59
Query: 173 INEEEFLHIM 182
++ EEF +M
Sbjct: 60 VDYEEFKCLM 69
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/61 (29%), Positives = 29/61 (47%)
Query: 49 IQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLHL 108
++EAF + DKE G I L+ +++LG E D SG + Y++F L
Sbjct: 9 LKEAFRVLDKEKKGVIKVDVLRWILKSLGDELTEDEIENMIAETDTDGSGTVDYEEFKCL 68
Query: 109 V 109
+
Sbjct: 69 M 69
>pdb|2W4T|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4V|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
pdb|2W4W|Z Chain Z, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
Length = 151
Score = 48.9 bits (115), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 6/143 (4%)
Query: 42 TPEQVADIQEAFALFD-KEGT-GSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+ +++ D+++ F LFD +G G++ +L R LG P L
Sbjct: 1 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSL 60
Query: 100 LTYKDFLHLVTQKM-ADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEI 158
+++FL M ++ + + ++AF+ FD + G IS A LR V LGE ++DE++
Sbjct: 61 -PFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDV 119
Query: 159 QEMINEAD--KDGDGEINEEEFL 179
E+I D +D +G + E+F+
Sbjct: 120 DEIIKLTDLQEDLEGNVKYEDFV 142
>pdb|3H4S|E Chain E, Structure Of The Complex Of A Mitotic Kinesin With Its
Calcium Binding Regulator
Length = 135
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 29/86 (33%), Positives = 48/86 (55%), Gaps = 1/86 (1%)
Query: 102 YKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELG-ENIADEEIQE 160
Y+D L ++ +KM ++ E+ K F L + I+ +LR + LG E ++ E+ Q
Sbjct: 22 YEDMLPVMAEKMDVEEFVSELCKGFSLLADPERHLITAESLRRNSGILGIEGMSKEDAQG 81
Query: 161 MINEADKDGDGEINEEEFLHIMKKTS 186
M+ E D DGDG +N+ EF +M + S
Sbjct: 82 MVREGDLDGDGALNQTEFCVLMVRLS 107
>pdb|3IGO|A Chain A, Crystal Structure Of Cryptosporidium Parvum Cdpk1,
Cgd3_920
pdb|3MWU|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Rm-1-95
pdb|3NCG|A Chain A, Activated Calcium-Dependent Protein Kinase 1 From
Cryptosporidium Parvum (Cpcdpk1) In Complex With Bumped
Kinase Inhibitor Nm-Pp1
Length = 486
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/89 (30%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 95 DNSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIA 154
D SG + Y +F+ + S+E + +AF++FD+D +GKIS L + + +I
Sbjct: 393 DGSGSIEYSEFIASAIDRTILL-SRERMERAFKMFDKDGSGKISTKELFKLFSQADSSIQ 451
Query: 155 DEEIQEMINEADKDGDGEINEEEFLHIMK 183
EE++ +I + D + DGE++ EF+ +++
Sbjct: 452 MEELESIIEQVDNNKDGEVDFNEFVEMLQ 480
Score = 32.7 bits (73), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 13/21 (61%), Positives = 18/21 (85%)
Query: 49 IQEAFALFDKEGTGSISTKEL 69
++ AF +FDK+G+G ISTKEL
Sbjct: 419 MERAFKMFDKDGSGKISTKEL 439
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 29/57 (50%)
Query: 128 LFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLHIMKK 184
L D D +G I ++ + A++ ++ E ++ DKDG G+I+ +E + +
Sbjct: 389 LLDMDGSGSIEYSEFIASAIDRTILLSRERMERAFKMFDKDGSGKISTKELFKLFSQ 445
>pdb|1SCM|C Chain C, Structure Of The Regulatory Domain Of Scallop Myosin At
2.8 Angstroms Resolution
Length = 149
Score = 48.5 bits (114), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 39/143 (27%), Positives = 71/143 (49%), Gaps = 6/143 (4%)
Query: 42 TPEQVADIQEAFALFD-KEGT-GSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGL 99
+ +++ D+++ F LFD +G G++ +L R LG P L
Sbjct: 1 SQDEIDDLKDVFELFDFWDGRDGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSL 60
Query: 100 LTYKDFLHLVTQKM-ADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEI 158
+++FL M ++ + + ++AF+ FD + G IS A LR V LGE ++DE++
Sbjct: 61 -PFEEFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDV 119
Query: 159 QEMINEAD--KDGDGEINEEEFL 179
E+I D +D +G + E+F+
Sbjct: 120 DEIIKLTDLQEDLEGNVKYEDFV 142
>pdb|3JTD|C Chain C, Calcium-Free Scallop Myosin Regulatory Domain With
Elc-D19a Point Mutation
Length = 156
Score = 48.1 bits (113), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/139 (27%), Positives = 66/139 (47%), Gaps = 5/139 (3%)
Query: 44 EQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYK 103
+ + D+ E FA +D G++ +L R LG P L ++
Sbjct: 9 DDLKDVFELFAFWDGR-DGAVDAFKLGDVCRCLGINPRNEDVFAVGGTHKMGEKSL-PFE 66
Query: 104 DFLHLVTQKM-ADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMI 162
+FL M ++ + + ++AF+ FD + G IS A LR V LGE ++DE++ E+I
Sbjct: 67 EFLPAYEGLMDCEQGTFADYMEAFKTFDREGQGFISGAELRHVLTALGERLSDEDVDEII 126
Query: 163 NEAD--KDGDGEINEEEFL 179
D +D +G + E+F+
Sbjct: 127 KLTDLQEDLEGNVKYEDFV 145
>pdb|3I7C|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Bumped Kinase Inhibitor Na-Pp2
pdb|3NYV|A Chain A, Calcium-Dependent Protein Kinase 1 From Toxoplasma Gondii
(Tgcdpk1) In Complex With Non-Specific Inhibitor
Whi-P180
Length = 484
Score = 47.8 bits (112), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 52/91 (57%), Gaps = 5/91 (5%)
Query: 95 DNSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIA 154
D +G + Y +F+ + + S+E + +AFR FD DN+GKIS L ++ G +
Sbjct: 394 DKNGYIEYSEFVTVAXDRKTLL-SRERLERAFRXFDSDNSGKISSTELATI---FGVSDV 449
Query: 155 DEE-IQEMINEADKDGDGEINEEEFLHIMKK 184
D E + +++E DK+ DGE++ +EF + K
Sbjct: 450 DSETWKSVLSEVDKNNDGEVDFDEFQQXLLK 480
>pdb|3I5G|C Chain C, Crystal Structure Of Rigor-Like Squid Myosin S1
pdb|3I5H|C Chain C, The Crystal Structure Of Rigor Like Squid Myosin S1 In The
Absence Of Nucleotide
pdb|3I5I|C Chain C, The Crystal Structure Of Squid Myosin S1 In The Presence
Of So4 2-
pdb|3I5F|C Chain C, Crystal Structure Of Squid Mg.Adp Myosin S1
Length = 159
Score = 47.8 bits (112), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 77/154 (50%), Gaps = 14/154 (9%)
Query: 40 ELTPEQVADIQEAFALFD-KEGT-GSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNS 97
+LT +++ +++E F LFD +G G + ++ +R LG P
Sbjct: 2 QLTKDEIEEVREVFDLFDFWDGRDGDVDAAKVGDLLRCLGMNPTEAQVHQHGGTK---KM 58
Query: 98 GLLTYK-DFLHLVTQKMADKDS---KEEILKAFRLFDEDNTGKISFANLRSVAVELGENI 153
G YK + + + ++M+ KD+ +E ++AF+ FD + G IS A +R+V LGE I
Sbjct: 59 GEKAYKLEEILPIYEEMSSKDTGTAADEFMEAFKTFDREGQGLISSAEIRNVLKMLGERI 118
Query: 154 ADEEIQEMINEAD--KDGDGEINEEEFLHIMKKT 185
+++ ++ D +D DG I E+ +MKK
Sbjct: 119 TEDQCNDIFTFCDIREDIDGNIKYED---LMKKV 149
>pdb|2LV7|A Chain A, Solution Structure Of Ca2+-Bound Cabp7 N-Terminal Doman
Length = 100
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 22/66 (33%), Positives = 39/66 (59%)
Query: 44 EQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYK 103
+++ +I+EAF +FD++G G IS +EL AMR+LG+ P D G + ++
Sbjct: 33 DELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDFE 92
Query: 104 DFLHLV 109
+F+ L+
Sbjct: 93 EFVTLL 98
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 25/67 (37%), Positives = 40/67 (59%)
Query: 116 KDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINE 175
+D EEI +AF++FD D G IS L + LG + E++ +I D DGDG+++
Sbjct: 32 EDELEEIREAFKVFDRDGNGFISKQELGTAMRSLGYMPNEVELEVIIQRLDMDGDGQVDF 91
Query: 176 EEFLHIM 182
EEF+ ++
Sbjct: 92 EEFVTLL 98
>pdb|1JC2|A Chain A, Complex Of The C-Domain Of Troponin C With Residues 1-40
Of Troponin I
Length = 76
Score = 47.0 bits (110), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 23/66 (34%), Positives = 44/66 (66%)
Query: 118 SKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEE 177
S+EE+ FR+FD++ G I L + GE++ +E+I++++ ++DK+ DG I+ +E
Sbjct: 8 SEEELANCFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDE 67
Query: 178 FLHIMK 183
FL +M+
Sbjct: 68 FLKMME 73
Score = 27.3 bits (59), Expect = 5.3, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 24/58 (41%)
Query: 52 AFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLHLV 109
F +FDK G I +EL +RA G +N G + + +FL ++
Sbjct: 15 CFRIFDKNADGFIDIEELGEILRATGEHVIEEDIEDLMKDSDKNNDGRIDFDEFLKMM 72
>pdb|1R2U|A Chain A, Nmr Structure Of The N Domain Of Trout Cardiac Troponin C
At 30 C
pdb|1R6P|A Chain A, Nmr Structure Of The N-Terminal Domain Of Trout Cardiac
Troponin C At 7 C
Length = 89
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 31/83 (37%), Positives = 46/83 (55%), Gaps = 2/83 (2%)
Query: 104 DFLHLVTQKMADKDSKEEILKAFRLFDED-NTGKISFANLRSVAVELGENIADEEIQEMI 162
D +++ D+ K E AF +F +D G IS L V LG+N EE+QEMI
Sbjct: 3 DIYKAAVEQLTDE-QKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMI 61
Query: 163 NEADKDGDGEINEEEFLHIMKKT 185
+E D+DG G ++ +EFL +M +
Sbjct: 62 DEVDEDGSGTVDFDEFLVMMVRC 84
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 40 ELTPEQVADIQEAFALFDKEG-TGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
+LT EQ + + AF +F ++ G ISTKEL MR LG P D SG
Sbjct: 11 QLTDEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 99 LLTYKDFLHLVTQKMAD 115
+ + +FL ++ + M D
Sbjct: 71 TVDFDEFLVMMVRCMKD 87
>pdb|2K7C|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 C-Domain
pdb|2K7D|A Chain A, Nmr Structure Of Ca2+-Bound Cabp1 C-Domain
Length = 72
Score = 47.0 bits (110), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 43/72 (59%), Gaps = 1/72 (1%)
Query: 114 ADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVEL-GENIADEEIQEMINEADKDGDGE 172
AD +E+ AFR FD + G+IS + LR +L G + +I+E+I + D +GDG
Sbjct: 1 ADMIGVKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGR 60
Query: 173 INEEEFLHIMKK 184
++ EEF+ +M +
Sbjct: 61 VDFEEFVRMMSR 72
Score = 33.5 bits (75), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 19/67 (28%), Positives = 35/67 (52%), Gaps = 1/67 (1%)
Query: 46 VADIQEAFALFDKEGTGSISTKELKIAMRA-LGFEPXXXXXXXXXXXXXXDNSGLLTYKD 104
V ++++AF FD G G IST EL+ AMR LG + + G + +++
Sbjct: 6 VKELRDAFREFDTNGDGEISTSELREAMRKLLGHQVGHRDIEEIIRDVDLNGDGRVDFEE 65
Query: 105 FLHLVTQ 111
F+ ++++
Sbjct: 66 FVRMMSR 72
>pdb|4GJG|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant D2n/v28i/l29q/g30d (niqd) In
Complex With Cadmium
Length = 89
Score = 46.6 bits (109), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 42/71 (59%), Gaps = 1/71 (1%)
Query: 116 KDSKEEILKAFRLFDED-NTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEIN 174
++ K E AF +F +D G IS L V LG+N EE+QEMI+E D+DG G ++
Sbjct: 14 EEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 175 EEEFLHIMKKT 185
+EFL +M +
Sbjct: 74 FDEFLVMMVRC 84
Score = 41.2 bits (95), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 1/77 (1%)
Query: 40 ELTPEQVADIQEAFALFDKEG-TGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
+LT EQ + + AF +F ++ G ISTKEL MR LG P D SG
Sbjct: 11 QLTEEQKNEFKAAFDIFIQDAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 99 LLTYKDFLHLVTQKMAD 115
+ + +FL ++ + M D
Sbjct: 71 TVDFDEFLVMMVRCMKD 87
>pdb|1QX2|A Chain A, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
pdb|1QX2|B Chain B, X-Ray Structure Of Calcium-Loaded Calbindomodulin (A
Calbindin D9k Re- Engineered To Undergo A Conformational
Opening) At 1.44 A Resolution
Length = 76
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 43/73 (58%), Gaps = 4/73 (5%)
Query: 118 SKEEILKAFRLF--DEDNTGKISFANLRSVAVELGENIAD--EEIQEMINEADKDGDGEI 173
S EEI AF +F E + +IS L+ V LG ++ + EMI E DK+GDGE+
Sbjct: 3 SPEEIKGAFEVFAAKEGDPNQISKEELKLVMQTLGPSLLKGMSTLDEMIEEVDKNGDGEV 62
Query: 174 NEEEFLHIMKKTS 186
+ EEFL +MKK S
Sbjct: 63 SFEEFLVMMKKIS 75
>pdb|3LIJ|A Chain A, Crystal Structure Of Full Length Cpcdpk3 (Cgd5_820) In
Complex With Ca2+ And Amppnp
Length = 494
Score = 45.8 bits (107), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/156 (27%), Positives = 71/156 (45%), Gaps = 17/156 (10%)
Query: 42 TPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXX--------XXXXXXXXXXX 93
+ E+ ++ + F DK G G + +EL L E
Sbjct: 341 SQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAAD 400
Query: 94 XDNSGLLTYKDFLHLVTQKMADKD--SKEEILKAFRLFDEDNTGKISFANLRSVAVELG- 150
D +G + Y +F VT M K SK+++ AF+ FD+D GKIS L SV G
Sbjct: 401 FDRNGYIDYSEF---VTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV---FGL 454
Query: 151 ENIADEEIQEMINEADKDGDGEINEEEFLHIMKKTS 186
+++ + +EMI+ D + DG+++ EEF +++K
Sbjct: 455 DHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQKLC 490
Score = 27.7 bits (60), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 133 NTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLHIMKKTS 186
N+ K++ A L +A +L +E+ ++ DK+GDG+++ +E + K S
Sbjct: 323 NSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLS 376
>pdb|3L19|A Chain A, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
pdb|3L19|B Chain B, Crystal Structure Of Calcium Binding Domain Of Cpcdpk3,
Cgd5_820
Length = 214
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 43/154 (27%), Positives = 71/154 (46%), Gaps = 17/154 (11%)
Query: 42 TPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXX--------XXXXXXXXXXX 93
+ E+ ++ + F DK G G + +EL L E
Sbjct: 58 SQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLSGEEVAVFDLPQIESEVDAILGAAD 117
Query: 94 XDNSGLLTYKDFLHLVTQKMADKD--SKEEILKAFRLFDEDNTGKISFANLRSVAVELG- 150
D +G + Y +F VT M K SK+++ AF+ FD+D GKIS L SV G
Sbjct: 118 FDRNGYIDYSEF---VTVAMDRKSLLSKDKLESAFQKFDQDGNGKISVDELASV---FGL 171
Query: 151 ENIADEEIQEMINEADKDGDGEINEEEFLHIMKK 184
+++ + +EMI+ D + DG+++ EEF +++K
Sbjct: 172 DHLESKTWKEMISGIDSNNDGDVDFEEFCKMIQK 205
Score = 26.9 bits (58), Expect = 6.1, Method: Compositional matrix adjust.
