BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13262
(229 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|193659736|ref|XP_001943561.1| PREDICTED: hypothetical protein LOC100164562 [Acyrthosiphon pisum]
Length = 287
Score = 135 bits (339), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 72/114 (63%), Positives = 86/114 (75%), Gaps = 8/114 (7%)
Query: 1 MNKQVFQSFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADM----WRESAFFLR 56
M KQVF+SF PD+KPI+ + +IEDI KCP+GY ISKT DQD+DAD+ W+ES F R
Sbjct: 1 MIKQVFKSF-PDNKPISGLCIIEDITKCPTGYNPISKTHDQDSDADLHMQSWKESVFIGR 59
Query: 57 K-TRYLCVSKTESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQGQICER 109
K TRYLC+SKTE + DYIV NI IINEKE PPDG+CLI RT+DSDQ +R
Sbjct: 60 KITRYLCLSKTEGIS--DYIVVNINIINEKECPPDGYCLIPRTIDSDQKAWRKR 111
>gi|307211218|gb|EFN87418.1| Protein FAM125B [Harpegnathos saltator]
Length = 324
Score = 127 bits (320), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 64/134 (47%), Positives = 91/134 (67%), Gaps = 8/134 (5%)
Query: 6 FQSFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKT-RYLCVS 64
+ +PDD+PITAI+V+ED+ KCP +TV+S+T DQDTDAD+WRES F++K RY+C S
Sbjct: 14 LSAVLPDDRPITAISVVEDVDKCPPNFTVVSRTYDQDTDADLWRESGLFIKKKGRYICFS 73
Query: 65 KTESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQ-----GQICERGGVVDYKPQQ 119
KTE Q D +VE+I +INE++TPP+G+C+I+ T+DS Q Q+C + D +
Sbjct: 74 KTEG--QPDCVVEDIVVINERDTPPEGYCMISYTVDSRQRAWRKKQVCYKLRNKDLCEKA 131
Query: 120 SNNTIFSQRNILKD 133
+ I R I KD
Sbjct: 132 VTDIIICSRIIHKD 145
>gi|218749841|ref|NP_001106142.2| uncharacterized protein LOC551408 [Apis mellifera]
Length = 324
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 78/99 (78%), Gaps = 3/99 (3%)
Query: 6 FQSFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKT-RYLCVS 64
S +PDD+PITAI+V+EDI KCP +TV+S+T DQDTDAD+WRES F++K RY+C S
Sbjct: 15 LSSVLPDDRPITAISVVEDIDKCPPNFTVVSRTYDQDTDADLWRESGLFIKKKGRYICFS 74
Query: 65 KTESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQ 103
KTE L Q +VE+I +INE++TPP+G+ +I+ T+DS Q
Sbjct: 75 KTEGLPQC--VVEDIAVINERDTPPEGYSIISYTVDSMQ 111
>gi|380013740|ref|XP_003690907.1| PREDICTED: LOW QUALITY PROTEIN: multivesicular body subunit
12B-like [Apis florea]
Length = 351
Score = 123 bits (309), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 78/99 (78%), Gaps = 3/99 (3%)
Query: 6 FQSFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKT-RYLCVS 64
S +PDD+PITAI+V+EDI KCP +TV+S+T DQDTDAD+WRES F++K RY+C S
Sbjct: 42 LSSVLPDDRPITAISVVEDIDKCPPNFTVVSRTYDQDTDADLWRESGLFIKKKGRYICFS 101
Query: 65 KTESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQ 103
KTE L Q +VE+I +INE++TPP+G+ +I+ T+DS Q
Sbjct: 102 KTEGLPQC--VVEDIAVINERDTPPEGYSIISYTVDSMQ 138
>gi|194477810|tpg|DAA06289.1| TPA_exp: unknown [Apis mellifera]
gi|218670125|gb|ABU68672.2| hypothetical protein [Apis mellifera]
Length = 193
Score = 122 bits (307), Expect = 8e-26, Method: Compositional matrix adjust.
Identities = 57/99 (57%), Positives = 78/99 (78%), Gaps = 3/99 (3%)
Query: 6 FQSFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKT-RYLCVS 64
S +PDD+PITAI+V+EDI KCP +TV+S+T DQDTDAD+WRES F++K RY+C S
Sbjct: 15 LSSVLPDDRPITAISVVEDIDKCPPNFTVVSRTYDQDTDADLWRESGLFIKKKGRYICFS 74
Query: 65 KTESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQ 103
KTE L Q +VE+I +INE++TPP+G+ +I+ T+DS Q
Sbjct: 75 KTEGLPQC--VVEDIAVINERDTPPEGYSIISYTVDSMQ 111
>gi|340729074|ref|XP_003402833.1| PREDICTED: multivesicular body subunit 12B [Bombus terrestris]
Length = 329
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 77/99 (77%), Gaps = 3/99 (3%)
Query: 6 FQSFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKT-RYLCVS 64
S +PDD+PITAI ++EDI KCP +TV+S+T DQDTDAD+WRES F++K RY+C S
Sbjct: 15 LSSVLPDDRPITAINIVEDIDKCPPNFTVVSRTYDQDTDADLWRESGLFIKKKGRYICFS 74
Query: 65 KTESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQ 103
KTE L Q +VE+I +INE++TPP+G+ +I+ T+DS Q
Sbjct: 75 KTEGLPQC--VVEDIVVINERDTPPEGYSIISYTVDSMQ 111
>gi|322801820|gb|EFZ22397.1| hypothetical protein SINV_01966 [Solenopsis invicta]
Length = 328
Score = 121 bits (304), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 62/132 (46%), Positives = 90/132 (68%), Gaps = 8/132 (6%)
Query: 8 SFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKT-RYLCVSKT 66
+ +PDD+PITAI+V+ED+ KCP +TV+S+T DQDTDAD+WRES F++K RY+C SKT
Sbjct: 16 AVLPDDRPITAISVVEDLDKCPPNFTVVSRTYDQDTDADLWRESGLFIKKKGRYICFSKT 75
Query: 67 ESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQ-----GQICERGGVVDYKPQQSN 121
E Q D +VE+I +INE++TPP+G+ +I+ T+D+ Q Q+C + D +
Sbjct: 76 EG--QPDCVVEDIVVINERDTPPEGYNMISYTVDTRQKAWRKKQVCYKIRNKDLCAKAVT 133
Query: 122 NTIFSQRNILKD 133
+ I R I KD
Sbjct: 134 DIIICSRIIHKD 145
>gi|350401490|ref|XP_003486169.1| PREDICTED: multivesicular body subunit 12B-like [Bombus impatiens]
Length = 329
Score = 120 bits (302), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/99 (56%), Positives = 77/99 (77%), Gaps = 3/99 (3%)
Query: 6 FQSFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKT-RYLCVS 64
S +PDD+PITAI ++EDI KCP +TV+S+T DQDTDAD+WRES F++K RY+C S
Sbjct: 15 LSSVLPDDRPITAINIVEDIDKCPPNFTVVSRTYDQDTDADLWRESGLFIKKKGRYICFS 74
Query: 65 KTESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQ 103
KTE L Q +VE+I +INE++TPP+G+ +I+ T+DS Q
Sbjct: 75 KTEGLPQC--VVEDIVVINERDTPPEGYSIISCTVDSMQ 111
>gi|332021467|gb|EGI61835.1| Multivesicular body subunit 12B [Acromyrmex echinatior]
Length = 352
Score = 120 bits (301), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 56/108 (51%), Positives = 82/108 (75%), Gaps = 8/108 (7%)
Query: 8 SFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKT-RYLCVSKT 66
+ +PDD+PITAI+V+ED+ KCP +TV+S+T DQDTDAD+WRES F++K RY+C SKT
Sbjct: 48 AVLPDDRPITAISVVEDLDKCPPNFTVVSRTYDQDTDADLWRESGLFIKKKGRYICFSKT 107
Query: 67 ESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQ-----GQICER 109
E Q + +VE+I +INE++TPP+G+ +I+ T+DS Q Q+C +
Sbjct: 108 EG--QPNCVVEDIMVINERDTPPEGYSMISYTVDSRQKAWRKKQVCYK 153
>gi|383857164|ref|XP_003704075.1| PREDICTED: multivesicular body subunit 12B-like [Megachile
rotundata]
Length = 329
Score = 120 bits (300), Expect = 6e-25, Method: Compositional matrix adjust.
Identities = 54/99 (54%), Positives = 77/99 (77%), Gaps = 3/99 (3%)
Query: 6 FQSFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKT-RYLCVS 64
+ +PDD+PIT+I V+EDI KCP +TV+S+T DQDTDAD+WRES F++K RY+C S
Sbjct: 15 LSAVLPDDRPITSIRVVEDIDKCPPNFTVVSRTYDQDTDADLWRESGLFIKKKGRYICFS 74
Query: 65 KTESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQ 103
KTE L Q +VE+I +INE+++PP+G+ +I+ T+DS Q
Sbjct: 75 KTEGLPQC--VVEDIVVINERDSPPEGYSMISNTVDSMQ 111
>gi|242024627|ref|XP_002432728.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212518213|gb|EEB19990.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 274
Score = 117 bits (293), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 54/101 (53%), Positives = 80/101 (79%), Gaps = 4/101 (3%)
Query: 4 QVFQSFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRK-TRYLC 62
QV+++ +PDD+PIT++ ++ED KCPSGYTV+S+T DQD+DAD+W+ES FF RK +RYLC
Sbjct: 3 QVYKA-LPDDRPITSLCIVEDPDKCPSGYTVVSRTYDQDSDADLWKESGFFGRKFSRYLC 61
Query: 63 VSKTESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQ 103
+SKT + DY+++++CIINEK+ P F +I +T D+ Q
Sbjct: 62 LSKT--VGTQDYVIQSLCIINEKDMAPQNFKMIPKTSDTKQ 100
>gi|307178246|gb|EFN67031.1| Protein FAM125B [Camponotus floridanus]
Length = 329
Score = 116 bits (290), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 53/97 (54%), Positives = 76/97 (78%), Gaps = 3/97 (3%)
Query: 8 SFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKT-RYLCVSKT 66
+ +PDD+PITAI+V+ED+ KCP +TV+S+T DQDTDAD+WRES F++K RY+C SKT
Sbjct: 15 AVLPDDRPITAISVVEDVDKCPPNFTVVSRTYDQDTDADLWRESGLFIKKKGRYICFSKT 74
Query: 67 ESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQ 103
E +VE+I +INE++TPP+G+ +I+ T+DS Q
Sbjct: 75 EG--PPGCVVEDIVVINERDTPPEGYNMISYTVDSRQ 109
>gi|156553334|ref|XP_001601036.1| PREDICTED: multivesicular body subunit 12B-like [Nasonia
vitripennis]
Length = 329
Score = 115 bits (289), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 54/105 (51%), Positives = 75/105 (71%), Gaps = 3/105 (2%)
Query: 6 FQSFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFL-RKTRYLCVS 64
S +PDD+PITAI +IED+ KCP +TV+S+T D D+DAD+WRES F+ +K+RY+C S
Sbjct: 14 LSSVLPDDRPITAINIIEDLDKCPPNFTVVSRTYDLDSDADLWRESGLFIKKKSRYICFS 73
Query: 65 KTESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQGQICER 109
KTE L ++E I II+E+E PP GF +I+ T+DS Q +R
Sbjct: 74 KTEGLPH--SVIEKILIIDEREPPPKGFSMISHTVDSMQKAWRKR 116
>gi|321462699|gb|EFX73720.1| hypothetical protein DAPPUDRAFT_307595 [Daphnia pulex]
Length = 252
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 50/130 (38%), Positives = 90/130 (69%), Gaps = 5/130 (3%)
Query: 3 KQVFQSF-IPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYL 61
K+++ + +PDD+P+TA+ V+ED KCP GYTV++K+ DQD DAD+W++ F R TRYL
Sbjct: 2 KELYNTLPLPDDRPVTALCVVEDPSKCPLGYTVVAKSHDQDLDADLWKDGFFGKRITRYL 61
Query: 62 CVSKTESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSN 121
C+SKTE ++++++C+IN+K+ PP+G+ L+++T ++Q +R + Y+ + N
Sbjct: 62 CLSKTEG--PSGFVIDSLCVINDKDAPPNGYVLLSKTYGTEQRAWRKRQ--LTYRLSEKN 117
Query: 122 NTIFSQRNIL 131
+ + +I+
Sbjct: 118 SVFLAITDII 127
>gi|194768104|ref|XP_001966153.1| GF19522 [Drosophila ananassae]
gi|190623038|gb|EDV38562.1| GF19522 [Drosophila ananassae]
Length = 356
Score = 112 bits (281), Expect = 9e-23, Method: Compositional matrix adjust.
Identities = 52/112 (46%), Positives = 79/112 (70%), Gaps = 6/112 (5%)
Query: 2 NKQVFQS---FIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRK- 57
N VF S F+PD++PIT++ ++ED ++CP ++ I++T DQD+DAD+WR+ + F R+
Sbjct: 44 NTNVFNSIMSFLPDNRPITSLHIVEDFERCPKNFSAINRTYDQDSDADLWRDYSLFGRQN 103
Query: 58 TRYLCVSKTESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQGQICER 109
TRYLC+SK+E L +Y+VE + +I EK PP F L++RT DSDQ +R
Sbjct: 104 TRYLCLSKSEGL--PEYVVETLQVIAEKTQPPKEFSLLSRTADSDQKAWRKR 153
>gi|195555285|ref|XP_002077067.1| GD24483 [Drosophila simulans]
gi|194203085|gb|EDX16661.1| GD24483 [Drosophila simulans]
Length = 442
Score = 111 bits (277), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 76/103 (73%), Gaps = 3/103 (2%)
Query: 8 SFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRK-TRYLCVSKT 66
SF+PD++PIT++ ++ED ++CP ++ IS+T DQD+DAD+WR+ + F R+ TRYLC+SK+
Sbjct: 50 SFLPDNRPITSLHIVEDFERCPKNFSAISRTYDQDSDADLWRDYSLFGRQNTRYLCLSKS 109
Query: 67 ESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQGQICER 109
E L +Y+VE + +I++K PP F ++RT DSDQ +R
Sbjct: 110 EGL--PEYVVETLQVISDKTPPPKEFSQVSRTADSDQKAWRKR 150
>gi|125981659|ref|XP_001354833.1| GA20171 [Drosophila pseudoobscura pseudoobscura]
gi|54643144|gb|EAL31888.1| GA20171 [Drosophila pseudoobscura pseudoobscura]
Length = 365
Score = 110 bits (276), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 75/103 (72%), Gaps = 3/103 (2%)
Query: 8 SFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRK-TRYLCVSKT 66
SF+PD++PIT++ +++D ++CP ++ I +T DQD DAD+WR+ + F R+ TRYLC+SK+
Sbjct: 56 SFLPDNRPITSLHIVQDFERCPKNFSAIHRTYDQDADADLWRDYSIFGRQNTRYLCLSKS 115
Query: 67 ESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQGQICER 109
E L DY+VE + +I +K TPP + L++RT DSDQ +R
Sbjct: 116 EGL--PDYVVETLQVIADKTTPPKEYSLLSRTADSDQKAWRKR 156
>gi|24642945|ref|NP_573268.1| CG7192, isoform A [Drosophila melanogaster]
gi|24642947|ref|NP_728135.1| CG7192, isoform B [Drosophila melanogaster]
gi|386764640|ref|NP_001245731.1| CG7192, isoform D [Drosophila melanogaster]
gi|22832475|gb|AAF48799.2| CG7192, isoform A [Drosophila melanogaster]
gi|22832476|gb|AAN09457.1| CG7192, isoform B [Drosophila melanogaster]
gi|54650842|gb|AAV37000.1| LD09680p [Drosophila melanogaster]
gi|220950394|gb|ACL87740.1| CG7192-PA [synthetic construct]
gi|383293463|gb|AFH07444.1| CG7192, isoform D [Drosophila melanogaster]
Length = 352
Score = 110 bits (275), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 76/103 (73%), Gaps = 3/103 (2%)
Query: 8 SFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRK-TRYLCVSKT 66
SF+PD++PIT++ ++ED ++CP ++ IS+T DQD+DAD+WR+ + F R+ TRYLC+SK+
Sbjct: 50 SFLPDNRPITSLHIVEDFERCPKNFSAISRTYDQDSDADLWRDYSLFGRQNTRYLCLSKS 109
Query: 67 ESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQGQICER 109
E L +Y+VE + +I++K PP F ++RT DSDQ +R
Sbjct: 110 EGL--PEYVVETLQVISDKTPPPKEFSQVSRTADSDQKAWRKR 150
>gi|194892267|ref|XP_001977630.1| GG18143 [Drosophila erecta]
gi|190649279|gb|EDV46557.1| GG18143 [Drosophila erecta]
Length = 352
Score = 109 bits (272), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 76/103 (73%), Gaps = 3/103 (2%)
Query: 8 SFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRK-TRYLCVSKT 66
SF+PD++PIT++ ++ED ++CP ++ I++T DQD+DAD+WR+ + F R+ TRYLC+SK+
Sbjct: 50 SFLPDNRPITSLHIVEDFERCPKNFSAINRTYDQDSDADLWRDYSLFGRQNTRYLCLSKS 109
Query: 67 ESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQGQICER 109
E L +Y+VE + +I++K PP F ++RT DSDQ +R
Sbjct: 110 EGL--PEYVVETLQVISDKTPPPKEFSQVSRTADSDQKAWRKR 150
>gi|195481239|ref|XP_002101571.1| GE15553 [Drosophila yakuba]
gi|194189095|gb|EDX02679.1| GE15553 [Drosophila yakuba]
Length = 352
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 47/103 (45%), Positives = 76/103 (73%), Gaps = 3/103 (2%)
Query: 8 SFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRK-TRYLCVSKT 66
SF+PD++PIT++ ++ED ++CP ++ I++T DQD+DAD+WR+ + F R+ TRYLC+SK+
Sbjct: 50 SFLPDNRPITSLHIVEDFERCPKNFSAINRTYDQDSDADLWRDYSLFGRQNTRYLCLSKS 109
Query: 67 ESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQGQICER 109
E L +Y+VE + +I++K PP F ++RT DSDQ +R
Sbjct: 110 EGL--PEYVVETLQVISDKTPPPKEFSQVSRTADSDQKAWRKR 150
>gi|195060259|ref|XP_001995775.1| GH17939 [Drosophila grimshawi]
gi|193896561|gb|EDV95427.1| GH17939 [Drosophila grimshawi]
Length = 377
Score = 108 bits (271), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/104 (46%), Positives = 72/104 (69%), Gaps = 4/104 (3%)
Query: 8 SFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRK--TRYLCVSK 65
SF+PD++PIT++ ++ED ++CP ++ I +T DQD DAD+WRE+ + TRYLC+SK
Sbjct: 62 SFLPDNRPITSLHIVEDFERCPKNFSAIHRTYDQDADADLWRENNLLFGRQTTRYLCLSK 121
Query: 66 TESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQGQICER 109
+E L +Y+VE + +I EK PP F L++RT DSDQ +R
Sbjct: 122 SEGL--PEYVVETLKVIAEKVPPPKEFSLLSRTADSDQKAWRKR 163
>gi|195345369|ref|XP_002039242.1| GM22836 [Drosophila sechellia]
gi|194134468|gb|EDW55984.1| GM22836 [Drosophila sechellia]
Length = 350
Score = 108 bits (270), Expect = 1e-21, Method: Compositional matrix adjust.
Identities = 48/103 (46%), Positives = 75/103 (72%), Gaps = 3/103 (2%)
Query: 8 SFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRK-TRYLCVSKT 66
SF+PD++PIT++ ++ED ++CP ++ IS+T DQD+DAD+WR+ + F R+ TRYLC+SK+
Sbjct: 50 SFLPDNRPITSLHIVEDFERCPKNFSAISRTYDQDSDADLWRDYSLFGRQNTRYLCLSKS 109
Query: 67 ESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQGQICER 109
E L +Y+VE + +I +K PP F ++RT DSDQ +R
Sbjct: 110 EGL--PEYVVETLQVILDKTPPPKEFSQVSRTADSDQKAWRKR 150
>gi|195130197|ref|XP_002009539.1| GI15409 [Drosophila mojavensis]
gi|193907989|gb|EDW06856.1| GI15409 [Drosophila mojavensis]
Length = 364
Score = 108 bits (269), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 51/112 (45%), Positives = 75/112 (66%), Gaps = 7/112 (6%)
Query: 3 KQVFQS---FIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRES--AFFLRK 57
K VF S F+PD++PIT++ ++ED ++CP + I +T DQD DAD+WRE+ F +
Sbjct: 43 KNVFNSIMSFLPDNRPITSLHIVEDFERCPKNFNAIHRTYDQDADADLWRENNILFGRQT 102
Query: 58 TRYLCVSKTESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQGQICER 109
TRYLC+SK+E L +Y+VE + +I EK PP F L++RT D+DQ +R
Sbjct: 103 TRYLCLSKSEGL--PEYVVETLKVIAEKVPPPKEFSLLSRTADTDQKAWRKR 152
>gi|195397545|ref|XP_002057389.1| GJ16368 [Drosophila virilis]
gi|194147156|gb|EDW62875.1| GJ16368 [Drosophila virilis]
Length = 359
Score = 105 bits (263), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/118 (42%), Positives = 77/118 (65%), Gaps = 13/118 (11%)
Query: 7 QSFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRES--AFFLRKTRYLCVS 64
++F+PD++PIT++ ++ED +CP + I +T DQD DAD+WRE+ F + TRYLC+S
Sbjct: 53 RNFLPDNRPITSLHIVEDFDRCPKNFNAIHRTYDQDADADLWRENNILFGRQTTRYLCLS 112
Query: 65 KTESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQG---------QICERGGVV 113
K+E L +Y+VE + +I EK PP F L++RT D+DQ ++ +RG VV
Sbjct: 113 KSEGL--PEYVVETLKVIAEKVPPPKEFSLLSRTADTDQKAWRKRQIAYKLSKRGTVV 168
>gi|195457106|ref|XP_002075428.1| GK17889 [Drosophila willistoni]
gi|194171513|gb|EDW86414.1| GK17889 [Drosophila willistoni]
Length = 372
Score = 105 bits (262), Expect = 1e-20, Method: Compositional matrix adjust.
Identities = 50/104 (48%), Positives = 74/104 (71%), Gaps = 4/104 (3%)
Query: 8 SFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRE-SAFFLRK-TRYLCVSK 65
SF+PD++PIT++ ++ED +CP ++ IS+T DQD DAD+WR+ + F R+ TRYLC+SK
Sbjct: 59 SFLPDNRPITSLHIVEDSDRCPKNFSAISRTYDQDADADLWRDYNILFGRQTTRYLCLSK 118
Query: 66 TESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQGQICER 109
+E L +Y+VE + +I EK PP F L++RT DSDQ +R
Sbjct: 119 SEGL--PEYVVETLKVIAEKVPPPKEFSLLSRTADSDQKAWRKR 160
>gi|157169428|ref|XP_001651512.1| hypothetical protein AaeL_AAEL005846 [Aedes aegypti]
gi|108878404|gb|EAT42629.1| AAEL005846-PA [Aedes aegypti]
Length = 300
Score = 100 bits (250), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 48/97 (49%), Positives = 70/97 (72%), Gaps = 3/97 (3%)
Query: 8 SFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKT-RYLCVSKT 66
S +PD++PIT++ ++ED +KCP + I+KT DQD DAD++RE+ F +++ RYLC SKT
Sbjct: 18 SVLPDNRPITSLQLVEDFEKCPKNFQPINKTYDQDQDADLFRENILFGKRSCRYLCQSKT 77
Query: 67 ESLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQ 103
E L DYI+E + +I EKE P+GF + RT DS+Q
Sbjct: 78 EGL--PDYILETLKVIGEKEALPEGFSQLTRTADSEQ 112
>gi|189241721|ref|XP_968780.2| PREDICTED: similar to aaa atpase [Tribolium castaneum]
Length = 841
Score = 100 bits (248), Expect = 5e-19, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
Query: 9 FIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTES 68
+P+DKPITAI VIE++ KCP G+ IS+T DQD DAD+ S F RYLCVSK+E
Sbjct: 86 LLPNDKPITAIQVIENLDKCPKGFHPISRTYDQDQDADLRESSIFKSSAARYLCVSKSEG 145
Query: 69 LFQIDYIVENICIINEKETPPDGFCLIARTLDSDQ 103
L +++++ + ++ EK PP GF L+ RT DS+Q
Sbjct: 146 L--PNFVIQELFVLTEKFNPPRGFSLLNRTADSEQ 178
>gi|158298058|ref|XP_318149.4| AGAP004695-PA [Anopheles gambiae str. PEST]
gi|157014625|gb|EAA13234.4| AGAP004695-PA [Anopheles gambiae str. PEST]
Length = 297
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 67/95 (70%), Gaps = 3/95 (3%)
Query: 10 IPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFF-LRKTRYLCVSKTES 68
+PD++P+T++ ++E+ +KCP+ + I+KT DQD DAD+WRE R TRYLC SK+E
Sbjct: 20 LPDNRPVTSLQLVEEFEKCPTNFQPINKTYDQDQDADLWREKLLIGKRTTRYLCQSKSEG 79
Query: 69 LFQIDYIVENICIINEKETPPDGFCLIARTLDSDQ 103
L YIVE + IINEKE P+GF + RT D++Q
Sbjct: 80 L--PGYIVETLKIINEKEIIPEGFSQLTRTADTEQ 112
>gi|270001206|gb|EEZ97653.1| hypothetical protein TcasGA2_TC016197 [Tribolium castaneum]
Length = 365
Score = 99.8 bits (247), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/95 (49%), Positives = 65/95 (68%), Gaps = 2/95 (2%)
Query: 9 FIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTES 68
+P+DKPITAI VIE++ KCP G+ IS+T DQD DAD+ S F RYLCVSK+E
Sbjct: 86 LLPNDKPITAIQVIENLDKCPKGFHPISRTYDQDQDADLRESSIFKSSAARYLCVSKSEG 145
Query: 69 LFQIDYIVENICIINEKETPPDGFCLIARTLDSDQ 103
L +++++ + ++ EK PP GF L+ RT DS+Q
Sbjct: 146 L--PNFVIQELFVLTEKFNPPRGFSLLNRTADSEQ 178
>gi|427785969|gb|JAA58436.1| Hypothetical protein [Rhipicephalus pulchellus]
Length = 255
Score = 95.9 bits (237), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/94 (46%), Positives = 62/94 (65%), Gaps = 4/94 (4%)
Query: 10 IPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL 69
+PDD PIT + VIED Q CP GY V+ KT DQDTDAD+W++ F R TRY+C SK
Sbjct: 9 LPDDLPITDVCVIEDPQNCPPGYHVVDKTFDQDTDADLWKDRFFGRRITRYICYSKAHHA 68
Query: 70 FQIDYIVENICIINEKETPPDGFCLIARTLDSDQ 103
V+++ ++ +KE PP+G+ ++ T D+DQ
Sbjct: 69 ----ECVQSLLVVADKEVPPEGYIVMNSTKDTDQ 98
>gi|442755343|gb|JAA69831.1| Hypothetical protein [Ixodes ricinus]
Length = 255
Score = 94.7 bits (234), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 64/94 (68%), Gaps = 4/94 (4%)
Query: 10 IPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL 69
+PDD PIT + ++ED Q CP GY V+ KT DQDTDAD+W++ F R TRY+C SK ++
Sbjct: 9 LPDDLPITDVCILEDPQNCPPGYHVVDKTFDQDTDADLWKDGFFGRRITRYICYSKAQNT 68
Query: 70 FQIDYIVENICIINEKETPPDGFCLIARTLDSDQ 103
++++ ++ +KE PP+G +++ T D+DQ
Sbjct: 69 ----ECIQSLVVVADKEMPPEGHVVMSATRDTDQ 98
Score = 38.5 bits (88), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 25/79 (31%), Positives = 38/79 (48%), Gaps = 11/79 (13%)
Query: 16 ITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESLFQIDYI 75
I ++ V+ D + P G+ V+S T D D A K ++LC KT S
Sbjct: 71 IQSLVVVADKEMPPEGHVVMSATRDTDQRA----------MKKKFLCF-KTVSRDYAGEA 119
Query: 76 VENICIINEKETPPDGFCL 94
V +I ++++ PPDGF L
Sbjct: 120 VSDIIVLSKSRKPPDGFVL 138
>gi|443704462|gb|ELU01524.1| hypothetical protein CAPTEDRAFT_222878 [Capitella teleta]
Length = 288
Score = 85.1 bits (209), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 66/106 (62%), Gaps = 7/106 (6%)
Query: 11 PDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESLF 70
PD+ PIT + V+ D KCP GY ++ ++ D++ D D+W++S F R RYLC+++ L
Sbjct: 6 PDNYPITGLCVVSDPNKCPPGYELLYRSHDRNEDCDLWKDSFFKSRVLRYLCITRAYPLS 65
Query: 71 Q--IDYIVENICIINEKETPPDGFCLIARTLDSDQ-----GQICER 109
Q ++ ++ +I I N++E PP GF L+ +T DS + QIC R
Sbjct: 66 QGKLNNVLADIVIQNDREIPPMGFTLLEKTQDSGEKATRKKQICVR 111
>gi|328718270|ref|XP_001946118.2| PREDICTED: DNA mismatch repair protein Msh6-like [Acyrthosiphon
pisum]
Length = 1185
Score = 84.7 bits (208), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 62/89 (69%), Gaps = 8/89 (8%)
Query: 136 QQGVCVPTFL-GLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
++ +C+PTF+ + P + +E YPC +G +++IPN T+IG+ +ED G
Sbjct: 904 EEVMCIPTFIPAIIGKKPLVELIEGRYPCGSGGESFIPNDTIIGK-EED------GTWNS 956
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+++L+TGPNMGGKST+MRQLG+IT++A M
Sbjct: 957 SLILVTGPNMGGKSTLMRQLGIITVMAHM 985
>gi|405958979|gb|EKC25057.1| DNA mismatch repair protein Msh6 [Crassostrea gigas]
Length = 1346
Score = 80.5 bits (197), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/76 (52%), Positives = 53/76 (69%), Gaps = 4/76 (5%)
Query: 152 PYISALESLYPCAT---GDQTYIPNSTVIGRCKE-DVESGGEGNRKPTVLLLTGPNMGGK 207
P++ E+ +PC T G +IPN TVIG E D+E G E N ++L+TGPNMGGK
Sbjct: 1072 PFVEIREARHPCVTRTFGGGDFIPNDTVIGIPDELDMEEGDEQNSSSKIVLVTGPNMGGK 1131
Query: 208 STVMRQLGLITILAQM 223
ST+MRQ+GLIT++AQM
Sbjct: 1132 STLMRQVGLITVMAQM 1147
>gi|291230668|ref|XP_002735287.1| PREDICTED: MVB (yeast MultiVesicular Body sorting factor) related
family member (mvb-12)-like [Saccoglossus kowalevskii]
Length = 491
Score = 79.3 bits (194), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 67/106 (63%), Gaps = 5/106 (4%)
Query: 1 MNKQVFQSFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKT-R 59
MN QS +P D PIT + ++ D +CP GY V+ +TV+ DAD+WR+ FF +KT R
Sbjct: 3 MNMSSLQSALPADYPITGLCIVADKSRCPPGYQVLDRTVEGQ-DADIWRD-GFFGKKTLR 60
Query: 60 YLCVSKTESLFQ--IDYIVENICIINEKETPPDGFCLIARTLDSDQ 103
Y C+++ L Q ++ ++ ++ I++++ PP G+ +A TLDS +
Sbjct: 61 YCCITRIFPLDQGRVNNVLADMAILSKENPPPVGWSTLATTLDSKE 106
>gi|300245003|gb|ADJ94082.1| hypothetical protein Ac_GB13727 [Apis cerana]
Length = 95
Score = 78.6 bits (192), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/67 (56%), Positives = 52/67 (77%), Gaps = 3/67 (4%)
Query: 38 TVDQDTDADMWRESAFFLRKT-RYLCVSKTESLFQIDYIVENICIINEKETPPDGFCLIA 96
T DQDTDAD+WRES F++K RY+C SKTE L Q +VE+I +INE++TPP+G+ +I+
Sbjct: 1 TYDQDTDADLWRESGLFIKKKGRYICFSKTEGLPQC--VVEDIAVINERDTPPEGYSIIS 58
Query: 97 RTLDSDQ 103
T+DS Q
Sbjct: 59 YTVDSMQ 65
>gi|300245017|gb|ADJ94089.1| hypothetical protein Eh_GB13727 [Euglossa hemichlora]
Length = 95
Score = 77.8 bits (190), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 51/65 (78%), Gaps = 3/65 (4%)
Query: 40 DQDTDADMWRESAFFLRKT-RYLCVSKTESLFQIDYIVENICIINEKETPPDGFCLIART 98
DQDTDAD+WRES F++K RY+C SKTE L Q +VE+I +INE++TPP+G+ +I+ T
Sbjct: 3 DQDTDADLWRESGLFIKKKGRYICFSKTEGLSQC--VVEDIVVINERDTPPEGYSIISYT 60
Query: 99 LDSDQ 103
+DS Q
Sbjct: 61 VDSMQ 65
>gi|300245007|gb|ADJ94084.1| hypothetical protein Ad_GB13727 [Apis dorsata]
Length = 95
Score = 77.0 bits (188), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 37/67 (55%), Positives = 52/67 (77%), Gaps = 3/67 (4%)
Query: 38 TVDQDTDADMWRESAFFLRKT-RYLCVSKTESLFQIDYIVENICIINEKETPPDGFCLIA 96
T DQDTDAD+WRES F++K RY+C SKTE L + +VE+I +INE++TPP+G+ +I+
Sbjct: 1 TYDQDTDADLWRESGLFIKKKGRYICFSKTEGLPRC--VVEDIAVINERDTPPEGYSIIS 58
Query: 97 RTLDSDQ 103
T+DS Q
Sbjct: 59 YTVDSMQ 65
>gi|300245011|gb|ADJ94086.1| hypothetical protein Bt_GB13727 [Bombus terrestris]
gi|300245019|gb|ADJ94090.1| hypothetical protein Mc_GB13727 [Melipona compressipes]
Length = 95
Score = 76.6 bits (187), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 51/65 (78%), Gaps = 3/65 (4%)
Query: 40 DQDTDADMWRESAFFLRKT-RYLCVSKTESLFQIDYIVENICIINEKETPPDGFCLIART 98
DQDTDAD+WRES F++K RY+C SKTE L Q +VE+I +INE++TPP+G+ +I+ T
Sbjct: 3 DQDTDADLWRESGLFIKKKGRYICFSKTEGLPQC--VVEDIVVINERDTPPEGYSIISYT 60
Query: 99 LDSDQ 103
+DS Q
Sbjct: 61 VDSMQ 65
>gi|411100670|gb|AFW03820.1| Mvb12 [Bombyx mori]
Length = 329
Score = 75.5 bits (184), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 66/101 (65%), Gaps = 6/101 (5%)
Query: 10 IPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRK-TRYLCVSKTES 68
+PD++P+ ++ ++E + KCP+GY +S+T D+D+DA + R++ F +K + Y+C+SK+E
Sbjct: 12 LPDERPVLSLQIVETVAKCPAGYWPVSRTYDEDSDAGLQRQNGLFGKKSSHYICLSKSEG 71
Query: 69 LFQIDYIVENICIINEKETPPDGFCLIARTLDSDQGQICER 109
+ Y+++ + +I + E P G+ + R + + ++C R
Sbjct: 72 V--PGYVMDGMAVIGDGELIPAGYSVAGR---AGKRRLCTR 107
>gi|324516700|gb|ADY46609.1| Multivesicular body subunit 12B [Ascaris suum]
Length = 273
Score = 75.1 bits (183), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 59/98 (60%), Gaps = 3/98 (3%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRES--AFFLRKTRYLCVSK-TESLFQ 71
PITAI ++ D KCP G+ I+KT D TDAD+W+ES +FF R RYL +S+ T S
Sbjct: 19 PITAIVIVADKNKCPRGFFPITKTHDDQTDADLWKESSFSFFSRPVRYLAISRETPSNMV 78
Query: 72 IDYIVENICIINEKETPPDGFCLIARTLDSDQGQICER 109
+V ++C++ + + P GF I T DS + + ++
Sbjct: 79 GVQVVTDLCVVKDTDPIPMGFIAIDYTADSKEKSLRKK 116
>gi|390334252|ref|XP_797647.3| PREDICTED: DNA mismatch repair protein Msh6-like [Strongylocentrotus
purpuratus]
Length = 1462
Score = 74.7 bits (182), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/92 (46%), Positives = 56/92 (60%), Gaps = 9/92 (9%)
Query: 139 VCVPTF-LGLEEPHPYISALESLYPC-----ATGDQTYIPNSTVIGRCKEDVESGGEGNR 192
+C P L E PYI+ +E +PC A GD YIPN T IG E+ G+GN
Sbjct: 1170 MCRPDIVLPSENEQPYIAIVEGRHPCIAHTFAGGD--YIPNDTFIGIVNENEMDEGDGNH 1227
Query: 193 -KPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ +L+TGPNMGGKST+MRQ GLI ++AQ+
Sbjct: 1228 GNSSCILVTGPNMGGKSTLMRQAGLIIVMAQL 1259
>gi|170580596|ref|XP_001895332.1| CG7192-PB [Brugia malayi]
gi|158597777|gb|EDP35824.1| CG7192-PB, putative [Brugia malayi]
Length = 285
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESA--FFLRKTRYLCVSKTESLFQI 72
PIT+I ++ D +CP G++ I+KT D+ DAD+WRES+ FF R RYL +++ I
Sbjct: 28 PITSIIIVADKNRCPRGFSPITKTFDEQNDADLWRESSFNFFSRPVRYLAITRDTPQNTI 87
Query: 73 D-YIVENICIINEKETPPDGFCLIARTLDSDQGQICER 109
++V ++C++ + + P GF I T DS + + ++
Sbjct: 88 STHVVTDLCVVKDSDPIPMGFIAIDYTADSKEKALRKK 125
>gi|402588499|gb|EJW82432.1| hypothetical protein WUBG_06658 [Wuchereria bancrofti]
Length = 277
Score = 74.3 bits (181), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 60/98 (61%), Gaps = 3/98 (3%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESA--FFLRKTRYLCVSKTESLFQI 72
PIT+I ++ D +CP G++ I+KT D+ DAD+WRES+ FF R RYL +++ I
Sbjct: 20 PITSIIIVADKNRCPRGFSPITKTFDEQNDADLWRESSFNFFSRPVRYLAITRGTPQNTI 79
Query: 73 D-YIVENICIINEKETPPDGFCLIARTLDSDQGQICER 109
++V ++C++ + + P GF I T DS + + ++
Sbjct: 80 STHVVTDLCVVKDSDPIPMGFIAIDYTADSKEKALRKK 117
>gi|405955168|gb|EKC22387.1| Multivesicular body subunit 12B [Crassostrea gigas]
Length = 293
Score = 73.9 bits (180), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/103 (33%), Positives = 60/103 (58%), Gaps = 1/103 (0%)
Query: 13 DKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESLFQI 72
D+PIT +A++ D +CP G+T+I +T D+ DAD+WR+ F + R+LCV K
Sbjct: 28 DRPITQVAIVADSTRCPPGFTLIDRTYDRRDDADLWRDGLFGRKVVRFLCVEKMPPSPGR 87
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDY 115
D +V+ + +I E++ P GF + T D+ + + ++ V Y
Sbjct: 88 DVLVD-VAVIGERDAIPAGFTCVDFTSDTREKAVKKKMLCVRY 129
>gi|393911638|gb|EFO18339.2| hypothetical protein LOAG_10157 [Loa loa]
Length = 280
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESA--FFLRKTRYLCVSKTESLFQI 72
PIT++ ++ D +CP +T I+KT D+ DAD+WRES+ FF R RYL VS+ +
Sbjct: 24 PITSVIIVADKNRCPRRFTPITKTFDEQNDADLWRESSFTFFSRPVRYLAVSRDTPQNTV 83
Query: 73 D-YIVENICIINEKETPPDGFCLIARTLDSDQGQI 106
++V ++C++ + + P GF I T DS + +
Sbjct: 84 STHVVTDLCVVKDSDPIPMGFIAIDYTADSKEKAL 118
>gi|312088108|ref|XP_003145732.1| hypothetical protein LOAG_10157 [Loa loa]
Length = 276
Score = 72.8 bits (177), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESA--FFLRKTRYLCVSKTESLFQI 72
PIT++ ++ D +CP +T I+KT D+ DAD+WRES+ FF R RYL VS+ +
Sbjct: 20 PITSVIIVADKNRCPRRFTPITKTFDEQNDADLWRESSFTFFSRPVRYLAVSRDTPQNTV 79
Query: 73 D-YIVENICIINEKETPPDGFCLIARTLDSDQGQI 106
++V ++C++ + + P GF I T DS + +
Sbjct: 80 STHVVTDLCVVKDSDPIPMGFIAIDYTADSKEKAL 114
>gi|392348628|ref|XP_002729643.2| PREDICTED: DNA mismatch repair protein Msh6-like [Rattus norvegicus]
Length = 1361
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 15/98 (15%)
Query: 135 YQQG----VCVPTFL-GLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVE 185
Y QG +C P L E+ HP++ S +PC T GD +IPN +IG C+ED E
Sbjct: 1066 YSQGGDGPMCRPVLLLPGEDTHPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEDAE 1123
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ G K +L+TGPNMGGKST++RQ GL+ ++AQM
Sbjct: 1124 ADG----KAYCVLVTGPNMGGKSTLIRQAGLLAVMAQM 1157
>gi|293347880|ref|XP_002726765.1| PREDICTED: DNA mismatch repair protein Msh6-like [Rattus norvegicus]
gi|149050458|gb|EDM02631.1| rCG61559 [Rattus norvegicus]
Length = 1361
Score = 72.8 bits (177), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 15/98 (15%)
Query: 135 YQQG----VCVPTFL-GLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVE 185
Y QG +C P L E+ HP++ S +PC T GD +IPN +IG C+ED E
Sbjct: 1066 YSQGGDGPMCRPVLLLPGEDTHPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEDAE 1123
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ G K +L+TGPNMGGKST++RQ GL+ ++AQM
Sbjct: 1124 ADG----KAYCVLVTGPNMGGKSTLIRQAGLLAVMAQM 1157
>gi|195378902|ref|XP_002048220.1| GJ11467 [Drosophila virilis]
gi|194155378|gb|EDW70562.1| GJ11467 [Drosophila virilis]
Length = 1192
Score = 70.9 bits (172), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 50/85 (58%), Gaps = 12/85 (14%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLL 198
+CVP + ++ P+I E +PCA TYIPN +G N + + L
Sbjct: 910 ICVPELVSAQQAQPFIELEEGYHPCAN-PSTYIPNGLQLGT-----------NSEAPLSL 957
Query: 199 LTGPNMGGKSTVMRQLGLITILAQM 223
LTGPNMGGKST+MRQ+GL+ I+AQ+
Sbjct: 958 LTGPNMGGKSTLMRQVGLLVIMAQI 982
>gi|403260724|ref|XP_003922808.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 1228
Score = 70.5 bits (171), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 11/89 (12%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ E+G K
Sbjct: 943 MCRPVILLPEDTAPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEENG-----KA 995
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 996 YCVLVTGPNMGGKSTLMRQAGLLVVMAQM 1024
>gi|403260722|ref|XP_003922807.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 1358
Score = 70.1 bits (170), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 56/89 (62%), Gaps = 11/89 (12%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ E+G K
Sbjct: 1073 MCRPVILLPEDTAPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEENG-----KA 1125
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 1126 YCVLVTGPNMGGKSTLMRQAGLLVVMAQM 1154
>gi|328866749|gb|EGG15132.1| mutS like protein [Dictyostelium fasciculatum]
Length = 1168
Score = 70.1 bits (170), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/91 (39%), Positives = 55/91 (60%), Gaps = 6/91 (6%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT--GDQTYIPNSTVIGRCKEDVESGGEGNR---- 192
+C P F+ ++ P +S LE +P + G +IPN +G ++ S G N
Sbjct: 872 MCRPHFIETQDDEPCLSVLEMRHPAISIKGGADFIPNDLQLGGLGTEISSTGVKNNSHPG 931
Query: 193 KPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
KP+V++LTGPNMGGKST++RQ ++ I+AQM
Sbjct: 932 KPSVMVLTGPNMGGKSTLLRQACILVIMAQM 962
>gi|297667666|ref|XP_002812093.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 2 [Pongo abelii]
Length = 1232
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ + G K
Sbjct: 946 MCRPVILLPEDTRPFLKLKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEQENG----KA 999
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 1000 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1028
>gi|297667664|ref|XP_002812092.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 1 [Pongo abelii]
Length = 1362
Score = 69.7 bits (169), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ + G K
Sbjct: 1076 MCRPVILLPEDTRPFLKLKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEQENG----KA 1129
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 1130 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1158
>gi|148236863|ref|NP_001089247.1| mutS homolog 6 [Xenopus laevis]
gi|58399508|gb|AAH89270.1| MGC85188 protein [Xenopus laevis]
Length = 1340
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 45/120 (37%), Positives = 68/120 (56%), Gaps = 14/120 (11%)
Query: 114 DYKPQQSNNTIFSQRNILKDM--YQQG----VCVPTFLGLEEPHPYISALESLYPCAT-- 165
+YK Q+ F+ ++L + Y QG VC P + E P++ S +PC T
Sbjct: 1023 NYKEWQTAVECFAVLDVLISLSQYSQGGDGPVCRPEIVLQENGSPFLELKGSRHPCITKT 1082
Query: 166 --GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
GD +IPN ++G CKE E +G+ + +L+TGPNMGGKST++RQ GL ++AQ+
Sbjct: 1083 FFGDD-FIPNDILVG-CKE--EDSDDGSDEAHCVLVTGPNMGGKSTLLRQAGLQVVMAQL 1138
>gi|242011381|ref|XP_002426429.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212510534|gb|EEB13691.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1265
Score = 68.9 bits (167), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 50/89 (56%), Gaps = 18/89 (20%)
Query: 139 VCVPTFLGLEEPH----PYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C+P F EP P+I +PC + + +IPN +G N
Sbjct: 991 MCLPEF---SEPQINNKPFIDIANGRHPCLSVENGFIPNDIKLG-----------TNSFS 1036
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++LLTGPNMGGKST+MRQLGLITI+AQM
Sbjct: 1037 NLVLLTGPNMGGKSTLMRQLGLITIMAQM 1065
>gi|344291831|ref|XP_003417633.1| PREDICTED: DNA mismatch repair protein Msh6 [Loxodonta africana]
Length = 1282
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 57/90 (63%), Gaps = 12/90 (13%)
Query: 139 VCVPTFLGLEEPHP-YISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRK 193
+C P L E+ +P ++ S +PC T GD +IPN +IG C+E+ EGN K
Sbjct: 996 MCRPVILLPEDDNPPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEE-----EGNGK 1048
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 1049 AYCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1078
>gi|19548099|gb|AAL87401.1| mutS homolog 6 (E. coli) [Homo sapiens]
Length = 1358
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ + G K
Sbjct: 1074 MCRPVILLPEDTPPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEQENG----KA 1127
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 1128 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1156
>gi|397504284|ref|XP_003822731.1| PREDICTED: DNA mismatch repair protein Msh6 [Pan paniscus]
Length = 1299
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ + G K
Sbjct: 1013 MCRPVILLPEDTPPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEQENG----KA 1066
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 1067 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1095
>gi|4504191|ref|NP_000170.1| DNA mismatch repair protein Msh6 [Homo sapiens]
gi|68067672|sp|P52701.2|MSH6_HUMAN RecName: Full=DNA mismatch repair protein Msh6; Short=hMSH6; AltName:
Full=G/T mismatch-binding protein; Short=GTBP;
Short=GTMBP; AltName: Full=MutS-alpha 160 kDa subunit;
Short=p160
gi|1294813|gb|AAC50461.1| G/T mismatch binding protein [Homo sapiens]
gi|6063479|gb|AAB39212.2| hMSH6 protein [Homo sapiens]
gi|13279008|gb|AAH04246.1| MutS homolog 6 (E. coli) [Homo sapiens]
gi|119620614|gb|EAX00209.1| mutS homolog 6 (E. coli), isoform CRA_b [Homo sapiens]
gi|123987976|gb|ABM83824.1| mutS homolog 6 (E. coli) [synthetic construct]
gi|307684536|dbj|BAJ20308.1| mutS homolog 6 [synthetic construct]
Length = 1360
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ + G K
Sbjct: 1074 MCRPVILLPEDTPPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEQENG----KA 1127
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 1128 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1156
>gi|194375916|dbj|BAG57302.1| unnamed protein product [Homo sapiens]
Length = 1230
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ + G K
Sbjct: 944 MCRPVILLPEDTPPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEQENG----KA 997
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 998 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1026
>gi|426335494|ref|XP_004029255.1| PREDICTED: DNA mismatch repair protein Msh6 [Gorilla gorilla gorilla]
Length = 1230
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ + G K
Sbjct: 944 MCRPVILLPEDTPPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEQENG----KA 997
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 998 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1026
>gi|72083768|ref|XP_786710.1| PREDICTED: multivesicular body subunit 12B-like [Strongylocentrotus
purpuratus]
Length = 276
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESLFQIDY 74
PIT I ++ D +CP GYTVI T D + DAD+W++ + TRY+C +K + D
Sbjct: 5 PITGICIVADKSRCPDGYTVIETTTD-NQDADLWKDKFLKKKITRYMCYTKNLNPLAGDN 63
Query: 75 IVENICIINEKETPPDGFCLIARTLDSDQ 103
++ ++ +I E E+ P G+ I T D+ +
Sbjct: 64 VLVDVMVIKENESIPAGYSCIQNTHDTSE 92
>gi|410217568|gb|JAA06003.1| mutS homolog 6 [Pan troglodytes]
gi|410261614|gb|JAA18773.1| mutS homolog 6 [Pan troglodytes]
gi|410295678|gb|JAA26439.1| mutS homolog 6 [Pan troglodytes]
Length = 1360
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ + G K
Sbjct: 1074 MCRPVILLPEDTPPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEQENG----KA 1127
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 1128 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1156
>gi|1840467|gb|AAB47425.1| bacterial MutS homolog [Homo sapiens]
Length = 1360
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ + G K
Sbjct: 1074 MCRPVILLPEDTPPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEQENG----KA 1127
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 1128 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1156
>gi|410349455|gb|JAA41331.1| mutS homolog 6 [Pan troglodytes]
Length = 1360
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ + G K
Sbjct: 1074 MCRPVILLPEDTPPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEQENG----KA 1127
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 1128 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1156
>gi|332226866|ref|XP_003262610.1| PREDICTED: DNA mismatch repair protein Msh6, partial [Nomascus
leucogenys]
Length = 1290
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ + G K
Sbjct: 1004 MCRPVILLPEDTPPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEQENG----KA 1057
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 1058 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1086
>gi|402890846|ref|XP_003908684.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 2 [Papio anubis]
Length = 1230
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ + G K
Sbjct: 944 MCRPVILLPEDTPPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEQENG----KA 997
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 998 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1026
>gi|355565681|gb|EHH22110.1| hypothetical protein EGK_05312 [Macaca mulatta]
Length = 1235
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ + G K
Sbjct: 975 MCRPVILLPEDTPPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEQENG----KA 1028
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 1029 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1057
>gi|2696086|dbj|BAA23674.1| GTBP-N [Homo sapiens]
Length = 1360
Score = 68.6 bits (166), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ + G K
Sbjct: 1074 MCRPVILLPEDTPPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEQENG----KA 1127
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 1128 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1156
>gi|198435135|ref|XP_002126574.1| PREDICTED: similar to MGC85188 protein [Ciona intestinalis]
Length = 1307
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 46/75 (61%), Gaps = 10/75 (13%)
Query: 152 PYISALESLYPCATG---DQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKS 208
P + + +PC T +IPN T++G C G EG P LLLTGPNMGGKS
Sbjct: 1038 PLLEIRSARHPCITKIIFSDDFIPNDTILG-C------GDEGEDHPMCLLLTGPNMGGKS 1090
Query: 209 TVMRQLGLITILAQM 223
T+MRQ+GL+ ILAQ+
Sbjct: 1091 TLMRQVGLVVILAQL 1105
>gi|355751303|gb|EHH55558.1| hypothetical protein EGM_04790 [Macaca fascicularis]
Length = 1235
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ + G K
Sbjct: 975 MCRPVILLPEDTPPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEQENG----KA 1028
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 1029 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1057
>gi|402890844|ref|XP_003908683.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 1 [Papio anubis]
Length = 1360
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ + G K
Sbjct: 1074 MCRPVILLPEDTPPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEQENG----KA 1127
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 1128 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1156
>gi|194388224|dbj|BAG65496.1| unnamed protein product [Homo sapiens]
Length = 1058
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ + G K
Sbjct: 772 MCRPVILLPEDTPPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEQENG----KA 825
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 826 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 854
>gi|149242560|pdb|2O8B|B Chain B, Human Mutsalpha (Msh2MSH6) BOUND TO ADP AND A G T MISPAIR
gi|149242564|pdb|2O8C|B Chain B, Human Mutsalpha (msh2/msh6) Bound To Adp And An
O6-methyl-guanine T Mispair
gi|149242568|pdb|2O8D|B Chain B, Human Mutsalpha (Msh2MSH6) BOUND TO ADP AND A G DU MISPAIR
gi|149242572|pdb|2O8E|B Chain B, Human Mutsalpha (Msh2MSH6) BOUND TO A G T MISPAIR, WITH
ADP BOUND TO Msh2 Only
gi|149242576|pdb|2O8F|B Chain B, Human Mutsalpha (Msh2MSH6) BOUND TO DNA WITH A SINGLE BASE
T INSERT
Length = 1022
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ + G K
Sbjct: 736 MCRPVILLPEDTPPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEQENG----KA 789
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 790 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 818
>gi|388453415|ref|NP_001253005.1| DNA mismatch repair protein Msh6 [Macaca mulatta]
gi|380812114|gb|AFE77932.1| DNA mismatch repair protein Msh6 [Macaca mulatta]
gi|383417799|gb|AFH32113.1| DNA mismatch repair protein Msh6 [Macaca mulatta]
gi|384946650|gb|AFI36930.1| DNA mismatch repair protein Msh6 [Macaca mulatta]
Length = 1360
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ + G K
Sbjct: 1074 MCRPVILLPEDTPPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEQENG----KA 1127
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 1128 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1156
>gi|12846234|dbj|BAB27085.1| unnamed protein product [Mus musculus]
Length = 444
Score = 68.2 bits (165), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 15/98 (15%)
Query: 135 YQQG----VCVPTF-LGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVE 185
Y QG +C P L E+ HP++ S +PC T GD +IPN +IG C+E+ E
Sbjct: 149 YSQGGDGPMCRPEIVLPGEDTHPFLEFKGSRHPCITKTFFGDD-FIPNDILIG-CEEEAE 206
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G K +L+TGPNMGGKST++RQ GL+ ++AQ+
Sbjct: 207 EHG----KAYCVLVTGPNMGGKSTLIRQAGLLAVMAQL 240
>gi|148706690|gb|EDL38637.1| mCG15886 [Mus musculus]
Length = 1379
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 15/98 (15%)
Query: 135 YQQG----VCVPTF-LGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVE 185
Y QG +C P L E+ HP++ S +PC T GD +IPN +IG C+E+ E
Sbjct: 1084 YSQGGDGPMCRPEIVLPGEDTHPFLEFKGSRHPCITKTFFGDD-FIPNDILIG-CEEEAE 1141
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G K +L+TGPNMGGKST++RQ GL+ ++AQ+
Sbjct: 1142 EHG----KAYCVLVTGPNMGGKSTLIRQAGLLAVMAQL 1175
>gi|26353224|dbj|BAC40242.1| unnamed protein product [Mus musculus]
Length = 1358
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 15/98 (15%)
Query: 135 YQQG----VCVPTF-LGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVE 185
Y QG +C P L E+ HP++ S +PC T GD +IPN +IG C+E+ E
Sbjct: 1063 YSQGGDGPMCRPEIVLPGEDTHPFLEFKGSRHPCITKTFFGDD-FIPNDILIG-CEEEAE 1120
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G K +L+TGPNMGGKST++RQ GL+ ++AQ+
Sbjct: 1121 EHG----KAYCVLVTGPNMGGKSTLIRQAGLLAVMAQL 1154
>gi|6754744|ref|NP_034960.1| DNA mismatch repair protein Msh6 [Mus musculus]
gi|341940990|sp|P54276.3|MSH6_MOUSE RecName: Full=DNA mismatch repair protein Msh6; AltName: Full=G/T
mismatch-binding protein; Short=GTBP; Short=GTMBP;
AltName: Full=MutS-alpha 160 kDa subunit; AltName:
Full=p160
gi|2665637|gb|AAB88445.1| mismatch repair protein MSH6 [Mus musculus]
gi|30109297|gb|AAH51160.1| MutS homolog 6 (E. coli) [Mus musculus]
gi|30185718|gb|AAH51634.1| MutS homolog 6 (E. coli) [Mus musculus]
Length = 1358
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 15/98 (15%)
Query: 135 YQQG----VCVPTF-LGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVE 185
Y QG +C P L E+ HP++ S +PC T GD +IPN +IG C+E+ E
Sbjct: 1063 YSQGGDGPMCRPEIVLPGEDTHPFLEFKGSRHPCITKTFFGDD-FIPNDILIG-CEEEAE 1120
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G K +L+TGPNMGGKST++RQ GL+ ++AQ+
Sbjct: 1121 EHG----KAYCVLVTGPNMGGKSTLIRQAGLLAVMAQL 1154
>gi|347969433|ref|XP_312887.5| AGAP003190-PA [Anopheles gambiae str. PEST]
gi|333468522|gb|EAA08481.5| AGAP003190-PA [Anopheles gambiae str. PEST]
Length = 1290
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 53/89 (59%), Gaps = 16/89 (17%)
Query: 140 CVPTFLGLEEP---HPYISALESLYPCATGD--QTYIPNSTVIGRCKEDVESGGEGNRKP 194
CVP L +E +I E ++PC + + + +IPN T IG G+ K
Sbjct: 1012 CVPVLLSKDETIGGKSFIEIEEGIHPCLSSEAAENFIPNGTAIG-----------GDGKA 1060
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++LLTGPNMGGKST+MRQ+GL+ +L+Q+
Sbjct: 1061 NLVLLTGPNMGGKSTLMRQVGLLAVLSQI 1089
>gi|332813367|ref|XP_003309101.1| PREDICTED: DNA mismatch repair protein Msh6 [Pan troglodytes]
Length = 1399
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ + G K
Sbjct: 1113 MCRPVILLPEDTPPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEQENG----KA 1166
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 1167 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1195
>gi|1817725|gb|AAC53034.1| G/T-mismatch binding protein [Mus musculus]
Length = 1358
Score = 68.2 bits (165), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/98 (42%), Positives = 59/98 (60%), Gaps = 15/98 (15%)
Query: 135 YQQG----VCVPTF-LGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVE 185
Y QG +C P L E+ HP++ S +PC T GD +IPN +IG C+E+ E
Sbjct: 1063 YSQGGDGPMCRPEIVLPGEDTHPFLEFKGSRHPCITKTFFGDD-FIPNDILIG-CEEEAE 1120
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G K +L+TGPNMGGKST++RQ GL+ ++AQ+
Sbjct: 1121 EHG----KAYCVLVTGPNMGGKSTLIRQAGLLAVMAQL 1154
>gi|260815207|ref|XP_002602365.1| hypothetical protein BRAFLDRAFT_283756 [Branchiostoma floridae]
gi|229287674|gb|EEN58377.1| hypothetical protein BRAFLDRAFT_283756 [Branchiostoma floridae]
Length = 1278
Score = 67.8 bits (164), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 40/91 (43%), Positives = 57/91 (62%), Gaps = 13/91 (14%)
Query: 139 VCVPTFLGLEEP-HPYISALESLYPC-----ATGDQTYIPNSTVIGRCKEDVESGGEGNR 192
+C P + E+ P+I E +PC + GD +IPN TV+G ESGG
Sbjct: 1016 MCRPELVTPEKNMQPFIEIREGRHPCICRTYSGGD--FIPNDTVVG---TSAESGG--TD 1068
Query: 193 KPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+V+L+TGPNMGGKST+MRQ+G+IT++AQ+
Sbjct: 1069 ASSVVLVTGPNMGGKSTLMRQVGIITVIAQL 1099
>gi|126304451|ref|XP_001382177.1| PREDICTED: DNA mismatch repair protein Msh6 [Monodelphis domestica]
Length = 1423
Score = 67.8 bits (164), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 57/96 (59%), Gaps = 10/96 (10%)
Query: 135 YQQG---VCVPTFL-GLEEPHPYISALESLYPCATGD---QTYIPNSTVIGRCKEDVESG 187
Y +G +C P L E+ P++ + +PC T + +IPN +IG CKE E
Sbjct: 1127 YSRGDARMCRPVILVPDEDTQPFLKLKGARHPCITNNFFGDDFIPNDIMIG-CKE--EDS 1183
Query: 188 GEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+GN +L+TGPNMGGKST+MRQ GL+ I+AQM
Sbjct: 1184 EDGNWDAYCVLVTGPNMGGKSTLMRQAGLLVIMAQM 1219
>gi|291386823|ref|XP_002709926.1| PREDICTED: mutS homolog 6 [Oryctolagus cuniculus]
Length = 1361
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 54/90 (60%), Gaps = 11/90 (12%)
Query: 139 VCVPT-FLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRK 193
+C P L E P++ S +PC T GD +IPN +IG C+ED E G K
Sbjct: 1074 MCRPVILLPGENTAPFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEDEEENG----K 1127
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 1128 AYCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1157
>gi|357612845|gb|EHJ68197.1| putative DNA mismatch repair protein muts [Danaus plexippus]
Length = 622
Score = 67.4 bits (163), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 36/85 (42%), Positives = 54/85 (63%), Gaps = 13/85 (15%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLL 198
+C+P ++ PYI +E +PC + + +IPN T +G V++ P +LL
Sbjct: 349 ICLPEITYNKDQEPYIDIVEGRHPCISIPE-FIPNDTRLG-----VDN-------PRLLL 395
Query: 199 LTGPNMGGKSTVMRQLGLITILAQM 223
LTGPNMGGKST+MRQ+GL+T+LA +
Sbjct: 396 LTGPNMGGKSTLMRQVGLLTVLAHL 420
>gi|195441342|ref|XP_002068471.1| GK20488 [Drosophila willistoni]
gi|194164556|gb|EDW79457.1| GK20488 [Drosophila willistoni]
Length = 1182
Score = 66.6 bits (161), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 136 QQGVCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPT 195
Q +CVP F+ + P+I E +PC TYIPN +G E S
Sbjct: 895 QLAICVPQFVSGGD-QPFIQLEEGYHPCVNAS-TYIPNGLELGTENEAALS--------- 943
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
LLTGPNMGGKST+MRQ+GL+ I+AQ+
Sbjct: 944 --LLTGPNMGGKSTLMRQMGLLVIMAQI 969
>gi|444518975|gb|ELV12486.1| DNA mismatch repair protein Msh6 [Tupaia chinensis]
Length = 1306
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 59/99 (59%), Gaps = 17/99 (17%)
Query: 135 YQQG----VCVPTFL--GLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDV 184
Y QG +C P L G + P P++ S +PC T GD +IPN +IG C+E+
Sbjct: 1067 YSQGGDGPMCRPVILLPGEDTP-PFLELKGSRHPCITKTFFGDD-FIPNDILIG-CEEEE 1123
Query: 185 ESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
E G+ +L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 1124 EKNGQA----YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1158
>gi|449275264|gb|EMC84167.1| DNA mismatch repair protein Msh6, partial [Columba livia]
Length = 1247
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/90 (44%), Positives = 55/90 (61%), Gaps = 12/90 (13%)
Query: 139 VCVPT-FLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRK 193
+C P L ++ P++ S +PC T GD +IPN VIG +D ESG E
Sbjct: 987 LCRPVILLPVDSAPPFLELKNSRHPCITKTFFGDD-FIPNDIVIG--SKDEESGSEA--- 1040
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ +L+TGPNMGGKST+MRQ GL+ I+AQ+
Sbjct: 1041 -SCVLVTGPNMGGKSTLMRQAGLLVIMAQL 1069
>gi|170054869|ref|XP_001863325.1| DNA mismatch repair protein MSH6 [Culex quinquefasciatus]
gi|167875012|gb|EDS38395.1| DNA mismatch repair protein MSH6 [Culex quinquefasciatus]
Length = 1130
Score = 66.6 bits (161), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 52/89 (58%), Gaps = 13/89 (14%)
Query: 139 VCVPTFLGLEEPHPYISAL-ESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVL 197
C P L +E I L E ++PC + + YIPN +G+ +G R ++
Sbjct: 856 TCFPEILDTDEEKGQIFELSEGIHPCVSDPENYIPNGVSLGQ---------DGTR---LI 903
Query: 198 LLTGPNMGGKSTVMRQLGLITILAQMENP 226
LLTGPNMGGKST+MRQ+G++ I+AQ+ P
Sbjct: 904 LLTGPNMGGKSTLMRQVGVLAIMAQIGAP 932
>gi|195590405|ref|XP_002084936.1| GD12570 [Drosophila simulans]
gi|194196945|gb|EDX10521.1| GD12570 [Drosophila simulans]
Length = 1192
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 136 QQGVCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPT 195
Q +CVP + E P+I E +PCA TYIPN +G E
Sbjct: 908 QMVICVPELVSDAE-QPFIQLEEGYHPCANA-STYIPNGLELGTASE-----------AP 954
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ LLTGPNMGGKST+MR++GL+ I+AQ+
Sbjct: 955 LSLLTGPNMGGKSTLMREVGLLVIMAQI 982
>gi|195327727|ref|XP_002030569.1| GM24498 [Drosophila sechellia]
gi|194119512|gb|EDW41555.1| GM24498 [Drosophila sechellia]
Length = 1192
Score = 66.2 bits (160), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/88 (42%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 136 QQGVCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPT 195
Q +CVP + E P+I E +PCA TYIPN +G E
Sbjct: 908 QMVICVPELVSDAE-QPFIQLEEGYHPCANA-STYIPNGLELGTASE-----------AP 954
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ LLTGPNMGGKST+MR++GL+ I+AQ+
Sbjct: 955 LSLLTGPNMGGKSTLMREVGLLVIMAQI 982
>gi|312384757|gb|EFR29409.1| hypothetical protein AND_01583 [Anopheles darlingi]
Length = 1180
Score = 65.9 bits (159), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/91 (42%), Positives = 55/91 (60%), Gaps = 15/91 (16%)
Query: 137 QGVC-VPTFLGL-EEPHPYISALESLYPCATGD--QTYIPNSTVIGRCKEDVESGGEGNR 192
+GVC VP L P I E ++PC + +++IPN IG GEG
Sbjct: 900 EGVCCVPELLANGSNGKPLIEIEEGIHPCIASELMESFIPNGISIG---------GEG-- 948
Query: 193 KPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
K +++LLTGPNMGGKST+MRQ+GL+ ++AQ+
Sbjct: 949 KASLVLLTGPNMGGKSTLMRQVGLLAVMAQI 979
>gi|395508080|ref|XP_003758343.1| PREDICTED: DNA mismatch repair protein Msh6 [Sarcophilus harrisii]
Length = 1424
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 52/89 (58%), Gaps = 7/89 (7%)
Query: 139 VCVPTFL-GLEEPHPYISALESLYPCATGD---QTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L EE P++ S +PC T + +IPN +IG CKE E +
Sbjct: 1135 MCRPVILVPDEETRPFLKLKGSRHPCVTNNFFGDDFIPNDIMIG-CKE--EDSEDSTWDA 1191
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ I+AQM
Sbjct: 1192 YCVLVTGPNMGGKSTLMRQAGLLLIMAQM 1220
>gi|24664545|ref|NP_648755.1| Msh6 [Drosophila melanogaster]
gi|13124364|sp|Q9VUM0.2|MSH6_DROME RecName: Full=Probable DNA mismatch repair protein Msh6
gi|10727920|gb|AAF49656.2| Msh6 [Drosophila melanogaster]
gi|211938707|gb|ACJ13250.1| LD20722p [Drosophila melanogaster]
Length = 1190
Score = 65.5 bits (158), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 13/88 (14%)
Query: 136 QQGVCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPT 195
Q +CVP + + P+I E +PCA TYIPN +G E
Sbjct: 906 QMVICVPELVS-DADQPFIQLEEGYHPCANA-STYIPNGLELGTASE-----------AP 952
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ LLTGPNMGGKST+MR++GL+ I+AQ+
Sbjct: 953 LSLLTGPNMGGKSTLMREVGLLVIMAQI 980
>gi|410901537|ref|XP_003964252.1| PREDICTED: DNA mismatch repair protein Msh6-like [Takifugu rubripes]
Length = 1373
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 49/76 (64%), Gaps = 8/76 (10%)
Query: 152 PYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGK 207
P++ S +PC T GD +IPN IG C + E G+G+ T +L+TGPNMGGK
Sbjct: 1098 PFLELAGSRHPCVTKTFFGDD-FIPNDIFIG-CLDSREEEGDGD--ATCVLVTGPNMGGK 1153
Query: 208 STVMRQLGLITILAQM 223
ST+MRQ GL+ ILAQ+
Sbjct: 1154 STLMRQCGLVVILAQL 1169
>gi|195021403|ref|XP_001985388.1| GH17031 [Drosophila grimshawi]
gi|193898870|gb|EDV97736.1| GH17031 [Drosophila grimshawi]
Length = 1201
Score = 65.1 bits (157), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/85 (44%), Positives = 48/85 (56%), Gaps = 13/85 (15%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLL 198
+CVP + + P+I E +PC TYIPN +G E S L
Sbjct: 920 ICVPELVS-AQTQPFIELEEGYHPC-VNPSTYIPNGLQLGTESEAPLS-----------L 966
Query: 199 LTGPNMGGKSTVMRQLGLITILAQM 223
LTGPNMGGKST+MRQLGL+TI+AQ+
Sbjct: 967 LTGPNMGGKSTLMRQLGLLTIMAQI 991
>gi|355704543|gb|AES02262.1| mutS-like protein 6 [Mustela putorius furo]
Length = 1278
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 12/89 (13%)
Query: 139 VCVPTFLGLEEPHP-YISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRK 193
+C P L EE P ++ S +PC T GD +IPN +IG C+E+ E+G K
Sbjct: 993 MCRPVILLPEEGTPPFLDLRGSRHPCITKTFFGDD-FIPNDILIG-CEEEEENG-----K 1045
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
+L+TGPNMGGKST+MRQ GL+ ++AQ
Sbjct: 1046 AYCVLVTGPNMGGKSTLMRQAGLLAVMAQ 1074
>gi|296223907|ref|XP_002807586.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
Msh6-like, partial [Callithrix jacchus]
Length = 1223
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 55/89 (61%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC T GD +IPN +IG C+E+ E G K
Sbjct: 937 MCRPVILLPEDTPPFLELKGSRHPCVTKTFFGDD-FIPNDILIG-CEEEEEENG----KA 990
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 991 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1019
>gi|195126507|ref|XP_002007712.1| GI12236 [Drosophila mojavensis]
gi|193919321|gb|EDW18188.1| GI12236 [Drosophila mojavensis]
Length = 1189
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/85 (43%), Positives = 48/85 (56%), Gaps = 13/85 (15%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLL 198
+CVP + + P+I E +PCA TYIPN +G E + L
Sbjct: 908 ICVPELVS-GQAQPFIELEEGYHPCAN-PSTYIPNGLQLGTETE-----------APLSL 954
Query: 199 LTGPNMGGKSTVMRQLGLITILAQM 223
LTGPNMGGKST+MRQLGL+ I+AQ+
Sbjct: 955 LTGPNMGGKSTLMRQLGLLVIMAQI 979
>gi|432875278|ref|XP_004072762.1| PREDICTED: multivesicular body subunit 12B-like [Oryzias latipes]
Length = 257
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 66/124 (53%), Gaps = 6/124 (4%)
Query: 14 KPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESLFQID 73
+PITA+ VI K P GY V+++T D DAD+W++ F + TRYLC SK
Sbjct: 12 EPITAMGVITSPSKAPDGYYVVAQTTD-GGDADLWKDGLFKSKVTRYLCFSKEIR----P 66
Query: 74 YIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQ-SNNTIFSQRNILK 132
+V +I +I+ K+ P+ F + T+D+ + + +R V P++ + I+ + K
Sbjct: 67 EVVVDIKLIDSKDPLPEFFTAMPETIDTKEAAMRKRRLCVKMMPREAAERAIYDIQITAK 126
Query: 133 DMYQ 136
YQ
Sbjct: 127 SKYQ 130
>gi|351695606|gb|EHA98524.1| DNA mismatch repair protein Msh6 [Heterocephalus glaber]
Length = 1363
Score = 64.7 bits (156), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 59/99 (59%), Gaps = 18/99 (18%)
Query: 135 YQQG----VCVPTFL--GLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDV 184
Y QG +C P L G + P P++ S +PC GD +IPN +IG C+E
Sbjct: 1069 YSQGGDGPMCRPVILLPGEDNP-PFLELKGSRHPCIMKTFFGDD-FIPNDILIG-CEEQE 1125
Query: 185 ESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
E+G K +L+TGPNMGGKST++RQ GL+T++AQM
Sbjct: 1126 ENG-----KAYCVLVTGPNMGGKSTLIRQAGLLTVMAQM 1159
>gi|363731315|ref|XP_419359.3| PREDICTED: DNA mismatch repair protein Msh6 [Gallus gallus]
Length = 1345
Score = 64.3 bits (155), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 53/90 (58%), Gaps = 12/90 (13%)
Query: 139 VCVPT-FLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRK 193
+C P L ++ P++ + +PC T GD +IPN VIG ED G +
Sbjct: 1059 LCRPVILLPVDSAPPFLELKNARHPCITKTFFGDD-FIPNDIVIGSKDED------GGSE 1111
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ +L+TGPNMGGKST+MRQ GL+ I+AQ+
Sbjct: 1112 ASCVLVTGPNMGGKSTLMRQAGLLVIMAQL 1141
>gi|194751549|ref|XP_001958088.1| GF10737 [Drosophila ananassae]
gi|190625370|gb|EDV40894.1| GF10737 [Drosophila ananassae]
Length = 1187
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/88 (43%), Positives = 48/88 (54%), Gaps = 13/88 (14%)
Query: 136 QQGVCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPT 195
Q +CVP + E P+I E +PC TYIPN +G E S
Sbjct: 903 QMVICVPELVSGAE-QPFIQLEEGYHPCVNA-STYIPNGLELGTKSEAPLS--------- 951
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
LLTGPNMGGKST+MR+LGL+ I+AQ+
Sbjct: 952 --LLTGPNMGGKSTLMRELGLLVIMAQI 977
>gi|348574694|ref|XP_003473125.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh6-like
[Cavia porcellus]
Length = 1354
Score = 63.9 bits (154), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/99 (42%), Positives = 57/99 (57%), Gaps = 18/99 (18%)
Query: 135 YQQG----VCVPTFL--GLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDV 184
Y QG +C P L G P P++ S +PC T GD +IPN +IG C+E
Sbjct: 1062 YSQGGDGPMCRPALLLPGEHNP-PFLELRGSRHPCITKTFFGDD-FIPNDILIG-CEEQQ 1118
Query: 185 ESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
E G + +L+TGPNMGGKST++RQ GL+ ++AQM
Sbjct: 1119 EDG-----RAYCVLVTGPNMGGKSTLIRQAGLLAVMAQM 1152
>gi|443734707|gb|ELU18588.1| hypothetical protein CAPTEDRAFT_139957, partial [Capitella teleta]
Length = 1270
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 33/75 (44%), Positives = 47/75 (62%), Gaps = 8/75 (10%)
Query: 152 PYISALESLYPC---ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKS 208
P++ E +PC + +IPN T IG ED GEGN + ++L+TGPNMGGKS
Sbjct: 988 PFLEIREGRHPCISRSLAAADFIPNDTCIGGTAED---SGEGNGR--LVLVTGPNMGGKS 1042
Query: 209 TVMRQLGLITILAQM 223
T+MRQ+G + I+A +
Sbjct: 1043 TLMRQVGCLVIMAHL 1057
>gi|198430863|ref|XP_002121685.1| PREDICTED: similar to Protein FAM125B [Ciona intestinalis]
Length = 248
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 28/114 (24%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Query: 13 DKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESLFQI 72
++PIT + ++ + CP Y ++ +T++ + DAD W++ F + RYLC ++ S Q+
Sbjct: 4 NQPITNVCIVAERNACPPRYNILDRTIENE-DADFWKDGLFKSKIRRYLCFTREPSQNQL 62
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSNNTIFS 126
+ ++ ++ +I K+ P G+ + T D+ + + + + Y P+ S ++ S
Sbjct: 63 NEVITDMALIGVKDPVPVGYTALKETADTREQALKKHNLCIRYIPKTSTSSAIS 116
>gi|47205875|emb|CAF90893.1| unnamed protein product [Tetraodon nigroviridis]
Length = 434
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSK--TESLFQI 72
PIT + V+ + P+GY V+S T D DAD+W++ F + TRYLC ++ ++ +
Sbjct: 20 PITGVGVVASRNRAPAGYDVVSTTTD-GLDADLWKDGLFKSKVTRYLCFTRVFSKENSHL 78
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSNNTIFSQRNIL 131
++ ++ +I+ K+T P GF I T+D+ + +R + + P+ S IL
Sbjct: 79 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEQAFRKRRLCIKFIPRDSTEAAICDIRIL 137
>gi|195495129|ref|XP_002095136.1| GE19856 [Drosophila yakuba]
gi|194181237|gb|EDW94848.1| GE19856 [Drosophila yakuba]
Length = 1190
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 13/88 (14%)
Query: 136 QQGVCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPT 195
Q +CVP + E P+I E +PC TYIPN +G E
Sbjct: 906 QMVICVPELVSGTE-QPFIQLEEGYHPCVNA-STYIPNGLELGTASE-----------AP 952
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ LLTGPNMGGKST+MR++GL+ I+AQ+
Sbjct: 953 LSLLTGPNMGGKSTLMREVGLLVIMAQI 980
>gi|307206242|gb|EFN84313.1| Probable DNA mismatch repair protein Msh6 [Harpegnathos saltator]
Length = 1135
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 54/94 (57%), Gaps = 13/94 (13%)
Query: 131 LKDMYQQG-VCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGE 189
L D + G +CVP + ++ + +PC T D +IPN T++ +D S
Sbjct: 850 LADYARNGDMCVPEIHDGSDGEIFVEIRDGKHPCITSD-NFIPNDTLLA--TDDAAS--- 903
Query: 190 GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++LTGPNMGGKST+MRQ+GLITI+AQ+
Sbjct: 904 ------FMILTGPNMGGKSTLMRQVGLITIMAQL 931
>gi|194872672|ref|XP_001973060.1| GG13556 [Drosophila erecta]
gi|190654843|gb|EDV52086.1| GG13556 [Drosophila erecta]
Length = 1190
Score = 63.9 bits (154), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 48/88 (54%), Gaps = 13/88 (14%)
Query: 136 QQGVCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPT 195
Q +CVP + E P+I E +PC TYIPN +G E
Sbjct: 906 QMVICVPELVSGAE-QPFIQLEEGYHPCVNA-STYIPNGLELGTTSE-----------AP 952
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ LLTGPNMGGKST+MR++GL+ I+AQ+
Sbjct: 953 LSLLTGPNMGGKSTLMREVGLLVIMAQI 980
>gi|47210367|emb|CAF90228.1| unnamed protein product [Tetraodon nigroviridis]
gi|47210371|emb|CAF90232.1| unnamed protein product [Tetraodon nigroviridis]
Length = 289
Score = 63.2 bits (152), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSK--TESLFQI 72
PIT + V+ + P+GY V+S T D DAD+W++ F + TRYLC ++ ++ +
Sbjct: 20 PITGVGVVASRNRAPAGYDVVSTTTD-GLDADLWKDGLFKSKVTRYLCFTRVFSKENSHL 78
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSNNTIFSQRNIL 131
++ ++ +I+ K+T P GF I T+D+ + +R + + P+ S IL
Sbjct: 79 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEQAFRKRRLCIKFIPRDSTEAAICDIRIL 137
>gi|387017148|gb|AFJ50692.1| Multivesicular body subunit 12B [Crotalus adamanteus]
Length = 289
Score = 62.8 bits (151), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 37/124 (29%), Positives = 66/124 (53%), Gaps = 4/124 (3%)
Query: 10 IPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL 69
+P D PIT + V+ + PS Y V+++T D DAD+W++ F + TRYLC ++T S
Sbjct: 14 VPMD-PITGVGVVASRNRAPSNYDVVAQTAD-GLDADLWKDGLFKSKVTRYLCFTRTFSK 71
Query: 70 --FQIDYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSNNTIFSQ 127
+ ++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 72 ENSHLGNVLVDMKLIDIKDTLPVGFIPIQETMDTQETAFRKKRLCIKFIPRDSTEAAICD 131
Query: 128 RNIL 131
IL
Sbjct: 132 VRIL 135
>gi|170590105|ref|XP_001899813.1| MutS domain III family protein [Brugia malayi]
gi|158592732|gb|EDP31329.1| MutS domain III family protein [Brugia malayi]
Length = 1182
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 18/74 (24%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP ++A+ A+G TYIPNS ++G GN +P ++LLTGPNMGGKST
Sbjct: 920 HPSLAAM-----AASGSSFTYIPNSVLLG-----------GN-EPPIILLTGPNMGGKST 962
Query: 210 VMRQLGLITILAQM 223
+MRQ+G++ +LAQ+
Sbjct: 963 LMRQVGVLVVLAQI 976
>gi|432888940|ref|XP_004075098.1| PREDICTED: multivesicular body subunit 12B-like [Oryzias latipes]
Length = 294
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSK--TESLFQI 72
PIT + V+ + P+GY V+S T D DAD+W++ F + TRYLC ++ ++ +
Sbjct: 18 PITGVGVVASRNRAPTGYDVVSTTTD-GLDADLWKDGLFKSKVTRYLCFTRVFSKENSHL 76
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSNNTIFSQRNIL 131
++ ++ +I+ K+T P GF I T+D+ + +R + + P+ S IL
Sbjct: 77 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEQAFRKRRLCIKFIPRDSTEAAICDIRIL 135
>gi|395829624|ref|XP_003787949.1| PREDICTED: DNA mismatch repair protein Msh6-like isoform 3 [Otolemur
garnettii]
Length = 1228
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC GD +IPN +IG C+E+ E G K
Sbjct: 942 MCRPVILLPEDTAPFLELKGSRHPCIMKTFFGDD-FIPNDILIG-CEEEEEENG----KA 995
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 996 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1024
>gi|395829622|ref|XP_003787948.1| PREDICTED: DNA mismatch repair protein Msh6-like isoform 2
[Otolemur garnettii]
Length = 1056
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC GD +IPN +IG C+E+ E G K
Sbjct: 770 MCRPVILLPEDTAPFLELKGSRHPCIMKTFFGDD-FIPNDILIG-CEEEEEENG----KA 823
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 824 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 852
>gi|395829620|ref|XP_003787947.1| PREDICTED: DNA mismatch repair protein Msh6-like isoform 1 [Otolemur
garnettii]
Length = 1358
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 39/89 (43%), Positives = 54/89 (60%), Gaps = 10/89 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
+C P L E+ P++ S +PC GD +IPN +IG C+E+ E G K
Sbjct: 1072 MCRPVILLPEDTAPFLELKGSRHPCIMKTFFGDD-FIPNDILIG-CEEEEEENG----KA 1125
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 1126 YCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1154
>gi|115496586|ref|NP_001070074.1| uncharacterized protein LOC767667 [Danio rerio]
gi|115313517|gb|AAI24181.1| Family with sequence similarity 125, member B, duplicate a [Danio
rerio]
Length = 296
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC ++ S +
Sbjct: 18 PITGVGVVASRNRAPTGYDVVAQTTD-GIDADLWKDGLFKSKVTRYLCFTRAFSKENSHL 76
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSNNTIFSQRNIL 131
++ ++ +I+ K+T P GF I T+D+ + +R + + P+ S IL
Sbjct: 77 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEPAFRKRRLCIKFIPRDSTEAAICDIRIL 135
>gi|73970143|ref|XP_531814.2| PREDICTED: DNA mismatch repair protein Msh6 [Canis lupus familiaris]
