BLASTP 2.2.26 [Sep-21-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Reference for compositional score matrix adjustment: Altschul, Stephen F.,
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.
Query= psy13263
(577 letters)
Database: nr
23,463,169 sequences; 8,064,228,071 total letters
Searching..................................................done
>gi|156549300|ref|XP_001600292.1| PREDICTED: probable DNA mismatch repair protein Msh6 [Nasonia
vitripennis]
Length = 1151
Score = 147 bits (371), Expect = 2e-32, Method: Compositional matrix adjust.
Identities = 80/194 (41%), Positives = 109/194 (56%), Gaps = 19/194 (9%)
Query: 63 PDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELEESV---EDPTPSSSEAEVTPMKNGN 119
P+D +D+G DEY P E + EE+L+ SV +P +S + + TP K
Sbjct: 100 PEDNSEDSG--DEYKP--------DESAESEEDLDLSVVSESEPNTASEDEDETPKKKQK 149
Query: 120 KRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHIL 179
+ + S + K A T + T S QDW H Y+FL D I
Sbjct: 150 MSNIKTPSRRGGGAKKSIAKKDSGTGQ------EQPTGKASDTQDWPHLKYEFLQKDKIR 203
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
D +R PDY+P+T+YVPP+FL KQTP M QWW +KS ++DCVLFFKVGKFYEL+HMD
Sbjct: 204 DNKKRRSTDPDYDPRTVYVPPDFLDKQTPAMRQWWVLKSDHYDCVLFFKVGKFYELYHMD 263
Query: 240 AVIGADELACSYMK 253
AV G +EL+ ++M+
Sbjct: 264 AVTGVNELSLTFMR 277
Score = 103 bits (256), Expect = 3e-19, Method: Compositional matrix adjust.
Identities = 57/142 (40%), Positives = 79/142 (55%), Gaps = 8/142 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRND 448
RGT T DG IA +E +I C T+F+THYH++ + NV +M+ +E D
Sbjct: 1009 RGTSTYDGTAIAASVVEALTKIQCRTLFSTHYHTLVEDYKMNKNVTLAHMACMVESDDED 1068
Query: 449 GI--DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
I + + FLYKL G CPKS+GFN A LAG+P + K ++A ++EA NLR H
Sbjct: 1069 QISEENVTFLYKLSEGACPKSYGFNAARLAGVPASITKRAQSIATKLEAEVNLR----HA 1124
Query: 507 FASLVKSGEKVDVEEL-QKALE 527
F +L K + V+ L QK E
Sbjct: 1125 FTALCKITDSTAVKPLFQKGFE 1146
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 275 PSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRT 334
P G FP++ E L +F+ AF+H+EA G I+PK GVD+EYD V+ E+ I+KE+ +YL
Sbjct: 703 PEGDFPELRETLDHFKTAFNHEEAKKEGFIVPKHGVDREYDAVLMELADIKKELDSYLEK 762
Query: 335 QCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
Q HFG + + K K++ +EVP K S ++ + +K + Y T E +
Sbjct: 763 QRKHFGVQIKFCGNDK--KRFQIEVPESQIKKVGSGYE-LQGSRKGFKRYYTEESK 815
>gi|355704543|gb|AES02262.1| mutS-like protein 6 [Mustela putorius furo]
Length = 1278
Score = 144 bits (364), Expect = 9e-32, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 124/244 (50%), Gaps = 25/244 (10%)
Query: 31 SPAKSEDDS----------PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPK 80
S KSEDD P + RR S + K + SDSE D GS+ E+ P
Sbjct: 133 SSGKSEDDDHEIESEEEVRPKVQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDG 188
Query: 81 AEVESESEHSSGEEELE-ESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAP 139
E S E SSG + + E ++ P +S+ + NG+ + SS+ P + T
Sbjct: 189 KEEGSSDEISSGVGDSDSEGLDSPVKVASKRKKMVTGNGSLKRKSSRKEMPLATKRSTGI 248
Query: 140 ST---PSTPSFPVSDTSETTPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHP 189
S+ + +F SE+ SG D W H ++L D D RR P HP
Sbjct: 249 SSETKSALNAFSAPQNSESQAHVSGGCDDNSRPTIWYHETLEWLKEDKRRDLQRRRPDHP 308
Query: 190 DYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELAC 249
D++ TLYVP +FL TP M +WW IKSQNFD V+F+KVGKFYEL+HMDA+IG +EL
Sbjct: 309 DFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVNELGL 368
Query: 250 SYMK 253
+MK
Sbjct: 369 VFMK 372
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/144 (35%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1136 RGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1195
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE++++ G A + E +LF +
Sbjct: 1196 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEIIQKGHRKAREFEKMTQSLRLF--R 1253
Query: 507 FASLVKSGEKVDVEELQKALESVK 530
L +D E + K L +K
Sbjct: 1254 EVCLASERSTLDAEAVPKLLTLIK 1277
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 75/136 (55%), Gaps = 3/136 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E +S +L Q+ +++TP G FPD++ L ++ AFDH++A G I PKAG D
Sbjct: 794 MEEIADNFKSKILKQVITLQTKTPQGRFPDLTIELNRWDTAFDHEKARKTGLITPKAGFD 853
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +I+ E+ + YL Q + GC T++Y + +Y LE+P + ++
Sbjct: 854 SDYDQALADIRENEQSLLEYLEKQRSRIGCRTIVYWGIGR--NRYQLEIPENFITRNLPE 911
Query: 371 HQRVATKKKNVENYVT 386
+ + KK + Y T
Sbjct: 912 EYELKSTKKGCKRYWT 927
>gi|395829624|ref|XP_003787949.1| PREDICTED: DNA mismatch repair protein Msh6-like isoform 3
[Otolemur garnettii]
Length = 1228
Score = 142 bits (359), Expect = 3e-31, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 119/224 (53%), Gaps = 14/224 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 103 PKTQGSRRSSRQIKKLRVISDSESDI----GGSDVEFKPDAKEEGSSDEISSGVGDSESE 158
Query: 99 SVEDPTPSSSEAEVTPMKNG-NKRGLSSKSGQPTKKPKLTAPSTPSTPS-FPVSDTSETT 156
++ P + + + NG +KR S K TK+ + T ST S F SE+
Sbjct: 159 GLDSPVKVARKRKRMITGNGSHKRKGSRKEMPSTKRATGISSETKSTLSAFSAPQNSESQ 218
Query: 157 PSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPC 209
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 219 AHVSGGGDDSSRPTIWYHETLEWLKKEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPG 278
Query: 210 MGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+F+KVGKFYEL+HMDA+IG +EL +MK
Sbjct: 279 MRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVNELGLVFMK 322
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1085 RGTATFDGTAIASAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1144
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1145 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 1202
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L + VD E + K L +K
Sbjct: 1203 EVCLASERKTVDAEAVHKLLTLIKEL 1228
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ ++++ G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 751 KSKILKQIITLKTKSSQGHFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 810
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q GC T++Y + +Y LE+P + ++ + + K
Sbjct: 811 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPEEYELKSTK 868
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 869 KGCKRYWT 876
>gi|395829620|ref|XP_003787947.1| PREDICTED: DNA mismatch repair protein Msh6-like isoform 1
[Otolemur garnettii]
Length = 1358
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/224 (40%), Positives = 119/224 (53%), Gaps = 14/224 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 233 PKTQGSRRSSRQIKKLRVISDSESDI----GGSDVEFKPDAKEEGSSDEISSGVGDSESE 288
Query: 99 SVEDPTPSSSEAEVTPMKNG-NKRGLSSKSGQPTKKPKLTAPSTPSTPS-FPVSDTSETT 156
++ P + + + NG +KR S K TK+ + T ST S F SE+
Sbjct: 289 GLDSPVKVARKRKRMITGNGSHKRKGSRKEMPSTKRATGISSETKSTLSAFSAPQNSESQ 348
Query: 157 PSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPC 209
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 349 AHVSGGGDDSSRPTIWYHETLEWLKKEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPG 408
Query: 210 MGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+F+KVGKFYEL+HMDA+IG +EL +MK
Sbjct: 409 MRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVNELGLVFMK 452
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1215 RGTATFDGTAIASAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1274
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1275 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 1332
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L + VD E + K L +K
Sbjct: 1333 EVCLASERKTVDAEAVHKLLTLIKEL 1358
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ ++++ G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 881 KSKILKQIITLKTKSSQGHFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 940
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q GC T++Y + +Y LE+P + ++ + + K
Sbjct: 941 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPEEYELKSTK 998
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 999 KGCKRYWT 1006
>gi|350419676|ref|XP_003492265.1| PREDICTED: probable DNA mismatch repair protein Msh6-like [Bombus
impatiens]
Length = 1129
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 78/192 (40%), Positives = 109/192 (56%), Gaps = 27/192 (14%)
Query: 62 EPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKR 121
+P+D +D+ S E V +SE +S EE E+ ++ + E++ MKN
Sbjct: 104 DPEDESEDSDSVSEGVS-----KSEPPTASEEESPEKKIKLAKAPRRKPEISTMKN---- 154
Query: 122 GLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDA 181
+K + KP+ ++T S S + W H Y FL P+ I D
Sbjct: 155 ---TKDAKKESKPQ---------------QQNQTKGSDSVTESWPHLKYDFLQPNKIRDI 196
Query: 182 DRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAV 241
R+ P PDY+PKTLYVPP+FL +QTP M QWW +KS++FDCVLFFKVGKFYEL+HMDAV
Sbjct: 197 RRKPPSDPDYDPKTLYVPPDFLNQQTPAMRQWWELKSKHFDCVLFFKVGKFYELYHMDAV 256
Query: 242 IGADELACSYMK 253
I +E+ +YM+
Sbjct: 257 ISVNEINLTYMR 268
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRND 448
RGT T DG IA + ++ C T+F+THYHS+ + + +M+ +E++ D
Sbjct: 995 RGTSTYDGTAIAASVVNALTKLNCRTLFSTHYHSLVEDYKNTKEITLAHMACMVENEEQD 1054
Query: 449 GI--DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
+ +T+ FLYKL G CPKS+GFN A LAG+P + ++ ++E N + LF
Sbjct: 1055 EVSQETVTFLYKLSEGACPKSYGFNAARLAGVPSVITNRAHEISKKLEQETNYKHLF 1111
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/131 (35%), Positives = 75/131 (57%), Gaps = 6/131 (4%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+ST++++ E P G FP + E L YF+ AFDH+EA G I+PK GVD EYD V+
Sbjct: 678 KSTIVSRCTKIE---PDGEFPSLRESLDYFKTAFDHEEAKKVGCIVPKRGVDSEYDSVLI 734
Query: 320 EIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKK 379
E+ ++ + Q YL Q HFG V + + K K+Y +E+P K + ++ + +++K
Sbjct: 735 ELDDVKADAQEYLEKQKKHFGVKVTFHGSDK--KRYQIEIPDSQIKKIGAGYE-LQSQRK 791
Query: 380 NVENYVTPECR 390
+ Y T E +
Sbjct: 792 GYKRYYTAETK 802
>gi|383847693|ref|XP_003699487.1| PREDICTED: probable DNA mismatch repair protein Msh6-like
[Megachile rotundata]
Length = 1125
Score = 142 bits (358), Expect = 5e-31, Method: Compositional matrix adjust.
Identities = 91/253 (35%), Positives = 133/253 (52%), Gaps = 37/253 (14%)
Query: 18 STPASSKGKKT-SKSPAKSEDDSPVTKRPR----------------RKSAKRVKSAIQSD 60
STP SSK +K +K+P+K +++ V R R R +R+ I D
Sbjct: 31 STPKSSKEQKNKAKTPSKGKENKNVEDRKRVYKEDDENEEEENEPVRPKKRRL---IIPD 87
Query: 61 SEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNK 120
+ D D G DE+ P ES+S E E+V + + +V+ G +
Sbjct: 88 VDSGD---DTG--DEFKPENESEESDSGSEGVTESEPETVSEEESPEKKRKVSNNSRGRQ 142
Query: 121 RGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILD 180
+ K+G+ KK +S ++T S + + W H Y FL P+ I D
Sbjct: 143 GARTKKNGKEDKKES------------KLSQQNQTQSSNNVVESWPHLKYDFLQPNKIRD 190
Query: 181 ADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDA 240
+R+ PDY+PKT+YVP +FL +QTP M QWW +KS+++DCVLFFKVGKFYEL+HMDA
Sbjct: 191 INRKPLSDPDYDPKTVYVPQDFLNQQTPAMRQWWELKSKHYDCVLFFKVGKFYELYHMDA 250
Query: 241 VIGADELACSYMK 253
V+G +EL +YM+
Sbjct: 251 VVGVNELNLTYMR 263
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG IA ++ ++ C T+F+THYHS+ + + ++ +M+ + + +G
Sbjct: 991 RGTSTYDGTAIAASVVDALTKLKCRTLFSTHYHSLVEDYKNKKDITLAHMACMVENEEEG 1050
Query: 450 ---IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
+T+ FLYKL G CPKS+GFN A LAG+P + G ++ ++E N +QLF
Sbjct: 1051 EVSQETVTFLYKLSEGACPKSYGFNAARLAGVPLVITNRGHEISKKLEKETNQKQLF 1107
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 74/130 (56%), Gaps = 6/130 (4%)
Query: 261 STLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDE 320
+ L+T+ E P G FP + E L YF+ AFDH+EA G I+PK GVD EYD V+ E
Sbjct: 675 TALITRCTKIE---PDGEFPSLRETLDYFKTAFDHEEAKKVGCIVPKKGVDAEYDSVLME 731
Query: 321 IKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKN 380
+ ++K+ + YL Q HFG V + + K K+Y +E+P K S ++ + +++K
Sbjct: 732 LSDVKKDAEQYLEKQKQHFGVKVTFFGSDK--KRYQIEIPDSQVKKVGSGYE-LTSQRKG 788
Query: 381 VENYVTPECR 390
+ Y T E +
Sbjct: 789 YKRYYTAEAK 798
>gi|6754744|ref|NP_034960.1| DNA mismatch repair protein Msh6 [Mus musculus]
gi|341940990|sp|P54276.3|MSH6_MOUSE RecName: Full=DNA mismatch repair protein Msh6; AltName: Full=G/T
mismatch-binding protein; Short=GTBP; Short=GTMBP;
AltName: Full=MutS-alpha 160 kDa subunit; AltName:
Full=p160
gi|2665637|gb|AAB88445.1| mismatch repair protein MSH6 [Mus musculus]
gi|30109297|gb|AAH51160.1| MutS homolog 6 (E. coli) [Mus musculus]
gi|30185718|gb|AAH51634.1| MutS homolog 6 (E. coli) [Mus musculus]
Length = 1358
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 118/230 (51%), Gaps = 18/230 (7%)
Query: 36 EDDSPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSG--- 92
E+ P + PRR S + K + SDSE D GS+ E+ P + S + SSG
Sbjct: 229 EEAQPSVQGPRRSSRQVKKRRVISDSESDI----GGSDVEFKPDTKQEGSSDDASSGVGD 284
Query: 93 -EEELEESVEDPTPSSSEAEVTPMKNGNKR-GLSSKSGQPTKKPKLTAPSTPSTPSFPVS 150
+ E + P A V + G +R L ++G + + + + + +F
Sbjct: 285 SDSEDLGTFGKGAPKRKRAMVA--QGGLRRKSLKKETGSAKRATPILSETKSTLSAFSAP 342
Query: 151 DTSETTPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFL 203
SE+ SG + W H ++L P+ D RR P HP++NP TLYVP EFL
Sbjct: 343 QNSESQTHVSGGGNDSSGPTVWYHETLEWLKPEKRRDEHRRRPDHPEFNPTTLYVPEEFL 402
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
TP M +WW +KSQNFD V+F+KVGKFYEL+HMDAVIG EL +MK
Sbjct: 403 NSCTPGMRKWWQLKSQNFDLVIFYKVGKFYELYHMDAVIGVSELGLIFMK 452
Score = 86.3 bits (212), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1215 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSKSVCVRLGHMACMVENECE 1274
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + QLF
Sbjct: 1275 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFERMNQSLQLF 1331
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Query: 261 STLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDE 320
S L Q+ +S++P G FPD++ L+ ++ AFDH++A G I PKAG D +YD+ + +
Sbjct: 881 SKTLKQVVTLQSKSPKGRFPDLTAELQRWDTAFDHEKARKTGLITPKAGFDSDYDQALAD 940
Query: 321 IKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKK 379
I+ E+ + YL Q + GC +++Y + +Y LE+P +A++ + + KK
Sbjct: 941 IRENEQSLLEYLDKQRSRLGCKSIVYWGIGR--NRYQLEIPENFATRNLPEEYELKSTKK 998
Query: 380 NVENYVT 386
+ Y T
Sbjct: 999 GCKRYWT 1005
>gi|26353224|dbj|BAC40242.1| unnamed protein product [Mus musculus]
Length = 1358
Score = 140 bits (354), Expect = 1e-30, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 118/230 (51%), Gaps = 18/230 (7%)
Query: 36 EDDSPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSG--- 92
E+ P + PRR S + K + SDSE D GS+ E+ P + S + SSG
Sbjct: 229 EEAQPSVQGPRRSSRQVKKRRVISDSESDI----GGSDVEFKPDTKQEGSSDDASSGVGD 284
Query: 93 -EEELEESVEDPTPSSSEAEVTPMKNGNKR-GLSSKSGQPTKKPKLTAPSTPSTPSFPVS 150
+ E + P A V + G +R L ++G + + + + + +F
Sbjct: 285 SDSEDLGTFGKGAPKRKRAMVA--QGGLRRKSLKKETGSAKRATPILSETKSTLSAFSAP 342
Query: 151 DTSETTPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFL 203
SE+ SG + W H ++L P+ D RR P HP++NP TLYVP EFL
Sbjct: 343 QNSESQTHVSGGGNDSSGPTVWYHETLEWLKPEKRRDEHRRRPDHPEFNPTTLYVPEEFL 402
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
TP M +WW +KSQNFD V+F+KVGKFYEL+HMDAVIG EL +MK
Sbjct: 403 NSCTPGMRKWWQLKSQNFDLVIFYKVGKFYELYHMDAVIGVSELGLIFMK 452
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1215 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSKSVCVRLGHMACMVENECE 1274
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + QLF
Sbjct: 1275 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFERMNQSLQLF 1331
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Query: 261 STLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDE 320
S L Q+ +S++P G FPD++ L+ ++ AFDH++A G I PKAG D +YD+ + +
Sbjct: 881 SKTLKQVVTLQSKSPKGRFPDLTAELQRWDTAFDHEKARKTGLITPKAGFDSDYDQALAD 940
Query: 321 IKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKK 379
I+ E+ + YL Q + GC +++Y + +Y LE+P +A++ + + KK
Sbjct: 941 IRENEQSLLEYLDKQRSRLGCKSIVYWGIGR--NRYQLEIPENFATRNLPEEYELKSTKK 998
Query: 380 NVENYVT 386
+ Y T
Sbjct: 999 GCKRYWT 1005
>gi|148706690|gb|EDL38637.1| mCG15886 [Mus musculus]
Length = 1379
Score = 140 bits (354), Expect = 2e-30, Method: Compositional matrix adjust.
Identities = 85/230 (36%), Positives = 118/230 (51%), Gaps = 18/230 (7%)
Query: 36 EDDSPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSG--- 92
E+ P + PRR S + K + SDSE D GS+ E+ P + S + SSG
Sbjct: 250 EEAQPSVQGPRRSSRQVKKRRVISDSESDI----GGSDVEFKPDTKQEGSSDDASSGVGD 305
Query: 93 -EEELEESVEDPTPSSSEAEVTPMKNGNKR-GLSSKSGQPTKKPKLTAPSTPSTPSFPVS 150
+ E + P A V + G +R L ++G + + + + + +F
Sbjct: 306 SDSEDLGTFGKGAPKRKRAMVA--QGGLRRKSLKKETGSAKRATPILSETKSTLSAFSAP 363
Query: 151 DTSETTPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFL 203
SE+ SG + W H ++L P+ D RR P HP++NP TLYVP EFL
Sbjct: 364 QNSESQTHVSGGGNDSSGPTVWYHETLEWLKPEKRRDEHRRRPDHPEFNPTTLYVPEEFL 423
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
TP M +WW +KSQNFD V+F+KVGKFYEL+HMDAVIG EL +MK
Sbjct: 424 NSCTPGMRKWWQLKSQNFDLVIFYKVGKFYELYHMDAVIGVSELGLIFMK 473
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1236 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSKSVCVRLGHMACMVENECE 1295
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + QLF
Sbjct: 1296 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFERMNQSLQLF 1352
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Query: 261 STLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDE 320
S L Q+ +S++P G FPD++ L+ ++ AFDH++A G I PKAG D +YD+ + +
Sbjct: 902 SKTLKQVVTLQSKSPKGRFPDLTAELQRWDTAFDHEKARKTGLITPKAGFDSDYDQALAD 961
Query: 321 IKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKK 379
I+ E+ + YL Q + GC +++Y + +Y LE+P +A++ + + KK
Sbjct: 962 IRENEQSLLEYLDKQRSRLGCKSIVYWGIGR--NRYQLEIPENFATRNLPEEYELKSTKK 1019
Query: 380 NVENYVT 386
+ Y T
Sbjct: 1020 GCKRYWT 1026
>gi|301753267|ref|XP_002912469.1| PREDICTED: DNA mismatch repair protein Msh6-like [Ailuropoda
melanoleuca]
gi|281352643|gb|EFB28227.1| hypothetical protein PANDA_000220 [Ailuropoda melanoleuca]
Length = 1362
Score = 139 bits (350), Expect = 4e-30, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 118/225 (52%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P + RR S + K + SDSE D GS+ E+ P E S E SSG + + E
Sbjct: 234 PKVQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDAKEEGSSDELSSGVGDSDSE 289
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPST---PSTPSFPVSDTSET 155
+E P +S+ + NG+ + SS+ P + T S+ + +F SE+
Sbjct: 290 GLESPVKVASKRKKMVTGNGSLKRKSSRKEMPLATKRSTGISSETKSALNAFSAPQNSES 349
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 350 QAHISGGCDDSSRPTVWYHETLEWLKEEKRRDLHRRRPDHPDFDASTLYVPEDFLNSCTP 409
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+F+KVGKFYEL+HMDA+IG ++L +MK
Sbjct: 410 GMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVNKLGLVFMK 454
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1219 RGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1278
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E +LF +
Sbjct: 1279 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMTQSLRLF--R 1336
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L +D E + K L +K
Sbjct: 1337 EVCLASERSTLDAEAVPKLLTLIKEL 1362
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ +++TP G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 884 KSKILKQVVTLQTKTPEGRFPDLTLELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 943
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+IK E+ + YL Q + GC T++Y + +Y LE+P + ++ + + K
Sbjct: 944 DIKENEQSLLEYLEKQRSRIGCRTIVYWGIGR--NRYQLEIPENFITRNLPEEYELKSTK 1001
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 1002 KGCKRYWT 1009
>gi|340713019|ref|XP_003395049.1| PREDICTED: probable DNA mismatch repair protein Msh6-like [Bombus
terrestris]
Length = 1130
Score = 138 bits (348), Expect = 7e-30, Method: Compositional matrix adjust.
Identities = 58/101 (57%), Positives = 74/101 (73%)
Query: 153 SETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQ 212
++T S S + W H Y FL P+ I D R+ P PDY+PKTLYVP +FL +QTP M Q
Sbjct: 169 NQTKGSDSVTESWPHLKYDFLQPNKIRDIRRKPPSDPDYDPKTLYVPQDFLNQQTPAMRQ 228
Query: 213 WWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
WW +KS++FDCVLFFKVGKFYEL+HMDAVI +E+ +YM+
Sbjct: 229 WWELKSKHFDCVLFFKVGKFYELYHMDAVISVNEINLTYMR 269
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRND 448
RGT T DG IA + ++ C T+F+THYHS+ + + +M+ +E++ D
Sbjct: 996 RGTSTYDGTAIAASVVNALTKLNCRTLFSTHYHSLVEDYKNTKEITLAHMACMVENEEQD 1055
Query: 449 GI--DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
+ +T+ FLYKL G CPKS+GFN A LAG+P + ++ ++E N + LF
Sbjct: 1056 EVSQETVTFLYKLSEGACPKSYGFNAARLAGVPSVITNRAHEISKKLEQETNYKHLF 1112
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 75/131 (57%), Gaps = 6/131 (4%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+ST++++ E P G FP + E L YF+ AFDH+EA G ++PK GVD EYD V+
Sbjct: 679 KSTIVSRCTKIE---PDGEFPSLRESLDYFKTAFDHEEAKKVGCVVPKRGVDSEYDSVLI 735
Query: 320 EIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKK 379
E+ ++ + Q YL Q HFG V + + K K+Y +E+P K + ++ + +++K
Sbjct: 736 ELDDVKADAQQYLEKQKKHFGVKVAFHGSDK--KRYQIEIPDSQIKKIGAGYE-LQSQRK 792
Query: 380 NVENYVTPECR 390
+ Y T E +
Sbjct: 793 GYKRYYTAETK 803
>gi|402890846|ref|XP_003908684.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 2 [Papio
anubis]
Length = 1230
Score = 138 bits (347), Expect = 8e-30, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 115/225 (51%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 103 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGDSESE 158
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPS---TPSFPVSDTSET 155
P + + + NG+ + SS+ P+ + T S+ + +F SE+
Sbjct: 159 GPNSPVKVARKRKRVVTGNGSLKRKSSRKEMPSATKRATGISSETKNTLSAFSAPQNSES 218
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD+N TLYVP +FL TP
Sbjct: 219 QAHVSGGGDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFNASTLYVPEDFLNSCTP 278
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 279 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMK 323
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1087 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1146
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1147 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 1204
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L +K
Sbjct: 1205 EVCLASERSTVDAEAVHKLLTLIKEL 1230
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 753 KSKILKQVISLQTKNPEGRFPDLTTELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 812
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q GC T++Y + +Y LE+P + ++ + + K
Sbjct: 813 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPEEYELKSTK 870
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 871 KGCKRYWT 878
>gi|293347880|ref|XP_002726765.1| PREDICTED: DNA mismatch repair protein Msh6-like [Rattus
norvegicus]
gi|149050458|gb|EDM02631.1| rCG61559 [Rattus norvegicus]
Length = 1361
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 117/224 (52%), Gaps = 14/224 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P + PRR S + K + SDSE D GS+ E+ P + S E SSG + + E
Sbjct: 236 PNAQGPRRSSRQVKKRRVISDSESDI----GGSDVEFKPDSKQEGSSDEVSSGVGDSDSE 291
Query: 99 SVEDPTPSSSEAEVTPMKNGN--KRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETT 156
+ + + + T +G ++ L ++G + ++ + + + +F SE+
Sbjct: 292 GLGSFGKGAPKRKRTVAAHGGLKRKSLKKETGSAKQATRILSETKSTLSAFCAPQNSESQ 351
Query: 157 PSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPC 209
G + W H ++L P+ D +RR P HPDYN TLYVP +FL TP
Sbjct: 352 THVCGGGNDSSGPTIWYHETLEWLKPEKRRDENRRRPDHPDYNSSTLYVPEDFLNSCTPG 411
Query: 210 MGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW KSQNFD V+F+KVGKFYEL+HMDAVIG EL +MK
Sbjct: 412 MRRWWQFKSQNFDLVIFYKVGKFYELYHMDAVIGVSELGLIFMK 455
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1218 RGTATFDGTAIASAVVKELAETIKCRTLFSTHYHSLVEDYSKNVCVRLGHMACMVENECE 1277
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + QLF
Sbjct: 1278 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFERMNQALQLF 1334
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S L Q+ ++++P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 883 KSKTLKQVVTLQTKSPKGRFPDLTAELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 942
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q + GC ++Y + +Y LE+P +A++ + + K
Sbjct: 943 DIRENEQSLLEYLDKQRSRIGCRNIVYWGIGR--NRYQLEIPENFATRNLPEEYELKSTK 1000
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 1001 KGCKRYWT 1008
>gi|296223907|ref|XP_002807586.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
Msh6-like, partial [Callithrix jacchus]
Length = 1223
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 89/225 (39%), Positives = 117/225 (52%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG E E E
Sbjct: 96 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGESESE 151
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQP--TKKPKLTAPSTPSTPS-FPVSDTSET 155
+ P + + + NG+ + SS+ P TK+ + T +T S F SE+
Sbjct: 152 GLNSPVKVARKRKRMATGNGSLKRKSSRKEAPSATKRAIGISSETKNTLSAFSAPQNSES 211
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 212 QAHVSGGGDDSSRPTVWYHETLEWLKDEKRRDEHRRRPDHPDFDGSTLYVPEDFLNSCTP 271
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 272 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMK 316
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1080 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1139
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1140 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 1197
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L +K
Sbjct: 1198 EVCLASERSTVDAEAVHKLLTLIKEL 1223
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 746 KSKILKQVISLQTKNPEGRFPDLTIELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 805
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q GC T++Y + +Y LE+P + ++ + + K
Sbjct: 806 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPEEYELKSTK 863
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 864 KGCKRYWT 871
>gi|410954737|ref|XP_003984018.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 2 [Felis catus]
Length = 1228
Score = 138 bits (347), Expect = 9e-30, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 119/225 (52%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P + RR S + K + SDSE D GS+ E+ P E S E SSG + + E
Sbjct: 101 PKVQGSRRSSRQIKKRRVISDSESDV----GGSDVEFKPDAKEEGSSDEISSGVGDSDSE 156
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQP--TKKPKLTAPSTPSTPS-FPVSDTSET 155
++ P +S+ + NG + SS+ P TK+ + T ST S F SE+
Sbjct: 157 GLDSPVKVASKRKKMVSGNGALKRKSSRKEMPLATKRSTGISSETKSTLSAFSAPQNSES 216
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
T G + W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 217 QAHTGGGCEDSSRPTFWYHETLEWLKEEKRRDLHRRRPDHPDFDASTLYVPEDFLNSCTP 276
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+F+KVGKFYEL+HMDA++G +EL +MK
Sbjct: 277 GMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALVGVNELGLVFMK 321
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1085 RGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1144
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A+LA +PE++++ G A + E +LF +
Sbjct: 1145 DPSQETITFLYKFIKGACPKSYGFNAAKLANLPEEIIQKGHRKAREFEKMTQSLRLF--R 1202
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L +D E + K L +K
Sbjct: 1203 EVCLASERSTIDAEAVPKLLTLIKEL 1228
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E +S +L Q+ +++ P G FPD++ L ++ AFDH++A G I PKAG D
Sbjct: 742 MEEVADNFKSKILKQVITLQTKNPEGRFPDLTIELNRWDTAFDHEKARRTGLITPKAGFD 801
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +I+ E+ + YL Q + GC T++Y + +Y LE+P + ++
Sbjct: 802 PDYDQALADIRENEQSLLEYLEKQRSRIGCRTIVYWGIGR--NRYQLEIPENFITRNLPE 859
Query: 371 HQRVATKKKNVENYVT 386
+ + KK + Y T
Sbjct: 860 EYELKSTKKGCKRYWT 875
>gi|300794942|ref|NP_001179666.1| DNA mismatch repair protein Msh6 [Bos taurus]
gi|296482664|tpg|DAA24779.1| TPA: mutS homolog 6 [Bos taurus]
Length = 1360
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 117/225 (52%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P + RR S + K + SDSE D GS+ E+ P E S E SSG + + E
Sbjct: 232 PKVQGSRRSSRQIKKRRVISDSESDV----GGSDVEFKPDTKEEASSDEISSGVGDSDSE 287
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPS---TPSFPVSDTSET 155
++ P + + + NG+ + SS+ P+ + T S+ + +F V SE
Sbjct: 288 GLDTPVKVAPKRKRMVTGNGSLKRKSSRKEMPSATKRATGISSETKNTLSAFSVPQNSEP 347
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 348 QAHISGGCDDSNRPTVWYHETLEWLKEEKRRDVHRRRPDHPDFDASTLYVPEDFLNSCTP 407
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+F+KVGKFYE++HMDA+IG EL +MK
Sbjct: 408 GMRKWWQIKSQNFDLVIFYKVGKFYEMYHMDALIGVSELGLVFMK 452
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1217 RGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1276
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E +LF +
Sbjct: 1277 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMTQSLRLF--R 1334
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD + + K L ++
Sbjct: 1335 EVCLASERSTVDADAVHKLLTLIEEL 1360
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ ++++P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 882 KSKILKQVLTLQTKSPEGRFPDLTSELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 941
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q + GC T++Y + +Y LE+P + ++ + + K
Sbjct: 942 DIRENEQSLLEYLEKQRSRIGCRTIVYWGIGR--NRYQLEIPENFITRNLPEEYELKSTK 999
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 1000 KGCKRYWT 1007
>gi|392348628|ref|XP_002729643.2| PREDICTED: DNA mismatch repair protein Msh6-like [Rattus
norvegicus]
Length = 1361
Score = 138 bits (347), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 81/224 (36%), Positives = 117/224 (52%), Gaps = 14/224 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P + PRR S + K + SDSE D GS+ E+ P + S E SSG + + E
Sbjct: 236 PNAQGPRRSSRQVKKRRVISDSESDI----GGSDVEFKPDSKQEGSSDEVSSGVGDSDSE 291
Query: 99 SVEDPTPSSSEAEVTPMKNGN--KRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETT 156
+ + + + T +G ++ L ++G + ++ + + + +F SE+
Sbjct: 292 GLGSFGKGAPKRKRTVAAHGGLKRKSLKKETGSAKQATRILSETKSTLSAFCAPQNSESQ 351
Query: 157 PSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPC 209
G + W H ++L P+ D +RR P HPDYN TLYVP +FL TP
Sbjct: 352 THVCGGGNDSSGPTIWYHETLEWLKPEKRRDENRRRPDHPDYNSSTLYVPEDFLNSCTPG 411
Query: 210 MGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW KSQNFD V+F+KVGKFYEL+HMDAVIG EL +MK
Sbjct: 412 MRRWWQFKSQNFDLVIFYKVGKFYELYHMDAVIGVSELGLIFMK 455
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1218 RGTATFDGTAIASAVVKELAETIKCRTLFSTHYHSLVEDYSKNVCVRLGHMACMVENECE 1277
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + QLF
Sbjct: 1278 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFERMNQALQLF 1334
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S L Q+ ++++P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 883 KSKTLKQVVTLQTKSPKGRFPDLTAELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 942
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q + GC ++Y + +Y LE+P +A++ + + K
Sbjct: 943 DIRENEQSLLEYLDKQRSRIGCRNIVYWGIGR--NRYQLEIPENFATRNLPEEYELKSTK 1000
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 1001 KGCKRYWT 1008
>gi|443734709|gb|ELU18590.1| hypothetical protein CAPTEDRAFT_214274 [Capitella teleta]
Length = 440
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 89/249 (35%), Positives = 130/249 (52%), Gaps = 31/249 (12%)
Query: 25 GKKTSKSPAKSEDDSPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVE 84
G +P KS SP+ K + K K I ++ +D+ + SED++ P ++
Sbjct: 152 GSSKENTPKKSPIKSPLKKTRSGRQPKTKKRRIIENNSDEDLSE---SEDDFKP--GIID 206
Query: 85 SESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSG-------------QPT 131
S S+ S E+VE P ++ +P+K KR S+ P+
Sbjct: 207 SSSDDES------EAVESSEPDTASESESPVKQKRKRNHDSQPSPMLKPSRTLQSFMTPS 260
Query: 132 KKPKLTAPSTPSTPSFPVSD----TSETTPSTSGAQD---WSHNHYQFLHPDHILDADRR 184
KP P TPS +S ++ TPST A+D + H FL P+ + DA++R
Sbjct: 261 PKPNSEKPFTPSVGDRTISKLAAFSAPDTPSTPSAEDGRVYPHMTEDFLQPEKMRDAEKR 320
Query: 185 SPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGA 244
+ HP+Y+ +T+YVP FL KQTP M QWW +K+++FD +LFFK+GKFYELFHMDA I
Sbjct: 321 TRDHPEYDARTIYVPDAFLNKQTPAMRQWWQLKAKHFDTILFFKMGKFYELFHMDATIAV 380
Query: 245 DELACSYMK 253
+EL YMK
Sbjct: 381 NELGLIYMK 389
>gi|440906162|gb|ELR56463.1| DNA mismatch repair protein Msh6 [Bos grunniens mutus]
Length = 1361
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 84/225 (37%), Positives = 117/225 (52%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P + RR S + K + SDSE D GS+ E+ P E S E SSG + + E
Sbjct: 233 PKVQGSRRSSRQIKKRRVISDSESDV----GGSDVEFKPDTKEEASSDEISSGVGDSDSE 288
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPS---TPSFPVSDTSET 155
++ P + + + NG+ + SS+ P+ + T S+ + +F V SE
Sbjct: 289 GLDTPVKVAPKRKRMVTGNGSLKRKSSRKEMPSATKRATGISSETKNTLSAFSVPQNSEP 348
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 349 QAHISGGCDDSNRPTVWYHETLEWLKEEKRRDVHRRRPDHPDFDASTLYVPEDFLNSCTP 408
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+F+KVGKFYE++HMDA+IG EL +MK
Sbjct: 409 GMRKWWQIKSQNFDLVIFYKVGKFYEMYHMDALIGVSELGLVFMK 453
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1218 RGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1277
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E +LF +
Sbjct: 1278 DPSQETITFLYKFINGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMTQSLRLF--R 1335
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD + + K L ++
Sbjct: 1336 EVCLASERSTVDADAVHKLLTLIEEL 1361
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ ++++P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 883 KSKILKQVLTLQTKSPEGRFPDLTSELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 942
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q + GC T++Y + +Y LE+P + ++ + + K
Sbjct: 943 DIRENEQSLLEYLEKQRSRIGCRTIVYWGIGR--NRYQLEIPENFITRNLPEEYELKSTK 1000
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 1001 KGCKRYWT 1008
>gi|332226866|ref|XP_003262610.1| PREDICTED: DNA mismatch repair protein Msh6, partial [Nomascus
leucogenys]
Length = 1290
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 117/225 (52%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 163 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGDSESE 218
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPS---FPVSDTSET 155
+ P + + + NG+ + SS+ P+ + T+ S+ + + F SE+
Sbjct: 219 GLNSPVKVARKRKRMVTGNGSLKRKSSRKETPSATKRATSISSETKNTLRVFSAPQNSES 278
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 279 QAHISGGGDDSSRPTVWYHESLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTP 338
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 339 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMK 383
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1147 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1206
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1207 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 1264
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L +K
Sbjct: 1265 EVCLASERSTVDAEAVHKLLTLIKEL 1290
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 813 KSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 872
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q GC T++Y + +Y LE+P + ++ + + K
Sbjct: 873 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPEEYELKSTK 930
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 931 KGCKRYWT 938
>gi|402890844|ref|XP_003908683.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 1 [Papio
anubis]
Length = 1360
Score = 137 bits (346), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 115/225 (51%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 233 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGDSESE 288
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPS---TPSFPVSDTSET 155
P + + + NG+ + SS+ P+ + T S+ + +F SE+
Sbjct: 289 GPNSPVKVARKRKRVVTGNGSLKRKSSRKEMPSATKRATGISSETKNTLSAFSAPQNSES 348
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD+N TLYVP +FL TP
Sbjct: 349 QAHVSGGGDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFNASTLYVPEDFLNSCTP 408
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 409 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMK 453
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1217 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1276
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1277 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 1334
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L +K
Sbjct: 1335 EVCLASERSTVDAEAVHKLLTLIKEL 1360
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 883 KSKILKQVISLQTKNPEGRFPDLTTELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 942
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q GC T++Y + +Y LE+P + ++ + + K
Sbjct: 943 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPEEYELKSTK 1000
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 1001 KGCKRYWT 1008
>gi|410954735|ref|XP_003984017.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 1 [Felis catus]
Length = 1359
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 119/225 (52%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P + RR S + K + SDSE D GS+ E+ P E S E SSG + + E
Sbjct: 232 PKVQGSRRSSRQIKKRRVISDSESDV----GGSDVEFKPDAKEEGSSDEISSGVGDSDSE 287
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQP--TKKPKLTAPSTPSTPS-FPVSDTSET 155
++ P +S+ + NG + SS+ P TK+ + T ST S F SE+
Sbjct: 288 GLDSPVKVASKRKKMVSGNGALKRKSSRKEMPLATKRSTGISSETKSTLSAFSAPQNSES 347
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
T G + W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 348 QAHTGGGCEDSSRPTFWYHETLEWLKEEKRRDLHRRRPDHPDFDASTLYVPEDFLNSCTP 407
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+F+KVGKFYEL+HMDA++G +EL +MK
Sbjct: 408 GMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALVGVNELGLVFMK 452
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1216 RGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1275
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A+LA +PE++++ G A + E +LF +
Sbjct: 1276 DPSQETITFLYKFIKGACPKSYGFNAAKLANLPEEIIQKGHRKAREFEKMTQSLRLF--R 1333
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L +D E + K L +K
Sbjct: 1334 EVCLASERSTIDAEAVPKLLTLIKEL 1359
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E +S +L Q+ +++ P G FPD++ L ++ AFDH++A G I PKAG D
Sbjct: 873 MEEVADNFKSKILKQVITLQTKNPEGRFPDLTIELNRWDTAFDHEKARRTGLITPKAGFD 932
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +I+ E+ + YL Q + GC T++Y + +Y LE+P + ++
Sbjct: 933 PDYDQALADIRENEQSLLEYLEKQRSRIGCRTIVYWGIGR--NRYQLEIPENFITRNLPE 990
Query: 371 HQRVATKKKNVENYVT 386
+ + KK + Y T
Sbjct: 991 EYELKSTKKGCKRYWT 1006
>gi|443734707|gb|ELU18588.1| hypothetical protein CAPTEDRAFT_139957, partial [Capitella teleta]
Length = 1270
Score = 137 bits (345), Expect = 1e-29, Method: Compositional matrix adjust.
Identities = 88/246 (35%), Positives = 131/246 (53%), Gaps = 33/246 (13%)
Query: 30 KSPAKSEDDSPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEH 89
++P KS SP+ K + K K I ++ +D+ + SED++ P + S+ E
Sbjct: 137 QTPKKSPIKSPLKKTRSGRQPKTKKRRIIENNSDEDLSE---SEDDFKPGIIDSSSDDE- 192
Query: 90 SSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLS-----------SKSGQ----PTKKP 134
E+VE P ++ +P+K+ KR + S++ Q P+ KP
Sbjct: 193 -------SEAVESSEPDTASESESPVKSQQKRKRNHDSQPSPMLKPSRTLQSFMTPSPKP 245
Query: 135 KLTAPSTPSTPSFPVSD----TSETTPSTSGAQD---WSHNHYQFLHPDHILDADRRSPK 187
P TPS +S ++ TPST A+D + H FL P + DA++R+
Sbjct: 246 NSEKPFTPSVGDRTISKLAAFSAPDTPSTPSAEDGRVYPHMIEDFLQPGKMRDAEKRTRD 305
Query: 188 HPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL 247
HP+Y+ +T+YVP FL KQTP M QWW +K+++FD +LFFK+GKFYELFHMDA I +EL
Sbjct: 306 HPEYDARTIYVPDAFLNKQTPAMRQWWQLKAKHFDTILFFKMGKFYELFHMDATIAVNEL 365
Query: 248 ACSYMK 253
YMK
Sbjct: 366 GLIYMK 371
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 50/135 (37%), Positives = 71/135 (52%), Gaps = 14/135 (10%)
Query: 391 GTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLR--EEPNVAFEYMS-YIEDKRN 447
GT T DG IA + + + C T+F+THYHS+ + +V +M+ +E+
Sbjct: 1119 GTATYDGTAIACAVVRELCERRCRTLFSTHYHSLVEEFSSSHDASVRLGHMACMVEEAPA 1178
Query: 448 DGID-------TIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK--FGTTVAFQMEARHN 498
D D T+ FLYK V G CPKS+GFN A+LAGIP +V+ G + AF+ N
Sbjct: 1179 DDTDSSDPSEETVTFLYKFVSGACPKSYGFNAAKLAGIPSEVISRAVGKSRAFE-STIQN 1237
Query: 499 LRQLFIHKFASLVKS 513
L LF + V+S
Sbjct: 1238 L-SLFRLRLTCFVES 1251
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 2/112 (1%)
Query: 277 GCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQC 336
G FPD++E L +FE +FD K+A + G I P GVD +YD + ++K +++++ YL Q
Sbjct: 803 GRFPDLTEQLDFFEQSFDQKKAKTEGVIKPSKGVDPDYDFALSDMKLVQQQLDDYLDKQK 862
Query: 337 AHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPE 388
+ GC I K ++ +E+P A K + ++ ++KK + + Y T E
Sbjct: 863 SRLGCRNIVFWGSGKN-RFQMEIPEGVAKKVPNEYELTSSKKGH-KRYRTRE 912
>gi|426335494|ref|XP_004029255.1| PREDICTED: DNA mismatch repair protein Msh6 [Gorilla gorilla
gorilla]
Length = 1230
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 117/225 (52%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 103 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGDSESE 158
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPS---TPSFPVSDTSET 155
+ P + + + NG+ + SS+ P+ + T+ S+ + +F SE+
Sbjct: 159 GLNSPVKVARKRKRMVTGNGSLKRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSES 218
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 219 QAHVSGGGDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTP 278
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 279 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMK 323
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1087 RGTATFDGTAIANAVVKELAETIQCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1146
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1147 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 1204
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L +K
Sbjct: 1205 EVCLASERSTVDAEAVHKLLTLIKEL 1230
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E +S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D
Sbjct: 745 MEEVADGFKSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFD 804
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +I+ E+ + YL Q GC T++Y + +Y LE+P + ++
Sbjct: 805 SDYDQALADIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPE 862
Query: 371 HQRVATKKKNVENYVT 386
+ + KK + Y T
Sbjct: 863 EYELKSTKKGCKRYWT 878
>gi|194375916|dbj|BAG57302.1| unnamed protein product [Homo sapiens]
Length = 1230
Score = 137 bits (345), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 117/225 (52%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 103 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGDSESE 158
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPS---TPSFPVSDTSET 155
+ P + + + NG+ + SS+ P+ + T+ S+ + +F SE+
Sbjct: 159 GLNSPVKVARKRKRMVTGNGSLKRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSES 218
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 219 QAHVSGGGDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTP 278
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 279 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMK 323
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1087 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1146
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1147 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 1204
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L +K
Sbjct: 1205 EVCLASERSTVDAEAVHKLLTLIKEL 1230
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E +S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D
Sbjct: 745 MEEVADGFKSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFD 804
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +I+ E+ + YL Q GC T++Y + +Y LE+P + ++
Sbjct: 805 SDYDQALADIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPE 862
Query: 371 HQRVATKKKNVENYVT 386
+ + KK + Y T
Sbjct: 863 EYELKSTKKGCKRYWT 878
>gi|24664545|ref|NP_648755.1| Msh6 [Drosophila melanogaster]
gi|13124364|sp|Q9VUM0.2|MSH6_DROME RecName: Full=Probable DNA mismatch repair protein Msh6
gi|10727920|gb|AAF49656.2| Msh6 [Drosophila melanogaster]
gi|211938707|gb|ACJ13250.1| LD20722p [Drosophila melanogaster]
Length = 1190
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 97/276 (35%), Positives = 136/276 (49%), Gaps = 32/276 (11%)
Query: 4 DSKESPEKKGDSESSTPASSKGKKTSKSPAKSE-----DDSPVTKRPRRKSAKRVKSAIQ 58
D S +K + ++ P GKK + PA DD P + + +RK R+ +
Sbjct: 39 DPDASKSEKENLQNQQPKVKDGKKEASKPAAKRKLPISDDEPASGQRKRK---RIVQP-E 94
Query: 59 SDSEPDDMLQDNGSEDE-------YVPPKAEVESESEHSSGEE----ELEESVEDPTPSS 107
SDSEP+ ++ SED+ Y P + E +S S EE E + SV+ PTP
Sbjct: 95 SDSEPE--MEVTKSEDDFSDCASDYEPDENEASDDSVSSGAEEVSPSENDMSVDSPTPKK 152
Query: 108 SEAEVTPMKNGNKRGLSSKSGQ----------PTKKPKLTAPSTPSTPSFPVSDTSETTP 157
S + + N N SSK + T + KL + + D T
Sbjct: 153 SRKKSKILNNNNNNEPSSKKVKLESTIQLAEGATFQEKLKNLQSNAKQDASYDDIVTNTS 212
Query: 158 STSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIK 217
+ W H +FL PD I D + R P HPDY+ TL+VP +FL +P + QWW +K
Sbjct: 213 NLDEPVVWPHQKLEFLQPDKIKDKEGRRPDHPDYDKSTLHVPEKFLNGLSPGVRQWWVLK 272
Query: 218 SQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
S N+DCVLFFKVGKFYEL+HMDA +G +EL +YM+
Sbjct: 273 SDNYDCVLFFKVGKFYELYHMDADVGVNELGFTYMR 308
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 75/131 (57%), Gaps = 6/131 (4%)
Query: 265 TQLCNYESQTP--SGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIK 322
T L +Q P G FPD+S+ L+YF AFDH A+ G I P+AG+D EYD MD I
Sbjct: 721 TTLLKRITQLPESGGSFPDLSKELQYFATAFDHDAAAKTGVIAPQAGMDAEYDAAMDSIG 780
Query: 323 SIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKA-KSNHQRVATK-KKN 380
+EK ++TYL Q HFGC + Y + K K+Y L+VP +ASKA KS TK KK
Sbjct: 781 EVEKRLKTYLVEQERHFGCRITYFGSDK--KRYQLDVPESHASKANKSYTLEGQTKGKKP 838
Query: 381 VENYVTPECRG 391
Y T E R
Sbjct: 839 SRRYTTAETRA 849
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI---EDKR 446
RGT T DG IA + + C T+F+THYH++ + + +M+ + ED
Sbjct: 1041 RGTATYDGTAIAASVVNFLANLKCRTLFSTHYHNLIDFFHNDKRITLGHMACMVENEDNA 1100
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
+ +T+ FLYK G CPKS+GFN A+LAG+P+ ++K ++ ++EA
Sbjct: 1101 DPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPQGIIKRAYELSKKVEA 1149
>gi|297667666|ref|XP_002812093.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 2 [Pongo
abelii]
Length = 1232
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 117/225 (52%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 105 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGDSESE 160
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPS---TPSFPVSDTSET 155
+ P + + + NG+ + SS+ P+ + T+ S+ + +F SE+
Sbjct: 161 GLNSPVKVARKRKRMVTGNGSLKRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSES 220
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 221 QAHVSGGGDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTP 280
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 281 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVTELGLVFMK 325
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1089 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1148
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + + L + +
Sbjct: 1149 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMN--QSLRVFR 1206
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L +K
Sbjct: 1207 EVCLASERSTVDAEAVHKLLTLIKEL 1232
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E +S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D
Sbjct: 747 MEEVADGFKSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFD 806
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +I+ E+ + YL Q GC T++Y + +Y LE+P + ++
Sbjct: 807 SDYDQALADIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPE 864
Query: 371 HQRVATKKKNVENYVT 386
+ + KK + Y T
Sbjct: 865 EYELKSTKKGCKRYWT 880
>gi|1817725|gb|AAC53034.1| G/T-mismatch binding protein [Mus musculus]
Length = 1358
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 84/230 (36%), Positives = 116/230 (50%), Gaps = 18/230 (7%)
Query: 36 EDDSPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSG--- 92
E+ P + PRR S + K + SDSE D GS+ E+ P + S + SSG
Sbjct: 229 EEAQPSVQGPRRSSRQVKKRRVISDSESDI----GGSDVEFKPDTKQEGSSDDASSGVGD 284
Query: 93 -EEELEESVEDPTPSSSEAEVTPMKNGNKR-GLSSKSGQPTKKPKLTAPSTPSTPSFPVS 150
+ E + P A V + G +R L ++G + + + + + +F
Sbjct: 285 SDSEDLGTFGKGAPKRKRAMVA--QGGLRRKSLKKETGSAKRATPILSETKSTLSAFSAP 342
Query: 151 DTSETTPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFL 203
SE+ SG + W H ++L D RR P HP++NP TLYVP EFL
Sbjct: 343 QNSESQTHVSGGGNDSSGPTVWYHETLEWLKQKKRRDEHRRRPDHPEFNPTTLYVPEEFL 402
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
TP M +WW +KSQNFD V+F+KVGKFYEL+HMDAVIG EL +MK
Sbjct: 403 NSCTPGMRKWWQLKSQNFDLVIFYKVGKFYELYHMDAVIGVSELGLIFMK 452
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1215 RGTATFDGTAIASAVVKELAETIKCRTLFSTHYHSLVEDYSKSVCVRLGHMACMVENECE 1274
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF
Sbjct: 1275 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFERMNQSLRLF 1331
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 72/127 (56%), Gaps = 3/127 (2%)
Query: 261 STLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDE 320
S L Q+ +S++P G FPD++ L+ ++ AFDH++A G I PKAG D +YD+ + +
Sbjct: 881 SKTLKQVVTLQSKSPKGRFPDLTAELQRWDTAFDHEKARKTGLITPKAGFDSDYDQALAD 940
Query: 321 IKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKK 379
I+ E+ + YL Q + GC +++Y + +Y LE+P +A++ + + KK
Sbjct: 941 IRENEQSLLEYLDKQRSRLGCKSIVYWGIGR--NRYQLEIPENFATRNLPEEYELKSTKK 998
Query: 380 NVENYVT 386
+ Y T
Sbjct: 999 GCKRYWT 1005
>gi|2696086|dbj|BAA23674.1| GTBP-N [Homo sapiens]
Length = 1360
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 117/225 (52%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 233 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGDSESE 288
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPS---TPSFPVSDTSET 155
+ P + + + NG+ + SS+ P+ + T+ S+ + +F SE+
Sbjct: 289 GLNSPVKVARKRKRMVTGNGSLKRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSES 348
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 349 QAHVSGGGDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTP 408
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 409 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMK 453
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1217 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1276
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1277 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 1334
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L +K
Sbjct: 1335 EVCLASERSTVDAEAVHKLLTLIKEL 1360
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E +S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D
Sbjct: 875 MEEVADGFKSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFD 934
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +I+ E+ + YL Q GC T++Y + +Y LE+P + ++
Sbjct: 935 SDYDQALADIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPE 992
Query: 371 HQRVATKKKNVENYVT 386
+ + KK + Y T
Sbjct: 993 EYELKSTKKGCKRYWT 1008
>gi|2662381|dbj|BAA23675.1| GTBP-ALT [Homo sapiens]
gi|2696085|dbj|BAA23673.1| GTBP-ALT [Homo sapiens]
Length = 1068
Score = 137 bits (344), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 117/225 (52%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 233 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGDSESE 288
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPS---TPSFPVSDTSET 155
+ P + + + NG+ + SS+ P+ + T+ S+ + +F SE+
Sbjct: 289 GLNSPVKVARKRKRMVTGNGSLKRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSES 348
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 349 QAHVSGGGDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTP 408
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 409 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMK 453
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E +S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D
Sbjct: 875 MEEVADGFKSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFD 934
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +I+ E+ + YL Q GC T++Y + +Y LE+P + ++
Sbjct: 935 SDYDQALADIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPE 992
Query: 371 HQRVATKKKNVENYVT 386
+ + KK + Y T
Sbjct: 993 EYELKSTKKGCKRYWT 1008
>gi|1840467|gb|AAB47425.1| bacterial MutS homolog [Homo sapiens]
Length = 1360
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 117/225 (52%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 233 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGDSESE 288
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPS---TPSFPVSDTSET 155
+ P + + + NG+ + SS+ P+ + T+ S+ + +F SE+
Sbjct: 289 GLNSPVKVARKRKRMVTGNGSLKRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSES 348
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 349 QAHVSGGGDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTP 408
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 409 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMK 453
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1217 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1276
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1277 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 1334
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L +K
Sbjct: 1335 EVCLASERSTVDAEAVHKLLTLIKEL 1360
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E +S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D
Sbjct: 875 MEEVADGFKSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFD 934
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +I+ E+ + YL Q GC T++Y + +Y LE+P + ++
Sbjct: 935 SDYDQALADIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPE 992
Query: 371 HQRVATKKKNVENYVT 386
+ + KK + Y T
Sbjct: 993 EYELKSTKKGCKRYWT 1008
>gi|4504191|ref|NP_000170.1| DNA mismatch repair protein Msh6 [Homo sapiens]
gi|68067672|sp|P52701.2|MSH6_HUMAN RecName: Full=DNA mismatch repair protein Msh6; Short=hMSH6;
AltName: Full=G/T mismatch-binding protein; Short=GTBP;
Short=GTMBP; AltName: Full=MutS-alpha 160 kDa subunit;
Short=p160
gi|1294813|gb|AAC50461.1| G/T mismatch binding protein [Homo sapiens]
gi|6063479|gb|AAB39212.2| hMSH6 protein [Homo sapiens]
gi|13279008|gb|AAH04246.1| MutS homolog 6 (E. coli) [Homo sapiens]
gi|119620614|gb|EAX00209.1| mutS homolog 6 (E. coli), isoform CRA_b [Homo sapiens]
gi|123987976|gb|ABM83824.1| mutS homolog 6 (E. coli) [synthetic construct]
gi|307684536|dbj|BAJ20308.1| mutS homolog 6 [synthetic construct]
Length = 1360
Score = 136 bits (343), Expect = 2e-29, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 117/225 (52%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 233 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGDSESE 288
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPS---TPSFPVSDTSET 155
+ P + + + NG+ + SS+ P+ + T+ S+ + +F SE+
Sbjct: 289 GLNSPVKVARKRKRMVTGNGSLKRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSES 348
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 349 QAHVSGGGDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTP 408
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 409 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMK 453
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1217 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1276
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1277 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 1334
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L +K
Sbjct: 1335 EVCLASERSTVDAEAVHKLLTLIKEL 1360
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E +S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D
Sbjct: 875 MEEVADGFKSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFD 934
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +I+ E+ + YL Q GC T++Y + +Y LE+P + ++
Sbjct: 935 SDYDQALADIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPE 992
Query: 371 HQRVATKKKNVENYVT 386
+ + KK + Y T
Sbjct: 993 EYELKSTKKGCKRYWT 1008
>gi|19548099|gb|AAL87401.1| mutS homolog 6 (E. coli) [Homo sapiens]
Length = 1358
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 117/225 (52%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 233 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGDSESE 288
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPS---TPSFPVSDTSET 155
+ P + + + NG+ + SS+ P+ + T+ S+ + +F SE+
Sbjct: 289 GLNSPVKVARKRKRMVTGNGSLKRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSES 348
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 349 QAHVSGGGDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTP 408
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 409 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMK 453
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 52/143 (36%), Positives = 78/143 (54%), Gaps = 5/143 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1217 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1276
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1277 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 1334
Query: 507 FASLVKSGEKVDVEELQKALESV 529
L VD E + K L +
Sbjct: 1335 EVCLASERSTVDAEAVHKLLTLI 1357
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E +S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D
Sbjct: 875 MEEVADGFKSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFD 934
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +I+ E+ + YL Q GC T++Y + +Y LE+P + ++
Sbjct: 935 SDYDQALADIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPE 992
Query: 371 HQRVATKKKNVENYVT 386
+ + KK + Y T
Sbjct: 993 EYELKSTKKGCKRYWT 1008
>gi|119620613|gb|EAX00208.1| mutS homolog 6 (E. coli), isoform CRA_a [Homo sapiens]
Length = 1068
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 117/225 (52%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 233 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGDSESE 288
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPS---TPSFPVSDTSET 155
+ P + + + NG+ + SS+ P+ + T+ S+ + +F SE+
Sbjct: 289 GLNSPVKVARKRKRMVTGNGSLKRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSES 348
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 349 QAHVSGGGDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTP 408
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 409 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMK 453
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E +S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D
Sbjct: 875 MEEVADGFKSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFD 934
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +I+ E+ + YL Q GC T++Y + +Y LE+P + ++
Sbjct: 935 SDYDQALADIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPE 992
Query: 371 HQRVATKKKNVENYVT 386
+ + KK + Y T
Sbjct: 993 EYELKSTKKGCKRYWT 1008
>gi|328779790|ref|XP_392346.4| PREDICTED: probable DNA mismatch repair protein Msh6 [Apis
mellifera]
Length = 1129
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 55/89 (61%), Positives = 70/89 (78%)
Query: 165 WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCV 224
W H Y FL P+ I D +++SP DY+PKTLYVP +FL +QTP M QWW +KS++FDCV
Sbjct: 180 WPHLKYDFLQPNKIRDINKKSPNDSDYDPKTLYVPLDFLNQQTPAMRQWWELKSKHFDCV 239
Query: 225 LFFKVGKFYELFHMDAVIGADELACSYMK 253
LFFK+GKFYEL+HMDAVIG +EL +YM+
Sbjct: 240 LFFKLGKFYELYHMDAVIGVNELHLTYMR 268
Score = 92.0 bits (227), Expect = 8e-16, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 81/146 (55%), Gaps = 9/146 (6%)
Query: 245 DELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNI 304
D L + E C STL+++ C E P G FP + E L YF+ AFDH+EA G I
Sbjct: 666 DVLKIIALFEDFC---STLISKCCKVE---PDGEFPSLRESLDYFKTAFDHEEAKKVGCI 719
Query: 305 IPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYA 364
+PK GVD EYD V+ E++ I+K+ + YL Q HFG + + + K K+Y +E+P
Sbjct: 720 VPKKGVDSEYDSVLMELEEIKKDSEQYLEKQKKHFGVKITFHGSDK--KRYQIEIPDSQT 777
Query: 365 SKAKSNHQRVATKKKNVENYVTPECR 390
K + + + +++K + Y T E +
Sbjct: 778 KKVGAGFE-LQSQRKGYKRYYTAESK 802
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 65/118 (55%), Gaps = 3/118 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRND 448
RGT T DG IA + ++ C T+F+THYHS+ + + +M+ +E++ D
Sbjct: 995 RGTSTYDGTAIAAAVVNALTKLNCRTLFSTHYHSLVEDYKNNKKITLAHMACMVENEEQD 1054
Query: 449 GI--DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFI 504
+ +T+ FLYKL G CPKS+GFN A L G+P + ++ ++E N + FI
Sbjct: 1055 KVSQETVTFLYKLSEGACPKSYGFNAARLGGVPAVITSRAHEISKKLEQETNRKHFFI 1112
>gi|328718270|ref|XP_001946118.2| PREDICTED: DNA mismatch repair protein Msh6-like [Acyrthosiphon
pisum]
Length = 1185
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 95/253 (37%), Positives = 125/253 (49%), Gaps = 33/253 (13%)
Query: 18 STPASSKGKKTSKSPAKSEDDSPVTKRPR----------------RKSAKRVKSAIQSDS 61
S S GKKT S S + ++PR RK +R+ S
Sbjct: 59 SAVNGSSGKKTISSNGGSTKKNTEKRKPRPLDESIEENEENEELPRKKRRRLALEDLSGD 118
Query: 62 EPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKR 121
E D S DEYVP ++ S E +S D S+ EV+P+K K
Sbjct: 119 EED-------SGDEYVPDMKALKESESEESPEPSDNDSFID---DESDEEVSPVKI--KS 166
Query: 122 GLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQD-WSHNHYQFLHPDHILD 180
G ++KS +K K TP+ T ETT D W H +FL P+ I D
Sbjct: 167 GKNTKSVGKSKFNKFNKSYTPAVDK----STKETTKINGVDHDNWPHLKLEFLKPEKIKD 222
Query: 181 ADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDA 240
A+++SP P+YNP+TLYVP +F TP + QWW +K+Q+FDC+LFFKVGKFYE++HMDA
Sbjct: 223 ANKKSPSDPNYNPRTLYVPEDFKLTLTPGVRQWWELKAQHFDCILFFKVGKFYEMYHMDA 282
Query: 241 VIGADELACSYMK 253
V A EL YMK
Sbjct: 283 VTTAKELNLLYMK 295
Score = 112 bits (279), Expect = 7e-22, Method: Compositional matrix adjust.
Identities = 55/127 (43%), Positives = 81/127 (63%), Gaps = 3/127 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
ES LL +CNY + + G FP ++ELL FEN+FDH EA G I P+ G+D +YD V++
Sbjct: 718 ESNLLAAICNYPNGSVPGVFPHLTELLDNFENSFDHDEAMKHGRIFPEPGMDDQYDTVLE 777
Query: 320 EIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKK 379
+IK ++ E+++YL+ QC HFGCTV Y + K K+Y LEVP ASK + + ++K
Sbjct: 778 KIKEVDIELKSYLKEQCKHFGCTVNYFGSDK--KRYQLEVPDA-ASKRAGDGYELQNQRK 834
Query: 380 NVENYVT 386
+ + T
Sbjct: 835 GYKRFTT 841
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 56/140 (40%), Positives = 76/140 (54%), Gaps = 7/140 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRND 448
RGT T DG IA + + +Q C T+F+THYHS+ + P VA +M+ +E+ +
Sbjct: 1046 RGTSTYDGTAIASAVVTELVQKQCRTLFSTHYHSLVEDFKMNPLVALGHMACMVENDETN 1105
Query: 449 GIDT------IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
IDT I FLYK G CPKS+GFN A LAG+P D++K G + + E R L
Sbjct: 1106 EIDTEQTQETITFLYKFANGACPKSYGFNAARLAGMPADIIKVGLRRSKEFETAAKRRIL 1165
Query: 503 FIHKFASLVKSGEKVDVEEL 522
F F+S KS K + L
Sbjct: 1166 FKTLFSSNDKSVVKTAILAL 1185
>gi|297667664|ref|XP_002812092.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 1 [Pongo
abelii]
Length = 1362
Score = 136 bits (343), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 117/225 (52%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 235 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGDSESE 290
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPS---TPSFPVSDTSET 155
+ P + + + NG+ + SS+ P+ + T+ S+ + +F SE+
Sbjct: 291 GLNSPVKVARKRKRMVTGNGSLKRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSES 350
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 351 QAHVSGGGDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTP 410
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 411 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVTELGLVFMK 455
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1219 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1278
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + + L + +
Sbjct: 1279 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMN--QSLRVFR 1336
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L +K
Sbjct: 1337 EVCLASERSTVDAEAVHKLLTLIKEL 1362
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E +S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D
Sbjct: 877 MEEVADGFKSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFD 936
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +I+ E+ + YL Q GC T++Y + +Y LE+P + ++
Sbjct: 937 SDYDQALADIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPE 994
Query: 371 HQRVATKKKNVENYVT 386
+ + KK + Y T
Sbjct: 995 EYELKSTKKGCKRYWT 1010
>gi|403260724|ref|XP_003922808.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 2 [Saimiri
boliviensis boliviensis]
Length = 1228
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 117/225 (52%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 102 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGDSESE 157
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQP--TKKPKLTAPSTPSTPS-FPVSDTSET 155
+ P + + + NG+ + SS+ P TK+ + T +T S F SE+
Sbjct: 158 GLNSPVKVARKRKRMVTGNGSLKRKSSRKEAPSATKRAIGISSETKNTLSAFSAPQNSES 217
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 218 QAHVSGGGDDSSRPPVWYHETLEWLKEEKRRDEHRRRPDHPDFDGSTLYVPEDFLNSCTP 277
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 278 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMK 322
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1085 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1144
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1145 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 1202
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L +K
Sbjct: 1203 EVCLASERSTVDAEAVHKLLTLIKEL 1228
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 752 KSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 811
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q GC T++Y + +Y LE+P + ++ + + K
Sbjct: 812 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPEEYELKSTK 869
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 870 KGCKRYWT 877
>gi|91082687|ref|XP_971522.1| PREDICTED: similar to DNA mismatch repair protein muts [Tribolium
castaneum]
Length = 1079
Score = 136 bits (342), Expect = 3e-29, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 67/90 (74%)
Query: 164 DWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDC 223
+W HN FL PD I D ++R P PDY+P+TLY+P FL+KQTP M QWW +KS + D
Sbjct: 131 NWLHNRLDFLQPDKIRDVNKRRPDDPDYDPRTLYIPQSFLEKQTPAMRQWWVLKSTHMDS 190
Query: 224 VLFFKVGKFYELFHMDAVIGADELACSYMK 253
VLFFKVGKFYEL+HMDAV+G +L SYMK
Sbjct: 191 VLFFKVGKFYELYHMDAVVGVTQLGFSYMK 220
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 72/125 (57%), Gaps = 1/125 (0%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T+DG IA +EK I C T+F+THYHS+ +V +M+ + + +D
Sbjct: 944 RGTSTHDGNAIATAYVEKLTTINCRTLFSTHYHSLVDHFEARRDVQLGHMACMVENDDDP 1003
Query: 450 ID-TIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
+ ++ FLYK+ G CPKS+GFNVA L+G+ +V G ++ Q+E RQ+F F
Sbjct: 1004 TEESVTFLYKMARGRCPKSYGFNVARLSGLKHCIVSRGREISKQLENESKSRQVFRDLFT 1063
Query: 509 SLVKS 513
S V +
Sbjct: 1064 SSVAT 1068
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 7/123 (5%)
Query: 256 GCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYD 315
GC +S+LL +L ++ P G + D++ELL +F++AFD +EA G IIPK GVD+ YD
Sbjct: 620 GC--QSSLLKRLTQFK---PDGHYVDLTELLLFFKHAFDQEEAQKEGKIIPKPGVDENYD 674
Query: 316 EVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVA 375
+ D IK++ K++ YL FGC V Y + K K++ +++P + K S +Q
Sbjct: 675 QAQDAIKAVTKKLDEYLVELQQFFGCKVTYFGSDK--KRFQIDIPESHTKKVTSEYQLEG 732
Query: 376 TKK 378
TKK
Sbjct: 733 TKK 735
>gi|270014976|gb|EFA11424.1| hypothetical protein TcasGA2_TC013601 [Tribolium castaneum]
Length = 1085
Score = 136 bits (342), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 55/90 (61%), Positives = 67/90 (74%)
Query: 164 DWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDC 223
+W HN FL PD I D ++R P PDY+P+TLY+P FL+KQTP M QWW +KS + D
Sbjct: 131 NWLHNRLDFLQPDKIRDVNKRRPDDPDYDPRTLYIPQSFLEKQTPAMRQWWVLKSTHMDS 190
Query: 224 VLFFKVGKFYELFHMDAVIGADELACSYMK 253
VLFFKVGKFYEL+HMDAV+G +L SYMK
Sbjct: 191 VLFFKVGKFYELYHMDAVVGVTQLGFSYMK 220
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 48/125 (38%), Positives = 72/125 (57%), Gaps = 1/125 (0%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T+DG IA +EK I C T+F+THYHS+ +V +M+ + + +D
Sbjct: 950 RGTSTHDGNAIATAYVEKLTTINCRTLFSTHYHSLVDHFEARRDVQLGHMACMVENDDDP 1009
Query: 450 ID-TIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
+ ++ FLYK+ G CPKS+GFNVA L+G+ +V G ++ Q+E RQ+F F
Sbjct: 1010 TEESVTFLYKMARGRCPKSYGFNVARLSGLKHCIVSRGREISKQLENESKSRQVFRDLFT 1069
Query: 509 SLVKS 513
S V +
Sbjct: 1070 SSVAT 1074
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 48/123 (39%), Positives = 74/123 (60%), Gaps = 7/123 (5%)
Query: 256 GCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYD 315
GC +S+LL +L ++ P G + D++ELL +F++AFD +EA G IIPK GVD+ YD
Sbjct: 626 GC--QSSLLKRLTQFK---PDGHYVDLTELLLFFKHAFDQEEAQKEGKIIPKPGVDENYD 680
Query: 316 EVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVA 375
+ D IK++ K++ YL FGC V Y + K K++ +++P + K S +Q
Sbjct: 681 QAQDAIKAVTKKLDEYLVELQQFFGCKVTYFGSDK--KRFQIDIPESHTKKVTSEYQLEG 738
Query: 376 TKK 378
TKK
Sbjct: 739 TKK 741
>gi|403260722|ref|XP_003922807.1| PREDICTED: DNA mismatch repair protein Msh6 isoform 1 [Saimiri
boliviensis boliviensis]
Length = 1358
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 117/225 (52%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 232 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGDSESE 287
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQP--TKKPKLTAPSTPSTPS-FPVSDTSET 155
+ P + + + NG+ + SS+ P TK+ + T +T S F SE+
Sbjct: 288 GLNSPVKVARKRKRMVTGNGSLKRKSSRKEAPSATKRAIGISSETKNTLSAFSAPQNSES 347
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 348 QAHVSGGGDDSSRPPVWYHETLEWLKEEKRRDEHRRRPDHPDFDGSTLYVPEDFLNSCTP 407
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 408 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMK 452
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1215 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1274
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1275 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 1332
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L +K
Sbjct: 1333 EVCLASERSTVDAEAVHKLLTLIKEL 1358
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 882 KSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 941
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q GC T++Y + +Y LE+P + ++ + + K
Sbjct: 942 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPEEYELKSTK 999
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 1000 KGCKRYWT 1007
>gi|355751303|gb|EHH55558.1| hypothetical protein EGM_04790 [Macaca fascicularis]
Length = 1235
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 114/225 (50%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 134 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGDSESE 189
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPS---TPSFPVSDTSET 155
P + + + NG+ + SS+ P+ + T S+ + +F E+
Sbjct: 190 GPNSPVKVARKRKRVVTGNGSLKRKSSRKEMPSATKRATGISSETKNTLSAFSAPQNPES 249
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD+N TLYVP +FL TP
Sbjct: 250 QAHVSGGGDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFNASTLYVPEDFLNSCTP 309
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 310 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMK 354
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1118 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1177
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF
Sbjct: 1178 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF 1234
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 784 KSKILKQVISLQTKNPEGRFPDLTTELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 843
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q GC T++Y + +Y LE+P + ++ + + K
Sbjct: 844 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPEEYELKSTK 901
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 902 KGCKRYWT 909
>gi|355565681|gb|EHH22110.1| hypothetical protein EGK_05312 [Macaca mulatta]
Length = 1235
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 114/225 (50%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 134 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGDSESE 189
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPS---TPSFPVSDTSET 155
P + + + NG+ + SS+ P+ + T S+ + +F E+
Sbjct: 190 GPNSPVKVARKRKRVVTGNGSLKRKSSRKEMPSATKRATGISSETKNTLSAFSAPQNPES 249
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD+N TLYVP +FL TP
Sbjct: 250 QAHVSGGGDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFNASTLYVPEDFLNSCTP 309
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 310 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMK 354
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1118 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1177
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF
Sbjct: 1178 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF 1234
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 784 KSKILKQVISLQTKNPEGRFPDLTTELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 843
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q GC T++Y + +Y LE+P + ++ + + K
Sbjct: 844 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPEEYELKSTK 901
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 902 KGCKRYWT 909
>gi|332024253|gb|EGI64457.1| Putative DNA mismatch repair protein Msh6 [Acromyrmex echinatior]
Length = 1122
Score = 135 bits (341), Expect = 4e-29, Method: Compositional matrix adjust.
Identities = 60/109 (55%), Positives = 74/109 (67%), Gaps = 1/109 (0%)
Query: 145 PSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLK 204
PS PV + + + A W H FL P+ I D RR P PDY+ KTLYVP EFL
Sbjct: 152 PSQPVQ-SQIISNGLNTAHTWPHLKLDFLRPEKIRDIHRRMPNDPDYDSKTLYVPTEFLI 210
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
QTP M QWW +KS++FDCV FFK+GKFYEL+HMDAVIG +EL+ +YM+
Sbjct: 211 NQTPAMRQWWELKSKHFDCVFFFKIGKFYELYHMDAVIGVNELSLTYMR 259
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 75/131 (57%), Gaps = 6/131 (4%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S L+T+ YE P+G FP + E L YF+ AFDH+EA G I+PK GVD EYD V+
Sbjct: 671 KSNLITRYTQYE---PNGDFPRLRETLDYFKTAFDHEEAKKQGYIVPKKGVDAEYDSVLT 727
Query: 320 EIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKK 379
E+ I+K++ YL Q HFG + + + K+Y +E+P K ++ + +++K
Sbjct: 728 ELADIKKDLDKYLEKQKQHFGVKITFHGTDR--KRYQIEIPESQVKKVGPGYE-LQSQRK 784
Query: 380 NVENYVTPECR 390
+ Y T E +
Sbjct: 785 GFKRYYTAEAK 795
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 42/117 (35%), Positives = 63/117 (53%), Gaps = 3/117 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG IA ++ ++ C T+F+THYHS+ + V +M+ + + +
Sbjct: 988 RGTSTYDGTAIAAAVVDALTKLKCRTLFSTHYHSLVEDYKTNEEVTLAHMACMVETEEEE 1047
Query: 450 IDTI---VFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
+ FLYKL G CPKS+GFN A LAG+P + K +A +ME N + +F
Sbjct: 1048 EVSQETVTFLYKLSEGACPKSYGFNAARLAGVPSVITKRAHEIASRMEQETNHKHIF 1104
>gi|322778889|gb|EFZ09305.1| hypothetical protein SINV_13902 [Solenopsis invicta]
Length = 838
Score = 135 bits (340), Expect = 5e-29, Method: Compositional matrix adjust.
Identities = 55/91 (60%), Positives = 69/91 (75%)
Query: 163 QDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFD 222
Q W H FL P+ I D +RR+ PDY+PKTLYVP +FL QTP M QWW +KS++FD
Sbjct: 144 QTWPHLKLDFLKPEKIKDINRRTLNDPDYDPKTLYVPTDFLNNQTPAMRQWWELKSRHFD 203
Query: 223 CVLFFKVGKFYELFHMDAVIGADELACSYMK 253
CV FFK+GKFYEL+HMDAVIG +EL+ +YM+
Sbjct: 204 CVFFFKIGKFYELYHMDAVIGVNELSLTYMR 234
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 64/123 (52%), Gaps = 3/123 (2%)
Query: 384 YVTPECRGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIE 443
Y RGT T DG IA ++ ++ C T+F+THYHS+ + V +M+ +
Sbjct: 698 YFLIAGRGTSTYDGTAIAASVVDALTKLNCRTLFSTHYHSLVEDYKTNEEVTLAHMACMV 757
Query: 444 DKRNDGIDTI---VFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR 500
+ + + FLYKL G CPKS+GFN A LAG+P + K +A +ME N +
Sbjct: 758 ETEEEEEVSQETVTFLYKLSEGACPKSYGFNAARLAGVPSIITKRAHEIASKMEQETNHK 817
Query: 501 QLF 503
+F
Sbjct: 818 HIF 820
>gi|388453415|ref|NP_001253005.1| DNA mismatch repair protein Msh6 [Macaca mulatta]
gi|380812114|gb|AFE77932.1| DNA mismatch repair protein Msh6 [Macaca mulatta]
gi|383417799|gb|AFH32113.1| DNA mismatch repair protein Msh6 [Macaca mulatta]
gi|384946650|gb|AFI36930.1| DNA mismatch repair protein Msh6 [Macaca mulatta]
Length = 1360
Score = 135 bits (340), Expect = 6e-29, Method: Compositional matrix adjust.
Identities = 85/225 (37%), Positives = 114/225 (50%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 233 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGDSESE 288
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPS---TPSFPVSDTSET 155
P + + + NG+ + SS+ P+ + T S+ + +F E+
Sbjct: 289 GPNSPVKVARKRKRVVTGNGSLKRKSSRKEMPSATKRATGISSETKNTLSAFSAPQNPES 348
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD+N TLYVP +FL TP
Sbjct: 349 QAHVSGGGDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFNASTLYVPEDFLNSCTP 408
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 409 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMK 453
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1217 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1276
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1277 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 1334
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L +K
Sbjct: 1335 EVCLASERSTVDAEAVHKLLTLIKEL 1360
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 883 KSKILKQVISLQTKNPEGRFPDLTTELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 942
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q GC T++Y + +Y LE+P + ++ + + K
Sbjct: 943 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPEEYELKSTK 1000
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 1001 KGCKRYWT 1008
>gi|195495129|ref|XP_002095136.1| GE19856 [Drosophila yakuba]
gi|194181237|gb|EDW94848.1| GE19856 [Drosophila yakuba]
Length = 1190
Score = 135 bits (339), Expect = 7e-29, Method: Compositional matrix adjust.
Identities = 91/271 (33%), Positives = 137/271 (50%), Gaps = 22/271 (8%)
Query: 4 DSKESPEKKGDSESSTPASSKGKKTSKSPAKSEDDSPVTKRPRRKSAKRVKSAIQSDSEP 63
D KES +K + ++ KK PA ++ P++ ++ K +Q +SE
Sbjct: 39 DPKESTTEKENLQNQQLKVKDAKKEDSKPA-AKRKLPISDDETGNGQRKRKRIVQPESES 97
Query: 64 DDMLQDNGSEDEYVPPKAEVE------SESEHSSGEEEL-----EESVEDPTPSSSEAEV 112
+ +++ SED++ ++ E S+ SSGEEE+ + SV+ PTP S +
Sbjct: 98 EPEMEETKSEDDFSDCASDYEPDDNEASDDSGSSGEEEVSPSENDMSVDSPTPKKSRKKS 157
Query: 113 TPMKNGNKRGLSSKSGQ----------PTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGA 162
+ N N +SK + T + KL + + D TT +
Sbjct: 158 KILNNNNNNEPTSKKVKLESPIQLAEGSTFQEKLKNLQSNAKKDASYDDIVTTTSNLDEP 217
Query: 163 QDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFD 222
W H +FL PD I+D +R P HPDY+ TL+VP FL +P + QWW +KS N+D
Sbjct: 218 VVWPHQKLEFLQPDKIMDKQKRRPDHPDYDKSTLHVPENFLNGLSPGVRQWWVLKSSNYD 277
Query: 223 CVLFFKVGKFYELFHMDAVIGADELACSYMK 253
CVLFFKVGKFYEL+HMDA +G +EL +YM+
Sbjct: 278 CVLFFKVGKFYELYHMDADVGVNELGFTYMR 308
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 75/131 (57%), Gaps = 6/131 (4%)
Query: 265 TQLCNYESQTPS--GCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIK 322
T L +Q P G FPD+S+ L+YF AFDH A+ G I P+AG+D EYD MD I
Sbjct: 721 TALLRRITQLPESEGTFPDLSKELQYFATAFDHDAAAKTGVIAPQAGMDAEYDAAMDSIG 780
Query: 323 SIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKA-KSNHQRVATK-KKN 380
IEK +++YL Q HFGC + Y + K K+Y L+VP +ASKA KS TK KK
Sbjct: 781 EIEKRLKSYLEEQERHFGCRITYFGSDK--KRYQLDVPESHASKANKSYSLEGQTKGKKP 838
Query: 381 VENYVTPECRG 391
Y T E R
Sbjct: 839 CRRYTTAETRA 849
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 64/109 (58%), Gaps = 3/109 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI---EDKR 446
RGT T DG IA + + C T+F+THYH++ ++ + +M+ + ED
Sbjct: 1041 RGTATYDGTAIAASVVNFLANLKCRTLFSTHYHNLIDFFHDDKRITLGHMACMVENEDNA 1100
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
+ +T+ FLYK G CPKS+GFN A+LAG+P+ ++K ++ ++EA
Sbjct: 1101 DPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPQGIIKRAYELSKKVEA 1149
>gi|427791863|gb|JAA61383.1| Putative mismatch repair atpase msh6 muts family, partial
[Rhipicephalus pulchellus]
Length = 446
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 76/188 (40%), Positives = 108/188 (57%), Gaps = 24/188 (12%)
Query: 66 MLQDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSS 125
++ D+ SEDE+ P + EVES+S+ +S + E+++ DP P S P K+ ++ +S
Sbjct: 180 LISDSSSEDEFQPGRNEVESDSDSASSGVD-EDTISDPAPES------PEKSPPRKRPAS 232
Query: 126 KSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRS 185
KS P PK+ P+T TSG W+H Y FL DA R
Sbjct: 233 KS--PAVTPKVKKPAT-------------VAAVTSGT--WAHLSYDFLKEGKRRDAAGRL 275
Query: 186 PKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGAD 245
HP+++P TL++P F K TP M QWW +K+++ D +LFFKVGKFYEL+HMDAVIG +
Sbjct: 276 ATHPEFSPHTLFIPDSFKAKLTPAMRQWWDMKAEHLDVILFFKVGKFYELYHMDAVIGVE 335
Query: 246 ELACSYMK 253
EL +MK
Sbjct: 336 ELGLVFMK 343
>gi|242011381|ref|XP_002426429.1| conserved hypothetical protein [Pediculus humanus corporis]
gi|212510534|gb|EEB13691.1| conserved hypothetical protein [Pediculus humanus corporis]
Length = 1265
Score = 134 bits (337), Expect = 1e-28, Method: Compositional matrix adjust.
Identities = 54/97 (55%), Positives = 71/97 (73%)
Query: 157 PSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTI 216
P DW H + FL P++I+D +R P HPDY+ KTLYVP +F K TP + QWW +
Sbjct: 284 PDEEKLDDWPHLKFSFLQPENIMDKKKRRPDHPDYDKKTLYVPEDFKAKATPAVRQWWEL 343
Query: 217 KSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
KS ++DC+LFFKVGKFYEL+HMDAVIG +EL+ ++MK
Sbjct: 344 KSDHYDCILFFKVGKFYELYHMDAVIGVNELSLTFMK 380
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 56/132 (42%), Positives = 78/132 (59%), Gaps = 7/132 (5%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIP-KAGVDKEYDEVM 318
+S LL Q + +P+G F D+SE L +F+NAFDH A G IIP +GVD EYD V+
Sbjct: 804 DSELLRQCLLF---SPNGKFKDLSEDLNFFKNAFDHDLAKKEGCIIPVSSGVDSEYDSVV 860
Query: 319 DEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
EIKSIE E YL++QC F +V Y +K ++ LEVP A KA N++ + +
Sbjct: 861 KEIKSIEIESNKYLKSQCQFFQTSVKYYGTEK--NRFQLEVPDSQAKKANENYEFTSC-R 917
Query: 379 KNVENYVTPECR 390
K + + TPE +
Sbjct: 918 KGYKRFTTPETK 929
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 49/143 (34%), Positives = 74/143 (51%), Gaps = 7/143 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI--EDKRN 447
RGT T DG IA +++ GC T+F+THYH + +E +V +M+ + D+ +
Sbjct: 1126 RGTSTYDGTAIAYSVVKELSHRGCRTLFSTHYHILIDDFKESDSVTLGHMACMVETDEED 1185
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKF 507
+T+ FLYK V G CPKS+GFN A+LAGIP +++K +E R + F
Sbjct: 1186 PSEETVTFLYKFVDGACPKSYGFNAAKLAGIPINIIKAARKKTALLEKESEKRDILKKLF 1245
Query: 508 ASLVKSGEKVDVEELQKALESVK 530
+ EK EE K ++
Sbjct: 1246 QT-----EKYSTEEFSKLFNLIR 1263
>gi|307206242|gb|EFN84313.1| Probable DNA mismatch repair protein Msh6 [Harpegnathos saltator]
Length = 1135
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 68/138 (49%), Positives = 85/138 (61%), Gaps = 10/138 (7%)
Query: 116 KNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHP 175
K G RG + K+PK T S VS+ S TP+ W H FL P
Sbjct: 137 KPGRPRGSKYSTKTSKKEPK----QAIQTQSQAVSNGSTATPT------WPHLKLDFLQP 186
Query: 176 DHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYEL 235
+ I D RR+P DY+ KT+YVP +FL QTP M QWW +KS++FDCVLFFKVGKFYEL
Sbjct: 187 EKIKDIKRRTPIDCDYDSKTVYVPHDFLLNQTPAMRQWWELKSKHFDCVLFFKVGKFYEL 246
Query: 236 FHMDAVIGADELACSYMK 253
+HMDAVIG +EL+ +YM+
Sbjct: 247 YHMDAVIGVNELSLTYMR 264
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 49/131 (37%), Positives = 72/131 (54%), Gaps = 6/131 (4%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S L+T+ YE P G FP + E L YF+ AFDH+EA G I+PK GVD EYD V+
Sbjct: 675 KSNLITRCTQYE---PDGEFPRLRETLDYFKTAFDHEEAKKQGCIVPKKGVDAEYDSVLT 731
Query: 320 EIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKK 379
E+ ++ YL+ Q HFG V + + K+Y +EVP K ++ + +++K
Sbjct: 732 ELAQNRADLDQYLQKQKQHFGVKVTFHGTDR--KRYQIEVPETQVKKVGPGYE-LQSQRK 788
Query: 380 NVENYVTPECR 390
+ Y T E R
Sbjct: 789 GFKRYYTAEAR 799
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 46/140 (32%), Positives = 73/140 (52%), Gaps = 7/140 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG IA ++ ++ C T+F+THYHS+ + V +M+ + + +
Sbjct: 992 RGTSTYDGTAIAASVVDALTKLKCRTLFSTHYHSLVEDYKTNKEVTLAHMACMVETEEEE 1051
Query: 450 IDTI---VFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
+ FLYKL G CPKS+GFN A LAG+P + K +A +ME N + H
Sbjct: 1052 EVSQETVTFLYKLSEGACPKSYGFNAARLAGVPSVITKRAHEIASRMEQETNQK----HI 1107
Query: 507 FASLVKSGEKVDVEELQKAL 526
F++L ++ ++ +L L
Sbjct: 1108 FSALCRANAAAEMRDLLIML 1127
>gi|73970143|ref|XP_531814.2| PREDICTED: DNA mismatch repair protein Msh6 [Canis lupus
familiaris]
Length = 1283
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 116/225 (51%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P + RR S + K + SDSE D GS+ E+ P E S E SSG + + E
Sbjct: 155 PKVQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDAKEEGSSDEISSGVGDSDSE 210
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPST---PSTPSFPVSDTSET 155
++ P +S+ + NG+ + SS+ P + T S+ + ++ SE+
Sbjct: 211 GLDSPVKVASKRKKMVTGNGSLKRKSSRKEMPPATKRSTGISSETKSALNAYSAPQNSES 270
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
G D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 271 QAHIGGGCDDSSRPTIWYHETLEWLKEEKRRDLHRRRPDHPDFDASTLYVPEDFLNSCTP 330
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD ++F+KVGKFYEL+HMDA+ G +EL +MK
Sbjct: 331 GMRKWWQIKSQNFDLIIFYKVGKFYELYHMDALTGVNELGLVFMK 375
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1140 RGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1199
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E +LF +
Sbjct: 1200 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMTQSLRLF--R 1257
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L +K
Sbjct: 1258 EVCLASERSTVDAEAVPKLLTLIKEL 1283
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ +++ P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 805 KSKILKQVITLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 864
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q + GC T++Y + +Y LE+P + ++ + + K
Sbjct: 865 DIRENEQSLLEYLEKQRSRIGCRTIVYWGIGR--NRYQLEIPENFITRNLPEEYELKSTK 922
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 923 KGCKRYWT 930
>gi|395508080|ref|XP_003758343.1| PREDICTED: DNA mismatch repair protein Msh6 [Sarcophilus harrisii]
Length = 1424
Score = 134 bits (336), Expect = 2e-28, Method: Compositional matrix adjust.
Identities = 85/234 (36%), Positives = 114/234 (48%), Gaps = 37/234 (15%)
Query: 44 RPRRKSAKRV-----KSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELEE 98
RP+R+ AKR K + SDSE D GS+ E+ P E S E SSG E +
Sbjct: 294 RPKRQMAKRSTARNKKMRVVSDSESDI----GGSDVEFKPDTKEEGSSDEASSGMGESDS 349
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPS 158
++ P ++ + KRG + S K + P S+T T +
Sbjct: 350 DMDSPVKAAPK---------RKRGTAVNSSLKRKSLGGCTSNVPKRVVGVSSETKNTLNA 400
Query: 159 TSGAQD-------------------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVP 199
S Q+ W H ++L DA RR P HPDY+P T++VP
Sbjct: 401 FSAPQNFEAQAQVSGGGDGSCGSTQWYHETLEWLKEGKRKDACRRRPDHPDYDPNTVHVP 460
Query: 200 PEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
+FL TP M +WW IKSQNFD V+F+KVGKFYEL+HMDA+IG +EL +MK
Sbjct: 461 EDFLNTCTPGMRRWWQIKSQNFDLVIFYKVGKFYELYHMDAIIGVNELGLVFMK 514
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 78/144 (54%), Gaps = 5/144 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1281 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVCLGHMACMVENECE 1340
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK G CPKS+GFN A LA +PE++++ G A + E +LF
Sbjct: 1341 DPSQETITFLYKFTKGACPKSYGFNAARLACLPEEIIQKGHRKAKEFEKMTQSLRLFREV 1400
Query: 507 FASLVKSGEKVDVEELQKALESVK 530
+L S DV+ + K L +K
Sbjct: 1401 CLALENSA--ADVQAIHKLLTLIK 1422
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 69/138 (50%), Gaps = 3/138 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E +S +L Q+ +Q G FP+++ L ++ AFDH++A G I PK G D
Sbjct: 936 MEEVVGNFKSKILKQVITLRTQNSGGRFPELTTELNRWDTAFDHEKARKTGIITPKTGFD 995
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +IK E+ + YL Q GC +++Y K +Y LE+P +
Sbjct: 996 SDYDQALVDIKDNEQSLLDYLEKQRKRIGCRSIVYWGVGK--NRYQLEIPESFTLHDLPG 1053
Query: 371 HQRVATKKKNVENYVTPE 388
+ + KK + Y T +
Sbjct: 1054 EYELKSTKKGCKRYWTKD 1071
>gi|351695606|gb|EHA98524.1| DNA mismatch repair protein Msh6 [Heterocephalus glaber]
Length = 1363
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 87/234 (37%), Positives = 116/234 (49%), Gaps = 33/234 (14%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P + RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 237 PKMQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDAKEEGSSDEISSGVGDSESE 292
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPS 158
++ P +V P + KR K G + PST + +S+T T +
Sbjct: 293 GLDSPV------KVAPKR---KRMGIGKIGFKKNSSRTETPSTTKRAAGILSETKNTLSA 343
Query: 159 TSGAQD-------------------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVP 199
SG Q+ W H ++L + D RR P HPD++ TLYVP
Sbjct: 344 FSGPQNSEAQAQGSRGGDDGSGSSVWYHETLEWLKKEKRRDEHRRRPDHPDFDASTLYVP 403
Query: 200 PEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
+FL TP M +WW IKSQNFD V+F+KVGKFYEL+HMDA+IG +EL +MK
Sbjct: 404 EDFLNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVNELGLVFMK 457
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1220 RGTATFDGTAIANAVVKELAETIRCRTLFSTHYHSLVEDYSKNVAVRLGHMACMVENECE 1279
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D + I FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1280 DPSQENITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKVNQSLRLF--R 1337
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L +D E L K L +K
Sbjct: 1338 EVCLASERSSIDAEALHKLLALIKEL 1363
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ +++ P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 886 KSKILKQVITLQTKNPEGRFPDLTIELNRWDTAFDHEKARRTGLITPKAGFDSDYDQALA 945
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q + GC T++Y + +Y LE+P + + + + K
Sbjct: 946 DIRENEQSLLEYLDKQRSRIGCRTIVYWGIGR--NRYQLEIPENFTTHNLPEEYELKSTK 1003
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 1004 KGCKRYWT 1011
>gi|195162754|ref|XP_002022219.1| GL25757 [Drosophila persimilis]
gi|194104180|gb|EDW26223.1| GL25757 [Drosophila persimilis]
Length = 945
Score = 133 bits (334), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 91/250 (36%), Positives = 124/250 (49%), Gaps = 17/250 (6%)
Query: 16 ESSTPASSKGKKTSKSPAKSEDDSPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDE 75
E+ T S+K K +P+ E+ KR R + +++ +D +G E +
Sbjct: 64 ETETKPSAKRKLPISTPSDEEELGGRRKRKRIVLPESESEDEMEETKSEDDF--SGDESD 121
Query: 76 YVPP----KAEVESESEHSSGEEEL--EESVEDPTPSSSEAEVTPMKN------GNKRGL 123
Y P A ESES GEE + EES +DPTP S + N G K L
Sbjct: 122 YEPDGKDDAASEESESGDDEGEEPMDDEESEDDPTPKKSRNKDKNHNNNNNEPVGQKVKL 181
Query: 124 SSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADR 183
+ S T + KL + + T+ S W H +FL PD I D +
Sbjct: 182 AEGS---TFQEKLKNIQSNVKQDAAYDEIVTTSSSLDEPVVWPHQKLEFLQPDKIKDKEG 238
Query: 184 RSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
R P HPDY+ TL+VP +FL +P + QWW +KS NFDCVLFFKVGKFYEL+H DA +G
Sbjct: 239 RRPDHPDYDKSTLHVPEKFLNNLSPGVRQWWVLKSNNFDCVLFFKVGKFYELYHGDADVG 298
Query: 244 ADELACSYMK 253
+EL +YM+
Sbjct: 299 VNELGFTYMR 308
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 72/120 (60%), Gaps = 4/120 (3%)
Query: 274 TPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLR 333
T G FPD+SE L+YF AFDH A+ G I P+ G+D EYD VMD I+ IEK ++TYL
Sbjct: 488 TSGGSFPDLSEELRYFSTAFDHDAAAKTGVIAPQPGMDAEYDVVMDRIEEIEKRLKTYLV 547
Query: 334 TQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKA-KSNHQRVATK-KKNVENYVTPECRG 391
Q HFGC V Y + K K+Y L+VP +A KA KS TK KK Y T E +G
Sbjct: 548 EQERHFGCRVTYFGSDK--KRYQLDVPESHAHKANKSYALEGQTKGKKPSRRYTTAETKG 605
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 9/151 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI---EDKR 446
RGT T DG IA + + C T+F+THYH++ + V +M+ + ED
Sbjct: 797 RGTATYDGTAIAASVVNFLANLKCRTLFSTHYHNLIDYFHNDQRVTLGHMACMVENEDTT 856
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
+ +T+ FLYK G CPKS+GFN A+LAG+P+ ++K ++ ++EA R++
Sbjct: 857 DPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPQGIIKRAFELSKKVEAIALQRKITAKI 916
Query: 507 FASLVKSGEKVDVEELQKALESVKSFESQTK 537
AS SGEK E Q+ L ++K Q K
Sbjct: 917 VAS---SGEK---EFKQQKLHALKDLLQQLK 941
>gi|307172014|gb|EFN63608.1| Probable DNA mismatch repair protein Msh6 [Camponotus floridanus]
Length = 1117
Score = 132 bits (333), Expect = 3e-28, Method: Compositional matrix adjust.
