Query psy13262
Match_columns 229
No_of_seqs 200 out of 2650
Neff 7.5
Searched_HMMs 13730
Date Sat Aug 17 00:17:54 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13262.a3m -d /work/01045/syshi/HHdatabase/scop70.hhm -o /work/01045/syshi/hhsearch_scop/13262hhsearch_scop -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 d1wb9a2 c.37.1.12 (A:567-800) 99.8 1.5E-21 1.1E-25 163.4 7.9 73 139-228 1-75 (234)
2 d1ewqa2 c.37.1.12 (A:542-765) 99.8 1.6E-21 1.1E-25 162.3 7.7 69 139-228 1-69 (224)
3 d1ji0a_ c.37.1.12 (A:) Branche 98.8 1.7E-09 1.2E-13 89.5 5.4 48 152-214 5-52 (240)
4 d2awna2 c.37.1.12 (A:4-235) Ma 98.8 2.1E-09 1.5E-13 88.6 5.4 41 168-215 7-47 (232)
5 d1v43a3 c.37.1.12 (A:7-245) Hy 98.8 2.4E-09 1.8E-13 88.5 5.4 47 154-215 7-53 (239)
6 d1g2912 c.37.1.12 (1:1-240) Ma 98.8 3.3E-09 2.4E-13 87.7 5.5 48 153-215 3-50 (240)
7 d1sgwa_ c.37.1.12 (A:) Putativ 98.7 2E-09 1.5E-13 86.7 3.9 35 174-215 14-48 (200)
8 d1g6ha_ c.37.1.12 (A:) MJ1267 98.7 4.1E-09 3E-13 87.8 5.5 48 153-215 4-51 (254)
9 d1vpla_ c.37.1.12 (A:) Putativ 98.7 4.3E-09 3.1E-13 86.9 4.9 40 168-214 9-48 (238)
10 d1b0ua_ c.37.1.12 (A:) ATP-bin 98.7 6.7E-09 4.9E-13 86.7 4.9 47 154-215 3-49 (258)
11 d3d31a2 c.37.1.12 (A:1-229) Su 98.7 4.9E-09 3.6E-13 86.1 3.7 39 169-215 9-47 (229)
12 d3dhwc1 c.37.1.12 (C:1-240) Me 98.6 8.3E-09 6.1E-13 85.2 4.4 34 175-215 19-52 (240)
13 d1mv5a_ c.37.1.12 (A:) Multidr 98.6 6.1E-09 4.5E-13 86.2 3.5 37 171-214 11-48 (242)
14 d1l2ta_ c.37.1.12 (A:) MJ0796 98.6 9.5E-09 6.9E-13 84.4 3.8 33 176-215 20-52 (230)
15 d1oxxk2 c.37.1.12 (K:1-242) Gl 98.6 9.7E-09 7.1E-13 84.9 3.2 36 174-216 18-53 (242)
16 d1jj7a_ c.37.1.12 (A:) Peptide 98.6 1.5E-08 1.1E-12 84.2 3.8 47 153-214 11-60 (251)
17 d2pmka1 c.37.1.12 (A:467-707) 98.5 2.5E-08 1.8E-12 82.3 4.1 34 174-214 16-49 (241)
18 d1r0wa_ c.37.1.12 (A:) Cystic 98.5 3E-08 2.2E-12 83.6 4.1 36 172-214 47-82 (281)
19 d1l7vc_ c.37.1.12 (C:) ABC tra 98.4 2.9E-08 2.1E-12 81.4 2.3 34 175-215 13-46 (231)
20 d3b60a1 c.37.1.12 (A:329-581) 98.4 5.6E-08 4.1E-12 80.7 4.1 33 175-214 29-61 (253)
21 d2hyda1 c.37.1.12 (A:324-578) 98.4 5.6E-08 4.1E-12 80.8 2.9 46 154-214 17-64 (255)
22 g1xew.1 c.37.1.12 (X:,Y:) Smc 97.4 4.3E-05 3.1E-09 63.7 4.3 23 195-217 27-49 (329)
23 d1w1wa_ c.37.1.12 (A:) Smc hea 97.0 0.00023 1.7E-08 60.6 3.9 23 195-217 26-48 (427)
24 d1sxja2 c.37.1.20 (A:295-547) 96.4 0.0011 8E-08 52.7 4.0 23 194-216 52-74 (253)
25 d1iqpa2 c.37.1.20 (A:2-232) Re 96.3 0.00095 6.9E-08 52.6 3.1 23 194-216 45-67 (231)
26 d1sxjd2 c.37.1.20 (D:26-262) R 96.1 0.0014 1E-07 51.4 3.3 22 195-216 34-55 (237)
27 d1gvnb_ c.37.1.21 (B:) Plasmid 96.1 0.002 1.5E-07 51.3 3.9 23 194-216 32-54 (273)
28 d1cr2a_ c.37.1.11 (A:) Gene 4 95.9 0.0029 2.1E-07 51.0 4.3 33 195-228 36-68 (277)
29 d1in4a2 c.37.1.20 (A:17-254) H 95.9 0.0021 1.5E-07 50.7 3.2 21 195-215 36-56 (238)
30 d1sxje2 c.37.1.20 (E:4-255) Re 95.6 0.0025 1.8E-07 50.4 2.7 22 195-216 34-55 (252)
31 d1sxjc2 c.37.1.20 (C:12-238) R 95.6 0.00099 7.2E-08 52.3 0.2 22 195-216 36-57 (227)
32 d2p67a1 c.37.1.10 (A:1-327) LA 95.6 0.0037 2.7E-07 52.7 3.8 23 194-216 54-76 (327)
33 d1fnna2 c.37.1.20 (A:1-276) CD 95.5 0.0045 3.3E-07 48.7 3.9 24 193-216 42-65 (276)
34 d1ixsb2 c.37.1.20 (B:4-242) Ho 95.5 0.0038 2.8E-07 49.2 3.3 23 194-216 35-57 (239)
35 d1sxjb2 c.37.1.20 (B:7-230) Re 95.5 0.0039 2.8E-07 48.8 3.2 22 195-216 37-58 (224)
36 d1p9ra_ c.37.1.11 (A:) Extrace 95.3 0.0052 3.8E-07 53.0 3.6 21 194-214 158-178 (401)
37 d1ixza_ c.37.1.20 (A:) AAA dom 95.2 0.0085 6.2E-07 48.2 4.6 28 195-227 43-70 (247)
38 d2fnaa2 c.37.1.20 (A:1-283) Ar 95.2 0.0064 4.7E-07 47.8 3.6 21 195-215 30-50 (283)
39 d1g6oa_ c.37.1.11 (A:) Hexamer 95.0 0.0041 3E-07 52.3 2.2 20 195-214 167-186 (323)
40 d1tf7a1 c.37.1.11 (A:14-255) C 94.9 0.014 1E-06 44.8 4.8 26 195-220 27-52 (242)
41 d1lv7a_ c.37.1.20 (A:) AAA dom 94.8 0.0096 7E-07 48.2 3.7 21 195-215 46-66 (256)
42 d2qm8a1 c.37.1.10 (A:5-327) Me 94.6 0.011 7.8E-07 49.6 3.8 23 194-216 51-73 (323)
43 d1tf7a2 c.37.1.11 (A:256-497) 94.5 0.017 1.2E-06 45.1 4.5 24 195-218 27-50 (242)
44 d1d2na_ c.37.1.20 (A:) Hexamer 94.5 0.011 7.8E-07 47.5 3.3 22 195-216 41-62 (246)
45 d1e32a2 c.37.1.20 (A:201-458) 94.4 0.015 1.1E-06 46.8 4.0 22 195-216 39-60 (258)
46 d2i1qa2 c.37.1.11 (A:65-322) D 94.0 0.016 1.2E-06 44.6 3.4 25 195-219 35-59 (258)
47 d1szpa2 c.37.1.11 (A:145-395) 94.0 0.016 1.1E-06 44.7 3.3 23 195-217 35-57 (251)
48 d1r7ra3 c.37.1.20 (A:471-735) 93.9 0.018 1.3E-06 46.5 3.5 22 195-216 42-63 (265)
49 d1u0la2 c.37.1.8 (A:69-293) Pr 93.6 0.021 1.5E-06 45.4 3.4 20 195-214 96-115 (225)
50 d1pzna2 c.37.1.11 (A:96-349) D 93.4 0.028 2E-06 43.7 3.8 23 195-217 37-59 (254)
51 d1v5wa_ c.37.1.11 (A:) Meiotic 93.3 0.029 2.1E-06 43.4 3.7 24 195-218 38-61 (258)
52 d1w5sa2 c.37.1.20 (A:7-293) CD 93.2 0.014 1E-06 45.9 1.7 20 196-215 48-67 (287)
53 d1ofha_ c.37.1.20 (A:) HslU {H 93.1 0.024 1.7E-06 46.8 3.1 22 195-216 50-71 (309)
54 d1njfa_ c.37.1.20 (A:) delta p 92.9 0.036 2.7E-06 43.6 3.8 22 194-215 34-55 (239)
55 d1sq5a_ c.37.1.6 (A:) Pantothe 92.9 0.035 2.6E-06 46.0 3.8 21 195-215 81-101 (308)
56 d1e9ra_ c.37.1.11 (A:) Bacteri 92.7 0.031 2.3E-06 47.4 3.3 32 195-228 51-82 (433)
57 d1odfa_ c.37.1.6 (A:) Hypothet 92.6 0.043 3.1E-06 45.1 3.9 21 194-214 27-47 (286)
58 d1nlfa_ c.37.1.11 (A:) Hexamer 92.5 0.081 5.9E-06 41.7 5.5 23 195-217 30-52 (274)
59 d1h65a_ c.37.1.8 (A:) Chloropl 91.8 0.049 3.5E-06 43.6 3.2 20 195-214 33-52 (257)
60 d1t9ha2 c.37.1.8 (A:68-298) Pr 91.6 0.022 1.6E-06 45.5 0.8 20 195-214 98-117 (231)
61 d1w36d1 c.37.1.19 (D:2-360) Ex 91.1 0.048 3.5E-06 46.0 2.6 20 195-214 164-183 (359)
62 d1htwa_ c.37.1.18 (A:) Hypothe 91.0 0.084 6.1E-06 39.5 3.6 21 195-215 34-54 (158)
63 d1svma_ c.37.1.20 (A:) Papillo 90.5 0.095 6.9E-06 44.2 4.0 23 193-215 153-175 (362)
64 d1xpua3 c.37.1.11 (A:129-417) 90.0 0.18 1.3E-05 41.3 5.2 28 195-222 44-71 (289)
65 d1g41a_ c.37.1.20 (A:) HslU {H 89.7 0.085 6.2E-06 45.8 3.1 23 195-217 50-72 (443)
66 d1l8qa2 c.37.1.20 (A:77-289) C 89.3 0.11 7.9E-06 40.3 3.1 23 195-217 37-59 (213)
67 d1u94a1 c.37.1.11 (A:6-268) Re 88.8 0.17 1.3E-05 40.6 4.2 24 195-218 55-78 (263)
68 d1r6bx3 c.37.1.20 (X:437-751) 88.7 0.16 1.1E-05 41.8 3.9 23 195-217 53-75 (315)
69 d1g8pa_ c.37.1.20 (A:) ATPase 88.4 0.086 6.2E-06 43.3 2.1 22 195-216 29-50 (333)
70 d2a5yb3 c.37.1.20 (B:109-385) 88.1 0.18 1.3E-05 40.5 3.8 22 194-215 44-65 (277)
71 d1tq4a_ c.37.1.8 (A:) Interfer 86.5 0.2 1.4E-05 42.6 3.3 20 195-214 57-76 (400)
72 d1f5na2 c.37.1.8 (A:7-283) Int 85.0 0.25 1.8E-05 39.9 3.0 20 195-214 33-52 (277)
73 d1xp8a1 c.37.1.11 (A:15-282) R 84.5 0.43 3.1E-05 38.3 4.3 23 195-217 58-80 (268)
74 d1u0ja_ c.37.1.20 (A:) Rep 40 83.8 0.44 3.2E-05 38.1 4.1 24 193-216 103-126 (267)
75 d1jbka_ c.37.1.20 (A:) ClpB, A 83.7 0.45 3.3E-05 36.5 3.9 25 194-218 43-67 (195)
76 d1r6bx2 c.37.1.20 (X:169-436) 83.2 0.43 3.2E-05 38.3 3.8 24 194-217 39-62 (268)
77 d1w44a_ c.37.1.11 (A:) NTPase 83.1 0.33 2.4E-05 40.1 3.1 23 195-217 124-146 (321)
78 d1mo6a1 c.37.1.11 (A:1-269) Re 83.0 0.51 3.7E-05 37.9 4.1 21 195-215 61-81 (269)
79 d1um8a_ c.37.1.20 (A:) ClpX {H 82.1 0.43 3.1E-05 40.0 3.4 23 195-217 69-91 (364)
80 d1qvra3 c.37.1.20 (A:536-850) 82.0 0.45 3.3E-05 38.9 3.5 24 195-218 54-77 (315)
81 d2mysa2 c.37.1.9 (A:4-33,A:80- 77.7 1 7.3E-05 41.6 4.7 29 194-222 123-152 (794)
82 d1tuea_ c.37.1.20 (A:) Replica 77.5 0.71 5.2E-05 35.6 3.1 22 193-214 52-73 (205)
83 d1d0xa2 c.37.1.9 (A:2-33,A:80- 76.5 1.2 9E-05 40.4 4.9 28 194-221 125-153 (712)
84 d2akab1 c.37.1.8 (B:6-304) Dyn 76.4 0.78 5.7E-05 36.4 3.2 21 195-215 27-47 (299)
85 d2jdid3 c.37.1.11 (D:82-357) C 76.2 1 7.4E-05 36.3 3.8 24 195-218 69-92 (276)
86 d2bcgg3 d.16.1.6 (G:302-399) G 75.7 1.1 8E-05 30.3 3.2 27 16-42 42-70 (98)
87 d1w7ja2 c.37.1.9 (A:63-792) My 75.2 1.3 9.1E-05 40.4 4.6 21 194-214 94-114 (730)
88 d1kk8a2 c.37.1.9 (A:1-28,A:77- 75.0 1.1 8E-05 41.2 4.2 21 194-214 121-141 (789)
89 d1br2a2 c.37.1.9 (A:80-789) My 74.7 1.4 9.8E-05 40.1 4.7 21 194-214 91-111 (710)
90 d2jdia3 c.37.1.11 (A:95-379) C 73.4 1.2 8.6E-05 36.0 3.5 29 195-223 69-97 (285)
91 d1vg0a2 d.16.1.6 (A:445-557) R 72.6 1.2 9.1E-05 30.8 3.0 30 12-41 36-67 (113)
92 d1lkxa_ c.37.1.9 (A:) Myosin S 72.5 1.1 8.2E-05 40.5 3.5 21 194-214 86-106 (684)
93 d1d5ta2 d.16.1.6 (A:292-388) G 71.6 1.6 0.00012 29.4 3.2 28 15-42 40-69 (97)
94 d1fx0a3 c.37.1.11 (A:97-372) C 69.1 1.1 8.2E-05 35.9 2.4 21 195-215 68-88 (276)
95 d1qvra2 c.37.1.20 (A:149-535) 69.0 1.3 9.5E-05 37.2 2.9 23 195-217 44-66 (387)
96 d2fz4a1 c.37.1.19 (A:24-229) D 67.7 2.2 0.00016 32.0 3.8 29 195-228 86-114 (206)
97 d1gkub1 c.37.1.16 (B:1-250) He 64.6 1.4 9.9E-05 33.7 2.0 17 195-211 59-75 (237)
98 d2p6ra3 c.37.1.19 (A:1-202) He 63.0 1.3 9.8E-05 32.8 1.6 16 195-210 41-56 (202)
99 d1g8fa3 c.37.1.15 (A:390-511) 58.2 3.2 0.00023 29.1 2.8 20 195-214 7-26 (122)
100 d1hv8a1 c.37.1.19 (A:3-210) Pu 54.9 3.4 0.00024 30.9 2.7 30 195-224 43-72 (208)