Length = 1283
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 58/98 (59%), Gaps = 15/98 (15%)
Query: 135 YQQG----VCVPTFLGLEEPHP-YISALESLYPCAT----GDQTYIPNSTVIGRCKEDVE 185
Y QG +C P L EE P ++ S +PC T GD +IPN +IG C+E+ E
Sbjct: 988 YSQGSDGPMCRPVILLPEEGTPPFLDLRGSRHPCITKTFFGDD-FIPNDILIG-CEEEEE 1045
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G K +L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 1046 ENG----KAYCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1079
>gi|410903239|ref|XP_003965101.1| PREDICTED: multivesicular body subunit 12B-like [Takifugu rubripes]
Length = 295
Score = 62.8 bits (151), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 63/119 (52%), Gaps = 3/119 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSK--TESLFQI 72
PIT + V+ + P+GY V+S T D DAD+W++ F + TRYLC ++ ++ +
Sbjct: 18 PITGVGVVASRNRAPTGYDVVSTTTD-GLDADLWKDGLFKSKVTRYLCFTRVFSKENSHL 76
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSNNTIFSQRNIL 131
++ ++ +I+ K+T P GF I T+D+ + +R + + P+ S IL
Sbjct: 77 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEQAFRKRRLCIKFIPRDSTEAAICDIRIL 135
>gi|327262723|ref|XP_003216173.1| PREDICTED: DNA mismatch repair protein Msh6-like [Anolis
carolinensis]
Length = 1361
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 53/90 (58%), Gaps = 10/90 (11%)
Query: 139 VCVPTFLGLEEPHPYISALE-SLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRK 193
VC P L +E P LE S +PC T GD +IPN IG +DV+ E K
Sbjct: 1076 VCRPIILLPDENTPPFLELENSRHPCITKTFFGDD-FIPNDIFIG--VKDVKGNSEA--K 1130
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ I+AQ+
Sbjct: 1131 APCILVTGPNMGGKSTLMRQAGLLVIMAQL 1160
>gi|326914905|ref|XP_003203763.1| PREDICTED: DNA mismatch repair protein Msh6-like [Meleagris
gallopavo]
Length = 1289
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 52/90 (57%), Gaps = 12/90 (13%)
Query: 139 VCVPT-FLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRK 193
+C P L ++ P + + +PC T GD +IPN VIG ED G +
Sbjct: 1003 LCRPVILLPVDSAPPVLELKNARHPCITKTFFGDD-FIPNDIVIGSKDED------GGSE 1055
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ +L+TGPNMGGKST+MRQ GL+ I+AQ+
Sbjct: 1056 ASCVLVTGPNMGGKSTLMRQAGLLVIMAQL 1085
>gi|156549300|ref|XP_001600292.1| PREDICTED: probable DNA mismatch repair protein Msh6 [Nasonia
vitripennis]
Length = 1151
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 50/86 (58%), Gaps = 13/86 (15%)
Query: 139 VCVPT-FLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVL 197
C+PT F ++ +I E +PC + +IPN TVI + ++
Sbjct: 875 TCIPTIFDDTDDQGIFIEIREGKHPCIVS-ENFIPNDTVIATAE-----------AAPLI 922
Query: 198 LLTGPNMGGKSTVMRQLGLITILAQM 223
+LTGPNMGGKST+MRQ+GLITI+AQ+
Sbjct: 923 ILTGPNMGGKSTLMRQVGLITIMAQI 948
>gi|148226595|ref|NP_001085140.1| uncharacterized protein LOC432218 [Xenopus laevis]
gi|47939669|gb|AAH72049.1| MGC78913 protein [Xenopus laevis]
Length = 290
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 40/134 (29%), Positives = 69/134 (51%), Gaps = 4/134 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY VIS+T D DAD+W++ F + TRYLC ++ S +
Sbjct: 18 PITGVGVVASRNRAPTGYDVISQTTD-GLDADLWKDGLFKSKVTRYLCFTRVFSRENSHL 76
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSNNTIFSQRNILK 132
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S IL
Sbjct: 77 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDSTEAAICDIRILS 136
Query: 133 DMYQQGVCVPTFLG 146
+Q TF+G
Sbjct: 137 -RSKQAPPQYTFIG 149
>gi|312072605|ref|XP_003139141.1| hypothetical protein LOAG_03556 [Loa loa]
gi|307765695|gb|EFO24929.1| hypothetical protein LOAG_03556 [Loa loa]
Length = 1204
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%), Gaps = 18/74 (24%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP ++A+ A+G TYIPNS ++G GN +P+ +LLTGPNMGGKST
Sbjct: 942 HPSLAAI-----AASGSSFTYIPNSVLLG-----------GN-QPSTILLTGPNMGGKST 984
Query: 210 VMRQLGLITILAQM 223
+MRQ+G++ +LAQ+
Sbjct: 985 LMRQVGVLVVLAQI 998
>gi|301761894|ref|XP_002916365.1| PREDICTED: multivesicular body subunit 12B-like [Ailuropoda
melanoleuca]
Length = 288
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 18 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 76
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSN 121
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 77 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQESAFRKKRLCIKFIPRDST 125
>gi|449685383|ref|XP_002165963.2| PREDICTED: DNA mismatch repair protein Msh6-like [Hydra
magnipapillata]
Length = 354
Score = 62.4 bits (150), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 54/108 (50%), Gaps = 14/108 (12%)
Query: 126 SQRNIL----KDMYQQGV-CVPTFLGL-----EEPHPYISALESLYPCATGDQTYIPNST 175
+ RNI KD+ +G+ C P L E P+ + +PC IPN
Sbjct: 54 TMRNIFNRFDKDLNIEGLSCRPQVCSLLDENGNEVQPFFEFVNCRHPCMPNASDLIPNDI 113
Query: 176 VIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++G+ E + LL+TGPNMGGKST+MRQ G++ I+AQM
Sbjct: 114 LLGK----NEHSNNNKKASCCLLITGPNMGGKSTLMRQAGVLLIMAQM 157
>gi|341900974|gb|EGT56909.1| CBN-MSH-6 protein [Caenorhabditis brenneri]
Length = 1193
Score = 62.4 bits (150), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 21/93 (22%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPC--------ATGDQTYIPNSTVIGRCKEDVESGGEG 190
+C+P F + PY+ + L+PC T T+I NST +G +
Sbjct: 912 MCMPEF-DFKSAKPYLVVEKGLHPCLAMHARNEVTQTSTFIANSTTMGETE--------- 961
Query: 191 NRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
V+LLTGPNMGGKST+MRQ ++ ILA +
Sbjct: 962 ---AAVMLLTGPNMGGKSTLMRQTAVLAILAHL 991
>gi|341882591|gb|EGT38526.1| hypothetical protein CAEBREN_00497 [Caenorhabditis brenneri]
Length = 1144
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 21/93 (22%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPC--------ATGDQTYIPNSTVIGRCKEDVESGGEG 190
+C+P F + PY+ + L+PC T T+I NST +G +
Sbjct: 863 MCMPEF-DFKSAKPYLVVEKGLHPCLAMHARNEVTQTSTFIANSTTMGETE--------- 912
Query: 191 NRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
V+LLTGPNMGGKST+MRQ ++ ILA +
Sbjct: 913 ---AAVMLLTGPNMGGKSTLMRQTAVLAILAHL 942
>gi|326930566|ref|XP_003211417.1| PREDICTED: multivesicular body subunit 12B-like, partial [Meleagris
gallopavo]
Length = 260
Score = 62.0 bits (149), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/119 (29%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY VI++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 18 PITGVGVVASRSRAPTGYDVIAQTAD-GLDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 76
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSNNTIFSQRNIL 131
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S IL
Sbjct: 77 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEIAFRKKRLCIKFIPRDSTEAAICDIRIL 135
>gi|194225836|ref|XP_001500368.2| PREDICTED: multivesicular body subunit 12B-like [Equus caballus]
Length = 304
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 34 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 92
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQS 120
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 93 GNVLVDMKLIDTKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDS 140
>gi|339261468|ref|XP_003367889.1| DNA mismatch repair protein Msh6 [Trichinella spiralis]
gi|316964160|gb|EFV49402.1| DNA mismatch repair protein Msh6 [Trichinella spiralis]
Length = 352
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 12/88 (13%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCATGDQT---YIPNSTVIGRCKEDVESGGEGNRKPT 195
VC P F+ + ++ ES++PC +T YI N +IG + D
Sbjct: 77 VCCPKFIDAIDGKTFLRLDESVHPCCGKIKTQGDYIANDVLIGSSESDT---------GQ 127
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
VLLLTG NMGGKST+MRQ+G + +LAQ+
Sbjct: 128 VLLLTGANMGGKSTLMRQVGTLIVLAQI 155
>gi|71897273|ref|NP_001025848.1| multivesicular body subunit 12B [Gallus gallus]
gi|60099173|emb|CAH65417.1| hypothetical protein RCJMB04_31k17 [Gallus gallus]
Length = 288
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 18 PITGVGVVASRSRAPTGYDVVAQTAD-GLDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 76
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSNNTIFSQRNIL 131
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S IL
Sbjct: 77 GNVLVDMKLIDIKDTLPLGFIPIQETVDTQETAFRKKRLCIKFIPRDSTEAAICDIRIL 135
>gi|432095419|gb|ELK26618.1| Multivesicular body subunit 12B [Myotis davidii]
Length = 295
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 18 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 76
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSNNTIFSQRNILK 132
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S I+
Sbjct: 77 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDSTEAAICDIRIMG 136
Query: 133 DMYQ 136
Q
Sbjct: 137 RTKQ 140
>gi|224073987|ref|XP_002193480.1| PREDICTED: multivesicular body subunit 12B [Taeniopygia guttata]
Length = 290
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 19 PITGVGVLASRSRAPTGYDVVAQTAD-GLDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 77
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSNNTIFSQRNIL 131
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S IL
Sbjct: 78 GNVLVDMKLIDIKDTLPVGFMPIQETIDTQEVAFRKKRLCIKFIPRDSTEAAICDIRIL 136
>gi|157130502|ref|XP_001661901.1| DNA mismatch repair protein muts [Aedes aegypti]
gi|108871885|gb|EAT36110.1| AAEL011780-PA [Aedes aegypti]
Length = 1130
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 49/85 (57%), Gaps = 13/85 (15%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLL 198
+CVP L + E ++PC + + YIPN IG GEG ++L
Sbjct: 858 MCVPEILD-DSAGQVFELEEGIHPCVSDSENYIPNGVNIG---------GEG---APLVL 904
Query: 199 LTGPNMGGKSTVMRQLGLITILAQM 223
LTGPN+GGKST+MRQ+G++ ++AQ+
Sbjct: 905 LTGPNIGGKSTMMRQVGILAVMAQI 929
>gi|444721289|gb|ELW62033.1| Multivesicular body subunit 12B [Tupaia chinensis]
Length = 540
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/131 (27%), Positives = 68/131 (51%), Gaps = 5/131 (3%)
Query: 10 IPDDK--PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTE 67
+PD PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++
Sbjct: 11 LPDTSMDPITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSF 69
Query: 68 SL--FQIDYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSNNTIF 125
S + ++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 70 SKENSHLGNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDSTEAAI 129
Query: 126 SQRNILKDMYQ 136
I+ Q
Sbjct: 130 CDIRIMGRTKQ 140
>gi|339248295|ref|XP_003375781.1| DNA mismatch repair protein Msh6 [Trichinella spiralis]
gi|316970814|gb|EFV54686.1| DNA mismatch repair protein Msh6 [Trichinella spiralis]
Length = 884
Score = 61.6 bits (148), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 35/88 (39%), Positives = 49/88 (55%), Gaps = 12/88 (13%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCATGDQT---YIPNSTVIGRCKEDVESGGEGNRKPT 195
VC P F+ + ++ ES++PC +T YI N +IG + D
Sbjct: 618 VCCPKFIDAIDGKTFLRLDESVHPCCGKIKTQGDYIANDVLIGSSESDTGQ--------- 668
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
VLLLTG NMGGKST+MRQ+G + +LAQ+
Sbjct: 669 VLLLTGANMGGKSTLMRQVGTLIVLAQI 696
>gi|345326126|ref|XP_001508745.2| PREDICTED: multivesicular body subunit 12B-like [Ornithorhynchus
anatinus]
Length = 410
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/119 (28%), Positives = 64/119 (53%), Gaps = 3/119 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 140 PITGVGVLASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 198
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSNNTIFSQRNIL 131
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S IL
Sbjct: 199 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDSTEAAICDVRIL 257
>gi|426223707|ref|XP_004023308.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh6
[Ovis aries]
Length = 1352
Score = 61.6 bits (148), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 55/90 (61%), Gaps = 11/90 (12%)
Query: 139 VCVPTFLGLEEPHP-YISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRK 193
+C P L EE P ++ S +PC T GD +IPN +IG C+E+ E G K
Sbjct: 1065 MCRPIILLPEEDTPPFLDLKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEEENG----K 1118
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ I+AQM
Sbjct: 1119 AYCVLVTGPNMGGKSTLMRQAGLLAIMAQM 1148
>gi|334311507|ref|XP_001372746.2| PREDICTED: multivesicular body subunit 12B-like [Monodelphis
domestica]
Length = 323
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 54 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 112
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQS 120
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 113 GNVLVDMKLIDIKDTLPVGFIPIQETMDTQEVAFRKKRLCIKFIPRDS 160
>gi|195162754|ref|XP_002022219.1| GL25757 [Drosophila persimilis]
gi|194104180|gb|EDW26223.1| GL25757 [Drosophila persimilis]
Length = 945
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
Query: 136 QQGVCVPTFL-GLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
Q +CVP + G+++P +I E +PC TYIPN +G E
Sbjct: 662 QMVICVPELVSGVDQP--FIELQEGYHPCVN-TLTYIPNGLELGTKTE-----------A 707
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ LLTGPNMGGKST+MR+LGL+ I+AQ+
Sbjct: 708 PLSLLTGPNMGGKSTLMRELGLLVIMAQI 736
>gi|355735321|gb|AES11632.1| hypothetical protein [Mustela putorius furo]
Length = 292
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 22 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 80
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQS 120
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 81 GNVLVDMKLIDIKDTLPVGFIPIQETMDTQELAFRKKRLCIKFIPRDS 128
>gi|300794942|ref|NP_001179666.1| DNA mismatch repair protein Msh6 [Bos taurus]
gi|296482664|tpg|DAA24779.1| TPA: mutS homolog 6 [Bos taurus]
Length = 1360
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 55/90 (61%), Gaps = 11/90 (12%)
Query: 139 VCVPTFLGLEEPHP-YISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRK 193
+C P L EE P ++ S +PC T GD +IPN +IG C+E+ E G K
Sbjct: 1073 MCRPIILLPEEDTPPFLDLKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEEENG----K 1126
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ I+AQM
Sbjct: 1127 AYCVLVTGPNMGGKSTLMRQAGLLAIMAQM 1156
>gi|196016559|ref|XP_002118131.1| hypothetical protein TRIADDRAFT_33687 [Trichoplax adhaerens]
gi|190579257|gb|EDV19356.1| hypothetical protein TRIADDRAFT_33687 [Trichoplax adhaerens]
Length = 984
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 46/77 (59%), Gaps = 12/77 (15%)
Query: 152 PYISALESLYPCAT-----GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGG 206
PY+ +PC + GD +IPN T+IG ++ N +L+TGPNMGG
Sbjct: 736 PYVEIRNGRHPCISQTFSGGD--FIPNDTIIG-----IKDSNNCNETGNSVLVTGPNMGG 788
Query: 207 KSTVMRQLGLITILAQM 223
KST+MRQ+GL+ I+AQ+
Sbjct: 789 KSTLMRQVGLLAIMAQL 805
>gi|440906162|gb|ELR56463.1| DNA mismatch repair protein Msh6 [Bos grunniens mutus]
Length = 1361
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 42/90 (46%), Positives = 55/90 (61%), Gaps = 11/90 (12%)
Query: 139 VCVPTFLGLEEPHP-YISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRK 193
+C P L EE P ++ S +PC T GD +IPN +IG C+E+ E G K
Sbjct: 1074 MCRPIILLPEEDTPPFLDLKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEEENG----K 1127
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ I+AQM
Sbjct: 1128 AYCVLVTGPNMGGKSTLMRQAGLLAIMAQM 1157
>gi|410979140|ref|XP_003995944.1| PREDICTED: multivesicular body subunit 12B [Felis catus]
Length = 449
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 34/124 (27%), Positives = 65/124 (52%), Gaps = 3/124 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 61 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 119
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSNNTIFSQRNILK 132
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S I+
Sbjct: 120 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDSTEAAICDIRIMG 179
Query: 133 DMYQ 136
Q
Sbjct: 180 RTKQ 183
>gi|426226171|ref|XP_004007222.1| PREDICTED: multivesicular body subunit 12B [Ovis aries]
Length = 426
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 156 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 214
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQS 120
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 215 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDS 262
>gi|345805846|ref|XP_537843.3| PREDICTED: multivesicular body subunit 12B [Canis lupus familiaris]
Length = 384
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 114 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 172
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSN 121
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 173 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDST 221
>gi|125978269|ref|XP_001353167.1| GA20021 [Drosophila pseudoobscura pseudoobscura]
gi|54641920|gb|EAL30669.1| GA20021 [Drosophila pseudoobscura pseudoobscura]
Length = 1189
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/89 (41%), Positives = 51/89 (57%), Gaps = 15/89 (16%)
Query: 136 QQGVCVPTFL-GLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKP 194
Q +CVP + G+++P +I E +PC TYIPN +G E
Sbjct: 906 QMVICVPELVSGVDQP--FIELQEGYHPCVN-TLTYIPNGLELGTKTE-----------A 951
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ LLTGPNMGGKST+MR+LGL+ I+AQ+
Sbjct: 952 PLSLLTGPNMGGKSTLMRELGLLVIMAQI 980
>gi|351707223|gb|EHB10142.1| Multivesicular body subunit 12B, partial [Heterocephalus glaber]
Length = 292
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 22 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSRENSHL 80
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSN 121
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 81 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDST 129
>gi|403299906|ref|XP_003940713.1| PREDICTED: multivesicular body subunit 12B [Saimiri boliviensis
boliviensis]
Length = 326
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 56 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 114
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQS 120
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 115 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDS 162
>gi|348569789|ref|XP_003470680.1| PREDICTED: multivesicular body subunit 12B-like [Cavia porcellus]
Length = 303
Score = 61.2 bits (147), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 33 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 91
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSN 121
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 92 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDST 140
>gi|74267878|gb|AAI03137.1| FAM125B protein [Bos taurus]
Length = 299
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 48 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 106
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQS 120
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 107 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDS 154
>gi|395824197|ref|XP_003785357.1| PREDICTED: LOW QUALITY PROTEIN: multivesicular body subunit 12B
[Otolemur garnettii]
Length = 304
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 34 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 92
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQS 120
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 93 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDS 140
>gi|348507016|ref|XP_003441053.1| PREDICTED: DNA mismatch repair protein Msh6 [Oreochromis niloticus]
Length = 1381
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 48/76 (63%), Gaps = 7/76 (9%)
Query: 152 PYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGK 207
P+I S +PC T GD +IPN IG C E+G E + + +L+TGPNMGGK
Sbjct: 1105 PFIDLKGSRHPCVTKTFFGDD-FIPNDIFIG-CPGTGENG-EDDSLASCVLVTGPNMGGK 1161
Query: 208 STVMRQLGLITILAQM 223
ST+MRQ GL+ ILAQ+
Sbjct: 1162 STLMRQCGLVIILAQL 1177
>gi|371927595|pdb|3TOW|A Chain A, Crystal Structure Of The Mabp Domain Of Mvb12b Of Human
Escrt-I Complex
Length = 152
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 3 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 61
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSN 121
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 62 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDST 110
>gi|449496462|ref|XP_002196049.2| PREDICTED: DNA mismatch repair protein Msh6 [Taeniopygia guttata]
Length = 1359
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 39/98 (39%), Positives = 54/98 (55%), Gaps = 16/98 (16%)
Query: 135 YQQG----VCVPT-FLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVE 185
Y QG +C P L + P++ S +PC T GD +IPN VIG E
Sbjct: 1065 YSQGGDGPLCRPEILLPRDNARPFLELRNSRHPCITKTFFGDD-FIPNDIVIGIKDEGSS 1123
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
S + + +L+TGPNMGGKST+MRQ GL+ ++AQ+
Sbjct: 1124 S------EASCVLVTGPNMGGKSTLMRQAGLLVVMAQL 1155
>gi|390458373|ref|XP_002743367.2| PREDICTED: multivesicular body subunit 12B [Callithrix jacchus]
Length = 315
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 45 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 103
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQS 120
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 104 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDS 151
>gi|332230037|ref|XP_003264192.1| PREDICTED: multivesicular body subunit 12B [Nomascus leucogenys]
gi|397473158|ref|XP_003808085.1| PREDICTED: multivesicular body subunit 12B [Pan paniscus]
gi|426363062|ref|XP_004048665.1| PREDICTED: multivesicular body subunit 12B [Gorilla gorilla
gorilla]
Length = 304
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 34 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 92
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQS 120
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 93 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDS 140
>gi|297480738|ref|XP_002691631.1| PREDICTED: multivesicular body subunit 12B [Bos taurus]
gi|296482197|tpg|DAA24312.1| TPA: hypothetical protein LOC617416 [Bos taurus]
Length = 304
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 34 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 92
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSN 121
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 93 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDST 141
>gi|221039644|dbj|BAH11585.1| unnamed protein product [Homo sapiens]
Length = 304
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 34 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 92
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQS 120
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 93 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDS 140
>gi|149038961|gb|EDL93181.1| similar to FLJ00022 protein (predicted) [Rattus norvegicus]
Length = 288
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 18 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 76
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQS 120
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 77 GNVLVDMKLIDVKDTLPVGFIPIQETVDTQEVVFRKKRLCIKFIPRDS 124
>gi|402897931|ref|XP_003911990.1| PREDICTED: multivesicular body subunit 12B isoform 2 [Papio anubis]
Length = 304
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 34 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 92
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQS 120
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 93 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDS 140
>gi|307172014|gb|EFN63608.1| Probable DNA mismatch repair protein Msh6 [Camponotus floridanus]
Length = 1117
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 54/94 (57%), Gaps = 13/94 (13%)
Query: 131 LKDMYQQG-VCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGE 189
L D + G +C+P + +I + +PC D +IPN T++ +D S
Sbjct: 841 LADYARNGDMCIPEIHDGLDGEIFIKIRDGKHPCIISD-NFIPNDTLLA--TDDTAS--- 894
Query: 190 GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+++LTGPNMGGKST+MRQ+GLITI+AQ+
Sbjct: 895 ------LMILTGPNMGGKSTLMRQVGLITIMAQI 922
>gi|26352770|dbj|BAC40015.1| unnamed protein product [Mus musculus]
gi|148676659|gb|EDL08606.1| RIKEN cDNA 2610528K11, isoform CRA_b [Mus musculus]
Length = 288
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 18 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 76
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQS 120
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 77 GNVLVDMKLIDVKDTLPVGFIPIQETVDTQEVVFRKKRLCIKFIPRDS 124
>gi|10440373|dbj|BAB15722.1| FLJ00022 protein [Homo sapiens]
Length = 344
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 74 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 132
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSN 121
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 133 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDST 181
>gi|344271904|ref|XP_003407777.1| PREDICTED: multivesicular body subunit 12B-like [Loxodonta
africana]
Length = 317
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 47 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 105
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSN 121
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 106 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDST 154
>gi|58761488|ref|NP_258257.1| multivesicular body subunit 12B isoform 1 [Homo sapiens]
gi|402897929|ref|XP_003911989.1| PREDICTED: multivesicular body subunit 12B isoform 1 [Papio anubis]
gi|114149296|sp|Q9H7P6.2|F125B_HUMAN RecName: Full=Multivesicular body subunit 12B; AltName:
Full=ESCRT-I complex subunit MVB12B; AltName:
Full=Protein FAM125B
gi|119608045|gb|EAW87639.1| chromosome 9 open reading frame 28, isoform CRA_a [Homo sapiens]
gi|119608046|gb|EAW87640.1| chromosome 9 open reading frame 28, isoform CRA_a [Homo sapiens]
gi|380784715|gb|AFE64233.1| multivesicular body subunit 12B isoform 1 [Macaca mulatta]
gi|410287696|gb|JAA22448.1| family with sequence similarity 125, member B [Pan troglodytes]
gi|410343251|gb|JAA40572.1| family with sequence similarity 125, member B [Pan troglodytes]
Length = 319
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 49 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 107
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSN 121
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 108 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDST 156
>gi|58761490|ref|NP_001011703.1| multivesicular body subunit 12B isoform 2 [Homo sapiens]
gi|332832948|ref|XP_001141271.2| PREDICTED: multivesicular body subunit 12B-like [Pan troglodytes]
gi|20379511|gb|AAH28675.1| Family with sequence similarity 125, member B [Homo sapiens]
gi|312152144|gb|ADQ32584.1| family with sequence similarity 125, member B [synthetic construct]
Length = 221
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 49 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 107
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQS 120
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 108 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDS 155
>gi|332024253|gb|EGI64457.1| Putative DNA mismatch repair protein Msh6 [Acromyrmex echinatior]
Length = 1122
Score = 60.8 bits (146), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 34/94 (36%), Positives = 52/94 (55%), Gaps = 13/94 (13%)
Query: 131 LKDMYQQG-VCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGE 189
L D + G +C+P + +I + +PC D +IPN T++
Sbjct: 846 LADYARNGDMCIPEIHDGSDGEIFIKIKDGQHPCIVSDN-FIPNDTLLA----------- 893
Query: 190 GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ + ++LTGPNMGGKST+MRQ+GLITI+AQ+
Sbjct: 894 TDGTASFMILTGPNMGGKSTLMRQMGLITIMAQI 927
>gi|403332270|gb|EJY65139.1| MutS domain III family protein [Oxytricha trifallax]
Length = 1425
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 56/110 (50%), Gaps = 27/110 (24%)
Query: 140 CVPTFLGLEE--PHPYISALESLYPCAT--------GDQT-------------YIPNSTV 176
C P F+ E+ PY+ + +PC QT +IPN T+
Sbjct: 1112 CRPIFIKPEDNFSKPYLELRKMKHPCVNLTFNPVNEQQQTIGFSDEPVFKTSHFIPNDTI 1171
Query: 177 IGR---CKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
IGR ++ + S E N+ P +LLLTGPNMGGKST++RQ L I+AQ+
Sbjct: 1172 IGRLDQSQQHITSNYEDNQ-PNILLLTGPNMGGKSTLLRQTCLAVIIAQI 1220
>gi|194220748|ref|XP_001498011.2| PREDICTED: DNA mismatch repair protein Msh6-like [Equus caballus]
Length = 983
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 11/90 (12%)
Query: 139 VCVPTFLGLEEPHP-YISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRK 193
+C P L EE P ++ S +PC T GD +IPN +IG C+E+ E G K
Sbjct: 696 MCRPLILLPEEDTPPFLYLKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEEENG----K 749
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 750 AYCVLVTGPNMGGKSTLMRQAGLLAVMAQM 779
>gi|403420614|ref|NP_001258161.1| multivesicular body subunit 12B [Rattus norvegicus]
Length = 317
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 47 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 105
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQS 120
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 106 GNVLVDMKLIDVKDTLPVGFIPIQETVDTQEVVFRKKRLCIKFIPRDS 153
>gi|357511353|ref|XP_003625965.1| DNA mismatch repair protein Msh6-1 [Medicago truncatula]
gi|355500980|gb|AES82183.1| DNA mismatch repair protein Msh6-1 [Medicago truncatula]
Length = 1312
Score = 60.5 bits (145), Expect = 5e-07, Method: Composition-based stats.
Identities = 37/100 (37%), Positives = 50/100 (50%), Gaps = 17/100 (17%)
Query: 130 ILKDMYQQGVCVPTFLGL--EEPHPYISALESLYPC----ATGDQTYIPNSTVIGRCKED 183
I D Y+ C P+F+G PYI A +P G ++PN IG
Sbjct: 998 IASDYYEGPTCRPSFVGTLCTNEAPYIYAKSLGHPVLRSDTLGKSAFVPNDITIG----- 1052
Query: 184 VESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G + + +LLTGPNMGGKST++RQ+ L ILAQ+
Sbjct: 1053 ------GPDQASFILLTGPNMGGKSTLLRQVCLAVILAQV 1086
>gi|242000966|ref|XP_002435126.1| sperm protein, putative [Ixodes scapularis]
gi|215498456|gb|EEC07950.1| sperm protein, putative [Ixodes scapularis]
Length = 401
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 46/90 (51%), Gaps = 9/90 (10%)
Query: 139 VCVPTFL--GLEEPHPYISALESLYPC---ATGDQTYIPNSTVIGRCKEDVESGGEGNRK 193
C P L G P +S +PC G + IPNS +G D E R
Sbjct: 160 ACTPRILRDGEVSRTPRLSIQGGRHPCLLKHLGGENLIPNSIALG----DYEDDDSAPRG 215
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ L+TGPNMGGKST+MRQ GL+ I+AQM
Sbjct: 216 ARLALVTGPNMGGKSTLMRQAGLLVIIAQM 245
>gi|40254287|ref|NP_780393.2| multivesicular body subunit 12B [Mus musculus]
gi|114149297|sp|Q6KAU4.2|F125B_MOUSE RecName: Full=Multivesicular body subunit 12B; AltName:
Full=ESCRT-I complex subunit MVB12B; AltName:
Full=Protein FAM125B
gi|37604174|gb|AAH59907.1| Family with sequence similarity 125, member B [Mus musculus]
gi|55930930|gb|AAH49129.2| Family with sequence similarity 125, member B [Mus musculus]
Length = 317
Score = 60.5 bits (145), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 47 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 105
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQS 120
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 106 GNVLVDMKLIDVKDTLPVGFIPIQETVDTQEVVFRKKRLCIKFIPRDS 153
>gi|47847382|dbj|BAD21363.1| mFLJ00022 protein [Mus musculus]
Length = 340
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 70 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 128
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQS 120
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 129 GNVLVDMKLIDVKDTLPVGFIPIQETVDTQEVVFRKKRLCIKFIPRDS 176
>gi|395505755|ref|XP_003757204.1| PREDICTED: uncharacterized protein LOC100928415 [Sarcophilus
harrisii]
Length = 314
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 55/91 (60%), Gaps = 3/91 (3%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 169 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 227
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQ 103
++ ++ +I+ K+T P GF I T+D+ +
Sbjct: 228 GNVLVDMKLIDIKDTLPVGFIPIQETVDTRK 258
>gi|15625580|gb|AAL04170.1|AF412834_1 mismatch repair protein Msh6 [Danio rerio]
Length = 1369
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 152 PYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGK 207
P++ S +PC T GD +IPN IG ++ E+ + +L+TGPNMGGK
Sbjct: 1091 PFLDLRGSRHPCVTKTFFGDD-FIPNDIFIGCPGDEEEAQDDAKALAPCVLVTGPNMGGK 1149
Query: 208 STVMRQLGLITILAQM 223
ST+MRQ GL+ ILAQ+
Sbjct: 1150 STLMRQCGLVVILAQL 1165
>gi|431898834|gb|ELK07204.1| Multivesicular body subunit 12B, partial [Pteropus alecto]
Length = 261
Score = 60.5 bits (145), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 62/108 (57%), Gaps = 3/108 (2%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESL--FQI 72
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S +
Sbjct: 27 PITGVGVVASRNRGPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFSKENSHL 85
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQS 120
++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 86 GNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDS 133
>gi|224128348|ref|XP_002320307.1| predicted protein [Populus trichocarpa]
gi|222861080|gb|EEE98622.1| predicted protein [Populus trichocarpa]
Length = 1288
Score = 60.1 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 38/99 (38%), Positives = 52/99 (52%), Gaps = 15/99 (15%)
Query: 130 ILKDMYQQGVCVPTFLGLEEPHPYISALESLYPCATGDQTYIP--NSTVIGR---CKEDV 184
I D Y+ C PT +G S+L S PC + + P S +G+ D+
Sbjct: 974 IASDFYEGPACCPTIVG--------SSLSSQVPCLSAKKLGHPVLRSDSLGKGAFVPNDI 1025
Query: 185 ESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
GG G + +LLTGPNMGGKST++RQ+ L ILAQ+
Sbjct: 1026 SIGGSGRAR--FILLTGPNMGGKSTLLRQVCLAVILAQI 1062
>gi|432906031|ref|XP_004077496.1| PREDICTED: DNA mismatch repair protein Msh6-like [Oryzias latipes]
Length = 1381
Score = 60.1 bits (144), Expect = 6e-07, Method: Composition-based stats.
Identities = 36/76 (47%), Positives = 49/76 (64%), Gaps = 7/76 (9%)
Query: 152 PYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGK 207
P+I+ + S +PC T GD +IPN IG C + + G E + +L+TGPNMGGK
Sbjct: 1105 PFINLVGSRHPCVTKTFFGDD-FIPNDIYIG-CPGNGD-GLEEEGCASCVLVTGPNMGGK 1161
Query: 208 STVMRQLGLITILAQM 223
ST+MRQ GL+ ILAQ+
Sbjct: 1162 STLMRQCGLVVILAQL 1177
>gi|291408329|ref|XP_002720474.1| PREDICTED: ESCRT-I complex subunit MVB12B [Oryctolagus cuniculus]
Length = 316
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/116 (28%), Positives = 65/116 (56%), Gaps = 5/116 (4%)
Query: 10 IPDDK--PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTE 67
+PD P+T + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++
Sbjct: 39 LPDTSMDPLTGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSF 97
Query: 68 SL--FQIDYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSN 121
S + ++ ++ +I+ K+T P GF I T+D+ + ++ + + P+ S
Sbjct: 98 SKENSHLGNVLVDMKLIDIKDTLPVGFIPIQETVDTQEVAFRKKRLCIKFIPRDST 153
>gi|163790798|ref|ZP_02185224.1| DNA mismatch repair protein [Carnobacterium sp. AT7]
gi|159873978|gb|EDP68056.1| DNA mismatch repair protein [Carnobacterium sp. AT7]
Length = 874
Score = 60.1 bits (144), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 41/73 (56%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCAT---GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
IS +E +P G QTY+PNS +G+ E +LL+TGPNM GKST
Sbjct: 573 ISLIEGRHPVVEKVLGQQTYVPNSVEMGKENE-------------ILLITGPNMSGKSTY 619
Query: 211 MRQLGLITILAQM 223
MRQL L I+AQM
Sbjct: 620 MRQLALTVIMAQM 632
>gi|448087041|ref|XP_004196240.1| Piso0_005692 [Millerozyma farinosa CBS 7064]
gi|359377662|emb|CCE86045.1| Piso0_005692 [Millerozyma farinosa CBS 7064]
Length = 1244
Score = 60.1 bits (144), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 43/84 (51%), Gaps = 14/84 (16%)
Query: 140 CVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLL 199
C PTF+ E + E +PC TG + +IPN V+G CK P + LL
Sbjct: 949 CRPTFI--ESNKGQVEFKELRHPCFTGTKDFIPNDVVLGGCK------------PNIGLL 994
Query: 200 TGPNMGGKSTVMRQLGLITILAQM 223
TG N GKST+MR L IL+Q+
Sbjct: 995 TGANAAGKSTIMRTTALAIILSQI 1018
>gi|402588187|gb|EJW82121.1| MutS domain III family protein, partial [Wuchereria bancrofti]
Length = 764
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 47/73 (64%), Gaps = 16/73 (21%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP ++A+ + TYIPNS ++G GN +P+ +LLTGPNMGGKST+
Sbjct: 649 HPSLAAM----AVSGVSFTYIPNSVLLG-----------GN-EPSTILLTGPNMGGKSTL 692
Query: 211 MRQLGLITILAQM 223
MRQ+G++ +LAQ+
Sbjct: 693 MRQVGVLVVLAQI 705
>gi|340713019|ref|XP_003395049.1| PREDICTED: probable DNA mismatch repair protein Msh6-like [Bombus
terrestris]
Length = 1130
Score = 59.7 bits (143), Expect = 8e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 12/85 (14%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLL 198
+C+P + +I + +PC D T+IPN+T++G + ++
Sbjct: 863 MCIPEVNDGTDKRVFIDIRDGWHPCIISD-TFIPNNTLLG-----------TENSASFMI 910
Query: 199 LTGPNMGGKSTVMRQLGLITILAQM 223
LTGPNMGGKST+MRQ+ L+TI+ Q+
Sbjct: 911 LTGPNMGGKSTLMRQVALLTIMTQI 935
>gi|268564536|ref|XP_002639138.1| C. briggsae CBR-MSH-6 protein [Caenorhabditis briggsae]
Length = 1185
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 34/93 (36%), Positives = 48/93 (51%), Gaps = 21/93 (22%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPC--------ATGDQTYIPNSTVIGRCKEDVESGGEG 190
+ +P F E PY+ + L+PC T ++I NST +G+ +
Sbjct: 904 MTMPEF-DFESAKPYLIVEKGLHPCLALQSRNEVTQTTSFIANSTTMGQTE--------- 953
Query: 191 NRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
V+LLTGPNMGGKST+MRQ ++ ILA M
Sbjct: 954 ---AAVMLLTGPNMGGKSTLMRQTAVLAILAHM 983
>gi|308505948|ref|XP_003115157.1| CRE-MSH-6 protein [Caenorhabditis remanei]
gi|308259339|gb|EFP03292.1| CRE-MSH-6 protein [Caenorhabditis remanei]
Length = 1181
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 50/93 (53%), Gaps = 21/93 (22%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPC--------ATGDQTYIPNSTVIGRCKEDVESGGEG 190
+C+P F + PY+ + ++PC T ++I NST++G
Sbjct: 895 MCMPEF-DFDSTKPYLVVEKGVHPCLALQSRNEVTQTTSFIANSTMMGE----------- 942
Query: 191 NRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++ V+LLTGPNMGGKST+MRQ ++ ILA +
Sbjct: 943 -KEAAVMLLTGPNMGGKSTLMRQTAVLAILAHI 974
>gi|350419676|ref|XP_003492265.1| PREDICTED: probable DNA mismatch repair protein Msh6-like [Bombus
impatiens]
Length = 1129
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 12/85 (14%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLL 198
+C+P + +I + +PC D T+IPN+T++G + ++
Sbjct: 862 MCIPEVNDGTDERVFIDIRDGWHPCIISD-TFIPNNTLLG-----------TENSASFMI 909
Query: 199 LTGPNMGGKSTVMRQLGLITILAQM 223
LTGPNMGGKST+MRQ+ L+TI+ Q+
Sbjct: 910 LTGPNMGGKSTLMRQVALLTIMTQI 934
>gi|47210369|emb|CAF90230.1| unnamed protein product [Tetraodon nigroviridis]
Length = 417
Score = 59.7 bits (143), Expect = 9e-07, Method: Compositional matrix adjust.
Identities = 30/91 (32%), Positives = 54/91 (59%), Gaps = 3/91 (3%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSK--TESLFQI 72
PIT + V+ + P+GY V+S T D DAD+W++ F + TRYLC ++ ++ +
Sbjct: 20 PITGVGVVASRNRAPAGYDVVSTTTD-GLDADLWKDGLFKSKVTRYLCFTRVFSKENSHL 78
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQ 103
++ ++ +I+ K+T P GF I T+D+ +
Sbjct: 79 GNVLVDMKLIDIKDTLPVGFIPIQETVDTRK 109
>gi|303280413|ref|XP_003059499.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459335|gb|EEH56631.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1434
Score = 59.7 bits (143), Expect = 9e-07, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 47/90 (52%), Gaps = 15/90 (16%)
Query: 140 CVPTFL---GLEEPHPYISALESLYPCA---TGDQTYIPNSTVIGRCKEDVESGGEGNRK 193
C P L E+ P +SA +P +G + ++PN T +G GE
Sbjct: 1134 CTPVLLPPPSTEDAKPSLSASRLTHPTVGAMSGGKAFVPNDTFLG---------GETPAS 1184
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
P LLLTGPNMGGKST++RQ+ L ++A +
Sbjct: 1185 PPFLLLTGPNMGGKSTLLRQVCLAAVMAHV 1214
>gi|410954737|ref|XP_003984018.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 2 [Felis catus]
Length = 1228
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 11/89 (12%)
Query: 139 VCVPTFLGLEEPHP-YISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRK 193
+C P L EE P ++ S +PC T GD +IPN +IG +E+ ESG K
Sbjct: 941 MCRPVILFPEEDTPPFLDLRGSRHPCITKTFFGDD-FIPNDILIGCEEEEEESG-----K 994
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
+L+TGPNMGGKST+MRQ GL+ ++AQ
Sbjct: 995 AYCVLVTGPNMGGKSTLMRQAGLLAVMAQ 1023
>gi|410954735|ref|XP_003984017.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 1 [Felis catus]
Length = 1359
Score = 59.7 bits (143), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 11/89 (12%)
Query: 139 VCVPTFLGLEEPHP-YISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRK 193
+C P L EE P ++ S +PC T GD +IPN +IG +E+ ESG K
Sbjct: 1072 MCRPVILFPEEDTPPFLDLRGSRHPCITKTFFGDD-FIPNDILIGCEEEEEESG-----K 1125
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
+L+TGPNMGGKST+MRQ GL+ ++AQ
Sbjct: 1126 AYCVLVTGPNMGGKSTLMRQAGLLAVMAQ 1154
>gi|356572787|ref|XP_003554547.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Glycine max]
Length = 1269
Score = 59.3 bits (142), Expect = 1e-06, Method: Composition-based stats.
Identities = 36/100 (36%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Query: 130 ILKDMYQQGVCVPTFLGL--EEPHPYISALESLYPCATGDQ----TYIPNSTVIGRCKED 183
I D Y+ C P+F+G + PY+ A +P D ++PN IG
Sbjct: 956 IAGDYYEGPTCRPSFVGTLCTKEAPYLHAKSLGHPVLRSDTLGKGDFVPNDITIG----- 1010
Query: 184 VESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G+ + +LLTGPNMGGKST++RQ+ L ILAQ+
Sbjct: 1011 ------GSDHASFILLTGPNMGGKSTLLRQVCLTVILAQV 1044
>gi|349605223|gb|AEQ00532.1| DNA mismatch repair protein Msh6-like protein, partial [Equus
caballus]
Length = 277
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/90 (45%), Positives = 55/90 (61%), Gaps = 11/90 (12%)
Query: 139 VCVPTFLGLEEPHP-YISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRK 193
+C P L EE P ++ S +PC T GD +IPN +IG C+E+ E G K
Sbjct: 157 MCRPLILLPEEDTPPFLYLKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEEENG----K 210
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 211 AYCVLVTGPNMGGKSTLMRQAGLLAVMAQM 240
>gi|417413734|gb|JAA53181.1| Putative mismatch repair atpase msh2 muts family, partial [Desmodus
rotundus]
Length = 1280
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 55/97 (56%), Gaps = 13/97 (13%)
Query: 135 YQQG----VCVPTFLGLEEPHPYISALE-SLYPCATG---DQTYIPNSTVIGRCKEDVES 186
Y QG +C P L ++ P L+ S +PC T +IPN VIG C+E+ E
Sbjct: 985 YSQGGDGPMCRPVILLPKDDAPVFLDLKGSRHPCITKTFFGAEFIPNDIVIG-CEEEEEE 1043
Query: 187 GGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G +L+TGPNMGGKST+MRQ GL+ +LAQM
Sbjct: 1044 NGNA----YCVLVTGPNMGGKSTLMRQAGLLAVLAQM 1076
>gi|33504503|ref|NP_878280.1| DNA mismatch repair protein Msh6 [Danio rerio]
gi|27882481|gb|AAH44350.1| MutS homolog 6 (E. coli) [Danio rerio]
Length = 1369
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 46/76 (60%), Gaps = 5/76 (6%)
Query: 152 PYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGK 207
P++ S +PC T GD +IPN IG ++ E+ + +L+TGPNMGGK
Sbjct: 1091 PFLDLRGSRHPCVTKTFFGDD-FIPNDIFIGCPGDEEEAQDDTKALAPCVLVTGPNMGGK 1149
Query: 208 STVMRQLGLITILAQM 223
ST+MRQ GL+ ILAQ+
Sbjct: 1150 STLMRQCGLVVILAQL 1165
>gi|335285527|ref|XP_003354884.1| PREDICTED: DNA mismatch repair protein Msh6-like [Sus scrofa]
Length = 1362
Score = 59.3 bits (142), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/91 (45%), Positives = 56/91 (61%), Gaps = 13/91 (14%)
Query: 139 VCVPTFL--GLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNR 192
+C P L G + P P++ S +PC T GD +IPN +IG C+E+ E N
Sbjct: 1075 MCRPVILLPGEDTP-PFLYLKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEEE----ND 1127
Query: 193 KPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
K +L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 1128 KAYCVLVTGPNMGGKSTLMRQAGLLAVMAQM 1158
>gi|341887020|gb|EGT42955.1| hypothetical protein CAEBREN_13621 [Caenorhabditis brenneri]
gi|341903870|gb|EGT59805.1| hypothetical protein CAEBREN_11565 [Caenorhabditis brenneri]
Length = 280
Score = 58.9 bits (141), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 58/108 (53%), Gaps = 4/108 (3%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFL-RKTRYLCVSKT---ESLF 70
PITA+ +I D K P G+ I+K D ++AD+WR+ F + R+ RY+C S ++
Sbjct: 16 PITAMCIIADKNKAPRGFVPITKCQDDQSEADLWRDGFFTISRQVRYICTSTEIPDSNIR 75
Query: 71 QIDYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQ 118
++ N+ I+ E + P G+ I T DS + + ++ + +P+
Sbjct: 76 TPVQVITNLIIVRESDPIPHGYVAIDYTADSREKSLRKKYVCIRTEPR 123
>gi|17538466|ref|NP_501302.1| Protein MVB-12 [Caenorhabditis elegans]
gi|351049633|emb|CCD63304.1| Protein MVB-12 [Caenorhabditis elegans]
Length = 277
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/108 (31%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFL-RKTRYLCVSKTESLFQID 73
PITAI ++ D K P G+ I K D T+AD+WR+ F + R+ RY+C S I
Sbjct: 16 PITAICIVADKNKAPRGFLPIIKCQDDQTEADLWRDGFFTINRQVRYICTSTEIPDSNIK 75
Query: 74 Y---IVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQ 118
++ N+ I+ E + P G+ I T DS + + ++ + +P+
Sbjct: 76 TPVQVITNLIIVRESDPIPHGYVAIDYTADSREKSLRKKYVCIRTEPR 123
>gi|358331875|dbj|GAA50639.1| DNA mismatch repair protein MSH6 [Clonorchis sinensis]
Length = 503
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/91 (41%), Positives = 51/91 (56%), Gaps = 14/91 (15%)
Query: 140 CVPTFLGLE--EPHPYISALESLYPC-----ATGDQTYIPNSTVIGRCKEDVESGGEGNR 192
C P F+ L P++ ++ L+PC + GD IPN T +G +S GN
Sbjct: 205 CRPEFIDLTNGSQQPFLEIVDGLHPCLINTFSGGD--LIPNDTRLGI----TDSNDPGN- 257
Query: 193 KPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
P LL+TGPNMGGKST+MRQ L+ ILA +
Sbjct: 258 IPLTLLVTGPNMGGKSTLMRQTALLVILAHL 288
>gi|301753267|ref|XP_002912469.1| PREDICTED: DNA mismatch repair protein Msh6-like [Ailuropoda
melanoleuca]
gi|281352643|gb|EFB28227.1| hypothetical protein PANDA_000220 [Ailuropoda melanoleuca]
Length = 1362
Score = 58.9 bits (141), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/89 (44%), Positives = 54/89 (60%), Gaps = 11/89 (12%)
Query: 139 VCVPTFLGLEEPHP-YISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRK 193
+C P L EE P ++ S +PC T GD +IPN +IG C+E+ E G K
Sbjct: 1075 MCRPVILLPEEGTPPFLDLRGSRHPCITKTFFGDD-FIPNDILIG-CEEEEEENG----K 1128
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
+L+TGPNMGGKST+MRQ GL+ ++AQ
Sbjct: 1129 AYCVLVTGPNMGGKSTLMRQAGLLAVMAQ 1157
>gi|297814117|ref|XP_002874942.1| hypothetical protein ARALYDRAFT_912022 [Arabidopsis lyrata subsp.
lyrata]
gi|297320779|gb|EFH51201.1| hypothetical protein ARALYDRAFT_912022 [Arabidopsis lyrata subsp.
lyrata]
Length = 1326
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 52/96 (54%), Gaps = 16/96 (16%)
Query: 133 DMYQQGVCVPTFLG-LEEPHPYISALESLYPCATGDQ----TYIPNSTVIGRCKEDVESG 187
D Y+ C P G + P++SA +P GD +++PN+ IG
Sbjct: 1023 DSYEGVRCRPVISGSTSDDVPHLSATGLGHPVLRGDTLGRGSFVPNNVKIG--------- 1073
Query: 188 GEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G+ K + +LLTGPNMGGKST++RQ+ L ILAQ+
Sbjct: 1074 --GSEKASFILLTGPNMGGKSTLLRQVCLAVILAQI 1107
>gi|301611818|ref|XP_002935421.1| PREDICTED: DNA mismatch repair protein Msh6 [Xenopus (Silurana)
tropicalis]
Length = 1338
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/120 (35%), Positives = 67/120 (55%), Gaps = 14/120 (11%)
Query: 114 DYKPQQSNNTIFSQRNILKDM--YQQG----VCVPTFLGLEEPHPYISALESLYPCAT-- 165
+YK Q+ F+ ++L + Y QG VC P + + P++ S +PC T
Sbjct: 1021 NYKEWQTAVECFAVLDVLISLSQYSQGGDGPVCRPVIVLQDNHLPFLELKGSRHPCITKT 1080
Query: 166 --GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
GD +IPN +IG CKE+ + + + +L+TGPNMGGKST++RQ GL ++AQ+
Sbjct: 1081 FFGDD-FIPNDILIG-CKEEDSD--DSSDEAHCVLVTGPNMGGKSTLLRQAGLQVVMAQL 1136
>gi|403332180|gb|EJY65086.1| MutS domain III family protein [Oxytricha trifallax]
Length = 1185
Score = 58.5 bits (140), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 53/90 (58%), Gaps = 16/90 (17%)
Query: 139 VCVPTFLGLEEPHPYISAL---ESLYPCATGDQT--YIPNSTVIGRCKEDVESGGEGNRK 193
+C P F+G + + S L + +PC T +QT ++PN+T++ N+
Sbjct: 915 MCRPQFVGYQGEYANSSLLDIKQLRHPCVTLNQTKSFVPNNTLLA-----------PNQD 963
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
T+LL+TGPNMGGKST++RQ + ILAQ+
Sbjct: 964 QTLLLVTGPNMGGKSTLLRQTCIAVILAQI 993
>gi|223998298|ref|XP_002288822.1| MutS family [Thalassiosira pseudonana CCMP1335]
gi|220975930|gb|EED94258.1| MutS family [Thalassiosira pseudonana CCMP1335]
Length = 1099
Score = 58.5 bits (140), Expect = 2e-06, Method: Composition-based stats.
Identities = 35/81 (43%), Positives = 50/81 (61%), Gaps = 7/81 (8%)
Query: 147 LEEPHPYISALESLYPCA----TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGP 202
L P I ++ +PC +GD +IPN +G K ++ + N + +VLLL+GP
Sbjct: 852 LPNTKPGIKVVQGRHPCVGITHSGDD-FIPNDLTLGG-KMGLDEN-DSNDESSVLLLSGP 908
Query: 203 NMGGKSTVMRQLGLITILAQM 223
NMGGKST++RQ LITILAQ+
Sbjct: 909 NMGGKSTLLRQTCLITILAQI 929
>gi|383847693|ref|XP_003699487.1| PREDICTED: probable DNA mismatch repair protein Msh6-like
[Megachile rotundata]
Length = 1125
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 30/85 (35%), Positives = 48/85 (56%), Gaps = 12/85 (14%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLL 198
+CVP + + +I + +PC D ++IPN T++G + ++
Sbjct: 858 MCVPEIVSDTDGEIFIEIRDGRHPCILSD-SFIPNDTLLGI-----------GDSASFMI 905
Query: 199 LTGPNMGGKSTVMRQLGLITILAQM 223
LTGPNMGGKST+MRQ+ L+TI+ Q+
Sbjct: 906 LTGPNMGGKSTLMRQVALLTIMTQI 930
>gi|334186287|ref|NP_001190656.1| DNA mismatch repair protein Msh6-1 [Arabidopsis thaliana]
gi|332656720|gb|AEE82120.1| DNA mismatch repair protein Msh6-1 [Arabidopsis thaliana]
Length = 1321
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 16/96 (16%)
Query: 133 DMYQQGVCVPTFLG-LEEPHPYISALESLYPCATGDQ----TYIPNSTVIGRCKEDVESG 187
D Y+ C P G + P++SA +P GD +++PN+ IG
Sbjct: 1018 DSYEGVRCRPVISGSTSDGVPHLSATGLGHPVLRGDSLGRGSFVPNNVKIG--------- 1068
Query: 188 GEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G K + +LLTGPNMGGKST++RQ+ L ILAQ+
Sbjct: 1069 --GAEKASFILLTGPNMGGKSTLLRQVCLAVILAQI 1102
>gi|15235223|ref|NP_192116.1| DNA mismatch repair protein Msh6-1 [Arabidopsis thaliana]
gi|6226648|sp|O04716.2|MSH6_ARATH RecName: Full=DNA mismatch repair protein MSH6; Short=AtMSH6;
AltName: Full=MutS protein homolog 6
gi|3912921|gb|AAC78699.1| G/T DNA mismatch repair enzyme [Arabidopsis thaliana]
gi|5763966|emb|CAB53337.1| mismatch repair protein msh6-1 [Arabidopsis thaliana]
gi|7268591|emb|CAB80700.1| G/T DNA mismatch repair enzyme [Arabidopsis thaliana]
gi|332656719|gb|AEE82119.1| DNA mismatch repair protein Msh6-1 [Arabidopsis thaliana]
Length = 1324
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 16/96 (16%)
Query: 133 DMYQQGVCVPTFLG-LEEPHPYISALESLYPCATGDQ----TYIPNSTVIGRCKEDVESG 187
D Y+ C P G + P++SA +P GD +++PN+ IG
Sbjct: 1021 DSYEGVRCRPVISGSTSDGVPHLSATGLGHPVLRGDSLGRGSFVPNNVKIG--------- 1071
Query: 188 GEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G K + +LLTGPNMGGKST++RQ+ L ILAQ+
Sbjct: 1072 --GAEKASFILLTGPNMGGKSTLLRQVCLAVILAQI 1105
>gi|2104549|gb|AAB57798.1| AGAA.3 [Arabidopsis thaliana]
Length = 1362
Score = 58.2 bits (139), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 16/96 (16%)
Query: 133 DMYQQGVCVPTFLG-LEEPHPYISALESLYPCATGDQ----TYIPNSTVIGRCKEDVESG 187
D Y+ C P G + P++SA +P GD +++PN+ IG
Sbjct: 1059 DSYEGVRCRPVISGSTSDGVPHLSATGLGHPVLRGDSLGRGSFVPNNVKIG--------- 1109
Query: 188 GEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G K + +LLTGPNMGGKST++RQ+ L ILAQ+
Sbjct: 1110 --GAEKASFILLTGPNMGGKSTLLRQVCLAVILAQI 1143
>gi|380011142|ref|XP_003689671.1| PREDICTED: probable DNA mismatch repair protein Msh6-like [Apis
florea]
Length = 1126
Score = 57.8 bits (138), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 33/85 (38%), Positives = 48/85 (56%), Gaps = 12/85 (14%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLL 198
+CVP +I + +PC D T+IPN T++ E+ S ++
Sbjct: 859 MCVPEINDGTNEKIFIDIRDGRHPCIISD-TFIPNDTLLA--TENFAS---------FMI 906
Query: 199 LTGPNMGGKSTVMRQLGLITILAQM 223
LTGPNMGGKST+MRQ+ L+TI+AQ+
Sbjct: 907 LTGPNMGGKSTLMRQVALLTIMAQI 931
>gi|324501049|gb|ADY40473.1| DNA mismatch repair protein Msh6 [Ascaris suum]
Length = 1219
Score = 57.8 bits (138), Expect = 4e-06, Method: Composition-based stats.
Identities = 33/95 (34%), Positives = 48/95 (50%), Gaps = 23/95 (24%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPC----------ATGDQTYIPNSTVIGRCKEDVESGG 188
+C P F+ + P + + +PC + YIPN T +G
Sbjct: 936 MCRPEFV-YDSEKPLLDIVAGYHPCLAAKISAAKEGGANTNYIPNDTQLG---------- 984
Query: 189 EGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
GN P +LLTGPNMGGKST+MRQ+ ++ +LAQ+
Sbjct: 985 -GNH-PLTMLLTGPNMGGKSTLMRQVAVLVVLAQI 1017
>gi|431912701|gb|ELK14719.1| DNA mismatch repair protein Msh6 [Pteropus alecto]
Length = 1172
Score = 57.8 bits (138), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 39/90 (43%), Positives = 55/90 (61%), Gaps = 11/90 (12%)
Query: 139 VCVPTFLGLEEPHPYISALE-SLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRK 193
+C P L +E P L+ S +PC + GD +IPN +IG C+E+ E G +
Sbjct: 885 MCRPVILLPKEDTPVFLDLKGSRHPCISKTFFGDD-FIPNDILIG-CEEEEEENG----R 938
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L+TGPNMGGKST+MRQ GL+ ++AQM
Sbjct: 939 AYCVLVTGPNMGGKSTLMRQAGLLAVMAQM 968
>gi|344245100|gb|EGW01204.1| DNA mismatch repair protein Msh6 [Cricetulus griseus]
Length = 1260
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 57/98 (58%), Gaps = 15/98 (15%)
Query: 135 YQQG----VCVPT-FLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVE 185
Y QG +C P L E+ HP++ S +PC T GD +IPN +IG +E E
Sbjct: 965 YSQGGDGPMCRPVILLPGEDTHPFLELKGSRHPCVTKTFFGDD-FIPNDILIGCEEEGEE 1023
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ K +L+TGPNMGGKST++RQ GL+ ++AQ+
Sbjct: 1024 N-----GKAYCVLVTGPNMGGKSTLIRQAGLLAVMAQL 1056
>gi|354474750|ref|XP_003499593.1| PREDICTED: DNA mismatch repair protein Msh6 [Cricetulus griseus]
Length = 1297
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 15/98 (15%)
Query: 135 YQQG----VCVPT-FLGLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVE 185
Y QG +C P L E+ HP++ S +PC T GD +IPN +I E
Sbjct: 1002 YSQGGDGPMCRPVILLPGEDTHPFLELKGSRHPCVTKTFFGDD-FIPNDILI-----GCE 1055
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
GE N K +L+TGPNMGGKST++RQ GL+ ++AQ+
Sbjct: 1056 EEGEENGKAYCVLVTGPNMGGKSTLIRQAGLLAVMAQL 1093
>gi|242044644|ref|XP_002460193.1| hypothetical protein SORBIDRAFT_02g024370 [Sorghum bicolor]
gi|241923570|gb|EER96714.1| hypothetical protein SORBIDRAFT_02g024370 [Sorghum bicolor]
Length = 638
Score = 57.4 bits (137), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 49/82 (59%), Gaps = 17/82 (20%)
Query: 142 PTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTG 201
PTF HP + + +SL G +++PN DV+ GG GN P+ ++LTG
Sbjct: 345 PTFHARNLGHPILRS-DSL-----GKGSFVPN---------DVKIGGSGN--PSFIVLTG 387
Query: 202 PNMGGKSTVMRQLGLITILAQM 223
PNMGGKST++RQ+ L ILAQ+
Sbjct: 388 PNMGGKSTLLRQVCLTIILAQI 409
>gi|339484817|ref|YP_004696603.1| DNA mismatch repair protein mutS [Nitrosomonas sp. Is79A3]
gi|338806962|gb|AEJ03204.1| DNA mismatch repair protein mutS [Nitrosomonas sp. Is79A3]
Length = 866
Score = 57.4 bits (137), Expect = 5e-06, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 44/77 (57%), Gaps = 2/77 (2%)
Query: 146 GLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMG 205
L+ PY+S E ++ TG + S V DV+ G + KP +L++TGPNMG
Sbjct: 566 ALDYTAPYLSH-EEIFEIDTGRHPVV-ESQVENFVANDVQLGADYTGKPQMLIITGPNMG 623
Query: 206 GKSTVMRQLGLITILAQ 222
GKST MRQ+ LI +LA
Sbjct: 624 GKSTYMRQIALIALLAH 640
>gi|403350104|gb|EJY74495.1| MutS domain III family protein [Oxytricha trifallax]
Length = 1292
Score = 57.4 bits (137), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 44/84 (52%), Gaps = 18/84 (21%)
Query: 152 PYISALESLYPCAT------------GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLL 199
PYI + +PC + +IPN V+G K E + P +LL+
Sbjct: 1035 PYIELRQMRHPCVEEQMAKSSLLSYQAPKRFIPNDCVMGTLKNSEE------KHPNILLI 1088
Query: 200 TGPNMGGKSTVMRQLGLITILAQM 223
TGPNMGGKST++RQ L +I+AQ+
Sbjct: 1089 TGPNMGGKSTLLRQTCLASIMAQI 1112
>gi|328779790|ref|XP_392346.4| PREDICTED: probable DNA mismatch repair protein Msh6 [Apis
mellifera]
Length = 1129
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 48/85 (56%), Gaps = 12/85 (14%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLL 198
+C+P +I + +PC D T+IPN T++ E+ S ++
Sbjct: 862 MCIPEINDGTNEKIFIDIRDGRHPCIISD-TFIPNDTLLA--TENFAS---------FMI 909
Query: 199 LTGPNMGGKSTVMRQLGLITILAQM 223
LTGPNMGGKST+MRQ+ L+TI+AQ+
Sbjct: 910 LTGPNMGGKSTLMRQVALLTIMAQI 934
>gi|308492990|ref|XP_003108685.1| CRE-MVB-12 protein [Caenorhabditis remanei]
gi|308248425|gb|EFO92377.1| CRE-MVB-12 protein [Caenorhabditis remanei]
Length = 342
Score = 57.0 bits (136), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/108 (29%), Positives = 55/108 (50%), Gaps = 4/108 (3%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFL-RKTRYLCVSKTESLFQID 73
PITA+ ++ D K P G+ I K D +AD+WR+ F + R+ RY+C S I
Sbjct: 79 PITAMCIVADKSKAPRGFVPIVKCQDDQAEADLWRDGFFTINRQVRYICTSTEIPDSNIK 138
Query: 74 Y---IVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQ 118
++ N+ I+ E + P G+ I T DS + + ++ + +P+
Sbjct: 139 TPVQVITNLIIVRESDPIPHGYVAIDYTADSREKSLRKKYVCIRTEPR 186
>gi|403365718|gb|EJY82649.1| DNA repair protein, putative [Oxytricha trifallax]
Length = 1348
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 22/101 (21%)
Query: 135 YQQGVCVPTFLGLE---EPHPYISALESLYPCATGDQT---------YIPNSTVIGRCKE 182
+Q +C P FL E Y+ + +PC Q ++PN T+I K
Sbjct: 962 HQAPMCRPQFLKYEGRYRKKAYLELRQMRHPCIDLKQAQKSEKQQKKFVPNDTLINNSKS 1021
Query: 183 DVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ +LL+TGPNMGGKST++RQ L ILAQ+
Sbjct: 1022 NTR----------ILLVTGPNMGGKSTLLRQTCLAVILAQI 1052
>gi|321469768|gb|EFX80747.1| putative MSH6, mismatch repair ATPase [Daphnia pulex]
Length = 1310
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 34/92 (36%), Positives = 53/92 (57%), Gaps = 7/92 (7%)
Query: 137 QGVCVPTFL--GLEEPHPYISALESLYPCAT---GDQTYIPNSTVIGRCKEDVESGGEGN 191
Q VC P + G + P++ ++ +P + + +IPN IG + +S + +
Sbjct: 1020 QKVCRPRIIPPGSNQ-RPFLRLIQGRHPAHSQQFANSEFIPNDVTIGSGVVE-QSDSQVD 1077
Query: 192 RKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++ L+TGPNMGGKST+MRQ+GL ILAQM
Sbjct: 1078 ADHSLTLVTGPNMGGKSTLMRQVGLCVILAQM 1109
>gi|19075844|ref|NP_588344.1| DNA mismatch repair protein [Schizosaccharomyces pombe 972h-]
gi|39931686|sp|O74502.1|MSH6_SCHPO RecName: Full=DNA mismatch repair protein msh6
gi|6644186|gb|AAF20943.1|AF207839_1 mismatch repair protein Msh6 [Schizosaccharomyces pombe]
gi|3581916|emb|CAA20855.1| MutS protein homolog [Schizosaccharomyces pombe]
Length = 1254
Score = 57.0 bits (136), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 31/86 (36%), Positives = 48/86 (55%), Gaps = 16/86 (18%)
Query: 140 CVPTFLGLEEPHPYISALESLYPC--ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVL 197
C P + ++ H Y L +PC A+ T++PN V+G GE P ++
Sbjct: 975 CRPEIIEQKDGHLYFEELR--HPCINASAASTFVPNDVVLG---------GES---PNMI 1020
Query: 198 LLTGPNMGGKSTVMRQLGLITILAQM 223
+LTGPNM GKST++RQ+ + I+AQ+
Sbjct: 1021 VLTGPNMAGKSTLLRQVCIAVIMAQL 1046
>gi|327287058|ref|XP_003228246.1| PREDICTED: multivesicular body subunit 12B-like [Anolis
carolinensis]
Length = 278
Score = 57.0 bits (136), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 28/89 (31%), Positives = 53/89 (59%), Gaps = 3/89 (3%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSK--TESLFQI 72
PIT + V+ + P+ Y V+++T D DAD+W++ F + TRYLC ++ ++ +
Sbjct: 49 PITGVGVVASRNRAPTNYDVVAQTTD-GLDADLWKDGLFKSKVTRYLCFTRIFSKENSHL 107
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDS 101
++ ++ +I+ K+T P GF I T+D+
Sbjct: 108 GNVLVDMKLIDIKDTLPVGFIPIQETMDT 136
>gi|403351679|gb|EJY75335.1| DNA repair protein, putative [Oxytricha trifallax]
Length = 1227
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 48/101 (47%), Gaps = 22/101 (21%)
Query: 135 YQQGVCVPTFLGLE---EPHPYISALESLYPCATGDQT---------YIPNSTVIGRCKE 182
+Q +C P FL E Y+ + +PC Q ++PN T+I K
Sbjct: 841 HQAPMCRPQFLKYEGRYRKKAYLELRQMRHPCIDLKQAQKSEKQQKKFVPNDTLINNSKS 900
Query: 183 DVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ +LL+TGPNMGGKST++RQ L ILAQ+
Sbjct: 901 NTR----------ILLVTGPNMGGKSTLLRQTCLAVILAQI 931
>gi|298710503|emb|CBJ25567.1| MutS protein homolog 6 [Ectocarpus siliculosus]
Length = 1372
Score = 56.6 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 35/101 (34%), Positives = 50/101 (49%), Gaps = 10/101 (9%)
Query: 124 IFSQRNILKDMYQQGVCVPTFLGLEEP-HPYISALESLYPCATGDQTYIPNSTVIGRCKE 182
+ +Q + + G P+F+ L+ HP L Y YIPN +G
Sbjct: 1062 VSAQPGFSRPRFHDGASTPSFIRLKNARHP---CLAQTYQGGE----YIPNDATLGAAPA 1114
Query: 183 DVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ + P +LLLTGPNMGGKST++RQ L+ ILAQ+
Sbjct: 1115 GISD--DAPAAPNMLLLTGPNMGGKSTLLRQTCLVAILAQV 1153
>gi|147861780|emb|CAN78918.1| hypothetical protein VITISV_032225 [Vitis vinifera]
Length = 1349
Score = 56.6 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 17/100 (17%)
Query: 130 ILKDMYQQGVCVPTFLGLEEPH--PYISALESLYPC----ATGDQTYIPNSTVIGRCKED 183
I D Y+ C P GL + P +A +P + G T++PN IG
Sbjct: 1027 IANDYYEGPTCRPVISGLSNSNEVPCFTAKSLGHPVLRSDSLGKGTFVPNDITIG----- 1081
Query: 184 VESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G+ +LLTGPNMGGKST++RQ+ L ILAQ+
Sbjct: 1082 ------GSDHACFILLTGPNMGGKSTLLRQVCLAVILAQV 1115
>gi|297743972|emb|CBI36942.3| unnamed protein product [Vitis vinifera]
Length = 1237
Score = 56.6 bits (135), Expect = 7e-06, Method: Composition-based stats.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 17/100 (17%)
Query: 130 ILKDMYQQGVCVPTFLGLEEPH--PYISALESLYPC----ATGDQTYIPNSTVIGRCKED 183
I D Y+ C P GL + P +A +P + G T++PN IG
Sbjct: 914 IANDYYEGPTCRPVISGLSNSNEVPCFTAKSLGHPVLRSDSLGKGTFVPNDITIG----- 968
Query: 184 VESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G+ +LLTGPNMGGKST++RQ+ L ILAQ+
Sbjct: 969 ------GSDHACFILLTGPNMGGKSTLLRQVCLAVILAQV 1002
>gi|328957012|ref|YP_004374398.1| DNA mismatch repair protein MutS [Carnobacterium sp. 17-4]
gi|328673336|gb|AEB29382.1| DNA mismatch repair protein MutS [Carnobacterium sp. 17-4]
Length = 874
Score = 56.6 bits (135), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCAT---GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
IS +E +P G QTY+PNS E ++ +LL+TGPNM GKST
Sbjct: 573 ISLIEGRHPVVEKVLGQQTYVPNSV-------------EMDQDNEILLITGPNMSGKSTY 619
Query: 211 MRQLGLITILAQM 223
MRQL L I+AQM
Sbjct: 620 MRQLALTVIMAQM 632
>gi|225437545|ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Vitis vinifera]
Length = 1297
Score = 56.6 bits (135), Expect = 8e-06, Method: Composition-based stats.
Identities = 36/100 (36%), Positives = 49/100 (49%), Gaps = 17/100 (17%)
Query: 130 ILKDMYQQGVCVPTFLGLEEPH--PYISALESLYPC----ATGDQTYIPNSTVIGRCKED 183
I D Y+ C P GL + P +A +P + G T++PN IG
Sbjct: 974 IANDYYEGPTCRPVISGLSNSNEVPCFTAKSLGHPVLRSDSLGKGTFVPNDITIG----- 1028
Query: 184 VESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G+ +LLTGPNMGGKST++RQ+ L ILAQ+
Sbjct: 1029 ------GSDHACFILLTGPNMGGKSTLLRQVCLAVILAQV 1062
>gi|397581604|gb|EJK51986.1| hypothetical protein THAOC_28787, partial [Thalassiosira oceanica]
Length = 1721
Score = 56.6 bits (135), Expect = 9e-06, Method: Composition-based stats.
Identities = 31/79 (39%), Positives = 47/79 (59%), Gaps = 7/79 (8%)
Query: 152 PYISALESLYPCATGDQT---YIPNSTVIGRCKEDVESGGEGNRKP----TVLLLTGPNM 204
P I ++ +PC + +IPN V+G E+ + + P +VLLL+GPNM
Sbjct: 1416 PGIEVIQGRHPCVDRTHSGADFIPNDLVLGARFENEDDAFGDDSAPRDEASVLLLSGPNM 1475
Query: 205 GGKSTVMRQLGLITILAQM 223
GGKST++RQ LI+I+AQ+
Sbjct: 1476 GGKSTLLRQTCLISIMAQI 1494
>gi|255548475|ref|XP_002515294.1| ATP binding protein, putative [Ricinus communis]
gi|223545774|gb|EEF47278.1| ATP binding protein, putative [Ricinus communis]
Length = 1306
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 48/99 (48%), Gaps = 16/99 (16%)
Query: 130 ILKDMYQQGVCVPTFLGLEEPH-PYISALESLYPC----ATGDQTYIPNSTVIGRCKEDV 184
I D Y+ C P LG P SA +P + G ++PN IG
Sbjct: 989 IASDFYEGQACRPVILGSSSSEMPCFSAKSLGHPILKSDSLGKGAFVPNDVSIG------ 1042
Query: 185 ESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G+ + +LLTGPNMGGKST++RQ+ L ILAQ+
Sbjct: 1043 -----GSDGASFILLTGPNMGGKSTLLRQVCLAVILAQV 1076
>gi|347534571|ref|YP_004841241.1| DNA mismatch repair protein mutS [Lactobacillus sanfranciscensis
TMW 1.1304]
gi|345504627|gb|AEN99309.1| DNA mismatch repair protein mutS [Lactobacillus sanfranciscensis
TMW 1.1304]
Length = 873
Score = 56.2 bits (134), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 30/70 (42%), Positives = 38/70 (54%), Gaps = 13/70 (18%)
Query: 154 ISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQ 213
I+A + G Q Y+PN ++ + K +LL+TGPNM GKST MRQ
Sbjct: 572 INARHPVVEQVMGSQKYVPNDVLM-------------DAKTKILLITGPNMSGKSTYMRQ 618
Query: 214 LGLITILAQM 223
L LI ILAQM
Sbjct: 619 LALIVILAQM 628
>gi|347842345|emb|CCD56917.1| similar to DNA mismatch repair protein msh3 [Botryotinia
fuckeliana]
Length = 1133
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 46/92 (50%), Gaps = 24/92 (26%)
Query: 138 GVCVPTFLGLEE------PHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGN 191
G C PTF E HP + E L P A YIPN T + + +
Sbjct: 842 GYCKPTFTSSTEISVIGGRHPMV---EQLLPSA-----YIPNDTSLSTSPDHTRA----- 888
Query: 192 RKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
LLLTGPNMGGKS+ +RQ+ LI+ILAQ+
Sbjct: 889 -----LLLTGPNMGGKSSYVRQVALISILAQI 915
>gi|154319616|ref|XP_001559125.1| hypothetical protein BC1G_02289 [Botryotinia fuckeliana B05.10]
Length = 1115
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 46/92 (50%), Gaps = 24/92 (26%)
Query: 138 GVCVPTFLGLEE------PHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGN 191
G C PTF E HP + E L P A YIPN T + + +
Sbjct: 877 GYCKPTFTSSTEISVIGGRHPMV---EQLLPSA-----YIPNDTSLSTSPDHTRA----- 923
Query: 192 RKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
LLLTGPNMGGKS+ +RQ+ LI+ILAQ+
Sbjct: 924 -----LLLTGPNMGGKSSYVRQVALISILAQI 950
>gi|302799426|ref|XP_002981472.1| hypothetical protein SELMODRAFT_114224 [Selaginella moellendorffii]
gi|300151012|gb|EFJ17660.1| hypothetical protein SELMODRAFT_114224 [Selaginella moellendorffii]
Length = 975
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 16/89 (17%)
Query: 140 CVPTFLGLEE-PHPYISALESLYP---CATGDQT-YIPNSTVIGRCKEDVESGGEGNRKP 194
C+PTF+ + P A +P +T T ++PN V+G G P
Sbjct: 678 CLPTFVPASQLAKPVFRAKALRHPIVAVSTAASTPFVPNDVVLG-----------GGSNP 726
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
V+LLTGPNMGGKST++RQ+ L ILAQ+
Sbjct: 727 EVMLLTGPNMGGKSTLLRQVCLGMILAQI 755
>gi|190359866|sp|A6RPB6.2|MSH3_BOTFB RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
Length = 1133
Score = 56.2 bits (134), Expect = 1e-05, Method: Composition-based stats.
Identities = 37/92 (40%), Positives = 46/92 (50%), Gaps = 24/92 (26%)
Query: 138 GVCVPTFLGLEE------PHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGN 191
G C PTF E HP + E L P A YIPN T + + +
Sbjct: 842 GYCKPTFTSSTEISVIGGRHPMV---EQLLPSA-----YIPNDTSLSTSPDHTRA----- 888
Query: 192 RKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
LLLTGPNMGGKS+ +RQ+ LI+ILAQ+
Sbjct: 889 -----LLLTGPNMGGKSSYVRQVALISILAQI 915
>gi|17508447|ref|NP_491163.1| Protein MSH-6 [Caenorhabditis elegans]
gi|373220156|emb|CCD72556.1| Protein MSH-6 [Caenorhabditis elegans]
Length = 1186
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 21/93 (22%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPC--------ATGDQTYIPNSTVIGRCKEDVESGGEG 190
+C+P F PY+ + ++PC T ++I NST +G +
Sbjct: 905 MCMPEF-DFNATDPYLIVDKGVHPCLALQSRNEVTQTTSFIANSTTMGASE--------- 954
Query: 191 NRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
V+LLTGPNMGGKST+MRQ ++ ILA +
Sbjct: 955 ---AAVMLLTGPNMGGKSTLMRQTAVLAILAHI 984
>gi|268552723|ref|XP_002634344.1| C. briggsae CBR-MVB-12 protein [Caenorhabditis briggsae]
Length = 281
Score = 55.8 bits (133), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 56/108 (51%), Gaps = 4/108 (3%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFL-RKTRYLCVSKT---ESLF 70
PITA+ ++ D K P G+ I K D +AD+WR+ F + R+ RY+C S ++
Sbjct: 16 PITAMCIVADKSKAPRGFVPIVKCQDDQGEADLWRDGFFTINRQVRYICTSTEIPDSNIR 75
Query: 71 QIDYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQ 118
++ N+ I+ E + P G+ I T DS + + ++ + +P+
Sbjct: 76 TPVQVITNLIIVRESDPIPHGYVAIDYTADSREKSLRKKYVCIRTEPR 123
>gi|156061525|ref|XP_001596685.1| hypothetical protein SS1G_02907 [Sclerotinia sclerotiorum 1980]
gi|190359849|sp|A7EC69.1|MSH3_SCLS1 RecName: Full=DNA mismatch repair protein msh3; AltName: Full=MutS
protein homolog 3
gi|154700309|gb|EDO00048.1| hypothetical protein SS1G_02907 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1130
Score = 55.8 bits (133), Expect = 1e-05, Method: Composition-based stats.