Identities = 54/89 (60%), Positives = 68/89 (76%)
Query: 165 WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCV 224
W H FL P+ I D RR+ K PDY+ +T+YVP +FL QTP M QWW +KS++FDCV
Sbjct: 166 WPHLKLDFLQPEKIRDIQRRTLKDPDYDSRTVYVPVDFLNNQTPAMRQWWELKSKHFDCV 225
Query: 225 LFFKVGKFYELFHMDAVIGADELACSYMK 253
LFFKVGKFYEL+HMDAVIG +EL+ +YM+
Sbjct: 226 LFFKVGKFYELYHMDAVIGVNELSLTYMR 254
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 46/118 (38%), Positives = 67/118 (56%), Gaps = 3/118 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRND 448
RGT T DG IA ++ ++ C T+F+THYHS+ + V +M+ +E +
Sbjct: 983 RGTSTYDGTAIAASVVDALTKLKCRTLFSTHYHSLVEDYKTNKEVTLAHMACMVETGEEE 1042
Query: 449 GI--DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFI 504
+ +T+ FLYKL G CPKS+GFN A LAGIP + K +A +ME N + +FI
Sbjct: 1043 NVSEETVTFLYKLSEGACPKSYGFNAARLAGIPSIITKKAHEIASKMEQETNDKHIFI 1100
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 48/131 (36%), Positives = 73/131 (55%), Gaps = 6/131 (4%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
ES L++ YE P+G FP + E+L YF+ AFDH+EA G I+PK GVD EYD V+
Sbjct: 666 ESNLISHCTQYE---PNGDFPQLREILDYFKTAFDHEEAKKQGCIVPKKGVDAEYDLVLA 722
Query: 320 EIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKK 379
E+ +K++ YL Q HF + + K K+Y +EVP K ++ + +++K
Sbjct: 723 ELAKNKKDLDKYLEKQKQHFDANISFFGTDK--KRYQIEVPESRVKKVGPGYE-LQSQRK 779
Query: 380 NVENYVTPECR 390
+ Y T E +
Sbjct: 780 GFKRYYTAEAK 790
>gi|344291831|ref|XP_003417633.1| PREDICTED: DNA mismatch repair protein Msh6 [Loxodonta africana]
Length = 1282
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 89/229 (38%), Positives = 121/229 (52%), Gaps = 15/229 (6%)
Query: 36 EDDSPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEE 95
E+ P T+ RR S + K + SDSE D GS+ E+ P E S E SSG +
Sbjct: 151 EEVQPKTQGSRRSSRQIKKRRVISDSESDA----GGSDVEFKPDAKEEGSSDEISSGVGD 206
Query: 96 LE-ESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQP--TKKPKLTAPSTPST-PSFPVSD 151
E E + P + + + T NG+ + +S+ P TK+ T ST +F
Sbjct: 207 SESEGLYSPVKVAPKRKKTMTGNGSLKRKNSRKEMPSATKRATGILSETKSTLNAFSAPQ 266
Query: 152 TSETTPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLK 204
SE+ SG D W H ++L + D RR P HPD++ TL+VP +FL
Sbjct: 267 NSESQSHVSGGGDDSSRPTVWYHETLEWLKEEKRRDERRRRPDHPDFDASTLFVPEDFLN 326
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
TP M +WW IKSQNFD V+F+KVGKFYEL+HMDA+IG +EL +MK
Sbjct: 327 SCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVNELGLVFMK 375
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1139 RGTATFDGTAIADAVVQELAENIKCRTLFSTHYHSLVENYSQNVAVRLGHMACMVENECE 1198
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E +LF +
Sbjct: 1199 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMTKSLRLF--R 1256
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L V+VE + K +K
Sbjct: 1257 EVCLASERSTVEVEAVHKLFTLIKEL 1282
Score = 82.0 bits (201), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 42/127 (33%), Positives = 70/127 (55%), Gaps = 3/127 (2%)
Query: 261 STLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDE 320
S LL Q+ +++ P G FPD++ LK ++ AFDH++A G I PKAG D +YD+ + +
Sbjct: 806 SKLLKQVITLQTKNPEGRFPDLTTELKRWDTAFDHEKARKTGLITPKAGFDSDYDQALAD 865
Query: 321 IKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKK 379
I+ E+ + YL Q + GC T++Y + +Y LE+P + + + + KK
Sbjct: 866 IRENEQSLLEYLEKQRSRIGCRTIVYWGIGR--NRYQLEIPESFTIRNLPEEYELKSTKK 923
Query: 380 NVENYVT 386
+ Y T
Sbjct: 924 GCKRYWT 930
>gi|344245100|gb|EGW01204.1| DNA mismatch repair protein Msh6 [Cricetulus griseus]
Length = 1260
Score = 132 bits (333), Expect = 4e-28, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 129/235 (54%), Gaps = 17/235 (7%)
Query: 31 SPAKSEDD-SPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEH 89
+P++SE++ P + PRR S+++VK DSE D +GS+ E+ P + S E
Sbjct: 124 NPSESEEELQPKMQGPRR-SSRQVKKRRVIDSESDL----DGSDVEFKPDTKQEGSSDEM 178
Query: 90 SSGEEELE-ESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPS--TPSTPS 146
SSG + + E + + + + T + R +S+ P+ ++T S T ST S
Sbjct: 179 SSGVGDSDSEGLGTLGKGAPKRKRTVAGHSAFRKKASRKETPSATKRVTQVSSETKSTLS 238
Query: 147 -FPVSDTSETTPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYV 198
F S SE+ SG D W H +L P+ D RR P HPD+N TLYV
Sbjct: 239 AFSASPNSESQAHVSGGGDDSGGLTVWYHETLDWLKPEKRRDEHRRRPDHPDFNSSTLYV 298
Query: 199 PPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
P +FL TP M +WW IKSQNFD V+F+KVGKFYEL+HMDAVIG +EL +MK
Sbjct: 299 PEDFLNSCTPGMRKWWEIKSQNFDLVIFYKVGKFYELYHMDAVIGVNELGLVFMK 353
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + +V +M+ +E++
Sbjct: 1117 RGTATFDGTAIASAVVKELAETIKCRTLFSTHYHSLVEDYSKNVSVRLGHMACMVENECE 1176
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1177 DPSQETITFLYKFIQGACPKSYGFNAARLANLPEEVIRKGHRKAREFEKMNQSLRLF--R 1234
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + + L +K
Sbjct: 1235 EVCLASDRPTVDAEAVHRLLALIKDL 1260
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S L ++ ++++P G FPD+S L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 782 KSKTLRRVVTLQTKSPEGRFPDLSAELNRWDTAFDHEKARKTGLITPKAGFDPDYDQALA 841
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+IK E+ + YL Q + GC T++Y + +Y LE+P +A++ + + K
Sbjct: 842 DIKENEQSLLEYLDKQRSRIGCRTIVYWGIGR--NRYQLEIPENFATRNLPEEYELKSTK 899
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 900 KGCKRYWT 907
>gi|397504284|ref|XP_003822731.1| PREDICTED: DNA mismatch repair protein Msh6 [Pan paniscus]
Length = 1299
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 116/225 (51%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 172 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGDSESE 227
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSK--SGQPTKKPKLTAPSTPST-PSFPVSDTSET 155
P + + + NG+ + SS+ + TK+ + T +T +F SE+
Sbjct: 228 GPNSPVKVARKRKRMVTGNGSLKRKSSRKETSSATKQATSISSETKNTLRAFSAPQNSES 287
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 288 QSHVSGGGDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTP 347
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 348 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMK 392
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1156 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1215
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1216 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 1273
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L +K
Sbjct: 1274 EVCLASERSTVDAEAVHKLLTLIKEL 1299
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 73/136 (53%), Gaps = 3/136 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D
Sbjct: 814 MEEVADGFRSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFD 873
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +I+ E+ + YL Q GC T++Y + +Y LE+P + ++
Sbjct: 874 SDYDQALADIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPE 931
Query: 371 HQRVATKKKNVENYVT 386
+ + KK + Y T
Sbjct: 932 EYELKSTKKGCKRYWT 947
>gi|354474750|ref|XP_003499593.1| PREDICTED: DNA mismatch repair protein Msh6 [Cricetulus griseus]
Length = 1297
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 93/235 (39%), Positives = 129/235 (54%), Gaps = 17/235 (7%)
Query: 31 SPAKSEDD-SPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEH 89
+P++SE++ P + PRR S+++VK DSE D +GS+ E+ P + S E
Sbjct: 161 NPSESEEELQPKMQGPRR-SSRQVKKRRVIDSESDL----DGSDVEFKPDTKQEGSSDEM 215
Query: 90 SSGEEELE-ESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPS--TPSTPS 146
SSG + + E + + + + T + R +S+ P+ ++T S T ST S
Sbjct: 216 SSGVGDSDSEGLGTLGKGAPKRKRTVAGHSAFRKKASRKETPSATKRVTQVSSETKSTLS 275
Query: 147 -FPVSDTSETTPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYV 198
F S SE+ SG D W H +L P+ D RR P HPD+N TLYV
Sbjct: 276 AFSASPNSESQAHVSGGGDDSGGLTVWYHETLDWLKPEKRRDEHRRRPDHPDFNSSTLYV 335
Query: 199 PPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
P +FL TP M +WW IKSQNFD V+F+KVGKFYEL+HMDAVIG +EL +MK
Sbjct: 336 PEDFLNSCTPGMRKWWEIKSQNFDLVIFYKVGKFYELYHMDAVIGVNELGLVFMK 390
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + +V +M+ +E++
Sbjct: 1154 RGTATFDGTAIASAVVKELAETIKCRTLFSTHYHSLVEDYSKNVSVRLGHMACMVENECE 1213
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1214 DPSQETITFLYKFIQGACPKSYGFNAARLANLPEEVIRKGHRKAREFEKMNQSLRLF--R 1271
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + + L +K
Sbjct: 1272 EVCLASDRPTVDAEAVHRLLALIKDL 1297
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S L ++ ++++P G FPD+S L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 819 KSKTLRRVVTLQTKSPEGRFPDLSAELNRWDTAFDHEKARKTGLITPKAGFDPDYDQALA 878
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+IK E+ + YL Q + GC T++Y + +Y LE+P +A++ + + K
Sbjct: 879 DIKENEQSLLEYLDKQRSRIGCRTIVYWGIGR--NRYQLEIPENFATRNLPEEYELKSTK 936
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 937 KGCKRYWT 944
>gi|417413734|gb|JAA53181.1| Putative mismatch repair atpase msh2 muts family, partial [Desmodus
rotundus]
Length = 1280
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 82/225 (36%), Positives = 116/225 (51%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P RR S + K + SDSE D GS+ E+ P E S E SSG + + E
Sbjct: 152 PKVHGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGLGDSDSE 207
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPS---FPVSDTSET 155
S+ +++ + NG+ + S++ P + T+ S+ + + F SE+
Sbjct: 208 SLHSSVKVAAKRKRMVTGNGSLKRKSARKEMPPVTKRATSISSETKSALCAFSAPQNSES 267
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 268 QAHISGGCDDSSRPTVWYHETLEWLKEEKRRDVHRRRPDHPDFDASTLYVPEDFLNSCTP 327
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+F+KVGKFYEL+HMDA+ G +EL +MK
Sbjct: 328 GMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALTGVNELGLVFMK 372
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1137 RGTATFDGTAIASAVVKELAENIKCRTLFSTHYHSLVDDYSQNVAVRLGHMACMVENECE 1196
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E N +LF +
Sbjct: 1197 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKITNSLRLF--R 1254
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L ++
Sbjct: 1255 EVCLASERSTVDAEAVHKLLTMIEEL 1280
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ +++ P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 802 KSKILKQVITLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 861
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+IK E+ + YL Q + GC T++Y + +Y LE+P + + + + K
Sbjct: 862 DIKENEQSLLEYLEKQRSRIGCRTIVYWGIGR--NRYQLEIPENFITHNLPEEYELKSTK 919
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 920 KGCKRYWT 927
>gi|444518975|gb|ELV12486.1| DNA mismatch repair protein Msh6 [Tupaia chinensis]
Length = 1306
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 117/225 (52%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P + RR S + K + SDSE D GS+ E+ P + S E SS + E E
Sbjct: 234 PKMQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDAKDEGSSDEVSSAMGDSESE 289
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPT---KKPKLTAPSTPSTPSFPVSDTSET 155
+ P + + + NG+ + SS+ P+ + P +++ + + +F E+
Sbjct: 290 GLYSPVKVAPKRKRMITGNGSLKRKSSRKEMPSATKRTPGISSETKNTLSAFSSPQPLES 349
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 350 QVHVSGGGDESSRPTVWYHETLEWLKKEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTP 409
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+F+KVGKFYEL+HMDA+IG +EL +MK
Sbjct: 410 GMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVNELGLVFMK 454
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 46/117 (39%), Positives = 70/117 (59%), Gaps = 3/117 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1189 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1248
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
D +TI FLYK + G CPKS+GFN A+LA +PE+V++ G A + E + +LF
Sbjct: 1249 DPSQETITFLYKFIKGACPKSYGFNAAKLANLPEEVIQKGHRKAREFEKMNRSLRLF 1305
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ +++ P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 884 KSKILKQVITLKTKNPEGRFPDLTIELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 943
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q GC T++Y + +Y LE+P +A++ + + K
Sbjct: 944 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFATRNLPEEYELKSTK 1001
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 1002 KGCKRYWT 1009
>gi|410349455|gb|JAA41331.1| mutS homolog 6 [Pan troglodytes]
Length = 1360
Score = 132 bits (332), Expect = 5e-28, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 116/225 (51%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 233 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGDSESE 288
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSK--SGQPTKKPKLTAPSTPST-PSFPVSDTSET 155
P + + + NG+ + SS+ + TK+ + T +T +F SE+
Sbjct: 289 GPNSPVKVARKRKRMVTGNGSLKRKSSRKETSSATKQATSISSETKNTLRAFSAPQNSES 348
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 349 QSHVSGGGDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTP 408
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 409 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMK 453
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1217 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1276
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1277 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 1334
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L +K
Sbjct: 1335 EVCLASERSTVDAEAVHKLLTLIKEL 1360
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E +S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D
Sbjct: 875 MEEVADGFKSKVLKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFD 934
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +I+ E+ + YL Q GC T++Y + +Y LE+P + ++
Sbjct: 935 SDYDQALADIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPE 992
Query: 371 HQRVATKKKNVENYVT 386
+ + KK + Y T
Sbjct: 993 EYELKSTKKGCKRYWT 1008
>gi|410217568|gb|JAA06003.1| mutS homolog 6 [Pan troglodytes]
gi|410261614|gb|JAA18773.1| mutS homolog 6 [Pan troglodytes]
gi|410295678|gb|JAA26439.1| mutS homolog 6 [Pan troglodytes]
Length = 1360
Score = 132 bits (332), Expect = 6e-28, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 116/225 (51%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 233 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGDSESE 288
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSK--SGQPTKKPKLTAPSTPST-PSFPVSDTSET 155
P + + + NG+ + SS+ + TK+ + T +T +F SE+
Sbjct: 289 GPNSPVKVARKRKRMVTGNGSLKRKSSRKETSSATKQATSISSETKNTLRAFSAPQNSES 348
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 349 QSHVSGGGDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTP 408
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 409 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMK 453
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1217 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1276
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1277 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 1334
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L +K
Sbjct: 1335 EVCLASERSTVDAEAVHKLLTLIKEL 1360
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E +S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D
Sbjct: 875 MEEVADGFKSKVLKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFD 934
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +I+ E+ + YL Q GC T++Y + +Y LE+P + ++
Sbjct: 935 SDYDQALADIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPE 992
Query: 371 HQRVATKKKNVENYVT 386
+ + KK + Y T
Sbjct: 993 EYELKSTKKGCKRYWT 1008
>gi|348574694|ref|XP_003473125.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
Msh6-like [Cavia porcellus]
Length = 1354
Score = 131 bits (330), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 87/225 (38%), Positives = 118/225 (52%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P + RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 231 PKMQGSRRSSRQVKKRRVMSDSESDI----GGSDVEFKPDTKEEGSSDEISSGAGDSESE 286
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQP--TKKPKLTAPSTPSTPS-FPVSDTSET 155
++ P ++ + + + + SS+ P TK+ T +T S F V SE+
Sbjct: 287 GLDSPVKAAPKRKKMGIGKIGFKKNSSRKETPSVTKRATGILSETKNTSSAFSVPQNSES 346
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++P TLYVP +FL TP
Sbjct: 347 QAQGSGGGDDSCGPTVWYHETLEWLKKEKRRDEHRRRPDHPDFDPSTLYVPEDFLNSCTP 406
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+F+KVGKFYEL+HMDA++G EL +MK
Sbjct: 407 GMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALVGVSELGLVFMK 451
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 54/144 (37%), Positives = 79/144 (54%), Gaps = 5/144 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1213 RGTATFDGTAIASAVVKELAETIRCRTLFSTHYHSLVEDYSKNVAVRLGHMACMVENECE 1272
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK V G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1273 DPSQETITFLYKFVQGACPKSYGFNAARLAHLPEEVIQKGHRKAREFEKMNQSLRLF--R 1330
Query: 507 FASLVKSGEKVDVEELQKALESVK 530
L +D E L K L +K
Sbjct: 1331 EVCLASERSSIDAEALHKLLTLIK 1354
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 68/128 (53%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ + + P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 879 KSKILKQVVTLQIKNPEGRFPDLTTELNRWDTAFDHEKARRTGLITPKAGFDSDYDQALA 938
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q + GC T++Y + +Y LE+P + + + K
Sbjct: 939 DIRENEQSLLEYLDKQRSRIGCRTIVYWGIGR--NRYQLEIPENFTIHNLPEEYELKSTK 996
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 997 KGCKRYWT 1004
>gi|332813367|ref|XP_003309101.1| PREDICTED: DNA mismatch repair protein Msh6 [Pan troglodytes]
Length = 1399
Score = 131 bits (329), Expect = 1e-27, Method: Compositional matrix adjust.
Identities = 86/225 (38%), Positives = 116/225 (51%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P T+ RR S + K + SDSE D GS+ E+ P E S E SSG + E E
Sbjct: 272 PKTQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDTKEEGSSDEISSGVGDSESE 327
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSK--SGQPTKKPKLTAPSTPST-PSFPVSDTSET 155
P + + + NG+ + SS+ + TK+ + T +T +F SE+
Sbjct: 328 GPNSPVKVARKRKRMVTGNGSLKRKSSRKETSSATKQATSISSETKNTLRAFSAPQNSES 387
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 388 QSHVSGGGDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTP 447
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 448 GMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMK 492
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1256 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1315
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 1316 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 1373
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L +K
Sbjct: 1374 EVCLASERSTVDAEAVHKLLTLIKEL 1399
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E +S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D
Sbjct: 914 MEEVADGFKSKVLKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFD 973
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +I+ E+ + YL Q GC T++Y + +Y LE+P + ++
Sbjct: 974 SDYDQALADIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPE 1031
Query: 371 HQRVATKKKNVENYVT 386
+ + KK + Y T
Sbjct: 1032 EYELKSTKKGCKRYWT 1047
>gi|125978269|ref|XP_001353167.1| GA20021 [Drosophila pseudoobscura pseudoobscura]
gi|54641920|gb|EAL30669.1| GA20021 [Drosophila pseudoobscura pseudoobscura]
Length = 1189
Score = 130 bits (327), Expect = 2e-27, Method: Compositional matrix adjust.
Identities = 87/250 (34%), Positives = 123/250 (49%), Gaps = 17/250 (6%)
Query: 16 ESSTPASSKGKKTSKSPAKSEDDSPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDE 75
E+ T S+K K +P+ E+ KR R + +++ +D +G E +
Sbjct: 64 ETETKPSAKRKLPISTPSDEEELGGRRKRKRIVLPESESEDEMEETKSEDDF--SGDESD 121
Query: 76 YVPPKAEVESESEHSSGEEEL------EESVEDPTPSSSEAEVTPMKN------GNKRGL 123
Y P + + E SG++E EES +DPTP S + N G K L
Sbjct: 122 YEPDGKDDAASEESESGDDEGGEPMDDEESEDDPTPKKSRNKDKNHNNNNNEPVGQKVKL 181
Query: 124 SSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADR 183
+ S T + KL + + T+ S W H +FL PD I D +
Sbjct: 182 AEGS---TFQEKLKNIQSNVKQDAAYDEIVTTSSSLDEPVVWPHQKLEFLQPDKIKDKEG 238
Query: 184 RSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
R P HPDY+ TL+VP +FL +P + QWW +KS NFDCVLFFKVGKFYEL+H DA +G
Sbjct: 239 RRPDHPDYDKSTLHVPEKFLNNLSPGVRQWWVLKSNNFDCVLFFKVGKFYELYHGDADVG 298
Query: 244 ADELACSYMK 253
+EL +YM+
Sbjct: 299 VNELGFTYMR 308
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 59/120 (49%), Positives = 72/120 (60%), Gaps = 4/120 (3%)
Query: 274 TPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLR 333
T G FPD+SE L+YF AFDH A+ G I P+ G+D EYD VMD I+ IEK ++TYL
Sbjct: 732 TSGGSFPDLSEELRYFSTAFDHDAAAKTGVIAPQPGMDAEYDVVMDRIEEIEKRLKTYLV 791
Query: 334 TQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKA-KSNHQRVATK-KKNVENYVTPECRG 391
Q HFGC V Y + K K+Y L+VP +A KA KS TK KK Y T E +G
Sbjct: 792 EQERHFGCRVTYFGSDK--KRYQLDVPESHAHKANKSYALEGQTKGKKPSRRYTTAETKG 849
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/151 (35%), Positives = 81/151 (53%), Gaps = 9/151 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI---EDKR 446
RGT T DG IA + + C T+F+THYH++ + V +M+ + ED
Sbjct: 1041 RGTATYDGTAIAASVVNFLANLKCRTLFSTHYHNLIDYFHNDQRVTLGHMACMVENEDTT 1100
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
+ +T+ FLYK G CPKS+GFN A+LAG+P+ ++K ++ ++EA R++
Sbjct: 1101 DPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPQGIIKRAFELSKKVEAIALQRKITAKI 1160
Query: 507 FASLVKSGEKVDVEELQKALESVKSFESQTK 537
AS SGEK E Q+ L ++K Q K
Sbjct: 1161 VAS---SGEK---EFKQQKLHALKDLLQQLK 1185
>gi|148236863|ref|NP_001089247.1| mutS homolog 6 [Xenopus laevis]
gi|58399508|gb|AAH89270.1| MGC85188 protein [Xenopus laevis]
Length = 1340
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 86/242 (35%), Positives = 121/242 (50%), Gaps = 36/242 (14%)
Query: 35 SEDDSPVTKRPRRKSA-----KRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEH 89
S D+ TK P R+S KR + I+SDS+ + GS+DE+ P + E+
Sbjct: 204 SHDEEVKTKTPSRESKRKGQPKRRRIMIESDSD------NEGSDDEFKPEDSASSDEASS 257
Query: 90 SSGEEELEE---SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPS--- 143
E L E ED +P P+K KRG+ K+ P K+ + TP
Sbjct: 258 GVDEAGLSEPDSEAEDNSPVK-----VPLKR--KRGIPDKASGPKKRLQNEQSETPKRTS 310
Query: 144 ---------TPSFPVSDTSETTPSTSG---AQDWSHNHYQFLHPDHILDADRRSPKHPDY 191
SF ++ E+ +T G W H + +L D R+ DY
Sbjct: 311 NVSTEAKLKLSSFSAPESFESQANTGGTGAVSIWEHEKFDWLQDGKRKDMKRKRQTDADY 370
Query: 192 NPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSY 251
+P TLY+P +FL K TP + +WW +KSQNFD V+F+KVGKFYEL+HMDAVIG +EL ++
Sbjct: 371 DPSTLYIPDDFLNKCTPGVRKWWQLKSQNFDTVIFYKVGKFYELYHMDAVIGVNELGLTF 430
Query: 252 MK 253
MK
Sbjct: 431 MK 432
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 72/124 (58%), Gaps = 3/124 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ +V +M+ +E++
Sbjct: 1199 RGTATFDGTAIAGAVVKELSESIKCRTLFSTHYHSLVEDHSHSQSVRLGHMACMVENECE 1258
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA IP+++++ G A + E+ +LF
Sbjct: 1259 DPSQETITFLYKFIKGACPKSYGFNAARLAHIPDEIIQVGHQKAREFESLTLSLKLFREL 1318
Query: 507 FASL 510
F +L
Sbjct: 1319 FLAL 1322
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 45/138 (32%), Positives = 74/138 (53%), Gaps = 3/138 (2%)
Query: 250 SYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAG 309
S M++ +S++L Q+ + + G FPD+S LK ++ +FDH++A G I PKAG
Sbjct: 853 SIMEDDVAHFKSSILKQIVCVKDKASHGRFPDLSAELKRWDTSFDHEKARKTGVITPKAG 912
Query: 310 VDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAK 368
D +YDE + ++K E+++ YL Q GC TV+Y K +Y +E+P A +
Sbjct: 913 FDPDYDEALKDVKQAEQDLNEYLDKQRKRLGCKTVVYWGTAK--NRYQMEIPENIADRNL 970
Query: 369 SNHQRVATKKKNVENYVT 386
+ + KK + Y T
Sbjct: 971 PEEYTLKSTKKGFKRYWT 988
>gi|391335569|ref|XP_003742162.1| PREDICTED: DNA mismatch repair protein Msh6-like [Metaseiulus
occidentalis]
Length = 1146
Score = 129 bits (325), Expect = 3e-27, Method: Compositional matrix adjust.
Identities = 91/245 (37%), Positives = 125/245 (51%), Gaps = 31/245 (12%)
Query: 16 ESSTPASSKGKKTSKSPAKSEDD-SPVTKRPRRKSAKRVKSAIQSD---SEPDDMLQDNG 71
+S T + KG + + P K E+ P KR R + + ++SD SE +D+
Sbjct: 90 KSLTASGKKGSASKRKPVKQENGVKPKLKRARLEEDSGEEDWMESDPLESEEEDV----S 145
Query: 72 SEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPT 131
S D+Y P K E +LEES D SE EVT + GL S +
Sbjct: 146 SGDDYEPKK-----------DESDLEESYNDDV--ESEGEVTTPSEDDGSGLDSPVKKTP 192
Query: 132 KKPKLT---APSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKH 188
++ + T AP+TP TPS ++ + PS +W H Y+FL D +
Sbjct: 193 RRAQRTPAKAPATPKTPSSSLAQSVSRNPS-----EWLHLSYEFLKEPK--DLSGKKIGD 245
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
DY+P TL+VP F TP + QWW +KS++FD VLFFKVGKFYEL+HMDAVIG + L
Sbjct: 246 ADYDPSTLHVPNSFKNSLTPGVRQWWELKSRHFDTVLFFKVGKFYELYHMDAVIGVENLG 305
Query: 249 CSYMK 253
+YMK
Sbjct: 306 LTYMK 310
Score = 95.5 bits (236), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 51/121 (42%), Positives = 73/121 (60%), Gaps = 8/121 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT TNDG +A L + + T+F+THYH +A+ ++ V +M+ + + D
Sbjct: 1034 RGTSTNDGASLAYAVLAELSKSNRRTLFSTHYHDLAKDIQ---GVYLGHMACVVENDED- 1089
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFAS 509
+VFLYK VPG C KSFGFNVA LAG+P+ +V G A ++E + +L Q F+ KF S
Sbjct: 1090 ---VVFLYKFVPGNCEKSFGFNVARLAGLPQRIVTMGLQRAKELEEQSDLLQRFV-KFMS 1145
Query: 510 L 510
L
Sbjct: 1146 L 1146
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 4/127 (3%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S+LL L + T G FPD+ E L YF+ AFD +A G I+P GVD+E+DE
Sbjct: 705 KSSLLRDLTHL--TTEGGHFPDVKEALNYFDKAFDKTKALKDGKIVPAPGVDEEFDEAQR 762
Query: 320 EIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKK 379
+ ++ + +L+ Q HFG + I S + Y +EVP A KA +H + KK
Sbjct: 763 RVAEVKDSLDEHLQQQMKHFGTSKI-SYTGTGRTAYQIEVPESVAGKATEDHT-LEGHKK 820
Query: 380 NVENYVT 386
+ Y T
Sbjct: 821 GFKRYYT 827
>gi|405958979|gb|EKC25057.1| DNA mismatch repair protein Msh6 [Crassostrea gigas]
Length = 1346
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 92/244 (37%), Positives = 123/244 (50%), Gaps = 42/244 (17%)
Query: 44 RPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSG-------EEEL 96
R R ++AKR + + SDS SEDE+ P E SE E SSG E E
Sbjct: 211 RTRGRAAKRRRIVVASDS--------GESEDEFKPHSDEGSSEDEVSSGVDEDKISEPET 262
Query: 97 EESVEDPTPSSSEAEV---------------TPMKNGNKRGLSSKSGQPTKKPKLTAPST 141
E ++ P S +AEV P K+ K + + + P +
Sbjct: 263 ESEIDSPVKKSRKAEVPSRKRKRPEKNTKPWRPKKSETKEDEAGSEDEASTSPSTSRSLA 322
Query: 142 PSTPSFPVSDTSET---------TPSTSGAQDWSHNHY---QFLHPDHILDADRRSPKHP 189
PSTPS + S+ T G Q+ ++ Y +FL PD I D ++S P
Sbjct: 323 PSTPSVGMKTKSKLASFAAVDLDTKPAKGPQEETNYPYLKLEFLQPDKIKDIKKKSKNDP 382
Query: 190 DYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELAC 249
+Y+PKTLYVP FLK+QTP M QWW +KS+++D VLFFK+GKFYELF+MDA +G EL
Sbjct: 383 EYDPKTLYVPDSFLKQQTPAMRQWWELKSKHYDAVLFFKMGKFYELFNMDAAVGVKELGL 442
Query: 250 SYMK 253
YMK
Sbjct: 443 IYMK 446
Score = 95.5 bits (236), Expect = 7e-17, Method: Compositional matrix adjust.
Identities = 48/116 (41%), Positives = 69/116 (59%), Gaps = 2/116 (1%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA + + + + C T+F+THYHS+ +PN+ +MS +E++ +
Sbjct: 1208 RGTATYDGTAIACAVVRELSESLCCRTLFSTHYHSLVEEFSHDPNIRLGHMSCMVENEGD 1267
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
+TI FLYK G CPKS+GFNVA LA IP++VVK A + E ++LF
Sbjct: 1268 PAEETITFLYKFARGACPKSYGFNVARLANIPDEVVKLAKEKAKEFEFDVERKKLF 1323
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/118 (33%), Positives = 60/118 (50%), Gaps = 1/118 (0%)
Query: 261 STLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDE 320
S LL Q ++ G FPD+ + L +F+NAFDH +A G I+P GV EYD +
Sbjct: 869 SKLLKQTMALDTDDDKGLFPDLKKELDFFDNAFDHAKAKKDGVILPNKGVSPEYDSAKAD 928
Query: 321 IKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+K+ E+ ++ YL Q GC + K +Y +EVP K + +++KK
Sbjct: 929 LKAAERGLEEYLDRQRQRLGCRNLTYWGSGKN-RYQIEVPESALKKVPDEYHLMSSKK 985
>gi|301611818|ref|XP_002935421.1| PREDICTED: DNA mismatch repair protein Msh6 [Xenopus (Silurana)
tropicalis]
Length = 1338
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 91/258 (35%), Positives = 126/258 (48%), Gaps = 30/258 (11%)
Query: 14 DSESSTPASSKGKKTSKSPAKS-EDDSPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGS 72
DSE +G S A+ + PV + + KR + I+SDS+ + GS
Sbjct: 187 DSEEDMELEDEGSSASHDEAEDVKKRQPVRESKKNGKPKRRRITIESDSD------NEGS 240
Query: 73 EDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKN--GNKRGLSSKSGQP 130
+DE+ P + E+ E +L E P S E +P+K KRG K P
Sbjct: 241 DDEFKPEDSASSDEASSGVDEAKLSE------PDSETEEDSPVKVPLKRKRGNPDKPTGP 294
Query: 131 TKKPKLTAPSTP--------------STPSFPVSDTSETTPSTSGAQD-WSHNHYQFLHP 175
K+ + TP S+ S P S S+T +G+ W H + +L
Sbjct: 295 KKRLQDELSETPKRASNVSAEAKLKLSSFSAPESFESQTNAGGTGSVSVWDHEKFDWLQD 354
Query: 176 DHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYEL 235
D R+ DY+P TLYVP +FL K TP M +WW +KSQNFD V+F+KVGKFYEL
Sbjct: 355 GRRKDLKRKKQNDADYDPSTLYVPDDFLNKCTPGMRKWWQLKSQNFDTVIFYKVGKFYEL 414
Query: 236 FHMDAVIGADELACSYMK 253
+HMDAVIG +EL ++MK
Sbjct: 415 YHMDAVIGVNELGLTFMK 432
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 76/140 (54%), Gaps = 3/140 (2%)
Query: 248 ACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPK 307
S ++++ +S++L Q+ + + +TP G FPD+S LK ++ +FDH++A G I PK
Sbjct: 849 VISILEDAAANFKSSILKQIVSIKGKTPQGHFPDLSAELKRWDTSFDHEKARKTGVITPK 908
Query: 308 AGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASK 366
G D +YDE + +IK+ E+++ YL Q C TV+Y K +Y +E+P +
Sbjct: 909 VGFDPDYDEALKDIKTTEQDLNEYLDKQRKRLSCKTVVYWGTAK--NRYQMEIPESVTER 966
Query: 367 AKSNHQRVATKKKNVENYVT 386
+ + KK + Y T
Sbjct: 967 NLPEEYELKSTKKGYKRYWT 986
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ Q + C T+F+THYHS+ V +M+ +E++
Sbjct: 1197 RGTATFDGTAIASAVVKELSQSVKCRTLFSTHYHSLVEDYSHSQAVRLGHMACMVENECE 1256
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
D +TI FLYK + G CPKS+GFN A LA IP+++++ G A + E+ +LF
Sbjct: 1257 DPSQETITFLYKFIKGACPKSYGFNAARLAHIPDEIIQVGHQKAREFESITVSLRLF 1313
>gi|298710503|emb|CBJ25567.1| MutS protein homolog 6 [Ectocarpus siliculosus]
Length = 1372
Score = 129 bits (324), Expect = 4e-27, Method: Compositional matrix adjust.
Identities = 69/149 (46%), Positives = 86/149 (57%), Gaps = 18/149 (12%)
Query: 117 NGNKRGLSSKSGQPTKKPK---------LTAPSTPSTPSFPVSDTSETTPSTSGAQD--- 164
N + R L S PT + L++P++P TP P P G D
Sbjct: 250 NASGRSLQSPVSTPTVRSSPHSSRPFVGLSSPASPPTPKAPAG-----IPLPEGVLDTGR 304
Query: 165 WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCV 224
SH+ + +L+ + + DA+RR P P YNP+TLYVPP FL K+TP M QWW KSQN D V
Sbjct: 305 HSHHSFDWLYKNRV-DANRRRPDDPLYNPRTLYVPPSFLSKETPAMVQWWKFKSQNMDTV 363
Query: 225 LFFKVGKFYELFHMDAVIGADELACSYMK 253
LFFKVGKFYELFH+DA +G EL YMK
Sbjct: 364 LFFKVGKFYELFHVDADVGMQELDLIYMK 392
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 55/96 (57%), Gaps = 4/96 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIG-CLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA ++ CL +FATHYHS+ VA +MS +ED N
Sbjct: 1214 RGTSTFDGTAIAHAVAHYLVKSAKCLAMFATHYHSLVEDWGHHSEVALGHMSCLVED--N 1271
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
G + FLYKL PG CPKSFG NVA LA +P+ V+
Sbjct: 1272 GGEQRVTFLYKLAPGPCPKSFGINVARLAQLPDAVI 1307
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 55/175 (31%), Positives = 84/175 (48%), Gaps = 24/175 (13%)
Query: 228 KVGKFYELFHMDAVIGADELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLK 287
KV F + +D + AD L + S ES LL + S++ G FPDMS +
Sbjct: 840 KVNDFLSV--LDGLEKADRLPEIFKSASV---ESALLRKCVI--SKSEGGQFPDMSSAIS 892
Query: 288 YFENAFDHKEASSAGNIIPKAGVDKEYDEV-------------MDEIKSIEKEIQTYLRT 334
YF NAFD + G I K GVD+++D++ +IK I+ E+ +LR
Sbjct: 893 YFRNAFDAGTSKKKGLIELKPGVDEDFDKIKPRGRYFVWPVLAQIDIKEIKSELDGHLRE 952
Query: 335 QCAHFGCT-VIYSEAQKKQKKYVLEVPSKYASKAKS-NHQRVATKKKNVENYVTP 387
Q GC+ Y + K +KY ++VP +Y SK + + + +KKK + TP
Sbjct: 953 QRKRLGCSDAEYWHSAK--EKYQIQVPERYFSKNRQPSDYELKSKKKGALRFWTP 1005
>gi|170285324|gb|AAI61405.1| LOC100145639 protein [Xenopus (Silurana) tropicalis]
Length = 978
Score = 129 bits (324), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 85/231 (36%), Positives = 117/231 (50%), Gaps = 29/231 (12%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELEES 99
PV + + KR + I+SDS+ + GS+DE+ P + E+ E +L E
Sbjct: 214 PVRESKKNGKPKRRRITIESDSD------NEGSDDEFKPEDSASSDEASSGVDEAKLSE- 266
Query: 100 VEDPTPSSSEAEVTPMKN--GNKRGLSSKSGQPTKKPKLTAPSTP--------------S 143
P S E +P+K KRG K P K+ + TP S
Sbjct: 267 -----PDSETEEDSPVKVPLKRKRGNPDKPTGPKKRLQDELSETPKRASNVSAEAKLKLS 321
Query: 144 TPSFPVSDTSETTPSTSGAQD-WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEF 202
+ S P S S+T +G+ W H + +L D R+ DY+P TLYVP +F
Sbjct: 322 SFSAPESFESQTNAGGTGSVSVWDHEKFDWLQDGRRKDLKRKKQNDADYDPSTLYVPDDF 381
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
L K TP M +WW +KSQNFD V+F+KVGKFYEL+HMDAVIG +EL ++MK
Sbjct: 382 LNKCTPGMRKWWQLKSQNFDTVIFYKVGKFYELYHMDAVIGVNELGLTFMK 432
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 68/114 (59%), Gaps = 3/114 (2%)
Query: 248 ACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPK 307
S ++++ +S++L Q+ + + +TP G FPD+S LK ++ +FDH++A G I PK
Sbjct: 849 VISILEDAAANFKSSILKQIVSIKGKTPQGHFPDLSAELKRWDTSFDHEKARKTGVITPK 908
Query: 308 AGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVP 360
G D +YDE + +IK+ E+++ YL Q C TV+Y K +Y +E+P
Sbjct: 909 VGFDPDYDEALKDIKTTEQDLNEYLDKQRKRLSCKTVVYWGTAK--NRYQMEIP 960
>gi|291386823|ref|XP_002709926.1| PREDICTED: mutS homolog 6 [Oryctolagus cuniculus]
Length = 1361
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 82/226 (36%), Positives = 116/226 (51%), Gaps = 16/226 (7%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P + RR S + K + SDSE D GS+ E+ P E S E SS + E E
Sbjct: 232 PKLQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDAKEEGSSDEVSSAVGDSESE 287
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPT---KKPKLTAPSTPSTPSFPVSDTSET 155
++ P + + NG+ + +S+ P+ + P + A + + +F SE+
Sbjct: 288 GLDSPVKVVPKRKRMVTGNGSLKRKNSRKEMPSATKRAPGILAETKSTLSTFSAPQNSES 347
Query: 156 TPSTSGAQD--------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQT 207
SG W H ++L + DA RR P HPD++ TL+VP +FL T
Sbjct: 348 PAQVSGGGGDDSGRPTTWYHETLEWLKKEKRRDAHRRRPDHPDFDASTLHVPEDFLNSCT 407
Query: 208 PCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
P M +WW IKSQNFD V+F+KVGKFYEL+HMDA+IG EL +MK
Sbjct: 408 PGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVSELGLVFMK 453
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1218 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNDAVRLGHMACMVENECE 1277
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E +LF +
Sbjct: 1278 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMTQSLRLF--R 1335
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L +D E L K L +K
Sbjct: 1336 EVCLASERSTIDAEALHKLLTLIKEL 1361
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 72/128 (56%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S LLTQ+ +++ P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 883 KSKLLTQVVTLQTKNPEGRFPDLTMELHRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 942
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q + GC T++Y + +Y LE+P + ++ + + K
Sbjct: 943 DIRENEQSLLDYLEKQRSRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPEEYELKSTK 1000
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 1001 KGCKRYWT 1008
>gi|350582426|ref|XP_003354885.2| PREDICTED: DNA mismatch repair protein Msh6-like, partial [Sus
scrofa]
Length = 1011
Score = 129 bits (323), Expect = 5e-27, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 116/225 (51%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P + RR S K + SDSE D GS+ E+ P E S E SSG + + E
Sbjct: 80 PKVQGSRRSSRHIKKRRVISDSESDV----GGSDVEFKPDTKEEGSSDEMSSGVGDSDSE 135
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQP--TKKPKLTAPSTPSTPS-FPVSDTSET 155
++ P + + + NG+ + SS+ P TK+ + T ST S F SE
Sbjct: 136 GLDSPVKIAPKRKRMVTGNGSLKRKSSRKEMPSATKRAIGISSETRSTLSAFSAPQNSEP 195
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 196 QAHISGGCDDSNRPTVWYHETLEWLKEERRRDVHRRRPDHPDFDASTLYVPEDFLNSCTP 255
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+F+KVGKFYEL+HMDA+IG EL +MK
Sbjct: 256 GMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVSELGLVFMK 300
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ +++ P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 730 KSKILKQVLTLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 789
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q + GC T++Y + +Y LE+P + ++ + + K
Sbjct: 790 DIRENEQSLLEYLEKQRSRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPEEYELKSTK 847
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 848 KGCKRYWT 855
>gi|426223707|ref|XP_004023308.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh6
[Ovis aries]
Length = 1352
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 81/225 (36%), Positives = 114/225 (50%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P + RR S + K + SDSE D GS+ E+ E S E SSG + + E
Sbjct: 224 PKVQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKLDAKEEGSSDEISSGMGDSDSE 279
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTP---STPSFPVSDTSET 155
++ P + + + NG+ + SS+ P+ + T S+ + +F V E+
Sbjct: 280 GLDTPVKVAPKRKRMVTGNGSLKRKSSRKEMPSATKRATGISSEIKNTLSAFSVPQNPES 339
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 340 QAHISGGCDDSNRPTVWYHETLEWLKEEKRRDVHRRRPDHPDFDASTLYVPEDFLNSCTP 399
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+F+KVGKFYEL+ DA+IG EL +MK
Sbjct: 400 GMRKWWQIKSQNFDLVIFYKVGKFYELYRRDALIGVSELGLVFMK 444
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 51/146 (34%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1209 RGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNIAVRLGHMACMVENECE 1268
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E +LF +
Sbjct: 1269 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMTQSLRLF--R 1326
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD + + K L ++
Sbjct: 1327 EVCLASERSTVDADAVHKLLTLIEEL 1352
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ +++ P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 874 KSKILKQVLTLQTKNPEGRFPDLTSELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 933
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q + GC T++Y + +Y LE+P + ++ + + K
Sbjct: 934 DIRENEQSLLEYLEKQRSRIGCRTIVYWGIGR--NRYQLEIPENFITRNLPEEYELKSTK 991
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 992 KGCKRYWT 999
>gi|335285527|ref|XP_003354884.1| PREDICTED: DNA mismatch repair protein Msh6-like [Sus scrofa]
Length = 1362
Score = 129 bits (323), Expect = 6e-27, Method: Compositional matrix adjust.
Identities = 88/225 (39%), Positives = 116/225 (51%), Gaps = 15/225 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELE-E 98
P + RR S K + SDSE D GS+ E+ P E S E SSG + + E
Sbjct: 234 PKVQGSRRSSRHIKKRRVISDSESDV----GGSDVEFKPDTKEEGSSDEMSSGVGDSDSE 289
Query: 99 SVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQP--TKKPKLTAPSTPSTPS-FPVSDTSET 155
++ P + + + NG+ + SS+ P TK+ + T ST S F SE
Sbjct: 290 GLDSPVKIAPKRKRMVTGNGSLKRKSSRKEMPSATKRAIGISSETRSTLSAFSAPQNSEP 349
Query: 156 TPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
SG D W H ++L + D RR P HPD++ TLYVP +FL TP
Sbjct: 350 QAHISGGCDDSNRPTVWYHETLEWLKEERRRDVHRRRPDHPDFDASTLYVPEDFLNSCTP 409
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW IKSQNFD V+F+KVGKFYEL+HMDA+IG EL +MK
Sbjct: 410 GMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVSELGLVFMK 454
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 52/140 (37%), Positives = 76/140 (54%), Gaps = 5/140 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1219 RGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1278
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E +LF +
Sbjct: 1279 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMTQSLRLF--R 1336
Query: 507 FASLVKSGEKVDVEELQKAL 526
L VD E + K L
Sbjct: 1337 EVCLASERSTVDAEAVHKLL 1356
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ +++ P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 884 KSKILKQVLTLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 943
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q + GC T++Y + +Y LE+P + ++ + + K
Sbjct: 944 DIRENEQSLLEYLEKQRSRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPEEYELKSTK 1001
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 1002 KGCKRYWT 1009
>gi|380011142|ref|XP_003689671.1| PREDICTED: probable DNA mismatch repair protein Msh6-like [Apis
florea]
Length = 1126
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 52/89 (58%), Positives = 67/89 (75%)
Query: 165 WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCV 224
W H Y FL P+ I D +++ DY+ KTLYVP +FL +QTP M QWW +KS++FDCV
Sbjct: 177 WPHLKYDFLQPNKIRDINKKPLSDSDYDSKTLYVPLDFLNQQTPAMRQWWELKSKHFDCV 236
Query: 225 LFFKVGKFYELFHMDAVIGADELACSYMK 253
LFFK+GKFYEL+HMDAVIG +EL +YM+
Sbjct: 237 LFFKLGKFYELYHMDAVIGVNELHLTYMR 265
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 41/117 (35%), Positives = 66/117 (56%), Gaps = 3/117 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRND 448
RGT T DG IA + ++ C T+F+THYHS+ + + + +M+ +E++ D
Sbjct: 992 RGTSTYDGTAIAAAVVNALTKLNCRTLFSTHYHSLVEDYKNDKKITLAHMACMVENEEQD 1051
Query: 449 GI--DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
+ +T+ FLYKL G CPKS+GFN A L G+P + ++ ++E N + LF
Sbjct: 1052 EVSQETVTFLYKLSEGACPKSYGFNAARLGGVPAIITNRAHEISKKLEQETNRKHLF 1108
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/116 (38%), Positives = 68/116 (58%), Gaps = 3/116 (2%)
Query: 275 PSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRT 334
P G FP + E L YF+ AFDH+EA G I+PK GVD EYD V+ E++ I+K+ + YL
Sbjct: 687 PDGEFPSLRESLDYFKTAFDHEEAKRVGCIVPKKGVDSEYDAVLMELEEIKKDSEQYLEK 746
Query: 335 QCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
Q HFG V + + K K+Y +E+P K + + + +++K + Y T E +
Sbjct: 747 QKKHFGVKVTFHGSDK--KRYQIEIPDSQTKKVGAGFE-LQSQRKGYKRYYTAESK 799
>gi|312072605|ref|XP_003139141.1| hypothetical protein LOAG_03556 [Loa loa]
gi|307765695|gb|EFO24929.1| hypothetical protein LOAG_03556 [Loa loa]
Length = 1204
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/245 (35%), Positives = 120/245 (48%), Gaps = 19/245 (7%)
Query: 30 KSPAKSEDDSPV--TKRP--------RRKSAKRVKSAIQSDSEPDD--MLQDNGSED--- 74
+S + EDD+ TKRP ++ KR + + SDSE +D M+ N SE+
Sbjct: 54 ESDIRMEDDTKNLHTKRPPDEELSSLKKSCTKRRRVVVSSDSEDNDVEMVNLNKSEENMQ 113
Query: 75 ---EYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGL-SSKSGQP 130
Y K+ + S E ++ +SS+ V+ M +S+
Sbjct: 114 QSPRYRSLKSGLLSHLNSPRRENISSQTSSVYESTSSKPVVSEMTISFINSFRASEQDSS 173
Query: 131 TKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPD 190
KL + S TT + + H ++FL PD I DAD+R HPD
Sbjct: 174 VSSSKLGCSTDGDVLDESASTACLTTVPDIESVRFPHLDFEFLQPDRIRDADKRLRSHPD 233
Query: 191 YNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
Y P+TLYVP F+KKQTP QWW KS FD +LFFKVGKFYE++HMDAVIG + L +
Sbjct: 234 YCPRTLYVPDAFMKKQTPGHRQWWAAKSAYFDTILFFKVGKFYEMYHMDAVIGVENLNLN 293
Query: 251 YMKES 255
YM+ S
Sbjct: 294 YMRGS 298
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 60/99 (60%), Gaps = 4/99 (4%)
Query: 390 RGTGTNDGCVIA-RVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI---EDK 445
RGT T DG IA V L+ ++ C T F+THYH + + ++ ++ +M+ I E+
Sbjct: 1059 RGTSTYDGTAIAYAVLLDMATRLNCRTFFSTHYHGLCKAVQNISSIKAAHMACIVENENA 1118
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
+ ++ + FLY L GICPKS+GF A+++G+ +V++
Sbjct: 1119 EDPTMENVTFLYTLTDGICPKSYGFFAAKISGLKTEVIR 1157
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/110 (31%), Positives = 56/110 (50%), Gaps = 2/110 (1%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
FPD+S L++F+NAF+ +A G I+P+ GV KEYD+ + +K E+ YL
Sbjct: 750 FPDISNDLEHFKNAFNRDKAQEEGIIVPEKGVIKEYDDTIYNVKECIHELDLYLNVIRRQ 809
Query: 339 FGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPE 388
C+ I + +Y LE+P A S+ + + +K + VT E
Sbjct: 810 LHCSNINFFGSGRS-RYQLEIPEGIAMNL-SHEFELKSSRKGYKRMVTDE 857
>gi|195327727|ref|XP_002030569.1| GM24498 [Drosophila sechellia]
gi|194119512|gb|EDW41555.1| GM24498 [Drosophila sechellia]
Length = 1192
Score = 127 bits (320), Expect = 1e-26, Method: Compositional matrix adjust.
Identities = 87/279 (31%), Positives = 136/279 (48%), Gaps = 36/279 (12%)
Query: 4 DSKESPEKKGDSESSTPASSKGKKTSKSPAKSE-----DDSPVTKRPRRKSAKRVKSAIQ 58
D S +K + ++ P K+ PA DD P + + +RK R+ +
Sbjct: 39 DPNASKSEKENLQNQQPKVKDSKEKDSKPAAKRKLPISDDEPDSGQRKRK---RIVQP-E 94
Query: 59 SDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEV---TPM 115
SDSEP+ ++ SED++ ++ E + E+ + ++ + V++ +PS ++ V TP
Sbjct: 95 SDSEPE--MEVTKSEDDFSDCVSDYEPD-ENEASDDSVSSGVDEVSPSENDMSVDSPTPK 151
Query: 116 KNGNKRGLSSKSGQPTKKP---------------------KLTAPSTPSTPSFPVSDTSE 154
K+ K + + + +P KL + + D
Sbjct: 152 KSRKKSKVLNNNNNNNNEPSSKKVKLESSIQLAEGATFQEKLKNLQSNAKQDASYDDIVT 211
Query: 155 TTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWW 214
T S W H +FL PD I D + R P HPDY+ TL+VP +FL +P + QWW
Sbjct: 212 NTSSLDEPVVWPHQKLEFLQPDKIKDKEGRRPDHPDYDKSTLHVPEKFLNGLSPGVRQWW 271
Query: 215 TIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
+KS N+DCVLFFKVGKFYEL+HMDA +G +EL +YM+
Sbjct: 272 VLKSDNYDCVLFFKVGKFYELYHMDADVGVNELGFTYMR 310
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 61/131 (46%), Positives = 76/131 (58%), Gaps = 6/131 (4%)
Query: 265 TQLCNYESQTP--SGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIK 322
T L +Q P G FPD+S+ L+YF AFDH A+ G I P+AG+D EYD MD I
Sbjct: 723 TALLKRLTQLPESGGSFPDLSKQLQYFATAFDHDAAAKTGVIAPQAGMDAEYDAAMDSIG 782
Query: 323 SIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKA-KSNHQRVATK-KKN 380
IEK +++YL Q HFGC + Y + K K+Y L+VP +ASKA KS TK KK
Sbjct: 783 EIEKRLKSYLVEQERHFGCRITYFGSDK--KRYQLDVPETHASKANKSYTLEGQTKGKKA 840
Query: 381 VENYVTPECRG 391
Y T E RG
Sbjct: 841 SRRYTTAETRG 851
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI---EDKR 446
RGT T DG IA + + C T+F+THYH++ + + +M+ + ED
Sbjct: 1043 RGTATYDGTAIAASVVNFLANLKCRTLFSTHYHNLIDFFHNDKRITLGHMACMVENEDNA 1102
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
+ +T+ FLYK G CPKS+GFN A+LAG+P+ ++K ++ ++EA
Sbjct: 1103 DPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPQGIIKRAYELSKKVEA 1151
>gi|195590405|ref|XP_002084936.1| GD12570 [Drosophila simulans]
gi|194196945|gb|EDX10521.1| GD12570 [Drosophila simulans]
Length = 1192
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 96/277 (34%), Positives = 135/277 (48%), Gaps = 32/277 (11%)
Query: 4 DSKESPEKKGDSESSTPASSKGKKTSKSPAKSE-----DDSPVTKRPRRKSAKRVKSAIQ 58
D S +K + ++ P + K+ PA DD P + + +RK R+ +
Sbjct: 39 DPNASKSEKENLQNQQPKVNDSKEKDSKPAAKRKLPISDDEPDSGQRKRK---RIVQP-E 94
Query: 59 SDSEPDDMLQDNGSED------EYVPPKAEVESESEHSSGEE----ELEESVEDPTPSSS 108
SDSEP+ M ED +Y P + E +S S +E E + SV+ PTP S
Sbjct: 95 SDSEPE-MEVTKSEEDFSDCVSDYEPDENEASDDSVSSGVDEVSPSENDMSVDSPTPKKS 153
Query: 109 --EAEVTPMKNGNKRGLSSKSGQ----------PTKKPKLTAPSTPSTPSFPVSDTSETT 156
+++V N N SSK + T + KL + + D T
Sbjct: 154 RKKSKVLNNNNNNNNEPSSKKVKLESSMQLAEGATFQEKLKNLQSNAKQDASYDDIVTNT 213
Query: 157 PSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTI 216
S W H +FL PD I D + R P HPDY+ TL+VP +FL +P + QWW +
Sbjct: 214 SSLDEPVVWPHQKLEFLQPDKIKDKEGRRPDHPDYDKSTLHVPEKFLNGLSPGVRQWWVL 273
Query: 217 KSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
KS N+DCVLFFKVGKFYEL+HMDA +G +EL +YM+
Sbjct: 274 KSDNYDCVLFFKVGKFYELYHMDADVGVNELGFTYMR 310
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 75/131 (57%), Gaps = 6/131 (4%)
Query: 265 TQLCNYESQTP--SGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIK 322
T L +Q P G FPD+S+ L+YF AFDH A+ G I P+AG+D EYD MD I
Sbjct: 723 TALLKRLTQLPESGGSFPDLSKQLQYFATAFDHDAAAKTGVIAPQAGMDAEYDAAMDAIG 782
Query: 323 SIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKA-KSNHQRVATK-KKN 380
IEK +++YL Q HFGC + Y + K K+Y L+VP +ASKA KS TK KK
Sbjct: 783 EIEKRLKSYLVEQERHFGCRITYFGSDK--KRYQLDVPESHASKANKSYTLEGQTKGKKA 840
Query: 381 VENYVTPECRG 391
Y T E R
Sbjct: 841 SRRYTTAETRA 851
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI---EDKR 446
RGT T DG IA + + C T+F+THYH++ + + +M+ + ED
Sbjct: 1043 RGTATYDGTAIAASVVNFLANLKCRTLFSTHYHNLIDFFHNDKRITLGHMACMVENEDNA 1102
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
+ +T+ FLYK G CPKS+GFN A+LAG+P+ ++K ++ ++EA
Sbjct: 1103 DPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPQGIIKRAYELSKKVEA 1151
>gi|126304451|ref|XP_001382177.1| PREDICTED: DNA mismatch repair protein Msh6 [Monodelphis domestica]
Length = 1423
Score = 127 bits (318), Expect = 2e-26, Method: Compositional matrix adjust.
Identities = 91/259 (35%), Positives = 123/259 (47%), Gaps = 22/259 (8%)
Query: 7 ESPEKKGDSESSTPASSKGKKTSKSPAKSEDDSPVTKRPRRKSAKRVKSAIQSDSEPDDM 66
+ P + E +S + + + E+ P +R +A+ K + SDSE D
Sbjct: 269 DEPSDPDEEEMEVAVASASENSGEDIESEEEVRPKRHLAKRSTARNKKRRVVSDSESDI- 327
Query: 67 LQDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPT--PSSSEAEVTPMK-------- 116
GS+ E+ P E S E SSG E + + P P T K
Sbjct: 328 ---GGSDVEFKPDTKEEGSSDEASSGMGESDSDTDSPVKAPKRRRGNSTLKKKSLGGYTP 384
Query: 117 NGNKR--GLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLH 174
N +KR G+SS++ K L A S P + S Q W H ++L
Sbjct: 385 NVSKRVVGVSSET-----KITLNAFSAPQNFESQAHVSGGGDGSHGSTQ-WYHETLEWLK 438
Query: 175 PDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYE 234
DA RR P H DY+P T++VP +FL TP M +WW IKSQNFD V+F+KVGKFYE
Sbjct: 439 EGKRKDACRRRPDHSDYDPNTVHVPEDFLNTCTPGMRRWWQIKSQNFDLVIFYKVGKFYE 498
Query: 235 LFHMDAVIGADELACSYMK 253
L+HMDAVIG +EL +MK
Sbjct: 499 LYHMDAVIGVNELGLVFMK 517
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1280 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVCLGHMACMVENECE 1339
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE++++ G A + E +LF
Sbjct: 1340 DPSQETITFLYKFINGACPKSYGFNAARLARLPEEIIQKGHRKAREFEKTTQSLRLFREV 1399
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
+L SG DV+ + K L +K
Sbjct: 1400 CLALENSG--ADVQAIHKLLTLIKEL 1423
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 66/128 (51%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ ++Q G FP+++ L ++ AFDH++A G I PKAG D +YD +
Sbjct: 944 KSKILKQIITLQTQNSGGRFPELTTELNRWDTAFDHEKARKTGIITPKAGFDSDYDHALA 1003
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+IK E+ + YL Q GC +++Y K +Y LE+P + + + K
Sbjct: 1004 DIKDNEQSLLEYLEKQRKRIGCRSIVYWGVGK--NRYQLEIPESFTLHDLPEEYELKSTK 1061
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 1062 KGCKRYWT 1069
>gi|301117392|ref|XP_002906424.1| DNA mismatch repair protein Msh6, putative [Phytophthora infestans
T30-4]
gi|262107773|gb|EEY65825.1| DNA mismatch repair protein Msh6, putative [Phytophthora infestans
T30-4]
Length = 1245
Score = 126 bits (316), Expect = 4e-26, Method: Compositional matrix adjust.
Identities = 58/117 (49%), Positives = 78/117 (66%), Gaps = 1/117 (0%)
Query: 137 TAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTL 196
+ P++ + S P++D S +GA + H+ +LH + D + +P PDY+P+TL
Sbjct: 221 STPTSSTKKSAPLADGPALPSSVAGAGNHIHDSLPWLHEER-RDINGNTPDSPDYDPRTL 279
Query: 197 YVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
+PPEF+KK+TP M QWW +KS+N D VLFFKVGKFYELFHMDA IG EL YMK
Sbjct: 280 KIPPEFVKKETPAMVQWWEVKSRNMDTVLFFKVGKFYELFHMDADIGFKELNLIYMK 336
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 46/106 (43%), Positives = 62/106 (58%), Gaps = 3/106 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA +E L I C T+FATHYHS+ E+ V+ +M I D N+
Sbjct: 1095 RGTSTFDGTAIAYSVVEHLLSDIQCRTMFATHYHSLVEEYVEDDRVSLGHMGCIVDPENE 1154
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ FLYKL G+CPKS+G NVA LA +P++V++ + Q E
Sbjct: 1155 --RKVTFLYKLEDGMCPKSYGINVAMLAKLPDEVIECAAKKSEQFE 1198
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 41/115 (35%), Positives = 65/115 (56%), Gaps = 1/115 (0%)
Query: 277 GCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQC 336
G FPD++E L++F+ +FD A +G I+P+AG+D E+D EI +E E+ YL Q
Sbjct: 782 GHFPDLTEKLEFFKRSFDQASAKKSGVIVPQAGIDPEFDAACAEIAEVEAELADYLSEQR 841
Query: 337 AHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRG 391
+ C I +KK+ +Y LEVP SK ++ + ++KK + + TP R
Sbjct: 842 SALRCRQISYWGKKKEDRYQLEVPESALSKQPKEYE-LKSRKKGYKRFHTPTIRA 895
>gi|170590105|ref|XP_001899813.1| MutS domain III family protein [Brugia malayi]
gi|158592732|gb|EDP31329.1| MutS domain III family protein [Brugia malayi]
Length = 1182
Score = 125 bits (315), Expect = 5e-26, Method: Compositional matrix adjust.
Identities = 60/121 (49%), Positives = 73/121 (60%)
Query: 135 KLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPK 194
KL S P S T + + + H + FL PD I DAD+R HPDY P+
Sbjct: 159 KLDRSSDRDMPDENASPACLDTETDVDSMRFPHLDFDFLQPDRIRDADKRLRSHPDYCPR 218
Query: 195 TLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKE 254
TL+VP F+KKQTP QWW KS FD VLFFKVGKFYE++HMDAVIG + L +YM+
Sbjct: 219 TLFVPDAFMKKQTPGHRQWWAAKSAYFDTVLFFKVGKFYEMYHMDAVIGVENLNLNYMRG 278
Query: 255 S 255
S
Sbjct: 279 S 279
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/140 (28%), Positives = 75/140 (53%), Gaps = 11/140 (7%)
Query: 390 RGTGTNDGCVIAR-VTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI---EDK 445
RGT T DG +A V L+ ++ C T F+THYH++ + + ++ +M+ I E
Sbjct: 1037 RGTSTYDGTAVAYAVLLDVATRLNCRTFFSTHYHTLCKAVENVTSIKAAHMACIVENESA 1096
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN------- 498
+ ++ + FLY L G+CPKS+GF A+++G+ +V++ + ++ R
Sbjct: 1097 EDPTMENVTFLYTLADGMCPKSYGFFAAKISGLKAEVIRAAFIASRHLDERKTRKERMAE 1156
Query: 499 LRQLFIHKFASLVKSGEKVD 518
LR+L ++K S + E ++
Sbjct: 1157 LRKLALNKECSTAQLRETIN 1176
Score = 58.5 bits (140), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 42/145 (28%), Positives = 72/145 (49%), Gaps = 11/145 (7%)
Query: 246 ELACSYMKESGCTGES--TLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGN 303
+L +MK G + E+ +LL + Y FPD+SE L++F++AF+ +A G
Sbjct: 700 DLRIEFMKHFGKSQETIPSLLERCFGYR-------FPDISEDLQHFKSAFNRDKALEDGI 752
Query: 304 IIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKY 363
I+P+ G+ KEYD+ + +K E+ YL C+ I + +Y LE+P +
Sbjct: 753 IVPEKGIIKEYDDAISNVKECIHELDLYLNVIRKQLHCSNINFFGSGRS-RYQLEIPEEI 811
Query: 364 ASKAKSNHQRVATKKKNVENYVTPE 388
A S+ + + +K + VT E
Sbjct: 812 AMNL-SHEFGLKSSRKGYKRMVTDE 835
>gi|395829622|ref|XP_003787948.1| PREDICTED: DNA mismatch repair protein Msh6-like isoform 2
[Otolemur garnettii]
Length = 1056
Score = 125 bits (314), Expect = 6e-26, Method: Compositional matrix adjust.
Identities = 68/150 (45%), Positives = 84/150 (56%), Gaps = 11/150 (7%)
Query: 115 MKNGN---KRGLSSKSGQPTKKPKLTAPSTPSTPS-FPVSDTSETTPSTSGAQD------ 164
M GN KR S K TK+ + T ST S F SE+ SG D
Sbjct: 1 MITGNGSHKRKGSRKEMPSTKRATGISSETKSTLSAFSAPQNSESQAHVSGGGDDSSRPT 60
Query: 165 -WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDC 223
W H ++L + D RR P HPD++ TLYVP +FL TP M +WW IKSQNFD
Sbjct: 61 IWYHETLEWLKKEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDL 120
Query: 224 VLFFKVGKFYELFHMDAVIGADELACSYMK 253
V+F+KVGKFYEL+HMDA+IG +EL +MK
Sbjct: 121 VIFYKVGKFYELYHMDALIGVNELGLVFMK 150
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 80/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 913 RGTATFDGTAIASAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 972
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 973 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 1030
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L + VD E + K L +K
Sbjct: 1031 EVCLASERKTVDAEAVHKLLTLIKEL 1056
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ ++++ G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 579 KSKILKQIITLKTKSSQGHFPDLTVELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 638
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q GC T++Y + +Y LE+P + ++ + + K
Sbjct: 639 DIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPEEYELKSTK 696
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 697 KGCKRYWT 704
>gi|194220748|ref|XP_001498011.2| PREDICTED: DNA mismatch repair protein Msh6-like [Equus caballus]
Length = 983
Score = 125 bits (313), Expect = 7e-26, Method: Compositional matrix adjust.
Identities = 87/231 (37%), Positives = 124/231 (53%), Gaps = 16/231 (6%)
Query: 35 SEDDSPVTKRPRRKSAKRVK-SAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGE 93
SE++ P + R+S++++K + SDSE D GS+ E+ P E S E SSG
Sbjct: 209 SEEEVPPKVQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDAKEEGSSDEISSGV 264
Query: 94 EELE-ESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPS--TPSTPS-FPV 149
+ + E ++ P + + NG+ + +S+ P+ + T+ S T ST S F
Sbjct: 265 GDSDSEGLDSPVKVVPKRKRMVTGNGSLKKKTSRKEMPSATKRATSISSETKSTLSAFSA 324
Query: 150 SDTSETTPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEF 202
SE+ SG D W H ++L + D RR HPD++ TLYVP +F
Sbjct: 325 PQNSESQAHVSGGCDDGSRPTIWYHETLEWLKEEKRRDLHRRRRDHPDFDASTLYVPEDF 384
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
L TP M +WW IKSQNFD V+F+KVGKFYEL+HMDA+IG EL +MK
Sbjct: 385 LNSCTPGMRKWWQIKSQNFDLVIFYKVGKFYELYHMDALIGVSELGLVFMK 435
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 78/146 (53%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 840 RGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 899
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA IPE+V++ G A + E +LF +
Sbjct: 900 DPSQETITFLYKFIKGACPKSYGFNAARLANIPEEVIQKGHRKAREFEKMTQSLRLF--R 957
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L ++
Sbjct: 958 EVCLASERSSVDAEGVHKLLTLIQEL 983
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/128 (31%), Positives = 71/128 (55%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ +++ P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 505 KSKILKQVITLQTKNPEGRFPDLTIELNRWDTAFDHEKARRTGLITPKAGFDSDYDQALA 564
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q + GC T++Y + +Y LE+P + ++ + + K
Sbjct: 565 DIRENEQSLLEYLEKQRSRIGCRTIVYWGIGR--NRYQLEIPENFITRNLPEEYELKSTK 622
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 623 KGCKRYWT 630
>gi|431912701|gb|ELK14719.1| DNA mismatch repair protein Msh6 [Pteropus alecto]
Length = 1172
Score = 124 bits (312), Expect = 9e-26, Method: Compositional matrix adjust.
Identities = 81/221 (36%), Positives = 108/221 (48%), Gaps = 35/221 (15%)
Query: 34 KSEDD-SPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSG 92
+SED+ P + RR S + K + SDSE D GS+ E+ P E S E SSG
Sbjct: 225 ESEDEVRPKVQGSRRSSRQIKKRRVISDSESDI----GGSDVEFKPDAKEEGSSDEISSG 280
Query: 93 EEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDT 152
M + + GL S K+ ++ + S S D+
Sbjct: 281 ----------------------MGDSDSEGLQSSVKVAPKRKRMNSESQAHV-SGGCDDS 317
Query: 153 SETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQ 212
S T W H ++L D RR P HPD++ TLYVP +FL TP M +
Sbjct: 318 SRPTV-------WYHETLEWLKDGKRRDMHRRRPDHPDFDASTLYVPEDFLNSCTPGMRK 370
Query: 213 WWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
WW IKSQNFD V+F+KVGKFYEL+HMDA++G +EL +MK
Sbjct: 371 WWQIKSQNFDLVIFYKVGKFYELYHMDALVGVNELGLVFMK 411
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 53/147 (36%), Positives = 81/147 (55%), Gaps = 7/147 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 1029 RGTATFDGTAIANAVVKELAENIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 1088
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME-ARHNLRQLFIH 505
D +TI FLYK + G CPKS+GFN A +A +PE+V++ G A + E H+LR +
Sbjct: 1089 DPSQETITFLYKFIKGACPKSYGFNAARVANLPEEVIQKGHRKAREFEKMTHSLR---LF 1145
Query: 506 KFASLVKSGEKVDVEELQKALESVKSF 532
+ L VD E + K L S++
Sbjct: 1146 REVCLASERSTVDAETVHKLLASIEEL 1172
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/128 (30%), Positives = 70/128 (54%), Gaps = 3/128 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S +L Q+ +++ P G FPD++ L ++ AFDH++A G I PKAG D +YD+ +
Sbjct: 694 KSKILKQIVTMQTKNPEGHFPDLTIELNRWDTAFDHEKARKTGLITPKAGFDSDYDQALA 753
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I+ E+ + YL Q + GC +++Y + +Y LE+P + + + + K
Sbjct: 754 DIRENEQSLLEYLEKQRSRIGCRSIVYWGIGR--NRYQLEIPENFITHNLPEEYELKSTK 811
Query: 379 KNVENYVT 386
K + Y T
Sbjct: 812 KGCKRYWT 819
>gi|358331876|dbj|GAA30349.2| DNA mismatch repair protein MSH6 [Clonorchis sinensis]
Length = 835
Score = 124 bits (310), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/94 (53%), Positives = 67/94 (71%)
Query: 162 AQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNF 221
A W H FL ++++D+ RR P HPDY+P+TL+VP +FL KQ+P M QWW +KS+
Sbjct: 270 AASWEHLKLPFLKKENLMDSARRKPSHPDYDPRTLFVPGDFLAKQSPGMRQWWELKSKYA 329
Query: 222 DCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
D +LFFKVGKFYE++HMDA +G + L YMK S
Sbjct: 330 DAILFFKVGKFYEMYHMDAAVGVEHLGLVYMKGS 363
>gi|194872672|ref|XP_001973060.1| GG13556 [Drosophila erecta]
gi|190654843|gb|EDV52086.1| GG13556 [Drosophila erecta]
Length = 1190
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 63/89 (70%)
Query: 165 WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCV 224
W H +FL PD I D R P HPDY+ TL+VP +FL +P + QWW +KS N+DCV
Sbjct: 220 WPHQKLEFLQPDKIKDKQGRRPDHPDYDKSTLHVPEKFLNGLSPGVRQWWVLKSDNYDCV 279
Query: 225 LFFKVGKFYELFHMDAVIGADELACSYMK 253
LFFKVGKFYEL+HMDA +G +EL +YM+
Sbjct: 280 LFFKVGKFYELYHMDADVGVNELGFTYMR 308
Score = 99.4 bits (246), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 75/131 (57%), Gaps = 6/131 (4%)
Query: 265 TQLCNYESQTP--SGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIK 322
T L +Q P G FPD+S+ L+YF AFDH A+ G I P+AG+D EYD MD I
Sbjct: 721 TALLRRITQLPESGGSFPDLSKELQYFATAFDHDAAAKTGVIAPQAGMDAEYDAAMDSIG 780
Query: 323 SIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKA-KSNHQRVATK-KKN 380
IEK +++YL Q HFGC + Y + K K+Y L+VP +ASKA KS TK KK
Sbjct: 781 EIEKRLKSYLEQQERHFGCRITYFGSDK--KRYQLDVPESHASKANKSYSLEGQTKGKKP 838
Query: 381 VENYVTPECRG 391
Y T E R
Sbjct: 839 SRRYTTAETRA 849
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI---EDKR 446
RGT T DG IA + + C T+F+THYH++ + + +M+ + ED
Sbjct: 1041 RGTATYDGTAIAASVVNFLANLKCRTLFSTHYHNLIDFFHNDKRITLGHMACMVENEDNA 1100
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
+ +T+ FLYK G CPKS+GFN A+LAG+P+ ++K ++ ++EA
Sbjct: 1101 DPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPQGIIKRAYELSKKVEA 1149
>gi|195126507|ref|XP_002007712.1| GI12236 [Drosophila mojavensis]
gi|193919321|gb|EDW18188.1| GI12236 [Drosophila mojavensis]
Length = 1189
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 75/205 (36%), Positives = 104/205 (50%), Gaps = 28/205 (13%)
Query: 69 DNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRG---LSS 125
D+GS+ Y P E E +SGEE+ D + +E E TP K K L++
Sbjct: 108 DDGSD--YQPDAKESTFSEESASGEED------DISEPGTEDEPTPKKQRKKSAKNFLNN 159
Query: 126 KSGQ--PTKKPKLTAPSTPSTPSF---------------PVSDTSETTPSTSGAQDWSHN 168
+ + +KK K+ P+ + +F + TT + W H
Sbjct: 160 NNIEEPASKKAKIETPALVAGGTFMEKLQQLQSNAKKDAAYDEIVTTTSNLDEPTVWPHQ 219
Query: 169 HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFK 228
FL PD I D R P HP+Y+ TL+VP +FL +P M QWW +K+ NFDCVLFFK
Sbjct: 220 KLDFLQPDKIKDKAGRRPDHPEYDKSTLHVPEKFLNTLSPAMRQWWVLKADNFDCVLFFK 279
Query: 229 VGKFYELFHMDAVIGADELACSYMK 253
VGKFYEL+H DA +G +EL +YM+
Sbjct: 280 VGKFYELYHGDADVGVNELGFTYMR 304
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 56/134 (41%), Positives = 80/134 (59%), Gaps = 6/134 (4%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
ESTLL +L + G +PD+S+ LK+FENAFDH+ A+ AG + P+ G+D +YDEV
Sbjct: 719 ESTLLRRLTQLSAN--GGNYPDLSKQLKFFENAFDHEAAAKAGVVAPQPGMDADYDEVQQ 776
Query: 320 EIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNH--QRVATK 377
I +E+ +Q YL+ Q HFGC V Y + K K+Y LEVP +A KA ++ +
Sbjct: 777 RIAEVEERLQAYLKEQERHFGCRVTYFGSDK--KRYQLEVPETHAHKANKSYALEGQVKG 834
Query: 378 KKNVENYVTPECRG 391
KK Y+T E +
Sbjct: 835 KKPARRYITTETKA 848
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 62/109 (56%), Gaps = 3/109 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI---EDKR 446
RGT T DG IA + + C T+F+THYH++ + + +M+ + ED
Sbjct: 1040 RGTATYDGTAIAASVVNFLANLKCRTLFSTHYHNLIDFFHMDKRITLGHMACMVENEDNA 1099
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
+ +T+ FLYK G CPKS+GFN A+LAG+P ++K ++ ++EA
Sbjct: 1100 DPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPHGIIKRAYELSKKVEA 1148
>gi|313227995|emb|CBY23144.1| unnamed protein product [Oikopleura dioica]
Length = 1136
Score = 123 bits (309), Expect = 2e-25, Method: Compositional matrix adjust.
Identities = 73/182 (40%), Positives = 101/182 (55%), Gaps = 14/182 (7%)
Query: 75 EYVPPKAEVESESEHSSGEEELEESV---EDPTPSSSEAEVTPMKNGNKRGLSSKSGQPT 131
++ PP A ES EE+++ S+ ED T S E E +P+K+ K+ S+ P+
Sbjct: 132 DFKPPGAAEES------SEEDMDTSIAGSEDDTIS--EPEESPVKS--KKKTVSRPKTPS 181
Query: 132 KKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDY 191
K ST + S +D E S W+H ++L P +I D R DY
Sbjct: 182 AARKRNLNSTMTDMSIFAADDDEDANGESKVV-WTHEELEWLKPKNIKDNKGRRADDVDY 240
Query: 192 NPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSY 251
+P TL+VP F+K TP MG WW IKS+NFD V+F+KVGKFYEL+HMDAVIG + ++
Sbjct: 241 DPTTLHVPDAFIKSLTPGMGNWWKIKSRNFDVVIFYKVGKFYELYHMDAVIGVENCGVTF 300
Query: 252 MK 253
MK
Sbjct: 301 MK 302
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/264 (23%), Positives = 103/264 (39%), Gaps = 41/264 (15%)
Query: 264 LTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDE------- 316
L NY CFP++ + + A N IP D + +E
Sbjct: 866 LISFANYGHTIEERCFPEVVDEGEVLSFTVGKHPTVDAANFIPN---DVDLEEGGKCILL 922
Query: 317 ---VMDEIKSIEKEIQTYLRTQCAHFGCTV------------IYSEAQKKQKKYVLEVPS 361
M +I ++I L T AH+GC V I++ + +L S
Sbjct: 923 TGPNMGGKSTILRQIG--LLTLLAHYGCAVPAESMQFSPVDRIFTRLGCSDR--LLAGES 978
Query: 362 KYASKAKSNHQRVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFLQIGCLTVFATHY 421
+ + + + K + RGT T+DG IA+ LE T+F+THY
Sbjct: 979 TFMVEMAETSSILKSSTKRSLLLLDELGRGTSTHDGSSIAQAVLETLSARNVRTIFSTHY 1038
Query: 422 HSVARRLREEPNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPED 481
H++ F +++ D+ G++ + FLY L G +S GF+ A AG+P++
Sbjct: 1039 HTL-----------FLHLNRQRDEET-GLEKVTFLYTLCDGHASRSHGFHAARSAGLPDE 1086
Query: 482 VVKFGTTVAFQMEARHNLRQLFIH 505
V+ A ++ HN Q H
Sbjct: 1087 VILAAQRAAKDLQKLHNGLQYINH 1110
>gi|194751549|ref|XP_001958088.1| GF10737 [Drosophila ananassae]
gi|190625370|gb|EDV40894.1| GF10737 [Drosophila ananassae]
Length = 1187
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 50/89 (56%), Positives = 63/89 (70%)
Query: 165 WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCV 224
W H +FL PD I D R P HPDY+ TL+VP +FL +P + QWW +KS N+DCV
Sbjct: 217 WPHQKLEFLQPDKIKDKAGRRPDHPDYDSSTLHVPDKFLNSLSPGVRQWWVLKSDNYDCV 276
Query: 225 LFFKVGKFYELFHMDAVIGADELACSYMK 253
LFFKVGKFYEL+HMDA +G +EL +YM+
Sbjct: 277 LFFKVGKFYELYHMDADVGVNELGFTYMR 305
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 60/131 (45%), Positives = 73/131 (55%), Gaps = 6/131 (4%)
Query: 265 TQLCNYESQTP--SGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIK 322
T L +Q P G FPD+S+ LKYF AFDH A+ G I P+ G+D EYD MD I
Sbjct: 718 TDLLKRITQLPESGGSFPDLSKELKYFATAFDHDAAAKTGVIAPQPGMDAEYDAAMDGIA 777
Query: 323 SIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKA-KSNHQRVATK-KKN 380
IEK ++TYL Q HFGC + Y + K K+Y L+VP +A KA KS TK KK
Sbjct: 778 EIEKRLKTYLEEQERHFGCRIAYFGSDK--KRYQLDVPETHAHKANKSYSLEGQTKGKKP 835
Query: 381 VENYVTPECRG 391
Y T E R
Sbjct: 836 CRRYTTAETRA 846
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 63/109 (57%), Gaps = 3/109 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI---EDKR 446
RGT T DG IA + + C T+F+THYH++ + + +M+ + ED
Sbjct: 1038 RGTATYDGTAIAASVVNFLANLKCRTLFSTHYHNLIDFFHNDKRITLGHMACMVENEDNE 1097
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
+ +T+ FLYK G CPKS+GFN A+LAG+P+ ++K ++ ++EA
Sbjct: 1098 DPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPQGIIKRAYELSKKVEA 1146
>gi|198435135|ref|XP_002126574.1| PREDICTED: similar to MGC85188 protein [Ciona intestinalis]
Length = 1307
Score = 123 bits (308), Expect = 3e-25, Method: Compositional matrix adjust.
Identities = 91/289 (31%), Positives = 131/289 (45%), Gaps = 58/289 (20%)
Query: 17 SSTPA-SSKGKKTSKSPAKSEDDSPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDE 75
S+TP S G S P + + K + +R+K + S+ D+ + D+ ++DE
Sbjct: 124 STTPMFRSGGMFHSNDPGVIKAVAIADKALKDTREERLKCVLDIPSDEDEQMDDHEADDE 183
Query: 76 YVPPKAEVESESEHSSGEEE----LEES--------------------------VEDPTP 105
A ++ H S +++ +EES V++ T
Sbjct: 184 NTEKDAGGSDDARHKSRDKKRRRIMEESDFSDEDGDFKPPPDVEGDEEDDESSGVDESTL 243
Query: 106 SSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGA--- 162
S E E P++ G KR +S P K P + P TP TP P + + TP++
Sbjct: 244 SDQEEE-EPVEIGKKR---KRSPLPVKTP--STPLTPRTPMTPRNPMTPRTPASVSKETK 297
Query: 163 ------------------QDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLK 204
Q + H FLHP I D R P P Y+ +L +P +F+
Sbjct: 298 SKLSLFQADPDSSVMEEKQKYLHETLDFLHPSKIKDTQGRKPDDPLYDKSSLKIPNDFMT 357
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
K TP M QWW +KS NF+ VLFFKVGKFYEL+HMDAV+G EL +YMK
Sbjct: 358 KLTPAMHQWWKLKSTNFNVVLFFKVGKFYELYHMDAVVGVKELGLTYMK 406
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 52/124 (41%), Positives = 68/124 (54%), Gaps = 5/124 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA L+ +GC T+F+THYH++ L +V +MS +E
Sbjct: 1166 RGTATYDGTSIAYAVLDNIANHVGCRTIFSTHYHTLVEDLAHSKHVKLGHMSCMVEHDDV 1225
Query: 448 DG-ID--TIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFI 504
DG +D T+ FLYKL G CPKS+GF+ A LA IPE VV A +ME + LF
Sbjct: 1226 DGDVDKETLTFLYKLADGACPKSYGFHAALLADIPESVVTIARRKAKEMEENNKNLSLFR 1285
Query: 505 HKFA 508
F+
Sbjct: 1286 SLFS 1289
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/137 (32%), Positives = 74/137 (54%), Gaps = 1/137 (0%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+ S + +S+LL + S G FPD+ LK ++NAF+ K+A G I P AG +
Sbjct: 825 MQGSVASFKSSLLKSVLGLTSGISEGKFPDLGSTLKQWKNAFNQKKAKETGKITPNAGTN 884
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNH 371
EYD M++I I +++ YL Q C+ I + K+Y LE+P+ AS+ N
Sbjct: 885 PEYDGAMEDINRINDDLERYLNEQKKKLSCSRIIYKGT-GNKRYQLELPADVASRKLPND 943
Query: 372 QRVATKKKNVENYVTPE 388
++ ++K +++ TP+
Sbjct: 944 YVISGQRKGFKSFRTPK 960
>gi|363731315|ref|XP_419359.3| PREDICTED: DNA mismatch repair protein Msh6 [Gallus gallus]
Length = 1345
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/197 (38%), Positives = 102/197 (51%), Gaps = 17/197 (8%)
Query: 75 EYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRG-------LSSKS 127
E+ P E SE E SSG +E E + + S E + + KRG SS
Sbjct: 247 EFKPDVKEASSE-EASSGVDENEATDVETDEESIEESPIKVPSKRKRGNVSKPSKRSSLE 305
Query: 128 GQPTKKPKLTAPSTP---------STPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHI 178
+ ++ PK AP + + P S + + T+G W H ++L
Sbjct: 306 NEHSEAPKRAAPVSLEAKSKLTLFAAPENFESQANACSGGTNGFAAWEHEKLEWLQEGKK 365
Query: 179 LDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHM 238
DA RR HPDY+P TLYVP ++L K TP M +WW +KSQNFD V+ +KVGKFYEL+HM
Sbjct: 366 KDAHRRRQNHPDYDPCTLYVPEDYLNKCTPGMRRWWQLKSQNFDAVICYKVGKFYELYHM 425
Query: 239 DAVIGADELACSYMKES 255
DAV G +EL +MK S
Sbjct: 426 DAVTGVNELGLIFMKGS 442
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/138 (36%), Positives = 73/138 (52%), Gaps = 5/138 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA + + + I C T+F+THYHS+ V +M+ +E++
Sbjct: 1202 RGTATFDGTAIASAVVRELAENIKCRTLFSTHYHSLVEDYSGSAAVRLGHMACMVENESE 1261
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA IPE++++ G A + E + L I +
Sbjct: 1262 DPSQETITFLYKFIEGACPKSYGFNAARLADIPEEIIQKGHRKAKEFEKK--TMSLRIFR 1319
Query: 507 FASLVKSGEKVDVEELQK 524
F V G D + K
Sbjct: 1320 FLCRVVDGVTHDANAVGK 1337
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E +S +L QL +++ P G FPD+S LK ++ AFDH +A G I PKAG D
Sbjct: 860 MEEVASDFKSQVLKQLVTRKAKHPDGRFPDLSAELKRWDTAFDHNQARKTGVITPKAGFD 919
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +IK++E++ +TYL Q G +V+Y K +Y +E+P S+
Sbjct: 920 PDYDKALQDIKTVEEDFRTYLDKQRKLLGLKSVLYWGTGK--NRYQMEIPETATSRNLPE 977
Query: 371 HQRVATKKKNVENYVTPE 388
+ + +K + Y T E
Sbjct: 978 EYELKSTRKGYKRYWTKE 995
>gi|327262723|ref|XP_003216173.1| PREDICTED: DNA mismatch repair protein Msh6-like [Anolis
carolinensis]
Length = 1361
Score = 122 bits (307), Expect = 4e-25, Method: Compositional matrix adjust.
Identities = 76/220 (34%), Positives = 113/220 (51%), Gaps = 18/220 (8%)
Query: 48 KSAKRVKSAIQSDSEPDDM--LQDNGSEDEYVPPKAEVE-SESEHSSGEEELEESVEDPT 104
K+ KR + + SD E DM D S DE P + E E S++E +++ P
Sbjct: 241 KAKKRKLNDLDSDHEGSDMEFKPDQASSDENSPGRGESEISDTEFDPEKKKKRHIKVSPK 300
Query: 105 P-----SSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPST 159
P E + P + L + P+++ L+ SF D + P+
Sbjct: 301 PFIKPTQEKEYRLPPKEIPKNDILET----PSREINLSCEIMYKLASFAAPDCYDYRPNI 356
Query: 160 SGAQD------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQW 213
+G + W H+ ++L DA+RR PDY+P T++VP ++LK TP M +W
Sbjct: 357 NGGGEDGSPSVWEHDKIEWLKDGKRKDANRRRQNDPDYDPSTIFVPEDYLKNCTPGMRKW 416
Query: 214 WTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
W +KSQ FDCVLF+KVGKFYEL+HMDAV+G +L ++MK
Sbjct: 417 WELKSQYFDCVLFYKVGKFYELYHMDAVVGVSKLGLAFMK 456
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 52/144 (36%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C +F+THYHS+ P+V +M+ +E++
Sbjct: 1221 RGTATFDGTAIANAVVKELSENIRCRAMFSTHYHSLVEDYTRCPSVQLGHMACMVENESE 1280
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME-ARHNLRQLFIH 505
D +TI FLYK + G CPKS+GFN A LA IPE+V++ G A + E H+L+
Sbjct: 1281 DPSQETITFLYKFIKGACPKSYGFNAARLADIPEEVIQKGHKKAKEFERITHSLKAF--- 1337
Query: 506 KFASLVKSGEKVDVEELQKALESV 529
+ + G + ++L+K+L V
Sbjct: 1338 RNLCRIADGAPLIKDDLKKSLLHV 1361
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/152 (32%), Positives = 78/152 (51%), Gaps = 15/152 (9%)
Query: 261 STLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDE 320
S +L Q +S+ P GCFPD++E LK ++ AFDH A G I PK G D +YD+ +++
Sbjct: 886 SKILRQTVTLKSKNPEGCFPDLTEELKKWDAAFDHTTARKTGVINPKPGFDSDYDKAVED 945
Query: 321 IKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEV---------PSKYASK-AKS 369
I +IE+ ++ YL Q G ++Y A K +Y +E+ P+ Y K ++
Sbjct: 946 ITNIEEYLRQYLEEQRKRLGIRAMMYWGAGK--NRYQIEIAETAVPRDLPNDYVLKSSRK 1003
Query: 370 NHQRVATK--KKNVENYVTPECRGTGTNDGCV 399
++R TK +K + V E R C+
Sbjct: 1004 GYKRYWTKDTEKMLNKIVNAEERRDAAQKACM 1035
>gi|326914905|ref|XP_003203763.1| PREDICTED: DNA mismatch repair protein Msh6-like [Meleagris
gallopavo]
Length = 1289
Score = 121 bits (304), Expect = 8e-25, Method: Compositional matrix adjust.
Identities = 71/179 (39%), Positives = 96/179 (53%), Gaps = 11/179 (6%)
Query: 86 ESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTP 145
E+E + E + E E P S+ + + +KR SS + ++ PK AP +
Sbjct: 210 ENEATDAETDAESVEESPIKVPSKRKRGNVSKPSKR--SSLENEHSEAPKRAAPVSLEAK 267
Query: 146 S----FPVSDTSET-----TPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTL 196
S F D E+ + T G W H ++L DA RR PDY+P TL
Sbjct: 268 SKLTLFAAPDNFESQANACSGGTGGLAAWEHEKLEWLQEGKKKDAHRRRQNDPDYDPCTL 327
Query: 197 YVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
YVP ++L K TP M +WW +KSQNFD V+ +KVGKFYEL+HMDAVIG +EL +MK S
Sbjct: 328 YVPEDYLNKCTPGMRRWWQLKSQNFDAVICYKVGKFYELYHMDAVIGVNELGLIFMKGS 386
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 52/138 (37%), Positives = 73/138 (52%), Gaps = 5/138 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA + + + I C T+F+THYHS+ V +M+ +E++
Sbjct: 1146 RGTATFDGTAIASAVVRELAENIKCRTLFSTHYHSLVEDYSGSAAVRLGHMACMVENESE 1205
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA IPE+V++ G A + E + L I +
Sbjct: 1206 DPSQETITFLYKFIEGACPKSYGFNAARLADIPEEVIQKGHRKAREFEEK--TMSLRIFR 1263
Query: 507 FASLVKSGEKVDVEELQK 524
F V G D + K
Sbjct: 1264 FLCRVVDGATRDANAVGK 1281
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 46/138 (33%), Positives = 75/138 (54%), Gaps = 3/138 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E +S +L QL +++ P G FPD+S LK ++ AFDH +A G I PKAG D
Sbjct: 804 MEEVASDFKSQVLKQLVTRKAKHPDGRFPDLSAELKRWDTAFDHNQARKTGVITPKAGFD 863
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +IK++E++ + YL Q G +V+Y K +Y +E+P S+
Sbjct: 864 SDYDKALQDIKTVEEDFRAYLDKQRKLLGVKSVLYWGTGK--NRYQMEIPETAISRNLPE 921
Query: 371 HQRVATKKKNVENYVTPE 388
+ + +K + Y T E
Sbjct: 922 EYELKSTRKGYKRYWTKE 939
>gi|195378902|ref|XP_002048220.1| GJ11467 [Drosophila virilis]
gi|194155378|gb|EDW70562.1| GJ11467 [Drosophila virilis]
Length = 1192
Score = 120 bits (301), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 65/171 (38%), Positives = 87/171 (50%), Gaps = 19/171 (11%)
Query: 98 ESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSF---------- 147
E+ +DPTP + + N ++ +KK KL AP + +F
Sbjct: 141 ETDDDPTPKKQRTKASK----NHINNNNNDEPASKKAKLDAPVLAAGGTFMEKLQQLQSN 196
Query: 148 -----PVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEF 202
+ TT + W H FL PD I D R P HPDY+ TL+VP +F
Sbjct: 197 AKKDAAYDEIVTTTSNMDEPVVWPHQKLDFLQPDKIKDKAGRRPDHPDYDKSTLHVPEKF 256
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
L +P + QWW +KS NFDCVLFFKVGKFYEL+H DA +G +EL +YM+
Sbjct: 257 LNGLSPGVRQWWILKSDNFDCVLFFKVGKFYELYHGDADVGVNELGFTYMR 307
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 53/131 (40%), Positives = 75/131 (57%), Gaps = 6/131 (4%)
Query: 265 TQLCNYESQTP--SGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIK 322
T+L +Q P G +PD+S+ LK+FENAFDH+ A G I P+ GVD +YDEV I
Sbjct: 722 TKLMQRLTQLPPNGGSYPDLSKQLKFFENAFDHEAADKTGVIAPQPGVDADYDEVQQRIA 781
Query: 323 SIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNH--QRVATKKKN 380
+++ ++ YL Q HFGC V+Y + K K+Y LEVP +A KA ++ + KK
Sbjct: 782 DVQERLKIYLTEQERHFGCRVVYFGSDK--KRYQLEVPESHAHKANKSYALEGQVKGKKA 839
Query: 381 VENYVTPECRG 391
Y T E +
Sbjct: 840 ARRYTTAETKA 850
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 76/151 (50%), Gaps = 8/151 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI---EDKR 446
RGT T DG IA + + C T+F+THYH++ + + +M+ + ED
Sbjct: 1043 RGTATYDGTAIAASVVNFLANLKCRTLFSTHYHNLIDFFHTDKRITLGHMACMVENEDNT 1102
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
+ +T+ FLYK G CPKS+GFN A+LAG+P ++K ++ ++EA R K
Sbjct: 1103 DPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPHGIIKRAYELSKKVEAIALQR-----K 1157
Query: 507 FASLVKSGEKVDVEELQKALESVKSFESQTK 537
+ + + DV + L ++K Q K
Sbjct: 1158 ITAKIVAAAAGDVNKKTDKLNNLKDLLQQLK 1188
>gi|195441342|ref|XP_002068471.1| GK20488 [Drosophila willistoni]
gi|194164556|gb|EDW79457.1| GK20488 [Drosophila willistoni]
Length = 1182
Score = 120 bits (300), Expect = 2e-24, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 63/89 (70%)
Query: 165 WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCV 224
W H+ +FL PD I D R P HPDY+ TL+VP +FL +P + QWW +KS N+DCV
Sbjct: 210 WPHHKLEFLQPDKIKDKAGRRPDHPDYDKSTLHVPEKFLNSLSPGVRQWWVLKSDNYDCV 269
Query: 225 LFFKVGKFYELFHMDAVIGADELACSYMK 253
LFFKVGKFYEL+H DA +G +EL +YM+
Sbjct: 270 LFFKVGKFYELYHWDADVGVNELGFTYMR 298
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 54/131 (41%), Positives = 75/131 (57%), Gaps = 2/131 (1%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
ES+LL ++ S G FPD+S L+YF AFDH+ A+ +G I P+ G+D EYD VMD
Sbjct: 709 ESSLLKRITQLPSHAEGGLFPDLSSQLRYFAEAFDHEAAAKSGVIAPQPGMDAEYDAVMD 768
Query: 320 EIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKK 379
I +IE +++YL Q HFGC + Y A K K+Y L+VP +A KA ++ K
Sbjct: 769 RIHAIEDRLKSYLVEQERHFGCRLAYFGADK--KRYQLDVPESHAHKANKSYTLEGQLKG 826
Query: 380 NVENYVTPECR 390
Y T E +
Sbjct: 827 KKRRYTTAETK 837
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 4/110 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG IA + Q+ C T+F+THYH++ + + + +M+ + + +D
Sbjct: 1030 RGTATYDGTAIAASVVNFLAQLKCRTLFSTHYHNLIDFFQNDKRITLGHMACMVENDSDT 1089
Query: 450 ID----TIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
D T+ FLYK G CPKS+GFN A+LAG+P+ ++K ++ ++EA
Sbjct: 1090 QDPTQETVTFLYKYTAGACPKSYGFNAAKLAGMPQGIIKRAYALSKKVEA 1139
>gi|194388224|dbj|BAG65496.1| unnamed protein product [Homo sapiens]
Length = 1058
Score = 119 bits (299), Expect = 3e-24, Method: Compositional matrix adjust.
Identities = 61/147 (41%), Positives = 83/147 (56%), Gaps = 10/147 (6%)
Query: 117 NGNKRGLSSKSGQPTKKPKLTAPSTPS---TPSFPVSDTSETTPSTSGAQD-------WS 166
NG+ + SS+ P+ + T+ S+ + +F SE+ SG D W
Sbjct: 5 NGSLKRKSSRKETPSATKQATSISSETKNTLRAFSAPQNSESQAHVSGGGDDSSRPTVWY 64
Query: 167 HNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLF 226
H ++L + D RR P HPD++ TLYVP +FL TP M +WW IKSQNFD V+
Sbjct: 65 HETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNSCTPGMRKWWQIKSQNFDLVIC 124
Query: 227 FKVGKFYELFHMDAVIGADELACSYMK 253
+KVGKFYEL+HMDA+IG EL +MK
Sbjct: 125 YKVGKFYELYHMDALIGVSELGLVFMK 151
Score = 88.6 bits (218), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 915 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 974
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 975 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 1032
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L +K
Sbjct: 1033 EVCLASERSTVDAEAVHKLLTLIKEL 1058
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E +S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D
Sbjct: 573 MEEVADGFKSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFD 632
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +I+ E+ + YL Q GC T++Y + +Y LE+P + ++
Sbjct: 633 SDYDQALADIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPE 690
Query: 371 HQRVATKKKNVENYVT 386
+ + KK + Y T
Sbjct: 691 EYELKSTKKGCKRYWT 706
>gi|348507016|ref|XP_003441053.1| PREDICTED: DNA mismatch repair protein Msh6 [Oreochromis niloticus]
Length = 1381
Score = 119 bits (298), Expect = 4e-24, Method: Compositional matrix adjust.