Identities = 15/54 (27%), Positives = 30/54 (55%)
Query: 133 NTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLHIMKKTS 186
N+ K++ A L +A +L +E+ ++ DK+GDG+++ +E + K S
Sbjct: 40 NSQKLAQAALLYMASKLTSQEETKELTDIFRHIDKNGDGQLDRQELIDGYSKLS 93
>pdb|2QAC|A Chain A, The Closed Mtip-myosina-tail Complex From The Malaria
Parasite Invasion Machinery
pdb|4AOM|A Chain A, Mtip And Myoa Complex
Length = 146
Score = 45.4 bits (106), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/130 (27%), Positives = 58/130 (44%), Gaps = 14/130 (10%)
Query: 44 EQVADIQEAFALFD----------KEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXX 93
E VADIQ+ D K G IS R LG P
Sbjct: 2 ESVADIQQLEEKVDESDVRIYFNEKSSGGKISIDNASYNARKLGLAPSSIDEKKIKELYG 61
Query: 94 XDNSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENI 153
DN LTY+ +L ++ + DKD+ EE++K F FD + TG ++ + ++++ G+ +
Sbjct: 62 -DN---LTYEQYLEYLSICVHDKDNVEELIKMFAHFDNNCTGYLTKSQMKNILTTWGDAL 117
Query: 154 ADEEIQEMIN 163
D+E + +N
Sbjct: 118 TDQEAIDALN 127
>pdb|3Q5I|A Chain A, Crystal Structure Of Pbanka_031420
Length = 504
Score = 45.1 bits (105), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 40/156 (25%), Positives = 70/156 (44%), Gaps = 17/156 (10%)
Query: 42 TPEQVADIQEAFALFDKEGTGSISTKELKIAMRALG--------FEPXXXXXXXXXXXXX 93
T E+ ++ + F DK G G + KEL L +
Sbjct: 350 TLEERKELTDIFKKLDKNGDGQLDKKELIEGYNVLRNFKNELGELKNVEEEVDNILKEVD 409
Query: 94 XDNSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKIS---FANLRSVAVELG 150
D +G + Y +F+ + K S+E + +AF LFD D +GKI+ ANL +
Sbjct: 410 FDKNGYIEYSEFISVCMDKQI-LFSEERLRRAFNLFDTDKSGKITKEELANLFGLT---- 464
Query: 151 ENIADEEIQEMINEADKDGDGEINEEEFLHIMKKTS 186
+I+++ +++ EAD++ D I+ +EF+ +M K
Sbjct: 465 -SISEKTWNDVLGEADQNKDNMIDFDEFVSMMHKIC 499
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 19/72 (26%), Positives = 36/72 (50%)
Query: 116 KDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINE 175
K+ +EE+ + D D G I ++ SV ++ ++E ++ N D D G+I +
Sbjct: 395 KNVEEEVDNILKEVDFDKNGYIEYSEFISVCMDKQILFSEERLRRAFNLFDTDKSGKITK 454
Query: 176 EEFLHIMKKTSL 187
EE ++ TS+
Sbjct: 455 EELANLFGLTSI 466
>pdb|2K7B|A Chain A, Nmr Structure Of Mg2+-Bound Cabp1 N-Domain
Length = 76
Score = 44.7 bits (104), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 38/73 (52%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
L PE++ +++EAF FDK+ G I+ ++L MR +G+ P + G +
Sbjct: 4 LRPEEIEELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHV 63
Query: 101 TYKDFLHLVTQKM 113
+ DF+ L+ K+
Sbjct: 64 DFDDFVELMGPKL 76
Score = 30.8 bits (68), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 17/63 (26%), Positives = 36/63 (57%)
Query: 120 EEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFL 179
EE+ +AFR FD+D G I+ +L + +G + E+ E+ + + + G ++ ++F+
Sbjct: 10 EELREAFREFDKDKDGYINCRDLGNCMRTMGYMPTEMELIELSQQINMNLGGHVDFDDFV 69
Query: 180 HIM 182
+M
Sbjct: 70 ELM 72
>pdb|4GJF|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C Mutant L29q In Complex With Cadmium
Length = 89
Score = 44.3 bits (103), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 41/71 (57%), Gaps = 1/71 (1%)
Query: 116 KDSKEEILKAFRLFDED-NTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEIN 174
++ K E AF +F + G IS L V LG+N EE+QEMI+E D+DG G ++
Sbjct: 14 EEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGTVD 73
Query: 175 EEEFLHIMKKT 185
+EFL +M +
Sbjct: 74 FDEFLVMMVRC 84
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 40 ELTPEQVADIQEAFALFDKEG-TGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
+LT EQ + + AF +F + G ISTKEL MR LG P D SG
Sbjct: 11 QLTEEQKNEFKAAFDIFVQGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 99 LLTYKDFLHLVTQKMAD 115
+ + +FL ++ + M D
Sbjct: 71 TVDFDEFLVMMVRCMKD 87
>pdb|2CTN|A Chain A, Structure Of Calcium-Saturated Cardiac Troponin C, Nmr, 30
Structures
Length = 89
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 116 KDSKEEILKAFRLF---DEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGE 172
++ K E AF +F ED G IS L V LG+N EE+QEMI+E D+DG G
Sbjct: 14 EEQKNEFKAAFDIFVLGAED--GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 173 INEEEFLHIMKKT 185
++ +EFL +M ++
Sbjct: 72 VDFDEFLVMMVRS 84
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 40 ELTPEQVADIQEAFALFDKEG-TGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
+LT EQ + + AF +F GSISTKEL MR LG P D SG
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 99 LLTYKDFLHLVTQKMAD 115
+ + +FL ++ + M D
Sbjct: 71 TVDFDEFLVMMVRSMKD 87
>pdb|2KFX|T Chain T, Structure Of The N-Terminal Domain Of Human Cardiac
Troponin C Bound To Calcium Ion And To The Inhibitor W7
Length = 89
Score = 43.9 bits (102), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 116 KDSKEEILKAFRLF---DEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGE 172
++ K E AF +F ED G IS L V LG+N EE+QEMI+E D+DG G
Sbjct: 14 EEQKNEFKAAFDIFVLGAED--GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 173 INEEEFLHIMKKT 185
++ +EFL +M ++
Sbjct: 72 VDFDEFLVMMVRS 84
Score = 39.7 bits (91), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 40 ELTPEQVADIQEAFALFDKEG-TGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
+LT EQ + + AF +F GSISTKEL MR LG P D SG
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 99 LLTYKDFLHLVTQKMAD 115
+ + +FL ++ + M D
Sbjct: 71 TVDFDEFLVMMVRSMKD 87
>pdb|1WRK|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRK|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Orthrombic Crystal Form)
pdb|1WRL|A Chain A, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|B Chain B, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|C Chain C, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|D Chain D, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|E Chain E, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
pdb|1WRL|F Chain F, Crystal Structure Of The N-Terminal Domain Of Human
Cardiac Troponin C In Complex With Trifluoperazine
(Monoclinic Crystal Form)
Length = 88
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 5/73 (6%)
Query: 116 KDSKEEILKAFRLF---DEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGE 172
++ K E AF +F ED G IS L V LG+N EE+QEMI+E D+DG G
Sbjct: 14 EEQKNEFKAAFDIFVLGAED--GSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 173 INEEEFLHIMKKT 185
++ +EFL +M ++
Sbjct: 72 VDFDEFLVMMVRS 84
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/77 (35%), Positives = 37/77 (48%), Gaps = 1/77 (1%)
Query: 40 ELTPEQVADIQEAFALFDKEG-TGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
+LT EQ + + AF +F GSISTKEL MR LG P D SG
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGSISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 99 LLTYKDFLHLVTQKMAD 115
+ + +FL ++ + M D
Sbjct: 71 TVDFDEFLVMMVRSMKD 87
>pdb|2MYS|B Chain B, Myosin Subfragment-1, Alpha Carbon Coordinates Only For
The Two Light Chains
pdb|1I84|U Chain U, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment.
pdb|1I84|Z Chain Z, Cryo-Em Structure Of The Heavy Meromyosin Subfragment Of
Chicken Gizzard Smooth Muscle Myosin With Regulatory
Light Chain In The Dephosphorylated State. Only C Alphas
Provided For Regulatory Light Chain. Only Backbone Atoms
Provided For S2 Fragment
Length = 166
Score = 43.5 bits (101), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 3/138 (2%)
Query: 45 QVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKD 104
++ D +EAF + D+ G I +L+ A+G + SG + +
Sbjct: 23 EIEDFKEAFTVIDQNADGIIDKDDLRETFAAMG---RLNVKNEELDAMIKEASGPINFTV 79
Query: 105 FLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINE 164
FL + +K+ D ++ I+ AF++ D D G I + L + G EEI+ M
Sbjct: 80 FLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAA 139
Query: 165 ADKDGDGEINEEEFLHIM 182
D G ++ + +++
Sbjct: 140 FPPDVAGNVDYKNICYVI 157
>pdb|1MXL|C Chain C, Structure Of Cardiac Troponin C-troponin I Complex
pdb|1LXF|C Chain C, Structure Of The Regulatory N-Domain Of Human Cardiac
Troponin C In Complex With Human Cardiac Troponin-I(147-
163) And Bepridil
pdb|1AP4|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Saturated State, Nmr, 40 Structures
pdb|1SPY|A Chain A, Regulatory Domain Of Human Cardiac Troponin C In The
Calcium-Free State, Nmr, 40 Structures
pdb|2KRD|C Chain C, Solution Structure Of The Regulatory Domain Of Human
Cardiac C In Complex With The Switch Region Of Cardiac
Troponin I A
pdb|2L1R|A Chain A, The Structure Of The Calcium-Sensitizer, Dfbp-O, In
Complex With The N-Domain Of Troponin C And The Switch
Region Of Troponin I
pdb|3SD6|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.4
Resolution.
pdb|3SWB|A Chain A, Crystal Structure Of The Amino-terminal Domain Of Human
Cardiac Troponin C In Complex With Cadmium At 1.7 A
Resolution
pdb|4GJE|A Chain A, Crystal Structure Of The Refolded Amino-terminal Domain Of
Human Cardiac Troponin C In Complex With Cadmium
Length = 89
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 116 KDSKEEILKAFRLF---DEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGE 172
++ K E AF +F ED G IS L V LG+N EE+QEMI+E D+DG G
Sbjct: 14 EEQKNEFKAAFDIFVLGAED--GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 173 INEEEFLHIMKKT 185
++ +EFL +M +
Sbjct: 72 VDFDEFLVMMVRC 84
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/77 (33%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 40 ELTPEQVADIQEAFALFDKEG-TGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
+LT EQ + + AF +F G ISTKEL MR LG P D SG
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 99 LLTYKDFLHLVTQKMAD 115
+ + +FL ++ + M D
Sbjct: 71 TVDFDEFLVMMVRCMKD 87
>pdb|2W4A|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle
pdb|2W4G|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Stretch Step
pdb|2W4H|B Chain B, Isometrically Contracting Insect Asynchronous Flight
Muscle Quick Frozen After A Quick Release Step
Length = 150
Score = 43.5 bits (101), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 3/138 (2%)
Query: 45 QVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKD 104
Q+ D +EAF + D+ G I +L+ A+G + SG + +
Sbjct: 10 QIQDFKEAFTVIDQNRDGIIDKDDLRETFAAMG---RLNVKNEELDAMIKEASGPINFTV 66
Query: 105 FLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINE 164
FL + +K+ D ++ I+ AF++ D D G I + L + + EEI+ M
Sbjct: 67 FLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTQCDRFTPEEIKNMWAA 126
Query: 165 ADKDGDGEINEEEFLHIM 182
D G ++ + +++
Sbjct: 127 FPPDVAGNVDYKNICYVI 144
>pdb|1M8Q|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1M8Q|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1MVW|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O18|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O19|T Chain T, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1A|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1B|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1C|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1D|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1E|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1F|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|B Chain B, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|E Chain E, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|H Chain H, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|K Chain K, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|N Chain N, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
pdb|1O1G|Q Chain Q, Molecular Models Of Averaged Rigor Crossbridges From
Tomograms Of Insect Flight Muscle
Length = 145
Score = 43.1 bits (100), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/138 (22%), Positives = 59/138 (42%), Gaps = 3/138 (2%)
Query: 45 QVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKD 104
++ D +EAF + D+ G I +L+ A+G + SG + +
Sbjct: 5 EIEDFKEAFTVIDQNADGIIDKDDLRETFAAMG---RLNVKNEELDAMIKEASGPINFTV 61
Query: 105 FLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINE 164
FL + +K+ D ++ I+ AF++ D D G I + L + G EEI+ M
Sbjct: 62 FLTMFGEKLKGADPEDVIMGAFKVLDPDGKGSIKKSFLEELLTTGGGRFTPEEIKNMWAA 121
Query: 165 ADKDGDGEINEEEFLHIM 182
D G ++ + +++
Sbjct: 122 FPPDVAGNVDYKNICYVI 139
>pdb|2CT9|A Chain A, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
pdb|2CT9|B Chain B, The Crystal Structure Of Calcineurin B Homologous Proein 1
(Chp1)
Length = 208
Score = 43.1 bits (100), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 125 AFRLFDEDNTGKISFANLRSV-AVELGENIADEEIQEM----INEADKDGDGEINEEEFL 179
AFRL+D D KIS L V + +G NI+DE++ + I EAD+DGD I+ EF+
Sbjct: 118 AFRLYDLDKDDKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFV 177
Query: 180 HIMKKTSL 187
+++K +
Sbjct: 178 KVLEKVDV 185
>pdb|1K9U|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
pdb|1K9U|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Phl P 7 (Polcalcin) At 1.75 Angstroem
Length = 78
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 120 EEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFL 179
+++ + F+ FD + GKIS + L LG ADE +Q M+ E D DGDG I+ EF+
Sbjct: 3 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADE-VQRMMAEIDTDGDGFIDFNEFI 61
Score = 29.6 bits (65), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 48 DIQEAFALFDKEGTGSISTKELKIAMRALG 77
D++ F FD G G IS EL A+R LG
Sbjct: 4 DMERIFKRFDTNGDGKISLSELTDALRTLG 33
>pdb|2LVI|A Chain A, Solution Structure Of Apo-phl P 7
pdb|2LVJ|A Chain A, Solution Structure Of Hemi-mg-bound Phl P 7
pdb|2LVK|A Chain A, Solution Structure Of Ca-bound Phl P 7
Length = 77
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 24/60 (40%), Positives = 35/60 (58%), Gaps = 1/60 (1%)
Query: 120 EEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFL 179
+++ + F+ FD + GKIS + L LG ADE +Q M+ E D DGDG I+ EF+
Sbjct: 2 DDMERIFKRFDTNGDGKISLSELTDALRTLGSTSADE-VQRMMAEIDTDGDGFIDFNEFI 60
Score = 29.6 bits (65), Expect = 0.93, Method: Compositional matrix adjust.