Identities = 36/92 (39%), Positives = 47/92 (51%), Gaps = 24/92 (26%)
Query: 138 GVCVPTFLGLEE------PHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGN 191
G C PTF E HP + E L P TYIPN T + ++ +
Sbjct: 839 GYCKPTFTSTTEISVVGGRHPMV---EQLLP-----STYIPNDTSLSTDPDNTRA----- 885
Query: 192 RKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
LL+TGPNMGGKS+ +RQ+ LI+ILAQ+
Sbjct: 886 -----LLITGPNMGGKSSYVRQVALISILAQI 912
>gi|337287987|ref|YP_004627459.1| DNA mismatch repair protein mutS [Thermodesulfobacterium sp. OPB45]
gi|334901725|gb|AEH22531.1| DNA mismatch repair protein mutS [Thermodesulfobacterium geofontis
OPF15]
Length = 865
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 33/82 (40%), Positives = 45/82 (54%), Gaps = 19/82 (23%)
Query: 142 PTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTG 201
P F+ E HP + ++ G + ++PNS + KED TVL++TG
Sbjct: 578 PIFIVEEGRHPVLEQIQ-------GKEKFVPNSLEMN--KEDA----------TVLIVTG 618
Query: 202 PNMGGKSTVMRQLGLITILAQM 223
PNMGGKST +RQ LI I+AQM
Sbjct: 619 PNMGGKSTFLRQNALIAIMAQM 640
>gi|225872379|ref|YP_002753834.1| DNA mismatch repair protein MutS [Acidobacterium capsulatum ATCC
51196]
gi|225791956|gb|ACO32046.1| DNA mismatch repair protein MutS [Acidobacterium capsulatum ATCC
51196]
Length = 893
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 8/73 (10%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP I L G ++PN + + E+ E P +LL+TGPNMGGKST
Sbjct: 604 HPVIECLME----RAGTTRFVPNDLYV----DATEATPEAASAPHLLLITGPNMGGKSTY 655
Query: 211 MRQLGLITILAQM 223
+RQ L+ ILAQM
Sbjct: 656 LRQAALLVILAQM 668
>gi|119510583|ref|ZP_01629713.1| DNA mismatch repair protein [Nodularia spumigena CCY9414]
gi|119464744|gb|EAW45651.1| DNA mismatch repair protein [Nodularia spumigena CCY9414]
Length = 863
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 51/95 (53%), Gaps = 15/95 (15%)
Query: 136 QQGVCVPTFLGLEE------PHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGE 189
QQG C P + E HP + E P ++PNST +GR +E G E
Sbjct: 603 QQGYCRPQMVEGREIMIVDGRHPVV---EQSLPAGF----FVPNSTQLGR-EERNHRGAE 654
Query: 190 G-NRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G +P +++LTGPN GKS +RQ+GLI ++AQ+
Sbjct: 655 GAEERPDLVILTGPNASGKSCYLRQVGLIQLMAQI 689
>gi|414084245|ref|YP_006992953.1| DNA mismatch repair protein MutS [Carnobacterium maltaromaticum
LMA28]
gi|412997829|emb|CCO11638.1| DNA mismatch repair protein MutS [Carnobacterium maltaromaticum
LMA28]
Length = 873
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 39/73 (53%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCAT---GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
I+ LE +P G QTY+PNS E + +LL+TGPNM GKST
Sbjct: 573 INLLEGRHPVVEKVLGQQTYVPNSV-------------EMTTETDILLITGPNMSGKSTY 619
Query: 211 MRQLGLITILAQM 223
MRQL L I+AQM
Sbjct: 620 MRQLALTVIMAQM 632
>gi|392531926|ref|ZP_10279063.1| DNA mismatch repair protein MutS [Carnobacterium maltaromaticum
ATCC 35586]
Length = 873
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 39/73 (53%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCAT---GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
I+ LE +P G QTY+PNS E + +LL+TGPNM GKST
Sbjct: 573 INLLEGRHPVVEKVLGQQTYVPNSV-------------EMTTETDILLITGPNMSGKSTY 619
Query: 211 MRQLGLITILAQM 223
MRQL L I+AQM
Sbjct: 620 MRQLALTVIMAQM 632
>gi|302773165|ref|XP_002970000.1| hypothetical protein SELMODRAFT_410679 [Selaginella moellendorffii]
gi|300162511|gb|EFJ29124.1| hypothetical protein SELMODRAFT_410679 [Selaginella moellendorffii]
Length = 1232
Score = 55.5 bits (132), Expect = 2e-05, Method: Composition-based stats.
Identities = 35/89 (39%), Positives = 48/89 (53%), Gaps = 16/89 (17%)
Query: 140 CVPTFLGLEE-PHPYISALESLYP---CATGDQT-YIPNSTVIGRCKEDVESGGEGNRKP 194
C+PTF+ + P A +P +T T ++PN V+G G P
Sbjct: 912 CLPTFVPASQLAKPVFRAKALRHPIVAVSTAASTPFVPNDVVLG-----------GGSNP 960
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
V+LLTGPNMGGKST++RQ+ L ILAQ+
Sbjct: 961 EVMLLTGPNMGGKSTLLRQVCLGMILAQI 989
>gi|339448738|ref|ZP_08652294.1| DNA mismatch repair protein MutS [Lactobacillus fructivorans KCTC
3543]
Length = 885
Score = 55.5 bits (132), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 47/153 (30%), Positives = 67/153 (43%), Gaps = 31/153 (20%)
Query: 77 ENICIINEKETPPDGFCLIARTLDSDQGQICE----RGGVVDYKPQQSNNTIFSQRNILK 132
E+I + E+++ + + R D + QI G+ QS TI + +K
Sbjct: 503 ESIILEAEEKSKSLEYEIFTRVRDQIKKQIPRIQKLASGISRLDVLQSFATISEKYQFIK 562
Query: 133 DMYQQGVCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNR 192
+ G + G HP + + G Q+Y+PN V+
Sbjct: 563 PQFNDGHDLNVKAG---RHPVVERV-------MGAQSYVPNDVVM--------------- 597
Query: 193 KPTV--LLLTGPNMGGKSTVMRQLGLITILAQM 223
P+V LL+TGPNM GKST MRQL LI ILAQM
Sbjct: 598 HPSVSELLITGPNMSGKSTYMRQLALIVILAQM 630
>gi|328493202|gb|AEB20401.1| msh6 [Schmidtea mediterranea]
Length = 1174
Score = 55.1 bits (131), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 42/74 (56%), Gaps = 6/74 (8%)
Query: 152 PYISALESLYPCATGDQT--YIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
P++ E +PC Q+ +I N+ +G + N V+LLTGPNMGGKST
Sbjct: 915 PFLIITEGRFPCKAKTQSGEFISNTIKLG----SLLMNSNRNLDNPVMLLTGPNMGGKST 970
Query: 210 VMRQLGLITILAQM 223
+MRQ LI IL+Q+
Sbjct: 971 LMRQTALIIILSQL 984
>gi|255084495|ref|XP_002508822.1| predicted protein [Micromonas sp. RCC299]
gi|226524099|gb|ACO70080.1| predicted protein [Micromonas sp. RCC299]
Length = 1419
Score = 55.1 bits (131), Expect = 2e-05, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 48/88 (54%), Gaps = 15/88 (17%)
Query: 140 CVPTFLGLEEP-HPYISALESLYPCA---TGDQTYIPNSTVIGRCKEDVESGGEGNRKPT 195
C P+ + E P + A+ +PCA ++++PN T +G GG+
Sbjct: 1124 CTPSVIAPEPSGTPSLDAVRLRHPCAPALAAGESFVPNDTKLG-------GGGDA----P 1172
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
LLLTGPNMGGKST++RQ+ L I+A +
Sbjct: 1173 FLLLTGPNMGGKSTLIRQVCLAAIMAHV 1200
>gi|149246718|ref|XP_001527784.1| hypothetical protein LELG_00304 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146447738|gb|EDK42126.1| hypothetical protein LELG_00304 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1320
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 13/84 (15%)
Query: 140 CVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLL 199
C P F+ E H I E +PC G + +IPN +G G+ +P+ LL
Sbjct: 996 CRPEFV--ETQHGMIDFKELRHPCFVGTKDFIPNDIKLG-----------GDDEPSFGLL 1042
Query: 200 TGPNMGGKSTVMRQLGLITILAQM 223
TG N GKST+MR L IL+Q+
Sbjct: 1043 TGANAAGKSTIMRTTALAVILSQI 1066
>gi|427737849|ref|YP_007057393.1| DNA mismatch repair protein MutS [Rivularia sp. PCC 7116]
gi|427372890|gb|AFY56846.1| DNA mismatch repair protein MutS [Rivularia sp. PCC 7116]
Length = 853
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 52/92 (56%), Gaps = 16/92 (17%)
Query: 137 QGVCVPTFLGLEEPHPYISALESLYPCATGDQT-----YIPNSTVIGRCKEDVESGGEGN 191
QG C P + E I+ ++ +P +Q+ ++PNST +GR E G+ N
Sbjct: 599 QGYCRPEIVEGRE----ITIIDGRHPVV--EQSLPAGFFVPNSTYLGR-----EENGDTN 647
Query: 192 RKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
P +++LTGPN GKS +RQ+GLI ++AQ+
Sbjct: 648 NSPDLIILTGPNASGKSCYLRQVGLIQLMAQV 679
>gi|398310794|ref|ZP_10514268.1| DNA mismatch repair protein MutS [Bacillus mojavensis RO-H-1]
Length = 858
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 43/73 (58%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCA---TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
+ +E +P Q Y+PN+ V+G GNR+ +LL+TGPNM GKST
Sbjct: 565 VEVIEGRHPVVEKVMDSQEYVPNNCVMG-----------GNRQ--MLLITGPNMSGKSTY 611
Query: 211 MRQLGLITILAQM 223
MRQ+ LI+I+AQ+
Sbjct: 612 MRQIALISIMAQI 624
>gi|422881011|ref|ZP_16927467.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK355]
gi|332365453|gb|EGJ43214.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK355]
Length = 849
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS ++ ++K + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQSYIPNSILL-------------DQKTDIQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|118368049|ref|XP_001017234.1| MutS domain III family protein [Tetrahymena thermophila]
gi|89299001|gb|EAR96989.1| MutS domain III family protein [Tetrahymena thermophila SB210]
gi|311992449|gb|ADQ26782.1| putative mismatch repair protein [Tetrahymena thermophila]
Length = 1232
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 5/73 (6%)
Query: 152 PYISALESLYPC-ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
P+I +PC A+ +IPN +G D++ G+ ++LLTGPNMGGKST
Sbjct: 957 PFIELTSGRHPCLASMGVNFIPNDIYLG----DIKQTGQFEDNKNLILLTGPNMGGKSTT 1012
Query: 211 MRQLGLITILAQM 223
+R ++ ILAQ+
Sbjct: 1013 LRMACVMAILAQI 1025
>gi|422825315|ref|ZP_16873494.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK678]
gi|324995817|gb|EGC27728.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK678]
Length = 849
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS ++ ++K + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQSYIPNSILL-------------DQKTDIQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|391335569|ref|XP_003742162.1| PREDICTED: DNA mismatch repair protein Msh6-like [Metaseiulus
occidentalis]
Length = 1146
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 46/88 (52%), Gaps = 10/88 (11%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPC---ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPT 195
VC P + E I + +PC G+ I N +G +E G +
Sbjct: 893 VCRPK-INHESQKAIIRIVNGCHPCLLKKLGEDKLIANDFTLGTVEEGRCDGS------S 945
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
V LLTGPNMGGKST+MRQ+GL+ ++AQ+
Sbjct: 946 VALLTGPNMGGKSTLMRQVGLLVVMAQL 973
>gi|422824605|ref|ZP_16872792.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK405]
gi|422856698|ref|ZP_16903354.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1]
gi|422863626|ref|ZP_16910257.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK408]
gi|422866538|ref|ZP_16913163.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1058]
gi|324992654|gb|EGC24575.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK405]
gi|327460057|gb|EGF06396.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1]
gi|327472203|gb|EGF17640.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK408]
gi|327488647|gb|EGF20447.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1058]
Length = 849
Score = 54.7 bits (130), Expect = 3e-05, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS ++ ++K + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQSYIPNSILL-------------DQKTDIQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|357153628|ref|XP_003576514.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Brachypodium
distachyon]
Length = 1318
Score = 54.7 bits (130), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 48/83 (57%), Gaps = 17/83 (20%)
Query: 141 VPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLT 200
PTF HP I + +SL G +++PN D++ GG GN + ++LT
Sbjct: 1025 TPTFYARNLGHPIIRS-DSL-----GKGSFVPN---------DIKMGGPGN--ASFIVLT 1067
Query: 201 GPNMGGKSTVMRQLGLITILAQM 223
GPNMGGKST++RQ+ L ILAQ+
Sbjct: 1068 GPNMGGKSTLLRQVCLTIILAQI 1090
>gi|428298685|ref|YP_007136991.1| DNA mismatch repair protein MutS [Calothrix sp. PCC 6303]
gi|428235229|gb|AFZ01019.1| DNA mismatch repair protein MutS [Calothrix sp. PCC 6303]
Length = 862
Score = 54.3 bits (129), Expect = 3e-05, Method: Composition-based stats.
Identities = 33/93 (35%), Positives = 46/93 (49%), Gaps = 13/93 (13%)
Query: 137 QGVCVPTFLGLEE------PHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEG 190
QG C P + E HP + E P ++PN+ +G E+ SG
Sbjct: 603 QGYCRPQMVEGREIYVVDGRHPVV---EQSLPAGF----FVPNTCRLGADTENNNSGNSH 655
Query: 191 NRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
N P +++LTGPN GKS +RQ GLI I+AQ+
Sbjct: 656 NPSPDLVILTGPNASGKSCYLRQTGLIQIMAQI 688
>gi|70953875|ref|XP_746012.1| DNA repair protein [Plasmodium chabaudi chabaudi]
gi|56526506|emb|CAH77895.1| DNA repair protein, putative [Plasmodium chabaudi chabaudi]
Length = 1136
Score = 54.3 bits (129), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 11/77 (14%)
Query: 148 EEPHPYISALESLYPC-ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGG 206
+E P++ +++P AT +IPN+ +G KE K T LLLTGPNMGG
Sbjct: 867 KEKKPFLILENNIHPVVATLMPNFIPNNIYMGCDKE----------KETTLLLTGPNMGG 916
Query: 207 KSTVMRQLGLITILAQM 223
KST++RQ + ILAQ+
Sbjct: 917 KSTLLRQTAISVILAQI 933
>gi|270014976|gb|EFA11424.1| hypothetical protein TcasGA2_TC013601 [Tribolium castaneum]
Length = 1085
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 11/63 (17%)
Query: 161 YPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITIL 220
+PC T ++PN T +G +LL+TGPNMGGKST+MRQ+ +I I+
Sbjct: 838 HPCITNIDNFVPNDTKMGVADF-----------ANILLITGPNMGGKSTLMRQIAIICIM 886
Query: 221 AQM 223
A M
Sbjct: 887 AHM 889
>gi|221635855|ref|YP_002523731.1| DNA mismatch repair protein MutS [Thermomicrobium roseum DSM 5159]
gi|221157957|gb|ACM07075.1| DNA mismatch repair protein MutS [Thermomicrobium roseum DSM 5159]
Length = 881
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 12/56 (21%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q ++PN D + GG+G P +LL+TGPNMGGKST +RQ+ LI +LAQ+
Sbjct: 606 QPFVPN---------DCQLGGDG---PRLLLVTGPNMGGKSTYLRQVALIVLLAQI 649
>gi|91082687|ref|XP_971522.1| PREDICTED: similar to DNA mismatch repair protein muts [Tribolium
castaneum]
Length = 1079
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 26/63 (41%), Positives = 36/63 (57%), Gaps = 11/63 (17%)
Query: 161 YPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITIL 220
+PC T ++PN T +G +LL+TGPNMGGKST+MRQ+ +I I+
Sbjct: 832 HPCITNIDNFVPNDTKMGVADF-----------ANILLITGPNMGGKSTLMRQIAIICIM 880
Query: 221 AQM 223
A M
Sbjct: 881 AHM 883
>gi|68072659|ref|XP_678243.1| DNA repair protein [Plasmodium berghei strain ANKA]
gi|56498644|emb|CAH98713.1| DNA repair protein, putative [Plasmodium berghei]
Length = 1090
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 11/77 (14%)
Query: 148 EEPHPYISALESLYPC-ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGG 206
+E P++ +++P AT +IPN+ +G KE K T LLLTGPNMGG
Sbjct: 821 KEKKPFLILENNIHPVVATLMPNFIPNNIYMGCDKE----------KETTLLLTGPNMGG 870
Query: 207 KSTVMRQLGLITILAQM 223
KST++RQ + ILAQ+
Sbjct: 871 KSTLLRQTAISVILAQI 887
>gi|448082468|ref|XP_004195147.1| Piso0_005692 [Millerozyma farinosa CBS 7064]
gi|359376569|emb|CCE87151.1| Piso0_005692 [Millerozyma farinosa CBS 7064]
Length = 1245
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 41/84 (48%), Gaps = 14/84 (16%)
Query: 140 CVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLL 199
C P F+ E + E +PC TG + +IPN V+G KP + LL
Sbjct: 950 CRPAFI--ESNKGQVEFKELRHPCFTGTKDFIPNDVVLG------------GSKPNMGLL 995
Query: 200 TGPNMGGKSTVMRQLGLITILAQM 223
TG N GKST+MR L IL+Q+
Sbjct: 996 TGANAAGKSTIMRTTALAIILSQI 1019
>gi|377809458|ref|YP_005004679.1| DNA mismatch repair protein MutS [Pediococcus claussenii ATCC
BAA-344]
gi|361056199|gb|AEV95003.1| DNA mismatch repair protein MutS [Pediococcus claussenii ATCC
BAA-344]
Length = 870
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+Y+PN +G+ E +LL+TGPNM GKST MRQL L I+AQM
Sbjct: 587 GHQSYVPNDINMGKDTE-------------ILLITGPNMSGKSTYMRQLALTVIMAQM 631
>gi|412993266|emb|CCO16799.1| predicted protein [Bathycoccus prasinos]
Length = 1318
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 33/88 (37%), Positives = 47/88 (53%), Gaps = 6/88 (6%)
Query: 140 CVPTFLGLEEPH--PYISALESLYPCATGDQTYI--PNSTVIGRCKEDVESGGEGNRKPT 195
CVP FL L + P +S +P Q I ++ G C ++ GG+ P
Sbjct: 1001 CVPRFLSLNKSDGTPIVSLTNFWHPLLDASQRNIVKNDAQFGGSCCDN--DGGQPRECPR 1058
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
+LL+GPNMGGKST+ R +GL +LAQ+
Sbjct: 1059 FVLLSGPNMGGKSTLARAVGLTIVLAQV 1086
>gi|375106982|ref|ZP_09753243.1| DNA mismatch repair protein MutS [Burkholderiales bacterium
JOSHI_001]
gi|374667713|gb|EHR72498.1| DNA mismatch repair protein MutS [Burkholderiales bacterium
JOSHI_001]
Length = 870
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 23/92 (25%)
Query: 138 GVCVPTFLGLEEPHPYISALESLYPCA------TGDQTYIPNSTVIGRCKEDVESGGEGN 191
G C P F+ HP I L +P TG +IPN C+ D +
Sbjct: 574 GWCRPQFVS----HPCIDILAGRHPVVQARLAETGAGDFIPND-----CRLDART----- 619
Query: 192 RKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L++TGPNMGGKST MRQ+ L+ +LA M
Sbjct: 620 ---RMLVITGPNMGGKSTFMRQVALVCLLAAM 648
>gi|320163391|gb|EFW40290.1| mismatch repair protein Msh6 [Capsaspora owczarzaki ATCC 30864]
Length = 1363
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 34/88 (38%), Positives = 47/88 (53%), Gaps = 14/88 (15%)
Query: 139 VCVPTFL--GLEEPHPYISALESLYPC-ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPT 195
VC PT + G ++ P + + +P A +YI N T +G G P
Sbjct: 1087 VCRPTLVERGDDDSEPVLELEDLRHPLLAYLGSSYIANDTALG-----------GKAHPR 1135
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
+LLLTGPNMGGKST++RQ L I+AQ+
Sbjct: 1136 ILLLTGPNMGGKSTLLRQTCLSVIMAQL 1163
>gi|440794306|gb|ELR15471.1| MutS domain V domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 1150
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/88 (36%), Positives = 50/88 (56%), Gaps = 18/88 (20%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCAT---GDQTYIPNSTVIGRCKEDVESGGEGNRKPT 195
VC PTF+ E + A E +PC + GD+ +IPN+ +G +
Sbjct: 828 VCRPTFV--EAKEAFFEAEEMRHPCISPKIGDE-FIPNTLRVGHPHQ------------P 872
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
++LLTGPNMGGKST++R+ ++ I+AQ+
Sbjct: 873 LILLTGPNMGGKSTLLRETCVLAIIAQV 900
>gi|338176045|ref|YP_004652855.1| DNA mismatch repair protein MutS [Parachlamydia acanthamoebae UV-7]
gi|336480403|emb|CCB87001.1| DNA mismatch repair protein mutS [Parachlamydia acanthamoebae UV-7]
Length = 849
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 41/73 (56%), Gaps = 19/73 (26%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP I A A + +IPN T++ G NR +LL+TGPNM GKST
Sbjct: 599 HPVIEA-------AHAGEKFIPNDTLLD---------GSDNR---LLLITGPNMAGKSTY 639
Query: 211 MRQLGLITILAQM 223
+RQ+ LITI+AQM
Sbjct: 640 IRQVALITIMAQM 652
>gi|227544212|ref|ZP_03974261.1| DNA mismatch repair protein MutS [Lactobacillus reuteri CF48-3A]
gi|338204107|ref|YP_004650252.1| DNA mismatch repair protein HexA [Lactobacillus reuteri SD2112]
gi|227185805|gb|EEI65876.1| DNA mismatch repair protein MutS [Lactobacillus reuteri CF48-3A]
gi|336449347|gb|AEI57962.1| DNA mismatch repair protein HexA [Lactobacillus reuteri SD2112]
Length = 881
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 37/58 (63%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN+ ++G ED + +LL+TGPNM GKST MRQL LI ++AQ+
Sbjct: 583 GHQEYVPNNVLMG---EDTD----------ILLITGPNMSGKSTYMRQLALIAVMAQI 627
>gi|282889672|ref|ZP_06298211.1| hypothetical protein pah_c004o009 [Parachlamydia acanthamoebae str.
Hall's coccus]
gi|281500246|gb|EFB42526.1| hypothetical protein pah_c004o009 [Parachlamydia acanthamoebae str.
Hall's coccus]
Length = 849
Score = 54.3 bits (129), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 32/73 (43%), Positives = 41/73 (56%), Gaps = 19/73 (26%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP I A A + +IPN T++ G NR +LL+TGPNM GKST
Sbjct: 599 HPVIEA-------AHAGEKFIPNDTLLD---------GSDNR---LLLITGPNMAGKSTY 639
Query: 211 MRQLGLITILAQM 223
+RQ+ LITI+AQM
Sbjct: 640 IRQVALITIMAQM 652
>gi|320587388|gb|EFW99868.1| DNA mismatch repair protein msh3 [Grosmannia clavigera kw1407]
Length = 1180
Score = 54.3 bits (129), Expect = 4e-05, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 37/54 (68%), Gaps = 1/54 (1%)
Query: 170 YIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
YIP ST +G ED + + KP +L+TGPNMGGKS+ +R + L+T+LAQ+
Sbjct: 882 YIPFSTEMGGKDEDEDENATAS-KPPAILITGPNMGGKSSFVRAVALLTLLAQI 934
>gi|374312317|ref|YP_005058747.1| DNA mismatch repair protein MutS [Granulicella mallensis MP5ACTX8]
gi|358754327|gb|AEU37717.1| DNA mismatch repair protein MutS [Granulicella mallensis MP5ACTX8]
Length = 915
Score = 53.9 bits (128), Expect = 4e-05, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 38/58 (65%), Gaps = 7/58 (12%)
Query: 165 TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
+G +IPNS + +GGE N P++LL+TGPNMGGKST +RQ L+ I+AQ
Sbjct: 639 SGGGRFIPNSLHLE------AAGGEAN-GPSLLLITGPNMGGKSTYLRQAALLVIMAQ 689
>gi|210147563|ref|NP_001129949.1| family with sequence similarity 125, member B [Danio rerio]
Length = 273
Score = 53.9 bits (128), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 31/110 (28%), Positives = 64/110 (58%), Gaps = 3/110 (2%)
Query: 16 ITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSK--TESLFQID 73
++ I V+ ++ P+ Y ++++T D DA++W++S F + TRYLC S+ T Q+
Sbjct: 19 VSDIGVLASKRQPPADYYIVAQTTD-GFDANLWKDSIFKSKVTRYLCFSRAATSKNKQLC 77
Query: 74 YIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSNNT 123
+V ++ +++ K+ P+GF I T+D+ + + + V + P+ S +T
Sbjct: 78 NVVVDMKLMDLKDCLPEGFTPIQDTMDTQEQALRKERLCVKFVPRNSTDT 127
>gi|443326192|ref|ZP_21054854.1| DNA mismatch repair protein MutS [Xenococcus sp. PCC 7305]
gi|442794188|gb|ELS03613.1| DNA mismatch repair protein MutS [Xenococcus sp. PCC 7305]
Length = 893
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 33/92 (35%), Positives = 50/92 (54%), Gaps = 9/92 (9%)
Query: 137 QGVCVPTFLGLEEPHPYISALESLYPC---ATGDQTYIPNSTVIGRCKEDV--ESGGEGN 191
Q C P + E I LE +P + GD ++PNST +G D+ +G +
Sbjct: 605 QNYCRPQMVTGRE----IFILEGRHPVVEQSLGDGFFVPNSTDMGNYSADIPLNNGDKSE 660
Query: 192 RKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
P +++LTGPN GKS +RQ+GLI ++AQ+
Sbjct: 661 ISPDLVILTGPNASGKSCYLRQVGLIQLMAQI 692
>gi|325188354|emb|CCA22891.1| PREDICTED: similar to G/T mismatch binding protein p [Albugo
laibachii Nc14]
Length = 1191
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/72 (37%), Positives = 43/72 (59%), Gaps = 11/72 (15%)
Query: 152 PYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVM 211
P+I ++ G++ +IPN T +G G G +++LL+GPNMGGKST++
Sbjct: 916 PFIDFKGGVHATMAGNEHFIPNDTTLGL-------DGRG----SLMLLSGPNMGGKSTLL 964
Query: 212 RQLGLITILAQM 223
RQ LI ++AQ+
Sbjct: 965 RQTCLIALMAQI 976
>gi|163119447|ref|YP_079101.2| DNA mismatch repair protein MutS [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|404489197|ref|YP_006713303.1| DNA mismatch repair protein MutS [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|81691063|sp|Q65JE2.1|MUTS_BACLD RecName: Full=DNA mismatch repair protein MutS
gi|52348188|gb|AAU40822.1| DNA mismatch repair protein MutS [Bacillus licheniformis DSM 13 =
ATCC 14580]
gi|145902954|gb|AAU23463.2| MutS [Bacillus licheniformis DSM 13 = ATCC 14580]
Length = 869
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q+Y+PNS +G+ ++ +LL+TGPNM GKST MRQ+ LI+ILAQ+
Sbjct: 582 QSYVPNSCEMGKGRQ-------------MLLITGPNMSGKSTYMRQMALISILAQI 624
>gi|423682250|ref|ZP_17657089.1| DNA mismatch repair protein MutS [Bacillus licheniformis WX-02]
gi|383439024|gb|EID46799.1| DNA mismatch repair protein MutS [Bacillus licheniformis WX-02]
Length = 869
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q+Y+PNS +G+ ++ +LL+TGPNM GKST MRQ+ LI+ILAQ+
Sbjct: 582 QSYVPNSCEMGKGRQ-------------MLLITGPNMSGKSTYMRQMALISILAQI 624
>gi|319645909|ref|ZP_08000139.1| DNA mismatch repair protein mutS [Bacillus sp. BT1B_CT2]
gi|317391659|gb|EFV72456.1| DNA mismatch repair protein mutS [Bacillus sp. BT1B_CT2]
Length = 863
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q+Y+PNS +G+ ++ +LL+TGPNM GKST MRQ+ LI+ILAQ+
Sbjct: 576 QSYVPNSCEMGKGRQ-------------MLLITGPNMSGKSTYMRQMALISILAQI 618
>gi|89100701|ref|ZP_01173557.1| DNA mismatch repair protein [Bacillus sp. NRRL B-14911]
gi|89084576|gb|EAR63721.1| DNA mismatch repair protein [Bacillus sp. NRRL B-14911]
Length = 883
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 59/123 (47%), Gaps = 25/123 (20%)
Query: 109 RGGVVDYKPQ-QSNNTIFSQRNILKDMYQ----QGVCVPTFLGLEEPHPYISALESLYPC 163
R V +Y P+ QS S+ ++L+ Q + P F G E IS E +P
Sbjct: 523 RDHVKEYIPRLQSLARTVSELDVLQCFAQISEDRHYVRPVFSGNRE----ISVKEGRHPV 578
Query: 164 A---TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITIL 220
Q Y+PN V+G +E +LL+TGPNM GKST MRQ+ L +IL
Sbjct: 579 VEKVMDSQEYVPNDCVMGDGRE-------------LLLITGPNMSGKSTYMRQVALTSIL 625
Query: 221 AQM 223
AQ+
Sbjct: 626 AQI 628
>gi|423335913|ref|ZP_17313664.1| DNA mismatch repair protein MutS [Lactobacillus reuteri ATCC 53608]
gi|337729116|emb|CCC04239.1| DNA mismatch repair protein MutS [Lactobacillus reuteri ATCC 53608]
Length = 881
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN ++G ED + +LL+TGPNM GKST MRQL LI ++AQ+
Sbjct: 583 GHQEYVPNDVLMG---EDTD----------ILLITGPNMSGKSTYMRQLALIAVMAQI 627
>gi|194468323|ref|ZP_03074309.1| DNA mismatch repair protein MutS [Lactobacillus reuteri 100-23]
gi|194453176|gb|EDX42074.1| DNA mismatch repair protein MutS [Lactobacillus reuteri 100-23]
Length = 881
Score = 53.9 bits (128), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN ++G ED + +LL+TGPNM GKST MRQL LI ++AQ+
Sbjct: 583 GHQEYVPNDVLMG---EDTD----------ILLITGPNMSGKSTYMRQLALIAVMAQI 627
>gi|148543760|ref|YP_001271130.1| DNA mismatch repair protein MutS [Lactobacillus reuteri DSM 20016]
gi|184153166|ref|YP_001841507.1| DNA mismatch repair protein MutS [Lactobacillus reuteri JCM 1112]
gi|227363260|ref|ZP_03847392.1| DNA mismatch repair protein MutS [Lactobacillus reuteri MM2-3]
gi|325682132|ref|ZP_08161650.1| DNA mismatch repair protein HexA [Lactobacillus reuteri MM4-1A]
gi|189083181|sp|A5VIW9.1|MUTS_LACRD RecName: Full=DNA mismatch repair protein MutS
gi|229620050|sp|B2G6E5.1|MUTS_LACRJ RecName: Full=DNA mismatch repair protein MutS
gi|148530794|gb|ABQ82793.1| DNA mismatch repair protein MutS [Lactobacillus reuteri DSM 20016]
gi|183224510|dbj|BAG25027.1| DNA mismatch repair protein MutS [Lactobacillus reuteri JCM 1112]
gi|227071716|gb|EEI10007.1| DNA mismatch repair protein MutS [Lactobacillus reuteri MM2-3]
gi|324978776|gb|EGC15725.1| DNA mismatch repair protein HexA [Lactobacillus reuteri MM4-1A]
Length = 881
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN ++G ED + +LL+TGPNM GKST MRQL LI ++AQ+
Sbjct: 583 GHQEYVPNDVLMG---EDTD----------ILLITGPNMSGKSTYMRQLALIAVMAQI 627
>gi|7012942|gb|AAF35250.1|AF227632_1 mismatch binding protein Mus3 [Zea mays]
Length = 629
Score = 53.9 bits (128), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 48/82 (58%), Gaps = 17/82 (20%)
Query: 142 PTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTG 201
PTF HP + + +SL G +++PN DV+ GG GN + ++LTG
Sbjct: 342 PTFHARNLGHPILRS-DSL-----GKGSFVPN---------DVKIGGPGN--ASFIVLTG 384
Query: 202 PNMGGKSTVMRQLGLITILAQM 223
PNMGGKST++RQ+ L ILAQ+
Sbjct: 385 PNMGGKSTLLRQVCLTIILAQI 406
>gi|270290979|ref|ZP_06197202.1| DNA mismatch repair protein MutS [Pediococcus acidilactici 7_4]
gi|270280375|gb|EFA26210.1| DNA mismatch repair protein MutS [Pediococcus acidilactici 7_4]
Length = 840
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+Y+PN ++ N+ +LL+TGPNM GKST MRQL L I+AQM
Sbjct: 565 GHQSYVPNDILM-------------NQDTEILLITGPNMSGKSTYMRQLALTVIMAQM 609
>gi|427439507|ref|ZP_18924162.1| DNA mismatch repair protein MutS [Pediococcus lolii NGRI 0510Q]
gi|425788343|dbj|GAC44950.1| DNA mismatch repair protein MutS [Pediococcus lolii NGRI 0510Q]
Length = 894
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+Y+PN ++ N+ +LL+TGPNM GKST MRQL L I+AQM
Sbjct: 587 GHQSYVPNDILM-------------NQDTEILLITGPNMSGKSTYMRQLALTVIMAQM 631
>gi|257870587|ref|ZP_05650240.1| DNA mismatch repair protein mutS [Enterococcus gallinarum EG2]
gi|257804751|gb|EEV33573.1| DNA mismatch repair protein mutS [Enterococcus gallinarum EG2]
Length = 850
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS V+ ED + +LL+TGPNM GKST MRQL L+ I+AQ+
Sbjct: 587 GHQEYIPNSIVM---HEDTD----------ILLITGPNMSGKSTYMRQLALLVIMAQI 631
>gi|375088944|ref|ZP_09735281.1| DNA mismatch repair protein MutS [Dolosigranulum pigrum ATCC 51524]
gi|374561111|gb|EHR32460.1| DNA mismatch repair protein MutS [Dolosigranulum pigrum ATCC 51524]
Length = 868
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 28/57 (49%), Positives = 35/57 (61%), Gaps = 13/57 (22%)
Query: 167 DQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
DQ+Y+PN D+E E + +LL+TGPNM GKST MRQL LI I+ QM
Sbjct: 590 DQSYVPN---------DIEMTNETD----ILLITGPNMSGKSTYMRQLALIVIMGQM 633
>gi|418069533|ref|ZP_12706810.1| DNA mismatch repair protein MutS [Pediococcus acidilactici MA18/5M]
gi|357536064|gb|EHJ20095.1| DNA mismatch repair protein MutS [Pediococcus acidilactici MA18/5M]
Length = 894
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+Y+PN ++ N+ +LL+TGPNM GKST MRQL L I+AQM
Sbjct: 587 GHQSYVPNDILM-------------NQDTEILLITGPNMSGKSTYMRQLALTVIMAQM 631
>gi|357049102|ref|ZP_09110331.1| DNA mismatch repair protein mutS [Enterococcus saccharolyticus
30_1]
gi|355384402|gb|EHG31470.1| DNA mismatch repair protein mutS [Enterococcus saccharolyticus
30_1]
Length = 848
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS V+ ED + +LL+TGPNM GKST MRQL L+ I+AQ+
Sbjct: 585 GHQEYIPNSIVM---HEDTD----------ILLITGPNMSGKSTYMRQLALLVIMAQI 629
>gi|422853249|ref|ZP_16899913.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK160]
gi|325697261|gb|EGD39147.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK160]
Length = 849
Score = 53.5 bits (127), Expect = 6e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS ++ +++ + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQSYIPNSILL-------------DQETNIQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|304385250|ref|ZP_07367595.1| DNA mismatch repair protein MutS [Pediococcus acidilactici DSM
20284]
gi|304328457|gb|EFL95678.1| DNA mismatch repair protein MutS [Pediococcus acidilactici DSM
20284]
Length = 894
Score = 53.5 bits (127), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+Y+PN ++ N+ +LL+TGPNM GKST MRQL L I+AQM
Sbjct: 587 GHQSYVPNDILM-------------NQDTEILLITGPNMSGKSTYMRQLALTVIMAQM 631
>gi|422872497|ref|ZP_16918990.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1087]
gi|328944747|gb|EGG38908.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1087]
Length = 849
Score = 53.5 bits (127), Expect = 7e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS ++ +++ + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQSYIPNSILL-------------DQETNIQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|340502546|gb|EGR29225.1| hypothetical protein IMG5_160240 [Ichthyophthirius multifiliis]
Length = 1077
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 5/73 (6%)
Query: 152 PYISALESLYPCATG-DQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
P+I ++ +PC + +I N IG D+ GE + ++LLTGPNMGGKST
Sbjct: 855 PFIKLKQARHPCLSSLGIKFISNDVFIG----DINQTGEPKDQKNLILLTGPNMGGKSTT 910
Query: 211 MRQLGLITILAQM 223
+R + TIL Q+
Sbjct: 911 LRMTCIATILGQI 923
>gi|402222110|gb|EJU02177.1| hypothetical protein DACRYDRAFT_21918 [Dacryopinax sp. DJM-731 SS1]
Length = 975
Score = 53.5 bits (127), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/84 (36%), Positives = 46/84 (54%), Gaps = 14/84 (16%)
Query: 140 CVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLL 199
C P F+ E + ++ + +P D+ +IPN DV+ GG+ K ++LL
Sbjct: 687 CRPQFV--ESDNAFLDFQQLRHPAFLTDRPFIPN---------DVKLGGD---KEKIMLL 732
Query: 200 TGPNMGGKSTVMRQLGLITILAQM 223
TGPNMGGKST+MR I+AQ+
Sbjct: 733 TGPNMGGKSTLMRMTAAGVIMAQL 756
>gi|452974389|gb|EME74209.1| DNA mismatch repair protein MutS [Bacillus sonorensis L12]
Length = 868
Score = 53.5 bits (127), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q+Y+PNS +G+ ++ +LL+TGPNM GKST MRQ+ LI+ILAQ+
Sbjct: 582 QSYVPNSCQMGQGRQ-------------MLLITGPNMSGKSTYMRQMALISILAQI 624
>gi|295397556|ref|ZP_06807636.1| DNA mismatch repair protein MutS [Aerococcus viridans ATCC 11563]
gi|294974196|gb|EFG49943.1| DNA mismatch repair protein MutS [Aerococcus viridans ATCC 11563]
Length = 868
Score = 53.5 bits (127), Expect = 7e-05, Method: Composition-based stats.
Identities = 31/76 (40%), Positives = 41/76 (53%), Gaps = 20/76 (26%)
Query: 148 EEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGK 207
E HP + + G ++PN V+ D E+ ++L++TGPNM GK
Sbjct: 585 ESRHPVVEGV-------IGQNRFVPNDIVM-----DPET--------SILMITGPNMSGK 624
Query: 208 STVMRQLGLITILAQM 223
ST MRQLGLI ILAQM
Sbjct: 625 STYMRQLGLIVILAQM 640
>gi|392412916|ref|YP_006449523.1| DNA mismatch repair protein MutS [Desulfomonile tiedjei DSM 6799]
gi|390626052|gb|AFM27259.1| DNA mismatch repair protein MutS [Desulfomonile tiedjei DSM 6799]
Length = 870
Score = 53.1 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 27/77 (35%), Positives = 39/77 (50%), Gaps = 19/77 (24%)
Query: 147 LEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGG 206
L+ HP + +S +TY+PN ++ R + + L++TGPNM G
Sbjct: 583 LDGRHPVVETFDS-------RETYVPNDVILNRTSDQI------------LIITGPNMAG 623
Query: 207 KSTVMRQLGLITILAQM 223
KST MRQ LI I+ QM
Sbjct: 624 KSTYMRQTALIVIMGQM 640
>gi|66827461|ref|XP_647085.1| hypothetical protein DDB_G0268614 [Dictyostelium discoideum AX4]
gi|74897500|sp|Q55GU9.1|MSH6_DICDI RecName: Full=DNA mismatch repair protein Msh6
gi|60475825|gb|EAL73760.1| hypothetical protein DDB_G0268614 [Dictyostelium discoideum AX4]
Length = 1260
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 59/110 (53%), Gaps = 21/110 (19%)
Query: 123 TIFSQRNILKDMYQQG------VCVPTFLGLEEPHPYISALESLYPC---ATGDQTYIPN 173
T SQ + L +Y+ +C P F+ ++ +I + +PC +GD +IPN
Sbjct: 952 TKLSQLDCLLSLYKVSFQSSIQMCRPLFVSSDQ-RGFIDVKDMRHPCIYSKSGDD-FIPN 1009
Query: 174 STVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
D+ E N P++++LTGPNMGGKST++RQ ++ I+AQM
Sbjct: 1010 ---------DISLNTENN-PPSLMVLTGPNMGGKSTLLRQSCILVIMAQM 1049
>gi|418055380|ref|ZP_12693435.1| DNA mismatch repair protein mutS [Hyphomicrobium denitrificans
1NES1]
gi|353210962|gb|EHB76363.1| DNA mismatch repair protein mutS [Hyphomicrobium denitrificans
1NES1]
Length = 942
Score = 53.1 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 36/59 (61%)
Query: 165 TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+G +I N ++G+ + +G E + L+TGPNM GKST +RQ LIT++AQM
Sbjct: 651 SGAPAFIENDCILGKDGSEAPAGFENAPDARIWLVTGPNMAGKSTFLRQNALITVMAQM 709
>gi|348688376|gb|EGZ28190.1| hypothetical protein PHYSODRAFT_353490 [Phytophthora sojae]
Length = 880
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 30/75 (40%), Positives = 44/75 (58%), Gaps = 14/75 (18%)
Query: 152 PYISALESLYPCAT---GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKS 208
P+I E ++PC G +IPN D G EG K ++LL+GPNMGGKS
Sbjct: 598 PFIDIEEGVHPCVAATYGSGDFIPN---------DAHLGIEG--KGQMVLLSGPNMGGKS 646
Query: 209 TVMRQLGLITILAQM 223
T++RQ ++T++AQ+
Sbjct: 647 TLLRQTCVLTLMAQI 661
>gi|302843362|ref|XP_002953223.1| hypothetical protein VOLCADRAFT_105835 [Volvox carteri f.
nagariensis]
gi|300261610|gb|EFJ45822.1| hypothetical protein VOLCADRAFT_105835 [Volvox carteri f.
nagariensis]
Length = 1515
Score = 53.1 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 35/54 (64%), Gaps = 7/54 (12%)
Query: 170 YIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++PN +GR GG P +LL+GPNMGGKST++RQ+ L T+LAQ+
Sbjct: 1195 FVPNDVRLGR-------GGSCGGAPPFILLSGPNMGGKSTLLRQVCLATVLAQI 1241
>gi|256829248|ref|YP_003157976.1| DNA mismatch repair protein MutS [Desulfomicrobium baculatum DSM
4028]
gi|256578424|gb|ACU89560.1| DNA mismatch repair protein MutS [Desulfomicrobium baculatum DSM
4028]
Length = 872
Score = 53.1 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 40/73 (54%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + A++ G YIPN + +SG VLL+TGPNM GKSTV
Sbjct: 590 HPVVEAVQ-------GRSGYIPNDLTLD------DSG-------RVLLITGPNMAGKSTV 629
Query: 211 MRQLGLITILAQM 223
+RQ+ LI ILAQM
Sbjct: 630 LRQVALICILAQM 642
>gi|422849889|ref|ZP_16896565.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK115]
gi|325689185|gb|EGD31192.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK115]
Length = 849
Score = 53.1 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS ++ +++ + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQSYIPNSILL-------------DQETDIQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|322386537|ref|ZP_08060164.1| DNA mismatch repair protein HexA [Streptococcus cristatus ATCC
51100]
gi|417921382|ref|ZP_12564873.1| DNA mismatch repair protein MutS [Streptococcus cristatus ATCC
51100]
gi|321269456|gb|EFX52389.1| DNA mismatch repair protein HexA [Streptococcus cristatus ATCC
51100]
gi|342834065|gb|EGU68340.1| DNA mismatch repair protein MutS [Streptococcus cristatus ATCC
51100]
Length = 849
Score = 53.1 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS ++ +++ + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQSYIPNSILL-------------DQETDIQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|83315667|ref|XP_730891.1| G/T mismatch binding protein [Plasmodium yoelii yoelii 17XNL]
gi|23490759|gb|EAA22456.1| G/T mismatch binding protein-related [Plasmodium yoelii yoelii]
Length = 1261
Score = 53.1 bits (126), Expect = 8e-05, Method: Composition-based stats.
Identities = 32/77 (41%), Positives = 45/77 (58%), Gaps = 11/77 (14%)
Query: 148 EEPHPYISALESLYPC-ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGG 206
+E P++ +++P AT +IPN+ +G KE K T LLLTGPNMGG
Sbjct: 970 KEKKPFLILENNIHPVVATLMPNFIPNNIYMGCDKE----------KETTLLLTGPNMGG 1019
Query: 207 KSTVMRQLGLITILAQM 223
KST++RQ + ILAQ+
Sbjct: 1020 KSTLLRQTAISVILAQI 1036
>gi|406904101|gb|EKD45986.1| hypothetical protein ACD_69C00059G0003 [uncultured bacterium]
Length = 862
Score = 53.1 bits (126), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 38/119 (31%), Positives = 60/119 (50%), Gaps = 20/119 (16%)
Query: 105 QICERGGVVDYKPQQSNNTIFSQRNILKDMYQQGVCVPTFLGLEEPHPYISALESLYPCA 164
Q+C+ +P Q+ T S+ ++L ++ ++ T L L +P +
Sbjct: 540 QLCQH-----LQPLQTMATALSELDVLNNLAERA----TTLKLVKPK---------FTNN 581
Query: 165 TGDQTYIPNSTVIGRCKED--VESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILA 221
G ++ +C ED V + E N ++L++TGPNMGGKST MRQ+ LITILA
Sbjct: 582 VGIHIEAGRHLIVEQCIEDPFVPNDTELNSNHSLLIITGPNMGGKSTYMRQVALITILA 640
>gi|422879902|ref|ZP_16926367.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1059]
gi|422929748|ref|ZP_16962689.1| DNA mismatch repair protein HexA [Streptococcus sanguinis ATCC
29667]
gi|422932714|ref|ZP_16965645.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK340]
gi|332365313|gb|EGJ43076.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1059]
gi|339614341|gb|EGQ19043.1| DNA mismatch repair protein HexA [Streptococcus sanguinis ATCC
29667]
gi|339618465|gb|EGQ23063.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK340]
Length = 849
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS ++ +++ + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQSYIPNSILL-------------DQETDIQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|323350709|ref|ZP_08086370.1| DNA mismatch repair protein HexA [Streptococcus sanguinis VMC66]
gi|322123129|gb|EFX94820.1| DNA mismatch repair protein HexA [Streptococcus sanguinis VMC66]
Length = 849
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS ++ +++ + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQSYIPNSILL-------------DQETDIQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|422877527|ref|ZP_16923997.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1056]
gi|332360166|gb|EGJ37980.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1056]
Length = 849
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS ++ +++ + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQSYIPNSILL-------------DQETDIQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|422847755|ref|ZP_16894438.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK72]
gi|325686753|gb|EGD28779.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK72]
Length = 849
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS ++ +++ + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQSYIPNSILL-------------DQETDIQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|401682709|ref|ZP_10814599.1| DNA mismatch repair protein MutS [Streptococcus sp. AS14]
gi|400183949|gb|EJO18196.1| DNA mismatch repair protein MutS [Streptococcus sp. AS14]
Length = 849
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS ++ +++ + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQSYIPNSILL-------------DQETDIQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|386714417|ref|YP_006180740.1| DNA mismatch repair protein MutS [Halobacillus halophilus DSM 2266]
gi|384073973|emb|CCG45466.1| DNA mismatch repair protein MutS [Halobacillus halophilus DSM 2266]
Length = 859
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 27/57 (47%), Positives = 33/57 (57%), Gaps = 13/57 (22%)
Query: 167 DQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
D+T++PN + N + VLL+TGPNM GKST MRQL LI IL QM
Sbjct: 586 DETFVPNDIYM-------------NEETDVLLITGPNMSGKSTYMRQLALIAILGQM 629
>gi|422861714|ref|ZP_16908354.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK330]
gi|327467947|gb|EGF13437.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK330]
Length = 849
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS ++ +++ + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQSYIPNSILL-------------DQETDIQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|422822661|ref|ZP_16870854.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK353]
gi|324989669|gb|EGC21613.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK353]
Length = 849
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS ++ +++ + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQSYIPNSILL-------------DQETDIQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|256078667|ref|XP_002575616.1| hypothetical protein [Schistosoma mansoni]
gi|360043418|emb|CCD78831.1| hypothetical protein Smp_042670.1 [Schistosoma mansoni]
Length = 1074
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 139 VCVPTFLGLEEP-HPYISALESLYPC-----ATGDQTYIPNSTVIGRCKEDVESGGEGN- 191
+C+P F+ L P + ++ ++PC + GD I N +G + S + +
Sbjct: 802 MCLPEFIDLNSSTEPLLEIVDGIHPCLINTFSGGD--IISNDIKLGTTSSMINSPTQHHT 859
Query: 192 -----RKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+V+L+TGPNMGGKST+MRQ L+ ILA +
Sbjct: 860 LHDMFNNASVILVTGPNMGGKSTLMRQAALLVILAHL 896
>gi|383784804|ref|YP_005469374.1| DNA mismatch repair protein [Leptospirillum ferrooxidans C2-3]
gi|383083717|dbj|BAM07244.1| putative DNA mismatch repair protein [Leptospirillum ferrooxidans
C2-3]
Length = 845
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 35/58 (60%), Gaps = 14/58 (24%)
Query: 169 TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQMENP 226
T++PN T +G SG T +LLTGPNM GKST MRQL LI I+AQM P
Sbjct: 605 TFMPNDTNLG-------SG-------TFVLLTGPNMAGKSTYMRQLALIQIMAQMGAP 648
>gi|125719039|ref|YP_001036172.1| DNA mismatch repair protein MutS [Streptococcus sanguinis SK36]
gi|166232147|sp|A3CR17.1|MUTS_STRSV RecName: Full=DNA mismatch repair protein MutS
gi|125498956|gb|ABN45622.1| DNA mismatch repair protein hexA, putative [Streptococcus sanguinis
SK36]
Length = 849
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS ++ +++ + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQSYIPNSILL-------------DQETDIQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|422857399|ref|ZP_16904049.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1057]
gi|327463450|gb|EGF09769.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK1057]
Length = 849
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS ++ +++ + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQSYIPNSILL-------------DQETDIQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|422850573|ref|ZP_16897243.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK150]
gi|325695321|gb|EGD37221.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK150]
Length = 849
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS ++ +++ + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQSYIPNSILL-------------DQETDIQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|301117392|ref|XP_002906424.1| DNA mismatch repair protein Msh6, putative [Phytophthora infestans
T30-4]
gi|262107773|gb|EEY65825.1| DNA mismatch repair protein Msh6, putative [Phytophthora infestans
T30-4]
Length = 1245
Score = 53.1 bits (126), Expect = 9e-05, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 45/75 (60%), Gaps = 14/75 (18%)
Query: 152 PYISALESLYPCAT---GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKS 208
P+I E ++PC G +IPN D + G +G K ++LL+GPNMGGKS
Sbjct: 971 PFIDIEEGVHPCVAATYGSGDFIPN---------DAQLGIQG--KGQMVLLSGPNMGGKS 1019
Query: 209 TVMRQLGLITILAQM 223
T++RQ ++T++AQ+
Sbjct: 1020 TLLRQTCVLTLMAQI 1034
>gi|168334525|ref|ZP_02692686.1| DNA mismatch repair protein MutS [Epulopiscium sp. 'N.t. morphotype
B']
Length = 846
Score = 53.1 bits (126), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 30/66 (45%), Positives = 41/66 (62%), Gaps = 15/66 (22%)
Query: 161 YPCA---TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLI 217
+P A G Q++I N T +G+ ED + + L+TGPNMGGKST M+Q+GLI
Sbjct: 572 HPVAETIIGTQSFISNDTCLGQ--EDTQ----------IALITGPNMGGKSTYMKQVGLI 619
Query: 218 TILAQM 223
ILAQ+
Sbjct: 620 VILAQI 625
>gi|388568076|ref|ZP_10154500.1| DNA mismatch repair ATPase protein [Hydrogenophaga sp. PBC]
gi|388264708|gb|EIK90274.1| DNA mismatch repair ATPase protein [Hydrogenophaga sp. PBC]
Length = 906
Score = 53.1 bits (126), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 45/92 (48%), Gaps = 27/92 (29%)
Query: 140 CVPTFLGLEEP--------HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGN 191
C P+F EP HP + A + TG +IPN TV+G
Sbjct: 610 CAPSFT--SEPGIEIRGGRHPVVEARLA----ETGAGAFIPNDTVLGP------------ 651
Query: 192 RKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
K + ++TGPNMGGKST MRQ+ +I +LA M
Sbjct: 652 -KARMQVITGPNMGGKSTYMRQVAVIALLASM 682
>gi|436842288|ref|YP_007326666.1| DNA mismatch repair protein mutS [Desulfovibrio hydrothermalis AM13
= DSM 14728]
gi|432171194|emb|CCO24565.1| DNA mismatch repair protein mutS [Desulfovibrio hydrothermalis AM13
= DSM 14728]
Length = 886
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 20/76 (26%)
Query: 148 EEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGK 207
E HP + A++ G YIPNS I + K +LL+TGPNM GK
Sbjct: 596 EGRHPVVEAVQ-------GSANYIPNSLTI-------------DEKRRILLITGPNMAGK 635
Query: 208 STVMRQLGLITILAQM 223
STV+RQ+ L+ I+AQ+
Sbjct: 636 STVLRQVALMGIMAQI 651
>gi|256078665|ref|XP_002575615.1| hypothetical protein [Schistosoma mansoni]
gi|360043417|emb|CCD78830.1| hypothetical protein Smp_042670.2 [Schistosoma mansoni]
Length = 1116
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/97 (32%), Positives = 51/97 (52%), Gaps = 14/97 (14%)
Query: 139 VCVPTFLGLEEP-HPYISALESLYPC-----ATGDQTYIPNSTVIGRCKEDVESGGEGN- 191
+C+P F+ L P + ++ ++PC + GD I N +G + S + +
Sbjct: 802 MCLPEFIDLNSSTEPLLEIVDGIHPCLINTFSGGD--IISNDIKLGTTSSMINSPTQHHT 859
Query: 192 -----RKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+V+L+TGPNMGGKST+MRQ L+ ILA +
Sbjct: 860 LHDMFNNASVILVTGPNMGGKSTLMRQAALLVILAHL 896
>gi|410927598|ref|XP_003977228.1| PREDICTED: DNA mismatch repair protein Msh2-like [Takifugu
rubripes]
Length = 937
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/84 (33%), Positives = 46/84 (54%), Gaps = 14/84 (16%)
Query: 142 PTFLGLEEPHPYISALESLYPC--ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLL 199
P LG E ++ L++ +PC A D +IPN + ++ + ++
Sbjct: 621 PELLGEEGGPRRVALLQARHPCMEADADTAFIPNDITFVQGQK------------SFYII 668
Query: 200 TGPNMGGKSTVMRQLGLITILAQM 223
TGPNMGGKST +RQ+G+I ++AQ+
Sbjct: 669 TGPNMGGKSTFIRQVGVIALMAQI 692
>gi|320547650|ref|ZP_08041935.1| DNA mismatch repair protein HexA [Streptococcus equinus ATCC 9812]
gi|320447725|gb|EFW88483.1| DNA mismatch repair protein HexA [Streptococcus equinus ATCC 9812]
Length = 856
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ GR + L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GTQEYIPNTITFGR-------------NTNIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|171778537|ref|ZP_02919664.1| hypothetical protein STRINF_00516 [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
gi|171282760|gb|EDT48184.1| DNA mismatch repair protein MutS [Streptococcus infantarius subsp.
infantarius ATCC BAA-102]
Length = 855
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ GR + L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GTQEYIPNTITFGR-------------NTNIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|408789864|ref|ZP_11201505.1| DNA mismatch repair protein MutS [Lactobacillus florum 2F]
gi|408520886|gb|EKK20908.1| DNA mismatch repair protein MutS [Lactobacillus florum 2F]
Length = 856
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN V+G + +LL+TGPNM GKST MRQL LI ILAQ+
Sbjct: 580 GAQQYVPNDVVMGP-------------ETAILLITGPNMSGKSTYMRQLALIVILAQV 624
>gi|406864269|gb|EKD17315.1| putative DNA mismatch repair protein msh3 [Marssonina brunnea f.
sp. 'multigermtubi' MB_m1]
Length = 1137
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 15/73 (20%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + E L P TYIPNST + + P +L+TGPNMGGKS+
Sbjct: 865 HPMV---EQLLP-----STYIPNSTTLSNAPSP-------STDPRAILITGPNMGGKSSY 909
Query: 211 MRQLGLITILAQM 223
+RQ+ LI +LAQ+
Sbjct: 910 VRQVALICLLAQL 922
>gi|343526249|ref|ZP_08763199.1| MutS domain V protein [Streptococcus constellatus subsp. pharyngis
SK1060 = CCUG 46377]
gi|343394200|gb|EGV06748.1| MutS domain V protein [Streptococcus constellatus subsp. pharyngis
SK1060 = CCUG 46377]
Length = 275
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + + V L+TGPNM GKST MRQL +I I+AQM
Sbjct: 112 GAQTYIPNSISM-------------DENVNVQLITGPNMSGKSTYMRQLAIIVIMAQM 156
>gi|281206806|gb|EFA80990.1| Muts-like protein [Polysphondylium pallidum PN500]
Length = 1231
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/75 (37%), Positives = 43/75 (57%), Gaps = 13/75 (17%)
Query: 151 HPYISALESLYPCAT--GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKS 208
H + A E +P T G +IPN +G +++P V++LTGPNMGGKS
Sbjct: 960 HALLDAKEMRHPAITLKGGDDFIPNDITLGI-----------DQQPGVMVLTGPNMGGKS 1008
Query: 209 TVMRQLGLITILAQM 223
T++RQ ++ I+AQ+
Sbjct: 1009 TLLRQCCILVIMAQL 1023
>gi|428220954|ref|YP_007105124.1| DNA mismatch repair protein MutS [Synechococcus sp. PCC 7502]
gi|427994294|gb|AFY72989.1| DNA mismatch repair protein MutS [Synechococcus sp. PCC 7502]
Length = 858
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 27/54 (50%), Positives = 37/54 (68%), Gaps = 11/54 (20%)
Query: 170 YIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++PNS +GR EG+ P V++LTGPNM GKST +RQLGLI ++AQ+
Sbjct: 618 FVPNSINLGR---------EGH--PDVIILTGPNMSGKSTFLRQLGLIQLMAQV 660
>gi|222529489|ref|YP_002573371.1| DNA mismatch repair protein MutS [Caldicellulosiruptor bescii DSM
6725]
gi|254766611|sp|B9MJU0.1|MUTS_ANATD RecName: Full=DNA mismatch repair protein MutS
gi|222456336|gb|ACM60598.1| DNA mismatch repair protein MutS [Caldicellulosiruptor bescii DSM
6725]
Length = 863
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 12/67 (17%)
Query: 166 GDQTYIPN------STVIGRCK---EDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGL 216
GD+ YI N +IGR D E NR VL++TGPNM GKST MRQ+ L
Sbjct: 566 GDRIYIKNGRHPVVEKMIGRGNFIPNDTELDQAENR---VLIITGPNMAGKSTYMRQVAL 622
Query: 217 ITILAQM 223
I I+AQM
Sbjct: 623 IVIMAQM 629
>gi|312127451|ref|YP_003992325.1| DNA mismatch repair protein muts [Caldicellulosiruptor
hydrothermalis 108]
gi|311777470|gb|ADQ06956.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
hydrothermalis 108]
Length = 863
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 12/67 (17%)
Query: 166 GDQTYIPN------STVIGRCK---EDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGL 216
GD+ YI N +IGR D E NR VL++TGPNM GKST MRQ+ L
Sbjct: 566 GDRIYIKNGRHPVVEKMIGRGNFIPNDTELDQAENR---VLIITGPNMAGKSTYMRQVAL 622
Query: 217 ITILAQM 223
I I+AQM
Sbjct: 623 IVIMAQM 629
>gi|220917347|ref|YP_002492651.1| DNA mismatch repair protein MutS [Anaeromyxobacter dehalogenans
2CP-1]
gi|254766610|sp|B8JA66.1|MUTS_ANAD2 RecName: Full=DNA mismatch repair protein MutS
gi|219955201|gb|ACL65585.1| DNA mismatch repair protein MutS [Anaeromyxobacter dehalogenans
2CP-1]
Length = 882
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 10/73 (13%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + A+ P A Y+PN ++ + E G G +L++TGPNM GKSTV
Sbjct: 587 HPVVEAVLPDGPAA-----YVPNDVLVAS-RGAPECGEHG----ALLVITGPNMAGKSTV 636
Query: 211 MRQLGLITILAQM 223
MRQ L+ +LAQM
Sbjct: 637 MRQAALVVLLAQM 649
>gi|448508881|ref|XP_003866016.1| Msh6 protein [Candida orthopsilosis Co 90-125]
gi|380350354|emb|CCG20576.1| Msh6 protein [Candida orthopsilosis Co 90-125]
Length = 1242
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 42/84 (50%), Gaps = 14/84 (16%)
Query: 140 CVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLL 199
C P F+ + H + E +PC G + +IPN D+ GGE +P LL
Sbjct: 947 CRPEFV--QNDHGVLDFKELRHPCFVGTKDFIPN---------DIHLGGE---EPNFGLL 992
Query: 200 TGPNMGGKSTVMRQLGLITILAQM 223
TG N GKST+MR L IL+Q+
Sbjct: 993 TGANAAGKSTIMRTTALAVILSQI 1016
>gi|312622277|ref|YP_004023890.1| DNA mismatch repair protein muts [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202744|gb|ADQ46071.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
kronotskyensis 2002]
Length = 863
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 12/67 (17%)
Query: 166 GDQTYIPN------STVIGRCK---EDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGL 216
GD+ YI N +IGR D E NR VL++TGPNM GKST MRQ+ L
Sbjct: 566 GDRIYIKNGRHPVVEKMIGRGNFIPNDTELDQAENR---VLIITGPNMAGKSTYMRQVAL 622
Query: 217 ITILAQM 223
I I+AQM
Sbjct: 623 IVIMAQM 629
>gi|418029374|ref|ZP_12667917.1| hypothetical protein LDBUL1632_00711 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
gi|354690049|gb|EHE90006.1| hypothetical protein LDBUL1632_00711 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1632]
Length = 856
Score = 52.8 bits (125), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 49/98 (50%), Gaps = 26/98 (26%)
Query: 132 KDMYQQGVCVPTFLGLEE------PHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVE 185
+D ++ C P+F E HP + E++ P D +YIPN V+
Sbjct: 552 QDAEEKNYCRPSFSSKNEIAVKNGRHPVV---EAVLP----DGSYIPNDLVM-------- 596
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ ++ L+TGPNM GKST MRQL LI I+AQ+
Sbjct: 597 -----DEDTSIYLITGPNMSGKSTYMRQLALIAIMAQI 629
>gi|339640062|ref|ZP_08661506.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 056
str. F0418]
gi|339453331|gb|EGP65946.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 056
str. F0418]
Length = 841
Score = 52.8 bits (125), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS V+ D ++ + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQSYIPNSVVM-----DADT--------DIQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|440795533|gb|ELR16653.1| MutS domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 1266
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 37/90 (41%), Positives = 49/90 (54%), Gaps = 18/90 (20%)
Query: 139 VCVPTFLGLEEPH---PYISALESLYPCATGD--QTYIPNSTVIGRCKEDVESGGEGNRK 193
+C PTF+ ++ P P + E +PC T T+IPN IG G
Sbjct: 977 MCRPTFV-VDVPEGTTPVLEVEELRHPCITPRVADTFIPNDIRIG-----------GPHA 1024
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
P V+LLTGPNMGGKST++RQ + I+AQM
Sbjct: 1025 P-VVLLTGPNMGGKSTLLRQACISVIMAQM 1053
>gi|352518374|ref|YP_004887691.1| DNA mismatch repair protein MutS [Tetragenococcus halophilus NBRC
12172]
gi|348602481|dbj|BAK95527.1| DNA mismatch repair protein MutS [Tetragenococcus halophilus NBRC
12172]
Length = 862
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS + +++ +LL+TGPNM GKST MRQL L ILAQM
Sbjct: 587 GAQEYIPNSIQM-------------DQETLILLITGPNMSGKSTYMRQLALTVILAQM 631
>gi|344996159|ref|YP_004798502.1| DNA mismatch repair protein mutS [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964378|gb|AEM73525.1| DNA mismatch repair protein mutS [Caldicellulosiruptor
lactoaceticus 6A]
Length = 863
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 12/67 (17%)
Query: 166 GDQTYIPN------STVIGRCK---EDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGL 216
GD+ YI N +IGR D E NR VL++TGPNM GKST MRQ+ L
Sbjct: 566 GDRIYIKNGRHPVVEKMIGRGNFIPNDTELDQAENR---VLIITGPNMAGKSTYMRQVAL 622
Query: 217 ITILAQM 223
I I+AQM
Sbjct: 623 IVIMAQM 629
>gi|157841276|ref|NP_001103184.1| DNA mismatch repair protein Msh3 [Danio rerio]
gi|123232732|emb|CAM16159.1| novel protein similar to vertebrate mutS homolog 3 (E. coli) (MSH3)
[Danio rerio]
Length = 1083
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I++L GDQ Y+PN D G+G R +++TGPNMGGKS+
Sbjct: 820 HPVITSL-------MGDQDQYVPN---------DTHLQGDGKR---AMIITGPNMGGKSS 860
Query: 210 VMRQLGLITILAQM 223
+RQ+ L+TI+AQ+
Sbjct: 861 YIRQVALVTIMAQL 874
>gi|418965200|ref|ZP_13516982.1| DNA mismatch repair protein MutS [Streptococcus constellatus subsp.
constellatus SK53]
gi|383343315|gb|EID21503.1| DNA mismatch repair protein MutS [Streptococcus constellatus subsp.
constellatus SK53]
Length = 852
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + E+V V L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQTYIPNSISM---DENV----------NVQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|423069768|ref|ZP_17058553.1| DNA mismatch repair protein mutS [Streptococcus intermedius F0395]
gi|355363642|gb|EHG11378.1| DNA mismatch repair protein mutS [Streptococcus intermedius F0395]
Length = 852
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + E+V V L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQTYIPNSISM---DENV----------NVQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|335032075|ref|ZP_08525484.1| DNA mismatch repair protein MutS [Streptococcus anginosus SK52 =
DSM 20563]
gi|333767941|gb|EGL45156.1| DNA mismatch repair protein MutS [Streptococcus anginosus SK52 =
DSM 20563]
Length = 855
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + E+V V L+TGPNM GKST MRQL +I I+AQM
Sbjct: 582 GAQTYIPNSISM---DENV----------NVQLITGPNMSGKSTYMRQLAIIVIMAQM 626
>gi|326668008|ref|XP_003198705.1| PREDICTED: DNA mismatch repair protein Msh3-like [Danio rerio]
Length = 1083
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I++L GDQ Y+PN D G+G R +++TGPNMGGKS+
Sbjct: 820 HPVITSL-------MGDQDQYVPN---------DTHLQGDGKR---AMIITGPNMGGKSS 860
Query: 210 VMRQLGLITILAQM 223
+RQ+ L+TI+AQ+
Sbjct: 861 YIRQVALVTIMAQL 874
>gi|323454910|gb|EGB10779.1| hypothetical protein AURANDRAFT_71064 [Aureococcus anophagefferens]
Length = 1140
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/71 (42%), Positives = 41/71 (57%), Gaps = 8/71 (11%)
Query: 152 PYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVM 211
P+++ + +PC GD VI DV GG KP +LLL+GPNMGGKST++
Sbjct: 904 PFVAIDDGAHPCLAGDGA--SAGDVIA---NDVHVGGA---KPRMLLLSGPNMGGKSTLL 955
Query: 212 RQLGLITILAQ 222
R + + ILAQ
Sbjct: 956 RHVCVSAILAQ 966
>gi|399216563|emb|CCF73250.1| unnamed protein product [Babesia microti strain RI]
Length = 1197
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 46/81 (56%), Gaps = 20/81 (24%)
Query: 144 FLGLEEP-HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGP 202
FL LE+ HP I +E +IPNS + C + E N LLLTGP
Sbjct: 938 FLHLEDSKHPIIGFIEP---------EFIPNSVCMN-CHD------ESN---ICLLLTGP 978
Query: 203 NMGGKSTVMRQLGLITILAQM 223
NMGGKST++RQ+ LITI+AQ+
Sbjct: 979 NMGGKSTLLRQICLITIMAQI 999
>gi|361130212|gb|EHL02066.1| putative DNA mismatch repair protein msh3 [Glarea lozoyensis 74030]
Length = 1041
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 46/92 (50%), Gaps = 26/92 (28%)
Query: 138 GVCVPTFLG------LEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGN 191
G C PTF ++ HP + E L P +YIPNST + +
Sbjct: 841 GYCKPTFTNTTQIDVVDGRHPMV---EQLLP-----TSYIPNSTSLSTAET--------- 883
Query: 192 RKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
LL+TGPNMGGKS+ +RQ+ LI ILAQ+
Sbjct: 884 ---RALLITGPNMGGKSSYVRQVALIQILAQI 912
>gi|242279428|ref|YP_002991557.1| DNA mismatch repair protein MutS [Desulfovibrio salexigens DSM
2638]
gi|242122322|gb|ACS80018.1| DNA mismatch repair protein MutS [Desulfovibrio salexigens DSM
2638]
Length = 885
Score = 52.4 bits (124), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 20/76 (26%)
Query: 148 EEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGK 207
E HP + A++ G YIPNS I + K +LL+TGPNM GK
Sbjct: 595 EGRHPVVEAVQ-------GAANYIPNSLTI-------------DEKRRILLITGPNMAGK 634
Query: 208 STVMRQLGLITILAQM 223
STV+RQ+ L+ I+AQ+
Sbjct: 635 STVLRQVALMGIMAQI 650
>gi|51091506|dbj|BAD36244.1| putative mismatch binding protein Mus3 [Oryza sativa Japonica Group]
gi|51091562|dbj|BAD36299.1| putative mismatch binding protein Mus3 [Oryza sativa Japonica Group]
Length = 1253
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Query: 130 ILKDMYQQGVCVPTFLGLEEPH--PYISALESLYPC----ATGDQTYIPNSTVIGRCKED 183
I D ++ C P P P + A +P + G +++PN D
Sbjct: 938 IASDFFEGPTCCPIIKESYGPDDTPTLHARNLGHPTLRSDSLGSGSFVPN---------D 988
Query: 184 VESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++ GG GN + ++LTGPNMGGKST++RQ+ L ILAQ+
Sbjct: 989 IKMGGPGN--ASFIVLTGPNMGGKSTLLRQVCLTIILAQI 1026
>gi|262283656|ref|ZP_06061421.1| DNA mismatch repair protein mutS [Streptococcus sp. 2_1_36FAA]
gi|262260713|gb|EEY79414.1| DNA mismatch repair protein mutS [Streptococcus sp. 2_1_36FAA]
Length = 847
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS E +++ + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQSYIPNSI-------------ELDQETDIQLITGPNMSGKSTYMRQLAMIVIMAQM 624
>gi|227514527|ref|ZP_03944576.1| DNA mismatch repair protein MutS [Lactobacillus fermentum ATCC
14931]
gi|385812095|ref|YP_005848486.1| DNA mismatch repair protein mutS [Lactobacillus fermentum CECT
5716]
gi|227087084|gb|EEI22396.1| DNA mismatch repair protein MutS [Lactobacillus fermentum ATCC
14931]
gi|299782994|gb|ADJ40992.1| DNA mismatch repair protein mutS [Lactobacillus fermentum CECT
5716]
Length = 873
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN DV GG+ ++LL+TGPNM GKST MRQL L ++AQM
Sbjct: 576 GHQEYVPN---------DVLMGGD----TSILLITGPNMSGKSTYMRQLALTAVMAQM 620
>gi|315221533|ref|ZP_07863453.1| DNA mismatch repair protein MutS [Streptococcus anginosus F0211]
gi|315189367|gb|EFU23062.1| DNA mismatch repair protein MutS [Streptococcus anginosus F0211]
Length = 855
Score = 52.4 bits (124), Expect = 1e-04, Method: Composition-based stats.
Identities = 30/58 (51%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + E+V V L+TGPNM GKST MRQL +I I+AQM
Sbjct: 582 GAQTYIPNSISM---DENV----------NVQLITGPNMSGKSTYMRQLAIIVIMAQM 626
>gi|348516286|ref|XP_003445670.1| PREDICTED: multivesicular body subunit 12B-like [Oreochromis
niloticus]
Length = 213
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/116 (29%), Positives = 59/116 (50%), Gaps = 6/116 (5%)
Query: 8 SFIPDDKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTE 67
S +P D PITA+ V+ K P GY V+++T D +DAD+ + F + TRYLC ++
Sbjct: 40 SQLPID-PITAVGVVSSPSKAPDGYYVVAQTTD-GSDADLRKVGLFKSKVTRYLCFTRKT 97
Query: 68 SLFQIDYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQQSNNT 123
+V ++ + + K+ P F + T+D + + +R V P++ T
Sbjct: 98 G----PDVVVDMKLTDIKDALPASFTPVQETMDRKEAAMRKRRLCVKMSPREDAKT 149
>gi|125563676|gb|EAZ09056.1| hypothetical protein OsI_31317 [Oryza sativa Indica Group]
Length = 1265
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Query: 130 ILKDMYQQGVCVPTFLGLEEPH--PYISALESLYPC----ATGDQTYIPNSTVIGRCKED 183
I D ++ C P P P + A +P + G +++PN D
Sbjct: 950 IASDFFEGPTCCPIIKESYGPDDTPTLHARNLGHPTLRSDSLGSGSFVPN---------D 1000
Query: 184 VESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++ GG GN + ++LTGPNMGGKST++RQ+ L ILAQ+
Sbjct: 1001 IKMGGPGN--ASFIVLTGPNMGGKSTLLRQVCLTIILAQI 1038
>gi|260663384|ref|ZP_05864275.1| DNA mismatch repair protein MutS [Lactobacillus fermentum 28-3-CHN]
gi|260552236|gb|EEX25288.1| DNA mismatch repair protein MutS [Lactobacillus fermentum 28-3-CHN]
Length = 880
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN DV GG+ ++LL+TGPNM GKST MRQL L ++AQM
Sbjct: 583 GHQEYVPN---------DVLMGGD----TSILLITGPNMSGKSTYMRQLALTAVMAQM 627
>gi|184154989|ref|YP_001843329.1| DNA mismatch repair protein MutS [Lactobacillus fermentum IFO 3956]
gi|238692955|sp|B2GB17.1|MUTS_LACF3 RecName: Full=DNA mismatch repair protein MutS
gi|183226333|dbj|BAG26849.1| DNA mismatch repair protein MutS [Lactobacillus fermentum IFO 3956]
Length = 880
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN DV GG+ ++LL+TGPNM GKST MRQL L ++AQM
Sbjct: 583 GHQEYVPN---------DVLMGGD----TSILLITGPNMSGKSTYMRQLALTAVMAQM 627
>gi|125605646|gb|EAZ44682.1| hypothetical protein OsJ_29308 [Oryza sativa Japonica Group]
Length = 1293
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 34/100 (34%), Positives = 51/100 (51%), Gaps = 17/100 (17%)
Query: 130 ILKDMYQQGVCVPTFLGLEEPH--PYISALESLYPC----ATGDQTYIPNSTVIGRCKED 183
I D ++ C P P P + A +P + G +++PN D
Sbjct: 978 IASDFFEGPTCCPIIKESYGPDDTPTLHARNLGHPTLRSDSLGSGSFVPN---------D 1028
Query: 184 VESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++ GG GN + ++LTGPNMGGKST++RQ+ L ILAQ+
Sbjct: 1029 IKMGGPGN--ASFIVLTGPNMGGKSTLLRQVCLTIILAQI 1066
>gi|449436747|ref|XP_004136154.1| PREDICTED: DNA mismatch repair protein MSH6-like [Cucumis sativus]
Length = 1307
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 34/83 (40%), Positives = 46/83 (55%), Gaps = 18/83 (21%)
Query: 141 VPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLT 200
VP F HP + + +SL G+ T++PN D+ GG G +LLT
Sbjct: 1012 VPRFTAKNLGHPILRS-DSL-----GEGTFVPN---------DITIGGSG---ANFILLT 1053
Query: 201 GPNMGGKSTVMRQLGLITILAQM 223
GPNMGGKST++RQ+ L ILAQ+
Sbjct: 1054 GPNMGGKSTLLRQVCLSVILAQI 1076
>gi|196247548|ref|ZP_03146250.1| DNA mismatch repair protein MutS [Geobacillus sp. G11MC16]
gi|196212332|gb|EDY07089.1| DNA mismatch repair protein MutS [Geobacillus sp. G11MC16]
Length = 909
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTY+PN + NR+ +LL+TGPNM GKST MRQ+ L I+AQ+
Sbjct: 584 GAQTYVPNDCYM-------------NREREMLLITGPNMAGKSTYMRQVALTAIMAQI 628
>gi|157150901|ref|YP_001451304.1| DNA mismatch repair protein MutS [Streptococcus gordonii str.
Challis substr. CH1]
gi|189083199|sp|A8AZU4.1|MUTS_STRGC RecName: Full=DNA mismatch repair protein MutS
gi|157075695|gb|ABV10378.1| DNA mismatch repair protein MutS [Streptococcus gordonii str.