Identities = 84/222 (37%), Positives = 114/222 (51%), Gaps = 30/222 (13%)
Query: 50 AKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSE 109
AKR + SDS +GS++++ P A SE E G E EE E S E
Sbjct: 257 AKRRRIIAASDS--------DGSDEDFKPEHAASSSEDEEDGGGESCEEKEESTEKSDVE 308
Query: 110 AEVTPMKNGNKRGLSSKSGQPTKKPKLTAPS-TP-STPSFPVSDT--------------- 152
+ + P K S+K TK TAPS TP S P+ +DT
Sbjct: 309 SPIKPAKRKRPAEKSAK----TKAKTSTAPSVTPKSIPAAVATDTKSRLSAFSAPESFES 364
Query: 153 -SETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMG 211
+ + ST+GA W H ++L D RR DY+P TLYVP +F+ + TP M
Sbjct: 365 QANGSGSTAGATVWDHEKLEWLQDGKRKDGKRRRQTDDDYDPSTLYVPNDFMNEITPGMR 424
Query: 212 QWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
+WW +KS+ FD V+F+KVGKFYEL+HMDAVIG +E+ ++MK
Sbjct: 425 RWWQLKSEMFDTVIFYKVGKFYELYHMDAVIGVNEMGLTFMK 466
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ P V +M+ +E++
Sbjct: 1238 RGTATYDGTAIASAVVKELAEKICCRTLFSTHYHSLVEDYANNPAVRLGHMACMVENECE 1297
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E +LF
Sbjct: 1298 DPSQETITFLYKFITGACPKSYGFNAARLANLPEEVIQSGHRKAREFEKSTVSLRLF 1354
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/128 (38%), Positives = 72/128 (56%), Gaps = 2/128 (1%)
Query: 261 STLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDE 320
STLL Q+ + S+ +G FPD+S LK ++ AFDH++A + G I PKAG D EYD+ +
Sbjct: 900 STLLCQVISLNSEK-NGLFPDLSGELKRWDTAFDHQKARTTGVITPKAGFDPEYDQALTG 958
Query: 321 IKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKN 380
IK+ E+E+Q YL Q GC + K +Y +EVP + + + + KK
Sbjct: 959 IKNCERELQDYLDRQKKRLGCKSMSFWGTGKN-RYQMEVPDSVSERNVPEEYELKSTKKG 1017
Query: 381 VENYVTPE 388
+ YVT E
Sbjct: 1018 WKRYVTKE 1025
>gi|325188354|emb|CCA22891.1| PREDICTED: similar to G/T mismatch binding protein p [Albugo
laibachii Nc14]
Length = 1191
Score = 118 bits (296), Expect = 7e-24, Method: Compositional matrix adjust.
Identities = 82/219 (37%), Positives = 113/219 (51%), Gaps = 35/219 (15%)
Query: 46 RRKSAKRVKSAIQSDSEPDD-MLQDNGSED---EYVPPKAEV---ESESEHSSGEEELEE 98
+ K+ KR + ++ DS +D ++ NG +D +Y K V E SE EEEL++
Sbjct: 93 KNKNRKRSVAILEDDSSSEDELMASNGDDDFDLDYTEDKHVVSSREDSSEADLDEEELKD 152
Query: 99 SV---EDPTPSSSEAEVTPMKNG-NKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSE 154
+ +DP+ S +K G +K G S+ P P P++ F
Sbjct: 153 TFVVQKDPSQKHS-----ILKQGVDKSGPVSQVATPK-----AIPQQPASGVF------- 195
Query: 155 TTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWW 214
G+ H+ +L + D D P +Y+P+TLYVPP FLKK+TP M QWW
Sbjct: 196 ------GSGCHIHDSLVWLKTERC-DIDGNRPDSSNYDPRTLYVPPNFLKKETPAMIQWW 248
Query: 215 TIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
+KS+N D VLFFKVGKFYELFHMDA +G EL YMK
Sbjct: 249 EVKSRNMDTVLFFKVGKFYELFHMDADVGFKELNLIYMK 287
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 65/106 (61%), Gaps = 3/106 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA +E L+ +GC ++FATHYHS+ + + VA +M+ + D + +
Sbjct: 1037 RGTSTFDGTAIASSVVEYLLRRVGCRSMFATHYHSLVEEYQNDSKVALSHMACMIDPKEE 1096
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ FLYKL PG+CP+S+G NVA LA +PE V++ + Q E
Sbjct: 1097 --HKVTFLYKLSPGMCPRSYGTNVAILAQLPEQVIQCAIAKSKQFE 1140
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 75/136 (55%), Gaps = 5/136 (3%)
Query: 260 ESTLLTQLC-----NYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEY 314
ES+LL + + E++ +G FPD+ + L++F+ +FD + A +G IIP+ GVD EY
Sbjct: 705 ESSLLRNIVQKSDSDGETERSAGQFPDLRKRLEFFKVSFDRESAQKSGVIIPETGVDPEY 764
Query: 315 DEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRV 374
D +I+ +EK ++ YL Q C I +KK +Y LE+P + + + +
Sbjct: 765 DAACIDIQRVEKALEEYLEEQKKILRCQQISYWGKKKDDRYQLEIPEEAITSKQPKEYEL 824
Query: 375 ATKKKNVENYVTPECR 390
+++K + + TP+ R
Sbjct: 825 KSRRKGFKRFHTPKIR 840
>gi|328493202|gb|AEB20401.1| msh6 [Schmidtea mediterranea]
Length = 1174
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 89/269 (33%), Positives = 134/269 (49%), Gaps = 37/269 (13%)
Query: 8 SPEKKGDSESSTPASSKGK--KTSKSPAKSEDDSPVT--------KRPRRKSAKRVKSAI 57
S K+ D + A+SK K KT K K D P T + RKS KR+K+
Sbjct: 15 SKNKQTDILNIETANSKSKVNKTDKIKFKDNDSMPSTDNKDSDDFRNNSRKSFKRLKALS 74
Query: 58 QSD-SEPDDMLQDNGSEDEYVPPKAE----VESESEHSSGEEELEESVEDPTPSSSEAEV 112
+ D S+ ++ L + ++ V P E ++E+E SG + ++V TP +
Sbjct: 75 EDDESDKENSLIFSTNKKIKVKPNYESPPMTKTENEFLSG---IRKNVNASTPHKKK--- 128
Query: 113 TPMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPS--TSGAQDWSHNHY 170
P K+ KS + K L++ S + S ++ S+ + + + H Y
Sbjct: 129 -PTKD-------EKSINDSTKALLSSFSINANDSNIETNISQVIEDDFKNDIESYEHFSY 180
Query: 171 QFLHPDHILDADRRSPKHPDYNPKTLYVPPEFL-----KKQTPCMGQWWTIKSQ-NFDCV 224
+FL ++I DA RR P HPDY+P TL++P F+ K TP + QWW IK+ N + +
Sbjct: 181 EFLKKENIRDAQRRKPDHPDYDPTTLFIPESFMMSLIQSKLTPGLKQWWKIKANGNMETI 240
Query: 225 LFFKVGKFYELFHMDAVIGADELACSYMK 253
FFKVGKFYEL+HMDAV EL +YM+
Sbjct: 241 FFFKVGKFYELYHMDAVTAVSELGLTYMR 269
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 74/132 (56%), Gaps = 1/132 (0%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S LL ++ + + G FPD+SE++ +F+ AFD + A G IIP++G+D +YDE +
Sbjct: 709 QSKLLRKIMLHSKDSKIGEFPDISEIISFFKTAFDQENAKKNGKIIPESGIDADYDESVA 768
Query: 320 EIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKK 379
IK IE+++ YL Q V+ + + ++ LE+P SK S + ++++K
Sbjct: 769 LIKEIERDLAEYLEKQKKIINSNVLINFFGTGKNRFQLEIPESKCSKVPSTYI-ASSQRK 827
Query: 380 NVENYVTPECRG 391
+ Y+T E G
Sbjct: 828 GFKRYLTVEIEG 839
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 56/113 (49%), Gaps = 17/113 (15%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGC--LTVFATHYHSVARRLREEPNVAFEYMS-YIEDK- 445
RGT T DGC +A L++ C T+F+TH+H + N+ +M+ IED
Sbjct: 1046 RGTATYDGCALAFSILKRIAD-SCSPRTIFSTHFHKLLEEKEIGDNLQISHMACMIEDDN 1104
Query: 446 ------------RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
N + I FLYKL G CPKS+GFN A LA IPE ++ G
Sbjct: 1105 DDDVGNNECHLDNNLKLQNITFLYKLTHGGCPKSYGFNAARLANIPEQIILNG 1157
>gi|449275264|gb|EMC84167.1| DNA mismatch repair protein Msh6, partial [Columba livia]
Length = 1247
Score = 117 bits (294), Expect = 1e-23, Method: Compositional matrix adjust.
Identities = 72/178 (40%), Positives = 97/178 (54%), Gaps = 11/178 (6%)
Query: 84 ESESEHSSGEEE--LEESVEDPTPSSSEAEVTPMKNG---NKRGLSSKSGQPTK---KPK 135
E+ES ++ +EE E V+ P+ P K N+R + K P K K
Sbjct: 194 ENESTNTETDEESVAESPVKVPSKRKRREINKPAKRSSLENERSETLKRAAPVSLEGKSK 253
Query: 136 LTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKT 195
LT+ + P SF S + + +SG W H ++L DA RR P Y+P T
Sbjct: 254 LTSFAAPE--SFE-SQANACSGGSSGFAVWEHEKLEWLQEGKKKDAHRRRQNDPAYDPGT 310
Query: 196 LYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
LYVP ++L K TP M +WW +KSQNFD V+ +KVGKFYEL+HMDAVIG +EL +MK
Sbjct: 311 LYVPEDYLNKCTPGMRRWWQLKSQNFDAVICYKVGKFYELYHMDAVIGVNELGLIFMK 368
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/138 (34%), Positives = 76/138 (55%), Gaps = 3/138 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E +S +L QL +++ P G FPD+S LK ++ AFDH +A G I PKAG D
Sbjct: 788 MEEVASDFKSEVLKQLVTRKAKNPDGRFPDLSAELKRWDTAFDHNQARKTGVITPKAGFD 847
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +IK++E+++ YL Q G +V+Y A K +Y +E+P S+
Sbjct: 848 PDYDKALQDIKAVEEDLHKYLDKQRKLLGFKSVLYWGAGK--NRYQMEIPESVISRNLPE 905
Query: 371 HQRVATKKKNVENYVTPE 388
+ + +K + Y T E
Sbjct: 906 EYELKSSRKGYKRYWTKE 923
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 64/108 (59%), Gaps = 3/108 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ V +M+ +E++
Sbjct: 1130 RGTATFDGTAIASAVVKELAERIRCRTLFSTHYHSLVEDYSHNGAVRLGHMACMVENESE 1189
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
D +TI FLYK + G CPKS+GFN A LA IPE+V++ G A + E
Sbjct: 1190 DPSQETITFLYKFIEGACPKSYGFNAARLADIPEEVIQKGHRKAKEFE 1237
>gi|312384757|gb|EFR29409.1| hypothetical protein AND_01583 [Anopheles darlingi]
Length = 1180
Score = 117 bits (293), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 49/89 (55%), Positives = 60/89 (67%)
Query: 165 WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCV 224
W+H +FL P+ I D P Y+ +TL+VP FL TP M QWW IKSQ++DCV
Sbjct: 200 WAHQKLEFLKPNKIKDIQGNRPGSEKYDGRTLFVPESFLNTLTPAMRQWWEIKSQHYDCV 259
Query: 225 LFFKVGKFYELFHMDAVIGADELACSYMK 253
LFFKVGKFYEL+HMDA +G EL S+MK
Sbjct: 260 LFFKVGKFYELYHMDAEVGVSELGFSFMK 288
Score = 85.9 bits (211), Expect = 5e-14, Method: Compositional matrix adjust.
Identities = 55/138 (39%), Positives = 78/138 (56%), Gaps = 12/138 (8%)
Query: 259 GESTLLTQLCNYESQTPSGCFP--DMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDE 316
+S LL ++ +S + G FP M + L +F+ AFDH++A +G I P+ GVD EYD
Sbjct: 711 AKSELLVRIT--QSASVGGAFPIETMRKQLAFFDKAFDHEKALKSGVIAPERGVDSEYDT 768
Query: 317 VMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNH----Q 372
V EI++++ E++ YL Q FGCTV+Y K K+Y LEVP A KA S + Q
Sbjct: 769 VEREIETLKTELEEYLAEQSKFFGCTVVYFGNDK--KRYQLEVPEARAKKATSEYSLESQ 826
Query: 373 RVATKKKNVENYVTPECR 390
R K V+ + T E R
Sbjct: 827 RAG--KNGVKRFHTEETR 842
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRND 448
RGT T DG +A + C T+F+THYH++ +P +A +M+ +E++ D
Sbjct: 1040 RGTATYDGTAVAGAVVHFLADRQCRTLFSTHYHNLVDSFHADPRIALGHMACMVENEEGD 1099
Query: 449 G--IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
+T+ FLYK G CPKS+GFN A+LAG+P ++K ++ ++E R L++ + K
Sbjct: 1100 DPTQETVTFLYKYADGPCPKSYGFNAAKLAGMPMAIIKRAYELSKKVE-RDALKRKIMMK 1158
Query: 507 FASLVKSGEKVDVEELQKALESVK 530
LVK + ++ +L L+S +
Sbjct: 1159 ---LVKGAPEPEIRDLVAKLQSCR 1179
>gi|256078665|ref|XP_002575615.1| hypothetical protein [Schistosoma mansoni]
gi|360043417|emb|CCD78830.1| hypothetical protein Smp_042670.2 [Schistosoma mansoni]
Length = 1116
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 62/91 (68%)
Query: 165 WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCV 224
W+H FL P I D + R P HP+Y+ TLYVP EF KQTP M QWW +KS+ D +
Sbjct: 87 WTHLSLPFLEPSKIKDINGRRPDHPEYDSHTLYVPEEFKTKQTPGMRQWWELKSRYTDVI 146
Query: 225 LFFKVGKFYELFHMDAVIGADELACSYMKES 255
LFFKVGKFYE++HMDA+IG EL +MK S
Sbjct: 147 LFFKVGKFYEMYHMDAMIGVKELGLVFMKGS 177
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 66/112 (58%), Gaps = 3/112 (2%)
Query: 277 GCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQC 336
G FPD++E + YF+NAFD ++A G I P+ G+D EYDE + EIK I +++ +L
Sbjct: 630 GNFPDITEKINYFKNAFDAEKAKREGRITPEPGIDPEYDESLSEIKRIVEDMDRFLLKWS 689
Query: 337 AHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPE 388
FG + Y + +Y +E+P AS+ ++ Q +++++K V+ Y E
Sbjct: 690 KTFGTRLAYWGTGR--NRYQIEIPESLASRVPNSWQ-LSSQRKGVKRYTCSE 738
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 22/127 (17%)
Query: 390 RGTGTNDGCVIARVTLEK--------FLQIGCLTVFATHYHS----VARRLR----EEPN 433
RGT T+DG +A + F G T+F+THYHS VA + R E+ N
Sbjct: 957 RGTSTHDGSALAGAVVSYLAKPNGRFFNGSGPRTLFSTHYHSLVDQVANKDRSTSDEDIN 1016
Query: 434 ---VAFEYMSYI---EDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGT 487
+ +M+ + E + +G++ I FLYK +PG CPKS+GFN A LA +P+ V++ G
Sbjct: 1017 HLCIGLGHMACMVEAESESTNGLENITFLYKFIPGACPKSYGFNAARLAMLPDKVIRLGL 1076
Query: 488 TVAFQME 494
A + E
Sbjct: 1077 AKAKEFE 1083
>gi|256078667|ref|XP_002575616.1| hypothetical protein [Schistosoma mansoni]
gi|360043418|emb|CCD78831.1| hypothetical protein Smp_042670.1 [Schistosoma mansoni]
Length = 1074
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 51/91 (56%), Positives = 62/91 (68%)
Query: 165 WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCV 224
W+H FL P I D + R P HP+Y+ TLYVP EF KQTP M QWW +KS+ D +
Sbjct: 87 WTHLSLPFLEPSKIKDINGRRPDHPEYDSHTLYVPEEFKTKQTPGMRQWWELKSRYTDVI 146
Query: 225 LFFKVGKFYELFHMDAVIGADELACSYMKES 255
LFFKVGKFYE++HMDA+IG EL +MK S
Sbjct: 147 LFFKVGKFYEMYHMDAMIGVKELGLVFMKGS 177
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 39/112 (34%), Positives = 66/112 (58%), Gaps = 3/112 (2%)
Query: 277 GCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQC 336
G FPD++E + YF+NAFD ++A G I P+ G+D EYDE + EIK I +++ +L
Sbjct: 630 GNFPDITEKINYFKNAFDAEKAKREGRITPEPGIDPEYDESLSEIKRIVEDMDRFLLKWS 689
Query: 337 AHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPE 388
FG + Y + +Y +E+P AS+ ++ Q +++++K V+ Y E
Sbjct: 690 KTFGTRLAYWGTGR--NRYQIEIPESLASRVPNSWQ-LSSQRKGVKRYTCSE 738
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 62/115 (53%), Gaps = 22/115 (19%)
Query: 390 RGTGTNDGCVIARVTLEK--------FLQIGCLTVFATHYHS----VARRLR----EEPN 433
RGT T+DG +A + F G T+F+THYHS VA + R E+ N
Sbjct: 957 RGTSTHDGSALAGAVVSYLAKPNGRFFNGSGPRTLFSTHYHSLVDQVANKDRSTSDEDIN 1016
Query: 434 ---VAFEYMSYI---EDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDV 482
+ +M+ + E + +G++ I FLYK +PG CPKS+GFN A LA +P+ V
Sbjct: 1017 HLCIGLGHMACMVEAESESTNGLENITFLYKFIPGACPKSYGFNAARLAMLPDKV 1071
>gi|432906031|ref|XP_004077496.1| PREDICTED: DNA mismatch repair protein Msh6-like [Oryzias latipes]
Length = 1381
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 67/171 (39%), Positives = 95/171 (55%), Gaps = 14/171 (8%)
Query: 97 EESVEDPTPSSSEAEVTPMKNGN--KRGLSSKSGQP---TKKPKLTAPSTPSTP-----S 146
EE E S E+ V P+K ++ SSK+ P T PK P+ + +
Sbjct: 296 EEEAESTQESEVESPVKPVKRKRPAEKSKSSKAKTPAAFTATPKRAPPAVAANTKSRLTA 355
Query: 147 FPVSDTSETT---PSTSGAQD-WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEF 202
F D+ E+ P+++GA W H ++L D RR DY+P +LYVP +F
Sbjct: 356 FSAPDSFESQANGPASAGAATVWDHEKLEWLQEGKRKDGKRRRQTDEDYDPTSLYVPEDF 415
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
L + TP M +WW +KS+ FD V+F+KVGKFYEL+HMDAVIG +EL ++MK
Sbjct: 416 LNRITPGMRRWWQLKSEMFDTVIFYKVGKFYELYHMDAVIGVNELGLTFMK 466
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 48/128 (37%), Positives = 69/128 (53%), Gaps = 2/128 (1%)
Query: 261 STLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDE 320
S LL QL + +++ G FPD+S LK ++ AFDH++A S G I PKAG D EYD+ +
Sbjct: 900 SKLLRQLVSLKTEE-GGLFPDLSAELKRWDTAFDHQKARSTGVITPKAGFDPEYDQALAG 958
Query: 321 IKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKN 380
I+S E+E+ YL Q GC + K ++ +EVP + V + KK
Sbjct: 959 IRSCERELNDYLERQKKRLGCKGMAFWGTGKN-RFQMEVPDSVPERNIPEEYEVKSTKKG 1017
Query: 381 VENYVTPE 388
+ YVT E
Sbjct: 1018 CKRYVTKE 1025
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + + C T+F+THYHS+ + V +M+ +E++
Sbjct: 1238 RGTATYDGTAIASAVVKELAEKVCCRTLFSTHYHSLVEDYAKNSAVRLGHMACMVENECE 1297
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E +LF
Sbjct: 1298 DPSQETITFLYKFISGACPKSYGFNAARLANLPEEVIQSGHKKAREFERSTVSLRLF 1354
>gi|195021403|ref|XP_001985388.1| GH17031 [Drosophila grimshawi]
gi|193898870|gb|EDV97736.1| GH17031 [Drosophila grimshawi]
Length = 1201
Score = 117 bits (292), Expect = 2e-23, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 61/89 (68%)
Query: 165 WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCV 224
W H +FL PD I D R P HP+Y+ TL+VP +FL +P + QWW +KS N+DCV
Sbjct: 228 WPHQKLEFLQPDKIKDKAGRRPDHPEYDKSTLHVPEKFLNSLSPGVRQWWILKSDNYDCV 287
Query: 225 LFFKVGKFYELFHMDAVIGADELACSYMK 253
LFFKVGKFYEL+H DA +G EL +YM+
Sbjct: 288 LFFKVGKFYELYHSDADVGVKELGFTYMR 316
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 55/136 (40%), Positives = 80/136 (58%), Gaps = 10/136 (7%)
Query: 260 ESTLLTQLCNYESQTPS--GCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEV 317
E++LL +L +Q P+ G FPD+S+ LK+F++AFDH+ A G + P+ GVD +YDEV
Sbjct: 731 ETSLLQRL----TQLPTDGGSFPDLSKQLKFFQHAFDHEAADKTGVVAPQPGVDSDYDEV 786
Query: 318 MDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNH--QRVA 375
I +E+ ++TYL Q HFGC VIY + K K+Y LEVP +A K ++ +
Sbjct: 787 QQGIADVEQRLKTYLTEQERHFGCRVIYFGSDK--KRYQLEVPETHAHKVNKSYALEGQV 844
Query: 376 TKKKNVENYVTPECRG 391
KK Y T E +
Sbjct: 845 RGKKPARRYTTAETKA 860
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 3/109 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI---EDKR 446
RGT T DG IA + + C T+F+THYH++ + V +M+ + ED
Sbjct: 1052 RGTATYDGTAIAASVVNFLASLKCRTLFSTHYHNLIDFFHMDKRVTLGHMACMVENEDNT 1111
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
+ +T+ FLYK G CPKS+GFN A+LAG+ ++K ++ ++EA
Sbjct: 1112 DPTQETVTFLYKYTAGACPKSYGFNAAKLAGMSHGIIKRAYELSKKVEA 1160
>gi|321469768|gb|EFX80747.1| putative MSH6, mismatch repair ATPase [Daphnia pulex]
Length = 1310
Score = 116 bits (291), Expect = 3e-23, Method: Compositional matrix adjust.
Identities = 49/96 (51%), Positives = 64/96 (66%)
Query: 158 STSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIK 217
S S + +SH Y+FL P +I D RR P PDY+P+++Y+P F + TP M QWW +K
Sbjct: 324 SQSEGRQFSHLTYEFLKPANIRDGQRRRPDDPDYDPRSIYIPDSFKQSLTPAMRQWWEMK 383
Query: 218 SQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
+ NFD +LFFKVGKFYEL+H DA+I EL MK
Sbjct: 384 TNNFDVILFFKVGKFYELYHTDALIAVKELGIILMK 419
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 48/130 (36%), Positives = 74/130 (56%), Gaps = 5/130 (3%)
Query: 261 STLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDE 320
S LL Q SQ G FPDM E L++F AFDH++A+ G ++P+ GVDK+YD+ ++
Sbjct: 838 SKLLRQSVKLASQ--GGEFPDMDEELEFFRLAFDHQQAAKEGTMVPRPGVDKQYDQALER 895
Query: 321 IKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKN 380
I ++ + + YL Q HFG V + K K++ LEV AS+A ++ + ++K
Sbjct: 896 IAEVQADAEKYLLDQKRHFGGKVSFVGTDK--KRFQLEVSEAAASRANHKYE-LQGQRKG 952
Query: 381 VENYVTPECR 390
+ Y T E R
Sbjct: 953 FKRYYTNESR 962
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 45/122 (36%), Positives = 67/122 (54%), Gaps = 4/122 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI----EDK 445
RGT T DG IA ++ + C T+F+THYHS+ L P V +M+ + E+
Sbjct: 1170 RGTATFDGTAIAYSVVDHLARRQCRTLFSTHYHSLVHDLTSHPQVRLGHMACMVENDEEV 1229
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIH 505
+ + I+FLY+ V G CPKS+GF+ A LAG+ ++ G A +ME++ QLF
Sbjct: 1230 DDPSQENIIFLYQFVDGACPKSYGFHAARLAGLERSIISRGFQQAKRMESKMLSVQLFRD 1289
Query: 506 KF 507
F
Sbjct: 1290 LF 1291
>gi|347969433|ref|XP_312887.5| AGAP003190-PA [Anopheles gambiae str. PEST]
gi|333468522|gb|EAA08481.5| AGAP003190-PA [Anopheles gambiae str. PEST]
Length = 1290
Score = 115 bits (289), Expect = 4e-23, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 59/89 (66%)
Query: 165 WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCV 224
W+H FL P+ I D P Y+ +TL+VP +L TP M QWW +KS+NFDCV
Sbjct: 315 WTHQKLDFLKPNKIKDIHGNRPGSEKYDNRTLFVPDSYLNTLTPAMRQWWILKSKNFDCV 374
Query: 225 LFFKVGKFYELFHMDAVIGADELACSYMK 253
LFFKVGKFYEL+HMDA +G EL S+MK
Sbjct: 375 LFFKVGKFYELYHMDAEVGVTELGFSFMK 403
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 51/132 (38%), Positives = 77/132 (58%), Gaps = 4/132 (3%)
Query: 261 STLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDE 320
S LL +L + P+G FP M + +++FE++FDH++A +G+I+P+ G+D EYD + E
Sbjct: 821 SQLLVRLTQKANSNPAGAFPSMEKQIEFFESSFDHEKALKSGSIVPEKGLDTEYDTIEQE 880
Query: 321 IKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATK--K 378
IK + E++ YL Q FGCTV Y K K++ LEVP A KA ++ TK K
Sbjct: 881 IKDLNAELEAYLAEQSKFFGCTVKYFGNDK--KRFQLEVPEGRAKKATGDYTLEGTKTGK 938
Query: 379 KNVENYVTPECR 390
+ + T E R
Sbjct: 939 NATKRFHTEETR 950
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 45/144 (31%), Positives = 81/144 (56%), Gaps = 7/144 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRND 448
RGT T DG +A + + C T+F+THYH++ E+P +A +M+ +E++ D
Sbjct: 1150 RGTATYDGTAVAGAVVHFLADLKCRTMFSTHYHNLVDSFHEDPRIALGHMACMVENEEGD 1209
Query: 449 G--IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
+T+ FLY+ G CPKS+GFN A+LAG+P ++K ++ +E R++ +
Sbjct: 1210 DPTQETVTFLYRYTDGACPKSYGFNAAKLAGMPTAIIKRAYELSKTVEKEALKRKILM-- 1267
Query: 507 FASLVKSGEKVDVEELQKALESVK 530
L+K + ++++L L+S +
Sbjct: 1268 --KLLKQAPQNEIKDLVVKLKSFQ 1289
Score = 38.9 bits (89), Expect = 7.4, Method: Compositional matrix adjust.
Identities = 16/44 (36%), Positives = 22/44 (50%)
Query: 165 WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTP 208
W+H FL P+ I D P Y+ +TL+VP +L TP
Sbjct: 208 WTHQKLDFLKPNKIKDIHGNRPGSEKYDNRTLFVPDSYLNTLTP 251
>gi|260815207|ref|XP_002602365.1| hypothetical protein BRAFLDRAFT_283756 [Branchiostoma floridae]
gi|229287674|gb|EEN58377.1| hypothetical protein BRAFLDRAFT_283756 [Branchiostoma floridae]
Length = 1278
Score = 115 bits (288), Expect = 7e-23, Method: Compositional matrix adjust.
Identities = 68/156 (43%), Positives = 89/156 (57%), Gaps = 16/156 (10%)
Query: 113 TPMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPV------SDTSETTPSTS---GAQ 163
TP + K LSS S T +L PS+ +TP V +T S G++
Sbjct: 240 TPSRGKAKPDLSSFS---TPSSRLGTPSSTATPGGTVRTPGAHQNTKNKLAMFSAPEGSE 296
Query: 164 D---WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQT-PCMGQWWTIKSQ 219
+ + H Y+FL +I DA +R P DY+P+TLYVP FL K T P M +WW +KSQ
Sbjct: 297 EKAKFDHETYEFLQEGNIRDAKKRLPTDEDYDPRTLYVPDSFLMKNTTPLMRKWWEVKSQ 356
Query: 220 NFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
+D VLFFKVGKFYEL+HMDA+ G +EL +MK S
Sbjct: 357 LYDTVLFFKVGKFYELYHMDAITGVNELGLIFMKGS 392
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 49/118 (41%), Positives = 66/118 (55%), Gaps = 4/118 (3%)
Query: 390 RGTGTNDGCVIA-RVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA V E + C T+F+THYHS+ +PNV +M+ + + ND
Sbjct: 1160 RGTATYDGTAIACSVVKELSENLRCRTLFSTHYHSLVEEFSHDPNVRLGHMACMVENEND 1219
Query: 449 ---GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
+TI FLYK V G CPKS+GFN A LA +PE+V++ A + E +LF
Sbjct: 1220 EDPSQETITFLYKFVKGACPKSYGFNAARLADLPEEVIRVAQDKAKEFEENTERLKLF 1277
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/132 (35%), Positives = 71/132 (53%), Gaps = 2/132 (1%)
Query: 260 ESTLLTQLCNYESQTPSGC-FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVM 318
+S LL Q + ES G FP++S L YF+ AFDH A G IIPK GV+++YDE +
Sbjct: 824 KSKLLKQSISLESDKEGGGRFPNLSFQLMYFDRAFDHNAARKNGVIIPKEGVNRDYDEAL 883
Query: 319 DEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+IKS+ +E+ Y Q GC+ I S + +Y LE+P + + +++ K
Sbjct: 884 SDIKSVHREMDRYKDRQKQRMGCSTI-SFWSSGKTRYCLEIPESALKRHVPDEYELSSSK 942
Query: 379 KNVENYVTPECR 390
K + Y T E +
Sbjct: 943 KGFKRYTTQEIK 954
>gi|324501049|gb|ADY40473.1| DNA mismatch repair protein Msh6 [Ascaris suum]
Length = 1219
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 49/87 (56%), Positives = 60/87 (68%)
Query: 167 HNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLF 226
H + FL PD I DA+ R PDY P+TL+VP FLK+QTP QWW KS FD +L
Sbjct: 223 HLDFDFLQPDKIRDANGRLASDPDYCPRTLFVPEAFLKQQTPGHRQWWLAKSAYFDTMLL 282
Query: 227 FKVGKFYELFHMDAVIGADELACSYMK 253
FKVGKFYE++HMDAVIG + L +YM+
Sbjct: 283 FKVGKFYEMYHMDAVIGVENLNLTYMR 309
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 59/99 (59%), Gaps = 4/99 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA L + + C F+THYHS+ +R+ PN+ +M+ I D N
Sbjct: 1078 RGTSTHDGTAIAYAVLRALAEKVRCRAFFSTHYHSLCNAVRDVPNIKAAHMACIVDNENY 1137
Query: 449 G---IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
++ + FLY L G+CPKS+GF A+++GI +V++
Sbjct: 1138 SDPTLEHVTFLYSLTSGVCPKSYGFFAAKVSGIKPEVIR 1176
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 33/100 (33%), Positives = 57/100 (57%), Gaps = 1/100 (1%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
FPD+S L +F++AFDH +A G I+P+ G+D EYD VM++I+ ++++ YL
Sbjct: 765 FPDISNDLHHFKDAFDHDKAKQEGIIVPEKGIDAEYDGVMEDIRERMRDLEAYLHKIRKQ 824
Query: 339 FGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
GC I + +Y LE+P A ++ + +++K
Sbjct: 825 LGCERIQYMGSGRS-RYQLEIPEAIAQNLSADFELKSSRK 863
>gi|170054869|ref|XP_001863325.1| DNA mismatch repair protein MSH6 [Culex quinquefasciatus]
gi|167875012|gb|EDS38395.1| DNA mismatch repair protein MSH6 [Culex quinquefasciatus]
Length = 1130
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 58/89 (65%)
Query: 165 WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCV 224
W H FL PD I D Y+P+TL+VP +L TP M QWW +KS+++DCV
Sbjct: 163 WLHQKLDFLKPDKIKDIQGNKANSEKYDPRTLFVPESYLATLTPAMRQWWELKSRHYDCV 222
Query: 225 LFFKVGKFYELFHMDAVIGADELACSYMK 253
LFFKVGKFYEL+HMDA +G EL SYMK
Sbjct: 223 LFFKVGKFYELYHMDASVGVKELGFSYMK 251
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 46/144 (31%), Positives = 84/144 (58%), Gaps = 7/144 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND- 448
RGT T DG IA ++ ++ C ++F+THYH++ + + +M+ + +K +D
Sbjct: 990 RGTATYDGTSIAGAVVQFLAELKCRSMFSTHYHNLVDNFERDERILLGHMACMVEKEDDE 1049
Query: 449 --GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
+T+ FLYK PG CPKS+GFN A+LAG+P ++K ++ +EA R+ F
Sbjct: 1050 DPTQETVTFLYKYAPGSCPKSYGFNAAKLAGMPPQIIKRAYELSKTVEAEALKRKTFTK- 1108
Query: 507 FASLVKSGEKVDVEELQKALESVK 530
SL+++ ++ +V++L + L+ +
Sbjct: 1109 --SLLQA-DRTEVQDLLRKLKGCR 1129
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 72/224 (32%), Positives = 98/224 (43%), Gaps = 40/224 (17%)
Query: 171 QFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVL--FFK 228
+ L H R HPD LY + KK K Q+F C L F
Sbjct: 608 RMLAQIHSFGNAERMKNHPD-GRAILYEEQTYSKK-----------KIQDFICTLRGFKA 655
Query: 229 VGKFYELFHMDAVIGADELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKY 288
+ + ELF A + +D L LTQL G FPDM+ + +
Sbjct: 656 LTRLPELF---AGVKSDLL--------------IRLTQLT-----LKGGVFPDMASKISF 693
Query: 289 FENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEA 348
FE +FDH+ A G I P+ G+D EYD V +I+ I E++ Y R Q +FGC + Y +
Sbjct: 694 FEESFDHEAALKTGVIAPEKGLDTEYDAVQRDIQGILDELEEYKRKQEKYFGCKIDYFGS 753
Query: 349 QKKQKKYVLEVPSKYASKAKSNHQRVATK--KKNVENYVTPECR 390
K K++ LE+P A KA S + K K V+ Y T E R
Sbjct: 754 DK--KRFQLEIPEGAAKKANSGYSLEGQKKGKNGVKRYHTDETR 795
>gi|157130502|ref|XP_001661901.1| DNA mismatch repair protein muts [Aedes aegypti]
gi|108871885|gb|EAT36110.1| AAEL011780-PA [Aedes aegypti]
Length = 1130
Score = 115 bits (287), Expect = 8e-23, Method: Compositional matrix adjust.
Identities = 48/89 (53%), Positives = 58/89 (65%)
Query: 165 WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCV 224
W+H FL P+ I D P Y+ +TLYVP FL TP M QWW +K ++ DCV
Sbjct: 168 WAHQKLDFLKPEKIKDIQGNRPSSEKYDSRTLYVPESFLGTLTPAMRQWWELKCRHMDCV 227
Query: 225 LFFKVGKFYELFHMDAVIGADELACSYMK 253
LFFKVGKFYEL+HMDA +G +EL SYMK
Sbjct: 228 LFFKVGKFYELYHMDATVGVEELGFSYMK 256
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 52/132 (39%), Positives = 75/132 (56%), Gaps = 6/132 (4%)
Query: 261 STLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDE 320
S LL QL ++ G FPDM++ +++F+ AFDH++A G I P G+D EYD V E
Sbjct: 670 SKLLVQLT--QTSERGGSFPDMADKIRFFDEAFDHEQALKDGVIAPGEGLDAEYDAVHKE 727
Query: 321 IKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATK--K 378
IK+I +E++ Y R Q +FGC + + K K++ LE+P A KA S + K K
Sbjct: 728 IKNILEELEEYKRKQEKYFGCKIAFFGTDK--KRFQLEIPESAAKKANSGYTLEGHKKGK 785
Query: 379 KNVENYVTPECR 390
V+ Y T E R
Sbjct: 786 NGVKRYHTDETR 797
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 80/144 (55%), Gaps = 7/144 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI---EDKR 446
RGT T DG IA + + C ++F+THYH++ + V +M+ + ED
Sbjct: 990 RGTATYDGTSIAGAVVNFLADLKCRSMFSTHYHNLVDNFSTDSRVRLGHMACMVENEDDE 1049
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
+ +T+ FLYK G CPKS+GFN A+LAG+P ++K ++ +EA R++F +
Sbjct: 1050 DPTQETVTFLYKYADGACPKSYGFNAAKLAGMPACIIKRAHELSKTVEADALKRRIFTN- 1108
Query: 507 FASLVKSGEKVDVEELQKALESVK 530
SL++ + D++EL L++ +
Sbjct: 1109 --SLLQE-DPHDLKELLNKLKACR 1129
>gi|449496462|ref|XP_002196049.2| PREDICTED: DNA mismatch repair protein Msh6 [Taeniopygia guttata]
Length = 1359
Score = 114 bits (286), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 66/177 (37%), Positives = 93/177 (52%), Gaps = 11/177 (6%)
Query: 86 ESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAP------ 139
E+E S E E E E P ++ + +K KR SS + ++ PK A
Sbjct: 280 ENESSDTETEAESVAESPIKVPAKRKRREVKKPAKR--SSLGNECSETPKRAATVSSEAK 337
Query: 140 ---STPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTL 196
++ + P S + ++ +T G W H +L D RR PDY+P TL
Sbjct: 338 SKLTSFAAPESFESQANASSGATGGFSVWEHEKLDWLQEGKRRDVHRRRQGDPDYDPCTL 397
Query: 197 YVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
YVP ++L K TP + +WW +KSQNFD V+ +KVGKFYEL+HMDAV G +EL +MK
Sbjct: 398 YVPEDYLNKCTPGVRRWWQLKSQNFDAVICYKVGKFYELYHMDAVTGVNELGLIFMK 454
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 76/143 (53%), Gaps = 5/143 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ V +M+ +E++
Sbjct: 1216 RGTATFDGTAIASAVVQELAERIQCRTLFSTHYHSLVEDYSHCGAVRLGHMACMVENESE 1275
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA IPE+V++ G A + E L I +
Sbjct: 1276 DPSQETITFLYKFIEGACPKSYGFNAARLADIPEEVIQKGHRKAKEFE--KTTISLRIFR 1333
Query: 507 FASLVKSGEKVDVEELQKALESV 529
+ V G D ++K + +
Sbjct: 1334 YLCQVVDGTTCDANAVRKLMAMI 1356
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/138 (29%), Positives = 72/138 (52%), Gaps = 1/138 (0%)
Query: 251 YMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGV 310
+M+E +S +L QL +++ P G FPD+S L ++ AFDH +A G I PK G
Sbjct: 873 FMEEFASDFKSRVLKQLVTCKARNPDGRFPDLSAELTRWDTAFDHNQARKTGVITPKLGF 932
Query: 311 DKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
D +YD +++I+++E++++ YL Q G + K +Y +E+P S+
Sbjct: 933 DPDYDRALEDIRALEEDLRRYLDKQRKLLGSKSVQYWGTGKN-RYQMEIPESVISRNLPE 991
Query: 371 HQRVATKKKNVENYVTPE 388
+ + +K + Y T E
Sbjct: 992 EYELRSSRKGYKRYWTKE 1009
>gi|149242560|pdb|2O8B|B Chain B, Human Mutsalpha (Msh2MSH6) BOUND TO ADP AND A G T MISPAIR
gi|149242564|pdb|2O8C|B Chain B, Human Mutsalpha (msh2/msh6) Bound To Adp And An
O6-methyl-guanine T Mispair
gi|149242568|pdb|2O8D|B Chain B, Human Mutsalpha (Msh2MSH6) BOUND TO ADP AND A G DU MISPAIR
gi|149242572|pdb|2O8E|B Chain B, Human Mutsalpha (Msh2MSH6) BOUND TO A G T MISPAIR, WITH
ADP BOUND TO Msh2 Only
gi|149242576|pdb|2O8F|B Chain B, Human Mutsalpha (Msh2MSH6) BOUND TO DNA WITH A SINGLE BASE
T INSERT
Length = 1022
Score = 114 bits (285), Expect = 1e-22, Method: Compositional matrix adjust.
Identities = 53/108 (49%), Positives = 66/108 (61%), Gaps = 7/108 (6%)
Query: 153 SETTPSTSGAQD-------WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKK 205
SE+ SG D W H ++L + D RR P HPD++ TLYVP +FL
Sbjct: 8 SESQAHVSGGGDDSSRPTVWYHETLEWLKEEKRRDEHRRRPDHPDFDASTLYVPEDFLNS 67
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
TP M +WW IKSQNFD V+ +KVGKFYEL+HMDA+IG EL +MK
Sbjct: 68 CTPGMRKWWQIKSQNFDLVICYKVGKFYELYHMDALIGVSELGLVFMK 115
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 79/146 (54%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 879 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSQNVAVRLGHMACMVENECE 938
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 939 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 996
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L +K
Sbjct: 997 EVCLASERSTVDAEAVHKLLTLIKEL 1022
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 42/136 (30%), Positives = 74/136 (54%), Gaps = 3/136 (2%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+E +S +L Q+ + +++ P G FPD++ L ++ AFDH++A G I PKAG D
Sbjct: 537 MEEVADGFKSKILKQVISLQTKNPEGRFPDLTVELNRWDTAFDHEKARKTGLITPKAGFD 596
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSN 370
+YD+ + +I+ E+ + YL Q GC T++Y + +Y LE+P + ++
Sbjct: 597 SDYDQALADIRENEQSLLEYLEKQRNRIGCRTIVYWGIGR--NRYQLEIPENFTTRNLPE 654
Query: 371 HQRVATKKKNVENYVT 386
+ + KK + Y T
Sbjct: 655 EYELKSTKKGCKRYWT 670
>gi|302843362|ref|XP_002953223.1| hypothetical protein VOLCADRAFT_105835 [Volvox carteri f.
nagariensis]
gi|300261610|gb|EFJ45822.1| hypothetical protein VOLCADRAFT_105835 [Volvox carteri f.
nagariensis]
Length = 1515
Score = 114 bits (285), Expect = 2e-22, Method: Compositional matrix adjust.
Identities = 44/87 (50%), Positives = 62/87 (71%), Gaps = 2/87 (2%)
Query: 169 HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLK--KQTPCMGQWWTIKSQNFDCVLF 226
+ FLHPD+I DA++R P HP+Y+P+TLY+PP + K K + QWW K+ NFD VL
Sbjct: 386 RFSFLHPDNIRDANQRRPDHPEYDPRTLYIPPGWFKEFKISEGQQQWWNFKAHNFDSVLL 445
Query: 227 FKVGKFYELFHMDAVIGADELACSYMK 253
FK+GKFYE+F MDA +G + L ++M+
Sbjct: 446 FKMGKFYEMFEMDAYVGVEVLGLTFMR 472
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 44/126 (34%), Positives = 60/126 (47%), Gaps = 23/126 (18%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI-GCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A L+ + GC +FATHYH ++ +P VA +M+ + D
Sbjct: 1302 RGTATLDGAAVAGAVLQHLATVTGCRGLFATHYHHLSDEHANDPQVAVMHMACAVEGAAD 1361
Query: 449 G----------------------IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
G + + FLY+L PG CPKS+G NVA LAG+P VV
Sbjct: 1362 GEEAATAPSSVGNGTGGAGASSGAEEVTFLYRLTPGACPKSYGTNVARLAGLPPKVVIRA 1421
Query: 487 TTVAFQ 492
V+ Q
Sbjct: 1422 AEVSAQ 1427
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 16/140 (11%)
Query: 248 ACSYMKES--GCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNII 305
A S ++E+ G G S LL ++ ++ P+ ++S L+ E A D KEA++ G +
Sbjct: 941 ALSRLREAMQGGGGGSELLRRIV-FDRCRPA----EVSSALEALEGATDWKEAAATGRAV 995
Query: 306 PK-------AGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLE 358
P+ GVD+EYD M+ + ++E+++Q YL+ FG V K +++E
Sbjct: 996 PEQVAGVGVGGVDEEYDAAMEAVDTVERKMQDYLKELRQRFGRDVNLVSVNKDS--HLVE 1053
Query: 359 VPSKYASKAKSNHQRVATKK 378
VP A K V +K
Sbjct: 1054 VPDSVAGKLGGEFHLVGNRK 1073
>gi|33504503|ref|NP_878280.1| DNA mismatch repair protein Msh6 [Danio rerio]
gi|27882481|gb|AAH44350.1| MutS homolog 6 (E. coli) [Danio rerio]
Length = 1369
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 75/128 (58%), Gaps = 4/128 (3%)
Query: 130 PTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQD----WSHNHYQFLHPDHILDADRRS 185
P P ++ + +F D ++ S +G + W H ++L DA R+
Sbjct: 325 PAALPSVSTDAKSRLSAFSAPDNFDSQSSANGTEGGSTVWDHEKLEWLQDGKRKDAQRKR 384
Query: 186 PKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGAD 245
+Y+P TLYVP +FL + TP M +WW +KS+ FD VLF+KVGKFYEL+HMDAVIG +
Sbjct: 385 QSDENYDPTTLYVPEDFLNRTTPGMRRWWQLKSEMFDTVLFYKVGKFYELYHMDAVIGVN 444
Query: 246 ELACSYMK 253
EL ++MK
Sbjct: 445 ELNLTFMK 452
Score = 90.9 bits (224), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 83/146 (56%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ ++P V +M+ +E++
Sbjct: 1226 RGTATYDGTAIASAVVKELSEKICCRTLFSTHYHSLVEDHVQDPAVRLGHMACMVENECE 1285
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA IPEDV++ G A E R + K
Sbjct: 1286 DPSQETITFLYKFIRGACPKSYGFNAARLANIPEDVIQSGHKKARDFE-RSTVSLRIFKK 1344
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
S +S + + E+L ++++++
Sbjct: 1345 LCSFAES-PRAEREQLTTLIQTLRNL 1369
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 1/137 (0%)
Query: 250 SYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAG 309
S M+ G +S LL Q+ +++ G FPD+S LK ++ AFDH++A + G I PKAG
Sbjct: 874 SIMEPVGEDLKSKLLRQVVLLKTENEDGLFPDLSPELKRWDTAFDHQKARTTGVITPKAG 933
Query: 310 VDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKS 369
D EYD+ ++ IK E+++Q YL Q GC + S + +Y LEVP + ++
Sbjct: 934 FDPEYDQALNGIKECERDLQDYLDRQKKRLGCKNL-SYWGTGRNRYQLEVPESVSERSLP 992
Query: 370 NHQRVATKKKNVENYVT 386
V + KK + Y T
Sbjct: 993 EEYEVRSTKKGWKRYST 1009
>gi|410901537|ref|XP_003964252.1| PREDICTED: DNA mismatch repair protein Msh6-like [Takifugu
rubripes]
Length = 1373
Score = 113 bits (282), Expect = 3e-22, Method: Compositional matrix adjust.
Identities = 76/206 (36%), Positives = 104/206 (50%), Gaps = 35/206 (16%)
Query: 72 SEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPT 131
S+DE+ P +A SE E EE S E+ + E +P+K +K +P
Sbjct: 267 SDDEFKPEQAASSSEDE----EEGAAVSSEEEGTAQETEEDSPVK-------PTKRKRPA 315
Query: 132 KKP---KLTAPSTPSTP-----------------SFPVSDTSETTPSTSGAQD----WSH 167
KP K P TPS P +F ++ E+ S SG + W H
Sbjct: 316 GKPAPTKAKVPLTPSNPPKRAPAAVSADTKSRLSAFSAPESFESQASGSGVEGEATVWDH 375
Query: 168 NHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFF 227
++L D RR DY+P TLYVP +FL + TP M +WW +KS+ FD V+F+
Sbjct: 376 EKLEWLRDGRRKDGGRRRQGCEDYDPSTLYVPEDFLNRITPGMRRWWQLKSKMFDTVIFY 435
Query: 228 KVGKFYELFHMDAVIGADELACSYMK 253
KVGKFYEL+HMDAVIG +EL ++MK
Sbjct: 436 KVGKFYELYHMDAVIGVNELGLTFMK 461
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA + + + I C T+F+THYHS+ + P V +M+ +E++
Sbjct: 1230 RGTATYDGTAIASAVVNELAERIRCRTLFSTHYHSLVEDYAKNPAVRLGHMACMVENECE 1289
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
D +TI FLYK V G CPKS+GFN A LA +PE+V++ G A + E +LF
Sbjct: 1290 DPSQETITFLYKFVSGACPKSYGFNAARLANLPEEVIQCGHDKAREFERSTGSLRLF 1346
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 70/129 (54%), Gaps = 2/129 (1%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+STLL Q+ + + + G FPD+S L+ +E AFDH++A + G I PKAG D EYD+ +
Sbjct: 894 QSTLLRQVVSLKGEG-GGLFPDLSAELRRWETAFDHQKARTTGVITPKAGFDPEYDQALA 952
Query: 320 EIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKK 379
IK+ E E+ YL Q GC + + +Y +EVP + + V + KK
Sbjct: 953 GIKTCEGELNDYLDRQKKRLGCKNMAYWGTGRN-RYQMEVPDSVSDRNIPREYEVKSTKK 1011
Query: 380 NVENYVTPE 388
+ YVT E
Sbjct: 1012 GWKRYVTRE 1020
>gi|15625580|gb|AAL04170.1|AF412834_1 mismatch repair protein Msh6 [Danio rerio]
Length = 1369
Score = 113 bits (282), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 52/128 (40%), Positives = 75/128 (58%), Gaps = 4/128 (3%)
Query: 130 PTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQD----WSHNHYQFLHPDHILDADRRS 185
P P ++ + +F D ++ S +G + W H ++L DA R+
Sbjct: 325 PAALPSVSTDAKSRLSAFSAPDNFDSQNSANGTEGGSTVWDHEKLEWLQDGKRKDAQRKR 384
Query: 186 PKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGAD 245
+Y+P TLYVP +FL + TP M +WW +KS+ FD VLF+KVGKFYEL+HMDAVIG +
Sbjct: 385 QSDENYDPTTLYVPEDFLNRTTPGMRRWWQLKSEMFDTVLFYKVGKFYELYHMDAVIGVN 444
Query: 246 ELACSYMK 253
EL ++MK
Sbjct: 445 ELNLTFMK 452
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 83/146 (56%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ ++P V +M+ +E++
Sbjct: 1226 RGTATYDGTAIASAVVKELSEKICCRTLFSTHYHSLVEDHVQDPAVRLGHMACMVENECE 1285
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA IPEDV++ G A E R + K
Sbjct: 1286 DPSQETITFLYKFIRGACPKSYGFNAARLANIPEDVIQSGHKKARDFE-RSTVSLRIFKK 1344
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
S +S + + E+L ++++++
Sbjct: 1345 LCSFAES-PRAEREQLTTLIQTLRNL 1369
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 49/137 (35%), Positives = 75/137 (54%), Gaps = 1/137 (0%)
Query: 250 SYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAG 309
S M+ G +S LL Q+ +++ G FPD+S LK ++ AFDH++A + G I PKAG
Sbjct: 874 SIMEPVGEGLKSKLLRQVVLLKTENEDGLFPDLSPELKRWDTAFDHQKARTTGVITPKAG 933
Query: 310 VDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKS 369
D EYD+ ++ IK E+++Q YL Q GC + S + +Y LEVP + ++
Sbjct: 934 FDPEYDQALNGIKECERDLQDYLDRQKKRLGCKNL-SYWGTGRNRYQLEVPESVSERSLP 992
Query: 370 NHQRVATKKKNVENYVT 386
V + KK + Y T
Sbjct: 993 EEYEVRSTKKGWKRYST 1009
>gi|17508447|ref|NP_491163.1| Protein MSH-6 [Caenorhabditis elegans]
gi|373220156|emb|CCD72556.1| Protein MSH-6 [Caenorhabditis elegans]
Length = 1186
Score = 112 bits (281), Expect = 4e-22, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 65/94 (69%)
Query: 162 AQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNF 221
A+ + H + FL PD I D +R P+Y+PKTL+VPP+F +KQTP QWWT+KSQ+F
Sbjct: 206 AERFDHESFDFLKPDKIRDGFKRPMSDPEYDPKTLWVPPDFHQKQTPGHRQWWTMKSQHF 265
Query: 222 DCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
D +L FKVGKFYE +HMDAV L ++M+ S
Sbjct: 266 DTILLFKVGKFYETYHMDAVEVVRALNIAFMRGS 299
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 78/147 (53%), Gaps = 12/147 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L+K + C T F+THYHS+ PNV +M + DK N+
Sbjct: 1045 RGTSTFDGTAIASAVLQKISDDLACRTFFSTHYHSICDSFTNHPNVRLAHMKCVVDKENN 1104
Query: 449 ---GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIH 505
++ + FLY+L GICPKS+GF A+LAGI VV+ +E+ L I
Sbjct: 1105 EDPTMEDVTFLYELESGICPKSYGFYAAKLAGIDHQVVRNA-----YLESNKFASNLIID 1159
Query: 506 -KFASLVKSG--EKVDVEELQKALESV 529
K LV+ + DV EL++ +E++
Sbjct: 1160 PKIRHLVECARDDNFDVGELKRMIEAI 1186
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 64/270 (23%), Positives = 108/270 (40%), Gaps = 37/270 (13%)
Query: 120 KRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHIL 179
+R L S QPT PK + D S + + + + L H +
Sbjct: 608 RRLLRSWLLQPTCDPKKLEQRQKAIKWLVSPDASSFMTTATATLKKIPDLDRLLQKIHTI 667
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFH-M 238
RS KHPD + ++ TIK+ K EL +
Sbjct: 668 GLKYRSEKHPD--SRAIFFD---------------TIKTNQ---------KKIAELLAAI 701
Query: 239 DAVIGADELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEA 298
D ++L Y+K LL +L E + ++ E + +FE FD A
Sbjct: 702 DGFKLCNKLRKEYIKVQKEGEGCELLDELLGNEQE-----MEEVDENIYFFEKMFDRSTA 756
Query: 299 SSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLE 358
G I+P AG D+EYDE ++ +K E+ Y + + C++ + ++ K KY+LE
Sbjct: 757 MKDGKIVPNAGCDEEYDEALNRVKEALNELNDYKDSVAKKYSCSIKFVDSGK--VKYLLE 814
Query: 359 VPSKYASKAKSNHQRVATKKKNVENYVTPE 388
+P +K S+ + + +++K Y TP+
Sbjct: 815 MPEN--TKVSSSFE-LKSRRKGFIRYSTPD 841
>gi|268564536|ref|XP_002639138.1| C. briggsae CBR-MSH-6 protein [Caenorhabditis briggsae]
Length = 1185
Score = 110 bits (276), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 48/91 (52%), Positives = 63/91 (69%)
Query: 165 WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCV 224
+ H +L PD I DA +R+ P+Y+PKTL+VPP+F KQTP QWWTIKSQ+FD +
Sbjct: 205 FDHESLDWLKPDKIRDASKRAMSDPEYDPKTLWVPPDFHLKQTPGHRQWWTIKSQHFDTI 264
Query: 225 LFFKVGKFYELFHMDAVIGADELACSYMKES 255
+ FKVGKFYE +HMDAV L ++M+ S
Sbjct: 265 ILFKVGKFYETYHMDAVEVVRALNIAFMRGS 295
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 52/146 (35%), Positives = 79/146 (54%), Gaps = 10/146 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L+K + C T F+THYHS+ PN+ +M + DK N+
Sbjct: 1044 RGTSTFDGTAIASAVLQKIANDLVCRTFFSTHYHSICDSFTNHPNIRLAHMKCVVDKENN 1103
Query: 449 ---GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIH 505
++ + FLY+L GICPKS+GF A+LAGI + VV+ VA+ + +
Sbjct: 1104 EDPTMEDVTFLYELESGICPKSYGFYAAKLAGIDQKVVR----VAYAESNKFASNLIIDP 1159
Query: 506 KFASLVKSG--EKVDVEELQKALESV 529
K LV+ + DV +L++ +E++
Sbjct: 1160 KIRHLVECARDDSFDVTKLKQMIEAI 1185
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 37/126 (29%), Positives = 62/126 (49%), Gaps = 10/126 (7%)
Query: 263 LLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIK 322
LL +L E Q ++ E + YFE FD A G I+P AG D EYD+ ++K
Sbjct: 725 LLDELLGNEQQVE-----EVDENIFYFEKMFDRTTALKDGKIVPNAGCDDEYDQATAKVK 779
Query: 323 SIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVE 382
E+ Y + C++ + ++ K KY+LE+P +K S+ + + +++K
Sbjct: 780 EALSELNAYKDKIAKKYSCSIKFVDSGK--VKYLLEMPEN--TKVSSDFE-LKSRRKGFI 834
Query: 383 NYVTPE 388
Y TP+
Sbjct: 835 RYSTPD 840
>gi|308505948|ref|XP_003115157.1| CRE-MSH-6 protein [Caenorhabditis remanei]
gi|308259339|gb|EFP03292.1| CRE-MSH-6 protein [Caenorhabditis remanei]
Length = 1181
Score = 110 bits (275), Expect = 2e-21, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 64/94 (68%)
Query: 162 AQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNF 221
A+ + H +L PD I D +R P+Y+PKTL+VPPEF +KQTP QWWTIKSQ+F
Sbjct: 193 AERFDHESLDWLKPDKIRDGCKRPMSDPEYDPKTLWVPPEFHQKQTPGHRQWWTIKSQHF 252
Query: 222 DCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
D ++ FKVGKFYE +HMDAV L ++M+ S
Sbjct: 253 DTIILFKVGKFYETYHMDAVEVVRALNIAFMRGS 286
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 75/152 (49%), Gaps = 22/152 (14%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L+K I C T F+THYHS+ NV +M + DK N+
Sbjct: 1040 RGTSTFDGTAIASAVLQKIADDIICRTFFSTHYHSICDSFTNHENVRLAHMKCVVDKENN 1099
Query: 449 ---GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV--------KFGTTVAFQMEARH 497
++ + FLY+L GICPKS+GF A+LAGI VV KF + + + RH
Sbjct: 1100 EDPTMEDVTFLYELESGICPKSYGFYAAKLAGIDHQVVRNAYAESNKFASNLIIDPKIRH 1159
Query: 498 NLRQLFIHKFASLVKSGEKVDVEELQKALESV 529
+ E DV +L++ +E++
Sbjct: 1160 LVE----------CARNESFDVSKLREMIEAI 1181
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 63/269 (23%), Positives = 106/269 (39%), Gaps = 35/269 (13%)
Query: 120 KRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHIL 179
+R L S QPT PK + SD + + + + L H +
Sbjct: 598 RRLLRSWLLQPTCDPKKLRLRQEAVKWMTSSDATSFVNVATATLKKIPDLDRLLQKIHTI 657
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
R+ KHPD + ++ TIK+ K+G+ L +D
Sbjct: 658 GLKYRAEKHPD--SRAIFFD---------------TIKTNQK------KIGEL--LSAID 692
Query: 240 AVIGADELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEAS 299
++L Y+K LL +L E Q ++ E + +FE FD A
Sbjct: 693 GFKLCNQLRKEYLKVQKDGEGCELLDELLGNEQQ-----MEEVDENIYFFEKMFDRTTAQ 747
Query: 300 SAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEV 359
G I+P G D+EYD+ +K E+ Y T + C + + ++ K KY+LE+
Sbjct: 748 KDGKIVPNEGCDEEYDQATARVKEALGELNAYKDTIAKKYSCAIKFVDSGK--VKYLLEM 805
Query: 360 PSKYASKAKSNHQRVATKKKNVENYVTPE 388
P +K S+ + + +++K Y TP+
Sbjct: 806 PEN--AKVSSSFE-LKSRRKGFIRYSTPD 831
>gi|341882591|gb|EGT38526.1| hypothetical protein CAEBREN_00497 [Caenorhabditis brenneri]
Length = 1144
Score = 108 bits (271), Expect = 5e-21, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 64/91 (70%)
Query: 165 WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCV 224
+ H +L P+ I DA +R+ P+Y+PKTL+VPP+F +KQTP QWWTIKSQ+FD +
Sbjct: 164 FDHESLDWLKPEKIRDACKRTMSDPEYDPKTLWVPPDFHQKQTPGHRQWWTIKSQHFDTI 223
Query: 225 LFFKVGKFYELFHMDAVIGADELACSYMKES 255
+ FKVGKFYE +HMDAV L ++M+ S
Sbjct: 224 ILFKVGKFYETYHMDAVEVVRALNIAFMRGS 254
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 56/147 (38%), Positives = 79/147 (53%), Gaps = 12/147 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L+K + C T F+THYHS+ + PNV +M + DK N+
Sbjct: 1003 RGTSTFDGTAIASAVLQKIADDVMCRTFFSTHYHSICNSFTDHPNVRLAHMKCVVDKENN 1062
Query: 449 ---GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIH 505
++ + FLY+L GICPKS+GF A+LAGI ++VV+ E+ L I
Sbjct: 1063 EDPTMEDVTFLYELESGICPKSYGFYAAKLAGIDQEVVRKAYA-----ESNKFASNLIID 1117
Query: 506 -KFASLVKSG--EKVDVEELQKALESV 529
K LVK E D+ EL+ +E++
Sbjct: 1118 PKIRQLVKCARDENFDINELKSMIEAL 1144
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 57/222 (25%), Positives = 96/222 (43%), Gaps = 43/222 (19%)
Query: 171 QFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVG 230
+ L H + RS KHPD + ++ TIK+ K+G
Sbjct: 617 RLLQKIHTIGLKYRSEKHPD--SRAIFFD---------------TIKTNQK------KIG 653
Query: 231 KFYELFHMDAVIGADELACSYMKES----GCTGESTLLTQLCNYESQTPSGCFPDMSELL 286
+ L +D ++L YMK GC +L +L Q ++ E +
Sbjct: 654 EL--LAAIDGFKLCNKLRKEYMKVQQEGEGCE----ILDELLGNTEQ-----MEEVDENI 702
Query: 287 KYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYS 346
+FE FD A G I+P AG D+EYDE ++++K E+ +Y T + C++ +
Sbjct: 703 MFFEKMFDRTTALKDGKIVPNAGCDEEYDEALEKVKEAMGELNSYKDTIAKKYSCSIKFV 762
Query: 347 EAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPE 388
++ K KY+LE+P S S+ + +++K Y TP+
Sbjct: 763 DSGK--VKYLLEMPE---SIKVSSSFELKSRRKGFIRYSTPD 799
>gi|341900974|gb|EGT56909.1| CBN-MSH-6 protein [Caenorhabditis brenneri]
Length = 1193
Score = 107 bits (267), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 47/91 (51%), Positives = 63/91 (69%)
Query: 165 WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCV 224
+ H +L P+ I DA +R P+Y+PKTL+VPP+F +KQTP QWWTIKSQ+FD +
Sbjct: 199 FDHESLDWLKPEKIRDACKRPMSDPEYDPKTLWVPPDFHQKQTPGHRQWWTIKSQHFDTI 258
Query: 225 LFFKVGKFYELFHMDAVIGADELACSYMKES 255
+ FKVGKFYE +HMDAV L ++M+ S
Sbjct: 259 ILFKVGKFYETYHMDAVEVVRALNIAFMRGS 289
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 55/147 (37%), Positives = 79/147 (53%), Gaps = 12/147 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L+K + C T F+THYHS+ + PNV +M + DK N+
Sbjct: 1052 RGTSTFDGTAIASAVLQKIADDVMCRTFFSTHYHSICNSFTDHPNVRLAHMKCVVDKENN 1111
Query: 449 ---GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIH 505
++ + FLY+L GICPKS+GF A+LAGI ++VV+ E+ L I
Sbjct: 1112 EDPTMEDVTFLYELESGICPKSYGFYAAKLAGIDQEVVRKAYA-----ESNKFASNLIID 1166
Query: 506 -KFASLVKSG--EKVDVEELQKALESV 529
K LV+ E D+ EL+ +E++
Sbjct: 1167 PKIRQLVECARDENFDINELKSMIEAL 1193
Score = 56.2 bits (134), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 57/227 (25%), Positives = 95/227 (41%), Gaps = 39/227 (17%)
Query: 171 QFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVG 230
+ L H + RS KHPD + ++ TIK+ K+G
Sbjct: 652 RLLQKIHTIGLKYRSEKHPD--SRAIFFD---------------TIKTNQK------KIG 688
Query: 231 KFYELFHMDAVIGADELACSYMKES----GCTGESTLLTQLCNYESQTPSGCFPDMSELL 286
+ L +D ++L YMK GC LL E + F ++ L
Sbjct: 689 EL--LAAIDGFKLCNKLRKEYMKVQQEGEGCEILDELLGNTEQMEEVDENIMFFEVFYTL 746
Query: 287 KYF-----ENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGC 341
+F + FD A G I+P AG D+EYDE ++++K E+ +Y T + C
Sbjct: 747 FFFFAYNFQKMFDRTTALKDGKIVPNAGCDEEYDEALEKVKEAMGELNSYKDTIAKKYSC 806
Query: 342 TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPE 388
++ + ++ K KY+LE+P S S+ + +++K Y TP+
Sbjct: 807 SIKFVDSGK--VKYLLEMPE---SIKVSSSFELKSRRKGFIRYSTPD 848
>gi|384246687|gb|EIE20176.1| hypothetical protein COCSUDRAFT_18682, partial [Coccomyxa
subellipsoidea C-169]
Length = 1204
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 50/119 (42%), Positives = 71/119 (59%), Gaps = 2/119 (1%)
Query: 137 TAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTL 196
A +TP+T + +D E + + + + FL P I DA R+ P P YNP+TL
Sbjct: 193 AALNTPATAAKGGADDVEPASDMARYAKRAEDRFPFLSPQEIRDATRKRPGQPGYNPRTL 252
Query: 197 YVPPEFLKKQTPCMGQ--WWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
Y+P ++ KK GQ WW K+Q+FD V+ FK+GKFYE+F MDA +GA+ L +YMK
Sbjct: 253 YIPHDWFKKAKVSEGQRQWWEFKAQHFDSVMLFKMGKFYEMFEMDAHVGAEVLGLTYMK 311
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 55/95 (57%), Gaps = 1/95 (1%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA + F Q I C +FATHYH +A ++P + +M+ D+
Sbjct: 1037 RGTATTDGAAIAAAVIHAFTQRIKCRGLFATHYHKLADAHADDPTTSIRHMACHVDRDAA 1096
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
G + + FLY+L G CPKS+G A LAG+P+ ++
Sbjct: 1097 GREQVTFLYQLQDGACPKSYGTACARLAGMPDAIL 1131
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 26/107 (24%), Positives = 52/107 (48%), Gaps = 2/107 (1%)
Query: 282 MSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGC 341
M+ LK + D ++A+ G +IP G + +D + ++E E + +L+ GC
Sbjct: 730 MARPLKELQAFTDWEQAAELGRVIPHPGAEAAFDNADARVAAVEAEFEQHLKEVKKKLGC 789
Query: 342 TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPE 388
+ I S + ++L++P A S+++ V +KK + Y +P
Sbjct: 790 SSI-SYVSVNKDSHLLDIPDSAAGSVPSSYELVG-QKKGWKRYRSPR 834
>gi|47228957|emb|CAG09472.1| unnamed protein product [Tetraodon nigroviridis]
Length = 1235
Score = 107 bits (266), Expect = 2e-20, Method: Compositional matrix adjust.
Identities = 52/125 (41%), Positives = 74/125 (59%), Gaps = 4/125 (3%)
Query: 133 KPKLTAPSTPSTPSFPVSDTSETTPSTSG----AQDWSHNHYQFLHPDHILDADRRSPKH 188
+ L+A + +F ++ E+ + SG A W H ++L D RR
Sbjct: 225 RAALSADTKSRLSAFSAPESLESQANGSGTGAEAAAWDHEKLEWLQEGRRRDGRRRRQSD 284
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
DY+ TLYVP +FL + TP M +WW +KSQ FD V+F+KVGKFYEL+HMDAV+G +EL
Sbjct: 285 ADYDAATLYVPEDFLNRVTPGMRRWWQLKSQMFDTVIFYKVGKFYELYHMDAVVGVNELG 344
Query: 249 CSYMK 253
++MK
Sbjct: 345 LTFMK 349
Score = 81.6 bits (200), Expect = 9e-13, Method: Compositional matrix adjust.
Identities = 46/128 (35%), Positives = 68/128 (53%), Gaps = 2/128 (1%)
Query: 261 STLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDE 320
STLL Q+ + + G FPD+S L+ +E AFDH++A + G I PKAG D EYD+ +
Sbjct: 782 STLLRQVIRVKREG-GGLFPDLSVELRRWEKAFDHQKARNTGVITPKAGFDPEYDQALAG 840
Query: 321 IKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKN 380
I+ E E+ YL Q GC + + +Y +EVP + ++ V + KK
Sbjct: 841 IRGREGELNDYLDRQRKRLGCRNMAYWGTGRN-RYQMEVPDSVSERSVPQEYEVKSTKKG 899
Query: 381 VENYVTPE 388
+ YVT E
Sbjct: 900 WKRYVTKE 907
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 67/123 (54%), Gaps = 9/123 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYM-------SY 441
RGT T DG IA +++ + I C T+F+THYHS+ + V +M
Sbjct: 1112 RGTATYDGTAIASAVVKELAERICCRTLFSTHYHSLVEDYAKNHAVRLGHMVRNTLQACM 1171
Query: 442 IEDKRND-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR 500
+E++ D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E
Sbjct: 1172 VENECEDPSQETITFLYKFISGACPKSYGFNAARLASLPEEVIQCGQGKAREFERSTTSL 1231
Query: 501 QLF 503
+LF
Sbjct: 1232 RLF 1234
>gi|336109966|gb|AEI16751.1| mutS protein 6 [Heloderma suspectum]
Length = 361
Score = 105 bits (261), Expect = 9e-20, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 54/65 (83%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++LK TP M +WW +KSQNFDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PDYDPSTLFVPEDYLKNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336109980|gb|AEI16758.1| mutS protein 6 [Shinisaurus crocodilurus]
Length = 360
Score = 103 bits (258), Expect = 2e-19, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 54/65 (83%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++LK TP M +WW +KSQNFDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PDYDPGTLFVPEDYLKNCTPGMRKWWELKSQNFDCVVFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|307103773|gb|EFN52031.1| hypothetical protein CHLNCDRAFT_139631 [Chlorella variabilis]
Length = 1074
Score = 103 bits (256), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 55/102 (53%), Positives = 67/102 (65%), Gaps = 5/102 (4%)
Query: 154 ETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLK--KQTPCMG 211
E P SG D + FLHPD I DA RR P DY+P+TLYVPPE+L+ K +P
Sbjct: 403 ELAPRFSGRVD---AAFPFLHPDRIRDAARRRPDDLDYDPRTLYVPPEWLRQNKVSPGQQ 459
Query: 212 QWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
QWW K+Q++DCVL FK+GKFYELF MDA + + L SYMK
Sbjct: 460 QWWEFKAQHYDCVLLFKMGKFYELFEMDAHVAVEVLGLSYMK 501
Score = 38.5 bits (88), Expect = 9.8, Method: Compositional matrix adjust.
Identities = 27/90 (30%), Positives = 44/90 (48%), Gaps = 7/90 (7%)
Query: 224 VLFFKVGKFYELFHMDAVIGADEL--ACSYMKESGCTGESTLLTQLCNYESQTPSGCFPD 281
+L+ V + + A+ G ++ A + +E G S+LL +L TP FPD
Sbjct: 841 ILYEDVARRRVKAYAAALKGLQQIQDAAAAFQELGDGISSSLLRRLV-----TPGELFPD 895
Query: 282 MSELLKYFENAFDHKEASSAGNIIPKAGVD 311
M+ L ++A D EA ++G + P GVD
Sbjct: 896 MAAALAEMQSATDWAEAEASGRVEPARGVD 925
>gi|336109988|gb|AEI16762.1| mutS protein 6 [Varanus exanthematicus]
Length = 215
Score = 102 bits (255), Expect = 4e-19, Method: Compositional matrix adjust.
Identities = 41/65 (63%), Positives = 54/65 (83%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++LK TP M +WW +KSQNFDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PDYDPSTLFVPEDYLKNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LLFMK 65
>gi|336109962|gb|AEI16749.1| mutS protein 6 [Elgaria multicarinata]
Length = 361
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 54/65 (83%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++LK +P M +WW +KSQNFDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PDYDPGTLFVPEDYLKNCSPGMRKWWELKSQNFDCVVFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|118368049|ref|XP_001017234.1| MutS domain III family protein [Tetrahymena thermophila]
gi|89299001|gb|EAR96989.1| MutS domain III family protein [Tetrahymena thermophila SB210]
gi|311992449|gb|ADQ26782.1| putative mismatch repair protein [Tetrahymena thermophila]
Length = 1232
Score = 102 bits (254), Expect = 6e-19, Method: Compositional matrix adjust.
Identities = 46/88 (52%), Positives = 62/88 (70%)
Query: 172 FLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGK 231
F P++ +D+ +R P+Y+P TLYVPPE LK+ TP M Q+W IKS NFD +LFFK+GK
Sbjct: 231 FALPENAMDSKKRKRTDPNYDPTTLYVPPESLKQFTPVMRQYWEIKSTNFDKILFFKLGK 290
Query: 232 FYELFHMDAVIGADELACSYMKESGCTG 259
FYELF+ DA+I EL ++M + TG
Sbjct: 291 FYELFYEDALITHKELDLNWMGKKMHTG 318
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 84/146 (57%), Gaps = 15/146 (10%)
Query: 390 RGTGTNDGCVIA----RVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIED 444
RGT T DG IA R +E LQ CL FATHYH + R P +A+ +M+ ++++
Sbjct: 1086 RGTSTFDGVAIAYSIVRYLVEN-LQSRCL--FATHYHVLLDEFRHYPQIAYYHMACHVDE 1142
Query: 445 KRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF- 503
KR+ ++FLY+L G C SFG NVA++ GI +++++ A + E N++ +
Sbjct: 1143 KRS----KVIFLYRLKAGECSSSFGINVAKVVGISDNLIEIAKQKAKEFEENLNIQHAYN 1198
Query: 504 -IHKFASLVKSGEKVDVEE-LQKALE 527
+F L+K+ ++ D +E L++ +E
Sbjct: 1199 TNKRFGILMKAIQEYDRDENLEQIIE 1224
>gi|449436747|ref|XP_004136154.1| PREDICTED: DNA mismatch repair protein MSH6-like [Cucumis sativus]
Length = 1307
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 47/84 (55%), Positives = 59/84 (70%), Gaps = 1/84 (1%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
++FL D DA++R P PDY+PKTL++PP F+K + QWW KS++ D VLFFK+
Sbjct: 309 FRFLKEDRK-DANKRCPGDPDYDPKTLHLPPYFVKNLSDGQRQWWEFKSKHMDKVLFFKM 367
Query: 230 GKFYELFHMDAVIGADELACSYMK 253
GKFYELF MDA IGA EL YMK
Sbjct: 368 GKFYELFEMDAHIGAKELDLQYMK 391
Score = 95.9 bits (237), Expect = 6e-17, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 68/111 (61%), Gaps = 1/111 (0%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA LE F+ ++ C VF+THYH +A ++P V+ +M+ + N+
Sbjct: 1137 RGTATSDGQAIAESVLEHFVSKVQCRGVFSTHYHRLALAYHKDPRVSLHHMACRVGEGNN 1196
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
G++ + FLY+L PG CPKS+G NVA LAG+P V+ + + E + +
Sbjct: 1197 GLEEVTFLYRLTPGTCPKSYGVNVARLAGLPNCVLTEAAAKSMEFEVTYGM 1247
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 38/117 (32%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 274 TPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLR 333
TP PD+ +L +F++AFD EA+S+G +IP+ GVD EYD ++I+ I+ + +L+
Sbjct: 822 TPGEGLPDLHSVLSHFKDAFDWVEANSSGRVIPREGVDVEYDSACEKIREIQSSLTKHLK 881
Query: 334 TQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
Q G T I K+ ++LEVP ++ + + KK Y TP +
Sbjct: 882 EQRKLLGDTSITYVTVGKE-THLLEVPESLQGNIPQTYE-LRSSKKGFFRYWTPNIK 936
>gi|336110046|gb|AEI16791.1| mutS protein 6 [Gambelia wislizenii]
Length = 361
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 54/65 (83%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P+Y+P TL+VP ++L+ TP M +WW +KSQNFDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PEYDPTTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNQLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336110080|gb|AEI16808.1| mutS protein 6 [Urostrophus vautieri]
Length = 357
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 54/65 (83%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P+Y+P TL+VP ++L+ TP M +WW +KSQNFDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PEYDPTTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNQLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|15235223|ref|NP_192116.1| DNA mismatch repair protein Msh6-1 [Arabidopsis thaliana]
gi|6226648|sp|O04716.2|MSH6_ARATH RecName: Full=DNA mismatch repair protein MSH6; Short=AtMSH6;
AltName: Full=MutS protein homolog 6
gi|3912921|gb|AAC78699.1| G/T DNA mismatch repair enzyme [Arabidopsis thaliana]
gi|5763966|emb|CAB53337.1| mismatch repair protein msh6-1 [Arabidopsis thaliana]
gi|7268591|emb|CAB80700.1| G/T DNA mismatch repair enzyme [Arabidopsis thaliana]
gi|332656719|gb|AEE82119.1| DNA mismatch repair protein Msh6-1 [Arabidopsis thaliana]
Length = 1324
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 48/93 (51%), Positives = 63/93 (67%), Gaps = 3/93 (3%)
Query: 161 GAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQN 220
GA+D ++FL D DA RR P +Y+P+TLY+PP+F+KK T QWW K+++
Sbjct: 337 GARD--SEKFRFLGVDR-RDAKRRRPTDENYDPRTLYLPPDFVKKLTGGQRQWWEFKAKH 393
Query: 221 FDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
D V+FFK+GKFYELF MDA +GA EL YMK
Sbjct: 394 MDKVVFFKMGKFYELFEMDAHVGAKELDIQYMK 426
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 4/126 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA LE F++ + C F+THYH ++ + P V+ +M+ +
Sbjct: 1166 RGTATSDGQAIAESVLEHFIEKVQCRGFFSTHYHRLSVDYQTNPKVSLCHMACQIGEGIG 1225
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARH--NLRQLFIHK 506
G++ + FLY+L PG CPKS+G NVA LAG+P+ V++ + + EA + N R+ HK
Sbjct: 1226 GVEEVTFLYRLTPGACPKSYGVNVARLAGLPDYVLQRAVIKSQEFEALYGKNHRKT-DHK 1284
Query: 507 FASLVK 512
A+++K
Sbjct: 1285 LAAMIK 1290
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 274 TPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLR 333
TP P++S +KYF++AFD EA ++G +IP G D+EYD ++ E ++ +L+
Sbjct: 851 TPGQSLPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEEYDCACKTVEEFESSLKKHLK 910
Query: 334 TQCAHFG-CTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
Q G ++ Y K + Y+LEVP + +++ + + KK V Y TP +
Sbjct: 911 EQRKLLGDASINYVTVGKDE--YLLEVPESLSGSVPHDYE-LCSSKKGVSRYWTPTIK 965
>gi|336110058|gb|AEI16797.1| mutS protein 6 [Petrosaurus mearnsi]
Length = 361
Score = 102 bits (253), Expect = 7e-19, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 54/65 (83%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P+Y+P TL+VP ++L+ TP M +WW +KSQNFDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PEYDPSTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336110070|gb|AEI16803.1| mutS protein 6 [Sceloporus variabilis]
Length = 361
Score = 102 bits (253), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 54/65 (83%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P+Y+P TL+VP ++L+ TP M +WW +KSQNFDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PEYDPSTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336110082|gb|AEI16809.1| mutS protein 6 [Uta stansburiana]
Length = 361
Score = 101 bits (252), Expect = 8e-19, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 54/65 (83%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P+Y+P TL+VP ++L+ TP M +WW +KSQNFDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PEYDPSTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|449686518|ref|XP_002161963.2| PREDICTED: DNA mismatch repair protein Msh6-like, partial [Hydra
magnipapillata]
Length = 543
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 54/118 (45%), Positives = 70/118 (59%), Gaps = 5/118 (4%)
Query: 138 APSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLY 197
A S STP+ V TS G +D+ H FL +D +++ PDY+ +TLY
Sbjct: 16 ASSGQSTPAASV--TSAEVLDLEG-KDYLHLTLPFLKDGQRMDKNKKLHTDPDYDKRTLY 72
Query: 198 VPPEFL--KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
VP +L K+ +P M QWW +K FD V+FFKVGKFYEL+HMDAVIG EL +MK
Sbjct: 73 VPDSYLQSKEMSPGMKQWWLLKKDLFDTVIFFKVGKFYELYHMDAVIGVAELGLVFMK 130
>gi|340502546|gb|EGR29225.1| hypothetical protein IMG5_160240 [Ichthyophthirius multifiliis]
Length = 1077
Score = 101 bits (252), Expect = 9e-19, Method: Compositional matrix adjust.
Identities = 52/122 (42%), Positives = 73/122 (59%), Gaps = 5/122 (4%)
Query: 143 STPSF--PVSDTSETT---PSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLY 197
STP F V++TSE P + + + P++ D R HP+Y+P TLY
Sbjct: 156 STPKFGQKVTNTSENICEDPKKAAFEQLRDTTPLWALPENARDKQMRKKDHPNYDPTTLY 215
Query: 198 VPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGC 257
+PP+ KK T CM Q+WTIKS+NFD ++ FK+GKFYELF+ DA+I EL ++M +
Sbjct: 216 IPPDDFKKLTICMQQYWTIKSENFDKIVLFKLGKFYELFYEDALISNKELDLNWMGDKMH 275
Query: 258 TG 259
TG
Sbjct: 276 TG 277
Score = 55.8 bits (133), Expect = 6e-05, Method: Compositional matrix adjust.
Identities = 31/87 (35%), Positives = 47/87 (54%), Gaps = 4/87 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA + ++ + C +FATHYHS+ R + F +M+ D+
Sbjct: 984 RGTSTHDGYSIAYSIIRYIVEHMKCRCIFATHYHSLIDEFRLYYQIDFYHMACFVDQ--- 1040
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAEL 475
+ +VFLYKL +SF NVA++
Sbjct: 1041 NLGKVVFLYKLKKEEFQQSFAMNVAKV 1067
Score = 39.7 bits (91), Expect = 4.3, Method: Compositional matrix adjust.
Identities = 18/57 (31%), Positives = 35/57 (61%), Gaps = 4/57 (7%)
Query: 277 GCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLR 333
G P++++L+ F+N + K + PK G+ +E+DE + +K I++E++ YLR
Sbjct: 675 GKLPEIAQLIAQFDNIIEWK----SNKPYPKKGLLQEFDEAQENVKQIQQELENYLR 727
>gi|336109978|gb|AEI16757.1| mutS protein 6 [Saltuarius cornutus]
Length = 360
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 41/64 (64%), Positives = 51/64 (79%)
Query: 190 DYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELAC 249
DY+P TL+VP ++LK TP M WW +KSQNF+CV+FFKVGKFYEL+HMDAV+G EL
Sbjct: 2 DYDPGTLFVPEDYLKNCTPAMRXWWEMKSQNFNCVIFFKVGKFYELYHMDAVVGVKELGL 61
Query: 250 SYMK 253
+MK
Sbjct: 62 VFMK 65
>gi|336110066|gb|AEI16801.1| mutS protein 6 [Pristidactylus torquatus]
Length = 361
Score = 101 bits (252), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 54/65 (83%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P+Y+P TL+VP ++L+ TP M +WW +KSQNFDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PEYDPTTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336109972|gb|AEI16754.1| mutS protein 6 [Charina trivirgata]
Length = 360
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/67 (59%), Positives = 54/67 (80%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PBY+P TL+VP ++LK TP M +WW +KSQNFD V+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PBYDPSTLFVPEDYLKNCTPGMRKWWELKSQNFDAVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMKES 255
+MK S
Sbjct: 61 LVFMKGS 67
>gi|336109944|gb|AEI16740.1| mutS protein 6 [Anilius scytale]
Length = 361
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 53/65 (81%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++LK TP M +WW +KSQNFD V+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PDYDPXTLFVPEDYLKNCTPGMRKWWELKSQNFDAVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336109950|gb|AEI16743.1| mutS protein 6 [Boa constrictor]
Length = 361
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 53/65 (81%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++LK TP M +WW +KSQNFD V+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PDYDPSTLFVPEDYLKNCTPGMRKWWELKSQNFDAVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|196016559|ref|XP_002118131.1| hypothetical protein TRIADDRAFT_33687 [Trichoplax adhaerens]
gi|190579257|gb|EDV19356.1| hypothetical protein TRIADDRAFT_33687 [Trichoplax adhaerens]
Length = 984
Score = 101 bits (251), Expect = 1e-18, Method: Compositional matrix adjust.
Identities = 44/93 (47%), Positives = 61/93 (65%)
Query: 161 GAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQN 220
G ++ H +++ D+ R P+Y+ +TL++P FLK+QTP M QWW IKS+N
Sbjct: 1 GNDNYIHQGLKWMQDGFRKDSKGRLQSDPEYDSRTLWLPSGFLKEQTPLMRQWWQIKSEN 60
Query: 221 FDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
FD VL FKVGKFYE++HMDA+IG EL M+
Sbjct: 61 FDSVLCFKVGKFYEMYHMDALIGISELGLILMR 93
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYI---EDK 445
RGT T DG IA + +I C T+F+THYHS+ +PNV +M+ + ED
Sbjct: 866 RGTATYDGTAIAGAVVSHLAHEIKCRTLFSTHYHSLVEDFVSDPNVRLGHMACMVENEDD 925
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
+ +TI FLYK V G CPKS+GFN A LAG+P++V+
Sbjct: 926 DDPSKETITFLYKFVAGACPKSYGFNAARLAGLPDNVI 963
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 4/130 (3%)
Query: 260 ESTLLTQLCNYESQTPSGC---FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDE 316
+S LL Q+ Y + SG FP + E +++F+ AFDH++A G IIPK G D EYD+
Sbjct: 528 KSRLLLQIITYTGENFSGIKGKFPQLLEYIQFFQKAFDHEQAKKDGKIIPKPGADPEYDD 587
Query: 317 VMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVAT 376
+ I I++E++ YL +Q C I Q + +Y +EVP S+ N + +
Sbjct: 588 AIQSIAEIKQELEHYLDSQKKRLNCRNIRYWGQGRN-RYQIEVPESVLSRYTPNDYELRS 646
Query: 377 KKKNVENYVT 386
+KK + + T
Sbjct: 647 RKKGFKRFWT 656
>gi|336110030|gb|AEI16783.1| mutS protein 6 [Anolis carolinensis]
Length = 361
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 53/65 (81%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P T++VP ++LK TP M +WW +KSQ FDCVLF+KVGKFYEL+HMDAV+G +L
Sbjct: 1 PDYDPSTIFVPEDYLKNCTPGMRKWWELKSQYFDCVLFYKVGKFYELYHMDAVVGVSKLG 60
Query: 249 CSYMK 253
++MK
Sbjct: 61 LAFMK 65
>gi|336110020|gb|AEI16778.1| mutS protein 6 [Physignathus cocincinus]
Length = 361
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 53/65 (81%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++L+ TP M +WW +KSQ FDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PDYDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336110002|gb|AEI16769.1| mutS protein 6 [Chlamydosaurus kingii]
Length = 361
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 53/65 (81%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++L+ TP M +WW +KSQ FDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PDYDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336109996|gb|AEI16766.1| mutS protein 6 [Calotes emma]
Length = 361
Score = 100 bits (250), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 53/65 (81%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++L+ TP M +WW +KSQ FDCV+F+KVGKFYEL+HMDAVIG ++L
Sbjct: 1 PDYDPGTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVIGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336110016|gb|AEI16776.1| mutS protein 6 [Moloch horridus]
Length = 361
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 53/65 (81%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++L+ TP M +WW +KSQ FDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PDYDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336110010|gb|AEI16773.1| mutS protein 6 [Hydrosaurus sp. TMT-2011]
Length = 361
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 53/65 (81%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++L+ TP M +WW +KSQ FDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PDYDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336110024|gb|AEI16780.1| mutS protein 6 [Pogona vitticeps]
Length = 361
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 53/65 (81%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++L+ TP M +WW +KSQ FDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PDYDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336110012|gb|AEI16774.1| mutS protein 6 [Hypsilurus boydii]
Length = 361
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 53/65 (81%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++L+ TP M +WW +KSQ FDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PDYDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336110000|gb|AEI16768.1| mutS protein 6 [Chelosania brunnea]
Length = 361
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 53/65 (81%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++L+ TP M +WW +KSQ FDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PDYDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|334186287|ref|NP_001190656.1| DNA mismatch repair protein Msh6-1 [Arabidopsis thaliana]
gi|332656720|gb|AEE82120.1| DNA mismatch repair protein Msh6-1 [Arabidopsis thaliana]
Length = 1321
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 47/93 (50%), Positives = 63/93 (67%), Gaps = 6/93 (6%)
Query: 161 GAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQN 220
GA+D ++FL +DA RR P +Y+P+TLY+PP+F+KK T QWW K+++
Sbjct: 337 GARD--SEKFRFLG----VDAKRRRPTDENYDPRTLYLPPDFVKKLTGGQRQWWEFKAKH 390
Query: 221 FDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
D V+FFK+GKFYELF MDA +GA EL YMK
Sbjct: 391 MDKVVFFKMGKFYELFEMDAHVGAKELDIQYMK 423
Score = 90.9 bits (224), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 4/126 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA LE F++ + C F+THYH ++ + P V+ +M+ +
Sbjct: 1163 RGTATSDGQAIAESVLEHFIEKVQCRGFFSTHYHRLSVDYQTNPKVSLCHMACQIGEGIG 1222
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARH--NLRQLFIHK 506
G++ + FLY+L PG CPKS+G NVA LAG+P+ V++ + + EA + N R+ HK
Sbjct: 1223 GVEEVTFLYRLTPGACPKSYGVNVARLAGLPDYVLQRAVIKSQEFEALYGKNHRKT-DHK 1281
Query: 507 FASLVK 512
A+++K
Sbjct: 1282 LAAMIK 1287
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/118 (31%), Positives = 63/118 (53%), Gaps = 4/118 (3%)
Query: 274 TPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLR 333
TP P++S +KYF++AFD EA ++G +IP G D+EYD ++ E ++ +L+
Sbjct: 848 TPGQSLPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEEYDCACKTVEEFESSLKKHLK 907
Query: 334 TQCAHFG-CTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
Q G ++ Y K + Y+LEVP + +++ + + KK V Y TP +
Sbjct: 908 EQRKLLGDASINYVTVGKDE--YLLEVPESLSGSVPHDYE-LCSSKKGVSRYWTPTIK 962
>gi|336110006|gb|AEI16771.1| mutS protein 6 [Ctenophorus isolepis]
Length = 361
Score = 100 bits (249), Expect = 2e-18, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 53/65 (81%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++L+ TP M +WW +KSQ FDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PDYDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|115662656|ref|XP_783076.2| PREDICTED: DNA mismatch repair protein Msh6-like, partial
[Strongylocentrotus purpuratus]
Length = 568
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 41/87 (47%), Positives = 57/87 (65%)
Query: 167 HNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLF 226
H ++L P I D R+ + P+Y+ TL+VP F+ K TP M QWW +KS+ ++ VLF
Sbjct: 192 HQRQEWLKPGKIKDIKGRTEQDPEYDSSTLFVPKSFMDKTTPAMRQWWEMKSKYYNAVLF 251
Query: 227 FKVGKFYELFHMDAVIGADELACSYMK 253
FK+GKFYEL+HMDA + EL +MK
Sbjct: 252 FKMGKFYELYHMDAEVAVKELGLIFMK 278
>gi|336110008|gb|AEI16772.1| mutS protein 6 [Draco blanfordii]
Length = 361
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 52/65 (80%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++L+ TP M +WW +KSQ FDCV+F+KVGKFYEL+HMDAV+G +L
Sbjct: 1 PDYDPSTLFVPEDYLRNCTPGMRKWWXLKSQYFDCVIFYKVGKFYELYHMDAVVGVSKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336110074|gb|AEI16805.1| mutS protein 6 [Plica plica]
Length = 361
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 53/65 (81%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P+Y+ TL+VP ++L+ TP M +WW +KSQNFDCV+F+KVGKFYEL+HMDAVIG ++L
Sbjct: 1 PEYDSTTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVIGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336110036|gb|AEI16786.1| mutS protein 6 [Chalarodon madagascariensis]
Length = 361
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 54/65 (83%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P+Y+P TL+VP ++L+ TP M +WW +KSQ+FDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PEYDPTTLFVPEDYLRNCTPGMRKWWELKSQHFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|225437545|ref|XP_002275930.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Vitis vinifera]
Length = 1297
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 52/74 (70%)
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
DA RR P +Y+P+TLY+PP FLK T QWW KS++ D V+FFK+GKFYELF MD
Sbjct: 308 DAKRRCPGDANYDPRTLYLPPNFLKNLTGGQRQWWEFKSRHMDKVIFFKMGKFYELFEMD 367
Query: 240 AVIGADELACSYMK 253
A IGA EL YMK
Sbjct: 368 AHIGAKELDLQYMK 381
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA LE F+ ++ C +F+THYH +A ++ V+ +M+ K
Sbjct: 1123 RGTSTSDGQAIAESVLEHFVHKVRCRGMFSTHYHRLAVDYKKNSKVSLCHMACQVGKGVG 1182
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
G++ + FLY+L PG CPKS+G NVA LAG+P V++
Sbjct: 1183 GVEEVTFLYRLRPGACPKSYGVNVARLAGLPNSVLQ 1218
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 219 QNFDCVLFFKVGKFYELFHMDAVIGADEL---ACSYMKESGCTGESTLLTQLCNYESQTP 275
+N + V+F++ +L + + EL ACS + ES LL L TP
Sbjct: 754 RNANKVVFYEDAAKKQLQEFISALRGCELMTQACSSLGVILENVESGLLHHLL-----TP 808
Query: 276 SGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQ 335
PD+ ++ +F+ AFD EA+++G IIP GVDKEYD +K IE ++ +L+ Q
Sbjct: 809 GKGLPDIHSVINHFKEAFDWVEANNSGRIIPHEGVDKEYDSACKTVKEIELRLKKHLKEQ 868
Query: 336 CAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
G I K+ Y+LEVP +++ + + KK Y TP +
Sbjct: 869 QKLLGDASINFVTIGKE-AYLLEVPESLRGNIPRDYE-LRSSKKGFFRYWTPNIK 921
>gi|336110078|gb|AEI16807.1| mutS protein 6 [Uranoscodon superciliosus]
Length = 361
Score = 100 bits (248), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 53/65 (81%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P+Y+ TL+VP ++L+ TP M +WW +KSQNFDCV+F+KVGKFYEL+HMDAVIG ++L
Sbjct: 1 PEYDSTTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVIGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336109952|gb|AEI16744.1| mutS protein 6 [Coleonyx variegatus]
Length = 361
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 40/64 (62%), Positives = 51/64 (79%)
Query: 190 DYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELAC 249
DY+P TL+VP ++L TP M +WW +KSQNFDCV+F+KVGKFYEL+HMDAV+G EL
Sbjct: 2 DYDPGTLFVPADYLGNCTPGMRKWWEMKSQNFDCVIFYKVGKFYELYHMDAVVGVKELGL 61
Query: 250 SYMK 253
+MK
Sbjct: 62 VFMK 65
>gi|297743972|emb|CBI36942.3| unnamed protein product [Vitis vinifera]
Length = 1237
Score = 99.8 bits (247), Expect = 3e-18, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 52/74 (70%)
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
DA RR P +Y+P+TLY+PP FLK T QWW KS++ D V+FFK+GKFYELF MD
Sbjct: 278 DAKRRCPGDANYDPRTLYLPPNFLKNLTGGQRQWWEFKSRHMDKVIFFKMGKFYELFEMD 337
Query: 240 AVIGADELACSYMK 253
A IGA EL YMK
Sbjct: 338 AHIGAKELDLQYMK 351
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 61/96 (63%), Gaps = 1/96 (1%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA LE F+ ++ C +F+THYH +A ++ V+ +M+ K
Sbjct: 1063 RGTSTSDGQAIAESVLEHFVHKVRCRGMFSTHYHRLAVDYKKNSKVSLCHMACQVGKGVG 1122
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
G++ + FLY+L PG CPKS+G NVA LAG+P V++
Sbjct: 1123 GVEEVTFLYRLRPGACPKSYGVNVARLAGLPNSVLQ 1158
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/175 (30%), Positives = 83/175 (47%), Gaps = 10/175 (5%)
Query: 219 QNFDCVLFFKVGKFYELFHMDAVIGADEL---ACSYMKESGCTGESTLLTQLCNYESQTP 275
+N + V+F++ +L + + EL ACS + ES LL L TP
Sbjct: 694 RNANKVVFYEDAAKKQLQEFISALRGCELMTQACSSLGVILENVESGLLHHLL-----TP 748
Query: 276 SGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQ 335
PD+ ++ +F+ AFD EA+++G IIP GVDKEYD +K IE ++ +L+ Q
Sbjct: 749 GKGLPDIHSVINHFKEAFDWVEANNSGRIIPHEGVDKEYDSACKTVKEIELRLKKHLKEQ 808
Query: 336 CAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
G I K+ Y+LEVP +++ + + KK Y TP +
Sbjct: 809 QKLLGDASINFVTIGKE-AYLLEVPESLRGNIPRDYE-LRSSKKGFFRYWTPNIK 861
>gi|147861780|emb|CAN78918.1| hypothetical protein VITISV_032225 [Vitis vinifera]
Length = 1349
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 44/76 (57%), Positives = 53/76 (69%)
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
DA RR P +Y+P+TLY+PP FLK T QWW KS++ D V+FFK+GKFYELF MD
Sbjct: 316 DAKRRCPGDANYDPRTLYLPPNFLKNLTGGQRQWWEFKSRHMDKVIFFKMGKFYELFEMD 375
Query: 240 AVIGADELACSYMKES 255
A IGA EL YMK +
Sbjct: 376 AHIGAKELDLQYMKST 391
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 61/98 (62%), Gaps = 3/98 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA LE F+ ++ C +F+THYH +A ++ V+ +M+ K
Sbjct: 1176 RGTSTSDGQAIAESVLEHFVHKVRCRGMFSTHYHRLAVDYKKNSKVSLCHMACQVGKGVG 1235
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAG--IPEDVVK 484
G++ + FLY+L PG CPKS+G NVA LAG +P V++
Sbjct: 1236 GVEEVTFLYRLRPGACPKSYGVNVARLAGKELPNSVLQ 1273
Score = 63.2 bits (152), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 2/112 (1%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD+ ++ +F+ AFD EA+++G IIP GVDKEYD +K IE ++ +L+ Q
Sbjct: 844 LPDIHSVINHFKEAFDWVEANNSGRIIPHEGVDKEYDSACKTVKEIELRLKKHLKEQQKL 903
Query: 339 FGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
G I K+ Y+LEVP +++ + + KK Y TP +
Sbjct: 904 LGDASINFVTIGKE-AYLLEVPESLRGNIPRDYE-LRSSKKGFFRYWTPNIK 953
>gi|336110048|gb|AEI16792.1| mutS protein 6 [Leiocephalus barahonensis]
Length = 361
Score = 99.8 bits (247), Expect = 4e-18, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 54/65 (83%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P+Y+P TL+VP ++L+ TP M +WW +KSQ+FDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PEYDPSTLFVPEDYLRNCTPGMRKWWELKSQHFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336110052|gb|AEI16794.1| mutS protein 6 [Liolaemus bellii]
Length = 361
Score = 99.4 bits (246), Expect = 5e-18, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 54/65 (83%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P+Y+P TL+VP ++L+ TP M +WW +KSQ FDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PEYDPTTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
++MK
Sbjct: 61 LAFMK 65
>gi|336110026|gb|AEI16781.1| mutS protein 6 [Trapelus agilis]
Length = 358
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 52/65 (80%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++L TP M +WW +KSQ FDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PDYDPTTLFVPEDYLGNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336109994|gb|AEI16765.1| mutS protein 6 [Agama agama]
Length = 360
Score = 99.0 bits (245), Expect = 6e-18, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 52/65 (80%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++L TP M +WW +KSQ FDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PDYDPTTLFVPEDYLGNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336110018|gb|AEI16777.1| mutS protein 6 [Phrynocephalus mystaceus]
Length = 360
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 52/65 (80%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++L TP M +WW +KSQ FDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PDYDPTTLFVPEDYLGNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|297814117|ref|XP_002874942.1| hypothetical protein ARALYDRAFT_912022 [Arabidopsis lyrata subsp.
lyrata]
gi|297320779|gb|EFH51201.1| hypothetical protein ARALYDRAFT_912022 [Arabidopsis lyrata subsp.
lyrata]
Length = 1326
Score = 99.0 bits (245), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 45/84 (53%), Positives = 58/84 (69%), Gaps = 1/84 (1%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
++FL D DA RR +Y+P+TLY+PP+F+KK T QWW KS++ D V+FFK+
Sbjct: 346 FRFLGVDR-RDAKRRRSTDENYDPRTLYLPPDFVKKLTGGQRQWWEFKSKHMDKVVFFKM 404
Query: 230 GKFYELFHMDAVIGADELACSYMK 253
GKFYELF MDA +GA EL YMK
Sbjct: 405 GKFYELFEMDAHVGAKELDIQYMK 428
Score = 94.4 bits (233), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 47/125 (37%), Positives = 76/125 (60%), Gaps = 2/125 (1%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA LE F+ ++ C +F+THYH ++ + P V+ +M+ +
Sbjct: 1168 RGTATSDGQAIAESVLEHFIDKVQCRGLFSTHYHRLSVDYQTNPKVSLCHMACQVGEGIG 1227
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFI-HKF 507
G++ + FLY+L PG CPKS+G NVA LAG+P+ V++ + + EA + +Q HK
Sbjct: 1228 GVEEVTFLYRLTPGACPKSYGVNVARLAGLPDYVLQRAVIKSQEFEALYGKKQRTTDHKM 1287
Query: 508 ASLVK 512
A+++K
Sbjct: 1288 AAMIK 1292
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/141 (29%), Positives = 71/141 (50%), Gaps = 9/141 (6%)
Query: 248 ACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPK 307
ACS ++ +S L L +P P++S +KYF++AFD EA ++G +IP
Sbjct: 832 ACSSLRAILKHDKSRRLLHLL-----SPGQILPNISSSIKYFKDAFDWVEAHNSGRVIPH 886
Query: 308 AGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASK 366
G D+E+D ++ E ++ +L+ Q G ++ Y K + Y+LEVP +
Sbjct: 887 EGADEEFDCACKTVEEFESNLKKHLKEQRKLLGDPSINYVTVGKDE--YLLEVPEILSGS 944
Query: 367 AKSNHQRVATKKKNVENYVTP 387
+++ + + KK V Y TP
Sbjct: 945 VPHDYE-LCSSKKGVSRYWTP 964
>gi|49615726|gb|AAT67045.1| DNA mismatch repair protein [Petunia x hybrida]
Length = 1303
Score = 98.6 bits (244), Expect = 7e-18, Method: Compositional matrix adjust.