101 d1puja_ c.37.1.8 (A:) Probable 45.1 6.9 0.00051 30.4 3.2 20 195-214 113-132 (273)
102 d1t5la1 c.37.1.19 (A:2-414) Nu 39.3 10 0.00075 31.7 3.6 30 195-229 32-61 (413)
103 d1rh7a_ g.77.1.1 (A:) Resistin 39.3 9.6 0.0007 24.3 2.5 36 3-38 12-47 (81)
104 d1q0ua_ c.37.1.19 (A:) Probabl 38.1 4 0.00029 30.1 0.6 17 195-211 39-55 (209)
105 d1t6na_ c.37.1.19 (A:) Spliceo 36.6 8.3 0.0006 28.6 2.3 17 195-211 39-55 (207)
106 d1wrba1 c.37.1.19 (A:164-401) 36.4 14 0.001 27.9 3.8 27 195-221 59-85 (238)
107 d1eg7a_ c.37.1.10 (A:) Formylt 36.3 19 0.0014 31.1 4.9 30 195-226 52-85 (549)
108 d2gc6a2 c.72.2.2 (A:1-296) Fol 33.9 19 0.0014 27.9 4.3 29 194-226 39-67 (296)
109 d2g9na1 c.37.1.19 (A:21-238) I 30.3 8.7 0.00063 28.8 1.4 17 195-211 50-66 (218)
110 d1qdea_ c.37.1.19 (A:) Initiat 29.4 13 0.00094 27.6 2.3 17 195-211 48-64 (212)
111 d1s2ma1 c.37.1.19 (A:46-251) P 28.5 13 0.00096 27.2 2.2 17 195-211 39-55 (206)
112 d2j0sa1 c.37.1.19 (A:22-243) P 28.4 11 0.00082 28.3 1.8 17 195-211 55-71 (222)
113 d1oywa2 c.37.1.19 (A:1-206) Re 27.5 9.5 0.00069 27.7 1.2 17 195-211 41-57 (206)
114 d1veca_ c.37.1.19 (A:) DEAD bo 25.3 16 0.0011 26.9 2.1 17 195-211 41-57 (206)
115 d1o5za2 c.72.2.2 (A:-2-293) Fo 21.6 33 0.0024 26.4 3.5 27 195-225 44-70 (296)
116 d2d9qb1 b.1.1.3 (B:3-96) Granu 21.1 20 0.0014 23.6 1.6 21 10-32 11-31 (94)
117 d1jmva_ c.26.2.4 (A:) Universa 20.7 30 0.0022 22.7 2.8 31 197-229 105-135 (140)
118 d1gm5a3 c.37.1.19 (A:286-549) 20.1 40 0.0029 26.0 3.7 27 194-220 104-130 (264)
No 1
>d1wb9a2 c.37.1.12 (A:567-800) DNA repair protein MutS, the C-terminal domain {Escherichia coli [TaxId: 562]}
Probab=99.84 E-value=1.5e-21 Score=163.36 Aligned_cols=73 Identities=36% Similarity=0.543 Sum_probs=65.4
Q ss_pred CccceEecCCCCCceEEeccccCcccC--CCceeeCCeeEecCccceeccCCCCCCCCcEEEEEeCCCCChHHHHHHHHH
Q psy13262 139 VCVPTFLGLEEPHPYISALESLYPCAT--GDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGL 216 (229)
Q Consensus 139 ~~~P~~~~~~~~~~~i~~~~~~hpll~--~~~~~vp~~~~l~~~~~~~~~~~~~~~~~~~~~ltGpN~~GKStlLk~i~l 216 (229)
||+|++.++ +.++++++|||++. ....+||||+.+++ +.+.++|||||||||||+||++||
T Consensus 1 y~~P~~~~~----~~l~i~~~rHPlle~~~~~~~VpNdi~l~~-------------~~~~~iiTGpN~~GKSt~lk~i~l 63 (234)
T d1wb9a2 1 YTCPTFIDK----PGIRITEGRHPVVEQVLNEPFIANPLNLSP-------------QRRMLIITGPNMGGKSTYMRQTAL 63 (234)
T ss_dssp CBCCEECSS----SCEEEEEECCTTHHHHCSSCCCCEEEEECS-------------SSCEEEEECCTTSSHHHHHHHHHH
T ss_pred CCCCEEcCC----CcEEEEEeECCEEEcccCCCccceeEEECC-------------CceEEEEeccCchhhHHHHHHHHH
Confidence 689999874 67999999999984 23579999999986 458999999999999999999999
Q ss_pred HHHHHhcCCCcc
Q psy13262 217 ITILAQMENPQL 228 (229)
Q Consensus 217 ~~~ma~~G~~v~ 228 (229)
+++|||+|+|||
T Consensus 64 ~~~laq~G~~Vp 75 (234)
T d1wb9a2 64 IALMAYIGSYVP 75 (234)
T ss_dssp HHHHHTTTCCBS
T ss_pred HHHHHHcCCeEe
Confidence 999999999998
No 2
>d1ewqa2 c.37.1.12 (A:542-765) DNA repair protein MutS, the C-terminal domain {Thermus aquaticus [TaxId: 271]}
Probab=99.83 E-value=1.6e-21 Score=162.25 Aligned_cols=69 Identities=32% Similarity=0.492 Sum_probs=63.1
Q ss_pred CccceEecCCCCCceEEeccccCcccCCCceeeCCeeEecCccceeccCCCCCCCCcEEEEEeCCCCChHHHHHHHHHHH
Q psy13262 139 VCVPTFLGLEEPHPYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGLIT 218 (229)
Q Consensus 139 ~~~P~~~~~~~~~~~i~~~~~~hpll~~~~~~vp~~~~l~~~~~~~~~~~~~~~~~~~~~ltGpN~~GKStlLk~i~l~~ 218 (229)
||+|++.++ ++++++|||++.....+||||+.+++ +.++|||||+|||||+||++|+++
T Consensus 1 y~~P~~~~~------~~i~~~rHPlle~~~~~VpNdi~~~~---------------~~~iiTGpN~~GKSt~lk~i~l~~ 59 (224)
T d1ewqa2 1 YVRPRFGDR------LQIRAGRHPVVERRTEFVPNDLEMAH---------------ELVLITGPNMAGKSTFLRQTALIA 59 (224)
T ss_dssp CBCCEESSS------EEEEEECCTTGGGTSCCCCEEEEESS---------------CEEEEESCSSSSHHHHHHHHHHHH
T ss_pred CCCCccCCc------EEEEeCcCCEEcCCCCeecceEEeCC---------------cEEEEECCCccccchhhhhhHHHH
Confidence 689999763 78899999999755689999999986 799999999999999999999999
Q ss_pred HHHhcCCCcc
Q psy13262 219 ILAQMENPQL 228 (229)
Q Consensus 219 ~ma~~G~~v~ 228 (229)
+|||+|+|||
T Consensus 60 ilAq~G~~vp 69 (224)
T d1ewqa2 60 LLAQVGSFVP 69 (224)
T ss_dssp HHHTTTCCBS
T ss_pred HHHhccceee
Confidence 9999999998
No 3
>d1ji0a_ c.37.1.12 (A:) Branched chain aminoacid ABC transporter {Thermotoga maritima, TM1139 [TaxId: 2336]}
Probab=98.81 E-value=1.7e-09 Score=89.53 Aligned_cols=48 Identities=21% Similarity=0.295 Sum_probs=43.3
Q ss_pred ceEEeccccCcccCCCceeeCCeeEecCccceeccCCCCCCCCcEEEEEeCCCCChHHHHHHH
Q psy13262 152 PYISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 152 ~~i~~~~~~hpll~~~~~~vp~~~~l~~~~~~~~~~~~~~~~~~~~~ltGpN~~GKStlLk~i 214 (229)
++++++++ ...|++...++++||++++| ++++|.||||+|||||||++
T Consensus 5 ~~Lev~~l--------~k~yg~~~al~~vs~~i~~G-------ei~~liGpnGaGKSTl~~~i 52 (240)
T d1ji0a_ 5 IVLEVQSL--------HVYYGAIHAIKGIDLKVPRG-------QIVTLIGANGAGKTTTLSAI 52 (240)
T ss_dssp EEEEEEEE--------EEEETTEEEEEEEEEEEETT-------CEEEEECSTTSSHHHHHHHH
T ss_pred eEEEEeeE--------EEEECCEEEEeeeeEEECCC-------CEEEEECCCCCcHHHHHHHH
Confidence 57788776 55678888999999999999 99999999999999999998
No 4
>d2awna2 c.37.1.12 (A:4-235) Maltose transport protein MalK, N-terminal domain {Escherichia coli [TaxId: 562]}
Probab=98.79 E-value=2.1e-09 Score=88.56 Aligned_cols=41 Identities=24% Similarity=0.390 Sum_probs=37.3
Q ss_pred ceeeCCeeEecCccceeccCCCCCCCCcEEEEEeCCCCChHHHHHHHH
Q psy13262 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLG 215 (229)
Q Consensus 168 ~~~vp~~~~l~~~~~~~~~~~~~~~~~~~~~ltGpN~~GKStlLk~i~ 215 (229)
...|++...++++||++++| ++++|.||||||||||||+++
T Consensus 7 ~k~yg~~~~l~~isl~i~~G-------ei~~liGpsGsGKSTLl~~i~ 47 (232)
T d2awna2 7 TKAWGEVVVSKDINLDIHEG-------EFVVFVGPSGCGKSTLLRMIA 47 (232)
T ss_dssp EEEETTEEEEEEEEEEECTT-------CEEEEECCTTSSHHHHHHHHH
T ss_pred EEEECCEEEEeeeEEEEcCC-------CEEEEECCCCChHHHHHHHHh
Confidence 34568888999999999999 999999999999999999984
No 5
>d1v43a3 c.37.1.12 (A:7-245) Hypothetical protein PH0022, N-terminal domain {Pyrococcus horikoshii [TaxId: 53953]}
Probab=98.78 E-value=2.4e-09 Score=88.48 Aligned_cols=47 Identities=23% Similarity=0.392 Sum_probs=41.3
Q ss_pred EEeccccCcccCCCceeeCCeeEecCccceeccCCCCCCCCcEEEEEeCCCCChHHHHHHHH
Q psy13262 154 ISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLG 215 (229)
Q Consensus 154 i~~~~~~hpll~~~~~~vp~~~~l~~~~~~~~~~~~~~~~~~~~~ltGpN~~GKStlLk~i~ 215 (229)
|+++++ ...|++...+++++|++++| ++++|.||||||||||||+++
T Consensus 7 I~v~nl--------sk~yg~~~al~~vsl~v~~G-------e~~~liGpsGaGKSTLl~~i~ 53 (239)
T d1v43a3 7 VKLENL--------TKRFGNFTAVNKLNLTIKDG-------EFLVLLGPSGCGKTTTLRMIA 53 (239)
T ss_dssp EEEEEE--------EEEETTEEEEEEEEEEECTT-------CEEEEECCTTSSHHHHHHHHH
T ss_pred EEEEEE--------EEEECCEEEEcceeEEECCC-------CEEEEECCCCChHHHHHHHHH
Confidence 566665 45568889999999999999 999999999999999999984
No 6
>d1g2912 c.37.1.12 (1:1-240) Maltose transport protein MalK, N-terminal domain {Archaeon Thermococcus litoralis [TaxId: 2265]}
Probab=98.75 E-value=3.3e-09 Score=87.69 Aligned_cols=48 Identities=21% Similarity=0.378 Sum_probs=41.5
Q ss_pred eEEeccccCcccCCCceeeCCeeEecCccceeccCCCCCCCCcEEEEEeCCCCChHHHHHHHH
Q psy13262 153 YISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLG 215 (229)
Q Consensus 153 ~i~~~~~~hpll~~~~~~vp~~~~l~~~~~~~~~~~~~~~~~~~~~ltGpN~~GKStlLk~i~ 215 (229)
.++++++ ...+++...++++||++++| ++++|.|||||||||+||+++
T Consensus 3 ~i~v~nl--------~k~yg~~~al~~vsl~i~~G-------e~~~liG~sGaGKSTll~~i~ 50 (240)
T d1g2912 3 GVRLVDV--------WKVFGEVTAVREMSLEVKDG-------EFMILLGPSGCGKTTTLRMIA 50 (240)
T ss_dssp EEEEEEE--------EEEETTEEEEEEEEEEEETT-------CEEEEECSTTSSHHHHHHHHH
T ss_pred cEEEEeE--------EEEECCEEEEcceeeEEcCC-------CEEEEECCCCChHHHHHHHHh
Confidence 4566665 45567888999999999999 999999999999999999984
No 7
>d1sgwa_ c.37.1.12 (A:) Putative ABC transporter PF0895 {Pyrococcus furiosus [TaxId: 2261]}
Probab=98.75 E-value=2e-09 Score=86.66 Aligned_cols=35 Identities=31% Similarity=0.566 Sum_probs=32.8
Q ss_pred eeEecCccceeccCCCCCCCCcEEEEEeCCCCChHHHHHHHH
Q psy13262 174 STVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLG 215 (229)
Q Consensus 174 ~~~l~~~~~~~~~~~~~~~~~~~~~ltGpN~~GKStlLk~i~ 215 (229)
..++++++|++++| ++++|+||||+|||||||+++
T Consensus 14 ~~vl~~is~~i~~G-------ei~~l~G~NGsGKSTLl~~i~ 48 (200)
T d1sgwa_ 14 KPVLERITMTIEKG-------NVVNFHGPNGIGKTTLLKTIS 48 (200)
T ss_dssp SEEEEEEEEEEETT-------CCEEEECCTTSSHHHHHHHHT
T ss_pred CeEEeceEEEEcCC-------CEEEEECCCCChHHHHHHHHh
Confidence 46899999999999 999999999999999999983
No 8
>d1g6ha_ c.37.1.12 (A:) MJ1267 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=98.74 E-value=4.1e-09 Score=87.81 Aligned_cols=48 Identities=25% Similarity=0.392 Sum_probs=41.9
Q ss_pred eEEeccccCcccCCCceeeCCeeEecCccceeccCCCCCCCCcEEEEEeCCCCChHHHHHHHH
Q psy13262 153 YISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLG 215 (229)
Q Consensus 153 ~i~~~~~~hpll~~~~~~vp~~~~l~~~~~~~~~~~~~~~~~~~~~ltGpN~~GKStlLk~i~ 215 (229)
+++++++ ...+++...++++||++++| ++++|.||||+|||||+|++.