Challis substr. CH1]
Length = 847
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS E +++ + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQSYIPNSI-------------ELDQETDIQLITGPNMSGKSTYMRQLAMIVIMAQM 624
>gi|138894826|ref|YP_001125279.1| DNA mismatch repair protein MutS [Geobacillus thermodenitrificans
NG80-2]
gi|189030720|sp|A4IMI0.1|MUTS_GEOTN RecName: Full=DNA mismatch repair protein MutS
gi|134266339|gb|ABO66534.1| DNA mismatch repair protein MutS [Geobacillus thermodenitrificans
NG80-2]
Length = 910
Score = 52.4 bits (124), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTY+PN + NR+ +LL+TGPNM GKST MRQ+ L I+AQ+
Sbjct: 585 GAQTYVPNDCYM-------------NREREMLLITGPNMAGKSTYMRQVALTAIMAQI 629
>gi|418964295|ref|ZP_13516109.1| DNA mismatch repair protein MutS [Streptococcus anginosus subsp.
whileyi CCUG 39159]
gi|383341100|gb|EID19368.1| DNA mismatch repair protein MutS [Streptococcus anginosus subsp.
whileyi CCUG 39159]
Length = 855
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + + V L+TGPNM GKST MRQL +I I+AQM
Sbjct: 582 GAQTYIPNSISM-------------DENVNVQLITGPNMSGKSTYMRQLAIIVIMAQM 626
>gi|319940116|ref|ZP_08014470.1| DNA mismatch repair protein mutS [Streptococcus anginosus 1_2_62CV]
gi|319810830|gb|EFW07157.1| DNA mismatch repair protein mutS [Streptococcus anginosus 1_2_62CV]
Length = 853
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + + V L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQTYIPNSISM-------------DENVNVQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|302871703|ref|YP_003840339.1| DNA mismatch repair protein MutS [Caldicellulosiruptor obsidiansis
OB47]
gi|302574562|gb|ADL42353.1| DNA mismatch repair protein MutS [Caldicellulosiruptor obsidiansis
OB47]
Length = 863
Score = 52.4 bits (124), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 38/67 (56%), Gaps = 12/67 (17%)
Query: 166 GDQTYIPN------STVIGRCK---EDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGL 216
GD+ YI N +IGR D E NR VL++TGPNM GKST MRQ+ L
Sbjct: 566 GDKIYIKNGRHPVVEKMIGRGNFIPNDTELDQVENR---VLIITGPNMAGKSTYMRQVAL 622
Query: 217 ITILAQM 223
I I+AQM
Sbjct: 623 IVIMAQM 629
>gi|81427976|ref|YP_394975.1| DNA mismatch repair protein MutS [Lactobacillus sakei subsp. sakei
23K]
gi|90109847|sp|Q38YR4.1|MUTS_LACSS RecName: Full=DNA mismatch repair protein MutS
gi|78609617|emb|CAI54663.1| DNA mismatch repair protein MutS [Lactobacillus sakei subsp. sakei
23K]
Length = 867
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ +G+ + +LL+TGPNM GKST MRQL L I+AQM
Sbjct: 587 GRQKYIPNAVQMGK-------------ETDMLLITGPNMSGKSTYMRQLALTVIMAQM 631
>gi|373465659|ref|ZP_09557113.1| DNA mismatch repair protein MutS [Lactobacillus kisonensis F0435]
gi|371759776|gb|EHO48486.1| DNA mismatch repair protein MutS [Lactobacillus kisonensis F0435]
Length = 660
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN DVE G + +VLL+TGPNM GKST MRQ+ L I+ QM
Sbjct: 378 GHQQYVPN---------DVEMGSD----TSVLLITGPNMSGKSTYMRQMALAVIMNQM 422
>gi|146297052|ref|YP_001180823.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
saccharolyticus DSM 8903]
gi|172046026|sp|A4XL47.1|MUTS_CALS8 RecName: Full=DNA mismatch repair protein MutS
gi|145410628|gb|ABP67632.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
saccharolyticus DSM 8903]
Length = 863
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 12/67 (17%)
Query: 166 GDQTYIPN------STVIGRCK---EDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGL 216
GD+ YI N +IG D E + NR VL++TGPNM GKST MRQ+ L
Sbjct: 566 GDRIYIKNGRHPVVEKMIGYSNFVPNDTELDNDQNR---VLIITGPNMAGKSTYMRQVAL 622
Query: 217 ITILAQM 223
I I+AQM
Sbjct: 623 IVIMAQM 629
>gi|313227995|emb|CBY23144.1| unnamed protein product [Oikopleura dioica]
Length = 1136
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/53 (49%), Positives = 35/53 (66%), Gaps = 13/53 (24%)
Query: 170 YIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
+IPN D+E GG+ +LLTGPNMGGKST++RQ+GL+T+LA
Sbjct: 906 FIPNDV-------DLEEGGK------CILLTGPNMGGKSTILRQIGLLTLLAH 945
>gi|124268027|ref|YP_001022031.1| DNA mismatch repair protein MutS [Methylibium petroleiphilum PM1]
gi|189083159|sp|A2SJQ7.1|MUTS_METPP RecName: Full=DNA mismatch repair protein MutS
gi|124260802|gb|ABM95796.1| DNA mismatch repair protein MutS [Methylibium petroleiphilum PM1]
Length = 870
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 33/90 (36%), Positives = 46/90 (51%), Gaps = 23/90 (25%)
Query: 140 CVPTFLGLEEPHPYISALESLYPCA------TGDQTYIPNSTVIGRCKEDVESGGEGNRK 193
C P F+ P I + +P TG ++IPN C+ D NR+
Sbjct: 572 CCPEFVS----QPCIEIEQGRHPVVEARLAETGGGSFIPND-----CRLD------ANRR 616
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+L++TGPNMGGKST MRQ+ L+ +LA M
Sbjct: 617 --MLVITGPNMGGKSTFMRQVALVVLLAAM 644
>gi|156083216|ref|XP_001609092.1| DNA repair protein [Babesia bovis T2Bo]
gi|154796342|gb|EDO05524.1| DNA repair protein, putative [Babesia bovis]
Length = 1313
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 30/87 (34%), Positives = 47/87 (54%), Gaps = 19/87 (21%)
Query: 137 QGVCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTV 196
+G P L + HP +S ++ + ++PN +G G+ +P +
Sbjct: 1046 RGTAEPFVLIRDAVHPIVSQIDP--------EGFVPNDVQLG----------HGDYQP-L 1086
Query: 197 LLLTGPNMGGKSTVMRQLGLITILAQM 223
+LLTGPNMGGKST++RQ+ L I+AQM
Sbjct: 1087 ILLTGPNMGGKSTLLRQVALCVIMAQM 1113
>gi|384159313|ref|YP_005541386.1| DNA mismatch repair protein MutS [Bacillus amyloliquefaciens TA208]
gi|328553401|gb|AEB23893.1| DNA mismatch repair protein MutS [Bacillus amyloliquefaciens TA208]
Length = 861
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q Y+PN+ ++G +E +LL+TGPNM GKST MRQ+ L++I+AQ+
Sbjct: 582 QEYVPNNCLMGESRE-------------MLLITGPNMSGKSTYMRQIALLSIMAQI 624
>gi|260794905|ref|XP_002592447.1| hypothetical protein BRAFLDRAFT_118915 [Branchiostoma floridae]
gi|229277667|gb|EEN48458.1| hypothetical protein BRAFLDRAFT_118915 [Branchiostoma floridae]
Length = 795
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/97 (24%), Positives = 54/97 (55%), Gaps = 2/97 (2%)
Query: 13 DKPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESLFQI 72
+ PIT + V+ ++CP G+ ++ +T D D D+W + F + TRY+C ++ +
Sbjct: 570 EAPITEVCVVSSKERCPQGFKLLGETEDG-KDGDLWTDKFFGKKVTRYICFNRAYANVGG 628
Query: 73 DYIVENICIINEKETPPDGFCLIARTLDSDQGQICER 109
+ ++ ++ ++ E++ P G+ I T D+ + + +R
Sbjct: 629 N-VLADVALLGERDIVPTGYSQITATADTGEVALKKR 664
>gi|308173667|ref|YP_003920372.1| DNA mismatch repair recognition factor [Bacillus amyloliquefaciens
DSM 7]
gi|384168360|ref|YP_005549738.1| DNA mismatch repair protein MutS [Bacillus amyloliquefaciens XH7]
gi|307606531|emb|CBI42902.1| DNA mismatch repair recognition factor [Bacillus amyloliquefaciens
DSM 7]
gi|341827639|gb|AEK88890.1| DNA mismatch repair protein MutS [Bacillus amyloliquefaciens XH7]
Length = 862
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q Y+PN+ ++G +E +LL+TGPNM GKST MRQ+ L++I+AQ+
Sbjct: 583 QEYVPNNCLMGESRE-------------MLLITGPNMSGKSTYMRQIALLSIMAQI 625
>gi|403383258|ref|ZP_10925315.1| DNA mismatch repair protein [Kurthia sp. JC30]
Length = 889
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 33/55 (60%), Gaps = 13/55 (23%)
Query: 169 TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
TY+PN V+ N ++L+TGPNM GKST MRQ+ LIT++AQM
Sbjct: 584 TYVPNDCVL-------------NENENMMLITGPNMSGKSTYMRQVALITVMAQM 625
>gi|384164252|ref|YP_005545631.1| DNA mismatch repair recognition factor [Bacillus amyloliquefaciens
LL3]
gi|328911807|gb|AEB63403.1| DNA mismatch repair recognition factor [Bacillus amyloliquefaciens
LL3]
Length = 855
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCA---TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
+ +E +P Q Y+PN+ ++G +E +LL+TGPNM GKST
Sbjct: 559 VKVIEGRHPVVEKVMDSQEYVPNNCLMGESRE-------------MLLITGPNMSGKSTY 605
Query: 211 MRQLGLITILAQM 223
MRQ+ L++I+AQ+
Sbjct: 606 MRQIALLSIMAQI 618
>gi|385816195|ref|YP_005852586.1| DNA mismatch repair protein [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
gi|325126232|gb|ADY85562.1| DNA mismatch repair protein [Lactobacillus delbrueckii subsp.
bulgaricus 2038]
Length = 856
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 50/98 (51%), Gaps = 26/98 (26%)
Query: 132 KDMYQQGVCVPTFLGLEE------PHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVE 185
+D ++ C P+F E HP + E++ P ++ YIPN V+ ED
Sbjct: 552 QDAEEKNYCRPSFSSKNEIAVKNGRHPVV---EAVLPASS----YIPNDLVM---DEDT- 600
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++ L+TGPNM GKST MRQL LI I+AQ+
Sbjct: 601 ---------SIYLITGPNMSGKSTYMRQLALIAIMAQI 629
>gi|223933229|ref|ZP_03625220.1| DNA mismatch repair protein MutS [Streptococcus suis 89/1591]
gi|386585132|ref|YP_006081535.1| DNA mismatch repair protein MutS [Streptococcus suis D9]
gi|223898159|gb|EEF64529.1| DNA mismatch repair protein MutS [Streptococcus suis 89/1591]
gi|353737278|gb|AER18287.1| DNA mismatch repair protein MutS [Streptococcus suis D9]
Length = 846
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + N + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GKQTYIPNSIHL-------------NTDTHMQLITGPNMSGKSTYMRQLAVIVIMAQM 624
>gi|302024621|ref|ZP_07249832.1| DNA mismatch repair protein MutS [Streptococcus suis 05HAS68]
gi|330833728|ref|YP_004402553.1| DNA mismatch repair protein MutS [Streptococcus suis ST3]
gi|329307951|gb|AEB82367.1| DNA mismatch repair protein MutS [Streptococcus suis ST3]
Length = 846
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + N + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GKQTYIPNSIHL-------------NTDTHMQLITGPNMSGKSTYMRQLAVIVIMAQM 624
>gi|398304583|ref|ZP_10508169.1| DNA mismatch repair protein MutS [Bacillus vallismortis DV1-F-3]
Length = 858
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 27/56 (48%), Positives = 37/56 (66%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q Y+PNS ++G NR+ +LL+TGPNM GKST MRQ+ LI+I+AQ+
Sbjct: 582 QEYVPNSCMMG-----------DNRQ--MLLITGPNMSGKSTYMRQIALISIMAQI 624
>gi|253752761|ref|YP_003025902.1| DNA mismatch repair protein MutS [Streptococcus suis SC84]
gi|253754586|ref|YP_003027727.1| DNA mismatch repair protein MutS [Streptococcus suis P1/7]
gi|253756519|ref|YP_003029659.1| DNA mismatch repair protein MutS [Streptococcus suis BM407]
gi|386580987|ref|YP_006077392.1| DNA mismatch repair protein MutS [Streptococcus suis JS14]
gi|386583064|ref|YP_006079468.1| DNA mismatch repair protein MutS [Streptococcus suis SS12]
gi|386589193|ref|YP_006085594.1| DNA mismatch repair protein MutS [Streptococcus suis A7]
gi|403062526|ref|YP_006650742.1| DNA mismatch repair protein MutS [Streptococcus suis S735]
gi|251817050|emb|CAZ52702.1| DNA mismatch repair protein MutS [Streptococcus suis SC84]
gi|251818983|emb|CAZ56830.1| DNA mismatch repair protein MutS [Streptococcus suis BM407]
gi|251820832|emb|CAR47598.1| DNA mismatch repair protein MutS [Streptococcus suis P1/7]
gi|319759179|gb|ADV71121.1| DNA mismatch repair protein MutS [Streptococcus suis JS14]
gi|353735210|gb|AER16220.1| DNA mismatch repair protein MutS [Streptococcus suis SS12]
gi|354986354|gb|AER45252.1| DNA mismatch repair protein MutS [Streptococcus suis A7]
gi|402809852|gb|AFR01344.1| DNA mismatch repair protein MutS [Streptococcus suis S735]
Length = 846
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + N + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GKQTYIPNSIHL-------------NTDTHMQLITGPNMSGKSTYMRQLAVIVIMAQM 624
>gi|254495018|ref|ZP_01053401.2| DNA mismatch repair protein MutS [Polaribacter sp. MED152]
gi|213690600|gb|EAQ42829.2| DNA mismatch repair protein MutS [Polaribacter sp. MED152]
Length = 860
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 18/73 (24%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP I E P DQTYI N V+ R ++ + +++TGPNM GKS +
Sbjct: 575 HPVI---EKQLPI---DQTYIANDVVLNRNQQQI------------IMITGPNMSGKSAI 616
Query: 211 MRQLGLITILAQM 223
+RQ LI +LAQM
Sbjct: 617 LRQTALIVLLAQM 629
>gi|418036222|ref|ZP_12674652.1| hypothetical protein LDBUL1519_01352 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
gi|354688571|gb|EHE88608.1| hypothetical protein LDBUL1519_01352 [Lactobacillus delbrueckii
subsp. bulgaricus CNCM I-1519]
Length = 856
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 48/98 (48%), Gaps = 26/98 (26%)
Query: 132 KDMYQQGVCVPTFLGLEE------PHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVE 185
+D ++ C P+F E HP + E++ P + YIPN V+
Sbjct: 552 QDAEEKNYCRPSFSSKNEIAVKNGRHPVV---EAVLPAGS----YIPNDLVM-------- 596
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ ++ L+TGPNM GKST MRQL LI I+AQ+
Sbjct: 597 -----DEDTSIYLITGPNMSGKSTYMRQLALIAIMAQI 629
>gi|326498831|dbj|BAK02401.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1331
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 33/83 (39%), Positives = 47/83 (56%), Gaps = 17/83 (20%)
Query: 141 VPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLT 200
PTF HP I + +SL G +++PN ++ GG GN + ++LT
Sbjct: 1039 TPTFHARNLGHPIIRS-DSL-----GKGSFVPN---------NINMGGPGN--ASFIILT 1081
Query: 201 GPNMGGKSTVMRQLGLITILAQM 223
GPNMGGKST++RQ+ L ILAQ+
Sbjct: 1082 GPNMGGKSTLLRQVCLTIILAQI 1104
>gi|269926438|ref|YP_003323061.1| DNA mismatch repair protein MutS [Thermobaculum terrenum ATCC
BAA-798]
gi|269790098|gb|ACZ42239.1| DNA mismatch repair protein MutS [Thermobaculum terrenum ATCC
BAA-798]
Length = 930
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 32/74 (43%), Positives = 42/74 (56%), Gaps = 21/74 (28%)
Query: 151 HPYI-SALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP + S+LE + ++PN IG GN P VLL+TGPNMGGKST
Sbjct: 597 HPVVESSLEG--------ERFVPNDCYIG-----------GNW-PRVLLITGPNMGGKST 636
Query: 210 VMRQLGLITILAQM 223
+RQ+ LI +LAQ+
Sbjct: 637 YLRQVALIVLLAQI 650
>gi|146319777|ref|YP_001199489.1| DNA mismatch repair protein MutS [Streptococcus suis 05ZYH33]
gi|145690583|gb|ABP91089.1| Mismatch repair ATPase (MutS family) [Streptococcus suis 05ZYH33]
Length = 726
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + N + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 460 GKQTYIPNSIHL-------------NTDTHMQLITGPNMSGKSTYMRQLAVIVIMAQM 504
>gi|146321975|ref|YP_001201686.1| DNA mismatch repair protein MutS [Streptococcus suis 98HAH33]
gi|386578921|ref|YP_006075327.1| MutS-1 protein [Streptococcus suis GZ1]
gi|189083200|sp|A4W4J7.1|MUTS_STRS2 RecName: Full=DNA mismatch repair protein MutS
gi|145692781|gb|ABP93286.1| Mismatch repair ATPase (MutS family) [Streptococcus suis 98HAH33]
gi|292559384|gb|ADE32385.1| MutS-1 protein [Streptococcus suis GZ1]
Length = 847
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + N + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 581 GKQTYIPNSIHL-------------NTDTHMQLITGPNMSGKSTYMRQLAVIVIMAQM 625
>gi|229552974|ref|ZP_04441699.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus LMS2-1]
gi|423080063|ref|ZP_17068731.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus ATCC
21052]
gi|229313663|gb|EEN79636.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus LMS2-1]
gi|357544583|gb|EHJ26586.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus ATCC
21052]
Length = 848
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 13/57 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
G +YIPN ++ +R +LL+TGPNM GKST MRQL LI I+AQ
Sbjct: 577 GQDSYIPNDVIM-------------DRDTDMLLITGPNMSGKSTYMRQLALIVIMAQ 620
>gi|389857633|ref|YP_006359876.1| DNA mismatch repair protein MutS [Streptococcus suis ST1]
gi|353741351|gb|AER22358.1| DNA mismatch repair protein MutS [Streptococcus suis ST1]
Length = 846
Score = 52.0 bits (123), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + N + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GKQTYIPNSIHL-------------NTDTHMQLITGPNMSGKSTYMRQLAVIVIMAQM 624
>gi|386587200|ref|YP_006083602.1| DNA mismatch repair protein MutS [Streptococcus suis D12]
gi|353739346|gb|AER20354.1| DNA mismatch repair protein MutS [Streptococcus suis D12]
Length = 846
Score = 52.0 bits (123), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + N + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GKQTYIPNSIHL-------------NTDTHMQLITGPNMSGKSTYMRQLAVIVIMAQM 624
>gi|421768634|ref|ZP_16205345.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus LRHMDP2]
gi|421772450|ref|ZP_16209105.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus LRHMDP3]
gi|411183650|gb|EKS50786.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus LRHMDP3]
gi|411186307|gb|EKS53432.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus LRHMDP2]
Length = 860
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 13/57 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
G +YIPN ++ +R +LL+TGPNM GKST MRQL LI I+AQ
Sbjct: 589 GQDSYIPNDVIM-------------DRDTDMLLITGPNMSGKSTYMRQLALIVIMAQ 632
>gi|385828869|ref|YP_005866641.1| DNA mismatch repair protein [Lactobacillus rhamnosus GG]
gi|259650514|dbj|BAI42676.1| DNA mismatch repair protein [Lactobacillus rhamnosus GG]
Length = 860
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 13/57 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
G +YIPN ++ +R +LL+TGPNM GKST MRQL LI I+AQ
Sbjct: 589 GQDSYIPNDVIM-------------DRDTDMLLITGPNMSGKSTYMRQLALIVIMAQ 632
>gi|199597365|ref|ZP_03210795.1| Mismatch repair ATPase (MutS family) protein [Lactobacillus
rhamnosus HN001]
gi|258540414|ref|YP_003174913.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus Lc 705]
gi|385836052|ref|YP_005873827.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus ATCC
8530]
gi|418072689|ref|ZP_12709959.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus R0011]
gi|199591625|gb|EDY99701.1| Mismatch repair ATPase (MutS family) protein [Lactobacillus
rhamnosus HN001]
gi|257152090|emb|CAR91062.1| DNA mismatch repair protein mutS [Lactobacillus rhamnosus Lc 705]
gi|355395544|gb|AER64974.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus ATCC
8530]
gi|357537086|gb|EHJ21113.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus R0011]
Length = 857
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 13/57 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
G +YIPN ++ +R +LL+TGPNM GKST MRQL LI I+AQ
Sbjct: 586 GQDSYIPNDVIM-------------DRDTDMLLITGPNMSGKSTYMRQLALIVIMAQ 629
>gi|258509230|ref|YP_003171981.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus GG]
gi|257149157|emb|CAR88130.1| DNA mismatch repair protein mutS [Lactobacillus rhamnosus GG]
Length = 857
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 33/57 (57%), Gaps = 13/57 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
G +YIPN ++ +R +LL+TGPNM GKST MRQL LI I+AQ
Sbjct: 586 GQDSYIPNDVIM-------------DRDTDMLLITGPNMSGKSTYMRQLALIVIMAQ 629
>gi|420261475|ref|ZP_14764119.1| DNA mismatch repair protein HexA [Enterococcus sp. C1]
gi|394771409|gb|EJF51170.1| DNA mismatch repair protein HexA [Enterococcus sp. C1]
Length = 850
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS V+ E+ E +LL+TGPNM GKST MRQ L+ I+AQ+
Sbjct: 586 GHQEYIPNSIVM---DEETE----------ILLITGPNMSGKSTYMRQFALLVIMAQI 630
>gi|325567292|ref|ZP_08143959.1| DNA mismatch repair protein HexA [Enterococcus casseliflavus ATCC
12755]
gi|325158725|gb|EGC70871.1| DNA mismatch repair protein HexA [Enterococcus casseliflavus ATCC
12755]
Length = 853
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS V+ E+ E +LL+TGPNM GKST MRQ L+ I+AQ+
Sbjct: 589 GHQEYIPNSIVM---DEETE----------ILLITGPNMSGKSTYMRQFALLVIMAQI 633
>gi|257876210|ref|ZP_05655863.1| DNA mismatch repair protein mutS [Enterococcus casseliflavus EC20]
gi|257810376|gb|EEV39196.1| DNA mismatch repair protein mutS [Enterococcus casseliflavus EC20]
Length = 853
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS V+ E+ E +LL+TGPNM GKST MRQ L+ I+AQ+
Sbjct: 589 GHQEYIPNSIVM---DEETE----------ILLITGPNMSGKSTYMRQFALLVIMAQI 633
>gi|257866605|ref|ZP_05646258.1| DNA mismatch repair protein mutS [Enterococcus casseliflavus EC30]
gi|257872879|ref|ZP_05652532.1| DNA mismatch repair protein mutS [Enterococcus casseliflavus EC10]
gi|257800563|gb|EEV29591.1| DNA mismatch repair protein mutS [Enterococcus casseliflavus EC30]
gi|257807043|gb|EEV35865.1| DNA mismatch repair protein mutS [Enterococcus casseliflavus EC10]
Length = 853
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS V+ E+ E +LL+TGPNM GKST MRQ L+ I+AQ+
Sbjct: 589 GHQEYIPNSIVM---DEETE----------ILLITGPNMSGKSTYMRQFALLVIMAQI 633
>gi|219109807|ref|XP_002176657.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411192|gb|EEC51120.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1423
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 31/75 (41%), Positives = 43/75 (57%), Gaps = 10/75 (13%)
Query: 152 PYISALESLYPC---ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKS 208
P I +PC + G +IPN +G E+ + + VLLL+GPNMGGKS
Sbjct: 1166 PTIRVTGGRHPCIESSIGSNDFIPNDLSLG-----TETSQDNASR--VLLLSGPNMGGKS 1218
Query: 209 TVMRQLGLITILAQM 223
T++RQ LI+ILAQ+
Sbjct: 1219 TLLRQTCLISILAQI 1233
>gi|154254030|ref|YP_001414854.1| DNA mismatch repair protein MutS [Parvibaculum lavamentivorans
DS-1]
gi|189083166|sp|A7HZ64.1|MUTS_PARL1 RecName: Full=DNA mismatch repair protein MutS
gi|154157980|gb|ABS65197.1| DNA mismatch repair protein MutS [Parvibaculum lavamentivorans
DS-1]
Length = 908
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 14/73 (19%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + A A Q ++PN T + ESGG + + LLTGPNM GKST
Sbjct: 623 HPVVEA-----ALARTGQAFVPNDTSL-----SAESGGGKH----IWLLTGPNMAGKSTF 668
Query: 211 MRQLGLITILAQM 223
+RQ LI I+AQM
Sbjct: 669 LRQNALIAIMAQM 681
>gi|417091961|ref|ZP_11956695.1| DNA mismatch repair protein MutS [Streptococcus suis R61]
gi|353532530|gb|EHC02199.1| DNA mismatch repair protein MutS [Streptococcus suis R61]
Length = 846
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + N + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GKQTYIPNSIHL-------------NTDTHMQLITGPNMSGKSTYMRQLAVIVIMAQM 624
>gi|424780873|ref|ZP_18207740.1| DNA mismatch repair protein MutS [Catellicoccus marimammalium
M35/04/3]
gi|422842574|gb|EKU27025.1| DNA mismatch repair protein MutS [Catellicoccus marimammalium
M35/04/3]
Length = 868
Score = 51.6 bits (122), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 32/91 (35%), Positives = 44/91 (48%), Gaps = 20/91 (21%)
Query: 136 QQGVCVPTFLGLEEPHPYISALESLYPC---ATGDQTYIPNSTVIGRCKEDVESGGEGNR 192
++ C PTF E H + ++ +P G Y+PN V+ ++
Sbjct: 551 ERNYCRPTF---NEEHE-LKIIDGRHPVIEKVMGSNEYVPNDIVM-------------DK 593
Query: 193 KPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
LL+TGPNM GKST MRQL L I+AQM
Sbjct: 594 NTYELLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|116514520|ref|YP_813426.1| DNA mismatch repair protein MutS [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
gi|122274748|sp|Q048Y4.1|MUTS_LACDB RecName: Full=DNA mismatch repair protein MutS
gi|116093835|gb|ABJ58988.1| DNA mismatch repair protein MutS [Lactobacillus delbrueckii subsp.
bulgaricus ATCC BAA-365]
Length = 856
Score = 51.6 bits (122), Expect = 2e-04, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 26/98 (26%)
Query: 132 KDMYQQGVCVPTFLGLEE------PHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVE 185
+D ++ C P+F E HP + E++ P + YIPN V+ ED
Sbjct: 552 QDAEEKNYCRPSFSSKNEIAVKNGRHPVV---EAVLPAGS----YIPNDLVM---DEDT- 600
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++ L+TGPNM GKST MRQL LI I+AQ+
Sbjct: 601 ---------SIYLITGPNMSGKSTYMRQLALIAIMAQI 629
>gi|386317938|ref|YP_006014102.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
gi|323128225|gb|ADX25522.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis ATCC 12394]
Length = 851
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS N++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GVQEYIPNSISF-------------NQETSIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|251783479|ref|YP_002997784.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
gi|242392111|dbj|BAH82570.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis GGS_124]
Length = 851
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS N++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GVQEYIPNSISF-------------NQETSIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|300811157|ref|ZP_07091669.1| DNA mismatch repair protein MutS [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
gi|300497861|gb|EFK32871.1| DNA mismatch repair protein MutS [Lactobacillus delbrueckii subsp.
bulgaricus PB2003/044-T3-4]
Length = 856
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 26/98 (26%)
Query: 132 KDMYQQGVCVPTFLGLEE------PHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVE 185
+D ++ C P+F E HP + E++ P + YIPN V+ ED
Sbjct: 552 QDAEEKNYCRPSFSSKNEIAVKNGRHPVV---EAVLPAGS----YIPNDLVM---DEDT- 600
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++ L+TGPNM GKST MRQL LI I+AQ+
Sbjct: 601 ---------SIYLITGPNMSGKSTYMRQLALIAIMAQI 629
>gi|385260920|ref|ZP_10039058.1| DNA mismatch repair protein MutS [Streptococcus sp. SK140]
gi|385190193|gb|EIF37642.1| DNA mismatch repair protein MutS [Streptococcus sp. SK140]
Length = 844
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS +G ED ++ L+TGPNM GKST MRQL + ++AQ+
Sbjct: 580 GAQTYIPNSIQMG---EDT----------SIQLITGPNMSGKSTYMRQLAMTAVMAQL 624
>gi|86158123|ref|YP_464908.1| DNA mismatch repair protein MutS [Anaeromyxobacter dehalogenans
2CP-C]
gi|123497694|sp|Q2IIJ3.1|MUTS_ANADE RecName: Full=DNA mismatch repair protein MutS
gi|85774634|gb|ABC81471.1| DNA mismatch repair protein MutS [Anaeromyxobacter dehalogenans
2CP-C]
Length = 882
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/75 (40%), Positives = 40/75 (53%), Gaps = 14/75 (18%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGR--CKEDVESGGEGNRKPTVLLLTGPNMGGKS 208
HP + A+ P A Y+PN ++ E E G +L++TGPNM GKS
Sbjct: 587 HPVVEAVLPDGPAA-----YVPNDVLVASRGAPECAEHGA-------LLVITGPNMAGKS 634
Query: 209 TVMRQLGLITILAQM 223
TVMRQ L+ +LAQM
Sbjct: 635 TVMRQAALVVLLAQM 649
>gi|428216182|ref|YP_007089326.1| DNA mismatch repair protein MutS [Oscillatoria acuminata PCC 6304]
gi|428004563|gb|AFY85406.1| DNA mismatch repair protein MutS [Oscillatoria acuminata PCC 6304]
Length = 887
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/53 (43%), Positives = 36/53 (67%)
Query: 170 YIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
++PNST +G ++ +S + P +++LTGPN GKS +RQ+GLI +LAQ
Sbjct: 641 FVPNSTRLGNAEDPGKSESDHRLAPDLIILTGPNASGKSCYLRQVGLIQLLAQ 693
>gi|408402568|ref|YP_006860532.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis RE378]
gi|417928022|ref|ZP_12571410.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|340765896|gb|EGR88422.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis SK1250]
gi|407968797|dbj|BAM62035.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis RE378]
Length = 851
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS N++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GVQEYIPNSISF-------------NQETSIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|417752051|ref|ZP_12400291.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
gi|333772185|gb|EGL49058.1| DNA mismatch repair protein MutS [Streptococcus dysgalactiae subsp.
equisimilis SK1249]
Length = 851
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS N++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GVQEYIPNSISF-------------NQETSIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|440297793|gb|ELP90434.1| DNA mismatch repair protein msH6, putative [Entamoeba invadens IP1]
Length = 959
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/78 (39%), Positives = 43/78 (55%), Gaps = 4/78 (5%)
Query: 147 LEEPHPYISALESLYPCATG-DQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMG 205
+EE Y ++ Y A G Y+ S+ D+E GGE P ++LTGPNMG
Sbjct: 697 MEEDEKY-KTIKGAYFSAKGLRHPYLTVSSKTTAVPSDIEMGGENT--PKSIVLTGPNMG 753
Query: 206 GKSTVMRQLGLITILAQM 223
GKST++R + L I+AQM
Sbjct: 754 GKSTLLRTVCLAVIMAQM 771
>gi|313124269|ref|YP_004034528.1| DNA mismatch repair protein muts [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|422844178|ref|ZP_16890888.1| DNA mismatch repair protein HexA [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
gi|312280832|gb|ADQ61551.1| DNA mismatch repair protein mutS [Lactobacillus delbrueckii subsp.
bulgaricus ND02]
gi|325685683|gb|EGD27762.1| DNA mismatch repair protein HexA [Lactobacillus delbrueckii subsp.
lactis DSM 20072]
Length = 856
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 26/98 (26%)
Query: 132 KDMYQQGVCVPTFLGLEE------PHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVE 185
+D ++ C P+F E HP + E++ P + YIPN V+ ED
Sbjct: 552 QDAEEKNYCRPSFSSKNEIAVKNGRHPVV---EAVLPAGS----YIPNDLVM---DEDT- 600
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++ L+TGPNM GKST MRQL LI I+AQ+
Sbjct: 601 ---------SIYLITGPNMSGKSTYMRQLALIAIMAQI 629
>gi|312135299|ref|YP_004002637.1| DNA mismatch repair protein muts [Caldicellulosiruptor owensensis
OL]
gi|311775350|gb|ADQ04837.1| DNA mismatch repair protein MutS [Caldicellulosiruptor owensensis
OL]
Length = 863
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 38/67 (56%), Gaps = 12/67 (17%)
Query: 166 GDQTYIPN------STVIGRCK---EDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGL 216
GD+ YI N +IGR D E NR +L++TGPNM GKST MRQ+ L
Sbjct: 566 GDKIYIKNGRHPVVEKMIGRGNFIPNDTELDQVENR---ILIITGPNMAGKSTYMRQVAL 622
Query: 217 ITILAQM 223
I I+AQM
Sbjct: 623 IVIMAQM 629
>gi|34481396|emb|CAC79990.1| sperm protein [Homo sapiens]
Length = 328
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 40/120 (33%), Positives = 59/120 (49%), Gaps = 16/120 (13%)
Query: 114 DYKPQQSNNTIFSQRNILKDM--YQQG----VCVPTFLGLEEPHPYISALESLYPCAT-- 165
+YK QS + ++L + Y +G +C P L E+ HP++ S +PC T
Sbjct: 11 NYKDWQSAVECIAVLDVLLCLANYSRGGDGPMCRPVILLPEDTHPFLKLKGSPHPCITKT 70
Query: 166 --GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
GD +IPN +IG C+E+ + G K V LL G MRQ GL+ ++AQM
Sbjct: 71 FFGDD-FIPNDILIG-CEEEEQENG----KAIVCLLLDQIWGASLRXMRQAGLLAVMAQM 124
>gi|410495886|ref|YP_006905732.1| DNA mismatch repair protein mutS [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
gi|410441046|emb|CCI63674.1| DNA mismatch repair protein mutS [Streptococcus dysgalactiae subsp.
equisimilis AC-2713]
Length = 851
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS N++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GVQEYIPNSISF-------------NQETSIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|259502855|ref|ZP_05745757.1| DNA mismatch repair protein HexA [Lactobacillus antri DSM 16041]
gi|259169222|gb|EEW53717.1| DNA mismatch repair protein HexA [Lactobacillus antri DSM 16041]
Length = 873
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN DV+ G + + +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 576 GHQEYVPN---------DVQMGDDTD----ILLITGPNMSGKSTYMRQLALTAVMAQM 620
>gi|394994051|ref|ZP_10386787.1| DNA mismatch repair protein MutS [Bacillus sp. 916]
gi|393805130|gb|EJD66513.1| DNA mismatch repair protein MutS [Bacillus sp. 916]
Length = 861
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCATG---DQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
+ +E +P Q Y+PN+ ++G +E +LL+TGPNM GKST
Sbjct: 565 VKVIEGRHPVVEKVMDSQEYVPNNCLMGDSRE-------------MLLITGPNMSGKSTY 611
Query: 211 MRQLGLITILAQM 223
MRQ+ L++I+AQ+
Sbjct: 612 MRQIALLSIMAQI 624
>gi|392330255|ref|ZP_10274871.1| DNA mismatch repair protein MutS [Streptococcus canis FSL Z3-227]
gi|391420127|gb|EIQ82938.1| DNA mismatch repair protein MutS [Streptococcus canis FSL Z3-227]
Length = 851
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS ++K ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GVQEYIPNSISF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|421731624|ref|ZP_16170747.1| DNA mismatch repair protein MutS [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|451346923|ref|YP_007445554.1| DNA mismatch repair protein MutS [Bacillus amyloliquefaciens IT-45]
gi|407073837|gb|EKE46827.1| DNA mismatch repair protein MutS [Bacillus amyloliquefaciens subsp.
plantarum M27]
gi|449850681|gb|AGF27673.1| DNA mismatch repair protein MutS [Bacillus amyloliquefaciens IT-45]
Length = 861
Score = 51.6 bits (122), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 41/73 (56%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCATG---DQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
+ +E +P Q Y+PN+ ++G +E +LL+TGPNM GKST
Sbjct: 565 VKVIEGRHPVVEKVMDSQEYVPNNCLMGDSRE-------------MLLITGPNMSGKSTY 611
Query: 211 MRQLGLITILAQM 223
MRQ+ L++I+AQ+
Sbjct: 612 MRQIALLSIMAQI 624
>gi|153004969|ref|YP_001379294.1| DNA mismatch repair protein MutS [Anaeromyxobacter sp. Fw109-5]
gi|189030440|sp|A7HC64.1|MUTS_ANADF RecName: Full=DNA mismatch repair protein MutS
gi|152028542|gb|ABS26310.1| DNA mismatch repair protein MutS [Anaeromyxobacter sp. Fw109-5]
Length = 882
Score = 51.6 bits (122), Expect = 3e-04, Method: Composition-based stats.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 16/94 (17%)
Query: 136 QQGVCVPTFLGLE------EPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGE 189
++G C P G E HP + E++ P G ++PN ++ E
Sbjct: 565 ERGYCRPEVDGSEVLEIVDGRHPVV---EAVLP--EGPAGFVPNDVLVAS-----RGALE 614
Query: 190 GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
R + ++TGPNM GKSTVMRQ L+T+LAQM
Sbjct: 615 CERLGALHVITGPNMAGKSTVMRQAALVTLLAQM 648
>gi|387898285|ref|YP_006328581.1| DNA mismatch repair protein [Bacillus amyloliquefaciens Y2]
gi|387172395|gb|AFJ61856.1| DNA mismatch repair protein [Bacillus amyloliquefaciens Y2]
Length = 853
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q Y+PN+ ++G +E +LL+TGPNM GKST MRQ+ L++I+AQ+
Sbjct: 576 QEYVPNNCLMGDSRE-------------MLLITGPNMSGKSTYMRQIALLSIMAQI 618
>gi|384265289|ref|YP_005420996.1| DNA mismatch repair protein mutS [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
gi|380498642|emb|CCG49680.1| DNA mismatch repair protein mutS [Bacillus amyloliquefaciens subsp.
plantarum YAU B9601-Y2]
Length = 860
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q Y+PN+ ++G +E +LL+TGPNM GKST MRQ+ L++I+AQ+
Sbjct: 583 QEYVPNNCLMGDSRE-------------MLLITGPNMSGKSTYMRQIALLSIMAQI 625
>gi|348525014|ref|XP_003450017.1| PREDICTED: multivesicular body subunit 12A-like [Oreochromis
niloticus]
Length = 284
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/135 (27%), Positives = 64/135 (47%), Gaps = 19/135 (14%)
Query: 14 KPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESLFQID 73
+P+TA+A + CP +T+IS T D A+ R F ++ YLC SK +
Sbjct: 10 RPVTAVAWASNSGTCPKDFTLISLTED-GASANFTR--TFGMKSGYYLCYSKDSAG---G 63
Query: 74 YIVENICIINEKETPPDGFCLIARTLD-----SDQGQICER--------GGVVDYKPQQS 120
+V +I I+++K++ P G+C IA L+ S + ++C R V+D K
Sbjct: 64 MVVSDIRILSDKDSLPHGYCFIAEHLEPKATVSKKKRVCVRIVPVGSVETAVLDIKLTAK 123
Query: 121 NNTIFSQRNILKDMY 135
+ + L D++
Sbjct: 124 SKMMLQHYTFLGDIH 138
>gi|452855651|ref|YP_007497334.1| DNA mismatch repair recognition factor [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
gi|452079911|emb|CCP21669.1| DNA mismatch repair recognition factor [Bacillus amyloliquefaciens
subsp. plantarum UCMB5036]
Length = 862
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q Y+PN+ ++G +E +LL+TGPNM GKST MRQ+ L++I+AQ+
Sbjct: 583 QEYVPNNCLMGDSRE-------------MLLITGPNMSGKSTYMRQIALLSIMAQI 625
>gi|429505258|ref|YP_007186442.1| DNA mismatch repair protein MutS [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
gi|429486848|gb|AFZ90772.1| DNA mismatch repair protein MutS [Bacillus amyloliquefaciens subsp.
plantarum AS43.3]
Length = 842
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q Y+PN+ ++G +E +LL+TGPNM GKST MRQ+ L++I+AQ+
Sbjct: 563 QEYVPNNCLMGDSRE-------------MLLITGPNMSGKSTYMRQIALLSIMAQI 605
>gi|385264831|ref|ZP_10042918.1| DNA mismatch repair protein MutS [Bacillus sp. 5B6]
gi|385149327|gb|EIF13264.1| DNA mismatch repair protein MutS [Bacillus sp. 5B6]
Length = 862
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q Y+PN+ ++G +E +LL+TGPNM GKST MRQ+ L++I+AQ+
Sbjct: 583 QEYVPNNCLMGDSRE-------------MLLITGPNMSGKSTYMRQIALLSIMAQI 625
>gi|118579497|ref|YP_900747.1| DNA mismatch repair protein MutS [Pelobacter propionicus DSM 2379]
gi|189083167|sp|A1AMW9.1|MUTS_PELPD RecName: Full=DNA mismatch repair protein MutS
gi|118502207|gb|ABK98689.1| DNA mismatch repair protein MutS [Pelobacter propionicus DSM 2379]
Length = 870
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 28/72 (38%), Positives = 41/72 (56%), Gaps = 19/72 (26%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP I A++ + ++PN T++ GGE +L++TGPNM GKST
Sbjct: 590 HPVIEAMKL-------GERFVPNDTLL--------DGGESQ----ILMITGPNMAGKSTY 630
Query: 211 MRQLGLITILAQ 222
MRQ+ LIT++AQ
Sbjct: 631 MRQVALITLMAQ 642
>gi|375362350|ref|YP_005130389.1| DNA mismatch repair protein mutS [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
gi|371568344|emb|CCF05194.1| DNA mismatch repair protein mutS [Bacillus amyloliquefaciens subsp.
plantarum CAU B946]
Length = 862
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q Y+PN+ ++G +E +LL+TGPNM GKST MRQ+ L++I+AQ+
Sbjct: 583 QEYVPNNCLMGDSRE-------------MLLITGPNMSGKSTYMRQIALLSIMAQI 625
>gi|366053765|ref|ZP_09451487.1| DNA mismatch repair protein MutS [Lactobacillus suebicus KCTC 3549]
Length = 877
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN + N K +LL+TGPNM GKST MRQL L I++QM
Sbjct: 585 GHQEYVPNDVSM-------------NPKTNILLITGPNMSGKSTYMRQLALTVIMSQM 629
>gi|402225420|gb|EJU05481.1| hypothetical protein DACRYDRAFT_74703 [Dacryopinax sp. DJM-731 SS1]
Length = 1011
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 33/94 (35%), Positives = 47/94 (50%), Gaps = 26/94 (27%)
Query: 136 QQGVCVPTFLG------LEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGE 189
QQG C P F+ +E HP + AL S ++PN+ +G G+
Sbjct: 714 QQGYCRPRFVEDDRIDIVEGRHPMVEALMS--------DPFVPNTVTLG---------GD 756
Query: 190 GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G P ++TGPNMGGKS+ +R LI I+AQ+
Sbjct: 757 G---PRSRIITGPNMGGKSSCVRMAALIVIMAQI 787
>gi|423071724|ref|ZP_17060497.1| DNA mismatch repair protein mutS [Streptococcus intermedius F0413]
gi|355363498|gb|EHG11235.1| DNA mismatch repair protein mutS [Streptococcus intermedius F0413]
Length = 852
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + E+V + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQTYIPNSISM---DENV----------NLQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|172037067|ref|YP_001803568.1| DNA mismatch repair protein MutS [Cyanothece sp. ATCC 51142]
gi|354555834|ref|ZP_08975133.1| DNA mismatch repair protein MutS [Cyanothece sp. ATCC 51472]
gi|171698521|gb|ACB51502.1| DNA mismatch repair protein [Cyanothece sp. ATCC 51142]
gi|353552158|gb|EHC21555.1| DNA mismatch repair protein MutS [Cyanothece sp. ATCC 51472]
Length = 884
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 32/89 (35%), Positives = 45/89 (50%), Gaps = 15/89 (16%)
Query: 137 QGVCVPTFLGLEEPHPYISALESLYPC---ATGDQTYIPNSTVIGRCKEDVESGGEGNRK 193
QG C P L I + +P + G ++PNST +GR EG
Sbjct: 608 QGYCRPEIL----DSRLIEIADGRHPVVEQSLGFGLFVPNSTNMGR--------NEGETS 655
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
P +++LTGPN GKS +RQ+GLI ++AQ
Sbjct: 656 PDLIILTGPNASGKSCYLRQVGLIQLMAQ 684
>gi|424788684|ref|ZP_18215434.1| DNA mismatch repair protein MutS [Streptococcus intermedius BA1]
gi|422112464|gb|EKU16251.1| DNA mismatch repair protein MutS [Streptococcus intermedius BA1]
Length = 852
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + E+V + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQTYIPNSISM---DENV----------NLQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|392429508|ref|YP_006470522.1| DNA mismatch repair protein HexA [Streptococcus intermedius JTH08]
gi|419776877|ref|ZP_14302796.1| DNA mismatch repair protein MutS [Streptococcus intermedius SK54]
gi|383845562|gb|EID82965.1| DNA mismatch repair protein MutS [Streptococcus intermedius SK54]
gi|391758657|dbj|BAM24274.1| DNA mismatch repair protein HexA [Streptococcus intermedius JTH08]
Length = 852
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + E+V + L+TGPNM GKST MRQL +I I+AQM
Sbjct: 580 GAQTYIPNSISM---DENV----------NLQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|294055569|ref|YP_003549227.1| DNA mismatch repair protein MutS [Coraliomargarita akajimensis DSM
45221]
gi|293614902|gb|ADE55057.1| DNA mismatch repair protein MutS [Coraliomargarita akajimensis DSM
45221]
Length = 857
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 24/57 (42%), Positives = 35/57 (61%), Gaps = 7/57 (12%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
G ++PN C+ + S G G+ P + L+TGPNM GKST +RQ+ LI ++AQ
Sbjct: 612 GTHAFVPND-----CR--LSSSGIGDDSPQIALITGPNMAGKSTYIRQVALIVLMAQ 661
>gi|220926842|ref|YP_002502144.1| DNA mismatch repair protein MutS [Methylobacterium nodulans ORS
2060]
gi|219951449|gb|ACL61841.1| DNA mismatch repair protein MutS [Methylobacterium nodulans ORS
2060]
Length = 929
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 3/56 (5%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ +I NS + + + SG E + +L++TGPNMGGKST +RQ LI +LAQM
Sbjct: 650 EPFIANSCDLSGSENEARSGREAGQ---ILIVTGPNMGGKSTFLRQNALIAVLAQM 702
>gi|62857961|ref|NP_001016572.1| uncharacterized protein LOC549326 [Xenopus (Silurana) tropicalis]
gi|213625492|gb|AAI70728.1| hypothetical protein LOC549326 [Xenopus (Silurana) tropicalis]
gi|213627117|gb|AAI70758.1| hypothetical protein LOC549326 [Xenopus (Silurana) tropicalis]
Length = 107
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 1/54 (1%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTES 68
PIT + V+ + P+GY VIS+T D DAD+W++ F + TRYLC ++ S
Sbjct: 18 PITGVGVVASRNRAPTGYDVISQTTD-GLDADLWKDGLFKSKVTRYLCFTRVFS 70
>gi|47228957|emb|CAG09472.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1235
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/66 (45%), Positives = 40/66 (60%), Gaps = 8/66 (12%)
Query: 152 PYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGK 207
P++ S +PC T GD +IPN IG C+ E +G+ T +L+TGPNMGGK
Sbjct: 1018 PFLELTGSRHPCVTKTFFGDD-FIPNDIFIG-CRGSGEEEEKGD--ATCVLVTGPNMGGK 1073
Query: 208 STVMRQ 213
ST+MRQ
Sbjct: 1074 STLMRQ 1079
>gi|241202801|ref|YP_002973897.1| DNA mismatch repair protein MutS [Rhizobium leguminosarum bv.
trifolii WSM1325]
gi|240856691|gb|ACS54358.1| DNA mismatch repair protein MutS [Rhizobium leguminosarum bv.
trifolii WSM1325]
Length = 908
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/34 (67%), Positives = 27/34 (79%)
Query: 190 GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G+R + LLTGPNMGGKST +RQ LI+ILAQM
Sbjct: 651 GDRDGAIWLLTGPNMGGKSTFLRQNALISILAQM 684
>gi|116250175|ref|YP_766013.1| DNA mismatch repair protein MutS [Rhizobium leguminosarum bv.
viciae 3841]
gi|189083183|sp|Q1MMA5.1|MUTS_RHIL3 RecName: Full=DNA mismatch repair protein MutS
gi|115254823|emb|CAK05897.1| putative DNA mismatch repair protein [Rhizobium leguminosarum bv.
viciae 3841]
Length = 908
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 23/34 (67%), Positives = 27/34 (79%)
Query: 190 GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G+R + LLTGPNMGGKST +RQ LI+ILAQM
Sbjct: 651 GDRDGAIWLLTGPNMGGKSTFLRQNALISILAQM 684
>gi|261406193|ref|YP_003242434.1| DNA mismatch repair protein MutS [Paenibacillus sp. Y412MC10]
gi|261282656|gb|ACX64627.1| DNA mismatch repair protein MutS [Paenibacillus sp. Y412MC10]
Length = 923
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 40/73 (54%), Gaps = 19/73 (26%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + A+ D ++I N T D+ G ++LL+TGPNM GKST
Sbjct: 580 HPVVEAVMK-------DSSFIANGT-------DLRKDGS-----SILLITGPNMAGKSTY 620
Query: 211 MRQLGLITILAQM 223
MRQ+ LI+ILAQM
Sbjct: 621 MRQVALISILAQM 633
>gi|380033021|ref|YP_004890012.1| DNA mismatch repair protein MutS/HexA [Lactobacillus plantarum
WCFS1]
gi|38258029|sp|Q88UZ7.1|MUTS_LACPL RecName: Full=DNA mismatch repair protein MutS
gi|342242264|emb|CCC79498.1| DNA mismatch repair protein MutS/HexA [Lactobacillus plantarum
WCFS1]
Length = 896
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G+Q+Y+PN+ + + TVLL+TGPNM GKST MRQL L I+AQ+
Sbjct: 585 GNQSYVPNNVTM-------------SPDETVLLITGPNMSGKSTYMRQLALTVIMAQI 629
>gi|343429855|emb|CBQ73427.1| probable DNA mismatch repair protein MSH2 [Sporisorium reilianum
SRZ2]
Length = 950
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 14/68 (20%)
Query: 158 ESLYPC--ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLG 215
E+ +PC D +IPN T + R K + L++TGPNMGGKST +RQ+G
Sbjct: 645 EARHPCLEVMDDVAFIPNDTEMVRGKSEF------------LVITGPNMGGKSTYIRQVG 692
Query: 216 LITILAQM 223
+I ++AQ+
Sbjct: 693 IIALMAQI 700
>gi|300769726|ref|ZP_07079609.1| DNA mismatch repair protein MutS [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308181084|ref|YP_003925212.1| DNA mismatch repair protein MutS [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|418275815|ref|ZP_12891138.1| DNA mismatch repair protein MutS/HexA [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448821800|ref|YP_007414962.1| DNA mismatch repair protein MutS [Lactobacillus plantarum ZJ316]
gi|300492769|gb|EFK27954.1| DNA mismatch repair protein MutS [Lactobacillus plantarum subsp.
plantarum ATCC 14917]
gi|308046575|gb|ADN99118.1| DNA mismatch repair protein MutS [Lactobacillus plantarum subsp.
plantarum ST-III]
gi|376009366|gb|EHS82695.1| DNA mismatch repair protein MutS/HexA [Lactobacillus plantarum
subsp. plantarum NC8]
gi|448275297|gb|AGE39816.1| DNA mismatch repair protein MutS [Lactobacillus plantarum ZJ316]
Length = 896
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G+Q+Y+PN+ + + TVLL+TGPNM GKST MRQL L I+AQ+
Sbjct: 585 GNQSYVPNNVTM-------------SPDETVLLITGPNMSGKSTYMRQLALTVIMAQI 629
>gi|254557089|ref|YP_003063506.1| DNA mismatch repair protein MutS [Lactobacillus plantarum JDM1]
gi|254046016|gb|ACT62809.1| DNA mismatch repair protein [Lactobacillus plantarum JDM1]
Length = 896
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G+Q+Y+PN+ + + TVLL+TGPNM GKST MRQL L I+AQ+
Sbjct: 585 GNQSYVPNNVTM-------------SPDETVLLITGPNMSGKSTYMRQLALTVIMAQI 629
>gi|428201805|ref|YP_007080394.1| DNA mismatch repair protein MutS [Pleurocapsa sp. PCC 7327]
gi|427979237|gb|AFY76837.1| DNA mismatch repair protein MutS [Pleurocapsa sp. PCC 7327]
Length = 892
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/55 (43%), Positives = 40/55 (72%), Gaps = 2/55 (3%)
Query: 170 YIPNSTVIGRCKEDVESGGEGN-RKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++PNST +GR ++ +++G + P +++LTGPN GKS +RQ+GLI ++AQM
Sbjct: 641 FVPNSTQMGR-RDKIKNGEDSALSHPDLIILTGPNASGKSCYLRQVGLIQLMAQM 694
>gi|408411547|ref|ZP_11182693.1| DNA mismatch repair protein mutS [Lactobacillus sp. 66c]
gi|407874286|emb|CCK84499.1| DNA mismatch repair protein mutS [Lactobacillus sp. 66c]
Length = 857
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 35/98 (35%), Positives = 49/98 (50%), Gaps = 26/98 (26%)
Query: 132 KDMYQQGVCVPTFLGLEE------PHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVE 185
+D ++ C PTF +E HP + A+ TG +YIPN + ED
Sbjct: 552 EDAEEKNYCRPTFAKKQEIDIKNGRHPVVEAV-----LETG--SYIPNDLTM---DEDT- 600
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++ L+TGPNM GKST MRQ+ LI I+AQ+
Sbjct: 601 ---------SIYLITGPNMSGKSTYMRQMALIAIMAQV 629
>gi|118355604|ref|XP_001011061.1| MutS domain III family protein [Tetrahymena thermophila]
gi|89292828|gb|EAR90816.1| MutS domain III family protein [Tetrahymena thermophila SB210]
gi|117556985|gb|ABK35678.1| putative mismatch repair protein [Tetrahymena thermophila]
Length = 1257
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 24/71 (33%), Positives = 38/71 (53%), Gaps = 7/71 (9%)
Query: 153 YISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMR 212
Y+ ++ +PC + + NS +I + P V ++TGPNMGGKST++R
Sbjct: 1021 YLKIIQGKHPCVALKKQFQANSIIINTQHNKINY-------PRVQIITGPNMGGKSTILR 1073
Query: 213 QLGLITILAQM 223
LI I+AQ+
Sbjct: 1074 SASLIVIMAQV 1084
>gi|417885084|ref|ZP_12529243.1| DNA mismatch repair protein MutS [Lactobacillus oris F0423]
gi|341596380|gb|EGS38983.1| DNA mismatch repair protein MutS [Lactobacillus oris F0423]
Length = 884
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN DV+ G + + +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 583 GHQEYVPN---------DVQMGDDTD----ILLITGPNMSGKSTYMRQLALTAVMAQM 627
>gi|293377536|ref|ZP_06623731.1| DNA mismatch repair protein MutS [Enterococcus faecium PC4.1]
gi|292643851|gb|EFF61966.1| DNA mismatch repair protein MutS [Enterococcus faecium PC4.1]
Length = 670
Score = 51.2 bits (121), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS + ED +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 376 GHQEYIPNSVEMA---ED----------EMILLITGPNMSGKSTYMRQLALTVLMAQM 420
>gi|312870460|ref|ZP_07730580.1| DNA mismatch repair protein MutS [Lactobacillus oris PB013-T2-3]
gi|311094017|gb|EFQ52341.1| DNA mismatch repair protein MutS [Lactobacillus oris PB013-T2-3]
Length = 884
Score = 51.2 bits (121), Expect = 3e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN DV+ G + + +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 583 GHQEYVPN---------DVQMGDDTD----ILLITGPNMSGKSTYMRQLALTAVMAQM 627
>gi|420145752|ref|ZP_14653206.1| DNA mismatch repair protein MutS [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
gi|398402601|gb|EJN55922.1| DNA mismatch repair protein MutS [Lactobacillus coryniformis subsp.
coryniformis CECT 5711]
Length = 881
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G+Q YIPN + D ++ T+LL+TGPNM GKST MRQL L I+AQ+
Sbjct: 586 GEQKYIPNDVTM-----DADN--------TILLITGPNMSGKSTYMRQLALTVIMAQI 630
>gi|333395619|ref|ZP_08477436.1| DNA mismatch repair protein MutS [Lactobacillus coryniformis subsp.
coryniformis KCTC 3167]
Length = 881
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G+Q YIPN + D ++ T+LL+TGPNM GKST MRQL L I+AQ+
Sbjct: 586 GEQKYIPNDVTM-----DADN--------TILLITGPNMSGKSTYMRQLALTVIMAQI 630
>gi|336391647|ref|ZP_08573046.1| DNA mismatch repair protein MutS [Lactobacillus coryniformis subsp.
torquens KCTC 3535]
Length = 885
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G+Q YIPN + D ++ T+LL+TGPNM GKST MRQL L I+AQ+
Sbjct: 590 GEQKYIPNDVTM-----DADN--------TILLITGPNMSGKSTYMRQLALTVIMAQI 634
>gi|312112898|ref|YP_004010494.1| DNA mismatch repair protein MutS [Rhodomicrobium vannielii ATCC
17100]
gi|311218027|gb|ADP69395.1| DNA mismatch repair protein MutS [Rhodomicrobium vannielii ATCC
17100]
Length = 928
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/41 (56%), Positives = 27/41 (65%)
Query: 183 DVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
D G G R P L++TGPNM GKST +RQ LI +LAQM
Sbjct: 666 DCRLDGAGERAPGFLVVTGPNMAGKSTYLRQNALIAVLAQM 706
>gi|154686121|ref|YP_001421282.1| DNA mismatch repair protein MutS [Bacillus amyloliquefaciens FZB42]
gi|189030693|sp|A7Z4X5.1|MUTS_BACA2 RecName: Full=DNA mismatch repair protein MutS
gi|154351972|gb|ABS74051.1| MutS [Bacillus amyloliquefaciens FZB42]
Length = 862
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 36/56 (64%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q Y+PN+ ++G +E +LL+TGPNM GKST MRQ+ L++I+AQ+
Sbjct: 583 QEYVPNNCLMGDSRE-------------MLLITGPNMSGKSTYMRQIALLSIMAQI 625
>gi|312793677|ref|YP_004026600.1| DNA mismatch repair protein muts [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180817|gb|ADQ40987.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 863
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 37/67 (55%), Gaps = 12/67 (17%)
Query: 166 GDQTYIPN------STVIGRCK---EDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGL 216
GD+ Y N +IGR D E NR VL++TGPNM GKST MRQ+ L
Sbjct: 566 GDRIYFKNGRHPVVEKMIGRGNFIPNDTELDQAENR---VLIITGPNMAGKSTYMRQVAL 622
Query: 217 ITILAQM 223
I I+AQM
Sbjct: 623 IVIMAQM 629
>gi|297617257|ref|YP_003702416.1| DNA mismatch repair protein MutS [Syntrophothermus lipocalidus DSM
12680]
gi|297145094|gb|ADI01851.1| DNA mismatch repair protein MutS [Syntrophothermus lipocalidus DSM
12680]
Length = 876
Score = 51.2 bits (121), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 37/58 (63%), Gaps = 12/58 (20%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G ++++PN T + +++ + ++TGPNMGGKST MRQ+ LITILAQ+
Sbjct: 599 GSESFVPNDTYLD------------DKERRLAIITGPNMGGKSTYMRQVALITILAQV 644
>gi|50554795|ref|XP_504806.1| YALI0F00154p [Yarrowia lipolytica]
gi|49650676|emb|CAG77608.1| YALI0F00154p [Yarrowia lipolytica CLIB122]
Length = 887
Score = 51.2 bits (121), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/65 (40%), Positives = 38/65 (58%), Gaps = 12/65 (18%)
Query: 159 SLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLIT 218
S +PC T+IPN DV G + + L++TGPNMGGKST +RQ+G+I
Sbjct: 602 SRHPCLEAQDTFIPN---------DVHLGQDSKK---FLVITGPNMGGKSTFIRQVGVIV 649
Query: 219 ILAQM 223
++ Q+
Sbjct: 650 LMNQI 654
>gi|410584485|ref|ZP_11321588.1| DNA mismatch repair protein MutS [Thermaerobacter subterraneus DSM
13965]
gi|410504420|gb|EKP93931.1| DNA mismatch repair protein MutS [Thermaerobacter subterraneus DSM
13965]
Length = 1038
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/52 (51%), Positives = 35/52 (67%), Gaps = 4/52 (7%)
Query: 173 NSTVIGR-CKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ T+ GR D++ GE R V+L+TGPNM GKST MRQ+ LI I+AQM
Sbjct: 625 DRTLEGRFVPNDIDLDGEEER---VMLITGPNMAGKSTFMRQVALIVIMAQM 673
>gi|357500449|ref|XP_003620513.1| DNA mismatch repair protein Msh6-2 [Medicago truncatula]
gi|355495528|gb|AES76731.1| DNA mismatch repair protein Msh6-2 [Medicago truncatula]
Length = 1160
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 37/65 (56%), Gaps = 10/65 (15%)
Query: 161 YPCATGD--QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLIT 218
+P A G+ + +PN ++G EG P LLLTGPNMGGKST++R L
Sbjct: 872 HPFALGETGREPVPNDMILGE--------NEGGHHPRTLLLTGPNMGGKSTLLRATCLAV 923
Query: 219 ILAQM 223
I+AQ+
Sbjct: 924 IMAQL 928
>gi|88801798|ref|ZP_01117326.1| DNA mismatch repair protein [Polaribacter irgensii 23-P]
gi|88782456|gb|EAR13633.1| DNA mismatch repair protein [Polaribacter irgensii 23-P]
Length = 870
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/57 (40%), Positives = 34/57 (59%), Gaps = 12/57 (21%)
Query: 167 DQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
DQTY+ N V+ R ++ ++++TGPNM GKS ++RQ LI +LAQM
Sbjct: 597 DQTYVANDVVLNR------------KQQQIIMITGPNMSGKSAILRQTALIVLLAQM 641
>gi|322706947|gb|EFY98526.1| DNA mismatch repair protein msh3 [Metarhizium anisopliae ARSEF 23]
Length = 1101
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 114 DYKPQQSNNTIFSQRNIL----KDMYQQGVCVPTFLGLEEPHPYISALESLYPCA--TGD 167
DY+P + + + + L K Q G PTFL P ++ + +P A T +
Sbjct: 797 DYQPLRDAVSSLASLDCLLSLSKVAAQPGYNKPTFLP-SSSEPTVAITQGRHPIAEHTIE 855
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
YIP ST + + P L+TGPNMGGKS+ +R L LI +LAQ+
Sbjct: 856 SGYIPFSTTLA------------HPSPLAHLITGPNMGGKSSYVRALALIVLLAQI 899
>gi|162312237|ref|XP_001713136.1| DNA mismatch repair protein [Schizosaccharomyces pombe 972h-]
gi|26396556|sp|O74773.2|MSH2_SCHPO RecName: Full=DNA mismatch repair protein msh2
gi|4151103|emb|CAA07342.1| Msh2 [Schizosaccharomyces pombe]
gi|157310425|emb|CAA21156.2| MutS protein homolog 2 [Schizosaccharomyces pombe]
Length = 982
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 28/71 (39%), Positives = 43/71 (60%), Gaps = 14/71 (19%)
Query: 158 ESLYPC--ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLG 215
++ +PC A D +IPN ++E G +L++TGPNMGGKST +RQ+G
Sbjct: 688 QARHPCLEAQDDVKFIPNDV-------NLEHGS-----SELLIITGPNMGGKSTYIRQVG 735
Query: 216 LITILAQMENP 226
+IT++AQ+ P
Sbjct: 736 VITVMAQIGCP 746
>gi|383938101|ref|ZP_09991324.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
SK674]
gi|383714987|gb|EID70970.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
SK674]
Length = 844
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPN+ + ED ++ L+TGPNM GKST MRQL ++ I+AQM
Sbjct: 580 GAQTYIPNTIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMMAIMAQM 624
>gi|379706199|ref|YP_005204658.1| DNA Mismatch repair ATPase (MutS family) [Streptococcus infantarius
subsp. infantarius CJ18]
gi|374682898|gb|AEZ63187.1| DNA Mismatch repair ATPase (MutS family) [Streptococcus infantarius
subsp. infantarius CJ18]
Length = 855
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ GR + L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GTQEYIPNTITFGR-------------NTNIQLITGPNMSGKSTYMRQLALTVIMAQV 624
>gi|256847968|ref|ZP_05553412.1| DNA mismatch repair protein MutS [Lactobacillus coleohominis
101-4-CHN]
gi|256715028|gb|EEU30005.1| DNA mismatch repair protein MutS [Lactobacillus coleohominis
101-4-CHN]
Length = 877
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN DV+ G + + +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 586 GHQEYVPN---------DVQMGQDTD----ILLITGPNMSGKSTYMRQLALSAVMAQM 630
>gi|260558367|ref|ZP_05830563.1| MutS [Enterococcus faecium C68]
gi|35367191|gb|AAN85564.1| MutS [Enterococcus faecium]
gi|260075541|gb|EEW63847.1| MutS [Enterococcus faecium C68]
Length = 881
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L +LAQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLLAQM 631
>gi|430826358|ref|ZP_19444543.1| DNA mismatch repair protein mutS [Enterococcus faecium E0164]
gi|430839373|ref|ZP_19457314.1| DNA mismatch repair protein mutS [Enterococcus faecium E0688]
gi|430858934|ref|ZP_19476552.1| DNA mismatch repair protein mutS [Enterococcus faecium E1552]
gi|430892898|ref|ZP_19484519.1| DNA mismatch repair protein mutS [Enterococcus faecium E1575]
gi|431764986|ref|ZP_19553511.1| DNA mismatch repair protein mutS [Enterococcus faecium E4215]
gi|35367182|gb|AAN85562.1| MutS [Enterococcus faecium]
gi|430445147|gb|ELA54926.1| DNA mismatch repair protein mutS [Enterococcus faecium E0164]
gi|430490831|gb|ELA67327.1| DNA mismatch repair protein mutS [Enterococcus faecium E0688]
gi|430544453|gb|ELA84482.1| DNA mismatch repair protein mutS [Enterococcus faecium E1552]
gi|430555364|gb|ELA94902.1| DNA mismatch repair protein mutS [Enterococcus faecium E1575]
gi|430629626|gb|ELB66021.1| DNA mismatch repair protein mutS [Enterococcus faecium E4215]
Length = 881
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L +LAQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLLAQM 631
>gi|16943737|emb|CAC88689.1| DNA mismatch repair protein [Streptococcus dysgalactiae subsp.
equisimilis]
Length = 164
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS N++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 70 GVQEYIPNSISF-------------NQETSIQLITGPNMSGKSTYMRQLALTVIMAQM 114
>gi|400291073|ref|ZP_10793100.1| DNA mismatch repair protein MutS [Streptococcus ratti FA-1 = DSM
20564]
gi|399921864|gb|EJN94681.1| DNA mismatch repair protein MutS [Streptococcus ratti FA-1 = DSM
20564]
Length = 849
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GSQEYIPNTI-------------HFDQKTSIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|254411238|ref|ZP_05025015.1| DNA mismatch repair protein MutS [Coleofasciculus chthonoplastes
PCC 7420]
gi|196181739|gb|EDX76726.1| DNA mismatch repair protein MutS [Coleofasciculus chthonoplastes
PCC 7420]
Length = 906
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 32/95 (33%), Positives = 51/95 (53%), Gaps = 13/95 (13%)
Query: 136 QQGVCVPTFLGLEEPHPYISALESLYPCATGD---QTYIPNSTVIGRCKEDVESGGE--- 189
+QG C PT + E I+ ++ +P ++PNS +G +E S E
Sbjct: 618 RQGYCRPTMVEGRE----ITIIDGRHPVVEKSLPIGFFVPNSAYLG-WEESTSSSAEKTK 672
Query: 190 --GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
+++P +++LTGPN GKS +RQ+GLI I+AQ
Sbjct: 673 TENHQRPDLIILTGPNASGKSCYLRQVGLIQIMAQ 707
>gi|104774422|ref|YP_619402.1| DNA mismatch repair protein MutS [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
gi|122983907|sp|Q1G938.1|MUTS_LACDA RecName: Full=DNA mismatch repair protein MutS
gi|103423503|emb|CAI98405.1| DNA mismatch repair protein MutS [Lactobacillus delbrueckii subsp.
bulgaricus ATCC 11842]
Length = 856
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 33/98 (33%), Positives = 47/98 (47%), Gaps = 26/98 (26%)
Query: 132 KDMYQQGVCVPTFLGLEE------PHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVE 185
+D ++ C P+F E HP + A+ P + YIPN V+
Sbjct: 552 QDAEEKNYCRPSFSSKNEIAVKNGRHPVVGAV---LPAGS----YIPNDLVM-------- 596
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ ++ L+TGPNM GKST MRQL LI I+AQ+
Sbjct: 597 -----DEDTSIYLITGPNMSGKSTYMRQLALIAIMAQI 629
>gi|74317177|ref|YP_314917.1| DNA mismatch repair protein MutS [Thiobacillus denitrificans ATCC
25259]
gi|90109861|sp|Q3SJP0.1|MUTS_THIDA RecName: Full=DNA mismatch repair protein MutS
gi|74056672|gb|AAZ97112.1| MutS 1 protein [Thiobacillus denitrificans ATCC 25259]
Length = 850
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 18/84 (21%)
Query: 139 VCVPTFLGLEEPHPYISALESLYPCATGD-QTYIPNSTVIGRCKEDVESGGEGNRKPTVL 197
+C P F P I +P + +IPN V+ R ++ +L
Sbjct: 562 LCAPEF----SDDPCIVIRGGRHPVVEAQVEHFIPNDVVLNRTRQ-------------ML 604
Query: 198 LLTGPNMGGKSTVMRQLGLITILA 221
L+TGPNMGGKST MRQ+ LIT++A
Sbjct: 605 LITGPNMGGKSTYMRQVALITLMA 628
>gi|339639233|emb|CCC18468.1| DNA mismatch repair protein mutS [Lactobacillus pentosus IG1]
Length = 910
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G+Q+Y+PN + TVLL+TGPNM GKST MRQL L I+AQ+
Sbjct: 585 GNQSYVPNDVTMAP-------------DETVLLITGPNMSGKSTYMRQLALTVIMAQI 629
>gi|16943731|emb|CAC88686.1| DNA mismatch repair protein [Streptococcus canis]
gi|16943733|emb|CAC88687.1| DNA mismatch repair protein [Streptococcus canis]
Length = 164
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS ++K ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 70 GVQEYIPNSISF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQM 114
>gi|372488883|ref|YP_005028448.1| DNA mismatch repair protein MutS [Dechlorosoma suillum PS]
gi|359355436|gb|AEV26607.1| DNA mismatch repair protein MutS [Dechlorosoma suillum PS]
Length = 867
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 30/60 (50%), Positives = 36/60 (60%), Gaps = 10/60 (16%)
Query: 164 ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
A GD T+IPN +G ED E +LL+TGPNMGGKST MRQ LI +LA +
Sbjct: 597 AQGD-TFIPNDLDLGE-SEDAER--------RLLLITGPNMGGKSTYMRQTALIALLAHV 646
>gi|334882032|emb|CCB82982.1| DNA mismatch repair protein mutS [Lactobacillus pentosus MP-10]
Length = 910
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G+Q+Y+PN + TVLL+TGPNM GKST MRQL L I+AQ+
Sbjct: 585 GNQSYVPNDVTMAP-------------DETVLLITGPNMSGKSTYMRQLALTVIMAQI 629
>gi|335030594|ref|ZP_08524082.1| DNA mismatch repair protein MutS [Streptococcus infantis SK1076]
gi|334265885|gb|EGL84376.1| DNA mismatch repair protein MutS [Streptococcus infantis SK1076]
Length = 843
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + ED ++ L+TGPNM GKST MRQL + I+AQM
Sbjct: 580 GAQTYIPNSI---QMDEDA----------SIQLITGPNMSGKSTYMRQLAITVIMAQM 624
>gi|291240666|ref|XP_002740239.1| PREDICTED: mutS homolog 2-like [Saccoglossus kowalevskii]
Length = 929
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 57/128 (44%), Gaps = 36/128 (28%)
Query: 110 GGVVDYKPQQSNNTIFSQRNILKDMYQQGVCVPTFLGLEEPHPYI------------SAL 157
G VD P Q N I +Q ++L CV P PYI +
Sbjct: 582 AGYVD--PMQLINEILAQLDVLVSF----ACVSA----NAPIPYIRPTLQAKGSGQLKLI 631
Query: 158 ESLYPC--ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLG 215
+S +PC + +IPN + KE ++TGPNMGGKST +RQ+G
Sbjct: 632 QSRHPCLEVQDEVAFIPNDVTFDKEKE------------MFHIITGPNMGGKSTYIRQIG 679
Query: 216 LITILAQM 223
++T++AQ+
Sbjct: 680 VVTLMAQI 687
>gi|383757371|ref|YP_005436356.1| DNA mismatch repair protein MutS [Rubrivivax gelatinosus IL144]
gi|381378040|dbj|BAL94857.1| DNA mismatch repair protein MutS [Rubrivivax gelatinosus IL144]
Length = 868
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 44/92 (47%), Gaps = 23/92 (25%)
Query: 138 GVCVPTFLGLEEPHPYISALESLYPCA------TGDQTYIPNSTVIGRCKEDVESGGEGN 191
G C P F+ P+P I +P TG +I N C+ D
Sbjct: 577 GWCRPEFV----PYPCIEIEAGRHPVVEARLRETGAGPFIAN-----HCRLDA------- 620
Query: 192 RKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
K +L++TGPNMGGKST MRQ+ LI +LA M
Sbjct: 621 -KTKLLVITGPNMGGKSTFMRQVALIVLLAAM 651
>gi|110636355|ref|YP_676563.1| DNA mismatch repair protein MutS [Chelativorans sp. BNC1]
gi|123161485|sp|Q11B27.1|MUTS_MESSB RecName: Full=DNA mismatch repair protein MutS
gi|110287339|gb|ABG65398.1| DNA mismatch repair protein MutS [Chelativorans sp. BNC1]
Length = 881
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
S EG + + LLTGPNMGGKST +RQ LI +LAQM
Sbjct: 617 SPAEGEKAGAIWLLTGPNMGGKSTFLRQNALIAVLAQM 654
>gi|449514801|ref|XP_002190416.2| PREDICTED: DNA mismatch repair protein Msh3 [Taeniopygia guttata]
Length = 963
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I L G+Q Y+PN+T + G+G R V+++TGPNMGGKS+
Sbjct: 691 HPVIDVL-------LGEQDQYVPNTTSLS---------GDGER---VMIITGPNMGGKSS 731
Query: 210 VMRQLGLITILAQM 223
++Q+ LIT++AQ+
Sbjct: 732 YIKQVALITVMAQI 745
>gi|297621573|ref|YP_003709710.1| DNA mismatch repair protein mutS [Waddlia chondrophila WSU 86-1044]
gi|297376874|gb|ADI38704.1| DNA mismatch repair protein mutS [Waddlia chondrophila WSU 86-1044]
Length = 841
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 19/76 (25%)
Query: 148 EEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGK 207
E HP I A+ ++ ++PN T++ E NR +LL+TGPNM GK
Sbjct: 587 EGRHPVIEAVNM-------NEKFVPNDTLLD---------DENNR---LLLITGPNMAGK 627
Query: 208 STVMRQLGLITILAQM 223
ST +RQ+ LITI+AQ+
Sbjct: 628 STYIRQVALITIMAQI 643
>gi|196006291|ref|XP_002113012.1| hypothetical protein TRIADDRAFT_56718 [Trichoplax adhaerens]
gi|190585053|gb|EDV25122.1| hypothetical protein TRIADDRAFT_56718 [Trichoplax adhaerens]
Length = 934
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 34/115 (29%), Positives = 57/115 (49%), Gaps = 18/115 (15%)
Query: 115 YKPQQSNNTIFSQRNILKDMYQQGVCVPT-FLG---LEEPHPYISALESLYPC--ATGDQ 168
Y+P QS + I + +++ P ++ L+ I E+ +PC D
Sbjct: 582 YEPLQSLSRIIAHLDVIVSFAHASTNAPVPYVRPTILDTSDRIIELTEARHPCLEMQDDV 641
Query: 169 TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+IPN + K+D E +++TGPNMGGKST +RQ+G+I ++AQ+
Sbjct: 642 AFIPND--VKFAKDDAE----------FIIITGPNMGGKSTYIRQIGVIVLMAQI 684
>gi|325291779|ref|YP_004277643.1| DNA mismatch repair protein MutS [Agrobacterium sp. H13-3]
gi|325059632|gb|ADY63323.1| DNA mismatch repair protein MutS [Agrobacterium sp. H13-3]
Length = 904
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
S EG + + LLTGPNMGGKST +RQ LI ILAQ+
Sbjct: 640 SAAEGGKNGAIWLLTGPNMGGKSTFLRQNALIAILAQI 677
>gi|269836848|ref|YP_003319076.1| DNA mismatch repair protein MutS [Sphaerobacter thermophilus DSM
20745]
gi|269786111|gb|ACZ38254.1| DNA mismatch repair protein MutS [Sphaerobacter thermophilus DSM
20745]
Length = 893
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 24/41 (58%), Positives = 30/41 (73%), Gaps = 3/41 (7%)
Query: 183 DVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
D GGE P VL++TGPNMGGKST +RQ+ LI +LAQ+
Sbjct: 616 DCRLGGEA---PRVLVVTGPNMGGKSTYLRQVALIVLLAQI 653
>gi|392949281|ref|ZP_10314866.1| DNA mismatch repair protein MutS/HexA [Lactobacillus pentosus KCA1]
gi|392435490|gb|EIW13429.1| DNA mismatch repair protein MutS/HexA [Lactobacillus pentosus KCA1]
Length = 912
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G+Q+Y+PN + TVLL+TGPNM GKST MRQL L I+AQ+
Sbjct: 585 GNQSYVPNDVTMAP-------------DETVLLITGPNMSGKSTYMRQLALTVIMAQI 629
>gi|419766521|ref|ZP_14292714.1| DNA mismatch repair protein MutS [Streptococcus mitis SK579]
gi|383353986|gb|EID31573.1| DNA mismatch repair protein MutS [Streptococcus mitis SK579]
Length = 844
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPN+ + ED+ ++ L+TGPNM GKST MRQL + ++AQM
Sbjct: 580 GAQTYIPNTIQMA---EDI----------SIQLITGPNMSGKSTYMRQLAMTAVMAQM 624
>gi|384246687|gb|EIE20176.1| hypothetical protein COCSUDRAFT_18682, partial [Coccomyxa
subellipsoidea C-169]
Length = 1204
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 32/92 (34%), Positives = 48/92 (52%), Gaps = 16/92 (17%)
Query: 136 QQGVCVPTFLGLEEPHPYISALESLYPCA----TGDQTYIPNSTVIGRCKEDVESGGEGN 191
Q +C P + + +A +P A + T+IPN DVE GG+
Sbjct: 897 QGPMCRPRLVPADRDRQIFTAKGLRHPSAGLHMSAGATFIPN---------DVELGGD-- 945
Query: 192 RKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
K ++LTGPNMGGKST++RQ+ L ++AQ+
Sbjct: 946 -KAPFIILTGPNMGGKSTLLRQVCLAALMAQV 976
>gi|119177119|ref|XP_001240377.1| hypothetical protein CIMG_07540 [Coccidioides immitis RS]
Length = 1181
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 12/55 (21%)
Query: 169 TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
TY+PN D E G +G R LL+TGPNMGGKS+ +RQ+ LI+I+ Q+
Sbjct: 934 TYVPN---------DTELGTDGTR---ALLVTGPNMGGKSSYVRQVALISIMGQI 976
>gi|395791580|ref|ZP_10471036.1| DNA mismatch repair protein mutS [Bartonella alsatica IBS 382]
gi|395407883|gb|EJF74503.1| DNA mismatch repair protein mutS [Bartonella alsatica IBS 382]
Length = 914
Score = 50.8 bits (120), Expect = 4e-04, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 189 EGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
E ++ P + LLTGPNMGGKST +RQ LI I+AQM
Sbjct: 650 ENHQYPAIWLLTGPNMGGKSTFLRQNALIAIMAQM 684
>gi|337294298|emb|CCB92281.1| DNA mismatch repair protein mutS [Waddlia chondrophila 2032/99]
Length = 842
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 30/76 (39%), Positives = 43/76 (56%), Gaps = 19/76 (25%)
Query: 148 EEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGK 207
E HP I A+ ++ ++PN T++ E NR +LL+TGPNM GK
Sbjct: 588 EGRHPVIEAVNM-------NEKFVPNDTLLD---------DENNR---LLLITGPNMAGK 628
Query: 208 STVMRQLGLITILAQM 223
ST +RQ+ LITI+AQ+
Sbjct: 629 STYIRQVALITIMAQI 644
>gi|313574725|emb|CBX26215.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
gi|313574727|emb|CBX26216.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
Length = 439
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
S EG + + LLTGPNMGGKST +RQ LI ILAQ+
Sbjct: 298 SAAEGGKNGAIWLLTGPNMGGKSTFLRQNALIAILAQI 335
>gi|16943729|emb|CAC88685.1| DNA mismatch repair protein [Streptococcus canis]
Length = 164
Score = 50.8 bits (120), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS ++K ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 70 GVQEYIPNSISF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQM 114
>gi|336235959|ref|YP_004588575.1| DNA mismatch repair protein mutS [Geobacillus thermoglucosidasius
C56-YS93]
gi|335362814|gb|AEH48494.1| DNA mismatch repair protein mutS [Geobacillus thermoglucosidasius
C56-YS93]
Length = 864
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 23/105 (21%)
Query: 119 QSNNTIFSQRNILKDMYQQGVCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIG 178
QS T+ +R+ +K + + + G HP + + G QTY+PN +
Sbjct: 547 QSFATVSEERHYVKPQFSEHRELVIQAG---RHPVVEKV-------LGTQTYVPNDCYM- 595
Query: 179 RCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
N++ +LL+TGPNM GKST MRQ+ L I+AQ+
Sbjct: 596 ------------NKERELLLITGPNMSGKSTYMRQIALTAIMAQI 628
>gi|289167055|ref|YP_003445322.1| DNA mismatch repair protein hexA [Streptococcus mitis B6]
gi|288906620|emb|CBJ21454.1| DNA mismatch repair protein hexA [Streptococcus mitis B6]
Length = 844
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPN+ + ED+ ++ L+TGPNM GKST MRQL + ++AQM
Sbjct: 580 GAQTYIPNTIQMA---EDI----------SIQLITGPNMSGKSTYMRQLAMTAVMAQM 624
>gi|389573166|ref|ZP_10163241.1| DNA mismatch repair protein MutS [Bacillus sp. M 2-6]
gi|388426863|gb|EIL84673.1| DNA mismatch repair protein MutS [Bacillus sp. M 2-6]
Length = 858
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q Y+PN +G+ ++ LL+TGPNM GKST MRQ+ LI+ILAQ+
Sbjct: 580 QEYVPNDCQMGKGRQ-------------TLLITGPNMSGKSTYMRQMALISILAQI 622
>gi|423720505|ref|ZP_17694687.1| DNA mismatch repair protein mutS [Geobacillus thermoglucosidans
TNO-09.020]
gi|383366560|gb|EID43850.1| DNA mismatch repair protein mutS [Geobacillus thermoglucosidans
TNO-09.020]
Length = 864
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 23/105 (21%)
Query: 119 QSNNTIFSQRNILKDMYQQGVCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIG 178
QS T+ +R+ +K + + + G HP + + G QTY+PN +
Sbjct: 547 QSFATVSEERHYVKPQFSEHRELVIQAG---RHPVVEKV-------LGTQTYVPNDCYM- 595
Query: 179 RCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
N++ +LL+TGPNM GKST MRQ+ L I+AQ+
Sbjct: 596 ------------NKERELLLITGPNMSGKSTYMRQIALTAIMAQI 628
>gi|329924183|ref|ZP_08279383.1| DNA mismatch repair protein MutS [Paenibacillus sp. HGF5]
gi|328940833|gb|EGG37145.1| DNA mismatch repair protein MutS [Paenibacillus sp. HGF5]
Length = 923
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 19/73 (26%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + A+ D ++I N+T D+ G ++LL+TGPNM GKST
Sbjct: 580 HPVVEAVMK-------DSSFIANAT-------DLRKDGS-----SILLITGPNMAGKSTY 620
Query: 211 MRQLGLITILAQM 223
MRQ+ L++ILAQM
Sbjct: 621 MRQVALLSILAQM 633
>gi|442570230|sp|Q1DQ73.2|MSH3_COCIM RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|392867658|gb|EAS29089.2| DNA mismatch repair protein MSH3 [Coccidioides immitis RS]
Length = 1125
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 12/55 (21%)
Query: 169 TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
TY+PN D E G +G R LL+TGPNMGGKS+ +RQ+ LI+I+ Q+
Sbjct: 878 TYVPN---------DTELGTDGTR---ALLVTGPNMGGKSSYVRQVALISIMGQI 920
>gi|193213813|ref|YP_001995012.1| DNA mismatch repair protein MutS [Chloroherpeton thalassium ATCC
35110]
gi|193087290|gb|ACF12565.1| DNA mismatch repair protein MutS [Chloroherpeton thalassium ATCC
35110]
Length = 880
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 41/72 (56%), Gaps = 19/72 (26%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP LE + P D+ Y+PN C+ DVE+ V ++TGPNM GKS+
Sbjct: 601 HP---VLEKIMPI---DRKYVPND-----CRLDVET--------RVQIITGPNMSGKSSF 641
Query: 211 MRQLGLITILAQ 222
+RQ+GLI +LAQ
Sbjct: 642 LRQVGLIVLLAQ 653
>gi|75909393|ref|YP_323689.1| DNA mismatch repair protein MutS [Anabaena variabilis ATCC 29413]
gi|123608965|sp|Q3M892.1|MUTS_ANAVT RecName: Full=DNA mismatch repair protein MutS
gi|75703118|gb|ABA22794.1| DNA mismatch repair protein MutS [Anabaena variabilis ATCC 29413]
Length = 854
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 51/92 (55%), Gaps = 18/92 (19%)
Query: 137 QGVCVPTFLGLEEPHPYISALESLYPCATGDQT-----YIPNSTVIGRCKEDVESGGEGN 191
QG C P + E I+ ++ +P +Q+ ++PNST +G S E +
Sbjct: 602 QGYCRPEMVNGRE----IAIIDGRHPVV--EQSLPAGFFVPNSTQLG-------SNEETH 648
Query: 192 RKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ P +++LTGPN GKS +RQ+GLI ++AQ+
Sbjct: 649 QLPDLIILTGPNASGKSCYLRQVGLIQLMAQI 680
>gi|417999868|ref|ZP_12640073.1| DNA mismatch repair protein [Lactobacillus casei T71499]
gi|410538424|gb|EKQ12978.1| DNA mismatch repair protein [Lactobacillus casei T71499]
Length = 860
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 13/57 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
G +YIPN ++ N +LL+TGPNM GKST MRQL LI I+AQ
Sbjct: 589 GRDSYIPNDVIM-------------NHDTDMLLITGPNMSGKSTYMRQLALIVIMAQ 632
>gi|417993383|ref|ZP_12633732.1| DNA mismatch repair protein [Lactobacillus casei CRF28]
gi|410531855|gb|EKQ06571.1| DNA mismatch repair protein [Lactobacillus casei CRF28]
Length = 860
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 13/57 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
G +YIPN ++ N +LL+TGPNM GKST MRQL LI I+AQ
Sbjct: 589 GRDSYIPNDVIM-------------NHDTDMLLITGPNMSGKSTYMRQLALIVIMAQ 632
>gi|417981445|ref|ZP_12622113.1| DNA mismatch repair protein [Lactobacillus casei 12A]
gi|410522448|gb|EKP97396.1| DNA mismatch repair protein [Lactobacillus casei 12A]
Length = 860
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 13/57 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
G +YIPN ++ N +LL+TGPNM GKST MRQL LI I+AQ
Sbjct: 589 GRDSYIPNDVIM-------------NHDTDMLLITGPNMSGKSTYMRQLALIVIMAQ 632
>gi|402490588|ref|ZP_10837377.1| DNA mismatch repair protein MutS [Rhizobium sp. CCGE 510]
gi|401810614|gb|EJT02987.1| DNA mismatch repair protein MutS [Rhizobium sp. CCGE 510]
Length = 908
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/38 (63%), Positives = 27/38 (71%)
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
S G+R + LLTGPNMGGKST +RQ LI ILAQM
Sbjct: 647 SPKSGDRDGAIWLLTGPNMGGKSTFLRQNALIAILAQM 684
>gi|126654495|ref|XP_001388418.1| DNA repair protein [Cryptosporidium parvum Iowa II]
gi|126117123|gb|EAZ51223.1| DNA repair protein [Cryptosporidium parvum Iowa II]
Length = 1242
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 15/88 (17%)
Query: 140 CVPTFLGLEEPH--PYISALESLYPCATGDQT-YIPNSTVIGRCKEDVESGGEGNRKPT- 195
C P FL EE + P + ES +P +T YIPN ++ G P
Sbjct: 956 CKPVFLSKEETNGLPMLELKESRHPVVAKLKTNYIPNDILLN-----------GGSSPAP 1004
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
L+TGPNMGGKST++RQ + I+AQ+
Sbjct: 1005 CSLVTGPNMGGKSTILRQTCISVIMAQI 1032
>gi|418011601|ref|ZP_12651355.1| DNA mismatch repair protein [Lactobacillus casei Lc-10]
gi|410551859|gb|EKQ25899.1| DNA mismatch repair protein [Lactobacillus casei Lc-10]
Length = 860
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 13/57 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
G +YIPN ++ N +LL+TGPNM GKST MRQL LI I+AQ
Sbjct: 589 GRDSYIPNDVIM-------------NHDTDMLLITGPNMSGKSTYMRQLALIVIMAQ 632
>gi|418002999|ref|ZP_12643103.1| DNA mismatch repair protein [Lactobacillus casei UCD174]
gi|410543134|gb|EKQ17522.1| DNA mismatch repair protein [Lactobacillus casei UCD174]
Length = 860
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 13/57 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
G +YIPN ++ N +LL+TGPNM GKST MRQL LI I+AQ
Sbjct: 589 GRDSYIPNDVIM-------------NHDTDMLLITGPNMSGKSTYMRQLALIVIMAQ 632
>gi|350266018|ref|YP_004877325.1| DNA mismatch repair protein MutS [Bacillus subtilis subsp.