Identities = 14/30 (46%), Positives = 17/30 (56%)
Query: 48 DIQEAFALFDKEGTGSISTKELKIAMRALG 77
D++ F FD G G IS EL A+R LG
Sbjct: 3 DMERIFKRFDTNGDGKISLSELTDALRTLG 32
>pdb|1TIZ|A Chain A, Solution Structure Of A Calmodulin-Like Calcium-Binding
Domain From Arabidopsis Thaliana
Length = 67
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 33/61 (54%)
Query: 124 KAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLHIMK 183
+ F FD++ GK+S R VA+ E+I + E D DG+GE+N +EF ++
Sbjct: 5 RVFEKFDKNKDGKLSLDEFREVALAFSPYFTQEDIVKFFEEIDVDGNGELNADEFTSCIE 64
Query: 184 K 184
K
Sbjct: 65 K 65
>pdb|2JXL|A Chain A, Solution Structure Of Cardiac N-Domain Troponin C Mutant
F77w-V82a
Length = 89
Score = 42.7 bits (99), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 116 KDSKEEILKAFRLF---DEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGE 172
++ K E AF +F ED G IS L V LG+N EE+QEMI+E D+DG G
Sbjct: 14 EEQKNEFKAAFDIFVLGAED--GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 173 INEEEFLHIMKKT 185
++ +E+L +M +
Sbjct: 72 VDFDEWLVMMARC 84
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 40 ELTPEQVADIQEAFALFDKEG-TGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
+LT EQ + + AF +F G ISTKEL MR LG P D SG
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 99 LLTYKDFLHLVTQKMAD 115
+ + ++L ++ + M D
Sbjct: 71 TVDFDEWLVMMARCMKD 87
>pdb|2E30|A Chain A, Solution Structure Of The Cytoplasmic Region Of Na+H+
Exchanger 1 Complexed With Essential Cofactor
Calcineurin B Homologous Protein 1
Length = 195
Score = 42.4 bits (98), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 41/68 (60%), Gaps = 5/68 (7%)
Query: 125 AFRLFDEDNTGKISFANLRSV-AVELGENIADEEIQEM----INEADKDGDGEINEEEFL 179
AFRL+D D KIS L V + +G NI+DE++ + I EAD+DGD I+ EF+
Sbjct: 118 AFRLYDLDKDEKISRDELLQVLRMMVGVNISDEQLGSIADRTIQEADQDGDSAISFTEFV 177
Query: 180 HIMKKTSL 187
+++K +
Sbjct: 178 KVLEKVDV 185
>pdb|2KGB|C Chain C, Nmr Solution Of The Regulatory Domain Cardiac
F77w-Troponin C In Complex With The Cardiac Troponin I
144-163 Switch Peptide
Length = 89
Score = 42.0 bits (97), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 116 KDSKEEILKAFRLF---DEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGE 172
++ K E AF +F ED G IS L V LG+N EE+QEMI+E D+DG G
Sbjct: 14 EEQKNEFKAAFDIFVLGAED--GCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSGT 71
Query: 173 INEEEFLHIMKKT 185
++ +E+L +M +
Sbjct: 72 VDFDEWLVMMVRC 84
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 25/77 (32%), Positives = 36/77 (46%), Gaps = 1/77 (1%)
Query: 40 ELTPEQVADIQEAFALFDKEG-TGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
+LT EQ + + AF +F G ISTKEL MR LG P D SG
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVMRMLGQNPTPEELQEMIDEVDEDGSG 70
Query: 99 LLTYKDFLHLVTQKMAD 115
+ + ++L ++ + M D
Sbjct: 71 TVDFDEWLVMMVRCMKD 87
>pdb|1S6J|A Chain A, N-Terminal Region Of The Ca2+-Saturated Calcium Regulatory
Domain (Cld) From Soybean Calcium-Dependent Protein
Kinase- Alpha (Cdpk)
Length = 87
Score = 41.6 bits (96), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/72 (36%), Positives = 45/72 (62%), Gaps = 3/72 (4%)
Query: 111 QKMADKDSKEEI--LKA-FRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADK 167
+ MA++ S+EEI LK F++ D DN+G I+F L+ +G + + EI+++++ AD
Sbjct: 11 KHMAERLSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADI 70
Query: 168 DGDGEINEEEFL 179
D G I+ EF+
Sbjct: 71 DKSGTIDYGEFI 82
Score = 35.0 bits (79), Expect = 0.023, Method: Compositional matrix adjust.
Identities = 17/66 (25%), Positives = 33/66 (50%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
L+ E++ ++E F + D + +G+I+ ELK ++ +G E D SG +
Sbjct: 17 LSEEEIGGLKELFKMIDTDNSGTITFDELKDGLKRVGSELMESEIKDLMDAADIDKSGTI 76
Query: 101 TYKDFL 106
Y +F+
Sbjct: 77 DYGEFI 82
>pdb|1DGU|A Chain A, Homology-Based Model Of Calcium-Saturated Cib (Calcium-And
Integrin-Binding Protein)
pdb|1DGV|A Chain A, Homology-Based Model Of Apo Cib (Calcium-And Integrin-
Binding Protein)
pdb|1XO5|A Chain A, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1XO5|B Chain B, Crystal Structure Of Cib1, An Ef-Hand, Integrin And
Kinase- Binding Protein
pdb|1Y1A|A Chain A, Crystal Structure Of Calcium And Integrin Binding Protein
pdb|1Y1A|B Chain B, Crystal Structure Of Calcium And Integrin Binding Protein
Length = 183
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 13/97 (13%)
Query: 100 LTYKDFLHLVT--QKMADKDSKEEILKAFRLFDEDNTGKISFANL-RSVAVELGE----N 152
L+++DFL L++ A D K AFR+FD D+ G ++ +L R V GE
Sbjct: 78 LSFEDFLDLLSVFSDTATPDIKSHY--AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTR 135
Query: 153 IADEEIQEMIN----EADKDGDGEINEEEFLHIMKKT 185
++ E++++I+ E+D D DG IN EF H++ ++
Sbjct: 136 LSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRS 172
>pdb|2AUC|A Chain A, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|B Chain B, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
pdb|2AUC|C Chain C, Structure Of The Plasmodium Mtip-Myoa Complex, A Key
Component Of The Parasite Invasion Motor
Length = 126
Score = 41.2 bits (95), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 17/64 (26%), Positives = 39/64 (60%)
Query: 100 LTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQ 159
LTY+ +L +T + D+D+ EE++K F FD +++G ++ +++ G+ + ++E
Sbjct: 45 LTYEQYLEYLTXCVHDRDNXEELIKXFSHFDNNSSGFLTKNQXKNILTTWGDALTEQEAN 104
Query: 160 EMIN 163
+ +N
Sbjct: 105 DALN 108
>pdb|2L4H|A Chain A, The Solution Structure Of Calcium Bound Cib1
pdb|2L4I|A Chain A, The Solution Structure Of Magnesium Bound Cib1
pdb|2LM5|A Chain A, Solution Structure Of Ca2+-Cib1 In Complex With The
Cytoplasmic Domain Of The Integrin Aiib Subunit
Length = 214
Score = 40.8 bits (94), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 54/97 (55%), Gaps = 13/97 (13%)
Query: 100 LTYKDFLHLVT--QKMADKDSKEEILKAFRLFDEDNTGKISFANL-RSVAVELGE----N 152
L+++DFL L++ A D K AFR+FD D+ G ++ +L R V GE
Sbjct: 109 LSFEDFLDLLSVFSDTATPDIKSHY--AFRIFDFDDDGTLNREDLSRLVNCLTGEGEDTR 166
Query: 153 IADEEIQEMIN----EADKDGDGEINEEEFLHIMKKT 185
++ E++++I+ E+D D DG IN EF H++ ++
Sbjct: 167 LSASEMKQLIDNILEESDIDRDGTINLSEFQHVISRS 203
>pdb|1SJJ|A Chain A, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
pdb|1SJJ|B Chain B, Cryo-Em Structure Of Chicken Gizzard Smooth Muscle Alpha-
Actinin
Length = 863
Score = 40.4 bits (93), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 16/92 (17%), Positives = 50/92 (54%)
Query: 41 LTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
++ EQ+ + + +F FD++ TG + ++ + + ++G+ + G++
Sbjct: 719 ISQEQMNEFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVV 778
Query: 101 TYKDFLHLVTQKMADKDSKEEILKAFRLFDED 132
T++ F+ ++++ AD D+ ++++ +F++ D
Sbjct: 779 TFQAFIDFMSRETADTDTADQVMASFKILAGD 810
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 14/66 (21%), Positives = 31/66 (46%)
Query: 121 EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
E +F FD TG + + R+ + +G N+ + E +++ D + G + + F+
Sbjct: 726 EFRASFNHFDRKKTGMMDCEDFRACLISMGYNMGEAEFARIMSIVDPNRMGVVTFQAFID 785
Query: 181 IMKKTS 186
M + +
Sbjct: 786 FMSRET 791
>pdb|3F45|A Chain A, Structure Of The R75a Mutant Of Rat Alpha-Parvalbumin
Length = 109
Score = 40.0 bits (92), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/80 (33%), Positives = 42/80 (52%), Gaps = 6/80 (7%)
Query: 102 YKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIAD---EEI 158
+K F +V K K S +++ K F + D+D +G I L S+ + AD +E
Sbjct: 26 HKKFFQMVGLK---KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDAADLSAKET 82
Query: 159 QEMINEADKDGDGEINEEEF 178
+ ++ DKDGDG+I EEF
Sbjct: 83 KTLMAAGDKDGDGKIGVEEF 102
>pdb|1H4B|A Chain A, Solution Structure Of The Birch Pollen Allergen Bet V 4
Length = 84
Score = 39.7 bits (91), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/64 (42%), Positives = 37/64 (57%), Gaps = 4/64 (6%)
Query: 115 DKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEIN 174
DK +E I F+ FD + GKIS A L LG +I +E++ M+ E D DGDG I+
Sbjct: 7 DKAERERI---FKRFDANGDGKISAAELGEALKTLG-SITPDEVKHMMAEIDTDGDGFIS 62
Query: 175 EEEF 178
+EF
Sbjct: 63 FQEF 66
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 14/35 (40%), Positives = 19/35 (54%)
Query: 43 PEQVADIQEAFALFDKEGTGSISTKELKIAMRALG 77
P+ A+ + F FD G G IS EL A++ LG
Sbjct: 5 PQDKAERERIFKRFDANGDGKISAAELGEALKTLG 39
>pdb|3RV5|A Chain A, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|B Chain B, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|C Chain C, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
pdb|3RV5|D Chain D, Crystal Structure Of Human Cardiac Troponin C Regulatory
Domain In Complex With Cadmium And Deoxycholic Acid
Length = 89
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 28/45 (62%)
Query: 135 GKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFL 179
G IS L V LG+N EE+QE I+E D+DG G ++ +EFL
Sbjct: 34 GCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSGTVDFDEFL 78
Score = 31.6 bits (70), Expect = 0.28, Method: Compositional matrix adjust.