T Consensus 4 iL~v~nl--------sk~yg~~~aL~~vs~~v~~G-------ei~~liG~nGaGKSTLl~~i~ 51 (254)
T d1g6ha_ 4 ILRTENI--------VKYFGEFKALDGVSISVNKG-------DVTLIIGPNGSGKSTLINVIT 51 (254)
T ss_dssp EEEEEEE--------EEEETTEEEEEEECCEEETT-------CEEEEECSTTSSHHHHHHHHT
T ss_pred eEEEEEE--------EEEECCeEEEcceEEEECCC-------CEEEEECCCCCcHHHHHHHHH
Confidence 4666665 55678888999999999999 999999999999999999983
No 9
>d1vpla_ c.37.1.12 (A:) Putative ABC transporter TM0544 {Thermotoga maritima [TaxId: 2336]}
Probab=98.71 E-value=4.3e-09 Score=86.95 Aligned_cols=40 Identities=28% Similarity=0.495 Sum_probs=37.5
Q ss_pred ceeeCCeeEecCccceeccCCCCCCCCcEEEEEeCCCCChHHHHHHH
Q psy13262 168 QTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 168 ~~~vp~~~~l~~~~~~~~~~~~~~~~~~~~~ltGpN~~GKStlLk~i 214 (229)
...++....+++++|++++| ++++|.||||+|||||||.+
T Consensus 9 ~k~yg~~~vl~~vs~~v~~G-------ei~glvG~nGaGKSTLl~~l 48 (238)
T d1vpla_ 9 RKRIGKKEILKGISFEIEEG-------EIFGLIGPNGAGKTTTLRII 48 (238)
T ss_dssp EEEETTEEEEEEEEEEECTT-------CEEEEECCTTSSHHHHHHHH
T ss_pred EEEECCEEEEccceeEEcCC-------CEEEEECCCCCCHHHHHHHH
Confidence 45678899999999999999 99999999999999999998
No 10
>d1b0ua_ c.37.1.12 (A:) ATP-binding subunit of the histidine permease {Salmonella typhimurium [TaxId: 90371]}
Probab=98.67 E-value=6.7e-09 Score=86.74 Aligned_cols=47 Identities=19% Similarity=0.341 Sum_probs=40.8
Q ss_pred EEeccccCcccCCCceeeCCeeEecCccceeccCCCCCCCCcEEEEEeCCCCChHHHHHHHH
Q psy13262 154 ISALESLYPCATGDQTYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLG 215 (229)
Q Consensus 154 i~~~~~~hpll~~~~~~vp~~~~l~~~~~~~~~~~~~~~~~~~~~ltGpN~~GKStlLk~i~ 215 (229)
++++++ ...|+....++++||++++| ++++|+||||||||||+|+++
T Consensus 3 Lev~nl--------~k~yg~~~al~~vs~~i~~G-------Ei~~iiG~sGsGKSTLl~~i~ 49 (258)
T d1b0ua_ 3 LHVIDL--------HKRYGGHEVLKGVSLQARAG-------DVISIIGSSGSGKSTFLRCIN 49 (258)
T ss_dssp EEEEEE--------EEEETTEEEEEEEEEEECTT-------CEEEEECCTTSSHHHHHHHHT
T ss_pred EEEEEE--------EEEECCEEEEcceeeEEcCC-------CEEEEECCCCCcHHHHHHHHH
Confidence 556665 44567888999999999999 999999999999999999983
No 11
>d3d31a2 c.37.1.12 (A:1-229) Sulfate/molybdate ABC transporter, ATP-binding protein {Methanosarcina acetivorans [TaxId: 2214]}
Probab=98.66 E-value=4.9e-09 Score=86.07 Aligned_cols=39 Identities=23% Similarity=0.360 Sum_probs=34.6
Q ss_pred eeeCCeeEecCccceeccCCCCCCCCcEEEEEeCCCCChHHHHHHHH
Q psy13262 169 TYIPNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLG 215 (229)
Q Consensus 169 ~~vp~~~~l~~~~~~~~~~~~~~~~~~~~~ltGpN~~GKStlLk~i~ 215 (229)
..+++ ..++++||++++| ++++|.|||||||||+||+++
T Consensus 9 k~y~~-~aL~~vs~~i~~G-------e~~~liGpsGaGKSTll~~l~ 47 (229)
T d3d31a2 9 RKWKN-FSLDNLSLKVESG-------EYFVILGPTGAGKTLFLELIA 47 (229)
T ss_dssp EECSS-CEEEEEEEEECTT-------CEEEEECCCTHHHHHHHHHHH
T ss_pred EEeCC-EEEeeeEEEECCC-------CEEEEECCCCCcHHHHHHHHh
Confidence 33454 6899999999999 999999999999999999984
No 12
>d3dhwc1 c.37.1.12 (C:1-240) Methionine import ATP-binding protein MetN {Escherichia coli [TaxId: 562]}
Probab=98.63 E-value=8.3e-09 Score=85.24 Aligned_cols=34 Identities=24% Similarity=0.392 Sum_probs=32.0
Q ss_pred eEecCccceeccCCCCCCCCcEEEEEeCCCCChHHHHHHHH
Q psy13262 175 TVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLG 215 (229)
Q Consensus 175 ~~l~~~~~~~~~~~~~~~~~~~~~ltGpN~~GKStlLk~i~ 215 (229)
..+++++|+++.| ++++|.||||||||||||+++
T Consensus 19 ~al~~vsl~i~~G-------e~~~iiG~sGsGKSTLl~~i~ 52 (240)
T d3dhwc1 19 QALNNVSLHVPAG-------QIYGVIGASGAGKSTLIRCVN 52 (240)
T ss_dssp EEEEEEEEEECSS-------CEEEEEESTTSSHHHHHHHHT
T ss_pred EEeeceeEEEcCC-------CEEEEECCCCCCHHHHHHHHc
Confidence 4799999999999 999999999999999999983
No 13
>d1mv5a_ c.37.1.12 (A:) Multidrug resistance ABC transporter LmrA, C-terminal domain {Lactococcus lactis [TaxId: 1358]}
Probab=98.63 E-value=6.1e-09 Score=86.17 Aligned_cols=37 Identities=22% Similarity=0.491 Sum_probs=33.7
Q ss_pred eCC-eeEecCccceeccCCCCCCCCcEEEEEeCCCCChHHHHHHH
Q psy13262 171 IPN-STVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 171 vp~-~~~l~~~~~~~~~~~~~~~~~~~~~ltGpN~~GKStlLk~i 214 (229)
|++ ..+|++++|++++| +.++|+||||||||||+|++
T Consensus 11 Y~~~~~vL~~isl~i~~G-------e~vaivG~sGsGKSTLl~ll 48 (242)
T d1mv5a_ 11 YDDSEQILRDISFEAQPN-------SIIAFAGPSGGGKSTIFSLL 48 (242)
T ss_dssp SSSSSCSEEEEEEEECTT-------EEEEEECCTTSSHHHHHHHH
T ss_pred CCCCCceeeeeEEEEcCC-------CEEEEECCCCCCHHHHHHHH
Confidence 444 46899999999999 99999999999999999998
No 14
>d1l2ta_ c.37.1.12 (A:) MJ0796 {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=98.60 E-value=9.5e-09 Score=84.40 Aligned_cols=33 Identities=24% Similarity=0.546 Sum_probs=31.4
Q ss_pred EecCccceeccCCCCCCCCcEEEEEeCCCCChHHHHHHHH
Q psy13262 176 VIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLG 215 (229)
Q Consensus 176 ~l~~~~~~~~~~~~~~~~~~~~~ltGpN~~GKStlLk~i~ 215 (229)
.+++++|+++.| ++++|.||||||||||||+++
T Consensus 20 al~~isl~i~~G-------e~~~iiG~sGsGKSTLl~~i~ 52 (230)
T d1l2ta_ 20 ALKNVNLNIKEG-------EFVSIMGPSGSGKSTMLNIIG 52 (230)
T ss_dssp EEEEEEEEECTT-------CEEEEECSTTSSHHHHHHHHT
T ss_pred EEeceEEEEcCC-------CEEEEECCCCCCcchhhHhcc
Confidence 689999999999 999999999999999999884
No 15
>d1oxxk2 c.37.1.12 (K:1-242) Glucose transport protein GlcV, N-terminal domain {Archaeon Sulfolobus solfataricus [TaxId: 2287]}
Probab=98.58 E-value=9.7e-09 Score=84.91 Aligned_cols=36 Identities=25% Similarity=0.425 Sum_probs=33.1
Q ss_pred eeEecCccceeccCCCCCCCCcEEEEEeCCCCChHHHHHHHHH
Q psy13262 174 STVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLGL 216 (229)
Q Consensus 174 ~~~l~~~~~~~~~~~~~~~~~~~~~ltGpN~~GKStlLk~i~l 216 (229)
-..+++++|++++| ++++|.||||||||||||+++.
T Consensus 18 ~~aL~~vsl~i~~G-------e~~~iiG~sGsGKSTll~~i~g 53 (242)
T d1oxxk2 18 VVALDNVNINIENG-------ERFGILGPSGAGKTTFMRIIAG 53 (242)
T ss_dssp EEEEEEEEEEECTT-------CEEEEECSCHHHHHHHHHHHHT
T ss_pred EEEEeceEEEECCC-------CEEEEECCCCCcHHHHHHHHHc
Confidence 35799999999999 9999999999999999999853
No 16
>d1jj7a_ c.37.1.12 (A:) Peptide transporter Tap1, C-terminal ABC domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=98.56 E-value=1.5e-08 Score=84.24 Aligned_cols=47 Identities=32% Similarity=0.376 Sum_probs=38.9
Q ss_pred eEEeccccCcccCCCceeeCCe---eEecCccceeccCCCCCCCCcEEEEEeCCCCChHHHHHHH
Q psy13262 153 YISALESLYPCATGDQTYIPNS---TVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 153 ~i~~~~~~hpll~~~~~~vp~~---~~l~~~~~~~~~~~~~~~~~~~~~ltGpN~~GKStlLk~i 214 (229)
-|+++++ .-.||+. ..|++++|++++| +.++|+||||||||||+|++
T Consensus 11 ~I~~~nv--------sf~Y~~~~~~~vL~~isl~i~~G-------e~vaivG~sGsGKSTLl~li 60 (251)
T d1jj7a_ 11 LVQFQDV--------SFAYPNRPDVLVLQGLTFTLRPG-------EVTALVGPNGSGKSTVAALL 60 (251)
T ss_dssp CEEEEEE--------EECCTTSTTCCSEEEEEEEECTT-------CEEEEECSTTSSHHHHHHHH
T ss_pred eEEEEEE--------EEECCCCCCCEeEeceEEEEcCC-------CEEEEECCCCCcHHHHHHHH
Confidence 3777766 2234542 4799999999999 99999999999999999988
No 17
>d2pmka1 c.37.1.12 (A:467-707) Haemolysin B ATP-binding protein {Escherichia coli [TaxId: 562]}
Probab=98.51 E-value=2.5e-08 Score=82.34 Aligned_cols=34 Identities=21% Similarity=0.421 Sum_probs=32.1
Q ss_pred eeEecCccceeccCCCCCCCCcEEEEEeCCCCChHHHHHHH
Q psy13262 174 STVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 174 ~~~l~~~~~~~~~~~~~~~~~~~~~ltGpN~~GKStlLk~i 214 (229)
...|++++|++++| +.++|+||||||||||+|++
T Consensus 16 ~~vL~~isl~i~~G-------e~vaIvG~sGsGKSTLl~ll 49 (241)
T d2pmka1 16 PVILDNINLSIKQG-------EVIGIVGRSGSGKSTLTKLI 49 (241)
T ss_dssp CEEEEEEEEEEETT-------CEEEEECSTTSSHHHHHHHH
T ss_pred cceEeeeEEEEcCC-------CEEEEECCCCCCHHHHHHHH
Confidence 35899999999999 99999999999999999998
No 18
>d1r0wa_ c.37.1.12 (A:) Cystic fibrosis transmembrane conductance regulator, CFTR, nucleotide-binding domain {Mouse (Mus musculus) [TaxId: 10090]}
Probab=98.50 E-value=3e-08 Score=83.63 Aligned_cols=36 Identities=22% Similarity=0.449 Sum_probs=33.7
Q ss_pred CCeeEecCccceeccCCCCCCCCcEEEEEeCCCCChHHHHHHH
Q psy13262 172 PNSTVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 172 p~~~~l~~~~~~~~~~~~~~~~~~~~~ltGpN~~GKStlLk~i 214 (229)
..+.+|++++|++++| ++++|+||||+|||||||++
T Consensus 47 ~g~pvL~~isl~i~~G-------e~vaivG~nGsGKSTLl~~i 82 (281)
T d1r0wa_ 47 VGNPVLKNINLNIEKG-------EMLAITGSTGSGKTSLLMLI 82 (281)
T ss_dssp TTCEEEEEEEEEECTT-------CEEEEEESTTSSHHHHHHHH
T ss_pred CCCeEEeCeEEEEcCC-------CEEEEECCCCChHHHHHHHH
Confidence 4567999999999999 99999999999999999988
No 19
>d1l7vc_ c.37.1.12 (C:) ABC transporter involved in vitamin B12 uptake, BtuD {Escherichia coli [TaxId: 562]}
Probab=98.43 E-value=2.9e-08 Score=81.41 Aligned_cols=34 Identities=38% Similarity=0.671 Sum_probs=31.6
Q ss_pred eEecCccceeccCCCCCCCCcEEEEEeCCCCChHHHHHHHH
Q psy13262 175 TVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQLG 215 (229)
Q Consensus 175 ~~l~~~~~~~~~~~~~~~~~~~~~ltGpN~~GKStlLk~i~ 215 (229)
+.++++||++++| ++++|.||||+|||||||++.