spizizenii TU-B-10]
gi|349598905|gb|AEP86693.1| DNA mismatch repair protein MutS [Bacillus subtilis subsp.
spizizenii TU-B-10]
Length = 863
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q Y+PN+ ++G NR+ +LL+TGPNM GKST MRQ+ LI+I+AQ+
Sbjct: 587 QEYVPNNCMMG-----------DNRQ--MLLITGPNMSGKSTYMRQIALISIMAQI 629
>gi|335356946|ref|ZP_08548816.1| DNA mismatch repair protein MutS [Lactobacillus animalis KCTC 3501]
Length = 868
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/58 (50%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPN DV+ E + +LL+TGPNM GKST MRQL L I+AQM
Sbjct: 586 GKQSYIPN---------DVKMSSELD----ILLITGPNMSGKSTYMRQLALSVIMAQM 630
>gi|313574657|emb|CBX26181.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
gi|313574659|emb|CBX26182.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
gi|313574663|emb|CBX26184.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
gi|313574671|emb|CBX26188.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
Length = 439
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
S EG + + LLTGPNMGGKST +RQ LI ILAQ+
Sbjct: 298 SAAEGGKNGAIWLLTGPNMGGKSTFLRQNALIAILAQI 335
>gi|302380515|ref|ZP_07268980.1| DNA mismatch repair protein MutS [Finegoldia magna ACS-171-V-Col3]
gi|302311458|gb|EFK93474.1| DNA mismatch repair protein MutS [Finegoldia magna ACS-171-V-Col3]
Length = 856
Score = 50.8 bits (120), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 154 ISALESLYP---CATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
I LES +P + G +I N +IG K D++ L+TGPNM GKST
Sbjct: 571 IDVLESRHPIVELSVGQSEFITNDILIGSGKNDIQ------------LITGPNMSGKSTY 618
Query: 211 MRQLGLITILAQM 223
+RQ+ LI IL Q+
Sbjct: 619 LRQVALICILNQI 631
>gi|239630091|ref|ZP_04673122.1| DNA mismatch repair protein mutS [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|417984263|ref|ZP_12624887.1| DNA mismatch repair protein [Lactobacillus casei 21/1]
gi|417987530|ref|ZP_12628085.1| DNA mismatch repair protein [Lactobacillus casei 32G]
gi|239527703|gb|EEQ66704.1| DNA mismatch repair protein mutS [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|410522850|gb|EKP97788.1| DNA mismatch repair protein [Lactobacillus casei 32G]
gi|410525891|gb|EKQ00786.1| DNA mismatch repair protein [Lactobacillus casei 21/1]
Length = 860
Score = 50.8 bits (120), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 13/57 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
G +YIPN ++ N +LL+TGPNM GKST MRQL LI I+AQ
Sbjct: 589 GRDSYIPNDVIM-------------NHDTDMLLITGPNMSGKSTYMRQLALIVIMAQ 632
>gi|421490293|ref|ZP_15937667.1| DNA mismatch repair protein MutS [Streptococcus anginosus SK1138]
gi|400373698|gb|EJP26626.1| DNA mismatch repair protein MutS [Streptococcus anginosus SK1138]
Length = 853
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 29/56 (51%), Positives = 34/56 (60%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
QTYIPNS + E+V V L+TGPNM GKST MRQL +I I+AQM
Sbjct: 582 QTYIPNSISM---DENV----------NVQLITGPNMSGKSTYMRQLAIIVIMAQM 624
>gi|303233668|ref|ZP_07320322.1| DNA mismatch repair protein MutS [Finegoldia magna BVS033A4]
gi|302495102|gb|EFL54854.1| DNA mismatch repair protein MutS [Finegoldia magna BVS033A4]
Length = 856
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 154 ISALESLYP---CATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
I LES +P + G +I N +IG K D++ L+TGPNM GKST
Sbjct: 571 IDVLESRHPIVELSVGQSEFITNDILIGSGKNDIQ------------LITGPNMSGKSTY 618
Query: 211 MRQLGLITILAQM 223
+RQ+ LI IL Q+
Sbjct: 619 LRQVALICILNQI 631
>gi|443632627|ref|ZP_21116806.1| DNA mismatch repair protein MutS [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
gi|443347450|gb|ELS61508.1| DNA mismatch repair protein MutS [Bacillus subtilis subsp.
inaquosorum KCTC 13429]
Length = 860
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCA---TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
+ +E +P Q Y+PN+ ++G NR+ +LL+TGPNM GKST
Sbjct: 565 VEVIEGRHPVVEKVMDSQEYVPNNCMMG-----------DNRQ--MLLITGPNMSGKSTY 611
Query: 211 MRQLGLITILAQM 223
MRQ+ LI+I+AQ+
Sbjct: 612 MRQIALISIMAQI 624
>gi|418008776|ref|ZP_12648627.1| DNA mismatch repair protein [Lactobacillus casei UW4]
gi|410545732|gb|EKQ20019.1| DNA mismatch repair protein [Lactobacillus casei UW4]
Length = 860
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 13/57 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
G +YIPN ++ N +LL+TGPNM GKST MRQL LI I+AQ
Sbjct: 589 GRDSYIPNDVIM-------------NHDTDMLLITGPNMSGKSTYMRQLALIVIMAQ 632
>gi|424873393|ref|ZP_18297055.1| DNA mismatch repair protein MutS [Rhizobium leguminosarum bv.
viciae WSM1455]
gi|393169094|gb|EJC69141.1| DNA mismatch repair protein MutS [Rhizobium leguminosarum bv.
viciae WSM1455]
Length = 908
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/34 (67%), Positives = 26/34 (76%)
Query: 190 GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G+R + LLTGPNMGGKST +RQ LI ILAQM
Sbjct: 651 GDRDGAIWLLTGPNMGGKSTFLRQNALIAILAQM 684
>gi|424879750|ref|ZP_18303382.1| DNA mismatch repair protein MutS [Rhizobium leguminosarum bv.
trifolii WU95]
gi|392516113|gb|EIW40845.1| DNA mismatch repair protein MutS [Rhizobium leguminosarum bv.
trifolii WU95]
Length = 908
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 23/34 (67%), Positives = 26/34 (76%)
Query: 190 GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G+R + LLTGPNMGGKST +RQ LI ILAQM
Sbjct: 651 GDRDGAIWLLTGPNMGGKSTFLRQNALIAILAQM 684
>gi|332526706|ref|ZP_08402808.1| DNA mismatch repair protein MutS [Rubrivivax benzoatilyticus JA2]
gi|332111109|gb|EGJ11141.1| DNA mismatch repair protein MutS [Rubrivivax benzoatilyticus JA2]
Length = 844
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/92 (36%), Positives = 44/92 (47%), Gaps = 23/92 (25%)
Query: 138 GVCVPTFLGLEEPHPYISALESLYPCA------TGDQTYIPNSTVIGRCKEDVESGGEGN 191
G C P F+ P+P I +P TG +I N C+ D
Sbjct: 553 GWCRPEFV----PYPCIEIEAGRHPVVEARLRETGAGPFIAN-----HCRLDA------- 596
Query: 192 RKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
K +L++TGPNMGGKST MRQ+ LI +LA M
Sbjct: 597 -KTRLLVITGPNMGGKSTFMRQVALIVLLAAM 627
>gi|169824440|ref|YP_001692051.1| DNA mismatch repair protein [Finegoldia magna ATCC 29328]
gi|238687741|sp|B0S1C1.1|MUTS_FINM2 RecName: Full=DNA mismatch repair protein MutS
gi|167831245|dbj|BAG08161.1| DNA mismatch repair protein [Finegoldia magna ATCC 29328]
Length = 856
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 154 ISALESLYP---CATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
I LES +P + G +I N +IG K D++ L+TGPNM GKST
Sbjct: 571 IDVLESRHPIVELSVGQSEFITNDILIGSGKNDIQ------------LITGPNMSGKSTY 618
Query: 211 MRQLGLITILAQM 223
+RQ+ LI IL Q+
Sbjct: 619 LRQVALICILNQI 631
>gi|296330917|ref|ZP_06873392.1| DNA mismatch repair protein MutS [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305674435|ref|YP_003866107.1| DNA mismatch repair protein MutS [Bacillus subtilis subsp.
spizizenii str. W23]
gi|296151922|gb|EFG92796.1| DNA mismatch repair protein MutS [Bacillus subtilis subsp.
spizizenii ATCC 6633]
gi|305412679|gb|ADM37798.1| DNA mismatch repair protein MutS [Bacillus subtilis subsp.
spizizenii str. W23]
Length = 858
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 37/56 (66%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q Y+PN+ ++G NR+ +LL+TGPNM GKST MRQ+ LI+I+AQ+
Sbjct: 582 QEYVPNNCMMG-----------DNRQ--MLLITGPNMSGKSTYMRQIALISIMAQI 624
>gi|297588419|ref|ZP_06947062.1| DNA mismatch repair protein MutS [Finegoldia magna ATCC 53516]
gi|297573792|gb|EFH92513.1| DNA mismatch repair protein MutS [Finegoldia magna ATCC 53516]
Length = 859
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 154 ISALESLYP---CATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
I LES +P + G +I N +IG K D++ L+TGPNM GKST
Sbjct: 571 IDVLESRHPIVELSVGQSEFITNDILIGSGKNDIQ------------LITGPNMSGKSTY 618
Query: 211 MRQLGLITILAQM 223
+RQ+ LI IL Q+
Sbjct: 619 LRQVALICILNQI 631
>gi|414156453|ref|ZP_11412755.1| DNA mismatch repair protein mutS [Streptococcus sp. F0442]
gi|410870100|gb|EKS18059.1| DNA mismatch repair protein mutS [Streptococcus sp. F0442]
Length = 849
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS + ++D++ L+TGPNM GKST MRQL +I ILAQ+
Sbjct: 580 GAQSYIPNSIFMDE-EQDIQ------------LITGPNMSGKSTYMRQLAIIVILAQI 624
>gi|408356790|ref|YP_006845321.1| DNA mismatch repair protein MutS [Amphibacillus xylanus NBRC 15112]
gi|407727561|dbj|BAM47559.1| DNA mismatch repair protein MutS [Amphibacillus xylanus NBRC 15112]
Length = 856
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 44/94 (46%), Gaps = 26/94 (27%)
Query: 136 QQGVCVPTFLG------LEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGE 189
QQG C P ++ HP + + D TY+PN +
Sbjct: 556 QQGYCRPQLTTDGKVEIIKGRHPVVEKV-------MNDTTYVPNDVYL------------ 596
Query: 190 GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++ +LL+TGPNM GKST MRQ+ LI I+AQ+
Sbjct: 597 -DQDNQILLITGPNMSGKSTYMRQVALIVIMAQI 629
>gi|313574677|emb|CBX26191.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
gi|313574679|emb|CBX26192.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
Length = 439
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
S EG + + LLTGPNMGGKST +RQ LI ILAQ+
Sbjct: 298 SAAEGGKNGAIWLLTGPNMGGKSTFLRQNALIAILAQI 335
>gi|1002520|gb|AAB19235.1| MutS [Bacillus subtilis subsp. subtilis str. 168]
Length = 852
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCA---TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
+ +E +P Q Y+PN+ ++G NR+ +LL+TGPNM GKST
Sbjct: 559 VEVIEGRHPVVEKVMDSQEYVPNNCMMG-----------DNRQ--MLLITGPNMSGKSTY 605
Query: 211 MRQLGLITILAQM 223
MRQ+ LI+I+AQ+
Sbjct: 606 MRQIALISIMAQI 618
>gi|384175445|ref|YP_005556830.1| DNA mismatch repair protein MutS [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
gi|349594669|gb|AEP90856.1| DNA mismatch repair protein MutS [Bacillus subtilis subsp. subtilis
str. RO-NN-1]
Length = 858
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCA---TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
+ +E +P Q Y+PN+ ++G NR+ +LL+TGPNM GKST
Sbjct: 565 VEVIEGRHPVVEKVMDSQEYVPNNCMMG-----------DNRQ--MLLITGPNMSGKSTY 611
Query: 211 MRQLGLITILAQM 223
MRQ+ LI+I+AQ+
Sbjct: 612 MRQIALISIMAQI 624
>gi|430758875|ref|YP_007209596.1| DNA mismatch repair protein [Bacillus subtilis subsp. subtilis str.
BSP1]
gi|430023395|gb|AGA24001.1| DNA mismatch repair protein [Bacillus subtilis subsp. subtilis str.
BSP1]
Length = 858
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCA---TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
+ +E +P Q Y+PN+ ++G NR+ +LL+TGPNM GKST
Sbjct: 565 VEVIEGRHPVVEKVMDSQEYVPNNCMMG-----------DNRQ--MLLITGPNMSGKSTY 611
Query: 211 MRQLGLITILAQM 223
MRQ+ LI+I+AQ+
Sbjct: 612 MRQIALISIMAQI 624
>gi|418012708|ref|ZP_12652401.1| DNA mismatch repair protein [Lactobacillus casei Lpc-37]
gi|410556603|gb|EKQ30485.1| DNA mismatch repair protein [Lactobacillus casei Lpc-37]
Length = 860
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 13/57 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
G +YIPN ++ N +LL+TGPNM GKST MRQL LI I+AQ
Sbjct: 589 GRDSYIPNDVIM-------------NHDTDMLLITGPNMSGKSTYMRQLALIVIMAQ 632
>gi|349612127|ref|ZP_08891354.1| DNA mismatch repair protein mutS [Lactobacillus sp. 7_1_47FAA]
gi|348609143|gb|EGY59104.1| DNA mismatch repair protein mutS [Lactobacillus sp. 7_1_47FAA]
Length = 854
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + + S D+ YIPN DV+ + N + L+TGPNM GKST
Sbjct: 577 HPVVEKVMS-------DEEYIPN---------DVKMDEQTN----IFLITGPNMSGKSTY 616
Query: 211 MRQLGLITILAQM 223
MRQL LI I+AQM
Sbjct: 617 MRQLALIIIMAQM 629
>gi|313574669|emb|CBX26187.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
Length = 439
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
S EG + + LLTGPNMGGKST +RQ LI ILAQ+
Sbjct: 298 SAAEGGKNGAIWLLTGPNMGGKSTFLRQNALIAILAQI 335
>gi|451343164|ref|ZP_21912240.1| DNA mismatch repair protein MutS [Eggerthia catenaformis OT 569 =
DSM 20559]
gi|449338160|gb|EMD17312.1| DNA mismatch repair protein MutS [Eggerthia catenaformis OT 569 =
DSM 20559]
Length = 831
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 34/98 (34%), Positives = 46/98 (46%), Gaps = 23/98 (23%)
Query: 126 SQRNILKDMYQQGVCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVE 185
S+ N ++ ++ Q L E HP I + G Q YI N +
Sbjct: 547 SKNNYVRPLFNQS---HQMLIEEGRHPVIEEV-------IGHQNYISNDIKM-------- 588
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
N + +LL+TGPNMGGKST MRQ+ L I+AQM
Sbjct: 589 -----NEEHEILLITGPNMGGKSTFMRQVTLTVIMAQM 621
>gi|354544901|emb|CCE41626.1| hypothetical protein CPAR2_801760 [Candida parapsilosis]
Length = 1244
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/84 (35%), Positives = 42/84 (50%), Gaps = 14/84 (16%)
Query: 140 CVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLL 199
C P F+ + H + E +PC G+ +IPN D+ GG+ +P LL
Sbjct: 949 CRPEFV--QGDHGVLDFKELRHPCFVGNGNFIPN---------DIHLGGD---EPNFGLL 994
Query: 200 TGPNMGGKSTVMRQLGLITILAQM 223
TG N GKST+MR L IL+Q+
Sbjct: 995 TGANAAGKSTIMRTTALAVILSQI 1018
>gi|313574661|emb|CBX26183.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
gi|313574675|emb|CBX26190.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
Length = 439
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
S EG + + LLTGPNMGGKST +RQ LI ILAQ+
Sbjct: 298 SAAEGGKNGAIWLLTGPNMGGKSTFLRQNALIAILAQI 335
>gi|312870746|ref|ZP_07730853.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF 3008A-a]
gi|329919600|ref|ZP_08276589.1| DNA mismatch repair protein MutS [Lactobacillus iners SPIN 1401G]
gi|311093758|gb|EFQ52095.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF 3008A-a]
gi|328937405|gb|EGG33827.1| DNA mismatch repair protein MutS [Lactobacillus iners SPIN 1401G]
Length = 854
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + + S D+ YIPN DV+ + N + L+TGPNM GKST
Sbjct: 577 HPVVEKVMS-------DEEYIPN---------DVKMDEQTN----IFLITGPNMSGKSTY 616
Query: 211 MRQLGLITILAQM 223
MRQL LI I+AQM
Sbjct: 617 MRQLALIIIMAQM 629
>gi|259501313|ref|ZP_05744215.1| DNA mismatch repair protein HexA [Lactobacillus iners DSM 13335]
gi|302190963|ref|ZP_07267217.1| DNA mismatch repair protein MutS [Lactobacillus iners AB-1]
gi|259167283|gb|EEW51778.1| DNA mismatch repair protein HexA [Lactobacillus iners DSM 13335]
Length = 854
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + + S D+ YIPN DV+ + N + L+TGPNM GKST
Sbjct: 577 HPVVEKVMS-------DEEYIPN---------DVKMDEQTN----IFLITGPNMSGKSTY 616
Query: 211 MRQLGLITILAQM 223
MRQL LI I+AQM
Sbjct: 617 MRQLALIIIMAQM 629
>gi|386758427|ref|YP_006231643.1| DNA mismatch repair protein MutS [Bacillus sp. JS]
gi|384931709|gb|AFI28387.1| DNA mismatch repair protein MutS [Bacillus sp. JS]
Length = 863
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCA---TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
+ +E +P Q Y+PN+ ++G NR+ +LL+TGPNM GKST
Sbjct: 565 VEVIEGRHPVVEKVMDSQEYVPNNCMMG-----------DNRQ--MLLITGPNMSGKSTY 611
Query: 211 MRQLGLITILAQM 223
MRQ+ LI+I+AQ+
Sbjct: 612 MRQIALISIMAQI 624
>gi|309809651|ref|ZP_07703507.1| DNA mismatch repair protein MutS [Lactobacillus iners SPIN
2503V10-D]
gi|308170011|gb|EFO72048.1| DNA mismatch repair protein MutS [Lactobacillus iners SPIN
2503V10-D]
Length = 854
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + + S D+ YIPN DV+ + N + L+TGPNM GKST
Sbjct: 577 HPVVEKVMS-------DEEYIPN---------DVKMDEQTN----IFLITGPNMSGKSTY 616
Query: 211 MRQLGLITILAQM 223
MRQL LI I+AQM
Sbjct: 617 MRQLALIIIMAQM 629
>gi|116333843|ref|YP_795370.1| DNA mismatch repair protein MutS [Lactobacillus brevis ATCC 367]
gi|122269470|sp|Q03R33.1|MUTS_LACBA RecName: Full=DNA mismatch repair protein MutS
gi|116099190|gb|ABJ64339.1| DNA mismatch repair protein MutS [Lactobacillus brevis ATCC 367]
Length = 892
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+Y+PN + + + +LL+TGPNM GKST MRQL L I+AQM
Sbjct: 585 GRQSYVPNDVTM-------------DDQTNILLITGPNMSGKSTYMRQLALTVIMAQM 629
>gi|322701080|gb|EFY92831.1| DNA mismatch repair protein msh3 [Metarhizium acridum CQMa 102]
Length = 1098
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 38/116 (32%), Positives = 55/116 (47%), Gaps = 19/116 (16%)
Query: 114 DYKPQQSNNTIFSQRNIL----KDMYQQGVCVPTFLGLEEPHPYISALESLYPCA--TGD 167
DY+P + + + + L K Q G PTFL P ++ + +P A T +
Sbjct: 794 DYQPLRDAVSSLASLDCLLSLSKVAAQPGYHRPTFLP-SSSEPTVAITQGRHPIAEHTIE 852
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
YIP ST + + P L+TGPNMGGKS+ +R L LI +LAQ+
Sbjct: 853 TGYIPFSTTLA------------HPSPLAHLITGPNMGGKSSYVRALALIVLLAQI 896
>gi|313574665|emb|CBX26185.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
gi|313574667|emb|CBX26186.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
gi|313574683|emb|CBX26194.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
Length = 439
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
S EG + + LLTGPNMGGKST +RQ LI ILAQ+
Sbjct: 298 SAAEGGKNGAIWLLTGPNMGGKSTFLRQNALIAILAQI 335
>gi|418005962|ref|ZP_12645931.1| DNA mismatch repair protein [Lactobacillus casei UW1]
gi|410544982|gb|EKQ19290.1| DNA mismatch repair protein [Lactobacillus casei UW1]
Length = 860
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 13/57 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
G +YIPN ++ N +LL+TGPNM GKST MRQL LI I+AQ
Sbjct: 589 GRDSYIPNDVIM-------------NHDTDMLLITGPNMSGKSTYMRQLALIVIMAQ 632
>gi|418033149|ref|ZP_12671626.1| DNA mismatch repair protein [Bacillus subtilis subsp. subtilis str.
SC-8]
gi|351469297|gb|EHA29473.1| DNA mismatch repair protein [Bacillus subtilis subsp. subtilis str.
SC-8]
Length = 858
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCA---TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
+ +E +P Q Y+PN+ ++G NR+ +LL+TGPNM GKST
Sbjct: 565 VEVIEGRHPVVEKVMDSQEYVPNNCMMG-----------DNRQ--MLLITGPNMSGKSTY 611
Query: 211 MRQLGLITILAQM 223
MRQ+ LI+I+AQ+
Sbjct: 612 MRQIALISIMAQI 624
>gi|428279302|ref|YP_005561037.1| DNA mismatch repair protein [Bacillus subtilis subsp. natto
BEST195]
gi|291484259|dbj|BAI85334.1| DNA mismatch repair protein [Bacillus subtilis subsp. natto
BEST195]
Length = 858
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCA---TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
+ +E +P Q Y+PN+ ++G NR+ +LL+TGPNM GKST
Sbjct: 565 VEVIEGRHPVVEKVMDSQEYVPNNCMMG-----------DNRQ--MLLITGPNMSGKSTY 611
Query: 211 MRQLGLITILAQM 223
MRQ+ LI+I+AQ+
Sbjct: 612 MRQIALISIMAQI 624
>gi|227533756|ref|ZP_03963805.1| DNA mismatch repair protein mutS [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|385824105|ref|YP_005860447.1| DNA mismatch repair protein mutS [Lactobacillus casei BD-II]
gi|409998037|ref|YP_006752438.1| DNA mismatch repair protein MutS [Lactobacillus casei W56]
gi|417990532|ref|ZP_12631008.1| DNA mismatch repair protein [Lactobacillus casei A2-362]
gi|227188592|gb|EEI68659.1| DNA mismatch repair protein mutS [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|327386432|gb|AEA57906.1| DNA mismatch repair protein mutS [Lactobacillus casei BD-II]
gi|406359049|emb|CCK23319.1| DNA mismatch repair protein MutS [Lactobacillus casei W56]
gi|410534682|gb|EKQ09322.1| DNA mismatch repair protein [Lactobacillus casei A2-362]
Length = 860
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 13/57 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
G +YIPN ++ N +LL+TGPNM GKST MRQL LI I+AQ
Sbjct: 589 GRDSYIPNDVIM-------------NHDTDMLLITGPNMSGKSTYMRQLALIVIMAQ 632
>gi|116495688|ref|YP_807422.1| DNA mismatch repair protein MutS [Lactobacillus casei ATCC 334]
gi|301067238|ref|YP_003789261.1| mismatch repair ATPase (mutS family) [Lactobacillus casei str.
Zhang]
gi|122262910|sp|Q035Z2.1|MUTS_LACC3 RecName: Full=DNA mismatch repair protein MutS
gi|116105838|gb|ABJ70980.1| DNA mismatch repair protein MutS [Lactobacillus casei ATCC 334]
gi|300439645|gb|ADK19411.1| Mismatch repair ATPase (MutS family) [Lactobacillus casei str.
Zhang]
Length = 857
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 13/57 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
G +YIPN ++ N +LL+TGPNM GKST MRQL LI I+AQ
Sbjct: 586 GRDSYIPNDVIM-------------NHDTDMLLITGPNMSGKSTYMRQLALIVIMAQ 629
>gi|67611475|ref|XP_667158.1| DNA repair protein [Cryptosporidium hominis TU502]
gi|54658270|gb|EAL36933.1| DNA repair protein [Cryptosporidium hominis]
Length = 1242
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/88 (37%), Positives = 45/88 (51%), Gaps = 15/88 (17%)
Query: 140 CVPTFLGLEEPH--PYISALESLYPCATGDQT-YIPNSTVIGRCKEDVESGGEGNRKPT- 195
C P FL EE + P + ES +P +T YIPN ++ G P
Sbjct: 956 CKPVFLSKEETNGLPMLELKESRHPVVAKLKTNYIPNDILLN-----------GGSSPAP 1004
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
L+TGPNMGGKST++RQ + I+AQ+
Sbjct: 1005 CSLVTGPNMGGKSTILRQTCISVIMAQI 1032
>gi|395511357|ref|XP_003759926.1| PREDICTED: DNA mismatch repair protein Msh3 [Sarcophilus harrisii]
Length = 1038
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I L G+Q Y+PNST + G+ R V+++TGPNMGGKS+
Sbjct: 772 HPVIDVL-------LGEQDQYVPNSTYLS---------GDSER---VMIITGPNMGGKSS 812
Query: 210 VMRQLGLITILAQM 223
++Q+ LITI+AQ+
Sbjct: 813 YIKQVALITIMAQI 826
>gi|221309579|ref|ZP_03591426.1| DNA mismatch repair protein [Bacillus subtilis subsp. subtilis str.
168]
gi|221313903|ref|ZP_03595708.1| DNA mismatch repair protein [Bacillus subtilis subsp. subtilis str.
NCIB 3610]
gi|221318826|ref|ZP_03600120.1| DNA mismatch repair protein [Bacillus subtilis subsp. subtilis str.
JH642]
gi|221323098|ref|ZP_03604392.1| DNA mismatch repair protein [Bacillus subtilis subsp. subtilis str.
SMY]
gi|255767391|ref|NP_389586.2| DNA mismatch repair protein MutS [Bacillus subtilis subsp. subtilis
str. 168]
gi|321315470|ref|YP_004207757.1| DNA mismatch repair protein MutS [Bacillus subtilis BSn5]
gi|402775947|ref|YP_006629891.1| DNA mismatch repair recognition factor [Bacillus subtilis QB928]
gi|452913973|ref|ZP_21962600.1| DNA mismatch repair protein MutS [Bacillus subtilis MB73/2]
gi|239938876|sp|P49849.3|MUTS_BACSU RecName: Full=DNA mismatch repair protein MutS
gi|225185018|emb|CAB13577.2| DNA mismatch repair recognition factor [Bacillus subtilis subsp.
subtilis str. 168]
gi|320021744|gb|ADV96730.1| DNA mismatch repair protein MutS [Bacillus subtilis BSn5]
gi|402481128|gb|AFQ57637.1| DNA mismatch repair recognition factor [Bacillus subtilis QB928]
gi|407959110|dbj|BAM52350.1| DNA mismatch repair protein MutS [Synechocystis sp. PCC 6803]
gi|407964687|dbj|BAM57926.1| DNA mismatch repair protein MutS [Bacillus subtilis BEST7003]
gi|452116393|gb|EME06788.1| DNA mismatch repair protein MutS [Bacillus subtilis MB73/2]
Length = 858
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCA---TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
+ +E +P Q Y+PN+ ++G NR+ +LL+TGPNM GKST
Sbjct: 565 VEVIEGRHPVVEKVMDSQEYVPNNCMMG-----------DNRQ--MLLITGPNMSGKSTY 611
Query: 211 MRQLGLITILAQM 223
MRQ+ LI+I+AQ+
Sbjct: 612 MRQIALISIMAQI 624
>gi|197122562|ref|YP_002134513.1| DNA mismatch repair protein MutS [Anaeromyxobacter sp. K]
gi|238689851|sp|B4UCY7.1|MUTS_ANASK RecName: Full=DNA mismatch repair protein MutS
gi|196172411|gb|ACG73384.1| DNA mismatch repair protein MutS [Anaeromyxobacter sp. K]
Length = 882
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 28/73 (38%), Positives = 41/73 (56%), Gaps = 10/73 (13%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + A+ P A Y+PN ++ ++ E G +L++TGPNM GKSTV
Sbjct: 587 HPVVEAVLPDGPAA-----YVPNDVLVAS-RDAPECAEHG----ALLVITGPNMAGKSTV 636
Query: 211 MRQLGLITILAQM 223
MR+ L+ +LAQM
Sbjct: 637 MREAALVVLLAQM 649
>gi|449094390|ref|YP_007426881.1| DNA mismatch repair protein [Bacillus subtilis XF-1]
gi|449028305|gb|AGE63544.1| DNA mismatch repair protein [Bacillus subtilis XF-1]
Length = 858
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 42/73 (57%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCA---TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
+ +E +P Q Y+PN+ ++G NR+ +LL+TGPNM GKST
Sbjct: 565 VEVIEGRHPVVEKVMDSQEYVPNNCMMG-----------DNRQ--MLLITGPNMSGKSTY 611
Query: 211 MRQLGLITILAQM 223
MRQ+ LI+I+AQ+
Sbjct: 612 MRQIALISIMAQI 624
>gi|300024975|ref|YP_003757586.1| DNA mismatch repair protein MutS [Hyphomicrobium denitrificans ATCC
51888]
gi|299526796|gb|ADJ25265.1| DNA mismatch repair protein MutS [Hyphomicrobium denitrificans ATCC
51888]
Length = 946
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 24/59 (40%), Positives = 33/59 (55%)
Query: 165 TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+G +I N V+G + S + L+TGPNM GKST +RQ LIT++AQM
Sbjct: 655 SGAPAFIENDCVLGSAALETPSDAARTADARIWLVTGPNMAGKSTFLRQNALITVMAQM 713
>gi|417997028|ref|ZP_12637295.1| DNA mismatch repair protein [Lactobacillus casei M36]
gi|410533734|gb|EKQ08400.1| DNA mismatch repair protein [Lactobacillus casei M36]
Length = 860
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 13/57 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
G +YIPN ++ N +LL+TGPNM GKST MRQL LI I+AQ
Sbjct: 589 GRDSYIPNDVIM-------------NHDTDMLLITGPNMSGKSTYMRQLALIVIMAQ 632
>gi|313574673|emb|CBX26189.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
Length = 439
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
S EG + + LLTGPNMGGKST +RQ LI ILAQ+
Sbjct: 298 SAAEGGKNGAIWLLTGPNMGGKSTFLRQNALIAILAQI 335
>gi|312111577|ref|YP_003989893.1| DNA mismatch repair protein MutS [Geobacillus sp. Y4.1MC1]
gi|311216678|gb|ADP75282.1| DNA mismatch repair protein MutS [Geobacillus sp. Y4.1MC1]
Length = 864
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 33/105 (31%), Positives = 51/105 (48%), Gaps = 23/105 (21%)
Query: 119 QSNNTIFSQRNILKDMYQQGVCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIG 178
QS T+ +R+ +K + + + G HP + + G QTY+PN +
Sbjct: 547 QSFATVSEERHYVKPQFSEHRELIIQAG---RHPVVEKV-------LGTQTYVPNDCYM- 595
Query: 179 RCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
N++ +LL+TGPNM GKST MRQ+ L I+AQ+
Sbjct: 596 ------------NKERELLLITGPNMSGKSTYMRQIALTAIMAQI 628
>gi|191639175|ref|YP_001988341.1| DNA mismatch repair protein MutS [Lactobacillus casei BL23]
gi|385820920|ref|YP_005857307.1| DNA mismatch repair protein mutS [Lactobacillus casei LC2W]
gi|238693005|sp|B3W9W4.1|MUTS_LACCB RecName: Full=DNA mismatch repair protein MutS
gi|190713477|emb|CAQ67483.1| DNA mismatch repair protein mutS [Lactobacillus casei BL23]
gi|327383247|gb|AEA54723.1| DNA mismatch repair protein mutS [Lactobacillus casei LC2W]
Length = 857
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 32/57 (56%), Gaps = 13/57 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
G +YIPN ++ N +LL+TGPNM GKST MRQL LI I+AQ
Sbjct: 586 GRDSYIPNDVIM-------------NHDTDMLLITGPNMSGKSTYMRQLALIVIMAQ 629
>gi|398396998|ref|XP_003851957.1| hypothetical protein MYCGRDRAFT_72798 [Zymoseptoria tritici IPO323]
gi|339471837|gb|EGP86933.1| hypothetical protein MYCGRDRAFT_72798 [Zymoseptoria tritici IPO323]
Length = 936
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 41/68 (60%), Gaps = 14/68 (20%)
Query: 158 ESLYPC--ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLG 215
E+ +PC D ++IPN + R ED + LL+TGPNMGGKST +RQ+G
Sbjct: 622 EARHPCLEMQDDVSFIPNDVSMTR--ED----------SSFLLITGPNMGGKSTYIRQIG 669
Query: 216 LITILAQM 223
+I ++AQ+
Sbjct: 670 VIALMAQV 677
>gi|407979366|ref|ZP_11160182.1| DNA mismatch repair protein MutS [Bacillus sp. HYC-10]
gi|407413973|gb|EKF35644.1| DNA mismatch repair protein MutS [Bacillus sp. HYC-10]
Length = 858
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q Y+PN +G+ ++ LL+TGPNM GKST MRQ+ LI+ILAQ+
Sbjct: 580 QEYVPNDCHMGKGRQ-------------TLLITGPNMSGKSTYMRQMALISILAQI 622
>gi|401402358|ref|XP_003881229.1| DNA mismatch repair protein mutS, related [Neospora caninum
Liverpool]
gi|325115641|emb|CBZ51196.1| DNA mismatch repair protein mutS, related [Neospora caninum
Liverpool]
Length = 1487
Score = 50.4 bits (119), Expect = 5e-04, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 47/87 (54%), Gaps = 11/87 (12%)
Query: 139 VCVPTFLGLEEPHPYISALESL-YPCA-TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTV 196
+C PT L + P I AL + +P A T ++PN DV +++
Sbjct: 1179 MCRPTILEARDDEPPILALTNCRHPVAETLMDNFVPN---------DVYLNCGPHQEKRT 1229
Query: 197 LLLTGPNMGGKSTVMRQLGLITILAQM 223
LLLTGPNMGGKST++RQ L ++AQ+
Sbjct: 1230 LLLTGPNMGGKSTLLRQAALCVVMAQI 1256
>gi|239826703|ref|YP_002949327.1| DNA mismatch repair protein MutS [Geobacillus sp. WCH70]
gi|259511169|sp|C5D9H5.1|MUTS_GEOSW RecName: Full=DNA mismatch repair protein MutS
gi|239806996|gb|ACS24061.1| DNA mismatch repair protein MutS [Geobacillus sp. WCH70]
Length = 860
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTY+PN + + +E +LL+TGPNM GKST MRQ+ L I+AQ+
Sbjct: 584 GAQTYVPNDCYMNKERE-------------LLLITGPNMSGKSTYMRQIALTVIMAQI 628
>gi|417925957|ref|ZP_12569370.1| DNA mismatch repair protein MutS [Finegoldia magna
SY403409CC001050417]
gi|341590559|gb|EGS33797.1| DNA mismatch repair protein MutS [Finegoldia magna
SY403409CC001050417]
Length = 733
Score = 50.4 bits (119), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 154 ISALESLYP---CATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
I LES +P + G +I N +IG K D++ L+TGPNM GKST
Sbjct: 571 IDVLESRHPIVELSVGQSEFITNDILIGSGKNDIQ------------LITGPNMSGKSTY 618
Query: 211 MRQLGLITILAQM 223
+RQ+ LI IL Q+
Sbjct: 619 LRQVALICILNQI 631
>gi|335281014|ref|XP_003122219.2| PREDICTED: multivesicular body subunit 12B-like [Sus scrofa]
Length = 154
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 15 PITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTES 68
PIT + V+ + P+GY V+++T D DAD+W++ F + TRYLC +++ S
Sbjct: 50 PITGVGVVASRNRAPTGYDVVAQTAD-GVDADLWKDGLFKSKVTRYLCFTRSFS 102
>gi|317121911|ref|YP_004101914.1| DNA mismatch repair protein MutS [Thermaerobacter marianensis DSM
12885]
gi|315591891|gb|ADU51187.1| DNA mismatch repair protein MutS [Thermaerobacter marianensis DSM
12885]
Length = 1087
Score = 50.4 bits (119), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 12/54 (22%)
Query: 170 YIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++PN DV+ G+ R V+L+TGPNM GKST MRQ+ LI I+AQM
Sbjct: 716 FVPN---------DVDLDGQDER---VMLITGPNMAGKSTFMRQVALIVIMAQM 757
>gi|430813559|emb|CCJ29106.1| unnamed protein product [Pneumocystis jirovecii]
Length = 320
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 38/65 (58%), Gaps = 12/65 (18%)
Query: 161 YPCATGDQT--YIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLIT 218
+PC + + ++PNS +G G N PT+ LLTGPNM GKST++RQ +
Sbjct: 49 HPCVVQNTSSCFVPNSIKLG--------GSRNN--PTIALLTGPNMAGKSTLLRQTCIAV 98
Query: 219 ILAQM 223
ILAQ+
Sbjct: 99 ILAQL 103
>gi|366090361|ref|ZP_09456727.1| DNA mismatch repair protein MutS [Lactobacillus acidipiscis KCTC
13900]
Length = 878
Score = 50.4 bits (119), Expect = 6e-04, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 36/58 (62%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+Y+PN+ + +D+ T+LL+TGPNM GKST MRQL L I+AQ+
Sbjct: 585 GKQSYVPNNISMA---QDL----------TILLITGPNMSGKSTYMRQLALTVIMAQL 629
>gi|158939810|gb|ABW84197.1| DNA mismatch repair enzyme [Streptococcus dysgalactiae subsp.
equisimilis]
gi|158939812|gb|ABW84198.1| DNA mismatch repair enzyme [Streptococcus dysgalactiae subsp.
equisimilis]
gi|209486177|gb|ACI48544.1| DNA mismatch repair protein, partial [Streptococcus dysgalactiae
subsp. equisimilis]
Length = 135
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS N++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 57 GVQEYIPNSISF-------------NQETSIQLITGPNMSGKSTYMRQLALTVIMAQM 101
>gi|354806621|ref|ZP_09040102.1| DNA mismatch repair protein MutS [Lactobacillus curvatus CRL 705]
gi|354514805|gb|EHE86771.1| DNA mismatch repair protein MutS [Lactobacillus curvatus CRL 705]
Length = 861
Score = 50.4 bits (119), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ +G + +LL+TGPNM GKST MRQL L I+AQM
Sbjct: 587 GRQKYIPNAVQMGTDTD-------------MLLITGPNMSGKSTYMRQLALTVIMAQM 631
>gi|421276331|ref|ZP_15727154.1| DNA mismatch repair protein MutS [Streptococcus mitis SPAR10]
gi|395878284|gb|EJG89351.1| DNA mismatch repair protein MutS [Streptococcus mitis SPAR10]
Length = 844
Score = 50.4 bits (119), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + ED ++ L+TGPNM GKST MRQL + ++AQM
Sbjct: 580 GAQTYIPNSI---QMDEDT----------SIQLITGPNMSGKSTYMRQLAITAVMAQM 624
>gi|322388728|ref|ZP_08062325.1| DNA mismatch repair protein HexA [Streptococcus infantis ATCC
700779]
gi|419844218|ref|ZP_14367517.1| DNA mismatch repair protein MutS [Streptococcus infantis ATCC
700779]
gi|321140347|gb|EFX35855.1| DNA mismatch repair protein HexA [Streptococcus infantis ATCC
700779]
gi|385702104|gb|EIG39255.1| DNA mismatch repair protein MutS [Streptococcus infantis ATCC
700779]
Length = 844
Score = 50.4 bits (119), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + ED ++ L+TGPNM GKST MRQL + ++AQM
Sbjct: 580 GAQTYIPNSI---QMDEDT----------SIQLITGPNMSGKSTYMRQLAITAVMAQM 624
>gi|410667733|ref|YP_006920104.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM
12270]
gi|409105480|gb|AFV11605.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM
12270]
Length = 881
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 30/72 (41%), Positives = 42/72 (58%), Gaps = 19/72 (26%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP LE L P + +++PN D+E G + +R +L+LTGPNM GKST
Sbjct: 592 HP---VLEQLLP----EGSFVPN---------DLEIGEDADR---ILILTGPNMAGKSTY 632
Query: 211 MRQLGLITILAQ 222
MRQ+ LI ++AQ
Sbjct: 633 MRQMALIVLMAQ 644
>gi|227529690|ref|ZP_03959739.1| DNA mismatch repair protein MutS [Lactobacillus vaginalis ATCC
49540]
gi|227350480|gb|EEJ40771.1| DNA mismatch repair protein MutS [Lactobacillus vaginalis ATCC
49540]
Length = 877
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 24/58 (41%), Positives = 32/58 (55%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN ++ + +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 583 GHQEYVPNDVMMDESTD-------------ILLITGPNMSGKSTYMRQLALTAVMAQM 627
>gi|209486175|gb|ACI48543.1| DNA mismatch repair protein, partial [Streptococcus dysgalactiae
subsp. equisimilis]
Length = 135
Score = 50.4 bits (119), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS N++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 57 GVQEYIPNSISF-------------NQETSIQLITGPNMSGKSTYMRQLALTVIMAQM 101
>gi|430834798|ref|ZP_19452800.1| DNA mismatch repair protein mutS [Enterococcus faecium E0679]
gi|430484867|gb|ELA61814.1| DNA mismatch repair protein mutS [Enterococcus faecium E0679]
Length = 881
Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|257885710|ref|ZP_05665363.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,501]
gi|257821566|gb|EEV48696.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,501]
Length = 881
Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|444226995|gb|AGD88357.1| DNA mismatch repair protein, partial [Streptococcus canis]
Length = 135
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS ++K ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 57 GVQEYIPNSISF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQM 101
>gi|209486179|gb|ACI48545.1| DNA mismatch repair protein, partial [Streptococcus dysgalactiae
subsp. equisimilis]
Length = 135
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS N++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 57 GVQEYIPNSISF-------------NQETSIQLITGPNMSGKSTYMRQLALTVIMAQM 101
>gi|417850302|ref|ZP_12496212.1| DNA mismatch repair protein MutS [Streptococcus mitis SK1080]
gi|339452886|gb|EGP65506.1| DNA mismatch repair protein MutS [Streptococcus mitis SK1080]
Length = 844
Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPN+ + ED ++ L+TGPNM GKST MRQL + I+AQM
Sbjct: 580 GAQTYIPNTIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAIMAQM 624
>gi|430843136|ref|ZP_19461037.1| DNA mismatch repair protein mutS [Enterococcus faecium E1050]
gi|430497885|gb|ELA73902.1| DNA mismatch repair protein mutS [Enterococcus faecium E1050]
Length = 881
Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|417846878|ref|ZP_12492862.1| DNA mismatch repair protein MutS [Streptococcus mitis SK1073]
gi|339457998|gb|EGP70551.1| DNA mismatch repair protein MutS [Streptococcus mitis SK1073]
Length = 844
Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPN+ + ED ++ L+TGPNM GKST MRQL + I+AQM
Sbjct: 580 GAQTYIPNTIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAIMAQM 624
>gi|307707759|ref|ZP_07644238.1| DNA mismatch repair protein MutS [Streptococcus mitis NCTC 12261]
gi|307616257|gb|EFN95451.1| DNA mismatch repair protein MutS [Streptococcus mitis NCTC 12261]
Length = 844
Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPN+ + ED ++ L+TGPNM GKST MRQL + I+AQM
Sbjct: 580 GAQTYIPNTIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAIMAQM 624
>gi|293567847|ref|ZP_06679188.1| DNA mismatch repair protein MutS [Enterococcus faecium E1071]
gi|294619660|ref|ZP_06699078.1| DNA mismatch repair protein MutS [Enterococcus faecium E1679]
gi|406579254|ref|ZP_11054486.1| DNA mismatch repair protein MutS [Enterococcus sp. GMD4E]
gi|406581627|ref|ZP_11056764.1| DNA mismatch repair protein MutS [Enterococcus sp. GMD3E]
gi|406584416|ref|ZP_11059447.1| DNA mismatch repair protein MutS [Enterococcus sp. GMD2E]
gi|406589917|ref|ZP_11064331.1| DNA mismatch repair protein MutS [Enterococcus sp. GMD1E]
gi|410938032|ref|ZP_11369890.1| DNA mismatch repair protein MutS [Enterococcus sp. GMD5E]
gi|424779752|ref|ZP_18206649.1| DNA mismatch repair protein MutS [Enterococcus faecium V689]
gi|424964630|ref|ZP_18378706.1| DNA mismatch repair protein MutS [Enterococcus faecium P1190]
gi|424972028|ref|ZP_18385422.1| DNA mismatch repair protein MutS [Enterococcus faecium P1139]
gi|424977413|ref|ZP_18390428.1| DNA mismatch repair protein MutS [Enterococcus faecium P1123]
gi|425038972|ref|ZP_18443548.1| DNA mismatch repair protein MutS [Enterococcus faecium 513]
gi|425061613|ref|ZP_18464828.1| DNA mismatch repair protein MutS [Enterococcus faecium 503]
gi|427397019|ref|ZP_18889645.1| DNA mismatch repair protein mutS [Enterococcus durans FB129-CNAB-4]
gi|430861346|ref|ZP_19478903.1| DNA mismatch repair protein mutS [Enterococcus faecium E1573]
gi|430952593|ref|ZP_19486399.1| DNA mismatch repair protein mutS [Enterococcus faecium E1576]
gi|431000726|ref|ZP_19488207.1| DNA mismatch repair protein mutS [Enterococcus faecium E1578]
gi|431234177|ref|ZP_19502946.1| DNA mismatch repair protein mutS [Enterococcus faecium E1622]
gi|431255693|ref|ZP_19504816.1| DNA mismatch repair protein mutS [Enterococcus faecium E1623]
gi|431303464|ref|ZP_19508311.1| DNA mismatch repair protein mutS [Enterococcus faecium E1626]
gi|431697298|ref|ZP_19524835.1| DNA mismatch repair protein mutS [Enterococcus faecium E1904]
gi|447911658|ref|YP_007393070.1| DNA mismatch repair protein MutS [Enterococcus faecium NRRL B-2354]
gi|291589432|gb|EFF21239.1| DNA mismatch repair protein MutS [Enterococcus faecium E1071]
gi|291594097|gb|EFF25553.1| DNA mismatch repair protein MutS [Enterococcus faecium E1679]
gi|402924882|gb|EJX45066.1| DNA mismatch repair protein MutS [Enterococcus faecium V689]
gi|402946224|gb|EJX64513.1| DNA mismatch repair protein MutS [Enterococcus faecium P1190]
gi|402956777|gb|EJX74212.1| DNA mismatch repair protein MutS [Enterococcus faecium P1139]
gi|402966003|gb|EJX82676.1| DNA mismatch repair protein MutS [Enterococcus faecium P1123]
gi|403017982|gb|EJY30699.1| DNA mismatch repair protein MutS [Enterococcus faecium 513]
gi|403040830|gb|EJY51878.1| DNA mismatch repair protein MutS [Enterococcus faecium 503]
gi|404455559|gb|EKA02403.1| DNA mismatch repair protein MutS [Enterococcus sp. GMD4E]
gi|404459393|gb|EKA05759.1| DNA mismatch repair protein MutS [Enterococcus sp. GMD3E]
gi|404464117|gb|EKA09678.1| DNA mismatch repair protein MutS [Enterococcus sp. GMD2E]
gi|404470103|gb|EKA14775.1| DNA mismatch repair protein MutS [Enterococcus sp. GMD1E]
gi|410733671|gb|EKQ75594.1| DNA mismatch repair protein MutS [Enterococcus sp. GMD5E]
gi|425722345|gb|EKU85240.1| DNA mismatch repair protein mutS [Enterococcus durans FB129-CNAB-4]
gi|430550172|gb|ELA89977.1| DNA mismatch repair protein mutS [Enterococcus faecium E1573]
gi|430557192|gb|ELA96660.1| DNA mismatch repair protein mutS [Enterococcus faecium E1576]
gi|430562385|gb|ELB01617.1| DNA mismatch repair protein mutS [Enterococcus faecium E1578]
gi|430573203|gb|ELB12033.1| DNA mismatch repair protein mutS [Enterococcus faecium E1622]
gi|430577891|gb|ELB16471.1| DNA mismatch repair protein mutS [Enterococcus faecium E1623]
gi|430580105|gb|ELB18585.1| DNA mismatch repair protein mutS [Enterococcus faecium E1626]
gi|430597568|gb|ELB35359.1| DNA mismatch repair protein mutS [Enterococcus faecium E1904]
gi|445187367|gb|AGE29009.1| DNA mismatch repair protein MutS [Enterococcus faecium NRRL B-2354]
Length = 881
Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|430836453|ref|ZP_19454433.1| DNA mismatch repair protein mutS [Enterococcus faecium E0680]
gi|431380434|ref|ZP_19510815.1| DNA mismatch repair protein mutS [Enterococcus faecium E1627]
gi|431506813|ref|ZP_19515639.1| DNA mismatch repair protein mutS [Enterococcus faecium E1634]
gi|430488413|gb|ELA65092.1| DNA mismatch repair protein mutS [Enterococcus faecium E0680]
gi|430582302|gb|ELB20729.1| DNA mismatch repair protein mutS [Enterococcus faecium E1627]
gi|430587200|gb|ELB25433.1| DNA mismatch repair protein mutS [Enterococcus faecium E1634]
Length = 881
Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|363744798|ref|XP_003643127.1| PREDICTED: DNA mismatch repair protein Msh3-like [Gallus gallus]
Length = 1090
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 44/74 (59%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I L G+Q Y+PN+T + R +G R V+++TGPNMGGKS+
Sbjct: 817 HPVIDVL-------LGEQDQYVPNTTNLSR---------DGER---VMIITGPNMGGKSS 857
Query: 210 VMRQLGLITILAQM 223
++Q+ LIT++AQ+
Sbjct: 858 YIKQVALITVMAQI 871
>gi|309799624|ref|ZP_07693848.1| DNA mismatch repair protein MutS [Streptococcus infantis SK1302]
gi|308116746|gb|EFO54198.1| DNA mismatch repair protein MutS [Streptococcus infantis SK1302]
Length = 329
Score = 50.1 bits (118), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS +G ED ++ L+TGPNM GKST MRQL + ++AQ+
Sbjct: 65 GAQTYIPNSIQMG---EDT----------SIQLITGPNMSGKSTYMRQLAMTAVMAQI 109
>gi|418976809|ref|ZP_13524657.1| DNA mismatch repair protein MutS [Streptococcus mitis SK575]
gi|383350889|gb|EID28735.1| DNA mismatch repair protein MutS [Streptococcus mitis SK575]
Length = 844
Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPN+ + ED ++ L+TGPNM GKST MRQL + I+AQM
Sbjct: 580 GAQTYIPNTIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAIMAQM 624
>gi|307710199|ref|ZP_07646643.1| DNA mismatch repair protein MutS [Streptococcus mitis SK564]
gi|307619179|gb|EFN98311.1| DNA mismatch repair protein MutS [Streptococcus mitis SK564]
Length = 844
Score = 50.1 bits (118), Expect = 6e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPN+ + ED ++ L+TGPNM GKST MRQL + I+AQM
Sbjct: 580 GAQTYIPNTIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAIMAQM 624
>gi|431439105|ref|ZP_19513286.1| DNA mismatch repair protein mutS [Enterococcus faecium E1630]
gi|431760154|ref|ZP_19548757.1| DNA mismatch repair protein mutS [Enterococcus faecium E3346]
gi|430586780|gb|ELB25028.1| DNA mismatch repair protein mutS [Enterococcus faecium E1630]
gi|430625258|gb|ELB61906.1| DNA mismatch repair protein mutS [Enterococcus faecium E3346]
Length = 881
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|431208718|ref|ZP_19500931.1| DNA mismatch repair protein mutS [Enterococcus faecium E1620]
gi|430570724|gb|ELB09664.1| DNA mismatch repair protein mutS [Enterococcus faecium E1620]
Length = 881
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|425058567|ref|ZP_18461945.1| DNA mismatch repair protein MutS [Enterococcus faecium 504]
gi|403038160|gb|EJY49393.1| DNA mismatch repair protein MutS [Enterococcus faecium 504]
Length = 881
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|293556850|ref|ZP_06675411.1| DNA mismatch repair protein MutS [Enterococcus faecium E1039]
gi|291600934|gb|EFF31225.1| DNA mismatch repair protein MutS [Enterococcus faecium E1039]
Length = 881
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|69248279|ref|ZP_00604703.1| MutS 1 protein [Enterococcus faecium DO]
gi|257878801|ref|ZP_05658454.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,230,933]
gi|257881439|ref|ZP_05661092.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,502]
gi|257890660|ref|ZP_05670313.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,410]
gi|261207074|ref|ZP_05921763.1| DNA mismatch repair protein MutS [Enterococcus faecium TC 6]
gi|289565924|ref|ZP_06446364.1| DNA mismatch repair protein MutS [Enterococcus faecium D344SRF]
gi|293563776|ref|ZP_06678215.1| DNA mismatch repair protein MutS [Enterococcus faecium E1162]
gi|294614622|ref|ZP_06694526.1| DNA mismatch repair protein MutS [Enterococcus faecium E1636]
gi|294621199|ref|ZP_06700384.1| DNA mismatch repair protein MutS [Enterococcus faecium U0317]
gi|314938825|ref|ZP_07846096.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0133a04]
gi|314943631|ref|ZP_07850385.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0133C]
gi|314948710|ref|ZP_07852083.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0082]
gi|314952160|ref|ZP_07855178.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0133A]
gi|314991866|ref|ZP_07857323.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0133B]
gi|314996579|ref|ZP_07861614.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0133a01]
gi|383327496|ref|YP_005353380.1| DNA mismatch repair protein MutS [Enterococcus faecium Aus0004]
gi|389867318|ref|YP_006374741.1| DNA mismatch repair protein MutS [Enterococcus faecium DO]
gi|415891069|ref|ZP_11549654.1| DNA mismatch repair protein MutS [Enterococcus faecium E4453]
gi|424802623|ref|ZP_18228109.1| DNA mismatch repair protein MutS [Enterococcus faecium S447]
gi|424827507|ref|ZP_18252302.1| DNA mismatch repair protein MutS [Enterococcus faecium R501]
gi|424857781|ref|ZP_18281880.1| DNA mismatch repair protein MutS [Enterococcus faecium R499]
gi|424868969|ref|ZP_18292694.1| DNA mismatch repair protein MutS [Enterococcus faecium R497]
gi|424950343|ref|ZP_18365511.1| DNA mismatch repair protein MutS [Enterococcus faecium R496]
gi|424954585|ref|ZP_18369476.1| DNA mismatch repair protein MutS [Enterococcus faecium R494]
gi|424957683|ref|ZP_18372393.1| DNA mismatch repair protein MutS [Enterococcus faecium R446]
gi|424960856|ref|ZP_18375335.1| DNA mismatch repair protein MutS [Enterococcus faecium P1986]
gi|424967297|ref|ZP_18381002.1| DNA mismatch repair protein MutS [Enterococcus faecium P1140]
gi|424975120|ref|ZP_18388305.1| DNA mismatch repair protein MutS [Enterococcus faecium P1137]
gi|424979695|ref|ZP_18392533.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV99]
gi|424982941|ref|ZP_18395554.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV69]
gi|424986647|ref|ZP_18399055.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV38]
gi|424990665|ref|ZP_18402870.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV26]
gi|424993879|ref|ZP_18405851.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV168]
gi|424998893|ref|ZP_18410554.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV165]
gi|425000837|ref|ZP_18412383.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV161]
gi|425004325|ref|ZP_18415642.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV102]
gi|425006966|ref|ZP_18418119.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV1]
gi|425012041|ref|ZP_18422892.1| DNA mismatch repair protein MutS [Enterococcus faecium E422]
gi|425012983|ref|ZP_18423736.1| DNA mismatch repair protein MutS [Enterococcus faecium E417]
gi|425019039|ref|ZP_18429427.1| DNA mismatch repair protein MutS [Enterococcus faecium C621]
gi|425021797|ref|ZP_18432022.1| DNA mismatch repair protein MutS [Enterococcus faecium C497]
gi|425023023|ref|ZP_18433165.1| DNA mismatch repair protein MutS [Enterococcus faecium C1904]
gi|425032504|ref|ZP_18437547.1| DNA mismatch repair protein MutS [Enterococcus faecium 515]
gi|425036542|ref|ZP_18441285.1| DNA mismatch repair protein MutS [Enterococcus faecium 514]
gi|425041873|ref|ZP_18446252.1| DNA mismatch repair protein MutS [Enterococcus faecium 511]
gi|425045602|ref|ZP_18449693.1| DNA mismatch repair protein MutS [Enterococcus faecium 510]
gi|425050658|ref|ZP_18454382.1| DNA mismatch repair protein MutS [Enterococcus faecium 509]
gi|425050767|ref|ZP_18454480.1| DNA mismatch repair protein MutS [Enterococcus faecium 506]
gi|430820940|ref|ZP_19439559.1| DNA mismatch repair protein mutS [Enterococcus faecium E0045]
gi|430828857|ref|ZP_19446969.1| DNA mismatch repair protein mutS [Enterococcus faecium E0269]
gi|430831899|ref|ZP_19449947.1| DNA mismatch repair protein mutS [Enterococcus faecium E0333]
gi|430847392|ref|ZP_19465230.1| DNA mismatch repair protein mutS [Enterococcus faecium E1133]
gi|430855669|ref|ZP_19473377.1| DNA mismatch repair protein mutS [Enterococcus faecium E1392]
gi|431544341|ref|ZP_19518637.1| DNA mismatch repair protein mutS [Enterococcus faecium E1731]
gi|431747155|ref|ZP_19535956.1| DNA mismatch repair protein mutS [Enterococcus faecium E2134]
gi|431749343|ref|ZP_19538085.1| DNA mismatch repair protein mutS [Enterococcus faecium E2297]
gi|431755857|ref|ZP_19544500.1| DNA mismatch repair protein mutS [Enterococcus faecium E2883]
gi|431767994|ref|ZP_19556436.1| DNA mismatch repair protein mutS [Enterococcus faecium E1321]
gi|431769501|ref|ZP_19557909.1| DNA mismatch repair protein mutS [Enterococcus faecium E1644]
gi|431773359|ref|ZP_19561684.1| DNA mismatch repair protein mutS [Enterococcus faecium E2369]
gi|431776458|ref|ZP_19564719.1| DNA mismatch repair protein mutS [Enterococcus faecium E2560]
gi|431779624|ref|ZP_19567817.1| DNA mismatch repair protein mutS [Enterococcus faecium E4389]
gi|431782570|ref|ZP_19570703.1| DNA mismatch repair protein mutS [Enterococcus faecium E6012]
gi|431784398|ref|ZP_19572437.1| DNA mismatch repair protein mutS [Enterococcus faecium E6045]
gi|35367172|gb|AAN85558.1| MutS [Enterococcus faecium]
gi|35367177|gb|AAN85560.1| MutS [Enterococcus faecium]
gi|68194464|gb|EAN08964.1| MutS 1 protein [Enterococcus faecium DO]
gi|257813029|gb|EEV41787.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,230,933]
gi|257817097|gb|EEV44425.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,502]
gi|257827020|gb|EEV53646.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,410]
gi|260078702|gb|EEW66404.1| DNA mismatch repair protein MutS [Enterococcus faecium TC 6]
gi|289162297|gb|EFD10157.1| DNA mismatch repair protein MutS [Enterococcus faecium D344SRF]
gi|291592524|gb|EFF24129.1| DNA mismatch repair protein MutS [Enterococcus faecium E1636]
gi|291599195|gb|EFF30227.1| DNA mismatch repair protein MutS [Enterococcus faecium U0317]
gi|291604257|gb|EFF33752.1| DNA mismatch repair protein MutS [Enterococcus faecium E1162]
gi|313589268|gb|EFR68113.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0133a01]
gi|313593571|gb|EFR72416.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0133B]
gi|313595692|gb|EFR74537.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0133A]
gi|313597668|gb|EFR76513.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0133C]
gi|313641836|gb|EFS06416.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0133a04]
gi|313644882|gb|EFS09462.1| DNA mismatch repair protein MutS [Enterococcus faecium TX0082]
gi|364094161|gb|EHM36360.1| DNA mismatch repair protein MutS [Enterococcus faecium E4453]
gi|378937190|gb|AFC62262.1| DNA mismatch repair protein MutS [Enterococcus faecium Aus0004]
gi|388532567|gb|AFK57759.1| DNA mismatch repair protein MutS [Enterococcus faecium DO]
gi|402919449|gb|EJX40048.1| DNA mismatch repair protein MutS [Enterococcus faecium S447]
gi|402923415|gb|EJX43709.1| DNA mismatch repair protein MutS [Enterococcus faecium R501]
gi|402928020|gb|EJX47926.1| DNA mismatch repair protein MutS [Enterococcus faecium R499]
gi|402933330|gb|EJX52776.1| DNA mismatch repair protein MutS [Enterococcus faecium R496]
gi|402936316|gb|EJX55502.1| DNA mismatch repair protein MutS [Enterococcus faecium R497]
gi|402936393|gb|EJX55575.1| DNA mismatch repair protein MutS [Enterococcus faecium R494]
gi|402942848|gb|EJX61399.1| DNA mismatch repair protein MutS [Enterococcus faecium R446]
gi|402945672|gb|EJX64007.1| DNA mismatch repair protein MutS [Enterococcus faecium P1986]
gi|402954652|gb|EJX72252.1| DNA mismatch repair protein MutS [Enterococcus faecium P1137]
gi|402954696|gb|EJX72293.1| DNA mismatch repair protein MutS [Enterococcus faecium P1140]
gi|402968307|gb|EJX84794.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV99]
gi|402972640|gb|EJX88827.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV69]
gi|402976003|gb|EJX91926.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV38]
gi|402979061|gb|EJX94750.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV26]
gi|402981569|gb|EJX97088.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV168]
gi|402981613|gb|EJX97129.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV165]
gi|402988352|gb|EJY03364.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV161]
gi|402989753|gb|EJY04664.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV102]
gi|402994866|gb|EJY09368.1| DNA mismatch repair protein MutS [Enterococcus faecium E422]
gi|402996021|gb|EJY10430.1| DNA mismatch repair protein MutS [Enterococcus faecium ERV1]
gi|402999560|gb|EJY13744.1| DNA mismatch repair protein MutS [Enterococcus faecium C621]
gi|403002199|gb|EJY16203.1| DNA mismatch repair protein MutS [Enterococcus faecium E417]
gi|403005224|gb|EJY18955.1| DNA mismatch repair protein MutS [Enterococcus faecium C497]
gi|403011196|gb|EJY24524.1| DNA mismatch repair protein MutS [Enterococcus faecium C1904]
gi|403012748|gb|EJY25929.1| DNA mismatch repair protein MutS [Enterococcus faecium 515]
gi|403014315|gb|EJY27329.1| DNA mismatch repair protein MutS [Enterococcus faecium 514]
gi|403022766|gb|EJY35105.1| DNA mismatch repair protein MutS [Enterococcus faecium 509]
gi|403025273|gb|EJY37362.1| DNA mismatch repair protein MutS [Enterococcus faecium 511]
gi|403026675|gb|EJY38629.1| DNA mismatch repair protein MutS [Enterococcus faecium 510]
gi|403039968|gb|EJY51076.1| DNA mismatch repair protein MutS [Enterococcus faecium 506]
gi|430438988|gb|ELA49376.1| DNA mismatch repair protein mutS [Enterococcus faecium E0045]
gi|430480540|gb|ELA57714.1| DNA mismatch repair protein mutS [Enterococcus faecium E0333]
gi|430482680|gb|ELA59791.1| DNA mismatch repair protein mutS [Enterococcus faecium E0269]
gi|430537146|gb|ELA77496.1| DNA mismatch repair protein mutS [Enterococcus faecium E1133]
gi|430546724|gb|ELA86667.1| DNA mismatch repair protein mutS [Enterococcus faecium E1392]
gi|430592453|gb|ELB30468.1| DNA mismatch repair protein mutS [Enterococcus faecium E1731]
gi|430606969|gb|ELB44300.1| DNA mismatch repair protein mutS [Enterococcus faecium E2134]
gi|430611771|gb|ELB48847.1| DNA mismatch repair protein mutS [Enterococcus faecium E2297]
gi|430616356|gb|ELB53278.1| DNA mismatch repair protein mutS [Enterococcus faecium E2883]
gi|430629895|gb|ELB66279.1| DNA mismatch repair protein mutS [Enterococcus faecium E1321]
gi|430636606|gb|ELB72670.1| DNA mismatch repair protein mutS [Enterococcus faecium E2369]
gi|430636815|gb|ELB72869.1| DNA mismatch repair protein mutS [Enterococcus faecium E1644]
gi|430640777|gb|ELB76605.1| DNA mismatch repair protein mutS [Enterococcus faecium E2560]
gi|430641725|gb|ELB77520.1| DNA mismatch repair protein mutS [Enterococcus faecium E4389]
gi|430647207|gb|ELB82655.1| DNA mismatch repair protein mutS [Enterococcus faecium E6012]
gi|430649493|gb|ELB84869.1| DNA mismatch repair protein mutS [Enterococcus faecium E6045]
Length = 881
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|209486173|gb|ACI48542.1| DNA mismatch repair protein, partial [Streptococcus canis]
Length = 135
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS ++K ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 57 GVQEYIPNSISF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQM 101
>gi|330800615|ref|XP_003288330.1| hypothetical protein DICPUDRAFT_55353 [Dictyostelium purpureum]
gi|325081628|gb|EGC35137.1| hypothetical protein DICPUDRAFT_55353 [Dictyostelium purpureum]
Length = 979
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 29/66 (43%), Positives = 41/66 (62%), Gaps = 14/66 (21%)
Query: 161 YPC---ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLI 217
+PC GD +IPN + +VE N P++L+LTGPNMGGKST++RQ ++
Sbjct: 709 HPCIYSKAGDD-FIPNDLSL-----NVE-----NSPPSILVLTGPNMGGKSTLLRQACIL 757
Query: 218 TILAQM 223
I+AQM
Sbjct: 758 VIMAQM 763
>gi|430823355|ref|ZP_19441926.1| DNA mismatch repair protein mutS [Enterococcus faecium E0120]
gi|430866387|ref|ZP_19481664.1| DNA mismatch repair protein mutS [Enterococcus faecium E1574]
gi|430442068|gb|ELA52116.1| DNA mismatch repair protein mutS [Enterococcus faecium E0120]
gi|430551615|gb|ELA91366.1| DNA mismatch repair protein mutS [Enterococcus faecium E1574]
Length = 881
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|298528739|ref|ZP_07016143.1| DNA mismatch repair protein MutS [Desulfonatronospira thiodismutans
ASO3-1]
gi|298512391|gb|EFI36293.1| DNA mismatch repair protein MutS [Desulfonatronospira thiodismutans
ASO3-1]
Length = 877
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 40/74 (54%), Gaps = 22/74 (29%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPT-VLLLTGPNMGGKST 209
HP I A++ G Y+PN + ED PT +LL+TGPNM GKST
Sbjct: 578 HPAIEAIQ-------GRSGYVPNDMYL----ED----------PTRILLITGPNMAGKST 616
Query: 210 VMRQLGLITILAQM 223
V+RQ +I ILAQM
Sbjct: 617 VLRQTAIIAILAQM 630
>gi|257899421|ref|ZP_05679074.1| DNA mismatch repair protein MutS [Enterococcus faecium Com15]
gi|257837333|gb|EEV62407.1| DNA mismatch repair protein MutS [Enterococcus faecium Com15]
Length = 881
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|257887935|ref|ZP_05667588.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,141,733]
gi|430842407|ref|ZP_19460322.1| DNA mismatch repair protein mutS [Enterococcus faecium E1007]
gi|431036500|ref|ZP_19492270.1| DNA mismatch repair protein mutS [Enterococcus faecium E1590]
gi|431753029|ref|ZP_19541707.1| DNA mismatch repair protein mutS [Enterococcus faecium E2620]
gi|257823989|gb|EEV50921.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,141,733]
gi|430493488|gb|ELA69791.1| DNA mismatch repair protein mutS [Enterococcus faecium E1007]
gi|430563040|gb|ELB02271.1| DNA mismatch repair protein mutS [Enterococcus faecium E1590]
gi|430612777|gb|ELB49808.1| DNA mismatch repair protein mutS [Enterococcus faecium E2620]
Length = 881
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|431763134|ref|ZP_19551687.1| DNA mismatch repair protein mutS [Enterococcus faecium E3548]
gi|430622828|gb|ELB59538.1| DNA mismatch repair protein mutS [Enterococcus faecium E3548]
Length = 881
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|431592259|ref|ZP_19521495.1| DNA mismatch repair protein mutS [Enterococcus faecium E1861]
gi|430591884|gb|ELB29911.1| DNA mismatch repair protein mutS [Enterococcus faecium E1861]
Length = 881
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|430853214|ref|ZP_19470944.1| DNA mismatch repair protein mutS [Enterococcus faecium E1258]
gi|430541036|gb|ELA81213.1| DNA mismatch repair protein mutS [Enterococcus faecium E1258]
Length = 881
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|430850781|ref|ZP_19468538.1| DNA mismatch repair protein mutS [Enterococcus faecium E1185]
gi|430535140|gb|ELA75563.1| DNA mismatch repair protein mutS [Enterococcus faecium E1185]
Length = 881
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|424763746|ref|ZP_18191211.1| DNA mismatch repair protein MutS [Enterococcus faecium TX1337RF]
gi|431757856|ref|ZP_19546485.1| DNA mismatch repair protein mutS [Enterococcus faecium E3083]
gi|402422331|gb|EJV54571.1| DNA mismatch repair protein MutS [Enterococcus faecium TX1337RF]
gi|430618361|gb|ELB55208.1| DNA mismatch repair protein mutS [Enterococcus faecium E3083]
Length = 881
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|416133406|ref|ZP_11598107.1| DNA mismatch repair protein MutS [Enterococcus faecium E4452]
gi|364092929|gb|EHM35246.1| DNA mismatch repair protein MutS [Enterococcus faecium E4452]
Length = 881
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|344272419|ref|XP_003408029.1| PREDICTED: DNA mismatch repair protein Msh3 [Loxodonta africana]
Length = 1111
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 56/109 (51%), Gaps = 35/109 (32%)
Query: 124 IFSQRNILKDMYQQGVCVPTFLGLEE---------PHPYISALESLYPCATGDQTYIPNS 174
IFS N+ K Q C PT L+E HP I L G+Q Y+PN+
Sbjct: 811 IFSLANVAK---QGNYCRPT---LQEGRKIIIKNGRHPVIDML-------LGEQ-YVPNN 856
Query: 175 TVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
T + G+ R V+++TGPNMGGKS+ ++Q+ LITI+AQ+
Sbjct: 857 TNLS---------GDSER---VMIITGPNMGGKSSYIKQVALITIMAQI 893
>gi|116493022|ref|YP_804757.1| DNA mismatch repair protein MutS [Pediococcus pentosaceus ATCC
25745]
gi|122265514|sp|Q03EQ7.1|MUTS_PEDPA RecName: Full=DNA mismatch repair protein MutS
gi|116103172|gb|ABJ68315.1| DNA mismatch repair protein MutS [Pediococcus pentosaceus ATCC
25745]
Length = 873
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+Y+PN+ D++ + +LL+TGPNM GKST MRQL L I+AQM
Sbjct: 587 GHQSYVPNNI-------DMDDNTD------ILLITGPNMSGKSTYMRQLALTVIMAQM 631
>gi|293570767|ref|ZP_06681817.1| DNA mismatch repair protein MutS [Enterococcus faecium E980]
gi|431081632|ref|ZP_19495722.1| DNA mismatch repair protein mutS [Enterococcus faecium E1604]
gi|431118176|ref|ZP_19498130.1| DNA mismatch repair protein mutS [Enterococcus faecium E1613]
gi|431738993|ref|ZP_19527933.1| DNA mismatch repair protein mutS [Enterococcus faecium E1972]
gi|431740727|ref|ZP_19529638.1| DNA mismatch repair protein mutS [Enterococcus faecium E2039]
gi|291609239|gb|EFF38511.1| DNA mismatch repair protein MutS [Enterococcus faecium E980]
gi|430565564|gb|ELB04710.1| DNA mismatch repair protein mutS [Enterococcus faecium E1604]
gi|430568133|gb|ELB07190.1| DNA mismatch repair protein mutS [Enterococcus faecium E1613]
gi|430596536|gb|ELB34360.1| DNA mismatch repair protein mutS [Enterococcus faecium E1972]
gi|430602810|gb|ELB40360.1| DNA mismatch repair protein mutS [Enterococcus faecium E2039]
Length = 881
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|258511466|ref|YP_003184900.1| DNA mismatch repair protein MutS [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
gi|257478192|gb|ACV58511.1| DNA mismatch repair protein MutS [Alicyclobacillus acidocaldarius
subsp. acidocaldarius DSM 446]
Length = 867
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/28 (78%), Positives = 24/28 (85%)
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
++LLTGPNMGGKST MRQ LI ILAQM
Sbjct: 600 IILLTGPNMGGKSTYMRQAALIAILAQM 627
>gi|222153881|ref|YP_002563058.1| DNA mismatch repair protein MutS [Streptococcus uberis 0140J]
gi|254766641|sp|B9DW73.1|MUTS_STRU0 RecName: Full=DNA mismatch repair protein MutS
gi|222114694|emb|CAR43783.1| DNA mismatch repair protein MutS [Streptococcus uberis 0140J]
Length = 847
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ + N+ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GVQEYIPNTI-------------QFNQNTSIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|218290139|ref|ZP_03494301.1| DNA mismatch repair protein MutS [Alicyclobacillus acidocaldarius
LAA1]
gi|218239848|gb|EED07037.1| DNA mismatch repair protein MutS [Alicyclobacillus acidocaldarius
LAA1]
Length = 867
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 22/28 (78%), Positives = 24/28 (85%)
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
++LLTGPNMGGKST MRQ LI ILAQM
Sbjct: 600 IILLTGPNMGGKSTYMRQAALIAILAQM 627
>gi|431744049|ref|ZP_19532921.1| DNA mismatch repair protein mutS [Enterococcus faecium E2071]
gi|430605677|gb|ELB43059.1| DNA mismatch repair protein mutS [Enterococcus faecium E2071]
Length = 881
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|410465974|ref|ZP_11319130.1| DNA mismatch repair protein MutS [Desulfovibrio magneticus str.
Maddingley MBC34]
gi|409981004|gb|EKO37642.1| DNA mismatch repair protein MutS [Desulfovibrio magneticus str.