Identities = 24/68 (35%), Positives = 31/68 (45%), Gaps = 1/68 (1%)
Query: 40 ELTPEQVADIQEAFALFDKEG-TGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSG 98
+LT EQ + + AF +F G ISTKEL R LG P D SG
Sbjct: 11 QLTEEQKNEFKAAFDIFVLGAEDGCISTKELGKVXRXLGQNPTPEELQEXIDEVDEDGSG 70
Query: 99 LLTYKDFL 106
+ + +FL
Sbjct: 71 TVDFDEFL 78
>pdb|2OPO|A Chain A, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|B Chain B, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|C Chain C, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
pdb|2OPO|D Chain D, Crystal Structure Of The Calcium-Binding Pollen Allergen
Che A 3
Length = 86
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/74 (33%), Positives = 42/74 (56%), Gaps = 4/74 (5%)
Query: 113 MADKDSKEEIL---KAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDG 169
MA +D+ ++I + F+ FD + GKIS + L LG ++ +E++ M+ E D DG
Sbjct: 1 MAAEDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG-SVTPDEVRRMMAEIDTDG 59
Query: 170 DGEINEEEFLHIMK 183
DG I+ +EF +
Sbjct: 60 DGFISFDEFTDFAR 73
Score = 35.8 bits (81), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 17/38 (44%), Positives = 23/38 (60%)
Query: 40 ELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALG 77
E TP+ +AD + F FD G G IS+ EL A++ LG
Sbjct: 4 EDTPQDIADRERIFKRFDTNGDGKISSSELGDALKTLG 41
>pdb|5PAL|A Chain A, Crystal Structure Of The Unique Parvalbumin Component From
Muscle Of The Leopard Shark (Triakis Semifasciata). The
First X-Ray Study Of An Alpha-Parvalbumin
Length = 109
Score = 38.5 bits (88), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/88 (28%), Positives = 42/88 (47%), Gaps = 6/88 (6%)
Query: 98 GLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVEL---GENIA 154
G YK F HLV K + ++ + F + D+D +G I L+ V G ++
Sbjct: 22 GTFDYKRFFHLVGLKGK---TDAQVKEVFEILDKDQSGFIEEEELKGVLKGFSAHGRDLN 78
Query: 155 DEEIQEMINEADKDGDGEINEEEFLHIM 182
D E + ++ D D DG+I +EF ++
Sbjct: 79 DTETKALLAAGDSDHDGKIGADEFAKMV 106
>pdb|3PAT|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|2PAS|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin
pdb|1PVA|A Chain A, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
pdb|1PVA|B Chain B, Comparison Between The Crystal And The Solution Structures
Of The Ef Hand Parvalbumin (alpha Component From Pike
Muscle)
Length = 110
Score = 38.5 bits (88), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 40/84 (47%), Gaps = 6/84 (7%)
Query: 98 GLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVEL---GENIA 154
G +K F LV K S ++ K F+ D D +G I L+ V G ++
Sbjct: 23 GSFNHKKFFALVGLKAM---SANDVKKVFKAIDADASGFIEEEELKFVLKSFAADGRDLT 79
Query: 155 DEEIQEMINEADKDGDGEINEEEF 178
D E + + ADKDGDG+I +EF
Sbjct: 80 DAETKAFLKAADKDGDGKIGIDEF 103
>pdb|2BEC|A Chain A, Crystal Structure Of Chp2 In Complex With Its Binding
Region In Nhe1 And Insights Into The Mechanism Of Ph
Regulation
Length = 202
Score = 38.1 bits (87), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 13/72 (18%)
Query: 125 AFRLFDEDNTGKIS----FANLR-----SVAVELGENIADEEIQEMINEADKDGDGEINE 175
AF+L+D D GKIS LR V E ENIAD +QE AD+DGDG ++
Sbjct: 119 AFQLYDLDRDGKISRHEMLQVLRLMVGVQVTEEQLENIADRTVQE----ADEDGDGAVSF 174
Query: 176 EEFLHIMKKTSL 187
EF ++K +
Sbjct: 175 VEFTKSLEKMDV 186
>pdb|1RTP|1 Chain 1, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|2 Chain 2, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RTP|3 Chain 3, Refined X-ray Structure Of Rat Parvalbumin, A Mammalian
Alpha-lineage Parvalbumin, At 2.0 A Resolution
pdb|1RWY|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|B Chain B, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|1RWY|C Chain C, Crystal Structure Of Rat Alpha-parvalbumin At 1.05
Resolution
pdb|2JWW|A Chain A, Calcium-Free Rat Alpha-Parvalbumin
Length = 109
Score = 37.7 bits (86), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 102 YKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIAD---EEI 158
+K F +V K K S +++ K F + D+D +G I L S+ + D +E
Sbjct: 26 HKKFFQMVGLK---KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKET 82
Query: 159 QEMINEADKDGDGEINEEEF 178
+ ++ DKDGDG+I EEF
Sbjct: 83 KTLMAAGDKDGDGKIGVEEF 102
>pdb|1HQV|A Chain A, Structure Of Apoptosis-Linked Protein Alg-2
Length = 191
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 11/102 (10%)
Query: 38 KFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNS 97
+F + + D Q F +D++ +G I ELK A+ G+
Sbjct: 84 EFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGR 143
Query: 98 GLLTYKDFLH--LVTQKMADKDSKEEILKAFRLFDEDNTGKI 137
G + + DF+ +V Q++ D FR +D D G I
Sbjct: 144 GQIAFDDFIQGCIVLQRLTD---------IFRRYDTDQDGWI 176
Score = 34.3 bits (77), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 43 PEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXX-XXXXXXXXXXXXDNSGLLT 101
P+Q + + F DK+ +G IS EL+ A+ + P +N +
Sbjct: 23 PDQ-SFLWNVFQRVDKDRSGVISDNELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVN 81
Query: 102 YKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEM 161
+ +F V + + D + FR +D DN+G I L+ G ++D+ +
Sbjct: 82 FSEFTG-VWKYITDWQN------VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDIL 134
Query: 162 INEADKDGDGEINEEEFLH 180
I + D+ G G+I ++F+
Sbjct: 135 IRKFDRQGRGQIAFDDFIQ 153
>pdb|2ZRS|A Chain A, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|B Chain B, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|C Chain C, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|D Chain D, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|E Chain E, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|F Chain F, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|G Chain G, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRS|H Chain H, Crystal Structure Of Ca2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|C Chain C, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|D Chain D, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|E Chain E, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|F Chain F, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|G Chain G, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
pdb|2ZRT|H Chain H, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Length = 168
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 11/103 (10%)
Query: 37 PKFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDN 96
+F + + D Q F +D++ +G I ELK A+ G+
Sbjct: 60 SEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQG 119
Query: 97 SGLLTYKDFLH--LVTQKMADKDSKEEILKAFRLFDEDNTGKI 137
G + + DF+ +V Q++ D FR +D D G I
Sbjct: 120 RGQIAFDDFIQGCIVLQRLTD---------IFRRYDTDQDGWI 153
Score = 33.5 bits (75), Expect = 0.065, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 125 AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
FR +D DN+G I L+ G ++D+ +I + D+ G G+I ++F+
Sbjct: 75 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQ 130
>pdb|2ZNE|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
pdb|2ZNE|B Chain B, Crystal Structure Of Zn2+-Bound Form Of Des3-23alg-2
Complexed With Alix Abs Peptide
Length = 169
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 11/103 (10%)
Query: 37 PKFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDN 96
+F + + D Q F +D++ +G I ELK A+ G+
Sbjct: 61 SEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQG 120
Query: 97 SGLLTYKDFLH--LVTQKMADKDSKEEILKAFRLFDEDNTGKI 137
G + + DF+ +V Q++ D FR +D D G I
Sbjct: 121 RGQIAFDDFIQGCIVLQRLTD---------IFRRYDTDQDGWI 154
Score = 33.5 bits (75), Expect = 0.067, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 125 AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
FR +D DN+G I L+ G ++D+ +I + D+ G G+I ++F+
Sbjct: 76 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQ 131
>pdb|2ZN9|A Chain A, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZN9|B Chain B, Crystal Structure Of Ca2+-bound Form Of Des3-20alg-2
pdb|2ZND|A Chain A, Crystal Structure Of Ca2+-Free Form Of Des3-20alg-2
Length = 172
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 11/102 (10%)
Query: 38 KFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNS 97
+F + + D Q F +D++ +G I ELK A+ G+
Sbjct: 65 EFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGR 124
Query: 98 GLLTYKDFLH--LVTQKMADKDSKEEILKAFRLFDEDNTGKI 137
G + + DF+ +V Q++ D FR +D D G I
Sbjct: 125 GQIAFDDFIQGCIVLQRLTD---------IFRRYDTDQDGWI 157
Score = 34.3 bits (77), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 43 PEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXX-XXXXXXXXXXXXDNSGLLT 101
P+Q + + F DK+ +G IS EL+ A+ + P +N +
Sbjct: 4 PDQ-SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVN 62
Query: 102 YKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEM 161
+ +F V + + D + FR +D DN+G I L+ G ++D+ +
Sbjct: 63 FSEFTG-VWKYITDWQN------VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDIL 115
Query: 162 INEADKDGDGEINEEEFLH 180
I + D+ G G+I ++F+
Sbjct: 116 IRKFDRQGRGQIAFDDFIQ 134
>pdb|2ZN8|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Alg-2
Length = 190
Score = 37.7 bits (86), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 11/103 (10%)
Query: 37 PKFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDN 96
+F + + D Q F +D++ +G I ELK A+ G+
Sbjct: 82 SEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQG 141
Query: 97 SGLLTYKDFLH--LVTQKMADKDSKEEILKAFRLFDEDNTGKI 137
G + + DF+ +V Q++ D FR +D D G I
Sbjct: 142 RGQIAFDDFIQGCIVLQRLTD---------IFRRYDTDQDGWI 175
Score = 33.9 bits (76), Expect = 0.062, Method: Compositional matrix adjust.
Identities = 16/56 (28%), Positives = 29/56 (51%)
Query: 125 AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLH 180
FR +D DN+G I L+ G ++D+ +I + D+ G G+I ++F+
Sbjct: 97 VFRTYDRDNSGMIDKNELKQALSGFGYRLSDQFHDILIRKFDRQGRGQIAFDDFIQ 152
>pdb|1S3P|A Chain A, Crystal Structure Of Rat Alpha-parvalbumin S55d/e59d
Mutant
Length = 109
Score = 36.6 bits (83), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 26/80 (32%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 102 YKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIAD---EEI 158
+K F +V K K S +++ K F + D+D G I L S+ + D +E
Sbjct: 26 HKKFFQMVGLK---KKSADDVKKVFHILDKDKDGFIDEDELGSILKGFSSDARDLSAKET 82
Query: 159 QEMINEADKDGDGEINEEEF 178
+ ++ DKDGDG+I EEF
Sbjct: 83 KTLMAAGDKDGDGKIGVEEF 102
>pdb|3AAK|A Chain A, Crystal Structure Of Zn2+-Bound Form Of Des3-20alg-2f122a
Length = 172
Score = 36.6 bits (83), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 24/102 (23%), Positives = 40/102 (39%), Gaps = 11/102 (10%)
Query: 38 KFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNS 97
+F + + D Q F +D++ +G I ELK A+ G+
Sbjct: 65 EFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDILIRKFDRQGR 124
Query: 98 GLLTYKDFLH--LVTQKMADKDSKEEILKAFRLFDEDNTGKI 137
G + + DF+ +V Q++ D FR +D D G I
Sbjct: 125 GQIAFDDFIQGCIVLQRLTD---------IFRRYDTDQDGWI 157
Score = 33.1 bits (74), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 32/139 (23%), Positives = 60/139 (43%), Gaps = 9/139 (6%)
Query: 43 PEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXX-XXXXXXXXXXXXDNSGLLT 101
P+Q + + F DK+ +G IS EL+ A+ + P +N +
Sbjct: 4 PDQ-SFLWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVN 62
Query: 102 YKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEM 161
+ +F V + + D + FR +D DN+G I L+ G ++D+ +
Sbjct: 63 FSEFTG-VWKYITDWQN------VFRTYDRDNSGMIDKNELKQALSGAGYRLSDQFHDIL 115
Query: 162 INEADKDGDGEINEEEFLH 180
I + D+ G G+I ++F+
Sbjct: 116 IRKFDRQGRGQIAFDDFIQ 134
>pdb|2L2E|A Chain A, Solution Nmr Structure Of Myristoylated Ncs1p In Apo Form
Length = 190
Score = 36.2 bits (82), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 28/113 (24%), Positives = 57/113 (50%), Gaps = 20/113 (17%)
Query: 95 DNSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVA-------- 146
D +G + +K+F+ ++ + + ++++ AF+L+D DN G IS+ + +
Sbjct: 75 DKNGYIDFKEFICALSV-TSRGELNDKLIWAFQLYDLDNNGLISYDEMLRIVDAIYKMVG 133
Query: 147 --VEL--GENIADEEIQEMINEADKDGDGEINEEEFLH-------IMKKTSLY 188
V+L E+ ++ + ++ N DK+ DG++ EEF I+ SLY
Sbjct: 134 SMVKLPEDEDTPEKRVNKIFNMMDKNKDGQLTLEEFCEGSKRDPTIVSALSLY 186
>pdb|1S1E|A Chain A, Crystal Structure Of Kv Channel-Interacting Protein 1
(Kchip-1)
Length = 224
Score = 35.4 bits (80), Expect = 0.021, Method: Compositional matrix adjust.
Identities = 34/152 (22%), Positives = 56/152 (36%), Gaps = 15/152 (9%)
Query: 32 KKPSGPKFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXX 91
++PS K E E L E + + +EL++ R E
Sbjct: 16 RRPSKDKIEDELEMTMVCHRPEGLEQLEAQTNFTKRELQVLYRGFKNECP---------- 65
Query: 92 XXXDNSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGE 151
SG++ + F + Q D+ F FD TG + F + + L
Sbjct: 66 -----SGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLR 120
Query: 152 NIADEEIQEMINEADKDGDGEINEEEFLHIMK 183
E+++ N D + DG IN+EE + I+K
Sbjct: 121 GTVHEKLRWTFNLYDINKDGYINKEEMMDIVK 152
>pdb|1S6C|A Chain A, Crystal Structure Of The Complex Between Kchip1 And Kv4.2
N1-30
Length = 183
Score = 35.0 bits (79), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 38/87 (43%)
Query: 97 SGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADE 156
SG++ + F + Q D+ F FD TG + F + + L E
Sbjct: 33 SGVVNEETFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHE 92
Query: 157 EIQEMINEADKDGDGEINEEEFLHIMK 183
+++ N D + DG IN+EE + I+K
Sbjct: 93 KLRWTFNLYDINKDGYINKEEMMDIVK 119
>pdb|1XVJ|A Chain A, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
pdb|1XVJ|B Chain B, Crystal Structure Of Rat Alpha-Parvalbumin D94sG98E MUTANT
Length = 109
Score = 35.0 bits (79), Expect = 0.026, Method: Compositional matrix adjust.
Identities = 25/80 (31%), Positives = 40/80 (50%), Gaps = 6/80 (7%)
Query: 102 YKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIAD---EEI 158
+K F +V K K S +++ K F + D+D +G I L S+ + D +E
Sbjct: 26 HKKFFQMVGLK---KKSADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKET 82
Query: 159 QEMINEADKDGDGEINEEEF 178
+ ++ DKDG G+I EEF
Sbjct: 83 KTLMAAGDKDGSGKIEVEEF 102
>pdb|3DD4|A Chain A, Structural Basis Of Kchip4a Modulation Of Kv4.3 Slow
Inactivation
Length = 229
Score = 34.7 bits (78), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 26/87 (29%), Positives = 38/87 (43%)
Query: 97 SGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADE 156
SG++ + F + +Q DS F FD D+ G +SF + L E
Sbjct: 79 SGVVNEETFKEIYSQFFPQGDSTTYAHFLFNAFDTDHNGAVSFEDFIKGLSILLRGTVQE 138
Query: 157 EIQEMINEADKDGDGEINEEEFLHIMK 183
++ N D + DG I +EE L IMK
Sbjct: 139 KLNWAFNLYDINKDGYITKEEMLDIMK 165
>pdb|2NZ0|A Chain A, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
pdb|2NZ0|C Chain C, Crystal Structure Of Potassium Channel Kv4.3 In Complex
With Its Regulatory Subunit Kchip1 (Casp Target)
Length = 180
Score = 34.7 bits (78), Expect = 0.032, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%)
Query: 97 SGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADE 156
SG++ F + Q D+ F FD TG + F + + L E
Sbjct: 30 SGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHE 89
Query: 157 EIQEMINEADKDGDGEINEEEFLHIMK 183
+++ N D + DG IN+EE + I+K
Sbjct: 90 KLRWTFNLYDINKDGYINKEEMMDIVK 116
>pdb|2I2R|E Chain E, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|F Chain F, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|G Chain G, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|H Chain H, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|M Chain M, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|N Chain N, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|O Chain O, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
pdb|2I2R|P Chain P, Crystal Structure Of The Kchip1KV4.3 T1 COMPLEX
Length = 180
Score = 34.7 bits (78), Expect = 0.033, Method: Compositional matrix adjust.
Identities = 23/87 (26%), Positives = 37/87 (42%)
Query: 97 SGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADE 156
SG++ F + Q D+ F FD TG + F + + L E
Sbjct: 30 SGVVNEDTFKQIYAQFFPHGDASTYAHYLFNAFDTTQTGSVKFEDFVTALSILLRGTVHE 89
Query: 157 EIQEMINEADKDGDGEINEEEFLHIMK 183
+++ N D + DG IN+EE + I+K
Sbjct: 90 KLRWTFNLYDINKDGYINKEEMMDIVK 116
>pdb|1A75|B Chain B, Whiting Parvalbumin
Length = 109
Score = 34.3 bits (77), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 118 SKEEILKAFRLFDEDNTGKISFANLR---SVAVELGENIADEEIQEMINEADKDGDGEIN 174
S ++I KAF D+D +G I L+ V + D E + + D DGDG I
Sbjct: 40 SADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIG 99
Query: 175 EEEFLHIMK 183
EE++ ++K
Sbjct: 100 VEEWVALVK 108
>pdb|1A75|A Chain A, Whiting Parvalbumin
Length = 108
Score = 34.3 bits (77), Expect = 0.041, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 34/69 (49%), Gaps = 3/69 (4%)
Query: 118 SKEEILKAFRLFDEDNTGKISFANLR---SVAVELGENIADEEIQEMINEADKDGDGEIN 174
S ++I KAF D+D +G I L+ V + D E + + D DGDG I
Sbjct: 39 SADDIKKAFVFIDQDKSGFIEEDELKLFLQVFKAGARALTDAETKAFLKAGDSDGDGAIG 98
Query: 175 EEEFLHIMK 183
EE++ ++K
Sbjct: 99 VEEWVALVK 107
>pdb|1CDP|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
pdb|4CPV|A Chain A, Refined Crystal Structure Of Calcium-Liganded Carp
Parvalbumin 4.25 At 1.5-Angstroms Resolution
pdb|5CPV|A Chain A, Restrained Least Squares Refinement Of Native (Calcium)
And Cadmium-Substituted Carp Parvalbumin Using X-Ray
Crystallographic Data At 1.6-Angstroms Resolution
Length = 109
Score = 34.3 bits (77), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 22/73 (30%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 118 SKEEILKAFRLFDEDNTG-------KISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
S +++ KAF + D+D +G K+ N ++ A L D E + + D DGD
Sbjct: 40 SADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARAL----TDGETKTFLKAGDSDGD 95
Query: 171 GEINEEEFLHIMK 183
G+I +EF ++K
Sbjct: 96 GKIGVDEFTALVK 108
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 37 PKFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMR 74
K LT + D+++AFA+ D++ +G I ELK+ ++
Sbjct: 32 AKVGLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQ 69
>pdb|1G33|A Chain A, Crystal Structure Of Rat Parvalbumin Without The
N-Terminal Domain
Length = 73
Score = 33.9 bits (76), Expect = 0.050, Method: Compositional matrix adjust.