T Consensus 13 ~~l~~isl~I~~G-------ei~~iiG~nGaGKSTLl~~l~ 46 (231)
T d1l7vc_ 13 TRLGPLSGEVRAG-------EILHLVGPNGAGKSTLLARMA 46 (231)
T ss_dssp TTSCSEEEEEETT-------CEEECBCCTTSSHHHHHHHHH
T ss_pred ceecCEEEEEcCC-------CEEEEECCCCCcHHHHHHHHh
Confidence 4688999999999 999999999999999999884
No 20
>d3b60a1 c.37.1.12 (A:329-581) Multidrug resistance ABC transporter MsbA, C-terminal domain {Salmonella typhimurium [TaxId: 90371]}
Probab=98.43 E-value=5.6e-08 Score=80.75 Aligned_cols=33 Identities=21% Similarity=0.366 Sum_probs=31.6
Q ss_pred eEecCccceeccCCCCCCCCcEEEEEeCCCCChHHHHHHH
Q psy13262 175 TVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 175 ~~l~~~~~~~~~~~~~~~~~~~~~ltGpN~~GKStlLk~i 214 (229)
..|++++|++++| ++++|+||||||||||+|++
T Consensus 29 ~~L~~isl~i~~G-------e~iaivG~sGsGKSTLl~ll 61 (253)
T d3b60a1 29 PALRNINLKIPAG-------KTVALVGRSGSGKSTIASLI 61 (253)
T ss_dssp CSEEEEEEEECTT-------CEEEEEECTTSSHHHHHHHH
T ss_pred ceeeceEEEEcCC-------CEEEEECCCCChHHHHHHHH
Confidence 4799999999999 99999999999999999988
No 21
>d2hyda1 c.37.1.12 (A:324-578) Putative multidrug export ATP-binding/permease protein SAV1866 {Staphylococcus aureus [TaxId: 1280]}
Probab=98.38 E-value=5.6e-08 Score=80.84 Aligned_cols=46 Identities=20% Similarity=0.317 Sum_probs=37.9
Q ss_pred EEeccccCcccCCCceeeCC--eeEecCccceeccCCCCCCCCcEEEEEeCCCCChHHHHHHH
Q psy13262 154 ISALESLYPCATGDQTYIPN--STVIGRCKEDVESGGEGNRKPTVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 154 i~~~~~~hpll~~~~~~vp~--~~~l~~~~~~~~~~~~~~~~~~~~~ltGpN~~GKStlLk~i 214 (229)
|+++++ .-.||+ ...|++++|++++| +.++|+||||||||||||++
T Consensus 17 I~~~nv--------sf~Y~~~~~~vL~~isl~i~~G-------e~vaivG~sGsGKSTLl~ll 64 (255)
T d2hyda1 17 IDIDHV--------SFQYNDNEAPILKDINLSIEKG-------ETVAFVGMSGGGKSTLINLI 64 (255)
T ss_dssp EEEEEE--------EECSCSSSCCSEEEEEEEECTT-------CEEEEECSTTSSHHHHHTTT
T ss_pred EEEEEE--------EEEeCCCCCcceeceEEEEcCC-------CEEEEECCCCCcHHHHHHHH
Confidence 677665 222444 35899999999999 99999999999999999987
No 22
>g1xew.1 c.37.1.12 (X:,Y:) Smc head domain {Pyrococcus furiosus [TaxId: 2261]}
Probab=97.43 E-value=4.3e-05 Score=63.67 Aligned_cols=23 Identities=22% Similarity=0.320 Sum_probs=21.0
Q ss_pred cEEEEEeCCCCChHHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLI 217 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~ 217 (229)
.+.+|+||||+||||+|..|+++
T Consensus 27 ~lnvi~G~NGsGKS~il~AI~~~ 49 (329)
T g1xew.1 27 GFTAIVGANGSGKSNIGDAILFV 49 (329)
T ss_dssp SEEEEEECTTSSSHHHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHHH
Confidence 58999999999999999999764
No 23
>d1w1wa_ c.37.1.12 (A:) Smc head domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.96 E-value=0.00023 Score=60.58 Aligned_cols=23 Identities=30% Similarity=0.587 Sum_probs=20.9
Q ss_pred cEEEEEeCCCCChHHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLI 217 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~ 217 (229)
...+|+||||+|||++|..|.++
T Consensus 26 ~l~~i~G~NGsGKS~ileAi~~~ 48 (427)
T d1w1wa_ 26 NFTSIIGPNGSGKSNMMDAISFV 48 (427)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHH
T ss_pred CEEEEECCCCCCHHHHHHHHHHH
Confidence 68999999999999999999764
No 24
>d1sxja2 c.37.1.20 (A:295-547) Replication factor C1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.40 E-value=0.0011 Score=52.66 Aligned_cols=23 Identities=26% Similarity=0.263 Sum_probs=20.5
Q ss_pred CcEEEEEeCCCCChHHHHHHHHH
Q psy13262 194 PTVLLLTGPNMGGKSTVMRQLGL 216 (229)
Q Consensus 194 ~~~~~ltGpN~~GKStlLk~i~l 216 (229)
...++|+||.|+||||+.+.++-
T Consensus 52 ~~~lll~GPpG~GKTt~a~~la~ 74 (253)
T d1sxja2 52 FRAAMLYGPPGIGKTTAAHLVAQ 74 (253)
T ss_dssp CSEEEEECSTTSSHHHHHHHHHH
T ss_pred CceEEEECCCCCCHHHHHHHHHH
Confidence 47899999999999999998763
No 25
>d1iqpa2 c.37.1.20 (A:2-232) Replication factor C {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=96.32 E-value=0.00095 Score=52.59 Aligned_cols=23 Identities=35% Similarity=0.376 Sum_probs=20.2
Q ss_pred CcEEEEEeCCCCChHHHHHHHHH
Q psy13262 194 PTVLLLTGPNMGGKSTVMRQLGL 216 (229)
Q Consensus 194 ~~~~~ltGpN~~GKStlLk~i~l 216 (229)
...++|+||+|+||||+.|.++=
T Consensus 45 ~~~lll~Gp~G~GKTtla~~iak 67 (231)
T d1iqpa2 45 MPHLLFAGPPGVGKTTAALALAR 67 (231)
T ss_dssp CCEEEEESCTTSSHHHHHHHHHH
T ss_pred CCeEEEECCCCCcHHHHHHHHHH
Confidence 36799999999999999998854
No 26
>d1sxjd2 c.37.1.20 (D:26-262) Replication factor C2 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=96.14 E-value=0.0014 Score=51.35 Aligned_cols=22 Identities=27% Similarity=0.416 Sum_probs=19.7
Q ss_pred cEEEEEeCCCCChHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGL 216 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l 216 (229)
..++|+||+|+||||+.|.++-
T Consensus 34 ~~lll~Gp~G~GKTtl~~~i~~ 55 (237)
T d1sxjd2 34 PHMLFYGPPGTGKTSTILALTK 55 (237)
T ss_dssp CCEEEECSTTSSHHHHHHHHHH
T ss_pred CeEEEECCCCCChHHHHHHHHH
Confidence 4589999999999999999864
No 27
>d1gvnb_ c.37.1.21 (B:) Plasmid maintenance system epsilon/zeta, toxin zeta subunit {Streptococcus pyogenes [TaxId: 1314]}
Probab=96.06 E-value=0.002 Score=51.27 Aligned_cols=23 Identities=30% Similarity=0.418 Sum_probs=20.2
Q ss_pred CcEEEEEeCCCCChHHHHHHHHH
Q psy13262 194 PTVLLLTGPNMGGKSTVMRQLGL 216 (229)
Q Consensus 194 ~~~~~ltGpN~~GKStlLk~i~l 216 (229)
+..++|.||.|+||||+.+.++-
T Consensus 32 P~~ilL~GpPGtGKT~la~~la~ 54 (273)
T d1gvnb_ 32 PTAFLLGGQPGSGKTSLRSAIFE 54 (273)
T ss_dssp CEEEEEECCTTSCTHHHHHHHHH
T ss_pred CEEEEEECCCCCCHHHHHHHHHH
Confidence 46799999999999999998754
No 28
>d1cr2a_ c.37.1.11 (A:) Gene 4 protein (g4p, DNA primase), helicase domain {Bacteriophage T7 [TaxId: 10760]}
Probab=95.91 E-value=0.0029 Score=50.96 Aligned_cols=33 Identities=30% Similarity=0.211 Sum_probs=27.3
Q ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHhcCCCcc
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLITILAQMENPQL 228 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~~~ma~~G~~v~ 228 (229)
+.++|.|+.|+|||+|+-.+++... .+.|.||+
T Consensus 36 ~l~vi~G~~G~GKT~~~~~la~~~a-~~~g~~v~ 68 (277)
T d1cr2a_ 36 EVIMVTSGSGMGKSTFVRQQALQWG-TAMGKKVG 68 (277)
T ss_dssp CEEEEECSTTSSHHHHHHHHHHHHH-HTSCCCEE
T ss_pred eEEEEEeCCCCCHHHHHHHHHHhhh-hhccccee
Confidence 8999999999999999998876543 35588875
No 29
>d1in4a2 c.37.1.20 (A:17-254) Holliday junction helicase RuvB {Thermotoga maritima [TaxId: 2336]}
Probab=95.90 E-value=0.0021 Score=50.70 Aligned_cols=21 Identities=33% Similarity=0.488 Sum_probs=19.1
Q ss_pred cEEEEEeCCCCChHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLG 215 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~ 215 (229)
..++++||.|+||||+.|.++
T Consensus 36 ~~~L~~GPpGtGKT~lA~~la 56 (238)
T d1in4a2 36 DHVLLAGPPGLGKTTLAHIIA 56 (238)
T ss_dssp CCEEEESSTTSSHHHHHHHHH
T ss_pred CeEEEECCCCCcHHHHHHHHH
Confidence 579999999999999999875
No 30
>d1sxje2 c.37.1.20 (E:4-255) Replication factor C5 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.65 E-value=0.0025 Score=50.35 Aligned_cols=22 Identities=45% Similarity=0.395 Sum_probs=19.5
Q ss_pred cEEEEEeCCCCChHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGL 216 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l 216 (229)
..++|+||.|+||||+.+.++-
T Consensus 34 ~~lll~Gp~G~GKTt~~~~la~ 55 (252)
T d1sxje2 34 PHLLLYGPNGTGKKTRCMALLE 55 (252)
T ss_dssp CCEEEECSTTSSHHHHHHTHHH
T ss_pred CeEEEECCCCCCHHHHHHHHHH
Confidence 4689999999999999998764
No 31
>d1sxjc2 c.37.1.20 (C:12-238) Replication factor C3 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.64 E-value=0.00099 Score=52.28 Aligned_cols=22 Identities=32% Similarity=0.460 Sum_probs=19.4
Q ss_pred cEEEEEeCCCCChHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGL 216 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l 216 (229)
..++|+||.|+||||+.+.++-
T Consensus 36 ~~lLl~Gp~G~GKttl~~~la~ 57 (227)
T d1sxjc2 36 PHLLFYGPPGTGKTSTIVALAR 57 (227)
T ss_dssp CCEEEECSSSSSHHHHHHHHHH
T ss_pred CeEEEECCCCCChhHHHHHHHH
Confidence 4588999999999999998864
No 32
>d2p67a1 c.37.1.10 (A:1-327) LAO/AO transport system kinase ArgK {Escherichia coli [TaxId: 562]}
Probab=95.62 E-value=0.0037 Score=52.69 Aligned_cols=23 Identities=35% Similarity=0.472 Sum_probs=20.5
Q ss_pred CcEEEEEeCCCCChHHHHHHHHH
Q psy13262 194 PTVLLLTGPNMGGKSTVMRQLGL 216 (229)
Q Consensus 194 ~~~~~ltGpN~~GKStlLk~i~l 216 (229)
..+++||||.|+|||||+..++.
T Consensus 54 ~~~IgitG~pGaGKSTLi~~l~~ 76 (327)
T d2p67a1 54 TLRLGVTGTPGAGKSTFLEAFGM 76 (327)
T ss_dssp SEEEEEEECTTSCHHHHHHHHHH
T ss_pred ceEEEeeCCCCCCHHHHHHHHHH
Confidence 47999999999999999998753
No 33
>d1fnna2 c.37.1.20 (A:1-276) CDC6, N-domain {Archaeon Pyrobaculum aerophilum [TaxId: 13773]}
Probab=95.54 E-value=0.0045 Score=48.73 Aligned_cols=24 Identities=25% Similarity=0.189 Sum_probs=20.9
Q ss_pred CCcEEEEEeCCCCChHHHHHHHHH
Q psy13262 193 KPTVLLLTGPNMGGKSTVMRQLGL 216 (229)
Q Consensus 193 ~~~~~~ltGpN~~GKStlLk~i~l 216 (229)
....++|+||.|.|||+++|.++-
T Consensus 42 ~~~~lll~GppGtGKT~l~~~l~~ 65 (276)
T d1fnna2 42 HYPRATLLGRPGTGKTVTLRKLWE 65 (276)
T ss_dssp SCCEEEEECCTTSSHHHHHHHHHH
T ss_pred CCCceEEECCCCCCHHHHHHHHHH
Confidence 347999999999999999998753
No 34
>d1ixsb2 c.37.1.20 (B:4-242) Holliday junction helicase RuvB {Thermus thermophilus [TaxId: 274]}
Probab=95.49 E-value=0.0038 Score=49.20 Aligned_cols=23 Identities=35% Similarity=0.381 Sum_probs=20.2
Q ss_pred CcEEEEEeCCCCChHHHHHHHHH
Q psy13262 194 PTVLLLTGPNMGGKSTVMRQLGL 216 (229)
Q Consensus 194 ~~~~~ltGpN~~GKStlLk~i~l 216 (229)
...++++||.|.||||+.|.++-
T Consensus 35 ~~~~Ll~GPpG~GKTtla~~la~ 57 (239)
T d1ixsb2 35 LEHLLLFGPPGLGKTTLAHVIAH 57 (239)
T ss_dssp CCCEEEECCTTSCHHHHHHHHHH
T ss_pred CCeEEEECCCCCCHHHHHHHHHH
Confidence 46789999999999999998863
No 35
>d1sxjb2 c.37.1.20 (B:7-230) Replication factor C4 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=95.47 E-value=0.0039 Score=48.77 Aligned_cols=22 Identities=23% Similarity=0.282 Sum_probs=19.3
Q ss_pred cEEEEEeCCCCChHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGL 216 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l 216 (229)
..++|+||.|+||||+.+.++-
T Consensus 37 ~~~ll~Gp~G~GKTt~a~~la~ 58 (224)
T d1sxjb2 37 PHMIISGMPGIGKTTSVHCLAH 58 (224)
T ss_dssp CCEEEECSTTSSHHHHHHHHHH
T ss_pred CeEEEECCCCCCchhhHHHHHH
Confidence 4689999999999999998853
No 36
>d1p9ra_ c.37.1.11 (A:) Extracellular secretion NTPase EpsE {Vibrio cholerae [TaxId: 666]}
Probab=95.26 E-value=0.0052 Score=53.02 Aligned_cols=21 Identities=38% Similarity=0.548 Sum_probs=19.1
Q ss_pred CcEEEEEeCCCCChHHHHHHH
Q psy13262 194 PTVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 194 ~~~~~ltGpN~~GKStlLk~i 214 (229)
...++|+||.||||||+|..+
T Consensus 158 ~GliLvtGpTGSGKSTTl~~~ 178 (401)
T d1p9ra_ 158 HGIILVTGPTGSGKSTTLYAG 178 (401)
T ss_dssp SEEEEEECSTTSCHHHHHHHH
T ss_pred hceEEEEcCCCCCccHHHHHH
Confidence 379999999999999999876
No 37
>d1ixza_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Thermus thermophilus [TaxId: 274]}
Probab=95.22 E-value=0.0085 Score=48.21 Aligned_cols=28 Identities=29% Similarity=0.380 Sum_probs=23.7
Q ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHhcCCCc
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLITILAQMENPQ 227 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~~~ma~~G~~v 227 (229)
+.++++||.|+|||++.|.++- .+|+|+
T Consensus 43 ~giLl~GppGtGKT~la~aia~-----~~~~~~ 70 (247)
T d1ixza_ 43 KGVLLVGPPGVGKTHLARAVAG-----EARVPF 70 (247)
T ss_dssp SEEEEECCTTSSHHHHHHHHHH-----HTTCCE
T ss_pred ceEEEecCCCCChhHHHHHHHH-----HcCCCE
Confidence 6799999999999999999983 456664
No 38
>d2fnaa2 c.37.1.20 (A:1-283) Archaeal ATPase SSO1545 {Sulfolobus solfataricus [TaxId: 2287]}
Probab=95.15 E-value=0.0064 Score=47.80 Aligned_cols=21 Identities=24% Similarity=0.306 Sum_probs=19.3
Q ss_pred cEEEEEeCCCCChHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLG 215 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~ 215 (229)
++++|+||-|+|||++++.++
T Consensus 30 ~~i~i~G~~G~GKTsLl~~~~ 50 (283)
T d2fnaa2 30 PITLVLGLRRTGKSSIIKIGI 50 (283)
T ss_dssp SEEEEEESTTSSHHHHHHHHH
T ss_pred CEEEEEcCCCCcHHHHHHHHH
Confidence 799999999999999999764
No 39
>d1g6oa_ c.37.1.11 (A:) Hexameric traffic ATPase, HP0525 {Helicobacter pylori [TaxId: 210]}
Probab=95.03 E-value=0.0041 Score=52.28 Aligned_cols=20 Identities=20% Similarity=0.453 Sum_probs=18.1
Q ss_pred cEEEEEeCCCCChHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i 214 (229)
..++|+||.|+||||+|+.+
T Consensus 167 ~nili~G~tgSGKTT~l~al 186 (323)
T d1g6oa_ 167 KNVIVCGGTGSGKTTYIKSI 186 (323)
T ss_dssp CCEEEEESTTSSHHHHHHHH
T ss_pred CCEEEEeeccccchHHHHHH
Confidence 56899999999999999876
No 40
>d1tf7a1 c.37.1.11 (A:14-255) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=94.85 E-value=0.014 Score=44.75 Aligned_cols=26 Identities=23% Similarity=0.224 Sum_probs=21.8
Q ss_pred cEEEEEeCCCCChHHHHHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLITIL 220 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~~~m 220 (229)
+.+.|.|++|+|||+|.-+++...+.
T Consensus 27 ~~~~I~G~~G~GKT~la~~~~~~~~~ 52 (242)
T d1tf7a1 27 RSTLVSGTSGTGKTLFSIQFLYNGII 52 (242)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHHH
Confidence 99999999999999998777654443
No 41
>d1lv7a_ c.37.1.20 (A:) AAA domain of cell division protein FtsH {Escherichia coli [TaxId: 562]}
Probab=94.78 E-value=0.0096 Score=48.20 Aligned_cols=21 Identities=24% Similarity=0.493 Sum_probs=19.7
Q ss_pred cEEEEEeCCCCChHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLG 215 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~ 215 (229)
+.++|+||.|+|||++.|.++
T Consensus 46 ~~iLL~GppGtGKT~la~~iA 66 (256)
T d1lv7a_ 46 KGVLMVGPPGTGKTLLAKAIA 66 (256)
T ss_dssp CEEEEECCTTSCHHHHHHHHH
T ss_pred CeEEeeCCCCCCccHHHHHHH
Confidence 789999999999999999886
No 42
>d2qm8a1 c.37.1.10 (A:5-327) Metallochaperone MeaB {Methylobacterium extorquens [TaxId: 408]}
Probab=94.61 E-value=0.011 Score=49.59 Aligned_cols=23 Identities=35% Similarity=0.328 Sum_probs=20.4
Q ss_pred CcEEEEEeCCCCChHHHHHHHHH
Q psy13262 194 PTVLLLTGPNMGGKSTVMRQLGL 216 (229)
Q Consensus 194 ~~~~~ltGpN~~GKStlLk~i~l 216 (229)
..+++||||.|+|||||+-.++.