Identities = 43/74 (58%), Positives = 54/74 (72%)
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
D + RSP+ +Y+P+TLY+PP FLK T QWW KS++ D VLFFK+GKFYEL+ MD
Sbjct: 316 DVNGRSPEDANYDPRTLYLPPNFLKGLTGGQRQWWEFKSKHMDKVLFFKMGKFYELYEMD 375
Query: 240 AVIGADELACSYMK 253
A IGA+EL YMK
Sbjct: 376 AHIGANELHLQYMK 389
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 48/132 (36%), Positives = 79/132 (59%), Gaps = 8/132 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA LE F+ + C +F+THYH ++ +++ V+ +M K +
Sbjct: 1137 RGTSTSDGQAIAESVLEHFVHNVQCRGMFSTHYHRLSIDYQKDSRVSLCHMGCQVGKGSG 1196
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA--FQM-----EARHNLRQ 501
++ + FLY+L PG CPKS+G NVA LAG+P+DV++ + F+M +++ NL
Sbjct: 1197 DLEEVTFLYRLTPGACPKSYGVNVARLAGLPDDVLQKAAAKSEEFEMYGHIKQSKENLSG 1256
Query: 502 LFIHKFASLVKS 513
+ K A+LV++
Sbjct: 1257 NLMKKEAALVQN 1268
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 58/114 (50%), Gaps = 8/114 (7%)
Query: 248 ACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPK 307
ACS + +S LL Y TP PD+ LK+F++AFD EA++ G IIP
Sbjct: 800 ACSSLGVILENTDSKLL-----YHLLTPGKGLPDVDSFLKHFKDAFDWVEANNLGRIIPH 854
Query: 308 AGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVI-YSEAQKKQKKYVLEVP 360
GVD+EYD ++ +E ++ +L+ Q G + I Y K Y LEVP
Sbjct: 855 EGVDEEYDTACKQVHEVELKLSKHLKEQRKLLGDSSIDYVTVGKDA--YPLEVP 906
>gi|336110068|gb|AEI16802.1| mutS protein 6 [Sauromalus ater]
Length = 361
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 53/65 (81%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P+Y+P TL+VP ++L+ TP M +WW +KSQ FDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PEYDPTTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336110060|gb|AEI16798.1| mutS protein 6 [Phrynosoma platyrhinos]
Length = 360
Score = 98.6 bits (244), Expect = 8e-18, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 53/65 (81%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P+Y+P TL+VP ++L+ TP M +WW +KSQ FDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PEYDPTTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336110034|gb|AEI16785.1| mutS protein 6 [Brachylophus fasciatus]
Length = 361
Score = 98.6 bits (244), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 53/65 (81%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P+Y+P TL+VP ++L+ TP M +WW +KSQ FDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PEYDPTTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336110062|gb|AEI16799.1| mutS protein 6 [Phymaturus palluma]
Length = 361
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 53/65 (81%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P+Y+P TL+VP ++L+ TP M +WW +KSQ FDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PEYDPTTLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|357153628|ref|XP_003576514.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Brachypodium
distachyon]
Length = 1318
Score = 98.2 bits (243), Expect = 9e-18, Method: Compositional matrix adjust.
Identities = 46/84 (54%), Positives = 56/84 (66%), Gaps = 1/84 (1%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
++FL D DA R P HP Y+P+TL +PP+FL T QWW KSQ+ D VLFFK+
Sbjct: 333 FKFL-GDGRKDAKGRRPGHPAYDPRTLSLPPQFLANLTGGQRQWWEFKSQHMDKVLFFKM 391
Query: 230 GKFYELFHMDAVIGADELACSYMK 253
GKFYEL+ MDA +GA EL YMK
Sbjct: 392 GKFYELYEMDAHVGARELDLQYMK 415
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 5/150 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA LE + + CL +F+THYH +A +++ V+ +M+
Sbjct: 1151 RGTSTSDGQAIAASVLEYLVHHVQCLGLFSTHYHRLAVE-QQDIKVSLCHMACEVGMGEG 1209
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFI--HK 506
G++ + FLY+L G CPKS+G NVA LAGIP V++ + + EA + +Q F K
Sbjct: 1210 GLEEVTFLYRLTAGSCPKSYGVNVARLAGIPASVLQRANQKSNEFEANYG-KQHFATKDK 1268
Query: 507 FASLVKSGEKVDVEELQKALESVKSFESQT 536
F ++ +++L + +++ E Q
Sbjct: 1269 FVCALREDNFATIKDLFRVVKAGNHQEGQV 1298
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 77/170 (45%), Gaps = 11/170 (6%)
Query: 224 VLFFKVGKFYELFHMDAVIGADEL--ACSYMKESGCTGESTLLTQLCNYESQTPSGCFPD 281
VL+ V K A+ G ++ ACS ++ T S LL L +P PD
Sbjct: 788 VLYEDVSKRLLQQFTSALRGCQQMFQACSSVRMLTGTEGSCLLNDLL-----SPGKGLPD 842
Query: 282 MSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFG- 340
+S +L +F +AFD EA G IIP G D EYD I+ IE ++ YL+ Q
Sbjct: 843 VSSILDHFRDAFDWSEADHNGRIIPHEGCDPEYDATCSAIEEIESSLKEYLKEQRELLAD 902
Query: 341 CTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
+V Y + K Y++EV N++ +T KK Y TPE +
Sbjct: 903 SSVKYVDVGK--DTYLIEVSESLGGSVPRNYELQST-KKGFYRYWTPEVK 949
>gi|336109986|gb|AEI16761.1| mutS protein 6 [Trogonophis wiegmanni]
Length = 361
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 40/65 (61%), Positives = 52/65 (80%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++L+ TP M +WW IKSQ FD V+F+KVGKFYEL+HMDAVIG ++L
Sbjct: 1 PDYDPTTLFVPEDYLRDCTPGMRKWWEIKSQYFDSVIFYKVGKFYELYHMDAVIGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336110054|gb|AEI16795.1| mutS protein 6 [Morunasaurus annularis]
Length = 361
Score = 98.2 bits (243), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 53/65 (81%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P+Y+ TL+VP ++L+ TP M +WW +KSQNFDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PEYDLTTLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|449443325|ref|XP_004139430.1| PREDICTED: DNA mismatch repair protein MSH7-like [Cucumis sativus]
Length = 1095
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 55/78 (70%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
+++L+P + DA+RR P HP Y+ KTLY+PP+ LKK + Q+W +K Q D +LFFKV
Sbjct: 232 FEWLNPSQVRDANRRRPDHPLYDKKTLYIPPDVLKKMSASQKQYWNVKCQYMDILLFFKV 291
Query: 230 GKFYELFHMDAVIGADEL 247
GKFYEL+ DA IG EL
Sbjct: 292 GKFYELYEQDAEIGHKEL 309
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA ++ + C +FATHYH + + P+V ++M+ +D
Sbjct: 932 RGTSTFDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEFASHPHVMLQHMACTFKDHE- 990
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++FLY+L G CP+S+G VA +AGIP VV+ + + M+
Sbjct: 991 -----LIFLYRLRSGACPESYGLKVATMAGIPGRVVEAASRASQMMK 1032
>gi|449521080|ref|XP_004167559.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
MSH7-like [Cucumis sativus]
Length = 1095
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 41/78 (52%), Positives = 55/78 (70%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
+++L+P + DA+RR P HP Y+ KTLY+PP+ LKK + Q+W +K Q D +LFFKV
Sbjct: 232 FEWLNPSQVRDANRRRPDHPLYDXKTLYIPPDVLKKMSASQKQYWNVKCQYMDILLFFKV 291
Query: 230 GKFYELFHMDAVIGADEL 247
GKFYEL+ DA IG EL
Sbjct: 292 GKFYELYEQDAEIGHKEL 309
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA ++ + C +FATHYH + + P+V ++M+ +D
Sbjct: 932 RGTSTFDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEFASHPHVMLQHMACTFKDHE- 990
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++FLY+L G CP+S+G VA +AGIP VV+ + + M+
Sbjct: 991 -----LIFLYRLRSGACPESYGLKVATMAGIPGRVVEAASRASQMMK 1032
>gi|224128348|ref|XP_002320307.1| predicted protein [Populus trichocarpa]
gi|222861080|gb|EEE98622.1| predicted protein [Populus trichocarpa]
Length = 1288
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 44/74 (59%), Positives = 51/74 (68%)
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
DA RR P DY+P+TLY+P EF K T QWW KS++ D VLFFK+GKFYELF MD
Sbjct: 286 DAKRRRPGDVDYDPRTLYLPAEFAKSLTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMD 345
Query: 240 AVIGADELACSYMK 253
A +GA EL YMK
Sbjct: 346 AHVGAKELDLQYMK 359
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 68/113 (60%), Gaps = 5/113 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA LE F+ ++ C +F+THYH +A +++ V+ +MS +
Sbjct: 1123 RGTSTSDGQAIAESVLEHFVHKVQCRGMFSTHYHRLAVDYQKDSKVSLYHMS-CQVGNGV 1181
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA---RHN 498
G++ + FLY+L PG CPKS+G NVA LAG+P+ ++ + + EA RH
Sbjct: 1182 GVEEVTFLYRLRPGACPKSYGVNVARLAGLPDSILHNAAAKSREFEAVYGRHR 1234
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 42/125 (33%), Positives = 67/125 (53%), Gaps = 9/125 (7%)
Query: 261 STLLTQLCNYES------QTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEY 314
S+L L N ES TP PD+ +LK+F++AFD EA+++G IIP GVD EY
Sbjct: 772 SSLAVILENVESGRLHHLLTPGKGLPDILPILKHFKSAFDWVEANNSGRIIPHEGVDVEY 831
Query: 315 DEVMDEIKSIEKEIQTYLRTQCAHFG-CTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQR 373
D +++K +E + +L+ Q G ++ Y K+ Y+LEVP +++
Sbjct: 832 DSACEKVKEVESSLARHLKEQQKLLGDKSITYVTVGKEA--YLLEVPEHLRGSIPQDYEL 889
Query: 374 VATKK 378
++KK
Sbjct: 890 RSSKK 894
>gi|85683149|gb|ABC73550.1| CG7003 [Drosophila miranda]
Length = 322
Score = 97.8 bits (242), Expect = 1e-17, Method: Compositional matrix adjust.
Identities = 49/94 (52%), Positives = 61/94 (64%), Gaps = 2/94 (2%)
Query: 274 TPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLR 333
T G FPD+SE L+YF AFDH A+ G I P+ G+D EYD VMD I+ IEK ++TYL
Sbjct: 230 TSGGSFPDLSEELRYFATAFDHDAAAKTGVIAPQPGMDAEYDVVMDRIEEIEKRLKTYLV 289
Query: 334 TQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKA 367
Q HFGC V Y + K K+Y L+VP +A KA
Sbjct: 290 EQERHFGCRVTYFGSDK--KRYQLDVPESHAHKA 321
>gi|336110022|gb|AEI16779.1| mutS protein 6 [Physignathus lesueurii]
Length = 361
Score = 97.8 bits (242), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 52/65 (80%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+V ++L+ TP M +WW +KSQ FDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PDYDPSTLFVSEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|336109970|gb|AEI16753.1| mutS protein 6 [Typhlops jamaicensis]
Length = 361
Score = 97.4 bits (241), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 52/65 (80%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++LK TP M +WW +KSQ FD V+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PDYDPTTLFVPEDYLKNCTPGMRKWWELKSQYFDSVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|224119772|ref|XP_002331157.1| predicted protein [Populus trichocarpa]
gi|222873240|gb|EEF10371.1| predicted protein [Populus trichocarpa]
Length = 1107
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 44/82 (53%), Positives = 58/82 (70%)
Query: 166 SHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVL 225
S + +++L P I DA+RR P P Y+ KTLY+PP+ LKK + Q+WT+KSQ D +L
Sbjct: 225 STSKFEWLDPAQIRDANRRRPNDPLYDKKTLYLPPDALKKMSASQKQYWTVKSQYMDVLL 284
Query: 226 FFKVGKFYELFHMDAVIGADEL 247
FFKVGKFYEL+ +DA IG EL
Sbjct: 285 FFKVGKFYELYELDAEIGHKEL 306
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/105 (40%), Positives = 57/105 (54%), Gaps = 15/105 (14%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYM--------- 439
RGT T DG IA ++ I C +FATHYH + + P+V+ +YM
Sbjct: 932 RGTSTYDGYAIAYAVFRHLVEKINCRLLFATHYHPLTKEFASHPHVSLQYMACAFKSKPE 991
Query: 440 SYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
SY + R+ +VFLY+L G CP S+G VA +AGIPE VV+
Sbjct: 992 SYSKSDRD-----LVFLYRLASGACPGSYGLQVATMAGIPEHVVE 1031
>gi|336110038|gb|AEI16787.1| mutS protein 6 [Corytophanes cristatus]
Length = 357
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 52/65 (80%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P Y+P TL+VP ++L+ TP M +WW +KSQ FDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PXYDPATLFVPEDYLRNCTPGMRKWWELKSQYFDCVVFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|255548475|ref|XP_002515294.1| ATP binding protein, putative [Ricinus communis]
gi|223545774|gb|EEF47278.1| ATP binding protein, putative [Ricinus communis]
Length = 1306
Score = 97.1 bits (240), Expect = 2e-17, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 52/74 (70%)
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
DA R+ P DY+P+TLY+PP F+K + QWW KS++ D VLFFK+GKFYELF MD
Sbjct: 317 DAKRKRPGDADYDPRTLYLPPSFVKSLSGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMD 376
Query: 240 AVIGADELACSYMK 253
A +GA EL YMK
Sbjct: 377 AHVGAKELDLQYMK 390
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 41/133 (30%), Positives = 77/133 (57%), Gaps = 1/133 (0%)
Query: 353 KKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFL-QI 411
K +++ S + ++ +++ +N + RGT T+DG IA LE F+ ++
Sbjct: 1100 KDHIMAGQSTFLTELSETALMLSSATRNSLVTLDELGRGTSTSDGQAIAESVLEHFVHRV 1159
Query: 412 GCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFN 471
C +F+THYH ++ +++P V+ +M+ + ++ + FLY+L PG CPKS+G N
Sbjct: 1160 QCRGMFSTHYHRLSVDYQKDPKVSLCHMACQVGRGVGEVEEVTFLYRLTPGACPKSYGVN 1219
Query: 472 VAELAGIPEDVVK 484
VA LAG+P+ +++
Sbjct: 1220 VARLAGLPDPILQ 1232
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/150 (31%), Positives = 76/150 (50%), Gaps = 14/150 (9%)
Query: 248 ACSYMKESGCTGESTLLTQLCNYESQ------TPSGCFPDMSELLKYFENAFDHKEASSA 301
C M E C S+L L N ES+ TP P + +LK+F+ AFD EA+++
Sbjct: 794 GCELM-EQAC---SSLAVILENVESRQLHHLLTPGKSRPHIHSILKHFKEAFDWVEANNS 849
Query: 302 GNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFG-CTVIYSEAQKKQKKYVLEVP 360
G +IP GVD EYD ++++ IE + +L+ Q G +++Y K + Y+LEVP
Sbjct: 850 GRVIPHEGVDIEYDSACEKLRVIESSLTKHLKEQQKILGDKSIMYVTVGK--EAYLLEVP 907
Query: 361 SKYASKAKSNHQRVATKKKNVENYVTPECR 390
+ +++ + + KK Y TP +
Sbjct: 908 EHFRGSIPRDYE-LRSSKKGFYRYWTPSIK 936
>gi|339261468|ref|XP_003367889.1| DNA mismatch repair protein Msh6 [Trichinella spiralis]
gi|316964160|gb|EFV49402.1| DNA mismatch repair protein Msh6 [Trichinella spiralis]
Length = 352
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 5/100 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA TL+ IGC T+F+THYHS+ L P + +M+ + + ++
Sbjct: 223 RGTSTWDGTAIAHATLQYITNHIGCRTIFSTHYHSLMDSLAANPRIRLGHMACMVENESE 282
Query: 449 GID----TIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
G D +VFLYKL PG CPKS+GFN A+LAGI DV+K
Sbjct: 283 GADPTEENVVFLYKLAPGACPKSYGFNAAKLAGIHVDVIK 322
>gi|339248295|ref|XP_003375781.1| DNA mismatch repair protein Msh6 [Trichinella spiralis]
gi|316970814|gb|EFV54686.1| DNA mismatch repair protein Msh6 [Trichinella spiralis]
Length = 884
Score = 97.1 bits (240), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 48/100 (48%), Positives = 63/100 (63%), Gaps = 5/100 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA TL+ IGC T+F+THYHS+ L P + +M+ + + ++
Sbjct: 757 RGTSTWDGTAIAHATLQYITNHIGCRTIFSTHYHSLMDSLAANPRIRLGHMACMVENESE 816
Query: 449 GID----TIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
G D +VFLYKL PG CPKS+GFN A+LAGI DV+K
Sbjct: 817 GADPTEENVVFLYKLAPGACPKSYGFNAAKLAGIHVDVIK 856
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 39/65 (60%)
Query: 278 CFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCA 337
CFPD+ ++YF+NAFDH+ A + G+IIP+ GVD D I EK++ YL+T
Sbjct: 481 CFPDIQSDVQYFQNAFDHETAKTIGSIIPEEGVDPALDAANQAIVHAEKQLDNYLKTIQK 540
Query: 338 HFGCT 342
C+
Sbjct: 541 RLNCS 545
Score = 44.7 bits (104), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 18/27 (66%), Positives = 21/27 (77%)
Query: 227 FKVGKFYELFHMDAVIGADELACSYMK 253
F VGKFYEL+HMDAV+G L S+MK
Sbjct: 43 FPVGKFYELYHMDAVVGVKNLNLSFMK 69
>gi|336109992|gb|AEI16764.1| mutS protein 6 [Acanthosaura lepidogaster]
Length = 361
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 52/65 (80%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++L+ TP M +WW +KSQ FD V+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PDYDPSTLFVPEDYLRNCTPGMRKWWELKSQYFDSVIFYKVGKFYELYHMDAVVGVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|414885370|tpg|DAA61384.1| TPA: hypothetical protein ZEAMMB73_756272 [Zea mays]
gi|414885371|tpg|DAA61385.1| TPA: hypothetical protein ZEAMMB73_756272 [Zea mays]
Length = 762
Score = 96.7 bits (239), Expect = 3e-17, Method: Compositional matrix adjust.
Identities = 47/102 (46%), Positives = 62/102 (60%), Gaps = 4/102 (3%)
Query: 155 TTPSTSGAQDWSHN---HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMG 211
T P+ A+ + ++FL DA R P +P ++P+TL +PP+FLK T
Sbjct: 302 TAPTGDAAERFGQRDAEKFKFLGEGRK-DAKGRRPGNPGFDPRTLLLPPQFLKNLTGGQR 360
Query: 212 QWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
QWW KSQ+ D VLFFK+GKFYELF MDA +GA +L YMK
Sbjct: 361 QWWEFKSQHMDKVLFFKMGKFYELFEMDAHVGAKDLDLQYMK 402
>gi|336109964|gb|AEI16750.1| mutS protein 6 [Phelsuma lineata]
Length = 360
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/64 (60%), Positives = 51/64 (79%)
Query: 190 DYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELAC 249
DY+P TL+VP ++LK TP M +WW +KS+NFD V+F+KVGKFYEL+HMDAV+G EL
Sbjct: 1 DYDPGTLFVPEDYLKNCTPGMRKWWEMKSRNFDTVIFYKVGKFYELYHMDAVVGVKELGL 60
Query: 250 SYMK 253
+MK
Sbjct: 61 VFMK 64
>gi|336109960|gb|AEI16748.1| mutS protein 6 [Dibamus novaeguineae]
Length = 362
Score = 96.3 bits (238), Expect = 4e-17, Method: Compositional matrix adjust.
Identities = 39/65 (60%), Positives = 51/65 (78%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+ T++V +FLK TP M +WW +KSQN+D V+F+KVGKFYEL+HMDAVIG +EL
Sbjct: 1 PDYDSSTVFVSEDFLKNCTPGMRKWWELKSQNYDSVIFYKVGKFYELYHMDAVIGVNELG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|145348063|ref|XP_001418476.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144578705|gb|ABO96769.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 1113
Score = 96.3 bits (238), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 43/93 (46%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQ---------TPCMGQWWTIKSQN 220
+ F+ P+ I DAD R P PDY+P TL +P F K + +P QWW K+ N
Sbjct: 120 FPFMQPEKIKDADGRRPDDPDYDPSTLLLPSTFPKMRDASGVQWTVSPGQAQWWKFKAAN 179
Query: 221 FDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
FD VL FK+GKFYE+F MDA IG +L YM+
Sbjct: 180 FDSVLLFKMGKFYEMFEMDAHIGVRDLGLMYMR 212
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/112 (39%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRND 448
RGT T DG IA + C T+F+THYH +A +P+VA +M+ +E
Sbjct: 954 RGTATADGTAIACAVASHLIDKRCRTLFSTHYHRLADDHARDPHVALAHMACRVETPSGA 1013
Query: 449 GIDT-----IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
G++T + FLY L G CP+S+G NVA LAG+PE V A +EA
Sbjct: 1014 GVETLGRETVTFLYTLASGNCPRSYGVNVARLAGLPESVCLAAARRAAHLEA 1065
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 32/109 (29%), Positives = 53/109 (48%), Gaps = 7/109 (6%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD+S L E+AFD A S+G I P GVD + D +++ + + ++ ++L
Sbjct: 643 MPDLSAL-DEMESAFDWNAAKSSGRIEPAQGVDADLDAAEEQLTAADADLASWLEEARGE 701
Query: 339 FG---CTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENY 384
G V + A K +++EVP + ASK +H K+K E +
Sbjct: 702 LGGHKTEVCFVNANK--DTHLVEVPDRLASKVP-HHWVREGKRKGYERF 747
>gi|2104549|gb|AAB57798.1| AGAA.3 [Arabidopsis thaliana]
Length = 1362
Score = 95.9 bits (237), Expect = 5e-17, Method: Compositional matrix adjust.
Identities = 48/101 (47%), Positives = 64/101 (63%), Gaps = 11/101 (10%)
Query: 161 GAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPC--------MGQ 212
GA+D ++FL D DA RR P +Y+P+TLY+PP+F+KK T + Q
Sbjct: 342 GARD--SEKFRFLGVDR-RDAKRRRPTDENYDPRTLYLPPDFVKKLTGGQVRRAHGNLRQ 398
Query: 213 WWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
WW K+++ D V+FFK+GKFYELF MDA +GA EL YMK
Sbjct: 399 WWEFKAKHMDKVVFFKMGKFYELFEMDAHVGAKELDIQYMK 439
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 48/126 (38%), Positives = 76/126 (60%), Gaps = 4/126 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA LE F++ + C F+THYH ++ + P V+ +M+ +
Sbjct: 1204 RGTATSDGQAIAESVLEHFIEKVQCRGFFSTHYHRLSVDYQTNPKVSLCHMACQIGEGIG 1263
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARH--NLRQLFIHK 506
G++ + FLY+L PG CPKS+G NVA LAG+P+ V++ + + EA + N R+ HK
Sbjct: 1264 GVEEVTFLYRLTPGACPKSYGVNVARLAGLPDYVLQRAVIKSQEFEALYGKNHRKT-DHK 1322
Query: 507 FASLVK 512
A+++K
Sbjct: 1323 LAAMIK 1328
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/117 (30%), Positives = 62/117 (52%), Gaps = 4/117 (3%)
Query: 275 PSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRT 334
P P++S +KYF++AFD EA ++G +IP G D+EYD ++ E ++ +L+
Sbjct: 890 PGQSLPNISSSIKYFKDAFDWVEAHNSGRVIPHEGADEEYDCACKTVEEFESSLKKHLKE 949
Query: 335 QCAHFG-CTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
Q G ++ Y K + Y+LEVP + +++ + + KK V Y TP +
Sbjct: 950 QRKLLGDASINYVTVGKDE--YLLEVPESLSGSVPHDYE-LCSSKKGVSRYWTPTIK 1003
>gi|336110014|gb|AEI16775.1| mutS protein 6 [Leiolepis belliana]
Length = 361
Score = 95.1 bits (235), Expect = 8e-17, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 51/65 (78%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P TL+VP ++L+ TP M +WW +KSQ FD V+F+KVGKFYEL+HMDAV+G +L
Sbjct: 1 PDYDPTTLFVPEDYLRNCTPGMRKWWELKSQYFDGVIFYKVGKFYELYHMDAVVGVKKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|326498831|dbj|BAK02401.1| predicted protein [Hordeum vulgare subsp. vulgare]
Length = 1331
Score = 95.1 bits (235), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 41/74 (55%), Positives = 51/74 (68%)
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
DA + P P Y+P+TL++PP+FLK T QWW KSQ+ D VLFFK+GKFYEL+ MD
Sbjct: 357 DAKGKRPGDPAYDPRTLFLPPQFLKNLTGGQRQWWEFKSQHMDKVLFFKMGKFYELYEMD 416
Query: 240 AVIGADELACSYMK 253
A +G EL YMK
Sbjct: 417 AHVGTKELNLQYMK 430
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 43/113 (38%), Positives = 65/113 (57%), Gaps = 2/113 (1%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA L+ + ++ CL +F+THYH +A E+ V+ +M+
Sbjct: 1165 RGTSTSDGQAIAASVLDYLVHRVQCLGLFSTHYHKLAVE-HEDGKVSLCHMACQVGTGEG 1223
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
G++ + FLY+L G CPKS+G NVA LAGIP V++ + EA + R+
Sbjct: 1224 GLEEVTFLYRLTAGSCPKSYGVNVARLAGIPASVLQRANEKSIDFEANYGKRR 1276
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 62/188 (32%), Positives = 84/188 (44%), Gaps = 21/188 (11%)
Query: 248 ACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPK 307
ACS ++ T S+LL L +P PD+S +L YF +AFD EA G IIP
Sbjct: 828 ACSSIRALTGTEGSSLLNDLL-----SPGKGLPDVSSILDYFRDAFDWSEADHNGRIIPL 882
Query: 308 AGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHF-GCTVIYSEAQKKQKKYVLEVPSKYASK 366
G D EYD I+ IE +Q YL+ Q +V Y K Y++EV
Sbjct: 883 EGCDPEYDATSCAIEEIESNLQDYLKEQRKLLRDSSVKYVNVGKDT--YLIEVSDSLRGS 940
Query: 367 AKSNHQRVATKKKNVENYVTPECR------GTGTNDGCVIARVTLEKFLQIGCLTVFATH 420
S+++ +T KK V Y TPE + D I + L+K + + F H
Sbjct: 941 VPSDYELQST-KKGVCRYWTPEVKQLISELSKVATDKESILKGILQKLIHL-----FIEH 994
Query: 421 YHSVARRL 428
HS RRL
Sbjct: 995 -HSKWRRL 1001
>gi|51091506|dbj|BAD36244.1| putative mismatch binding protein Mus3 [Oryza sativa Japonica
Group]
gi|51091562|dbj|BAD36299.1| putative mismatch binding protein Mus3 [Oryza sativa Japonica
Group]
Length = 1253
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 51/74 (68%)
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
DA R P +P+Y+P+TL +P +FL T QWW KSQ+ D VLFFK+GKFYELF MD
Sbjct: 282 DAKGRRPGNPNYDPRTLSLPSQFLNSLTGGQRQWWEFKSQHMDKVLFFKMGKFYELFEMD 341
Query: 240 AVIGADELACSYMK 253
A +GA EL YMK
Sbjct: 342 AHVGAKELDLQYMK 355
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA LE + + CL +F+THYH +A ++ V+ +M+ K
Sbjct: 1087 RGTSTSDGQAIAASVLEYLVHHVQCLGLFSTHYHRLAAE-NKDSKVSLCHMACEISKGEG 1145
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR 500
G++ + FLYKL PG CPKS+G NVA LAGIP V++ + EA + R
Sbjct: 1146 GLEEVTFLYKLTPGSCPKSYGVNVARLAGIPASVLQRANEKSSDFEASYGKR 1197
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
P +S +L +F +AFD EA G IIP G D +YD I+ IE +Q YL+ Q
Sbjct: 776 LPHVSSILDHFRDAFDWSEADRNGRIIPHEGCDPQYDAACIAIEEIESSLQKYLKEQRKL 835
Query: 339 FG-CTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRGTGTNDG 397
+V Y + K Y+LEV N++ +T KK Y TPE + +
Sbjct: 836 LSDSSVKYVDVGK--DTYLLEVSENLRGSVPHNYELQST-KKGFYRYWTPEVKELISE-- 890
Query: 398 CVIARVTLEKFLQIGCLT-----VFATHYHSVARRL 428
+++ EK ++ C+ +F H HS R+L
Sbjct: 891 --LSKAEAEKEAKLKCILQNLIQLFVEH-HSKWRQL 923
>gi|397581604|gb|EJK51986.1| hypothetical protein THAOC_28787, partial [Thalassiosira oceanica]
Length = 1721
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 46/107 (42%), Positives = 67/107 (62%), Gaps = 2/107 (1%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIG-CLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA T++ ++ CLT+FATHYHS+ ++EP++ +M ++D +
Sbjct: 1555 RGTSTFDGTAIASATVKHLVEKNQCLTLFATHYHSLLEDWKDEPSIRLGHMECVVDDGDS 1614
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ + I FLY L G CPKSFG NVA LAG+P DV++ ++ Q E
Sbjct: 1615 ENTNNITFLYTLGEGACPKSFGVNVARLAGLPSDVLQKAKIISEQFE 1661
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 59/183 (32%), Positives = 87/183 (47%), Gaps = 14/183 (7%)
Query: 80 KAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAP 139
KA +E + S + + V+ T S++ + K+ + +S + +PT+ P A
Sbjct: 489 KASTATELDFSQFISQSPKEVDGKTQSATRVGSSAKKSTTLKSDNSVTKKPTQLPGKEAA 548
Query: 140 STPSTPSFPVSDTSETTPSTSG----AQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKT 195
S S PV+ +E +G A HNH +F + D R S HP+++ +T
Sbjct: 549 SARS----PVAQRAEIPKPVAGMVNPAGTHMHNHLKFFTTNR-RDLQRNSAGHPNFSTRT 603
Query: 196 LYVPPEFL-----KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
L++ L K T QWW IKSQ D VL FK GKFYE+FH D+ +G L
Sbjct: 604 LHIDWTELERVNGKAATAAQKQWWEIKSQYADTVLLFKTGKFYEMFHDDSDVGVAHLGMV 663
Query: 251 YMK 253
YMK
Sbjct: 664 YMK 666
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 62/112 (55%), Gaps = 9/112 (8%)
Query: 228 KVGKFYELFHMDAVIGADELACSYMKESGCTGESTLLTQLCNYESQTPSGCFP-DMSELL 286
KVG F +L ++ + A E+ + + ES +L ++ ++ GCFP M E L
Sbjct: 1177 KVGDFSKL--LNGLKAASEIPSLF---ANTEVESPMLAKIV--KTTEDGGCFPAQMREKL 1229
Query: 287 KYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
YF + FD K+A+ G+ P G+D+ YD V++EI SI+ +++ + C++
Sbjct: 1230 DYFFDNFDVKKAAK-GDFEPSRGMDEVYDRVLEEIDSIKHQLEQFRDEMCSN 1280
>gi|356572787|ref|XP_003554547.1| PREDICTED: DNA mismatch repair protein Msh6-1-like [Glycine max]
Length = 1269
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 43/83 (51%), Positives = 56/83 (67%), Gaps = 1/83 (1%)
Query: 171 QFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVG 230
+FL D DA RR P +Y+ +T+Y+PP+FL+ + QWW KS++ D VLFFK+G
Sbjct: 292 RFLKEDR-RDAKRRRPGDENYDSRTIYLPPDFLRSLSDGQKQWWEFKSKHMDKVLFFKMG 350
Query: 231 KFYELFHMDAVIGADELACSYMK 253
KFYELF MDA +GA EL YMK
Sbjct: 351 KFYELFEMDAHVGAKELDLQYMK 373
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 64/110 (58%), Gaps = 1/110 (0%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA LE ++ + C +F+THYH +A ++P V +M+
Sbjct: 1105 RGTATSDGQAIAESVLEHLVRKVQCRGLFSTHYHRLAVDYLKDPKVCLCHMACQVGSGIA 1164
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
G+D + FLY+L PG CPKS+G NVA +AG+P V++ + + EA +
Sbjct: 1165 GLDEVTFLYRLTPGACPKSYGVNVARIAGLPTSVLQKAAAKSREFEATYG 1214
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/117 (31%), Positives = 62/117 (52%), Gaps = 2/117 (1%)
Query: 274 TPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLR 333
TP PD+ L +F++AFD EA+++G IIP+ GVD EYD +K IE + +L+
Sbjct: 789 TPGKVLPDVCMDLNHFKDAFDWVEANNSGRIIPREGVDTEYDSACKAVKEIESSLLKHLK 848
Query: 334 TQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
Q G T I + + Y+LEVP + +++ + + +K Y +P+ +
Sbjct: 849 EQMKLLGSTSI-TYVNVGKDTYLLEVPENLSKNIPRDYE-LRSSRKGFFRYWSPDIK 903
>gi|125605646|gb|EAZ44682.1| hypothetical protein OsJ_29308 [Oryza sativa Japonica Group]
Length = 1293
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/74 (56%), Positives = 51/74 (68%)
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
DA R P +P+Y+P+TL +P +FL T QWW KSQ+ D VLFFK+GKFYELF MD
Sbjct: 322 DAKGRRPGNPNYDPRTLSLPSQFLNSLTGGQRQWWEFKSQHMDKVLFFKMGKFYELFEMD 381
Query: 240 AVIGADELACSYMK 253
A +GA EL YMK
Sbjct: 382 AHVGAKELDLQYMK 395
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 65/112 (58%), Gaps = 2/112 (1%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA LE + + CL +F+THYH +A ++ V+ +M+ K
Sbjct: 1127 RGTSTSDGQAIAASVLEYLVHHVQCLGLFSTHYHRLAAE-NKDSKVSLCHMACEISKGEG 1185
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR 500
G++ + FLYKL PG CPKS+G NVA LAGIP V++ + EA + R
Sbjct: 1186 GLEEVTFLYKLTPGSCPKSYGVNVARLAGIPASVLQRANEKSSDFEASYGKR 1237
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 48/156 (30%), Positives = 72/156 (46%), Gaps = 14/156 (8%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
P +S +L +F +AFD EA G IIP G D +YD I+ IE +Q YL+ Q
Sbjct: 816 LPHVSSILDHFRDAFDWSEADRNGRIIPHEGCDPQYDAACIAIEEIESSLQKYLKEQRKL 875
Query: 339 FG-CTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRGTGTNDG 397
+V Y + K Y+LEV N++ +T KK Y TPE + +
Sbjct: 876 LSDSSVKYVDVGKDT--YLLEVSENLRGSVPHNYELQST-KKGFYRYWTPEVKELISE-- 930
Query: 398 CVIARVTLEKFLQIGCLT-----VFATHYHSVARRL 428
+++ EK ++ C+ +F H HS R+L
Sbjct: 931 --LSKAEAEKEAKLKCILQNLIQLFVEH-HSKWRQL 963
>gi|336110004|gb|AEI16770.1| mutS protein 6 [Ctenophorus adelaidensis]
Length = 360
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 36/64 (56%), Positives = 51/64 (79%)
Query: 190 DYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELAC 249
+Y+P TL+VP ++L+ TP M +WW +K Q FDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 EYDPSTLFVPEDYLRNCTPGMRKWWELKGQYFDCVIFYKVGKFYELYHMDAVVGVNKLGL 60
Query: 250 SYMK 253
+MK
Sbjct: 61 VFMK 64
>gi|308805174|ref|XP_003079899.1| putative mismatch binding protein Mus3 (ISS) [Ostreococcus tauri]
gi|116058356|emb|CAL53545.1| putative mismatch binding protein Mus3 (ISS) [Ostreococcus tauri]
Length = 742
Score = 94.7 bits (234), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 42/93 (45%), Positives = 55/93 (59%), Gaps = 9/93 (9%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQ---------TPCMGQWWTIKSQN 220
+ FL P++I DA R P PDY+P +L +P F K + +P QWW K+ N
Sbjct: 180 FTFLQPENIKDAKGRRPSDPDYDPSSLLLPSTFPKLRDANGQPWTVSPGQAQWWRFKAAN 239
Query: 221 FDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
FD VL FK+GKFYE+F MDA IG +L YM+
Sbjct: 240 FDSVLLFKMGKFYEMFEMDAHIGVRDLGLMYMR 272
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 58/104 (55%), Gaps = 10/104 (9%)
Query: 398 CVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRNDGID----- 451
C +A +E+ C T+F+THYH +A +PNVA +M+ +E + G D
Sbjct: 585 CAVASHLIERR----CRTLFSTHYHRLADDHARDPNVALAHMACRVETPSDAGADAYGRE 640
Query: 452 TIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
T+ FLY L G CP+S+G NVA LAG+PE V A ++EA
Sbjct: 641 TVTFLYTLASGNCPRSYGVNVARLAGLPESVCLAAARRASRLEA 684
>gi|390334252|ref|XP_797647.3| PREDICTED: DNA mismatch repair protein Msh6-like
[Strongylocentrotus purpuratus]
Length = 1462
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 40/87 (45%), Positives = 55/87 (63%)
Query: 167 HNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLF 226
H ++L P D R + P+Y+ TL+VP F+ K TP M QWW +KS+ ++ VLF
Sbjct: 405 HQRQEWLKPGKRKDIKGRPEQDPEYDSSTLFVPKSFMDKTTPAMRQWWEMKSKYYNAVLF 464
Query: 227 FKVGKFYELFHMDAVIGADELACSYMK 253
FK+GKFYEL+HMDA + EL +MK
Sbjct: 465 FKMGKFYELYHMDAEVAVKELGLIFMK 491
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 49/144 (34%), Positives = 77/144 (53%), Gaps = 5/144 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI-GCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA +++ ++ GC T+F+THYHS+ +PN+ +M+ + + N+
Sbjct: 1320 RGTATYDGTAIATAVVKELSEVVGCRTLFSTHYHSLVEEFSHDPNIRLGHMACMVENENE 1379
Query: 449 ---GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIH 505
+TI FLYK V G CPKS+GFN A LA IP++++ A E R F
Sbjct: 1380 EDPSQETITFLYKFVGGACPKSYGFNAARLADIPDEIILVARQKAKHFEESAE-RMKFFR 1438
Query: 506 KFASLVKSGEKVDVEELQKALESV 529
+ + +DV +L++ + V
Sbjct: 1439 SVHKMCGASSGLDVCKLKQIVARV 1462
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/129 (31%), Positives = 65/129 (50%), Gaps = 3/129 (2%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+S+LL + +S G +PD ++ L++FE AFD K+A G IIP GV EYD +
Sbjct: 979 KSSLLKACISLKSTGCRGKYPDYADTLEFFETAFDQKKAKEKGAIIPCKGVIPEYDNAIS 1038
Query: 320 EIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+I + +Q YL Q GC ++Y K ++ +E+P S+ + + K
Sbjct: 1039 DIADTKDRLQEYLDKQKKRLGCRNIVYWGTAK--NRFQMEIPESALSRHIPEEYELTSSK 1096
Query: 379 KNVENYVTP 387
K + Y +P
Sbjct: 1097 KGFKRYWSP 1105
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 35/112 (31%), Positives = 48/112 (42%), Gaps = 19/112 (16%)
Query: 261 STLLTQLCNYESQTPSGCFPDMSELLKYFE--NAFDHKEASSAGNIIPKAGVDKEYDEVM 318
S LT L +ES +++K F+ AFD K+A G IIP GV EYD +
Sbjct: 846 SDFLTALDGFESGL---------KIVKLFKKSTAFDQKKAKEKGAIIPCKGVIPEYDNAI 896
Query: 319 DEIKSIEKEIQTYLRTQCAHFGC--------TVIYSEAQKKQKKYVLEVPSK 362
+I + +Q YL Q GC IY A K + + +P K
Sbjct: 897 SDIADTKDRLQEYLDKQKKRLGCRGVIPEYDNAIYDMADTKDRHLMGVIPDK 948
>gi|255084495|ref|XP_002508822.1| predicted protein [Micromonas sp. RCC299]
gi|226524099|gb|ACO70080.1| predicted protein [Micromonas sp. RCC299]
Length = 1419
Score = 94.4 bits (233), Expect = 1e-16, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 80/171 (46%), Gaps = 32/171 (18%)
Query: 114 PMKNGNKRGLSSKSGQPTKKPKLTA--------------PSTPSTPSFPVSDTSETTPST 159
P G + G SK QP KK T PS+ S + SE +
Sbjct: 322 PGPKGKRGGAKSKPAQPAKKTVTTVTPPKKATPKKAKNPPSSSGGKSLAAA-LSEPVLAP 380
Query: 160 SGAQDWSHNHYQ--------FLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQ----- 206
+G+ + + HY+ +L PD DA R P P+Y+P TL +P F K +
Sbjct: 381 TGSPELNPAHYEARERLMFPWLQPDKRRDASGRRPSDPEYDPTTLQLPGAFPKCKDATGK 440
Query: 207 ----TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
+P QWW K+ +FD V+ FK+GKFYELF MDA +GA +L YMK
Sbjct: 441 PFTVSPGQAQWWRFKAAHFDSVIMFKMGKFYELFEMDAHVGAADLGLQYMK 491
Score = 92.0 bits (227), Expect = 7e-16, Method: Compositional matrix adjust.
Identities = 54/157 (34%), Positives = 80/157 (50%), Gaps = 6/157 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND- 448
RGT T+DG IA + + +G T+F+THYH +A + V +M D R +
Sbjct: 1261 RGTSTSDGAAIASAVSDHLVDLGARTMFSTHYHRLADDRANDARVRLGHMGC--DVRGET 1318
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF--IHK 506
G + + FLYKL G CP+S+G NVA LAG+PEDVV+ + +ME N R + +
Sbjct: 1319 GAEEVTFLYKLTQGSCPRSYGVNVARLAGLPEDVVQAAAKASKEMEEAMNARAVMRAVQA 1378
Query: 507 FASLVKSGEKV-DVEELQKALESVKSFESQTKKDLED 542
+ E+ DV L A E + + K +E+
Sbjct: 1379 VRDAMDEFERTEDVSVLIAAQERARRVLAHVKDPVEE 1415
Score = 38.9 bits (89), Expect = 8.5, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 54/112 (48%), Gaps = 2/112 (1%)
Query: 280 PDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYL-RTQCAH 338
P++SE L +FE AFD +A +G I PK G D+ D D + + ++ ++ +L T+
Sbjct: 948 PELSERLAFFERAFDWDKARESGRIEPKPGADEAVDAADDRVCAADEALREWLVGTRKKL 1007
Query: 339 FGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
G + + ++ EV A K ++ R K+K E + PE +
Sbjct: 1008 GGSKQDVNLVSANKDTHLCEVSDALAGKVPADWSREG-KRKGFEKFDCPELK 1058
>gi|297835538|ref|XP_002885651.1| hypothetical protein ARALYDRAFT_479958 [Arabidopsis lyrata subsp.
lyrata]
gi|297331491|gb|EFH61910.1| hypothetical protein ARALYDRAFT_479958 [Arabidopsis lyrata subsp.
lyrata]
Length = 1119
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 55/78 (70%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
+++L P I DA+RR P P Y+ KTLY+PP+ KK + Q+W++KS+ D VLFFKV
Sbjct: 225 FEWLEPSRIRDANRRRPDDPLYDRKTLYIPPDVFKKMSASQKQYWSVKSEYMDIVLFFKV 284
Query: 230 GKFYELFHMDAVIGADEL 247
GKFYEL+ +DA +G EL
Sbjct: 285 GKFYELYEVDAELGHKEL 302
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA ++ + C +FATHYH + + P V ++M+ ++D
Sbjct: 946 RGTSTFDGYAIAYSVFRHLVEKVQCRMLFATHYHPLTKEFASHPRVTSKHMACAFKSKSD 1005
Query: 449 ----GIDT-IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
G D +VFLY+L G CP+S+G VA +AGIP VV+ + A M+
Sbjct: 1006 QAPRGCDQDLVFLYRLTEGACPESYGLQVALMAGIPNQVVETASDAAQAMK 1056
>gi|336109974|gb|AEI16755.1| mutS protein 6 [Pholidobolus macbrydei]
Length = 361
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 51/65 (78%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+ T++VP ++L+ TP M +WW +KSQNFD V+F+KVGKFYEL+HMDAV+G +L
Sbjct: 1 PDYDSSTVFVPEDYLQNCTPGMRKWWELKSQNFDAVIFYKVGKFYELYHMDAVVGVSKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LVFMK 65
>gi|320035900|gb|EFW17840.1| DNA mismatch repair protein msh6 [Coccidioides posadasii str.
Silveira]
Length = 1204
Score = 94.0 bits (232), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 109/240 (45%), Gaps = 21/240 (8%)
Query: 17 SSTPASSKGKKTSKSPAKSEDDSPVTKRPRRKSA------KRVKSAIQSDSE---PDDML 67
S+TP S + KKT EDD V K P RKSA KR AI D E PDD +
Sbjct: 122 SATP-SRRAKKTVDYWESDEDD--VVKPPTRKSAVGRANKKRRTVAISEDEEEFQPDDNI 178
Query: 68 QDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPT----PSSSEAEVTPMKNGNKRGL 123
D D+++ P ES+ E + S PT P S+ + +
Sbjct: 179 GDFDDLDDFIVPD---ESDQEMRPSRKRKRSSNPKPTKPSTPISAPQDDMDVDLDIPDSA 235
Query: 124 SSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADR 183
S + + T P T T P+S S Y +L +ILD D+
Sbjct: 236 SGTAKKWTYDPNDTECRQHRTTLAPLSSKSLGKKKEKAHLTEPEKRYPWLA--NILDMDK 293
Query: 184 RSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
P HPDY+P+TLY+PP + +P Q+W IK + +D V+FFK GKFYEL+ DA IG
Sbjct: 294 NPPGHPDYDPRTLYIPPLAWSRFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIG 353
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 68/146 (46%), Gaps = 11/146 (7%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI---EDK 445
RGT + DG +A+ L IG L FATHYHS+A P ++ M ED+
Sbjct: 1047 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLAAEFEGHPEISPRRMRIHVDEEDR 1106
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIH 505
R + FLYKL G+ SFG + A + GIP V++ A + E L++
Sbjct: 1107 R------VTFLYKLEDGVAEGSFGMHCASMCGIPTQVIETAEVAAKEWEHTSRLKESVER 1160
Query: 506 KFAS-LVKSGEKVDVEELQKALESVK 530
K S LV G D+ + K + V+
Sbjct: 1161 KKGSGLVGLGWWSDIAWILKDDDVVR 1186
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 5/114 (4%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYL-RTQCA 337
PDM LL+Y++ AFD +A +G +PKAGV++++D I+ IE ++ L R +
Sbjct: 745 MPDMDGLLQYWKTAFDRVKAKDSGIFVPKAGVEEDFDASTQRIEEIEAKLDQLLKRVRRE 804
Query: 338 HFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRG 391
+IY + K + Y LEVP K + KS Q ATK+ + Y PE RG
Sbjct: 805 LNSSAIIYRDNGK--EIYQLEVPVKVRNIPKSWDQMSATKQ--AKRYYFPELRG 854
>gi|303321249|ref|XP_003070619.1| MutS domain III family protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240110315|gb|EER28474.1| MutS domain III family protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 1221
Score = 93.6 bits (231), Expect = 2e-16, Method: Compositional matrix adjust.
Identities = 82/240 (34%), Positives = 109/240 (45%), Gaps = 21/240 (8%)
Query: 17 SSTPASSKGKKTSKSPAKSEDDSPVTKRPRRKSA------KRVKSAIQSDSE---PDDML 67
S+TP S + KKT EDD V K P RKSA KR AI D E PDD +
Sbjct: 139 SATP-SRRAKKTVDYWESDEDD--VVKPPTRKSAVGRANKKRRTVAISEDEEEFQPDDNI 195
Query: 68 QDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPT----PSSSEAEVTPMKNGNKRGL 123
D D+++ P ES+ E + S PT P S+ + +
Sbjct: 196 GDFDDLDDFIVPD---ESDQEMRPSRKRKRSSNPKPTKPSTPISAPQDDMDVDLDIPDSA 252
Query: 124 SSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADR 183
S + + T P T T P+S S Y +L +ILD D+
Sbjct: 253 SGTAKKWTYDPNDTECRQHRTTLAPLSSKSLGKKKEKAHLTEPEKRYPWLA--NILDMDK 310
Query: 184 RSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
P HPDY+P+TLY+PP + +P Q+W IK + +D V+FFK GKFYEL+ DA IG
Sbjct: 311 NPPGHPDYDPRTLYIPPLAWSRFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIG 370
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 52/163 (31%), Positives = 75/163 (46%), Gaps = 13/163 (7%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI---EDK 445
RGT + DG +A+ L IG L FATHYHS+A P ++ M ED+
Sbjct: 1064 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLAAEFEGHPEISPRRMRIHVDEEDR 1123
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIH 505
R + FLYKL G+ SFG + A + GIP V++ A + E L++
Sbjct: 1124 R------VTFLYKLEDGVAEGSFGMHCASMCGIPTKVIETAEVAAKEWEHTSRLKESVER 1177
Query: 506 KFAS-LVKSGEKVDVEELQKALESVKSFESQTKKDLEDLPGGV 547
K S LV G D+ + K + V+ +S K +E L +
Sbjct: 1178 KKGSGLVGLGWWSDIAWILKDDDVVR--DSADGKGMEVLLNAI 1218
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 5/114 (4%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYL-RTQCA 337
PDM LL+Y++ AFD +A +G +PKAGV++++D I+ IE ++ L R +
Sbjct: 762 MPDMDGLLQYWKTAFDRVKAKDSGIFVPKAGVEEDFDASTQRIEEIEAKLDQLLKRVRRE 821
Query: 338 HFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRG 391
+IY + K + Y LEVP K + KS Q ATK+ + Y PE RG
Sbjct: 822 LNSSAIIYRDNGK--EIYQLEVPVKVRNIPKSWDQMSATKQ--AKRYYFPELRG 871
>gi|449298624|gb|EMC94639.1| hypothetical protein BAUCODRAFT_111690 [Baudoinia compniacensis
UAMH 10762]
Length = 1206
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/261 (29%), Positives = 114/261 (43%), Gaps = 70/261 (26%)
Query: 23 SKGKKTSKSPAKSEDDSPVTKRP---RRKSAKRVKSAIQSDSEPDDMLQDNGSEDEY-VP 78
S+ K + A+S+DD RP + +++KR + +++ +SE DEY
Sbjct: 118 SRKAKKQVNYAESDDDGDEEPRPLPGKGRASKRRRISVKDESE-----------DEYGFD 166
Query: 79 PKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTA 138
+ +S +G +++ ED P +S KR S + T KP
Sbjct: 167 AATQAAMDSADDAGSFVVDDEEEDVRPVASR----------KRSRGSNGRKSTSKP---- 212
Query: 139 PSTPSTPSFPVS--DTSETTPSTSGAQDWSHN---------------------------- 168
PS P V + SE P+ S AQ W+ +
Sbjct: 213 ---PSPPVLDVDMREESEEIPTVSTAQQWTFDPDAPPSNQPRKLPPKRPQPDPNKKQKAH 269
Query: 169 ------HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFD 222
Y +L HILDADR P HPDY+P+TLY+PP K +P Q+W IK + ++
Sbjct: 270 TTDPSERYTWLA--HILDADRHPPDHPDYDPRTLYIPPLAWNKFSPFEKQYWEIKQKFWN 327
Query: 223 CVLFFKVGKFYELFHMDAVIG 243
++FFK GKFYEL+ DA IG
Sbjct: 328 TIVFFKKGKFYELYENDATIG 348
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 49/95 (51%), Gaps = 4/95 (4%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L +G L FATHYHS+A P +A + M+ +
Sbjct: 1046 RGTSSYDGVAVAQAVLHHVATHVGALGYFATHYHSLAAEFAPHPEIAPKRMAV---RVEH 1102
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
I + FLYKL GI S+G + A + GIP V+
Sbjct: 1103 DIRDVTFLYKLENGIAEGSYGMHCAAMCGIPNRVI 1137
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 59/111 (53%), Gaps = 2/111 (1%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
P+++ L +++AFD +A G IP+ GV+ E+DE + I +IEK++Q L
Sbjct: 742 MPNLAGALHDWKDAFDRPKAKDDGIFIPQPGVEAEFDESQERIDNIEKDLQKLLNKARKD 801
Query: 339 FGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPEC 389
G + I K+ Y LEVP K SN +++++ K V+ + +PE
Sbjct: 802 LGSSAIKFTDNGKE-IYQLEVPIKVKGTIPSNWKQMSSTKA-VKRWYSPEL 850
>gi|336110042|gb|AEI16789.1| mutS protein 6 [Dipsosaurus dorsalis]
Length = 361
Score = 93.6 bits (231), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 38/65 (58%), Positives = 52/65 (80%), Gaps = 1/65 (1%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P+Y+P TL+VP E+L+ TP M +WW + SQ FDCV+F+KVGKFYEL+HMDAV+G ++L
Sbjct: 1 PEYDPTTLFVPEEYLRNCTPGMRKWWEL-SQYFDCVIFYKVGKFYELYHMDAVVGVNKLG 59
Query: 249 CSYMK 253
+MK
Sbjct: 60 LVFMK 64
>gi|326477690|gb|EGE01700.1| DNA mismatch repair protein msh6 [Trichophyton equinum CBS 127.97]
Length = 1215
Score = 93.2 bits (230), Expect = 3e-16, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 115/244 (47%), Gaps = 18/244 (7%)
Query: 13 GDSESSTPASSKGKKTSKSPAKSEDD---SPVTKRPRRKSAKRVKSAIQSDSEPDDMLQD 69
G+ E S +S + + KS +SED+ P + R +S KR ++A S E D
Sbjct: 114 GNHEFSNTSSRRARTAVKSYEESEDEDVVQPGRRNARVRSQKRRRTADHSSDEECFKPDD 173
Query: 70 NGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSS----EAEVTPMKNGNKRGLS- 124
N ED+Y+ + + S EEE++ S + PS + E+ P G+ L
Sbjct: 174 NDDEDKYIDDTDDFIVPDDES--EEEVKSSRKRKRPSKAASKKESSSLPPITGDDMDLEI 231
Query: 125 -SKSGQPTKK----PKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHIL 179
++ T+K P P P P +T + N Y +L +I+
Sbjct: 232 PQRTSGSTQKWRYDPDNVEPYEPRKP-LVKPETHSSIKQKKAHMTEPENRYPWLA--NIM 288
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
D D+ HPDY+P+TLY+PP K +P Q+W IK + +D V+FFK GKFYEL+ D
Sbjct: 289 DMDKNPLGHPDYDPRTLYIPPLAWSKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEND 348
Query: 240 AVIG 243
A IG
Sbjct: 349 ATIG 352
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IG L FATHYHS+A P +A M D D
Sbjct: 1053 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLAAEFEGHPEIAARRMRIHVD---D 1109
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLYKL G+ SFG + A + GIP VV+ A Q E +++
Sbjct: 1110 AERRVTFLYKLEDGVAEGSFGMHCASMCGIPSKVVEGAEIAAKQWEHTSRMKE 1162
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 13/146 (8%)
Query: 246 ELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNII 305
E +KE+G +G L+ QL + PD++ LL+++E AFD +A + ++
Sbjct: 728 EYTMGLLKEAG-SGHG-LIGQLIS--------AMPDLNGLLQFWETAFDRAKARESDILV 777
Query: 306 PKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYAS 365
P+ G+++E+D I+ +E+E++ L+ C+ I + K+ Y LEVP K +
Sbjct: 778 PEEGIEEEFDASKKNIEQLEEELEQVLQRTRKELKCSTIVFKDNGKE-IYQLEVPIKIKN 836
Query: 366 KAKSNHQRVATKKKNVENYVTPECRG 391
KS Q ATK+ V+ Y PE R
Sbjct: 837 IPKSWDQMSATKQ--VKRYYFPELRA 860
>gi|336110050|gb|AEI16793.1| mutS protein 6 [Leiosaurus catamarcensis]
Length = 355
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 36/59 (61%), Positives = 49/59 (83%)
Query: 195 TLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
TL+VP ++L+ TP M +WW +KSQNFDCV+F+KVGKFYEL+HMDAV+G ++L +MK
Sbjct: 1 TLFVPEDYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNKLGLVFMK 59
>gi|326473228|gb|EGD97237.1| DNA mismatch repair protein Msh6 [Trichophyton tonsurans CBS
112818]
Length = 1215
Score = 93.2 bits (230), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 77/244 (31%), Positives = 115/244 (47%), Gaps = 18/244 (7%)
Query: 13 GDSESSTPASSKGKKTSKSPAKSEDD---SPVTKRPRRKSAKRVKSAIQSDSEPDDMLQD 69
G+ E S +S + + KS +SED+ P + R +S KR ++A S E D
Sbjct: 114 GNHEFSNTSSRRARTAVKSYEESEDEDVVQPGRRNARVRSQKRRRTADHSSDEECFKPDD 173
Query: 70 NGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSS----EAEVTPMKNGNKRGLS- 124
N ED+Y+ + + S EEE++ S + PS + E+ P G+ L
Sbjct: 174 NDDEDKYIDDTDDFIVPDDES--EEEVKSSRKRKRPSKAASKKESSSLPPITGDDMDLEI 231
Query: 125 -SKSGQPTKK----PKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHIL 179
++ T+K P P P P +T + N Y +L +I+
Sbjct: 232 PQRTSGSTQKWRYDPDNVEPYEPRKP-LVKPETHSSIKQKKAHMTEPENRYPWLA--NIM 288
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
D D+ HPDY+P+TLY+PP K +P Q+W IK + +D V+FFK GKFYEL+ D
Sbjct: 289 DIDKNPLGHPDYDPRTLYIPPLAWSKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEND 348
Query: 240 AVIG 243
A IG
Sbjct: 349 ATIG 352
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IG L FATHYHS+A P +A M D D
Sbjct: 1053 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLAAEFEGHPEIAARRMRIHVD---D 1109
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLYKL G+ SFG + A + GIP VV+ A Q E +++
Sbjct: 1110 AERRVTFLYKLEDGVAEGSFGMHCASMCGIPSKVVEGAEIAAKQWEHTSRMKE 1162
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 45/146 (30%), Positives = 76/146 (52%), Gaps = 13/146 (8%)
Query: 246 ELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNII 305
E +KE+G +G L+ QL + PD++ LL+++E AFD +A + ++
Sbjct: 728 EYTMGLLKEAG-SGHG-LIGQLIS--------AMPDLNGLLQFWETAFDRAKARESDILV 777
Query: 306 PKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYAS 365
P+ G+++E+D I+ +E+E++ L+ C+ I + K+ Y LEVP K +
Sbjct: 778 PEEGIEEEFDASKKNIEQLEEELEQVLQRTRKELKCSTIVFKDNGKE-IYQLEVPIKIKN 836
Query: 366 KAKSNHQRVATKKKNVENYVTPECRG 391
KS Q ATK+ V+ Y PE R
Sbjct: 837 IPKSWDQMSATKQ--VKRYYFPELRA 860
>gi|336109968|gb|AEI16752.1| mutS protein 6 [Lepidophyma flavimaculatum]
Length = 358
Score = 92.8 bits (229), Expect = 4e-16, Method: Compositional matrix adjust.
Identities = 37/62 (59%), Positives = 50/62 (80%)
Query: 192 NPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSY 251
+P TL+VP ++LK TP M +WW +KSQNFD V+F+KVGKFYEL+HMDAV+G ++L +
Sbjct: 1 DPTTLFVPEDYLKNCTPGMRKWWELKSQNFDSVIFYKVGKFYELYHMDAVVGVNKLGLGF 60
Query: 252 MK 253
MK
Sbjct: 61 MK 62
>gi|403220570|dbj|BAM38703.1| uncharacterized protein TOT_010001218 [Theileria orientalis strain
Shintoku]
Length = 1014
Score = 92.4 bits (228), Expect = 6e-16, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 65/109 (59%), Gaps = 3/109 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG IA TLEK +IGC VF TH+ V R +E NV +M+ D++
Sbjct: 867 RGTSTFDGTAIAAATLEKISKIGCRCVFTTHFQDVCRSAKEFKNVTMYHMAARVDEQEQN 926
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
++ FLYKLVPG+CP S G +VA+LA IP+ V++ + ++ +N
Sbjct: 927 VE---FLYKLVPGVCPDSHGLHVAKLAKIPDHVLRTARSARLRLIGSNN 972
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 59/111 (53%), Gaps = 17/111 (15%)
Query: 159 TSGAQDWSHNHYQF---------LHPDHILDADRRSPKHPDYNPKTLYVPP-------EF 202
+ G +++ N+Y++ L +I DAD R P DY T+++PP EF
Sbjct: 52 SRGFREYVDNYYRYKGTFAFPPWLEVKNIRDADGRKPTEEDYKVNTMWIPPKNHRWAYEF 111
Query: 203 LKKQ-TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYM 252
T CM QWW IK +FD ++FFK+G+FYELF+ DA I + +M
Sbjct: 112 RSGHYTECMQQWWNIKQNHFDSLVFFKMGRFYELFYHDACILQSLVNLRWM 162
>gi|357500449|ref|XP_003620513.1| DNA mismatch repair protein Msh6-2 [Medicago truncatula]
gi|355495528|gb|AES76731.1| DNA mismatch repair protein Msh6-2 [Medicago truncatula]
Length = 1160
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 53/78 (67%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
+++L P I DA+ R P P Y+ TLY+PPE L+K T Q+W++K + D +LFFKV
Sbjct: 285 FEWLDPSRIRDANGRRPDDPLYDRTTLYIPPEVLRKMTASQKQYWSVKCKYMDVLLFFKV 344
Query: 230 GKFYELFHMDAVIGADEL 247
GKFYEL+ MDA IG EL
Sbjct: 345 GKFYELYEMDAEIGHKEL 362
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA ++ + C +FATHYH + + P V ++M+ ++D
Sbjct: 989 RGTSTFDGYAIAYAVFRHLIEKVNCRLLFATHYHPLTKEFASHPRVTMQHMACAFKSKSD 1048
Query: 449 GIDT----IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ +VFLY+L PG CP+S+G VA +AGIPE V + + QM+
Sbjct: 1049 TLSKQDQELVFLYRLAPGACPESYGLQVALMAGIPEKTVNVASKASQQMK 1098
>gi|336109948|gb|AEI16742.1| mutS protein 6 [Aspidoscelis tigris]
Length = 358
Score = 91.7 bits (226), Expect = 9e-16, Method: Compositional matrix adjust.
Identities = 36/62 (58%), Positives = 50/62 (80%)
Query: 192 NPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSY 251
+P TL+VP ++L+ TP M +WW +KSQNFD V+F+KVGKFYEL+HMDAV+G ++L +
Sbjct: 1 DPSTLFVPEDYLQNCTPGMRKWWELKSQNFDAVIFYKVGKFYELYHMDAVVGVNKLGLVF 60
Query: 252 MK 253
MK
Sbjct: 61 MK 62
>gi|336109976|gb|AEI16756.1| mutS protein 6 [Eugongylus rufescens]
Length = 345
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 36/61 (59%), Positives = 49/61 (80%)
Query: 193 PKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYM 252
P TL+VP ++LK TP M +WW IK+QNFD V+F+KVGKFYEL+HMDAV+G +++ +M
Sbjct: 1 PXTLFVPEDYLKNCTPGMRKWWEIKAQNFDSVIFYKVGKFYELYHMDAVVGVNKMGLGFM 60
Query: 253 K 253
K
Sbjct: 61 K 61
>gi|403365718|gb|EJY82649.1| DNA repair protein, putative [Oxytricha trifallax]
Length = 1348
Score = 91.7 bits (226), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 69/135 (51%), Gaps = 12/135 (8%)
Query: 130 PTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQD-------WSHNHYQ-----FLHPDH 177
P K ++ PST FP ++ + A D H Q FL DH
Sbjct: 263 PNKPSAISNGHQPSTGGFPNNNKQKYQNKQKQAIDDEMPNQAQKHTVIQDDLPIFLRKDH 322
Query: 178 ILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFH 237
I DA R P P+Y+ TL++P K+ T CM Q+W IKS+NFD ++FFK+GKFYE+F
Sbjct: 323 IRDAKMRRPSDPNYDKTTLHIPHNEWKQFTQCMVQYWKIKSENFDKIIFFKLGKFYEIFD 382
Query: 238 MDAVIGADELACSYM 252
DA I L ++M
Sbjct: 383 YDAEICNKLLDINFM 397
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L I C ++F+THYH + + R+ + +M+ + +
Sbjct: 1113 RGTSTFDGYSIAHAVLNYLTNYIKCRSLFSTHYHLLLDKFRDVEGIKSYHMACKQSETEQ 1172
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
D I FLYK + G CP+SFG NVA++AG+P +V++
Sbjct: 1173 --DRIEFLYKFIEGDCPQSFGMNVAKMAGLPINVIR 1206
>gi|336109954|gb|AEI16745.1| mutS protein 6 [Cordylosaurus subtesselatus]
Length = 360
Score = 91.3 bits (225), Expect = 1e-15, Method: Compositional matrix adjust.
Identities = 37/65 (56%), Positives = 50/65 (76%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
PDY+P T++VP ++LK TP M +WW IKSQ FD V+ +KVGKFYEL+HMDAV+ ++L
Sbjct: 1 PDYDPTTIFVPEDYLKNCTPGMRKWWEIKSQYFDSVICYKVGKFYELYHMDAVVAVNKLG 60
Query: 249 CSYMK 253
+MK
Sbjct: 61 LEFMK 65
>gi|403351679|gb|EJY75335.1| DNA repair protein, putative [Oxytricha trifallax]
Length = 1227
Score = 90.5 bits (223), Expect = 2e-15, Method: Compositional matrix adjust.
Identities = 51/135 (37%), Positives = 69/135 (51%), Gaps = 12/135 (8%)
Query: 130 PTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQD-------WSHNHYQ-----FLHPDH 177
P K ++ PST FP ++ + A D H Q FL DH
Sbjct: 142 PNKPNAISNGHQPSTGGFPNNNKQKYQNKQKQAVDDEMPNQAQKHTVTQDDLPIFLRKDH 201
Query: 178 ILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFH 237
I DA R P P+Y+ TL++P K+ T CM Q+W IKS+NFD ++FFK+GKFYE+F
Sbjct: 202 IRDAKMRRPSDPNYDKTTLHIPHNEWKQFTQCMVQYWKIKSENFDKIIFFKLGKFYEIFD 261
Query: 238 MDAVIGADELACSYM 252
DA I L ++M
Sbjct: 262 YDAEICNKLLDINFM 276
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 56/96 (58%), Gaps = 3/96 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L I C ++F+THYH + + R+ + +M+ + +
Sbjct: 992 RGTSTFDGYSIAHAVLNYLTNYIKCRSLFSTHYHLLLDKFRDVEGIKSYHMACKQSETEQ 1051
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
D I FLYK + G CP+SFG NVA++AG+P +V++
Sbjct: 1052 --DRIEFLYKFIEGDCPQSFGMNVAKMAGLPINVIR 1085
>gi|336110072|gb|AEI16804.1| mutS protein 6 [Stenocercus guentheri]
Length = 349
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 35/59 (59%), Positives = 48/59 (81%)
Query: 195 TLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
TL+VP ++L+ TP M +WW +KSQ FDCV+F+KVGKFYEL+HMDAV+G ++L +MK
Sbjct: 1 TLFVPEDYLRNCTPGMRKWWELKSQYFDCVIFYKVGKFYELYHMDAVVGVNKLGLVFMK 59
>gi|357612845|gb|EHJ68197.1| putative DNA mismatch repair protein muts [Danaus plexippus]
Length = 622
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 63/215 (29%), Positives = 93/215 (43%), Gaps = 21/215 (9%)
Query: 329 QTYLRTQCAHFGCTVIYSEAQKK----------QKKYVLEVPSKYASKAKSNHQRVATKK 378
Q L T AH GC V SE + +L S + + V
Sbjct: 410 QVGLLTVLAHLGCHVPASECRLSVCDRIFTRLGASDDILSGQSTFLVEMNETAAIVKHAT 469
Query: 379 KNVENYVTPECRGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEY 438
K+ + RGT T DG IA C T+F+THYHS+ L + P V +
Sbjct: 470 KHSLVLLDELGRGTSTYDGTCIAWSVCWWLAGRSCRTLFSTHYHSLVHHLADHPAVLLGH 529
Query: 439 MSYIEDKRNDGID-------TIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAF 491
M+ + + D TI FLYKL PG CPKS+GFN A LAGIP ++ + T++
Sbjct: 530 MACMVETDESAPDGDHIPEETITFLYKLSPGACPKSYGFNAARLAGIPREITQRAHTISR 589
Query: 492 QMEARHNLRQLFIHKFASLVKSGEKVDVEELQKAL 526
+E+ + F ++K+ ++ ++ AL
Sbjct: 590 NLESEATC----VRAFRDVIKTDNAAELRKILSAL 620
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 74/131 (56%), Gaps = 6/131 (4%)
Query: 260 ESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
++ LL +L + P G FPD + LK+F+ F+ +EA G I+P +GVD +YD +
Sbjct: 163 DAELLKKLTQF---APEGRFPDYRDTLKFFKEGFNQQEAEKEGRILPGSGVDADYDNTIQ 219
Query: 320 EIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKK 379
I++I+ E++ YL Q +F C + Y + K K+Y +EVP A KA S++ + +K
Sbjct: 220 LIQNIQDELKEYLSEQERYFKCRLTYVGSDK--KRYQIEVPQSAAGKANSDYH-LEGARK 276
Query: 380 NVENYVTPECR 390
+ Y T E +
Sbjct: 277 GFKRYSTVETK 287
>gi|440794306|gb|ELR15471.1| MutS domain V domain containing protein [Acanthamoeba castellanii
str. Neff]
Length = 1150
Score = 90.1 bits (222), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 67/108 (62%), Gaps = 6/108 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA LE ++GC T+F+THYH + + P++A ++MS +I+D R
Sbjct: 961 RGTATFDGYSIAYAVLEHLSRKVGCRTLFSTHYHMLTDEVVRNPHIALKHMSCHIDDDRK 1020
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
+ + FLYK+ G+CPKS+G NVA +AG+ E++V +A + E
Sbjct: 1021 E----VTFLYKVADGVCPKSYGMNVARMAGVNEEIVASAEKIAQKFEG 1064
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 62/113 (54%), Gaps = 5/113 (4%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
FPD++ L+YF AFD +A S +I + GVD+E+D +++++IE+++Q +L
Sbjct: 652 FPDIAPQLEYFSRAFDRDQAKSEQRLILRPGVDEEFDAAREKVETIEQQLQQHLEDLKEE 711
Query: 339 FGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVA----TKKKNVENYVTP 387
G + + + A + K+Y++E+P ++A + K+V Y TP
Sbjct: 712 VGISDM-AYATVRNKEYLIEIPRTPKNEAAIKRHKSTFIPINDTKSVGRYWTP 763
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 25/63 (39%), Positives = 38/63 (60%)
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
DA RS P Y+P TL++P + L+ Q+W IK Q++D ++F + G F+EL+ D
Sbjct: 173 DAQGRSRDDPAYDPSTLFIPRKDLEGMNTFQRQYWEIKKQHWDKIIFCRNGVFWELYEKD 232
Query: 240 AVI 242
A I
Sbjct: 233 AEI 235
>gi|300123248|emb|CBK24521.2| unnamed protein product [Blastocystis hominis]
Length = 1265
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 47/119 (39%), Positives = 66/119 (55%), Gaps = 2/119 (1%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIG-CLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG I L+ I C +F+THY+ + +P+++ YMSY+ ++ N
Sbjct: 1121 RGTSTYDGSAIVYAVLKYLSHIKKCRLLFSTHYNFIITSFVNDPSISTGYMSYLLEQVN- 1179
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKF 507
G D + FLYKLV G+CP+SFG NVA L+ IPE V+ VA NL + + F
Sbjct: 1180 GQDRVTFLYKLVEGVCPESFGLNVARLSMIPESVLSRAKEVADMFNINLNLDSVTVKYF 1238
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 54/152 (35%), Positives = 76/152 (50%), Gaps = 8/152 (5%)
Query: 103 PTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGA 162
P PS S +P+ +K L S P PK S +S+ +G
Sbjct: 198 PAPSISAYSSSPVSTPSK--LPRPSSTPKSTPKRQRTSEAGLDDEKLSEKKGAVILNAG- 254
Query: 163 QDWSHNHYQFL-HPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNF 221
+ +H++ +++ HP D + SP P Y+P +L+VP ++L+ T M QWW +K Q F
Sbjct: 255 -EHAHDNTEWMIHPR---DKYKHSPSDPKYDPTSLFVPSDYLRGCTNGMKQWWAVKQQAF 310
Query: 222 DCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
DCVL KVGKFYE +HMDA I YMK
Sbjct: 311 DCVLLMKVGKFYETYHMDADIVVKVCDLVYMK 342
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 31/111 (27%), Positives = 58/111 (52%), Gaps = 3/111 (2%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
FPDM+ +L +F+++F+H+ A G I+PK G+D E D++ +++S ++ ++ YL
Sbjct: 808 FPDMTSVLDFFDHSFNHEVAIEQGIIMPKPGMDPELDKISMDLQSTQRNLENYLEEIRNR 867
Query: 339 FGCTVIYSEAQKKQKKYVLEVPSKYASK--AKSNHQRVATKKKNVENYVTP 387
F C I K ++ L+ P A + ++KK + + TP
Sbjct: 868 FHCQKIEYFGSNKD-RFQLQFPESVCQSLGAMPKEFLLKSRKKGFKRFWTP 917
>gi|168029288|ref|XP_001767158.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162681654|gb|EDQ68079.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 903
Score = 89.7 bits (221), Expect = 3e-15, Method: Compositional matrix adjust.
Identities = 40/78 (51%), Positives = 53/78 (67%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
+++L P+ I DA R P HP Y+ +TL++PP+ L K T Q+WT KS+ D VLFFKV
Sbjct: 23 FEWLLPNKIKDAMGRRPDHPLYDKRTLHIPPDVLSKMTASQRQYWTAKSKYMDTVLFFKV 82
Query: 230 GKFYELFHMDAVIGADEL 247
GKFYEL+ DA IG E+
Sbjct: 83 GKFYELYEFDAEIGQKEM 100
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 47/142 (33%), Positives = 71/142 (50%), Gaps = 18/142 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYM------SYI 442
RGT T DG IA L + + C +FATHYH++ P+V +M S
Sbjct: 738 RGTSTFDGYAIAYAVLRHVVDTLDCRLLFATHYHALTTEFASHPSVGLRHMACSLLQSDY 797
Query: 443 EDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK--------FGTTVAFQME 494
+ ++ G IVFLYKL G+C +S+G VA LAG+P +V+ T ++ +
Sbjct: 798 KSGKSIGEQEIVFLYKLTEGVCQQSYGLQVATLAGLPPSLVRSAECASNAIKTKISSAFD 857
Query: 495 A---RHNLRQLFIHKFASLVKS 513
A + L L + FA+LV++
Sbjct: 858 AALVKEGLPHLHMQWFAALVEA 879
>gi|449685383|ref|XP_002165963.2| PREDICTED: DNA mismatch repair protein Msh6-like [Hydra
magnipapillata]
Length = 354
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 48/110 (43%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L + + +GC T+F+THYH + PNV +M+ + + N+
Sbjct: 218 RGTATYDGTAIASAVLHELSKGLGCRTLFSTHYHGIVDEFANIPNVKVGHMACMVECDNE 277
Query: 449 GID----TIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
D I FLYKL G CPKS+GFN A+LAGIP ++K G A Q E
Sbjct: 278 DDDPTKENITFLYKLTSGACPKSYGFNAAKLAGIPLCIIKSGHVKAKQFE 327
>gi|224104179|ref|XP_002333974.1| predicted protein [Populus trichocarpa]
gi|222839403|gb|EEE77740.1| predicted protein [Populus trichocarpa]
Length = 805
Score = 89.7 bits (221), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 40/68 (58%), Positives = 47/68 (69%)
Query: 186 PKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGAD 245
P DY+P+TLY+P EF K T QWW KS++ D VLFFK+GKFYELF MDA +GA
Sbjct: 343 PGDVDYDPRTLYLPAEFAKSLTGGQRQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAK 402
Query: 246 ELACSYMK 253
EL YMK
Sbjct: 403 ELDLQYMK 410
>gi|325087831|gb|EGC41141.1| DNA mismatch repair protein [Ajellomyces capsulatus H88]
Length = 1178
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 73/251 (29%), Positives = 114/251 (45%), Gaps = 31/251 (12%)
Query: 10 EKKGDSESSTPASSKGKKTSKSPAKSEDDS---PVTKRPRRKSAKRVKSAIQSDSEPDDM 66
+ +G SS + + KK KS +S+DD P+ ++ R+S KR K+A S S+ D+
Sbjct: 124 DDEGADRSSVTPTRRAKKAVKSYLESDDDEDVLPINRKSSRRSLKRRKTAAGS-SDEDEF 182
Query: 67 LQD----NGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRG 122
D + D +V P E+E++ S + PS++ +++ K R
Sbjct: 183 KNDTEFSDDDLDNFVVP----------DDSEDEVKPSKKRKRPSNTAVKISSSKPSPIRD 232
Query: 123 ----------LSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQF 172
+ + T P T P P P+ + Y +
Sbjct: 233 EEFDFELPDVCGGSALKWTYDPNDTVPRKPR-PAVVRNIAPGEKKKVKAHMSEPEQRYPW 291
Query: 173 LHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKF 232
L +I D DR P HPDY+P+T+Y+PP K +P Q+W IK + +D ++FFK GKF
Sbjct: 292 LA--NITDIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFWDTIVFFKKGKF 349
Query: 233 YELFHMDAVIG 243
YEL+ DA IG
Sbjct: 350 YELYENDATIG 360
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IG L FATHYHS+A P +A M D+
Sbjct: 1016 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLASEFEGHPEIAPRRMRIHVDEEER 1075
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLYKL GI SFG + A + GIP VV+ A Q E L++
Sbjct: 1076 ---RVTFLYKLEEGIAEGSFGMHCASMCGIPNKVVERAEIAAKQWEHTSRLKE 1125
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 36/114 (31%), Positives = 57/114 (50%), Gaps = 3/114 (2%)
Query: 277 GCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQC 336
PD+S L+Y++ AFD +A + ++P+AGV++++D D I IE ++ L+
Sbjct: 755 ASMPDLSGYLQYWKTAFDRTKAKDSSILVPEAGVEEDFDASHDRISEIESDLDRLLKEVR 814
Query: 337 AHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
G I K+ Y LEVP K + K Q ATK+ + + PE R
Sbjct: 815 KKLGSNAIVYRDNGKE-IYQLEVPIKIKNVPKDWDQMSATKQ--AKRFYFPELR 865
>gi|30687514|ref|NP_850630.1| DNA mismatch repair protein Msh6-2 [Arabidopsis thaliana]
gi|12643849|sp|Q9SMV7.1|MSH7_ARATH RecName: Full=DNA mismatch repair protein MSH7; Short=AtMSH7;
AltName: Full=MutS protein homolog 7
gi|3757550|emb|CAA07685.1| Msh6-2 protein [Arabidopsis thaliana]
gi|9294039|dbj|BAB01996.1| DNA repair protein MutS [Arabidopsis thaliana]
gi|332643383|gb|AEE76904.1| DNA mismatch repair protein Msh6-2 [Arabidopsis thaliana]
Length = 1109
Score = 89.4 bits (220), Expect = 4e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
+++L I DA+RR P P Y+ KTL++PP+ KK + Q+W++KS+ D VLFFKV
Sbjct: 231 FEWLESSRIRDANRRRPDDPLYDRKTLHIPPDVFKKMSASQKQYWSVKSEYMDIVLFFKV 290
Query: 230 GKFYELFHMDAVIGADEL 247
GKFYEL+ +DA +G EL
Sbjct: 291 GKFYELYELDAELGHKEL 308
Score = 75.1 bits (183), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA ++ + C +FATHYH + + P V ++M+ R+D
Sbjct: 936 RGTSTFDGYAIAYSVFRHLVEKVQCRMLFATHYHPLTKEFASHPRVTSKHMACAFKSRSD 995
Query: 449 ----GIDT-IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
G D +VFLY+L G CP+S+G VA +AGIP VV+ + A M+
Sbjct: 996 YQPRGCDQDLVFLYRLTEGACPESYGLQVALMAGIPNQVVETASGAAQAMK 1046
>gi|6224917|gb|AAF06013.1|AF193018_1 MutS homolog 7 [Arabidopsis thaliana]
Length = 1109
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 54/78 (69%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
+++L I DA+RR P P Y+ KTL++PP+ KK + Q+W++KS+ D VLFFKV
Sbjct: 231 FEWLESSRIRDANRRRPDDPLYDRKTLHIPPDVFKKMSASQKQYWSVKSEYMDIVLFFKV 290
Query: 230 GKFYELFHMDAVIGADEL 247
GKFYEL+ +DA +G EL
Sbjct: 291 GKFYELYELDAELGHKEL 308
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 60/111 (54%), Gaps = 6/111 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA ++ + C +FATHYH + + P V ++M+ R+D
Sbjct: 936 RGTSTFDGYAIAYSVFRHLVEKVQCRMLFATHYHPLTKEFASHPRVTSKHMACAFKSRSD 995
Query: 449 ----GIDT-IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
G D +VFLY+L G CP+S+G VA +AGIP VV+ + A M+
Sbjct: 996 YQPRGCDQDLVFLYRLTEGACPESYGLQVALMAGIPNQVVETASGAAQAMK 1046
>gi|403332180|gb|EJY65086.1| MutS domain III family protein [Oxytricha trifallax]
Length = 1185
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 36/81 (44%), Positives = 56/81 (69%)
Query: 172 FLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGK 231
F+ ++I+D ++R P+ P+Y+P TLY+P + TP M Q+W IK N+D +LFFK+GK
Sbjct: 254 FIKEEYIMDMEKRKPEDPEYDPTTLYIPGDKWNGFTPAMYQYWEIKVHNYDKILFFKLGK 313
Query: 232 FYELFHMDAVIGADELACSYM 252
FYE+F+ DA+I L ++M
Sbjct: 314 FYEIFYNDAIICQKLLDLNWM 334
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 60/111 (54%), Gaps = 4/111 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L+ + I C ++FATHYH + R V +M+ + N+
Sbjct: 1054 RGTSTFDGYSIAHAVLKYLVNNIRCRSLFATHYHMLLDEFRGARGVKSYHMAC---RANE 1110
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
D ++FLY+ G CP SFG NVA +AGIP++V+ + + + N+
Sbjct: 1111 DKDEVMFLYRFEKGECPTSFGINVARMAGIPKNVLDAAKRKSLEFSEKLNI 1161
>gi|255546545|ref|XP_002514332.1| DNA mismatch repair protein MSH6-2, putative [Ricinus communis]
gi|223546788|gb|EEF48286.1| DNA mismatch repair protein MSH6-2, putative [Ricinus communis]
Length = 1089
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 40/82 (48%), Positives = 55/82 (67%)
Query: 166 SHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVL 225
S + +++L P I D + R P P Y+ KTLY+PP+ L+ + Q+W++KSQ D VL
Sbjct: 213 STSKFEWLDPLRIRDINGRRPSDPLYDKKTLYIPPDALRIMSASQKQYWSVKSQYMDVVL 272
Query: 226 FFKVGKFYELFHMDAVIGADEL 247
FFKVGKFYEL+ +DA IG EL
Sbjct: 273 FFKVGKFYELYELDAEIGHKEL 294
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 37/100 (37%), Positives = 56/100 (56%), Gaps = 5/100 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS----YIED 444
RGT T DG IA ++ + C +FATHYH + + P V ++M+ +
Sbjct: 919 RGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHPLTKEFGSNPRVILQHMACAFKSKSE 978
Query: 445 KRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
++ +VFLY+L G CP+S+G VA +AGIPE+VV+
Sbjct: 979 SYSESDQDLVFLYRLASGACPESYGLQVAVMAGIPENVVE 1018
>gi|358366152|dbj|GAA82773.1| DNA mismatch repair protein Msh6 [Aspergillus kawachii IFO 4308]
Length = 1210
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 122/246 (49%), Gaps = 9/246 (3%)
Query: 4 DSKESPEKKGDSESSTPASSKGKKTS--KSPAKSEDDSPVTKRPRRKSA-KRVKSAIQSD 60
+++ESP K + ++++P+ K+ + +S ++ EDD RP R S KR K + +SD
Sbjct: 109 NAQESPNSKAEMKTASPSRRAKKQVNYVESDSEGEDDDEKIFRPSRNSRNKRRKMSPESD 168
Query: 61 SEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNK 120
E +D S+DE +S+ E ++ S + + SSS V+P ++ +
Sbjct: 169 DEFNDGGDVGYSDDEMDDFIVADDSDEEAKPSKKRKRPSTQPKSKSSSLPPVSPDEDLDL 228
Query: 121 RGLSSKSGQPTK---KPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDH 177
+ +G K P+ + P P T +S T + + Y +L +
Sbjct: 229 DIPDASAGTALKWTYDPESSEPRQPRTAPVTPKKSSGATKQKAHVTE-PEQRYAWLA--N 285
Query: 178 ILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFH 237
I D D HP+Y+P+TLY+PP K +P Q+W IK + +D V+FFK GKFYEL+
Sbjct: 286 IRDIDGHPIGHPEYDPRTLYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYE 345
Query: 238 MDAVIG 243
DA IG
Sbjct: 346 NDATIG 351
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 78/145 (53%), Gaps = 12/145 (8%)
Query: 246 ELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNII 305
E S +KESG GE + Q SG PD+++LL+Y++ AFD +A G ++
Sbjct: 723 EYTMSLLKESGSAGEGVI--------GQLISG-MPDLNDLLEYWKTAFDRSKARENGILV 773
Query: 306 PKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYAS 365
PK GV++++D + I+ I +++++ L+ G + I + K+ Y LEVP K +
Sbjct: 774 PKPGVEEDFDSSQENIEQIHRDLESLLKRVRKELGSSAIIYKDNGKE-IYQLEVPIKVKN 832
Query: 366 KAKSNHQRVATKKKNVENYVTPECR 390
K+ Q ATK+ V+ Y PE R
Sbjct: 833 IPKNWDQMSATKQ--VKRYYFPELR 855
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 47/133 (35%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT + DG +A+ L IG L FATHYHS+A P +A + M +++D+
Sbjct: 1049 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLAAEFEGHPEIAPKRMRIHVDDEER 1108
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ-LFIHK 506
+ FLYKL G+ SFG + A + GIP+ V++ A Q E L++ L K
Sbjct: 1109 ----RVTFLYKLEDGVAEGSFGMHCAAMCGIPDKVIERAEVAAKQWEHTSRLKESLERRK 1164
Query: 507 FASLVKSGEKVDV 519
LV G DV
Sbjct: 1165 GGGLVGMGWWSDV 1177
>gi|315051840|ref|XP_003175294.1| DNA mismatch repair protein msh6 [Arthroderma gypseum CBS 118893]
gi|311340609|gb|EFQ99811.1| DNA mismatch repair protein msh6 [Arthroderma gypseum CBS 118893]
Length = 1211
Score = 89.4 bits (220), Expect = 5e-15, Method: Compositional matrix adjust.
Identities = 79/251 (31%), Positives = 121/251 (48%), Gaps = 35/251 (13%)
Query: 14 DSESSTPASSKGKKTSKSPAKSEDD---SPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDN 70
+S +ST + + + KS +SED+ P + R +S KR ++ S S+ D D+
Sbjct: 117 ESSTSTTPTRRARTVVKSYEESEDEDVIQPARRGARGRSQKRRRTGAHS-SDEDCFKPDD 175
Query: 71 GSEDEYVPPKAEVESESEHSSGEEELEESVEDPT--PSSSEAEVTPMKNGNKRGLSSKSG 128
ED+Y+ + + S GE + + + P+ PS E+ P G+
Sbjct: 176 EDEDKYMDDTDDFVVPDDDSEGEVKSSKKRKRPSKPPSKKESSSPPPIPGDD-------- 227
Query: 129 QPTKKPKLTAPST-----------PSTPSFPVSDTSETTPSTSGAQDWSH-----NHYQF 172
T+ P+ T+ ST P P P + SET PS + +H N Y +
Sbjct: 228 VDTEIPQCTSGSTQKWRYDPDNVEPYQPQKPRA-KSETRPSNKPKK--AHMTEPENRYPW 284
Query: 173 LHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKF 232
L I+D D+ HPDY+P+TLY+PP K +P Q+W IK + +D ++FFK GKF
Sbjct: 285 LA--KIMDMDKNPLGHPDYDPRTLYIPPLAWTKFSPFEKQYWEIKQKFWDTIVFFKKGKF 342
Query: 233 YELFHMDAVIG 243
YEL+ DA IG
Sbjct: 343 YELYENDATIG 353
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IG L FATHYHS+A P +A M D D
Sbjct: 1053 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLAAEFEGHPEIAARRMRIHVD---D 1109
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLYKL G+ SFG + A + GIP VV+ A Q E +++
Sbjct: 1110 AERRVTFLYKLEDGVAEGSFGMHCASMCGIPSKVVEGAEIAAKQWEHTSRMKE 1162
Score = 60.5 bits (145), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 43/146 (29%), Positives = 72/146 (49%), Gaps = 13/146 (8%)
Query: 246 ELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNII 305
E +KE+G L+ QL + P+++ LLK++E AFD +A + ++
Sbjct: 728 EYTMGLLKEAGSG--YGLIGQLIS--------AMPNLNGLLKFWETAFDRPKARESDILV 777
Query: 306 PKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYAS 365
P+ G+++E+D I+ +E +++ L C+ I + K+ Y LEVP K +
Sbjct: 778 PEEGIEEEFDASRKGIEQLEDDLEQVLHRTRKELKCSTIVFKDNGKE-IYQLEVPIKIKN 836
Query: 366 KAKSNHQRVATKKKNVENYVTPECRG 391
KS Q ATK+ V+ Y PE R
Sbjct: 837 IPKSWDQMSATKQ--VKRYYFPELRA 860
>gi|242051827|ref|XP_002455059.1| hypothetical protein SORBIDRAFT_03g003700 [Sorghum bicolor]
gi|241927034|gb|EES00179.1| hypothetical protein SORBIDRAFT_03g003700 [Sorghum bicolor]
Length = 1035
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/84 (46%), Positives = 56/84 (66%)
Query: 164 DWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDC 223
D + + +++L+P I DA+RR P P Y+ TL++PP+ L+K + Q+W IK + D
Sbjct: 152 DSARSKFEWLNPFAIRDANRRRPNDPLYDKSTLFIPPDALRKMSTSQKQYWNIKCKYMDV 211
Query: 224 VLFFKVGKFYELFHMDAVIGADEL 247
VLFFKVGKFYEL+ +DA IG E
Sbjct: 212 VLFFKVGKFYELYELDAEIGQKEF 235
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA ++ + C +FATHYHS+ + P+V+ ++M+ + R+D
Sbjct: 859 RGTSTFDGYAIAYAVFRHLVERVRCRQLFATHYHSLTKEFASHPHVSLQHMACMFKPRSD 918
Query: 449 GIDT--IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
G + FLY+L G CP+S+G VA +AGIP+ +V+ + M ++
Sbjct: 919 GNGQKELTFLYRLTSGACPESYGLQVATMAGIPKSIVENASVAGQVMRSK 968
>gi|34481396|emb|CAC79990.1| sperm protein [Homo sapiens]
Length = 328
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 54/146 (36%), Positives = 81/146 (55%), Gaps = 5/146 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYH ++RRL + +M+ +E++
Sbjct: 185 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHYISRRLFSKCCCGLGHMACMVENECE 244
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + +LF +
Sbjct: 245 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFEKMNQSLRLF--R 302
Query: 507 FASLVKSGEKVDVEELQKALESVKSF 532
L VD E + K L +K
Sbjct: 303 EVCLASERSTVDREAVHKLLTLIKEL 328
>gi|356522732|ref|XP_003530000.1| PREDICTED: DNA mismatch repair protein Msh6-2-like [Glycine max]
Length = 1079
Score = 89.0 bits (219), Expect = 6e-15, Method: Compositional matrix adjust.