Identities = 21/64 (32%), Positives = 34/64 (53%), Gaps = 3/64 (4%)
Query: 118 SKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIAD---EEIQEMINEADKDGDGEIN 174
S +++ K F + D+D +G I L S+ + D +E + ++ DKDGDG+I
Sbjct: 3 SADDVKKVFHILDKDKSGFIEEDELGSILKGFSSDARDLSAKETKTLMAAGDKDGDGKIG 62
Query: 175 EEEF 178
EEF
Sbjct: 63 VEEF 66
>pdb|2PVB|A Chain A, Pike Parvalbumin (Pi 4.10) At Low Temperature (100k) And
Atomic Resolution (0.91 A).
pdb|3PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PVB|A Chain A, X-Ray Structure Of A New Crystal Form Of Pike 4.10
Parvalbumin
pdb|2PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|1PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
pdb|4PAL|A Chain A, Ionic Interactions With Parvalbumins. Crystal Structure
Determination Of Pike 4.10 Parvalbumin In Four Different
Ionic Environments
Length = 108
Score = 33.9 bits (76), Expect = 0.058, Method: Compositional matrix adjust.
Identities = 21/69 (30%), Positives = 35/69 (50%), Gaps = 3/69 (4%)
Query: 118 SKEEILKAFRLFDEDNTGKISFANLRSVAVEL---GENIADEEIQEMINEADKDGDGEIN 174
S +++ KAF + D+D +G I L+ + D E + + + DKDGDG I
Sbjct: 39 SLDDVKKAFYVIDQDKSGFIEEDELKLFLQNFSPSARALTDAETKAFLADGDKDGDGMIG 98
Query: 175 EEEFLHIMK 183
+EF ++K
Sbjct: 99 VDEFAAMIK 107
>pdb|2FCD|A Chain A, Solution Structure Of N-Lobe Myosin Light Chain From
Saccharomices Cerevisiae
Length = 78
Score = 33.9 bits (76), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 13/31 (41%), Positives = 21/31 (67%)
Query: 50 QEAFALFDKEGTGSISTKELKIAMRALGFEP 80
++ F LFDK+G G+I+ L +RA+G+ P
Sbjct: 7 KDIFTLFDKKGQGAIAKDSLGDYLRAIGYNP 37
>pdb|1RJV|A Chain A, Solution Structure Of Human Alpha-Parvalbumin Refined With
A Paramagnetism-Based Strategy
pdb|1RK9|A Chain A, Solution Structure Of Human Alpha-Parvalbumin (Minimized
Average Structure)
Length = 110
Score = 33.5 bits (75), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 23/80 (28%), Positives = 41/80 (51%), Gaps = 6/80 (7%)
Query: 102 YKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVEL---GENIADEEI 158
+K F +V K K S +++ K F + D+D +G I L + +++ +E
Sbjct: 27 HKKFFQMVGLK---KKSADDVKKVFHMLDKDKSGFIEEDELGFILKGFSPDARDLSAKET 83
Query: 159 QEMINEADKDGDGEINEEEF 178
+ ++ DKDGDG+I +EF
Sbjct: 84 KMLMAAGDKDGDGKIGVDEF 103
>pdb|1YX7|A Chain A, Nmr Structure Of Calsensin, Energy Minimized Average
Structure.
pdb|1YX8|A Chain A, Nmr Structure Of Calsensin, 20 Low Energy Structures
Length = 83
Score = 33.5 bits (75), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 21/68 (30%), Positives = 41/68 (60%), Gaps = 6/68 (8%)
Query: 119 KEEILKAFRLFDEDNTGKISFANLRSVAVELG--ENIADEEIQE----MINEADKDGDGE 172
K E+ AF+ D + G ++ L++ V L + ++ ++++E +I ADK+ DG+
Sbjct: 6 KAELEAAFKKLDANGDGYVTALELQTFMVTLDAYKALSKDKVKEASAKLIKMADKNSDGK 65
Query: 173 INEEEFLH 180
I++EEFL+
Sbjct: 66 ISKEEFLN 73
>pdb|1BU3|A Chain A, Refined Crystal Structure Of Calcium-Bound Silver Hake (Pi
4.2) Parvalbumin At 1.65 A
Length = 109
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 40/89 (44%), Gaps = 10/89 (11%)
Query: 100 LTYKDFLHLV--TQKMADKDSKEEILKAFRLFDEDNTGKISFANLR---SVAVELGENIA 154
YK F V T K AD +I KAF + D+D +G I L+ V +
Sbjct: 25 FNYKAFFAKVGLTAKSAD-----DIKKAFFVIDQDKSGFIEEDELKLFLQVFSAGARALT 79
Query: 155 DEEIQEMINEADKDGDGEINEEEFLHIMK 183
D E + + D DGDG I +E+ ++K
Sbjct: 80 DAETKAFLKAGDSDGDGAIGVDEWAALVK 108
>pdb|1B8R|A Chain A, Parvalbumin
Length = 108
Score = 32.7 bits (73), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/73 (28%), Positives = 37/73 (50%), Gaps = 11/73 (15%)
Query: 118 SKEEILKAFRLFDEDNTG-------KISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
S +++ KAF + D+D +G K+ N ++ A L D E + + D DGD
Sbjct: 39 SADDVKKAFAIIDQDKSGFIEEDELKLFLQNFKADARAL----TDGETKTFLKAGDSDGD 94
Query: 171 GEINEEEFLHIMK 183
G+I +E+ ++K
Sbjct: 95 GKIGVDEWTALVK 107
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 13/38 (34%), Positives = 24/38 (63%)
Query: 37 PKFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMR 74
K LT + D+++AFA+ D++ +G I ELK+ ++
Sbjct: 31 AKVGLTSKSADDVKKAFAIIDQDKSGFIEEDELKLFLQ 68
>pdb|2JJZ|B Chain B, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|C Chain C, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2JJZ|D Chain D, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
pdb|2VTG|A Chain A, Crystal Structure Of Human Iba2, Trigonal Crystal Form
Length = 150
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 108 LVTQKMADKDSKEEILKAFRL----FDEDNTGKISFANLRSVAVELGENIADEEIQEMIN 163
L QK +D+++ E L AF+ FD +N G+I +L+ + +LG E+++MI+
Sbjct: 34 LCDQKYSDEENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMIS 93
Query: 164 EADKDGDGEINEEEFLHIM 182
E I+ +F+++M
Sbjct: 94 EVTGGVSDTISYRDFVNMM 112
>pdb|2JJZ|A Chain A, Crystal Structure Of Human Iba2, Orthorhombic Crystal Form
Length = 150
Score = 32.7 bits (73), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 23/79 (29%), Positives = 43/79 (54%), Gaps = 4/79 (5%)
Query: 108 LVTQKMADKDSKEEILKAFRL----FDEDNTGKISFANLRSVAVELGENIADEEIQEMIN 163
L QK +D+++ E L AF+ FD +N G+I +L+ + +LG E+++MI+
Sbjct: 34 LCDQKYSDEENLPEKLTAFKEKYMEFDLNNEGEIDLMSLKRMMEKLGVPKTHLEMKKMIS 93
Query: 164 EADKDGDGEINEEEFLHIM 182
E I+ +F+++M
Sbjct: 94 EVTGGVSDTISYRDFVNMM 112
>pdb|1JF0|A Chain A, The Crystal Structure Of Obelin From Obelia Geniculata At
1.82 A Resolution
Length = 195
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 25/100 (25%), Positives = 38/100 (38%), Gaps = 8/100 (8%)
Query: 2 GAHFRKSNSSPTPIFVNNNNSIPNATAAPMKKPSGPKFELTPEQVADIQEA-FALFDKEG 60
G + P F+ ++ NA A + P + + +A F +FDK+G
Sbjct: 74 GCGLEYGKETKFPEFLEGWKNLANADLAKWARNE-------PTLIREWGDAVFDIFDKDG 126
Query: 61 TGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
+G+I+ E K R G P DNSG L
Sbjct: 127 SGTITLDEWKAYGRISGISPSEEDCEKTFQHCDLDNSGEL 166
>pdb|1Y1X|A Chain A, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
pdb|1Y1X|B Chain B, Structural Analysis Of A Homolog Of Programmed Cell Death
6 Protein From Leishmania Major Friedlin
Length = 191
Score = 32.7 bits (73), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 33/63 (52%), Gaps = 2/63 (3%)
Query: 120 EEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEF- 178
+E+++ FR D D +G IS L + G + +++++ DK+ GEI +EF
Sbjct: 27 QELMEWFRAVDTDGSGAISVPELNAALSSAGVPFSLATTEKLLHMYDKNHSGEITFDEFK 86
Query: 179 -LH 180
LH
Sbjct: 87 DLH 89
Score = 28.5 bits (62), Expect = 2.1, Method: Compositional matrix adjust.
Identities = 17/94 (18%), Positives = 37/94 (39%), Gaps = 7/94 (7%)
Query: 46 VADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDF 105
+ ++E F D G G + + E++ A+ + G++ G L + D+
Sbjct: 92 ILSMREGFRKRDSSGDGRLDSNEVRAALLSSGYQVSEQTFQALMRKFDRQRRGSLGFDDY 151
Query: 106 LHLVTQKMADKDSKEEILKAFRLFDEDNTGKISF 139
+ L + F +D + TG+++F
Sbjct: 152 VELSIFVC-------RVRNVFAFYDRERTGQVTF 178
>pdb|1KFX|S Chain S, Crystal Structure Of Human M-Calpain Form I
pdb|1KFU|S Chain S, Crystal Structure Of Human M-Calpain Form Ii
Length = 184
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 24/100 (24%), Positives = 43/100 (43%), Gaps = 8/100 (8%)
Query: 38 KFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNS 97
+F+ + Q + FD + +G+I + EL A A GF D S
Sbjct: 79 EFKYLWNNIKRWQAIYKQFDTDRSGTICSSELPGAFEAAGFH-LNEHLYNMIIRRYSDES 137
Query: 98 GLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKI 137
G + + +F+ + + A + +AF+ D+D TG+I
Sbjct: 138 GNMDFDNFISCLVRLDA-------MFRAFKSLDKDGTGQI 170
>pdb|2JUL|A Chain A, Nmr Structure Of Dream
Length = 256
Score = 32.3 bits (72), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 27/92 (29%), Positives = 39/92 (42%), Gaps = 2/92 (2%)
Query: 97 SGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADE 156
+GL+ F + +Q D+ F FD D G I F + L E
Sbjct: 106 TGLVDEDTFKLIYSQFFPQGDATTYAHFLFNAFDADGNGAIHFEDFVVGLSILLRGTVHE 165
Query: 157 EIQEMINEADKDGDGEINEEEFLHIMKKTSLY 188
+++ N D + DG I +EE L IMK S+Y
Sbjct: 166 KLKWAFNLYDINKDGCITKEEMLAIMK--SIY 195
>pdb|3AAJ|A Chain A, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
pdb|3AAJ|B Chain B, Crystal Structure Of Ca2+-Bound Form Of
Des3-23alg-2deltagf122
Length = 167
Score = 32.3 bits (72), Expect = 0.17, Method: Compositional matrix adjust.
Identities = 24/103 (23%), Positives = 40/103 (38%), Gaps = 13/103 (12%)
Query: 37 PKFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDN 96
+F + + D Q F +D++ +G I ELK A+ G+
Sbjct: 61 SEFTGVWKYITDWQNVFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKFDRQG 118
Query: 97 SGLLTYKDFLH--LVTQKMADKDSKEEILKAFRLFDEDNTGKI 137
G + + DF+ +V Q++ D FR +D D G I
Sbjct: 119 RGQIAFDDFIQGCIVLQRLTD---------IFRRYDTDQDGWI 152
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 30/133 (22%), Positives = 56/133 (42%), Gaps = 10/133 (7%)
Query: 49 IQEAFALFDKEGTGSISTKELKIAMRALGFEPXX-XXXXXXXXXXXXDNSGLLTYKDFLH 107
+ F DK+ +G IS EL+ A+ + P +N + + +F
Sbjct: 6 LWNVFQRVDKDRSGVISDTELQQALSNGTWTPFNPVTVRSIISMFDRENKAGVNFSEFTG 65
Query: 108 LVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADK 167
V + + D + FR +D DN+G I L+ G ++D+ +I + D+
Sbjct: 66 -VWKYITDWQN------VFRTYDRDNSGMIDKNELKQALS--GYRLSDQFHDILIRKFDR 116
Query: 168 DGDGEINEEEFLH 180
G G+I ++F+
Sbjct: 117 QGRGQIAFDDFIQ 129
>pdb|1OMD|A Chain A, Structure Of Oncomodulin Refined At 1.85 Angstroms
Resolution. An Example Of Extensive Molecular
Aggregation Via Ca2+
pdb|1RRO|A Chain A, Refinement Of Recombinant Oncomodulin At 1.30 Angstroms
Resolution
pdb|2NLN|A Chain A, Solution Structure Of Calcium-Free Rat Beta-Parvalbumin
Length = 108
Score = 32.3 bits (72), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 22/72 (30%), Positives = 35/72 (48%), Gaps = 11/72 (15%)
Query: 118 SKEEILKAFRLFDEDNTG-------KISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
S ++ FR D D +G K +S A EL E+ E + +++ AD DGD
Sbjct: 39 SASQVKDIFRFIDNDQSGYLDGDELKYFLQKFQSDARELTES----ETKSLMDAADNDGD 94
Query: 171 GEINEEEFLHIM 182
G+I +EF ++
Sbjct: 95 GKIGADEFQEMV 106
>pdb|1TTX|A Chain A, Solution Stucture Of Human Beta Parvalbumin (Oncomodulin)
Refined With A Paramagnetism Based Strategy
Length = 109
Score = 32.0 bits (71), Expect = 0.19, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 34/74 (45%), Gaps = 11/74 (14%)
Query: 116 KDSKEEILKAFRLFDEDNTG-------KISFANLRSVAVELGENIADEEIQEMINEADKD 168
K S ++ FR D D +G K S A EL E+ E + ++ AD D
Sbjct: 38 KMSANQVKDVFRFIDNDQSGYLDEEELKFFLQKFESGARELTES----ETKSLMAAADND 93
Query: 169 GDGEINEEEFLHIM 182
GDG+I EEF ++
Sbjct: 94 GDGKIGAEEFQEMV 107
>pdb|2KYC|A Chain A, Solution Structure Of Ca-Free Chicken Parvalbumin 3 (Cpv3)
pdb|2KYF|A Chain A, Solution Structure Of Calcium-Bound Cpv3
Length = 108
Score = 32.0 bits (71), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 22/71 (30%), Positives = 35/71 (49%), Gaps = 3/71 (4%)
Query: 116 KDSKEEILKAFRLFDEDNTGKISFANLRSV--AVELGENI-ADEEIQEMINEADKDGDGE 172
K S ++ + FR+ D D +G I L+ E G + E + + AD DGDG+
Sbjct: 37 KKSSSQLKEIFRILDNDQSGFIEEDELKYFLQRFESGARVLTASETKTFLAAADHDGDGK 96
Query: 173 INEEEFLHIMK 183
I EEF +++
Sbjct: 97 IGAEEFQEMVQ 107
>pdb|1G8I|A Chain A, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|1G8I|B Chain B, Crystal Structure Of Human Frequenin (Neuronal Calcium
Sensor 1)
pdb|2LCP|A Chain A, Nmr Structure Of Calcium Loaded, Un-Myristoylated Human
Ncs-1
Length = 190
Score = 31.6 bits (70), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 17/58 (29%), Positives = 25/58 (43%)
Query: 125 AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLHIM 182
F +FDE+ G+I F+ DE+++ D D DG I E L I+
Sbjct: 68 VFNVFDENKDGRIEFSEFIQALSVTSRGTLDEKLRWAFKLYDLDNDGYITRNEMLDIV 125
Score = 29.3 bits (64), Expect = 1.5, Method: Compositional matrix adjust.