T Consensus 51 ~~~igitG~pGaGKSTli~~l~~ 73 (323)
T d2qm8a1 51 AIRVGITGVPGVGKSTTIDALGS 73 (323)
T ss_dssp SEEEEEECCTTSCHHHHHHHHHH
T ss_pred ceEEeeeCCCCCCHHHHHHHHHH
Confidence 37899999999999999998764
No 43
>d1tf7a2 c.37.1.11 (A:256-497) Circadian clock protein KaiC {Synechococcus sp. strain PCC 7942 (Anacystis nidulans R2) [TaxId: 1140]}
Probab=94.52 E-value=0.017 Score=45.10 Aligned_cols=24 Identities=21% Similarity=0.333 Sum_probs=21.6
Q ss_pred cEEEEEeCCCCChHHHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLIT 218 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~~ 218 (229)
..++|.||.|+|||+++.+++...
T Consensus 27 sl~li~G~pGsGKT~l~~qia~~~ 50 (242)
T d1tf7a2 27 SIILATGATGTGKTLLVSRFVENA 50 (242)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHH
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHH
Confidence 899999999999999998886653
No 44
>d1d2na_ c.37.1.20 (A:) Hexamerization domain of N-ethylmalemide-sensitive fusion (NSF) protein {Chinese hamster (Cricetulus griseus) [TaxId: 10029]}
Probab=94.47 E-value=0.011 Score=47.48 Aligned_cols=22 Identities=27% Similarity=0.539 Sum_probs=20.0
Q ss_pred cEEEEEeCCCCChHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGL 216 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l 216 (229)
+.++|.||.|+|||++.|.++-
T Consensus 41 ~~vLL~GppGtGKT~la~alA~ 62 (246)
T d1d2na_ 41 VSVLLEGPPHSGKTALAAKIAE 62 (246)
T ss_dssp EEEEEECSTTSSHHHHHHHHHH
T ss_pred eEEEEECcCCCCHHHHHHHHhh
Confidence 6799999999999999999864
No 45
>d1e32a2 c.37.1.20 (A:201-458) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=94.41 E-value=0.015 Score=46.82 Aligned_cols=22 Identities=32% Similarity=0.460 Sum_probs=19.7
Q ss_pred cEEEEEeCCCCChHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGL 216 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l 216 (229)
+.++|.||.|+|||++.|.++-
T Consensus 39 ~giLL~GppGtGKT~l~~ala~ 60 (258)
T d1e32a2 39 RGILLYGPPGTGKTLIARAVAN 60 (258)
T ss_dssp CEEEEECCTTSSHHHHHHHHHH
T ss_pred ceeEEecCCCCCchHHHHHHHH
Confidence 6799999999999999997754
No 46
>d2i1qa2 c.37.1.11 (A:65-322) DNA repair protein Rad51, catalytic domain {Archaeon Methanococcus voltae [TaxId: 2188]}
Probab=94.05 E-value=0.016 Score=44.61 Aligned_cols=25 Identities=24% Similarity=0.211 Sum_probs=22.4
Q ss_pred cEEEEEeCCCCChHHHHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLITI 219 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~~~ 219 (229)
++++|+|+.|+|||+|.-.++...+
T Consensus 35 ~l~~i~G~~G~GKT~~~l~~a~~~~ 59 (258)
T d2i1qa2 35 SVTEFAGVFGSGKTQIMHQSCVNLQ 59 (258)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHHTT
T ss_pred eEEEEEeCCCCCHHHHHHHHHHHHH
Confidence 8999999999999999988877653
No 47
>d1szpa2 c.37.1.11 (A:145-395) DNA repair protein Rad51, catalytic domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=93.98 E-value=0.016 Score=44.72 Aligned_cols=23 Identities=26% Similarity=0.316 Sum_probs=20.2
Q ss_pred cEEEEEeCCCCChHHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLI 217 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~ 217 (229)
+.+.|+||.|+||||+.-+++..
T Consensus 35 ~~~li~G~pGsGKT~l~lq~~~~ 57 (251)
T d1szpa2 35 SITELFGEFRTGKSQLCHTLAVT 57 (251)
T ss_dssp SEEEEEESTTSSHHHHHHHHTTT
T ss_pred eEEEEEcCCCCCHHHHHHHHHHH
Confidence 89999999999999998877543
No 48
>d1r7ra3 c.37.1.20 (A:471-735) Membrane fusion ATPase VCP/p97 {Mouse (Mus musculus) [TaxId: 10090]}
Probab=93.89 E-value=0.018 Score=46.54 Aligned_cols=22 Identities=23% Similarity=0.371 Sum_probs=19.8
Q ss_pred cEEEEEeCCCCChHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGL 216 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l 216 (229)
+.++|.||.|+|||++.+.++-
T Consensus 42 ~giLL~Gp~GtGKT~l~~ala~ 63 (265)
T d1r7ra3 42 KGVLFYGPPGCGKTLLAKAIAN 63 (265)
T ss_dssp CEEEEBCCTTSSHHHHHHHHHH
T ss_pred CeEEEECCCCCcchhHHHHHHH
Confidence 6899999999999999999853
No 49
>d1u0la2 c.37.1.8 (A:69-293) Probable GTPase EngC (YjeQ), C-terminal domain {Thermotoga maritima [TaxId: 2336]}
Probab=93.62 E-value=0.021 Score=45.41 Aligned_cols=20 Identities=20% Similarity=0.378 Sum_probs=18.8
Q ss_pred cEEEEEeCCCCChHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i 214 (229)
+..+++|+.|.|||||++.+
T Consensus 96 kt~~~~G~SGVGKSTLiN~L 115 (225)
T d1u0la2 96 KISTMAGLSGVGKSSLLNAI 115 (225)
T ss_dssp SEEEEECSTTSSHHHHHHHH
T ss_pred CeEEEECCCCCCHHHHHHhh
Confidence 78999999999999999976
No 50
>d1pzna2 c.37.1.11 (A:96-349) DNA repair protein Rad51, catalytic domain {Archaeon Pyrococcus furiosus [TaxId: 2261]}
Probab=93.36 E-value=0.028 Score=43.68 Aligned_cols=23 Identities=17% Similarity=0.304 Sum_probs=19.8
Q ss_pred cEEEEEeCCCCChHHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLI 217 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~ 217 (229)
+.++|+||.|+|||||.-+++-.
T Consensus 37 ~~~li~G~pGsGKT~~~lq~~~~ 59 (254)
T d1pzna2 37 AITEVFGEFGSGKTQLAHTLAVM 59 (254)
T ss_dssp EEEEEEESTTSSHHHHHHHHHHH
T ss_pred EEEEEEcCCCCCHHHHHHHHHHH
Confidence 89999999999999998666443
No 51
>d1v5wa_ c.37.1.11 (A:) Meiotic recombination protein DMC1/LIM15 homolog {Human (Homo sapiens) [TaxId: 9606]}
Probab=93.28 E-value=0.029 Score=43.45 Aligned_cols=24 Identities=17% Similarity=0.176 Sum_probs=20.9
Q ss_pred cEEEEEeCCCCChHHHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLIT 218 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~~ 218 (229)
+.+.|+||.|+|||++.-+++..+
T Consensus 38 ~~~~i~G~~GsGKT~lalq~~~~~ 61 (258)
T d1v5wa_ 38 AITEAFGEFRTGKTQLSHTLCVTA 61 (258)
T ss_dssp EEEEEECCTTCTHHHHHHHHHHHT
T ss_pred EEEEEECCCCCCHHHHHHHHHHHH
Confidence 899999999999999988776544
No 52
>d1w5sa2 c.37.1.20 (A:7-293) CDC6-like protein APE0152, N-terminal domain {Aeropyrum pernix [TaxId: 56636]}
Probab=93.16 E-value=0.014 Score=45.94 Aligned_cols=20 Identities=20% Similarity=0.034 Sum_probs=17.7
Q ss_pred EEEEEeCCCCChHHHHHHHH
Q psy13262 196 VLLLTGPNMGGKSTVMRQLG 215 (229)
Q Consensus 196 ~~~ltGpN~~GKStlLk~i~ 215 (229)
++.|+||.|.|||+++|.++
T Consensus 48 ~l~l~GppGtGKT~l~~~l~ 67 (287)
T d1w5sa2 48 IYGSIGRVGIGKTTLAKFTV 67 (287)
T ss_dssp EEECTTCCSSSHHHHHHHHH
T ss_pred EEEeECCCCCCHHHHHHHHH
Confidence 56678999999999999885
No 53
>d1ofha_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=93.12 E-value=0.024 Score=46.81 Aligned_cols=22 Identities=32% Similarity=0.561 Sum_probs=19.6
Q ss_pred cEEEEEeCCCCChHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGL 216 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l 216 (229)
+.+++.||.|+|||.+.|+++-
T Consensus 50 ~~iLl~GPpG~GKT~lAkalA~ 71 (309)
T d1ofha_ 50 KNILMIGPTGVGKTEIARRLAK 71 (309)
T ss_dssp CCEEEECCTTSSHHHHHHHHHH
T ss_pred ceEEEECCCCCCHHHHHHHHhh
Confidence 5778999999999999998864
No 54
>d1njfa_ c.37.1.20 (A:) delta prime subunit of DNA polymerase III, N-domain {Escherichia coli [TaxId: 562]}
Probab=92.91 E-value=0.036 Score=43.56 Aligned_cols=22 Identities=27% Similarity=0.443 Sum_probs=18.9
Q ss_pred CcEEEEEeCCCCChHHHHHHHH
Q psy13262 194 PTVLLLTGPNMGGKSTVMRQLG 215 (229)
Q Consensus 194 ~~~~~ltGpN~~GKStlLk~i~ 215 (229)
...++|+||+|.||||+.+.++
T Consensus 34 ~~~~Ll~Gp~G~GKtt~a~~~~ 55 (239)
T d1njfa_ 34 HHAYLFSGTRGVGKTSIARLLA 55 (239)
T ss_dssp CSEEEEECSTTSSHHHHHHHHH
T ss_pred CeeEEEECCCCCcHHHHHHHHH
Confidence 3578999999999999988764
No 55
>d1sq5a_ c.37.1.6 (A:) Pantothenate kinase PanK {Escherichia coli [TaxId: 562]}
Probab=92.86 E-value=0.035 Score=46.04 Aligned_cols=21 Identities=33% Similarity=0.415 Sum_probs=18.9
Q ss_pred cEEEEEeCCCCChHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLG 215 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~ 215 (229)
-+++|.|+.|+||||+-+.+.
T Consensus 81 ~iIGIaG~sgSGKSTla~~L~ 101 (308)
T d1sq5a_ 81 YIISIAGSVAVGKSTTARVLQ 101 (308)
T ss_dssp EEEEEEECTTSSHHHHHHHHH
T ss_pred EEEEEeCCCCCCCcHHHHHHH
Confidence 689999999999999988774
No 56
>d1e9ra_ c.37.1.11 (A:) Bacterial conjugative coupling protein TrwB {Escherichia coli [TaxId: 562]}
Probab=92.71 E-value=0.031 Score=47.43 Aligned_cols=32 Identities=28% Similarity=0.369 Sum_probs=23.8
Q ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHhcCCCcc
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLITILAQMENPQL 228 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~~~ma~~G~~v~ 228 (229)
+++.|+|+.|+|||++|+.+... ++ ..|.++.
T Consensus 51 ~H~~I~G~tGsGKT~~l~~li~~-~~-~~g~~~i 82 (433)
T d1e9ra_ 51 RHLLVNGATGTGKSVLLRELAYT-GL-LRGDRMV 82 (433)
T ss_dssp GCEEEEECTTSSHHHHHHHHHHH-HH-HTTCEEE
T ss_pred ceEEEEeCCCCcHHHHHHHHHHH-HH-hCCCCEE
Confidence 78999999999999999876433 23 3465553
No 57
>d1odfa_ c.37.1.6 (A:) Hypothetical protein Ygr205W {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=92.55 E-value=0.043 Score=45.06 Aligned_cols=21 Identities=33% Similarity=0.604 Sum_probs=18.2
Q ss_pred CcEEEEEeCCCCChHHHHHHH
Q psy13262 194 PTVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 194 ~~~~~ltGpN~~GKStlLk~i 214 (229)
+-+++|.|+-||||||+-+.+
T Consensus 27 P~iIGi~G~qGSGKSTl~~~l 47 (286)
T d1odfa_ 27 PLFIFFSGPQGSGKSFTSIQI 47 (286)
T ss_dssp CEEEEEECCTTSSHHHHHHHH
T ss_pred CEEEEeECCCCCCHHHHHHHH
Confidence 357889999999999998766
No 58
>d1nlfa_ c.37.1.11 (A:) Hexameric replicative helicase repA {Escherichia coli [TaxId: 562]}
Probab=92.52 E-value=0.081 Score=41.75 Aligned_cols=23 Identities=39% Similarity=0.351 Sum_probs=21.0
Q ss_pred cEEEEEeCCCCChHHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLI 217 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~ 217 (229)
+..+|+|+.|.|||||+-.+++.