Maddingley MBC34]
Length = 887
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 38/73 (52%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + A+ TG YIPN S E R +LL+TGPNM GKSTV
Sbjct: 592 HPVVEAV-------TGVGNYIPNDV----------SLDESTR---MLLITGPNMAGKSTV 631
Query: 211 MRQLGLITILAQM 223
+RQ LI ILAQ+
Sbjct: 632 LRQTALIAILAQI 644
>gi|425054250|ref|ZP_18457763.1| DNA mismatch repair protein MutS [Enterococcus faecium 505]
gi|403036518|gb|EJY47866.1| DNA mismatch repair protein MutS [Enterococcus faecium 505]
Length = 881
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|304392329|ref|ZP_07374270.1| DNA mismatch repair protein MutS [Ahrensia sp. R2A130]
gi|303295433|gb|EFL89792.1| DNA mismatch repair protein MutS [Ahrensia sp. R2A130]
Length = 883
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/41 (60%), Positives = 29/41 (70%), Gaps = 1/41 (2%)
Query: 183 DVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
D GGE + ++ LLTGPNMGGKST +RQ LI ILAQM
Sbjct: 615 DCRIGGEADSG-SIWLLTGPNMGGKSTFLRQNALIAILAQM 654
>gi|239906766|ref|YP_002953507.1| DNA mismatch repair protein MutS [Desulfovibrio magneticus RS-1]
gi|239796632|dbj|BAH75621.1| DNA mismatch repair protein MutS [Desulfovibrio magneticus RS-1]
Length = 887
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 38/73 (52%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + A+ TG YIPN S E R +LL+TGPNM GKSTV
Sbjct: 592 HPVVEAV-------TGVGNYIPNDV----------SLDESTR---MLLITGPNMAGKSTV 631
Query: 211 MRQLGLITILAQM 223
+RQ LI ILAQ+
Sbjct: 632 LRQTALIAILAQI 644
>gi|227550809|ref|ZP_03980858.1| DNA mismatch repair protein MutS [Enterococcus faecium TX1330]
gi|257893264|ref|ZP_05672917.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,408]
gi|257896447|ref|ZP_05676100.1| DNA mismatch repair protein MutS [Enterococcus faecium Com12]
gi|227180046|gb|EEI61018.1| DNA mismatch repair protein MutS [Enterococcus faecium TX1330]
gi|257829643|gb|EEV56250.1| DNA mismatch repair protein MutS [Enterococcus faecium 1,231,408]
gi|257833012|gb|EEV59433.1| DNA mismatch repair protein MutS [Enterococcus faecium Com12]
Length = 881
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 31/58 (53%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS E +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSV-------------EMAEDEMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|386392603|ref|ZP_10077384.1| DNA mismatch repair protein MutS [Desulfovibrio sp. U5L]
gi|385733481|gb|EIG53679.1| DNA mismatch repair protein MutS [Desulfovibrio sp. U5L]
Length = 880
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 36/73 (49%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP I A A G YIPN + + +LL+TGPNM GKSTV
Sbjct: 585 HPVIEA-------AQGIGNYIPNDVAV-------------DDAARLLLITGPNMAGKSTV 624
Query: 211 MRQLGLITILAQM 223
+RQ LI ILAQ+
Sbjct: 625 LRQTALIAILAQI 637
>gi|417939187|ref|ZP_12582480.1| DNA mismatch repair protein MutS [Streptococcus infantis SK970]
gi|343390632|gb|EGV03212.1| DNA mismatch repair protein MutS [Streptococcus infantis SK970]
Length = 843
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + + ++ L+TGPNM GKST MRQL + ++AQM
Sbjct: 580 GAQTYIPNSI-------------QMDEATSIQLITGPNMSGKSTYMRQLAITAVMAQM 624
>gi|417858726|ref|ZP_12503783.1| DNA mismatch repair protein mutS [Agrobacterium tumefaciens F2]
gi|338824730|gb|EGP58697.1| DNA mismatch repair protein mutS [Agrobacterium tumefaciens F2]
Length = 904
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
S EG + + LLTGPNMGGKST +RQ LI ILAQ+
Sbjct: 640 SATEGGKNGAIWLLTGPNMGGKSTFLRQNALIAILAQI 677
>gi|322390457|ref|ZP_08063977.1| DNA mismatch repair protein HexA [Streptococcus parasanguinis ATCC
903]
gi|321142856|gb|EFX38314.1| DNA mismatch repair protein HexA [Streptococcus parasanguinis ATCC
903]
Length = 849
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS + + D++ L+TGPNM GKST MRQL +I ILAQ+
Sbjct: 580 GAQSYIPNSIFMDE-ERDIQ------------LITGPNMSGKSTYMRQLAIIVILAQI 624
>gi|326794019|ref|YP_004311839.1| DNA mismatch repair protein mutS [Marinomonas mediterranea MMB-1]
gi|326544783|gb|ADZ90003.1| DNA mismatch repair protein mutS [Marinomonas mediterranea MMB-1]
Length = 880
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 29/34 (85%)
Query: 189 EGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
E NR+ ++L++TGPNMGGKST MRQ+ +IT+LA
Sbjct: 607 ELNRQRSLLMITGPNMGGKSTYMRQVAIITLLAH 640
>gi|351706766|gb|EHB09685.1| DNA mismatch repair protein Msh3, partial [Heterocephalus glaber]
Length = 1071
Score = 50.1 bits (118), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I L G+Q Y+PNST R ED E V+++TGPNMGGKS+
Sbjct: 801 HPVIDVL-------LGEQDQYVPNST---RLSEDSER---------VMIVTGPNMGGKSS 841
Query: 210 VMRQLGLITILAQM 223
++Q+ LIT++AQ+
Sbjct: 842 YIKQVALITLMAQV 855
>gi|337282898|ref|YP_004622369.1| DNA mismatch repair protein HexA [Streptococcus parasanguinis ATCC
15912]
gi|335370491|gb|AEH56441.1| DNA mismatch repair protein HexA [Streptococcus parasanguinis ATCC
15912]
Length = 849
Score = 50.1 bits (118), Expect = 7e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS + + D++ L+TGPNM GKST MRQL +I ILAQ+
Sbjct: 580 GAQSYIPNSIFMDE-ERDIQ------------LITGPNMSGKSTYMRQLAIIVILAQI 624
>gi|410917390|ref|XP_003972169.1| PREDICTED: multivesicular body subunit 12A-like [Takifugu rubripes]
Length = 288
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 31/101 (30%), Positives = 53/101 (52%), Gaps = 11/101 (10%)
Query: 14 KPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESLFQID 73
+P+TA+A + CP + +I+ T D A+ R +F ++ YLC SK
Sbjct: 11 RPVTAVAWTSNASTCPKDFIMINVTED-GAAANFTR--SFGMKSGYYLCFSKD---LACG 64
Query: 74 YIVENICIINEKETPPDGFCLIARTLD-----SDQGQICER 109
+V +I +I++KE+ P G+C IA L+ S + ++C R
Sbjct: 65 MVVADIQLISDKESIPHGYCYIAEHLEPKATVSKKKRLCAR 105
>gi|417937045|ref|ZP_12580351.1| DNA mismatch repair protein MutS [Streptococcus infantis X]
gi|343399487|gb|EGV12009.1| DNA mismatch repair protein MutS [Streptococcus infantis X]
Length = 844
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + ED ++ L+TGPNM GKST MRQL + ++AQM
Sbjct: 580 GAQTYIPNSI---QMDEDT----------SIQLITGPNMSGKSTYMRQLAITAVMAQM 624
>gi|322392638|ref|ZP_08066098.1| DNA mismatch repair protein HexA [Streptococcus peroris ATCC
700780]
gi|321144630|gb|EFX40031.1| DNA mismatch repair protein HexA [Streptococcus peroris ATCC
700780]
Length = 844
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + + + ++ L+TGPNM GKST MRQL + ++AQM
Sbjct: 580 GAQTYIPNSI-------------QMDEETSIQLITGPNMSGKSTYMRQLAITAVMAQM 624
>gi|320032462|gb|EFW14415.1| DNA mismatch repair protein Msh3 [Coccidioides posadasii str.
Silveira]
Length = 1190
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 12/55 (21%)
Query: 169 TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
TY+PN D E G +G R LL+TGPNMGGKS+ +RQ+ LI+I+ Q+
Sbjct: 943 TYVPN---------DTELGIDGTR---ALLVTGPNMGGKSSYVRQVALISIMGQI 985
>gi|86606675|ref|YP_475438.1| DNA mismatch repair protein MutS [Synechococcus sp. JA-3-3Ab]
gi|123505746|sp|Q2JT35.1|MUTS_SYNJA RecName: Full=DNA mismatch repair protein MutS
gi|86555217|gb|ABD00175.1| DNA mismatch repair protein MutS [Synechococcus sp. JA-3-3Ab]
Length = 882
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 11/54 (20%)
Query: 170 YIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++PNS +G P +++LTGPNM GKST +RQ+GLI ILAQM
Sbjct: 621 FVPNSVRLG-----------SPHGPDLIVLTGPNMSGKSTYLRQIGLIQILAQM 663
>gi|414157706|ref|ZP_11414002.1| DNA mismatch repair protein mutS [Streptococcus sp. F0441]
gi|410871624|gb|EKS19571.1| DNA mismatch repair protein mutS [Streptococcus sp. F0441]
Length = 844
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + ED ++ L+TGPNM GKST MRQL + I+AQ+
Sbjct: 580 GAQTYIPNSI---QMSEDT----------SIQLITGPNMSGKSTYMRQLAMTAIMAQL 624
>gi|345568137|gb|EGX51038.1| hypothetical protein AOL_s00054g774 [Arthrobotrys oligospora ATCC
24927]
Length = 1161
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 36/56 (64%), Gaps = 12/56 (21%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+TY+PN D++ G + R LL+TGPNMGGKS+ +RQ+ LI I+AQ+
Sbjct: 917 ETYVPN---------DIDLGADQRR---TLLVTGPNMGGKSSYVRQIALIAIMAQI 960
>gi|317131677|ref|YP_004090991.1| DNA mismatch repair protein MutS [Ethanoligenens harbinense YUAN-3]
gi|315469656|gb|ADU26260.1| DNA mismatch repair protein MutS [Ethanoligenens harbinense YUAN-3]
Length = 871
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 19/73 (26%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + A+ S P ++PN D E +G+R V ++TGPNM GKST
Sbjct: 590 HPVVEAILSGVP-------FVPN---------DTELDMDGDR---VAIITGPNMAGKSTY 630
Query: 211 MRQLGLITILAQM 223
MRQ+ LIT++AQ+
Sbjct: 631 MRQVALITLMAQI 643
>gi|317153256|ref|YP_004121304.1| DNA mismatch repair protein MutS [Desulfovibrio aespoeensis Aspo-2]
gi|316943507|gb|ADU62558.1| DNA mismatch repair protein MutS [Desulfovibrio aespoeensis Aspo-2]
Length = 888
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 34/60 (56%), Gaps = 13/60 (21%)
Query: 164 ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
A G TYIPN + R K +LL+TGPNM GKSTV+RQ+ + I+AQ+
Sbjct: 598 AMGRATYIPNDLRMDRDKR-------------ILLITGPNMAGKSTVLRQVAIFVIMAQI 644
>gi|419800656|ref|ZP_14325927.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis
F0449]
gi|385694484|gb|EIG25085.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis
F0449]
Length = 849
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS + + D++ L+TGPNM GKST MRQL +I ILAQ+
Sbjct: 580 GAQSYIPNSIFMDE-ERDIQ------------LITGPNMSGKSTYMRQLAIIVILAQI 624
>gi|312866817|ref|ZP_07727030.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis
F0405]
gi|311097600|gb|EFQ55831.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis
F0405]
Length = 849
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS + + D++ L+TGPNM GKST MRQL +I ILAQ+
Sbjct: 580 GAQSYIPNSIFMDE-ERDIQ------------LITGPNMSGKSTYMRQLAIIVILAQI 624
>gi|311068227|ref|YP_003973150.1| DNA mismatch repair protein MutS [Bacillus atrophaeus 1942]
gi|310868744|gb|ADP32219.1| DNA mismatch repair protein MutS [Bacillus atrophaeus 1942]
Length = 860
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q Y+PN+ +G + +LL+TGPNM GKST MRQ+ LI+ILAQ+
Sbjct: 582 QEYVPNNCEMGESSQ-------------MLLITGPNMSGKSTYMRQIALISILAQI 624
>gi|254567329|ref|XP_002490775.1| Protein that forms heterodimers with Msh3p and Msh6p [Komagataella
pastoris GS115]
gi|238030571|emb|CAY68495.1| Protein that forms heterodimers with Msh3p and Msh6p [Komagataella
pastoris GS115]
gi|328351159|emb|CCA37559.1| DNA mismatch repair protein mutS [Komagataella pastoris CBS 7435]
Length = 931
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/84 (30%), Positives = 45/84 (53%), Gaps = 14/84 (16%)
Query: 142 PTFLGLEEPHPYISALESLYPC--ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLL 199
P GL++ + + + +PC D T+I N V+ + + + ++
Sbjct: 621 PKLYGLDDSSRKLKLIGARHPCLETQDDLTFIANDVVLTKDESEFA------------II 668
Query: 200 TGPNMGGKSTVMRQLGLITILAQM 223
TGPNMGGKST +RQ+G+I ++AQ+
Sbjct: 669 TGPNMGGKSTYIRQVGVIALMAQI 692
>gi|86610157|ref|YP_478919.1| DNA mismatch repair protein MutS [Synechococcus sp.
JA-2-3B'a(2-13)]
gi|123500848|sp|Q2JIA6.1|MUTS_SYNJB RecName: Full=DNA mismatch repair protein MutS
gi|86558699|gb|ABD03656.1| DNA mismatch repair protein MutS [Synechococcus sp.
JA-2-3B'a(2-13)]
Length = 884
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 25/54 (46%), Positives = 33/54 (61%), Gaps = 11/54 (20%)
Query: 170 YIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++PNS +G P +++LTGPNM GKST +RQ+GLI ILAQM
Sbjct: 631 FVPNSVQLG-----------SPHGPDLIVLTGPNMSGKSTYLRQIGLIQILAQM 673
>gi|387880492|ref|YP_006310795.1| DNA mismatch repair protein [Streptococcus parasanguinis FW213]
gi|386793940|gb|AFJ26975.1| DNA mismatch repair protein [Streptococcus parasanguinis FW213]
Length = 849
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS + + D++ L+TGPNM GKST MRQL +I ILAQ+
Sbjct: 580 GAQSYIPNSIFMDE-ERDIQ------------LITGPNMSGKSTYMRQLAIIVILAQI 624
>gi|419823792|ref|ZP_14347326.1| DNA mismatch repair protein MutS [Bacillus atrophaeus C89]
gi|388472031|gb|EIM08820.1| DNA mismatch repair protein MutS [Bacillus atrophaeus C89]
Length = 860
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 34/56 (60%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q Y+PN+ +G + +LL+TGPNM GKST MRQ+ LI+ILAQ+
Sbjct: 582 QEYVPNNCEMGESSQ-------------MLLITGPNMSGKSTYMRQIALISILAQI 624
>gi|417918056|ref|ZP_12561609.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis
SK236]
gi|342829047|gb|EGU63408.1| DNA mismatch repair protein MutS [Streptococcus parasanguinis
SK236]
Length = 857
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS + ++ + L+TGPNM GKST MRQL +I ILAQ+
Sbjct: 580 GAQSYIPNSIFMDEERD-------------IQLITGPNMSGKSTYMRQLAIIVILAQI 624
>gi|317042640|gb|ADU88888.1| DNA mismatch repair protein MutS [Streptococcus uberis]
Length = 226
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ + N+ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 149 GVQEYIPNTI-------------QFNQNTSIQLITGPNMSGKSTYMRQLALTVIMAQM 193
>gi|354557463|ref|ZP_08976721.1| DNA mismatch repair protein mutS [Desulfitobacterium
metallireducens DSM 15288]
gi|353550257|gb|EHC19694.1| DNA mismatch repair protein mutS [Desulfitobacterium
metallireducens DSM 15288]
Length = 849
Score = 50.1 bits (118), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/73 (36%), Positives = 39/73 (53%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCATG---DQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
I LE +P + T++PN T++ R K + L+TGPNM GKST
Sbjct: 565 IQILEGRHPVVENMLENGTFVPNDTLLSRSKH-------------LALITGPNMAGKSTY 611
Query: 211 MRQLGLITILAQM 223
MRQ+ LI ++AQ+
Sbjct: 612 MRQVALIVLMAQI 624
>gi|393200269|ref|YP_006462111.1| mismatch repair ATPase [Solibacillus silvestris StLB046]
gi|327439600|dbj|BAK15965.1| mismatch repair ATPase [Solibacillus silvestris StLB046]
Length = 871
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 20/77 (25%)
Query: 147 LEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGG 206
+E HP + + Q+Y+PN V+ K ++L+TGPNM G
Sbjct: 571 IEGRHPVVEKM-------LNKQSYVPNDCVLTNDK-------------NMMLITGPNMSG 610
Query: 207 KSTVMRQLGLITILAQM 223
KST MRQ+ LI +LAQM
Sbjct: 611 KSTYMRQVALIVVLAQM 627
>gi|379728095|ref|YP_005320280.1| DNA mismatch repair protein MutS [Melissococcus plutonius DAT561]
gi|376318998|dbj|BAL62785.1| DNA mismatch repair protein MutS [Melissococcus plutonius DAT561]
Length = 862
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCA---TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
+S +E +P G Q YIPN+ E + T LL+TGPNM GKST
Sbjct: 572 LSIVEGRHPVVEKVLGYQEYIPNNI-------------EMDSATTTLLITGPNMSGKSTY 618
Query: 211 MRQLGLITILAQM 223
MRQL L I+AQ+
Sbjct: 619 MRQLALTVIMAQI 631
>gi|328872398|gb|EGG20765.1| mutS like protein [Dictyostelium fasciculatum]
Length = 1237
Score = 50.1 bits (118), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 45/172 (26%), Positives = 78/172 (45%), Gaps = 28/172 (16%)
Query: 60 YLCVSKTESL--FQIDYIVENICIINEKETPPDGFCLIARTLDSDQGQICERGGV-VDYK 116
+L ++ T+ L + YI+EN+ ++ + TL +++ + G V DY
Sbjct: 862 WLKINATQKLSRYHTPYIIENVKLLAQHRE--------RLTLLANEAWLDFLGKVGNDYT 913
Query: 117 PQQSNNTIFSQRNILKDMYQQGVCVPTFLGLEEPHPYISALESLYPCAT---GDQ--TYI 171
S T + + L + + G+ L P I+ +E +P G + +Y+
Sbjct: 914 LYSSMITKLALLDCLMSLAKLGMSAGYVLPELSSEPGINVVEGRHPIVEMTLGQKGGSYV 973
Query: 172 PNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
PNS + +E +++TGPNMGGKS+ +RQ LI I+AQM
Sbjct: 974 PNSIKLSSAEE------------RAMIITGPNMGGKSSFIRQTSLIVIMAQM 1013
>gi|6224917|gb|AAF06013.1|AF193018_1 MutS homolog 7 [Arabidopsis thaliana]
Length = 1109
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 154 ISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQ 213
I L + A Q +PN ++G + G+ P LLLTGPNMGGKST++R
Sbjct: 811 IQGLWHPFAVAADGQLPVPNDILLGEARR-----SSGSIHPRSLLLTGPNMGGKSTLLRA 865
Query: 214 LGLITILAQM 223
L I AQ+
Sbjct: 866 TCLAVIFAQL 875
>gi|30687514|ref|NP_850630.1| DNA mismatch repair protein Msh6-2 [Arabidopsis thaliana]
gi|12643849|sp|Q9SMV7.1|MSH7_ARATH RecName: Full=DNA mismatch repair protein MSH7; Short=AtMSH7;
AltName: Full=MutS protein homolog 7
gi|3757550|emb|CAA07685.1| Msh6-2 protein [Arabidopsis thaliana]
gi|9294039|dbj|BAB01996.1| DNA repair protein MutS [Arabidopsis thaliana]
gi|332643383|gb|AEE76904.1| DNA mismatch repair protein Msh6-2 [Arabidopsis thaliana]
Length = 1109
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/70 (38%), Positives = 36/70 (51%), Gaps = 5/70 (7%)
Query: 154 ISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQ 213
I L + A Q +PN ++G + G+ P LLLTGPNMGGKST++R
Sbjct: 811 IQGLWHPFAVAADGQLPVPNDILLGEARR-----SSGSIHPRSLLLTGPNMGGKSTLLRA 865
Query: 214 LGLITILAQM 223
L I AQ+
Sbjct: 866 TCLAVIFAQL 875
>gi|424898002|ref|ZP_18321576.1| DNA mismatch repair protein MutS [Rhizobium leguminosarum bv.
trifolii WSM2297]
gi|393182229|gb|EJC82268.1| DNA mismatch repair protein MutS [Rhizobium leguminosarum bv.
trifolii WSM2297]
Length = 908
Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 28/38 (73%)
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
S G++ + LLTGPNMGGKST +RQ LI+ILAQM
Sbjct: 647 SPKSGDKDGAIWLLTGPNMGGKSTFLRQNALISILAQM 684
>gi|317042608|gb|ADU88872.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042674|gb|ADU88905.1| DNA mismatch repair protein MutS [Streptococcus uberis]
Length = 226
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ + N+ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 149 GVQEYIPNTI-------------QFNQNTSIQLITGPNMSGKSTYMRQLALTVIMAQM 193
>gi|419781976|ref|ZP_14307787.1| DNA mismatch repair protein MutS [Streptococcus oralis SK610]
gi|383183617|gb|EIC76152.1| DNA mismatch repair protein MutS [Streptococcus oralis SK610]
Length = 844
Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + ED ++ L+TGPNM GKST MRQL + I+AQ+
Sbjct: 580 GAQTYIPNSIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAIMAQL 624
>gi|345798537|ref|XP_536307.3| PREDICTED: DNA mismatch repair protein Msh3 [Canis lupus
familiaris]
Length = 1066
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I L G+Q Y+PNST + G+ R V+++TGPNMGGKS+
Sbjct: 795 HPVIDVL-------LGEQDQYVPNSTNLS---------GDSER---VMIITGPNMGGKSS 835
Query: 210 VMRQLGLITILAQM 223
++Q+ LITI+AQ+
Sbjct: 836 YIKQVALITIMAQI 849
>gi|303316169|ref|XP_003068089.1| DNA mismatch repair family protein [Coccidioides posadasii C735
delta SOWgp]
gi|240107765|gb|EER25944.1| DNA mismatch repair family protein [Coccidioides posadasii C735
delta SOWgp]
Length = 1125
Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 26/55 (47%), Positives = 35/55 (63%), Gaps = 12/55 (21%)
Query: 169 TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
TY+PN D E G +G R LL+TGPNMGGKS+ +RQ+ LI+I+ Q+
Sbjct: 878 TYVPN---------DTELGIDGTR---ALLVTGPNMGGKSSYVRQVALISIMGQI 920
>gi|395764962|ref|ZP_10445582.1| DNA mismatch repair protein mutS [Bartonella sp. DB5-6]
gi|395413779|gb|EJF80241.1| DNA mismatch repair protein mutS [Bartonella sp. DB5-6]
Length = 914
Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 22/35 (62%), Positives = 27/35 (77%)
Query: 189 EGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
EG++ + LLTGPNMGGKST +RQ LI I+AQM
Sbjct: 650 EGHQYAAIWLLTGPNMGGKSTFLRQNALIAIMAQM 684
>gi|308069371|ref|YP_003870976.1| DNA mismatch repair protein mutS [Paenibacillus polymyxa E681]
gi|305858650|gb|ADM70438.1| DNA mismatch repair protein mutS [Paenibacillus polymyxa E681]
Length = 981
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 54/105 (51%), Gaps = 22/105 (20%)
Query: 119 QSNNTIFSQRNILKDMYQQGVCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIG 178
QS ++ S+R +K G F+ + HP + A+ D +I NSTV+
Sbjct: 593 QSLASVSSERGFVKPELTTGY---DFVVEQGRHPVVEAV-------MKDGGFIANSTVL- 641
Query: 179 RCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
E+ ++ +LL+TGPNM GKST MRQ+ LI I+AQ+
Sbjct: 642 ---EETDA--------HILLITGPNMAGKSTYMRQVALIAIMAQI 675
>gi|419780651|ref|ZP_14306494.1| DNA mismatch repair protein MutS [Streptococcus oralis SK100]
gi|383185027|gb|EIC77530.1| DNA mismatch repair protein MutS [Streptococcus oralis SK100]
Length = 844
Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + ED ++ L+TGPNM GKST MRQL + I+AQ+
Sbjct: 580 GAQTYIPNSIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAIMAQL 624
>gi|373115723|ref|ZP_09529890.1| DNA mismatch repair protein MutS [Lachnospiraceae bacterium
7_1_58FAA]
gi|371670110|gb|EHO35198.1| DNA mismatch repair protein MutS [Lachnospiraceae bacterium
7_1_58FAA]
Length = 865
Score = 49.7 bits (117), Expect = 8e-04, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 191 NRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
NR TV ++TGPNM GKST MRQ+ LI ++AQM
Sbjct: 614 NRDDTVAIITGPNMAGKSTYMRQVALIVLMAQM 646
>gi|332685817|ref|YP_004455591.1| DNA mismatch repair protein MutS [Melissococcus plutonius ATCC
35311]
gi|332369826|dbj|BAK20782.1| DNA mismatch repair protein MutS [Melissococcus plutonius ATCC
35311]
Length = 862
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCA---TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
+S +E +P G Q YIPN+ E + T LL+TGPNM GKST
Sbjct: 572 LSIVEGRHPVVEKVLGYQEYIPNNI-------------EMDSATTTLLITGPNMSGKSTY 618
Query: 211 MRQLGLITILAQM 223
MRQL L I+AQ+
Sbjct: 619 MRQLALTVIMAQI 631
>gi|317042804|gb|ADU88970.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042806|gb|ADU88971.1| DNA mismatch repair protein MutS [Streptococcus uberis]
Length = 226
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ + N+ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 149 GVQEYIPNTI-------------QFNQNTSIQLITGPNMSGKSTYMRQLALTVIMAQM 193
>gi|317042666|gb|ADU88901.1| DNA mismatch repair protein MutS [Streptococcus uberis]
Length = 226
Score = 49.7 bits (117), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ + N+ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 149 GVQEYIPNTI-------------QFNQNTSIQLITGPNMSGKSTYMRQLALTVIMAQM 193
>gi|384135168|ref|YP_005517882.1| DNA mismatch repair protein MutS [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
gi|339289253|gb|AEJ43363.1| DNA mismatch repair protein MutS [Alicyclobacillus acidocaldarius
subsp. acidocaldarius Tc-4-1]
Length = 867
Score = 49.7 bits (117), Expect = 9e-04, Method: Composition-based stats.
Identities = 22/28 (78%), Positives = 24/28 (85%)
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
++LLTGPNMGGKST MRQ LI ILAQM
Sbjct: 601 IVLLTGPNMGGKSTYMRQAALIAILAQM 628
>gi|148264432|ref|YP_001231138.1| DNA mismatch repair protein MutS [Geobacter uraniireducens Rf4]
gi|189030727|sp|A5G447.1|MUTS_GEOUR RecName: Full=DNA mismatch repair protein MutS
gi|146397932|gb|ABQ26565.1| DNA mismatch repair protein MutS [Geobacter uraniireducens Rf4]
Length = 872
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/95 (31%), Positives = 47/95 (49%), Gaps = 25/95 (26%)
Query: 135 YQQGVCVP------TFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGG 188
+++ C P T E HP I A+ + ++PN T++
Sbjct: 569 HERNYCRPLVDDGTTLFISEGRHPVIEAMHQ-------GERFVPNDTLLD---------- 611
Query: 189 EGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
N + ++++TGPNM GKST MRQ+ LIT++AQM
Sbjct: 612 --NGENQLIIITGPNMAGKSTFMRQVALITLMAQM 644
>gi|317042534|gb|ADU88835.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042536|gb|ADU88836.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042538|gb|ADU88837.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042540|gb|ADU88838.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042542|gb|ADU88839.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042544|gb|ADU88840.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042546|gb|ADU88841.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042548|gb|ADU88842.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042550|gb|ADU88843.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042552|gb|ADU88844.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042554|gb|ADU88845.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042556|gb|ADU88846.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042558|gb|ADU88847.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042560|gb|ADU88848.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042562|gb|ADU88849.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042564|gb|ADU88850.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042566|gb|ADU88851.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042568|gb|ADU88852.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042570|gb|ADU88853.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042572|gb|ADU88854.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042574|gb|ADU88855.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042576|gb|ADU88856.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042578|gb|ADU88857.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042580|gb|ADU88858.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042582|gb|ADU88859.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042584|gb|ADU88860.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042586|gb|ADU88861.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042588|gb|ADU88862.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042590|gb|ADU88863.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042592|gb|ADU88864.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042594|gb|ADU88865.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042596|gb|ADU88866.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042598|gb|ADU88867.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042600|gb|ADU88868.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042602|gb|ADU88869.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042604|gb|ADU88870.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042606|gb|ADU88871.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042610|gb|ADU88873.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042612|gb|ADU88874.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042614|gb|ADU88875.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042616|gb|ADU88876.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042618|gb|ADU88877.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042620|gb|ADU88878.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042622|gb|ADU88879.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042624|gb|ADU88880.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042626|gb|ADU88881.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042628|gb|ADU88882.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042630|gb|ADU88883.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042632|gb|ADU88884.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042634|gb|ADU88885.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042636|gb|ADU88886.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042638|gb|ADU88887.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042642|gb|ADU88889.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042644|gb|ADU88890.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042646|gb|ADU88891.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042648|gb|ADU88892.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042650|gb|ADU88893.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042652|gb|ADU88894.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042654|gb|ADU88895.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042656|gb|ADU88896.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042658|gb|ADU88897.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042660|gb|ADU88898.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042662|gb|ADU88899.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042664|gb|ADU88900.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042668|gb|ADU88902.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042670|gb|ADU88903.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042672|gb|ADU88904.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042676|gb|ADU88906.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042678|gb|ADU88907.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042680|gb|ADU88908.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042682|gb|ADU88909.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042684|gb|ADU88910.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042686|gb|ADU88911.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042688|gb|ADU88912.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042690|gb|ADU88913.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042692|gb|ADU88914.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042694|gb|ADU88915.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042696|gb|ADU88916.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042698|gb|ADU88917.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042700|gb|ADU88918.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042702|gb|ADU88919.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042704|gb|ADU88920.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042706|gb|ADU88921.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042708|gb|ADU88922.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042710|gb|ADU88923.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042712|gb|ADU88924.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042714|gb|ADU88925.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042716|gb|ADU88926.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042718|gb|ADU88927.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042720|gb|ADU88928.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042722|gb|ADU88929.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042724|gb|ADU88930.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042726|gb|ADU88931.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042728|gb|ADU88932.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042730|gb|ADU88933.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042732|gb|ADU88934.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042734|gb|ADU88935.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042736|gb|ADU88936.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042738|gb|ADU88937.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042740|gb|ADU88938.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042742|gb|ADU88939.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042744|gb|ADU88940.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042746|gb|ADU88941.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042748|gb|ADU88942.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042750|gb|ADU88943.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042752|gb|ADU88944.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042754|gb|ADU88945.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042756|gb|ADU88946.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042758|gb|ADU88947.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042760|gb|ADU88948.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042762|gb|ADU88949.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042764|gb|ADU88950.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042766|gb|ADU88951.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042768|gb|ADU88952.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042770|gb|ADU88953.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042772|gb|ADU88954.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042774|gb|ADU88955.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042776|gb|ADU88956.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042778|gb|ADU88957.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042780|gb|ADU88958.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042782|gb|ADU88959.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042784|gb|ADU88960.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042786|gb|ADU88961.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042788|gb|ADU88962.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042790|gb|ADU88963.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042792|gb|ADU88964.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042794|gb|ADU88965.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042796|gb|ADU88966.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042798|gb|ADU88967.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042800|gb|ADU88968.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042802|gb|ADU88969.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042808|gb|ADU88972.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042810|gb|ADU88973.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042812|gb|ADU88974.1| DNA mismatch repair protein MutS [Streptococcus uberis]
gi|317042814|gb|ADU88975.1| DNA mismatch repair protein MutS [Streptococcus uberis]
Length = 226
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ + N+ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 149 GVQEYIPNTI-------------QFNQNTSIQLITGPNMSGKSTYMRQLALTVIMAQM 193
>gi|431907876|gb|ELK11483.1| DNA mismatch repair protein Msh3 [Pteropus alecto]
Length = 1080
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I L G+Q Y+PNST + G+ R V+++TGPNMGGKS+
Sbjct: 809 HPVIDVL-------LGEQDQYVPNSTNLS---------GDSER---VMIITGPNMGGKSS 849
Query: 210 VMRQLGLITILAQM 223
++Q+ LITI+AQ+
Sbjct: 850 YIKQVALITIMAQI 863
>gi|421894542|ref|ZP_16325030.1| DNA mismatch repair protein MutS [Pediococcus pentosaceus IE-3]
gi|385272632|emb|CCG90402.1| DNA mismatch repair protein MutS [Pediococcus pentosaceus IE-3]
Length = 873
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+Y+PN D++ + +LL+TGPNM GKST MRQL L I+AQM
Sbjct: 587 GHQSYVPNDI-------DMDDNTD------ILLITGPNMSGKSTYMRQLALTVIMAQM 631
>gi|320527174|ref|ZP_08028361.1| DNA mismatch repair protein MutS [Solobacterium moorei F0204]
gi|320132502|gb|EFW25045.1| DNA mismatch repair protein MutS [Solobacterium moorei F0204]
Length = 839
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 22/40 (55%), Positives = 29/40 (72%)
Query: 184 VESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
V + + ++ +LL+TGPNMGGKST MRQ LI I+AQM
Sbjct: 584 VANSTDMHKDQDILLITGPNMGGKSTYMRQTALIVIMAQM 623
>gi|330790177|ref|XP_003283174.1| hypothetical protein DICPUDRAFT_52102 [Dictyostelium purpureum]
gi|325086855|gb|EGC40238.1| hypothetical protein DICPUDRAFT_52102 [Dictyostelium purpureum]
Length = 1030
Score = 49.7 bits (117), Expect = 9e-04, Method: Compositional matrix adjust.
Identities = 31/88 (35%), Positives = 42/88 (47%), Gaps = 18/88 (20%)
Query: 138 GVCVPTFLGLEEPHPYISALESLYPCATG--DQTYIPNSTVIGRCKEDVESGGEGNRKPT 195
G P F P I +E +P + TY+PNS + KE
Sbjct: 730 GYVKPEFTS----EPGIQVVEGRHPVVEVLLNGTYVPNSVKLSSNKE------------R 773
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
+++TGPNMGGKS+ +RQ LI I+AQM
Sbjct: 774 AMIITGPNMGGKSSFIRQTSLIVIMAQM 801
>gi|258405463|ref|YP_003198205.1| DNA mismatch repair protein MutS [Desulfohalobium retbaense DSM
5692]
gi|257797690|gb|ACV68627.1| DNA mismatch repair protein MutS [Desulfohalobium retbaense DSM
5692]
Length = 896
Score = 49.7 bits (117), Expect = 9e-04, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 39/73 (53%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + A + G YIPN I EG+ + VLL+TGPNM GKSTV
Sbjct: 592 HPAVEATQ-------GRTDYIPNDVRI-----------EGDDR--VLLITGPNMAGKSTV 631
Query: 211 MRQLGLITILAQM 223
+RQ +I ILAQ+
Sbjct: 632 LRQTAIICILAQI 644
>gi|407921660|gb|EKG14801.1| hypothetical protein MPH_08076 [Macrophomina phaseolina MS6]
Length = 1135
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 34/56 (60%), Gaps = 8/56 (14%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ Y+PN T + S + P LL+TGPNMGGKS+ +RQ+ LI I+AQ+
Sbjct: 902 EAYVPNDTHL--------SSTSSSGTPRALLITGPNMGGKSSFVRQVALICIMAQV 949
>gi|348508792|ref|XP_003441937.1| PREDICTED: DNA mismatch repair protein Msh2-like [Oreochromis
niloticus]
Length = 937
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 36/121 (29%), Positives = 58/121 (47%), Gaps = 22/121 (18%)
Query: 111 GVVDYKPQQSNNTIFSQRNILKDMYQQGVCVPT------FLGLEEPHPYISALESLYPCA 164
G VD P Q+ + + +Q + + V P F L+ + L++ +PC
Sbjct: 586 GYVD--PLQTLSDVIAQLDAMASFAVASVSAPVPFVRPRFRLLDHGCRRMELLQARHPCM 643
Query: 165 T--GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
D +IPN I +ED + ++TGPNMGGKST +RQ+G+I ++AQ
Sbjct: 644 EMDADTAFIPND--ISFVQED----------KSFYIITGPNMGGKSTFIRQVGVIALMAQ 691
Query: 223 M 223
+
Sbjct: 692 I 692
>gi|56419841|ref|YP_147159.1| DNA mismatch repair protein MutS [Geobacillus kaustophilus HTA426]
gi|81675852|sp|Q5L0E5.1|MUTS_GEOKA RecName: Full=DNA mismatch repair protein MutS
gi|56379683|dbj|BAD75591.1| DNA mismatch repair protein [Geobacillus kaustophilus HTA426]
Length = 896
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN + NR+ +LL+TGPNM GKST MRQ+ L ++AQ+
Sbjct: 577 GAQMYVPNDCYM-------------NREREMLLITGPNMAGKSTYMRQVALTAVMAQI 621
>gi|375008283|ref|YP_004981916.1| DNA mismatch repair protein mutS [Geobacillus thermoleovorans
CCB_US3_UF5]
gi|359287132|gb|AEV18816.1| DNA mismatch repair protein mutS [Geobacillus thermoleovorans
CCB_US3_UF5]
Length = 902
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN + NR+ +LL+TGPNM GKST MRQ+ L ++AQ+
Sbjct: 583 GAQMYVPNDCYM-------------NREREMLLITGPNMAGKSTYMRQVALTAVMAQI 627
>gi|297530518|ref|YP_003671793.1| DNA mismatch repair protein MutS [Geobacillus sp. C56-T3]
gi|297253770|gb|ADI27216.1| DNA mismatch repair protein MutS [Geobacillus sp. C56-T3]
Length = 903
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN + NR+ +LL+TGPNM GKST MRQ+ L ++AQ+
Sbjct: 584 GAQMYVPNDCYM-------------NREREMLLITGPNMAGKSTYMRQVALTAVMAQI 628
>gi|261419511|ref|YP_003253193.1| DNA mismatch repair protein MutS [Geobacillus sp. Y412MC61]
gi|319766326|ref|YP_004131827.1| DNA mismatch repair protein MutS [Geobacillus sp. Y412MC52]
gi|448237462|ref|YP_007401520.1| DNA mismatch repair protein [Geobacillus sp. GHH01]
gi|261375968|gb|ACX78711.1| DNA mismatch repair protein MutS [Geobacillus sp. Y412MC61]
gi|317111192|gb|ADU93684.1| DNA mismatch repair protein MutS [Geobacillus sp. Y412MC52]
gi|445206304|gb|AGE21769.1| DNA mismatch repair protein [Geobacillus sp. GHH01]
Length = 903
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN + NR+ +LL+TGPNM GKST MRQ+ L ++AQ+
Sbjct: 584 GAQMYVPNDCYM-------------NREREMLLITGPNMAGKSTYMRQVALTAVMAQI 628
>gi|84999622|ref|XP_954532.1| DNA mismatch repair protein, MutS family [Theileria annulata]
gi|65305530|emb|CAI73855.1| DNA mismatch repair protein, MutS family, putative [Theileria
annulata]
Length = 1279
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/67 (41%), Positives = 40/67 (59%), Gaps = 12/67 (17%)
Query: 158 ESLYPCAT-GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGL 216
+S+YP + +IPNS IG EG P +L++TGPNMGGKST++RQ+ L
Sbjct: 966 DSVYPIFNISNNKFIPNSVNIG----------EGLDGP-ILIITGPNMGGKSTLLRQIAL 1014
Query: 217 ITILAQM 223
I+ Q+
Sbjct: 1015 TIIMGQI 1021
>gi|365903634|ref|ZP_09441457.1| DNA mismatch repair protein MutS [Lactobacillus malefermentans KCTC
3548]
Length = 880
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+Y+PN + + + ++LL+TGPNM GKST MRQL L I+AQM
Sbjct: 591 GRQSYVPNDIRM-------------DPQTSILLITGPNMSGKSTYMRQLALTVIMAQM 635
>gi|224100189|ref|XP_002311781.1| predicted protein [Populus trichocarpa]
gi|222851601|gb|EEE89148.1| predicted protein [Populus trichocarpa]
Length = 931
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 50/102 (49%), Gaps = 19/102 (18%)
Query: 130 ILKDMYQQGVCVPTFLGL----EEPHPYISALESLYPC----ATGDQTYIPNSTVIGRCK 181
I Y+ C PT +G E P +SA +P + G ++PN
Sbjct: 769 IASGYYEGPACRPTIVGSSLSSEVQVPCLSAKLLGHPVLRSDSLGKGAFVPN-------- 820
Query: 182 EDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
D+ GG G +LLTGPNMGGKST++RQ+ L ILAQ+
Sbjct: 821 -DISIGGSGC--AGFILLTGPNMGGKSTLLRQVCLAVILAQI 859
>gi|410948910|ref|XP_003981170.1| PREDICTED: DNA mismatch repair protein Msh3 [Felis catus]
Length = 1126
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I L G+Q Y+PNST + G+ R V+++TGPNMGGKS+
Sbjct: 855 HPVIDVL-------LGEQDQYVPNSTNLS---------GDSER---VMIITGPNMGGKSS 895
Query: 210 VMRQLGLITILAQM 223
++Q+ LITI+AQ+
Sbjct: 896 YIKQVALITIMAQI 909
>gi|403380644|ref|ZP_10922701.1| DNA mismatch repair protein MutS [Paenibacillus sp. JC66]
Length = 961
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 26/57 (45%), Positives = 37/57 (64%), Gaps = 12/57 (21%)
Query: 167 DQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+Q+++ N TV+ + NR VLL+TGPNM GKST MRQ+ +I+I+AQM
Sbjct: 614 EQSFVANDTVMEM---------DTNR---VLLITGPNMAGKSTYMRQVAMISIMAQM 658
>gi|302811241|ref|XP_002987310.1| hypothetical protein SELMODRAFT_125776 [Selaginella moellendorffii]
gi|300144945|gb|EFJ11625.1| hypothetical protein SELMODRAFT_125776 [Selaginella moellendorffii]
Length = 932
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Query: 140 CVPTFLGLEEPHPYISALESLYPCATGDQ--TYIPNSTVIGRCKEDVESGGEGNRKPTVL 197
C PTF+ ++ + +P A T++PN +G KP +
Sbjct: 644 CRPTFVAADQGVAVLEMQGLWHPFAAAGMGGTFVPNDIALGL------------GKPRAI 691
Query: 198 LLTGPNMGGKSTVMRQLGLITILAQM 223
LLTGPNMGGKST++R + T++AQ+
Sbjct: 692 LLTGPNMGGKSTLLRATCVATLMAQL 717
>gi|302814979|ref|XP_002989172.1| hypothetical protein SELMODRAFT_129323 [Selaginella moellendorffii]
gi|300143072|gb|EFJ09766.1| hypothetical protein SELMODRAFT_129323 [Selaginella moellendorffii]
Length = 932
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 28/86 (32%), Positives = 43/86 (50%), Gaps = 14/86 (16%)
Query: 140 CVPTFLGLEEPHPYISALESLYPCATGDQ--TYIPNSTVIGRCKEDVESGGEGNRKPTVL 197
C PTF+ ++ + +P A T++PN +G KP +
Sbjct: 644 CRPTFVAADQGVAVLEMQGLWHPFAAAGMGGTFVPNDIALGL------------GKPRAI 691
Query: 198 LLTGPNMGGKSTVMRQLGLITILAQM 223
LLTGPNMGGKST++R + T++AQ+
Sbjct: 692 LLTGPNMGGKSTLLRATCVATLMAQL 717
>gi|392988094|ref|YP_006486687.1| DNA mismatch repair protein MutS [Enterococcus hirae ATCC 9790]
gi|392335514|gb|AFM69796.1| DNA mismatch repair protein MutS [Enterococcus hirae ATCC 9790]
Length = 870
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 28/58 (48%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS + ED +LL+TGPNM GKST MRQL L ++AQM
Sbjct: 587 GHQEYIPNSVDMA---ED----------EMILLITGPNMSGKSTYMRQLALTVLMAQM 631
>gi|390334498|ref|XP_001193092.2| PREDICTED: DNA mismatch repair protein Msh3-like [Strongylocentrotus
purpuratus]
Length = 1242
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 44/73 (60%), Gaps = 18/73 (24%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP +S L+ A GDQ Y+PN T I +V+ +++TGPNMGGKS+
Sbjct: 981 HPVVSTLK-----ADGDQ-YVPNDTSI-----NVDG-------LNCMIITGPNMGGKSSY 1022
Query: 211 MRQLGLITILAQM 223
++Q+ LITI+AQ+
Sbjct: 1023 IKQVALITIMAQL 1035
>gi|342164735|ref|YP_004769374.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
IS7493]
gi|341934617|gb|AEL11514.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
IS7493]
Length = 844
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPN+ + ED ++ L+TGPNM GKST MRQL + ++AQM
Sbjct: 580 GAQTYIPNTIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAVMAQM 624
>gi|120602482|ref|YP_966882.1| DNA mismatch repair protein MutS [Desulfovibrio vulgaris DP4]
gi|166232120|sp|A1VDD9.1|MUTS_DESVV RecName: Full=DNA mismatch repair protein MutS
gi|120562711|gb|ABM28455.1| DNA mismatch repair protein MutS [Desulfovibrio vulgaris DP4]
Length = 905
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 20/76 (26%)
Query: 148 EEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGK 207
E HP + A++ G +++PN + + K +LL+TGPNM GK
Sbjct: 605 EGRHPVVEAMQ-------GSASFVPNDLRM-------------DEKRRLLLITGPNMAGK 644
Query: 208 STVMRQLGLITILAQM 223
STV+RQ +I +LAQM
Sbjct: 645 STVLRQTAIICLLAQM 660
>gi|366087626|ref|ZP_09454111.1| DNA mismatch repair protein MutS [Lactobacillus zeae KCTC 3804]
Length = 857
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 33/57 (57%), Gaps = 13/57 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
G +YIPN ++ ++ +LL+TGPNM GKST MRQL LI I+AQ
Sbjct: 586 GQDSYIPNDVIM-------------DQDTDMLLITGPNMSGKSTYMRQLALIVIMAQ 629
>gi|46580059|ref|YP_010867.1| DNA mismatch repair protein MutS [Desulfovibrio vulgaris str.
Hildenborough]
gi|387153497|ref|YP_005702433.1| DNA mismatch repair protein MutS [Desulfovibrio vulgaris RCH1]
gi|48428287|sp|P61666.1|MUTS_DESVH RecName: Full=DNA mismatch repair protein MutS
gi|46449475|gb|AAS96126.1| DNA mismatch repair protein MutS [Desulfovibrio vulgaris str.
Hildenborough]
gi|311233941|gb|ADP86795.1| DNA mismatch repair protein MutS [Desulfovibrio vulgaris RCH1]
Length = 905
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 40/76 (52%), Gaps = 20/76 (26%)
Query: 148 EEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGK 207
E HP + A++ G +++PN + + K +LL+TGPNM GK
Sbjct: 605 EGRHPVVEAMQ-------GSASFVPNDLRM-------------DEKRRLLLITGPNMAGK 644
Query: 208 STVMRQLGLITILAQM 223
STV+RQ +I +LAQM
Sbjct: 645 STVLRQTAIICLLAQM 660
>gi|87122440|ref|ZP_01078320.1| DNA mismatch repair protein MutS [Marinomonas sp. MED121]
gi|86162233|gb|EAQ63518.1| DNA mismatch repair protein MutS [Marinomonas sp. MED121]
Length = 868
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 15/76 (19%)
Query: 149 EPHPYISALESLYPCATG--DQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGG 206
E P I LE +P + +IPN ++ + + ++L++TGPNMGG
Sbjct: 578 EDKPGIEILEGRHPVVESVITEPFIPNDLIM-------------SPERSLLMITGPNMGG 624
Query: 207 KSTVMRQLGLITILAQ 222
KST MRQ+ LIT+LA
Sbjct: 625 KSTYMRQIALITLLAH 640
>gi|444729598|gb|ELW70009.1| DNA mismatch repair protein Msh3 [Tupaia chinensis]
Length = 901
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I L G+Q Y+PNST + G+ R V+++TGPNMGGKS+
Sbjct: 628 HPVIDML-------LGEQDQYVPNSTNLS---------GDSER---VMIITGPNMGGKSS 668
Query: 210 VMRQLGLITILAQM 223
++Q+ LITI+AQ+
Sbjct: 669 YIKQVALITIMAQI 682
>gi|47207948|emb|CAG07091.1| unnamed protein product [Tetraodon nigroviridis]
Length = 129
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/106 (27%), Positives = 61/106 (57%), Gaps = 5/106 (4%)
Query: 35 ISKTVDQDTDADMWRESAFFLRKTRYLCVSK---TESLFQIDYIVENICIINEKETPPDG 91
++KT D +DAD+W++ F + TRYLC ++ +E++ +V ++ +I+ K+ P+G
Sbjct: 1 VAKTTDG-SDADLWKDGIFKSKVTRYLCFTRENVSENVNSRPDVVVDMRLIDAKDVLPEG 59
Query: 92 FCLIARTLDSDQGQICERGGVVDYKPQQSNNT-IFSQRNILKDMYQ 136
F + +T+D+++ + +R V P+ + T ++ + K YQ
Sbjct: 60 FTPVEKTMDTNETAMRKRRLCVKTSPRATAKTAVYDIQATAKSKYQ 105
>gi|357639667|ref|ZP_09137540.1| DNA mismatch repair protein MutS [Streptococcus urinalis 2285-97]
gi|418416981|ref|ZP_12990179.1| DNA mismatch repair protein mutS [Streptococcus urinalis
FB127-CNA-2]
gi|357588121|gb|EHJ57529.1| DNA mismatch repair protein MutS [Streptococcus urinalis 2285-97]
gi|410873037|gb|EKS20973.1| DNA mismatch repair protein mutS [Streptococcus urinalis
FB127-CNA-2]
Length = 851
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCA---TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
IS ++ +P G Q YIPN +R+ + L+TGPNM GKST
Sbjct: 565 ISIIDGKHPVVEKVMGTQEYIPNDICF-------------DRETNIQLITGPNMSGKSTY 611
Query: 211 MRQLGLITILAQM 223
MRQL L ++AQM
Sbjct: 612 MRQLALTVVMAQM 624
>gi|332224846|ref|XP_003261579.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh3
[Nomascus leucogenys]
Length = 1125
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I L G+Q Y+PNST + ED E V+++TGPNMGGKS+
Sbjct: 852 HPVIDVL-------LGEQDQYVPNSTDLS---EDSER---------VMIITGPNMGGKSS 892
Query: 210 VMRQLGLITILAQM 223
++Q+ LITI+AQ+
Sbjct: 893 YIKQVALITIMAQI 906
>gi|427719425|ref|YP_007067419.1| DNA mismatch repair protein MutS [Calothrix sp. PCC 7507]
gi|427351861|gb|AFY34585.1| DNA mismatch repair protein MutS [Calothrix sp. PCC 7507]
Length = 863
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 45/93 (48%), Gaps = 13/93 (13%)
Query: 136 QQGVCVPTFLGLEE------PHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGE 189
QG C P L E HP + E P ++PNST +G+ +
Sbjct: 603 HQGYCRPEMLVGREIGIVDGRHPVV---EQSLPAGF----FVPNSTQLGQESLTNDQRQM 655
Query: 190 GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
N P +++LTGPN GKS +RQ+GLI ++AQ
Sbjct: 656 TNDNPDLIILTGPNASGKSCYLRQVGLIQLMAQ 688
>gi|326803738|ref|YP_004321556.1| DNA mismatch repair protein MutS [Aerococcus urinae
ACS-120-V-Col10a]
gi|326650969|gb|AEA01152.1| DNA mismatch repair protein MutS [Aerococcus urinae
ACS-120-V-Col10a]
Length = 855
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G ++PN ++ ++ +LL+TGPNM GKST MRQLGL I+AQM
Sbjct: 587 GRDDFVPNDIIM-------------DKDTCILLITGPNMSGKSTYMRQLGLTVIMAQM 631
>gi|313574723|emb|CBX26214.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
Length = 439
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
S EG + + LLTGPNMGGKST +RQ LI ILAQ+
Sbjct: 298 SATEGGKNGAIWLLTGPNMGGKSTFLRQNALIAILAQI 335
>gi|345019807|ref|ZP_08783420.1| DNA mismatch repair protein MutS [Ornithinibacillus scapharcae
TW25]
Length = 867
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 35/57 (61%), Gaps = 13/57 (22%)
Query: 167 DQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
D T++PN DVE + K ++LL+TGPNM GKST MRQL LI I+ Q+
Sbjct: 585 DGTFVPN---------DVEL----DEKKSMLLITGPNMSGKSTYMRQLALIAIMGQV 628
>gi|303248020|ref|ZP_07334286.1| DNA mismatch repair protein MutS [Desulfovibrio fructosovorans JJ]
gi|302490577|gb|EFL50482.1| DNA mismatch repair protein MutS [Desulfovibrio fructosovorans JJ]
Length = 879
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 38/73 (52%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP I A++ G YIPN + E R VLL+TGPNM GKSTV
Sbjct: 585 HPVIEAVQ-------GVGNYIPNDVTLD----------EATR---VLLITGPNMAGKSTV 624
Query: 211 MRQLGLITILAQM 223
+RQ +I +LAQ+
Sbjct: 625 LRQTAIIALLAQI 637
>gi|449964622|ref|ZP_21811410.1| DNA mismatch repair protein MutS [Streptococcus mutans 15VF2]
gi|449172346|gb|EMB74976.1| DNA mismatch repair protein MutS [Streptococcus mutans 15VF2]
Length = 849
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|126321607|ref|XP_001369923.1| PREDICTED: DNA mismatch repair protein Msh3-like [Monodelphis
domestica]
Length = 1236
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I L G+Q Y+PNST + G+ R V+++TGPNMGGKS+
Sbjct: 934 HPVIDML-------LGEQDQYVPNSTYLS---------GDSER---VMIITGPNMGGKSS 974
Query: 210 VMRQLGLITILAQM 223
++Q+ LITI+AQ+
Sbjct: 975 YIKQVALITIMAQI 988
>gi|313574721|emb|CBX26213.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
Length = 439
Score = 49.7 bits (117), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
S EG + + LLTGPNMGGKST +RQ LI ILAQ+
Sbjct: 298 SATEGGKNGAIWLLTGPNMGGKSTFLRQNALIAILAQI 335
>gi|449911081|ref|ZP_21795000.1| DNA mismatch repair protein MutS [Streptococcus mutans OMZ175]
gi|449258712|gb|EMC56276.1| DNA mismatch repair protein MutS [Streptococcus mutans OMZ175]
Length = 849
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|450034423|ref|ZP_21834378.1| DNA mismatch repair protein MutS [Streptococcus mutans M21]
gi|450110638|ref|ZP_21862212.1| DNA mismatch repair protein MutS [Streptococcus mutans SM6]
gi|449196526|gb|EMB97791.1| DNA mismatch repair protein MutS [Streptococcus mutans M21]
gi|449224638|gb|EMC24264.1| DNA mismatch repair protein MutS [Streptococcus mutans SM6]
Length = 849
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|449943285|ref|ZP_21806343.1| DNA mismatch repair protein MutS [Streptococcus mutans 11A1]
gi|449149448|gb|EMB53250.1| DNA mismatch repair protein MutS [Streptococcus mutans 11A1]
Length = 849
Score = 49.7 bits (117), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|450174687|ref|ZP_21884718.1| DNA mismatch repair protein MutS [Streptococcus mutans SM1]
gi|449248143|gb|EMC46404.1| DNA mismatch repair protein MutS [Streptococcus mutans SM1]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|450088206|ref|ZP_21854685.1| DNA mismatch repair protein MutS [Streptococcus mutans NV1996]
gi|449216755|gb|EMC16847.1| DNA mismatch repair protein MutS [Streptococcus mutans NV1996]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|450072842|ref|ZP_21848815.1| DNA mismatch repair protein MutS [Streptococcus mutans M2A]
gi|449210723|gb|EMC11158.1| DNA mismatch repair protein MutS [Streptococcus mutans M2A]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|449876159|ref|ZP_21782633.1| DNA mismatch repair protein MutS [Streptococcus mutans S1B]
gi|449904938|ref|ZP_21792938.1| DNA mismatch repair protein MutS [Streptococcus mutans M230]
gi|449973522|ref|ZP_21814762.1| DNA mismatch repair protein MutS [Streptococcus mutans 11VS1]
gi|449179451|gb|EMB81662.1| DNA mismatch repair protein MutS [Streptococcus mutans 11VS1]
gi|449252967|gb|EMC50934.1| DNA mismatch repair protein MutS [Streptococcus mutans S1B]
gi|449258777|gb|EMC56337.1| DNA mismatch repair protein MutS [Streptococcus mutans M230]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|449919045|ref|ZP_21797681.1| DNA mismatch repair protein MutS [Streptococcus mutans 1SM1]
gi|449159742|gb|EMB63054.1| DNA mismatch repair protein MutS [Streptococcus mutans 1SM1]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|440682554|ref|YP_007157349.1| DNA mismatch repair protein MutS [Anabaena cylindrica PCC 7122]
gi|428679673|gb|AFZ58439.1| DNA mismatch repair protein MutS [Anabaena cylindrica PCC 7122]
Length = 859
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 15/95 (15%)
Query: 136 QQGVCVPTFLGLEEPHPYISALESLYPCATGDQT-----YIPNSTVIGRCKEDVESGGEG 190
QG C P L E I ++ +P +Q+ ++PNST +G E G E
Sbjct: 599 HQGYCRPEMLAGRE----IEVVDGRHPVV--EQSLPAGFFVPNSTGLG--GETNREGAED 650
Query: 191 NR--KPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
KP +++LTGPN GKS +RQ+GLI ++AQ+
Sbjct: 651 TEGEKPDLVILTGPNASGKSCYLRQVGLIQLMAQV 685
>gi|397650621|ref|YP_006491148.1| DNA mismatch repair protein MutS [Streptococcus mutans GS-5]
gi|449955937|ref|ZP_21809353.1| DNA mismatch repair protein MutS [Streptococcus mutans 4VF1]
gi|449994773|ref|ZP_21822700.1| DNA mismatch repair protein MutS [Streptococcus mutans A9]
gi|450120898|ref|ZP_21865985.1| DNA mismatch repair protein MutS [Streptococcus mutans ST6]
gi|450127820|ref|ZP_21868765.1| DNA mismatch repair protein MutS [Streptococcus mutans U2A]
gi|450139692|ref|ZP_21872619.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML1]
gi|392604190|gb|AFM82354.1| DNA mismatch repair protein MutS [Streptococcus mutans GS-5]
gi|449170870|gb|EMB73560.1| DNA mismatch repair protein MutS [Streptococcus mutans 4VF1]
gi|449184933|gb|EMB86842.1| DNA mismatch repair protein MutS [Streptococcus mutans A9]
gi|449229792|gb|EMC29087.1| DNA mismatch repair protein MutS [Streptococcus mutans ST6]
gi|449230235|gb|EMC29502.1| DNA mismatch repair protein MutS [Streptococcus mutans U2A]
gi|449232637|gb|EMC31740.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML1]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|387787015|ref|YP_006252111.1| DNA mismatch repair protein [Streptococcus mutans LJ23]
gi|379133416|dbj|BAL70168.1| DNA mismatch repair protein [Streptococcus mutans LJ23]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|257088271|ref|ZP_05582632.1| MutS 1 protein [Enterococcus faecalis D6]
gi|422723501|ref|ZP_16780036.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX2137]
gi|256996301|gb|EEU83603.1| MutS 1 protein [Enterococcus faecalis D6]
gi|315026534|gb|EFT38466.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX2137]
Length = 858
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCAT---GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
++ +E +P G Q YIPNS + N + +LL+TGPNM GKST
Sbjct: 572 LAIVEGRHPVVEKVLGHQEYIPNSIRM-------------NPETDILLITGPNMSGKSTY 618
Query: 211 MRQLGLITILAQM 223
MRQL L ++AQ+
Sbjct: 619 MRQLALTVVMAQI 631
>gi|290581355|ref|YP_003485747.1| DNA mismatch repair protein [Streptococcus mutans NN2025]
gi|449864684|ref|ZP_21778542.1| DNA mismatch repair protein MutS [Streptococcus mutans U2B]
gi|449869471|ref|ZP_21780118.1| DNA mismatch repair protein MutS [Streptococcus mutans 8ID3]
gi|449932949|ref|ZP_21803054.1| DNA mismatch repair protein MutS [Streptococcus mutans 3SN1]
gi|450005598|ref|ZP_21826759.1| DNA mismatch repair protein MutS [Streptococcus mutans NMT4863]
gi|450030663|ref|ZP_21833354.1| DNA mismatch repair protein MutS [Streptococcus mutans G123]
gi|450051790|ref|ZP_21841027.1| DNA mismatch repair protein MutS [Streptococcus mutans NFSM1]
gi|450058934|ref|ZP_21843297.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML4]
gi|450068238|ref|ZP_21847049.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML9]
gi|450092543|ref|ZP_21856048.1| DNA mismatch repair protein MutS [Streptococcus mutans W6]
gi|450100399|ref|ZP_21858755.1| DNA mismatch repair protein MutS [Streptococcus mutans SF1]
gi|450116656|ref|ZP_21864596.1| DNA mismatch repair protein MutS [Streptococcus mutans ST1]
gi|450149199|ref|ZP_21876037.1| DNA mismatch repair protein MutS [Streptococcus mutans 14D]
gi|450164012|ref|ZP_21881083.1| DNA mismatch repair protein MutS [Streptococcus mutans B]
gi|450171968|ref|ZP_21884324.1| DNA mismatch repair protein MutS [Streptococcus mutans SM4]
gi|254998254|dbj|BAH88855.1| DNA mismatch repair protein [Streptococcus mutans NN2025]
gi|449158184|gb|EMB61606.1| DNA mismatch repair protein MutS [Streptococcus mutans 8ID3]
gi|449160796|gb|EMB64037.1| DNA mismatch repair protein MutS [Streptococcus mutans 3SN1]
gi|449188389|gb|EMB90101.1| DNA mismatch repair protein MutS [Streptococcus mutans NMT4863]
gi|449192615|gb|EMB94030.1| DNA mismatch repair protein MutS [Streptococcus mutans G123]
gi|449201604|gb|EMC02594.1| DNA mismatch repair protein MutS [Streptococcus mutans NFSM1]
gi|449203589|gb|EMC04446.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML4]
gi|449207233|gb|EMC07911.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML9]
gi|449218096|gb|EMC18118.1| DNA mismatch repair protein MutS [Streptococcus mutans W6]
gi|449220472|gb|EMC20342.1| DNA mismatch repair protein MutS [Streptococcus mutans SF1]
gi|449226760|gb|EMC26251.1| DNA mismatch repair protein MutS [Streptococcus mutans ST1]
gi|449234922|gb|EMC33908.1| DNA mismatch repair protein MutS [Streptococcus mutans 14D]
gi|449242469|gb|EMC41055.1| DNA mismatch repair protein MutS [Streptococcus mutans B]
gi|449243285|gb|EMC41730.1| DNA mismatch repair protein MutS [Streptococcus mutans SM4]
gi|449264755|gb|EMC62090.1| DNA mismatch repair protein MutS [Streptococcus mutans U2B]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|424759108|ref|ZP_18186781.1| DNA mismatch repair protein MutS [Enterococcus faecalis R508]
gi|402405080|gb|EJV37681.1| DNA mismatch repair protein MutS [Enterococcus faecalis R508]
Length = 858
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCAT---GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
++ +E +P G Q YIPNS + N + +LL+TGPNM GKST
Sbjct: 572 LAIVEGRHPVVEKVLGHQEYIPNSIRM-------------NPETDILLITGPNMSGKSTY 618
Query: 211 MRQLGLITILAQM 223
MRQL L ++AQ+
Sbjct: 619 MRQLALTVVMAQI 631
>gi|307288398|ref|ZP_07568389.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0109]
gi|422704143|ref|ZP_16761958.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX1302]
gi|306500630|gb|EFM69956.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0109]
gi|315164365|gb|EFU08382.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX1302]
Length = 858
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCAT---GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
++ +E +P G Q YIPNS + N + +LL+TGPNM GKST
Sbjct: 572 LAIVEGRHPVVEKVLGHQEYIPNSIRM-------------NPETDILLITGPNMSGKSTY 618
Query: 211 MRQLGLITILAQM 223
MRQL L ++AQ+
Sbjct: 619 MRQLALTVVMAQI 631
>gi|295114467|emb|CBL33104.1| DNA mismatch repair protein MutS [Enterococcus sp. 7L76]
Length = 858
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS + N + +LL+TGPNM GKST MRQL L ++AQ+
Sbjct: 587 GHQEYIPNSIRM-------------NPETDILLITGPNMSGKSTYMRQLALTVVMAQI 631
>gi|257083163|ref|ZP_05577524.1| MutS 1 protein [Enterococcus faecalis Fly1]
gi|256991193|gb|EEU78495.1| MutS 1 protein [Enterococcus faecalis Fly1]
Length = 858
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS + N + +LL+TGPNM GKST MRQL L ++AQ+
Sbjct: 587 GHQEYIPNSIRM-------------NPETDILLITGPNMSGKSTYMRQLALTVVMAQI 631
>gi|256960507|ref|ZP_05564678.1| MutS 1 protein [Enterococcus faecalis Merz96]
gi|293385298|ref|ZP_06631114.1| DNA mismatch repair protein MutS [Enterococcus faecalis R712]
gi|293389689|ref|ZP_06634133.1| DNA mismatch repair protein MutS [Enterococcus faecalis S613]
gi|312906649|ref|ZP_07765649.1| DNA mismatch repair protein MutS [Enterococcus faecalis DAPTO 512]
gi|312910891|ref|ZP_07769726.1| DNA mismatch repair protein MutS [Enterococcus faecalis DAPTO 516]
gi|256951003|gb|EEU67635.1| MutS 1 protein [Enterococcus faecalis Merz96]
gi|291077498|gb|EFE14862.1| DNA mismatch repair protein MutS [Enterococcus faecalis R712]
gi|291080936|gb|EFE17899.1| DNA mismatch repair protein MutS [Enterococcus faecalis S613]
gi|310627297|gb|EFQ10580.1| DNA mismatch repair protein MutS [Enterococcus faecalis DAPTO 512]
gi|311288759|gb|EFQ67315.1| DNA mismatch repair protein MutS [Enterococcus faecalis DAPTO 516]
Length = 858
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCAT---GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
++ +E +P G Q YIPNS + N + +LL+TGPNM GKST
Sbjct: 572 LAIVEGRHPVVEKVLGHQEYIPNSIRM-------------NPETDILLITGPNMSGKSTY 618
Query: 211 MRQLGLITILAQM 223
MRQL L ++AQ+
Sbjct: 619 MRQLALTVVMAQI 631
>gi|229547980|ref|ZP_04436705.1| DNA mismatch repair protein [Enterococcus faecalis ATCC 29200]
gi|257091402|ref|ZP_05585763.1| MutS 1 protein [Enterococcus faecalis CH188]
gi|307276607|ref|ZP_07557725.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX2134]
gi|312905470|ref|ZP_07764584.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0635]
gi|422689908|ref|ZP_16747998.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0630]
gi|422700396|ref|ZP_16758243.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX1342]
gi|422732765|ref|ZP_16789094.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0645]
gi|229306856|gb|EEN72852.1| DNA mismatch repair protein [Enterococcus faecalis ATCC 29200]
gi|257000214|gb|EEU86734.1| MutS 1 protein [Enterococcus faecalis CH188]
gi|306506717|gb|EFM75869.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX2134]
gi|310631199|gb|EFQ14482.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0635]
gi|315161299|gb|EFU05316.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0645]
gi|315171154|gb|EFU15171.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX1342]
gi|315577076|gb|EFU89267.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0630]
Length = 858
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCAT---GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
++ +E +P G Q YIPNS + N + +LL+TGPNM GKST
Sbjct: 572 LAIVEGRHPVVEKVLGHQEYIPNSIRM-------------NPETDILLITGPNMSGKSTY 618
Query: 211 MRQLGLITILAQM 223
MRQL L ++AQ+
Sbjct: 619 MRQLALTVVMAQI 631
>gi|152997735|ref|YP_001342570.1| DNA mismatch repair protein MutS [Marinomonas sp. MWYL1]
gi|189083158|sp|A6W1Q6.1|MUTS_MARMS RecName: Full=DNA mismatch repair protein MutS
gi|150838659|gb|ABR72635.1| DNA mismatch repair protein MutS [Marinomonas sp. MWYL1]
Length = 883
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 21/32 (65%), Positives = 27/32 (84%)
Query: 191 NRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
N K ++L++TGPNMGGKST MRQ+ LIT+LA
Sbjct: 609 NDKRSLLMITGPNMGGKSTYMRQIALITLLAH 640
>gi|449883047|ref|ZP_21784906.1| DNA mismatch repair protein MutS [Streptococcus mutans SA38]
gi|449250298|gb|EMC48364.1| DNA mismatch repair protein MutS [Streptococcus mutans SA38]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|450064170|ref|ZP_21845291.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML5]
gi|449203955|gb|EMC04786.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML5]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|450010873|ref|ZP_21828835.1| DNA mismatch repair protein MutS [Streptococcus mutans A19]
gi|450023558|ref|ZP_21830673.1| DNA mismatch repair protein MutS [Streptococcus mutans U138]
gi|449189860|gb|EMB91480.1| DNA mismatch repair protein MutS [Streptococcus mutans A19]
gi|449193165|gb|EMB94556.1| DNA mismatch repair protein MutS [Streptococcus mutans U138]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|449999923|ref|ZP_21824798.1| DNA mismatch repair protein MutS [Streptococcus mutans N29]
gi|449186343|gb|EMB88178.1| DNA mismatch repair protein MutS [Streptococcus mutans N29]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|449969184|ref|ZP_21813059.1| DNA mismatch repair protein MutS [Streptococcus mutans 2VS1]
gi|449174304|gb|EMB76798.1| DNA mismatch repair protein MutS [Streptococcus mutans 2VS1]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|449947081|ref|ZP_21807192.1| DNA mismatch repair protein MutS [Streptococcus mutans 11SSST2]
gi|449169045|gb|EMB71834.1| DNA mismatch repair protein MutS [Streptococcus mutans 11SSST2]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|449924910|ref|ZP_21799951.1| DNA mismatch repair protein MutS [Streptococcus mutans 4SM1]
gi|449162202|gb|EMB65354.1| DNA mismatch repair protein MutS [Streptococcus mutans 4SM1]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|450106968|ref|ZP_21860781.1| DNA mismatch repair protein MutS [Streptococcus mutans SF14]
gi|450132413|ref|ZP_21870043.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML8]
gi|449153190|gb|EMB56878.1| DNA mismatch repair protein MutS [Streptococcus mutans NLML8]
gi|449222661|gb|EMC22380.1| DNA mismatch repair protein MutS [Streptococcus mutans SF14]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|450144043|ref|ZP_21873792.1| DNA mismatch repair protein MutS [Streptococcus mutans 1ID3]
gi|450159299|ref|ZP_21879377.1| DNA mismatch repair protein MutS [Streptococcus mutans 66-2A]
gi|449151249|gb|EMB54990.1| DNA mismatch repair protein MutS [Streptococcus mutans 1ID3]
gi|449241416|gb|EMC40048.1| DNA mismatch repair protein MutS [Streptococcus mutans 66-2A]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|403667539|ref|ZP_10932844.1| DNA mismatch repair protein [Kurthia sp. JC8E]
Length = 883
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/55 (45%), Positives = 34/55 (61%), Gaps = 13/55 (23%)
Query: 169 TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
TY+PN ++ ED ++L+TGPNM GKST MRQ+ LIT++AQM
Sbjct: 579 TYVPNDCILS---ED----------ENMMLITGPNMSGKSTYMRQVALITVMAQM 620
>gi|257417288|ref|ZP_05594282.1| MutS 1 protein [Enterococcus faecalis ARO1/DG]
gi|257159116|gb|EEU89076.1| MutS 1 protein [Enterococcus faecalis ARO1/DG]
Length = 858
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCAT---GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
++ +E +P G Q YIPNS + N + +LL+TGPNM GKST
Sbjct: 572 LAIVEGRHPVVEKVLGHQEYIPNSIRM-------------NPETDILLITGPNMSGKSTY 618
Query: 211 MRQLGLITILAQM 223
MRQL L ++AQ+
Sbjct: 619 MRQLALTVVMAQI 631
>gi|255970641|ref|ZP_05421227.1| DNA mismatch repair protein [Enterococcus faecalis T1]
gi|256761015|ref|ZP_05501595.1| DNA mismatch repair protein [Enterococcus faecalis T3]
gi|256963000|ref|ZP_05567171.1| MutS 1 protein [Enterococcus faecalis HIP11704]
gi|300861636|ref|ZP_07107720.1| DNA mismatch repair protein MutS [Enterococcus faecalis TUSoD Ef11]
gi|307273665|ref|ZP_07554893.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0855]
gi|307292185|ref|ZP_07572050.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0411]
gi|312953268|ref|ZP_07772113.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0102]
gi|384514399|ref|YP_005709492.1| DNA mismatch repair protein MutS [Enterococcus faecalis OG1RF]
gi|422692479|ref|ZP_16750500.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0031]
gi|422698554|ref|ZP_16756446.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX1346]
gi|422725490|ref|ZP_16781950.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0312]
gi|422728631|ref|ZP_16785039.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0012]
gi|422740015|ref|ZP_16795172.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX2141]
gi|424673543|ref|ZP_18110484.1| DNA mismatch repair protein MutS [Enterococcus faecalis 599]
gi|428768272|ref|YP_007154383.1| DNA mismatch repair protein, mutS2 family [Enterococcus faecalis
str. Symbioflor 1]
gi|430361212|ref|ZP_19426552.1| DNA mismatch repair protein [Enterococcus faecalis OG1X]
gi|430372320|ref|ZP_19429707.1| hypothetical protein EFM7_2494 [Enterococcus faecalis M7]
gi|255961659|gb|EET94135.1| DNA mismatch repair protein [Enterococcus faecalis T1]
gi|256682266|gb|EEU21961.1| DNA mismatch repair protein [Enterococcus faecalis T3]