Identities = 24/88 (27%), Positives = 41/88 (46%), Gaps = 19/88 (21%)
Query: 120 EEILKAFRLFDEDNTGKISFANLRSVA----------VELGE--NIADEEIQEMINEADK 167
E++ AF+L+D DN G I+ + + VEL E N ++ + + DK
Sbjct: 99 EKLRWAFKLYDLDNDGYITRNEMLDIVDAIYQMVGNTVELPEEENTPEKRVDRIFAMMDK 158
Query: 168 DGDGEINEEEFLH-------IMKKTSLY 188
+ DG++ +EF I++ SLY
Sbjct: 159 NADGKLTLQEFQEGSKADPSIVQALSLY 186
>pdb|2ZFD|A Chain A, The Crystal Structure Of Plant Specific Calcium Binding
Protein Atcbl2 In Complex With The Regulatory Domain Of
Atcipk14
Length = 226
Score = 31.6 bits (70), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 96 NSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAV----ELGE 151
++G+L +++F ++ + ++I +F+L+D G I ++ + V E G
Sbjct: 98 HNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGM 157
Query: 152 NIADEEIQEMIN----EADKDGDGEINEEEF 178
N+ D I+++I+ EAD DG+I++EE+
Sbjct: 158 NLKDTVIEDIIDKTFEEADTKHDGKIDKEEW 188
>pdb|1UHN|A Chain A, The Crystal Structure Of The Calcium Binding Protein
Atcbl2 From Arabidopsis Thaliana
Length = 189
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 24/91 (26%), Positives = 50/91 (54%), Gaps = 8/91 (8%)
Query: 96 NSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAV----ELGE 151
++G+L +++F ++ + ++I +F+L+D G I ++ + V E G
Sbjct: 67 HNGILGFEEFARALSVFHPNAPIDDKIHFSFQLYDLKQQGFIERQEVKQMVVATLAESGM 126
Query: 152 NIADEEIQEMIN----EADKDGDGEINEEEF 178
N+ D I+++I+ EAD DG+I++EE+
Sbjct: 127 NLKDTVIEDIIDKTFEEADTKHDGKIDKEEW 157
>pdb|1OMV|A Chain A, Non-Myristoylated Bovine Recoverin (E85q Mutant) With
Calcium Bound To Ef-Hand 3
Length = 201
Score = 31.6 bits (70), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 40/86 (46%)
Query: 97 SGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADE 156
SG +T ++F + ++ + D K FR FD ++ G + F ++
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQ 99
Query: 157 EIQEMINEADKDGDGEINEEEFLHIM 182
+++ + D DG+G I++ E L I+
Sbjct: 100 KLEWAFSLYDVDGNGTISKNEVLEIV 125
>pdb|1LA3|A Chain A, Solution Structure Of Recoverin Mutant, E85q
Length = 201
Score = 31.6 bits (70), Expect = 0.27, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 40/86 (46%)
Query: 97 SGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADE 156
SG +T ++F + ++ + D K FR FD ++ G + F ++
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKQYVIALHMTSAGKTNQ 99
Query: 157 EIQEMINEADKDGDGEINEEEFLHIM 182
+++ + D DG+G I++ E L I+
Sbjct: 100 KLEWAFSLYDVDGNGTISKNEVLEIV 125
>pdb|1QXP|A Chain A, Crystal Structure Of A Mu-Like Calpain
pdb|1QXP|B Chain B, Crystal Structure Of A Mu-Like Calpain
Length = 900
Score = 31.6 bits (70), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 22/102 (21%), Positives = 46/102 (45%), Gaps = 8/102 (7%)
Query: 38 KFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNS 97
+F + ++ + F FD + +GS+S E+++A+ A GF+ D+
Sbjct: 598 EFNILWNRIRNYLTIFRKFDLDKSGSMSAYEMRMAIEAAGFK-LPCQLHQVIVARFADDE 656
Query: 98 GLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISF 139
++ + +F+ + + E + K F+ D +NTG I
Sbjct: 657 LIIDFDNFVRCLVR-------LEILFKIFKQLDPENTGTIQL 691
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 43/100 (43%), Gaps = 8/100 (8%)
Query: 38 KFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNS 97
+F+ + Q + F+ + +G+I + EL A A GF D +
Sbjct: 795 EFKYLWNNIKKWQGIYKRFETDRSGTIGSNELPGAFEAAGFH-LNQHIYSMIIRRYSDET 853
Query: 98 GLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKI 137
G + + +F+ + + A + +AFR D++ TG+I
Sbjct: 854 GNMDFDNFISCLVRLDA-------MFRAFRSLDKNGTGQI 886
>pdb|2HET|A Chain A, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|B Chain B, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|C Chain C, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
pdb|2HET|D Chain D, Non-Myristoylated Bovine Recoverin (Truncated At
C-Terminus) With Calcium Bound To Ef-Hand 3
Length = 189
Score = 31.2 bits (69), Expect = 0.32, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 40/86 (46%)
Query: 97 SGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADE 156
SG +T ++F + ++ + D K FR FD ++ G + F ++
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQ 99
Query: 157 EIQEMINEADKDGDGEINEEEFLHIM 182
+++ + D DG+G I++ E L I+
Sbjct: 100 KLEWAFSLYDVDGNGTISKNEVLEIV 125
>pdb|2I94|A Chain A, Nmr Structure Of Recoverin Bound To Rhodopsin Kinase
Length = 202
Score = 31.2 bits (69), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 40/86 (46%)
Query: 97 SGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADE 156
SG +T ++F + ++ + D K FR FD ++ G + F ++
Sbjct: 41 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQ 100
Query: 157 EIQEMINEADKDGDGEINEEEFLHIM 182
+++ + D DG+G I++ E L I+
Sbjct: 101 KLEWAFSLYDVDGNGTISKNEVLEIV 126
>pdb|1OMR|A Chain A, Non-Myristoylated Wild-Type Bovine Recoverin With Calcium
Bound To Ef- Hand 3
pdb|1REC|A Chain A, Three-Dimensional Structure Of Recoverin, A Calcium Sensor
In Vision
pdb|1IKU|A Chain A, Myristoylated Recoverin In The Calcium-Free State, Nmr, 22
Structures
Length = 201
Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 40/86 (46%)
Query: 97 SGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADE 156
SG +T ++F + ++ + D K FR FD ++ G + F ++
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQ 99
Query: 157 EIQEMINEADKDGDGEINEEEFLHIM 182
+++ + D DG+G I++ E L I+
Sbjct: 100 KLEWAFSLYDVDGNGTISKNEVLEIV 125
>pdb|1DVI|A Chain A, Calpain Domain Vi With Calcium Bound
pdb|1DVI|B Chain B, Calpain Domain Vi With Calcium Bound
Length = 184
Score = 31.2 bits (69), Expect = 0.35, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 8/100 (8%)
Query: 38 KFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNS 97
+F+ + Q + FD + +G+I + EL A A GF D +
Sbjct: 79 EFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFH-LNQHIYSMIIRRYSDET 137
Query: 98 GLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKI 137
G + + +F+ + + A + +AFR D++ TG+I
Sbjct: 138 GNMDFDNFISCLVRLDA-------MFRAFRSLDKNGTGQI 170
>pdb|1JSA|A Chain A, Myristoylated Recoverin With Two Calciums Bound, Nmr, 24
Structures
Length = 201
Score = 31.2 bits (69), Expect = 0.36, Method: Compositional matrix adjust.
Identities = 20/86 (23%), Positives = 40/86 (46%)
Query: 97 SGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADE 156
SG +T ++F + ++ + D K FR FD ++ G + F ++
Sbjct: 40 SGRITRQEFQTIYSKFFPEADPKAYAQHVFRSFDANSDGTLDFKEYVIALHMTSAGKTNQ 99
Query: 157 EIQEMINEADKDGDGEINEEEFLHIM 182
+++ + D DG+G I++ E L I+
Sbjct: 100 KLEWAFSLYDVDGNGTISKNEVLEIV 125
>pdb|1DF0|B Chain B, Crystal Structure Of M-Calpain
pdb|1U5I|B Chain B, Crystal Structure Analysis Of Rat M-Calpain Mutant Lys10
Thr
pdb|3DF0|B Chain B, Calcium-Dependent Complex Between M-Calpain And
Calpastatin
pdb|3BOW|B Chain B, Structure Of M-Calpain In Complex With Calpastatin
Length = 184
Score = 31.2 bits (69), Expect = 0.37, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 8/100 (8%)
Query: 38 KFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNS 97
+F+ + Q + FD + +G+I + EL A A GF D +
Sbjct: 79 EFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFH-LNQHIYSMIIRRYSDET 137
Query: 98 GLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKI 137
G + + +F+ + + A + +AFR D++ TG+I
Sbjct: 138 GNMDFDNFISCLVRLDA-------MFRAFRSLDKNGTGQI 170
>pdb|3E3R|A Chain A, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
pdb|3E3R|B Chain B, Crystal Structure And Biochemical Characterization Of
Recombinant Human Calcyphosine Delineates A Novel
Ef-hand-containing Protein Family
Length = 204
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 15/62 (24%), Positives = 30/62 (48%)
Query: 122 ILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLHI 181
+ + FR D D + + R +LG + E + + + D++G G ++ EEFL
Sbjct: 39 LARFFRQLDRDGSRSLDADEFRQGLAKLGLVLDQAEAEGVCRKWDRNGSGTLDLEEFLRA 98
Query: 182 MK 183
++
Sbjct: 99 LR 100
>pdb|2KQY|A Chain A, Solution Structure Of Avian Thymic Hormone
Length = 108
Score = 31.2 bits (69), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 14/89 (15%)
Query: 102 YKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTG-------KISFANLRSVAVELGENIA 154
YK F V ++ K + ++I K F + D+D +G ++ N S A L
Sbjct: 26 YKSFFSTV--GLSSK-TPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVL----T 78
Query: 155 DEEIQEMINEADKDGDGEINEEEFLHIMK 183
E + + D DGDG+I EEF ++K
Sbjct: 79 SAETKAFLAAGDTDGDGKIGVEEFQSLVK 107
>pdb|1FPW|A Chain A, Structure Of Yeast Frequenin
pdb|2JU0|A Chain A, Structure Of Yeast Frequenin Bound To Pdtins 4-Kinase
Length = 190
Score = 31.2 bits (69), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 24/96 (25%), Positives = 51/96 (53%), Gaps = 13/96 (13%)
Query: 95 DNSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVA-------- 146
DN+G + +++F+ +++ + +E++ AF L+D ++ G I+F + ++
Sbjct: 75 DNNGFIHFEEFITVLSTT-SRGTLEEKLSWAFELYDLNHDGYITFDEMLTIVASVYKMMG 133
Query: 147 --VELGENIADEE--IQEMINEADKDGDGEINEEEF 178
V L E+ A E ++++ DK+ DG I +EF
Sbjct: 134 SMVTLNEDEATPEMRVKKIFKLMDKNEDGYITLDEF 169
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 23/86 (26%), Positives = 37/86 (43%)
Query: 97 SGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADE 156
SG L +DF+ + Q ++ F +FD+DN G I F +V +E
Sbjct: 40 SGQLAREDFVKIYKQFFPFGSPEDFANHLFTVFDKDNNGFIHFEEFITVLSTTSRGTLEE 99
Query: 157 EIQEMINEADKDGDGEINEEEFLHIM 182
++ D + DG I +E L I+
Sbjct: 100 KLSWAFELYDLNHDGYITFDEMLTIV 125
>pdb|1IG5|A Chain A, Bovine Calbindin D9k Binding Mg2+
pdb|1IGV|A Chain A, Bovine Calbindin D9k Binding Mn2+
pdb|3ICB|A Chain A, The Refined Structure Of Vitamin D-Dependent Calcium-
Binding Protein From Bovine Intestine. Molecular
Details, Ion Binding, And Implications For The Structure
Of Other Calcium-Binding Proteins
Length = 75
Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 158 IQEMINEADKDGDGEINEEEFLHIMKKTS 186
+ E+ E DK+GDGE++ EEF ++KK S
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLVKKIS 74
>pdb|4ICB|A Chain A, Proline Cis-Trans Isomers In Calbindin D9k Observed By X-
Ray Crystallography
Length = 76
Score = 30.8 bits (68), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 158 IQEMINEADKDGDGEINEEEFLHIMKKTS 186
+ E+ E DK+GDGE++ EEF ++KK S
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKKIS 75
>pdb|3FS7|A Chain A, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|B Chain B, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|C Chain C, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|D Chain D, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|E Chain E, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|F Chain F, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|G Chain G, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
pdb|3FS7|H Chain H, Crystal Structure Of Gallus Gallus Beta-Parvalbumin (Avian
Thymic Hormone)
Length = 109
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 26/89 (29%), Positives = 41/89 (46%), Gaps = 14/89 (15%)
Query: 102 YKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTG-------KISFANLRSVAVELGENIA 154
YK F V ++ K + ++I K F + D+D +G ++ N S A L
Sbjct: 27 YKSFFSTV--GLSSK-TPDQIKKVFGILDQDKSGFIEEEELQLFLKNFSSSARVL----T 79
Query: 155 DEEIQEMINEADKDGDGEINEEEFLHIMK 183
E + + D DGDG+I EEF ++K
Sbjct: 80 SAETKAFLAAGDTDGDGKIGVEEFQSLVK 108
>pdb|1KSM|A Chain A, Average Nmr Solution Structure Of Ca Ln Calbindin D9k
pdb|1KQV|A Chain A, Family Of Nmr Solution Structures Of Ca Ln Calbindin D9k
Length = 79
Score = 30.8 bits (68), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 158 IQEMINEADKDGDGEINEEEFLHIMKKTS 186
+ E+ E DK+GDGE++ EEF ++KK S
Sbjct: 50 LDELFEELDKNGDGEVSFEEFQVLVKKIS 78
>pdb|1N65|A Chain A, Family Of Nmr Solution Structures Of Ca Ce Calbindin D9k
In Denaturating Conditions
Length = 75
Score = 30.8 bits (68), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 158 IQEMINEADKDGDGEINEEEFLHIMKKTS 186
+ E+ E DK+GDGE++ EEF ++KK S
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLVKKIS 74
>pdb|2BCB|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
pdb|1B1G|A Chain A, Solvated Refinement Of Ca-Loaded Calbindin D9k
Length = 75
Score = 30.8 bits (68), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 158 IQEMINEADKDGDGEINEEEFLHIMKKTS 186
+ E+ E DK+GDGE++ EEF ++KK S
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLVKKIS 74
>pdb|3KPX|A Chain A, Crystal Structure Analysis Of Photoprotein Clytin
Length = 198
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 18/51 (35%), Positives = 22/51 (43%)
Query: 50 QEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
+ F +FDK+G+GSIS E K G P DNSG L
Sbjct: 119 EAVFDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKL 169
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 14/53 (26%), Positives = 27/53 (50%)
Query: 125 AFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEE 177
F +FD+D +G IS ++ G +DE+ ++ D D G+++ +E
Sbjct: 121 VFDIFDKDGSGSISLDEWKTYGGISGICPSDEDAEKTFKHCDLDNSGKLDVDE 173
>pdb|1CDN|A Chain A, Solution Structure Of (Cd2+)1-Calbindin D9k Reveals
Details Of The Stepwise Structural Changes Along The
Apo--> (Ca2+) Ii1--> (Ca2+)i,Ii2 Binding Pathway
pdb|1CLB|A Chain A, Determination Of The Solution Structure Of Apo Calbindin
D9k By Nmr Spectroscopy
pdb|2BCA|A Chain A, High-Resolution Solution Structure Of Calcium-Loaded
Calbindin D9k
Length = 76
Score = 30.8 bits (68), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 158 IQEMINEADKDGDGEINEEEFLHIMKKTS 186
+ E+ E DK+GDGE++ EEF ++KK S
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKKIS 75
>pdb|1HT9|A Chain A, Domain Swapping Ef-Hands
pdb|1HT9|B Chain B, Domain Swapping Ef-Hands
Length = 76
Score = 30.8 bits (68), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 158 IQEMINEADKDGDGEINEEEFLHIMKKTS 186
+ E+ E DK+GDGE++ EEF ++KK S
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKKIS 75
>pdb|1EL4|A Chain A, Structure Of The Calcium-Regulated Photoprotein Obelin
Determined By Sulfur Sas
Length = 195
Score = 30.8 bits (68), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 52 AFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
F +FDK+G+G+I+ E K + G P DNSG L
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDL 166
>pdb|1AJ5|A Chain A, Calpain Domain Vi Apo
pdb|1AJ5|B Chain B, Calpain Domain Vi Apo
Length = 173
Score = 30.8 bits (68), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 23/100 (23%), Positives = 43/100 (43%), Gaps = 8/100 (8%)
Query: 38 KFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNS 97
+F+ + Q + FD + +G+I + EL A A GF D +
Sbjct: 68 EFKYLWNNIKKWQGIYKRFDTDRSGTIGSNELPGAFEAAGFH-LNQHIYSMIIRRYSDET 126
Query: 98 GLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKI 137
G + + +F+ + + A + +AFR D++ TG+I
Sbjct: 127 GNMDFDNFISCLVRLDA-------MFRAFRSLDKNGTGQI 159
>pdb|1JF2|A Chain A, Crystal Structure Of W92f Obelin Mutant From Obelia
Longissima At 1.72 Angstrom Resolution
pdb|1S36|A Chain A, Crystal Structure Of A Ca2+-Discharged Photoprotein:
Implications For The Mechanisms Of The Calcium Trigger
And The Bioluminescence
Length = 195
Score = 30.8 bits (68), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 52 AFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
F +FDK+G+G+I+ E K + G P DNSG L
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDL 166
>pdb|1KCY|A Chain A, Nmr Solution Structure Of Apo Calbindin D9k (F36g + P43m
Mutant)
Length = 75
Score = 30.8 bits (68), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 158 IQEMINEADKDGDGEINEEEFLHIMKKTS 186
+ E+ E DK+GDGE++ EEF ++KK S
Sbjct: 46 LDELFEELDKNGDGEVSFEEFQVLVKKIS 74
>pdb|2F8P|A Chain A, Crystal Structure Of Obelin Following Ca2+ Triggered
Bioluminescence Suggests Neutral Coelenteramide As The
Primary Excited State
Length = 195
Score = 30.8 bits (68), Expect = 0.51, Method: Compositional matrix adjust.