T Consensus 30 ~~~~i~G~~G~GKS~l~l~la~~ 52 (274)
T d1nlfa_ 30 TVGALVSPGGAGKSMLALQLAAQ 52 (274)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHH
T ss_pred cEEEEEeCCCCCHHHHHHHHHHH
Confidence 79999999999999999888764
No 59
>d1h65a_ c.37.1.8 (A:) Chloroplast protein translocon GTPase Toc34 {Garden pea (Pisum sativum) [TaxId: 3888]}
Probab=91.76 E-value=0.049 Score=43.58 Aligned_cols=20 Identities=25% Similarity=0.413 Sum_probs=18.5
Q ss_pred cEEEEEeCCCCChHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i 214 (229)
-.++|.|..|+||||+++++
T Consensus 33 l~I~LvG~tg~GKSSliN~i 52 (257)
T d1h65a_ 33 LTILVMGKGGVGKSSTVNSI 52 (257)
T ss_dssp EEEEEEESTTSSHHHHHHHH
T ss_pred cEEEEECCCCCcHHHHHHHH
Confidence 57899999999999999987
No 60
>d1t9ha2 c.37.1.8 (A:68-298) Probable GTPase EngC (YjeQ), C-terminal domain {Bacillus subtilis [TaxId: 1423]}
Probab=91.56 E-value=0.022 Score=45.51 Aligned_cols=20 Identities=20% Similarity=0.413 Sum_probs=18.6
Q ss_pred cEEEEEeCCCCChHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i 214 (229)
+..++.|+.|.|||||++.+
T Consensus 98 ~~~vl~G~SGVGKSSLiN~L 117 (231)
T d1t9ha2 98 KTTVFAGQSGVGKSSLLNAI 117 (231)
T ss_dssp SEEEEEESHHHHHHHHHHHH
T ss_pred ceEEEECCCCccHHHHHHhh
Confidence 68899999999999999987
No 61
>d1w36d1 c.37.1.19 (D:2-360) Exodeoxyribonuclease V alpha chain (RecD) {Escherichia coli [TaxId: 562]}
Probab=91.08 E-value=0.048 Score=46.02 Aligned_cols=20 Identities=25% Similarity=0.446 Sum_probs=18.0
Q ss_pred cEEEEEeCCCCChHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i 214 (229)
+..+|+||-|+||||++..+
T Consensus 164 ~~~vI~G~pGTGKTt~i~~~ 183 (359)
T d1w36d1 164 RISVISGGPGTGKTTTVAKL 183 (359)
T ss_dssp SEEEEECCTTSTHHHHHHHH
T ss_pred CeEEEEcCCCCCceehHHHH
Confidence 79999999999999998654
No 62
>d1htwa_ c.37.1.18 (A:) Hypothetical protein HI0065 {Haemophilus influenzae [TaxId: 727]}
Probab=90.96 E-value=0.084 Score=39.48 Aligned_cols=21 Identities=29% Similarity=0.387 Sum_probs=19.4
Q ss_pred cEEEEEeCCCCChHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLG 215 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~ 215 (229)
.++.|.|+=|+|||||.|.++
T Consensus 34 ~ii~L~G~LGaGKTtfvr~~~ 54 (158)
T d1htwa_ 34 IMVYLNGDLGAGKTTLTRGML 54 (158)
T ss_dssp EEEEEECSTTSSHHHHHHHHH
T ss_pred eEEEEecCCCccHHHHHHHHH
Confidence 789999999999999999775
No 63
>d1svma_ c.37.1.20 (A:) Papillomavirus large T antigen helicase domain {Simian virus 40 [TaxId: 10633]}
Probab=90.50 E-value=0.095 Score=44.21 Aligned_cols=23 Identities=35% Similarity=0.424 Sum_probs=20.0
Q ss_pred CCcEEEEEeCCCCChHHHHHHHH
Q psy13262 193 KPTVLLLTGPNMGGKSTVMRQLG 215 (229)
Q Consensus 193 ~~~~~~ltGpN~~GKStlLk~i~ 215 (229)
..+++++.||.|.|||++.+.++
T Consensus 153 ~~~~~~~~g~~~~gk~~~~~~~~ 175 (362)
T d1svma_ 153 KKRYWLFKGPIDSGKTTLAAALL 175 (362)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHH
T ss_pred CcCeEEEECCCCCCHHHHHHHHH
Confidence 34799999999999999988764
No 64
>d1xpua3 c.37.1.11 (A:129-417) Transcription termination factor Rho, ATPase domain {Escherichia coli [TaxId: 562]}
Probab=90.05 E-value=0.18 Score=41.29 Aligned_cols=28 Identities=14% Similarity=0.282 Sum_probs=24.1
Q ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHh
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLITILAQ 222 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~~~ma~ 222 (229)
++.+|.|+.|+||||++..++-.+...+
T Consensus 44 Qr~~I~g~~g~GKT~l~~~i~~~~~~~~ 71 (289)
T d1xpua3 44 QRGLIVAPPKAGKTMLLQNIAQSIAYNH 71 (289)
T ss_dssp CEEEEEECSSSSHHHHHHHHHHHHHHHC
T ss_pred CeeeEeCCCCCCHHHHHHHHHHHHhhcC
Confidence 8999999999999999999977665443
No 65
>d1g41a_ c.37.1.20 (A:) HslU {Haemophilus influenzae [TaxId: 727]}
Probab=89.73 E-value=0.085 Score=45.77 Aligned_cols=23 Identities=30% Similarity=0.577 Sum_probs=20.6
Q ss_pred cEEEEEeCCCCChHHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLI 217 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~ 217 (229)
+.+++.||.|+|||-+.|++|-+
T Consensus 50 sNILliGPTGvGKTlLAr~LAk~ 72 (443)
T d1g41a_ 50 KNILMIGPTGVGKTEIARRLAKL 72 (443)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHH
T ss_pred ccEEEECCCCCCHHHHHHHHHHH
Confidence 57999999999999999999753
No 66
>d1l8qa2 c.37.1.20 (A:77-289) Chromosomal replication initiation factor DnaA {Aquifex aeolicus [TaxId: 63363]}
Probab=89.27 E-value=0.11 Score=40.34 Aligned_cols=23 Identities=17% Similarity=0.309 Sum_probs=19.7
Q ss_pred cEEEEEeCCCCChHHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLI 217 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~ 217 (229)
..+.|.||.|+|||-|++.++--
T Consensus 37 n~l~l~G~~G~GKTHLl~A~~~~ 59 (213)
T d1l8qa2 37 NPIFIYGSVGTGKTHLLQAAGNE 59 (213)
T ss_dssp SSEEEECSSSSSHHHHHHHHHHH
T ss_pred CcEEEECCCCCcHHHHHHHHHHH
Confidence 34889999999999999988654
No 67
>d1u94a1 c.37.1.11 (A:6-268) RecA protein, ATPase-domain {Escherichia coli [TaxId: 562]}
Probab=88.84 E-value=0.17 Score=40.60 Aligned_cols=24 Identities=25% Similarity=0.394 Sum_probs=20.3
Q ss_pred cEEEEEeCCCCChHHHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLIT 218 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~~ 218 (229)
+++.|.||+|+||||++=+++..+
T Consensus 55 ~itei~G~~gsGKTtl~l~~~~~~ 78 (263)
T d1u94a1 55 RIVEIYGPESSGKTTLTLQVIAAA 78 (263)
T ss_dssp SEEEEECSTTSSHHHHHHHHHHHH
T ss_pred eEEEEecCCCcHHHHHHHHHHHHH
Confidence 899999999999999976665544
No 68
>d1r6bx3 c.37.1.20 (X:437-751) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=88.70 E-value=0.16 Score=41.76 Aligned_cols=23 Identities=35% Similarity=0.445 Sum_probs=20.6
Q ss_pred cEEEEEeCCCCChHHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLI 217 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~ 217 (229)
..+.++||.|.|||.+.|+++-+
T Consensus 53 ~~~lf~Gp~GvGKT~lak~la~~ 75 (315)
T d1r6bx3 53 GSFLFAGPTGVGKTEVTVQLSKA 75 (315)
T ss_dssp EEEEEECSTTSSHHHHHHHHHHH
T ss_pred eEEEEECCCcchhHHHHHHHHhh
Confidence 57889999999999999998765
No 69
>d1g8pa_ c.37.1.20 (A:) ATPase subunit of magnesium chelatase, BchI {Rhodobacter capsulatus [TaxId: 1061]}
Probab=88.44 E-value=0.086 Score=43.32 Aligned_cols=22 Identities=36% Similarity=0.404 Sum_probs=19.9
Q ss_pred cEEEEEeCCCCChHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGL 216 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l 216 (229)
..++|.||-|.||||++|.++-
T Consensus 29 h~vLl~G~pG~GKT~lar~~~~ 50 (333)
T d1g8pa_ 29 GGVLVFGDRGTGKSTAVRALAA 50 (333)
T ss_dssp CCEEEECCGGGCTTHHHHHHHH
T ss_pred CeEEEECCCCccHHHHHHHHHH
Confidence 4799999999999999999864
No 70
>d2a5yb3 c.37.1.20 (B:109-385) CED-4, NB-ARC domain {Caenorhabditis elegans [TaxId: 6239]}
Probab=88.08 E-value=0.18 Score=40.47 Aligned_cols=22 Identities=32% Similarity=0.329 Sum_probs=19.3
Q ss_pred CcEEEEEeCCCCChHHHHHHHH
Q psy13262 194 PTVLLLTGPNMGGKSTVMRQLG 215 (229)
Q Consensus 194 ~~~~~ltGpN~~GKStlLk~i~ 215 (229)
..+++|+|.-|.|||||.+.+.
T Consensus 44 ~~~v~I~GmgGiGKTtLA~~v~ 65 (277)
T d2a5yb3 44 SFFLFLHGRAGSGKSVIASQAL 65 (277)
T ss_dssp SEEEEEECSTTSSHHHHHHHHH
T ss_pred ceEEEEECCCCCCHHHHHHHHH
Confidence 4789999999999999988763
No 71
>d1tq4a_ c.37.1.8 (A:) Interferon-inducible GTPase {Mouse (Mus musculus) [TaxId: 10090]}
Probab=86.48 E-value=0.2 Score=42.58 Aligned_cols=20 Identities=30% Similarity=0.423 Sum_probs=18.4
Q ss_pred cEEEEEeCCCCChHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i 214 (229)
-.++|+|..|+|||||++.+
T Consensus 57 l~Iai~G~~n~GKSSLiNaL 76 (400)
T d1tq4a_ 57 LNVAVTGETGSGKSSFINTL 76 (400)
T ss_dssp EEEEEEECTTSSHHHHHHHH
T ss_pred cEEEEECCCCCCHHHHHHHH
Confidence 46999999999999999987
No 72
>d1f5na2 c.37.1.8 (A:7-283) Interferon-induced guanylate-binding protein 1 (GBP1), N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=84.96 E-value=0.25 Score=39.92 Aligned_cols=20 Identities=35% Similarity=0.483 Sum_probs=18.3
Q ss_pred cEEEEEeCCCCChHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i 214 (229)
.++.|+||-.+|||+||..+
T Consensus 33 ~vvsi~G~~~sGKS~llN~l 52 (277)
T d1f5na2 33 VVVAIVGLYRTGKSYLMNKL 52 (277)
T ss_dssp EEEEEEEBTTSSHHHHHHHH
T ss_pred EEEEEECCCCCCHHHHHHHH
Confidence 58889999999999999876
No 73
>d1xp8a1 c.37.1.11 (A:15-282) RecA protein, ATPase-domain {Deinococcus radiodurans [TaxId: 1299]}
Probab=84.54 E-value=0.43 Score=38.32 Aligned_cols=23 Identities=26% Similarity=0.420 Sum_probs=19.7
Q ss_pred cEEEEEeCCCCChHHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLI 217 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~ 217 (229)
+++.|.||.++|||++.-+++..
T Consensus 58 ~itei~G~~~sGKT~l~l~~~~~ 80 (268)
T d1xp8a1 58 RITEIYGPESGGKTTLALAIVAQ 80 (268)
T ss_dssp SEEEEEESTTSSHHHHHHHHHHH
T ss_pred eEEEEecCCccchHHHHHHHHHH
Confidence 89999999999999998666443
No 74
>d1u0ja_ c.37.1.20 (A:) Rep 40 protein helicase domain {Adeno-associated virus 2, AAV2 [TaxId: 10804]}
Probab=83.79 E-value=0.44 Score=38.14 Aligned_cols=24 Identities=25% Similarity=0.483 Sum_probs=20.8
Q ss_pred CCcEEEEEeCCCCChHHHHHHHHH
Q psy13262 193 KPTVLLLTGPNMGGKSTVMRQLGL 216 (229)
Q Consensus 193 ~~~~~~ltGpN~~GKStlLk~i~l 216 (229)
+..++.|.||-+.|||+|+.++.-
T Consensus 103 k~n~~~l~G~~~tGKS~f~~~i~~ 126 (267)
T d1u0ja_ 103 KRNTIWLFGPATTGKTNIAEAIAH 126 (267)
T ss_dssp TCCEEEEECSTTSSHHHHHHHHHH
T ss_pred ccEEEEEEcCCCCCHHHHHHHHHH
Confidence 458999999999999999988743
No 75
>d1jbka_ c.37.1.20 (A:) ClpB, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=83.75 E-value=0.45 Score=36.46 Aligned_cols=25 Identities=20% Similarity=0.200 Sum_probs=20.9
Q ss_pred CcEEEEEeCCCCChHHHHHHHHHHH
Q psy13262 194 PTVLLLTGPNMGGKSTVMRQLGLIT 218 (229)
Q Consensus 194 ~~~~~ltGpN~~GKStlLk~i~l~~ 218 (229)
...++|+||.|.|||++..-++.-.
T Consensus 43 k~n~lLvG~pGVGKTalv~~LA~ri 67 (195)
T d1jbka_ 43 KNNPVLIGEPGVGKTAIVEGLAQRI 67 (195)
T ss_dssp SCEEEEECCTTSCHHHHHHHHHHHH
T ss_pred CCCeEEEecCCcccHHHHHHHHHHH
Confidence 3688999999999999998776543
No 76
>d1r6bx2 c.37.1.20 (X:169-436) ClpA, an Hsp100 chaperone, AAA+ modules {Escherichia coli [TaxId: 562]}
Probab=83.21 E-value=0.43 Score=38.34 Aligned_cols=24 Identities=25% Similarity=0.261 Sum_probs=20.4
Q ss_pred CcEEEEEeCCCCChHHHHHHHHHH
Q psy13262 194 PTVLLLTGPNMGGKSTVMRQLGLI 217 (229)
Q Consensus 194 ~~~~~ltGpN~~GKStlLk~i~l~ 217 (229)
...++|+||.|.|||++.+-++.-
T Consensus 39 k~n~lLVG~~GvGKTalv~~la~r 62 (268)
T d1r6bx2 39 KNNPLLVGESGVGKTAIAEGLAWR 62 (268)
T ss_dssp SCEEEEECCTTSSHHHHHHHHHHH
T ss_pred cCCcEEECCCCCcHHHHHHHHHHH
Confidence 468899999999999999876543
No 77
>d1w44a_ c.37.1.11 (A:) NTPase P4 {Bacteriophage phi-12 [TaxId: 161736]}
Probab=83.11 E-value=0.33 Score=40.12 Aligned_cols=23 Identities=26% Similarity=0.525 Sum_probs=19.4
Q ss_pred cEEEEEeCCCCChHHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLI 217 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~ 217 (229)
.+++++||.|+|||.+-|.++..
T Consensus 124 g~~l~~G~pG~GKT~la~ala~~ 146 (321)
T d1w44a_ 124 GMVIVTGKGNSGKTPLVHALGEA 146 (321)
T ss_dssp EEEEEECSSSSCHHHHHHHHHHH
T ss_pred ceEEEECCCCccHHHHHHHHHHH
Confidence 46777999999999999988654
No 78
>d1mo6a1 c.37.1.11 (A:1-269) RecA protein, ATPase-domain {Mycobacterium tuberculosis [TaxId: 1773]}
Probab=83.02 E-value=0.51 Score=37.91 Aligned_cols=21 Identities=33% Similarity=0.465 Sum_probs=18.3
Q ss_pred cEEEEEeCCCCChHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLG 215 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~ 215 (229)
+++.|.||+++||||++-+++
T Consensus 61 ~i~e~~G~~~~GKT~l~l~~~ 81 (269)
T d1mo6a1 61 RVIEIYGPESSGKTTVALHAV 81 (269)
T ss_dssp SEEEEECSSSSSHHHHHHHHH
T ss_pred eeEEEecCCCcHHHHHHHHHH
Confidence 899999999999999965443
No 79
>d1um8a_ c.37.1.20 (A:) ClpX {Helicobacter pylori [TaxId: 210]}
Probab=82.05 E-value=0.43 Score=39.96 Aligned_cols=23 Identities=30% Similarity=0.489 Sum_probs=20.0
Q ss_pred cEEEEEeCCCCChHHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLI 217 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~ 217 (229)
..+++.||.|+|||-+-|++|-.
T Consensus 69 ~niLfiGPTGvGKTElAk~LA~~ 91 (364)
T d1um8a_ 69 SNILLIGPTGSGKTLMAQTLAKH 91 (364)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHH
T ss_pred cceeeeCCCCccHHHHHHHHHhh
Confidence 56888899999999999998743
No 80
>d1qvra3 c.37.1.20 (A:536-850) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=81.95 E-value=0.45 Score=38.91 Aligned_cols=24 Identities=25% Similarity=0.403 Sum_probs=20.4
Q ss_pred cEEEEEeCCCCChHHHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLIT 218 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~~ 218 (229)
..+.++||.|.|||.+.|.++-..
T Consensus 54 ~~~lf~Gp~G~GKt~lak~la~~l 77 (315)
T d1qvra3 54 GSFLFLGPTGVGKTELAKTLAATL 77 (315)
T ss_dssp EEEEEBSCSSSSHHHHHHHHHHHH
T ss_pred eEEEEECCCcchHHHHHHHHHHHh
Confidence 478899999999999999887553
No 81
>d2mysa2 c.37.1.9 (A:4-33,A:80-843) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=77.68 E-value=1 Score=41.57 Aligned_cols=29 Identities=21% Similarity=0.389 Sum_probs=23.0
Q ss_pred CcEEEEEeCCCCChHHHHHHH-HHHHHHHh
Q psy13262 194 PTVLLLTGPNMGGKSTVMRQL-GLITILAQ 222 (229)
Q Consensus 194 ~~~~~ltGpN~~GKStlLk~i-~l~~~ma~ 222 (229)
.+.++|+|-.|+|||...|.+ --++.++.