Identities = 39/78 (50%), Positives = 53/78 (67%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
+++L P I DA+ R P +P Y+ TLY+PPE L K + Q+W++K + D +LFFKV
Sbjct: 210 FEWLDPSRIRDANGRRPDNPLYDRTTLYIPPEVLGKMSASQKQYWSVKCKYMDVLLFFKV 269
Query: 230 GKFYELFHMDAVIGADEL 247
GKFYEL+ MDA IG EL
Sbjct: 270 GKFYELYEMDADIGHKEL 287
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 37/102 (36%), Positives = 54/102 (52%), Gaps = 5/102 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA ++ + C +FATHYH + + P V ++M+ + ++D
Sbjct: 908 RGTSTFDGYAIAYAVFRHLIEKVNCRMLFATHYHPLTKEFASHPRVIMQHMACAFNSKSD 967
Query: 449 GIDT----IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
+VFLY+L G CP+S+G VA +AGIPE V
Sbjct: 968 THSMRDQELVFLYRLASGPCPESYGLQVALMAGIPEKTVNIA 1009
>gi|225445280|ref|XP_002281165.1| PREDICTED: DNA mismatch repair protein Msh6-2 [Vitis vinifera]
Length = 1122
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 68/118 (57%), Gaps = 15/118 (12%)
Query: 131 TKKPKLTAPSTPSTPSFP-VSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHP 189
+K+ KL ST ++ VSDT+ + +++L P DA+RR P
Sbjct: 213 SKRLKLLQNSTTGNKNYGEVSDTT--------------SKFEWLDPSRKRDANRRRPGDA 258
Query: 190 DYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL 247
Y+ +TLY+PP+ L+K + Q+W+IK Q D VLFFKVGKFYEL+ +DA IG EL
Sbjct: 259 LYDKRTLYIPPDALQKMSASQKQYWSIKCQYMDVVLFFKVGKFYELYELDAEIGHKEL 316
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYI----ED 444
RGT T DG IA ++ + C +FATHYH + + P+V ++M+ +
Sbjct: 941 RGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHPLTKEFASHPHVTLQHMACTFNLKGE 1000
Query: 445 KRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
K + G +VFLY+L G CP+S+G VA +AG+P++VV+ +T M+
Sbjct: 1001 KSSGGEQELVFLYQLTSGACPESYGLQVALMAGVPKEVVEAASTAGRMMK 1050
>gi|297738843|emb|CBI28088.3| unnamed protein product [Vitis vinifera]
Length = 1126
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 68/118 (57%), Gaps = 15/118 (12%)
Query: 131 TKKPKLTAPSTPSTPSF-PVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHP 189
+K+ KL ST ++ VSDT+ + +++L P DA+RR P
Sbjct: 215 SKRLKLLQNSTTGNKNYGEVSDTT--------------SKFEWLDPSRKRDANRRRPGDA 260
Query: 190 DYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL 247
Y+ +TLY+PP+ L+K + Q+W+IK Q D VLFFKVGKFYEL+ +DA IG EL
Sbjct: 261 LYDKRTLYIPPDALQKMSASQKQYWSIKCQYMDVVLFFKVGKFYELYELDAEIGHKEL 318
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 62/110 (56%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYI----ED 444
RGT T DG IA ++ + C +FATHYH + + P+V ++M+ +
Sbjct: 945 RGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHPLTKEFASHPHVTLQHMACTFNLKGE 1004
Query: 445 KRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
K + G +VFLY+L G CP+S+G VA +AG+P++VV+ +T M+
Sbjct: 1005 KSSGGEQELVFLYQLTSGACPESYGLQVALMAGVPKEVVEAASTAGRMMK 1054
>gi|357511353|ref|XP_003625965.1| DNA mismatch repair protein Msh6-1 [Medicago truncatula]
gi|355500980|gb|AES82183.1| DNA mismatch repair protein Msh6-1 [Medicago truncatula]
Length = 1312
Score = 89.0 bits (219), Expect = 7e-15, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 65/109 (59%), Gaps = 1/109 (0%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA LE ++ + C +F+THYH +A ++P V +M+ N+
Sbjct: 1147 RGTSTSDGQAIAESVLEHLVRSVQCRGLFSTHYHRLAIDYLKDPKVCLAHMACQVGSGNE 1206
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARH 497
G+D + FLY+L G CPKS+G NVA LAG+P V++ + + EA +
Sbjct: 1207 GLDEVTFLYRLSAGACPKSYGVNVARLAGLPTSVLQKADAKSREFEATY 1255
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 35/68 (51%), Positives = 48/68 (70%)
Query: 186 PKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGAD 245
P +Y+ +TLY+PP+F++ + QWW KS++ D VLFFK+GKFYELF MDA +GA
Sbjct: 316 PGDENYDSRTLYLPPDFVRNLSGGQKQWWEFKSKHMDKVLFFKMGKFYELFEMDAHVGAK 375
Query: 246 ELACSYMK 253
EL YM+
Sbjct: 376 ELELQYMR 383
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 43/117 (36%), Positives = 64/117 (54%), Gaps = 2/117 (1%)
Query: 274 TPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLR 333
TP PD+S L +F++AFD EA+++G IIP GVDKEYD + IE + +L+
Sbjct: 831 TPGKGLPDVSMDLNHFKDAFDWVEANNSGRIIPHEGVDKEYDSAGKAVNEIESSLLDHLK 890
Query: 334 TQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
Q G T I S + Y+LEVP + +++R ++KK V Y TP+ +
Sbjct: 891 EQRKLLGSTSI-SYVGIGKDTYLLEVPENLSQNIPRDYERRSSKKGFVR-YWTPDIK 945
>gi|20152859|gb|AAM13399.1| MutS homolog 7 [Triticum aestivum]
Length = 1160
Score = 88.6 bits (218), Expect = 8e-15, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 57/78 (73%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
+++L+P +I DA++R P P Y+ +TL++PP+ L+K + Q+W+IK + D +LFFKV
Sbjct: 303 FEWLNPLNIRDANKRRPDDPLYDKRTLFIPPDALRKMSTSQKQYWSIKCKYMDVLLFFKV 362
Query: 230 GKFYELFHMDAVIGADEL 247
GKFYEL+ +DA IG EL
Sbjct: 363 GKFYELYEVDAEIGQKEL 380
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 3/110 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA + Q+ C +FATHYH + + P+V+ ++M+ + R+
Sbjct: 991 RGTSTFDGYAIAYAVFRHLVEQVRCRLLFATHYHPLTKEFASHPHVSLQHMACMLRPRSG 1050
Query: 449 GIDT--IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
G + FLY+LV G P+S+G VA +AGIP+ +V+ M++R
Sbjct: 1051 GNGEMELTFLYRLVSGASPESYGLQVATMAGIPKSIVEKAAVAGEMMKSR 1100
>gi|147852830|emb|CAN79520.1| hypothetical protein VITISV_034626 [Vitis vinifera]
Length = 1090
Score = 88.6 bits (218), Expect = 9e-15, Method: Compositional matrix adjust.
Identities = 48/118 (40%), Positives = 68/118 (57%), Gaps = 15/118 (12%)
Query: 131 TKKPKLTAPSTPSTPSF-PVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHP 189
+K+ KL ST ++ VSDT+ + +++L P DA+RR P
Sbjct: 213 SKRLKLLQNSTTGNKNYGEVSDTT--------------SKFEWLDPSRKRDANRRRPGDA 258
Query: 190 DYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL 247
Y+ +TLY+PP+ L+K + Q+W+IK Q D VLFFKVGKFYEL+ +DA IG EL
Sbjct: 259 LYDKRTLYIPPDALQKMSASQKQYWSIKCQYMDVVLFFKVGKFYELYELDAEIGHKEL 316
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYI----ED 444
RGT T DG IA ++ + C +FATHYH + + P+V ++M+ +
Sbjct: 909 RGTSTFDGYAIAYAVFRHLVEKVNCRLLFATHYHPLTKEFASHPHVTLQHMACTFNLKGE 968
Query: 445 KRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
K + G +VFLY+L G CP+S+G VA +AG P++VV+ +T M+
Sbjct: 969 KSSGGEQELVFLYQLTSGACPESYGLQVALMAGXPKEVVEAASTAGRMMK 1018
>gi|378726093|gb|EHY52552.1| DNA mismatch repair protein MSH6 [Exophiala dermatitidis
NIH/UT8656]
Length = 1250
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 78/286 (27%), Positives = 121/286 (42%), Gaps = 74/286 (25%)
Query: 16 ESSTPASSKG--KKTSKSPAKSEDDSPVTKR--PRRKSAKRVKSAIQSDSEPDD------ 65
++S PA++KG S ++ +T R P R++ K+ I+SDSE D
Sbjct: 94 KASLPAAAKGLLSPVSTDEGQTNGVEELTARGTPSRRAKKKAVRYIESDSEGTDNDDDVF 153
Query: 66 --------------MLQDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAE 111
L D+ ED Y E E+ + E+E ++ + P SE +
Sbjct: 154 KPTPVGRSRRTKRRRLSDSAEEDLY---------EQENDAAEQEDDDMDDFIAPDDSEDD 204
Query: 112 VTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHN--- 168
+ P + KR QP + K+++ TP+ + + E +S AQ W+++
Sbjct: 205 I-PRPSKRKR-----PSQPASR-KVSSHFTPTADNVDIDMDLEAAEGSSTAQQWAYDPAN 257
Query: 169 ------------------------HYQFLHPDH-------ILDADRRSPKHPDYNPKTLY 197
P+ I D DR P HPDY+P+TLY
Sbjct: 258 PQPLQARSSNIPSRKPGGQDGKKQKAHMTEPEQRHAWLEDIRDIDRNPPGHPDYDPRTLY 317
Query: 198 VPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
+PP K +P Q+W IK + +D ++FFK GKFYEL+ DA IG
Sbjct: 318 IPPMAWTKFSPFEKQYWEIKQKLWDTIVFFKKGKFYELYENDATIG 363
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT ++DG +A+ L +GCL FATHYHS++ + P + + M + D D
Sbjct: 1071 RGTSSHDGVAVAQAVLHHLASHVGCLGFFATHYHSLSAEFKGHPEIEPQRMKILVD---D 1127
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ FLYKL G+ SFG + A + GIP VV A + E
Sbjct: 1128 EQRRVTFLYKLERGVAEGSFGMHCASMCGIPARVVDRAQEAAREWE 1173
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 65/127 (51%), Gaps = 9/127 (7%)
Query: 269 NYESQTPSG----CFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSI 324
N +S++ G PD+ LKY+ +AFD +A G + P+ G+++++D D I +I
Sbjct: 744 NLDSESVIGQLITAMPDLQPHLKYWMDAFDRTKAKETGILEPERGIEEDFDNSKDTIDAI 803
Query: 325 EKEIQTYLRTQCAHFGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVEN 383
+ E L FG + I Y ++ K+ + LEVP K K+ Q ATK+ V+
Sbjct: 804 QDEFNVLLHKWRKEFGSSGICYRDSGKEIMQ--LEVPLKVKGIPKNWDQMSATKQ--VKR 859
Query: 384 YVTPECR 390
Y PE R
Sbjct: 860 YYFPELR 866
>gi|357136621|ref|XP_003569902.1| PREDICTED: DNA mismatch repair protein Msh6-2-like [Brachypodium
distachyon]
Length = 1232
Score = 88.2 bits (217), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 56/78 (71%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
+++L+P +I D ++R P+ P Y+ +TL++PP+ L+K + Q+WT K + D VLFFKV
Sbjct: 375 FEWLNPLNIRDGNKRRPEDPLYDKRTLFIPPDALRKMSTSQKQYWTTKCKYMDVVLFFKV 434
Query: 230 GKFYELFHMDAVIGADEL 247
GKFYEL+ +DA IG EL
Sbjct: 435 GKFYELYEVDAEIGQKEL 452
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 37/107 (34%), Positives = 60/107 (56%), Gaps = 4/107 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN- 447
RGT T DG IA ++ + C +FATHY + + P+V ++M+ + ++
Sbjct: 1063 RGTSTFDGYAIAYAVFRHLVERVRCRLLFATHYRPLTKEFASHPHVILQHMACMLRPKSG 1122
Query: 448 -DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQM 493
+G I FLY+L G P+S+G VA +AG+P+ +V+ +VA QM
Sbjct: 1123 SNGDKEITFLYRLTAGASPESYGLQVATMAGLPKSIVE-KASVAGQM 1168
>gi|209876662|ref|XP_002139773.1| MutS domain-containing III family protein [Cryptosporidium muris
RN66]
gi|209555379|gb|EEA05424.1| MutS domain-containing III family protein [Cryptosporidium muris
RN66]
Length = 1210
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 61/188 (32%), Positives = 87/188 (46%), Gaps = 19/188 (10%)
Query: 330 TYLRTQC-----AHFGCTV--------IYSEAQKKQKKY--VLEVPSKYASKAKSNHQRV 374
T LR C AH GC V + + Y +LE S + + + +
Sbjct: 981 TVLRQTCIAVIMAHIGCFVPASKCSLTLVDRIFTRIGAYDSILEAKSTFLVELEETATIL 1040
Query: 375 ATKKKNVENYVTPECRGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPN 433
+N V RGT T DG I TLE I C +F+TH H + + E+P+
Sbjct: 1041 KHATRNSLVVVDELGRGTSTFDGTAICVATLEYISHHIQCRCLFSTHLHLLCQEFSEDPS 1100
Query: 434 VAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQM 493
+ +M K + TI FLYK V GICPKS+G NVA+LAGIP +V+ +A ++
Sbjct: 1101 IIAFHMDL---KLSQDTKTITFLYKFVRGICPKSYGMNVAQLAGIPAEVIDKAVNLAGEV 1157
Query: 494 EARHNLRQ 501
E N+ +
Sbjct: 1158 ELCTNILR 1165
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 54/92 (58%), Gaps = 7/92 (7%)
Query: 172 FLHPDHILDADRRSPKHPDYNPKTLYVP---PEFLKKQ----TPCMGQWWTIKSQNFDCV 224
+L I D++ R P P+YNP T++VP + K++ TP M Q+W +K +FD +
Sbjct: 239 WLQLTKIKDSNGRYPTDPNYNPSTVWVPDSNSKLAKEEKHHFTPAMQQYWELKKDHFDKL 298
Query: 225 LFFKVGKFYELFHMDAVIGADELACSYMKESG 256
+FFK+GKFYELF++DA + +M G
Sbjct: 299 VFFKIGKFYELFYIDACLSQRLCDLRWMSGDG 330
>gi|242000966|ref|XP_002435126.1| sperm protein, putative [Ixodes scapularis]
gi|215498456|gb|EEC07950.1| sperm protein, putative [Ixodes scapularis]
Length = 401
Score = 87.8 bits (216), Expect = 1e-14, Method: Compositional matrix adjust.
Identities = 44/97 (45%), Positives = 61/97 (62%), Gaps = 4/97 (4%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA +++ +I C T+F+THYH + +PNV +M+ + + N+
Sbjct: 305 RGTSTHDGMSIAHAVVKELSTKIHCRTLFSTHYHHLVEGFTSDPNVYLGHMACMVENENE 364
Query: 449 G---IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDV 482
+TIVFLYK G CPKS+GFN A+LAGIP DV
Sbjct: 365 DDPTQETIVFLYKFARGACPKSYGFNAAKLAGIPPDV 401
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 31/96 (32%), Positives = 52/96 (54%), Gaps = 3/96 (3%)
Query: 295 HKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKK 354
H+EA G + P GVDK+YD+ M +K+ +E++ YL TQC HF C Y K +
Sbjct: 1 HEEAKKNGKVTPSKGVDKDYDDAMRRVKAATRELEDYLETQCRHFKCKATYHGTGK--NR 58
Query: 355 YVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
+ +EVP + A + ++ + ++K + Y T +
Sbjct: 59 FQIEVPESASRLAGAGYE-LQGQRKGFKRYWTSRVK 93
>gi|218187626|gb|EEC70053.1| hypothetical protein OsI_00652 [Oryza sativa Indica Group]
Length = 1216
Score = 87.8 bits (216), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 56/82 (68%)
Query: 166 SHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVL 225
+ + +++L+P +I DA+RR P Y+ TL++PP+ L+K + Q+W IK + D VL
Sbjct: 363 ARSKFEWLNPSNIRDANRRRLADPLYDKTTLFIPPDALRKMSTSQKQYWNIKCKYMDVVL 422
Query: 226 FFKVGKFYELFHMDAVIGADEL 247
FFKVGKFYEL+ +DA IG EL
Sbjct: 423 FFKVGKFYELYEVDAEIGQKEL 444
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA ++ + C +FATHYH + + P+V ++M+ + RN
Sbjct: 1047 RGTSTFDGYAIAYAVFRHLVEAVRCRLLFATHYHPLTKEFASHPHVTLQHMACMLKPRNG 1106
Query: 449 GIDT---IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
G + FLY+L G CP+S+G VA +AG+P +V+ + M ++
Sbjct: 1107 GDGGEKELTFLYRLTSGACPESYGLQVATMAGLPRSIVERASAAGEMMRSK 1157
>gi|242044644|ref|XP_002460193.1| hypothetical protein SORBIDRAFT_02g024370 [Sorghum bicolor]
gi|241923570|gb|EER96714.1| hypothetical protein SORBIDRAFT_02g024370 [Sorghum bicolor]
Length = 638
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 81/150 (54%), Gaps = 2/150 (1%)
Query: 353 KKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFL-QI 411
+ +++ S + + + +++ KN + RGT T+DG IA LE + Q+
Sbjct: 433 RDHIMAGQSTFLVELEETASVLSSATKNSLVVLDELGRGTSTSDGQAIAASVLEYLVHQV 492
Query: 412 GCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFN 471
CL +F+THYH +A R++ V+ +M+ + G++ + FLY+L PG CPKS+G N
Sbjct: 493 QCLGLFSTHYHRLAME-RKDTKVSLCHMACQVVEGEGGLEEVTFLYRLTPGACPKSYGVN 551
Query: 472 VAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
VA LAGIP V++ + EA + R
Sbjct: 552 VARLAGIPTSVLQRANEKSSDFEANYGKRH 581
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 48/144 (33%), Positives = 66/144 (45%), Gaps = 10/144 (6%)
Query: 248 ACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPK 307
ACS + CT S L L +P PD+S +L F +AFD EA G IIP
Sbjct: 134 ACSSISTLICTEGSQLNDLL------SPGKGLPDISSILDRFRDAFDWSEADRNGRIIPC 187
Query: 308 AGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFG-CTVIYSEAQKKQKKYVLEVPSKYASK 366
G D EYD I+ I+ ++ YL+ Q +V Y + K Y++EVP
Sbjct: 188 EGCDPEYDATCYAIEEIKSSLKEYLKEQRKLLRPASVNYVDVGKDM--YLIEVPESLGGS 245
Query: 367 AKSNHQRVATKKKNVENYVTPECR 390
N++ +T KK Y TPE +
Sbjct: 246 VPRNYELQST-KKGFFRYWTPELK 268
>gi|167536029|ref|XP_001749687.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163771835|gb|EDQ85496.1| predicted protein [Monosiga brevicollis MX1]
Length = 1131
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 65/199 (32%), Positives = 95/199 (47%), Gaps = 29/199 (14%)
Query: 74 DEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEA--EVTPMKNGNKRGL--SSKSGQ 129
DEY P E+E+ S E+L++ E P S+ E P +G +R + +
Sbjct: 216 DEYCPDDEELEAVKREES--EDLDQDSESEVPDESDGVLESEPESDGERRSAAKTRRKRA 273
Query: 130 PTKKPKLTAPSTPSTPSFPVSD-------TSETTPST-------------SGAQDWSH-N 168
P+ K P +P+ S+ TS T P T +GA S+
Sbjct: 274 PSSASKTQKAIKPFSPTSAHSELDNFAARTSRTPPKTVAPKSNGPLSQSEAGAGATSNAG 333
Query: 169 HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFK 228
++FL + D+ RR P P+Y+P TL++P + +K +P Q+WTIK NFD +LFFK
Sbjct: 334 RFRFLA--DLRDSHRRKPSDPNYDPTTLHIPTQEFEKLSPFEKQYWTIKKDNFDTILFFK 391
Query: 229 VGKFYELFHMDAVIGADEL 247
GKFYEL+ DA I E
Sbjct: 392 KGKFYELYEQDAFIANREF 410
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 52/95 (54%), Gaps = 18/95 (18%)
Query: 393 GTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIED---KRNDG 449
G ND + R C T+FATHYH + + EP VA M+ I D KR+
Sbjct: 1026 GANDNIMAGR----------CRTLFATHYHMLTEEFQPEPLVANFNMACIVDEGSKRD-- 1073
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
+ FLYKLV G+C KS+G NVA +AG+ + V++
Sbjct: 1074 ---VTFLYKLVQGVCSKSYGMNVAAMAGLSDAVIQ 1105
>gi|115434900|ref|NP_001042208.1| Os01g0180600 [Oryza sativa Japonica Group]
gi|55296256|dbj|BAD68036.1| putative DNA mismatch repair protein [Oryza sativa Japonica Group]
gi|55296304|dbj|BAD68084.1| putative DNA mismatch repair protein [Oryza sativa Japonica Group]
gi|113531739|dbj|BAF04122.1| Os01g0180600 [Oryza sativa Japonica Group]
Length = 1224
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 38/82 (46%), Positives = 56/82 (68%)
Query: 166 SHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVL 225
+ + +++L+P +I DA+RR P Y+ TL++PP+ L+K + Q+W IK + D VL
Sbjct: 363 ARSKFEWLNPSNIRDANRRRLADPLYDKTTLFIPPDALRKMSTSQKQYWNIKCKYMDVVL 422
Query: 226 FFKVGKFYELFHMDAVIGADEL 247
FFKVGKFYEL+ +DA IG EL
Sbjct: 423 FFKVGKFYELYEVDAEIGQKEL 444
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/111 (33%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA ++ + C +FATHYH + + P+V ++M+ + RN
Sbjct: 1055 RGTSTFDGYAIAYAVFRHLVEAVRCRLLFATHYHPLTKEFASHPHVTLQHMACMLKPRNG 1114
Query: 449 GIDT---IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
G + FLY+L G CP+S+G VA +AG+P +V+ + M ++
Sbjct: 1115 GDGGEKELTFLYRLTSGACPESYGLQVATMAGLPRSIVERASAAGEMMRSK 1165
>gi|429328637|gb|AFZ80397.1| DNA mismatch repair protein, putative [Babesia equi]
Length = 1173
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 62/104 (59%), Gaps = 3/104 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG IA +LEK +I C +F TH+ V + +E NV +M+ D+ +
Sbjct: 1038 RGTSTFDGTAIAVASLEKISEINCRCIFTTHFQDVCKAAKEMYNVVMYHMAAKIDEESQN 1097
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQM 493
++ FLYKL+ GICP+S G +VA+LAGIP++V+ T +
Sbjct: 1098 VE---FLYKLIEGICPESQGLHVAKLAGIPKNVIDIARTASLNF 1138
Score = 82.0 bits (201), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 63/118 (53%), Gaps = 17/118 (14%)
Query: 152 TSETTPSTSGAQDWSHNHYQF---------LHPDHILDADRRSPKHPDYNPKTLYVPPEF 202
T + + + G +++ N+Y++ + P +I D D P +YNP TL++PP+
Sbjct: 243 TCKASTDSRGFKEYVENYYRYRISFLFPPWIDPSNIKDIDGNRPTDENYNPSTLWIPPKG 302
Query: 203 LK--------KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYM 252
K T CM QWW +K +FD +LFFK+GKFYELF+ DA I + +M
Sbjct: 303 HKWATEFKSCHYTECMQQWWKLKQSHFDSLLFFKMGKFYELFYHDACIIQSLCSLRWM 360
>gi|392866476|gb|EAS27907.2| DNA mismatch repair protein msh6 [Coccidioides immitis RS]
Length = 1221
Score = 87.4 bits (215), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 108/240 (45%), Gaps = 21/240 (8%)
Query: 17 SSTPASSKGKKTSKSPAKSEDDSPVTKRPRRKSA------KRVKSAIQSDSE---PDDML 67
S+TP S + KKT E+D V K P R+SA KR A D E PD+ +
Sbjct: 139 SATP-SRRAKKTVDYWESDEED--VVKPPTRRSAVGRANKKRRTVATSEDEEEFQPDESI 195
Query: 68 QDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPT----PSSSEAEVTPMKNGNKRGL 123
D D+++ P ES+ E + S PT P S+ + +
Sbjct: 196 GDFDDLDDFIVPD---ESDQEMRPSRKRKRSSNPKPTKPSTPISAPQDDMDVDLDIPNSA 252
Query: 124 SSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADR 183
S + + T P T T P+S S Y +L +ILD D+
Sbjct: 253 SGTAKKWTYDPNDTECRQHRTTLAPLSSKSLGKKKEKAHLTEPEKRYPWLA--NILDMDK 310
Query: 184 RSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
P HPDY+P+TLY+PP + +P Q+W IK + +D V+FFK GKFYEL+ DA IG
Sbjct: 311 NPPGHPDYDPRTLYIPPLAWSRFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIG 370
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI---EDK 445
RGT + DG +A+ L IG L FATHYHS+A P ++ M ED+
Sbjct: 1064 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLAAEFEGHPEISPRRMRIHVDEEDR 1123
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIH 505
R + FLYKL G+ SFG + A + GIP V++ A + E L++
Sbjct: 1124 R------VTFLYKLEDGVAEGSFGMHCASMCGIPTKVIETAEVAAKEWEHTSRLKESVER 1177
Query: 506 KFAS-LVKSGEKVDVEELQK 524
K S LV G D+ + K
Sbjct: 1178 KKGSGLVGLGWWSDIAWILK 1197
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 62/114 (54%), Gaps = 5/114 (4%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYL-RTQCA 337
PDM LL+Y++ AFD +A +G +PKAGV++++D I+ IE ++ L R +
Sbjct: 762 MPDMDGLLQYWKTAFDRVKAKDSGIFVPKAGVEEDFDASTQRIEEIEAKLDQLLKRVRRE 821
Query: 338 HFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRG 391
+IY + K + Y LEVP K + KS Q ATK+ + Y PE RG
Sbjct: 822 LNSSAIIYRDNGK--EIYQLEVPVKVRNIPKSWDQMSATKQ--AKRYYFPELRG 871
>gi|119180370|ref|XP_001241662.1| hypothetical protein CIMG_08825 [Coccidioides immitis RS]
Length = 1127
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 78/240 (32%), Positives = 108/240 (45%), Gaps = 21/240 (8%)
Query: 17 SSTPASSKGKKTSKSPAKSEDDSPVTKRPRRKSA------KRVKSAIQSDSE---PDDML 67
S+TP S + KKT E+D V K P R+SA KR A D E PD+ +
Sbjct: 139 SATP-SRRAKKTVDYWESDEED--VVKPPTRRSAVGRANKKRRTVATSEDEEEFQPDESI 195
Query: 68 QDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPT----PSSSEAEVTPMKNGNKRGL 123
D D+++ P ES+ E + S PT P S+ + +
Sbjct: 196 GDFDDLDDFIVPD---ESDQEMRPSRKRKRSSNPKPTKPSTPISAPQDDMDVDLDIPNSA 252
Query: 124 SSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADR 183
S + + T P T T P+S S Y +L +ILD D+
Sbjct: 253 SGTAKKWTYDPNDTECRQHRTTLAPLSSKSLGKKKEKAHLTEPEKRYPWLA--NILDMDK 310
Query: 184 RSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
P HPDY+P+TLY+PP + +P Q+W IK + +D V+FFK GKFYEL+ DA IG
Sbjct: 311 NPPGHPDYDPRTLYIPPLAWSRFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIG 370
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/140 (33%), Positives = 65/140 (46%), Gaps = 11/140 (7%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI---EDK 445
RGT + DG +A+ L IG L FATHYHS+A P ++ M ED+
Sbjct: 970 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLAAEFEGHPEISPRRMRIHVDEEDR 1029
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIH 505
R + FLYKL G+ SFG + A + GIP V++ A + E L++
Sbjct: 1030 R------VTFLYKLEDGVAEGSFGMHCASMCGIPTKVIETAEVAAKEWEHTSRLKESVER 1083
Query: 506 KFAS-LVKSGEKVDVEELQK 524
K S LV G D+ + K
Sbjct: 1084 KKGSGLVGLGWWSDIAWILK 1103
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 24/70 (34%), Positives = 40/70 (57%), Gaps = 1/70 (1%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYL-RTQCA 337
PDM LL+Y++ AFD +A +G +PKAGV++++D I+ IE ++ L R +
Sbjct: 762 MPDMDGLLQYWKTAFDRVKAKDSGIFVPKAGVEEDFDASTQRIEEIEAKLDQLLKRVRRE 821
Query: 338 HFGCTVIYSE 347
+IY +
Sbjct: 822 LNSSAIIYRD 831
>gi|223998298|ref|XP_002288822.1| MutS family [Thalassiosira pseudonana CCMP1335]
gi|220975930|gb|EED94258.1| MutS family [Thalassiosira pseudonana CCMP1335]
Length = 1099
Score = 87.0 bits (214), Expect = 2e-14, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 65/110 (59%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIG-CLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA T++ ++ C+T+FATHYHS+ + EP++ +M +ED
Sbjct: 990 RGTSTFDGTAIASATVKHLVERSQCVTLFATHYHSLLEDWKNEPSIRLGHMECIVEDDSE 1049
Query: 448 DGID---TIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
D + I FLY L G CPKSFG NVA LAG+P+DV++ V+ E
Sbjct: 1050 DDAEKRSNITFLYTLGEGPCPKSFGVNVARLAGLPDDVLQKAKLVSAAFE 1099
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 51/94 (54%), Gaps = 9/94 (9%)
Query: 167 HNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQ--------TPCMGQWWTIKS 218
HNH F D ++ +P HPDY+P+TL V L+++ +P QWW IK
Sbjct: 116 HNHLTFFTSGR-RDMNKHAPNHPDYSPRTLLVDYNELERKHKEIGGTLSPAQRQWWDIKC 174
Query: 219 QNFDCVLFFKVGKFYELFHMDAVIGADELACSYM 252
D VL FK GKFYE+FH DA +G L +YM
Sbjct: 175 HYADTVLLFKTGKFYEMFHDDADVGVAHLDFNYM 208
>gi|405960067|gb|EKC26017.1| DNA mismatch repair protein Msh3 [Crassostrea gigas]
Length = 1104
Score = 87.0 bits (214), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 86/152 (56%), Gaps = 9/152 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEP-NVAFEYMSYIEDK-- 445
RGT T+DG IA TL+ F+ +I LT+F THY +A + P NV +M +I ++
Sbjct: 953 RGTSTHDGVAIAYATLDYFISKIQSLTLFVTHYPILAEYEKLYPTNVGNFHMGFIVNETD 1012
Query: 446 ---RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
+D TI FLY+LV G+ +S+G NVA LAGI D+++ ++ Q+E R R+
Sbjct: 1013 TSASDDRKQTITFLYQLVQGMAARSYGLNVARLAGIHHDIIQGAELLSSQLEERIQKRRF 1072
Query: 503 FIHKFASLVKSGEKVDVEELQKALESVKSFES 534
+ F +L+ + ++ E K +KS+++
Sbjct: 1073 QLEAFQNLMSTTRDQELIEYTKTF--IKSYDA 1102
>gi|336109990|gb|AEI16763.1| mutS protein 6 [Xantusia vigilis]
Length = 347
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 34/57 (59%), Positives = 46/57 (80%)
Query: 197 YVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
+VP ++LK TP M +WW +KSQNFD V+F+KVGKFYEL+HMDAV+G ++L +MK
Sbjct: 1 FVPEDYLKNCTPGMRKWWELKSQNFDSVIFYKVGKFYELYHMDAVVGVNKLGLGFMK 57
>gi|303280413|ref|XP_003059499.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226459335|gb|EEH56631.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 1434
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 41/105 (39%), Positives = 58/105 (55%), Gaps = 1/105 (0%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG IA + + +G ++F+THYH +A + V +M E + G
Sbjct: 1275 RGTATTDGAAIAHAVVRHLVDLGARSLFSTHYHRLADDRAGDARVRLAHMG-CEVSGDRG 1333
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ + FLY L G CPKS+G NVA LAG+PE V+K + +ME
Sbjct: 1334 AERVTFLYALREGACPKSYGVNVARLAGLPESVLKLAAEKSAEME 1378
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 55/99 (55%), Gaps = 9/99 (9%)
Query: 164 DWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQ---------TPCMGQWW 214
D + +L P++ DA + P P Y+ TL +P +F K + +P QWW
Sbjct: 429 DRDRLQFPWLQPENRRDASGKRPNEPGYDKSTLLLPKDFPKCKDANGKPFTVSPGQAQWW 488
Query: 215 TIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
K+ +FD V+ FK+GKFYELF MDA +GA +L YMK
Sbjct: 489 RFKASHFDSVIMFKMGKFYELFEMDAHVGAADLGLMYMK 527
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYL---RTQ 335
P+++E L +FE AFD A ++G I PK G D D + + + + +L R +
Sbjct: 957 LPELTEALAHFERAFDWDGARASGRIEPKPGADAAVDAADARLAAADDALAEWLSDARKK 1016
Query: 336 CAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPE 388
V + A K +++EVP + +S+ + QR K+K E + +PE
Sbjct: 1017 IGGGKSEVAFVRANKDT--HLVEVPDRLSSRVPAGWQREG-KRKGFERFDSPE 1066
>gi|125563676|gb|EAZ09056.1| hypothetical protein OsI_31317 [Oryza sativa Indica Group]
Length = 1265
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 46/112 (41%), Positives = 66/112 (58%), Gaps = 2/112 (1%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA LE + ++ CL +F+THYH +A ++ V+ +M+ K
Sbjct: 1099 RGTSTSDGQAIAASVLEYLVHRVQCLGLFSTHYHRLAAE-NKDSKVSLCHMACEISKGEG 1157
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR 500
G++ + FLYKL PG CPKS+G NVA LAGIP V++ + EA + R
Sbjct: 1158 GLEEVTFLYKLTPGSCPKSYGVNVARLAGIPASVLQRANEKSSDFEASYGKR 1209
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 56/187 (29%), Positives = 85/187 (45%), Gaps = 19/187 (10%)
Query: 248 ACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPK 307
ACS + T S+LL L +P P +S +L +F +AFD EA G IIP
Sbjct: 762 ACSSISMLTSTDGSSLLNNLL-----SPGKGLPHVSSILDHFRDAFDWSEADRNGRIIPH 816
Query: 308 AGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFG-CTVIYSEAQKKQKKYVLEVPSKYASK 366
G D +YD I+ IE ++ YL+ Q +V Y + K Y+LEV S+
Sbjct: 817 EGCDPQYDAACIAIEEIESSLKKYLKEQRKLLSDSSVKYVDVGKDT--YLLEV-SENLRG 873
Query: 367 AKSNHQRVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFLQIGCLT-----VFATHY 421
+ H + + KK Y TPE + + +++ EK ++ C+ +F H
Sbjct: 874 SVPQHYELQSTKKGFYRYWTPEVKELISE----LSKAEAEKEAKLKCILQNLIQLFVGH- 928
Query: 422 HSVARRL 428
HS R+L
Sbjct: 929 HSKWRQL 935
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 40/74 (54%), Gaps = 18/74 (24%)
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
DA R P +P+Y+P+TL +P +FL T GQ +GKFYELF MD
Sbjct: 312 DAKGRRPGNPNYDPRTLSLPSQFLNSLTG--GQ----------------MGKFYELFEMD 353
Query: 240 AVIGADELACSYMK 253
A +GA EL YMK
Sbjct: 354 AHVGAKELDLQYMK 367
>gi|317038145|ref|XP_001401672.2| DNA mismatch repair protein Msh6 [Aspergillus niger CBS 513.88]
Length = 1210
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 75/246 (30%), Positives = 122/246 (49%), Gaps = 9/246 (3%)
Query: 4 DSKESPEKKGDSESSTPASSKGKKTS--KSPAKSEDDSPVTKRPRRKSA-KRVKSAIQSD 60
+++ESP K + ++++P+ K+ + +S ++ EDD RP R S KR K + +SD
Sbjct: 109 NAQESPNGKAELKTASPSRRAKKQVNYVESDSEGEDDDEKIFRPGRNSRNKRRKMSPESD 168
Query: 61 SEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNK 120
E +D S+DE +S+ E ++ S + + SSS V+ ++ +
Sbjct: 169 DEFNDGGDVGYSDDEMDDFIVADDSDEEAKPSKKRKRPSTQPKSKSSSLPPVSFEEDLDM 228
Query: 121 RGLSSKSGQPTK---KPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDH 177
+ +G K P+ + P P T +S TT + + Y +L +
Sbjct: 229 DIPDASAGTALKWTYDPESSEPRQPRTTPVTPKKSSGTTKQKAHVTE-PEQRYAWLA--N 285
Query: 178 ILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFH 237
I D D HP+Y+P+TLY+PP K +P Q+W IK + +D V+FFK GKFYEL+
Sbjct: 286 IRDIDGHPIGHPEYDPRTLYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYE 345
Query: 238 MDAVIG 243
DA IG
Sbjct: 346 NDATIG 351
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 14/146 (9%)
Query: 246 ELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNII 305
E S +KESG GE + Q SG PD++ELL+Y++ AFD +A ++
Sbjct: 723 EYTMSLLKESGSAGEGVI--------GQLISG-MPDLNELLEYWKTAFDRSKARENSILV 773
Query: 306 PKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCT-VIYSEAQKKQKKYVLEVPSKYA 364
PK GV++++D + I+ I +++++ L+ G + +IY + K + Y LEVP K
Sbjct: 774 PKPGVEEDFDSSQENIEQIHRDLESLLKRVRKELGSSAIIYKDNGK--EIYQLEVPIKVK 831
Query: 365 SKAKSNHQRVATKKKNVENYVTPECR 390
+ K+ Q ATK+ V+ Y PE R
Sbjct: 832 NIPKNWDQMSATKQ--VKRYYFPELR 855
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT + DG +A+ L IG L FATHYHS+A P +A + M +++D+
Sbjct: 1049 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLAAEFEGHPEIAPKRMRIHVDDEER 1108
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ-LFIHK 506
+ FLYKL G+ SFG + A + GIP+ V++ A Q E L++ L K
Sbjct: 1109 ----RVTFLYKLEDGVAEGSFGMHCAAMCGIPDKVIERAEVAAKQWEHTSRLKESLERRK 1164
Query: 507 FASLVKSGEKVDV 519
LV G D+
Sbjct: 1165 GGGLVGMGWWSDI 1177
>gi|189201826|ref|XP_001937249.1| DNA mismatch repair protein mutS [Pyrenophora tritici-repentis
Pt-1C-BFP]
gi|187984348|gb|EDU49836.1| DNA mismatch repair protein mutS [Pyrenophora tritici-repentis
Pt-1C-BFP]
Length = 1192
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 68/217 (31%), Positives = 105/217 (48%), Gaps = 15/217 (6%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEEL-EE 98
P+ R ++ KR + I+ DS+ D+ D ++ + + E + EEEL +
Sbjct: 120 PIANNARGRATKRQRVTIEDDSD-DEFGLDAATQKAMLEEEDEEDDFIVPDDSEEELASK 178
Query: 99 SVEDPTPSSSEAEVTPM--------KNGNKRGLSSKSGQPTKKPKLTAPSTPST--PSFP 148
+ P+ S + A+ +P K+ ++ G + + T + + P P P P
Sbjct: 179 KRKRPSASKARAKTSPASSPPIIEEKHDDEDGDVAMTSTSTAQQWIYDPENPMVFKPRAP 238
Query: 149 VSDTSETTPSTSGAQDWSHNHYQFLHP--DHILDADRRSPKHPDYNPKTLYVPPEFLKKQ 206
V T P + S + + HP H DADR HPDY+P+TLYVPP +K
Sbjct: 239 VQATKRD-PIKKIKERPSASEPETRHPWLAHQQDADRHPIDHPDYDPRTLYVPPHAFEKL 297
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
+ Q+W IKS+ +D V+FFK GKFYEL+ DA IG
Sbjct: 298 SAFEKQYWEIKSKWWDTVVFFKKGKFYELYEKDATIG 334
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 55/106 (51%), Gaps = 4/106 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L ++GC+ FATHY S+A+ P V + M D D
Sbjct: 1036 RGTSSYDGVAVAQAVLHDISTRVGCVGFFATHYRSLAKEFEFHPEVQNKRMRIHVD---D 1092
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+I FLYKL G+ SFG + A + GIP+ V++ A + E
Sbjct: 1093 DSKSITFLYKLEEGVAEGSFGMHCAAMCGIPKKVIENAEKAAREWE 1138
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 32/113 (28%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD+ L + +AFD A G +IP+ G+++++D + +++ + ++ L+
Sbjct: 735 MPDLGTSLAKWTSAFDRNIARKEGLLIPEPGIEEDFDNSQERVEACKADLDVLLKKARKE 794
Query: 339 FGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
G + Y++ K + Y LEVP K S Q AT K V Y +PE R
Sbjct: 795 LGSNAVQYNDIGK--EIYQLEVPKK-VKVPNSWDQMSATAK--VTRYYSPELR 842
>gi|242786643|ref|XP_002480846.1| DNA mismatch repair protein Msh6, putative [Talaromyces stipitatus
ATCC 10500]
gi|218720993|gb|EED20412.1| DNA mismatch repair protein Msh6, putative [Talaromyces stipitatus
ATCC 10500]
Length = 1183
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 74/245 (30%), Positives = 114/245 (46%), Gaps = 26/245 (10%)
Query: 14 DSESSTPASSKGKKTSKSPAKSEDDSPVTKRPRRKSAKRVKSAIQS-------------- 59
D +S+TP + K +S ++ DD RP+ S KR + AI+S
Sbjct: 96 DDDSATPQAKKKINYMESDSEGVDDDEEIFRPQ-PSRKRRRPAIESEDEFQDDGKDAPVS 154
Query: 60 DSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGN 119
D E DD + + SE++ P + + + + + S E+P S+ E + + +
Sbjct: 155 DDEMDDFVVADDSEEDARP---NKKKKKASAKLAQRNKASTEEPVRSADEDLDSDIPEAS 211
Query: 120 KRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWS-HNHYQFLHPDHI 178
G + K T P+ T P P S TT A + Y +L +I
Sbjct: 212 AGGTAQKW---TYDPESTEPRQERQQREPWS--GGTTKRKEKAHETEPEKRYPWLA--NI 264
Query: 179 LDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHM 238
+D DR P HPDY+P+ +Y+PP K +P Q+W IK + +D ++FFK GKFYEL+
Sbjct: 265 MDMDRNPPGHPDYDPRNIYIPPLAWTKFSPFEKQYWEIKQKFWDTIVFFKKGKFYELYEN 324
Query: 239 DAVIG 243
DA IG
Sbjct: 325 DATIG 329
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 46/160 (28%), Positives = 75/160 (46%), Gaps = 24/160 (15%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT + DG +A+ L +G L FATHYHS+A P + + M +++D+
Sbjct: 1028 RGTSSYDGVAVAQAVLHHIATHVGALGFFATHYHSLAAEFENHPEICPKRMRIHVDDEER 1087
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK- 506
++FLYKL G+ SFG + A + GIP V++ A Q E L + +
Sbjct: 1088 ----RVIFLYKLEDGVAEGSFGMHCASMCGIPNKVIENAEHAAKQWEHTSRLTESLERRK 1143
Query: 507 ------------FASLVKSGEKVDV-----EELQKALESV 529
A +++ G+ +V E L+KA+E++
Sbjct: 1144 GGGLVGLGWWSDVAWILREGDDANVSDRGLEILRKAIETL 1183
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD+ L+Y++ AFD +A G ++P+ G+++++D I+ I ++++ L+
Sbjct: 726 MPDLVSPLEYWKTAFDRLKAKENGILVPEQGIEEDFDASQATIEQIHRDLENLLKKSRRE 785
Query: 339 FGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRG 391
G T I K+ Y LEVP K + KS Q ATK+ V+ Y PE R
Sbjct: 786 LGSTAICYRDNGKE-IYQLEVPIKVKNVPKSWDQMSATKQ--VKRYYFPELRA 835
>gi|367008344|ref|XP_003678672.1| hypothetical protein TDEL_0A01290 [Torulaspora delbrueckii]
gi|359746329|emb|CCE89461.1| hypothetical protein TDEL_0A01290 [Torulaspora delbrueckii]
Length = 1225
Score = 86.7 bits (213), Expect = 3e-14, Method: Compositional matrix adjust.
Identities = 76/243 (31%), Positives = 111/243 (45%), Gaps = 34/243 (13%)
Query: 3 LDSKESPEKKGDSESSTPASSKGKKTSKSPAKSED-DSPVTKRPRRKSAKRVKSAIQSDS 61
LD K+ D E SS G++ K+ + +ED D+ + S K+ K I+ D
Sbjct: 123 LDRKQQEIDGDDDEEGNTLSSSGRRLKKNLSYAEDSDNSDNESTPSVSRKKRKMQIELDD 182
Query: 62 EPDDMLQDNGSEDEYVPPKA-EVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNK 120
E E+EYVP K E E + G+++L E +P + E T +K+
Sbjct: 183 E----------EEEYVPDKKDESEDDLVEEDGDDDLLALAESSSP---KPEKTVLKHTPS 229
Query: 121 RGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILD 180
R K K P + STP F G Q+ Y +L + D
Sbjct: 230 R--PQKPFAVKKSPSIRPLSTPKHQKF-------------GKQN--EERYHWLVDER--D 270
Query: 181 ADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDA 240
A R P Y+P+TLY+P K TP Q+W IKS+ +DC++FFK GKF+EL+ DA
Sbjct: 271 ASGRPITDPQYDPRTLYIPSSAWNKFTPFEKQYWEIKSKMWDCIVFFKKGKFFELYEKDA 330
Query: 241 VIG 243
++G
Sbjct: 331 MLG 333
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 56/114 (49%), Gaps = 4/114 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L I L FATHY S+ + + P V MS + D++
Sbjct: 1048 RGGSSSDGFAIAEGVLHHVATHIQSLGFFATHYASLGQSFKGHPQVRPLKMSIMVDEKTR 1107
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
T+ FLYKLV G SFG +VA + GI E++V A ME L +L
Sbjct: 1108 ---TVAFLYKLVDGQSEGSFGMHVASMCGIAEEIVDNAQVAAASMEHTSQLMKL 1158
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 38/125 (30%), Positives = 66/125 (52%), Gaps = 8/125 (6%)
Query: 267 LCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEK 326
L +Y S P F D+ + NAFD ++A + G ++P GV+ E+DE +D+IK +E
Sbjct: 725 LSDYVSSIPKSLFVDVEN----WSNAFDREKAVNEGILLPHRGVEPEFDESVDKIKELED 780
Query: 327 EIQTYLRTQCAHFGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYV 385
+++ L+ F C+ + Y + K + Y +EVP + SN ++A K+ + Y
Sbjct: 781 QLEDLLKAYKKQFKCSNLQYKDCGK--EIYTIEVPVSVSKYIPSNWVQMAA-NKSTKRYY 837
Query: 386 TPECR 390
+ E R
Sbjct: 838 SDEVR 842
>gi|430813559|emb|CCJ29106.1| unnamed protein product [Pneumocystis jirovecii]
Length = 320
Score = 86.7 bits (213), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/113 (40%), Positives = 66/113 (58%), Gaps = 10/113 (8%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS--YIEDKR 446
RGT T DG IA TL + +GCL F+THYHS+ + P +A YM+ EDK+
Sbjct: 164 RGTSTYDGLAIAYATLHQLSTYVGCLGFFSTHYHSLVKDFENHPKIAMYYMAAHVDEDKK 223
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA--FQMEARH 497
I FLY+L PG+ S+G NVA +AGIP++++K A F++ ++H
Sbjct: 224 K-----ITFLYELRPGMSSNSYGMNVAAMAGIPKEIIKNAEISAKKFEISSQH 271
>gi|308802850|ref|XP_003078738.1| DNA mismatch repair protein MSH3 (ISS) [Ostreococcus tauri]
gi|116057191|emb|CAL51618.1| DNA mismatch repair protein MSH3 (ISS) [Ostreococcus tauri]
Length = 1062
Score = 86.3 bits (212), Expect = 4e-14, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 67/109 (61%), Gaps = 4/109 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIG-CLTVFATHYHSVARRL--REEPNVAFEYMSYIE-DK 445
RGT T+DG IA TLE ++ C T+F THY SVAR + + N A + SY+E
Sbjct: 903 RGTSTHDGVAIAAATLEHLVRDAKCFTLFVTHYPSVARDVEAKHAANCASCFTSYVELPG 962
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+D + I FLYK+ PG+ +SFG NVA +AG+P +V++ + A ++E
Sbjct: 963 SSDDVPRIQFLYKITPGVAHRSFGLNVARMAGLPTEVIQSASVKASELE 1011
>gi|83315667|ref|XP_730891.1| G/T mismatch binding protein [Plasmodium yoelii yoelii 17XNL]
gi|23490759|gb|EAA22456.1| G/T mismatch binding protein-related [Plasmodium yoelii yoelii]
Length = 1261
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 82/145 (56%), Gaps = 9/145 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG IA TLE+ I C +F+THYH + ++ N++ +MS D D
Sbjct: 1097 RGTSSFDGTAIALSTLEQISDVIKCRCIFSTHYHLLVEEVKHNTNISNYHMSLSID---D 1153
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF--IHK 506
+ I+FLYK + GICPKSFG ++A+LAG+P+++++ + E N+ F I K
Sbjct: 1154 DQEKIIFLYKFIKGICPKSFGIHIAKLAGLPKEIIELAHEKSLLFE---NVTDEFCKIIK 1210
Query: 507 FASLVKSGEKVDVEELQKALESVKS 531
+ ++++S K + A+ S+ S
Sbjct: 1211 YKNIIRSLLKASDDTTLAAIASLHS 1235
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/86 (41%), Positives = 57/86 (66%), Gaps = 11/86 (12%)
Query: 168 NHYQF---LHPDHILDADRRSPKHPDYNPKTLYVPPE-----FLKKQ---TPCMGQWWTI 216
N ++F + P++I D + +P HP+Y+ T++ PP+ KQ TP M Q+W I
Sbjct: 251 NSFEFPKWIQPEYIRDINLNAPDHPNYDSSTIWTPPQDHQWAIEYKQAHYTPGMQQFWKI 310
Query: 217 KSQNFDCVLFFKVGKFYELFHMDAVI 242
KS+NFD ++FFK+G+FYE+F++DA I
Sbjct: 311 KSKNFDKIIFFKMGRFYEIFYIDACI 336
>gi|363751194|ref|XP_003645814.1| hypothetical protein Ecym_3519 [Eremothecium cymbalariae
DBVPG#7215]
gi|356889448|gb|AET38997.1| Hypothetical protein Ecym_3519 [Eremothecium cymbalariae
DBVPG#7215]
Length = 1233
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 73/213 (34%), Positives = 100/213 (46%), Gaps = 36/213 (16%)
Query: 31 SPAKSEDDSPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHS 90
SP KS KR R R + A+ DSE EDEYVP K E ++ EHS
Sbjct: 161 SPGKS---GSAMKRAR----TRTRVALSGDSE----------EDEYVPAKDESHAD-EHS 202
Query: 91 SGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVS 150
E+ E+ + S TP K+ R K + K L + S
Sbjct: 203 DYLEDNEDDADIFEFVSKPR--TPAKSVQSRAGVLKINREQKNRSLKSTSK--------- 251
Query: 151 DTSETTPSTSGAQDWSHNH---YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQT 207
E T S+ +++ N+ YQ+L + DA P DY+P++LYVPPE K T
Sbjct: 252 --MEITASSDKHTNFNKNNEQRYQWLVNER--DAAGHQPSDSDYDPRSLYVPPEAWAKFT 307
Query: 208 PCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDA 240
P Q+W IKS+ +DC++FFK GKF+EL+ DA
Sbjct: 308 PFEKQYWQIKSKMWDCIVFFKKGKFFELYEKDA 340
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 41/120 (34%), Positives = 56/120 (46%), Gaps = 10/120 (8%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDK--R 446
RG +NDG IA + L FATHY ++ + P + MS + D+ R
Sbjct: 1059 RGGSSNDGFAIAEGVFHHIATHVQSLGFFATHYGTLGQSFSHHPMIKPLKMSILVDEASR 1118
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
N + FLYKL+ G SFG +VA + GIP +V A +E H LR + HK
Sbjct: 1119 N-----VTFLYKLIEGQSEGSFGMHVASMCGIPRQIVDRAEKTADTLE--HTLRIMREHK 1171
Score = 45.8 bits (107), Expect = 0.061, Method: Compositional matrix adjust.
Identities = 27/103 (26%), Positives = 51/103 (49%), Gaps = 4/103 (3%)
Query: 289 FENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVI-YSE 347
+ +D +A G +IP GV++E+D+ +D I +E E + LR C+ I Y +
Sbjct: 754 WNKVYDRNKAVHEGALIPNKGVEQEFDKSIDRINELENEFSSMLREYKKELKCSSIQYKD 813
Query: 348 AQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
+ K + Y +E+P SN ++ + K+ + Y +P +
Sbjct: 814 SGK--EIYTIEIPISVCKNVPSNWTQMGS-NKSTKRYYSPTVQ 853
>gi|356529614|ref|XP_003533384.1| PREDICTED: DNA mismatch repair protein Msh6-2-like [Glycine max]
Length = 1116
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 38/78 (48%), Positives = 52/78 (66%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
+++L+P I DA+ R P Y+ TLY+PPE L K + Q+W++K + D +LFFKV
Sbjct: 247 FEWLNPSRIRDANGRRSNDPLYDRTTLYIPPEALGKMSASQKQYWSVKCKYMDVLLFFKV 306
Query: 230 GKFYELFHMDAVIGADEL 247
GKFYEL+ MDA IG EL
Sbjct: 307 GKFYELYEMDADIGHKEL 324
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA ++ + C +FATHYHS+ + P V ++M+ ++D
Sbjct: 945 RGTSTFDGYAIAYAVFRHLIEKVNCRMLFATHYHSLTKEFASHPRVIMQHMACAFKSKSD 1004
Query: 449 GIDT----IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+VFLY+L G CP+S+G VA +AGIPE V + + QM+
Sbjct: 1005 THSMRDQELVFLYRLASGPCPESYGLQVALMAGIPEKTVNIASKASQQMK 1054
>gi|71032141|ref|XP_765712.1| DNA repair protein [Theileria parva strain Muguga]
gi|68352669|gb|EAN33429.1| DNA repair protein, putative [Theileria parva]
Length = 1160
Score = 85.9 bits (211), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 47/110 (42%), Positives = 62/110 (56%), Gaps = 9/110 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG IA TLEK +IGC VF TH+ V NV+ +M+ D+
Sbjct: 1011 RGTSTFDGTAIAVATLEKISKIGCRCVFTTHFQDVCMFAESLSNVSMFHMAAKVDEETRS 1070
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
++ FLYKLVPG+CP S G +VA+LA +PE +++ MEAR L
Sbjct: 1071 VE---FLYKLVPGVCPDSHGMHVAKLARVPEHIIQNA------MEARMRL 1111
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 38/102 (37%), Positives = 57/102 (55%), Gaps = 17/102 (16%)
Query: 158 STSGAQDWSHNHYQF---------LHPDHILDADRRSPKHPDYNPKTLYVPP-------E 201
S+ G + + N+Y++ L P ++ D++ R P Y+ TL++PP E
Sbjct: 173 SSLGFRSYVENYYKYKGTFSFPPWLEPKNLRDSEGRKPLGDGYDSSTLWIPPKGHRWAHE 232
Query: 202 FLKKQ-TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVI 242
F T CM QWW +K +FD ++FFK+GKFYELF+ DA I
Sbjct: 233 FRSGHYTECMQQWWDVKRTHFDSLVFFKMGKFYELFYQDACI 274
>gi|425779081|gb|EKV17171.1| DNA mismatch repair protein Msh6, putative [Penicillium digitatum
PHI26]
Length = 1222
Score = 85.5 bits (210), Expect = 6e-14, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 115/274 (41%), Gaps = 66/274 (24%)
Query: 12 KGDSESSTPA-SSKGKKT---SKSPAKSEDDSPVTKRPRRKSAKRVKSAIQSDSEPDDML 67
KG + ST + S +GKK +S ++ EDD V RP RK + + +EPD
Sbjct: 114 KGSQQDSTMSPSRRGKKQVSYKESDSEGEDDDEVIFRPNRKDRVSGHATKRRRTEPD--- 170
Query: 68 QDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKS 127
SEDE+ E ++E+++ V S+ E+ N KR S
Sbjct: 171 ----SEDEF-------NEAGEGGYSDDEMDDFV---VADDSDEEIAKSYNKRKR----PS 212
Query: 128 GQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSG----AQDWSHN--------------- 168
Q +K A S P+ P PV D P G A+ W+ N
Sbjct: 213 TQSARKSASNASSVPA-PLPPVDDIDLDLPEGEGSAGTAKKWAFNPENTEPRKERAAVVS 271
Query: 169 -------------------HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPC 209
Y +L ++ D D HPDY+P+T+Y+PP K +P
Sbjct: 272 SKTASSAIKEKAHTKEPEQRYPWLA--NLKDIDGNPKGHPDYDPRTVYIPPLAWSKFSPF 329
Query: 210 MGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
Q+W IK + +D V+FFK GKFYEL+ DA IG
Sbjct: 330 EKQYWEIKQKFWDTVVFFKKGKFYELYENDATIG 363
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IG L FATHYHS+A P +A + M+ D D
Sbjct: 1061 RGTSSYDGVAVAQAVLHHIATHIGALGFFATHYHSLAAEFENHPEIAPKRMAIHVD---D 1117
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
+ FLYKL G+ SFG + A + GIP V++ A Q E L++ H+
Sbjct: 1118 VERRVTFLYKLENGVAEGSFGMHCASMCGIPSKVIECAENAAKQWEHTSRLKESLEHR 1175
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 20/165 (12%)
Query: 226 FFKVGKFYELFHMDAVIGADELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSEL 285
F +V + +E +D ++G +KES +++ QL + PD++ L
Sbjct: 723 FVRVLEGFE--QIDYIMG-------LLKESETGSGESIIGQL--------TAAMPDLASL 765
Query: 286 LKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIY 345
L Y++ AFD +A G ++P++GV++++D + I+ + +++ L+ G + I
Sbjct: 766 LGYWKTAFDRPKAKENGILVPESGVEEDFDNSQEIIEQLHRDLDAMLKKARQDLGSSAIC 825
Query: 346 SEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
K+ Y LEVP K + K +Q ATK+ V+ Y PE R
Sbjct: 826 YRDNGKE-IYQLEVPIKVKNIPKDWNQMSATKQ--VKRYYFPELR 867
>gi|425765631|gb|EKV04301.1| DNA mismatch repair protein Msh6, putative [Penicillium digitatum
Pd1]
Length = 1222
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 81/274 (29%), Positives = 115/274 (41%), Gaps = 66/274 (24%)
Query: 12 KGDSESSTPA-SSKGKKT---SKSPAKSEDDSPVTKRPRRKSAKRVKSAIQSDSEPDDML 67
KG + ST + S +GKK +S ++ EDD V RP RK + + +EPD
Sbjct: 114 KGSQQDSTMSPSRRGKKQVSYKESDSEGEDDDEVIFRPNRKDRVSGHATKRRRTEPD--- 170
Query: 68 QDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKS 127
SEDE+ E ++E+++ V S+ E+ N KR S
Sbjct: 171 ----SEDEF-------NEAGEGGYSDDEMDDFV---VADDSDEEIAKSYNKRKR----PS 212
Query: 128 GQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSG----AQDWSHN--------------- 168
Q +K A S P+ P PV D P G A+ W+ N
Sbjct: 213 TQSARKSASNASSVPA-PLPPVDDIDLDLPEGEGSAGTAKKWAFNPENTEPRKERAAVVS 271
Query: 169 -------------------HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPC 209
Y +L ++ D D HPDY+P+T+Y+PP K +P
Sbjct: 272 SKTASSAIKEKAHTKEPEQRYPWLA--NLKDIDGNPKGHPDYDPRTVYIPPLAWSKFSPF 329
Query: 210 MGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
Q+W IK + +D V+FFK GKFYEL+ DA IG
Sbjct: 330 EKQYWEIKQKFWDTVVFFKKGKFYELYENDATIG 363
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/118 (35%), Positives = 58/118 (49%), Gaps = 4/118 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IG L FATHYHS+A P +A + M+ D D
Sbjct: 1061 RGTSSYDGVAVAQAVLHHIATHIGALGFFATHYHSLAAEFENHPEIAPKRMAIHVD---D 1117
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
+ FLYKL G+ SFG + A + GIP V++ A Q E L++ H+
Sbjct: 1118 VERRVTFLYKLENGVAEGSFGMHCASMCGIPSKVIECAENAAKQWEHTSRLKESLEHR 1175
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 45/165 (27%), Positives = 82/165 (49%), Gaps = 20/165 (12%)
Query: 226 FFKVGKFYELFHMDAVIGADELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSEL 285
F +V + +E +D ++G +KES +++ QL + PD++ L
Sbjct: 723 FVRVLEGFE--QIDYIMG-------LLKESETGSGESIIGQL--------TAAMPDLASL 765
Query: 286 LKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIY 345
L Y++ AFD +A G ++P++GV++++D + I+ + +++ L+ G + I
Sbjct: 766 LGYWKTAFDRPKAKENGILVPESGVEEDFDNSQEIIEQLHRDLDAMLKKARQDLGSSAIC 825
Query: 346 SEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
K+ Y LEVP K + K +Q ATK+ V+ Y PE R
Sbjct: 826 YRDNGKE-IYQLEVPIKVKNIPKDWNQMSATKQ--VKRYYFPELR 867
>gi|169773547|ref|XP_001821242.1| DNA mismatch repair protein Msh6 [Aspergillus oryzae RIB40]
gi|238491536|ref|XP_002377005.1| DNA mismatch repair protein Msh6, putative [Aspergillus flavus
NRRL3357]
gi|83769103|dbj|BAE59240.1| unnamed protein product [Aspergillus oryzae RIB40]
gi|220697418|gb|EED53759.1| DNA mismatch repair protein Msh6, putative [Aspergillus flavus
NRRL3357]
gi|391869161|gb|EIT78363.1| mismatch repair ATPase MSH6 [Aspergillus oryzae 3.042]
Length = 1201
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 78/247 (31%), Positives = 113/247 (45%), Gaps = 29/247 (11%)
Query: 14 DSESSTPASSKGKKTS--KSPAKSEDDSPVTKRPRRKSAK---RVKSAIQSDSEPDDMLQ 68
D+++ +P+ K+ + +S ++ EDD RP RKS+K R K + +SD E +
Sbjct: 113 DAKTDSPSRRPKKQVNYFESDSEGEDDDEKIFRPGRKSSKISKRRKLSPESDDEFEQGGD 172
Query: 69 DNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPM--KNGNKRGLSSK 126
D G DE + V +S+ + + P P SS P ++ + +
Sbjct: 173 DAGYSDEDMDDFI-VADDSDEDVKTSKKRKRPTQPKPKSSSVPPVPSFEEDMDLNIPDAS 231
Query: 127 SGQPTK----------KPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPD 176
SG K + TAP+ +PS T P A W N
Sbjct: 232 SGSAMKWTYDPDSAEPRQNRTAPAKSKSPSGKKLKAHVTEPEQRYA--WLAN-------- 281
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
I D D SP HPDY+P+TLY+PP K +P Q+W IK + +D V+FFK GKFYEL+
Sbjct: 282 -IRDIDGHSPGHPDYDPRTLYIPPLAWAKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELY 340
Query: 237 HMDAVIG 243
DA IG
Sbjct: 341 ENDATIG 347
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 78/145 (53%), Gaps = 13/145 (8%)
Query: 246 ELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNII 305
E S +K+SG +GE ++ QL + PD++ELL+Y++ AFD +A G ++
Sbjct: 718 EYTVSLLKDSG-SGEG-VIGQLIS--------AMPDLNELLEYWKTAFDRTKARENGILV 767
Query: 306 PKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYAS 365
PK+GV++++D + I+ + E+ + L+ G T I K+ Y LEVP K +
Sbjct: 768 PKSGVEEDFDNSQEYIEELHNELDSLLKRVRRELGSTAICYRDNGKE-IYQLEVPIKVKN 826
Query: 366 KAKSNHQRVATKKKNVENYVTPECR 390
K+ Q ATK+ V+ Y PE R
Sbjct: 827 IPKNWDQMSATKQ--VKRYYFPELR 849
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 62/226 (27%), Positives = 95/226 (42%), Gaps = 32/226 (14%)
Query: 299 SSAGNIIP---KAGVDKEYDEVMDEIKSIEKEIQTYLRTQC-----AHFGCTVIYSEAQK 350
SS + IP K G D+ +++ + K T LR C A GC Y Q
Sbjct: 936 SSVEDFIPNDIKLGGDRANIDLLTGANAAGK--STVLRMTCVAVIMAQIGC---YLPCQS 990
Query: 351 KQKKYVLEVPSKYASK-----AKSNHQRVATKKKNVENYVTPEC--------RGTGTNDG 397
+ V + S+ + A+S ++ K + + TP RGT + DG
Sbjct: 991 ARLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILSEATPRSLVILDELGRGTSSYDG 1050
Query: 398 CVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRNDGIDTIVF 455
+A+ L IG L FATHYHS+A P + + M +++D+ + F
Sbjct: 1051 VAVAQAVLHHVATHIGALGFFATHYHSLAAEFEGHPEITPKRMKIHVDDEER----RVTF 1106
Query: 456 LYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
LYKL G+ SFG + A + GI V++ A Q E L++
Sbjct: 1107 LYKLEDGVAEGSFGMHCAAMCGISSKVIERAEVAAKQWEHTSRLKE 1152
>gi|212543423|ref|XP_002151866.1| DNA mismatch repair protein Msh6, putative [Talaromyces marneffei
ATCC 18224]
gi|210066773|gb|EEA20866.1| DNA mismatch repair protein Msh6, putative [Talaromyces marneffei
ATCC 18224]
Length = 1197
Score = 85.5 bits (210), Expect = 7e-14, Method: Compositional matrix adjust.
Identities = 73/252 (28%), Positives = 117/252 (46%), Gaps = 39/252 (15%)
Query: 14 DSESSTPASSKGKKTSKSPAKSE--DDSPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNG 71
D +S TP+ KK + + SE DD RP+ S KR + AI+S+ E QD+G
Sbjct: 110 DDQSLTPSRRTKKKVNYMESDSEGVDDDEEIFRPQ-PSRKRRRPAIESEDE----FQDDG 164
Query: 72 SEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPT 131
+ SE + ++ES ED P+ + + + + +P
Sbjct: 165 KDAHM----------SEDEMDDFIVDESEEDARPNKKRKKAAARPAQRSKSSTEEPVRPA 214
Query: 132 KK------PKLTAPSTPSTPSF------PVSDTSETTPSTSGA---QDWSH-----NHYQ 171
P+ TA T ++ P + + PS++G ++ +H Y
Sbjct: 215 DADFDLDIPEATAGGTAQKWTYDPENTEPRQERQQREPSSNGTTKRKEKAHETEPEKRYP 274
Query: 172 FLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGK 231
+L +I+D D+ P HPDY+P+ +Y+PP K +P Q+W IK + +D ++FFK GK
Sbjct: 275 WLA--NIMDMDKNPPGHPDYDPRNIYIPPLAWSKFSPFEKQYWEIKQKFWDTIVFFKKGK 332
Query: 232 FYELFHMDAVIG 243
FYEL+ DA IG
Sbjct: 333 FYELYENDATIG 344
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/160 (30%), Positives = 76/160 (47%), Gaps = 24/160 (15%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT + DG +A+ L +G L FATHYHS+A P ++ + M +++D+
Sbjct: 1042 RGTSSYDGVAVAQAVLHHIATHVGSLGFFATHYHSLAAEFENHPEISPKRMRIHVDDEER 1101
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK- 506
+ FLYKL G+ SFG + A + GIP V++ A Q E L + +
Sbjct: 1102 ----RVTFLYKLEDGVAEGSFGMHCASMCGIPNKVIENAENAAKQWEHTSRLTESLERRK 1157
Query: 507 ------------FASLVKSGEKVDV-----EELQKALESV 529
A +++ G+ VDV E L+KA+E++
Sbjct: 1158 GGGLVGLGWWSDVAWMLREGDNVDVSDRGLEILRKAIETL 1197
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 59/113 (52%), Gaps = 3/113 (2%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD+ L+Y++ AFD +A G ++P+ G+++++D I+ I ++++ L+
Sbjct: 740 MPDLVSPLEYWKTAFDRLKAKENGILVPEQGIEEDFDASQATIEQIHRDLENLLKQARRD 799
Query: 339 FGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRG 391
G T I K+ Y LEVP K + K+ Q ATK+ V+ Y PE R
Sbjct: 800 LGSTAICYRDNGKE-IYQLEVPIKVKNIPKTWDQMSATKQ--VKRYYFPELRA 849
>gi|322706947|gb|EFY98526.1| DNA mismatch repair protein msh3 [Metarhizium anisopliae ARSEF 23]
Length = 1101
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA+ LE + CLT+F THY ++AR + P V+ +M + K D
Sbjct: 960 RGTSTHDGAAIAQAVLEHVATETRCLTLFITHYQNLARVVEGLPGVSNLHMRFKAGKGPD 1019
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
G + I FLY++ G+ +S+G NVA LA IP+ V+ + +ME +R+L
Sbjct: 1020 GDEEITFLYEVGEGVAHRSYGLNVARLARIPKKVIDVAANKSGEMELDMRMRRL 1073
>gi|403217222|emb|CCK71717.1| hypothetical protein KNAG_0H03020 [Kazachstania naganishii CBS
8797]
Length = 1207
Score = 85.5 bits (210), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 79/260 (30%), Positives = 112/260 (43%), Gaps = 49/260 (18%)
Query: 11 KKGDSESSTPASSKGKKTSKSPAKSEDDSPVTKRPRR--KSAKRVKSAI---QSDSEPDD 65
K G + SS PA +KG +D V R S KR K + +SD E D
Sbjct: 80 KTGPTASSEPALAKGSYDDSVDLTGDDSDTVMASDDRPLSSLKRAKKPVNYAESDDEDDT 139
Query: 66 ML--------------QDNGSE-DEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEA 110
L +DN S+ D YVP K E ESE EH + E E+ +
Sbjct: 140 PLSSSIQRRKKAKLFTEDNDSDNDVYVPVKQEEESEDEHDNDPGVKSEGTEE-----DDD 194
Query: 111 EVTPMKNGNKRG----LSSKSGQPTKK---PKLTAPSTPSTPSFPVSDTSETTPSTSGAQ 163
++ ++ +KR + +S P KK P A S P +F
Sbjct: 195 DILALQGYSKRAPKPTVQKRSQLPIKKSPMPNKIASSPPGKKNF---------------N 239
Query: 164 DWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDC 223
+ Y +L + DA R P P+Y+P+TL +P K TP Q+W IK Q +DC
Sbjct: 240 KQNEERYHWLVNEK--DAQGRPPSDPEYDPRTLAIPSSAWGKFTPFEKQYWEIKCQMWDC 297
Query: 224 VLFFKVGKFYELFHMDAVIG 243
++FFK GKF+EL+ DA++
Sbjct: 298 IVFFKKGKFFELYEKDALLA 317
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/111 (31%), Positives = 50/111 (45%), Gaps = 4/111 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG + DG IA L + L FATHY ++ + P + M + D +
Sbjct: 1031 RGGSSGDGFAIAESVLHHVATHMQSLGFFATHYGTLGSHFKGHPQIRPMRMRILVD---E 1087
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
G + FLYKL G SFG +VA + IP +++ VA +ME L
Sbjct: 1088 GTRKVTFLYKLEDGASEGSFGMHVAAMCDIPRSIIETADKVAEKMEQTSQL 1138
Score = 55.8 bits (133), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 40/137 (29%), Positives = 67/137 (48%), Gaps = 15/137 (10%)
Query: 263 LLTQLCNYE---------SQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKE 313
LL L N+E +Q P + D+ + NA+D K+A+ IIP GV+ E
Sbjct: 695 LLKSLDNFELKGAIRTFANQCPKTLYQDVDSWV----NAYDRKKAAVENIIIPHRGVEVE 750
Query: 314 YDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQR 373
+D+ MDEI S+E E+ L F C ++ + K+ + +EVP+ + S+ +
Sbjct: 751 FDKSMDEINSLESELNEVLEQYKRKFKCKNLHFKDSGKE-IFTIEVPAAISKHIPSDWIQ 809
Query: 374 VATKKKNVENYVTPECR 390
+A K + Y +PE +
Sbjct: 810 MAA-NKTTKRYYSPEVQ 825
>gi|156057209|ref|XP_001594528.1| hypothetical protein SS1G_04335 [Sclerotinia sclerotiorum 1980]
gi|154702121|gb|EDO01860.1| hypothetical protein SS1G_04335 [Sclerotinia sclerotiorum 1980
UF-70]
Length = 1246
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 38/75 (50%), Positives = 49/75 (65%), Gaps = 2/75 (2%)
Query: 169 HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFK 228
Y++L + D DR P HPDY+P+TLY+PP K TP Q+W IK + +D +LFFK
Sbjct: 305 RYEWLANER--DIDRNPPGHPDYDPRTLYIPPMAFNKFTPFEKQYWEIKQKCWDTILFFK 362
Query: 229 VGKFYELFHMDAVIG 243
GKFYEL+ DA IG
Sbjct: 363 KGKFYELYERDATIG 377
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IGC+ FATHYHS+A P V + M+ D D
Sbjct: 1078 RGTSSYDGVSVAQAVLHHVASHIGCIGFFATHYHSLALEFDSHPEVINKRMAIEVD---D 1134
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
+++FLYKL G+ SFG + A + GIP VV A + E L
Sbjct: 1135 ESRSVLFLYKLENGVAEGSFGMHCASMCGIPRKVVDRAEVAAREWEYTSRL 1185
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 17/57 (29%), Positives = 38/57 (66%)
Query: 277 GCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLR 333
P++++ L++++NAFD K+A ++P+ GV++++D D I+ I +E+ + L+
Sbjct: 775 ATIPNLADPLQWWKNAFDRKKAKEDKILVPERGVEEDFDASQDRIEEIHQELASLLK 831
>gi|414876024|tpg|DAA53155.1| TPA: MUS2 protein [Zea mays]
Length = 1184
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
+++L+ I DA++R P P Y+ TL++PP+ L+K + Q+W IK + D VLFFKV
Sbjct: 329 FEWLNSFAIRDANKRRPNDPLYDKSTLFIPPDALRKMSTSQKQYWNIKCKYMDVVLFFKV 388
Query: 230 GKFYELFHMDAVIGADEL 247
GKFYEL+ +DA IG EL
Sbjct: 389 GKFYELYELDAEIGQKEL 406
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA ++ + C +FATHYHS+ + P+V+ ++M+ + R+D
Sbjct: 1016 RGTSTFDGYAIAYAVFRHLVERVRCRQLFATHYHSLTKEFASHPHVSLQHMACMFKPRSD 1075
Query: 449 GIDT--IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
G + FLY+L G CP+S+G VA +AGIP+ +V+ + M A+
Sbjct: 1076 GNGQKELTFLYRLTSGACPESYGLQVAAMAGIPKSIVEKASVAGQVMRAK 1125
>gi|4775578|emb|CAB42555.1| MUS2 protein [Zea mays]
Length = 1184
Score = 85.1 bits (209), Expect = 8e-14, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
+++L+ I DA++R P P Y+ TL++PP+ L+K + Q+W IK + D VLFFKV
Sbjct: 329 FEWLNSFAIRDANKRRPNDPLYDKSTLFIPPDALRKMSTSQKQYWNIKCKYMDVVLFFKV 388
Query: 230 GKFYELFHMDAVIGADEL 247
GKFYEL+ +DA IG EL
Sbjct: 389 GKFYELYELDAEIGQKEL 406
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA ++ + C +FATHYHS+ + P+V+ ++M+ + R+D
Sbjct: 1016 RGTSTFDGYAIAYAVFRHLVERVRCRQLFATHYHSLTKEFASHPHVSLQHMACMFKPRSD 1075
Query: 449 GIDT--IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
G + FLY+L G CP+S+G VA +AGIP+ +V+ + M A+
Sbjct: 1076 GNGQKELTFLYRLTSGACPESYGLQVAAMAGIPKSIVEKASVAGQVMRAK 1125
>gi|407928522|gb|EKG21378.1| hypothetical protein MPH_01370 [Macrophomina phaseolina MS6]
Length = 1185
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 53/158 (33%), Positives = 75/158 (47%), Gaps = 39/158 (24%)
Query: 123 LSSKSGQPTKKPKLTAP--STPSTPSFPVSDTSETT--PSTSGAQDWSHN---------- 168
+S K +P+ P AP S+P P+ PV D + ++S AQ W ++
Sbjct: 176 VSKKRKRPSAAPSRKAPKASSPPIPTSPVVDDDDVMMEGNSSTAQQWRYDPDSNNTSGVR 235
Query: 169 -----------------------HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKK 205
Y +L HI DADR HPDY+P+TLY+PP K
Sbjct: 236 PPPTVMKKKDGKKEKAYKTEPEQRYTWLA--HIQDADRNPLGHPDYDPRTLYIPPGAWSK 293
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
+ Q+W IKS+ +D ++FFK GKFYEL+ DA +G
Sbjct: 294 FSAFEKQYWEIKSKFWDTIVFFKKGKFYELYENDATVG 331
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT + DG +A+ L IGCL FATHYHS+A P +A + M+ +++DK
Sbjct: 1027 RGTSSYDGVAVAQSVLHHIATHIGCLGFFATHYHSLATEFSGHPEIAAKRMAIHVDDKER 1086
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLY+L G+ SFG + A + GI +++ A + E L++
Sbjct: 1087 ----RVTFLYRLEDGVAEGSFGMHCAAMCGINPRIIERAEVAAKEWEHTSRLKE 1136
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 64/112 (57%), Gaps = 3/112 (2%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD++ LK++ +AFD K+A G ++P+ GV++++D+ + ++S+ E++ L+
Sbjct: 725 MPDLAGSLKHWRDAFDRKKAKEDGILVPEPGVEEDFDQSQENVESVLAELEKLLKQYRRD 784
Query: 339 FGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
G T I + K+ Y LEVP K + KS Q +T K V+ Y +PE R
Sbjct: 785 LGSTAICYKDNGKE-IYQLEVPIKIKNVPKSWDQMSSTAK--VKRYYSPELR 833
>gi|388579806|gb|EIM20126.1| DNA mismatch repair protein Msh6 [Wallemia sebi CBS 633.66]
Length = 1017
Score = 85.1 bits (209), Expect = 9e-14, Method: Compositional matrix adjust.
Identities = 59/171 (34%), Positives = 92/171 (53%), Gaps = 22/171 (12%)
Query: 81 AEVESESEHSSGE---EELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLT 137
A VE ES+ E E++E+S + P P + E TP +K+ +P+
Sbjct: 8 APVEEESDDLIEEIDLEDIEKSKQAPKPKPAPKE-TP----------AKAARPS-----A 51
Query: 138 APSTPSTPSFPVSDTSE-TTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTL 196
A TPS + + +E T A+ + + + FLHP + D + HPDY+P TL
Sbjct: 52 AGRTPSGGNKSLLTKAERQVQQTKAAKKDAESPFMFLHPPY--DKYQNPIGHPDYDPHTL 109
Query: 197 YVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL 247
++PP++ K+ +P Q+W IK+ +FD +LFF+ GKFYEL+ DA+IG E
Sbjct: 110 HIPPKYWKEFSPFEKQFWEIKADHFDTILFFQKGKFYELYENDAIIGHREF 160
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 57/113 (50%), Gaps = 5/113 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T G IA L+ +GC +F+THY S+ PN+ +M+ + N
Sbjct: 858 RGTSTTQGIAIASAVLQHIASFLGC-CLFSTHYSSLGDFGSTHPNIKACHMA---SEVNS 913
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
I FLYKLV G+ S+G +VA+LAG+P VV VA + + L Q
Sbjct: 914 EKREIRFLYKLVEGVALDSYGHHVAKLAGVPLPVVVRAEQVATEYTEANKLEQ 966
>gi|322701080|gb|EFY92831.1| DNA mismatch repair protein msh3 [Metarhizium acridum CQMa 102]
Length = 1098
Score = 85.1 bits (209), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 66/114 (57%), Gaps = 1/114 (0%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA+ LE + CLT+F THY ++AR + P V+ +M + K D
Sbjct: 957 RGTSTHDGAAIAQAVLEHVATETRCLTLFITHYQNLARVVEGLPGVSNLHMKFKAGKGPD 1016
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
G + I FLY++ G+ +S+G NVA LA IP+ V+ + +ME +R+L
Sbjct: 1017 GDEEITFLYEVGEGVAHRSYGLNVARLARIPKKVIDVAANKSGEMELDMRMRRL 1070
>gi|219109807|ref|XP_002176657.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
gi|217411192|gb|EEC51120.1| predicted protein [Phaeodactylum tricornutum CCAP 1055/1]
Length = 1423
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 48/122 (39%), Positives = 65/122 (53%), Gaps = 16/122 (13%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA ++ + + CL++FATHYHS+ + NV +M I + +
Sbjct: 1294 RGTSTFDGTAIASSVVKHLVDRSKCLSLFATHYHSLLEEWKHNRNVRLGHMECIVE---N 1350
Query: 449 GI------------DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
GI TI FLY L G+CPKSFG NVA LAG+PEDV+ ++ + E
Sbjct: 1351 GITTSRPENEEKDESTITFLYTLGEGVCPKSFGINVARLAGLPEDVLSNAKRISSEFEQE 1410
Query: 497 HN 498
N
Sbjct: 1411 VN 1412
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 40/93 (43%), Positives = 53/93 (56%), Gaps = 7/93 (7%)
Query: 166 SHNHYQFLHPDHILDADRRSPKHPDYNPKTLYV-PPEFLK----KQTPCMGQWWTIKSQN 220
+HNH FL + DA R+P HPDY+ +TL V ++L T + QWW +K++
Sbjct: 333 AHNHLPFLQ--NPRDAQGRTPDHPDYDRRTLKVNSRDWLNVTGGNMTDAVQQWWDLKARY 390
Query: 221 FDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
D VL FK GKFYE+FH DA +G YMK
Sbjct: 391 ADTVLLFKTGKFYEMFHADADVGVQVCGLLYMK 423
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 44/163 (26%), Positives = 73/163 (44%), Gaps = 26/163 (15%)
Query: 256 GCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYD 315
G +S LL+++ + Q GCFP+M + L++F FD +A+ G P G+D YD
Sbjct: 952 GIEIQSGLLSKIVRFTDQ--GGCFPNMIQELEWFFENFDLDQAAK-GFFEPSRGIDDLYD 1008
Query: 316 EVMDEIKSIEKEIQ--------TYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKA 367
+ D I I+ E+ TYL+ + A + + ++KY +E+P+
Sbjct: 1009 QACDAIAHIQSELNDYKEEMCSTYLQPRSAARSSWKYINTKPESKEKYTIELPASV---- 1064
Query: 368 KSNHQRVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFLQ 410
RV +N++ RG+GT LE F+Q
Sbjct: 1065 -----RVP------DNFILKGKRGSGTKQMNRYRTAQLEHFVQ 1096
>gi|296418664|ref|XP_002838949.1| hypothetical protein [Tuber melanosporum Mel28]
gi|295634935|emb|CAZ83140.1| unnamed protein product [Tuber melanosporum]
Length = 1032
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 57/146 (39%), Positives = 75/146 (51%), Gaps = 18/146 (12%)
Query: 116 KNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSF-PVSDTSETTPSTS-------------G 161
++ KR S+ T P + P++ S F P SD+ TTP S G
Sbjct: 68 RDSKKRKKSNNDFHGTPSPTVKTPASASHFVFNPKSDS--TTPVFSATTPRPKPPAAPAG 125
Query: 162 AQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNF 221
+D Y +L I DAD P HPDY+P+TL+VPP K +P Q+W IKS+ +
Sbjct: 126 RKDRDEVRYFWLV--DIKDADGNPPDHPDYDPRTLFVPPSAWLKFSPFEKQYWEIKSRLY 183
Query: 222 DCVLFFKVGKFYELFHMDAVIGADEL 247
D V+FFK GKFYEL+ DA IG E
Sbjct: 184 DTVVFFKKGKFYELYEDDATIGHREF 209
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 37/95 (38%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L QIGCL FATHYHS+A P + + M D+ N
Sbjct: 879 RGTSSYDGVAVAQSVLHHVATQIGCLGFFATHYHSLASEFIGHPEIQPKRMQIHVDEEN- 937
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
I FLYKL G+ SFG + A + GI + ++
Sbjct: 938 --RDITFLYKLEAGVAEGSFGMHCAAMCGINKRII 970
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 64/115 (55%), Gaps = 7/115 (6%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKS-IEKEIQTYLRTQCA 337
PD+ LK +E AFD ++A S G ++P+ GV+ ++D D I+ I E+++ L +
Sbjct: 575 MPDLKRSLKQWEAAFDREKAKSQGLLVPERGVELDFDTSQDVIEDIINVELESLLTEYKS 634
Query: 338 HFGCTVI-YSEAQKKQKKYVLEVPSKYASKA-KSNHQRVATKKKNVENYVTPECR 390
I Y+++ K + Y++EVP K+A KS Q T+K V+ + +PE +
Sbjct: 635 SLKSRDIKYTDSGK--EIYLIEVPVKFARNIPKSWTQMSGTQK--VKRFYSPEVK 685
>gi|68072659|ref|XP_678243.1| DNA repair protein [Plasmodium berghei strain ANKA]
gi|56498644|emb|CAH98713.1| DNA repair protein, putative [Plasmodium berghei]
Length = 1090
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 62/98 (63%), Gaps = 4/98 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG IA TLE+ I C +F+THYH + ++ N++ +MS D D
Sbjct: 948 RGTSSFDGTAIALSTLEQISDTIKCRCIFSTHYHLLVEEVKHNTNISNYHMSLSID---D 1004
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
+ I+FLYK + GICPKSFG ++A+LAG+P+++++
Sbjct: 1005 DQEKIIFLYKFIKGICPKSFGIHIAKLAGLPKEIIELA 1042
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 56/90 (62%), Gaps = 8/90 (8%)
Query: 171 QFLHPDHILDADRRSPKHPDYNPKTLYVPPE-----FLKKQ---TPCMGQWWTIKSQNFD 222
+++ P +I D + P +P+Y+ T++ PP+ KQ TP M Q+W IKS+NFD
Sbjct: 136 KWIQPQYIRDINLNPPDNPNYDSSTIWTPPQDHQWAIEYKQAHYTPGMQQFWKIKSKNFD 195
Query: 223 CVLFFKVGKFYELFHMDAVIGADELACSYM 252
++FFK+G+FYE+F++DA I ++M
Sbjct: 196 KIIFFKMGRFYEIFYIDACIMHTICGLNWM 225
>gi|4775580|emb|CAB42556.1| MUS2 protein [Zea mays]
Length = 877
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 37/78 (47%), Positives = 53/78 (67%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
+++L+ I DA++R P P Y+ TL++PP+ L+K + Q+W IK + D VLFFKV
Sbjct: 22 FEWLNSFAIRDANKRRPNDPLYDKSTLFIPPDALRKMSTSQKQYWNIKCKYMDVVLFFKV 81
Query: 230 GKFYELFHMDAVIGADEL 247
GKFYEL+ +DA IG EL
Sbjct: 82 GKFYELYELDAEIGQKEL 99
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA + ++ C +FATHYHS+ + P+V+ ++M+ + R+D
Sbjct: 709 RGTSTFDGYAIAYAVFRHLVERVRCRQLFATHYHSLTKEFASHPHVSLQHMACMFKPRSD 768
Query: 449 GIDT--IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
G + FLY+L G CP+S+G VA +AGIP+ +V+ + M A+
Sbjct: 769 GNGQKELTFLYRLTSGACPESYGLQVAAMAGIPKSIVEKASVAGQVMRAK 818
>gi|406605450|emb|CCH43094.1| DNA mismatch repair protein [Wickerhamomyces ciferrii]
Length = 1254
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 75/232 (32%), Positives = 110/232 (47%), Gaps = 50/232 (21%)
Query: 41 VTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGE-----EE 95
V+K R++ +RV + D+GSEDE+VP + +SESE + E ++
Sbjct: 180 VSKTQRQRKKRRV-------------IADDGSEDEFVP---DAKSESEDDADEAFVVPDD 223
Query: 96 LEES--------------VEDPTPSSSEAEVTPMKNGN----KRGLSSK--SGQPTKKPK 135
E+ +E PS+ +P K LS+K S P K K
Sbjct: 224 FEDKKDQDVDDDLDDDDFIEITKPSTKPKSKSPAPIATSTKPKTNLSNKFTSASPYK-AK 282
Query: 136 LTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKT 195
++ P T S P+ P + T + + YQ+L I DADR S P Y+P+T
Sbjct: 283 VSQPVTKS-PTPPKAQTKSQKFTKENEE-----RYQWLI--DIRDADRNSITDPQYDPRT 334
Query: 196 LYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL 247
LY+P K T Q+W IKS+ +DC++FFK GKFYEL+ DA+I +E
Sbjct: 335 LYIPSSAWAKFTNFEKQYWEIKSKMWDCIVFFKKGKFYELYEKDAMIAHNEF 386
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 41/136 (30%), Positives = 63/136 (46%), Gaps = 5/136 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L I L FATHY S+ + + P + M+ I D +
Sbjct: 1087 RGGSSSDGFAIAEAVLHHVATHIQSLGFFATHYGSLGQSFQNHPQIKPFRMAIIVDNESK 1146
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
I FLYKL G SFG +VA + GI ++++ A E L++ +++
Sbjct: 1147 NI---TFLYKLEEGAAEGSFGMHVASMCGIEKEIIDNSEIAAETFEHTSKLKRTELNQL- 1202
Query: 509 SLVKSGEKVDVEELQK 524
S + G + D+ L K
Sbjct: 1203 SAIPLGLQSDIARLLK 1218
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/133 (26%), Positives = 67/133 (50%), Gaps = 11/133 (8%)
Query: 263 LLTQLCNYESQTPSGC----FPD-MSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEV 317
L +L N+E + G FP+ + + L +++AFD +A G +I G++++YD+
Sbjct: 762 LYKKLQNFEMKGSLGKIYSKFPNEIQDSLSKWDDAFDRVKAKDEGVLILSKGIEQDYDDS 821
Query: 318 MDEIKSIEKEIQTYLRTQCAHFGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVAT 376
+ IK +E E++ ++ F I Y ++ K+ Y +E+PS+ + +R+
Sbjct: 822 VSTIKDLEHELEATIKQYRRTFKTQEINYKDSGKEL--YTIEMPSRIT--VPKDWKRMGA 877
Query: 377 KKKNVENYVTPEC 389
KK Y +PE
Sbjct: 878 SKKTTR-YWSPEV 889
>gi|336110040|gb|AEI16788.1| mutS protein 6 [Crotaphytus collaris]
Length = 331
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 32/53 (60%), Positives = 44/53 (83%)
Query: 201 EFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
++L+ TP M +WW +KSQNFDCV+F+KVGKFYEL+HMDAV+G ++L +MK
Sbjct: 2 DYLRNCTPGMRKWWELKSQNFDCVIFYKVGKFYELYHMDAVVGVNQLGLVFMK 54
>gi|295657582|ref|XP_002789358.1| predicted protein [Paracoccidioides sp. 'lutzii' Pb01]
gi|226283878|gb|EEH39444.1| predicted protein [Paracoccidioides sp. 'lutzii' Pb01]
Length = 701
Score = 84.7 bits (208), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 72/234 (30%), Positives = 105/234 (44%), Gaps = 42/234 (17%)
Query: 37 DDSPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEEL 96
D S VT P R++ K VKS ++SD E D++ S A+ S+ E+E
Sbjct: 167 DRSSVT--PARRAKKSVKSYLESDDE--DVIP--ASRKFGAGGTAKRRKTVACSADEDEF 220
Query: 97 EES--------VEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFP 148
++ + P SE EV P K + +S P+K P +
Sbjct: 221 NDNDGFSDDDLDDFIVPDDSEDEVKPSKKRKRPSSASIKVSPSKSPPVQNEG-------- 272
Query: 149 VSDTSETTPSTSGAQDWSHN-------------------HYQFLHPDHILDADRRSPKHP 189
SD STS A W+++ +++ +I D DR P HP
Sbjct: 273 -SDLELPDASTSSALKWTYDPNDTEPPKQRPALTKPHEPEHRYPWLANITDIDRNPPGHP 331
Query: 190 DYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
DY+P+T+Y+PP K +P Q+W IK + +D V+FFK GKFYEL+ DA IG
Sbjct: 332 DYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIG 385
>gi|7012942|gb|AAF35250.1|AF227632_1 mismatch binding protein Mus3 [Zea mays]
Length = 629
Score = 84.3 bits (207), Expect = 1e-13, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 66/113 (58%), Gaps = 2/113 (1%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA LE + Q+ CL +F+THYH +A + V+ +M+ +
Sbjct: 467 RGTSTSDGQAIAASVLEYLVHQVQCLGLFSTHYHRLAME-HNDTKVSLCHMACEVVEGGG 525
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
G++ + FLY+L PG CPKS+G NVA LAGIP +++ + + EA + R
Sbjct: 526 GLEEVTFLYRLTPGACPKSYGVNVARLAGIPTKLLQRANEKSSEFEANYGKRH 578
Score = 56.2 bits (134), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 44/154 (28%), Positives = 70/154 (45%), Gaps = 12/154 (7%)
Query: 240 AVIGADEL--ACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKE 297
A+ G ++ ACS + C+ S L+ L +P ++S +L F +AFD +
Sbjct: 121 ALCGCQQMFHACSSISTLICSEGSQLIDLL------SPGKGLSNISSILDRFRDAFDWSD 174
Query: 298 ASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFG-CTVIYSEAQKKQKKYV 356
A G IP G D E+D + I+ I+ ++ YL+ Q +V Y K Y+
Sbjct: 175 ADRNGRFIPYEGCDPEFDATCNAIEEIKSSLKEYLKEQRKLLRPASVNYVNVGKDM--YL 232
Query: 357 LEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
+EVP N++ +T KK Y TPE +
Sbjct: 233 IEVPESLGGSVPRNYELQST-KKGFYRYWTPELK 265
>gi|70953875|ref|XP_746012.1| DNA repair protein [Plasmodium chabaudi chabaudi]
gi|56526506|emb|CAH77895.1| DNA repair protein, putative [Plasmodium chabaudi chabaudi]
Length = 1136
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 62/98 (63%), Gaps = 4/98 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG IA TLE+ I C +F+THYH + ++ N++ +MS D D
Sbjct: 994 RGTSSFDGTAIALSTLEQISDTIKCRCIFSTHYHLLVEEVKHNTNISNYHMSLSID---D 1050
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
+ I+FLYK + GICPKSFG ++A+LAG+P+++++
Sbjct: 1051 DQEKIIFLYKFIKGICPKSFGIHIAKLAGLPKEIIELA 1088
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/90 (37%), Positives = 57/90 (63%), Gaps = 8/90 (8%)
Query: 171 QFLHPDHILDADRRSPKHPDYNPKTLYVPPE-----FLKKQ---TPCMGQWWTIKSQNFD 222
+++ P +I D + +P +P+Y+ T++ PP+ KQ TP M Q+W IKS+NFD
Sbjct: 183 KWIQPQYIRDINLNTPDNPNYDSSTIWTPPQDHQWAIEYKQAHYTPGMQQFWKIKSKNFD 242
Query: 223 CVLFFKVGKFYELFHMDAVIGADELACSYM 252
++FFK+G+FYE+F++DA I ++M
Sbjct: 243 KIIFFKMGRFYEIFYIDACIMHTICGLNWM 272
>gi|347840481|emb|CCD55053.1| similar to DNA mismatch repair protein msh6 [Botryotinia
fuckeliana]
Length = 1213
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/160 (31%), Positives = 69/160 (43%), Gaps = 43/160 (26%)
Query: 125 SKSGQPTKKPKLTAPSTPSTPSFPV-----SDTSETTPSTSGAQDWSHN----------- 168
SKS + K+P TA S T + P D P S AQ W ++
Sbjct: 187 SKSSKKRKRPTSTASSRKRTNNLPAHSSIDDDEDMQIPEISTAQQWKYDPDNIQPRQAKS 246
Query: 169 -------------------------HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFL 203
Y++L + D DR P HPDY+P+TL++PP
Sbjct: 247 SSISRTPNSSGKKFKEKASKTDPNQRYEWLANER--DIDRNPPGHPDYDPRTLFIPPMAF 304
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
TP Q+W +K + +D +LFFK GKFYEL+ DA IG
Sbjct: 305 NNFTPFEAQYWKVKQKCWDTILFFKKGKFYELYERDATIG 344
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 55/111 (49%), Gaps = 4/111 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IGC+ FATHYHS+A P V + M+ D +
Sbjct: 1045 RGTSSYDGVSVAQAVLHHVASHIGCIGFFATHYHSLALEFDSHPEVINKRMAIEVDNESR 1104
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
+++FLYKL G+ SFG + A + GIP VV A + E L
Sbjct: 1105 ---SVLFLYKLENGVAEGSFGMHCASMCGIPRKVVDRAEVAAREWEFTSRL 1152
Score = 45.4 bits (106), Expect = 0.077, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 37/55 (67%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLR 333
PD++E L++++ AFD K+A ++P+ GV++++D D I+ I +E+ + L+
Sbjct: 744 IPDLAEPLQWWKTAFDRKKAKEHKILVPERGVEEDFDASQDRIEEINQELASLLK 798
>gi|453088772|gb|EMF16812.1| DNA mismatch repair protein msh6 [Mycosphaerella populorum SO2202]
Length = 1202
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 51/148 (34%), Positives = 68/148 (45%), Gaps = 38/148 (25%)
Query: 131 TKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHN---------------------- 168
T P +A S P PV + SE P+TS A W+H+
Sbjct: 199 THTPAGSASRNVSPPPLPVEE-SEEIPTTSTATQWTHDPDAPRPTEPRKLPPMKKSTAGA 257
Query: 169 -------------HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWT 215
Y +L H DADR P HPDY+P+T+Y+PP K + Q+W
Sbjct: 258 ARKQKAHVTEPSDRYPWLAEIH--DADRNPPDHPDYDPRTIYIPPMAWNKFSAFEKQYWE 315
Query: 216 IKSQNFDCVLFFKVGKFYELFHMDAVIG 243
IK + +D ++FFK GKFYEL+ DA IG
Sbjct: 316 IKQKFWDTIVFFKKGKFYELYENDATIG 343
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L +G L FATHYHS+A ++ P V + M+ D
Sbjct: 1044 RGTSSYDGVAVAQAVLHHVATHVGSLGYFATHYHSLAAEFQQHPEVVAKRMAVKVDDDVR 1103
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
+ FLY+L G+ S+G + A + GIP+ V+
Sbjct: 1104 ---DVTFLYELENGVAEGSYGMHCAAMCGIPKKVI 1135
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 38/144 (26%), Positives = 67/144 (46%), Gaps = 12/144 (8%)
Query: 246 ELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNII 305
E S +++ G GE LL QL + PD++ LK++ AFD K+A+ G I
Sbjct: 717 EYTMSLLRKFG-EGEG-LLGQLIS--------AMPDLAGALKHWAEAFDRKQATDDGLFI 766
Query: 306 PKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYAS 365
P+ GV++++DE I + + + L+ I K+ Y LE+P K
Sbjct: 767 PQPGVEEDFDESQQRIDDVIQRLNQLLKKARKDLDSQAIKFTDNGKE-IYQLEIPIKVKG 825
Query: 366 KAKSNHQRVATKKKNVENYVTPEC 389
N ++++ K+ + + +PE
Sbjct: 826 NIPKNWKQMSATKQ-CKRWYSPEL 848
>gi|327350733|gb|EGE79590.1| DNA mismatch repair protein msh6 [Ajellomyces dermatitidis ATCC
18188]
Length = 1244
Score = 84.3 bits (207), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 74/239 (30%), Positives = 106/239 (44%), Gaps = 39/239 (16%)
Query: 37 DDSPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDE---------YVPPKAEVESES 87
D S VT P R++ K V+S ++SD E D+LQ + + V E E +
Sbjct: 152 DRSSVT--PTRRAKKVVQSYLESDEE--DVLQIHRKSNRGRSLKRRKTAVSSSDEDEFKD 207
Query: 88 EHSSGEEELEESVEDPTPSSSEAEVTPMK------NGNKRGLSSKS-------------- 127
+H +++L++ V P SE EV P K N + SSKS
Sbjct: 208 DHEFSDDDLDDFV---VPDDSEDEVKPSKKRKRPSNVTAKVFSSKSTPAQDDDLDLDLQD 264
Query: 128 ---GQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRR 184
G K + P P V+ + S ++ +I D DR
Sbjct: 265 ACAGSALKWTYDPNDTEPPKPRAAVTRNAVPGEKKKVKAHMSEPEQRYPWLANITDIDRN 324
Query: 185 SPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
P HPDY+P+T+Y+PP K +P Q+W IK + +D V+FFK GKFYEL+ DA IG
Sbjct: 325 PPGHPDYDPRTIYIPPLAWSKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIG 383
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT + DG +A+ L IG L FATHYHS+ P +A M +++D+
Sbjct: 1082 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLTAEFEGHPEIAPRRMRIHVDDEEK 1141
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLYKL G+ SFG + A + GIP+ VV+ A Q E L++
Sbjct: 1142 ----RVTFLYKLEDGVAEGSFGMHCASMCGIPDKVVERAEVAAKQWEHTSRLKE 1191
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 11/133 (8%)
Query: 246 ELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNII 305
+ A +KE+G GE ++ QL PD+S L+Y++ AFD +A +G ++
Sbjct: 757 DYAMGLLKETG-PGEG-VIGQLV--------ASMPDLSGHLQYWKTAFDRTKAKDSGILV 806
Query: 306 PKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYAS 365
P+AGV++++D D I IE ++ L+ G I K+ Y LEVP K +
Sbjct: 807 PEAGVEEDFDASHDRISEIESDLDQLLKKVRKQLGSNAIVYRDNGKE-IYQLEVPIKIKN 865
Query: 366 KAKSNHQRVATKK 378
KS Q ATK+
Sbjct: 866 VPKSWDQMSATKQ 878
>gi|302916663|ref|XP_003052142.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256733081|gb|EEU46429.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1100
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 67/114 (58%), Gaps = 1/114 (0%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA+ L+ + + CLT+F THY ++AR V +M + +K D
Sbjct: 959 RGTSTHDGAAIAQAVLQHVVTETRCLTLFITHYQNLARVAEGLDGVKNVHMKFKAEKGAD 1018
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
G + + FLY++ G+ +S+G NVA LA IP+ V++ + + QME +R+L
Sbjct: 1019 GEEEVTFLYEVGEGVAHRSYGLNVARLARIPKKVIEVASLKSSQMEQEMRMRRL 1072
>gi|124506031|ref|XP_001351613.1| DNA repair protein, putative [Plasmodium falciparum 3D7]
gi|23504540|emb|CAD51420.1| DNA repair protein, putative [Plasmodium falciparum 3D7]
Length = 1350
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 39/99 (39%), Positives = 64/99 (64%), Gaps = 6/99 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSY-IEDKRN 447
RGT + DG IA TLE+ I C +F+THYH + ++ N++ +MS I+D++
Sbjct: 1208 RGTSSFDGTAIALSTLEQISDVIKCRCIFSTHYHLLVEEVKHNKNISNYHMSLSIDDEQ- 1266
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
+ I+FLYK + G+CPKSFG ++A+LAG+P++++
Sbjct: 1267 ---EKIIFLYKFIKGVCPKSFGIHIAKLAGLPKEIIDLA 1302
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 43/144 (29%), Positives = 76/144 (52%), Gaps = 11/144 (7%)
Query: 120 KRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQF---LHPD 176
K+ + + G +KK + + P+S T++ N ++F + P
Sbjct: 308 KKCIEKRKGDDSKKSQELDGLRNKYLNLPISITNDKFRLYIEHYFLYCNTFEFPKWIQPQ 367
Query: 177 HILDADRRSPKHPDYNPKTLYVPP-------EFLKKQ-TPCMGQWWTIKSQNFDCVLFFK 228
+I D + R+P H DY+ T++ PP E+ + TP M Q+W IKS+NFD ++FFK
Sbjct: 368 YIRDINLRTPDHADYDSSTIWTPPPDHKWAIEYKQAHYTPGMQQFWKIKSRNFDKIIFFK 427
Query: 229 VGKFYELFHMDAVIGADELACSYM 252
+G+FYE+F++DA + + ++M
Sbjct: 428 MGRFYEIFYIDACLMHTICSLNWM 451
>gi|392574726|gb|EIW67861.1| hypothetical protein TREMEDRAFT_40008 [Tremella mesenterica DSM
1558]
Length = 959
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 38/84 (45%), Positives = 54/84 (64%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
Y+FL P+++ DA+ R P PDY+ +TLY+P E + TP Q+W IK ++D VLFF+
Sbjct: 22 YKFLLPENLKDAEGRRPSDPDYDGRTLYIPKEDWRGFTPFERQFWEIKQNHYDTVLFFQK 81
Query: 230 GKFYELFHMDAVIGADELACSYMK 253
GKF+EL+ DA IG D+ K
Sbjct: 82 GKFFELYEGDAQIGHDQFDLKLTK 105
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGC-LTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA L L FATHY +A PN+ +M + ++
Sbjct: 798 RGTSTHDGMAIAMAVLHHLATHTLPLGFFATHYGLLADEFLYHPNIRNMHM---QTHVDE 854
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
+ +VFLYKL+PG+ S G +VA +AG+P VV
Sbjct: 855 DLLQVVFLYKLIPGVAESSHGTHVAHMAGVPTSVV 889
>gi|115397903|ref|XP_001214543.1| DNA mismatch repair protein msh6 [Aspergillus terreus NIH2624]
gi|114192734|gb|EAU34434.1| DNA mismatch repair protein msh6 [Aspergillus terreus NIH2624]
Length = 1206
Score = 84.0 bits (206), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 78/257 (30%), Positives = 123/257 (47%), Gaps = 31/257 (12%)
Query: 5 SKESPEKKGDSESSTPASSKGKKTS--KSPAKSEDDSPVTKRPRRKSA--KRVKSAIQSD 60
++ESP + + ++S+P+ K+ + +S ++ EDD RP RK+ KR K + +SD
Sbjct: 109 ARESPSESLEKKTSSPSRRAKKQVNYMESDSEGEDDDEQIFRPGRKNNRPKRRKVSPESD 168
Query: 61 SEPDDMLQDNG-SEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGN 119
E D D G S+DE +S+ E ++ S P SS +P ++ +
Sbjct: 169 EEFDQDGGDAGYSDDEMDDFIVADDSDEEVKQPKKRKRPSQPKPKSSSLPPAGSPDEDID 228
Query: 120 KRGLSSKSGQPTK--------KPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSH---- 167
+ SG K +P+ + PS+ PS+ + +H
Sbjct: 229 LDIPEATSGTALKWTYDPDNQEPRQERATVPSS-----------KPSSGTVKQKAHVTEP 277
Query: 168 -NHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLF 226
Y +L +I D D P HPDY+P+T+Y+PP K +P Q+W IK + +D V+F
Sbjct: 278 EQRYPWLA--NIRDIDGHPPGHPDYDPRTIYIPPLAWSKFSPFEKQYWEIKQKFWDTVVF 335
Query: 227 FKVGKFYELFHMDAVIG 243
FK GKFYEL+ DA IG
Sbjct: 336 FKKGKFYELYENDATIG 352
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/192 (29%), Positives = 84/192 (43%), Gaps = 27/192 (14%)
Query: 330 TYLRTQC-----AHFGCTVIYSEAQKKQKKYVLEVPSKYASK-----AKSNHQRVATKKK 379
T LR C A GC Y Q + V + S+ + A+S ++ K
Sbjct: 973 TVLRMTCVAVIMAQIGC---YLPCQSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETK 1029
Query: 380 NVENYVTPEC--------RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLRE 430
+ + TP RGT + DG +A+ L IG L FATHYHS+A
Sbjct: 1030 KILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLATEFEG 1089
Query: 431 EPNVAFEYMS-YIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTV 489
P +A + M +++D+ I FLYKL G+ SFG + A + GIP+ V++
Sbjct: 1090 HPEIAPKRMKIHVDDEER----RITFLYKLEDGVAEGSFGMHCAAMCGIPDKVIERAEVA 1145
Query: 490 AFQMEARHNLRQ 501
A Q E L++
Sbjct: 1146 AKQWEHTSRLKE 1157
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 45/141 (31%), Positives = 71/141 (50%), Gaps = 13/141 (9%)
Query: 250 SYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAG 309
S +KESG +GE ++ QL N P++ +LL+Y++ AFD +A G ++PK G
Sbjct: 727 SLLKESG-SGEG-VIGQLIN--------AMPNLDDLLEYWKTAFDRSKARDNGILVPKLG 776
Query: 310 VDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKS 369
V++++D I + ++ L+ G T I K+ Y +EVP K K+
Sbjct: 777 VEEDFDNSQANISQLHNDLDNLLKRVRKELGSTAICYRDNGKE-IYQMEVPIKVKGIPKN 835
Query: 370 NHQRVATKKKNVENYVTPECR 390
Q ATK+ V+ Y PE R
Sbjct: 836 WDQMSATKQ--VKRYYFPELR 854
>gi|392567582|gb|EIW60757.1| hypothetical protein TRAVEDRAFT_57899 [Trametes versicolor FP-101664
SS1]
Length = 1084
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/108 (43%), Positives = 63/108 (58%), Gaps = 3/108 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRL-REEP-NVAFEYMSYIEDKR 446
RGT T DG IA L+ +Q + C T+F THY VA L R P +V +M + E+ R
Sbjct: 966 RGTSTFDGMAIAGAVLQHLVQEVKCKTLFITHYPQVATDLERMFPSDVGNMHMGFTEETR 1025
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
DG + FLY+L PG+ +SFG A LAG+PE V++ TT A M+
Sbjct: 1026 VDGTREVTFLYRLEPGLVTESFGVECARLAGLPETVLQVATTKAANMK 1073
>gi|348688376|gb|EGZ28190.1| hypothetical protein PHYSODRAFT_353490 [Phytophthora sojae]
Length = 880
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 45/96 (46%), Positives = 57/96 (59%), Gaps = 3/96 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA +E L I C T+FATHYHS+ V+ +M I D ND
Sbjct: 722 RGTSTFDGTAIAYSVVEHLLSDIQCRTMFATHYHSLVEEYVGNDKVSLGHMGCIVDPEND 781
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
+ FLYKL G+CPKS+G NVA LA +P++VV+
Sbjct: 782 --RKVTFLYKLEDGMCPKSYGINVAMLAKLPDEVVE 815
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 42/115 (36%), Positives = 66/115 (57%), Gaps = 1/115 (0%)
Query: 277 GCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQC 336
G FPD++E L++F+ +FD A +G I+P+ GVD E+D +I IE E+ YL+ Q
Sbjct: 409 GHFPDLTEKLEFFKRSFDQAAAKKSGVIVPQDGVDPEFDAACADIAQIEAELAEYLKEQR 468
Query: 337 AHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRG 391
+ C I +KK+ +Y LEVP SK ++ + ++KK + + TP RG
Sbjct: 469 SALRCRDINYWGKKKEDRYQLEVPESALSKQPKEYE-LKSRKKGYKRFHTPTIRG 522
>gi|12846234|dbj|BAB27085.1| unnamed protein product [Mus musculus]
Length = 444
Score = 83.6 bits (205), Expect = 2e-13, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 69/117 (58%), Gaps = 3/117 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ + V +M+ +E++
Sbjct: 301 RGTATFDGTAIANAVVKELAETIKCRTLFSTHYHSLVEDYSKSVCVRLGHMACMVENECE 360
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E + QLF
Sbjct: 361 DPSQETITFLYKFIKGACPKSYGFNAARLANLPEEVIQKGHRKAREFERMNQSLQLF 417
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/93 (30%), Positives = 50/93 (53%), Gaps = 3/93 (3%)
Query: 295 HKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQK 353
H++A G I PKAG D +YD+ + +I+ E+ + YL Q + GC +++Y +
Sbjct: 1 HEKARKTGLITPKAGFDSDYDQALADIRENEQSLLEYLDKQRSRLGCKSIVYWGIGR--N 58
Query: 354 KYVLEVPSKYASKAKSNHQRVATKKKNVENYVT 386
+Y LE+P +A++ + + KK + Y T
Sbjct: 59 RYQLEIPENFATRNLPEEYELKSTKKGCKRYWT 91
>gi|164423588|ref|XP_959678.2| DNA mismatch repair protein msh6 [Neurospora crassa OR74A]
gi|157070157|gb|EAA30442.2| DNA mismatch repair protein msh6 [Neurospora crassa OR74A]
Length = 1237
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 63/115 (54%), Gaps = 10/115 (8%)
Query: 129 QPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKH 188
+PT+ P+ AP + TPS T P T Y +L I DA+R P H
Sbjct: 283 EPTE-PRSAAPRSAQTPS-------ATKPKTKAHTREPEERYPWLA--DIQDANRNRPGH 332
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
PDY+P ++YVPP ++ +P Q+W IK +D V+FFK GKFYEL+ DA IG
Sbjct: 333 PDYDPGSVYVPPSAWRQFSPFETQYWEIKKNLWDTVVFFKKGKFYELYENDATIG 387
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IGC+ FATHYHS+A P + M D+ N
Sbjct: 1080 RGTSSYDGVAVAQAVLHHVASHIGCVGFFATHYHSLATEFENHPEIRARRMQIAVDEENK 1139
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
I FLYKL G+ SFG + A + GIP+ V++ A + E L++
Sbjct: 1140 ---RITFLYKLEDGVAEGSFGMHCAAMCGIPDKVIRRSEVAAKEWEHTSRLKE 1189
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD+ E L Y++ AFD K A +IP+ G+++++D E+ I+ E+Q L Q
Sbjct: 779 MPDLKEPLGYWKTAFDRKRARDDKLLIPEPGIEEDFDRSQAELDRIKGELQELLERQKTA 838
Query: 339 FGC-TVIYSEAQKKQKKYVLEVP 360
C T +++ K+ Y +EVP
Sbjct: 839 LRCKTAKFTDVGKEV--YQIEVP 859
>gi|403332270|gb|EJY65139.1| MutS domain III family protein [Oxytricha trifallax]
Length = 1425
Score = 83.6 bits (205), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 34/72 (47%), Positives = 52/72 (72%)
Query: 172 FLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGK 231
FL P+ ILD ++R P P Y+P T+++P ++K +P + Q+W IK +FD VL F+ GK
Sbjct: 389 FLLPEKILDGNKRRPDDPKYDPSTIFIPQHEMQKFSPFLQQYWEIKRTHFDKVLCFQKGK 448
Query: 232 FYELFHMDAVIG 243
FYEL+++DA+IG
Sbjct: 449 FYELYYIDALIG 460
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 62/106 (58%), Gaps = 4/106 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L+ +IGC ++FATHYH + + + P + M+Y D +N
Sbjct: 1281 RGTSTYDGLSIADAVLQYLADKIGCRSLFATHYHQLCSKYEDHPLIQNASMTYNLDIKNQ 1340
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
I +L++L C KSFG NVA++AG+P+ ++K T + ++E
Sbjct: 1341 ---KITYLFQLKKEKCGKSFGINVAQIAGLPQKIIKTAMTKSIELE 1383
>gi|452989141|gb|EME88896.1| hypothetical protein MYCFIDRAFT_25225 [Pseudocercospora fijiensis
CIRAD86]
Length = 1117
Score = 83.2 bits (204), Expect = 3e-13, Method: Compositional matrix adjust.