Identities = 16/49 (32%), Positives = 22/49 (44%)
Query: 52 AFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
F +FDK+G+G+I+ E K + G P DNSG L
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNSGDL 166
>pdb|1BOD|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 74
Score = 30.4 bits (67), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 158 IQEMINEADKDGDGEINEEEFLHIMKKTS 186
+ E+ E DK+GDGE++ EEF ++KK S
Sbjct: 45 LDELFEELDKNGDGEVSFEEFQVLVKKIS 73
>pdb|1BOC|A Chain A, The Solution Structures Of Mutant Calbindin D9k's, As
Determined By Nmr, Show That The Calcium Binding Site
Can Adopt Different Folds
Length = 76
Score = 30.4 bits (67), Expect = 0.56, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 21/29 (72%)
Query: 158 IQEMINEADKDGDGEINEEEFLHIMKKTS 186
+ E+ E DK+GDGE++ EEF ++KK S
Sbjct: 47 LDELFEELDKNGDGEVSFEEFQVLVKKIS 75
>pdb|2JNX|A Chain A, Nmr Derived Solution Structure Of An Ef-Hand Calcium
Binding Protein From Entamoeba Histolytica
Length = 134
Score = 30.4 bits (67), Expect = 0.67, Method: Compositional matrix adjust.
Identities = 22/69 (31%), Positives = 38/69 (55%), Gaps = 6/69 (8%)
Query: 111 QKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
Q ++D+ +IL ++L D D GK++ + + + G E++ + I +AD +GD
Sbjct: 68 QDLSDEKVGLKIL--YKLMDADGDGKLTKEEVTTFFKKFGY----EKVVDQIMKADANGD 121
Query: 171 GEINEEEFL 179
G I EEFL
Sbjct: 122 GYITLEEFL 130
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/91 (28%), Positives = 48/91 (52%), Gaps = 6/91 (6%)
Query: 98 GLLTYKDFLHLVTQKMADKDSKEEILK-AFRLFDEDNTGKISFANLRSVAVELGE-NIAD 155
G ++Y++ V+ K K+ E++L+ F+ D D G+I A A + E +++D
Sbjct: 15 GSVSYEEVKAFVSSKRPIKN--EQLLQLIFKAIDIDGNGEIDLAEFTKFAAAVKEQDLSD 72
Query: 156 EEI--QEMINEADKDGDGEINEEEFLHIMKK 184
E++ + + D DGDG++ +EE KK
Sbjct: 73 EKVGLKILYKLMDADGDGKLTKEEVTTFFKK 103
>pdb|1CB1|A Chain A, Three-Dimensional Solution Structure Of Ca2+-Loaded
Porcine Calbindin D9k Determined By Nuclear Magnetic
Resonance Spectroscopy
Length = 78
Score = 30.4 bits (67), Expect = 0.69, Method: Compositional matrix adjust.
Identities = 13/29 (44%), Positives = 21/29 (72%)
Query: 158 IQEMINEADKDGDGEINEEEFLHIMKKTS 186
+ ++ E DK+GDGE++ EEF ++KK S
Sbjct: 49 LDDLFQELDKNGDGEVSFEEFQVLVKKIS 77
>pdb|1D1O|A Chain A, Cooperativity In Ef-Hand Ca2+-Binding Proteins: Evidence
Of Site-Site Communication From Binding-Induced Changes
In Structure And Dynamics Of N56a Calbindin D9k
Length = 75
Score = 30.0 bits (66), Expect = 0.84, Method: Compositional matrix adjust.
Identities = 14/29 (48%), Positives = 20/29 (68%)
Query: 158 IQEMINEADKDGDGEINEEEFLHIMKKTS 186
+ E+ E DK GDGE++ EEF ++KK S
Sbjct: 46 LDELFEELDKAGDGEVSFEEFQVLVKKIS 74
>pdb|1B9A|A Chain A, Parvalbumin (Mutation;d51a, F102w)
Length = 108
Score = 30.0 bits (66), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 20/73 (27%), Positives = 36/73 (49%), Gaps = 11/73 (15%)
Query: 118 SKEEILKAFRLFDEDNTG-------KISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
S +++ KAF + +D +G K+ N ++ A L D E + + D DGD
Sbjct: 39 SADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARAL----TDGETKTFLKAGDSDGD 94
Query: 171 GEINEEEFLHIMK 183
G+I +E+ ++K
Sbjct: 95 GKIGVDEWTALVK 107
>pdb|2D8N|A Chain A, Crystal Structure Of Human Recoverin At 2.2 A Resolution
Length = 207
Score = 30.0 bits (66), Expect = 0.89, Method: Compositional matrix adjust.
Identities = 22/89 (24%), Positives = 41/89 (46%), Gaps = 6/89 (6%)
Query: 97 SGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIA-- 154
+G +T + F + + D D K FR FD + G + F + + L A
Sbjct: 48 TGRITQQQFQSIYAKFFPDTDPKAYAQHVFRSFDSNLDGTLDF---KEYVIALHXTTAGK 104
Query: 155 -DEEIQEMINEADKDGDGEINEEEFLHIM 182
+++++ + D DG+G I++ E L I+
Sbjct: 105 TNQKLEWAFSLYDVDGNGTISKNEVLEIV 133
>pdb|1ALW|A Chain A, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALW|B Chain B, Inhibitor And Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|A Chain A, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1ALV|B Chain B, Calcium Bound Domain Vi Of Porcine Calpain
pdb|1NX0|A Chain A, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX0|B Chain B, Structure Of Calpain Domain 6 In Complex With Calpastatin
Dic
pdb|1NX1|A Chain A, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX1|B Chain B, Calpain Domain Vi Complexed With Calpastatin Inhibitory
Domain C (Dic)
pdb|1NX2|A Chain A, Calpain Domain Vi
pdb|1NX3|A Chain A, Calpain Domain Vi In Complex With The Inhibitor Pd150606
Length = 173
Score = 29.6 bits (65), Expect = 0.97, Method: Compositional matrix adjust.
Identities = 22/100 (22%), Positives = 42/100 (42%), Gaps = 8/100 (8%)
Query: 38 KFELTPEQVADIQEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNS 97
+F+ + Q + FD + +G+I + EL A A GF D
Sbjct: 68 EFKYLWNNIKKWQAIYKQFDVDRSGTIGSSELPGAFEAAGFH-LNEHLYSMIIRRYSDEG 126
Query: 98 GLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKI 137
G + + +F+ + + + + +AF+ D+D TG+I
Sbjct: 127 GNMDFDNFISCLVR-------LDAMFRAFKSLDKDGTGQI 159
>pdb|2I18|A Chain A, The Refined Structure Of C-Terminal Domain Of An Ef-Hand
Calcium Binding Protein From Entamoeba Histolytica
Length = 64
Score = 29.6 bits (65), Expect = 1.0, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 126 FRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFL 179
++L D D GK++ + S + G E++ E + +AD +GDG I EEFL
Sbjct: 11 YKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANGDGYITLEEFL 60
>pdb|2R2I|A Chain A, Myristoylated Guanylate Cyclase Activating Protein-1 With
Calcium Bound
Length = 198
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 26/92 (28%), Positives = 46/92 (50%), Gaps = 9/92 (9%)
Query: 102 YKDFLHLVTQ-KMADKDSKEEILKA-FRLFDEDNTGKISFANLRSVAVEL------GENI 153
Y DF+ V + K ++ L+ F+L+D D G I L ++ + E +
Sbjct: 68 YIDFMEYVAALSLVLKGKVDQKLRWYFKLYDVDGNGCIDRGELLNIIKAIRAINRCNEAM 127
Query: 154 ADEEIQEMI-NEADKDGDGEINEEEFLHIMKK 184
EE M+ ++ D +GDGE++ EEF+ ++K
Sbjct: 128 TAEEFTNMVFDKIDINGDGELSLEEFMEGVQK 159
>pdb|1QV0|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1QV1|A Chain A, Atomic Resolution Structure Of Obelin From Obelia
Longissima
pdb|1SL9|A Chain A, Obelin From Obelia Longissima
Length = 195
Score = 29.6 bits (65), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 52 AFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
F +FDK+G+G+I+ E K + G P DN+G L
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDNAGDL 166
>pdb|2KGR|A Chain A, Solution Structure Of Protein Itsn1 From Homo Sapiens.
Northeast Structural Genomics Consortium Target Hr5524a
Length = 111
Score = 29.3 bits (64), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 15/74 (20%), Positives = 37/74 (50%), Gaps = 2/74 (2%)
Query: 109 VTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKD 168
V + + S+ + + F D+ +G ++ R++ ++ ++ ++ + N +D D
Sbjct: 3 VAEWAVPQSSRLKYRQLFNSHDKTMSGHLTGPQARTILMQ--SSLPQAQLASIWNLSDID 60
Query: 169 GDGEINEEEFLHIM 182
DG++ EEF+ M
Sbjct: 61 QDGKLTAEEFILAM 74
>pdb|2GGZ|A Chain A, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
pdb|2GGZ|B Chain B, Crystal Structure Of Human Guanylate Cyclase Activating
Protein-3
Length = 211
Score = 29.3 bits (64), Expect = 1.4, Method: Compositional matrix adjust.
Identities = 18/83 (21%), Positives = 40/83 (48%)
Query: 97 SGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADE 156
SGL T +F L+ + ++ + + I + + FD + G + F + + + ++
Sbjct: 34 SGLQTLHEFKTLLGLQGLNQKANKHIDQVYNTFDTNKDGFVDFLEFIAAVNLIMQEKMEQ 93
Query: 157 EIQEMINEADKDGDGEINEEEFL 179
+++ D DG+G I++ E L
Sbjct: 94 KLKWYFKLYDADGNGSIDKNELL 116
Score = 28.5 bits (62), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 25/93 (26%), Positives = 48/93 (51%), Gaps = 7/93 (7%)
Query: 98 GLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSV-----AVELGEN 152
G + + +F+ V M +K ++++ F+L+D D G I L + A+ +
Sbjct: 72 GFVDFLEFIAAVNLIMQEK-MEQKLKWYFKLYDADGNGSIDKNELLDMFMAVQALNGQQT 130
Query: 153 IADEE-IQEMINEADKDGDGEINEEEFLHIMKK 184
++ EE I + ++ D + DGE+ EEF++ M K
Sbjct: 131 LSPEEFINLVFHKIDINNDGELTLEEFINGMAK 163
>pdb|1SL7|A Chain A, Crystal Structure Of Calcium-Loaded Apo-Obelin From Obelia
Longissima
Length = 195
Score = 28.9 bits (63), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 15/49 (30%), Positives = 22/49 (44%)
Query: 52 AFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLL 100
F +FDK+G+G+I+ E K + G P D+SG L
Sbjct: 118 VFDIFDKDGSGTITLDEWKAYGKISGISPSQEDCEATFRHCDLDDSGDL 166
>pdb|2NXQ|A Chain A, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|2NXQ|B Chain B, Crystal Structure Of Calcium Binding Protein 1 From
Entamoeba Histolytica: A Novel Arrangement Of Ef Hand
Motifs
pdb|3PX1|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3PX1|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Strontium
pdb|3QJK|A Chain A, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3QJK|B Chain B, Structure Of Calcium Binding Protein-1 From Entamoeba
Histolytica In Complex With Lead
pdb|3ULG|A Chain A, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
pdb|3ULG|B Chain B, Crystal Structure Of Calcium-Binding Protein-1 From
Entamoeba Histolytica In Complex With Barium
Length = 134
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 126 FRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFL 179
++L D D GK++ + S + G E++ E + +AD +GDG I EEFL
Sbjct: 81 YKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANGDGYITLEEFL 130
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 98 GLLTYKDFLHLVTQKMADKDSKEEILK-AFRLFDEDNTGKIS---FANLRSVAVELGENI 153
G ++Y++ V++K A K+ E++L+ F+ D D G+I FA +++ G+++
Sbjct: 15 GAVSYEEVKAFVSKKRAIKN--EQLLQLIFKSIDADGNGEIDQNEFAKFYG-SIQ-GQDL 70
Query: 154 ADEEI--QEMINEADKDGDGEINEEEFLHIMKKTSL 187
+D++I + + D DGDG++ +EE KK +
Sbjct: 71 SDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI 106
>pdb|1JFJ|A Chain A, Nmr Solution Structure Of An Ef-Hand Calcium Binding
Protein From Entamoeba Histolytica
pdb|1JFK|A Chain A, Minimum Energy Representative Structure Of A Calcium Bound
Ef-hand Protein From Entamoeba Histolytica
Length = 134
Score = 28.9 bits (63), Expect = 1.8, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%), Gaps = 4/54 (7%)
Query: 126 FRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFL 179
++L D D GK++ + S + G E++ E + +AD +GDG I EEFL
Sbjct: 81 YKLMDVDGDGKLTKEEVTSFFKKHGI----EKVAEQVMKADANGDGYITLEEFL 130
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 27/96 (28%), Positives = 54/96 (56%), Gaps = 10/96 (10%)
Query: 98 GLLTYKDFLHLVTQKMADKDSKEEILK-AFRLFDEDNTGKIS---FANLRSVAVELGENI 153
G ++Y++ V++K A K+ E++L+ F+ D D G+I FA +++ G+++
Sbjct: 15 GAVSYEEVKAFVSKKRAIKN--EQLLQLIFKSIDADGNGEIDQNEFAKFYG-SIQ-GQDL 70
Query: 154 ADEEI--QEMINEADKDGDGEINEEEFLHIMKKTSL 187
+D++I + + D DGDG++ +EE KK +
Sbjct: 71 SDDKIGLKVLYKLMDVDGDGKLTKEEVTSFFKKHGI 106
>pdb|1B8C|A Chain A, Parvalbumin
pdb|1B8C|B Chain B, Parvalbumin
pdb|1B8L|A Chain A, Calcium-Bound D51aE101DF102W TRIPLE MUTANT OF BETA CARP
Parvalbumin
Length = 108
Score = 28.9 bits (63), Expect = 1.9, Method: Compositional matrix adjust.