T Consensus 123 ~QsIiisGeSGaGKTe~~K~il~yL~~~~~ 152 (794)
T d2mysa2 123 NQSILITGESGAGKTVNTKRVIQYFATIAA 152 (794)
T ss_dssp CEEEEEEECTTSCHHHHHHHHHHHHHHHTC
T ss_pred CcEEEEEcCCCCCHHHHHHHHHHHHHHHcC
Confidence 489999999999999999987 34444443
No 82
>d1tuea_ c.37.1.20 (A:) Replication protein E1 helicase domain {Human papillomavirus type 18 [TaxId: 333761]}
Probab=77.48 E-value=0.71 Score=35.60 Aligned_cols=22 Identities=32% Similarity=0.428 Sum_probs=19.1
Q ss_pred CCcEEEEEeCCCCChHHHHHHH
Q psy13262 193 KPTVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 193 ~~~~~~ltGpN~~GKStlLk~i 214 (229)
+..+++|.||-..|||++...+
T Consensus 52 Kkn~i~~~GP~~TGKS~f~~sl 73 (205)
T d1tuea_ 52 KKNCLVFCGPANTGKSYFGMSF 73 (205)
T ss_dssp TCSEEEEESCGGGCHHHHHHHH
T ss_pred CceEEEEECCCCccHHHHHHHH
Confidence 5589999999999999997654
No 83
>d1d0xa2 c.37.1.9 (A:2-33,A:80-759) Myosin S1, motor domain {Dictyostelium discoideum [TaxId: 44689]}
Probab=76.49 E-value=1.2 Score=40.42 Aligned_cols=28 Identities=25% Similarity=0.413 Sum_probs=22.5
Q ss_pred CcEEEEEeCCCCChHHHHHHH-HHHHHHH
Q psy13262 194 PTVLLLTGPNMGGKSTVMRQL-GLITILA 221 (229)
Q Consensus 194 ~~~~~ltGpN~~GKStlLk~i-~l~~~ma 221 (229)
.++++|+|..|+|||...|.+ --++.|+
T Consensus 125 nQsIiisGeSGaGKTe~~k~il~yL~~~s 153 (712)
T d1d0xa2 125 NQSLLITGESGAGKTENTKKVIQYLASVA 153 (712)
T ss_dssp CEEEEEECSTTSSHHHHHHHHHHHHHHHH
T ss_pred CceEEEeCCCCCCHHHHHHHHHHHHHHHh
Confidence 389999999999999999987 3333444
No 84
>d2akab1 c.37.1.8 (B:6-304) Dynamin G domain {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=76.42 E-value=0.78 Score=36.42 Aligned_cols=21 Identities=24% Similarity=0.419 Sum_probs=18.8
Q ss_pred cEEEEEeCCCCChHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLG 215 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~ 215 (229)
..++++|.=.+||||||+.+.
T Consensus 27 P~ivvvG~~SsGKSsliNaLl 47 (299)
T d2akab1 27 PQIAVVGGQSAGKSSVLENFV 47 (299)
T ss_dssp CEEEEEEBTTSCHHHHHHHHH
T ss_pred CeEEEEcCCCCCHHHHHHHHh
Confidence 478899999999999999884
No 85
>d2jdid3 c.37.1.11 (D:82-357) Central domain of beta subunit of F1 ATP synthase {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=76.17 E-value=1 Score=36.26 Aligned_cols=24 Identities=21% Similarity=0.066 Sum_probs=21.4
Q ss_pred cEEEEEeCCCCChHHHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLIT 218 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~~ 218 (229)
+++.|.|+-|.||||++..++..+
T Consensus 69 Qr~~If~~~g~GKt~l~~~i~~~~ 92 (276)
T d2jdid3 69 GKIGLFGGAGVGKTVLIMELINNV 92 (276)
T ss_dssp CEEEEEECTTSSHHHHHHHHHHHH
T ss_pred CEEEeeCCCCCCHHHHHHHHHHHH
Confidence 899999999999999999887654
No 86
>d2bcgg3 d.16.1.6 (G:302-399) Guanine nucleotide dissociation inhibitor, GDI {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=75.73 E-value=1.1 Score=30.26 Aligned_cols=27 Identities=26% Similarity=0.420 Sum_probs=21.9
Q ss_pred eeeEEEeecCCCCCCCeEE--EEeeecCc
Q psy13262 16 ITAIAVIEDIQKCPSGYTV--ISKTVDQD 42 (229)
Q Consensus 16 ~t~~~~~~~~~~~p~g~~~--is~t~~~d 42 (229)
|--.+++++++-||+||++ ||.+.+.|
T Consensus 42 IYv~~~S~~h~V~~kg~yiAiVST~vET~ 70 (98)
T d2bcgg3 42 IYVAIVSDAHNVCSKGHYLAIISTIIETD 70 (98)
T ss_dssp EEEEEEEGGGTSSCTTCEEEEEEEECCSS
T ss_pred EEEEEeccccccCCCCcEEEEEEEEeecC
Confidence 4445677888999999999 99998874
No 87
>d1w7ja2 c.37.1.9 (A:63-792) Myosin S1, motor domain {Chicken (Gallus gallus), Va isoform [TaxId: 9031]}
Probab=75.19 E-value=1.3 Score=40.41 Aligned_cols=21 Identities=14% Similarity=0.325 Sum_probs=19.5
Q ss_pred CcEEEEEeCCCCChHHHHHHH
Q psy13262 194 PTVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 194 ~~~~~ltGpN~~GKStlLk~i 214 (229)
.++++|+|..|+|||...|.+
T Consensus 94 ~Q~IiisGeSGsGKTe~~k~i 114 (730)
T d1w7ja2 94 NQSIIVSGESGAGKTVSAKYA 114 (730)
T ss_dssp CEEEEEECSTTSSHHHHHHHH
T ss_pred CeEEEEEeCCCCCHHHHHHHH
Confidence 389999999999999999987
No 88
>d1kk8a2 c.37.1.9 (A:1-28,A:77-837) Myosin S1, motor domain {Bay scallop (Aequipecten irradians) [TaxId: 31199]}
Probab=75.02 E-value=1.1 Score=41.25 Aligned_cols=21 Identities=24% Similarity=0.387 Sum_probs=19.5
Q ss_pred CcEEEEEeCCCCChHHHHHHH
Q psy13262 194 PTVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 194 ~~~~~ltGpN~~GKStlLk~i 214 (229)
.++++|+|-.|+|||...|.+
T Consensus 121 nQ~IiisGESGaGKTe~~K~i 141 (789)
T d1kk8a2 121 NQSCLITGESGAGKTENTKKV 141 (789)
T ss_dssp EEEEEEECSTTSSHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHH
Confidence 389999999999999999987
No 89
>d1br2a2 c.37.1.9 (A:80-789) Myosin S1, motor domain {Chicken (Gallus gallus), pectoral muscle [TaxId: 9031]}
Probab=74.75 E-value=1.4 Score=40.08 Aligned_cols=21 Identities=24% Similarity=0.390 Sum_probs=19.6
Q ss_pred CcEEEEEeCCCCChHHHHHHH
Q psy13262 194 PTVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 194 ~~~~~ltGpN~~GKStlLk~i 214 (229)
.++++|+|-.|+|||+..|.+
T Consensus 91 ~Q~IiisGeSGaGKTe~~k~i 111 (710)
T d1br2a2 91 DQSILCTGESGAGKTENTKKV 111 (710)
T ss_dssp CEEEEEECSTTSSHHHHHHHH
T ss_pred CcEEEEEeCCCCCHHHHHHHH
Confidence 389999999999999999987
No 90
>d2jdia3 c.37.1.11 (A:95-379) Central domain of alpha subunit of F1 ATP synthase {Cow (Bos taurus) [TaxId: 9913]}
Probab=73.40 E-value=1.2 Score=35.97 Aligned_cols=29 Identities=14% Similarity=0.054 Sum_probs=24.4
Q ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHhc
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLITILAQM 223 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~~~ma~~ 223 (229)
+++.|.|+-|.|||++|..++..+...+.
T Consensus 69 Qr~~If~~~g~GKt~ll~~~~~~~~~~~~ 97 (285)
T d2jdia3 69 QRELIIGDRQTGKTSIAIDTIINQKRFND 97 (285)
T ss_dssp CBCEEEESTTSSHHHHHHHHHHHTHHHHT
T ss_pred CEEEeecCCCCChHHHHHHHHHhHHhhcc
Confidence 89999999999999999888777655543
No 91
>d1vg0a2 d.16.1.6 (A:445-557) Rab escort protein 1 {Rat (Rattus norvegicus) [TaxId: 10116]}
Probab=72.64 E-value=1.2 Score=30.80 Aligned_cols=30 Identities=10% Similarity=0.226 Sum_probs=23.9
Q ss_pred CCCCeeeEEEeecCCCCCCCeEE--EEeeecC
Q psy13262 12 DDKPITAIAVIEDIQKCPSGYTV--ISKTVDQ 41 (229)
Q Consensus 12 ~~~~~t~~~~~~~~~~~p~g~~~--is~t~~~ 41 (229)
...+|.-+...++...||+|+++ +|...++
T Consensus 36 ~~~~v~vl~~ss~~~vCP~G~yv~~~St~~t~ 67 (113)
T d1vg0a2 36 GSFAVRVIELCSSTMTCMKGTYLVHLTCMSSK 67 (113)
T ss_dssp TSCCEEEEEECGGGTSSCTTCEEEEEEEECSS
T ss_pred CCCCEEEEEecCCcccCCCCCEEEEEEEcCCC
Confidence 45688888999999999999999 5655443
No 92
>d1lkxa_ c.37.1.9 (A:) Myosin S1, motor domain {Dictyostelium discoideum, class-I myosin MyoE [TaxId: 44689]}
Probab=72.49 E-value=1.1 Score=40.46 Aligned_cols=21 Identities=14% Similarity=0.460 Sum_probs=19.5
Q ss_pred CcEEEEEeCCCCChHHHHHHH
Q psy13262 194 PTVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 194 ~~~~~ltGpN~~GKStlLk~i 214 (229)
.++++|+|..|+|||+..|.+
T Consensus 86 ~QsIiisGeSGsGKTe~~k~i 106 (684)
T d1lkxa_ 86 NQCVIISGESGAGKTEASKKI 106 (684)
T ss_dssp CEEEEEECSTTSSHHHHHHHH
T ss_pred CeEEEEEcCCCCCHHHHHHHH
Confidence 389999999999999999987
No 93
>d1d5ta2 d.16.1.6 (A:292-388) Guanine nucleotide dissociation inhibitor, GDI {Cow (Bos taurus) [TaxId: 9913]}
Probab=71.57 E-value=1.6 Score=29.38 Aligned_cols=28 Identities=18% Similarity=0.140 Sum_probs=22.1
Q ss_pred CeeeEEEeecCCCCCCCeEE--EEeeecCc
Q psy13262 15 PITAIAVIEDIQKCPSGYTV--ISKTVDQD 42 (229)
Q Consensus 15 ~~t~~~~~~~~~~~p~g~~~--is~t~~~d 42 (229)
-|--.+++++++-||+||++ ||.+.+.+
T Consensus 40 DIYv~~~S~~h~V~~kg~yiaiVST~vET~ 69 (97)
T d1d5ta2 40 DIYVCMISYAHNVAAQGKYIAIASTTVETT 69 (97)
T ss_dssp CEEEEEEEGGGTSSCTTCEEEEEEEECCSS
T ss_pred CEEEEEeccccccCCCCeEEEEEEEEEecC
Confidence 34455677888999999998 89888763
No 94
>d1fx0a3 c.37.1.11 (A:97-372) Central domain of alpha subunit of F1 ATP synthase {Spinach (Spinacia oleracea), chloroplast [TaxId: 3562]}
Probab=69.07 E-value=1.1 Score=35.92 Aligned_cols=21 Identities=24% Similarity=0.240 Sum_probs=18.7
Q ss_pred cEEEEEeCCCCChHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLG 215 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~ 215 (229)
+++.|.|+.|.|||+++..+.
T Consensus 68 Qr~~Ifg~~g~GKt~l~~~~~ 88 (276)
T d1fx0a3 68 QRELIIGDRQTGKTAVATDTI 88 (276)
T ss_dssp CBCBEEESSSSSHHHHHHHHH
T ss_pred ceEeeccCCCCChHHHHHHHH
Confidence 889999999999999987753
No 95
>d1qvra2 c.37.1.20 (A:149-535) ClpB, AAA+ modules {Thermus thermophilus [TaxId: 274]}
Probab=68.98 E-value=1.3 Score=37.23 Aligned_cols=23 Identities=22% Similarity=0.235 Sum_probs=19.0
Q ss_pred cEEEEEeCCCCChHHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLI 217 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~ 217 (229)
...+|+|+.|.|||++..-++.-
T Consensus 44 ~n~llvG~~GvGKtaiv~~la~~ 66 (387)
T d1qvra2 44 NNPVLIGEPGVGKTAIVEGLAQR 66 (387)
T ss_dssp CCCEEEECTTSCHHHHHHHHHHH
T ss_pred CCCeEECCCCCCHHHHHHHHHHH
Confidence 56789999999999998866543
No 96
>d2fz4a1 c.37.1.19 (A:24-229) DNA repair protein RAD25 {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=67.67 E-value=2.2 Score=31.98 Aligned_cols=29 Identities=21% Similarity=0.370 Sum_probs=20.1
Q ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHhcCCCcc
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLITILAQMENPQL 228 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~~~ma~~G~~v~ 228 (229)
+..+|..|-|+|||.. + +.++++.+-+++
T Consensus 86 ~~~ll~~~tG~GKT~~----a-~~~~~~~~~~~L 114 (206)
T d2fz4a1 86 KRGCIVLPTGSGKTHV----A-MAAINELSTPTL 114 (206)
T ss_dssp SEEEEEESSSTTHHHH----H-HHHHHHSCSCEE
T ss_pred CCcEEEeCCCCCceeh----H-HhHHHHhcCcee
Confidence 4567889999999953 2 345566666654
No 97
>d1gkub1 c.37.1.16 (B:1-250) Helicase-like "domain" of reverse gyrase {Archaeon Archaeoglobus fulgidus [TaxId: 2234]}
Probab=64.60 E-value=1.4 Score=33.70 Aligned_cols=17 Identities=24% Similarity=0.241 Sum_probs=14.7
Q ss_pred cEEEEEeCCCCChHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVM 211 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlL 211 (229)
+.++|++|.|+|||+..
T Consensus 59 ~~~~i~apTGsGKT~~~ 75 (237)
T d1gkub1 59 ESFAATAPTGVGKTSFG 75 (237)
T ss_dssp CCEECCCCBTSCSHHHH
T ss_pred CCEEEEecCCChHHHHH
Confidence 67889999999999754
No 98
>d2p6ra3 c.37.1.19 (A:1-202) Hel308 helicase {Archaeoglobus fulgidus [TaxId: 2234]}
Probab=62.97 E-value=1.3 Score=32.83 Aligned_cols=16 Identities=38% Similarity=0.557 Sum_probs=14.0
Q ss_pred cEEEEEeCCCCChHHH
Q psy13262 195 TVLLLTGPNMGGKSTV 210 (229)
Q Consensus 195 ~~~~ltGpN~~GKStl 210 (229)
+.++|.+|.|+|||+.