Identities = 36/66 (54%), Positives = 46/66 (69%)
Query: 178 ILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFH 237
I DADR +P HPDY+P+TLYVPP +P Q+W IK + +D ++FFK GKFYEL+
Sbjct: 194 IQDADRHTPDHPDYDPRTLYVPPGAWNNFSPFEKQYWEIKCKFWDTIVFFKKGKFYELYE 253
Query: 238 MDAVIG 243
DA IG
Sbjct: 254 NDATIG 259
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/95 (36%), Positives = 52/95 (54%), Gaps = 4/95 (4%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L +G L FATHYHS+A ++ P V + M+ K +D
Sbjct: 960 RGTSSYDGVAVAQAVLHHIATHVGSLGYFATHYHSLAAEFQKHPEVIAKRMAV---KVDD 1016
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
I + FLY L G+ S+G + A + GIP+ V+
Sbjct: 1017 DIRDVTFLYHLEDGVAEGSYGMHCAAMCGIPDKVI 1051
Score = 55.5 bits (132), Expect = 8e-05, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 2/114 (1%)
Query: 278 CFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCA 337
P++ L +++ AFD K+A G +IP+ GV+ ++DE + + +EKE+ L+
Sbjct: 655 AMPNLQTPLNHWKEAFDRKQAKEQGLLIPQPGVEDDFDESQERVDGVEKELNKLLQRARK 714
Query: 338 HFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRG 391
G + I K+ Y LEVP K N ++++ K+ + + +PE G
Sbjct: 715 DLGSSAIKFTDNGKE-IYQLEVPIKVKGNIPKNWKQMSATKQ-CKRWYSPELEG 766
>gi|344230439|gb|EGV62324.1| hypothetical protein CANTEDRAFT_126075 [Candida tenuis ATCC 10573]
Length = 923
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 53/146 (36%), Positives = 77/146 (52%), Gaps = 21/146 (14%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGC------LTVFATHYHSVARRLREEPNVAFEYMSYIE 443
RGTGT DG VIA ++ F C + +F TH+H + E V YM +I+
Sbjct: 792 RGTGTFDGYVIAYSIIQHF----CGHAESPVVLFITHFHKLTELANEHKVVGNFYMDFIK 847
Query: 444 DKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
+D I FLYKLVPGI SFG NVA+LAGIPE+V++ + +M+ ++R
Sbjct: 848 KPESDEIQ---FLYKLVPGILDNSFGLNVAKLAGIPEEVIERAKVKSIEMKNDMDIRA-- 902
Query: 504 IHKFASLVKSGEKVDVEELQKALESV 529
I ++K + L+KA E++
Sbjct: 903 ITDVLRMIKE------KNLEKAFETI 922
>gi|221057249|ref|XP_002259762.1| DNA repair protein [Plasmodium knowlesi strain H]
gi|193809834|emb|CAQ40538.1| DNA repair protein, putative [Plasmodium knowlesi strain H]
Length = 1303
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 64/99 (64%), Gaps = 6/99 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI-GCLTVFATHYHSVARRLREEPNVAFEYMSY-IEDKRN 447
RGT + DG IA TLE+ + C +F+THYH + ++ N++ +MS I+D++
Sbjct: 1160 RGTSSFDGTAIALSTLEQISDVVKCRCIFSTHYHLLVEEVKHNNNISNYHMSLSIDDQQ- 1218
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
+ I+FLYK + G+CPKSFG ++A+LAG+P++++
Sbjct: 1219 ---EKIIFLYKFIKGVCPKSFGIHIAKLAGLPKEIIDLA 1254
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 35/86 (40%), Positives = 56/86 (65%), Gaps = 11/86 (12%)
Query: 168 NHYQF---LHPDHILDADRRSPKHPDYNPKTLYVPPE-----FLKKQ---TPCMGQWWTI 216
N ++F + P +I D + R+P + DY+ T++ PP+ KQ TP M Q+W I
Sbjct: 281 NTFEFPKWVQPQYIRDLNLRTPDNADYDSSTIWTPPQDHPWAVEYKQAHYTPGMQQFWKI 340
Query: 217 KSQNFDCVLFFKVGKFYELFHMDAVI 242
KS+NFD ++FFK+G+FYE+F++DA +
Sbjct: 341 KSKNFDKIIFFKMGRFYEIFYIDACL 366
>gi|330923791|ref|XP_003300375.1| hypothetical protein PTT_11611 [Pyrenophora teres f. teres 0-1]
gi|311325500|gb|EFQ91520.1| hypothetical protein PTT_11611 [Pyrenophora teres f. teres 0-1]
Length = 1214
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 68/218 (31%), Positives = 104/218 (47%), Gaps = 16/218 (7%)
Query: 40 PVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESE--SEHSSGEEELE 97
P+ R ++ KR + I+ DS+ D+ D ++ + + E E + S EE
Sbjct: 141 PIANNARGRATKRQRVTIEEDSD-DEFGLDAATQKAMLEEEDEEEDDFIVPDDSEEEVAS 199
Query: 98 ESVEDPTPSSSEAEVTPM--------KNGNKRGLSSKSGQPTKKPKLTAPSTPST--PSF 147
+ + P+ S + A+ +P K ++ G + + T + + P P P
Sbjct: 200 KKRKRPSASKARAKTSPASSPPIIEEKYDDEDGDVAMTSTSTAQQWIYDPENPMVFKPRA 259
Query: 148 PVSDTSETTPSTSGAQDWSHNHYQFLHP--DHILDADRRSPKHPDYNPKTLYVPPEFLKK 205
PV T P+ + S + + HP H DADR HPDY+P+TLYVPP K
Sbjct: 260 PVQATKRD-PNKKIKERPSASEPETRHPWLAHQQDADRHPIDHPDYDPRTLYVPPHAFDK 318
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
+ Q+W IKS+ +D V+FFK GKFYEL+ DA IG
Sbjct: 319 LSAFEKQYWEIKSKWWDTVVFFKKGKFYELYEKDATIG 356
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/111 (35%), Positives = 59/111 (53%), Gaps = 14/111 (12%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR-- 446
RGT + DG +A+ L ++GC+ FATHY S+A+ FE+ +E+KR
Sbjct: 1058 RGTSSYDGVAVAQAVLHDISTRVGCVGFFATHYRSLAKE--------FEFHPEVENKRMR 1109
Query: 447 ---NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+D +I FLYKL G+ SFG + A + GIP+ V++ A + E
Sbjct: 1110 IHVDDDSKSITFLYKLEEGVAEGSFGMHCAAMCGIPKKVIENAEKAAREWE 1160
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 38/132 (28%), Positives = 63/132 (47%), Gaps = 8/132 (6%)
Query: 262 TLLTQLCNYESQTPS--GCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMD 319
+LL Q N E PD++ L + +AFD A G +IP+ G+++++D +
Sbjct: 738 SLLKQFGNGEGVIGQLISSMPDLATALAKWTSAFDRNIARKEGLLIPEPGIEEDFDNSQE 797
Query: 320 EIKSIEKEIQTYLRTQCAHFGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+++ + ++ L+ G + Y++ K + Y LEVP K KS Q AT K
Sbjct: 798 RVEACKADLDVLLKKARKELGSNAVQYNDIGK--EIYQLEVPKK-VKVPKSWDQMSATAK 854
Query: 379 KNVENYVTPECR 390
V Y +PE R
Sbjct: 855 --VTRYYSPELR 864
>gi|428186444|gb|EKX55294.1| hypothetical protein GUITHDRAFT_99074 [Guillardia theta CCMP2712]
Length = 1131
Score = 83.2 bits (204), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 48/150 (32%), Positives = 75/150 (50%), Gaps = 25/150 (16%)
Query: 105 PSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKL---TAPSTPSTPSFPVSDTSETTPSTSG 161
P+ + + T K G+ R +S S K+ L TAP+ S SF
Sbjct: 150 PTIRKGKETEGKGGSSRQQASPSSNQGKQQALKGATAPAEASKKSF-------------- 195
Query: 162 AQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNF 221
+ +L HI DA++R P PDY+ +++VPP+ ++ T Q+W IK NF
Sbjct: 196 --------WWWLEDQHIKDANQRRPTDPDYDASSVFVPPDSFREMTNFQQQYWNIKKCNF 247
Query: 222 DCVLFFKVGKFYELFHMDAVIGADELACSY 251
D ++ K+GKFYEL+ DA++G EL ++
Sbjct: 248 DTLILCKLGKFYELYERDALVGHKELNLNF 277
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 55/95 (57%), Gaps = 4/95 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L+ + ++GC T+ +THYH + RE+ VA +M+ + +
Sbjct: 959 RGTSTFDGLAIAYAVLKDLVDRVGCRTLLSTHYHLLVDEFREDSRVAPMHMAC---RVEE 1015
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
D ++ LYKL P C +SFG A AGIP++++
Sbjct: 1016 ETDRLIMLYKLTPSACSRSFGLECARAAGIPQELL 1050
Score = 44.3 bits (103), Expect = 0.16, Method: Compositional matrix adjust.
Identities = 26/113 (23%), Positives = 53/113 (46%), Gaps = 1/113 (0%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD S +++ + FD A G++ G D+ D+ + + ++K++ YL +
Sbjct: 649 LPDTSSVIESVSSKFDMPLAREKGSLSLLPGFDRSLDDSLRRKEDVDKQLNEYLLEEKKR 708
Query: 339 FGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRG 391
C + + K ++LEVP+ + S + +H + + K+ Y+T RG
Sbjct: 709 TSCYKMRFASSSKD-PFLLEVPADFPSSSVPDHFELHSANKSCRRYMTERLRG 760
>gi|440795533|gb|ELR16653.1| MutS domain containing protein [Acanthamoeba castellanii str. Neff]
Length = 1266
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/144 (32%), Positives = 71/144 (49%), Gaps = 22/144 (15%)
Query: 104 TPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSG-- 161
TP+ + NG K+G + Q +PK P D + +T+G
Sbjct: 262 TPTMASPRAAAADNGLKKGTLGRGVQLGARPK---------PKQLDDDEASGEEATTGEF 312
Query: 162 --AQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQ 219
W N LDA+RR HP+Y+P TL++P + TP Q+W IKS+
Sbjct: 313 GDTWSWLRNE---------LDAERRPRTHPNYDPSTLFIPKSEFARLTPAQQQYWLIKSK 363
Query: 220 NFDCVLFFKVGKFYELFHMDAVIG 243
N+D ++FF+VGKF+EL++ DA +G
Sbjct: 364 NWDSLVFFRVGKFFELYNKDADLG 387
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 50/82 (60%), Gaps = 2/82 (2%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD SE+L YF +AFD + A I P GVD YDEV D I +E++++ YL Q
Sbjct: 804 IPDYSEVLGYFCDAFDWQVAKERKQITPNPGVDLGYDEVRDNIADLEQQLEEYLDQQRKR 863
Query: 339 FGCTVIYSEAQKKQKKYVLEVP 360
FG ++ Y+ ++KK Y++EVP
Sbjct: 864 FGVSMHYTTSEKKD--YLIEVP 883
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 28/106 (26%), Positives = 44/106 (41%), Gaps = 24/106 (22%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L+ ++ C ++F+THYH + + +A +M + +K
Sbjct: 1114 RGTSTFDGYGIAYGVLDDLSRRLKCRSLFSTHYHLLTKEFEGNREIALFHMGCLANKET- 1172
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
NVA AG+ E VV+ +A + E
Sbjct: 1173 ----------------------NVARAAGVMESVVRRAEAIATRFE 1196
>gi|337743319|gb|AEI73156.1| MSH6 [Kryptolebias marmoratus]
Length = 222
Score = 82.8 bits (203), Expect = 4e-13, Method: Compositional matrix adjust.
Identities = 47/117 (40%), Positives = 68/117 (58%), Gaps = 3/117 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA +++ + I C T+F+THYHS+ P V +M+ +E++
Sbjct: 102 RGTATYDGTAIASAVVKELAEEICCRTLFSTHYHSLVEDYANNPAVRLGHMACMVENECE 161
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
D +TI FLYK + G CPKS+GFN A LA +PE+V++ G A + E +LF
Sbjct: 162 DPSQETITFLYKFITGACPKSYGFNAARLANLPEEVIQSGHRKAGEFEKSTVSLRLF 218
>gi|349577164|dbj|GAA22333.1| K7_Msh6p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 1242
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/209 (34%), Positives = 103/209 (49%), Gaps = 29/209 (13%)
Query: 49 SAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEE----ELEESVEDPT 104
+AKR K + DSE D EDEY+P K + + + + + +E EL E D
Sbjct: 155 TAKRKKGKV-VDSESD--------EDEYLPDKNDGDEDDDIADDKEDIKGELAEDSGDDD 205
Query: 105 PSSSEAEVTPMKNGNK----------RGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSE 154
S AE T K + R +S + + +P APS TPS S S
Sbjct: 206 DLISLAETTSKKKFSNNTSHSSSPFTRNISRNNSKKKSRPN-QAPSRSYTPSH--SQPSA 262
Query: 155 TTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWW 214
T+ S S + YQ+L + DA RR P+Y+P+TLY+P K TP Q+W
Sbjct: 263 TSKS-SKFNKQNEERYQWLVDER--DAQRRPKSDPEYDPRTLYIPSSAWNKFTPFEKQYW 319
Query: 215 TIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
IKS+ +DC++FFK GKF+EL+ DA++
Sbjct: 320 EIKSKMWDCIVFFKKGKFFELYEKDALLA 348
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L I L FATHY ++A + P V MS + D +
Sbjct: 1065 RGGSSSDGFAIAESVLHHVATHIQSLGFFATHYGTLASSFKHHPQVRPLKMSILVD---E 1121
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
+ FLYK++ G SFG +VA + GI ++++ A +E H R + A
Sbjct: 1122 ATRNVTFLYKMLEGQSEGSFGMHVASMCGISKEIIDNAQIAADNLE--HTSRLVKERDLA 1179
Query: 509 SLVKSGEKVDV 519
+ +GE V V
Sbjct: 1180 ANNLNGEVVSV 1190
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 270 YESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQ 329
Y S P G + E +K + NAF+ ++A + I+P+ G D E+D+ MD I+ +E E+
Sbjct: 745 YISSFPEG----LVEAVKSWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDELM 800
Query: 330 TYLRTQCAHFGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPE 388
L T F C+ I Y ++ K+ Y +E+P SN ++A K + Y + E
Sbjct: 801 EILMTYRKQFKCSNIQYKDSGKEI--YTIEIPISATKNVPSNWVQMAA-NKTYKRYYSDE 857
Query: 389 CRGTGTN--DGCVIARVTLEKFLQIGCLTVFATHYHSV 424
R + + I + TLE+ L+ F HY+++
Sbjct: 858 VRALARSMAEAKEIHK-TLEEDLKNRLCQKFDAHYNTI 894
>gi|225679781|gb|EEH18065.1| DNA mismatch repair protein mutS [Paracoccidioides brasiliensis
Pb03]
Length = 1256
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 72/246 (29%), Positives = 110/246 (44%), Gaps = 32/246 (13%)
Query: 14 DSESSTPASSKGKKTSKSPAKSEDDSPVTKRPR---RKSAKRVKSAIQSDSEPDDMLQDN 70
D S TPA + KK KS +S+D+ + R + +AKR K+ + +
Sbjct: 167 DRSSVTPAR-RAKKAVKSYLESDDEDVIPARRKFGAGGTAKRRKT-----------IASS 214
Query: 71 GSEDEYVPPKAEVESESEHSS--GEEELEESVEDPTPSSSEAEVTPMKN----GNKRGLS 124
EDE+ + + E+E++ S + PS + +V+P ++ R L
Sbjct: 215 ADEDEFNDNDGFSDDDDFIVPDDSEDEVKPSKKRKRPSRASIKVSPSRSPPVQNEGRDLE 274
Query: 125 SKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDH------- 177
+ K T + P P + T + G + H P+H
Sbjct: 275 LPDASTSSALKWTYDPNDTEP--PKQRPALTKTTVLGENKKAKAHMS--EPEHRYPWLAN 330
Query: 178 ILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFH 237
I D DR P HPDY+P+T+Y+PP K +P Q+W IK + +D V+FFK GKFYEL+
Sbjct: 331 ITDIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYE 390
Query: 238 MDAVIG 243
DA IG
Sbjct: 391 NDATIG 396
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IG L FATHYHS+A P +A M D+
Sbjct: 1095 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLAAEFEGHPEIAPRRMRIHVDEEER 1154
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLYKL G+ SFG + A + GIP VV+ A Q E L++
Sbjct: 1155 ---RVTFLYKLEEGVAEGSFGMHCASMCGIPNKVVERAEIAAKQWEHTSRLKE 1204
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/165 (32%), Positives = 84/165 (50%), Gaps = 22/165 (13%)
Query: 226 FFKVGKFYELFHMDAVIGADELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSEL 285
F +V + +E +D +G +KE+G +GE ++ QL + PD+S
Sbjct: 759 FLRVLEGFE--QIDYTMG-------LLKETG-SGEG-VIGQLVS--------SMPDLSGH 799
Query: 286 LKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIY 345
LKY++ AFD +A +G ++P+AGV++++D D+I IE E+ L+ G T I
Sbjct: 800 LKYWKTAFDRSKAKDSGILVPEAGVEEDFDVSHDKITEIEYELDQLLKRVRKQLGSTAIV 859
Query: 346 SEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
K+ Y LEVP K + KS Q ATK+ + + PE R
Sbjct: 860 YRDNGKE-IYQLEVPIKIKTVPKSWDQMSATKQ--AKRFYFPELR 901
>gi|451852581|gb|EMD65876.1| hypothetical protein COCSADRAFT_198733 [Cochliobolus sativus
ND90Pr]
Length = 1213
Score = 82.8 bits (203), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 49/67 (73%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
++ DADR P HPDY+P+TL++PP ++ +P Q+W IKS+ +D ++FFK GKFYEL+
Sbjct: 290 NMQDADRHPPDHPDYDPRTLFIPPAAWREFSPFEKQYWEIKSKWWDTIVFFKKGKFYELY 349
Query: 237 HMDAVIG 243
DA IG
Sbjct: 350 EKDASIG 356
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L ++GC+ FATHY S+A+ P V + M D D
Sbjct: 1057 RGTSSYDGVAVAQAVLHDVATRVGCVGFFATHYRSLAKEFEFHPEVQNKRMRIHVD---D 1113
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
+I FLYKL G+ SFG + A + GIP V++
Sbjct: 1114 ESKSITFLYKLEEGVAEGSFGMHCAAMCGIPSKVIE 1149
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD++ L+ +++AFD + A G +IP+AGV+++YD EI S E ++T L+
Sbjct: 756 MPDLAACLEKWKSAFDREAARKDGILIPEAGVEEDYDNSQAEIDSCEANLETLLKKVRKE 815
Query: 339 FGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
G +IY+ K + Y LEVP K S Q AT K V Y TPE R
Sbjct: 816 QGSNAIIYNHLGK--EIYQLEVPKK-VKVPNSWDQMSATAK--VTRYYTPELR 863
>gi|84999622|ref|XP_954532.1| DNA mismatch repair protein, MutS family [Theileria annulata]
gi|65305530|emb|CAI73855.1| DNA mismatch repair protein, MutS family, putative [Theileria
annulata]
Length = 1279
Score = 82.4 bits (202), Expect = 5e-13, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 57/95 (60%), Gaps = 3/95 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG IA TLEK +IGC VF TH+ V NV+ +M+ D+
Sbjct: 1082 RGTSTFDGTAIAVATLEKISKIGCRCVFTTHFQDVCVFAETLSNVSMFHMAAKVDEETRS 1141
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
++ FLYKLVPG+CP S G +VA+LA IP+ +++
Sbjct: 1142 VE---FLYKLVPGVCPDSHGMHVAKLARIPDHIIQ 1173
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 55/99 (55%), Gaps = 17/99 (17%)
Query: 161 GAQDWSHNHYQF---------LHPDHILDADRRSPKHPDYNPKTLYVPP-------EFLK 204
G + + N+Y++ L P ++ DA+ R P Y+ TL++PP EF
Sbjct: 243 GFRSYVENYYRYKGTFSFPPWLEPRNLKDAEGRRPLAEGYDTTTLWIPPRGHRWAYEFRS 302
Query: 205 KQ-TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVI 242
T CM QWW +K +FD ++FFK+GKFYELF+ DA +
Sbjct: 303 GHYTECMQQWWEVKKTHFDSLVFFKMGKFYELFYQDACV 341
>gi|384252001|gb|EIE25478.1| hypothetical protein COCSUDRAFT_40713 [Coccomyxa subellipsoidea
C-169]
Length = 874
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 53/160 (33%), Positives = 77/160 (48%), Gaps = 16/160 (10%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYI---EDK 445
RGT T DG IA L+ I C +FATHYH + P V +M + D
Sbjct: 716 RGTSTFDGYAIAHAVLKHLSSSIDCRLLFATHYHPLTMEFLASPRVKLGHMEALVTGGDS 775
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR------HNL 499
++G I FLYKL+ G CPKS+G VA LAGIP +VV Q+E + L
Sbjct: 776 SSEG--HITFLYKLLSGACPKSYGLQVARLAGIPFNVVTVAQQAGTQLEEKLQGAFGKKL 833
Query: 500 RQLFIHK----FASLVKSGEKVDVEELQKALESVKSFESQ 535
++L + + ++ K+G E+L +A + + S+
Sbjct: 834 KELLVEQESYCLRNIAKAGSNFSYEQLLEAWTAAQGNSSR 873
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 28/68 (41%), Positives = 37/68 (54%), Gaps = 14/68 (20%)
Query: 197 YVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL-------AC 249
+ PPE K Q+WT+KS D ++FFKVGKFYEL+ DA IGA L
Sbjct: 16 WCPPESQK-------QYWTVKSSYRDTIIFFKVGKFYELYEDDAEIGAQVLGWRMTVTGV 68
Query: 250 SYMKESGC 257
+ ++ GC
Sbjct: 69 GHCRQVGC 76
>gi|326437890|gb|EGD83460.1| hypothetical protein PTSG_04067 [Salpingoeca sp. ATCC 50818]
Length = 1327
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 60/114 (52%), Gaps = 4/114 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L I C +FATHYH + L+ PNV M+ + D D
Sbjct: 1147 RGTSTFDGYAIAFAVLSHITDAIRCRCMFATHYHLLTDELKTNPNVTNYNMACVVD---D 1203
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
+ FLYKL PG+C KS+G NVA +AG+ + +V+ A Q EA +L
Sbjct: 1204 HQKDVTFLYKLQPGVCSKSYGMNVAHMAGVMDSIVETAKEKAVQYEATSRFGKL 1257
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 35/87 (40%), Positives = 52/87 (59%), Gaps = 2/87 (2%)
Query: 161 GAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQN 220
G+ + S Y +L D ++R+ HP+++P +LY+PP K TP Q+W IK +
Sbjct: 378 GSSNGSPERYAWLARPR--DKNKRTEGHPEFDPTSLYIPPSGWAKMTPFEKQYWDIKQHH 435
Query: 221 FDCVLFFKVGKFYELFHMDAVIGADEL 247
++ +LFFK GKFYEL+ DA IG E
Sbjct: 436 WNTILFFKKGKFYELYERDAEIGNREF 462
Score = 52.8 bits (125), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 40/152 (26%), Positives = 61/152 (40%), Gaps = 26/152 (17%)
Query: 238 MDAVIGADELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKE 297
DAV G DE GC G FP++ LK N FD +E
Sbjct: 820 FDAVSGQDE---------GCVG-----------------SLFPNLKAELKAIANIFDRQE 853
Query: 298 ASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVL 357
A + + PK G EYD +D+++SIEK + +L FG S Q +
Sbjct: 854 AKATDKLTPKPGALPEYDVAVDQMQSIEKRLNEHLANVRREFGAGKAISFWQPSAGRERY 913
Query: 358 EVPSKYASKAKSNHQRVATKKKNVENYVTPEC 389
++ + A K + ++ + K + Y +PE
Sbjct: 914 QIQVRVAMKKVPSSWKLMSSTKANKRYHSPEA 945
>gi|396468500|ref|XP_003838188.1| hypothetical protein LEMA_P117120.1 [Leptosphaeria maculans JN3]
gi|312214755|emb|CBX94709.1| hypothetical protein LEMA_P117120.1 [Leptosphaeria maculans JN3]
Length = 1288
Score = 82.4 bits (202), Expect = 6e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
H+ DADR HPDY+P+TLY+PP + +P Q+W IKS+ +D ++FFK GKFYEL+
Sbjct: 366 HMQDADRHPDDHPDYDPRTLYIPPGAWDQFSPFERQYWEIKSKFWDTIVFFKKGKFYELY 425
Query: 237 HMDAVIG 243
DA IG
Sbjct: 426 EKDATIG 432
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L ++GC+ FATHY S+A+ P V + M D D
Sbjct: 1132 RGTSSYDGVAVAQAVLHDISTRVGCVGFFATHYRSLAKEFEFHPEVQNKRMRIHVD---D 1188
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+I FLYKL G+ SFG + A + GIP V++ A + E
Sbjct: 1189 DSKSITFLYKLEEGVAEGSFGMHCAAMCGIPSKVIQTAEKAARKWE 1234
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 34/112 (30%), Positives = 55/112 (49%), Gaps = 4/112 (3%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD++ L +++AFD A G ++P+ G+++++D + EI+S ++ L+
Sbjct: 831 MPDLNTALSKWKSAFDRNVAKKEGILVPELGIEEDFDNSLAEIESCRADMDVLLKKARKD 890
Query: 339 FGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
GC I K+ LEVP K + S Q AT K V Y +PE R
Sbjct: 891 LGCNTICFRDNGKEICQ-LEVPKKVKVPS-SWDQMSATAK--VTRYYSPELR 938
>gi|163848498|ref|YP_001636542.1| DNA mismatch repair protein MutS [Chloroflexus aurantiacus J-10-fl]
gi|222526432|ref|YP_002570903.1| DNA mismatch repair protein MutS [Chloroflexus sp. Y-400-fl]
gi|189030708|sp|A9WFZ9.1|MUTS_CHLAA RecName: Full=DNA mismatch repair protein MutS
gi|254766621|sp|B9LB04.1|MUTS_CHLSY RecName: Full=DNA mismatch repair protein MutS
gi|163669787|gb|ABY36153.1| DNA mismatch repair protein MutS [Chloroflexus aurantiacus J-10-fl]
gi|222450311|gb|ACM54577.1| DNA mismatch repair protein MutS [Chloroflexus sp. Y-400-fl]
Length = 966
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 65/108 (60%), Gaps = 8/108 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL---QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG IAR +E ++GC T+FATHYH + RE P V +M+ +E
Sbjct: 792 RGTSTYDGMAIARAVVEYIHDHPRLGCRTLFATHYHELIALERELPRVRNYHMAAVE--- 848
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
DG +VFL++L PG +S+G +VAELAGIP +V++ + + +E
Sbjct: 849 RDG--RVVFLHELRPGGADRSYGIHVAELAGIPPEVIRRASALLADLE 894
>gi|451997168|gb|EMD89633.1| hypothetical protein COCHEDRAFT_1194981 [Cochliobolus
heterostrophus C5]
Length = 1213
Score = 82.4 bits (202), Expect = 7e-13, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 48/67 (71%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
++ DADR P HPDY+P+TL++PP + +P Q+W IKS+ +D ++FFK GKFYEL+
Sbjct: 290 NMQDADRHPPDHPDYDPRTLFIPPAAWRDFSPFEKQYWEIKSKWWDTIVFFKKGKFYELY 349
Query: 237 HMDAVIG 243
DA IG
Sbjct: 350 EKDASIG 356
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 51/96 (53%), Gaps = 4/96 (4%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L ++GC+ FATHY S+A+ P V + M D D
Sbjct: 1057 RGTSSYDGVAVAQAVLHDVATRVGCVGFFATHYRSLAKEFEFHPEVQNKRMRIHVD---D 1113
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
+I FLYKL G+ SFG + A + GIP V++
Sbjct: 1114 ESKSITFLYKLEEGVAEGSFGMHCAAMCGIPSKVIE 1149
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 6/113 (5%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD++ L+ +++AFD + A G +IP+AGV+++YD EI S E ++T L+
Sbjct: 756 MPDLAACLEKWKSAFDREAARKDGILIPEAGVEEDYDNSQAEIDSCEANLETLLKKVRKE 815
Query: 339 FGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
G +IY+ K + Y LEVP K S Q AT K V Y TPE R
Sbjct: 816 QGSNAIIYNHLGK--EIYQLEVPKK-VKVPNSWDQMSATAK--VTRYYTPELR 863
>gi|392573415|gb|EIW66555.1| hypothetical protein TREMEDRAFT_74736 [Tremella mesenterica DSM 1558]
Length = 1875
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 57/158 (36%), Positives = 78/158 (49%), Gaps = 15/158 (9%)
Query: 365 SKAKSNHQRVATKKKNVENYVTPEC--------RGTGTNDGCVIARVTLEKFLQIGCLTV 416
S+ KS ++ ++ VTP RGT T DG IA TL IGC T+
Sbjct: 1687 SRGKSTFMVELSETSDILRTVTPRTLVILDELGRGTSTYDGVAIAHATLSHLAGIGCDTL 1746
Query: 417 FATHYHSVARRL-REEP-NVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAE 474
F THY +VA L RE P ++ +M++ + K DG I FLYKL G+ SFG A
Sbjct: 1747 FVTHYPTVAEELAREFPAKISNWHMAFDQVKSPDGSAEITFLYKLSRGLAEASFGVWCAR 1806
Query: 475 LAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFASLVK 512
LAG+P V+ A Q++ + R +F SLV+
Sbjct: 1807 LAGLPRSVLDNAQARADQLKRENESR-----RFLSLVR 1839
>gi|295668168|ref|XP_002794633.1| DNA mismatch repair protein msh6 [Paracoccidioides sp. 'lutzii'
Pb01]
gi|226286049|gb|EEH41615.1| DNA mismatch repair protein msh6 [Paracoccidioides sp. 'lutzii'
Pb01]
Length = 1200
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+I D DR P HPDY+P+T+Y+PP K +P Q+W IK + +D V+FFK GKFYEL+
Sbjct: 330 NITDIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELY 389
Query: 237 HMDAVIG 243
DA IG
Sbjct: 390 ENDATIG 396
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 54/170 (31%), Positives = 85/170 (50%), Gaps = 15/170 (8%)
Query: 223 CVLFFKVGKFYELFHMDAVIGADEL--ACSYMKESGCTGESTLLTQLCNYESQTPSGCFP 280
CV F F + + + G +++ +KE+G +GE ++ QL + P
Sbjct: 689 CVTPFGKRMFKQWDFLRVLEGFEQIDYTMGLLKETG-SGEG-VIGQLVS--------SMP 738
Query: 281 DMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFG 340
D+S LKY++ AFD +A +G ++P+AGV++++D D+I IE E+ L+ G
Sbjct: 739 DLSGHLKYWKTAFDRSKAKDSGILVPEAGVEEDFDVSHDKITEIEYELDQLLKRVRKQLG 798
Query: 341 CTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
T I K+ Y LEVP K S KS Q ATK+ + + PE R
Sbjct: 799 STAIVYRDNGKE-IYQLEVPIKITSVPKSWDQMSATKQ--AKRFYFPELR 845
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IG L FATHYHS+A P +A M D+
Sbjct: 1039 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLAAEFEGHPEIAPRRMRIHVDEEER 1098
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLYKL G+ SFG + A + GIP VV+ A Q E L++
Sbjct: 1099 ---RVTFLYKLEEGVAEGSFGMHCASMCGIPNKVVERAEIAAKQWEHTSRLKE 1148
>gi|151942085|gb|EDN60441.1| MutS-like protein [Saccharomyces cerevisiae YJM789]
Length = 1242
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 69/209 (33%), Positives = 100/209 (47%), Gaps = 29/209 (13%)
Query: 49 SAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEE----ELEESVEDPT 104
+AKR K + DSE D EDEY+P K + + + + + +E EL E D
Sbjct: 155 TAKRKKGKV-VDSESD--------EDEYLPDKNDGDEDDDIADDKEDIKGELAEDSGDDD 205
Query: 105 PSSSEAEVTPMKNGNK----------RGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSE 154
S AE T K + R +S + + +P APS TPS
Sbjct: 206 DLISLAETTSKKKFSNNTSHSSSPFTRNISRNNSKKKSRPN-QAPSRSYTPSHR---QPS 261
Query: 155 TTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWW 214
T +S + YQ+L + DA RR P+Y+P+TLY+P K TP Q+W
Sbjct: 262 ATSKSSKFNKQNEERYQWLVDER--DAQRRPKSDPEYDPRTLYIPSSAWNKFTPFEKQYW 319
Query: 215 TIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
IKS+ +DC++FFK GKF+EL+ DA++
Sbjct: 320 EIKSKMWDCIVFFKKGKFFELYEKDALLA 348
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L I L FATHY ++A + P V MS + D +
Sbjct: 1065 RGGSSSDGFAIAESVLHHVATHIQSLGFFATHYGTLASSFKHHPQVRPLKMSILVD---E 1121
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
+ FLYK++ G SFG +VA + GI ++++ A +E H R + A
Sbjct: 1122 ATRNVTFLYKMLEGQSEGSFGMHVASMCGISKEIIDNAQIAADNLE--HTSRLVKERDLA 1179
Query: 509 SLVKSGEKVDV 519
+ +GE V V
Sbjct: 1180 ANNLNGEVVSV 1190
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 270 YESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQ 329
Y S P G + E +K + NAF+ ++A + I+P+ G D E+D+ MD I+ +E E+
Sbjct: 745 YISSFPEG----LVEAVKSWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDELM 800
Query: 330 TYLRTQCAHFGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPE 388
L T F C+ I Y ++ K + Y +E+P SN ++A K + Y + E
Sbjct: 801 EILMTYRKQFKCSNIQYKDSGK--EIYTIEIPISATKNVPSNWVQMAA-NKTYKRYYSDE 857
Query: 389 CRGTGTN--DGCVIARVTLEKFLQIGCLTVFATHYHSV 424
R + + I + TLE+ L+ F HY+++
Sbjct: 858 VRALARSMAEAKEIHK-TLEEDLKNRLCQKFDAHYNTI 894
>gi|449016696|dbj|BAM80098.1| mutS family DNA mismatch repair protein MSH6 [Cyanidioschyzon
merolae strain 10D]
Length = 1108
Score = 82.0 bits (201), Expect = 8e-13, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Query: 136 LTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKT 195
L+ +TP P + + ++ +WS H +H + D+ RSP P Y+P T
Sbjct: 153 LSESATPKRTHGPQTHVKWSANGSAAVDEWSAQHPWSVH---VRDSAGRSPTDPHYDPST 209
Query: 196 LYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSY 251
++VPPE +K TP Q+W IK +D VL FK GKFYE + +DA IG L +Y
Sbjct: 210 VFVPPEAERKMTPFQLQFWKIKRNYYDTVLLFKKGKFYECYDIDADIGHRVLQLNY 265
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 52/113 (46%), Gaps = 21/113 (18%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEP---------------- 432
RGT T DG IA L + CLT+FATHYH +A P
Sbjct: 985 RGTSTFDGYAIAYSALWYLTFRTRCLTLFATHYHMLATEPLLRPAHHHHHHRSGDDDDDA 1044
Query: 433 -NVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
+V F +M + + I FLY+L PG+ S G A LAGIPEDV++
Sbjct: 1045 VSVVFAHMG---ARVDTNAHEIAFLYRLRPGVAAHSRGIECARLAGIPEDVIQ 1094
>gi|50306061|ref|XP_452992.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|49642125|emb|CAH01843.1| KLLA0C17732p [Kluyveromyces lactis]
Length = 1194
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 46/114 (40%), Positives = 65/114 (57%), Gaps = 8/114 (7%)
Query: 130 PTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHP 189
P +KP P+ S P+ P S T + + + YQ+L H DA+ R P
Sbjct: 204 PARKPLAYNPNR-SLPATPKSQGKHTKFNKTNGE-----RYQWLV--HERDAEGRDKSDP 255
Query: 190 DYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
DY+P+TLY+P + K TP Q+W IKS+ +DC+LFFK GKF+EL+ DA +G
Sbjct: 256 DYDPRTLYIPGDAWSKFTPFEKQYWEIKSKMWDCILFFKKGKFFELYEKDAHLG 309
Score = 62.8 bits (151), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 44/122 (36%), Positives = 56/122 (45%), Gaps = 15/122 (12%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI--EDKR 446
RG ++DG IA L I L FATHY ++ PNV M+ + E+ R
Sbjct: 1021 RGGSSSDGFAIAEAVLHHVATHIQSLGFFATHYAALGSSFTNHPNVQPLKMAILVDEESR 1080
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME-------ARHNL 499
N + FLYKLV G SFG +VA + GIP VV + A +E R NL
Sbjct: 1081 N-----VTFLYKLVDGKSDGSFGMHVASMCGIPRSVVDNASIAAENLEHTSKLIKERKNL 1135
Query: 500 RQ 501
Q
Sbjct: 1136 HQ 1137
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 24/63 (38%), Positives = 38/63 (60%), Gaps = 4/63 (6%)
Query: 267 LCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEK 326
L +Y ++ PS ++ +L+ + NAFD A G I+P GV+ E+DE MD I+ IE
Sbjct: 698 LKSYLTEIPSS----LTTVLEAWSNAFDRNLAVKDGVIVPNRGVEPEFDESMDRIQGIED 753
Query: 327 EIQ 329
++Q
Sbjct: 754 QLQ 756
>gi|226291537|gb|EEH46965.1| DNA mismatch repair protein msh6 [Paracoccidioides brasiliensis
Pb18]
Length = 1207
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+I D DR P HPDY+P+T+Y+PP K +P Q+W IK + +D V+FFK GKFYEL+
Sbjct: 281 NITDIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELY 340
Query: 237 HMDAVIG 243
DA IG
Sbjct: 341 ENDATIG 347
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IG L FATHYHS+A P +A M D+
Sbjct: 1046 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLAAEFEGHPEIAPRRMRIHVDEEER 1105
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLYKL G+ SFG + A + GIP VV+ A Q E L++
Sbjct: 1106 ---RVTFLYKLEEGVAEGSFGMHCASMCGIPNKVVERAEIAAKQWEHTSRLKE 1155
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/165 (32%), Positives = 84/165 (50%), Gaps = 22/165 (13%)
Query: 226 FFKVGKFYELFHMDAVIGADELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSEL 285
F +V + +E +D +G +KE+G +GE ++ QL + PD+S
Sbjct: 710 FLRVLEGFE--QIDYTMG-------LLKETG-SGEG-VIGQLVS--------SMPDLSGH 750
Query: 286 LKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIY 345
LKY++ AFD +A +G ++P+AGV++++D D+I IE E+ L+ G T I
Sbjct: 751 LKYWKTAFDRSKAKDSGILVPEAGVEEDFDVSHDKITEIEYELDQLLKRVRKQLGSTAIV 810
Query: 346 SEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
K+ Y LEVP K S KS Q ATK+ + + PE R
Sbjct: 811 YRDNGKE-IYQLEVPIKIKSVPKSWDQMSATKQ--AKRFYFPELR 852
>gi|19075844|ref|NP_588344.1| DNA mismatch repair protein [Schizosaccharomyces pombe 972h-]
gi|39931686|sp|O74502.1|MSH6_SCHPO RecName: Full=DNA mismatch repair protein msh6
gi|6644186|gb|AAF20943.1|AF207839_1 mismatch repair protein Msh6 [Schizosaccharomyces pombe]
gi|3581916|emb|CAA20855.1| MutS protein homolog [Schizosaccharomyces pombe]
Length = 1254
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/106 (41%), Positives = 57/106 (53%), Gaps = 4/106 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L + IGCL F+THY S+ V M+ D++
Sbjct: 1107 RGTSTYDGHAIAYAVLHHLVSNIGCLGFFSTHYQSLCVDFMHHRQVRLMQMAAAVDEK-- 1164
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
I + FLYKL GICPKS+G NVA +AG+PE V+ A ++E
Sbjct: 1165 -IRRVTFLYKLEDGICPKSYGMNVASMAGLPEKVIDAAEEKASELE 1209
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 59/190 (31%), Positives = 87/190 (45%), Gaps = 5/190 (2%)
Query: 57 IQSDSEPDDMLQ-DNGSE--DEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVT 113
I SD E DD ++ D+ SE E P EVES E G + SV P P + +
Sbjct: 224 IVSDDESDDYVEPDHISEASSEASLPIDEVESMDEDVDGYSDHSVSVAAPIPKKESRKES 283
Query: 114 PMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFL 173
L S+ P+ +A T S + ++ + + ++ Y++L
Sbjct: 284 SNSLYESYRLGSQIASPSPSVSGSASPTKSNKNGVLNREEKRRQRMEAFKKENNERYEWL 343
Query: 174 HPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFY 233
+ DAD+ P+Y+P+TLY+PP P Q+W IK D V+FF+ GKFY
Sbjct: 344 L--DVRDADQNRVGDPNYDPRTLYIPPSAWATFKPFEKQFWKIKKDLMDTVVFFQKGKFY 401
Query: 234 ELFHMDAVIG 243
EL+ DA IG
Sbjct: 402 ELYENDAAIG 411
>gi|449543528|gb|EMD34504.1| hypothetical protein CERSUDRAFT_97762 [Ceriporiopsis subvermispora B]
Length = 1096
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 61/108 (56%), Gaps = 3/108 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRL-REEP-NVAFEYMSYIEDKR 446
RGT T DG +A L+ ++ C T+F THY VA L R P +V +M + ED R
Sbjct: 945 RGTSTFDGMAVASAVLQHLVENRKCKTLFITHYPHVAIDLERRFPHDVRNMHMGFTEDTR 1004
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
DG + FLY+L PGI +SFG A LAG+PE +++ T A M+
Sbjct: 1005 IDGTREVTFLYRLTPGITTESFGVECARLAGLPESILRLATEKARSMQ 1052
>gi|239611022|gb|EEQ88009.1| DNA mismatch repair protein msh6 [Ajellomyces dermatitidis ER-3]
Length = 1170
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+I D DR P HPDY+P+T+Y+PP K +P Q+W IK + +D V+FFK GKFYEL+
Sbjct: 254 NITDIDRNPPGHPDYDPRTIYIPPLAWSKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELY 313
Query: 237 HMDAVIG 243
DA IG
Sbjct: 314 ENDATIG 320
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT + DG +A+ L IG L FATHYHS+ P +A M +++D+
Sbjct: 1008 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLTAEFEGHPEIAPRRMRIHVDDEEK 1067
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLYKL G+ SFG + A + GIP+ VV+ A Q E L++
Sbjct: 1068 ----RVTFLYKLEDGVAEGSFGMHCASMCGIPDKVVERAEVAAKQWEHTSRLKE 1117
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 11/133 (8%)
Query: 246 ELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNII 305
+ A +KE+G GE ++ QL PD+S L+Y++ AFD +A +G ++
Sbjct: 694 DYAMGLLKETG-PGEG-VIGQLV--------ASMPDLSGHLQYWKTAFDRTKAKDSGILV 743
Query: 306 PKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYAS 365
P+AGV++++D D I IE ++ L+ G I K+ Y LEVP K +
Sbjct: 744 PEAGVEEDFDASHDRISEIESDLDQLLKKVRKQLGSNAIVYRDNGKE-IYQLEVPIKIKN 802
Query: 366 KAKSNHQRVATKK 378
KS Q ATK+
Sbjct: 803 VPKSWDQMSATKQ 815
>gi|387825155|ref|YP_005824626.1| DNA mismatch repair protein MutS [Francisella cf. novicida 3523]
gi|332184621|gb|AEE26875.1| DNA mismatch repair protein MutS [Francisella cf. novicida 3523]
Length = 845
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG +A+ EKF QIG T+FATHY + ++ PNV + E K
Sbjct: 693 RGTSTFDGLALAKACAEKFAQIGAFTLFATHYFELTELAKQYPNVCNIHFEAKEYK---- 748
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
D I F++K V G KS+G VA+LAGI +DV+K + +E + L
Sbjct: 749 -DNIYFMHKAVTGAAKKSYGIQVAKLAGISQDVLKSAKQNLYNLEKKQQL 797
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGES 261
+ TP + Q+ IKSQ D +LF+++G FYELF DA A+ L + GES
Sbjct: 4 ISNHTPMIQQYLKIKSQYQDILLFYRMGDFYELFFDDAKKAAELLDITLTARGKSNGES 62
>gi|261206036|ref|XP_002627755.1| DNA mismatch repair protein msh6 [Ajellomyces dermatitidis
SLH14081]
gi|239592814|gb|EEQ75395.1| DNA mismatch repair protein msh6 [Ajellomyces dermatitidis
SLH14081]
Length = 1170
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+I D DR P HPDY+P+T+Y+PP K +P Q+W IK + +D V+FFK GKFYEL+
Sbjct: 254 NITDIDRNPPGHPDYDPRTIYIPPLAWSKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELY 313
Query: 237 HMDAVIG 243
DA IG
Sbjct: 314 ENDATIG 320
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT + DG +A+ L IG L FATHYHS+ P +A M +++D+
Sbjct: 1008 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLTAEFEGHPEIAPRRMRIHVDDEEK 1067
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLYKL G+ SFG + A + GIP+ VV+ A Q E L++
Sbjct: 1068 ----RVTFLYKLEDGVAEGSFGMHCASMCGIPDKVVERAEVAAKQWEHTSRLKE 1117
Score = 61.6 bits (148), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 43/133 (32%), Positives = 67/133 (50%), Gaps = 11/133 (8%)
Query: 246 ELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNII 305
+ A +KE+G GE ++ QL PD+S L+Y++ AFD +A +G ++
Sbjct: 694 DYAMGLLKETG-PGEG-VIGQLV--------ASMPDLSGHLQYWKTAFDRTKAKDSGILV 743
Query: 306 PKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYAS 365
P+AGV++++D D I IE ++ L+ G I K+ Y LEVP K +
Sbjct: 744 PEAGVEEDFDASHDRISEIESDLDQLLKKVRKQLGSNAIVYRDNGKE-IYQLEVPIKIKN 802
Query: 366 KAKSNHQRVATKK 378
KS Q ATK+
Sbjct: 803 VPKSWDQMSATKQ 815
>gi|258578083|ref|XP_002543223.1| DNA mismatch repair protein msh6 [Uncinocarpus reesii 1704]
gi|237903489|gb|EEP77890.1| DNA mismatch repair protein msh6 [Uncinocarpus reesii 1704]
Length = 1200
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 47/67 (70%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+ILD ++ P HPDY+P+TLY+PP K +P Q+W IK + +D V+FFK GKFYEL+
Sbjct: 283 NILDIEKNPPGHPDYDPRTLYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELY 342
Query: 237 HMDAVIG 243
DA IG
Sbjct: 343 ENDATIG 349
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 63/113 (55%), Gaps = 3/113 (2%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD++ LL+Y+E AFD +A +G IP+ GV++++D + I+S+E ++ L+
Sbjct: 741 MPDLTSLLQYWETAFDRVKAKDSGTFIPQPGVEEDFDASNERIESLEGDLNQLLKRCRRE 800
Query: 339 FGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRG 391
C+ I K+ Y LEVP K + KS Q ATK+ V+ Y PE RG
Sbjct: 801 LNCSAIVYRDNGKE-IYQLEVPIKVKNIPKSWDQMSATKQ--VKRYYFPELRG 850
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 51/140 (36%), Positives = 64/140 (45%), Gaps = 11/140 (7%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI---EDK 445
RGT + DG +A+ L IG L FATHYHS+A P +A M ED+
Sbjct: 1042 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLAAEFEGHPEIAPRRMRIRVDEEDR 1101
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIH 505
R + FLYKL G+ SFG + A + GIP VV+ A Q E L+
Sbjct: 1102 R------VTFLYKLENGVAEGSFGMHCASMCGIPSKVVERAEVAAKQWEHTSRLKDSVER 1155
Query: 506 KFAS-LVKSGEKVDVEELQK 524
K S LV G DV + K
Sbjct: 1156 KKGSGLVGLGWWSDVAWILK 1175
>gi|408397888|gb|EKJ77025.1| hypothetical protein FPSE_02669 [Fusarium pseudograminearum CS3096]
Length = 1105
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA+ L+ + + CLT+F THY ++AR V +M + +K D
Sbjct: 964 RGTSTHDGAAIAQAVLQHVVTETQCLTLFITHYQNLARVAEGLDGVKNVHMKFKAEKGED 1023
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
G + + FLY++ G+ +S+G NVA LA IP+ V+ + Q+E +R+L
Sbjct: 1024 GEEEVTFLYEVGEGVAHRSYGLNVARLARIPKKVIDVAALKSSQIEQEMKMRRL 1077
>gi|213406337|ref|XP_002173940.1| DNA mismatch repair protein msh6 [Schizosaccharomyces japonicus
yFS275]
gi|212001987|gb|EEB07647.1| DNA mismatch repair protein msh6 [Schizosaccharomyces japonicus
yFS275]
Length = 1178
Score = 81.6 bits (200), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 42/106 (39%), Positives = 58/106 (54%), Gaps = 4/106 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L + IGCL F+THY S+ + MS + D+
Sbjct: 1031 RGTSTYDGQAIAYAVLHHLVSNIGCLGFFSTHYQSLCTDFVHHKQLRMMQMSALVDEAGR 1090
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ FLYKLV G+C KS+G NVA +A +PE+VV+ T + ++E
Sbjct: 1091 ---RVTFLYKLVDGVCSKSYGMNVASMASVPEEVVQVAETKSLELE 1133
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 82/179 (45%), Gaps = 13/179 (7%)
Query: 76 YVPPK---AEVESESEHSSGEEELEESVED---PTPSSSEAEVTPMKNG--NKRGLSSKS 127
YVPP A E E + +E+ + V D P P+ S P +G + + S S
Sbjct: 158 YVPPASSPAANEDEEMLDAVDEDEDLIVSDDEKPKPAVSRQPRKPRSSGALDAFRMGSTS 217
Query: 128 GQPTKKPKLTAPSTPSTPS---FPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRR 184
P+ + STPS S +S + + + + Y++L I DAD
Sbjct: 218 DTPSASESTSRMSTPSMSSGRNNVLSRDEKRKVRMAAFEKTNAGRYEWLL--DIRDADGN 275
Query: 185 SPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
P DY+P+TLY+PP P Q+W IK D V+FF+ GKFYEL+ DA IG
Sbjct: 276 RPTDEDYDPRTLYIPPSAWASFKPFEKQYWEIKKNLMDTVVFFQKGKFYELYENDAAIG 334
>gi|392300210|gb|EIW11301.1| Msh6p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 1242
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 98/213 (46%), Gaps = 37/213 (17%)
Query: 49 SAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEE----ELEESVEDPT 104
+AKR K + DSE D EDEY+P K + + + + + +E EL E D
Sbjct: 155 TAKRKKGKV-VDSESD--------EDEYLPDKNDGDEDDDIADDKEDIKGELAEDSGDDD 205
Query: 105 PSSSEAEVT--------------PMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVS 150
S AE T P R S K +P + P + + S PS
Sbjct: 206 DLISLAETTSKKKFSNNTSHSSSPFTRNISRNNSKKKSRPNQAPIRSYTPSHSQPS---- 261
Query: 151 DTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCM 210
T +S + YQ+L + DA RR P+Y+P+TLY+P K TP
Sbjct: 262 ----ATSKSSKFNKQNEERYQWLVDER--DAQRRPKSDPEYDPRTLYIPSSAWNKFTPFE 315
Query: 211 GQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
Q+W IKS+ +DC++FFK GKF+EL+ DA++
Sbjct: 316 KQYWEIKSKMWDCIVFFKKGKFFELYEKDALLA 348
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L I L FATHY ++A + P V MS + D +
Sbjct: 1065 RGGSSSDGFAIAESVLHHVATHIQSLGFFATHYGTLASSFKHHPQVRPLKMSILVD---E 1121
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
+ FLYK++ G SFG +VA + GI ++++ A +E H R + A
Sbjct: 1122 ATRNVTFLYKMLEGQSEGSFGMHVASMCGISKEIIDNAQIAADNLE--HTSRLVKERDLA 1179
Query: 509 SLVKSGEKVDV 519
+ +GE V V
Sbjct: 1180 ANNLNGEVVSV 1190
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 270 YESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQ 329
Y S P G + E +K + NAF+ ++A + I+P+ G D E+D+ MD I+ +E E+
Sbjct: 745 YISSFPEG----LVEAVKSWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDELM 800
Query: 330 TYLRTQCAHFGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPE 388
L T F C+ I Y ++ K+ Y +E+P SN ++A K + Y + E
Sbjct: 801 EILMTYRKQFKCSNIQYKDSGKEI--YTIEIPISATKNVPSNWVQMAA-NKTYKRYYSDE 857
Query: 389 CRGTGTN--DGCVIARVTLEKFLQIGCLTVFATHYHSV 424
R + + I + TLE+ L+ F HY+++
Sbjct: 858 VRALARSMAEAKEIHK-TLEEDLKNRLCQKFDAHYNTI 894
>gi|46125469|ref|XP_387288.1| hypothetical protein FG07112.1 [Gibberella zeae PH-1]
Length = 1105
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 65/114 (57%), Gaps = 1/114 (0%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA+ L+ + + CLT+F THY ++AR V +M + +K D
Sbjct: 964 RGTSTHDGAAIAQAVLQHVVTETRCLTLFITHYQNLARVAEGLDGVKNVHMKFKAEKGED 1023
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
G + + FLY++ G+ +S+G NVA LA IP+ V+ + Q+E +R+L
Sbjct: 1024 GEEEVTFLYEVGEGVAHRSYGLNVARLARIPKKVIDVAALKSSQIEQEMKMRRL 1077
>gi|225556818|gb|EEH05106.1| DNA mismatch repair protein msh6 [Ajellomyces capsulatus G186AR]
Length = 1189
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+I D DR P HPDY+P+T+Y+PP K +P Q+W IK + +D ++FFK GKFYEL+
Sbjct: 305 NITDIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFWDTIVFFKKGKFYELY 364
Query: 237 HMDAVIG 243
DA IG
Sbjct: 365 ENDATIG 371
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IG L FATHYHS+A P +A M D+
Sbjct: 1027 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLASEFEGHPEIAPRRMRIHVDEEER 1086
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLYKL GI SFG + A + GIP VV+ A Q E L++
Sbjct: 1087 ---RVTFLYKLEEGIAEGSFGMHCASMCGIPNKVVERAEIAAKQWEHTSRLKE 1136
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD++ L+Y++ AFD +A +G ++P+AGV++++D D I IE ++ L+
Sbjct: 768 MPDLNGYLQYWKTAFDRTKAKDSGILVPEAGVEEDFDASHDRISEIESDLDRLLKEVRKK 827
Query: 339 FGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
G I K+ Y LEVP K + K Q ATK+ + + PE R
Sbjct: 828 LGSNAIVYRDNGKE-IYQLEVPIKIKNVPKDWDQMSATKQ--AKRFYFPELR 876
>gi|156837100|ref|XP_001642584.1| hypothetical protein Kpol_1075p4 [Vanderwaltozyma polyspora DSM
70294]
gi|156113131|gb|EDO14726.1| hypothetical protein Kpol_1075p4 [Vanderwaltozyma polyspora DSM
70294]
Length = 1251
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 66/107 (61%), Gaps = 4/107 (3%)
Query: 137 TAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTL 196
+ PS PSTP PV + ++ ++ ++ + YQ+L I DA +R P+Y+P+TL
Sbjct: 254 SVPSKPSTPR-PVKKINNSSKHSNFNKE-NEERYQWLV--DIRDAQKRPISDPEYDPRTL 309
Query: 197 YVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
Y+P K T Q+W IKS+ +DCV+FFK GKF+EL+ DA++G
Sbjct: 310 YIPSSAWNKFTAFEKQYWEIKSKMWDCVVFFKKGKFFELYEKDAMLG 356
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG +NDG IA L + L FATHY S+ + P V MS + D +
Sbjct: 1075 RGGSSNDGFAIAESVLYHVATHMQSLGFFATHYGSLGLSFKGHPQVRPLKMSILVD---E 1131
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
G I FLYKLV G SFG +VA + GIP+ +V A E LR+
Sbjct: 1132 GTRNITFLYKLVEGQSEGSFGMHVASMCGIPKKIVDNAQVAAETYEHTSILRR 1184
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 35/107 (32%), Positives = 59/107 (55%), Gaps = 14/107 (13%)
Query: 263 LLTQLCN---------YESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKE 313
LLT++ N + SQ P F D+++ + NAFD ++A + P +GV+ E
Sbjct: 739 LLTKISNQNFNGALGVFVSQIPESLFQDVAK----WTNAFDREKAIVEDVMEPHSGVEPE 794
Query: 314 YDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVP 360
+DE +D+IK IE+++ +LR F C+ I+ + K+ Y +EVP
Sbjct: 795 FDESLDKIKGIEEDLNDHLRRYKKEFKCSTIHFKDSGKE-IYTIEVP 840
>gi|154275572|ref|XP_001538637.1| hypothetical protein HCAG_06242 [Ajellomyces capsulatus NAm1]
gi|150415077|gb|EDN10439.1| hypothetical protein HCAG_06242 [Ajellomyces capsulatus NAm1]
Length = 1188
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+I D DR P HPDY+P+T+Y+PP K +P Q+W IK + +D ++FFK GKFYEL+
Sbjct: 305 NITDIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFWDTIVFFKKGKFYELY 364
Query: 237 HMDAVIG 243
DA IG
Sbjct: 365 ENDATIG 371
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IG L FATHYHS+A P +A M D+
Sbjct: 1070 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLASEFEGHPEIAPRRMRIHVDEEER 1129
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLYKL GI SFG + A + GIP VV+ A Q E L++
Sbjct: 1130 ---RVTFLYKLEEGIAEGSFGMHCASMCGIPNKVVERAEIAAKQWEHTSRLKE 1179
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 37/112 (33%), Positives = 58/112 (51%), Gaps = 3/112 (2%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD+S L+Y++ AFD +A +G ++P+AGV++++D D I IE ++ L+
Sbjct: 768 MPDLSGYLQYWKTAFDRTKAKDSGILVPEAGVEEDFDASHDRISEIESDLDQLLKEVRKK 827
Query: 339 FGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
G I K+ Y LEVP K + K Q ATK+ + + PE R
Sbjct: 828 LGSNAIVYRDNGKE-IYQLEVPIKIKNVPKDWDQMSATKQ--AKRFYFPELR 876
>gi|398365559|ref|NP_010382.3| mismatch repair ATPase MSH6 [Saccharomyces cerevisiae S288c]
gi|3024187|sp|Q03834.1|MSH6_YEAST RecName: Full=DNA mismatch repair protein MSH6; AltName: Full=MutS
protein homolog 6; AltName: Full=Postmeiotic segregation
protein 3
gi|633631|emb|CAA87671.1| probable DNA repair protein [Saccharomyces cerevisiae]
gi|285811118|tpg|DAA11942.1| TPA: mismatch repair ATPase MSH6 [Saccharomyces cerevisiae S288c]
Length = 1242
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 98/213 (46%), Gaps = 37/213 (17%)
Query: 49 SAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEE----ELEESVEDPT 104
+AKR K + DSE D EDEY+P K + + + + + +E EL E D
Sbjct: 155 TAKRKKGKV-VDSESD--------EDEYLPDKNDGDEDDDIADDKEDIKGELAEDSGDDD 205
Query: 105 PSSSEAEVT--------------PMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVS 150
S AE T P R S K +P + P + + S PS
Sbjct: 206 DLISLAETTSKKKFSYNTSHSSSPFTRNISRDNSKKKSRPNQAPSRSYNPSHSQPS---- 261
Query: 151 DTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCM 210
T +S + YQ+L + DA RR P+Y+P+TLY+P K TP
Sbjct: 262 ----ATSKSSKFNKQNEERYQWLVDER--DAQRRPKSDPEYDPRTLYIPSSAWNKFTPFE 315
Query: 211 GQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
Q+W IKS+ +DC++FFK GKF+EL+ DA++
Sbjct: 316 KQYWEIKSKMWDCIVFFKKGKFFELYEKDALLA 348
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L I L FATHY ++A + P V MS + D +
Sbjct: 1065 RGGSSSDGFAIAESVLHHVATHIQSLGFFATHYGTLASSFKHHPQVRPLKMSILVD---E 1121
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
+ FLYK++ G SFG +VA + GI ++++ A +E H R + A
Sbjct: 1122 ATRNVTFLYKMLEGQSEGSFGMHVASMCGISKEIIDNAQIAADNLE--HTSRLVKERDLA 1179
Query: 509 SLVKSGEKVDV 519
+ +GE V V
Sbjct: 1180 ANNLNGEVVSV 1190
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 270 YESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQ 329
Y S P G + E +K + NAF+ ++A + I+P+ G D E+D+ MD I+ +E E+
Sbjct: 745 YISSFPEG----LVEAVKSWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDELM 800
Query: 330 TYLRTQCAHFGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPE 388
L T F C+ I Y ++ K+ Y +E+P SN ++A K + Y + E
Sbjct: 801 EILMTYRKQFKCSNIQYKDSGKEI--YTIEIPISATKNVPSNWVQMAA-NKTYKRYYSDE 857
Query: 389 CRGTGTN--DGCVIARVTLEKFLQIGCLTVFATHYHSV 424
R + + I + TLE+ L+ F HY+++
Sbjct: 858 VRALARSMAEAKEIHK-TLEEDLKNRLCQKFDAHYNTI 894
>gi|340966746|gb|EGS22253.1| DNA mismatch repair protein msh6-like protein [Chaetomium
thermophilum var. thermophilum DSM 1495]
Length = 1238
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 35/67 (52%), Positives = 46/67 (68%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+ILDA++ P HPDY+P TLY+PP + +P Q+W IK +D V+FFK GKFYEL+
Sbjct: 325 NILDANKNPPGHPDYDPSTLYIPPSAERNFSPFEKQYWEIKKNLWDTVVFFKKGKFYELY 384
Query: 237 HMDAVIG 243
DA IG
Sbjct: 385 ENDATIG 391
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IGC+ FATHYHS+A P V M D++
Sbjct: 1083 RGTSSYDGVAVAQAVLHHVASHIGCVGFFATHYHSLAAEFAHHPEVRARRMQIAVDEKER 1142
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLYKL G+ SFG + A + GIP+ VV A + E L++
Sbjct: 1143 ---RVTFLYKLEDGVAEGSFGMHCASMCGIPKKVVDRAEVAAKEWEHTSRLKE 1192
Score = 59.3 bits (142), Expect = 5e-06, Method: Compositional matrix adjust.
Identities = 32/85 (37%), Positives = 50/85 (58%), Gaps = 3/85 (3%)
Query: 277 GCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQC 336
P++ E L Y+ENAFD K+A IP+ GVD+++D DEI+ I+ E+ + L Q
Sbjct: 780 AAMPNLKEPLAYWENAFDKKKAKEEKVFIPERGVDEDFDRTADEIERIKDELNSLLEKQK 839
Query: 337 AHFGC-TVIYSEAQKKQKKYVLEVP 360
A C T+ +++ K+ Y +EVP
Sbjct: 840 AALKCKTLKFTDVGKEI--YQIEVP 862
>gi|440297793|gb|ELP90434.1| DNA mismatch repair protein msH6, putative [Entamoeba invadens IP1]
Length = 959
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 45/104 (43%), Positives = 61/104 (58%), Gaps = 10/104 (9%)
Query: 390 RGTGTNDGCVIAR-VTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYM--SYIEDKR 446
RGT T+DG IA V L I L + +THYH + + +V +M + +E+K
Sbjct: 832 RGTSTHDGLAIAHAVVLYTIKHIKPLLIVSTHYHQLCEEFGDRGDVKLSHMGCTIVENK- 890
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
IVFLYKL+ G CPKS+G VAE+AGIP+DVVK ++A
Sbjct: 891 ------IVFLYKLLDGSCPKSYGMKVAEMAGIPQDVVKRAESIA 928
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 59/121 (48%), Gaps = 11/121 (9%)
Query: 169 HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFK 228
Y+FL + D + P +Y+P +L +P L + TP Q+W IK NFD V+FF
Sbjct: 34 RYKFLQD--VKDKNGHKPGESEYDPTSLLIPKLTLAQMTPFEKQYWNIKKDNFDTVIFFA 91
Query: 229 VGKFYELFHMDAVIGADELACSY-----MKESGC--TGESTLLTQLCNYESQTPSGCFPD 281
GKFYEL+ DA I E+ M+ +G ST ++L N + GC +
Sbjct: 92 KGKFYELYENDADIANKEMDLKVVSRVNMRMAGVPKASFSTYASKLLNLGYKI--GCVDE 149
Query: 282 M 282
M
Sbjct: 150 M 150
>gi|256269843|gb|EEU05102.1| Msh6p [Saccharomyces cerevisiae JAY291]
Length = 1242
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 68/213 (31%), Positives = 98/213 (46%), Gaps = 37/213 (17%)
Query: 49 SAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEE----ELEESVEDPT 104
+AKR K + DSE D EDEY+P K + + + + + +E EL E D
Sbjct: 155 TAKRKKGKV-VDSESD--------EDEYLPDKNDGDEDDDIADDKEDIKGELAEDSGDDD 205
Query: 105 PSSSEAEVT--------------PMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVS 150
S AE T P R S K +P + P + + S PS
Sbjct: 206 DLISLAETTSKKKFSYNTSHSSSPFTRNISRDNSKKKSRPNQAPSRSYNPSHSQPS---- 261
Query: 151 DTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCM 210
T +S + YQ+L + DA RR P+Y+P+TLY+P K TP
Sbjct: 262 ----ATSKSSKFNKQNEERYQWLVDER--DAQRRPKSDPEYDPRTLYIPSSAWNKFTPFE 315
Query: 211 GQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
Q+W IKS+ +DC++FFK GKF+EL+ DA++
Sbjct: 316 KQYWEIKSKMWDCIVFFKKGKFFELYEKDALLA 348
Score = 58.5 bits (140), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L I L FATHY ++A + P V MS + D +
Sbjct: 1065 RGGSSSDGFAIAESVLHHVATHIQSLGFFATHYGTLASSFKHHPQVRPLKMSILVD---E 1121
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
+ FLYK++ G SFG +VA + GI ++++ A +E H R + A
Sbjct: 1122 ATRNVTFLYKMLEGQSEGSFGMHVASMCGISKEIIDNAQIAADNLE--HTSRLVKERDLA 1179
Query: 509 SLVKSGEKVDV 519
+ +GE V V
Sbjct: 1180 ANNLNGEVVSV 1190
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 270 YESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQ 329
Y S P G + E +K + NAF+ ++A + I+P+ G D E+D+ MD I+ +E E+
Sbjct: 745 YISSFPEG----LVEAVKSWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDELM 800
Query: 330 TYLRTQCAHFGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPE 388
L T F C+ I Y ++ K+ Y +E+P SN ++A K + Y + E
Sbjct: 801 EILMTYRKQFKCSNIQYKDSGKEI--YTIEIPISATKNVPSNWVQMAA-NKTYKRYYSDE 857
Query: 389 CRGTGTN--DGCVIARVTLEKFLQIGCLTVFATHYHSV 424
R + + I + TLE+ L+ F HY+++
Sbjct: 858 VRALARSMAEAKEIHK-TLEEDLKNRLCQKFDAHYNTI 894
>gi|302773165|ref|XP_002970000.1| hypothetical protein SELMODRAFT_410679 [Selaginella moellendorffii]
gi|300162511|gb|EFJ29124.1| hypothetical protein SELMODRAFT_410679 [Selaginella moellendorffii]
Length = 1232
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%)
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
D+ R P+++ +TL++P EF+K T QWW K+++ D VL FK+GKFYE+F MD
Sbjct: 258 DSSGRRHDWPNFDSRTLFLPAEFVKGLTGGQRQWWEFKAKHMDKVLLFKMGKFYEMFEMD 317
Query: 240 AVIGADELACSYMK 253
A +GA +L YMK
Sbjct: 318 AHVGAQDLDLQYMK 331
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 35/89 (39%), Positives = 52/89 (58%), Gaps = 1/89 (1%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA L + C +F++HYH +A +P+V+ +M+ N+
Sbjct: 1050 RGTATSDGQAIAHAVLHYLAHNVQCRGMFSSHYHKLASDFANDPSVSLCHMACKVGGGNN 1109
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAG 477
++ + FLYKL G CPKS+G NVA +AG
Sbjct: 1110 ELEAVTFLYKLTSGSCPKSYGVNVARIAG 1138
Score = 42.4 bits (98), Expect = 0.68, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
FPD+ LL+YFE++FD E+ + G + G D D +++++YL++Q
Sbjct: 747 FPDLKPLLQYFEDSFDWSESEANGRV---TGGDHSNLSASDP----REKLESYLKSQQKF 799
Query: 339 FGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
F I S + Y+LE+P + +K S+++ + + +K Y TP +
Sbjct: 800 FKNPEI-SYVTVGKDTYLLEIPEELHTKVPSDYE-LRSSRKGFCRYWTPRVK 849
>gi|342866487|gb|EGU72148.1| hypothetical protein FOXB_17392 [Fusarium oxysporum Fo5176]
Length = 1108
Score = 81.3 bits (199), Expect = 1e-12, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 64/114 (56%), Gaps = 1/114 (0%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA+ L+ + + CLT+F THY ++AR V +M + +K D
Sbjct: 967 RGTSTHDGAAIAQAVLQHVVTETRCLTLFITHYQNLARVAEGLDGVKNVHMKFKAEKGED 1026
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
G + + FLY++ G+ +S+G NVA LA IP+ V+ + QME +R+
Sbjct: 1027 GEEQVTFLYEVGEGVAHRSYGLNVARLARIPKKVIDVAALKSGQMEQEMKIRRF 1080
>gi|336109956|gb|AEI16746.1| mutS protein 6 [Smaug mossambicus]
Length = 355
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 33/59 (55%), Positives = 44/59 (74%)
Query: 195 TLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
TL+VP ++L TP M +WW +KSQNFD V+ +KVGKFYEL+HMDAV+ +L +MK
Sbjct: 1 TLFVPEDYLXNCTPGMRKWWELKSQNFDSVICYKVGKFYELYHMDAVVAVSKLGLEFMK 59
>gi|302799426|ref|XP_002981472.1| hypothetical protein SELMODRAFT_114224 [Selaginella moellendorffii]
gi|300151012|gb|EFJ17660.1| hypothetical protein SELMODRAFT_114224 [Selaginella moellendorffii]
Length = 975
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 49/74 (66%)
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
D+ R P+++ +TL++P EF+K T QWW K+++ D VL FK+GKFYE+F MD
Sbjct: 26 DSSGRRHDWPNFDSRTLFLPAEFVKGLTGGQRQWWEFKAKHMDKVLLFKMGKFYEMFEMD 85
Query: 240 AVIGADELACSYMK 253
A +GA +L YMK
Sbjct: 86 AHVGAQDLDLQYMK 99
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 36/92 (39%), Positives = 54/92 (58%), Gaps = 1/92 (1%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA L + C +F++HYH +A +P+V+ +M+ N+
Sbjct: 816 RGTATSDGQAIAHAVLHYLAHNVQCRGMFSSHYHKLASDFANDPSVSLCHMACKVGGGNN 875
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPE 480
++ + FLYKL G CPKS+G NVA +AG P+
Sbjct: 876 ELEAVTFLYKLTSGSCPKSYGVNVARIAGKPK 907
Score = 42.0 bits (97), Expect = 0.92, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 9/112 (8%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
FPD+ LL+YFE++FD E+ + G + G D D +++++YL++Q
Sbjct: 513 FPDLKPLLQYFEDSFDWSESEANGRV---TGGDHSNLSASDP----REKLESYLKSQQKF 565
Query: 339 FGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
F I S + Y+LE+P + +K S+++ + + +K Y TP +
Sbjct: 566 FKNPEI-SYVTVGKDTYLLEIPEELHTKVPSDYE-LRSSRKGFCRYWTPRVK 615
>gi|409046449|gb|EKM55929.1| hypothetical protein PHACADRAFT_96015 [Phanerochaete carnosa
HHB-10118-sp]
Length = 900
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/98 (44%), Positives = 57/98 (58%), Gaps = 3/98 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI-GCLTVFATHYHSVARRL--REEPNVAFEYMSYIEDKR 446
RGT T DG IA LE + + GC T+F THY +VAR L R +V +M+Y ED R
Sbjct: 782 RGTSTFDGMAIAHAVLEHLVTVKGCKTLFITHYPTVARDLEHRFPQDVQNMHMAYTEDTR 841
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
DG + FLYKL G+ SFG A LAG+ E +++
Sbjct: 842 LDGTRQVTFLYKLSDGLTQNSFGVECARLAGLDEQILR 879
>gi|342876461|gb|EGU78072.1| hypothetical protein FOXB_11416 [Fusarium oxysporum Fo5176]
Length = 1228
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 48/71 (67%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+I+D D+R P HP+Y+ +T+Y+PP +K +P Q+W IK +D ++FFK GKFYEL+
Sbjct: 316 NIMDKDKRKPDHPEYDKRTIYIPPAAWQKFSPFETQYWKIKQNLWDTIVFFKKGKFYELY 375
Query: 237 HMDAVIGADEL 247
DA +G E
Sbjct: 376 ENDATVGHQEF 386
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT + DG +A+ L IGC+ FATHYHS+A P + M +++D+
Sbjct: 1075 RGTSSYDGVAVAQAVLHHVATHIGCVGYFATHYHSLATEFENHPEIRARRMQIHVDDEER 1134
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR 500
+ FLYKL G+ SFG + A + GI V+ A + E L+
Sbjct: 1135 ----RVTFLYKLEDGVAEGSFGMHCAAMCGISSRVIDRAEVAAKEWEHTSRLK 1183
Score = 47.8 bits (112), Expect = 0.018, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 61/112 (54%), Gaps = 6/112 (5%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
P++ E L Y+ +AFD +A +IP+ G+++++D+ D I+ I+++++ L +
Sbjct: 774 MPNLDEPLSYWRSAFDRSKARDEKLLIPERGIEEDFDQSSDRIEEIKQQLEDLLAEKKKE 833
Query: 339 FGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPEC 389
F C ++ +++ K + Y LE P K + Q AT K+V+ + PE
Sbjct: 834 FKCKLLKFTDVGK--EIYQLEAP-KSVKVPSTFRQMSAT--KDVKRWYFPEL 880
>gi|358381647|gb|EHK19322.1| hypothetical protein TRIVIDRAFT_81241 [Trichoderma virens Gv29-8]
Length = 1208
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 35/71 (49%), Positives = 47/71 (66%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+I D ++RSP PDY+P+TLY+PP K +P Q+W IK +D ++FFK GKFYEL+
Sbjct: 296 NIRDKEKRSPTDPDYDPRTLYIPPIAWNKFSPFEKQYWEIKQDLWDTIVFFKKGKFYELY 355
Query: 237 HMDAVIGADEL 247
DA IG E
Sbjct: 356 EKDATIGHQEF 366
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 56/113 (49%), Gaps = 6/113 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT + DG +A+ L IGC+ FATHYHS+A P + M +++D+
Sbjct: 1055 RGTSSYDGVAVAQAVLHHVATHIGCIGFFATHYHSLATEFENHPEIRARRMQIHVDDEER 1114
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR 500
I FLYKL G+ SFG + A + GI + V+K A + E L+
Sbjct: 1115 ----RITFLYKLEDGVAEGSFGMHCAAMCGISDRVIKRAEIAAKEWEHTSRLK 1163
Score = 43.9 bits (102), Expect = 0.26, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
P++ E L Y+ AFD ++A +IP++GVD+++D + I+ ++ ++ L + A
Sbjct: 754 MPNLEEPLAYWSTAFDRQKAKEEKLMIPESGVDEDFDASVARIEEVKNQLNDLLAEKKAE 813
Query: 339 FGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRG 391
C T+ +++ K+ Y +E P K S Q AT K+V+ + E G
Sbjct: 814 LKCKTLKFTDIGKEI--YQIEAP-KSVKIPSSWRQMSAT--KDVKRWYFTELTG 862
>gi|156339983|ref|XP_001620317.1| hypothetical protein NEMVEDRAFT_v1g223231 [Nematostella vectensis]
gi|156205075|gb|EDO28217.1| predicted protein [Nematostella vectensis]
Length = 357
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 38/66 (57%), Positives = 43/66 (65%), Gaps = 2/66 (3%)
Query: 190 DYNPKTLYVPPEFL--KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL 247
D T VP +L K TP M QWW +KS++FD VLFFKVGKFYEL+HMDA G EL
Sbjct: 71 DDEVNTAMVPQSYLTSKDVTPAMRQWWQLKSEHFDTVLFFKVGKFYELYHMDATTGVKEL 130
Query: 248 ACSYMK 253
YMK
Sbjct: 131 NLIYMK 136
>gi|190404939|gb|EDV08206.1| conserved hypothetical protein [Saccharomyces cerevisiae RM11-1a]
Length = 564
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 67/131 (51%), Gaps = 10/131 (7%)
Query: 113 TPMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQF 172
+P R S K +P + P + + S PS T +S + YQ+
Sbjct: 228 SPFTRNISRDNSKKKSRPNQAPSRSYNPSHSQPS--------ATSKSSKFNKQNEERYQW 279
Query: 173 LHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKF 232
L + DA RR P+Y+P+TLY+P K TP Q+W IKS+ +DC++FFK GKF
Sbjct: 280 LVDER--DAQRRPKSDPEYDPRTLYIPSSAWNKFTPFEKQYWEIKSKMWDCIVFFKKGKF 337
Query: 233 YELFHMDAVIG 243
+EL+ DA++
Sbjct: 338 FELYEKDALLA 348
>gi|71659563|ref|XP_821503.1| mismatch repair protein MSH6 [Trypanosoma cruzi strain CL Brener]
gi|70886884|gb|EAN99652.1| mismatch repair protein MSH6, putative [Trypanosoma cruzi]
Length = 1002
Score = 80.9 bits (198), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 73/141 (51%), Gaps = 25/141 (17%)
Query: 390 RGTGTNDGCVIARVTLEKF---LQIGCLTVFATHYHSVARR------------LREEPNV 434
RGT T+DG IA TL L + L +F+THYH++A+ R+ +V
Sbjct: 851 RGTSTHDGYAIAHATLHSLKERLPVSPLLLFSTHYHALAQEQLGGDAVNVSSLARDHGSV 910
Query: 435 A-FEYMSY-IEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQ 492
YM + I D + DG+ I FLY+LV G+C +S+G VA LAGIP +V + +
Sbjct: 911 VQLGYMDFAISDTKKDGVSAITFLYRLVSGVCTRSYGVEVALLAGIPSSLVHMAAIKSHE 970
Query: 493 MEAR-------HNLRQLFIHK 506
+ + H +RQ F+H+
Sbjct: 971 LASWNDRQKDIHTIRQ-FLHE 990
Score = 48.9 bits (115), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 193 PKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYM 252
P ++ +P + L Q+W IK++ FD ++ FK GKFYEL+ DA I E +
Sbjct: 30 PSSITIPAKELDAMAGMERQYWEIKAKYFDVLILFKKGKFYELYDQDAAIAHREFGLKLV 89
Query: 253 KESGCTGESTL 263
+ G+ L
Sbjct: 90 FSATNRGKMRL 100
>gi|156094380|ref|XP_001613227.1| DNA repair protein [Plasmodium vivax Sal-1]
gi|148802101|gb|EDL43500.1| DNA repair protein, putative [Plasmodium vivax]
Length = 1289
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI-GCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG IA TLE+ + C +F+THYH + ++ ++ +MS D D
Sbjct: 1143 RGTSSFDGTAIALSTLEQISDVVKCRCIFSTHYHLLVEEVKHNKKISNYHMSLSID---D 1199
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
+ I+FLYK + G+CPKSFG ++A+LAG+P++++
Sbjct: 1200 HQEKIIFLYKFIKGVCPKSFGIHIAKLAGLPKEIIDLA 1237
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 64/252 (25%), Positives = 113/252 (44%), Gaps = 28/252 (11%)
Query: 14 DSESSTPASSKGKKTSKSPAKSE----DDSPVTKRPRRKSAKRVKSAIQSDSE-----PD 64
D S SS GKK ++ + D++ ++ K+ K I S SE +
Sbjct: 115 DVSRSAVRSSMGKKGTEMKESYDKGYTDNAELSTEEDIIVRKKRKVIIDSSSEDVYDGSN 174
Query: 65 DMLQDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKR--- 121
D +DNG + P +E + +L V +P SS+ E + +
Sbjct: 175 DRSEDNGKNSKRKGPPG-----NEGVGVDGKLNNLVYEPGKSSTTEETLFTNEQSSKEII 229
Query: 122 GLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQF---LHPDHI 178
+ + G+ KK + S P+ +++ N ++F + P ++
Sbjct: 230 NIHRRKGEDGKKSQELDTLRNKLLSMPICLSNDKFRLYVEQYFLYCNTFEFPKWVQPQYV 289
Query: 179 LDADRRSPKHPDYNPKTLYVPP-------EFLKKQ-TPCMGQWWTIKSQNFDCVLFFKVG 230
D + R+P + DY+ T++ PP E+ + TP M Q+W IKS+NFD ++FFK+G
Sbjct: 290 RDLNLRTPDNADYDCSTIWTPPPDHPWAVEYKQAHYTPGMQQFWKIKSKNFDKIIFFKMG 349
Query: 231 KFYELFHMDAVI 242
+FYE+F++DA +
Sbjct: 350 RFYEIFYIDACL 361
>gi|358391487|gb|EHK40891.1| hypothetical protein TRIATDRAFT_78319 [Trichoderma atroviride IMI
206040]
Length = 1099
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA+ L + + CLT+F THY ++AR P V +M + K D
Sbjct: 958 RGTSTHDGAAIAQSVLHHVVTETRCLTLFITHYQNLARIADGLPGVTNVHMKFNAQKGED 1017
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
G + I FLY++ GI +S+G NVA LA IP+ V+ + Q+E R+L
Sbjct: 1018 GEEEITFLYEVGEGIAHRSYGLNVARLARIPKKVLDVAAGKSKQLENEMRRRRL 1071
>gi|327296443|ref|XP_003232916.1| DNA mismatch repair protein msh6 [Trichophyton rubrum CBS 118892]
gi|326465227|gb|EGD90680.1| DNA mismatch repair protein msh6 [Trichophyton rubrum CBS 118892]
Length = 1217
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/76 (48%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 168 NHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFF 227
N Y +L +I+D D+ HPDY+P+TLY+PP K +P Q+W IK + +D V+FF
Sbjct: 281 NRYPWLA--NIMDMDKNPLGHPDYDPRTLYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFF 338
Query: 228 KVGKFYELFHMDAVIG 243
K GKFYEL+ DA IG
Sbjct: 339 KKGKFYELYENDATIG 354
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IG L FATHYHS+A P +A M D D
Sbjct: 1055 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLAAEFEGHPEIAARRMRIHVD---D 1111
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLYKL G+ SFG + A + GIP VV+ A Q E +++
Sbjct: 1112 AERRVTFLYKLEDGVAEGSFGMHCASMCGIPSKVVEGAEVAAKQWEHTSRMKE 1164
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 73/146 (50%), Gaps = 13/146 (8%)
Query: 246 ELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNII 305
E +KE+G +G L+ QL + PD++ LLK++E AFD +A ++
Sbjct: 730 EYTMGLLKEAG-SGHG-LIGQLIS--------AMPDLNGLLKFWETAFDRAKARECDILV 779
Query: 306 PKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYAS 365
P+ V++E+D I+ +E E++ L+ C+ I + K+ Y LEVP K +
Sbjct: 780 PEESVEEEFDASKKNIEQLEDELEQVLQRTRKELKCSTIVFKDNGKE-IYQLEVPIKIKN 838
Query: 366 KAKSNHQRVATKKKNVENYVTPECRG 391
KS Q ATK+ V+ Y PE R
Sbjct: 839 IPKSWDQMSATKQ--VKRYYFPELRA 862
>gi|302657967|ref|XP_003020694.1| hypothetical protein TRV_05220 [Trichophyton verrucosum HKI 0517]
gi|291184551|gb|EFE40076.1| hypothetical protein TRV_05220 [Trichophyton verrucosum HKI 0517]
Length = 1217
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 168 NHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFF 227
N Y +L +I+D D+ HPDY+P+TLY+PP K +P Q+W IK + +D ++FF
Sbjct: 281 NRYPWLA--NIMDMDKNPLGHPDYDPRTLYIPPLAWTKFSPFEKQYWEIKQKFWDTIVFF 338
Query: 228 KVGKFYELFHMDAVIG 243
K GKFYEL+ DA IG
Sbjct: 339 KKGKFYELYENDATIG 354
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IG L FATHYHS+A P +A M D D
Sbjct: 1055 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLAAEFEGHPEIAARRMRIHVD---D 1111
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLYKL G+ SFG + A + GIP VV+ A Q E +++
Sbjct: 1112 AERRVTFLYKLEDGVAEGSFGMHCASMCGIPSKVVEGAEVAAKQWEHTSRMKE 1164
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 13/146 (8%)
Query: 246 ELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNII 305
E +KE+G +G L+ QL + PD++ LLK++E AFD +A + ++
Sbjct: 730 EYTMGLLKEAG-SGHG-LIGQLIS--------AMPDLNGLLKFWETAFDRSKARESDILV 779
Query: 306 PKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYAS 365
P+ G+++E+D I+ +E E++ L+ C+ I + K+ Y LEVP K +
Sbjct: 780 PEEGIEEEFDASKKNIEQLEDELEQVLQRTRRELKCSTIVFKDNGKE-IYQLEVPIKIKN 838
Query: 366 KAKSNHQRVATKKKNVENYVTPECRG 391
KS Q ATK+ V+ Y PE R
Sbjct: 839 IPKSWDQMSATKQ--VKRYYFPELRA 862
>gi|169596160|ref|XP_001791504.1| hypothetical protein SNOG_00833 [Phaeosphaeria nodorum SN15]
gi|160701244|gb|EAT92328.2| hypothetical protein SNOG_00833 [Phaeosphaeria nodorum SN15]
Length = 1217
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 34/64 (53%), Positives = 45/64 (70%)
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
DADR HPDY+P+TLY+PP + +P Q+W IKS+ +D ++FFK GKFYEL+ D
Sbjct: 301 DADRHPSDHPDYDPRTLYIPPGAMNAFSPFEKQYWEIKSKFWDTIVFFKKGKFYELYEKD 360
Query: 240 AVIG 243
A IG
Sbjct: 361 ASIG 364
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 51/95 (53%), Gaps = 4/95 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L ++GC+ FATHY S+A+ P V + M D+ +
Sbjct: 1061 RGTSSYDGVAVAQAVLHDIASRVGCVGFFATHYRSLAKEFEFHPEVQNKRMRIHVDESSK 1120
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
+I FLYKL G+ SFG + A + GIP ++
Sbjct: 1121 ---SITFLYKLEEGVAEGSFGMHCAAMCGIPSKII 1152
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 33/113 (29%), Positives = 55/113 (48%), Gaps = 6/113 (5%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD++ L+ +++AFD A G ++P+ GV++++D EI + + L+
Sbjct: 760 MPDLASALEPWKSAFDRDLAKKEGILVPEPGVEEDFDNSQQEIDECKANLDQLLKKARKE 819
Query: 339 FGCT-VIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
G +++ + K+ Y LEVP K + Q AT K V Y TPE R
Sbjct: 820 LGNNGIVFKDIGKEV--YQLEVPKK-VKVPNTWDQMSATAK--VSRYYTPELR 867
>gi|389584278|dbj|GAB67011.1| DNA repair protein [Plasmodium cynomolgi strain B]
Length = 1282
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 60/98 (61%), Gaps = 4/98 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI-GCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG IA TLE+ + C +F+THYH + ++ ++ +MS D D
Sbjct: 1139 RGTSSFDGTAIALSTLEQISDVLKCRCIFSTHYHLLVEEVKHNKKISNYHMSLSID---D 1195
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
+ I+FLYK + G+CPKSFG ++A+LAG+P++++
Sbjct: 1196 HQEKIIFLYKFIKGVCPKSFGIHIAKLAGLPKEIIDLA 1233
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 70/249 (28%), Positives = 116/249 (46%), Gaps = 22/249 (8%)
Query: 14 DSESSTPASSKGKK---TSKSPAKS-EDDSPVTKRPRRKSAKRVKSAIQSDSEP--DDML 67
D S SS GKK +S K ED++ ++ K+ K I S SE D
Sbjct: 119 DVNKSEVKSSMGKKEIEVKESYDKGYEDNAELSTEEDIIVRKKRKIIIDSSSEEIYDGSN 178
Query: 68 QDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKR---GLS 124
+ N S + V K +V S SE + +L V +P+ + E + + +
Sbjct: 179 ERNESNGKNV--KRKVLSGSEGVGVDGKLNNLVYEPSKNIKTEETLFTNEQSSKDIINIH 236
Query: 125 SKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQF---LHPDHILDA 181
+ G+ KK + S P+S +++ N ++F + P +I D
Sbjct: 237 RRKGEDGKKSQELDTLRNKLLSMPISLSNDKFRLYIEQYFLYCNTFEFPKWVQPQYIRDL 296
Query: 182 DRRSPKHPDYNPKTLYVPP-------EFLKKQ-TPCMGQWWTIKSQNFDCVLFFKVGKFY 233
+ R+P + DY+ T++ PP E+ + TP M Q+W IKS+NFD ++FFK+G+FY
Sbjct: 297 NLRTPDNADYDCSTIWTPPPDHPWAVEYKQAHYTPGMQQFWKIKSKNFDKIIFFKMGRFY 356
Query: 234 ELFHMDAVI 242
E+F++DA +
Sbjct: 357 EIFYIDACL 365
>gi|84784043|gb|ABC61986.1| MSH6-like protein [Trichomonas vaginalis]
Length = 1070
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L+ F+ ++ C VF THYH +A + P V M Y N
Sbjct: 909 RGTSTLDGIAIASSVLDFFINKVKCPLVFCTHYHVLAEEFEQFPMVRNASMKYEISNGN- 967
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
+ Y L+ +CP SFG VA++ G+P D+ + VA E RH A
Sbjct: 968 ----LTLAYTLIDKMCPSSFGCRVAKICGLPADLTEEAQKVADDFEDRH----------A 1013
Query: 509 SLVKSGEKVDVEELQKALESVKSFESQTKKDLEDLPGGVAG 549
+L SG V VE +++ + + KK ++DL GGV
Sbjct: 1014 ALRTSGIDVKVETIEERRDII-----DLKKAIDDLTGGVVN 1049
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 16/148 (10%)
Query: 101 EDPTPSSSEAEVTPMKNGNKRGL-SSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPST 159
E TPS S P K+ R + ++K+ P P P ++ + + S
Sbjct: 111 EQKTPSKSRTRTKPAKSTKSRSIKTTKAAVPFDAP-------PEVNHAQIAREASASVSE 163
Query: 160 SGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQ 219
DW + D +++ P Y+P T+Y+P + TP Q+W IK
Sbjct: 164 EDLPDWLTTKLR--------DKNKKRPDEEGYDPSTVYIPETVKETFTPFQKQFWDIKEN 215
Query: 220 NFDCVLFFKVGKFYELFHMDAVIGADEL 247
NFD ++ + GKFYE+F +DA+ D L
Sbjct: 216 NFDAIVMIRKGKFYEMFSVDAIFARDVL 243
Score = 42.7 bits (99), Expect = 0.46, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 242 IGADELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSA 301
+GA + C + + T +S LL + P G +++ + + +++ +
Sbjct: 572 LGALKKCCQFFTKIEGTVKSPLLANV------VPPGKGKSLAKQIDDILAELEVEKSIQS 625
Query: 302 GNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPS 361
I K GV K+ D++ +E+ SIE ++ LR GC + S + +K+ +++P
Sbjct: 626 NEFIVKKGVFKDIDDIDEEVSSIEDDLNDILRDIKREVGCKDL-SYVNMQSEKFQVQIPV 684
Query: 362 KYASKAKSNHQRVATKKKNVENYVTPECR 390
KY S + + ++ K+V Y TPE +
Sbjct: 685 KYCSDLPDKYI-LMSQTKSVRRYHTPEIK 712
>gi|336379827|gb|EGO20981.1| hypothetical protein SERLADRAFT_441366 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1060
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 68/115 (59%), Gaps = 7/115 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRL-REEPN-VAFEYMSYIEDKR 446
RGT T DG +A LE ++ + C T+F THY VA L R+ PN + +M Y + R
Sbjct: 937 RGTSTVDGMAVAHAVLEHLVRNVHCKTLFITHYPLVAVDLERKFPNAIQNLHMGYTAETR 996
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGT--TVAFQ--MEARH 497
+G I FLY+L+PGI +SFG A LAG+ E++++ T + ++Q +E RH
Sbjct: 997 INGTRDITFLYRLIPGIAAESFGVECARLAGVSEEILQVATERSQSYQCTIEKRH 1051
>gi|281206806|gb|EFA80990.1| Muts-like protein [Polysphondylium pallidum PN500]
Length = 1231
Score = 80.5 bits (197), Expect = 2e-12, Method: Compositional matrix adjust.