Identities = 19/73 (26%), Positives = 36/73 (49%), Gaps = 11/73 (15%)
Query: 118 SKEEILKAFRLFDEDNTG-------KISFANLRSVAVELGENIADEEIQEMINEADKDGD 170
S +++ KAF + +D +G K+ N ++ A L D E + + D DGD
Sbjct: 39 SADDVKKAFAIIAQDKSGFIEEDELKLFLQNFKADARAL----TDGETKTFLKAGDSDGD 94
Query: 171 GEINEEEFLHIMK 183
G+I +++ ++K
Sbjct: 95 GKIGVDDWTALVK 107
>pdb|1PON|B Chain B, Site Iii-Site Iv Troponin C Heterodimer, Nmr
Length = 36
Score = 28.9 bits (63), Expect = 2.0, Method: Compositional matrix adjust.
Identities = 11/31 (35%), Positives = 25/31 (80%)
Query: 153 IADEEIQEMINEADKDGDGEINEEEFLHIMK 183
+ +E+I++++ ++DK+ DG I+ +EFL +M+
Sbjct: 2 VTEEDIEDLMKDSDKNNDGRIDFDEFLKMME 32
>pdb|1GJY|A Chain A, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|B Chain B, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|C Chain C, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
pdb|1GJY|D Chain D, The X-Ray Structure Of The Sorcin Calcium Binding Domain
(Scbd) Provides Insight Into The Phosphorylation And
Calcium Dependent Processess
Length = 167
Score = 28.5 bits (62), Expect = 2.2, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 39/91 (42%), Gaps = 9/91 (9%)
Query: 50 QEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLHLV 109
++ F FD + +G++ +EL+ A+ +GF SG +T+ D++
Sbjct: 75 RQHFISFDSDRSGTVDPQELQKALTTMGFR--LNPQTVNSIAKRYSTSGKITFDDYIACC 132
Query: 110 TQKMADKDSKEEILKAFRLFDEDNTGKISFA 140
+ A DS FR D G ++F+
Sbjct: 133 VKLRALTDS-------FRRRDSAQQGMVNFS 156
>pdb|2EHB|A Chain A, The Structure Of The C-Terminal Domain Of The Protein
Kinase Atsos2 Bound To The Calcium Sensor Atsos3
Length = 207
Score = 28.1 bits (61), Expect = 2.7, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 96 NSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGEN--- 152
+G++ + +F+ + E++ AF+L+D TG I L+ + V L
Sbjct: 87 RNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESEL 146
Query: 153 -IADEEIQEMIN----EADKDGDGEINEEEF 178
++++ I+ M++ +AD+ DG+I+ +E+
Sbjct: 147 VLSEDMIEVMVDKAFVQADRKNDGKIDIDEW 177
>pdb|1V1F|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) And Manganese(Ii) Ions
pdb|1V1G|A Chain A, Structure Of The Arabidopsis Thaliana Sos3 Complexed With
Calcium(Ii) Ion
Length = 222
Score = 28.1 bits (61), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 21/91 (23%), Positives = 47/91 (51%), Gaps = 8/91 (8%)
Query: 96 NSGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGEN--- 152
+G++ + +F+ + E++ AF+L+D TG I L+ + V L
Sbjct: 87 RNGVIEFGEFVRSLGVFHPSAPVHEKVKFAFKLYDLRQTGFIEREELKEMVVALLHESEL 146
Query: 153 -IADEEIQEMIN----EADKDGDGEINEEEF 178
++++ I+ M++ +AD+ DG+I+ +E+
Sbjct: 147 VLSEDMIEVMVDKAFVQADRKNDGKIDIDEW 177
>pdb|1BJF|A Chain A, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
pdb|1BJF|B Chain B, Crystal Structure Of Recombinant Bovine Neurocalcin Delta
At 2.4 Angstroms
Length = 193
Score = 27.7 bits (60), Expect = 3.8, Method: Compositional matrix adjust.
Identities = 20/87 (22%), Positives = 38/87 (43%)
Query: 97 SGLLTYKDFLHLVTQKMADKDSKEEILKAFRLFDEDNTGKISFANLRSVAVELGENIADE 156
SG L+ ++F + D+ + FR FD + G I F ++
Sbjct: 40 SGHLSMEEFKKIYGNFFPYGDASKFAEHVFRTFDANGDGTIDFREFIIALSVTSRGKLEQ 99
Query: 157 EIQEMINEADKDGDGEINEEEFLHIMK 183
+++ + D DG+G I++ E L I++
Sbjct: 100 KLKWAFSMYDLDGNGYISKAEMLEIVQ 126
Score = 26.6 bits (57), Expect = 8.3, Method: Compositional matrix adjust.
Identities = 20/96 (20%), Positives = 46/96 (47%), Gaps = 15/96 (15%)
Query: 98 GLLTYKDFLHLVTQKMADKDSKEEILK-AFRLFDEDNTGKISFANLRSVAVEL------- 149
G + +++F+ + + + E+ LK AF ++D D G IS A + + +
Sbjct: 78 GTIDFREFI--IALSVTSRGKLEQKLKWAFSMYDLDGNGYISKAEMLEIVQAIYKMVSSV 135
Query: 150 -----GENIADEEIQEMINEADKDGDGEINEEEFLH 180
E+ ++ +++ + D + DG+++ EEF+
Sbjct: 136 MKMPEDESTPEKRTEKIFRQMDTNRDGKLSLEEFIR 171
>pdb|2HQ8|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
pdb|2HQ8|B Chain B, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri In The Ca Loaded Apo Form
Length = 186
Score = 27.7 bits (60), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 123 LKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFL 179
L + D D G +S ++ +G ++ D++ N D + +G+I+ +EFL
Sbjct: 105 LIMYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFL 161
>pdb|2HPS|A Chain A, Crystal Structure Of Coelenterazine-binding Protein From
Renilla Muelleri
Length = 186
Score = 27.7 bits (60), Expect = 4.4, Method: Compositional matrix adjust.
Identities = 14/57 (24%), Positives = 28/57 (49%)
Query: 123 LKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFL 179
L + D D G +S ++ +G ++ D++ N D + +G+I+ +EFL
Sbjct: 105 LIXYDCIDTDKDGYVSLPEFKAFLQAVGPDLTDDKAITCFNTLDFNKNGQISRDEFL 161
>pdb|3AKA|A Chain A, Structural Basis For Prokaryotic Calcium-Mediated
Regulation By A Streptomyces Coelicolor Calcium-Binding
Protein
Length = 166
Score = 27.3 bits (59), Expect = 4.8, Method: Compositional matrix adjust.
Identities = 21/76 (27%), Positives = 31/76 (40%), Gaps = 15/76 (19%)
Query: 119 KEEILKAFRLFDEDNTGKISFANLRSVAVEL------------GENI---ADEEIQEMIN 163
+ I F FD+D G I ++ A L G+ + A+ Q +
Sbjct: 3 ERRIAARFTTFDQDGNGHIDRSDFSGAAKALLAEFGVAARSDRGQALYGGAEALWQGLAG 62
Query: 164 EADKDGDGEINEEEFL 179
AD+DGD I EEF+
Sbjct: 63 IADRDGDQRITREEFV 78
Score = 27.3 bits (59), Expect = 5.1, Method: Compositional matrix adjust.
Identities = 35/154 (22%), Positives = 58/154 (37%), Gaps = 27/154 (17%)
Query: 49 IQEAFALFDKEGTGSISTKELKIAMRAL----GFEPXXXXXXXXXXXXXXDNSGL----- 99
I F FD++G G I + A +AL G GL
Sbjct: 6 IAARFTTFDQDGNGHIDRSDFSGAAKALLAEFGVAARSDRGQALYGGAEALWQGLAGIAD 65
Query: 100 ------LTYKDFLHLVTQKMADK-DSKEEILKAF-----RLFDEDNTGKISFANLRSVAV 147
+T ++F+ +++ DK D EI + F + D D G ++ A+
Sbjct: 66 RDGDQRITREEFVTGAVKRLRDKPDRFAEIARPFLHAALGVADTDGDGAVTVADTARALT 125
Query: 148 ELG--ENIADEEIQEMINEADKDGDGEINEEEFL 179
G E++A + + D DGDG++ E E +
Sbjct: 126 AFGVPEDLARQAAAAL----DTDGDGKVGETEIV 155
>pdb|2PNQ|A Chain A, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
pdb|2PNQ|B Chain B, Crystal Structure Of Pyruvate Dehydrogenase Phosphatase 1
(Pdp1)
Length = 467
Score = 27.3 bits (59), Expect = 5.7, Method: Compositional matrix adjust.
Identities = 15/37 (40%), Positives = 23/37 (62%), Gaps = 1/37 (2%)
Query: 97 SGLLTY-KDFLHLVTQKMADKDSKEEILKAFRLFDED 132
+GL TY ++ + L T + AD D KE ++ AF+ D D
Sbjct: 139 NGLRTYWQELIDLNTGESADIDVKEALINAFKRLDND 175
>pdb|1WLZ|A Chain A, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|B Chain B, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|C Chain C, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
pdb|1WLZ|D Chain D, Crystal Structure Of Djbp Fragment Which Was Obtained By
Limited Proteolysis
Length = 105
Score = 26.9 bits (58), Expect = 6.0, Method: Compositional matrix adjust.
Identities = 15/58 (25%), Positives = 25/58 (43%)
Query: 122 ILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFL 179
I + F FD T IS R++ + + DE+ + NE + G + +FL
Sbjct: 26 ITQEFENFDTMKTNTISREEFRAICNRRVQILTDEQFDRLWNEMPVNAKGRLKYPDFL 83
>pdb|1JUO|A Chain A, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
pdb|1JUO|B Chain B, Crystal Structure Of Calcium-Free Human Sorcin: A Member
Of The Penta-Ef-Hand Protein Family
Length = 198
Score = 26.9 bits (58), Expect = 6.5, Method: Compositional matrix adjust.
Identities = 20/90 (22%), Positives = 38/90 (42%), Gaps = 9/90 (10%)
Query: 50 QEAFALFDKEGTGSISTKELKIAMRALGFEPXXXXXXXXXXXXXXDNSGLLTYKDFLHLV 109
++ F FD + +G++ +EL+ A+ +GF +G +T+ D++
Sbjct: 106 RQHFISFDTDRSGTVDPQELQKALTTMGFR--LSPQAVNSIAKRYSTNGKITFDDYIACC 163
Query: 110 TQKMADKDSKEEILKAFRLFDEDNTGKISF 139
+ A DS FR D G ++F
Sbjct: 164 VKLRALTDS-------FRRRDTAQQGVVNF 186
>pdb|2KQ6|A Chain A, The Structure Of The Ef-Hand Domain Of Polycystin-2
Suggests Mechanism For Ca2+-Dependent Regulation Of
Polycystin-2 Cha Activity
Length = 78
Score = 26.6 bits (57), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 135 GKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEF 178
GK++F LR G+ D EI+ + + D+DGD E+ E E
Sbjct: 15 GKLNFDELRQDLK--GKGHTDAEIEAIFTKYDQDGDQELTEHEH 56
>pdb|2PMY|A Chain A, Ef-Hand Domain Of Human Rasef
pdb|2PMY|B Chain B, Ef-Hand Domain Of Human Rasef
Length = 91
Score = 26.6 bits (57), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 20/67 (29%), Positives = 30/67 (44%), Gaps = 4/67 (5%)
Query: 114 ADKDSKE--EILKAFRLFDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDG 171
AD D +E + F D + +G++ R++ EL AD E + D D DG
Sbjct: 19 ADGDGEELARLRSVFAACDANRSGRLEREEFRALCTELRVRPADAEA--VFQRLDADRDG 76
Query: 172 EINEEEF 178
I +EF
Sbjct: 77 AITFQEF 83
>pdb|2SAS|A Chain A, Structure Of A Sarcoplasmic Calcium-Binding Protein From
Amphioxus Refined At 2.4 Angstroms Resolution
Length = 185
Score = 26.6 bits (57), Expect = 9.5, Method: Compositional matrix adjust.
Identities = 16/57 (28%), Positives = 32/57 (56%), Gaps = 5/57 (8%)
Query: 129 FDEDNTGKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEFLHIMKKT 185
+ E N G +S A+ +S+ L ++E +++ AD + D ++ EE+L + +KT
Sbjct: 38 YKEVNKGSLSDADYKSMQASL-----EDEWRDLKGRADINKDDVVSWEEYLAMWEKT 89
>pdb|2KLD|A Chain A, Solution Structure Of The Calcium Binding Domain Of The C-
Terminal Cytosolic Domain Of Polycystin-2
pdb|2KLE|A Chain A, Isic Refined Solution Structure Of The Calcium Binding
Domain Of The C-Terminal Cytosolic Domain Of
Polycystin-2
Length = 123
Score = 26.6 bits (57), Expect = 9.6, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 24/44 (54%), Gaps = 2/44 (4%)
Query: 135 GKISFANLRSVAVELGENIADEEIQEMINEADKDGDGEINEEEF 178
GK++F LR G+ D EI+ + + D+DGD E+ E E
Sbjct: 61 GKLNFDELRQDLK--GKGHTDAEIEAIFTKYDQDGDQELTEHEH 102
Database: pdbaa
Posted date: Mar 3, 2013 10:34 PM
Number of letters in database: 14,973,337
Number of sequences in database: 62,578
Lambda K H
0.312 0.131 0.357
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 5,123,015
Number of Sequences: 62578
Number of extensions: 194035
Number of successful extensions: 1506
Number of sequences better than 100.0: 337
Number of HSP's better than 100.0 without gapping: 294
Number of HSP's successfully gapped in prelim test: 43
Number of HSP's that attempted gapping in prelim test: 474
Number of HSP's gapped (non-prelim): 630
length of query: 188
length of database: 14,973,337
effective HSP length: 93
effective length of query: 95
effective length of database: 9,153,583
effective search space: 869590385
effective search space used: 869590385
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 48 (23.1 bits)