gi|256953496|gb|EEU70128.1| MutS 1 protein [Enterococcus faecalis HIP11704]
gi|300849097|gb|EFK76850.1| DNA mismatch repair protein MutS [Enterococcus faecalis TUSoD Ef11]
gi|306496760|gb|EFM66312.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0411]
gi|306509678|gb|EFM78720.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0855]
gi|310628805|gb|EFQ12088.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0102]
gi|315144208|gb|EFT88224.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX2141]
gi|315150785|gb|EFT94801.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0012]
gi|315152838|gb|EFT96854.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0031]
gi|315159533|gb|EFU03550.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0312]
gi|315172874|gb|EFU16891.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX1346]
gi|327536288|gb|AEA95122.1| DNA mismatch repair protein MutS [Enterococcus faecalis OG1RF]
gi|402352226|gb|EJU87079.1| DNA mismatch repair protein MutS [Enterococcus faecalis 599]
gi|427186445|emb|CCO73669.1| DNA mismatch repair protein, mutS2 family [Enterococcus faecalis
str. Symbioflor 1]
gi|429512560|gb|ELA02164.1| DNA mismatch repair protein [Enterococcus faecalis OG1X]
gi|429514664|gb|ELA04201.1| hypothetical protein EFM7_2494 [Enterococcus faecalis M7]
Length = 858
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCAT---GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
++ +E +P G Q YIPNS + N + +LL+TGPNM GKST
Sbjct: 572 LAIVEGRHPVVEKVLGHQEYIPNSIRM-------------NPETDILLITGPNMSGKSTY 618
Query: 211 MRQLGLITILAQM 223
MRQL L ++AQ+
Sbjct: 619 MRQLALTVVMAQI 631
>gi|149727014|ref|XP_001503905.1| PREDICTED: DNA mismatch repair protein Msh3 [Equus caballus]
Length = 1128
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I L G+Q Y+PNST + G+ R V+++TGPNMGGKS+
Sbjct: 856 HPVIDVL-------LGEQDQYVPNSTNLS---------GDSER---VMIITGPNMGGKSS 896
Query: 210 VMRQLGLITILAQM 223
++Q+ LIT++AQ+
Sbjct: 897 YIKQVALITVMAQI 910
>gi|449893954|ref|ZP_21789009.1| DNA mismatch repair protein MutS [Streptococcus mutans SF12]
gi|449255571|gb|EMC53419.1| DNA mismatch repair protein MutS [Streptococcus mutans SF12]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|255974225|ref|ZP_05424811.1| DNA mismatch repair protein mutS [Enterococcus faecalis T2]
gi|256618083|ref|ZP_05474929.1| MutS 1 protein [Enterococcus faecalis ATCC 4200]
gi|256958442|ref|ZP_05562613.1| MutS 1 protein [Enterococcus faecalis DS5]
gi|257078246|ref|ZP_05572607.1| MutS 1 protein [Enterococcus faecalis JH1]
gi|294779165|ref|ZP_06744575.1| DNA mismatch repair protein MutS [Enterococcus faecalis PC1.1]
gi|307270517|ref|ZP_07551815.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX4248]
gi|307284811|ref|ZP_07564967.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0860]
gi|312902026|ref|ZP_07761288.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0470]
gi|397701308|ref|YP_006539096.1| DNA mismatch repair protein MutS [Enterococcus faecalis D32]
gi|422696023|ref|ZP_16754000.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX4244]
gi|422711205|ref|ZP_16768138.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0027]
gi|422720899|ref|ZP_16777506.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0017]
gi|422736093|ref|ZP_16792358.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX1341]
gi|422867026|ref|ZP_16913629.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX1467]
gi|255967097|gb|EET97719.1| DNA mismatch repair protein mutS [Enterococcus faecalis T2]
gi|256597610|gb|EEU16786.1| MutS 1 protein [Enterococcus faecalis ATCC 4200]
gi|256948938|gb|EEU65570.1| MutS 1 protein [Enterococcus faecalis DS5]
gi|256986276|gb|EEU73578.1| MutS 1 protein [Enterococcus faecalis JH1]
gi|294453798|gb|EFG22190.1| DNA mismatch repair protein MutS [Enterococcus faecalis PC1.1]
gi|306503070|gb|EFM72327.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0860]
gi|306513098|gb|EFM81732.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX4248]
gi|311290962|gb|EFQ69518.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0470]
gi|315031848|gb|EFT43780.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0017]
gi|315034870|gb|EFT46802.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0027]
gi|315146537|gb|EFT90553.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX4244]
gi|315167038|gb|EFU11055.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX1341]
gi|329577815|gb|EGG59238.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX1467]
gi|397337947|gb|AFO45619.1| DNA mismatch repair protein MutS [Enterococcus faecalis D32]
Length = 858
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS + N + +LL+TGPNM GKST MRQL L ++AQ+
Sbjct: 587 GHQEYIPNSIRM-------------NPETDILLITGPNMSGKSTYMRQLALTVVMAQI 631
>gi|449896268|ref|ZP_21789561.1| DNA mismatch repair protein MutS [Streptococcus mutans R221]
gi|449989438|ref|ZP_21821053.1| DNA mismatch repair protein MutS [Streptococcus mutans NVAB]
gi|450046201|ref|ZP_21838823.1| DNA mismatch repair protein MutS [Streptococcus mutans N34]
gi|449182552|gb|EMB84572.1| DNA mismatch repair protein MutS [Streptococcus mutans NVAB]
gi|449199233|gb|EMC00311.1| DNA mismatch repair protein MutS [Streptococcus mutans N34]
gi|449262451|gb|EMC59900.1| DNA mismatch repair protein MutS [Streptococcus mutans R221]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|449981704|ref|ZP_21817909.1| DNA mismatch repair protein MutS [Streptococcus mutans 5SM3]
gi|449175600|gb|EMB78006.1| DNA mismatch repair protein MutS [Streptococcus mutans 5SM3]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|449886728|ref|ZP_21786393.1| DNA mismatch repair protein MutS [Streptococcus mutans SA41]
gi|449914234|ref|ZP_21795499.1| DNA mismatch repair protein MutS [Streptococcus mutans 15JP3]
gi|449936544|ref|ZP_21804032.1| DNA mismatch repair protein MutS [Streptococcus mutans 2ST1]
gi|450040377|ref|ZP_21836770.1| DNA mismatch repair protein MutS [Streptococcus mutans T4]
gi|450076207|ref|ZP_21849744.1| DNA mismatch repair protein MutS [Streptococcus mutans N3209]
gi|450153979|ref|ZP_21877477.1| DNA mismatch repair protein MutS [Streptococcus mutans 21]
gi|449158390|gb|EMB61807.1| DNA mismatch repair protein MutS [Streptococcus mutans 15JP3]
gi|449165514|gb|EMB68518.1| DNA mismatch repair protein MutS [Streptococcus mutans 2ST1]
gi|449199018|gb|EMC00103.1| DNA mismatch repair protein MutS [Streptococcus mutans T4]
gi|449212791|gb|EMC13142.1| DNA mismatch repair protein MutS [Streptococcus mutans N3209]
gi|449238250|gb|EMC37024.1| DNA mismatch repair protein MutS [Streptococcus mutans 21]
gi|449253805|gb|EMC51743.1| DNA mismatch repair protein MutS [Streptococcus mutans SA41]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|24380425|ref|NP_722380.1| DNA mismatch repair protein MutS [Streptococcus mutans UA159]
gi|449983731|ref|ZP_21818602.1| DNA mismatch repair protein MutS [Streptococcus mutans NFSM2]
gi|450081136|ref|ZP_21851541.1| DNA mismatch repair protein MutS [Streptococcus mutans N66]
gi|450181402|ref|ZP_21887810.1| DNA mismatch repair protein MutS [Streptococcus mutans 24]
gi|44888210|sp|Q8DRW8.1|MUTS_STRMU RecName: Full=DNA mismatch repair protein MutS
gi|24378451|gb|AAN59686.1|AE015031_2 DNA mismatch repair protein [Streptococcus mutans UA159]
gi|449180987|gb|EMB83119.1| DNA mismatch repair protein MutS [Streptococcus mutans NFSM2]
gi|449215613|gb|EMC15795.1| DNA mismatch repair protein MutS [Streptococcus mutans N66]
gi|449246526|gb|EMC44828.1| DNA mismatch repair protein MutS [Streptococcus mutans 24]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPN+ ++K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GSQEYIPNTINF-------------DQKTSIQLITGPNMSGKSTYMRQLALTVIMAQL 624
>gi|29377617|ref|NP_816771.1| DNA mismatch repair protein MutS [Enterococcus faecalis V583]
gi|227554585|ref|ZP_03984632.1| DNA mismatch repair protein [Enterococcus faecalis HH22]
gi|257418006|ref|ZP_05595000.1| MutS1 protein [Enterococcus faecalis T11]
gi|422713828|ref|ZP_16770576.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0309A]
gi|422718547|ref|ZP_16775200.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0309B]
gi|44888193|sp|Q82ZA2.1|MUTS_ENTFA RecName: Full=DNA mismatch repair protein MutS
gi|29345084|gb|AAO82841.1| DNA mismatch repair protein HexA [Enterococcus faecalis V583]
gi|227176262|gb|EEI57234.1| DNA mismatch repair protein [Enterococcus faecalis HH22]
gi|257159834|gb|EEU89794.1| MutS1 protein [Enterococcus faecalis T11]
gi|315573188|gb|EFU85379.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0309B]
gi|315581310|gb|EFU93501.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0309A]
Length = 858
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCAT---GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
++ +E +P G Q YIPNS + N + +LL+TGPNM GKST
Sbjct: 572 LAIVEGRHPVVEKVLGHQEYIPNSIRM-------------NPETDILLITGPNMSGKSTY 618
Query: 211 MRQLGLITILAQM 223
MRQL L ++AQ+
Sbjct: 619 MRQLALTVVMAQI 631
>gi|392589317|gb|EIW78648.1| DNA mismatch repair protein Msh6 [Coniophora puteana RWD-64-598 SS2]
Length = 1270
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 32/73 (43%), Positives = 39/73 (53%), Gaps = 21/73 (28%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP +S L+ T+IPN DV+ GGE R + LLTGPNMGGKSTV
Sbjct: 992 HPTLSLLKD---------TFIPN---------DVKLGGEVGR---IALLTGPNMGGKSTV 1030
Query: 211 MRQLGLITILAQM 223
MR I+AQ+
Sbjct: 1031 MRMTATGVIMAQL 1043
>gi|384516963|ref|YP_005704268.1| DNA mismatch repair protein MutS [Enterococcus faecalis 62]
gi|323479096|gb|ADX78535.1| DNA mismatch repair protein MutS [Enterococcus faecalis 62]
Length = 858
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCAT---GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
++ +E +P G Q YIPNS + N + +LL+TGPNM GKST
Sbjct: 572 LAIVEGRHPVVEKVLGHQEYIPNSIRM-------------NPETDILLITGPNMSGKSTY 618
Query: 211 MRQLGLITILAQM 223
MRQL L ++AQ+
Sbjct: 619 MRQLALTVVMAQI 631
>gi|336273216|ref|XP_003351363.1| MSH2 protein [Sordaria macrospora k-hell]
gi|380092884|emb|CCC09637.1| putative MSH2 protein [Sordaria macrospora k-hell]
Length = 934
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 14/68 (20%)
Query: 158 ESLYPC--ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLG 215
E+ +PC D T+I N + R ED + L++TGPNMGGKST +RQ+G
Sbjct: 626 EARHPCMEVQDDVTFITNDVTLSR--ED----------SSFLIITGPNMGGKSTYIRQIG 673
Query: 216 LITILAQM 223
+I ++AQ+
Sbjct: 674 VIALMAQI 681
>gi|257080441|ref|ZP_05574802.1| MutS 1 protein [Enterococcus faecalis E1Sol]
gi|256988471|gb|EEU75773.1| MutS 1 protein [Enterococcus faecalis E1Sol]
Length = 858
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 39/73 (53%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCAT---GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
++ +E +P G Q YIPNS + N + +LL+TGPNM GKST
Sbjct: 572 LAIVEGRHPVVEKVLGHQEYIPNSIRM-------------NPETDILLITGPNMSGKSTY 618
Query: 211 MRQLGLITILAQM 223
MRQL L ++AQ+
Sbjct: 619 MRQLALTVVMAQI 631
>gi|257420392|ref|ZP_05597382.1| DNA mismatch repair protein mutS [Enterococcus faecalis X98]
gi|422708064|ref|ZP_16765598.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0043]
gi|257162216|gb|EEU92176.1| DNA mismatch repair protein mutS [Enterococcus faecalis X98]
gi|315154585|gb|EFT98601.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX0043]
Length = 858
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS + N + +LL+TGPNM GKST MRQL L ++AQ+
Sbjct: 587 GHQEYIPNSIRM-------------NPETDILLITGPNMSGKSTYMRQLALTVVMAQI 631
>gi|256854835|ref|ZP_05560199.1| DNA mismatch repair protein mutS [Enterococcus faecalis T8]
gi|422686955|ref|ZP_16745145.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX4000]
gi|256710395|gb|EEU25439.1| DNA mismatch repair protein mutS [Enterococcus faecalis T8]
gi|315028309|gb|EFT40241.1| DNA mismatch repair protein MutS [Enterococcus faecalis TX4000]
Length = 858
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS + N + +LL+TGPNM GKST MRQL L ++AQ+
Sbjct: 587 GHQEYIPNSIRM-------------NPETDILLITGPNMSGKSTYMRQLALTVVMAQI 631
>gi|322419136|ref|YP_004198359.1| DNA mismatch repair protein MutS [Geobacter sp. M18]
gi|320125523|gb|ADW13083.1| DNA mismatch repair protein MutS [Geobacter sp. M18]
Length = 869
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 28/76 (36%), Positives = 41/76 (53%), Gaps = 19/76 (25%)
Query: 148 EEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGK 207
E HP I E +Y + ++PN T + N + ++++TGPNM GK
Sbjct: 587 EGRHPVI---EEMY----SSERFVPNDTFLD------------NGENQLIIITGPNMAGK 627
Query: 208 STVMRQLGLITILAQM 223
ST MRQ+ LIT++AQM
Sbjct: 628 STFMRQVALITLMAQM 643
>gi|229547407|ref|ZP_04436132.1| DNA mismatch repair protein [Enterococcus faecalis TX1322]
gi|229307439|gb|EEN73426.1| DNA mismatch repair protein [Enterococcus faecalis TX1322]
Length = 858
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS + N + +LL+TGPNM GKST MRQL L ++AQ+
Sbjct: 587 GHQEYIPNSIRM-------------NPETDILLITGPNMSGKSTYMRQLALTVVMAQI 631
>gi|418967666|ref|ZP_13519317.1| DNA mismatch repair protein MutS [Streptococcus mitis SK616]
gi|383343081|gb|EID21277.1| DNA mismatch repair protein MutS [Streptococcus mitis SK616]
Length = 844
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPN+ + ED+ ++ L+TGPNM GKST MRQL + ++AQ+
Sbjct: 580 GAQTYIPNTIQMA---EDI----------SIQLITGPNMSGKSTYMRQLAMTAVMAQL 624
>gi|340500328|gb|EGR27216.1| hypothetical protein IMG5_200020 [Ichthyophthirius multifiliis]
Length = 690
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/94 (25%), Positives = 49/94 (52%), Gaps = 5/94 (5%)
Query: 133 DMYQQGVCVPTFLGLEEPHPYISALESLYPCA---TGDQTYIPNSTVIGRCKEDVESGGE 189
+++ Q P + + ++ ++ YP ++ Y+PN+ + K+++ +
Sbjct: 425 NIFSQKKTKPIIIQEQNTQNFVQIIKGKYPLIQQNNKNKEYVPNNIFLSFQKQNINCSNQ 484
Query: 190 GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ + ++ TGPNMGGKST +R + L ILAQ+
Sbjct: 485 LSYQAYII--TGPNMGGKSTTLRMVALNVILAQI 516
>gi|157692388|ref|YP_001486850.1| DNA mismatch repair protein MutS [Bacillus pumilus SAFR-032]
gi|167012381|sp|A8FDH3.1|MUTS_BACP2 RecName: Full=DNA mismatch repair protein MutS
gi|157681146|gb|ABV62290.1| DNA mismatch repair protein MutS1 [Bacillus pumilus SAFR-032]
Length = 858
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/56 (44%), Positives = 33/56 (58%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q Y+PN +G ++ LL+TGPNM GKST MRQ+ LI+ILAQ+
Sbjct: 580 QEYVPNDCHMGNGRQ-------------TLLITGPNMSGKSTYMRQMALISILAQI 622
>gi|409351336|ref|ZP_11234098.1| DNA mismatch repair protein mutS [Lactobacillus equicursoris CIP
110162]
gi|407876814|emb|CCK86156.1| DNA mismatch repair protein mutS [Lactobacillus equicursoris CIP
110162]
Length = 857
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 48/98 (48%), Gaps = 26/98 (26%)
Query: 132 KDMYQQGVCVPTFLGLEE------PHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVE 185
+D ++ C PTF +E HP + A+ G +YIPN + ED
Sbjct: 552 EDAEEKNYCRPTFAKKQEIDIKNGRHPVVEAV-----LEAG--SYIPNDLTM---DEDT- 600
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++ L+TGPNM GKST MRQ+ LI I+AQ+
Sbjct: 601 ---------SIYLITGPNMSGKSTYMRQMALIAIMAQV 629
>gi|376295257|ref|YP_005166487.1| DNA mismatch repair protein MutS [Desulfovibrio desulfuricans
ND132]
gi|323457818|gb|EGB13683.1| DNA mismatch repair protein MutS [Desulfovibrio desulfuricans
ND132]
Length = 868
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 41/73 (56%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + A A G YIP G + D +G R +LL+TGPNM GKSTV
Sbjct: 584 HPVVEA-------AMGAANYIP-----GDLRMD-----QGRR---ILLITGPNMAGKSTV 623
Query: 211 MRQLGLITILAQM 223
+RQ+ ++TI+AQ+
Sbjct: 624 LRQVAIMTIMAQI 636
>gi|109077790|ref|XP_001110439.1| PREDICTED: DNA mismatch repair protein Msh3 [Macaca mulatta]
Length = 1124
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I L G+Q Y+PNST + ED E V+++TGPNMGGKS+
Sbjct: 852 HPVIDVL-------LGEQDQYVPNSTDLS---EDSER---------VMIITGPNMGGKSS 892
Query: 210 VMRQLGLITILAQM 223
++Q+ LITI+AQ+
Sbjct: 893 YIKQVALITIMAQI 906
>gi|443476208|ref|ZP_21066125.1| DNA mismatch repair protein MutS [Pseudanabaena biceps PCC 7429]
gi|443018833|gb|ELS33019.1| DNA mismatch repair protein MutS [Pseudanabaena biceps PCC 7429]
Length = 893
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 36/54 (66%), Gaps = 8/54 (14%)
Query: 170 YIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+IPNST +G ++ V P +++LTGPNM GKS +RQ+GLI ++AQ+
Sbjct: 638 FIPNSTYLGNDRQSV--------CPDLIVLTGPNMSGKSIYLRQVGLIQLMAQV 683
>gi|391232013|ref|ZP_10268219.1| DNA mismatch repair protein MutS [Opitutaceae bacterium TAV1]
gi|391221674|gb|EIQ00095.1| DNA mismatch repair protein MutS [Opitutaceae bacterium TAV1]
Length = 859
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 27/78 (34%), Positives = 41/78 (52%), Gaps = 14/78 (17%)
Query: 148 EEPHPYISAL--ESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMG 205
E HP + + A G Q+++PN T++ + + L+TGPNM
Sbjct: 594 EGRHPVVEQMLKNPAASAARGAQSFVPNDTLLS------------SSDAQLALITGPNMA 641
Query: 206 GKSTVMRQLGLITILAQM 223
GKST +RQ+ LIT+LAQ+
Sbjct: 642 GKSTYIRQVALITLLAQI 659
>gi|347727166|gb|AEP19941.1| DNA mismatch repair protein MutS [Bacillus aquimaris]
Length = 797
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN C D E +LL+TGPNM GKST MRQ+ L +ILAQ+
Sbjct: 585 GAQEYVPNE-----CYMDAER--------EILLVTGPNMSGKSTYMRQVALTSILAQI 629
>gi|403256359|ref|XP_003920848.1| PREDICTED: DNA mismatch repair protein Msh3 [Saimiri boliviensis
boliviensis]
Length = 1123
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I L G+Q Y+PNST + ED E V+++TGPNMGGKS+
Sbjct: 851 HPVIDVL-------LGEQDQYVPNSTDLS---EDSER---------VMIITGPNMGGKSS 891
Query: 210 VMRQLGLITILAQM 223
++Q+ LITI+AQ+
Sbjct: 892 YIKQVALITIMAQI 905
>gi|399545598|ref|YP_006558906.1| DNA mismatch repair protein mutS [Marinobacter sp. BSs20148]
gi|399160930|gb|AFP31493.1| DNA mismatch repair protein mutS [Marinobacter sp. BSs20148]
Length = 875
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 31/115 (26%)
Query: 117 PQQSNNTIFSQRNILKDMYQQG----VCVPTF-----LGLEE-PHPYISALESLYPCATG 166
P Q ++ ++L + ++ +C P F L +EE HP + L
Sbjct: 544 PLQDAAQALAELDVLSNFAERASSLRLCAPQFSDEPGLQIEEGRHPVVEQLL-------- 595
Query: 167 DQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILA 221
D ++PN+ +I + K +L++TGPNMGGKST MRQ+ LI +LA
Sbjct: 596 DDPFVPNNLLI-------------DAKRRMLVITGPNMGGKSTYMRQVALIALLA 637
>gi|417794024|ref|ZP_12441287.1| DNA mismatch repair protein MutS [Streptococcus oralis SK255]
gi|334271134|gb|EGL89528.1| DNA mismatch repair protein MutS [Streptococcus oralis SK255]
Length = 844
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + ED ++ L+TGPNM GKST MRQL + ++AQ+
Sbjct: 580 GAQTYIPNSI---QMSEDT----------SIQLITGPNMSGKSTYMRQLAMTAVMAQL 624
>gi|328851311|gb|EGG00467.1| hypothetical protein MELLADRAFT_118031 [Melampsora larici-populina
98AG31]
Length = 963
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/72 (34%), Positives = 41/72 (56%), Gaps = 14/72 (19%)
Query: 154 ISALESLYPC--ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVM 211
+S E +PC D +IPN T++ R + + ++TGPNMGGKST +
Sbjct: 652 VSLKECRHPCLEVQEDINFIPNDTIMER------------NQSSFHIITGPNMGGKSTYI 699
Query: 212 RQLGLITILAQM 223
RQ+G++ ++AQ+
Sbjct: 700 RQIGVVALMAQL 711
>gi|325185282|emb|CCA19770.1| DNA mismatch repair protein mutS putative [Albugo laibachii Nc14]
Length = 890
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ ++PNS + C E +GN + LTGPNMGGKST +RQ I ILAQM
Sbjct: 616 RAFVPNSLHLQSCTEP-----QGNAIGSCCFLTGPNMGGKSTFLRQNAQIVILAQM 666
>gi|306828748|ref|ZP_07461940.1| DNA mismatch repair protein MutS [Streptococcus mitis ATCC 6249]
gi|304428926|gb|EFM32014.1| DNA mismatch repair protein MutS [Streptococcus mitis ATCC 6249]
Length = 844
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + ED ++ L+TGPNM GKST MRQL + ++AQ+
Sbjct: 580 GAQTYIPNSIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAVMAQL 624
>gi|171687199|ref|XP_001908540.1| hypothetical protein [Podospora anserina S mat+]
gi|170943561|emb|CAP69213.1| unnamed protein product [Podospora anserina S mat+]
Length = 1118
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 36/116 (31%), Positives = 56/116 (48%), Gaps = 19/116 (16%)
Query: 114 DYKPQQSNNTIFSQRNILKDMYQ----QGVCVPTFLGLEEPHPYISALESLYPCA--TGD 167
+Y+P + + + + L + Q G P FL + P P IS +E +P A T
Sbjct: 807 EYQPLRDAVSSLATLDCLLSLSQVASLPGYSKPNFLPITAP-PSISIVEGRHPIAEHTLS 865
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
YIP +T + + P L+TGPNMGGKS+ +R + L+ +LAQ+
Sbjct: 866 TPYIPFTTSLS------------SPAPLAQLITGPNMGGKSSYVRSVALLVLLAQV 909
>gi|449705043|gb|EMD45176.1| mutS family protein [Entamoeba histolytica KU27]
Length = 934
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 23/103 (22%)
Query: 121 NNTIFSQRNILKDMYQQGVCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRC 180
N I+S R KD + P F + HPY++ + + IP++ ++G
Sbjct: 667 NGMIYSYR---KDPEPTSITTPYFNAKQLKHPYLTV--------STKTSAIPSNIILG-- 713
Query: 181 KEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
P ++LTGPNMGGKST++R + L I+AQM
Sbjct: 714 ----------GTDPQTIILTGPNMGGKSTLLRTVCLAVIMAQM 746
>gi|417923013|ref|ZP_12566488.1| DNA mismatch repair protein MutS [Streptococcus mitis SK569]
gi|342837366|gb|EGU71559.1| DNA mismatch repair protein MutS [Streptococcus mitis SK569]
Length = 844
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPN+ + ED+ ++ L+TGPNM GKST MRQL + ++AQ+
Sbjct: 580 GAQTYIPNTIQMA---EDI----------SIQLITGPNMSGKSTYMRQLAMTAVMAQL 624
>gi|355750038|gb|EHH54376.1| hypothetical protein EGM_15199, partial [Macaca fascicularis]
Length = 1121
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I L G+Q Y+PNST + ED E V+++TGPNMGGKS+
Sbjct: 849 HPVIDVL-------LGEQDQYVPNSTDLS---EDSER---------VMIITGPNMGGKSS 889
Query: 210 VMRQLGLITILAQM 223
++Q+ LITI+AQ+
Sbjct: 890 YIKQVALITIMAQI 903
>gi|67472182|ref|XP_651951.1| mutS family protein [Entamoeba histolytica HM-1:IMSS]
gi|56468745|gb|EAL46564.1| mutS family protein [Entamoeba histolytica HM-1:IMSS]
Length = 934
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 32/103 (31%), Positives = 49/103 (47%), Gaps = 23/103 (22%)
Query: 121 NNTIFSQRNILKDMYQQGVCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRC 180
N I+S R KD + P F + HPY++ + + IP++ ++G
Sbjct: 667 NGMIYSYR---KDPEPTSITTPYFNAKQLKHPYLTV--------STKTSAIPSNIILG-- 713
Query: 181 KEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
P ++LTGPNMGGKST++R + L I+AQM
Sbjct: 714 ----------GTDPQTIILTGPNMGGKSTLLRTVCLAVIMAQM 746
>gi|295696238|ref|YP_003589476.1| DNA mismatch repair protein MutS [Kyrpidia tusciae DSM 2912]
gi|295411840|gb|ADG06332.1| DNA mismatch repair protein MutS [Kyrpidia tusciae DSM 2912]
Length = 879
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 19/73 (26%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + E++ P D T++PN T + +G+ + V L+TGPNM GKST
Sbjct: 576 HPVV---EAVLP----DGTFVPNDTFL-----------DGDHR-RVALITGPNMAGKSTY 616
Query: 211 MRQLGLITILAQM 223
MRQ+ LI +LAQ+
Sbjct: 617 MRQVALIVLLAQV 629
>gi|227524330|ref|ZP_03954379.1| DNA mismatch repair protein MutS [Lactobacillus hilgardii ATCC
8290]
gi|227088561|gb|EEI23873.1| DNA mismatch repair protein MutS [Lactobacillus hilgardii ATCC
8290]
Length = 863
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN+ +G ED +VLL+TGPNM GKST MRQ+ L I+ QM
Sbjct: 578 GHQQYVPNNVDMG---EDT----------SVLLITGPNMSGKSTYMRQMALCVIMNQM 622
>gi|218678736|ref|ZP_03526633.1| DNA mismatch repair protein [Rhizobium etli CIAT 894]
Length = 228
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 190 GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G++ + LLTGPNMGGKST +RQ LI ILAQM
Sbjct: 120 GDKDGAIWLLTGPNMGGKSTFLRQNALIAILAQM 153
>gi|390459821|ref|XP_002744847.2| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh3
[Callithrix jacchus]
Length = 1126
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I L G+Q Y+PNST + ED E V+++TGPNMGGKS+
Sbjct: 854 HPVIDVL-------LGEQDQYVPNSTDLS---EDSER---------VMIITGPNMGGKSS 894
Query: 210 VMRQLGLITILAQM 223
++Q+ LITI+AQ+
Sbjct: 895 YIKQVALITIMAQI 908
>gi|358465299|ref|ZP_09175249.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 058
str. F0407]
gi|357065794|gb|EHI75969.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 058
str. F0407]
Length = 844
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + ED ++ L+TGPNM GKST MRQL + ++AQ+
Sbjct: 580 GAQTYIPNSIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAVMAQL 624
>gi|315612291|ref|ZP_07887205.1| DNA mismatch repair protein MutS [Streptococcus sanguinis ATCC
49296]
gi|315315684|gb|EFU63722.1| DNA mismatch repair protein MutS [Streptococcus sanguinis ATCC
49296]
Length = 844
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + ED ++ L+TGPNM GKST MRQL + ++AQ+
Sbjct: 580 GAQTYIPNSIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAVMAQL 624
>gi|308447781|ref|XP_003087520.1| hypothetical protein CRE_30343 [Caenorhabditis remanei]
gi|308255009|gb|EFO98961.1| hypothetical protein CRE_30343 [Caenorhabditis remanei]
Length = 261
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/104 (26%), Positives = 51/104 (49%), Gaps = 4/104 (3%)
Query: 19 IAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFL-RKTRYLCVSKTESLFQIDY--- 74
+ ++ D K P G+ I K D +AD+WR+ F + R+ RY+C S I
Sbjct: 1 MCIVADKSKAPRGFVPIVKCQDDQAEADLWRDGFFTINRQVRYICTSTEIPDSNIKTPVQ 60
Query: 75 IVENICIINEKETPPDGFCLIARTLDSDQGQICERGGVVDYKPQ 118
++ N+ I+ E + P G+ I T DS + + ++ + +P+
Sbjct: 61 VITNLIIVRESDPIPHGYVAIDYTADSREKSLRKKYVCIRTEPR 104
>gi|126667870|ref|ZP_01738836.1| DNA mismatch repair protein [Marinobacter sp. ELB17]
gi|126627686|gb|EAZ98317.1| DNA mismatch repair protein [Marinobacter sp. ELB17]
Length = 862
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 35/115 (30%), Positives = 55/115 (47%), Gaps = 31/115 (26%)
Query: 117 PQQSNNTIFSQRNILKDMYQQG----VCVPTF-----LGLEE-PHPYISALESLYPCATG 166
P Q ++ ++L + ++ +C P F L +EE HP + L
Sbjct: 531 PLQDAAQALAELDVLSNFAERASSLRLCAPQFSDEPGLQIEEGRHPVVEQLL-------- 582
Query: 167 DQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILA 221
D ++PN+ +I + K +L++TGPNMGGKST MRQ+ LI +LA
Sbjct: 583 DDPFVPNNLLI-------------DAKRRMLVITGPNMGGKSTYMRQVALIALLA 624
>gi|407972978|ref|ZP_11153891.1| DNA mismatch repair protein MutS [Nitratireductor indicus C115]
gi|407431749|gb|EKF44420.1| DNA mismatch repair protein MutS [Nitratireductor indicus C115]
Length = 883
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 21/35 (60%), Positives = 26/35 (74%)
Query: 189 EGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
EG + + LLTGPNMGGKST +RQ LI ++AQM
Sbjct: 622 EGEKHGAIWLLTGPNMGGKSTFLRQNALIAVMAQM 656
>gi|377831895|ref|ZP_09814860.1| DNA mismatch repair protein MutS [Lactobacillus mucosae LM1]
gi|377554273|gb|EHT15987.1| DNA mismatch repair protein MutS [Lactobacillus mucosae LM1]
Length = 882
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN ++ + + ++LL+TGPNM GKST MRQL L ++AQM
Sbjct: 583 GYQKYVPNDVLM-------------DPQTSILLITGPNMSGKSTYMRQLALTAVMAQM 627
>gi|46404943|gb|AAS93342.1| DNA mismatch repair protein [Streptococcus pyogenes]
Length = 135
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 57 GAQEYIPNSISF-------------DQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 101
>gi|71904476|ref|YP_281279.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS6180]
gi|90109860|sp|Q48QT6.1|MUTS_STRPM RecName: Full=DNA mismatch repair protein MutS
gi|71803571|gb|AAX72924.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS6180]
Length = 851
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GVQEYIPNSISF-------------DQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|406586640|ref|ZP_11061567.1| DNA mismatch repair protein MutS [Streptococcus sp. GMD1S]
gi|419813732|ref|ZP_14338544.1| DNA mismatch repair protein MutS [Streptococcus sp. GMD2S]
gi|419817182|ref|ZP_14341350.1| DNA mismatch repair protein MutS [Streptococcus sp. GMD4S]
gi|404466312|gb|EKA11656.1| DNA mismatch repair protein MutS [Streptococcus sp. GMD4S]
gi|404472665|gb|EKA17082.1| DNA mismatch repair protein MutS [Streptococcus sp. GMD2S]
gi|404473892|gb|EKA18216.1| DNA mismatch repair protein MutS [Streptococcus sp. GMD1S]
Length = 844
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + ED ++ L+TGPNM GKST MRQL + ++AQ+
Sbjct: 580 GAQTYIPNSIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAVMAQL 624
>gi|331267175|ref|YP_004326805.1| DNA mismatch repair protein MutS [Streptococcus oralis Uo5]
gi|326683847|emb|CBZ01465.1| DNA mismatch repair protein MutS [Streptococcus oralis Uo5]
Length = 844
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + ED ++ L+TGPNM GKST MRQL + ++AQ+
Sbjct: 580 GAQTYIPNSIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAVMAQL 624
>gi|306826023|ref|ZP_07459359.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 071
str. 73H25AP]
gi|304431739|gb|EFM34719.1| DNA mismatch repair protein MutS [Streptococcus sp. oral taxon 071
str. 73H25AP]
Length = 844
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + ED ++ L+TGPNM GKST MRQL + ++AQ+
Sbjct: 580 GAQTYIPNSIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAVMAQL 624
>gi|385840668|ref|YP_005863992.1| DNA mismatch repair protein mutS [Lactobacillus salivarius CECT
5713]
gi|300214789|gb|ADJ79205.1| DNA mismatch repair protein mutS [Lactobacillus salivarius CECT
5713]
Length = 876
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPN + +D++ VLL+TGPNM GKST MRQL L ++AQ+
Sbjct: 587 GKQSYIPNDI---KMDDDLD----------VLLITGPNMSGKSTYMRQLALTVVIAQI 631
>gi|427710607|ref|YP_007052984.1| DNA mismatch repair protein MutS [Nostoc sp. PCC 7107]
gi|427363112|gb|AFY45834.1| DNA mismatch repair protein MutS [Nostoc sp. PCC 7107]
Length = 855
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 8/54 (14%)
Query: 170 YIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++PNST +G GE P +++LTGPN GKS +RQ+GLI ++AQ+
Sbjct: 636 FVPNSTNLG--------SGEATAFPDLIILTGPNASGKSCYLRQVGLIQLMAQI 681
>gi|421237166|ref|ZP_15693758.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2071004]
gi|395600104|gb|EJG60262.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2071004]
Length = 844
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 13/60 (21%)
Query: 164 ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
A G QTYIPN+ + ED ++ L+TGPNM GKST MRQL + ++AQ+
Sbjct: 578 AMGAQTYIPNTIQMA---EDT----------SIQLVTGPNMSGKSTYMRQLAMTAVMAQL 624
>gi|386363596|ref|YP_006072927.1| DNA mismatch repair protein MutS [Streptococcus pyogenes Alab49]
gi|350278005|gb|AEQ25373.1| DNA mismatch repair protein MutS [Streptococcus pyogenes Alab49]
Length = 851
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GVQEYIPNSISF-------------DQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|301761694|ref|XP_002916275.1| PREDICTED: DNA mismatch repair protein Msh3-like, partial
[Ailuropoda melanoleuca]
Length = 1123
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I L G+Q Y+PNST + G+ R V+++TGPNMGGKS+
Sbjct: 852 HPVIDVL-------LGEQDQYVPNSTNLS---------GDSER---VMIITGPNMGGKSS 892
Query: 210 VMRQLGLITILAQM 223
++Q+ LIT++AQ+
Sbjct: 893 YIKQVALITVMAQI 906
>gi|94995318|ref|YP_603416.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS10750]
gi|166232145|sp|Q1J489.1|MUTS_STRPF RecName: Full=DNA mismatch repair protein MutS
gi|94548826|gb|ABF38872.1| DNA mismatch repair protein mutS [Streptococcus pyogenes MGAS10750]
Length = 851
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GVQEYIPNSISF-------------DQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|90962103|ref|YP_536019.1| DNA mismatch repair protein MutS [Lactobacillus salivarius UCC118]
gi|122448803|sp|Q1WT15.1|MUTS_LACS1 RecName: Full=DNA mismatch repair protein MutS
gi|90821297|gb|ABD99936.1| DNA mismatch repair protein [Lactobacillus salivarius UCC118]
Length = 876
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPN + +D++ VLL+TGPNM GKST MRQL L ++AQ+
Sbjct: 587 GKQSYIPNDI---KMDDDLD----------VLLITGPNMSGKSTYMRQLALTVVIAQI 631
>gi|424888940|ref|ZP_18312543.1| DNA mismatch repair protein MutS [Rhizobium leguminosarum bv.
trifolii WSM2012]
gi|393174489|gb|EJC74533.1| DNA mismatch repair protein MutS [Rhizobium leguminosarum bv.
trifolii WSM2012]
Length = 908
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 28/38 (73%)
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
S G++ + LLTGPNMGGKST +RQ LI+ILAQM
Sbjct: 647 SPKSGDKDGGIWLLTGPNMGGKSTFLRQNALISILAQM 684
>gi|424915800|ref|ZP_18339164.1| DNA mismatch repair protein MutS [Rhizobium leguminosarum bv.
trifolii WSM597]
gi|392851976|gb|EJB04497.1| DNA mismatch repair protein MutS [Rhizobium leguminosarum bv.
trifolii WSM597]
Length = 908
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 190 GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G++ + LLTGPNMGGKST +RQ LI ILAQM
Sbjct: 651 GDKDGAIWLLTGPNMGGKSTFLRQNALIAILAQM 684
>gi|417916532|ref|ZP_12560109.1| DNA mismatch repair protein MutS [Streptococcus mitis bv. 2 str.
SK95]
gi|342829423|gb|EGU63777.1| DNA mismatch repair protein MutS [Streptococcus mitis bv. 2 str.
SK95]
Length = 844
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPNS + ED ++ L+TGPNM GKST MRQL + ++AQ+
Sbjct: 580 GAQTYIPNSIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAVMAQL 624
>gi|253577127|ref|ZP_04854448.1| DNA mismatch repair protein MutS [Paenibacillus sp. oral taxon 786
str. D14]
gi|251843509|gb|EES71536.1| DNA mismatch repair protein MutS [Paenibacillus sp. oral taxon 786
str. D14]
Length = 951
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 42/73 (57%), Gaps = 19/73 (26%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + A+ D +I NST + ++D + ++LL+TGPNM GKST
Sbjct: 580 HPVVEAVMK-------DTAFIANSTEL---RKD---------EASILLITGPNMAGKSTY 620
Query: 211 MRQLGLITILAQM 223
MRQ+ LI+ILAQ+
Sbjct: 621 MRQVALISILAQI 633
>gi|209547644|ref|YP_002279561.1| DNA mismatch repair protein MutS [Rhizobium leguminosarum bv.
trifolii WSM2304]
gi|209533400|gb|ACI53335.1| DNA mismatch repair protein MutS [Rhizobium leguminosarum bv.
trifolii WSM2304]
Length = 880
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 190 GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G++ + LLTGPNMGGKST +RQ LI ILAQM
Sbjct: 623 GDKDGAIWLLTGPNMGGKSTFLRQNALIAILAQM 656
>gi|56808552|ref|ZP_00366286.1| COG0249: Mismatch repair ATPase (MutS family) [Streptococcus
pyogenes M49 591]
Length = 794
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 523 GVQEYIPNSISF-------------DQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 567
>gi|417933705|ref|ZP_12577025.1| DNA mismatch repair protein MutS [Streptococcus mitis bv. 2 str.
F0392]
gi|340770275|gb|EGR92790.1| DNA mismatch repair protein MutS [Streptococcus mitis bv. 2 str.
F0392]
Length = 844
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPN+ + ED+ ++ L+TGPNM GKST MRQL + ++AQ+
Sbjct: 580 GAQTYIPNTI---QMTEDI----------SIQLITGPNMSGKSTYMRQLAMTAVMAQL 624
>gi|334119831|ref|ZP_08493915.1| DNA mismatch repair protein mutS [Microcoleus vaginatus FGP-2]
gi|333457472|gb|EGK86095.1| DNA mismatch repair protein mutS [Microcoleus vaginatus FGP-2]
Length = 875
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 137 QGVCVPTFLGLEEPHPYISALESLYPCATGD---QTYIPNSTVIGRCKEDVESGGEGNRK 193
Q C PT E I +E +P ++PNS +GR E +
Sbjct: 606 QNYCRPTMTESRE----IKIIEGCHPVVEKSLPPGFFVPNSAFLGR--------EESLNR 653
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
P +++LTGPN GKS +RQ+GLI ++AQM
Sbjct: 654 PDLIILTGPNASGKSCYLRQVGLIQLMAQM 683
>gi|301301372|ref|ZP_07207514.1| DNA mismatch repair protein MutS [Lactobacillus salivarius
ACS-116-V-Col5a]
gi|300851032|gb|EFK78774.1| DNA mismatch repair protein MutS [Lactobacillus salivarius
ACS-116-V-Col5a]
Length = 876
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPN + +D++ VLL+TGPNM GKST MRQL L ++AQ+
Sbjct: 587 GKQSYIPNDI---KMDDDLD----------VLLITGPNMSGKSTYMRQLALTVVIAQI 631
>gi|290999909|ref|XP_002682522.1| DNA mismatch repair protein msh6 [Naegleria gruberi]
gi|284096149|gb|EFC49778.1| DNA mismatch repair protein msh6 [Naegleria gruberi]
Length = 1998
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/88 (32%), Positives = 43/88 (48%), Gaps = 13/88 (14%)
Query: 136 QQGVCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPT 195
Q+G C P L + P + + +P +IPN +G +D T
Sbjct: 1686 QEGYCRPVILPFKNK-PVLKVTKMRHPTVRTTSGFIPNDIFMG--ADDA----------T 1732
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
LL+TGPNMGGKST++R + I+AQ+
Sbjct: 1733 TLLVTGPNMGGKSTILRSSCIAVIMAQI 1760
>gi|209560232|ref|YP_002286704.1| DNA mismatch repair protein MutS [Streptococcus pyogenes NZ131]
gi|238058945|sp|B5XJ75.1|MUTS_STRPZ RecName: Full=DNA mismatch repair protein MutS
gi|209541433|gb|ACI62009.1| DNA mismatch repair protein MutS [Streptococcus pyogenes NZ131]
Length = 851
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GVQEYIPNSISF-------------DQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|21911342|ref|NP_665610.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS315]
gi|28896716|ref|NP_803066.1| DNA mismatch repair protein MutS [Streptococcus pyogenes SSI-1]
gi|342165160|sp|P0DC60.1|MUTS_STRP3 RecName: Full=DNA mismatch repair protein MutS
gi|342165161|sp|P0DC61.1|MUTS_STRPQ RecName: Full=DNA mismatch repair protein MutS
gi|21905557|gb|AAM80413.1| putative DNA mismatch repair protein [Streptococcus pyogenes
MGAS315]
gi|28811970|dbj|BAC64899.1| putative DNA mismatch repair protein [Streptococcus pyogenes SSI-1]
Length = 851
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GVQEYIPNSISF-------------DQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|417810019|ref|ZP_12456700.1| DNA mismatch repair protein MutS [Lactobacillus salivarius GJ-24]
gi|335350943|gb|EGM52439.1| DNA mismatch repair protein MutS [Lactobacillus salivarius GJ-24]
Length = 876
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPN + +D++ VLL+TGPNM GKST MRQL L ++AQ+
Sbjct: 587 GKQSYIPNDI---KMDDDLD----------VLLITGPNMSGKSTYMRQLALTVVIAQI 631
>gi|417788661|ref|ZP_12436344.1| DNA mismatch repair protein MutS [Lactobacillus salivarius NIAS840]
gi|418961625|ref|ZP_13513510.1| DNA mismatch repair protein MutS [Lactobacillus salivarius SMXD51]
gi|334308838|gb|EGL99824.1| DNA mismatch repair protein MutS [Lactobacillus salivarius NIAS840]
gi|380343720|gb|EIA32068.1| DNA mismatch repair protein MutS [Lactobacillus salivarius SMXD51]
Length = 876
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPN + +D++ VLL+TGPNM GKST MRQL L ++AQ+
Sbjct: 587 GKQSYIPNDI---KMDDDLD----------VLLITGPNMSGKSTYMRQLALTVVIAQI 631
>gi|329770226|ref|ZP_08261616.1| DNA mismatch repair protein MutS [Gemella sanguinis M325]
gi|328837032|gb|EGF86676.1| DNA mismatch repair protein MutS [Gemella sanguinis M325]
Length = 882
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 21/32 (65%), Positives = 25/32 (78%)
Query: 192 RKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ +LL+TGPNM GKST MRQL LI ILAQ+
Sbjct: 583 KDENILLITGPNMSGKSTYMRQLALIVILAQI 614
>gi|281350300|gb|EFB25884.1| hypothetical protein PANDA_004330 [Ailuropoda melanoleuca]
Length = 1074
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I L G+Q Y+PNST + G+ R V+++TGPNMGGKS+
Sbjct: 838 HPVIDVL-------LGEQDQYVPNSTNLS---------GDSER---VMIITGPNMGGKSS 878
Query: 210 VMRQLGLITILAQM 223
++Q+ LIT++AQ+
Sbjct: 879 YIKQVALITVMAQI 892
>gi|227891125|ref|ZP_04008930.1| DNA mismatch repair protein [Lactobacillus salivarius ATCC 11741]
gi|227866999|gb|EEJ74420.1| DNA mismatch repair protein [Lactobacillus salivarius ATCC 11741]
Length = 876
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPN + +D++ VLL+TGPNM GKST MRQL L ++AQ+
Sbjct: 587 GKQSYIPNDI---KMDDDLD----------VLLITGPNMSGKSTYMRQLALTVVIAQI 631
>gi|227513115|ref|ZP_03943164.1| DNA mismatch repair protein [Lactobacillus buchneri ATCC 11577]
gi|227083690|gb|EEI19002.1| DNA mismatch repair protein [Lactobacillus buchneri ATCC 11577]
Length = 862
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN+ +G ED +VLL+TGPNM GKST MRQ+ L I+ QM
Sbjct: 578 GHQQYVPNNVDMG---EDT----------SVLLITGPNMSGKSTYMRQMALCVIMNQM 622
>gi|71032141|ref|XP_765712.1| DNA repair protein [Theileria parva strain Muguga]
gi|68352669|gb|EAN33429.1| DNA repair protein, putative [Theileria parva]
Length = 1160
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/67 (40%), Positives = 40/67 (59%), Gaps = 12/67 (17%)
Query: 158 ESLYPC-ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGL 216
+S+YP + ++PNS IG EG P +L++TGPNMGGKST++RQ+ L
Sbjct: 895 DSVYPIFSISGNKFVPNSVNIG----------EGFDGP-ILIITGPNMGGKSTLLRQIAL 943
Query: 217 ITILAQM 223
I+ Q+
Sbjct: 944 TVIMGQI 950
>gi|50915171|ref|YP_061143.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS10394]
gi|139474579|ref|YP_001129295.1| DNA mismatch repair protein MutS [Streptococcus pyogenes str.
Manfredo]
gi|68052493|sp|Q5X9F3.1|MUTS_STRP6 RecName: Full=DNA mismatch repair protein MutS
gi|166232146|sp|A2RGX2.1|MUTS_STRPG RecName: Full=DNA mismatch repair protein MutS
gi|50904245|gb|AAT87960.1| MutS [Streptococcus pyogenes MGAS10394]
gi|134272826|emb|CAM31104.1| DNA mismatch repair protein MutS [Streptococcus pyogenes str.
Manfredo]
Length = 851
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GVQEYIPNSISF-------------DQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|15675890|ref|NP_270064.1| DNA mismatch repair protein MutS [Streptococcus pyogenes SF370]
gi|71911618|ref|YP_283168.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS5005]
gi|410681461|ref|YP_006933863.1| DNA mismatch repair protein MutS [Streptococcus pyogenes A20]
gi|18202683|sp|Q99XL8.1|MUTS_STRP1 RecName: Full=DNA mismatch repair protein MutS
gi|13623126|gb|AAK34785.1| putative DNA mismatch repair protein [Streptococcus pyogenes M1
GAS]
gi|71854400|gb|AAZ52423.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS5005]
gi|395454824|dbj|BAM31163.1| DNA mismatch repair protein [Streptococcus pyogenes M1 476]
gi|409694050|gb|AFV38910.1| DNA mismatch repair protein MutS [Streptococcus pyogenes A20]
Length = 851
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GVQEYIPNSISF-------------DQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|386001033|ref|YP_005919332.1| DNA mismatch repair protein MutS [Methanosaeta harundinacea 6Ac]
gi|357209089|gb|AET63709.1| DNA mismatch repair protein MutS [Methanosaeta harundinacea 6Ac]
Length = 893
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/46 (54%), Positives = 30/46 (65%), Gaps = 3/46 (6%)
Query: 178 GRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G DV+ G NR V++LTGPNM GKST MRQ+ L ILAQ+
Sbjct: 597 GFVANDVDLDGRSNR---VIILTGPNMAGKSTYMRQIALAIILAQI 639
>gi|422883110|ref|ZP_16929559.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK49]
gi|332363702|gb|EGJ41482.1| DNA mismatch repair protein HexA [Streptococcus sanguinis SK49]
Length = 849
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 35/58 (60%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+YIPNS ++ +++ + L+TG NM GKST MRQL +I I+AQM
Sbjct: 580 GAQSYIPNSILL-------------DQETDIQLITGHNMSGKSTYMRQLAIIVIMAQM 624
>gi|357632984|ref|ZP_09130862.1| DNA mismatch repair protein MutS [Desulfovibrio sp. FW1012B]
gi|357581538|gb|EHJ46871.1| DNA mismatch repair protein MutS [Desulfovibrio sp. FW1012B]
Length = 880
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 36/73 (49%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP I A A G YIPN + + +LL+TGPNM GKSTV
Sbjct: 585 HPVIEA-------AQGIGNYIPNDISV-------------DDAARLLLITGPNMAGKSTV 624
Query: 211 MRQLGLITILAQM 223
+RQ LI ILAQ+
Sbjct: 625 LRQTALIAILAQI 637
>gi|227510187|ref|ZP_03940236.1| DNA mismatch repair protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
gi|227190392|gb|EEI70459.1| DNA mismatch repair protein [Lactobacillus brevis subsp.
gravesensis ATCC 27305]
Length = 862
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN+ +G ED +VLL+TGPNM GKST MRQ+ L I+ QM
Sbjct: 578 GHQQYVPNNVDMG---EDT----------SVLLITGPNMSGKSTYMRQMALCVIMNQM 622
>gi|421892385|ref|ZP_16323055.1| DNA mismatch repair protein MutS [Streptococcus pyogenes NS88.2]
gi|379981856|emb|CCG26777.1| DNA mismatch repair protein MutS [Streptococcus pyogenes NS88.2]
Length = 851
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GVQEYIPNSISF-------------DQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|383480785|ref|YP_005389679.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS15252]
gi|383494765|ref|YP_005412441.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS1882]
gi|378928775|gb|AFC66981.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS15252]
gi|378930492|gb|AFC68909.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS1882]
Length = 851
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GVQEYIPNSISF-------------DQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|418296833|ref|ZP_12908676.1| DNA mismatch repair protein MutS [Agrobacterium tumefaciens
CCNWGS0286]
gi|355539008|gb|EHH08250.1| DNA mismatch repair protein MutS [Agrobacterium tumefaciens
CCNWGS0286]
Length = 904
Score = 49.3 bits (116), Expect = 0.001, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
S G + + LLTGPNMGGKST +RQ LITILAQ+
Sbjct: 640 SAVNGGKNGAIWLLTGPNMGGKSTFLRQNALITILAQI 677
>gi|166232144|sp|Q1JEH0.1|MUTS_STRPD RecName: Full=DNA mismatch repair protein MutS
gi|94544915|gb|ABF34963.1| DNA mismatch repair protein mutS [Streptococcus pyogenes MGAS10270]
Length = 851
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GVQEYIPNSISF-------------DQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|94989446|ref|YP_597547.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS9429]
gi|94993335|ref|YP_601434.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS2096]
gi|417857677|ref|ZP_12502736.1| DNA mismatch repair protein MutS [Streptococcus pyogenes HKU
QMH11M0907901]
gi|166232142|sp|Q1J9C1.1|MUTS_STRPB RecName: Full=DNA mismatch repair protein MutS
gi|166232143|sp|Q1JJH0.1|MUTS_STRPC RecName: Full=DNA mismatch repair protein MutS
gi|94542954|gb|ABF33003.1| DNA mismatch repair protein [Streptococcus pyogenes MGAS9429]
gi|94546843|gb|ABF36890.1| DNA mismatch repair protein mutS [Streptococcus pyogenes MGAS2096]
gi|387934632|gb|EIK42745.1| DNA mismatch repair protein MutS [Streptococcus pyogenes HKU
QMH11M0907901]
Length = 851
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GVQEYIPNSISF-------------DQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|19746989|ref|NP_608125.1| DNA mismatch repair protein MutS [Streptococcus pyogenes MGAS8232]
gi|25453124|sp|Q8NZ24.1|MUTS_STRP8 RecName: Full=DNA mismatch repair protein MutS
gi|19749244|gb|AAL98624.1| putative DNA mismatch repair protein [Streptococcus pyogenes
MGAS8232]
Length = 851
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GVQEYIPNSISF-------------DQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|306826471|ref|ZP_07459782.1| DNA mismatch repair protein MutS [Streptococcus pyogenes ATCC
10782]
gi|304431330|gb|EFM34328.1| DNA mismatch repair protein MutS [Streptococcus pyogenes ATCC
10782]
Length = 851
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 580 GVQEYIPNSISF-------------DQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 624
>gi|90086235|dbj|BAE91670.1| unnamed protein product [Macaca fascicularis]
Length = 583
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 31/74 (41%), Positives = 43/74 (58%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I L G+Q Y+PNST + ED E V+++TGPNMGGKS+
Sbjct: 311 HPVIDVL-------LGEQDQYVPNSTDLS---EDSER---------VMIITGPNMGGKSS 351
Query: 210 VMRQLGLITILAQM 223
++Q+ LITI+AQ+
Sbjct: 352 YIKQVALITIMAQI 365
>gi|16943735|emb|CAC88688.1| DNA mismatch repair protein [Streptococcus pyogenes]
Length = 164
Score = 49.3 bits (116), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 70 GVQEYIPNSISF-------------DQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 114
>gi|426230068|ref|XP_004009104.1| PREDICTED: DNA mismatch repair protein Msh3 [Ovis aries]
Length = 1119
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 56/108 (51%), Gaps = 31/108 (28%)
Query: 124 IFSQRNILKDMYQQGV-CVPTF------LGLEEPHPYISALESLYPCATGDQ-TYIPNST 175
IFS L + +QGV C PT L HP I L G+Q ++PNST
Sbjct: 821 IFS----LAKVAKQGVYCRPTLQEERKILIKNGRHPVIDVL-------LGEQDQFVPNST 869
Query: 176 VIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ G+ R V+++TGPNMGGKS+ ++Q+ LIT++AQ+
Sbjct: 870 DLS---------GDSER---VMIITGPNMGGKSSYIKQVALITVMAQV 905
>gi|126654328|ref|ZP_01726094.1| DNA mismatch repair protein [Bacillus sp. B14905]
gi|126589231|gb|EAZ83395.1| DNA mismatch repair protein [Bacillus sp. B14905]
Length = 711
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 20/77 (25%)
Query: 147 LEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGG 206
+E HP + + Q Y+PN V+ + ++L+TGPNM G
Sbjct: 456 IEGRHPVVEKM-------LNKQMYVPNDCVL-------------EEQNNMMLITGPNMSG 495
Query: 207 KSTVMRQLGLITILAQM 223
KST MRQ+ LI ++AQM
Sbjct: 496 KSTYMRQVALIVVMAQM 512
>gi|83945036|ref|ZP_00957402.1| DNA mismatch repair protein [Oceanicaulis sp. HTCC2633]
gi|83851818|gb|EAP89673.1| DNA mismatch repair protein [Oceanicaulis sp. HTCC2633]
Length = 895
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 15/73 (20%)
Query: 151 HPYIS-ALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP + ALE +G+ + PN C D G G P ++L+TGPNM GKST
Sbjct: 616 HPVVERALER-----SGEGRFTPNG-----CHLD----GAGGEHPRLMLVTGPNMAGKST 661
Query: 210 VMRQLGLITILAQ 222
+RQ L+ ILAQ
Sbjct: 662 FLRQNALMAILAQ 674
>gi|406026843|ref|YP_006725675.1| DNA mismatch repair protein mutS [Lactobacillus buchneri CD034]
gi|405125332|gb|AFS00093.1| DNA mismatch repair protein mutS [Lactobacillus buchneri CD034]
Length = 862
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 28/76 (36%), Positives = 38/76 (50%), Gaps = 16/76 (21%)
Query: 151 HPYISALESLYPCAT---GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGK 207
H + + +P G Q Y+PN +G ED ++LL+TGPNM GK
Sbjct: 568 HHVVEVKDGRHPVVEKVLGHQQYVPNDVNLG---EDT----------SILLITGPNMSGK 614
Query: 208 STVMRQLGLITILAQM 223
ST MRQ+ L I+ QM
Sbjct: 615 STYMRQMALCVIMNQM 630
>gi|196233654|ref|ZP_03132495.1| DNA mismatch repair protein MutS [Chthoniobacter flavus Ellin428]
gi|196222324|gb|EDY16853.1| DNA mismatch repair protein MutS [Chthoniobacter flavus Ellin428]
Length = 864
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 37/57 (64%), Gaps = 12/57 (21%)
Query: 167 DQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++ ++PN DV GE NR +L+LTGPNM GKST +RQ+ L+T++AQ+
Sbjct: 615 EEKFVPN---------DVLLDGEKNR---LLILTGPNMAGKSTYIRQVALLTLMAQI 659
>gi|432329250|ref|YP_007247394.1| DNA mismatch repair protein MutS [Aciduliprofundum sp. MAR08-339]
gi|432135959|gb|AGB05228.1| DNA mismatch repair protein MutS [Aciduliprofundum sp. MAR08-339]
Length = 829
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 28/63 (44%), Positives = 34/63 (53%), Gaps = 13/63 (20%)
Query: 161 YPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITIL 220
+P ++PN T I GE ++LTGPNM GKST MRQ+ LITIL
Sbjct: 560 HPVVERYTDFVPNDTNIS---------GEAR----FIMLTGPNMAGKSTYMRQVALITIL 606
Query: 221 AQM 223
AQM
Sbjct: 607 AQM 609
>gi|398814314|ref|ZP_10572995.1| DNA mismatch repair protein MutS [Brevibacillus sp. BC25]
gi|398036583|gb|EJL29792.1| DNA mismatch repair protein MutS [Brevibacillus sp. BC25]
Length = 862
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 41/119 (34%), Positives = 61/119 (51%), Gaps = 26/119 (21%)
Query: 106 ICERGGVVDYKPQQSNNTIFSQRNILK-DMYQQGVCVPTFLGLEEPHPYISALESLYPCA 164
+ ER VD Q+ T+ +R ++ ++ + G V T E HP + A+
Sbjct: 533 LAERIASVDV--LQAFATVSDERGFIRPELVENGEYVIT----EGRHPVVEAVLE----- 581
Query: 165 TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ Y+ N DVE + NR+ VLL+TGPNM GKST MRQ+ LIT++AQ+
Sbjct: 582 --REKYVAN---------DVEMD-QTNRQ--VLLITGPNMAGKSTYMRQIALITVMAQI 626
>gi|356529614|ref|XP_003533384.1| PREDICTED: DNA mismatch repair protein Msh6-2-like [Glycine max]
Length = 1116
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 10/65 (15%)
Query: 161 YPCATGDQTY--IPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLIT 218
+P A GD +PN ++G E P LLLTGPNMGGKST++R L
Sbjct: 828 HPFALGDSGCLPVPNDVILGE--------NEDGSHPRTLLLTGPNMGGKSTLLRSTCLAV 879
Query: 219 ILAQM 223
I+AQ+
Sbjct: 880 IMAQL 884
>gi|300711943|ref|YP_003737757.1| DNA mismatch repair protein MutS [Halalkalicoccus jeotgali B3]
gi|448295633|ref|ZP_21485697.1| DNA mismatch repair protein MutS [Halalkalicoccus jeotgali B3]
gi|299125626|gb|ADJ15965.1| DNA mismatch repair protein MutS [Halalkalicoccus jeotgali B3]
gi|445583732|gb|ELY38061.1| DNA mismatch repair protein MutS [Halalkalicoccus jeotgali B3]
Length = 882
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 26/49 (53%), Positives = 33/49 (67%), Gaps = 1/49 (2%)
Query: 176 VIGRCKED-VESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
V+ R +E V +G E + +LTGPNM GKST MRQ+ LITILAQ+
Sbjct: 602 VVERTQESFVPNGAELTPDERLAVLTGPNMSGKSTYMRQIALITILAQI 650
>gi|298242708|ref|ZP_06966515.1| DNA mismatch repair protein MutS [Ktedonobacter racemifer DSM
44963]
gi|297555762|gb|EFH89626.1| DNA mismatch repair protein MutS [Ktedonobacter racemifer DSM
44963]
Length = 893
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 27/58 (46%), Positives = 36/58 (62%), Gaps = 12/58 (20%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
GD +IPN T + EG R ++LLTGPNM GKST +RQ+ LIT++AQ+
Sbjct: 594 GD-VFIPNDTQM--------EADEGRR---IMLLTGPNMAGKSTYLRQVALITLMAQI 639
>gi|349602838|gb|AEP98851.1| DNA mismatch repair protein Msh3-like protein, partial [Equus
caballus]
Length = 590
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 29/74 (39%), Positives = 43/74 (58%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I L G+Q Y+PNST + G+ R V+++TGPNMGGKS+
Sbjct: 411 HPVIDVL-------LGEQDQYVPNSTNLS---------GDSER---VMIITGPNMGGKSS 451
Query: 210 VMRQLGLITILAQM 223
++Q+ LIT++AQ+
Sbjct: 452 YIKQVALITVMAQI 465
>gi|307152088|ref|YP_003887472.1| DNA mismatch repair protein MutS [Cyanothece sp. PCC 7822]
gi|306982316|gb|ADN14197.1| DNA mismatch repair protein MutS [Cyanothece sp. PCC 7822]
Length = 892
Score = 48.9 bits (115), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%)
Query: 170 YIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++PNST +G S G P +++LTGPN GKS +RQ+GLI ++AQ+
Sbjct: 641 FVPNSTNLGSLPPSKISEGNNQDYPDLIILTGPNASGKSCYLRQVGLIQLMAQI 694
>gi|357637688|ref|ZP_09135563.1| DNA mismatch repair protein MutS [Streptococcus macacae NCTC 11558]
gi|357586142|gb|EHJ53345.1| DNA mismatch repair protein MutS [Streptococcus macacae NCTC 11558]
Length = 849
Score = 48.9 bits (115), Expect = 0.001, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS + K ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GIQEYIPNSIYF-------------DSKTSIQLITGPNMSGKSTYMRQLALAVIMAQI 624
>gi|418938171|ref|ZP_13491733.1| DNA mismatch repair protein mutS [Rhizobium sp. PDO1-076]
gi|375055172|gb|EHS51445.1| DNA mismatch repair protein mutS [Rhizobium sp. PDO1-076]
Length = 911
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 24/39 (61%), Positives = 28/39 (71%), Gaps = 4/39 (10%)
Query: 185 ESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+SGG G + LLTGPNMGGKST +RQ LI I+AQM
Sbjct: 650 KSGGNG----AIWLLTGPNMGGKSTFLRQNALIAIMAQM 684
>gi|197118138|ref|YP_002138565.1| DNA mismatch repair protein MutS [Geobacter bemidjiensis Bem]
gi|238690862|sp|B5EA63.1|MUTS_GEOBB RecName: Full=DNA mismatch repair protein MutS
gi|197087498|gb|ACH38769.1| DNA mismatch repair ATPase MutS-1 [Geobacter bemidjiensis Bem]
Length = 837
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 19/76 (25%)
Query: 148 EEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGK 207
E HP I + S + ++PN T++ N + ++++TGPNM GK
Sbjct: 587 EGRHPVIDDMHS-------SERFVPNDTLLD------------NGENQLIIITGPNMAGK 627
Query: 208 STVMRQLGLITILAQM 223
ST MRQ+ LI+++AQM
Sbjct: 628 STFMRQVALISLMAQM 643
>gi|428319738|ref|YP_007117620.1| DNA mismatch repair protein MutS [Oscillatoria nigro-viridis PCC
7112]
gi|428243418|gb|AFZ09204.1| DNA mismatch repair protein MutS [Oscillatoria nigro-viridis PCC
7112]
Length = 875
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/90 (34%), Positives = 44/90 (48%), Gaps = 15/90 (16%)
Query: 137 QGVCVPTFLGLEEPHPYISALESLYPCATGD---QTYIPNSTVIGRCKEDVESGGEGNRK 193
Q C PT E I +E +P ++PNS +GR K +
Sbjct: 606 QNYCRPTMTESRE----IKIIEGCHPVVEKSLPPGFFVPNSAFLGREK--------SLNR 653
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
P +++LTGPN GKS +RQ+GLI ++AQM
Sbjct: 654 PDLIILTGPNASGKSCYLRQVGLIQLMAQM 683
>gi|302772959|ref|XP_002969897.1| hypothetical protein SELMODRAFT_30474 [Selaginella moellendorffii]
gi|300162408|gb|EFJ29021.1| hypothetical protein SELMODRAFT_30474 [Selaginella moellendorffii]
Length = 876
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 12/60 (20%)
Query: 164 ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+T ++PN TV+ GEG R ++TGPNMGGKS +RQ+ LITI++Q+
Sbjct: 647 STLQDAFVPNDTVLS---------GEGERSQ---IITGPNMGGKSCYIRQVALITIMSQI 694
>gi|302823252|ref|XP_002993280.1| hypothetical protein SELMODRAFT_136810 [Selaginella moellendorffii]
gi|300138950|gb|EFJ05701.1| hypothetical protein SELMODRAFT_136810 [Selaginella moellendorffii]
Length = 942
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 25/60 (41%), Positives = 36/60 (60%), Gaps = 12/60 (20%)
Query: 164 ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+T ++PN TV+ GEG R ++TGPNMGGKS +RQ+ LITI++Q+
Sbjct: 670 STLQDAFVPNDTVLS---------GEGERSQ---IITGPNMGGKSCYIRQVALITIMSQI 717
>gi|170744569|ref|YP_001773224.1| DNA mismatch repair protein MutS [Methylobacterium sp. 4-46]
gi|168198843|gb|ACA20790.1| DNA mismatch repair protein MutS [Methylobacterium sp. 4-46]
Length = 962
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 23/46 (50%), Positives = 28/46 (60%)
Query: 178 GRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
GR G G +L++TGPNMGGKST +RQ LI +LAQM
Sbjct: 690 GREAGSGREAGSGREAGRILVVTGPNMGGKSTFLRQNALIAVLAQM 735
>gi|320101926|ref|YP_004177517.1| DNA mismatch repair protein MutS [Isosphaera pallida ATCC 43644]
gi|319749208|gb|ADV60968.1| DNA mismatch repair protein MutS [Isosphaera pallida ATCC 43644]
Length = 896
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 26/54 (48%), Positives = 34/54 (62%), Gaps = 12/54 (22%)
Query: 170 YIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+IPN D++ GG+ T+LLLTGPNM GKST +RQ ++ ILAQM
Sbjct: 602 FIPN---------DLDLGGDSG---TILLLTGPNMAGKSTYIRQAAVLCILAQM 643
>gi|310642433|ref|YP_003947191.1| DNA mismatch repair protein muts [Paenibacillus polymyxa SC2]
gi|386041503|ref|YP_005960457.1| DNA mismatch repair protein mutS [Paenibacillus polymyxa M1]
gi|309247383|gb|ADO56950.1| DNA mismatch repair protein MutS [Paenibacillus polymyxa SC2]
gi|343097541|emb|CCC85750.1| DNA mismatch repair protein mutS [Paenibacillus polymyxa M1]
Length = 966
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 35/105 (33%), Positives = 54/105 (51%), Gaps = 22/105 (20%)
Query: 119 QSNNTIFSQRNILKDMYQQGVCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIG 178
QS T+ ++R +K G F+ + HP + A+ D +I N+TV+
Sbjct: 578 QSLATVSAERGFVKPELTTGY---DFVVEQGRHPVVEAV-------MKDGGFIANNTVL- 626
Query: 179 RCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
E+ ++ +LL+TGPNM GKST MRQ+ LI I+AQ+
Sbjct: 627 ---EEADA--------HILLITGPNMAGKSTYMRQVALIAIMAQI 660
>gi|156743470|ref|YP_001433599.1| DNA mismatch repair protein MutS [Roseiflexus castenholzii DSM
13941]
gi|189083187|sp|A7NPT5.1|MUTS_ROSCS RecName: Full=DNA mismatch repair protein MutS
gi|156234798|gb|ABU59581.1| DNA mismatch repair protein MutS [Roseiflexus castenholzii DSM
13941]
Length = 1088
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 26/59 (44%), Positives = 37/59 (62%), Gaps = 12/59 (20%)
Query: 165 TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
T D+T+IPN D+E E + + L+TGPNM GKSTV+RQ+ LI ++AQ+
Sbjct: 792 TLDETFIPN---------DIEMDTETRQ---ICLITGPNMSGKSTVLRQVALIALMAQI 838
>gi|417901337|ref|ZP_12545213.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21266]
gi|341845176|gb|EGS86378.1| DNA mismatch repair protein MutS [Staphylococcus aureus subsp.
aureus 21266]
Length = 872
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 46/94 (48%), Gaps = 20/94 (21%)
Query: 140 CVPTFLGLEEPHPYI----------SALESLYPCATGDQTYIPNSTVIGRCKEDVESGGE 189
C+ +F + + + YI +ES +P Y N V C+ D E+
Sbjct: 541 CLQSFAEIAQKYNYIRPSFSENKTLELVESRHPVVERVMDY--NDYVPNNCRLDNET--- 595
Query: 190 GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ L+TGPNM GKST MRQ+ +I+I+AQM
Sbjct: 596 -----FIYLITGPNMSGKSTYMRQVAIISIMAQM 624
>gi|414564975|ref|YP_006043936.1| DNA mismatch repair protein MutS [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
gi|338848040|gb|AEJ26252.1| DNA mismatch repair protein MutS [Streptococcus equi subsp.
zooepidemicus ATCC 35246]
Length = 837
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS G + ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 571 GVQEYIPNSISFGP-------------QTSIQLITGPNMSGKSTYMRQLALTVIMAQI 615
>gi|195978976|ref|YP_002124220.1| DNA mismatch repair protein MutS [Streptococcus equi subsp.
zooepidemicus MGCS10565]
gi|195975681|gb|ACG63207.1| DNA mismatch repair protein MutS [Streptococcus equi subsp.
zooepidemicus MGCS10565]
Length = 837
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS G + ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 571 GVQEYIPNSISFGP-------------QTSIQLITGPNMSGKSTYMRQLALTVIMAQI 615
>gi|225869421|ref|YP_002745369.1| DNA mismatch repair protein MutS [Streptococcus equi subsp.
zooepidemicus]
gi|259511175|sp|C0MGC5.1|MUTS_STRS7 RecName: Full=DNA mismatch repair protein MutS
gi|225702697|emb|CAX00811.1| DNA mismatch repair protein MutS [Streptococcus equi subsp.
zooepidemicus]
Length = 851
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS G + ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GVQEYIPNSISFGP-------------QTSIQLITGPNMSGKSTYMRQLALTVIMAQI 624
>gi|424842045|ref|ZP_18266670.1| DNA mismatch repair protein MutS [Saprospira grandis DSM 2844]
gi|395320243|gb|EJF53164.1| DNA mismatch repair protein MutS [Saprospira grandis DSM 2844]
Length = 884
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 37/121 (30%), Positives = 55/121 (45%), Gaps = 29/121 (23%)
Query: 114 DY-KPQQSNNTIFSQRNILKDMY----QQGVCVPTFL-GLE-----EPHPYISALESLYP 162
DY +P Q+N + +Q + L + +Q C P GLE HP I
Sbjct: 544 DYIRPVQTNAQLVAQLDCLHSYHVLALEQNYCRPQMHEGLEIEIKAGRHPVIE------Q 597
Query: 163 CATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
+ Y+PN + N + VL++TGPNM GKS ++RQ LI+++AQ
Sbjct: 598 QLKAGELYVPNDIFLD------------NERQQVLMITGPNMSGKSALLRQTALISLMAQ 645
Query: 223 M 223
M
Sbjct: 646 M 646
>gi|226312963|ref|YP_002772857.1| DNA mismatch repair protein MutS [Brevibacillus brevis NBRC 100599]
gi|254766617|sp|C0ZEZ4.1|MUTS_BREBN RecName: Full=DNA mismatch repair protein MutS
gi|226095911|dbj|BAH44353.1| DNA mismatch repair protein MutS [Brevibacillus brevis NBRC 100599]
Length = 862
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 25/41 (60%), Positives = 32/41 (78%), Gaps = 3/41 (7%)
Query: 183 DVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
DVE + NR+ VLL+TGPNM GKST MRQ+ LIT++AQ+
Sbjct: 589 DVEMD-QTNRQ--VLLITGPNMAGKSTYMRQIALITVMAQI 626
>gi|365758493|gb|EHN00331.1| Msh2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 964
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 17/84 (20%)
Query: 150 PHPYISALESLYPCATGDQTYIPNSTV--------IGRCKEDV--ESGGEGNRKPTVLLL 199
P PYI L+P + +T++ NS I DV ESG K L++
Sbjct: 634 PIPYIRP--KLHPMDSERKTHLVNSRHPVLEMQDDISFISNDVTLESG-----KGDFLII 686
Query: 200 TGPNMGGKSTVMRQLGLITILAQM 223
TGPNMGGKST +RQ+G+I+++AQ+
Sbjct: 687 TGPNMGGKSTYIRQVGVISLMAQI 710
>gi|225871419|ref|YP_002747366.1| DNA mismatch repair protein MutS [Streptococcus equi subsp. equi
4047]
gi|254766638|sp|C0MAS5.1|MUTS_STRE4 RecName: Full=DNA mismatch repair protein MutS
gi|225700823|emb|CAW95529.1| DNA mismatch repair protein MutS [Streptococcus equi subsp. equi
4047]
Length = 851
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS G + ++ L+TGPNM GKST MRQL L I+AQ+
Sbjct: 580 GVQEYIPNSISFGP-------------QTSIQLITGPNMSGKSTYMRQLALTVIMAQI 624
>gi|348689982|gb|EGZ29796.1| hypothetical protein PHYSODRAFT_261139 [Phytophthora sojae]
Length = 814
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 43/88 (48%), Gaps = 17/88 (19%)
Query: 138 GVCVPTFLGLEEPHPYISALESLYPCATGDQT--YIPNSTVIGRCKEDVESGGEGNRKPT 195
G C PT LE+ I + +PC + +IPN R K +
Sbjct: 514 GYCRPT---LEQDGDCIVLTSARHPCVELQDSVDFIPNDYNFEREKSRFQ---------- 560
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
L+TGPNMGGKST +RQLG I ++AQ+
Sbjct: 561 --LVTGPNMGGKSTYIRQLGTIAVMAQI 586
>gi|333370923|ref|ZP_08462893.1| DNA mismatch repair protein MutS [Desmospora sp. 8437]
gi|332976873|gb|EGK13695.1| DNA mismatch repair protein MutS [Desmospora sp. 8437]
Length = 890
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 19/73 (26%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + A AT + ++PN T + D E + +LL+TGPNM GKST
Sbjct: 607 HPVVEA-------ATREGEFVPNDT-----RMDQE-------EHQLLLITGPNMAGKSTY 647
Query: 211 MRQLGLITILAQM 223
MRQ+ LIT++AQ+
Sbjct: 648 MRQVALITLMAQI 660
>gi|168010740|ref|XP_001758062.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690939|gb|EDQ77304.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1109
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 32/88 (36%), Positives = 45/88 (51%), Gaps = 13/88 (14%)
Query: 137 QGVCVPTFLGLEEPHPY-ISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPT 195
QG P F+G +P I+A AT ++PN T + KE +
Sbjct: 777 QGYVRPEFVGKCDPSQLLITAGRHPVLDATLQDGFVPNDTYLQADKERCQ---------- 826
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
++TGPNMGGKS +RQ+ LITI+AQ+
Sbjct: 827 --IITGPNMGGKSCYIRQVALITIMAQV 852
>gi|401840373|gb|EJT43216.1| MSH2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 964
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/84 (39%), Positives = 47/84 (55%), Gaps = 17/84 (20%)
Query: 150 PHPYISALESLYPCATGDQTYIPNSTV--------IGRCKEDV--ESGGEGNRKPTVLLL 199
P PYI L+P + +T++ NS I DV ESG K L++
Sbjct: 634 PIPYIRP--KLHPMDSERKTHLVNSRHPVLEMQDDISFISNDVTLESG-----KGDFLII 686
Query: 200 TGPNMGGKSTVMRQLGLITILAQM 223
TGPNMGGKST +RQ+G+I+++AQ+
Sbjct: 687 TGPNMGGKSTYIRQVGVISLMAQI 710
>gi|330718390|ref|ZP_08312990.1| DNA mismatch repair protein MutS [Leuconostoc fallax KCTC 3537]
Length = 831
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 21/33 (63%), Positives = 27/33 (81%)
Query: 191 NRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+++ T+ L+TGPNM GKST MR+L LI ILAQM
Sbjct: 568 DKQTTIQLITGPNMAGKSTYMRELALIVILAQM 600
>gi|403220570|dbj|BAM38703.1| uncharacterized protein TOT_010001218 [Theileria orientalis strain
Shintoku]
Length = 1014
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/69 (37%), Positives = 39/69 (56%), Gaps = 12/69 (17%)
Query: 158 ESLYPCATGDQT---YIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQL 214
+S+YP + T ++PN IG D E ++++TGPNMGGKST++RQ+
Sbjct: 747 DSVYPLFAANSTSTGFVPNDVCIG----DFEECA-----TPIIVITGPNMGGKSTLLRQI 797
Query: 215 GLITILAQM 223
L I+ QM
Sbjct: 798 ALTVIMGQM 806
>gi|260665334|ref|ZP_05866182.1| DNA mismatch repair protein MutS [Lactobacillus jensenii SJ-7A-US]
gi|260560838|gb|EEX26814.1| DNA mismatch repair protein MutS [Lactobacillus jensenii SJ-7A-US]
Length = 854
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 13/84 (15%)
Query: 140 CVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLL 199
C P+F + I+ + D +YIPN D++ + +V L+
Sbjct: 552 CRPSFHQDSQEIKVIAGRHPVVEKVLADGSYIPN---------DIQMADD----TSVFLI 598
Query: 200 TGPNMGGKSTVMRQLGLITILAQM 223
TGPNM GKST MRQ+ LI ++AQ+
Sbjct: 599 TGPNMSGKSTYMRQMALIAVMAQV 622
>gi|452995322|emb|CCQ93092.1| DNA mismatch repair protein MutS [Clostridium ultunense Esp]
Length = 871
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/73 (35%), Positives = 40/73 (54%), Gaps = 15/73 (20%)
Query: 154 ISALESLYPCATG---DQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
I+ +E +P D T++PN T I N+ + ++TGPNM GKST
Sbjct: 587 INIIEGRHPVVETTLVDGTFVPNDTYID------------NKDNRIQIITGPNMAGKSTY 634
Query: 211 MRQLGLITILAQM 223
MRQ+ +IT++AQ+
Sbjct: 635 MRQVAIITLMAQI 647
>gi|418974046|ref|ZP_13521981.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
ATCC BAA-960]
gi|383346023|gb|EID24099.1| DNA mismatch repair protein MutS [Streptococcus pseudopneumoniae
ATCC BAA-960]
Length = 844
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 26/58 (44%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPN+ + ED ++ L+TGPNM GKST MRQL + I+AQ+
Sbjct: 580 GAQTYIPNTIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAIMAQL 624
>gi|218885459|ref|YP_002434780.1| DNA mismatch repair protein MutS [Desulfovibrio vulgaris str.
'Miyazaki F']
gi|218756413|gb|ACL07312.1| DNA mismatch repair protein MutS [Desulfovibrio vulgaris str.