Identities = 40/88 (45%), Positives = 54/88 (61%), Gaps = 2/88 (2%)
Query: 156 TPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWT 215
TPS + + YQFL I DA++ P+Y+P TLY+P FL TP Q+W
Sbjct: 304 TPSKAKSSKKDDERYQFLV--DIADANQIKKGEPNYDPSTLYIPSTFLVNFTPFERQYWD 361
Query: 216 IKSQNFDCVLFFKVGKFYELFHMDAVIG 243
IKS+N+D ++FFK GKFYEL+ DA +G
Sbjct: 362 IKSKNYDKIVFFKKGKFYELYEDDADLG 389
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 45/118 (38%), Positives = 65/118 (55%), Gaps = 10/118 (8%)
Query: 369 SNHQRVATKKKNVENYVTPEC-RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVAR 426
SN + ATK+ V + E RGT T DG IA L+ +I C+ +FATHY S+A
Sbjct: 1065 SNVLKYATKRSLV---IMDELGRGTSTFDGYSIAFSVLDYISNKINCMCIFATHYQSLAH 1121
Query: 427 RLREEPNVAFEYMS-YIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
+ + +MS Y++D ++FLYKL G+CP S+G V +AGIP +V+
Sbjct: 1122 EPKVAKAIQKSHMSCYVDDVEKK----VIFLYKLTEGVCPASYGMLVGGMAGIPSEVI 1175
Score = 42.7 bits (99), Expect = 0.54, Method: Compositional matrix adjust.
Identities = 27/91 (29%), Positives = 49/91 (53%), Gaps = 5/91 (5%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
FP++ L+ ++F+ + +IP G+ EYDE + IK+IE+E++ +L+ Q
Sbjct: 779 FPNLKTLISSMRSSFE----INVVQLIPSKGLFTEYDECQERIKAIEQELEQHLKDQKKL 834
Query: 339 FGCTVIYSEAQKKQKKYVLEVPSKYASKAKS 369
F I ++ K+ Y LE+P +K K+
Sbjct: 835 FSSNSIAYKSIGKE-IYQLEIPIDVYNKHKA 864
>gi|2980796|emb|CAA18172.1| putative DNA mismatch repair protein [Arabidopsis thaliana]
Length = 1076
Score = 80.5 bits (197), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEP-NVAFEYMSYIEDKRN 447
RGT T+DG IA TL+ L + CL +F THY +A P +V ++SY+ +++
Sbjct: 895 RGTSTHDGVAIAYATLQHLLAEKRCLVLFVTHYPEIAEISNGFPGSVGTYHVSYLTLQKD 954
Query: 448 DGI---DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
G D + +LYKLV G+C +SFGF VA+LA IP ++ ++A ++EA R+
Sbjct: 955 KGSYDHDDVTYLYKLVRGLCSRSFGFKVAQLAQIPPSCIRRAISMAAKLEAEVRARE 1011
>gi|7269404|emb|CAB81364.1| putative DNA mismatch repair protein [Arabidopsis thaliana]
Length = 1076
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEP-NVAFEYMSYIEDKRN 447
RGT T+DG IA TL+ L + CL +F THY +A P +V ++SY+ +++
Sbjct: 895 RGTSTHDGVAIAYATLQHLLAEKRCLVLFVTHYPEIAEISNGFPGSVGTYHVSYLTLQKD 954
Query: 448 DGI---DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
G D + +LYKLV G+C +SFGF VA+LA IP ++ ++A ++EA R+
Sbjct: 955 KGSYDHDDVTYLYKLVRGLCSRSFGFKVAQLAQIPPSCIRRAISMAAKLEAEVRARE 1011
>gi|123479127|ref|XP_001322723.1| MutS domain III family protein [Trichomonas vaginalis G3]
gi|121905574|gb|EAY10500.1| MutS domain III family protein [Trichomonas vaginalis G3]
Length = 1057
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 54/161 (33%), Positives = 76/161 (47%), Gaps = 21/161 (13%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L+ F+ ++ C VF THYH +A + P V M Y N
Sbjct: 896 RGTSTLDGIAIASSVLDFFINKVKCPLVFCTHYHVLAEEFEQFPMVRNASMKYEISNGN- 954
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
+ Y L+ +CP SFG VA++ G+P D+ + VA E RH A
Sbjct: 955 ----LTLAYTLIDKMCPSSFGCRVAKICGLPADLTEEAQKVADDFEDRH----------A 1000
Query: 509 SLVKSGEKVDVEELQKALESVKSFESQTKKDLEDLPGGVAG 549
+L SG V VE +++ + + KK ++DL GGV
Sbjct: 1001 ALRTSGIDVKVETIEERRDII-----DLKKAIDDLTGGVVN 1036
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/148 (27%), Positives = 65/148 (43%), Gaps = 16/148 (10%)
Query: 101 EDPTPSSSEAEVTPMKNGNKRGL-SSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPST 159
E TPS S P K+ R + ++K+ P P P ++ + + S
Sbjct: 98 EQKTPSKSRTRAKPAKSTKSRSIKTTKAAVPFDAP-------PEVNHAQIAREASASVSE 150
Query: 160 SGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQ 219
DW + D +++ P Y+P T+Y+P + TP Q+W IK
Sbjct: 151 EDLPDWLTTKLR--------DKNKKRPDKEGYDPSTVYIPETVKETFTPFQKQFWDIKEN 202
Query: 220 NFDCVLFFKVGKFYELFHMDAVIGADEL 247
NFD ++ + GKFYE+F +DA+ D L
Sbjct: 203 NFDAIVMIRKGKFYEMFSVDAIFARDVL 230
Score = 43.1 bits (100), Expect = 0.40, Method: Compositional matrix adjust.
Identities = 35/149 (23%), Positives = 70/149 (46%), Gaps = 8/149 (5%)
Query: 242 IGADELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSA 301
+GA + C + + T +S LL + P G +++ + + +++ +
Sbjct: 559 LGALKKCCQFFTKIEGTVKSPLLANV------VPPGKGKSLAKQIDDILAELEVEKSIQS 612
Query: 302 GNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPS 361
I K GV K+ D++ +E+ SIE ++ LR GC + S + +K+ +++P
Sbjct: 613 NEFIVKKGVFKDIDDIDEEVSSIEDDLNDILRDIKREVGCKDL-SYVNMQSEKFQVQIPV 671
Query: 362 KYASKAKSNHQRVATKKKNVENYVTPECR 390
KY S + + ++ K+V Y TPE +
Sbjct: 672 KYCSDLPDKYI-LMSQTKSVRRYHTPEIK 699
>gi|30686920|ref|NP_194284.2| DNA mismatch repair protein Msh3 [Arabidopsis thaliana]
gi|12644077|sp|O65607.2|MSH3_ARATH RecName: Full=DNA mismatch repair protein MSH3; Short=AtMSH3;
AltName: Full=MutS protein homolog 3
gi|3319876|emb|CAA07684.1| Msh3 protein [Arabidopsis thaliana]
gi|332659675|gb|AEE85075.1| DNA mismatch repair protein Msh3 [Arabidopsis thaliana]
Length = 1081
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEP-NVAFEYMSYIEDKRN 447
RGT T+DG IA TL+ L + CL +F THY +A P +V ++SY+ +++
Sbjct: 900 RGTSTHDGVAIAYATLQHLLAEKRCLVLFVTHYPEIAEISNGFPGSVGTYHVSYLTLQKD 959
Query: 448 DGI---DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
G D + +LYKLV G+C +SFGF VA+LA IP ++ ++A ++EA R+
Sbjct: 960 KGSYDHDDVTYLYKLVRGLCSRSFGFKVAQLAQIPPSCIRRAISMAAKLEAEVRARE 1016
>gi|310796497|gb|EFQ31958.1| MutS domain V [Glomerella graminicola M1.001]
Length = 1229
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 79/176 (44%), Gaps = 43/176 (24%)
Query: 107 SSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSET---TPSTSGAQ 163
S E++ KR +K+ QP KKP +++P + D E P+TS AQ
Sbjct: 209 SDESDAPSQSKKRKRREQTKAAQPRKKPNVSSPVKEE--QYDDDDIEEAMLDIPNTSTAQ 266
Query: 164 DWSHN------------------------------------HYQFLHPDHILDADRRSPK 187
W ++ Y +L +I+D +++ P
Sbjct: 267 QWRYDPTSVAQAGTRTASKPTARRHTTLKGKEKAHLKEPEDRYPWLA--NIIDINKKPPG 324
Query: 188 HPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
PDY+P T+Y+PP K +P Q+W IK + +D V+FFK GKFYEL+ DA IG
Sbjct: 325 DPDYDPTTVYIPPMAWNKFSPFEKQYWEIKQKLWDTVVFFKKGKFYELYENDATIG 380
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/157 (29%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L +GC+ FATHYHS+A P + M D+
Sbjct: 1076 RGTSSYDGVAVAQAVLHHVATHVGCVGFFATHYHSLAAEFENHPEIRPRRMQIHVDEEQR 1135
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF----- 503
+ FLYKL G+ SFG + A + GI V++ A + E L++
Sbjct: 1136 ---RVTFLYKLEDGVAQGSFGMHCAAMCGISGRVIERAEVAAREWEHTSRLKESLEKAKS 1192
Query: 504 --------IHKFASLVKSGEKV---DVEELQKALESV 529
+ +SL+K GE V VE L +A+E++
Sbjct: 1193 GCYIPLGVLSDVSSLLKGGEDVAKRGVEVLLRAVEAL 1229
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 26/90 (28%), Positives = 47/90 (52%), Gaps = 5/90 (5%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYL-----R 333
P++SE L Y++ AFD K+A IP+ +++++D D I+ I++E+Q L
Sbjct: 775 MPNLSEPLSYWKTAFDRKKARDERIFIPERSIEQDFDNSQDRIEDIKQELQELLGKKQSE 834
Query: 334 TQCAHFGCTVIYSEAQKKQKKYVLEVPSKY 363
+C T I E + + ++VPS +
Sbjct: 835 LKCKKLKFTDIGKEIYQIEAPKAVKVPSNW 864
>gi|119500868|ref|XP_001267191.1| DNA mismatch repair protein Msh6, putative [Neosartorya fischeri
NRRL 181]
gi|119415356|gb|EAW25294.1| DNA mismatch repair protein Msh6, putative [Neosartorya fischeri
NRRL 181]
Length = 1214
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+I D D +P HPDY+P+T+Y+PP K +P Q+W IK + +D V+FFK GKFYEL+
Sbjct: 290 NIRDIDGHAPDHPDYDPRTIYIPPLAWAKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELY 349
Query: 237 HMDAVIG 243
DA IG
Sbjct: 350 ENDATIG 356
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 76/145 (52%), Gaps = 12/145 (8%)
Query: 246 ELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNII 305
E + +K+SG +GE + Q SG PD+S LL+Y++ AFD +A G ++
Sbjct: 728 EYTITLLKDSGSSGEGVI--------GQLISG-MPDLSSLLEYWKTAFDRTKAKENGILV 778
Query: 306 PKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYAS 365
PK GV++++D + I+ + +++ L+ Q G T I K+ Y LEVP K +
Sbjct: 779 PKPGVEEDFDTSQERIEQLHRDLDNLLKRQRRELGSTAICYRDNGKE-IYQLEVPIKVKN 837
Query: 366 KAKSNHQRVATKKKNVENYVTPECR 390
K+ Q ATK+ V+ Y PE R
Sbjct: 838 IPKNWDQMSATKQ--VKRYYFPELR 860
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 55/192 (28%), Positives = 82/192 (42%), Gaps = 27/192 (14%)
Query: 330 TYLRTQC-----AHFGCTVIYSEAQKKQKKYVLEVPSKYASK-----AKSNHQRVATKKK 379
T LR C A GC Y Q + V + S+ + A+S ++ K
Sbjct: 979 TVLRMTCIAVIMAQIGC---YLPCQSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETK 1035
Query: 380 NVENYVTPEC--------RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLRE 430
+ + TP RGT + DG +A+ L IG + FATHYHS+A
Sbjct: 1036 KILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVATHIGAMGFFATHYHSLAAEFDG 1095
Query: 431 EPNVAFEYMS-YIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTV 489
P + + M +++D+ I FLYKL G+ SFG + A + GIP V++
Sbjct: 1096 HPEITPKRMKIHVDDEER----RITFLYKLEDGVAEGSFGMHCASMCGIPNKVIERAEVA 1151
Query: 490 AFQMEARHNLRQ 501
A Q E L++
Sbjct: 1152 AKQWEHTSRLKE 1163
>gi|302811241|ref|XP_002987310.1| hypothetical protein SELMODRAFT_125776 [Selaginella moellendorffii]
gi|300144945|gb|EFJ11625.1| hypothetical protein SELMODRAFT_125776 [Selaginella moellendorffii]
Length = 932
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 74/148 (50%), Gaps = 15/148 (10%)
Query: 103 PTPSSSEAEVTPMKNGNKR---GLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPST 159
P P+S + P+ G KR S ++ +K+ KL + + S
Sbjct: 24 PVPTSDKRLEVPLVPGTKRVRDDFSRETFDESKRKKL------------LEALGDDEGSK 71
Query: 160 SGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQ 219
GA + ++++ P +I D + R+ P ++ +T+++P LKK + Q+WT K
Sbjct: 72 QGAWAEAQAKFEWMQPSNIRDGNGRNHSDPLFDVRTVHIPENVLKKMSASQRQYWTTKCH 131
Query: 220 NFDCVLFFKVGKFYELFHMDAVIGADEL 247
D VLFFKVGKFYEL+ +DA IG EL
Sbjct: 132 YMDIVLFFKVGKFYELYELDAEIGHKEL 159
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA ++ +GC VFATHYH + + P+V+ ++M+ D +
Sbjct: 778 RGTSTFDGYAIAYAVFRHLVEAVGCRLVFATHYHPLTQEFSGHPSVSLQHMACSFDSSSS 837
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
+ FLYKL G S+G VA LAGIP VV
Sbjct: 838 D-RQLAFLYKLRAGASSASYGLQVALLAGIPASVV 871
>gi|302814979|ref|XP_002989172.1| hypothetical protein SELMODRAFT_129323 [Selaginella moellendorffii]
gi|300143072|gb|EFJ09766.1| hypothetical protein SELMODRAFT_129323 [Selaginella moellendorffii]
Length = 932
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 74/148 (50%), Gaps = 15/148 (10%)
Query: 103 PTPSSSEAEVTPMKNGNKR---GLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPST 159
P P+S + P+ G KR S ++ +K+ KL + + S
Sbjct: 24 PVPTSDKRLEVPLVPGTKRVRDDFSRETFDESKRKKL------------LEALGDDEGSK 71
Query: 160 SGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQ 219
GA + ++++ P +I D + R+ P ++ +T+++P LKK + Q+WT K
Sbjct: 72 QGAWAEAQAKFEWMQPSNIRDGNGRNHSDPLFDVRTVHIPENVLKKMSASQRQYWTTKCH 131
Query: 220 NFDCVLFFKVGKFYELFHMDAVIGADEL 247
D VLFFKVGKFYEL+ +DA IG EL
Sbjct: 132 YMDIVLFFKVGKFYELYELDAEIGHKEL 159
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 51/95 (53%), Gaps = 2/95 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA ++ +GC VFATHYH + + P+V+ ++M+ D +
Sbjct: 778 RGTSTFDGYAIAYAVFRHLVEAVGCRLVFATHYHPLTQEFSGHPSVSLQHMACSFDSSSS 837
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
+ FLYKL G S+G VA LAGIP VV
Sbjct: 838 D-RQLAFLYKLRAGASSASYGLQVALLAGIPASVV 871
>gi|168010740|ref|XP_001758062.1| predicted protein [Physcomitrella patens subsp. patens]
gi|162690939|gb|EDQ77304.1| predicted protein [Physcomitrella patens subsp. patens]
Length = 1109
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/99 (46%), Positives = 59/99 (59%), Gaps = 5/99 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEP-NVAFEYMSYIEDKRN 447
RGT T+DG IA TL L +I CLT F THY +A E P NV+ Y+SY+ ++
Sbjct: 913 RGTSTHDGVAIAYATLHHLLKEIRCLTFFVTHYPRIADLKDEFPGNVSPYYVSYLAEELR 972
Query: 448 ---DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
+ I FLYKLVPG+ +SFG +VA LA +PE V
Sbjct: 973 YAEEATQKITFLYKLVPGVASRSFGLHVARLAQLPEVCV 1011
>gi|71020383|ref|XP_760422.1| hypothetical protein UM04275.1 [Ustilago maydis 521]
gi|74700862|sp|Q4P6I8.1|MSH3_USTMA RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|46100091|gb|EAK85324.1| hypothetical protein UM04275.1 [Ustilago maydis 521]
Length = 1154
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 46/125 (36%), Positives = 69/125 (55%), Gaps = 7/125 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGC--LTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT + DG +A LE L +GC TVF THY +A R P++ +M++ + RN
Sbjct: 1012 RGTSSRDGYCLAAGVLEYLLTLGCPPNTVFITHYLQLASMQRRYPHLRNMHMAFTSNSRN 1071
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFI--- 504
+D I +YKL PGI SFG + A LA +P ++ +T++ + A+H R F+
Sbjct: 1072 -LLDPIHLVYKLRPGIA-HSFGIHAAHLARLPLQIIHSASTISSALYAKHTNRSAFLVLK 1129
Query: 505 HKFAS 509
H FA+
Sbjct: 1130 HAFAN 1134
>gi|336110056|gb|AEI16796.1| mutS protein 6 [Oplurus cyclurus]
Length = 343
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 30/53 (56%), Positives = 43/53 (81%)
Query: 201 EFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
++L+ T M +WW +KSQ+FDCV+F+KVGKFYEL+HMDAV+G ++L +MK
Sbjct: 1 DYLRNCTAGMRKWWELKSQHFDCVIFYKVGKFYELYHMDAVVGVNKLGLVFMK 53
>gi|126654495|ref|XP_001388418.1| DNA repair protein [Cryptosporidium parvum Iowa II]
gi|126117123|gb|EAZ51223.1| DNA repair protein [Cryptosporidium parvum Iowa II]
Length = 1242
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG I+ TLE + I C +F+TH H + + V +M K N+
Sbjct: 1093 RGTSTFDGTAISIATLEYISRVIKCRCLFSTHLHLLCDEFSNDTKVLPFHMDL---KLNN 1149
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
+I FLYK + GICPKS+G NVA+LAGIP++VV +A +E+
Sbjct: 1150 ETRSITFLYKFISGICPKSYGMNVAQLAGIPQEVVDNSVALAKDVES 1196
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 7/73 (9%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQ-------TPCMGQWWTIKSQNFDCVLFFKV 229
+I D+ P P Y+P T++VP ++ TP M Q+W +K ++FD +LFFK+
Sbjct: 281 NIRDSKGTRPLDPCYDPSTIWVPSSNSREAKEERMHFTPAMEQYWELKKEHFDKLLFFKM 340
Query: 230 GKFYELFHMDAVI 242
GKFYELF++DA I
Sbjct: 341 GKFYELFYIDAYI 353
>gi|398394217|ref|XP_003850567.1| hypothetical protein MYCGRDRAFT_45599 [Zymoseptoria tritici IPO323]
gi|339470446|gb|EGP85543.1| hypothetical protein MYCGRDRAFT_45599 [Zymoseptoria tritici IPO323]
Length = 1016
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 49/153 (32%), Positives = 77/153 (50%), Gaps = 10/153 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLR-----EEPNVAFEYMSYIE 443
RGT T+DG IA L ++ I C T+F THY S+AR + E +V +M + E
Sbjct: 864 RGTSTHDGVAIAEAVLVDVVERIKCFTLFITHYQSLARAVEKKWGTEGVDVKNVHMRFTE 923
Query: 444 DKRND--GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
D +D G + FLY++ G +S+G NVA LAG+P+ +++ + +ME R+
Sbjct: 924 DGGDDEAGGKNVTFLYEVGEGTAHRSYGLNVARLAGLPKSLLEVAGKRSGEMELEEGRRR 983
Query: 502 L--FIHKFASLVKSGEKVDVEELQKALESVKSF 532
L ++ G EL+K +E V+
Sbjct: 984 LGYLARVLGGVLNEGNGASAGELEKLIEGVEQL 1016
>gi|118498078|ref|YP_899128.1| DNA mismatch repair protein MutS [Francisella novicida U112]
gi|208779512|ref|ZP_03246857.1| DNA mismatch repair protein MutS [Francisella novicida FTG]
gi|189030726|sp|A0Q809.1|MUTS_FRATN RecName: Full=DNA mismatch repair protein MutS
gi|118423984|gb|ABK90374.1| MutS, subunit of MutHLS complex, methyl-directed mismatch repair
protein [Francisella novicida U112]
gi|208744473|gb|EDZ90772.1| DNA mismatch repair protein MutS [Francisella novicida FTG]
Length = 844
Score = 80.1 bits (196), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG +A+ EKF QIG T+FATHY + ++ PNV + E K
Sbjct: 693 RGTSTFDGLALAKACAEKFAQIGAFTLFATHYFELTELAKQYPNVCNIHFEAKEYK---- 748
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
D I F++K V G KS+G VA+LAGI +DV++ + +E + +L
Sbjct: 749 -DNIYFMHKAVTGAAKKSYGIQVAKLAGISQDVLESAKQNLYNLEKKQHL 797
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGES 261
+ TP + Q+ IKSQ D +LF+++G FYELF DA A+ L + GES
Sbjct: 4 ISNHTPMIQQYLKIKSQYQDILLFYRMGDFYELFFDDAKKAAELLDITLTARGKSNGES 62
>gi|321450381|gb|EFX62419.1| putative DNA mismatch repair ATPase Msh3 [Daphnia pulex]
Length = 145
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 47/100 (47%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEP-NVAFEYMSYI-EDKR 446
RGTGT+DG IA L+ + Q C+T+F THY + + E P +VA +M YI E ++
Sbjct: 37 RGTGTHDGSAIAYAALKYLVKQTKCITLFVTHYPVIVQLEDEFPGHVANYHMGYILESEK 96
Query: 447 NDGID----TIVFLYKLVPGICPKSFGFNVAELAGIPEDV 482
D D +VFLY L PG PKSFG NVA LAGIP +
Sbjct: 97 ADNADCDEEALVFLYTLTPGNSPKSFGLNVARLAGIPSSI 136
>gi|392595671|gb|EIW84994.1| DNA mismatch repair protein MSH3 [Coniophora puteana RWD-64-598 SS2]
Length = 1071
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 55/100 (55%), Gaps = 3/100 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFE--YMSYIEDKR 446
RGT T DG IA L+ +Q + C T+F THY VA L + E +M Y+ + R
Sbjct: 943 RGTSTTDGMSIADAVLQHLVQKVRCKTLFITHYPMVAMDLERKFPAEIENLHMGYMAESR 1002
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
DG + FLY+L PGI SFG A LAG+PE V++
Sbjct: 1003 IDGRTEVTFLYRLTPGIATNSFGVECARLAGLPEKVLEVA 1042
>gi|328863363|gb|EGG12463.1| hypothetical protein MELLADRAFT_46541 [Melampsora larici-populina
98AG31]
Length = 915
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 8/157 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L + CL FATHY ++ PN+A +YM K ++
Sbjct: 737 RGTSTFDGHAIAFAVLHRLATHCSCLGFFATHYSALNEDFAHHPNIASKYML---TKVDE 793
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
++FLYKL G+ PKS+G +VA++ GIP+++VK ++ + E + +Q+ HK
Sbjct: 794 ETREVLFLYKLTNGVSPKSYGPHVAKMGGIPDEIVKRAIMISEEFELKSKSKQIENHKIN 853
Query: 509 SLVKSGEKVDVEELQKALES---VKSFESQTKKDLED 542
+ + D+ L K+L + +K+ + Q K D D
Sbjct: 854 K-ISLTLQADISYLIKSLSNLNLLKNDDHQKKMDGND 889
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 22/42 (52%), Positives = 28/42 (66%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL 247
TP Q+W IK ++FD VLFF+ GKF EL+ DA+IG E
Sbjct: 1 MTPFETQFWEIKQRHFDTVLFFQKGKFSELYEGDAMIGHREF 42
>gi|365761545|gb|EHN03191.1| Msh6p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 1247
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 169 HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFK 228
YQ+L + DA RRS P+Y+P+TLY+P K TP Q+W IKS+ +DC++FFK
Sbjct: 281 RYQWLVDER--DAQRRSKNDPEYDPRTLYIPSSAWNKFTPFEKQYWEIKSKMWDCIVFFK 338
Query: 229 VGKFYELFHMDAVIG 243
GKF+EL+ DA++
Sbjct: 339 KGKFFELYEKDALLA 353
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L I L FATHY ++A + P V MS + D +
Sbjct: 1070 RGGSSSDGFAIAEGVLHHVATHIQSLGFFATHYGTLASSFKHHPQVRPLKMSILVD---E 1126
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ FLYK++ G SFG +VA + GI +D++ A +E
Sbjct: 1127 ATRNVTFLYKMLEGQSEGSFGMHVASMCGISKDIIDNAQIAADNLE 1172
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 41/149 (27%), Positives = 75/149 (50%), Gaps = 6/149 (4%)
Query: 279 FPD-MSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCA 337
FP+ + E ++ + NAF+ + A + I+P+ G D E+D+ +D+I+ +E E+ L
Sbjct: 754 FPEELVEGVENWTNAFERQRAINENVIVPQRGFDVEFDKSLDKIQELEGELMKILVRYRK 813
Query: 338 HFGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRGTGTND 396
F C+ I Y ++ K + Y +E+P ++ SN ++A K + Y + E R +
Sbjct: 814 EFKCSNIQYKDSGK--EIYTIEIPVSVTARVPSNWVQMAA-NKTYKRYYSDEVRTLARSM 870
Query: 397 G-CVIARVTLEKFLQIGCLTVFATHYHSV 424
TLE+ L+ F HY+S+
Sbjct: 871 AEAKELHKTLEEDLKNRLCQKFDAHYNSI 899
>gi|385793470|ref|YP_005826446.1| hypothetical protein [Francisella cf. novicida Fx1]
gi|332678795|gb|AEE87924.1| DNA mismatch repair protein MutS [Francisella cf. novicida Fx1]
Length = 844
Score = 79.7 bits (195), Expect = 3e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG +A+ EKF QIG T+FATHY + ++ PNV + E K
Sbjct: 693 RGTSTFDGLALAKACAEKFAQIGAFTLFATHYFELTELAKQYPNVCNIHFEAKEYK---- 748
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
D I F++K V G KS+G VA+LAGI +DV++ + +E + +L
Sbjct: 749 -DNIYFMHKAVTGAAKKSYGIQVAKLAGISQDVLESAKQNLYNLEKKQHL 797
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGES 261
+ TP + Q+ IKSQ D +LF+++G FYELF DA A+ L + GES
Sbjct: 4 ISNHTPMIQQYLKIKSQYQDILLFYRMGDFYELFFDDAKKAAELLDITLTARGKSNGES 62
>gi|240281682|gb|EER45185.1| DNA mismatch repair protein [Ajellomyces capsulatus H143]
Length = 312
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 34/67 (50%), Positives = 46/67 (68%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+I D DR P HPDY+P+T+Y+PP K +P Q+W IK + +D ++FFK GKFYEL+
Sbjct: 13 NITDIDRNPPGHPDYDPRTIYIPPLAWTKFSPFEKQYWEIKQKFWDTIVFFKKGKFYELY 72
Query: 237 HMDAVIG 243
DA IG
Sbjct: 73 ENDATIG 79
>gi|452823051|gb|EME30065.1| DNA mismatch repair protein MutS isoform 1 [Galdieria sulphuraria]
Length = 1033
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 56/104 (53%), Gaps = 7/104 (6%)
Query: 160 SGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQ 219
+G + WS + I D R P DY+P TLY+PPE ++ +P Q+W +K +
Sbjct: 104 TGEEKWSETNRW---ATDIRDEQHRLPTDVDYDPSTLYIPPEAFRQLSPFQKQFWELKRK 160
Query: 220 NFDCVLFFKVGKFYELFHMDAVIGADELACSYMK----ESGCTG 259
++D VLFFK GKFYEL+ DA IG L +Y E C G
Sbjct: 161 HYDIVLFFKKGKFYELYDCDADIGHSVLGLNYTAGGRVEMRCVG 204
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA+ L +IGCL F+THYH++ FE + +++++ D
Sbjct: 909 RGTSTYDGYAIAKAVLNDISTRIGCLCFFSTHYHNLIHEKLPSNIRFFEMQAEVDEEKKD 968
Query: 449 GIDTIVFLYKL--VPGICPKSFGFNVAELAGIPEDVV 483
+ FLY L S G A++A +P +++
Sbjct: 969 ----VTFLYTLKQTSTSFVSSRGVYCAKMANLPGEIL 1001
>gi|194323303|ref|ZP_03057087.1| DNA mismatch repair protein MutS [Francisella novicida FTE]
gi|194322667|gb|EDX20147.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
novicida FTE]
Length = 835
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG +A+ EKF QIG T+FATHY + ++ PNV + E K
Sbjct: 684 RGTSTFDGLALAKACAEKFAQIGAFTLFATHYFELTELAKQYPNVCNIHFEAKEYK---- 739
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
D I F++K V G KS+G VA+LAGI +DV++ + +E + +L
Sbjct: 740 -DNIYFMHKAVTGAAKKSYGIQVAKLAGISQDVLESAKQNLYNLEKKQHL 788
>gi|302890002|ref|XP_003043886.1| predicted protein [Nectria haematococca mpVI 77-13-4]
gi|256724804|gb|EEU38173.1| predicted protein [Nectria haematococca mpVI 77-13-4]
Length = 1201
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 75/273 (27%), Positives = 120/273 (43%), Gaps = 55/273 (20%)
Query: 20 PASSKGKKTSKSPAKSEDDSPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPP 79
P+S + + T K P + +D+ + P RK K V A SD EP G+ P
Sbjct: 96 PSSQENESTVKKPKSTMNDA-LPSSPTRKVKKVVSYAESSDDEPFTF----GASSTRRRP 150
Query: 80 KAE-----VESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKP 134
+A + E + E ++++D S S+ +V+ K KR SSK P K+
Sbjct: 151 RARPSVKDEDDYDEEEVEQAEDTDTMDDFIASDSDEDVSRPK---KRKRSSKPAAPRKRS 207
Query: 135 KLTAP---------------------------STPSTPSF--------PVSDTSETTPST 159
+++P ST S ++ PV +E
Sbjct: 208 NMSSPVPAPDIDIKDSILEDDEMMEDILEGEGSTASQWNYDPKSSEKHPVMKPAERAAKD 267
Query: 160 SGAQDWSH-----NHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWW 214
++ +H Y +L I+D +RR+P +P+Y+ +T+Y+PP KK +P Q+W
Sbjct: 268 PKYKEKAHVKEPEQRYPWLA--KIMDKERRTPDNPEYDKRTIYIPPAAWKKFSPFETQYW 325
Query: 215 TIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL 247
IK +D ++FFK GKFYEL+ DA +G E
Sbjct: 326 EIKQNLWDTIVFFKKGKFYELYENDATVGHQEF 358
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 54/113 (47%), Gaps = 6/113 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT + DG +A+ L IGC+ FATHYHS+A P + M +++D+
Sbjct: 1048 RGTSSYDGVAVAQAVLHHVATHIGCVGFFATHYHSLATEFENHPEIRARRMQIHVDDEER 1107
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR 500
+ FLYKL G+ SFG + A + GI V+ A + E L+
Sbjct: 1108 ----RVTFLYKLEDGVAEGSFGMHCAAMCGISSRVIDRAEVAAKEWEHTSRLK 1156
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 63/112 (56%), Gaps = 6/112 (5%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
P++ E L ++ +AFD ++A +IP+ G+++++DE D I+ I++++ L +
Sbjct: 747 MPNLEEPLSFWRSAFDRRKARDDKLLIPERGIEEDFDESADRIEEIKQQLDELLAEKKKE 806
Query: 339 FGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPEC 389
F C ++ Y + K+ Y LE P + K SN ++++ K+V+ Y P+
Sbjct: 807 FKCKLLNYRDVGKEI--YQLEAPK--SVKVPSNWRQMSA-TKDVKRYYFPQL 853
>gi|149246718|ref|XP_001527784.1| hypothetical protein LELG_00304 [Lodderomyces elongisporus NRRL
YB-4239]
gi|146447738|gb|EDK42126.1| hypothetical protein LELG_00304 [Lodderomyces elongisporus NRRL
YB-4239]
Length = 1320
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 169 HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFK 228
YQ+L +I DA +R+P HP+Y+P+TLY+P K T Q+W IKSQ ++ V+FFK
Sbjct: 350 RYQWLV--NIKDAQKRTPDHPEYDPRTLYIPQLAWSKFTAFEKQYWEIKSQMWNTVVFFK 407
Query: 229 VGKFYELFHMDAVIG 243
GKFYEL+ DA+I
Sbjct: 408 KGKFYELYENDAIIA 422
Score = 57.8 bits (138), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 35/113 (30%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG +A L + + FATH++S+ P V M+ I D+ +
Sbjct: 1127 RGGSSSDGFAVAESVLHHLATHLQSIGFFATHFNSLGLAFETHPQVKPMRMAIIVDQTSR 1186
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLYKL G P SFG NVA + GI +++V A + E L++
Sbjct: 1187 ---ELTFLYKLESGTAPGSFGMNVALMCGISKEIVDNAEVAAREYEKFSKLKR 1236
Score = 38.5 bits (88), Expect = 9.4, Method: Compositional matrix adjust.
Identities = 31/114 (27%), Positives = 58/114 (50%), Gaps = 6/114 (5%)
Query: 279 FPD-MSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCA 337
FP MS + +++AFD EA I+P AG+D+E+D + I +E ++ L+
Sbjct: 824 FPQAMSSHIGEWDDAFDRVEAKQ-NIIVPAAGIDEEFDSSISIINDLEAQLNQQLKEYKR 882
Query: 338 HFGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
+ I Y ++ K+ Y++E+P K A + Q + K V+ + +P+ +
Sbjct: 883 EYRSQEICYRDSGKEV--YLIEMPVKVAKNVPLSWQTMGATSK-VKRFWSPKVK 933
>gi|400602694|gb|EJP70296.1| MutS domain V [Beauveria bassiana ARSEF 2860]
Length = 1095
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA L + + CLT+F THY ++AR + +M + DK D
Sbjct: 954 RGTSTHDGAAIAHAVLHHVVTETRCLTLFITHYQNLARVADGLEGLTNVHMKFKADKGPD 1013
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
G + I FLY++ G+ +S+G NVA LA IP+ V+ + ME+ +R+L
Sbjct: 1014 GDEEITFLYEVGEGVAHRSYGLNVARLAHIPKKVIGVAAEKSNAMESEMRMRRL 1067
>gi|296811026|ref|XP_002845851.1| DNA mismatch repair protein msh6 [Arthroderma otae CBS 113480]
gi|238843239|gb|EEQ32901.1| DNA mismatch repair protein msh6 [Arthroderma otae CBS 113480]
Length = 1216
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 168 NHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFF 227
N Y +L +I+D D+ HPDY+P+TLY+PP K +P Q+W IK + +D ++FF
Sbjct: 280 NRYPWLA--NIMDMDKNPIGHPDYDPRTLYIPPLAWTKFSPFEKQYWEIKQKFWDTIVFF 337
Query: 228 KVGKFYELFHMDAVIG 243
K GKFYEL+ DA IG
Sbjct: 338 KKGKFYELYENDATIG 353
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IG L FATHYHS+A P +A M D D
Sbjct: 1054 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLAAEFEGHPEIAARRMRIHVD---D 1110
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLYKL G+ SFG + A + GIP VV+ A Q E +++
Sbjct: 1111 AERRVTFLYKLEDGVAEGSFGMHCASMCGIPSKVVEGAEVAAKQWEHTSRMKE 1163
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 63/114 (55%), Gaps = 3/114 (2%)
Query: 278 CFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCA 337
PD++ LL+++E AFD +A +G ++P+ G+++E+D + I +E+++Q L
Sbjct: 751 AMPDLNSLLRFWETAFDRPKARESGILVPEEGIEEEFDASKENIDQLEEKLQQVLHRVRK 810
Query: 338 HFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRG 391
C+ I + K+ Y LEVP K + KS Q ATK+ V+ Y PE R
Sbjct: 811 ELKCSTIVFKDNGKE-IYQLEVPIKVKNIPKSWDQMSATKQ--VKRYYFPELRA 861
>gi|254374891|ref|ZP_04990372.1| DNA mismatch repair protein MutS [Francisella novicida GA99-3548]
gi|151572610|gb|EDN38264.1| DNA mismatch repair protein MutS [Francisella novicida GA99-3548]
Length = 855
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG +A+ EKF QIG T+FATHY + ++ PNV + E K
Sbjct: 704 RGTSTFDGLALAKACAEKFAQIGAFTLFATHYFELTELAKQYPNVCNIHFEAKEYK---- 759
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
D I F++K V G KS+G VA+LAGI +DV++ + +E + +L
Sbjct: 760 -DNIYFMHKAVTGAAKKSYGIQVAKLAGISQDVLESAKQNLYNLEKKQHL 808
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGES 261
+ TP + Q+ IKSQ D +LF+++G FYELF DA A+ L + GES
Sbjct: 15 ISNHTPMIQQYLKIKSQYQDILLFYRMGDFYELFFDDAKKAAELLDITLTARGKSNGES 73
>gi|254373430|ref|ZP_04988918.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
novicida GA99-3549]
gi|151571156|gb|EDN36810.1| DNA mismatch repair protein MutS [Francisella novicida GA99-3549]
Length = 855
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG +A+ EKF QIG T+FATHY + ++ PNV + E K
Sbjct: 704 RGTSTFDGLALAKACAEKFAQIGAFTLFATHYFELTELAKQYPNVCNIHFEAKEYK---- 759
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
D I F++K V G KS+G VA+LAGI +DV++ + +E + +L
Sbjct: 760 -DNIYFMHKAVTGAAKKSYGIQVAKLAGISQDVLESAKQNLYNLEKKQHL 808
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGES 261
+ TP + Q+ IKSQ D +LF+++G FYELF DA A+ L + GES
Sbjct: 15 ISNHTPMIQQYLKIKSQYQDILLFYRMGDFYELFFDDAKKAAELLDITLTARGKSNGES 73
>gi|194695094|gb|ACF81631.1| unknown [Zea mays]
Length = 497
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 63/110 (57%), Gaps = 3/110 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA + ++ C +FATHYHS+ + P+V+ ++M+ + R+D
Sbjct: 329 RGTSTFDGYAIAYAVFRHLVERVRCRQLFATHYHSLTKEFASHPHVSLQHMACMFKPRSD 388
Query: 449 GIDT--IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
G + FLY+L G CP+S+G VA +AGIP+ +V+ + M A+
Sbjct: 389 GNGQKELTFLYRLTSGACPESYGLQVAAMAGIPKSIVEKASVAGQVMRAK 438
>gi|320581644|gb|EFW95863.1| hypothetical protein HPODL_2146 [Ogataea parapolymorpha DL-1]
Length = 1638
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/88 (46%), Positives = 56/88 (63%), Gaps = 3/88 (3%)
Query: 156 TPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWT 215
TP + A++ + YQ+L HI DAD RS PDY+P+TLY+P K T Q+W
Sbjct: 252 TPQSKFAKE-NEERYQWLV--HIKDADGRSESDPDYDPRTLYIPKSAWSKFTAFEKQYWE 308
Query: 216 IKSQNFDCVLFFKVGKFYELFHMDAVIG 243
IKS+ +D ++FFK GKF+EL+ DA IG
Sbjct: 309 IKSKMWDSIVFFKKGKFFELYEKDADIG 336
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 34/101 (33%), Positives = 58/101 (57%), Gaps = 3/101 (2%)
Query: 280 PDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHF 339
P++ E + + NAFD + A G ++P+ GV+ E+DE +IK +EKE++ L F
Sbjct: 743 PELPECVSNWSNAFDRELAVKDGILVPELGVEPEFDESNQKIKELEKELERILSQYRREF 802
Query: 340 GCT-VIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKK 379
C + Y ++ K+ Y++EVPSK S+ + Q++A K
Sbjct: 803 KCQEMCYKDSGKEI--YLIEVPSKAISRIPKDWQQMAATSK 841
Score = 55.5 bits (132), Expect = 7e-05, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 47/97 (48%), Gaps = 8/97 (8%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI--EDKR 446
RG ++DG IA L I + FATHY ++ P V M + E+ R
Sbjct: 1050 RGGSSSDGFAIAEAVLHHIATHIQSIGFFATHYATLGNSFINHPRVKPLRMGILVDENSR 1109
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
N I FLYKL G SFG +VA + G+P+++V
Sbjct: 1110 N-----ITFLYKLESGRSSGSFGMHVAAMCGVPKNIV 1141
>gi|254875389|ref|ZP_05248099.1| mutS, DNA mismatch repair protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|385795222|ref|YP_005831628.1| DNA mismatch repair protein [Francisella tularensis subsp.
tularensis NE061598]
gi|421756157|ref|ZP_16193083.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis 80700075]
gi|254841388|gb|EET19824.1| mutS, DNA mismatch repair protein [Francisella tularensis subsp.
tularensis MA00-2987]
gi|282159757|gb|ADA79148.1| DNA mismatch repair protein [Francisella tularensis subsp.
tularensis NE061598]
gi|409085623|gb|EKM85759.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis 80700075]
Length = 846
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG +A+ EKF QIG T+FATHY + ++ PNV + E K
Sbjct: 693 RGTSTFDGLALAKACAEKFAQIGAFTLFATHYFELTELAKQYPNVCNIHFEAKEYK---- 748
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
D I F++K V G KS+G VA+LAGI +DV++ + +E + L
Sbjct: 749 -DNIYFMHKAVTGAAKKSYGIQVAKLAGISQDVLESAKQNLYNLEKKQQL 797
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGES 261
+ TP + Q+ IKSQ D +LF+++G FYELF DA A+ L + GES
Sbjct: 4 ISNHTPMIQQYLKIKSQYQDILLFYRMGDFYELFFDDAKKAAELLDITLTARGKSNGES 62
>gi|66819423|ref|XP_643371.1| hypothetical protein DDB_G0275999 [Dictyostelium discoideum AX4]
gi|60471499|gb|EAL69456.1| hypothetical protein DDB_G0275999 [Dictyostelium discoideum AX4]
Length = 898
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 66/107 (61%), Gaps = 6/107 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIG-CLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA+ +E Q+ C T+FATHYH + + L E P++ ++ ED+
Sbjct: 783 RGTSTLDGISIAQSVVEYLNQVNRCRTLFATHYHELTKNLDETPHIKCYCLAIQEDE--- 839
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
D I+F +K+VPG+ KS+G A++AGIP V++ ++ F++E+
Sbjct: 840 --DEILFTHKIVPGMSNKSYGIFCAKMAGIPNSVLERSKSILFELES 884
>gi|187931226|ref|YP_001891210.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
mediasiatica FSC147]
gi|238691524|sp|B2SEQ6.1|MUTS_FRATM RecName: Full=DNA mismatch repair protein MutS
gi|187712135|gb|ACD30432.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
mediasiatica FSC147]
Length = 844
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG +A+ EKF QIG T+FATHY + ++ PNV + E K
Sbjct: 693 RGTSTFDGLALAKACAEKFAQIGAFTLFATHYFELTELAKQYPNVCNIHFEAKEYK---- 748
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
D I F++K V G KS+G VA+LAGI +DV++ + +E + L
Sbjct: 749 -DNIYFMHKAVTGAAKKSYGIQVAKLAGISQDVLESAKQNLYNLEKKQQL 797
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGES 261
+ TP + Q+ IKSQ D +LF+++G FYELF DA A+ L + GES
Sbjct: 4 ISNHTPMIQQYLKIKSQYQDILLFYRMGDFYELFFDDAKKAAELLDITLTARGKSNGES 62
>gi|379717766|ref|YP_005306102.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis TIGB03]
gi|379726370|ref|YP_005318556.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis TI0902]
gi|377827819|gb|AFB81067.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis TI0902]
gi|377829443|gb|AFB79522.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis TIGB03]
Length = 837
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG +A+ EKF QIG T+FATHY + ++ PNV + E K
Sbjct: 684 RGTSTFDGLALAKACAEKFAQIGAFTLFATHYFELTELAKQYPNVCNIHFEAKEYK---- 739
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
D I F++K V G KS+G VA+LAGI +DV++ + +E + L
Sbjct: 740 -DNIYFMHKAVTGAAKKSYGIQVAKLAGISQDVLESAKQNLYNLEKKQQL 788
>gi|321459752|gb|EFX70802.1| putative MSH3, mismatch repair ATPase [Daphnia pulex]
Length = 1013
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEP-NVAFEYMSYI-EDKR 446
RGTGT+DG IA L+ + Q C+T+F THY + + E P +VA +M YI E ++
Sbjct: 878 RGTGTHDGSAIAYAALKYLVKQTKCITLFVTHYPVIVQLEDEFPGHVANYHMGYILESEK 937
Query: 447 NDGI------DTIVFLYKLVPGICPKSFGFNVAELAGIPEDV 482
D + + +VFLY L PG PKSFG NVA LAGIP +
Sbjct: 938 ADNVQADCDEEALVFLYTLTPGNSPKSFGLNVARLAGIPSSI 979
>gi|134301816|ref|YP_001121784.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis WY96-3418]
gi|421751609|ref|ZP_16188649.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis AS_713]
gi|421753464|ref|ZP_16190456.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis 831]
gi|421757189|ref|ZP_16194072.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis 80700103]
gi|421759048|ref|ZP_16195883.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis 70102010]
gi|424674365|ref|ZP_18111285.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis 70001275]
gi|189030719|sp|A4IXL2.1|MUTS_FRATW RecName: Full=DNA mismatch repair protein MutS
gi|134049593|gb|ABO46664.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis WY96-3418]
gi|409086945|gb|EKM87056.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis 831]
gi|409087141|gb|EKM87248.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis AS_713]
gi|409091309|gb|EKM91310.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis 70102010]
gi|409092836|gb|EKM92802.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis 80700103]
gi|417435039|gb|EKT89967.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis 70001275]
Length = 844
Score = 79.7 bits (195), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG +A+ EKF QIG T+FATHY + ++ PNV + E K
Sbjct: 693 RGTSTFDGLALAKACAEKFAQIGAFTLFATHYFELTELAKQYPNVCNIHFEAKEYK---- 748
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
D I F++K V G KS+G VA+LAGI +DV++ + +E + L
Sbjct: 749 -DNIYFMHKAVTGAAKKSYGIQVAKLAGISQDVLESAKQNLYNLEKKQQL 797
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGES 261
+ TP + Q+ IKSQ D +LF+++G FYELF DA A+ L + GES
Sbjct: 4 ISNHTPMIQQYLKIKSQYQDILLFYRMGDFYELFFDDAKKAAELLDITLTARGKSNGES 62
>gi|121707076|ref|XP_001271724.1| DNA mismatch repair protein Msh6, putative [Aspergillus clavatus
NRRL 1]
gi|119399872|gb|EAW10298.1| DNA mismatch repair protein Msh6, putative [Aspergillus clavatus
NRRL 1]
Length = 1212
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 73/264 (27%), Positives = 113/264 (42%), Gaps = 67/264 (25%)
Query: 16 ESSTPASSKGKKTS--KSPAKSEDDSPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSE 73
++++P+ K+ S +S ++ EDD V P R++++ K ++ EP+D
Sbjct: 121 KTASPSRRAKKQVSYAESESEGEDDDDVIFAPNRRNSRASKKR-KTSPEPED-------- 171
Query: 74 DEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKK 133
E E E ++E ++ + S+ EV P K KR SK+ PT+K
Sbjct: 172 --------EFEQAGEVGYSDDEFDDFI---VADESDEEVQPSK---KRKRPSKA--PTRK 215
Query: 134 PKLTAPSTPSTPSFPVSDTSETTPSTSG--AQDWSHN--------HYQFLHPD------- 176
+ P +P D P G A W+++ H P
Sbjct: 216 SSIPVPPSPG------EDLDLDIPDAVGGTAVKWTYDPENQEPRQHRTIQAPSKSSATPA 269
Query: 177 -----------------HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQ 219
+I D D P HPDY+P+T+Y+PP K +P Q+W IK +
Sbjct: 270 KQKAHLKEPEDRYPWLANIRDMDGHPPNHPDYDPRTIYIPPLAWSKFSPFEKQYWEIKQK 329
Query: 220 NFDCVLFFKVGKFYELFHMDAVIG 243
+D V+FFK GKFYEL+ DA IG
Sbjct: 330 FWDTVVFFKKGKFYELYENDATIG 353
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 12/145 (8%)
Query: 246 ELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNII 305
E S +K++G +GE ++ QL N PD+ LL+Y++ AFD +A G ++
Sbjct: 725 EYTISLLKDTGSSGEG-VIGQLIN--------AMPDLGSLLEYWKTAFDRNKAKENGILV 775
Query: 306 PKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYAS 365
PK GV++++D + I+ + +++ L+ G T I K+ Y LEVP K +
Sbjct: 776 PKLGVEEDFDNSQESIEQLHRDLDNLLKRVRRELGSTAICYRDNGKE-IYQLEVPVKVKN 834
Query: 366 KAKSNHQRVATKKKNVENYVTPECR 390
K+ Q ATK+ V+ Y PE R
Sbjct: 835 VPKNWDQMSATKQ--VKRYYFPELR 857
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT + DG +A+ L IG + FATHYHS+A P + + M +++D+
Sbjct: 1051 RGTSSYDGVAVAQAVLHHISSHIGAMGFFATHYHSLAAEFEGHPEITPKRMRIHVDDQER 1110
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
I FLYKL G+ SFG + A + GIP +++ A Q E L++
Sbjct: 1111 ----RITFLYKLEDGVAEGSFGMHCASMCGIPNKIIERAEVAAKQWEHTSRLKE 1160
>gi|254369003|ref|ZP_04985016.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
holarctica FSC022]
gi|157121924|gb|EDO66094.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
holarctica FSC022]
Length = 855
Score = 79.3 bits (194), Expect = 4e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG +A+ EKF QIG T+FATHY + ++ PNV + E K
Sbjct: 704 RGTSTFDGLALAKACAEKFAQIGAFTLFATHYFELTELAKQYPNVCNIHFEAKEYK---- 759
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
D I F++K V G KS+G VA+LAGI +DV++ + +E + L
Sbjct: 760 -DNIYFMHKAVTGAAKKSYGIQVAKLAGISQDVLESAKQNLYNLEKKQQL 808
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGES 261
+ TP + Q+ IKSQ D +LF+++G FYELF DA A+ L + GES
Sbjct: 15 ISNHTPMIQQYLKIKSQYQDILLFYRMGDFYELFFDDAKKAAELLDITLTARGKSNGES 73
>gi|402467936|gb|EJW03155.1| hypothetical protein EDEG_02460 [Edhazardia aedis USNM 41457]
Length = 1532
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 36/76 (47%), Positives = 50/76 (65%), Gaps = 2/76 (2%)
Query: 169 HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFK 228
+ FL+P ILDA++ S +Y+P TL++ PE K T Q+W+IK + FD V+FFK
Sbjct: 273 RFNFLNP--ILDANKNSVNSKNYDPTTLFISPEDFNKLTDFEKQFWSIKKEYFDTVIFFK 330
Query: 229 VGKFYELFHMDAVIGA 244
GKFYEL+ DA IG+
Sbjct: 331 KGKFYELYENDADIGS 346
>gi|321450379|gb|EFX62417.1| hypothetical protein DAPPUDRAFT_336969 [Daphnia pulex]
Length = 633
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 46/102 (45%), Positives = 61/102 (59%), Gaps = 9/102 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEP-NVAFEYMSYI-EDKR 446
RGTGT+DG IA L+ + Q C+T+F THY + + E P +VA +M YI E ++
Sbjct: 498 RGTGTHDGSAIAYAALKYLVKQTKCITLFVTHYPVIVQLEDEFPGHVANYHMGYILESEK 557
Query: 447 NDGI------DTIVFLYKLVPGICPKSFGFNVAELAGIPEDV 482
D + + +VFLY L PG PKSFG NVA LAGIP +
Sbjct: 558 ADNVQADCDEEALVFLYTLTPGNSPKSFGLNVARLAGIPSSI 599
>gi|449514801|ref|XP_002190416.2| PREDICTED: DNA mismatch repair protein Msh3 [Taeniopygia guttata]
Length = 963
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 80/146 (54%), Gaps = 14/146 (9%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEY-MSYIEDKRN 447
RGT T+DG IA TLE F++ + LT+F THY SV + P+ Y M+++ + +
Sbjct: 806 RGTSTHDGIAIAYATLEHFIRDVQALTLFVTHYPSVCELQQRYPHAVGNYHMAFLLSEED 865
Query: 448 DGIDT---------IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
G T I FLY++ G+ +S+G NVA+LA IPE+++K + ++E N
Sbjct: 866 AGQHTGQLEENPEFITFLYQITKGVSARSYGLNVAKLADIPEEILKNAAHKSKELERIVN 925
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQK 524
+++ K S ++ D +ELQK
Sbjct: 926 MKR---RKMKSFAEAWNINDSQELQK 948
>gi|67611475|ref|XP_667158.1| DNA repair protein [Cryptosporidium hominis TU502]
gi|54658270|gb|EAL36933.1| DNA repair protein [Cryptosporidium hominis]
Length = 1242
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 61/107 (57%), Gaps = 4/107 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG I+ TLE + I C +F+TH H + + V +M K N+
Sbjct: 1093 RGTSTFDGTAISIATLEYISRVIKCRCLFSTHLHLLCDEFSNDTKVLPFHMDL---KLNN 1149
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
+I FLYK + GICPKS+G NVA+LAGIP++V+ +A +E+
Sbjct: 1150 ETRSITFLYKFISGICPKSYGMNVAQLAGIPQEVIDNSVALAKDVES 1196
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 31/73 (42%), Positives = 46/73 (63%), Gaps = 7/73 (9%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQ-------TPCMGQWWTIKSQNFDCVLFFKV 229
+I D+ P P Y+P T++VP ++ TP M Q+W +K ++FD +LFFK+
Sbjct: 281 NIRDSKGTRPLDPCYDPSTIWVPSSNSREAKEERMHFTPAMEQYWELKKEHFDKLLFFKM 340
Query: 230 GKFYELFHMDAVI 242
GKFYELF++DA I
Sbjct: 341 GKFYELFYIDAYI 353
>gi|56708538|ref|YP_170434.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110671009|ref|YP_667566.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis FSC198]
gi|254371164|ref|ZP_04987166.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis FSC033]
gi|81677019|sp|Q5NEV8.1|MUTS_FRATT RecName: Full=DNA mismatch repair protein MutS
gi|123359378|sp|Q14GB1.1|MUTS_FRAT1 RecName: Full=DNA mismatch repair protein MutS
gi|56605030|emb|CAG46132.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis SCHU S4]
gi|110321342|emb|CAL09515.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis FSC198]
gi|151569404|gb|EDN35058.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
tularensis FSC033]
Length = 857
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG +A+ EKF QIG T+FATHY + ++ PNV + E K
Sbjct: 704 RGTSTFDGLALAKACAEKFAQIGAFTLFATHYFELTELAKQYPNVCNIHFEAKEYK---- 759
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
D I F++K V G KS+G VA+LAGI +DV++ + +E + L
Sbjct: 760 -DNIYFMHKAVTGAAKKSYGIQVAKLAGISQDVLESAKQNLYNLEKKQQL 808
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGES 261
+ TP + Q+ IKSQ D +LF+++G FYELF DA A+ L + GES
Sbjct: 15 ISNHTPMIQQYLKIKSQYQDILLFYRMGDFYELFFDDAKKAAELLDITLTARGKSNGES 73
>gi|156743470|ref|YP_001433599.1| DNA mismatch repair protein MutS [Roseiflexus castenholzii DSM 13941]
gi|189083187|sp|A7NPT5.1|MUTS_ROSCS RecName: Full=DNA mismatch repair protein MutS
gi|156234798|gb|ABU59581.1| DNA mismatch repair protein MutS [Roseiflexus castenholzii DSM 13941]
Length = 1088
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 44/110 (40%), Positives = 65/110 (59%), Gaps = 8/110 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL---QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG IA+ +E ++GC T+FATHYH + R P + +M+ E
Sbjct: 899 RGTSTYDGMAIAQAVIEYIHNEPRLGCRTLFATHYHELTDLERTLPRLKNYHMAATE--- 955
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
DG +VFL++L PG +S+G +VAELAGIP+ V++ T + ++E R
Sbjct: 956 QDG--RVVFLHELRPGGADRSYGIHVAELAGIPQPVIRRATELLAELERR 1003
>gi|62321343|dbj|BAD94621.1| putative DNA mismatch repair protein [Arabidopsis thaliana]
Length = 386
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 69/117 (58%), Gaps = 5/117 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEP-NVAFEYMSYIEDKRN 447
RGT T+DG IA TL+ L + CL +F THY +A P +V ++SY+ +++
Sbjct: 205 RGTSTHDGVAIAYATLQHLLAEKRCLVLFVTHYPEIAEISNGFPGSVGTYHVSYLTLQKD 264
Query: 448 DGI---DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
G D + +LYKLV G+C +SFGF VA+LA IP ++ ++A ++EA R+
Sbjct: 265 KGSYDHDDVTYLYKLVRGLCSRSFGFKVAQLAQIPPSCIRRAISMAAKLEAEVRARE 321
>gi|336273106|ref|XP_003351308.1| MSH6 protein [Sordaria macrospora k-hell]
gi|380092828|emb|CCC09581.1| putative MSH6 protein [Sordaria macrospora k-hell]
Length = 1230
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 59/107 (55%), Gaps = 13/107 (12%)
Query: 137 TAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTL 196
TAP++ S + P + T E Y +L I DA+R P HPDY+P ++
Sbjct: 287 TAPTSSSAKTKPKAHTRE-----------PEQRYPWLA--DIQDANRNRPGHPDYDPGSV 333
Query: 197 YVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
YVPP ++ +P Q+W IK +D V+FFK GKFYEL+ DA IG
Sbjct: 334 YVPPSAWRQFSPFETQYWEIKKNLWDTVVFFKKGKFYELYENDATIG 380
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/191 (29%), Positives = 82/191 (42%), Gaps = 25/191 (13%)
Query: 330 TYLRTQC-----AHFGCTVIYSEAQKKQKKYVLEVPSKYASK-----AKSNHQRVATKKK 379
T LR C A GC Y A + V + S+ + A+S ++ K
Sbjct: 998 TILRMSCIAVIMAQIGC---YVPAMSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETK 1054
Query: 380 NVENYVTPEC--------RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLRE 430
+ + TP RGT + DG +A+ L IGC+ FATHYHS+A
Sbjct: 1055 KILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVASHIGCVGFFATHYHSLATEFEN 1114
Query: 431 EPNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
P + + M D+ N I FLYKL G+ SFG + A + GIP+ V++ A
Sbjct: 1115 HPEIRAKRMQIEVDEENK---RITFLYKLEDGVAEGSFGMHCAAMCGIPDKVIRRSEVAA 1171
Query: 491 FQMEARHNLRQ 501
+ E L++
Sbjct: 1172 KEWEHTSRLKE 1182
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 26/83 (31%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
P++ E L Y++ AFD K A +IP+ G+ +++D +E+ I+ E+Q L Q
Sbjct: 772 MPNLKEPLGYWKTAFDRKRARDDKLLIPEQGIVEDFDRSQEELDRIKGELQELLERQKTA 831
Query: 339 FGC-TVIYSEAQKKQKKYVLEVP 360
C T +++ K+ Y +EVP
Sbjct: 832 LRCKTAKFTDVGKEV--YQIEVP 852
>gi|134058585|emb|CAK44621.1| unnamed protein product [Aspergillus niger]
Length = 1193
Score = 79.3 bits (194), Expect = 5e-12, Method: Compositional matrix adjust.
Identities = 71/234 (30%), Positives = 109/234 (46%), Gaps = 7/234 (2%)
Query: 14 DSESSTPASSKGKKTSKSPAKSEDDSPVTKRPRRKSA-KRVKSAIQSDSEPDDMLQDNGS 72
D + + K +S ++ EDD RP R S KR K + +SD E +D S
Sbjct: 104 DEQEDNAQAKKQVNYVESDSEGEDDDEKIFRPGRNSRNKRRKMSPESDDEFNDGGDVGYS 163
Query: 73 EDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTK 132
+DE +S+ E ++ S + + SSS V+ ++ + + +G K
Sbjct: 164 DDEMDDFIVADDSDEEAKPSKKRKRPSTQPKSKSSSLPPVSFEEDLDMDIPDASAGTALK 223
Query: 133 ---KPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHP 189
P+ + P P T +S TT + + Y +L +I D D HP
Sbjct: 224 WTYDPESSEPRQPRTTPVTPKKSSGTTKQKAHVTE-PEQRYAWLA--NIRDIDGHPIGHP 280
Query: 190 DYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
+Y+P+TLY+PP K +P Q+W IK + +D V+FFK GKFYEL+ DA IG
Sbjct: 281 EYDPRTLYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIG 334
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/146 (33%), Positives = 79/146 (54%), Gaps = 14/146 (9%)
Query: 246 ELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNII 305
E S +KESG GE + Q SG PD++ELL+Y++ AFD +A ++
Sbjct: 706 EYTMSLLKESGSAGEGVI--------GQLISG-MPDLNELLEYWKTAFDRSKARENSILV 756
Query: 306 PKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCT-VIYSEAQKKQKKYVLEVPSKYA 364
PK GV++++D + I+ I +++++ L+ G + +IY + K + Y LEVP K
Sbjct: 757 PKPGVEEDFDSSQENIEQIHRDLESLLKRVRKELGSSAIIYKDNGK--EIYQLEVPIKVK 814
Query: 365 SKAKSNHQRVATKKKNVENYVTPECR 390
+ K+ Q ATK+ V+ Y PE R
Sbjct: 815 NIPKNWDQMSATKQ--VKRYYFPELR 838
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT + DG +A+ L IG L FATHYHS+A P +A + M +++D+
Sbjct: 1032 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLAAEFEGHPEIAPKRMRIHVDDEER 1091
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ-LFIHK 506
+ FLYKL G+ SFG + A + GIP+ V++ A Q E L++ L K
Sbjct: 1092 ----RVTFLYKLEDGVAEGSFGMHCAAMCGIPDKVIERAEVAAKQWEHTSRLKESLERRK 1147
Query: 507 FASLVKSGEKVDV 519
LV G D+
Sbjct: 1148 GGGLVGMGWWSDI 1160
>gi|195397830|ref|XP_002057531.1| GJ18185 [Drosophila virilis]
gi|194141185|gb|EDW57604.1| GJ18185 [Drosophila virilis]
Length = 918
Score = 79.3 bits (194), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 57/177 (32%), Positives = 85/177 (48%), Gaps = 18/177 (10%)
Query: 373 RVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREE 431
R AT+K V + RGT T +GC IA E Q C T+FATH+H + +
Sbjct: 736 RTATEKSLV--IIDELGRGTSTYEGCGIAWSIAEHLAKQTKCFTLFATHFHEITKLAETL 793
Query: 432 PNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAF 491
P V +M+ + D+ D LY++ PG+ KSFG VA LA PE VV+ V
Sbjct: 794 PTVKNVHMAAVADE-----DNFTLLYQVRPGVMEKSFGIQVARLANFPEHVVQNAQEVYN 848
Query: 492 QMEARHNLRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQTKKDLEDLPGGVA 548
+ E H +Q +K ++++Q A+E + + + T ++EDL VA
Sbjct: 849 EFEDEHAGKQ----------SEADKALLDKIQVAIEQLSTAGNNTDINVEDLTQLVA 895
>gi|405123082|gb|AFR97847.1| DNA mismatch repair protein Msh3 [Cryptococcus neoformans var. grubii
H99]
Length = 1169
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 47/115 (40%), Positives = 67/115 (58%), Gaps = 4/115 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRL-REEPN-VAFEYMSYIEDKRN 447
RGT T DG IA TL +IGC T+F THY +VA+ L RE+P+ ++ +MS+ E K
Sbjct: 1011 RGTSTYDGVAIAYATLSHIAEIGCNTLFVTHYPTVAQDLAREKPDKISNWHMSFDEIKMP 1070
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGT--TVAFQMEARHNLR 500
DG I FLY+L G+ SFG A LAG+P+ ++ + + + E + LR
Sbjct: 1071 DGGAEITFLYQLTRGLQEASFGVWCARLAGLPKPILDIAQMRSSSLKAETQERLR 1125
>gi|68467217|ref|XP_722270.1| hypothetical protein CaO19.12411 [Candida albicans SC5314]
gi|68467446|ref|XP_722156.1| hypothetical protein CaO19.4945 [Candida albicans SC5314]
gi|46444105|gb|EAL03382.1| hypothetical protein CaO19.4945 [Candida albicans SC5314]
gi|46444229|gb|EAL03505.1| hypothetical protein CaO19.12411 [Candida albicans SC5314]
Length = 1214
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 42/104 (40%), Positives = 60/104 (57%), Gaps = 2/104 (1%)
Query: 140 STPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVP 199
S+ +TP + TPS + + YQ+L I DA++R HPDY+P+TLY+P
Sbjct: 251 SSVATPKPKSTTIKSLTPSKKSFEKENEERYQWLVD--IRDAEKRPIDHPDYDPRTLYIP 308
Query: 200 PEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
K T Q+W IKS+ ++ V+FF+ GKFYEL+ DAVI
Sbjct: 309 QSAWSKFTAFEKQYWQIKSKMWNTVVFFQKGKFYELYENDAVIA 352
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L + L FATHY ++ + P + M + D
Sbjct: 1050 RGGSSSDGFAIAESVLHHLATHVQSLGFFATHYGTLGLSFKTHPQIKQLRMGIVVDS--- 1106
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
G I FLYKL G PKSFG NVA + GIP+ +V A E L++L
Sbjct: 1107 GSRNITFLYKLETGTAPKSFGMNVASMCGIPDAIVDNAEIAAKAYEQTSKLKKL 1160
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 17/141 (12%)
Query: 257 CTGESTLLTQLCNYESQTPSG---CFP-DMSELLKYFENAFDHKEASSAGNIIPKAGVDK 312
G S+ L N ES FP +M EL++ +E+AFD ++A + I+P AG D+
Sbjct: 725 IAGVSSKLVDFTNVESGMLYKYLKSFPHEMRELIQQWEDAFDREQAKN-DIIVPSAGTDE 783
Query: 313 EYDE---VMDEIKS-IEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAK 368
E+D M+++K+ ++K ++ Y RT + C Y ++ K + Y++EVP K K
Sbjct: 784 EFDNSQASMEDLKTQLDKLLKEYKRTYKSQEIC---YRDSGK--EIYLIEVPFKL--KVP 836
Query: 369 SNHQRVATKKKNVENYVTPEC 389
+ +++ + K V+ Y +PE
Sbjct: 837 GDWKQMGSTSK-VKRYYSPEV 856
>gi|350287714|gb|EGZ68950.1| DNA mismatch repair protein msh6 [Neurospora tetrasperma FGSC 2509]
Length = 1243
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 61/115 (53%), Gaps = 10/115 (8%)
Query: 129 QPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKH 188
+PT+ P+ P + TPS T P Y +L I DA+R P H
Sbjct: 289 EPTE-PRSATPRSAQTPS-------ATKPKPKAHTREPEERYPWLA--DIQDANRNRPGH 338
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
PDY+P ++YVPP ++ +P Q+W IK +D V+FFK GKFYEL+ DA IG
Sbjct: 339 PDYDPGSVYVPPSAWRQFSPFETQYWEIKKNLWDTVVFFKKGKFYELYENDATIG 393
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IGC+ FATHYHS+A P + M D+ N
Sbjct: 1086 RGTSSYDGVAVAQAVLHHVASHIGCVGFFATHYHSLATEFENHPEIRARRMQIAVDEENK 1145
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
I FLYKL G+ SFG + A + GIP+ V++ A + E L++
Sbjct: 1146 ---RITFLYKLEDGVAEGSFGMHCAAMCGIPDKVIRRSEVAAKEWEHTSRLKE 1195
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD+ E L Y++ AFD K A +IP+ G+++++D E+ I+ E+Q L Q
Sbjct: 785 MPDLKEPLGYWKTAFDRKRARDDKLLIPEPGIEEDFDRSQAELDRIKGELQELLERQKTA 844
Query: 339 FGC-TVIYSEAQKKQKKYVLEVP 360
C T +++ K+ Y +EVP
Sbjct: 845 LRCKTAKFTDVGKEV--YQIEVP 865
>gi|336467632|gb|EGO55796.1| DNA mismatch repair protein msh6 [Neurospora tetrasperma FGSC 2508]
Length = 1235
Score = 79.0 bits (193), Expect = 6e-12, Method: Compositional matrix adjust.
Identities = 45/115 (39%), Positives = 61/115 (53%), Gaps = 10/115 (8%)
Query: 129 QPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKH 188
+PT+ P+ P + TPS T P Y +L I DA+R P H
Sbjct: 281 EPTE-PRSATPRSAQTPS-------ATKPKPKAHTREPEERYPWLA--DIQDANRNRPGH 330
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
PDY+P ++YVPP ++ +P Q+W IK +D V+FFK GKFYEL+ DA IG
Sbjct: 331 PDYDPGSVYVPPSAWRQFSPFETQYWEIKKNLWDTVVFFKKGKFYELYENDATIG 385
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IGC+ FATHYHS+A P + M D+ N
Sbjct: 1078 RGTSSYDGVAVAQAVLHHVASHIGCVGFFATHYHSLATEFENHPEIRARRMQIAVDEENK 1137
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
I FLYKL G+ SFG + A + GIP+ V++ A + E L++
Sbjct: 1138 ---RITFLYKLEDGVAEGSFGMHCAAMCGIPDKVIRRSEVAAKEWEHTSRLKE 1187
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 45/83 (54%), Gaps = 3/83 (3%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD+ E L Y++ AFD K A +IP+ G+++++D E+ I+ E+Q L Q
Sbjct: 777 MPDLKEPLGYWKTAFDRKRARDDKLLIPEPGIEEDFDRSQAELDRIKGELQELLERQKTA 836
Query: 339 FGC-TVIYSEAQKKQKKYVLEVP 360
C T +++ K+ Y +EVP
Sbjct: 837 LRCKTAKFTDVGKEV--YQIEVP 857
>gi|358390700|gb|EHK40105.1| hypothetical protein TRIATDRAFT_252385 [Trichoderma atroviride IMI
206040]
Length = 1184
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%)
Query: 178 ILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFH 237
I D D+R P PDY+P+TL++PP K +P Q+W IK +D ++FFK GKFYEL+
Sbjct: 272 IRDKDKRLPDDPDYDPRTLFIPPGAWNKFSPFEKQYWEIKQNLWDTIVFFKKGKFYELYE 331
Query: 238 MDAVIGADEL 247
DA IG E
Sbjct: 332 KDATIGHQEF 341
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 71/158 (44%), Gaps = 19/158 (12%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT + DG +A+ L IGC+ FATHYHS+A P + M +++D+
Sbjct: 1031 RGTSSYDGVAVAQAVLHHVATHIGCIGFFATHYHSLATEFENHPEIRARRMQIHVDDEER 1090
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF---- 503
I FLYKL G+ SFG + A + GI + V+K A + E L+
Sbjct: 1091 ----RITFLYKLEDGVAEGSFGMHCAAMCGISDRVIKRAEVAAKEWEHTSRLKDSLDKAK 1146
Query: 504 ---------IHKFASLVKSGEKVDVEELQKALESVKSF 532
+ SL+ + V VE + L++++S
Sbjct: 1147 TGCYIPLGILSDIGSLLGNKGDVGVEGVDVLLKAIESL 1184
Score = 41.6 bits (96), Expect = 1.1, Method: Compositional matrix adjust.
Identities = 30/112 (26%), Positives = 56/112 (50%), Gaps = 6/112 (5%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
P++ E L Y+ AF+ + +IP++G+D+++D I+ I+ ++ L +
Sbjct: 730 MPNLEEPLAYWSTAFNRQRVKEEKLMIPESGIDEDFDASAARIQEIKDQLNDLLIEKKGE 789
Query: 339 FGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPEC 389
C T+ Y++ K + Y +E P K A S Q AT K+V+ + P+
Sbjct: 790 LKCKTLKYTDVGK--EIYQIEAP-KAAKIPSSWRQMSAT--KDVKRWYFPQL 836
>gi|299753991|ref|XP_001833680.2| DNA mismatch repair protein MSH3 [Coprinopsis cinerea okayama7#130]
gi|298410557|gb|EAU88225.2| DNA mismatch repair protein MSH3 [Coprinopsis cinerea okayama7#130]
Length = 1096
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 49/142 (34%), Positives = 77/142 (54%), Gaps = 11/142 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIG-CLTVFATHYHSVARRLREEPNVAFE--YMSYIEDKR 446
RGT T DG IA TL ++ C T+F THY VA RL++ E +M+Y +
Sbjct: 934 RGTSTFDGMAIADATLHYLVEAKRCKTLFITHYPMVATRLQKRFPSDLENLHMAYSTSVQ 993
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME-------ARHNL 499
DG TI FLY L G+ P+SFG LAG+PE++++ + + Q++ AR+ +
Sbjct: 994 IDGTRTITFLYNLTSGLAPESFGIECGRLAGLPENLLRIASQRSDQLQKEVQKRIARNRI 1053
Query: 500 RQ-LFIHKFASLVKSGEKVDVE 520
R+ L + + S + G + D++
Sbjct: 1054 RKALQLMRQLSRSEGGLETDIK 1075
>gi|255718761|ref|XP_002555661.1| KLTH0G14476p [Lachancea thermotolerans]
gi|238937045|emb|CAR25224.1| KLTH0G14476p [Lachancea thermotolerans CBS 6340]
Length = 1276
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 50/127 (39%), Positives = 68/127 (53%), Gaps = 19/127 (14%)
Query: 132 KKPKLTAPSTPSTPSFPVSDTSET---------TPSTSGAQDWS------HNHYQFLHPD 176
KKPK A + P T PV+ S T PS +G S YQ+L
Sbjct: 262 KKPK--ARAGPVTSGSPVAVRSPTHRKRSPPARAPSQTGKGKHSGFNKENEERYQWLV-- 317
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
H DA RS + PDY+ +TL++P K TP Q+W IKS+ +DC++FFK GKF+EL+
Sbjct: 318 HERDAQGRSKEDPDYDSRTLFIPSSAWSKFTPFEKQYWEIKSRMWDCIVFFKKGKFFELY 377
Query: 237 HMDAVIG 243
DA++G
Sbjct: 378 EKDALLG 384
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 48/95 (50%), Gaps = 4/95 (4%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L I L FATHY + + P V M+ + D+++
Sbjct: 1101 RGGSSSDGFAIAESVLHHVATHIQSLGFFATHYGGLGLGFKHHPKVKPLKMNIMVDEKSR 1160
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
I FLYKLV G SFG +VA + GI +++V
Sbjct: 1161 ---EITFLYKLVEGQSEGSFGMHVASMCGIAKEIV 1192
Score = 55.8 bits (133), Expect = 5e-05, Method: Compositional matrix adjust.
Identities = 39/130 (30%), Positives = 66/130 (50%), Gaps = 7/130 (5%)
Query: 263 LLTQLCNYESQTPSGCFPD-----MSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEV 317
L+ +L N+E F + +SE ++ + AFD K+A + G IIP+ GV+ E+D
Sbjct: 765 LIAKLQNFELTGSLQVFLNQIPEALSEKVEGWVGAFDRKKAVNDGVIIPERGVEPEFDRS 824
Query: 318 MDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATK 377
+ IK +E E+ +LR F C+ I + K+ Y +EVP + S+ ++
Sbjct: 825 LQGIKDLEDELDGHLREYKKQFKCSNIQFKDSGKE-IYTIEVPMSATKQIPSDWIQMGAN 883
Query: 378 KKNVENYVTP 387
K N + Y +P
Sbjct: 884 KSN-KRYYSP 892
>gi|340520005|gb|EGR50242.1| DNA mismatch repair protein [Trichoderma reesei QM6a]
Length = 1095
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 43/114 (37%), Positives = 63/114 (55%), Gaps = 1/114 (0%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA+ L + + CLT+F THY ++A P V +M + +K D
Sbjct: 954 RGTSTHDGAAIAQAVLHHVVTETRCLTLFITHYQNLAHIADGLPGVTNVHMKFNAEKGPD 1013
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
G + I FLY++ GI +S+G NVA LA IP+ V+ + Q+E R+L
Sbjct: 1014 GEEEITFLYEVGEGIAHRSYGLNVARLARIPKKVLDVAAEKSRQLENEMRRRRL 1067
>gi|302502899|ref|XP_003013410.1| hypothetical protein ARB_00228 [Arthroderma benhamiae CBS 112371]
gi|291176974|gb|EFE32770.1| hypothetical protein ARB_00228 [Arthroderma benhamiae CBS 112371]
Length = 1217
Score = 79.0 bits (193), Expect = 7e-12, Method: Compositional matrix adjust.
Identities = 72/242 (29%), Positives = 109/242 (45%), Gaps = 22/242 (9%)
Query: 17 SSTPASSKGKKTSKSPAKSEDD---SPVTKRPRRKSAKRVKSA-IQSDSE------PDDM 66
+S +S + + KS +SED+ P + R +S KR ++ + SD E DD
Sbjct: 120 TSNTSSRRARTAVKSYEESEDEDVVQPGRRNARGRSQKRRRTGDLSSDEECFKPDEDDDE 179
Query: 67 LQDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSK 126
+ D++V P E E E + S + ++ PS E+ P G+ L
Sbjct: 180 DKYIDDTDDFVVPDDESEEELKSSRKRKRPSKA-----PSKKESSSPPPIPGDDMDLEIP 234
Query: 127 SGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSH-----NHYQFLHPDHILDA 181
K P P + +S Q +H N Y +L +I+D
Sbjct: 235 QCTSASTQKWRYDPDNVEPYQPRKALVKPETHSSSKQKKAHMTEPENRYPWLA--NIMDM 292
Query: 182 DRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAV 241
D+ HPDY+P+TLY+PP K +P Q+W IK + +D ++FFK GKFYEL+ DA
Sbjct: 293 DKNPLGHPDYDPRTLYIPPLAWTKFSPFEKQYWEIKQKFWDTIVFFKKGKFYELYENDAT 352
Query: 242 IG 243
IG
Sbjct: 353 IG 354
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IG L FATHYHS+A P +A M D D
Sbjct: 1055 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLAAEFEGHPEIAARRMRIHVD---D 1111
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLYKL G+ SFG + A + GIP VV+ A Q E +++
Sbjct: 1112 AERRVTFLYKLEDGVAEGSFGMHCASMCGIPSKVVEGAEVAAKQWEHTSRMKE 1164
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 46/146 (31%), Positives = 75/146 (51%), Gaps = 13/146 (8%)
Query: 246 ELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNII 305
E +KE+G +G L+ QL + PD++ LLK++E AFD +A + ++
Sbjct: 730 EYTMGLLKEAG-SGHG-LIGQLIS--------AMPDLNGLLKFWETAFDRAKARESDILV 779
Query: 306 PKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYAS 365
P+ G+++E+D I+ +E E++ L+ C+ I + K+ Y LEVP K +
Sbjct: 780 PEEGIEEEFDASKKNIEQLEDELEQVLQRTRKELKCSTIVFKDNGKE-IYQLEVPIKIKN 838
Query: 366 KAKSNHQRVATKKKNVENYVTPECRG 391
KS Q ATK+ V+ Y PE R
Sbjct: 839 IPKSWDQMSATKQ--VKRYYFPELRA 862
>gi|342184301|emb|CCC93782.1| unnamed protein product [Trypanosoma congolense IL3000]
Length = 221
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 19/133 (14%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ---IGCLTVFATHYHSVAR-----------RLREEPNVA 435
RGT T+DG IA TL + + L +F+THYH++A+ RL E V
Sbjct: 81 RGTSTHDGYTIAHATLASMKERQPVPPLLLFSTHYHALAQEQHETAESVSPRLVEATRVQ 140
Query: 436 FEYMSY-IEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQM- 493
YM + + D + + TI FLY+LVPGIC +S+G VA LAGI +V T + ++
Sbjct: 141 LGYMDFTLSDADSSTLQTITFLYRLVPGICTRSYGVEVALLAGIFPGIVNMARTKSLELA 200
Query: 494 ---EARHNLRQLF 503
E + +LR +
Sbjct: 201 KWYERQRDLRTIL 213
>gi|328766455|gb|EGF76509.1| hypothetical protein BATDEDRAFT_21067 [Batrachochytrium
dendrobatidis JAM81]
Length = 923
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 62/106 (58%), Gaps = 1/106 (0%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A E + IGC T+FATH+H ++ + P V ++S + +
Sbjct: 742 RGTSTYDGFGLAWAIAEHIAKHIGCFTLFATHFHELSNLADQVPFVKNLHVSALLSTLSS 801
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
G ++ LYK++PG+C +SFG +VAELA P+ VVK A ++E
Sbjct: 802 GPKSLTLLYKVMPGVCDQSFGIHVAELAAFPDSVVKIAKRKAAELE 847
>gi|408389823|gb|EKJ69247.1| hypothetical protein FPSE_10585 [Fusarium pseudograminearum CS3096]
Length = 1210
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 46/71 (64%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+I+D +RR P PDY+ +T+YVPP K +P Q+W IK +D ++FFK GKFYEL+
Sbjct: 298 NIMDKERRKPDDPDYDKRTIYVPPAAWNKFSPFETQYWKIKQNLWDTIVFFKKGKFYELY 357
Query: 237 HMDAVIGADEL 247
DA +G E
Sbjct: 358 ENDATVGHQEF 368
Score = 65.1 bits (157), Expect = 9e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 53/114 (46%), Gaps = 8/114 (7%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSY--IEDKR 446
RGT + DG +A+ L IGC+ FATHYHS+A P + M ED+R
Sbjct: 1057 RGTSSYDGVAVAQAVLHHVATHIGCVGYFATHYHSLATEFENHPEIRARRMQIHVDEDER 1116
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR 500
+ F+YKL G+ SFG + A + GI V+ A + E L+
Sbjct: 1117 R-----VTFMYKLEDGVAEGSFGMHCAAMCGISSRVIDRAEVAAKEWEHTSRLK 1165
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD+ E L Y+ AFD +A +IP+ G++ ++D+ D I I+++++ L +
Sbjct: 756 MPDLDEPLSYWRTAFDRNKARDEKILIPERGIEDDFDQSSDRIDEIKQQLEDLLAEKKKE 815
Query: 339 FGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPEC 389
F C ++ ++ K + Y LE P K S Q AT K+V+ Y P+
Sbjct: 816 FKCKLLKFTHVGK--EIYQLEAP-KSVKVPSSFRQMSAT--KDVKRYYFPDL 862
>gi|219850607|ref|YP_002465040.1| DNA mismatch repair protein MutS [Chloroflexus aggregans DSM 9485]
gi|219544866|gb|ACL26604.1| DNA mismatch repair protein MutS [Chloroflexus aggregans DSM 9485]
Length = 968
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 44/108 (40%), Positives = 63/108 (58%), Gaps = 8/108 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL---QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG IAR +E ++GC T+FATHYH + E P V +M+ +E
Sbjct: 792 RGTSTYDGMAIARAVVEYIHNEPRLGCRTLFATHYHELTALDTELPRVRNFHMAAVE--- 848
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
DG +VFL++L PG +S+G +VAELAGIP V++ + ++E
Sbjct: 849 RDG--RVVFLHELRPGGADRSYGIHVAELAGIPASVIRRANDLLAELE 894
>gi|156083216|ref|XP_001609092.1| DNA repair protein [Babesia bovis T2Bo]
gi|154796342|gb|EDO05524.1| DNA repair protein, putative [Babesia bovis]
Length = 1313
Score = 78.6 bits (192), Expect = 8e-12, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 58/102 (56%), Gaps = 5/102 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSY-IEDKRND 448
RGT T + IA LEK IGC VF TH+H V ++ NV+ +M+ ++DK
Sbjct: 1174 RGTSTFEATAIAAACLEKLSAIGCRGVFTTHFHEVWSYAKKLDNVSLCHMAASLDDKEK- 1232
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
+I FLYKL G+CP+S G +VA LAGIP+ V V+
Sbjct: 1233 ---SITFLYKLSLGLCPESHGIHVARLAGIPKHVTDMAEVVS 1271
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/73 (45%), Positives = 44/73 (60%), Gaps = 8/73 (10%)
Query: 178 ILDADRRSPKHPDYNPKTLYVPPEFLK--------KQTPCMGQWWTIKSQNFDCVLFFKV 229
I D D R P +Y+P T+++PP+ + T CM QWW IK FD +LFFK+
Sbjct: 351 IKDRDGRKPTDDNYDPSTIWIPPKGHRWATEYRSGHYTDCMQQWWNIKQDRFDQLLFFKM 410
Query: 230 GKFYELFHMDAVI 242
G+FYELF+ DA I
Sbjct: 411 GRFYELFYHDACI 423
>gi|116203755|ref|XP_001227688.1| hypothetical protein CHGG_09761 [Chaetomium globosum CBS 148.51]
gi|88175889|gb|EAQ83357.1| hypothetical protein CHGG_09761 [Chaetomium globosum CBS 148.51]
Length = 1221
Score = 78.6 bits (192), Expect = 9e-12, Method: Compositional matrix adjust.