T Consensus 41 ~~~il~apTGsGKT~~ 56 (202)
T d2p6ra3 41 KNLLLAMPTAAGKTLL 56 (202)
T ss_dssp SCEEEECSSHHHHHHH
T ss_pred CCEEEEcCCCCchhHH
Confidence 5688999999999875
No 99
>d1g8fa3 c.37.1.15 (A:390-511) ATP sulfurylase C-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=58.19 E-value=3.2 Score=29.07 Aligned_cols=20 Identities=10% Similarity=0.057 Sum_probs=18.0
Q ss_pred cEEEEEeCCCCChHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i 214 (229)
=.+.+||-.++||||+-+.+
T Consensus 7 f~i~~tg~~~~gk~~ia~al 26 (122)
T d1g8fa3 7 FSIVLGNSLTVSREQLSIAL 26 (122)
T ss_dssp EEEEECTTCCSCHHHHHHHH
T ss_pred eEEEEeCCCCCCHHHHHHHH
Confidence 57889999999999998876
No 100
>d1hv8a1 c.37.1.19 (A:3-210) Putative DEAD box RNA helicase {Archaeon Methanococcus jannaschii [TaxId: 2190]}
Probab=54.87 E-value=3.4 Score=30.91 Aligned_cols=30 Identities=7% Similarity=-0.040 Sum_probs=19.7
Q ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHhcC
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLITILAQME 224 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~~~ma~~G 224 (229)
.-+++..|+|+|||...=...+...+.+.|
T Consensus 43 ~d~iv~a~TGsGKT~~~~l~~~~~~~~~~~ 72 (208)
T d1hv8a1 43 YNIVAQARTGSGKTASFAIPLIELVNENNG 72 (208)
T ss_dssp SEEEEECCSSSSHHHHHHHHHHHHSCSSSS
T ss_pred CCeeeechhcccccceeecccccccccccC
Confidence 468899999999998764444433333333
No 101
>d1puja_ c.37.1.8 (A:) Probable GTPase YlqF {Bacillus subtilis [TaxId: 1423]}
Probab=45.08 E-value=6.9 Score=30.42 Aligned_cols=20 Identities=35% Similarity=0.411 Sum_probs=18.0
Q ss_pred cEEEEEeCCCCChHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQL 214 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i 214 (229)
-.++|+|-.-.||||++..+
T Consensus 113 ~~v~vvG~PNvGKSsliN~L 132 (273)
T d1puja_ 113 IRALIIGIPNVGKSTLINRL 132 (273)
T ss_dssp EEEEEEESTTSSHHHHHHHH
T ss_pred eEEEEEecCccchhhhhhhh
Confidence 56899999999999999976
No 102
>d1t5la1 c.37.1.19 (A:2-414) Nucleotide excision repair enzyme UvrB {Bacillus caldotenax [TaxId: 1395]}
Probab=39.34 E-value=10 Score=31.70 Aligned_cols=30 Identities=27% Similarity=0.445 Sum_probs=23.1
Q ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHhcCCCccC
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLITILAQMENPQLI 229 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~~~ma~~G~~v~~ 229 (229)
+...|+|..|+|||-++ +.+..+.+-|++|
T Consensus 32 ~~q~l~GltGS~ka~~i-----A~l~~~~~rp~LV 61 (413)
T d1t5la1 32 KHQTLLGATGTGKTFTI-----SNVIAQVNKPTLV 61 (413)
T ss_dssp SEEEEEECTTSCHHHHH-----HHHHHHHTCCEEE
T ss_pred CcEEEeCCCCcHHHHHH-----HHHHHHhCCCEEE
Confidence 67889999999988775 4556677777764
No 103
>d1rh7a_ g.77.1.1 (A:) Resistin-like beta (FIZZ2) {Mouse (Mus musculus) [TaxId: 10090]}
Probab=39.32 E-value=9.6 Score=24.30 Aligned_cols=36 Identities=19% Similarity=0.378 Sum_probs=24.1
Q ss_pred HhhhhhcCCCCCCeeeEEEeecCCCCCCCeEEEEee
Q psy13262 3 KQVFQSFIPDDKPITAIAVIEDIQKCPSGYTVISKT 38 (229)
Q Consensus 3 ~~~~~~~~~~~~~~t~~~~~~~~~~~p~g~~~is~t 38 (229)
||++++++|..---+.|.=-.....||.||.+-..+
T Consensus 12 ke~l~~l~~~~l~C~SV~s~G~lasCPaG~~vTgCa 47 (81)
T d1rh7a_ 12 KEALSRQEPKTISCTSVTSSGRLASCPAGMVVTGCA 47 (81)
T ss_dssp TTTSTTSCCCCEEEEEEEEESSEEECCTTCEEEEEE
T ss_pred HHHHhhhcccceEEEEEeecCccccCCCCcEeeccc
Confidence 677888886543334444444455999999987765
No 104
>d1q0ua_ c.37.1.19 (A:) Probable DEAD box RNA helicase YqfR {Bacillus stearothermophilus [TaxId: 1422]}
Probab=38.15 E-value=4 Score=30.12 Aligned_cols=17 Identities=12% Similarity=0.122 Sum_probs=14.7
Q ss_pred cEEEEEeCCCCChHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVM 211 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlL 211 (229)
+-+++..|.|+|||...
T Consensus 39 ~dvii~a~TGSGKTlay 55 (209)
T d1q0ua_ 39 ESMVGQSQTGTGKTHAY 55 (209)
T ss_dssp CCEEEECCSSHHHHHHH
T ss_pred CCeEeecccccccceee
Confidence 67999999999999754
No 105
>d1t6na_ c.37.1.19 (A:) Spliceosome RNA helicase BAT1 (UAP56) {Human (Homo sapiens) [TaxId: 9606]}
Probab=36.64 E-value=8.3 Score=28.59 Aligned_cols=17 Identities=24% Similarity=0.227 Sum_probs=14.5
Q ss_pred cEEEEEeCCCCChHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVM 211 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlL 211 (229)
+-+++..|+|+|||...
T Consensus 39 ~dvl~~A~TGsGKTla~ 55 (207)
T d1t6na_ 39 MDVLCQAKSGMGKTAVF 55 (207)
T ss_dssp CCEEEECCTTSCHHHHH
T ss_pred CCeEEEecccccccccc
Confidence 67899999999998664
No 106
>d1wrba1 c.37.1.19 (A:164-401) putative ATP-dependent RNA helicase VlgB {Flatworm (Dugesia japonica) [TaxId: 6161]}
Probab=36.42 E-value=14 Score=27.88 Aligned_cols=27 Identities=7% Similarity=0.076 Sum_probs=20.7
Q ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLITILA 221 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~~~ma 221 (229)
+-+++..|.|+|||...=.-.|..++.
T Consensus 59 ~dvvi~a~TGsGKTlayllp~l~~l~~ 85 (238)
T d1wrba1 59 RDIMACAQTGSGKTAAFLIPIINHLVC 85 (238)
T ss_dssp CCEEEECCTTSSHHHHHHHHHHHHHHT
T ss_pred CCEEEECCCCCCcceeeHHHHHHHHHh
Confidence 679999999999998765555555554
No 107
>d1eg7a_ c.37.1.10 (A:) Formyltetrahydrofolate synthetase {Moorella thermoacetica [TaxId: 1525]}
Probab=36.29 E-value=19 Score=31.12 Aligned_cols=30 Identities=30% Similarity=0.458 Sum_probs=25.7
Q ss_pred cEEEEEeC----CCCChHHHHHHHHHHHHHHhcCCC
Q psy13262 195 TVLLLTGP----NMGGKSTVMRQLGLITILAQMENP 226 (229)
Q Consensus 195 ~~~~ltGp----N~~GKStlLk~i~l~~~ma~~G~~ 226 (229)
+.+++|+- -|-||||. +|||..-|++.|--
T Consensus 52 klilVTaitPTp~GEGKtTt--tiGL~~aL~~lgk~ 85 (549)
T d1eg7a_ 52 KLILVTAITPTPAGEGKTTT--SVGLTDALARLGKR 85 (549)
T ss_dssp EEEEEEESSCCTTCCCHHHH--HHHHHHHHHHTTCC
T ss_pred eEEEEEeCCCCCCCCCccee--HHhHHHHHHHhCCc
Confidence 78889984 48999998 89999999998853
No 108
>d2gc6a2 c.72.2.2 (A:1-296) Folylpolyglutamate synthetase {Lactobacillus casei [TaxId: 1582]}
Probab=33.91 E-value=19 Score=27.91 Aligned_cols=29 Identities=21% Similarity=0.332 Sum_probs=20.6
Q ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHHHhcCCC
Q psy13262 194 PTVLLLTGPNMGGKSTVMRQLGLITILAQMENP 226 (229)
Q Consensus 194 ~~~~~ltGpN~~GKStlLk~i~l~~~ma~~G~~ 226 (229)
-++++|||=| ||||.-..+. .+|-++|..
T Consensus 39 lkvI~VTGTN--GKtST~~~i~--~IL~~~G~k 67 (296)
T d2gc6a2 39 GRYIHVTGTN--GKGSAANAIA--HVLEASGLT 67 (296)
T ss_dssp SCEEEEECSS--SHHHHHHHHH--HHHHHTTCC
T ss_pred CCEEEEeccC--cHHHHHHHHH--HHHHhcCCc
Confidence 4799999987 5999877663 355566654
No 109
>d2g9na1 c.37.1.19 (A:21-238) Initiation factor 4a {Human (Homo sapiens) [TaxId: 9606]}
Probab=30.34 E-value=8.7 Score=28.82 Aligned_cols=17 Identities=12% Similarity=0.173 Sum_probs=14.9
Q ss_pred cEEEEEeCCCCChHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVM 211 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlL 211 (229)
+-+++..|+|+|||...
T Consensus 50 ~dvl~~a~TGsGKTlay 66 (218)
T d2g9na1 50 YDVIAQAQSGTGKTATF 66 (218)
T ss_dssp CCEEEECCTTSSHHHHH
T ss_pred CCEEEEcccchhhhhhh
Confidence 67899999999999775
No 110
>d1qdea_ c.37.1.19 (A:) Initiation factor 4a {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=29.37 E-value=13 Score=27.60 Aligned_cols=17 Identities=18% Similarity=0.194 Sum_probs=14.9
Q ss_pred cEEEEEeCCCCChHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVM 211 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlL 211 (229)
+-+++..|.|+|||...
T Consensus 48 ~dvl~~a~TGsGKT~a~ 64 (212)
T d1qdea_ 48 HDVLAQAQSGTGKTGTF 64 (212)
T ss_dssp CCEEEECCTTSSHHHHH
T ss_pred CCEEeecccccchhhhh
Confidence 67999999999999865
No 111
>d1s2ma1 c.37.1.19 (A:46-251) Putative ATP-dependent RNA helicase DHH1 {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
Probab=28.48 E-value=13 Score=27.18 Aligned_cols=17 Identities=24% Similarity=0.296 Sum_probs=14.4
Q ss_pred cEEEEEeCCCCChHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVM 211 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlL 211 (229)
+-+++..|.|+|||...
T Consensus 39 ~dvi~~a~tGsGKTlay 55 (206)
T d1s2ma1 39 RDILARAKNGTGKTAAF 55 (206)
T ss_dssp CCEEEECCTTSCHHHHH
T ss_pred CCEEEecCCcchhhhhh
Confidence 56899999999999654
No 112
>d2j0sa1 c.37.1.19 (A:22-243) Probable ATP-dependent RNA helicase DDX48 {Human (Homo sapiens) [TaxId: 9606]}
Probab=28.39 E-value=11 Score=28.32 Aligned_cols=17 Identities=12% Similarity=0.204 Sum_probs=14.4
Q ss_pred cEEEEEeCCCCChHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVM 211 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlL 211 (229)
+-+++..|+|+|||-..
T Consensus 55 ~dvi~~a~TGSGKTlay 71 (222)
T d2j0sa1 55 RDVIAQSQSGTGKTATF 71 (222)
T ss_dssp CCEEEECCTTSSHHHHH
T ss_pred CCeEEEcCcchhhhhhh
Confidence 67888999999999653
No 113
>d1oywa2 c.37.1.19 (A:1-206) RecQ helicase domain {Escherichia coli [TaxId: 562]}
Probab=27.50 E-value=9.5 Score=27.74 Aligned_cols=17 Identities=35% Similarity=0.382 Sum_probs=14.2
Q ss_pred cEEEEEeCCCCChHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVM 211 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlL 211 (229)
+.+++.-|.|+|||...
T Consensus 41 ~~vlv~apTGsGKT~~~ 57 (206)
T d1oywa2 41 RDCLVVMPTGGGKSLCY 57 (206)
T ss_dssp CCEEEECSCHHHHHHHH
T ss_pred CCEEEEcCCCCCCcchh
Confidence 56788999999999654
No 114
>d1veca_ c.37.1.19 (A:) DEAD box RNA helicase rck/p54 {Human (Homo sapiens) [TaxId: 9606]}
Probab=25.34 E-value=16 Score=26.92 Aligned_cols=17 Identities=29% Similarity=0.241 Sum_probs=14.6
Q ss_pred cEEEEEeCCCCChHHHH
Q psy13262 195 TVLLLTGPNMGGKSTVM 211 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlL 211 (229)
+-+++..|.|+|||...
T Consensus 41 ~dvl~~a~TGsGKTlay 57 (206)
T d1veca_ 41 RDILARAKNGTGKSGAY 57 (206)
T ss_dssp CCEEEECCSSSTTHHHH
T ss_pred CCEEeeccCcccccccc
Confidence 67899999999999664
No 115
>d1o5za2 c.72.2.2 (A:-2-293) Folylpolyglutamate synthetase {Thermotoga maritima [TaxId: 2336]}
Probab=21.60 E-value=33 Score=26.40 Aligned_cols=27 Identities=26% Similarity=0.386 Sum_probs=19.0
Q ss_pred cEEEEEeCCCCChHHHHHHHHHHHHHHhcCC
Q psy13262 195 TVLLLTGPNMGGKSTVMRQLGLITILAQMEN 225 (229)
Q Consensus 195 ~~~~ltGpN~~GKStlLk~i~l~~~ma~~G~ 225 (229)
.+++|||=| ||||.-.++.- +|-.+|.
T Consensus 44 kvI~VTGTN--GKTSt~~~i~~--IL~~~g~ 70 (296)
T d1o5za2 44 KTIHIGGTN--GKGSVANMVSN--ILVSQGY 70 (296)
T ss_dssp EEEEEECSS--SHHHHHHHHHH--HHHHHTC
T ss_pred CEEEEEecC--cHHHHHHHHHH--HHHHcCC
Confidence 799999986 59998777643 3444443
No 116
>d2d9qb1 b.1.1.3 (B:3-96) Granulocyte colony-stimulating factor (GC-SF) receptor, N-terminal domain {Human (Homo sapiens) [TaxId: 9606]}
Probab=21.08 E-value=20 Score=23.59 Aligned_cols=21 Identities=33% Similarity=0.426 Sum_probs=17.6
Q ss_pred CCCCCCeeeEEEeecCCCCCCCe
Q psy13262 10 IPDDKPITAIAVIEDIQKCPSGY 32 (229)
Q Consensus 10 ~~~~~~~t~~~~~~~~~~~p~g~ 32 (229)
++.+.|+|++|++ +.+|+..+
T Consensus 11 V~lGsp~tAsC~I--~e~C~~~~ 31 (94)
T d2d9qb1 11 VHLGDPITASCII--KQNCSHLD 31 (94)
T ss_dssp ECTTCCEEEEECC--CTTSCSSC
T ss_pred EeCCCCEEEEEEE--CccccCcC
Confidence 5678999999999 58898665
No 117
>d1jmva_ c.26.2.4 (A:) Universal stress protein A, UspA {Haemophilus influenzae [TaxId: 727]}
Probab=20.74 E-value=30 Score=22.70 Aligned_cols=31 Identities=23% Similarity=0.281 Sum_probs=19.2
Q ss_pred EEEEeCCCCChHHHHHHHHHHHHHHhcCCCccC
Q psy13262 197 LLLTGPNMGGKSTVMRQLGLITILAQMENPQLI 229 (229)
Q Consensus 197 ~~ltGpN~~GKStlLk~i~l~~~ma~~G~~v~~ 229 (229)
++|.|..+-+..-+..+. -.++-++.+||++
T Consensus 105 liV~G~~~~~~~~lgs~~--~~li~~~~~pVli 135 (140)
T d1jmva_ 105 LLVTGHHQDFWSKLMSST--RQVMNTIKIDMLV 135 (140)
T ss_dssp EEEEEECCCCHHHHHHHH--HHHHTTCCSEEEE
T ss_pred EEEeccCCCCCCCcccHH--HHHHhccCCCEEE
Confidence 555687666544322222 2588999999975
No 118
>d1gm5a3 c.37.1.19 (A:286-549) RecG helicase domain {Thermotoga maritima [TaxId: 2336]}
Probab=20.13 E-value=40 Score=25.97 Aligned_cols=27 Identities=30% Similarity=0.207 Sum_probs=19.1
Q ss_pred CcEEEEEeCCCCChHHHHHHHHHHHHH
Q psy13262 194 PTVLLLTGPNMGGKSTVMRQLGLITIL 220 (229)
Q Consensus 194 ~~~~~ltGpN~~GKStlLk~i~l~~~m 220 (229)
...-+|-|.-|||||...=..++.++.
T Consensus 104 ~m~rLL~GdvGSGKT~Va~~a~~~~~~ 130 (264)
T d1gm5a3 104 PMNRLLQGDVGSGKTVVAQLAILDNYE 130 (264)
T ss_dssp CCCCEEECCSSSSHHHHHHHHHHHHHH
T ss_pred cceeeeeccccccccHHHHHHHHHHHh
Confidence 356789999999999765444444443
Done!