'Miyazaki F']
Length = 910
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 27/76 (35%), Positives = 38/76 (50%), Gaps = 20/76 (26%)
Query: 148 EEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGK 207
E HP + A++ G +IPN + + +LL+TGPNM GK
Sbjct: 595 EGRHPVVEAMQ-------GSANFIPNDLRMDEARR-------------LLLITGPNMAGK 634
Query: 208 STVMRQLGLITILAQM 223
STV+RQ +I +LAQM
Sbjct: 635 STVLRQTAIICLLAQM 650
>gi|190890059|ref|YP_001976601.1| DNA mismatch repair protein MutS [Rhizobium etli CIAT 652]
gi|190695338|gb|ACE89423.1| DNA mismatch repair protein [Rhizobium etli CIAT 652]
Length = 908
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 23/38 (60%), Positives = 27/38 (71%)
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
S +G + + LLTGPNMGGKST +RQ LI ILAQM
Sbjct: 647 SPKDGAKDGAIWLLTGPNMGGKSTFLRQNALIAILAQM 684
>gi|309791040|ref|ZP_07685576.1| DNA mismatch repair protein MutS [Oscillochloris trichoides DG-6]
gi|308226895|gb|EFO80587.1| DNA mismatch repair protein MutS [Oscillochloris trichoides DG6]
Length = 996
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 29/73 (39%), Positives = 41/73 (56%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + E + P +T++PN +I D S +L++TGPNM GKSTV
Sbjct: 712 HPVV---EQMIP-----ETFVPNDILI-----DTTSA-------QMLIITGPNMSGKSTV 751
Query: 211 MRQLGLITILAQM 223
MRQ+ LI +LAQ+
Sbjct: 752 MRQVALIVLLAQI 764
>gi|299753991|ref|XP_001833680.2| DNA mismatch repair protein MSH3 [Coprinopsis cinerea okayama7#130]
gi|298410557|gb|EAU88225.2| DNA mismatch repair protein MSH3 [Coprinopsis cinerea okayama7#130]
Length = 1096
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/77 (37%), Positives = 39/77 (50%), Gaps = 20/77 (25%)
Query: 147 LEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGG 206
+E HP I L D YIPNS +G +KP ++TGPNMGG
Sbjct: 817 VEGRHPMIERLR--------DTPYIPNSICMG------------GKKPRSKIITGPNMGG 856
Query: 207 KSTVMRQLGLITILAQM 223
KS+ +R + LI I+AQ+
Sbjct: 857 KSSCVRTIALIAIMAQI 873
>gi|238855606|ref|ZP_04645907.1| DNA mismatch repair protein MutS [Lactobacillus jensenii 269-3]
gi|313473091|ref|ZP_07813575.1| DNA mismatch repair protein MutS [Lactobacillus jensenii 1153]
gi|238831750|gb|EEQ24086.1| DNA mismatch repair protein MutS [Lactobacillus jensenii 269-3]
gi|313448795|gb|EEQ67673.2| DNA mismatch repair protein MutS [Lactobacillus jensenii 1153]
Length = 860
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/84 (33%), Positives = 42/84 (50%), Gaps = 13/84 (15%)
Query: 140 CVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLL 199
C P+F + I+ + D +YIPN D++ + +V L+
Sbjct: 558 CRPSFHQDSQEIKVIAGRHPVVEKVLADGSYIPN---------DIQMADD----TSVFLI 604
Query: 200 TGPNMGGKSTVMRQLGLITILAQM 223
TGPNM GKST MRQ+ LI ++AQ+
Sbjct: 605 TGPNMSGKSTYMRQMALIAVMAQV 628
>gi|85093179|ref|XP_959643.1| hypothetical protein NCU02230 [Neurospora crassa OR74A]
gi|3914053|sp|O13396.1|MSH2_NEUCR RecName: Full=DNA mismatch repair protein msh-2
gi|2606088|gb|AAB84225.1| DNA mismatch repair protein [Neurospora crassa]
gi|28921089|gb|EAA30407.1| hypothetical protein NCU02230 [Neurospora crassa OR74A]
Length = 937
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 14/68 (20%)
Query: 158 ESLYPC--ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLG 215
E+ +PC D T+I N + R ED + L++TGPNMGGKST +RQ+G
Sbjct: 626 EARHPCMEVQDDVTFITNDVTLTR--ED----------SSFLIITGPNMGGKSTYIRQIG 673
Query: 216 LITILAQM 223
+I ++AQ+
Sbjct: 674 VIALMAQI 681
>gi|355704534|gb|AES02259.1| mutS-like protein 3 [Mustela putorius furo]
Length = 418
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I L G+Q Y+PNST + G+ R V+++TGPNMGGKS+
Sbjct: 147 HPVIDML-------LGEQDQYVPNSTNLS---------GDSER---VMIITGPNMGGKSS 187
Query: 210 VMRQLGLITILAQM 223
++Q+ LITI+AQ+
Sbjct: 188 YIKQVALITIMAQI 201
>gi|336467575|gb|EGO55739.1| hypothetical protein NEUTE1DRAFT_124099 [Neurospora tetrasperma
FGSC 2508]
gi|350287773|gb|EGZ69009.1| DNA mismatch repair protein msh-2 [Neurospora tetrasperma FGSC
2509]
Length = 937
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/68 (39%), Positives = 40/68 (58%), Gaps = 14/68 (20%)
Query: 158 ESLYPC--ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLG 215
E+ +PC D T+I N + R ED + L++TGPNMGGKST +RQ+G
Sbjct: 626 EARHPCMEVQDDVTFITNDVTLTR--ED----------SSFLIITGPNMGGKSTYIRQIG 673
Query: 216 LITILAQM 223
+I ++AQ+
Sbjct: 674 VIALMAQI 681
>gi|347753700|ref|YP_004861265.1| DNA mismatch repair protein MutS [Bacillus coagulans 36D1]
gi|347586218|gb|AEP02485.1| DNA mismatch repair protein MutS [Bacillus coagulans 36D1]
Length = 875
Score = 48.9 bits (115), Expect = 0.002, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q+Y+PN ++ +E +LL+TGPNM GKST MRQ+ L ILAQ+
Sbjct: 598 QSYVPNDCLMDENRE-------------ILLITGPNMSGKSTYMRQIALTVILAQI 640
>gi|406667384|ref|ZP_11075142.1| DNA mismatch repair protein mutS [Bacillus isronensis B3W22]
gi|405384752|gb|EKB44193.1| DNA mismatch repair protein mutS [Bacillus isronensis B3W22]
Length = 871
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/77 (36%), Positives = 39/77 (50%), Gaps = 20/77 (25%)
Query: 147 LEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGG 206
+E HP + + Q+Y+PN V+ K ++L+TGPNM G
Sbjct: 571 IEGRHPVVEKM-------LNKQSYVPNDCVLTIDK-------------NMMLITGPNMSG 610
Query: 207 KSTVMRQLGLITILAQM 223
KST MRQ+ LI +LAQM
Sbjct: 611 KSTYMRQVALIVVLAQM 627
>gi|331701278|ref|YP_004398237.1| DNA mismatch repair protein mutS [Lactobacillus buchneri NRRL
B-30929]
gi|329128621|gb|AEB73174.1| DNA mismatch repair protein mutS [Lactobacillus buchneri NRRL
B-30929]
Length = 862
Score = 48.9 bits (115), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN +G ED ++LL+TGPNM GKST MRQ+ L I+ QM
Sbjct: 586 GHQQYVPNDVNLG---EDT----------SILLITGPNMSGKSTYMRQMALCVIMNQM 630
>gi|336367106|gb|EGN95451.1| hypothetical protein SERLA73DRAFT_59941 [Serpula lacrymans var.
lacrymans S7.3]
Length = 913
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 26/94 (27%)
Query: 136 QQGVCVPTFLG------LEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGE 189
Q G P F +E HP + AL S ++PNS ++ GG+
Sbjct: 726 QDGYVRPQFTDEDKLEIIEGRHPMVEALRS--------DPFVPNS---------IDMGGD 768
Query: 190 GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+P+ ++TGPNMGGKS+ +R + LI+I+AQ+
Sbjct: 769 ---EPSSKIITGPNMGGKSSAVRMVALISIMAQI 799
>gi|403234715|ref|ZP_10913301.1| DNA mismatch repair protein MutS [Bacillus sp. 10403023]
Length = 351
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/56 (46%), Positives = 35/56 (62%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q Y+PN V+ E +R ++LL+TGPNM GKST MRQ+ L +ILAQ+
Sbjct: 72 QEYVPNDCVM-----------EHDR--SLLLITGPNMSGKSTYMRQIALTSILAQI 114
>gi|312872874|ref|ZP_07732936.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF
2062A-h1]
gi|311091608|gb|EFQ49990.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF
2062A-h1]
Length = 854
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + + S D+ YIPN DV+ + N + L+TGPNM GKST
Sbjct: 577 HPVVEKVMS-------DEEYIPN---------DVKMDEQTN----IFLITGPNMSGKSTY 616
Query: 211 MRQLGLITILAQM 223
MRQL LI I+AQ+
Sbjct: 617 MRQLALIIIMAQI 629
>gi|312875171|ref|ZP_07735184.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF 2053A-b]
gi|311089278|gb|EFQ47709.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF 2053A-b]
Length = 854
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + + S D+ YIPN DV+ + N + L+TGPNM GKST
Sbjct: 577 HPVVEKVMS-------DEEYIPN---------DVKMDEQTN----IFLITGPNMSGKSTY 616
Query: 211 MRQLGLITILAQM 223
MRQL LI I+AQ+
Sbjct: 617 MRQLALIIIMAQI 629
>gi|346321824|gb|EGX91423.1| DNA mismatch repair protein Msh3 [Cordyceps militaris CM01]
Length = 1099
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 35/92 (38%), Positives = 45/92 (48%), Gaps = 19/92 (20%)
Query: 136 QQGVCVPTFLGLEEPHPYISALESLYPCATGDQT----YIPNSTVIGRCKEDVESGGEGN 191
Q G P FL P P I+ +P A +QT YIP ST + +
Sbjct: 821 QPGYTCPEFLPSSAP-PTIAITGGRHPMA--EQTLAGGYIPFSTTLA------------H 865
Query: 192 RKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
P L+TGPNMGGKS+ +R L LI +LAQ+
Sbjct: 866 PTPRAHLVTGPNMGGKSSFVRALALIVLLAQV 897
>gi|309805603|ref|ZP_07699646.1| DNA mismatch repair protein MutS [Lactobacillus iners LactinV
09V1-c]
gi|308165104|gb|EFO67344.1| DNA mismatch repair protein MutS [Lactobacillus iners LactinV
09V1-c]
Length = 776
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + + S D+ YIPN DV+ + N + L+TGPNM GKST
Sbjct: 577 HPVVEKVMS-------DEEYIPN---------DVKMDEQTN----IFLITGPNMSGKSTY 616
Query: 211 MRQLGLITILAQM 223
MRQL LI I+AQ+
Sbjct: 617 MRQLALIIIMAQI 629
>gi|338741596|ref|YP_004678558.1| DNA mismatch repair protein mutS [Hyphomicrobium sp. MC1]
gi|337762159|emb|CCB67994.1| DNA mismatch repair protein mutS [Hyphomicrobium sp. MC1]
Length = 947
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 36/60 (60%), Gaps = 3/60 (5%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPT--VLLLTGPNMGGKSTVMRQLGLITILAQM 223
G +I N ++GR E+ + N P + L+TGPNM GKST +RQ LIT++AQM
Sbjct: 652 GGTAFIENDCILGRSGTP-EAHPDENELPDARIWLVTGPNMAGKSTFLRQNALITVMAQM 710
>gi|313574717|emb|CBX26211.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
Length = 439
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 190 GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G + + LLTGPNMGGKST +RQ LITILAQ+
Sbjct: 302 GGKNGAIWLLTGPNMGGKSTFLRQNALITILAQI 335
>gi|336113900|ref|YP_004568667.1| DNA mismatch repair protein MutS [Bacillus coagulans 2-6]
gi|335367330|gb|AEH53281.1| DNA mismatch repair protein MutS [Bacillus coagulans 2-6]
Length = 858
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 24/56 (42%), Positives = 33/56 (58%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q+Y+PN ++ +E +LL+TGPNM GKST MRQ+ L ILAQ+
Sbjct: 581 QSYVPNDCLMDENRE-------------ILLITGPNMSGKSTYMRQIALTVILAQI 623
>gi|317495810|ref|ZP_07954173.1| DNA mismatch repair protein MutS [Gemella morbillorum M424]
gi|316913987|gb|EFV35470.1| DNA mismatch repair protein MutS [Gemella morbillorum M424]
Length = 881
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 31/73 (42%), Positives = 38/73 (52%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCA---TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
I +E +P D YI N CK D ++ +LL+TGPNM GKST
Sbjct: 536 IDIIEGRHPIVERNVSDDGYISND-----CKVDKDN--------NILLITGPNMSGKSTY 582
Query: 211 MRQLGLITILAQM 223
MRQL LI ILAQ+
Sbjct: 583 MRQLALIVILAQI 595
>gi|309805987|ref|ZP_07700013.1| DNA mismatch repair protein MutS [Lactobacillus iners LactinV
03V1-b]
gi|308167590|gb|EFO69743.1| DNA mismatch repair protein MutS [Lactobacillus iners LactinV
03V1-b]
Length = 854
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + + S D+ YIPN DV+ + N + L+TGPNM GKST
Sbjct: 577 HPVVEKVMS-------DEEYIPN---------DVKMDEQTN----IFLITGPNMSGKSTY 616
Query: 211 MRQLGLITILAQM 223
MRQL LI I+AQ+
Sbjct: 617 MRQLALIIIMAQI 629
>gi|417907776|ref|ZP_12551543.1| DNA mismatch repair protein MutS [Staphylococcus capitis VCU116]
gi|341594863|gb|EGS37541.1| DNA mismatch repair protein MutS [Staphylococcus capitis VCU116]
Length = 869
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 12/90 (13%)
Query: 140 CVPTFLGLEEPHPYISALESLYPCATGDQT-YIPNST--VIGRCKED---VESGGEGNRK 193
C+ +F + + + Y+ P + D+T ++ NS V+ R + V + N
Sbjct: 540 CLQSFAEIAQKYNYVR------PSFSDDKTLHLENSRHPVVERVMDHNDYVPNDCSLNND 593
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ L+TGPNM GKST MRQ+ +I+I+AQM
Sbjct: 594 TFIYLITGPNMSGKSTYMRQIAIISIMAQM 623
>gi|313574699|emb|CBX26202.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
gi|313574701|emb|CBX26203.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
gi|313574705|emb|CBX26205.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
gi|313574707|emb|CBX26206.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
gi|313574709|emb|CBX26207.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
gi|313574711|emb|CBX26208.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
gi|313574719|emb|CBX26212.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
Length = 439
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 190 GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G + + LLTGPNMGGKST +RQ LITILAQ+
Sbjct: 302 GGKNGAIWLLTGPNMGGKSTFLRQNALITILAQI 335
>gi|426403908|ref|YP_007022879.1| DNA mismatch repair protein MutS [Bdellovibrio bacteriovorus str.
Tiberius]
gi|425860576|gb|AFY01612.1| DNA mismatch repair protein MutS [Bdellovibrio bacteriovorus str.
Tiberius]
Length = 834
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 22/32 (68%), Positives = 26/32 (81%)
Query: 192 RKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
R+ + LLLTGPNM GKST+MRQ+ L ILAQM
Sbjct: 567 RQHSCLLLTGPNMAGKSTLMRQVALNAILAQM 598
>gi|312873745|ref|ZP_07733790.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF 2052A-d]
gi|311090743|gb|EFQ49142.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF 2052A-d]
Length = 854
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + + S D+ YIPN DV+ + N + L+TGPNM GKST
Sbjct: 577 HPVVEKVMS-------DEEYIPN---------DVKMDEQTN----IFLITGPNMSGKSTY 616
Query: 211 MRQLGLITILAQM 223
MRQL LI I+AQ+
Sbjct: 617 MRQLALIIIMAQI 629
>gi|260893758|ref|YP_003239855.1| DNA mismatch repair protein MutS [Ammonifex degensii KC4]
gi|260865899|gb|ACX53005.1| DNA mismatch repair protein MutS [Ammonifex degensii KC4]
Length = 865
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 26/60 (43%), Positives = 35/60 (58%), Gaps = 12/60 (20%)
Query: 164 ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
A G ++PN T +G G R V ++TGPNMGGKST MRQ+ LI ++AQ+
Sbjct: 590 ALGPGNFVPNDTWLG---------GPDKR---VAIITGPNMGGKSTYMRQVALIVLMAQI 637
>gi|170076810|ref|YP_001733448.1| DNA mismatch repair protein MutS [Synechococcus sp. PCC 7002]
gi|169884479|gb|ACA98192.1| DNA mismatch repair protein MutS [Synechococcus sp. PCC 7002]
Length = 881
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 34/54 (62%), Gaps = 9/54 (16%)
Query: 170 YIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++PNST +GR + N P +++LTGPN GKS +RQ GLI ++AQ+
Sbjct: 639 FVPNSTYLGRTQ---------NSYPDLIILTGPNASGKSCYLRQTGLIQLMAQV 683
>gi|336379827|gb|EGO20981.1| hypothetical protein SERLADRAFT_441366 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1060
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 48/94 (51%), Gaps = 26/94 (27%)
Query: 136 QQGVCVPTFLG------LEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGE 189
Q G P F +E HP + AL S ++PNS ++ GG+
Sbjct: 803 QDGYVRPQFTDEDKLEIIEGRHPMVEALRS--------DPFVPNS---------IDMGGD 845
Query: 190 GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+P+ ++TGPNMGGKS+ +R + LI+I+AQ+
Sbjct: 846 ---EPSSKIITGPNMGGKSSAVRMVALISIMAQI 876
>gi|315653064|ref|ZP_07905992.1| DNA mismatch repair protein HexA [Lactobacillus iners ATCC 55195]
gi|315489599|gb|EFU79233.1| DNA mismatch repair protein HexA [Lactobacillus iners ATCC 55195]
Length = 854
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + + S D+ YIPN DV+ + N + L+TGPNM GKST
Sbjct: 577 HPVVEKVMS-------DEEYIPN---------DVKMDEQTN----IFLITGPNMSGKSTY 616
Query: 211 MRQLGLITILAQM 223
MRQL LI I+AQ+
Sbjct: 617 MRQLALIIIMAQI 629
>gi|221505747|gb|EEE31392.1| DNA mismatch repair protein, putative [Toxoplasma gondii VEG]
Length = 1682
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 139 VCVPTFLGLEEPHPYISALESL-YPCA-TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTV 196
+C PT + E P I AL++ +P A T ++PN + + G K T
Sbjct: 1363 MCRPTIVEAREDAPPILALKNCRHPVAETLMDNFVPNDVYL--------NCGPHESKRT- 1413
Query: 197 LLLTGPNMGGKSTVMRQLGLITILAQM 223
LL+TGPNMGGKST++RQ L ++AQ+
Sbjct: 1414 LLITGPNMGGKSTLLRQAALCVVMAQV 1440
>gi|237838321|ref|XP_002368458.1| DNA mismatch repair protein, putative [Toxoplasma gondii ME49]
gi|211966122|gb|EEB01318.1| DNA mismatch repair protein, putative [Toxoplasma gondii ME49]
Length = 1607
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 139 VCVPTFLGLEEPHPYISALESL-YPCA-TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTV 196
+C PT + E P I AL++ +P A T ++PN + + G K T
Sbjct: 1288 MCRPTIVEAREDAPPILALKNCRHPVAETLMDNFVPNDVYL--------NCGPHESKRT- 1338
Query: 197 LLLTGPNMGGKSTVMRQLGLITILAQM 223
LL+TGPNMGGKST++RQ L ++AQ+
Sbjct: 1339 LLITGPNMGGKSTLLRQAALCVVMAQV 1365
>gi|169827225|ref|YP_001697383.1| DNA mismatch repair protein [Lysinibacillus sphaericus C3-41]
gi|226723063|sp|B1HRG8.1|MUTS_LYSSC RecName: Full=DNA mismatch repair protein MutS
gi|168991713|gb|ACA39253.1| DNA mismatch repair protein [Lysinibacillus sphaericus C3-41]
Length = 856
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 26/77 (33%), Positives = 38/77 (49%), Gaps = 20/77 (25%)
Query: 147 LEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGG 206
+E HP + + Q Y+PN V+ + ++L+TGPNM G
Sbjct: 571 IEGRHPVVEKM-------LNKQMYVPNDCVL-------------EEQNNMMLITGPNMSG 610
Query: 207 KSTVMRQLGLITILAQM 223
KST MRQ+ LI ++AQM
Sbjct: 611 KSTYMRQVALIVVMAQM 627
>gi|85712118|ref|ZP_01043171.1| DNA mismatch repair protein [Idiomarina baltica OS145]
gi|85694108|gb|EAQ32053.1| DNA mismatch repair protein [Idiomarina baltica OS145]
Length = 853
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 34/95 (35%), Positives = 43/95 (45%), Gaps = 28/95 (29%)
Query: 136 QQGVCVPTFL---GL----EEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGG 188
+Q C P + GL + HP I L D+ +IPN +
Sbjct: 566 EQNYCRPALVEQSGLLKLSQARHPVIERLS--------DEPFIPNDLAM----------- 606
Query: 189 EGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
K +L++TGPNMGGKST MRQ LI ILA M
Sbjct: 607 --TDKRRLLMITGPNMGGKSTYMRQAALIVILAHM 639
>gi|313574703|emb|CBX26204.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
gi|313574713|emb|CBX26209.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
gi|313574715|emb|CBX26210.1| methyl-directed mismatch repair protein [Agrobacterium tumefaciens]
Length = 439
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/34 (64%), Positives = 26/34 (76%)
Query: 190 GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G + + LLTGPNMGGKST +RQ LITILAQ+
Sbjct: 302 GGKNGAIWLLTGPNMGGKSTFLRQNALITILAQI 335
>gi|221484273|gb|EEE22569.1| DNA mismatch repair protein, putative [Toxoplasma gondii GT1]
Length = 1676
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 33/87 (37%), Positives = 48/87 (55%), Gaps = 11/87 (12%)
Query: 139 VCVPTFLGLEEPHPYISALESL-YPCA-TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTV 196
+C PT + E P I AL++ +P A T ++PN + + G K T
Sbjct: 1357 MCRPTIVEAREDAPPILALKNCRHPVAETLMDNFVPNDVYL--------NCGPHESKRT- 1407
Query: 197 LLLTGPNMGGKSTVMRQLGLITILAQM 223
LL+TGPNMGGKST++RQ L ++AQ+
Sbjct: 1408 LLITGPNMGGKSTLLRQAALCVVMAQV 1434
>gi|432848490|ref|XP_004066371.1| PREDICTED: multivesicular body subunit 12A-like [Oryzias latipes]
Length = 284
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 33/101 (32%), Positives = 49/101 (48%), Gaps = 12/101 (11%)
Query: 14 KPITAIAVIEDIQKCPSGYTVISKTVDQDTDADMWRESAFFLRKTRYLCVSKTESLFQID 73
+P+TA+A + CP +T+I+ T D A+ R F ++ YLC SK
Sbjct: 10 RPVTAVAWTSNSSTCPKDFTLINITED-GVAANFTR---FGIKSGYYLCYSKD---LAGG 62
Query: 74 YIVENICIINEKETPPDGFCLIARTLDSDQG-----QICER 109
+V +I II +KE P G+C I LDS ++C R
Sbjct: 63 VVVTDIQIITDKEAIPHGYCYIPEHLDSKAAVSKRKRVCVR 103
>gi|365905365|ref|ZP_09443124.1| DNA mismatch repair protein MutS [Lactobacillus versmoldensis KCTC
3814]
Length = 875
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/58 (48%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G+ +YIPN DV E + VLL+TGPNM GKST MRQL L I+AQ+
Sbjct: 583 GNNSYIPN---------DVTFDSETD----VLLITGPNMSGKSTYMRQLALTVIMAQI 627
>gi|418158429|ref|ZP_12795140.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA16833]
gi|353820505|gb|EHE00689.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA16833]
Length = 717
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPN+ + ED ++ L+TGPNM GKST MRQL + ++AQ+
Sbjct: 453 GAQTYIPNTIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAVMAQL 497
>gi|309807428|ref|ZP_07701391.1| DNA mismatch repair protein MutS [Lactobacillus iners LactinV
01V1-a]
gi|308169350|gb|EFO71405.1| DNA mismatch repair protein MutS [Lactobacillus iners LactinV
01V1-a]
Length = 854
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + + S D+ YIPN DV+ + N + L+TGPNM GKST
Sbjct: 577 HPVVEKVMS-------DEEYIPN---------DVKMDEQTN----IFLITGPNMSGKSTY 616
Query: 211 MRQLGLITILAQM 223
MRQL LI I+AQ+
Sbjct: 617 MRQLALIIIMAQI 629
>gi|218674359|ref|ZP_03524028.1| DNA mismatch repair protein [Rhizobium etli GR56]
Length = 529
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/35 (62%), Positives = 26/35 (74%)
Query: 189 EGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+G + + LLTGPNMGGKST +RQ LI ILAQM
Sbjct: 271 DGAKDGAIWLLTGPNMGGKSTFLRQNALIAILAQM 305
>gi|389584278|dbj|GAB67011.1| DNA repair protein [Plasmodium cynomolgi strain B]
Length = 1282
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 11/73 (15%)
Query: 152 PYISALESLYPC-ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
P++ +++P AT +I N+ +G CK++ +S LLLTGPNMGGKST+
Sbjct: 1016 PFLILENNIHPVVATLMPNFISNNIYMG-CKQENQS---------TLLLTGPNMGGKSTL 1065
Query: 211 MRQLGLITILAQM 223
+RQ + ILAQ+
Sbjct: 1066 LRQTAISVILAQI 1078
>gi|325911928|ref|ZP_08174331.1| DNA mismatch repair protein MutS [Lactobacillus iners UPII 143-D]
gi|325476230|gb|EGC79393.1| DNA mismatch repair protein MutS [Lactobacillus iners UPII 143-D]
Length = 854
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + + S D+ YIPN DV+ + N + L+TGPNM GKST
Sbjct: 577 HPVVEKVMS-------DEEYIPN---------DVKMDEQTN----IFLITGPNMSGKSTY 616
Query: 211 MRQLGLITILAQM 223
MRQL LI I+AQ+
Sbjct: 617 MRQLALIIIMAQI 629
>gi|95929133|ref|ZP_01311877.1| DNA mismatch repair protein MutS [Desulfuromonas acetoxidans DSM
684]
gi|95134631|gb|EAT16286.1| DNA mismatch repair protein MutS [Desulfuromonas acetoxidans DSM
684]
Length = 869
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 36/102 (35%), Positives = 57/102 (55%), Gaps = 24/102 (23%)
Query: 123 TIFSQRNILKDMYQQGVCVPTFLGLEE-PHPYISALESLYPCATGDQTYIPNSTVIGRCK 181
+ +RN ++ + QG T L +EE HP I ++ G++ +IPN
Sbjct: 563 AVAHERNYVQPVMDQG----TALTIEEGRHPVIESMN------LGER-FIPN-------- 603
Query: 182 EDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
DV+ E ++ +L++TGPNM GKST MRQ+ LIT++AQ+
Sbjct: 604 -DVQLDTETDQ---LLIITGPNMAGKSTFMRQVALITLMAQV 641
>gi|348587534|ref|XP_003479522.1| PREDICTED: DNA mismatch repair protein Msh3-like [Cavia porcellus]
Length = 1122
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 52/106 (49%), Gaps = 27/106 (25%)
Query: 124 IFSQRNILKDMYQQGVCVPTF------LGLEEPHPYISALESLYPCATGDQTYIPNSTVI 177
IFS + K Q C PT L HP I L DQ Y+PNST +
Sbjct: 806 IFSLAKVAK---QGNYCRPTLKEERKILIKNGRHPVIDVL-----LGEHDQ-YVPNSTSL 856
Query: 178 GRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
ED E V+++TGPNMGGKS+ ++Q+ LIT++AQ+
Sbjct: 857 S---EDSER---------VMIITGPNMGGKSSYIKQVALITLMAQV 890
>gi|367020408|ref|XP_003659489.1| hypothetical protein MYCTH_99556 [Myceliophthora thermophila ATCC
42464]
gi|347006756|gb|AEO54244.1| hypothetical protein MYCTH_99556 [Myceliophthora thermophila ATCC
42464]
Length = 852
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 27/57 (47%), Positives = 34/57 (59%), Gaps = 3/57 (5%)
Query: 169 TYIPN-STVIGRCKED--VESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
+YIPN +TV G C +GG P++L+LTGPN GKS MRQ+ LI LA
Sbjct: 550 SYIPNDTTVAGGCGTGGIAINGGRMELAPSMLILTGPNNSGKSVYMRQVALIVYLAH 606
>gi|325913769|ref|ZP_08176130.1| DNA mismatch repair protein MutS [Lactobacillus iners UPII 60-B]
gi|325476969|gb|EGC80120.1| DNA mismatch repair protein MutS [Lactobacillus iners UPII 60-B]
Length = 854
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + + S D+ YIPN DV+ + N + L+TGPNM GKST
Sbjct: 577 HPVVEKVMS-------DEEYIPN---------DVKMDEQTN----IFLITGPNMSGKSTY 616
Query: 211 MRQLGLITILAQM 223
MRQL LI I+AQ+
Sbjct: 617 MRQLALIIIMAQI 629
>gi|309803573|ref|ZP_07697665.1| DNA mismatch repair protein MutS [Lactobacillus iners LactinV
11V1-d]
gi|308164321|gb|EFO66576.1| DNA mismatch repair protein MutS [Lactobacillus iners LactinV
11V1-d]
Length = 854
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/73 (41%), Positives = 39/73 (53%), Gaps = 20/73 (27%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP + + S D+ YIPN DV+ + N + L+TGPNM GKST
Sbjct: 577 HPVVEKVMS-------DEEYIPN---------DVKMDEQTN----IFLITGPNMSGKSTY 616
Query: 211 MRQLGLITILAQM 223
MRQL LI I+AQ+
Sbjct: 617 MRQLALIIIMAQI 629
>gi|373857376|ref|ZP_09600118.1| DNA mismatch repair protein MutS [Bacillus sp. 1NLA3E]
gi|372453026|gb|EHP26495.1| DNA mismatch repair protein MutS [Bacillus sp. 1NLA3E]
Length = 881
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/56 (44%), Positives = 32/56 (57%), Gaps = 13/56 (23%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Q Y+PN + R +E +LL+TGPNM GKST MRQ+ L ILAQ+
Sbjct: 587 QEYVPNDCHMDRDRE-------------ILLITGPNMSGKSTYMRQVALTAILAQI 629
>gi|302874906|ref|YP_003843539.1| DNA mismatch repair protein MutS [Clostridium cellulovorans 743B]
gi|307690474|ref|ZP_07632920.1| DNA mismatch repair protein MutS [Clostridium cellulovorans 743B]
gi|302577763|gb|ADL51775.1| DNA mismatch repair protein MutS [Clostridium cellulovorans 743B]
Length = 901
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/76 (44%), Positives = 44/76 (57%), Gaps = 19/76 (25%)
Query: 148 EEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGK 207
E HP + E L P TG+ +I NS + R E N+ +L++TGPNMGGK
Sbjct: 580 EGRHPVV---EKLLP--TGN--FISNSISLDR---------EENQ---LLIITGPNMGGK 620
Query: 208 STVMRQLGLITILAQM 223
ST MRQ LITI+AQ+
Sbjct: 621 STYMRQCALITIMAQI 636
>gi|221057249|ref|XP_002259762.1| DNA repair protein [Plasmodium knowlesi strain H]
gi|193809834|emb|CAQ40538.1| DNA repair protein, putative [Plasmodium knowlesi strain H]
Length = 1303
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 29/73 (39%), Positives = 44/73 (60%), Gaps = 11/73 (15%)
Query: 152 PYISALESLYPC-ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
P++ +++P AT +I N+ +G CK++ +S LLLTGPNMGGKST+
Sbjct: 1037 PFLILENNIHPVVATLMPNFISNNIYMG-CKQENQS---------TLLLTGPNMGGKSTL 1086
Query: 211 MRQLGLITILAQM 223
+RQ + ILAQ+
Sbjct: 1087 LRQTAISVILAQI 1099
>gi|17988084|ref|NP_540718.1| DNA mismatch repair protein MutS [Brucella melitensis bv. 1 str.
16M]
gi|225626686|ref|ZP_03784725.1| DNA mismatch repair protein MutS [Brucella ceti str. Cudo]
gi|17983835|gb|AAL52982.1| DNA mismatch repair protein muts [Brucella melitensis bv. 1 str.
16M]
gi|225618343|gb|EEH15386.1| DNA mismatch repair protein MutS [Brucella ceti str. Cudo]
Length = 915
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 24/37 (64%), Positives = 27/37 (72%), Gaps = 4/37 (10%)
Query: 187 GGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
GG+G + LLTGPNMGGKST +RQ LI ILAQM
Sbjct: 653 GGDG----AIWLLTGPNMGGKSTFLRQNALIAILAQM 685
>gi|62289123|ref|YP_220916.1| DNA mismatch repair protein MutS [Brucella abortus bv. 1 str.
9-941]
gi|82699062|ref|YP_413636.1| DNA mismatch repair protein MutS [Brucella melitensis biovar
Abortus 2308]
gi|189023400|ref|YP_001934168.1| DNA mismatch repair protein MutS [Brucella abortus S19]
gi|260546421|ref|ZP_05822161.1| DNA mismatch repair protein mutS [Brucella abortus NCTC 8038]
gi|260756003|ref|ZP_05868351.1| DNA mismatch repair protein mutS [Brucella abortus bv. 6 str. 870]
gi|260759227|ref|ZP_05871575.1| DNA mismatch repair protein mutS [Brucella abortus bv. 4 str. 292]
gi|260760949|ref|ZP_05873292.1| DNA mismatch repair protein mutS [Brucella abortus bv. 2 str.
86/8/59]
gi|260885023|ref|ZP_05896637.1| DNA mismatch repair protein mutS [Brucella abortus bv. 9 str. C68]
gi|261215279|ref|ZP_05929560.1| DNA mismatch repair protein mutS [Brucella abortus bv. 3 str.
Tulya]
gi|297247539|ref|ZP_06931257.1| DNA mismatch repair protein MutS [Brucella abortus bv. 5 str.
B3196]
gi|376271942|ref|YP_005150520.1| DNA mismatch repair protein MutS [Brucella abortus A13334]
gi|423167711|ref|ZP_17154414.1| DNA mismatch repair protein mutS [Brucella abortus bv. 1 str.
NI435a]
gi|423169913|ref|ZP_17156588.1| DNA mismatch repair protein mutS [Brucella abortus bv. 1 str.
NI474]
gi|423175096|ref|ZP_17161765.1| DNA mismatch repair protein mutS [Brucella abortus bv. 1 str.
NI486]
gi|423178053|ref|ZP_17164698.1| DNA mismatch repair protein mutS [Brucella abortus bv. 1 str.
NI488]
gi|423179346|ref|ZP_17165987.1| DNA mismatch repair protein mutS [Brucella abortus bv. 1 str.
NI010]
gi|423182476|ref|ZP_17169113.1| DNA mismatch repair protein mutS [Brucella abortus bv. 1 str.
NI016]
gi|423186581|ref|ZP_17173195.1| DNA mismatch repair protein mutS [Brucella abortus bv. 1 str.
NI021]
gi|423190981|ref|ZP_17177589.1| DNA mismatch repair protein mutS [Brucella abortus bv. 1 str.
NI259]
gi|75505362|sp|Q57FM9.1|MUTS_BRUAB RecName: Full=DNA mismatch repair protein MutS
gi|123546779|sp|Q2YNZ0.1|MUTS_BRUA2 RecName: Full=DNA mismatch repair protein MutS
gi|62195255|gb|AAX73555.1| MutS, DNA mismatch repair protein [Brucella abortus bv. 1 str.
9-941]
gi|82615163|emb|CAJ10102.1| DNA mismatch repair protein MutS, C-terminal:Aldo/keto
reductase:ATP/GTP-binding site motif A (P-loop):MutS 1
protein:DNA mis [Brucella melitensis biovar Abortus
2308]
gi|189018972|gb|ACD71694.1| DNA mismatch repair protein [Brucella abortus S19]
gi|260096528|gb|EEW80404.1| DNA mismatch repair protein mutS [Brucella abortus NCTC 8038]
gi|260669545|gb|EEX56485.1| DNA mismatch repair protein mutS [Brucella abortus bv. 4 str. 292]
gi|260671381|gb|EEX58202.1| DNA mismatch repair protein mutS [Brucella abortus bv. 2 str.
86/8/59]
gi|260676111|gb|EEX62932.1| DNA mismatch repair protein mutS [Brucella abortus bv. 6 str. 870]
gi|260874551|gb|EEX81620.1| DNA mismatch repair protein mutS [Brucella abortus bv. 9 str. C68]
gi|260916886|gb|EEX83747.1| DNA mismatch repair protein mutS [Brucella abortus bv. 3 str.
Tulya]
gi|297174708|gb|EFH34055.1| DNA mismatch repair protein MutS [Brucella abortus bv. 5 str.
B3196]
gi|363399548|gb|AEW16518.1| DNA mismatch repair protein MutS [Brucella abortus A13334]
gi|374537327|gb|EHR08840.1| DNA mismatch repair protein mutS [Brucella abortus bv. 1 str.
NI486]
gi|374541145|gb|EHR12644.1| DNA mismatch repair protein mutS [Brucella abortus bv. 1 str.
NI435a]
gi|374542149|gb|EHR13638.1| DNA mismatch repair protein mutS [Brucella abortus bv. 1 str.
NI474]
gi|374547537|gb|EHR18991.1| DNA mismatch repair protein mutS [Brucella abortus bv. 1 str.
NI488]
gi|374550865|gb|EHR22300.1| DNA mismatch repair protein mutS [Brucella abortus bv. 1 str.
NI010]
gi|374551322|gb|EHR22756.1| DNA mismatch repair protein mutS [Brucella abortus bv. 1 str.
NI016]
gi|374553671|gb|EHR25085.1| DNA mismatch repair protein mutS [Brucella abortus bv. 1 str.
NI259]
gi|374558260|gb|EHR29654.1| DNA mismatch repair protein mutS [Brucella abortus bv. 1 str.
NI021]
Length = 910
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 24/37 (64%), Positives = 27/37 (72%), Gaps = 4/37 (10%)
Query: 187 GGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
GG+G + LLTGPNMGGKST +RQ LI ILAQM
Sbjct: 648 GGDG----AIWLLTGPNMGGKSTFLRQNALIAILAQM 680
>gi|260563219|ref|ZP_05833705.1| DNA mismatch repair protein mutS [Brucella melitensis bv. 1 str.
16M]
gi|261218148|ref|ZP_05932429.1| DNA mismatch repair protein mutS [Brucella ceti M13/05/1]
gi|261221374|ref|ZP_05935655.1| DNA mismatch repair protein mutS [Brucella ceti B1/94]
gi|261314638|ref|ZP_05953835.1| DNA mismatch repair protein mutS [Brucella pinnipedialis
M163/99/10]
gi|261321004|ref|ZP_05960201.1| DNA mismatch repair protein mutS [Brucella ceti M644/93/1]
gi|261324261|ref|ZP_05963458.1| DNA mismatch repair protein mutS [Brucella neotomae 5K33]
gi|261759261|ref|ZP_06002970.1| DNA mismatch repair protein mutS [Brucella sp. F5/99]
gi|265992349|ref|ZP_06104906.1| DNA mismatch repair protein mutS [Brucella melitensis bv. 1 str.
Rev.1]
gi|265994092|ref|ZP_06106649.1| DNA mismatch repair protein mutS [Brucella melitensis bv. 3 str.
Ether]
gi|265997335|ref|ZP_06109892.1| DNA mismatch repair protein mutS [Brucella ceti M490/95/1]
gi|44888234|sp|Q8YES6.2|MUTS_BRUME RecName: Full=DNA mismatch repair protein MutS
gi|260153235|gb|EEW88327.1| DNA mismatch repair protein mutS [Brucella melitensis bv. 1 str.
16M]
gi|260919958|gb|EEX86611.1| DNA mismatch repair protein mutS [Brucella ceti B1/94]
gi|260923237|gb|EEX89805.1| DNA mismatch repair protein mutS [Brucella ceti M13/05/1]
gi|261293694|gb|EEX97190.1| DNA mismatch repair protein mutS [Brucella ceti M644/93/1]
gi|261300241|gb|EEY03738.1| DNA mismatch repair protein mutS [Brucella neotomae 5K33]
gi|261303664|gb|EEY07161.1| DNA mismatch repair protein mutS [Brucella pinnipedialis
M163/99/10]
gi|261739245|gb|EEY27241.1| DNA mismatch repair protein mutS [Brucella sp. F5/99]
gi|262551803|gb|EEZ07793.1| DNA mismatch repair protein mutS [Brucella ceti M490/95/1]
gi|262765073|gb|EEZ10994.1| DNA mismatch repair protein mutS [Brucella melitensis bv. 3 str.
Ether]
gi|263003415|gb|EEZ15708.1| DNA mismatch repair protein mutS [Brucella melitensis bv. 1 str.
Rev.1]
Length = 910
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 24/37 (64%), Positives = 27/37 (72%), Gaps = 4/37 (10%)
Query: 187 GGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
GG+G + LLTGPNMGGKST +RQ LI ILAQM
Sbjct: 648 GGDG----AIWLLTGPNMGGKSTFLRQNALIAILAQM 680
>gi|363750187|ref|XP_003645311.1| hypothetical protein Ecym_2796 [Eremothecium cymbalariae
DBVPG#7215]
gi|356888944|gb|AET38494.1| Hypothetical protein Ecym_2796 [Eremothecium cymbalariae
DBVPG#7215]
Length = 954
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/69 (36%), Positives = 42/69 (60%), Gaps = 14/69 (20%)
Query: 157 LESLYPCAT--GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQL 214
+ES +P D T+I N+ ++ R ++ L++TGPNMGGKST +RQ+
Sbjct: 647 IESRHPLVEVQDDVTFIANNVILER------------QESEFLIITGPNMGGKSTYIRQV 694
Query: 215 GLITILAQM 223
G+IT+++Q+
Sbjct: 695 GVITLMSQI 703
>gi|294851546|ref|ZP_06792219.1| DNA mismatch repair protein MutS [Brucella sp. NVSL 07-0026]
gi|294820135|gb|EFG37134.1| DNA mismatch repair protein MutS [Brucella sp. NVSL 07-0026]
Length = 910
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 24/37 (64%), Positives = 27/37 (72%), Gaps = 4/37 (10%)
Query: 187 GGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
GG+G + LLTGPNMGGKST +RQ LI ILAQM
Sbjct: 648 GGDG----AIWLLTGPNMGGKSTFLRQNALIAILAQM 680
>gi|256368611|ref|YP_003106117.1| DNA mismatch repair protein MutS [Brucella microti CCM 4915]
gi|255998769|gb|ACU47168.1| DNA mismatch repair protein [Brucella microti CCM 4915]
Length = 910
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 24/37 (64%), Positives = 27/37 (72%), Gaps = 4/37 (10%)
Query: 187 GGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
GG+G + LLTGPNMGGKST +RQ LI ILAQM
Sbjct: 648 GGDG----AIWLLTGPNMGGKSTFLRQNALIAILAQM 680
>gi|261316805|ref|ZP_05956002.1| DNA mismatch repair protein mutS [Brucella pinnipedialis B2/94]
gi|265987875|ref|ZP_06100432.1| DNA mismatch repair protein mutS [Brucella pinnipedialis M292/94/1]
gi|340789770|ref|YP_004755234.1| DNA mismatch repair protein MutS [Brucella pinnipedialis B2/94]
gi|261296028|gb|EEX99524.1| DNA mismatch repair protein mutS [Brucella pinnipedialis B2/94]
gi|264660072|gb|EEZ30333.1| DNA mismatch repair protein mutS [Brucella pinnipedialis M292/94/1]
gi|340558228|gb|AEK53466.1| DNA mismatch repair protein MutS [Brucella pinnipedialis B2/94]
Length = 910
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 24/37 (64%), Positives = 27/37 (72%), Gaps = 4/37 (10%)
Query: 187 GGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
GG+G + LLTGPNMGGKST +RQ LI ILAQM
Sbjct: 648 GGDG----AIWLLTGPNMGGKSTFLRQNALIAILAQM 680
>gi|261751475|ref|ZP_05995184.1| DNA mismatch repair protein mutS [Brucella suis bv. 5 str. 513]
gi|261741228|gb|EEY29154.1| DNA mismatch repair protein mutS [Brucella suis bv. 5 str. 513]
Length = 910
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 24/37 (64%), Positives = 27/37 (72%), Gaps = 4/37 (10%)
Query: 187 GGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
GG+G + LLTGPNMGGKST +RQ LI ILAQM
Sbjct: 648 GGDG----AIWLLTGPNMGGKSTFLRQNALIAILAQM 680
>gi|237814617|ref|ZP_04593615.1| DNA mismatch repair protein MutS [Brucella abortus str. 2308 A]
gi|237789454|gb|EEP63664.1| DNA mismatch repair protein MutS [Brucella abortus str. 2308 A]
Length = 915
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 24/37 (64%), Positives = 27/37 (72%), Gaps = 4/37 (10%)
Query: 187 GGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
GG+G + LLTGPNMGGKST +RQ LI ILAQM
Sbjct: 653 GGDG----AIWLLTGPNMGGKSTFLRQNALIAILAQM 685
>gi|225851681|ref|YP_002731914.1| DNA mismatch repair protein MutS [Brucella melitensis ATCC 23457]
gi|256264808|ref|ZP_05467340.1| DNA mismatch repair protein mutS [Brucella melitensis bv. 2 str.
63/9]
gi|384210518|ref|YP_005599600.1| DNA mismatch repair protein MutS [Brucella melitensis M5-90]
gi|384407621|ref|YP_005596242.1| DNA mismatch repair protein MutS [Brucella melitensis M28]
gi|384444236|ref|YP_005602955.1| DNA mismatch repair protein MutS [Brucella melitensis NI]
gi|225640046|gb|ACN99959.1| DNA mismatch repair protein MutS [Brucella melitensis ATCC 23457]
gi|263095218|gb|EEZ18887.1| DNA mismatch repair protein mutS [Brucella melitensis bv. 2 str.
63/9]
gi|326408168|gb|ADZ65233.1| DNA mismatch repair protein MutS [Brucella melitensis M28]
gi|326537881|gb|ADZ86096.1| DNA mismatch repair protein MutS [Brucella melitensis M5-90]
gi|349742232|gb|AEQ07775.1| DNA mismatch repair protein MutS [Brucella melitensis NI]
Length = 910
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 24/37 (64%), Positives = 27/37 (72%), Gaps = 4/37 (10%)
Query: 187 GGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
GG+G + LLTGPNMGGKST +RQ LI ILAQM
Sbjct: 648 GGDG----AIWLLTGPNMGGKSTFLRQNALIAILAQM 680
>gi|163842417|ref|YP_001626821.1| DNA mismatch repair protein MutS [Brucella suis ATCC 23445]
gi|189030706|sp|B0CIQ5.1|MUTS_BRUSI RecName: Full=DNA mismatch repair protein MutS
gi|163673140|gb|ABY37251.1| DNA mismatch repair protein MutS [Brucella suis ATCC 23445]
Length = 910
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 24/37 (64%), Positives = 27/37 (72%), Gaps = 4/37 (10%)
Query: 187 GGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
GG+G + LLTGPNMGGKST +RQ LI ILAQM
Sbjct: 648 GGDG----AIWLLTGPNMGGKSTFLRQNALIAILAQM 680
>gi|148559861|ref|YP_001258180.1| DNA mismatch repair protein MutS [Brucella ovis ATCC 25840]
gi|189030705|sp|A5VN83.1|MUTS_BRUO2 RecName: Full=DNA mismatch repair protein MutS
gi|148371118|gb|ABQ61097.1| DNA mismatch repair protein MutS [Brucella ovis ATCC 25840]
Length = 898
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 24/37 (64%), Positives = 27/37 (72%), Gaps = 4/37 (10%)
Query: 187 GGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
GG+G + LLTGPNMGGKST +RQ LI ILAQM
Sbjct: 636 GGDG----AIWLLTGPNMGGKSTFLRQNALIAILAQM 668
>gi|23501058|ref|NP_697185.1| DNA mismatch repair protein MutS [Brucella suis 1330]
gi|161618135|ref|YP_001592022.1| DNA mismatch repair protein MutS [Brucella canis ATCC 23365]
gi|260567215|ref|ZP_05837685.1| DNA mismatch repair protein mutS [Brucella suis bv. 4 str. 40]
gi|261756037|ref|ZP_05999746.1| DNA mismatch repair protein mutS [Brucella suis bv. 3 str. 686]
gi|376275079|ref|YP_005115518.1| DNA mismatch repair protein mutS [Brucella canis HSK A52141]
gi|376279846|ref|YP_005153852.1| DNA mismatch repair protein MutS [Brucella suis VBI22]
gi|384223840|ref|YP_005615004.1| DNA mismatch repair protein MutS [Brucella suis 1330]
gi|44888220|sp|Q8G310.1|MUTS_BRUSU RecName: Full=DNA mismatch repair protein MutS
gi|189030704|sp|A9M792.1|MUTS_BRUC2 RecName: Full=DNA mismatch repair protein MutS
gi|23346925|gb|AAN29100.1| DNA mismatch repair protein MutS [Brucella suis 1330]
gi|161334946|gb|ABX61251.1| DNA mismatch repair protein MutS [Brucella canis ATCC 23365]
gi|260156733|gb|EEW91813.1| DNA mismatch repair protein mutS [Brucella suis bv. 4 str. 40]
gi|261745790|gb|EEY33716.1| DNA mismatch repair protein mutS [Brucella suis bv. 3 str. 686]
gi|343382020|gb|AEM17512.1| DNA mismatch repair protein MutS [Brucella suis 1330]
gi|358257445|gb|AEU05180.1| DNA mismatch repair protein MutS [Brucella suis VBI22]
gi|363403646|gb|AEW13941.1| DNA mismatch repair protein mutS [Brucella canis HSK A52141]
Length = 910
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 24/37 (64%), Positives = 27/37 (72%), Gaps = 4/37 (10%)
Query: 187 GGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
GG+G + LLTGPNMGGKST +RQ LI ILAQM
Sbjct: 648 GGDG----AIWLLTGPNMGGKSTFLRQNALIAILAQM 680
>gi|253701106|ref|YP_003022295.1| DNA mismatch repair protein MutS [Geobacter sp. M21]
gi|259511168|sp|C6DZZ3.1|MUTS_GEOSM RecName: Full=DNA mismatch repair protein MutS
gi|251775956|gb|ACT18537.1| DNA mismatch repair protein MutS [Geobacter sp. M21]
Length = 869
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 26/76 (34%), Positives = 41/76 (53%), Gaps = 19/76 (25%)
Query: 148 EEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGK 207
E HP I + S + ++PN T++ N + ++++TGPNM GK
Sbjct: 587 EGRHPVIEDMHSA-------ERFVPNDTLLD------------NGENQLIIITGPNMAGK 627
Query: 208 STVMRQLGLITILAQM 223
ST MRQ+ LI+++AQM
Sbjct: 628 STFMRQVALISLMAQM 643
>gi|325983659|ref|YP_004296061.1| DNA mismatch repair protein MutS [Nitrosomonas sp. AL212]
gi|325533178|gb|ADZ27899.1| DNA mismatch repair protein MutS [Nitrosomonas sp. AL212]
Length = 865
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 30/76 (39%), Positives = 41/76 (53%), Gaps = 2/76 (2%)
Query: 147 LEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGG 206
L+ PY+S E + TG + S V DV+ G + +LL+TGPNMGG
Sbjct: 566 LDYTAPYLSN-EDIVSIDTGRHPVV-ESQVENFVANDVQLGTQQTGIQQMLLITGPNMGG 623
Query: 207 KSTVMRQLGLITILAQ 222
KST MRQ+ LI++L
Sbjct: 624 KSTYMRQIALISLLVH 639
>gi|434388178|ref|YP_007098789.1| DNA mismatch repair protein MutS [Chamaesiphon minutus PCC 6605]
gi|428019168|gb|AFY95262.1| DNA mismatch repair protein MutS [Chamaesiphon minutus PCC 6605]
Length = 867
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/87 (36%), Positives = 46/87 (52%), Gaps = 5/87 (5%)
Query: 137 QGVCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTV 196
QG C P + E H + A ++PNST +G+ E + + E P +
Sbjct: 611 QGYCRPQMVPSREIH-ITDGRHPVVEKALLAGFFVPNSTQLGQA-EHITATVE---HPDL 665
Query: 197 LLLTGPNMGGKSTVMRQLGLITILAQM 223
++LTGPN GKS +RQLGLI I+AQ+
Sbjct: 666 IILTGPNASGKSCYLRQLGLIQIMAQI 692
>gi|158338688|ref|YP_001519865.1| DNA mismatch repair protein MutS [Acaryochloris marina MBIC11017]
gi|189030431|sp|B0CF30.1|MUTS_ACAM1 RecName: Full=DNA mismatch repair protein MutS
gi|158308929|gb|ABW30546.1| DNA mismatch repair protein MutS [Acaryochloris marina MBIC11017]
Length = 883
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 32/93 (34%), Positives = 47/93 (50%), Gaps = 18/93 (19%)
Query: 137 QGVCVPTFLG------LEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEG 190
QG C PT L+ HP + +SL P ++PN+T +G E
Sbjct: 606 QGYCCPTMSDSREIQILDGRHPVVE--QSLPP-----GFFVPNATELGSA-----PSAEL 653
Query: 191 NRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
P +++LTGPN GKS +RQ+GLI ++AQ+
Sbjct: 654 TPHPDLVILTGPNASGKSCYLRQVGLIQLMAQI 686
>gi|12055983|emb|CAC21115.1| DNA mismatch repair protein [Streptococcus pyogenes]
Length = 135
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 57 GVQEYIPNSI-------------SFDQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 101
>gi|12056003|emb|CAC21125.1| DNA mismatch repair protein [Streptococcus pyogenes]
Length = 135
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 57 GVQEYIPNSISF-------------DQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 101
>gi|443898651|dbj|GAC75985.1| mismatch repair ATPase MSH2 [Pseudozyma antarctica T-34]
Length = 726
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 27/68 (39%), Positives = 39/68 (57%), Gaps = 14/68 (20%)
Query: 158 ESLYPC--ATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLG 215
E+ +PC D +IPN T E V E L++TGPNMGGKST +RQ+G
Sbjct: 414 EARHPCLEVMDDVNFIPNDT------EMVRGASE------FLVITGPNMGGKSTYIRQVG 461
Query: 216 LITILAQM 223
++ ++AQ+
Sbjct: 462 IMALMAQV 469
>gi|358391487|gb|EHK40891.1| hypothetical protein TRIATDRAFT_78319 [Trichoderma atroviride IMI
206040]
Length = 1099
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 33/92 (35%), Positives = 47/92 (51%), Gaps = 19/92 (20%)
Query: 136 QQGVCVPTFLGLEEPHPYISALESLYPCA--TGDQTYIPNSTVIGRCKEDVESGGEGNRK 193
Q G PTFL P IS + +P A T + +YIP +T +
Sbjct: 821 QPGYSKPTFLP-STSEPSISISQGRHPMAEQTLESSYIPFTTTLAH-------------- 865
Query: 194 PTVL--LLTGPNMGGKSTVMRQLGLITILAQM 223
P+ L L+TGPNMGGKS+ +R + LI +L+Q+
Sbjct: 866 PSTLAHLITGPNMGGKSSFVRAVALIVLLSQI 897
>gi|335997019|ref|ZP_08562936.1| DNA mismatch repair protein [Lactobacillus ruminis SPM0211]
gi|335352089|gb|EGM53580.1| DNA mismatch repair protein [Lactobacillus ruminis SPM0211]
Length = 875
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+Y+PN + ++ +LL+TGPNM GKST MRQL L I+AQ+
Sbjct: 587 GKQSYVPNDVSMPEGRD-------------ILLITGPNMSGKSTYMRQLALTAIMAQI 631
>gi|86356045|ref|YP_467937.1| DNA mismatch repair protein MutS [Rhizobium etli CFN 42]
gi|123513236|sp|Q2KD76.1|MUTS_RHIEC RecName: Full=DNA mismatch repair protein MutS
gi|86280147|gb|ABC89210.1| DNA mismatch repair protein [Rhizobium etli CFN 42]
Length = 908
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 21/34 (61%), Positives = 26/34 (76%)
Query: 190 GNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G++ + LLTGPNMGGKST +RQ LI I+AQM
Sbjct: 651 GDKDGAIWLLTGPNMGGKSTFLRQNALIAIMAQM 684
>gi|347525864|ref|YP_004832612.1| DNA mismatch repair protein MutS [Lactobacillus ruminis ATCC 27782]
gi|345284823|gb|AEN78676.1| DNA mismatch repair protein MutS [Lactobacillus ruminis ATCC 27782]
Length = 875
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+Y+PN + ++ +LL+TGPNM GKST MRQL L I+AQ+
Sbjct: 587 GKQSYVPNDVSMPEGRD-------------ILLITGPNMSGKSTYMRQLALTVIMAQI 631
>gi|323341470|ref|ZP_08081711.1| DNA mismatch repair protein HexA [Lactobacillus ruminis ATCC 25644]
gi|417974515|ref|ZP_12615331.1| DNA mismatch repair protein MutS [Lactobacillus ruminis ATCC 25644]
gi|323091081|gb|EFZ33712.1| DNA mismatch repair protein HexA [Lactobacillus ruminis ATCC 25644]
gi|346329117|gb|EGX97420.1| DNA mismatch repair protein MutS [Lactobacillus ruminis ATCC 25644]
Length = 875
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 24/58 (41%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+Y+PN + ++ +LL+TGPNM GKST MRQL L I+AQ+
Sbjct: 587 GKQSYVPNDVSMPEGRD-------------ILLITGPNMSGKSTYMRQLALTAIMAQI 631
>gi|46404941|gb|AAS93341.1| DNA mismatch repair protein [Streptococcus pyogenes]
Length = 135
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 57 GVQEYIPNSI-------------SFDQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 101
>gi|12055987|emb|CAC21117.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|12055989|emb|CAC21118.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|12056005|emb|CAC21126.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|12056015|emb|CAC21131.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|33521563|gb|AAQ20069.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|33521567|gb|AAQ20071.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|46404939|gb|AAS93340.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|46404947|gb|AAS93344.1| DNA mismatch repair protein [Streptococcus pyogenes]
Length = 135
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 57 GVQEYIPNSI-------------SFDQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 101
>gi|12056013|emb|CAC21130.1| DNA mismatch repair protein [Streptococcus pyogenes]
Length = 135
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 57 GVQEYIPNSI-------------SFDQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 101
>gi|377557385|ref|ZP_09787033.1| DNA mismatch repair protein mutS [Lactobacillus gastricus PS3]
gi|376165652|gb|EHS84599.1| DNA mismatch repair protein mutS [Lactobacillus gastricus PS3]
Length = 862
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN ++ D E+ +LL+TGPNM GKST MRQL LI ++ Q+
Sbjct: 581 GHQAYVPNDVLM-----DPETA--------ILLITGPNMSGKSTYMRQLALIAVMTQV 625
>gi|12055991|emb|CAC21119.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|12055993|emb|CAC21120.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|12055995|emb|CAC21121.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|12055997|emb|CAC21122.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|12056001|emb|CAC21124.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|12056011|emb|CAC21129.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|12056017|emb|CAC21132.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|12056019|emb|CAC21133.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|33521559|gb|AAQ20067.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|33521561|gb|AAQ20068.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|33521565|gb|AAQ20070.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|46404937|gb|AAS93339.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|46404945|gb|AAS93343.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|115335308|gb|ABI94172.1| DNA mismatch repair protein, partial [Streptococcus pyogenes]
gi|115335310|gb|ABI94173.1| DNA mismatch repair protein, partial [Streptococcus pyogenes]
gi|115335312|gb|ABI94174.1| DNA mismatch repair protein, partial [Streptococcus pyogenes]
gi|115335314|gb|ABI94175.1| DNA mismatch repair protein, partial [Streptococcus pyogenes]
Length = 135
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 57 GVQEYIPNSISF-------------DQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 101
>gi|12056021|emb|CAC21134.1| DNA mismatch repair protein [Streptococcus pyogenes]
Length = 135
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 57 GVQEYIPNSISF-------------DQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 101
>gi|314933475|ref|ZP_07840840.1| DNA mismatch repair protein MutS [Staphylococcus caprae C87]
gi|313653625|gb|EFS17382.1| DNA mismatch repair protein MutS [Staphylococcus caprae C87]
Length = 873
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 30/90 (33%), Positives = 49/90 (54%), Gaps = 12/90 (13%)
Query: 140 CVPTFLGLEEPHPYISALESLYPCATGDQT-YIPNST--VIGRCKED---VESGGEGNRK 193
C+ +F + + + Y+ P + D+T ++ NS V+ R + V + N
Sbjct: 544 CLQSFAEIAQKYNYVR------PSFSDDKTLHLENSRHPVVERVMDHNDYVPNDCSLNND 597
Query: 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ L+TGPNM GKST MRQ+ +I+I+AQM
Sbjct: 598 TFIYLITGPNMSGKSTYMRQVAIISIMAQM 627
>gi|221222520|sp|A4G717.3|MUTS_HERAR RecName: Full=DNA mismatch repair protein MutS
gi|193222369|emb|CAL62304.2| DNA mismatch repair protein MutS [Herminiimonas arsenicoxydans]
Length = 893
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 191 NRKPTVLLLTGPNMGGKSTVMRQLGLITILA 221
N + +LL+TGPNMGGKST MRQ+ LIT+LA
Sbjct: 631 NNESRLLLITGPNMGGKSTYMRQVALITLLA 661
>gi|134095352|ref|YP_001100427.1| DNA mismatch repair protein MutS [Herminiimonas arsenicoxydans]
Length = 870
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 21/31 (67%), Positives = 26/31 (83%)
Query: 191 NRKPTVLLLTGPNMGGKSTVMRQLGLITILA 221
N + +LL+TGPNMGGKST MRQ+ LIT+LA
Sbjct: 608 NNESRLLLITGPNMGGKSTYMRQVALITLLA 638
>gi|12055985|emb|CAC21116.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|46404949|gb|AAS93345.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|115335316|gb|ABI94176.1| DNA mismatch repair protein, partial [Streptococcus pyogenes]
Length = 135
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 57 GVQEYIPNSISF-------------DQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 101
>gi|78189282|ref|YP_379620.1| DNA mismatch repair protein MutS [Chlorobium chlorochromatii CaD3]
gi|90109843|sp|Q3AQZ8.1|MUTS_CHLCH RecName: Full=DNA mismatch repair protein MutS
gi|78171481|gb|ABB28577.1| DNA mismatch repair protein MutS [Chlorobium chlorochromatii CaD3]
Length = 873
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 25/57 (43%), Positives = 35/57 (61%), Gaps = 13/57 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
+++YIPN C D K T+L++TGPNM GKS+ +RQ+GLI +LAQ
Sbjct: 606 AEESYIPND-----CHFD--------DKQTMLIITGPNMAGKSSYLRQIGLIVLLAQ 649
>gi|47226649|emb|CAG07808.1| unnamed protein product [Tetraodon nigroviridis]
Length = 633
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 25/54 (46%), Positives = 34/54 (62%), Gaps = 12/54 (22%)
Query: 170 YIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
Y+PN T E GEG R +++TGPNMGGKS+ +RQ+ LI ++AQM
Sbjct: 408 YVPNVT---------ELQGEGKR---TMIITGPNMGGKSSYIRQVALICVMAQM 449
>gi|12055999|emb|CAC21123.1| DNA mismatch repair protein [Streptococcus pyogenes]
Length = 135
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 57 GVQEYIPNSISF-------------DQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 101
>gi|365919700|ref|ZP_09444072.1| DNA mismatch repair protein MutS [Cardiobacterium valvarum F0432]
gi|364578932|gb|EHM56114.1| DNA mismatch repair protein MutS [Cardiobacterium valvarum F0432]
Length = 866
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 29/75 (38%), Positives = 41/75 (54%), Gaps = 15/75 (20%)
Query: 149 EPHPYISALESLYPCAT--GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGG 206
+P P ++ + +P + +I N D+E G ++ VL++TGPNMGG
Sbjct: 573 DPDPILTIEQGRHPVVEQHNSEPFIAN---------DLELG----KRRQVLIITGPNMGG 619
Query: 207 KSTVMRQLGLITILA 221
KST MRQ LITILA
Sbjct: 620 KSTYMRQAALITILA 634
>gi|148657805|ref|YP_001278010.1| DNA mismatch repair protein MutS [Roseiflexus sp. RS-1]
gi|189083188|sp|A5UZK7.1|MUTS_ROSS1 RecName: Full=DNA mismatch repair protein MutS
gi|148569915|gb|ABQ92060.1| DNA mismatch repair protein MutS [Roseiflexus sp. RS-1]
Length = 1085
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 25/59 (42%), Positives = 37/59 (62%), Gaps = 12/59 (20%)
Query: 165 TGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
T D+T++PN D+E E + + L+TGPNM GKSTV+RQ+ LI ++AQ+
Sbjct: 788 TLDETFVPN---------DIEMDTETRQ---ICLITGPNMSGKSTVLRQVALIALMAQI 834
>gi|389817564|ref|ZP_10208157.1| DNA mismatch repair protein [Planococcus antarcticus DSM 14505]
gi|388464332|gb|EIM06663.1| DNA mismatch repair protein [Planococcus antarcticus DSM 14505]
Length = 841
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 28/73 (38%), Positives = 37/73 (50%), Gaps = 16/73 (21%)
Query: 154 ISALESLYPCAT---GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
IS +E +P Q Y+PN V+ K +LL+TGPNM GKST
Sbjct: 563 ISIIEGRHPVVEKMLNKQHYVPNDCVLAEDK-------------NMLLITGPNMSGKSTY 609
Query: 211 MRQLGLITILAQM 223
MRQ+ L +LAQ+
Sbjct: 610 MRQVALTIVLAQI 622
>gi|365924441|ref|ZP_09447204.1| DNA mismatch repair protein MutS [Lactobacillus mali KCTC 3596 =
DSM 20444]
gi|420265396|ref|ZP_14767956.1| DNA mismatch repair protein MutS [Lactobacillus mali KCTC 3596 =
DSM 20444]
gi|394428128|gb|EJF00719.1| DNA mismatch repair protein MutS [Lactobacillus mali KCTC 3596 =
DSM 20444]
Length = 875
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q+Y+PN ++ + +LL+TGPNM GKST MRQL L ++AQ+
Sbjct: 586 GKQSYVPNDVIMPK-------------DLNILLITGPNMSGKSTYMRQLALTVVMAQI 630
>gi|418407872|ref|ZP_12981189.1| DNA mismatch repair protein MutS [Agrobacterium tumefaciens 5A]
gi|358005858|gb|EHJ98183.1| DNA mismatch repair protein MutS [Agrobacterium tumefaciens 5A]
Length = 883
Score = 48.5 bits (114), Expect = 0.002, Method: Composition-based stats.
Identities = 22/38 (57%), Positives = 26/38 (68%)
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
S G + + LLTGPNMGGKST +RQ LI ILAQ+
Sbjct: 619 SAAAGGKNGAIWLLTGPNMGGKSTFLRQNALIAILAQI 656
>gi|365853736|ref|ZP_09394001.1| DNA mismatch repair protein MutS [Lactobacillus parafarraginis
F0439]
gi|363711894|gb|EHL95600.1| DNA mismatch repair protein MutS [Lactobacillus parafarraginis
F0439]
Length = 865
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/58 (46%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q Y+PN DV+ G + +VLL+TGPNM GKST MRQ+ L I+ QM
Sbjct: 578 GHQQYVPN---------DVDMGSD----TSVLLITGPNMSGKSTYMRQVALGVIMNQM 622
>gi|308198192|ref|XP_001387139.2| Mismatch repair ATPase MSH6 (MutS family) [Scheffersomyces stipitis
CBS 6054]
gi|149389076|gb|EAZ63116.2| Mismatch repair ATPase MSH6 (MutS family) [Scheffersomyces stipitis
CBS 6054]
Length = 1212
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/84 (36%), Positives = 39/84 (46%), Gaps = 14/84 (16%)
Query: 140 CVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLL 199
C P F+ E+ I E +PC +IPN ++G G E N LL
Sbjct: 921 CRPEFVDSEKGQ--IEFRELRHPCFLASSDFIPNDVILG--------GSEAN----FGLL 966
Query: 200 TGPNMGGKSTVMRQLGLITILAQM 223
TG N GKST+MR L ILAQ+
Sbjct: 967 TGANAAGKSTLMRTTALAVILAQI 990
>gi|350582426|ref|XP_003354885.2| PREDICTED: DNA mismatch repair protein Msh6-like, partial [Sus
scrofa]
Length = 1011
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 38/89 (42%), Positives = 52/89 (58%), Gaps = 13/89 (14%)
Query: 139 VCVPTFL--GLEEPHPYISALESLYPCAT----GDQTYIPNSTVIGRCKEDVESGGEGNR 192
+C P L G + P P++ S +PC T GD +IPN +IG C+E+ E N
Sbjct: 921 MCRPVILLPGEDTP-PFLYLKGSRHPCITKTFFGDD-FIPNDILIG-CEEEEEE----ND 973
Query: 193 KPTVLLLTGPNMGGKSTVMRQLGLITILA 221
K +L+TGPNMGGKST+MRQ L + +A
Sbjct: 974 KAYCVLVTGPNMGGKSTLMRQTWLGSAVA 1002
>gi|12055981|emb|CAC21114.1| DNA mismatch repair protein [Streptococcus pyogenes]
gi|12056007|emb|CAC21127.1| DNA mismatch repair protein [Streptococcus pyogenes]
Length = 135
Score = 48.5 bits (114), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 57 GVQEYIPNSISF-------------DQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 101
>gi|443311537|ref|ZP_21041164.1| DNA mismatch repair protein MutS [Synechocystis sp. PCC 7509]
gi|442778416|gb|ELR88682.1| DNA mismatch repair protein MutS [Synechocystis sp. PCC 7509]
Length = 867
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 24/54 (44%), Positives = 37/54 (68%), Gaps = 4/54 (7%)
Query: 170 YIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
++PNST++G E+ + KP +++LTGPN GKS +RQLGLI ++AQ+
Sbjct: 641 FVPNSTMLGW----EENSPDTLEKPDLVILTGPNASGKSCYLRQLGLIQLMAQV 690
>gi|428305631|ref|YP_007142456.1| DNA mismatch repair protein MutS [Crinalium epipsammum PCC 9333]
gi|428247166|gb|AFZ12946.1| DNA mismatch repair protein MutS [Crinalium epipsammum PCC 9333]
Length = 912
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 19/92 (20%)
Query: 136 QQGVCVPTFLGLEEPHPYISALESLYPCATGDQT-----YIPNSTVIGRCKEDVESGGEG 190
QG C P E I+ +E +P +Q+ ++PNST +G E
Sbjct: 619 HQGYCCPQM----EQGREINIIEGRHPVV--EQSLPAGFFVPNSTNLG--------SSEL 664
Query: 191 NRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
+ P +++LTGPN GKS +RQ+GLI ++AQ
Sbjct: 665 SESPDLIILTGPNASGKSCYLRQVGLIQLMAQ 696
>gi|375091619|ref|ZP_09737908.1| DNA mismatch repair protein MutS [Helcococcus kunzii ATCC 51366]
gi|374563141|gb|EHR34463.1| DNA mismatch repair protein MutS [Helcococcus kunzii ATCC 51366]
Length = 869
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 35/99 (35%), Positives = 50/99 (50%), Gaps = 23/99 (23%)
Query: 128 RNILKDMYQQGVCVPTFLGLEEPHPYISALESLYPCA--TGDQT-YIPNSTVIGRCKEDV 184
R LK+ Y C P F YIS + +P T D+ +I N T+IGR
Sbjct: 568 RVALKNNY----CRPIF----NSENYISISKGRHPVVEQTMDENQFIANDTLIGR----- 614
Query: 185 ESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ T+ ++TGPNM GKST MRQ+ LI +++Q+
Sbjct: 615 -------KNKTIQIITGPNMAGKSTYMRQVALIVLMSQI 646
>gi|212528164|ref|XP_002144239.1| DNA mismatch repair protein Msh2, putative [Talaromyces marneffei
ATCC 18224]
gi|111380652|gb|ABH09703.1| MSH2-like protein [Talaromyces marneffei]
gi|210073637|gb|EEA27724.1| DNA mismatch repair protein Msh2, putative [Talaromyces marneffei
ATCC 18224]
Length = 944
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 32/106 (30%), Positives = 52/106 (49%), Gaps = 18/106 (16%)
Query: 124 IFSQRNILKDMYQQGVCVPTFLGLEEPHPYISA----LESLYPCAT--GDQTYIPNSTVI 177
I + +++ V PT + HP + E+ +PC D ++I N +
Sbjct: 597 ILAHLDVIVSFAHVSVHAPTAYARPKMHPRGTGNTILKEARHPCMEMQDDISFITNDVSL 656
Query: 178 GRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
R GE + L++TGPNMGGKST +RQ+G+I ++AQ+
Sbjct: 657 VR--------GES----SFLIITGPNMGGKSTYIRQIGVIALMAQI 690
>gi|12056009|emb|CAC21128.1| DNA mismatch repair protein [Streptococcus pyogenes]
Length = 135
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 33/58 (56%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G Q YIPNS +++ ++ L+TGPNM GKST MRQL L I+AQM
Sbjct: 57 GVQEYIPNSI-------------SFDQQTSIQLITGPNMSGKSTYMRQLALTVIMAQM 101
>gi|380487665|emb|CCF37891.1| MutS domain V [Colletotrichum higginsianum]
Length = 1018
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 23/43 (53%), Positives = 29/43 (67%)
Query: 181 KEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ D GG G+ + L+TGPNM GKST +RQ LITILAQ+
Sbjct: 807 RNDCLVGGSGSPAGRLWLITGPNMAGKSTFLRQNALITILAQV 849
>gi|421225924|ref|ZP_15682658.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2070768]
gi|395588012|gb|EJG48347.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 2070768]
Length = 717
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPN+ + ED ++ L+TGPNM GKST MRQL + ++AQ+
Sbjct: 453 GAQTYIPNTIQMA---EDT----------SIQLVTGPNMSGKSTYMRQLAMTAVMAQL 497
>gi|341821182|emb|CCC57524.1| DNA mismatch repair protein mutS [Weissella thailandensis fsh4-2]
Length = 885
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 21/29 (72%), Positives = 25/29 (86%)
Query: 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223
T+LL+TGPNM GKST MRQL LI I+AQ+
Sbjct: 602 TILLITGPNMSGKSTYMRQLALIVIMAQI 630
>gi|256852232|ref|ZP_05557618.1| DNA mismatch repair protein MutS [Lactobacillus jensenii 27-2-CHN]
gi|260661736|ref|ZP_05862647.1| DNA mismatch repair protein MutS [Lactobacillus jensenii 115-3-CHN]
gi|256615278|gb|EEU20469.1| DNA mismatch repair protein MutS [Lactobacillus jensenii 27-2-CHN]
gi|260547483|gb|EEX23462.1| DNA mismatch repair protein MutS [Lactobacillus jensenii 115-3-CHN]
Length = 854
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/84 (32%), Positives = 42/84 (50%), Gaps = 13/84 (15%)
Query: 140 CVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLL 199
C P+F + ++ + D +YIPN D++ + +V L+
Sbjct: 552 CRPSFHQDSQEIKVVAGRHPVVEKVLADGSYIPN---------DIQMADD----TSVFLI 598
Query: 200 TGPNMGGKSTVMRQLGLITILAQM 223
TGPNM GKST MRQ+ LI ++AQ+
Sbjct: 599 TGPNMSGKSTYMRQMALIAVMAQV 622
>gi|443243179|ref|YP_007376404.1| DNA mismatch repair protein MutS [Nonlabens dokdonensis DSW-6]
gi|442800578|gb|AGC76383.1| DNA mismatch repair protein MutS [Nonlabens dokdonensis DSW-6]
Length = 871
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 38/73 (52%), Gaps = 18/73 (24%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP I E + P DQ YIPN + R + + +++TGPNM GKS +
Sbjct: 585 HPVI---EKMLPA---DQPYIPNDVQLDRDSQQI------------IMITGPNMSGKSAI 626
Query: 211 MRQLGLITILAQM 223
+RQ LI +LAQ+
Sbjct: 627 LRQTALIVLLAQI 639
>gi|334128878|ref|ZP_08502756.1| DNA mismatch repair protein MutS [Centipeda periodontii DSM 2778]
gi|333386120|gb|EGK57340.1| DNA mismatch repair protein MutS [Centipeda periodontii DSM 2778]
Length = 863
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 23/56 (41%), Positives = 34/56 (60%), Gaps = 12/56 (21%)
Query: 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
+ ++PN T D+ GG +L+TGPNM GKST MRQ+ L+T++AQ+
Sbjct: 594 EVFVPNDT-------DISHGGT-----ETMLITGPNMAGKSTYMRQVALLTLMAQV 637
>gi|189218126|ref|YP_001938768.1| Mismatch repair ATPase MutS [Methylacidiphilum infernorum V4]
gi|189184984|gb|ACD82169.1| Mismatch repair ATPase MutS [Methylacidiphilum infernorum V4]
Length = 834
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 34/98 (34%), Positives = 50/98 (51%), Gaps = 25/98 (25%)
Query: 131 LKDMYQQ-GVCVPTFLGLEEPHPYISALESLYPC-----ATGDQTYIPNSTVIGRCKEDV 184
L D+ Q+ C PT + P I E +P A+GD ++PNST +G +
Sbjct: 564 LADLAQERNYCKPTMVD----EPVIEIEEGRHPIVEQCMASGD--FVPNSTYLGPDQR-- 615
Query: 185 ESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQ 222
+LL+TGPNM GKST +RQ+ L+++LA
Sbjct: 616 -----------ILLITGPNMAGKSTYIRQVALLSLLAH 642
>gi|294085166|ref|YP_003551926.1| MutS 1 protein [Candidatus Puniceispirillum marinum IMCC1322]
gi|292664741|gb|ADE39842.1| MutS 1 protein [Candidatus Puniceispirillum marinum IMCC1322]
Length = 922
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 30/72 (41%), Positives = 37/72 (51%), Gaps = 15/72 (20%)
Query: 151 HPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTV 210
HP I E + P T +IPN D + G +G+ + LLTGPNM GKST
Sbjct: 628 HPVI---EMMLPAQT---PFIPN---------DCKLGADGDDAAAIWLLTGPNMAGKSTF 672
Query: 211 MRQLGLITILAQ 222
+RQ I ILAQ
Sbjct: 673 LRQNAHIIILAQ 684
>gi|433546742|ref|ZP_20503046.1| DNA mismatch repair protein MutS [Brevibacillus agri BAB-2500]
gi|432181962|gb|ELK39559.1| DNA mismatch repair protein MutS [Brevibacillus agri BAB-2500]
Length = 857
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/28 (71%), Positives = 25/28 (89%)
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
VLL+TGPNM GKST MRQ+ LIT++AQ+
Sbjct: 599 VLLITGPNMAGKSTYMRQIALITVMAQI 626
>gi|399055634|ref|ZP_10743329.1| DNA mismatch repair protein MutS [Brevibacillus sp. CF112]
gi|398046843|gb|EJL39427.1| DNA mismatch repair protein MutS [Brevibacillus sp. CF112]
Length = 857
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 20/28 (71%), Positives = 25/28 (89%)
Query: 196 VLLLTGPNMGGKSTVMRQLGLITILAQM 223
VLL+TGPNM GKST MRQ+ LIT++AQ+
Sbjct: 599 VLLITGPNMAGKSTYMRQIALITVMAQI 626
>gi|395789133|ref|ZP_10468663.1| DNA mismatch repair protein mutS [Bartonella taylorii 8TBB]
gi|395431267|gb|EJF97294.1| DNA mismatch repair protein mutS [Bartonella taylorii 8TBB]
Length = 914
Score = 48.1 bits (113), Expect = 0.002, Method: Composition-based stats.
Identities = 22/38 (57%), Positives = 27/38 (71%)
Query: 186 SGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
S E ++ + LLTGPNMGGKST +RQ LI I+AQM
Sbjct: 647 SAQENHQYAAIWLLTGPNMGGKSTFLRQNALIAIMAQM 684
>gi|259046523|ref|ZP_05736924.1| DNA mismatch repair protein HexA [Granulicatella adiacens ATCC
49175]
gi|259036688|gb|EEW37943.1| DNA mismatch repair protein HexA [Granulicatella adiacens ATCC
49175]
Length = 865
Score = 48.1 bits (113), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 26/58 (44%), Positives = 32/58 (55%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G TY+PNS + + +LL+TGPNM GKST MRQL L ILAQ+
Sbjct: 601 GQSTYVPNSISMSPDEH-------------ILLITGPNMSGKSTYMRQLALCVILAQI 645
>gi|419778317|ref|ZP_14304210.1| DNA mismatch repair protein MutS [Streptococcus oralis SK10]
gi|383187332|gb|EIC79785.1| DNA mismatch repair protein MutS [Streptococcus oralis SK10]
Length = 844
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPN+ + ED ++ L+TGPNM GKST MRQL + ++AQ+
Sbjct: 580 GAQTYIPNTIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAVMAQL 624
>gi|437999845|ref|YP_007183578.1| DNA mismatch repair protein MutS [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|451812749|ref|YP_007449202.1| DNA mismatch repair protein MutS [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
gi|429339079|gb|AFZ83501.1| DNA mismatch repair protein MutS [Candidatus Kinetoplastibacterium
blastocrithidii (ex Strigomonas culicis)]
gi|451778718|gb|AGF49598.1| DNA mismatch repair protein MutS [Candidatus Kinetoplastibacterium
blastocrithidii TCC012E]
Length = 878
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 20/33 (60%), Positives = 28/33 (84%)
Query: 191 NRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
N K ++++TGPNMGGKST MRQ+ LIT+LA++
Sbjct: 625 NNKKRMMIITGPNMGGKSTYMRQVALITLLARI 657
>gi|1490521|gb|AAB06045.1| hMSH3 [Homo sapiens]
gi|119616268|gb|EAW95862.1| mutS homolog 3 (E. coli), isoform CRA_b [Homo sapiens]
Length = 1128
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/74 (40%), Positives = 43/74 (58%), Gaps = 20/74 (27%)
Query: 151 HPYISALESLYPCATGDQ-TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKST 209
HP I L G+Q Y+PN+T + ED E V+++TGPNMGGKS+
Sbjct: 855 HPVIDVL-------LGEQDQYVPNNTDLS---EDSER---------VMIITGPNMGGKSS 895
Query: 210 VMRQLGLITILAQM 223
++Q+ LITI+AQ+
Sbjct: 896 YIKQVALITIMAQI 909
>gi|421303752|ref|ZP_15754413.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17484]
gi|395898169|gb|EJH09114.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17484]
Length = 835
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPN+ + ED ++ L+TGPNM GKST MRQL + ++AQ+
Sbjct: 571 GAQTYIPNTIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAVMAQL 615
>gi|401683891|ref|ZP_10815776.1| DNA mismatch repair protein MutS [Streptococcus sp. BS35b]
gi|418975559|ref|ZP_13523463.1| DNA mismatch repair protein MutS [Streptococcus oralis SK1074]
gi|383347542|gb|EID25520.1| DNA mismatch repair protein MutS [Streptococcus oralis SK1074]
gi|400186931|gb|EJO21136.1| DNA mismatch repair protein MutS [Streptococcus sp. BS35b]
Length = 844
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPN+ + ED ++ L+TGPNM GKST MRQL + ++AQ+
Sbjct: 580 GAQTYIPNTIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAVMAQL 624
>gi|322377998|ref|ZP_08052485.1| DNA mismatch repair protein MutS [Streptococcus sp. M334]
gi|321280980|gb|EFX57993.1| DNA mismatch repair protein MutS [Streptococcus sp. M334]
Length = 844
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPN+ + ED ++ L+TGPNM GKST MRQL + ++AQ+
Sbjct: 580 GAQTYIPNTIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAVMAQL 624
>gi|317129122|ref|YP_004095404.1| DNA mismatch repair protein MutS [Bacillus cellulosilyticus DSM
2522]
gi|315474070|gb|ADU30673.1| DNA mismatch repair protein MutS [Bacillus cellulosilyticus DSM
2522]
Length = 872
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 21/33 (63%), Positives = 26/33 (78%)
Query: 191 NRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
N + +LL+TGPNM GKST MRQL LI I+AQ+
Sbjct: 597 NEERGMLLITGPNMAGKSTYMRQLALIAIMAQI 629
>gi|419496255|ref|ZP_14035969.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47461]
gi|133950344|gb|ABO44019.1| MutS [Streptococcus pneumoniae]
gi|379591755|gb|EHZ56575.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47461]
Length = 844
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPN+ + ED ++ L+TGPNM GKST MRQL + ++AQ+
Sbjct: 580 GAQTYIPNTIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAVMAQL 624
>gi|443320386|ref|ZP_21049489.1| DNA mismatch repair protein MutS [Gloeocapsa sp. PCC 73106]
gi|442789896|gb|ELR99526.1| DNA mismatch repair protein MutS [Gloeocapsa sp. PCC 73106]
Length = 866
Score = 48.1 bits (113), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 29/91 (31%), Positives = 46/91 (50%), Gaps = 16/91 (17%)
Query: 136 QQGVCVPTFLGLEEPHPYISALESLYPC---ATGDQTYIPNSTVIGRCKEDVESGGEGNR 192
+QG C P P I+ + +P + G ++PNST +G D
Sbjct: 600 EQGYCCPEI----TPERKIAITDGRHPVVEQSLGAGFFVPNSTQMGESNSDC-------- 647
Query: 193 KPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
P +++LTGPN GKS +RQ+GLI +++Q+
Sbjct: 648 -PDLIILTGPNASGKSCYLRQVGLIQLMSQV 677
>gi|387789117|ref|YP_006254185.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae ST556]
gi|418117966|ref|ZP_12754929.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA18523]
gi|418165391|ref|ZP_12802053.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17371]
gi|418172231|ref|ZP_12808848.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA19451]
gi|418196741|ref|ZP_12833212.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47688]
gi|418198930|ref|ZP_12835382.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47778]
gi|419426031|ref|ZP_13966222.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 7533-05]
gi|419428139|ref|ZP_13968316.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 5652-06]
gi|419445598|ref|ZP_13985609.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA19923]
gi|419447754|ref|ZP_13987755.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 7879-04]
gi|419449862|ref|ZP_13989855.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 4075-00]
gi|419452004|ref|ZP_13991984.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae EU-NP02]
gi|419519796|ref|ZP_14059399.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA08825]
gi|421288484|ref|ZP_15739242.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA58771]
gi|353793414|gb|EHD73778.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA18523]
gi|353827171|gb|EHE07324.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA17371]
gi|353833434|gb|EHE13544.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA19451]
gi|353858773|gb|EHE38732.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47688]
gi|353859345|gb|EHE39296.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA47778]
gi|379138859|gb|AFC95650.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae ST556]
gi|379569418|gb|EHZ34388.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA19923]
gi|379611494|gb|EHZ76217.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 7879-04]
gi|379616015|gb|EHZ80715.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 5652-06]
gi|379616437|gb|EHZ81132.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 7533-05]
gi|379620806|gb|EHZ85456.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae 4075-00]
gi|379621223|gb|EHZ85871.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae EU-NP02]
gi|379637950|gb|EIA02496.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA08825]
gi|395885116|gb|EJG96143.1| DNA mismatch repair protein MutS [Streptococcus pneumoniae GA58771]
Length = 835
Score = 48.1 bits (113), Expect = 0.003, Method: Composition-based stats.
Identities = 25/58 (43%), Positives = 34/58 (58%), Gaps = 13/58 (22%)
Query: 166 GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLITILAQM 223
G QTYIPN+ + ED ++ L+TGPNM GKST MRQL + ++AQ+
Sbjct: 571 GAQTYIPNTIQMA---EDT----------SIQLITGPNMSGKSTYMRQLAMTAVMAQL 615
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.319 0.137 0.408
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 3,764,614,009
Number of Sequences: 23463169
Number of extensions: 157882474
Number of successful extensions: 426486
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5649
Number of HSP's successfully gapped in prelim test: 434
Number of HSP's that attempted gapping in prelim test: 420187
Number of HSP's gapped (non-prelim): 6309
length of query: 229
length of database: 8,064,228,071
effective HSP length: 138
effective length of query: 91
effective length of database: 9,121,278,045
effective search space: 830036302095
effective search space used: 830036302095
T: 11
A: 40
X1: 16 ( 7.4 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 74 (33.1 bits)