Identities = 70/266 (26%), Positives = 118/266 (44%), Gaps = 61/266 (22%)
Query: 15 SESSTPASSKGKKTSKSPAKSEDDSPV--TKRPRRKSAKRVKSAIQSDSEPDDMLQDNGS 72
S +S+P+ K S + + +DD V T + RR +R ++A+ + +
Sbjct: 135 SLNSSPSRKVKKVVSYAESSDDDDEAVFATLKARRSGQRRPRAAVPDEDD---------- 184
Query: 73 EDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTK 132
E+E + EEE ++ + S+A P K+ ++ ++KS P K
Sbjct: 185 -------DDGDTYEAEANDFEEEDDDLGDFVVSDDSDA---PSKSKKRKRPAAKSSAPRK 234
Query: 133 KPKLTAPSTPSTPSFPVSDTSETTP-STSGAQDWSHN----------------------- 168
K + S+P+ P + E P STS AQ W+++
Sbjct: 235 KSNFS--SSPAPPPLDDDEVMEDIPASTSTAQKWTYDPDNVETRDPAARAPPRKPTDPKT 292
Query: 169 -----------HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIK 217
Y +L +ILD ++ P HP+++P ++Y+PP + +P Q+W IK
Sbjct: 293 KPKAHTKEPEDRYPWLA--NILDGNKNPPGHPEFDPTSIYIPPLAERGFSPFEKQYWDIK 350
Query: 218 SQNFDCVLFFKVGKFYELFHMDAVIG 243
+ +D V+FFK GKFYEL+ DA IG
Sbjct: 351 KKLWDTVVFFKKGKFYELYENDATIG 376
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 72/157 (45%), Gaps = 20/157 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IGC+ FATHYHS+A + P V M D +
Sbjct: 1068 RGTSSYDGVAVAQAVLHHVASHIGCVGFFATHYHSLAAEFAQHPEVRARRMQIDVD---E 1124
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF----- 503
+ FLY+L G+ SFG + A + GIP V+ A + E L++
Sbjct: 1125 ARKRVTFLYRLEDGVAEGSFGMHCAAMCGIPGRVIDRAEVAAREWEHTSRLKESLERAKM 1184
Query: 504 --------IHKFASLVKSGEKV---DVEELQKALESV 529
+ ASL+ GE+V VE L KA+E++
Sbjct: 1185 GCYIPLGVLSDVASLLGDGEEVGERGVEVLLKAIEAL 1221
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 30/98 (30%), Positives = 55/98 (56%), Gaps = 6/98 (6%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD+ E L Y+E AFD A G +IP+ G+++++D +E++ I+ E+ L Q
Sbjct: 768 MPDLKEPLGYWETAFDRTMARD-GKLIPEKGIEEDFDNSQNELERIKGELHALLEKQKTA 826
Query: 339 FGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVA 375
C T+ +++ K+ Y +EVP A K +N ++++
Sbjct: 827 LKCKTIKFTDVGKEV--YQIEVPK--AVKVPTNWRQMS 860
>gi|401402358|ref|XP_003881229.1| DNA mismatch repair protein mutS, related [Neospora caninum
Liverpool]
gi|325115641|emb|CBZ51196.1| DNA mismatch repair protein mutS, related [Neospora caninum
Liverpool]
Length = 1487
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/178 (29%), Positives = 83/178 (46%), Gaps = 6/178 (3%)
Query: 355 YVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFL-QIGC 413
++L+ S + + K + + + V RGT T DG IA +LE Q+ C
Sbjct: 1282 FILQGASTFLVELKDVSELMTYGTRRSLAVVDELGRGTSTFDGTAIALASLEHITDQLQC 1341
Query: 414 LTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVA 473
+FATHYH + ++ P+V +M D+ ++ FLYKL GICPKS G +VA
Sbjct: 1342 RCLFATHYHLLCYEMQNHPHVVNVHMKAAIDEEQH---SLAFLYKLTEGICPKSHGIHVA 1398
Query: 474 ELAGIPEDVVKFG--TTVAFQMEARHNLRQLFIHKFASLVKSGEKVDVEELQKALESV 529
LAGI ++ ++ Q E R + A +++ +E L + ESV
Sbjct: 1399 RLAGIDSRILACAEEKSLRLQQEIVRQQRYWRLLGMAQMLEDATPDKLESLFQRKESV 1456
Score = 55.1 bits (131), Expect = 1e-04, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 52/108 (48%), Gaps = 15/108 (13%)
Query: 164 DWSHNHYQF-----LHPDHILD-ADRRSPK-HPDYNPKTLYVPP---EFLKKQ-----TP 208
D+ H QF P H+ D A RR+ DY+ +L++P + + TP
Sbjct: 409 DFYTYHRQFSFPPWADPAHMRDLAGRRAVDCGEDYDFSSLWIPAPDSQLARAHARPHLTP 468
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESG 256
M Q+W IK +FD ++ FK+GKFYEL + DA L +M G
Sbjct: 469 GMAQYWEIKKHHFDKLILFKIGKFYELVYGDACAAHRILDLKWMGGGG 516
>gi|294892329|ref|XP_002774009.1| DNA mismatch repair protein mutS, putative [Perkinsus marinus ATCC
50983]
gi|239879213|gb|EER05825.1| DNA mismatch repair protein mutS, putative [Perkinsus marinus ATCC
50983]
Length = 943
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 36/93 (38%), Positives = 58/93 (62%), Gaps = 2/93 (2%)
Query: 158 STSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIK 217
S +G+ +++ ++HPD++ D R P HPDY+ T+ VP TP + Q+W +K
Sbjct: 18 SIAGSNICRYSYPSWMHPDNLADEKGRRPDHPDYDQSTMKVPDLREGHCTPMLLQYWEVK 77
Query: 218 SQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+++FD + FKVGKFYE+F+ DAV + AC+
Sbjct: 78 AKHFDEITLFKVGKFYEIFYYDAVFA--QAACN 108
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 54/96 (56%), Gaps = 5/96 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA LE+ + IGC T+FATHYH +A E+ + + + N
Sbjct: 814 RGTSTFDGAAIAHAVLERISESIGCRTLFATHYHQLA----EDEGLHNTALYHQACLVNP 869
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
+ FLYK G CP+S +VA++AG+PE +V+
Sbjct: 870 ATREVTFLYKFTKGRCPQSHAMHVAKIAGLPEVIVE 905
>gi|389749124|gb|EIM90301.1| DNA mismatch repair protein MSH3 [Stereum hirsutum FP-91666 SS1]
Length = 1098
Score = 78.6 bits (192), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/116 (40%), Positives = 63/116 (54%), Gaps = 7/116 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIG-CLTVFATHYHSVARRL-REEPN-VAFEYMSYIEDKR 446
RGT T DG IA+ + +Q+ C T+F THY VA L R P V +M + E+ R
Sbjct: 943 RGTSTFDGMAIAQAAMHHLVQVKKCKTLFITHYPLVATELERRFPQEVQNLHMGFREESR 1002
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQM----EARHN 498
+GI I FLY+L G+ +SFG LAGIPE+V++ A +M E RH
Sbjct: 1003 INGIREISFLYRLTEGLATESFGIECGRLAGIPEEVLQASAVQAAKMRRQVEERHR 1058
>gi|328771739|gb|EGF81778.1| hypothetical protein BATDEDRAFT_86831 [Batrachochytrium dendrobatidis
JAM81]
Length = 1194
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/148 (33%), Positives = 69/148 (46%), Gaps = 14/148 (9%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L + + L +F+THY ++ P + +MS+ D+ N
Sbjct: 1039 RGTSTYDGYAIAYAVLNHLITNVRSLGLFSTHYGTLTNEFHNHPLIKMMHMSFFADQVNK 1098
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR----------HN 498
+ FLYKL G CPKS+G NVA LA +P+ +V VA E R H
Sbjct: 1099 ---QVTFLYKLEHGNCPKSYGMNVASLANVPKKIVDRAEDVAKSFEERQVCHQSSQQAHQ 1155
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQKAL 526
+ FA LV+ +K + KA+
Sbjct: 1156 FSLGSLITFAKLVEYAKKPSLSVTDKAI 1183
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 36/82 (43%), Positives = 51/82 (62%)
Query: 162 AQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNF 221
AQ N ++ I DA++ +P P+Y+P+TLY+PP TP Q+W IK+ ++
Sbjct: 302 AQFKDKNELRYSWLQDIKDANKNAPDDPNYDPRTLYIPPSAWANFTPFEKQFWEIKAAHW 361
Query: 222 DCVLFFKVGKFYELFHMDAVIG 243
D V+FFK GKFYEL+ DA IG
Sbjct: 362 DTVVFFKKGKFYELYEKDADIG 383
Score = 45.4 bits (106), Expect = 0.087, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 58/114 (50%), Gaps = 10/114 (8%)
Query: 280 PDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLR---TQC 336
P++ EL++YF+ AF+H++A G I +G D +D + +IEK++ Y R +
Sbjct: 789 PELMELIQYFKVAFNHQDAFDEGKIRLHSGYDDVFDSADKNVVAIEKKLDVYRRECEKKL 848
Query: 337 AHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
++ G T ++ + +E+P+K K S+ V + K V Y T + R
Sbjct: 849 SYNGITF----KNIGKEIFQMEIPAKI--KVPSDWT-VMSNTKAVNRYYTTKSR 895
>gi|365990916|ref|XP_003672287.1| hypothetical protein NDAI_0J01520 [Naumovozyma dairenensis CBS 421]
gi|343771062|emb|CCD27044.1| hypothetical protein NDAI_0J01520 [Naumovozyma dairenensis CBS 421]
Length = 1260
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 53/176 (30%), Positives = 90/176 (51%), Gaps = 4/176 (2%)
Query: 68 QDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKS 127
+D+ ++ E++P K +E S + +E L +E+ SS + ++ + K+ S S
Sbjct: 191 EDSDNDAEFIPDKTVLEQLSSDND-DEPLNHDLEN-FESSDDDDILALSETKKKLKPSTS 248
Query: 128 GQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPK 187
+ PS P+ + T T ++ + YQ+L + DA RR P
Sbjct: 249 SSSSSFLMKKKPSFKIQPNKKRTVTPPTQSKSNKFNKTNEERYQWLVDER--DAQRRPPT 306
Query: 188 HPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
P+Y+P++LY+P K TP Q+W IKS +DC++FFK GKF+EL+ DA++
Sbjct: 307 DPEYDPRSLYIPSAAWNKFTPFEKQYWEIKSTMWDCIVFFKKGKFFELYEKDALLA 362
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L I L FATHY ++ + P V MS + D D
Sbjct: 1083 RGGSSSDGFAIAESVLHHVATHIQSLGFFATHYGTLGLGFKGHPQVRPMKMSILVD---D 1139
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ FLYKLV G SFG +VA + GIP+++V A +E
Sbjct: 1140 DTRNVTFLYKLVDGQSEGSFGMHVASMCGIPKEIVDNAQDAADNLE 1185
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 35/126 (27%), Positives = 64/126 (50%), Gaps = 8/126 (6%)
Query: 267 LCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEK 326
L Y Q P+ +SE + +AFD +A IIP++G++ ++D+ + +I+ +E
Sbjct: 760 LSIYFQQIPNTLSKAVSE----WTDAFDRMKAVEEDIIIPESGIEPDFDKSLSDIRQLEN 815
Query: 327 EIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYV 385
E+Q L+ F C T+ Y ++ K + Y +EVP + N ++A K+ + Y
Sbjct: 816 ELQDLLQDYRRTFKCATIQYKDSGK--EIYTIEVPVAATKRIPPNWVQMAA-NKSTKRYY 872
Query: 386 TPECRG 391
+ E R
Sbjct: 873 SDEVRA 878
>gi|407849123|gb|EKG03964.1| mismatch repair protein MSH6, putative [Trypanosoma cruzi]
Length = 1002
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/141 (34%), Positives = 73/141 (51%), Gaps = 25/141 (17%)
Query: 390 RGTGTNDGCVIARVTLEKF---LQIGCLTVFATHYHSVARRLR--EEPNVA--------- 435
RGT T+DG IA TL L + L +F+THYH++A+ + NV+
Sbjct: 851 RGTSTHDGYAIAHATLHSLKERLPVSPLLLFSTHYHALAQEQLGGDAVNVSSLAPDHGSV 910
Query: 436 --FEYMSY-IEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQ 492
YM + I + + DG+ I FLY+LV GIC +S+G VA LAGIP +V + +
Sbjct: 911 VQLGYMDFAISETKKDGVSAITFLYRLVSGICTRSYGVEVALLAGIPSSLVHMAAIKSHE 970
Query: 493 MEAR-------HNLRQLFIHK 506
+ + H +RQ F+H+
Sbjct: 971 LASWNDRQKDIHTIRQ-FLHE 990
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 23/71 (32%), Positives = 36/71 (50%)
Query: 193 PKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYM 252
P ++ +P + L Q+W IK++ FD ++ FK GKFYEL+ DA I E +
Sbjct: 30 PSSITIPAKELDAMAGMERQYWEIKAKYFDVLILFKKGKFYELYDQDAAIAHREFGLKLV 89
Query: 253 KESGCTGESTL 263
+ G+ L
Sbjct: 90 FSTTNRGKMRL 100
>gi|321253333|ref|XP_003192701.1| hypothetical protein CGB_C2370C [Cryptococcus gattii WM276]
gi|317459170|gb|ADV20914.1| conserved hypothetical protein [Cryptococcus gattii WM276]
Length = 1189
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 46/126 (36%), Positives = 71/126 (56%), Gaps = 4/126 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRL-REEPN-VAFEYMSYIEDKRN 447
RGT T DG IA TL +IGC T+F THY +A+ L RE+P+ ++ +MS+ E K
Sbjct: 1031 RGTSTYDGAAIAYATLSHIAEIGCNTLFVTHYPMIAQDLAREKPDKISNWHMSFDEIKMP 1090
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG--TTVAFQMEARHNLRQLFIH 505
DG I FLY+L G+ SFG A LAG+P+ ++ + + + E + LR +
Sbjct: 1091 DGSAEITFLYQLTRGLQEASFGVWCARLAGLPKPILDNAQMRSNSLKTETQERLRGIVAR 1150
Query: 506 KFASLV 511
+ + ++
Sbjct: 1151 RVSQML 1156
>gi|148657805|ref|YP_001278010.1| DNA mismatch repair protein MutS [Roseiflexus sp. RS-1]
gi|189083188|sp|A5UZK7.1|MUTS_ROSS1 RecName: Full=DNA mismatch repair protein MutS
gi|148569915|gb|ABQ92060.1| DNA mismatch repair protein MutS [Roseiflexus sp. RS-1]
Length = 1085
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 65/110 (59%), Gaps = 8/110 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL---QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG IA+ +E ++GC T+FATHYH + R P + +M+ E
Sbjct: 895 RGTSTYDGMAIAQAVIEYIHNEPRLGCRTLFATHYHELTDLERTLPRLKNYHMAATE--- 951
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
DG +VFL++L PG +S+G +VAELAGIP+ V++ + + ++E R
Sbjct: 952 QDG--RVVFLHELRPGGADRSYGIHVAELAGIPQSVIRRASELLAELERR 999
>gi|89255725|ref|YP_513086.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
holarctica LVS]
gi|156501680|ref|YP_001427745.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|254367101|ref|ZP_04983135.1| DNA mismatch repair protein mutS [Francisella tularensis subsp.
holarctica 257]
gi|422938218|ref|YP_007011365.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
holarctica FSC200]
gi|423050037|ref|YP_007008471.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
holarctica F92]
gi|122501231|sp|Q2A5B5.1|MUTS_FRATH RecName: Full=DNA mismatch repair protein MutS
gi|189030725|sp|A7N9Y6.1|MUTS_FRATF RecName: Full=DNA mismatch repair protein MutS
gi|89143556|emb|CAJ78735.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
holarctica LVS]
gi|134252925|gb|EBA52019.1| DNA mismatch repair protein mutS [Francisella tularensis subsp.
holarctica 257]
gi|156252283|gb|ABU60789.1| DNA mismatch repair protein [Francisella tularensis subsp.
holarctica FTNF002-00]
gi|407293369|gb|AFT92275.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
holarctica FSC200]
gi|421950759|gb|AFX70008.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
holarctica F92]
Length = 844
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG +A+ EKF Q+G T+FATHY + ++ PNV + E K
Sbjct: 693 RGTSTFDGLALAKACAEKFAQMGAFTLFATHYFELTELAKQYPNVCNIHFEAKEYK---- 748
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
D I F++K V G KS+G VA+LAGI +DV++ + +E + L
Sbjct: 749 -DNIYFMHKAVTGAAKKSYGIQVAKLAGISQDVLESAKQNLYNLEKKQQL 797
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGES 261
+ TP + Q+ IKSQ D +LF+++G FYELF DA A+ L + GES
Sbjct: 4 ISNHTPMIQQYLKIKSQYQDILLFYRMGDFYELFFDDAKKAAELLDITLTARGKSNGES 62
>gi|115314221|ref|YP_762944.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
holarctica OSU18]
gi|122325742|sp|Q0BNM7.1|MUTS_FRATO RecName: Full=DNA mismatch repair protein MutS
gi|115129120|gb|ABI82307.1| DNA mismatch repair protein MutS [Francisella tularensis subsp.
holarctica OSU18]
Length = 855
Score = 78.2 bits (191), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 42/110 (38%), Positives = 60/110 (54%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG +A+ EKF Q+G T+FATHY + ++ PNV + E K
Sbjct: 704 RGTSTFDGLALAKACAEKFAQMGAFTLFATHYFELTELAKQYPNVCNIHFEAKEYK---- 759
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
D I F++K V G KS+G VA+LAGI +DV++ + +E + L
Sbjct: 760 -DNIYFMHKAVTGAAKKSYGIQVAKLAGISQDVLESAKQNLYNLEKKQQL 808
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 23/59 (38%), Positives = 32/59 (54%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGES 261
+ TP + Q+ IKSQ D +LF+++G FYELF DA A+ L + GES
Sbjct: 15 ISNHTPMIQQYLKIKSQYQDILLFYRMGDFYELFFDDAKKAAELLDITLTARGKSNGES 73
>gi|145479585|ref|XP_001425815.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124392887|emb|CAK58417.1| unnamed protein product [Paramecium tetraurelia]
Length = 1108
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 34/70 (48%), Positives = 45/70 (64%)
Query: 190 DYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELAC 249
D +P TL++P K T CM Q+W KS+NFD ++FFK+GKFYELF+ DA IG L
Sbjct: 211 DADPTTLFIPQNEFNKLTKCMQQFWKYKSENFDKIIFFKLGKFYELFYEDAYIGNKYLDL 270
Query: 250 SYMKESGCTG 259
++M TG
Sbjct: 271 NWMGRKMHTG 280
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 43/136 (31%), Positives = 72/136 (52%), Gaps = 18/136 (13%)
Query: 384 YVTPEC-RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSV---ARRLREEPNVAFEY 438
++T E RGT T DG IA + ++ I C +FATH+ + A+ + E NV +
Sbjct: 974 FITDELGRGTSTYDGVAIASAVMHYLIKTIQCRVLFATHFRILIEEAKLISEVTNV---H 1030
Query: 439 MS-YIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA--FQMEA 495
M+ YI + + ++FLY+L G C SFG NVA++ GI + ++ +A F+ +
Sbjct: 1031 MACYISNGK------VIFLYRLKEGACEASFGINVAKVVGIEDSIIMKAEEMANFFENKV 1084
Query: 496 RHNLRQLFIHKFASLV 511
+ N Q + KF ++
Sbjct: 1085 QKNTEQT-LQKFNQII 1099
>gi|299742330|ref|XP_001832397.2| DNA mismatch repair protein msh6 [Coprinopsis cinerea okayama7#130]
gi|298405134|gb|EAU89431.2| DNA mismatch repair protein msh6 [Coprinopsis cinerea okayama7#130]
Length = 1269
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 47/129 (36%), Positives = 67/129 (51%), Gaps = 9/129 (6%)
Query: 125 SKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNH------YQFLHPDHI 178
SK+ + K + PS P+T + S T + AQD + + FL I
Sbjct: 267 SKTKKAPAKKNIAKPSAPATGT-SSGGNSFLTAAEQRAQDKKVDKQKAEAPFSFLQ--DI 323
Query: 179 LDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHM 238
D D R P PDY+P+T+Y+P + + TP Q+W IK ++D VLFF+ GKF+EL+
Sbjct: 324 RDKDGRRPGEPDYDPRTIYIPKKAWAEFTPFEKQFWEIKQNHYDTVLFFQKGKFFELYED 383
Query: 239 DAVIGADEL 247
DA IG E
Sbjct: 384 DARIGHQEF 392
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 58/117 (49%), Gaps = 8/117 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGC-LTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L K L FATHY S+ PN+ +MS + D+
Sbjct: 1100 RGTSTFDGMAIAGSVLHKLATHTLPLAFFATHYGSLTDDYAYHPNIRRMHMSTMVDEERQ 1159
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTV----AFQMEARHNLRQ 501
+ FLYKLV G SFG +VA LAG+P+ VV+ V A Q + R L++
Sbjct: 1160 ---QLTFLYKLVDGAATSSFGSHVARLAGVPDTVVERADDVSAEFAKQFKERLQLKK 1213
>gi|412993033|emb|CCO16566.1| DNA mismatch repair protein MutS [Bathycoccus prasinos]
Length = 1374
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 50/94 (53%), Gaps = 10/94 (10%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLK----------KQTPCMGQWWTIKSQ 219
+ F+ P + D + P Y+P TL +P F K K +P QWW K+
Sbjct: 333 FSFMFPPKLKDQNGNLFDSPKYDPTTLLLPKTFPKSFPSTDGSQHKISPGQQQWWQFKAT 392
Query: 220 NFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
+FD VL FK+GKFYE++ MDA +G EL YMK
Sbjct: 393 HFDAVLLFKMGKFYEMYEMDAHVGVKELGLIYMK 426
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 59/107 (55%), Gaps = 4/107 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI--GCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DGC IA ++ K L + T+F+THYH +A + +++ + D
Sbjct: 1209 RGTSTTDGCAIA-LSCGKHLMLRNKSRTLFSTHYHKLADYFAFASSAILKHVEALVDSTR 1267
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ F +K+V G CPKS G NVA LAG+PE V++ + VA + E
Sbjct: 1268 VP-PRVAFTHKVVSGSCPKSHGVNVARLAGLPETVLQTASAVASRAE 1313
>gi|292491934|ref|YP_003527373.1| DNA mismatch repair protein MutS [Nitrosococcus halophilus Nc4]
gi|291580529|gb|ADE14986.1| DNA mismatch repair protein MutS [Nitrosococcus halophilus Nc4]
Length = 914
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 49/127 (38%), Positives = 71/127 (55%), Gaps = 8/127 (6%)
Query: 369 SNHQRVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARR 427
+N R AT K V + RGTGT+DG IA+ E Q I T+F THYH +A
Sbjct: 713 ANILRYATSKSLV--ILDEVGRGTGTSDGQAIAQAVAEMLAQEIKARTLFTTHYHQLAAL 770
Query: 428 LREEPNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGT 487
P++A ++ E++ + + FLYK+VPG PKS+G VA+LAG+P VV+ +
Sbjct: 771 ADRIPSMANARLAVREEQ-----EEVSFLYKVVPGAAPKSYGIYVAKLAGLPPAVVQRAS 825
Query: 488 TVAFQME 494
+ Q+E
Sbjct: 826 ELLAQLE 832
Score = 48.1 bits (113), Expect = 0.014, Method: Compositional matrix adjust.
Identities = 23/56 (41%), Positives = 33/56 (58%), Gaps = 5/56 (8%)
Query: 192 NPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL 247
N + + PPE T M Q+ IK+Q D +LFF+ G FYE+F+ DA + + EL
Sbjct: 38 NTQAVQQPPE-----TDMMAQYRGIKAQYQDALLFFRFGDFYEMFYEDAALASREL 88
>gi|409048502|gb|EKM57980.1| hypothetical protein PHACADRAFT_116507 [Phanerochaete carnosa
HHB-10118-sp]
Length = 1277
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 43/115 (37%), Positives = 58/115 (50%)
Query: 133 KPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYN 192
+PKL S P S + T+ + ++ N F + D D P P Y+
Sbjct: 280 RPKLAKKSIPKGGSSNIFLTAAEQRQQAQKEEKKSNEDPFGFLVDVRDKDGVRPSEPGYD 339
Query: 193 PKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL 247
P+TLY+PP+ K TP Q+W IK +FD VLFF+ GKF EL+ DA IG E
Sbjct: 340 PRTLYIPPKAWKAFTPFEKQFWEIKQNHFDTVLFFQKGKFLELYEEDARIGHQEF 394
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 59/103 (57%), Gaps = 6/103 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYM-SYIEDKRN 447
RGT T DG IA L + L+ FATHY S+ PN+ +M ++++D+
Sbjct: 1106 RGTSTYDGMAIAGAVLHQLATHTLSLSFFATHYGSLTDDYAYHPNIRNMHMATHVDDENR 1165
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
+ ++FLYKLV G+ SFG +VA LAG+P++V++ V+
Sbjct: 1166 E----LIFLYKLVEGVASSSFGTHVANLAGVPQEVIQRAEIVS 1204
Score = 45.1 bits (105), Expect = 0.092, Method: Compositional matrix adjust.
Identities = 30/104 (28%), Positives = 54/104 (51%), Gaps = 6/104 (5%)
Query: 259 GESTLLTQLCNYESQTPSGCF---PDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYD 315
G S L ++S+T G PD++ +K + F+ E S ++P+ G D+EYD
Sbjct: 779 GLSALADTAEGFKSRTVFGLLRSAPDLAPHIKNVKAMFEITEGSD--ELMPREGKDEEYD 836
Query: 316 EVMDEIKSIEKEIQTYLRTQCAHFGCTVIY-SEAQKKQKKYVLE 358
VM+EI +E+ ++T L+ G + Y AQ ++ Y+++
Sbjct: 837 SVMEEINELERTLETELKKLEKKLGIKLSYWHSAQGTKEIYLVQ 880
>gi|255936397|ref|XP_002559225.1| Pc13g07990 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211583845|emb|CAP91868.1| Pc13g07990 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1207
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 76/271 (28%), Positives = 116/271 (42%), Gaps = 64/271 (23%)
Query: 14 DSESSTPASSKGKKT---SKSPAKSEDDSPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDN 70
D E ++ KGKK +S ++ EDD V RP RK ++A + +EP+
Sbjct: 101 DDEQENGSALKGKKQISYKESDSEGEDDDEVIFRPSRKDRVSGRAAKRRRTEPE------ 154
Query: 71 GSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQP 130
SEDE+ + ++EL++ V S+ E+ N KR S Q
Sbjct: 155 -SEDEF-------NDAGDGGYSDDELDDFV---VADDSDEEIVKSSNKRKR----PSTQS 199
Query: 131 TKKP-----------------KLTAP------STPSTPSFPVSDT----------SETTP 157
+KP L P T +F +T S T
Sbjct: 200 ARKPISKSSSVPAPSPPPDDIDLEIPEGEGSAGTAKKWAFDPENTEPRKERAVVASTKTA 259
Query: 158 STSGAQDWSH-----NHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQ 212
++S ++ +H Y +L ++ D D HPDY+P+T+Y+PP + +P Q
Sbjct: 260 ASSAKKEKAHIKEPEQRYSWLA--NLKDIDGNPQGHPDYDPRTIYIPPLAWSRFSPFEKQ 317
Query: 213 WWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
+W IK + +D V+FFK GKFYEL+ DA IG
Sbjct: 318 YWEIKQKFWDTVVFFKKGKFYELYENDATIG 348
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/113 (36%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IG L FATHYHS+A P +A + M+ D D
Sbjct: 1046 RGTSSYDGVAVAQAVLHHIATHIGALGFFATHYHSLAAEFENHPEIAPKRMAIHVD---D 1102
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLYKL G+ SFG + A + GIP V++ A Q E L++
Sbjct: 1103 VERRVAFLYKLEDGVAEGSFGMHCASMCGIPSKVIECAENAAQQWEHTSRLKE 1155
Score = 64.7 bits (156), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 41/139 (29%), Positives = 71/139 (51%), Gaps = 11/139 (7%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
+KES +++ QL PD++ LL Y++ AFD +A G ++P++GV+
Sbjct: 725 LKESDTGSGESIIGQLTT--------AMPDLASLLGYWKTAFDRPKAKENGILVPESGVE 776
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNH 371
+++D + I+ + +++ T L+ G + I K+ Y LEVP K + K +
Sbjct: 777 EDFDNSQENIEQLHRDLDTLLKKARRDLGSSAICYRDNGKE-IYQLEVPIKVKNIPKDWN 835
Query: 372 QRVATKKKNVENYVTPECR 390
Q ATK+ V+ Y PE R
Sbjct: 836 QMSATKQ--VKRYYFPELR 852
>gi|241641665|ref|XP_002411005.1| hypothetical protein IscW_ISCW010238 [Ixodes scapularis]
gi|215503659|gb|EEC13153.1| hypothetical protein IscW_ISCW010238 [Ixodes scapularis]
Length = 287
Score = 77.8 bits (190), Expect = 1e-11, Method: Compositional matrix adjust.
Identities = 32/45 (71%), Positives = 36/45 (80%)
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M QWW +KSQ+FD VLFFKVGKFYEL+HMDAV G +EL YMK
Sbjct: 198 AMKQWWDMKSQHFDVVLFFKVGKFYELYHMDAVTGVEELGLVYMK 242
>gi|449544351|gb|EMD35324.1| hypothetical protein CERSUDRAFT_124668 [Ceriporiopsis subvermispora
B]
Length = 1305
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/142 (33%), Positives = 70/142 (49%), Gaps = 3/142 (2%)
Query: 106 SSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDW 165
+SSE E G K+ SG+P K + ++ S SF ++ + +
Sbjct: 284 ASSEGENESDAAGTKKSTKKSSGRPPLKKEASSKSVGGNNSF-LTAAEQRAQQQKAEKKQ 342
Query: 166 SHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVL 225
S + + FL + D D P P Y+P+TLY+PP+ TP Q+W IK ++D VL
Sbjct: 343 SEDPFSFLV--DVKDKDGVRPGEPGYDPRTLYIPPKAWNGFTPFEKQFWEIKQNHYDTVL 400
Query: 226 FFKVGKFYELFHMDAVIGADEL 247
FF+ GKF EL+ DA IG E
Sbjct: 401 FFQKGKFLELYEEDARIGHREF 422
Score = 69.7 bits (169), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 58/103 (56%), Gaps = 6/103 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYM-SYIEDKRN 447
RGT T DG IA L + L+ FATHY S+ PN+ +M + ++D++
Sbjct: 1134 RGTSTYDGMAIAGAVLHQLATHTLALSFFATHYGSLTDDYAYHPNIKNMHMETLVDDEKR 1193
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
+ +VFLYKLV G+ SFG +VA LAG+P +VV+ V+
Sbjct: 1194 E----LVFLYKLVEGVASSSFGTHVANLAGVPIEVVERAEVVS 1232
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 31/108 (28%), Positives = 54/108 (50%), Gaps = 5/108 (4%)
Query: 259 GESTLLTQLCNYESQTPSGCF---PDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYD 315
G S L +++SQT SG P++ +K+ + F E + A ++P+ G D+ YD
Sbjct: 806 GLSQLAETAASFDSQTISGLLRSAPNLLPNIKHVKAMFKAPEGN-ADELVPEDGKDEVYD 864
Query: 316 EVMDEIKSIEKEIQTYLRTQCAHFGCTVIY-SEAQKKQKKYVLEVPSK 362
+M+EI +E+E+ L+ G + Y AQ + Y ++ SK
Sbjct: 865 GIMEEIHGLEQELDDELKALERKLGIKLTYWHSAQGTKDIYQVQTRSK 912
>gi|403411535|emb|CCL98235.1| predicted protein [Fibroporia radiculosa]
Length = 1254
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 69/140 (49%), Gaps = 2/140 (1%)
Query: 125 SKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRR 184
+KS + ++P+L + P+ ++ + + + + FL + D D
Sbjct: 257 TKSTRKVQRPQLGRDTNPNGSHTFLTAAEQRAQQQKAVKKNIEDPFSFLQ--DVRDKDGL 314
Query: 185 SPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGA 244
P P Y+P+TLYVP + K+ TP Q+W IK +FD +LFF+ GKF EL+ DA IG
Sbjct: 315 RPGEPGYDPRTLYVPAKAWKEFTPFEKQFWEIKQNHFDTILFFQKGKFLELYEEDARIGH 374
Query: 245 DELACSYMKESGCTGESTLL 264
E + +E ES L
Sbjct: 375 TEFDLKFTREPLTAVESDRL 394
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/102 (40%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L + L+ FATHY S+ PN+ +M I D D
Sbjct: 1086 RGTSTYDGMAIAGAVLHQLATHTLALSFFATHYGSLTDDFAYHPNIRNMHMETIVD---D 1142
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
++FLYKLV G+ SFG +VA LAG+P +VV+ V+
Sbjct: 1143 EKRELIFLYKLVEGVASSSFGTHVASLAGVPSEVVERAEVVS 1184
Score = 45.1 bits (105), Expect = 0.093, Method: Compositional matrix adjust.
Identities = 41/140 (29%), Positives = 69/140 (49%), Gaps = 18/140 (12%)
Query: 259 GESTLLTQLCN----YESQTPSGCF---PDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
G S L +L + ++S+T G P++ LK+ ++ F K SA +IP+ G D
Sbjct: 754 GLSVGLAELADTAESFQSKTILGLLRSAPNLLPNLKHVKSMF-KKSGESADELIPEDGKD 812
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIY-SEAQKKQKKYVLEVPSKYASKAKSN 370
+ +DEVM+EI+ +E E+ L+ G + Y AQ ++ Y+++ +KA +
Sbjct: 813 EAFDEVMEEIQVLETELDDALKRLEKKVGIKLSYWHSAQGTKEIYLVQ------TKASED 866
Query: 371 HQRVATKK---KNVENYVTP 387
R TK K V Y+ P
Sbjct: 867 VPRDWTKSGGTKAVTRYIVP 886
>gi|452846757|gb|EME48689.1| hypothetical protein DOTSEDRAFT_141977 [Dothistroma septosporum
NZE10]
Length = 1041
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 130 PTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHP 189
P+ +P+ T PS + + + T+ D Y +L I DADR P HP
Sbjct: 79 PSTEPRRTVPSAKKSGTSSNGPAKKQKAHTTDPSD----RYPWLAS--IQDADRNPPDHP 132
Query: 190 DYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
DY+ +T+Y+PP +P Q+W IK + +D ++FFK GKFYEL+ DA IG
Sbjct: 133 DYDKRTIYIPPMAWNNFSPFEKQYWEIKQKFWDTIVFFKKGKFYELYENDATIG 186
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT + DG +A+ L +G L FATHYHS+A + P + + M+ +++D R
Sbjct: 883 RGTSSYDGVAVAQAVLHHVATHVGALGYFATHYHSLAAEFQHHPEIVAKRMAVHVDDDRR 942
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
D + FLY+L G+ S+G + A + GIP V+
Sbjct: 943 D----VTFLYQLENGVAEGSYGMHCAAMCGIPNKVI 974
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 36/113 (31%), Positives = 56/113 (49%), Gaps = 2/113 (1%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD+ LK++++AFD +A G IP+ GV++++DE + I I KE+Q L+
Sbjct: 579 MPDLDGALKHWKDAFDRTKAKEDGLFIPQPGVEEDFDESQERIDGIGKELQKLLQKARKD 638
Query: 339 FGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRG 391
G + I K+ Y LEVP K H + + K V+ + PE G
Sbjct: 639 LGSSTIKFTDNGKE-IYQLEVPLKVQGNI-PKHWKQMSATKQVKRWYFPELEG 689
>gi|134109935|ref|XP_776353.1| hypothetical protein CNBC5700 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|338818294|sp|P0CO93.1|MSH3_CRYNB RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|50259027|gb|EAL21706.1| hypothetical protein CNBC5700 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1191
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRL-REEPN-VAFEYMSYIEDKRN 447
RGT T DG IA TL +IGC T+F THY +VA+ L RE+P+ ++ +MS+ E +
Sbjct: 1033 RGTSTYDGIAIAYATLSHIAEIGCNTLFVTHYPTVAQDLAREKPDKISNWHMSFDEIQMP 1092
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
DG I FLY+L G+ SFG A LAG+P+ ++
Sbjct: 1093 DGGAEITFLYQLTRGLQEASFGVWCARLAGLPKPIL 1128
>gi|58264676|ref|XP_569494.1| hypothetical protein [Cryptococcus neoformans var. neoformans JEC21]
gi|338818295|sp|P0CO92.1|MSH3_CRYNJ RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|57225726|gb|AAW42187.1| conserved hypothetical protein [Cryptococcus neoformans var.
neoformans JEC21]
Length = 1191
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 60/96 (62%), Gaps = 2/96 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRL-REEPN-VAFEYMSYIEDKRN 447
RGT T DG IA TL +IGC T+F THY +VA+ L RE+P+ ++ +MS+ E +
Sbjct: 1033 RGTSTYDGIAIAYATLSHIAEIGCNTLFVTHYPTVAQDLAREKPDKISNWHMSFDEIQMP 1092
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
DG I FLY+L G+ SFG A LAG+P+ ++
Sbjct: 1093 DGGAEITFLYQLTRGLQEASFGVWCARLAGLPKPIL 1128
>gi|117556981|gb|ABK35676.1| putative mismatch repair protein [Tetrahymena thermophila]
Length = 1134
Score = 77.8 bits (190), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 188 HPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL 247
+P Y+P TLY+PP+ K T M Q+W IK+++FD ++ FK+GKFYELF+ DA+I L
Sbjct: 207 NPQYDPTTLYIPPQEFSKLTSAMKQYWQIKAKHFDKIILFKMGKFYELFYEDAIIATRLL 266
Query: 248 ACSYM-KESGC 257
++ KE C
Sbjct: 267 DITFTNKELHC 277
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L+ F++ I +FATH+ + LR ++F +M Y D ++
Sbjct: 999 RGTSTFDGVAIAFGILKYFIEKIQSRCIFATHFFLLINELRFYKEISFYHMEYYYDNKSK 1058
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++F YKL G SFG ++A++ GI + V+ + E
Sbjct: 1059 ---KLIFKYKLKQGNAESSFGIDLAKIVGIEQSVLNLAQKKQLEFE 1101
>gi|344229566|gb|EGV61451.1| DNA mismatch repair protein Msh6 [Candida tenuis ATCC 10573]
Length = 1167
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 37/75 (49%), Positives = 52/75 (69%), Gaps = 2/75 (2%)
Query: 169 HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFK 228
YQ+L +I DA++RS + P+Y+P++LY+P K TP Q+W IKS+ +D V+FFK
Sbjct: 242 RYQWLV--NIRDAEKRSSEDPNYDPRSLYIPQAAWSKFTPFEKQYWEIKSKMWDTVVFFK 299
Query: 229 VGKFYELFHMDAVIG 243
GKFYEL+ DAVI
Sbjct: 300 KGKFYELYENDAVIA 314
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 44/135 (32%), Positives = 59/135 (43%), Gaps = 16/135 (11%)
Query: 379 KNVENYVTPEC--------RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLR 429
K + N TP+ RG + DG IA L + I L FATH+ S+
Sbjct: 992 KKILNNATPKSLVILDELGRGGSSADGYAIAEAVLYQLCTHINTLGFFATHFGSLGLSFE 1051
Query: 430 EEPNVAFEYMSYI--EDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGT 487
P + M I +D RN I FLYKL G SFG NVA + GI ++V+
Sbjct: 1052 NHPQIKPMRMGIIAEQDSRN-----ITFLYKLEHGAASGSFGMNVASMCGIANEIVENAE 1106
Query: 488 TVAFQMEARHNLRQL 502
A E NL+++
Sbjct: 1107 MAAKNYERTSNLKKM 1121
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 44/157 (28%), Positives = 78/157 (49%), Gaps = 22/157 (14%)
Query: 277 GCFP-DMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQ 335
G FP D+ EL+ +E++FD +A S I P G+D+E+D+ MD+I ++E ++ TYL+
Sbjct: 708 GEFPSDLHELIAEWEDSFDRIQALS-DVISPTKGIDEEFDDSMDKINNLESQLNTYLQQY 766
Query: 336 CAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRGTGTN 395
+ I K+ +++E+P+K + K +T K V+ Y +PE +
Sbjct: 767 KRQYKSQEICFRDSGKE-IFLIELPNKIKNIPKDWQTMGSTSK--VKRYWSPEVK----- 818
Query: 396 DGCVIARVTLEK---------FLQIGCLTVFATHYHS 423
++ R LE+ L+ F THY++
Sbjct: 819 ---LLVRELLEQKELHKMVCDNLKSNMFKKFDTHYNT 852
>gi|118361141|ref|XP_001013801.1| MutS domain III family protein [Tetrahymena thermophila]
gi|89295568|gb|EAR93556.1| MutS domain III family protein [Tetrahymena thermophila SB210]
Length = 1139
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/71 (46%), Positives = 48/71 (67%), Gaps = 1/71 (1%)
Query: 188 HPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL 247
+P Y+P TLY+PP+ K T M Q+W IK+++FD ++ FK+GKFYELF+ DA+I L
Sbjct: 207 NPQYDPTTLYIPPQEFSKLTSAMKQYWQIKAKHFDKIILFKMGKFYELFYEDAIIATRLL 266
Query: 248 ACSYM-KESGC 257
++ KE C
Sbjct: 267 DITFTNKELHC 277
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 34/106 (32%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L+ F++ I +FATH+ + LR ++F +M Y D ++
Sbjct: 1004 RGTSTFDGVAIAFGILKYFIEKIQSRCIFATHFFLLINELRFYKEISFYHMEYYYDNKSK 1063
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++F YKL G SFG ++A++ GI + V+ + E
Sbjct: 1064 ---KLIFKYKLKQGNAESSFGIDLAKIVGIEQSVLNLAQKKQLEFE 1106
>gi|361129993|gb|EHL01869.1| putative DNA mismatch repair protein msh6 [Glarea lozoyensis 74030]
Length = 963
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 48/165 (29%), Positives = 67/165 (40%), Gaps = 37/165 (22%)
Query: 114 PMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHN----- 168
P+ + KR K + + +P T D E P TS AQ W ++
Sbjct: 133 PLDDDVKRSTKRKRPTTASTSRKRSNISPPTSYTQTQDDDEVIPGTSTAQQWKYDPENTE 192
Query: 169 ------------------------------HYQFLHPDHILDADRRSPKHPDYNPKTLYV 198
Y +L + D DR HPDY+P+T+Y+
Sbjct: 193 PLQPRSANIQKRPTSGKQKKEKACKSEPEKRYTWLA--KLEDLDRNPIGHPDYDPRTVYI 250
Query: 199 PPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
PP +P Q+W IK + FD ++FFK GKFYEL+ DA IG
Sbjct: 251 PPNAFANFSPFEKQYWEIKQKFFDTIVFFKKGKFYELYENDATIG 295
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 33/117 (28%), Positives = 55/117 (47%), Gaps = 8/117 (6%)
Query: 278 CFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYL---RT 334
PD+SE LK+++ AFD +A ++P+ G+++E+DE D I +E +QT L R
Sbjct: 692 AMPDLSEPLKWWKTAFDRSKAREYKLLVPERGIEEEFDESQDNIAEVEAALQTLLQKARK 751
Query: 335 QCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRG 391
Q + + K+ Y +EVP+ + A + Y PE +G
Sbjct: 752 QLGGNSSKINFKNIGKEV--YQIEVPTSITVPKGWSMMSTAA---GFKRYYNPELKG 803
>gi|302416361|ref|XP_003006012.1| DNA mismatch repair protein msh6 [Verticillium albo-atrum VaMs.102]
gi|261355428|gb|EEY17856.1| DNA mismatch repair protein msh6 [Verticillium albo-atrum VaMs.102]
Length = 1193
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+I D DR+SP P+YNP ++Y+PP K +P Q+W IK +D ++FFK GKF+EL+
Sbjct: 298 NITDIDRKSPGDPEYNPSSIYIPPGAWNKFSPFEKQYWAIKQNLWDTIVFFKKGKFFELY 357
Query: 237 HMDAVIG 243
DA IG
Sbjct: 358 ENDATIG 364
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L +GC+ FATHYHS+A P V M D+
Sbjct: 1042 RGTSSYDGVAVAQAVLHHVATHVGCIGFFATHYHSLATEFENHPEVRARRMQIHVDEAE- 1100
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF----- 503
+ FLYKL G+ SFG + A + GI +++ A + E L++
Sbjct: 1101 --RRVTFLYKLEDGVAEGSFGMHCAAMCGINNRIIERAEVAAREWEHTSRLKESLEKAKT 1158
Query: 504 --------IHKFASLVKSGEKV-DVEELQKALESV 529
+ ASL++ E+V +V+ L +A+E++
Sbjct: 1159 GCYIPLGMLSDVASLLRDEEEVGNVDVLLRAVEAM 1193
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
P++ E L Y++ AFD +A + +P+ G+++++DE D I I+K++ L + A
Sbjct: 741 MPNLDEPLSYWKTAFDRMKAKNDRMFLPERGIEEDFDESQDRIAEIKKDLGKLLEKKKAE 800
Query: 339 FGCTVI 344
C +
Sbjct: 801 LKCKTL 806
>gi|406864091|gb|EKD17137.1| DNA mismatch repair protein Msh6 [Marssonina brunnea f. sp.
'multigermtubi' MB_m1]
Length = 1949
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 33/67 (49%), Positives = 45/67 (67%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
++ D DR HPDY+P+T+Y+PP K +P Q+W IK + +D V+FFK GKFYEL+
Sbjct: 1022 NLQDMDRNPIGHPDYDPRTVYIPPGAWAKFSPFETQYWEIKQKFWDTVVFFKKGKFYELY 1081
Query: 237 HMDAVIG 243
DA IG
Sbjct: 1082 ENDATIG 1088
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/162 (29%), Positives = 72/162 (44%), Gaps = 5/162 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L +GC FATHYHS+A P +A + M D +
Sbjct: 1790 RGTSSYDGVAVAQSVLHHVATHVGCTGFFATHYHSLATEFAGHPEIAPKRMQIHVD---E 1846
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR-QLFIHKF 507
G + FLY+L G+ SFG + A + GIP V+ A + E L+ L K
Sbjct: 1847 GNRRVTFLYRLEDGVAEGSFGMHCAAMCGIPAKVIDRAEVAAKEWEHTSRLKDSLEKAKS 1906
Query: 508 ASLVKSGEKVDVEELQKALESVKSFESQTKKDLEDLPGGVAG 549
+ G + DV + + + ++ LE L +AG
Sbjct: 1907 GCYIPLGVQSDVSWILRQAVGEDVEDGVGERGLEVLMKAIAG 1948
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 59/110 (53%), Gaps = 8/110 (7%)
Query: 252 MKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
+ E G ++ +L N PD++ +K+++ AFDH++A + ++P+ GV+
Sbjct: 1469 LLERSAKGGKGIVDRLIN--------AMPDLTGPIKFWKTAFDHQKAKESRILVPERGVE 1520
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPS 361
+E+DE D I+ IE E++ L+ + G + + ++ Y LEVP+
Sbjct: 1521 EEFDESQDRIEEIEGELEDLLKRKRKELGGSQKINFKNIGKEVYQLEVPA 1570
>gi|358054512|dbj|GAA99438.1| hypothetical protein E5Q_06137 [Mixia osmundae IAM 14324]
Length = 1242
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 76/266 (28%), Positives = 110/266 (41%), Gaps = 40/266 (15%)
Query: 15 SESSTPASSKGKKTSKSPAKSEDDSPVTKRPRRKSAKRVKSAIQSDSEPD---------- 64
S S P + + ++ S A+SEDD K + + K+ K + SD E D
Sbjct: 135 SASLIPRKTGKRASAVSYAESEDDDDEPKSSKATTRKKSKVVLDSDDESDYKIDQDDKAS 194
Query: 65 -DMLQDNGSED---------------EYVPPKAEVES-------ESEHSSGEEELEESVE 101
D+L SED + P K+ +S ESE S+ E EL E +
Sbjct: 195 PDLLSVASSEDLRSDASLSPAPRPSTKKRPAKSSSKSKARAKPAESERSASELELSEDDD 254
Query: 102 DPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSG 161
P + A+ R + S + T P + + E
Sbjct: 255 KPQKLAPLAKQREAARKAIRAVQIGSAIRDEGEVGTGPQSLGGGAHKSRAELEKIK---- 310
Query: 162 AQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNF 221
Q + ++FL DA++ P H DY+P TLYVP + ++ T Q+W IK +F
Sbjct: 311 -QKAKEDAFEFLVDPR--DANKNRPGHADYDPSTLYVPTKAMENLTQFEQQFWEIKKNHF 367
Query: 222 DCVLFFKVGKFYELFHMDAVIGADEL 247
D VLFF+ GKFYEL+ DA IG E
Sbjct: 368 DTVLFFQKGKFYELYENDARIGHSEF 393
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/118 (34%), Positives = 59/118 (50%), Gaps = 14/118 (11%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIE----- 443
RGT + DG IA TL + C+ FATH+ S+ F Y + I
Sbjct: 1077 RGTESGDGYAIAFATLHALATRNNCIGFFATHFTSLVSD--------FAYHTQIRPCCMA 1128
Query: 444 DKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ ND + FLY+LV G KS+G NVA++AGIP D+V+ ++ Q E + R+
Sbjct: 1129 TEMNDNTREVTFLYRLVDGATTKSYGPNVAKMAGIPSDLVERAIAISSQFEVQTKQRE 1186
>gi|346974058|gb|EGY17510.1| DNA mismatch repair protein msh6 [Verticillium dahliae VdLs.17]
Length = 1211
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/67 (47%), Positives = 45/67 (67%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+I D DR+SP P+YNP ++Y+PP K +P Q+W IK +D ++FFK GKF+EL+
Sbjct: 298 NITDIDRKSPGDPEYNPSSIYIPPGAWNKFSPFEKQYWAIKQNLWDTIVFFKKGKFFELY 357
Query: 237 HMDAVIG 243
DA IG
Sbjct: 358 ENDATIG 364
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 45/155 (29%), Positives = 72/155 (46%), Gaps = 18/155 (11%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L +GC+ FATHYHS+A P V M D+
Sbjct: 1060 RGTSSYDGVAVAQAVLHHVATHVGCIGFFATHYHSLATEFENHPEVRARRMQIHVDEAE- 1118
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF----- 503
+ FLYKL G+ SFG + A + GI +++ A + E L++
Sbjct: 1119 --RRVTFLYKLEDGVAEGSFGMHCAAMCGINNRIIERAEVAAREWEHTSRLKESLEKAKT 1176
Query: 504 --------IHKFASLVKSGEKV-DVEELQKALESV 529
+ ASL++ E+V +V+ L +A+E++
Sbjct: 1177 GCYIPLGMLSDVASLLRDEEEVGNVDVLLRAVEAM 1211
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/66 (28%), Positives = 37/66 (56%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
P++ E L Y++ AFD +A + +P+ G+++++DE D I I+K++ L + A
Sbjct: 759 MPNLDEPLSYWKTAFDRMKAKNDRMFLPERGIEEDFDESQDRIAEIKKDLGKLLEKKKAE 818
Query: 339 FGCTVI 344
C +
Sbjct: 819 LKCKTL 824
>gi|290999909|ref|XP_002682522.1| DNA mismatch repair protein msh6 [Naegleria gruberi]
gi|284096149|gb|EFC49778.1| DNA mismatch repair protein msh6 [Naegleria gruberi]
Length = 1998
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 64/108 (59%), Gaps = 4/108 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKR 446
RGT T+DG IA ++ +++ +GCL +F+THY+ + L+ P++ F M +E
Sbjct: 1821 RGTSTHDGYAIAN-SVAQYMADVVGCLCMFSTHYYELTEELKHHPSIDFYQMECEVEKDE 1879
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
I ++FLY+ G+C KS+G VA+ AG+P+ +V + VA + E
Sbjct: 1880 TGRITDVIFLYQFARGVCEKSYGIQVAKKAGVPQSIVDRASVVAEEFE 1927
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 28/69 (40%), Positives = 37/69 (53%)
Query: 179 LDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHM 238
LD RR PD++ TLY+ + TP Q+W K + D ++FFK GKFYEL+
Sbjct: 1046 LDDKRRPESDPDFDKSTLYISTGDMSNLTPMEQQYWATKKNHMDKLVFFKKGKFYELYEE 1105
Query: 239 DAVIGADEL 247
DA I E
Sbjct: 1106 DADIAKKEF 1114
>gi|367031666|ref|XP_003665116.1| hypothetical protein MYCTH_2308482 [Myceliophthora thermophila ATCC
42464]
gi|347012387|gb|AEO59871.1| hypothetical protein MYCTH_2308482 [Myceliophthora thermophila ATCC
42464]
Length = 1210
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 51/163 (31%), Positives = 73/163 (44%), Gaps = 42/163 (25%)
Query: 120 KRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETT---PSTSGAQDWSHN-------- 168
KRG +G P KK L++ +P S D E PSTS AQ W ++
Sbjct: 203 KRGAVKPTG-PRKKANLSSSPSPDMRSPSAVDDEEMLDIPPSTSTAQKWKYDPDSIGPSE 261
Query: 169 ----------------------------HYQFLHPDHILDADRRSPKHPDYNPKTLYVPP 200
Y +L +ILD ++ P HPD++P ++Y+PP
Sbjct: 262 PASRAVPPTQKPSGPKPKPKAHTKEPEERYPWLA--NILDGNKNPPGHPDFDPTSIYIPP 319
Query: 201 EFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
+ +P Q+W IK +D ++FFK GKFYEL+ DA IG
Sbjct: 320 MAERGFSPFEKQYWDIKKNLWDTIVFFKKGKFYELYENDATIG 362
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 60/216 (27%), Positives = 91/216 (42%), Gaps = 28/216 (12%)
Query: 330 TYLRTQC-----AHFGCTVIYSEAQKKQKKYVLEVPSKYASK-----AKSNHQRVATKKK 379
T LR C A GC V S A+ ++ S+ + A+S ++ K
Sbjct: 980 TILRMSCIAVIMAQIGCYVPASSARLTPIDRIM---SRLGANDNIFAAQSTFFVELSETK 1036
Query: 380 NVENYVTPEC--------RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLRE 430
+ + TP RGT + DG +A+ L IGC+ FATHYHS+A
Sbjct: 1037 KILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVASHIGCVGFFATHYHSLAAEFAH 1096
Query: 431 EPNVAFEYMSY-IEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTV 489
P V M ++++R + FLY+L G+ SFG + A + GIP V++
Sbjct: 1097 HPEVRARRMQIDVDEERK----RVTFLYRLEDGVAEGSFGMHCAAMCGIPGRVIERAEVA 1152
Query: 490 AFQMEARHNLRQ-LFIHKFASLVKSGEKVDVEELQK 524
A E L++ L K + G + DV L +
Sbjct: 1153 ARAWEHTSRLKESLEQAKLGCYIPLGVQSDVASLLR 1188
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/83 (30%), Positives = 47/83 (56%), Gaps = 3/83 (3%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
P++ E L Y+E AFD ++A +IP+ G+++++D ++E+ I E+ L Q
Sbjct: 754 MPNLKEPLGYWETAFDRRKARDEKLLIPEKGIEEDFDNSLNELDRIRDELHALLERQKTA 813
Query: 339 FGC-TVIYSEAQKKQKKYVLEVP 360
C T+ +++ K+ Y +EVP
Sbjct: 814 LKCKTLKFTDVGKEI--YQIEVP 834
>gi|254578938|ref|XP_002495455.1| ZYRO0B11792p [Zygosaccharomyces rouxii]
gi|238938345|emb|CAR26522.1| ZYRO0B11792p [Zygosaccharomyces rouxii]
Length = 1210
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 55/171 (32%), Positives = 79/171 (46%), Gaps = 15/171 (8%)
Query: 73 EDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTK 132
ED YVP K + E ES+ E ++ + E+ + K + K PT+
Sbjct: 165 EDTYVP-KDQSEEESDFIDDGIEENNDNDNNDDDDDDDEILSLAKKPKAKVEVKRA-PTR 222
Query: 133 KPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYN 192
P P S+P P S + YQ+L + DA RR P+Y+
Sbjct: 223 LPPKKPPVKSSSP-----------PKHSAFNKQNEERYQWLV--DVRDAQRRPKDDPEYD 269
Query: 193 PKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
P+TLY+P K TP Q+W IKS +DC++FFK GKF+EL+ DA +
Sbjct: 270 PRTLYIPSSAWSKFTPFEKQYWEIKSSMWDCIVFFKKGKFFELYEKDAALA 320
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 76/157 (48%), Gaps = 11/157 (7%)
Query: 235 LFHMDAVIGADELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFD 294
+ + D VI E+ ++E L L Y S PS F D+ + NAFD
Sbjct: 685 VMNFDKVIQGFEVITKLIRE---LTNYELRGSLATYVSSVPSSMFEDVDN----WSNAFD 737
Query: 295 HKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQK 353
+A + G +IP GV+ E+DE +D+IK +E E+ LRT F C +V Y ++ K+
Sbjct: 738 RTKAVTEGILIPHRGVEPEFDESLDKIKELENELDDLLRTYKKQFKCSSVQYKDSGKEI- 796
Query: 354 KYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
Y++EVP S+ ++ KN + Y + E +
Sbjct: 797 -YLIEVPISATKHVPSDWMQMGA-NKNFKRYYSDEVK 831
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 45/173 (26%), Positives = 71/173 (41%), Gaps = 17/173 (9%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L L FATHY ++ + M + D +
Sbjct: 1037 RGGSSSDGFAIAEAVLHHAATHTQSLGFFATHYATLGHSFENHSMIRPLRMGILVD---E 1093
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL---RQLFIH 505
+ FLYKL G SFG +VA + GIP++VV A +E L R+L
Sbjct: 1094 NTRKVTFLYKLEEGQSEGSFGMHVASMCGIPKEVVDNAQVAADTLEHTSKLIKERKLAHE 1153
Query: 506 KFASLVKSGEKVDVEELQ----------KALESVKSFESQTKKDLEDLPGGVA 548
+ L+ G + D L E+V ++S K+++ ++ G+
Sbjct: 1154 EMKGLIPLGLQSDFARLAFGGGLNNDRLSTGENVLVYDSNIKRNVLNIIFGIV 1206
>gi|322699711|gb|EFY91470.1| DNA mismatch repair protein msh6 [Metarhizium acridum CQMa 102]
Length = 1220
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 47/71 (66%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+I D ++R+P P+Y+P+T+Y+PP K +P Q+W IK +D ++FFK GKFYEL+
Sbjct: 307 NIRDKEKRAPSDPEYDPRTIYIPPMAWNKFSPFEKQYWEIKQNLWDTIVFFKKGKFYELY 366
Query: 237 HMDAVIGADEL 247
DA IG E
Sbjct: 367 ENDATIGHQEF 377
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IGC+ FATHYHS+A P + M D D
Sbjct: 1067 RGTSSYDGVAVAQAVLHHVATHIGCVGFFATHYHSLATEFENHPEIRARRMQIHVD---D 1123
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLYKL G+ SFG + A + GI + V++ A E L++
Sbjct: 1124 AERKVTFLYKLEDGVAEGSFGMHCAAMCGISDRVIERAEVAARDWEHTSRLKE 1176
Score = 42.4 bits (98), Expect = 0.61, Method: Compositional matrix adjust.
Identities = 28/111 (25%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
P++ E L Y++ AFD ++A +IP G++ ++D+ +++++ I+ ++ L +
Sbjct: 766 MPNLEEPLTYWKTAFDRRKAREDKILIPARGIEPDFDDSLNQMEEIKDQLNDLLSEKKGE 825
Query: 339 FGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPE 388
C T+ +++ K + Y +E P K S Q AT K+V+ + P+
Sbjct: 826 LKCRTLKFTDVGK--EIYQIETP-KSVKVPSSWRQMSAT--KDVKRWYFPQ 871
>gi|366999412|ref|XP_003684442.1| hypothetical protein TPHA_0B03370 [Tetrapisispora phaffii CBS 4417]
gi|357522738|emb|CCE62008.1| hypothetical protein TPHA_0B03370 [Tetrapisispora phaffii CBS 4417]
Length = 1144
Score = 77.4 bits (189), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 2/94 (2%)
Query: 150 SDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPC 209
S T P + YQ+L I DA++R P+Y+PKTLY+P K T
Sbjct: 159 SKTFAQAPKHANFNKQHQERYQWLID--IRDAEKRPMTDPEYDPKTLYIPTSAWNKFTAF 216
Query: 210 MGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
Q+W IKS+ +DCV+FFK GKF+EL+ DA++G
Sbjct: 217 EKQYWEIKSKMWDCVVFFKKGKFFELYEKDAILG 250
Score = 58.5 bits (140), Expect = 9e-06, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG +NDG IA L I ++ FATHY ++ + P+V M+ + D++
Sbjct: 969 RGGSSNDGFAIAECVLYHLATHIQSMSFFATHYAALGLNFKGHPDVRPMKMNILVDEQTR 1028
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
I FLY+LV G KSFG +VA + GI + +V
Sbjct: 1029 NI---TFLYQLVNGESGKSFGMHVASMCGISKTIV 1060
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 31/92 (33%), Positives = 47/92 (51%), Gaps = 7/92 (7%)
Query: 270 YESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQ 329
Y SQ P D+ + + N+FD A IIP GV+ E+DE +++IK IE E+
Sbjct: 649 YISQIP----VDLRSSVDKWSNSFDRACAIEEDKIIPIKGVEPEFDESLNQIKVIEDELN 704
Query: 330 TYLRTQCAHFGCTVI-YSEAQKKQKKYVLEVP 360
L F C+ I Y ++ K+ + +EVP
Sbjct: 705 KILLEYRKRFKCSSIQYKDSGKEL--FTIEVP 734
>gi|336110076|gb|AEI16806.1| mutS protein 6 [Uma scoparia]
Length = 324
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 29/42 (69%), Positives = 37/42 (88%)
Query: 212 QWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
+WW +KSQNFDCV+F+KVGKFYEL+HMDAVIG ++L +MK
Sbjct: 1 KWWELKSQNFDCVIFYKVGKFYELYHMDAVIGVNKLGLVFMK 42
>gi|350632200|gb|EHA20568.1| hypothetical protein ASPNIDRAFT_50490 [Aspergillus niger ATCC 1015]
Length = 1188
Score = 77.0 bits (188), Expect = 2e-11, Method: Compositional matrix adjust.
Identities = 69/244 (28%), Positives = 109/244 (44%), Gaps = 32/244 (13%)
Query: 14 DSESSTPASSKGKKTSKSPAKSEDDSPVTKRPRRKSA---KRVKSAIQSDSEP------D 64
D + + K +S ++ EDD RP R S +++ + ++ + P D
Sbjct: 104 DEQEDNAQAKKQVNYVESDSEGEDDDEKIFRPGRNSRNKRRKILTMVEMSATPMMVLEMD 163
Query: 65 DMLQDNGSEDEYVPPKAEVESESEHSSGEEEL-----EESVEDPTPSSSEAEVTPMKNGN 119
D + + S++E P K ++ S L EE ++ P +S
Sbjct: 164 DFIVADDSDEEAKPSKKRKRPSTQPKSKSLSLPPVSFEEDLDMDIPDASAG------TAL 217
Query: 120 KRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHIL 179
K +S +P ++P+ +TP TP T + T Q Y +L +I
Sbjct: 218 KWTYDPESSEP-RQPR----TTPVTPKKSSGTTKQKAHVTEPEQ-----RYAWLA--NIR 265
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
D D HP+Y+P+TLY+PP K +P Q+W IK + +D V+FFK GKFYEL+ D
Sbjct: 266 DIDGHPIGHPEYDPRTLYIPPLAWTKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYEND 325
Query: 240 AVIG 243
A IG
Sbjct: 326 ATIG 329
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/146 (34%), Positives = 80/146 (54%), Gaps = 14/146 (9%)
Query: 246 ELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNII 305
E S +KESG GE + Q SG PD++ELL+Y++ AFD +A G ++
Sbjct: 701 EYTMSLLKESGSAGEGVI--------GQLISG-MPDLNELLEYWKTAFDRSKARENGILV 751
Query: 306 PKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCT-VIYSEAQKKQKKYVLEVPSKYA 364
PK GV++++D + I+ I +++++ L+ G + +IY + K + Y LEVP K
Sbjct: 752 PKPGVEEDFDSSQENIEQIHRDLESLLKRVRKELGSSAIIYKDNGK--EIYQLEVPIKVK 809
Query: 365 SKAKSNHQRVATKKKNVENYVTPECR 390
+ K+ Q ATK+ V+ Y PE R
Sbjct: 810 NIPKNWDQMSATKQ--VKRYYFPELR 833
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/133 (34%), Positives = 66/133 (49%), Gaps = 7/133 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT + DG +A+ L IG L FATHYHS+A P +A + M +++D+
Sbjct: 1027 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLAAEFEGHPEIAPKRMRIHVDDEER 1086
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ-LFIHK 506
+ FLYKL G+ SFG + A + GIP+ V++ A Q E L++ L K
Sbjct: 1087 ----RVTFLYKLEDGVAEGSFGMHCAAMCGIPDKVIERAEVAAKQWEHTSRLKESLERRK 1142
Query: 507 FASLVKSGEKVDV 519
LV G D+
Sbjct: 1143 GGGLVGMGWWSDI 1155
>gi|308198192|ref|XP_001387139.2| Mismatch repair ATPase MSH6 (MutS family) [Scheffersomyces stipitis
CBS 6054]
gi|149389076|gb|EAZ63116.2| Mismatch repair ATPase MSH6 (MutS family) [Scheffersomyces stipitis
CBS 6054]
Length = 1212
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 69/128 (53%), Gaps = 16/128 (12%)
Query: 120 KRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHIL 179
K G S K+ QP KPK P +TTP + +++ + YQ+L +
Sbjct: 245 KAGSSYKATQPATKPKSITPV-------------KTTPKKNFSKE-NEERYQWLV--DVR 288
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
DA++R+ P+Y+P+TL+VP K T Q+W IKS+ ++ V+FFK GKFYEL+ D
Sbjct: 289 DAEKRTTDDPNYDPRTLHVPQSAWSKFTAFEKQYWEIKSKMYNTVVFFKKGKFYELYEND 348
Query: 240 AVIGADEL 247
A I E
Sbjct: 349 ATIANTEF 356
Score = 61.2 bits (147), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 55/122 (45%), Gaps = 6/122 (4%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA TL I L FA HY ++ + P + M+ I D +
Sbjct: 1051 RGGSSSDGFAIAESTLHHLATHIQPLGFFAIHYGTLGLSFQNHPQIKPLRMAIIIDNNSR 1110
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
I FLYKL G P SFG NVA + GI +V A + E L++ HK
Sbjct: 1111 NI---TFLYKLEEGTAPGSFGMNVASMCGIANTIVDSAEVAAKEYEQTSKLKK--THKNN 1165
Query: 509 SL 510
SL
Sbjct: 1166 SL 1167
Score = 52.4 bits (124), Expect = 6e-04, Method: Compositional matrix adjust.
Identities = 36/120 (30%), Positives = 71/120 (59%), Gaps = 12/120 (10%)
Query: 279 FP-DMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYL----R 333
FP ++ EL+ +++AFD +EA ++P GVD E+D+ ++K +E +++ YL R
Sbjct: 749 FPRELPELVSQWDDAFDREEAKK-DVVVPTEGVDAEFDDSQCKMKILEDKLEQYLKEYKR 807
Query: 334 TQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRGTG 393
T +H V+Y ++ K+ Y++E+P+K + ++ Q++ + K V+ Y +PE + T
Sbjct: 808 TYKSH---EVVYRDSGKEI--YLIELPNKLVKQVPNDWQQMGSTSK-VKRYWSPEVKRTA 861
>gi|317121911|ref|YP_004101914.1| DNA mismatch repair protein MutS [Thermaerobacter marianensis DSM
12885]
gi|315591891|gb|ADU51187.1| DNA mismatch repair protein MutS [Thermaerobacter marianensis DSM
12885]
Length = 1087
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 40/121 (33%), Positives = 65/121 (53%), Gaps = 6/121 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IAR +E +IG T+ +THYH + P + + +E+
Sbjct: 818 RGTSTFDGIAIARAVIEYVHDRIGARTLVSTHYHELTGLAATRPGIRNYHARVVEEG--- 874
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
DT+ FL+++VPG +S+G NVA LAG+P ++V+ + +++ R RQL +
Sbjct: 875 --DTVRFLWRIVPGGADRSYGINVARLAGLPVEIVERAKAILAELDRRSGPRQLSLADLM 932
Query: 509 S 509
+
Sbjct: 933 A 933
Score = 47.0 bits (110), Expect = 0.029, Method: Compositional matrix adjust.
Identities = 21/58 (36%), Positives = 31/58 (53%)
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGEST 262
++TP M Q+ K + DC+LFF++G FYE+F DA + A L + GE
Sbjct: 36 RETPMMRQYREWKERYPDCILFFRLGDFYEMFGDDARLAARILDITLTSRETAKGERV 93
>gi|1588283|prf||2208298A MSH6 gene
Length = 1242
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 67/213 (31%), Positives = 97/213 (45%), Gaps = 37/213 (17%)
Query: 49 SAKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEE----ELEESVEDPT 104
+AKR K + DSE D EDEY+P K + + + + + +E EL E D
Sbjct: 155 TAKRKKGKV-VDSESD--------EDEYLPDKNDGDEDDDIADDKEDIKGELAEDSGDDD 205
Query: 105 PSSSEAEVT--------------PMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVS 150
S AE T P R S K +P + P + + S PS
Sbjct: 206 DLISLAETTSKKKFSYNTSHSSSPFTRNISRDNSKKKSRPNQAPSRSYNPSHSQPS---- 261
Query: 151 DTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCM 210
T +S + YQ+L + DA RR P+Y+P+TLY+P K TP
Sbjct: 262 ----ATSKSSKFNKQNEERYQWLVDER--DAQRRPKSDPEYDPRTLYIPSSAWNKFTPFE 315
Query: 211 GQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
Q+W IKS+ +DC++FFK GK +EL+ DA++
Sbjct: 316 KQYWEIKSKMWDCIVFFKKGKEFELYEKDALLA 348
Score = 58.9 bits (141), Expect = 8e-06, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 61/131 (46%), Gaps = 6/131 (4%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L I L FATHY ++A + P V MS + D +
Sbjct: 1065 RGGSSSDGFAIAESVLHHVATHIQSLGFFATHYGTLASSFKHHPQVRPLKMSILVD---E 1121
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
+ FLYK++ G SFG +VA + GI ++++ A +E H R + A
Sbjct: 1122 ATRNVTFLYKMLEGQSEGSFGMHVASMCGISKEIIDNAQIAADNLE--HTSRLVKERDLA 1179
Query: 509 SLVKSGEKVDV 519
+ +GE V V
Sbjct: 1180 ANNLNGEVVSV 1190
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 46/158 (29%), Positives = 78/158 (49%), Gaps = 11/158 (6%)
Query: 270 YESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQ 329
Y S P G + E +K + NAF+ ++A + I+P+ G D E+D+ MD I+ +E E+
Sbjct: 745 YISSFPEG----LVEAVKSWTNAFERQKAINENIIVPQRGFDIEFDKSMDRIQELEDELM 800
Query: 330 TYLRTQCAHFGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPE 388
L T F C+ I Y ++ K + Y +E+P SN ++A K + Y + E
Sbjct: 801 EILMTYRKQFKCSNIQYKDSGK--EIYTIEIPISATKNVPSNWVQMAA-NKTYKRYYSDE 857
Query: 389 CRGTGTN--DGCVIARVTLEKFLQIGCLTVFATHYHSV 424
R + + I + TLE+ L+ F HY+++
Sbjct: 858 VRALARSMAEAKEIHK-TLEEDLKNRLCQKFDAHYNTI 894
>gi|367048143|ref|XP_003654451.1| hypothetical protein THITE_2117497 [Thielavia terrestris NRRL 8126]
gi|347001714|gb|AEO68115.1| hypothetical protein THITE_2117497 [Thielavia terrestris NRRL 8126]
Length = 1231
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 73/281 (25%), Positives = 120/281 (42%), Gaps = 47/281 (16%)
Query: 8 SPEKKGDSESSTPASSKGKKTSKSPAKSEDDSPVTKRPRRKS-----AKRVKSAIQSDSE 62
S ++ D+ ++ AS + +PAK PV+ +P S AK+V + +S E
Sbjct: 102 SSQENRDASTTKVASLTRLSPAATPAKIVKKQPVSAKPSLHSSPSRKAKKVVNYAESSDE 161
Query: 63 PDDML--QDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNK 120
DD + +A V E + + ++E + + +D S+ P K+ +
Sbjct: 162 DDDAIFAALKPRRSRQRRSRAAVSDEEDEDTYQDEADNAEDDDDFVVSDDSDAPSKSKKR 221
Query: 121 RGLSSKSGQPTKKPKLTAPSTPSTPSFPVSD---TSETTPSTSGAQDWSHNHYQFLHPD- 176
+ S+ P KK L++ P P P D + PSTS AQ W ++ +HP
Sbjct: 222 KRPPSRPTAPRKKSNLSSSPGPDLP-VPADDDEIMEDIPPSTSTAQKWKYDPDN-VHPSG 279
Query: 177 ----------------------------------HILDADRRSPKHPDYNPKTLYVPPEF 202
+ILD ++ P HPD++P ++Y+PP
Sbjct: 280 PTSRVPPPAQKSTGPKPKPKPHSKEPEERYPWLANILDGNKNPPGHPDFDPTSIYIPPSA 339
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
+ + Q+W IK +D ++FFK GKFYEL+ DA IG
Sbjct: 340 ERGFSAFEKQYWDIKKNLWDTIVFFKKGKFYELYENDATIG 380
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/113 (34%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IGC+ FATHYHS+A P V M D+R
Sbjct: 1073 RGTSSYDGVAVAQAVLHHVASHIGCVGFFATHYHSLAAEFAHHPEVRARRMQIRVDERE- 1131
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLY+L G+ SFG + A + GIP V+ A + E L++
Sbjct: 1132 --RRVTFLYRLEDGVAEGSFGMHCAAMCGIPRRVIDRAEVAAREWEHTSRLKE 1182
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 27/83 (32%), Positives = 48/83 (57%), Gaps = 3/83 (3%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
P++ E L Y+E AFD ++A + +IP+ GV++++D DE+ I+ E+ L Q
Sbjct: 772 MPNLKEPLGYWETAFDRRKARDSKLLIPERGVEEDFDRSQDELARIKDELHALLERQKTA 831
Query: 339 FGC-TVIYSEAQKKQKKYVLEVP 360
C T+ +++ K + Y +EVP
Sbjct: 832 LKCKTLKFTDVGK--EIYQIEVP 852
>gi|344302169|gb|EGW32474.1| mismatch repair ATPase MSH6 [Spathaspora passalidarum NRRL Y-27907]
Length = 1223
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 49/130 (37%), Positives = 73/130 (56%), Gaps = 8/130 (6%)
Query: 124 SSKSGQPTKKP---KLTAPSTPSTPSF-PV--SDTSETTPSTSGAQDWSHNHYQFLHPDH 177
++KS PTK+ K A S S ++ PV S +++ TP + YQ+L +
Sbjct: 234 ATKSMTPTKRALDKKFNAKSAYSPSNYTPVKSSPSTKVTPVKKSFAKENEERYQWLV--N 291
Query: 178 ILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFH 237
I DA++R+P P+Y+ +TLY+P K T Q+W IKS+ + V+FFK GKFYEL+
Sbjct: 292 IKDAEKRTPDDPEYDSRTLYIPQAAWSKFTAFEKQYWEIKSKMWTTVVFFKKGKFYELYE 351
Query: 238 MDAVIGADEL 247
DA+I E
Sbjct: 352 NDAIIANTEF 361
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 33/95 (34%), Positives = 44/95 (46%), Gaps = 4/95 (4%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L + L FATHY ++ + P + M I D
Sbjct: 1057 RGGSSSDGFAIAEAVLYHLATHLQSLGFFATHYGTLGASFKTHPQIKPLRMGIIVDSNTR 1116
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
I FLYKL G SFG NVA + GI +++V
Sbjct: 1117 ---NITFLYKLEEGAASGSFGMNVASMCGISDEIV 1148
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 30/114 (26%), Positives = 63/114 (55%), Gaps = 6/114 (5%)
Query: 279 FP-DMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCA 337
FP +++ L+ +E+AFD ++A + IIP G+D+++DE I ++ ++ +L+
Sbjct: 755 FPQEIARLITEWEDAFDREQAKN-DVIIPAKGIDEQFDESQAIIDDLQGQLDQHLKEYKK 813
Query: 338 HFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
F + Y ++ K+ Y++E P K + ++ Q++ K V+ + +PE R
Sbjct: 814 RFKSHEICYRDSGKEI--YLIEFPVKLVKQIPNDWQQMGATSK-VKRFWSPEVR 864
>gi|336109946|gb|AEI16741.1| mutS protein 6 [Aspidites melanocephalus]
Length = 324
Score = 77.0 bits (188), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 31/49 (63%), Positives = 39/49 (79%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
TP M +WW KSQNFD V+F+KVGKFYEL+HMDAV+G ++L +MK S
Sbjct: 1 TPGMRKWWEXKSQNFDAVIFYKVGKFYELYHMDAVVGVNKLGLVFMKGS 49
>gi|389641339|ref|XP_003718302.1| DNA mismatch repair protein msh6 [Magnaporthe oryzae 70-15]
gi|351640855|gb|EHA48718.1| DNA mismatch repair protein msh6 [Magnaporthe oryzae 70-15]
gi|440466802|gb|ELQ36046.1| DNA mismatch repair protein msh6 [Magnaporthe oryzae Y34]
gi|440480286|gb|ELQ60960.1| DNA mismatch repair protein msh6 [Magnaporthe oryzae P131]
Length = 1218
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 33/66 (50%), Positives = 44/66 (66%)
Query: 178 ILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFH 237
I D DR SP HPD++ T+++PP K +P Q+W IK + +D V+FFK GKFYEL+
Sbjct: 299 IQDMDRHSPDHPDFDKSTIFIPPMAWNKFSPFEKQYWEIKQKLWDTVVFFKKGKFYELYE 358
Query: 238 MDAVIG 243
DA IG
Sbjct: 359 NDATIG 364
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/113 (32%), Positives = 55/113 (48%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IGC+ FATHYHS+A P + + M D D
Sbjct: 1061 RGTSSYDGVAVAQAVLHHVASHIGCVGFFATHYHSLATEFENHPEIRAKRMQIQVD---D 1117
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLY+L G+ SFG + A + GI + V++ A + E L++
Sbjct: 1118 AKRRVTFLYRLEDGVAEGSFGMHCAAMCGISDRVIERAEVAAKEWEHTSRLKE 1170
Score = 47.8 bits (112), Expect = 0.016, Method: Compositional matrix adjust.
Identities = 21/61 (34%), Positives = 38/61 (62%)
Query: 281 DMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFG 340
D+ E L ++++AFD K+ +IP+ G+++++DE D I I+K++Q+ L Q A
Sbjct: 762 DLKEPLTFWKSAFDRKKVRDEKLLIPERGIEEDFDESADNIVRIKKDLQSLLDKQKAALK 821
Query: 341 C 341
C
Sbjct: 822 C 822
>gi|66827461|ref|XP_647085.1| hypothetical protein DDB_G0268614 [Dictyostelium discoideum AX4]
gi|74897500|sp|Q55GU9.1|MSH6_DICDI RecName: Full=DNA mismatch repair protein Msh6
gi|60475825|gb|EAL73760.1| hypothetical protein DDB_G0268614 [Dictyostelium discoideum AX4]
Length = 1260
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 38/79 (48%), Positives = 51/79 (64%), Gaps = 2/79 (2%)
Query: 169 HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFK 228
Y FL +I DA+ HPDY+ +TL++P L K +P Q+W IKS+N+D V+FFK
Sbjct: 325 RYSFLV--NIKDANGNPKDHPDYDKRTLHIPASCLSKFSPFERQFWDIKSKNYDTVVFFK 382
Query: 229 VGKFYELFHMDAVIGADEL 247
GKFYEL+ DA IG +L
Sbjct: 383 KGKFYELYESDADIGHQQL 401
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 53/152 (34%), Positives = 75/152 (49%), Gaps = 6/152 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L ++ + +FATHY S+A ++ YM+ D+
Sbjct: 1110 RGTSTFDGYSIAYSVLNYLATKVQSMCIFATHYQSLAYEPTVRDLISTAYMTCHVDEE-- 1167
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
++FLYKL G+CP S+G +VA +AG+P +++ + QME L FIH
Sbjct: 1168 -AKKVIFLYKLASGVCPNSYGLHVASMAGLPREIITKAEEKSTQMEKDSVLVS-FIHGTI 1225
Query: 509 SLVKSGEKVDVEELQKALESVKSFESQTKKDL 540
S K EK+ QK L + S T KDL
Sbjct: 1226 SRSKLVEKIVQSYKQKDLNQLIQL-SNTLKDL 1256
Score = 38.9 bits (89), Expect = 7.7, Method: Compositional matrix adjust.
Identities = 19/63 (30%), Positives = 34/63 (53%), Gaps = 1/63 (1%)
Query: 304 IIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKY 363
++P G+ E+D+ + I+S+E+ +L Q AHF C I + K+ Y +E+P +
Sbjct: 828 VVPSKGLFLEFDQCLGNIQSLEQSFAKHLEEQKAHFKCNKIEYKHMGKE-IYQIEIPVAF 886
Query: 364 ASK 366
K
Sbjct: 887 TKK 889
>gi|145539700|ref|XP_001455540.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124423348|emb|CAK88143.1| unnamed protein product [Paramecium tetraurelia]
Length = 1106
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 37/83 (44%), Positives = 48/83 (57%), Gaps = 2/83 (2%)
Query: 179 LDADRRSPKH--PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
L D+ H D +P TL +P K T CM Q+W KS+NFD ++FFK+GKFYELF
Sbjct: 199 LSRDKSGKLHGTSDADPTTLLIPQSDFNKLTKCMQQYWKYKSENFDKIIFFKLGKFYELF 258
Query: 237 HMDAVIGADELACSYMKESGCTG 259
+ DA IG L ++M TG
Sbjct: 259 YEDAYIGNKYLDLNWMGRKMHTG 281
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/134 (31%), Positives = 69/134 (51%), Gaps = 12/134 (8%)
Query: 384 YVTPEC-RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS- 440
++T E RGT T DG IA + ++ I C +FATH+ + + V +M+
Sbjct: 975 FITDELGRGTSTYDGVAIASAVMHYLIKTIQCRVLFATHFRILVEEAKLISEVTNVHMAC 1034
Query: 441 YIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA--FQMEARHN 498
YI+D + ++FLY+L G C SFG NVA++ GI ++ +A F+ + + N
Sbjct: 1035 YIQDGK------VIFLYRLKEGACEASFGINVAKVVGIENSIITRAEDMANFFENKVQKN 1088
Query: 499 LRQLFIHKFASLVK 512
Q + KF ++K
Sbjct: 1089 TEQT-LQKFNQIMK 1101
>gi|221633094|ref|YP_002522319.1| DNA mismatch repair protein MutS [Thermomicrobium roseum DSM 5159]
gi|221157200|gb|ACM06327.1| DNA mismatch repair protein MutS [Thermomicrobium roseum DSM 5159]
Length = 884
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 8/109 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL---QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG IAR +E ++GC T+FATHYH + R P V M +E+
Sbjct: 717 RGTSTYDGLAIARAVVEYLHNHPRLGCRTLFATHYHELTELERVLPRVRNYRMDVLEEG- 775
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
D +VFL+++V G KS+G +VA+LAG+P VV+ + ++E+
Sbjct: 776 ----DRVVFLHRVVRGGADKSYGIHVAQLAGLPHAVVRRAREILQELES 820
>gi|430813560|emb|CCJ29107.1| unnamed protein product [Pneumocystis jirovecii]
Length = 826
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 61/116 (52%), Gaps = 5/116 (4%)
Query: 128 GQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPK 187
G P+ PS+ FP ++ ET D + +Y FL P++ DAD
Sbjct: 204 GSPSINMSYEKPSS----EFPFNN-QETKQHFEDISDKNSENYMFLLPEYRRDADGNLSS 258
Query: 188 HPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
P+Y+ +TLY+PP K P Q+W IK + D V+FF+ GKFYEL+ +DA IG
Sbjct: 259 SPNYDERTLYIPPSAYKSFKPFEKQYWDIKCKFMDTVVFFQKGKFYELYQLDADIG 314
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 30/110 (27%), Positives = 57/110 (51%), Gaps = 4/110 (3%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
P++ +L ++ F+ ++ S +IP G++KE+D+ D+IK+IE E+ +
Sbjct: 706 IPNLVNILDEWQKIFNWQKCKSEDMLIPNPGIEKEFDDSQDKIKAIENELFQMEKDYKNQ 765
Query: 339 FGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPE 388
F I K+ Y LE+P + K S+ ++++ K+V Y +PE
Sbjct: 766 FKSPQITFRNIGKE-IYQLEIPK--SIKVPSSWIKLSS-TKSVNRYWSPE 811
>gi|297799442|ref|XP_002867605.1| hypothetical protein ARALYDRAFT_492273 [Arabidopsis lyrata subsp.
lyrata]
gi|297313441|gb|EFH43864.1| hypothetical protein ARALYDRAFT_492273 [Arabidopsis lyrata subsp.
lyrata]
Length = 1078
Score = 76.6 bits (187), Expect = 3e-11, Method: Compositional matrix adjust.
Identities = 44/117 (37%), Positives = 66/117 (56%), Gaps = 5/117 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLRE-EPNVAFEYMSYI-EDKR 446
RGT T+DG IA TL+ L + CL +F THY +A +V ++SY+ K+
Sbjct: 898 RGTSTHDGVAIAYATLQHLLLEKRCLVLFVTHYPEIAEISNGFRGSVGTYHVSYLTSQKK 957
Query: 447 NDGID--TIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
G D + +LYKLV G+C +SFGF VA+LA IP ++ ++ ++EA R+
Sbjct: 958 KSGFDHDDVTYLYKLVRGLCSRSFGFKVAQLAQIPSSCIRRAISMGAKLEAEVGARE 1014
>gi|260943291|ref|XP_002615944.1| hypothetical protein CLUG_04826 [Clavispora lusitaniae ATCC 42720]
gi|238851234|gb|EEQ40698.1| hypothetical protein CLUG_04826 [Clavispora lusitaniae ATCC 42720]
Length = 1320
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 37/79 (46%), Positives = 50/79 (63%), Gaps = 2/79 (2%)
Query: 169 HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFK 228
YQ+L +I DA++RSP P+Y+P+TLY+P K T Q+W IK + +D V+FFK
Sbjct: 386 RYQWLV--NIKDAEKRSPDDPNYDPRTLYIPSSAWTKFTAFEKQYWEIKGKMWDTVVFFK 443
Query: 229 VGKFYELFHMDAVIGADEL 247
GKFYEL+ DA I E
Sbjct: 444 KGKFYELYENDATIANTEF 462
Score = 60.8 bits (146), Expect = 2e-06, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 54/116 (46%), Gaps = 8/116 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDK--R 446
RG ++DG IA L + L FATHY S+ P + M + D+ R
Sbjct: 1157 RGGSSSDGYAIAESVLHHLASHVQPLGFFATHYGSLGLSFINHPQIRPLRMGIVVDQTSR 1216
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
N I FLYKL G P SFG NVA + GIP ++V+ A + E L+ +
Sbjct: 1217 N-----ITFLYKLEDGCAPGSFGMNVAAMCGIPTEIVEKAEGAAKEYEQTSKLKDM 1267
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 35/114 (30%), Positives = 64/114 (56%), Gaps = 7/114 (6%)
Query: 279 FP-DMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCA 337
FP ++ L++ +E+AFD +EA + ++P GVD E+DE M + S+E ++ +L+
Sbjct: 856 FPSELHNLIESWEDAFDRREALN-NIVVPATGVDVEFDESMATLNSLEGQLNEHLKAYKK 914
Query: 338 HFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
F + Y ++ K+ +++E+P K + K Q AT K V+ Y +PE +
Sbjct: 915 QFKSHEICYRDSGKEL--FLIEMPIKIKNIPKDWQQMAATSK--VKRYWSPEVK 964
>gi|71666642|ref|XP_820278.1| mismatch repair protein MSH3 [Trypanosoma cruzi strain CL Brener]
gi|70885616|gb|EAN98427.1| mismatch repair protein MSH3, putative [Trypanosoma cruzi]
Length = 942
Score = 76.6 bits (187), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 45/131 (34%), Positives = 68/131 (51%), Gaps = 8/131 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVA----RRLREEPNVAFEYMSYIEDK 445
RGT + DG +A TLE LQ G +F THY + E V+ YM + E++
Sbjct: 810 RGTSSFDGIAVAAATLEYLLQRGTTMLFVTHYSHLCEPYLHNTSEGKQVSCYYMGFSEEQ 869
Query: 446 RNDGIDT---IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
+G D +VF YK PG+ P SFG VA +AG+P DVV ++ +ME R ++ ++
Sbjct: 870 DEEGEDREPKLVFTYKPTPGVTPSSFGVRVARMAGLPHDVVAEAQRLS-EMEEREHMTRM 928
Query: 503 FIHKFASLVKS 513
+ + V +
Sbjct: 929 ALMRLRRFVNA 939
>gi|145345455|ref|XP_001417225.1| predicted protein [Ostreococcus lucimarinus CCE9901]
gi|144577452|gb|ABO95518.1| predicted protein [Ostreococcus lucimarinus CCE9901]
Length = 916
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 66/109 (60%), Gaps = 4/109 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIG-CLTVFATHYHSVARRLREE--PNVAFEYMSYIE-DK 445
RGT T+DG IA TLE ++ C T+F THY SVAR ++ + + A + SY+E +
Sbjct: 753 RGTSTHDGVAIAAATLEHLVRDAKCFTLFVTHYPSVARDVQAKYPTHCASCFTSYVELEG 812
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++ + I FLYKL PG+ +SFG NVA +A +P V++ A ++E
Sbjct: 813 SSEEMPRIQFLYKLTPGVAHRSFGLNVARMACLPPAVIQSAGVKASELE 861
>gi|46126343|ref|XP_387725.1| hypothetical protein FG07549.1 [Gibberella zeae PH-1]
Length = 1210
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+I+D +RR P P+Y+ +T+YVPP K +P Q+W IK +D ++FFK GKFYEL+
Sbjct: 298 NIMDKERRKPDDPEYDKRTIYVPPGAWNKFSPFETQYWKIKQNLWDTIVFFKKGKFYELY 357
Query: 237 HMDAVIGADEL 247
DA +G E
Sbjct: 358 ENDATVGHQEF 368
Score = 64.3 bits (155), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/108 (34%), Positives = 51/108 (47%), Gaps = 8/108 (7%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSY--IEDKR 446
RGT + DG +A+ L IGC+ FATHYHS+A P + M ED+R
Sbjct: 1057 RGTSSYDGVAVAQAVLHHVATHIGCVGYFATHYHSLATEFENHPEIRARRMQIHVDEDER 1116
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ F+YKL G+ SFG + A + GI V+ A + E
Sbjct: 1117 R-----VTFMYKLEDGVAEGSFGMHCAAMCGISSRVIDRAEVAAKEWE 1159
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/112 (29%), Positives = 57/112 (50%), Gaps = 6/112 (5%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD+ E L Y+ AFD +A +IP+ G++ ++D+ D I I+++++ L +
Sbjct: 756 MPDLDEPLSYWRTAFDRNKARDEKILIPERGIEDDFDQSSDRIDEIKQQLEDLLAEKKKE 815
Query: 339 FGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPEC 389
F C ++ ++ K + Y LE P K S Q AT K+V+ Y P+
Sbjct: 816 FKCKLLKFTHVGK--EIYQLEAP-KSVKVPSSFRQMSAT--KDVKRYYFPDL 862
>gi|50288573|ref|XP_446716.1| hypothetical protein [Candida glabrata CBS 138]
gi|49526024|emb|CAG59643.1| unnamed protein product [Candida glabrata]
Length = 1216
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 68/243 (27%), Positives = 107/243 (44%), Gaps = 37/243 (15%)
Query: 7 ESPEKKGDSESSTPASSKGKKTSKSPAK---SEDDSPVTKRPRRKSAKRVKSAIQSDSEP 63
ES E+ D T + +K S A+ SEDD V KR R + + D +
Sbjct: 114 ESTEQNDDDTKDTQTVGRVRKRVVSYAEESDSEDDITVKKRKR--------TPVSDDEDS 165
Query: 64 D---DMLQDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNK 120
D D + D ++D+Y K+ V S ++S +D + + + K
Sbjct: 166 DFKADAVSDADNDDDYKSDKSAVSSIGG-------FDDSDDDDILALTTNKYKKPKAAAP 218
Query: 121 RGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILD 180
+ + + P KPK T +T P + + YQ+L + D
Sbjct: 219 KKVVQRITPPAAKPKFTMATTG--------------PKNNTFNKQNEERYQWLVDER--D 262
Query: 181 ADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDA 240
A +R P+Y+P+TLY+P K TP Q+W IKS+ +DC++FFK GKF+EL+ DA
Sbjct: 263 AQKRPKDDPEYDPRTLYIPSSAWNKFTPFEKQYWEIKSKMWDCIVFFKKGKFFELYEKDA 322
Query: 241 VIG 243
+
Sbjct: 323 FLA 325
Score = 61.2 bits (147), Expect = 1e-06, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 50/106 (47%), Gaps = 4/106 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG +NDG IA L I L FATHY S+ R P + MS + D +
Sbjct: 1039 RGGSSNDGFSIAESVLHHVATHIQSLGFFATHYGSLGLSFRSHPQIKPMKMSILVD---E 1095
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ FLYKLV G SFG +VA + GI + +V + A +E
Sbjct: 1096 ATRNVTFLYKLVDGQSEGSFGMHVASMCGIAKSIVDNAQSAADNLE 1141
>gi|258564442|ref|XP_002582966.1| hypothetical protein UREG_07739 [Uncinocarpus reesii 1704]
gi|237908473|gb|EEP82874.1| hypothetical protein UREG_07739 [Uncinocarpus reesii 1704]
Length = 1123
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 50/147 (34%), Positives = 79/147 (53%), Gaps = 6/147 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFE--YMSYIEDKR 446
RGT T+DG IA+ L+ ++ I LT+F THY +++ R PN +M + E
Sbjct: 979 RGTSTHDGVAIAQAVLDYMVRNIRSLTLFITHYQNLSSLARTYPNGELRNVHMKFTEAG- 1037
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF-IH 505
NDG D I FLY++ G+ +S+G NVA LA +P V+ T + ++E R ++L I
Sbjct: 1038 NDGQD-ITFLYEVGEGVAHRSYGLNVARLANVPSSVIDVARTKSAELEERIKRKKLAGIA 1096
Query: 506 KFASLVKSGEKVDVEELQKALESVKSF 532
K + V G+K + + + L V+
Sbjct: 1097 KGITKVLEGDKGETGLMGRLLNEVEQL 1123
>gi|198417081|gb|ACH87842.1| MutS [Francisella noatunensis subsp. noatunensis]
Length = 776
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 11/97 (11%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEP---NVAFEYMSYIEDKR 446
RGT T DG +A+ EKF +IG LT+FATHY + + + P N+ FE Y
Sbjct: 671 RGTSTFDGLSLAKACAEKFAKIGALTLFATHYFELTELVNQYPNTKNIHFEAKEY----- 725
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
D I F++K+V G KS+G VA+LAGI +DV+
Sbjct: 726 ---KDNIYFMHKVVAGAAKKSYGIQVAKLAGISKDVL 759
>gi|195973744|gb|ACG63437.1| DNA mismatch repair protein MutS [Francisella noatunensis]
Length = 776
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 11/97 (11%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEP---NVAFEYMSYIEDKR 446
RGT T DG +A+ EKF +IG LT+FATHY + + + P N+ FE Y
Sbjct: 671 RGTSTFDGLSLAKACAEKFAKIGALTLFATHYFELTELVNQYPNTKNIHFEAKEY----- 725
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
D I F++K+V G KS+G VA+LAGI +DV+
Sbjct: 726 ---KDNIYFMHKVVAGAAKKSYGIQVAKLAGISKDVL 759
>gi|440636963|gb|ELR06882.1| hypothetical protein GMDG_08173 [Geomyces destructans 20631-21]
Length = 1123
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 49/76 (64%), Gaps = 2/76 (2%)
Query: 168 NHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFF 227
+ Y +L ++LD DR P HPDY+P+T+Y+PP + Q+W IK + ++ ++FF
Sbjct: 192 HRYTWLA--NLLDMDRNPPDHPDYDPRTVYIPPNAWTGFSAFEKQYWQIKQKFWNTIVFF 249
Query: 228 KVGKFYELFHMDAVIG 243
K GKFYEL+ DA IG
Sbjct: 250 KKGKFYELYENDATIG 265
Score = 65.5 bits (158), Expect = 7e-08, Method: Compositional matrix adjust.
Identities = 49/166 (29%), Positives = 70/166 (42%), Gaps = 25/166 (15%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L +G + FATHYHS+A P +A M+ D+
Sbjct: 968 RGTSSYDGVAVAQAVLHHVATHVGAIGFFATHYHSLAAEFAGHPEIAPRRMAINVDEAER 1027
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR-QLFIHKF 507
+ FLY+L G+ SFG + A + GIP VV+ A + E L L + K
Sbjct: 1028 ---RVTFLYRLEEGVAQGSFGMHCASMCGIPRKVVERAEVAAKEWEHTSRLTVGLEVAKR 1084
Query: 508 ASLVKSGEKVDVEELQKALESVKSFESQTKKDLEDLPGGVAGAGTE 553
+ V G + D+ + L GGV G G E
Sbjct: 1085 GTYVPLGWQSDIAWM--------------------LKGGVLGEGAE 1110
Score = 46.2 bits (108), Expect = 0.048, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 57/112 (50%), Gaps = 2/112 (1%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD+ L+Y++ AFD +A ++P+ G+++++D+ D I I++E+ + A
Sbjct: 665 MPDLVGPLEYWKTAFDRTKARDERLLVPERGIEEDFDDSEDRILGIKQELFGLKKEWAAK 724
Query: 339 FGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
G + + K+ Y LEVP K SKA + + K+ + Y PE +
Sbjct: 725 LGTKGVQFKDVGKE-IYQLEVPVK-NSKAVPKDWTMVSSTKSEKRYYFPELK 774
>gi|195973742|gb|ACG63436.1| DNA mismatch repair protein MutS [Francisella noatunensis]
Length = 776
Score = 76.3 bits (186), Expect = 4e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 56/97 (57%), Gaps = 11/97 (11%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEP---NVAFEYMSYIEDKR 446
RGT T DG +A+ EKF +IG LT+FATHY + + + P N+ FE Y
Sbjct: 671 RGTSTFDGLSLAKACAEKFAKIGALTLFATHYFELTELVNQYPNTKNIHFEAKEY----- 725
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
D I F++K+V G KS+G VA+LAGI +DV+
Sbjct: 726 ---KDNIYFMHKVVAGAAKKSYGIQVAKLAGISKDVL 759
>gi|448508881|ref|XP_003866016.1| Msh6 protein [Candida orthopsilosis Co 90-125]
gi|380350354|emb|CCG20576.1| Msh6 protein [Candida orthopsilosis Co 90-125]
Length = 1242
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 169 HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFK 228
YQ+L +I DA++R+P P+Y+P+TLY+P K T Q+W IKS+ ++ V+FFK
Sbjct: 305 RYQWLV--NIKDAEKRTPDDPNYDPRTLYIPQSAWSKFTAFEKQYWEIKSKMWNTVVFFK 362
Query: 229 VGKFYELFHMDAVIG 243
GKFYEL+ DAVI
Sbjct: 363 KGKFYELYENDAVIA 377
Score = 62.4 bits (150), Expect = 7e-07, Method: Compositional matrix adjust.
Identities = 36/115 (31%), Positives = 56/115 (48%), Gaps = 4/115 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L + + FATHY+++ + P + M+ + D+ +
Sbjct: 1077 RGGSSSDGFAIAEAVLHHLATHLQPVGFFATHYNTLGVSFKSHPQIKPMRMAIVVDQESR 1136
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
I FLYKL G P SFG NVA + GIP ++V A E +L++ +
Sbjct: 1137 DI---TFLYKLEDGTAPGSFGMNVALMCGIPREIVDNAEIAAKNYEQVSSLKRTY 1188
Score = 45.1 bits (105), Expect = 0.096, Method: Compositional matrix adjust.
Identities = 34/114 (29%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 279 FP-DMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCA 337
FP DM E + +E+AF+ ++A S IIP GVD E+DE I +E ++ L+
Sbjct: 775 FPQDMVEHISEWEDAFERQQALS-DVIIPAKGVDAEFDESQAVIDDLENQLNELLKGYKK 833
Query: 338 HFGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
F ++Y ++ K+ Y++E+P K + Q + K V+ + +PE +
Sbjct: 834 EFKSHEILYRDSGKEI--YLIELPVKLVKHVPQSWQTMGATSK-VKRFWSPEVK 884
>gi|358331875|dbj|GAA50639.1| DNA mismatch repair protein MSH6 [Clonorchis sinensis]
Length = 503
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 51/193 (26%), Positives = 87/193 (45%), Gaps = 27/193 (13%)
Query: 329 QTYLRTQCAHFGCTV--IYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVT 386
QT L AH GC + + + + S +S + + + T
Sbjct: 278 QTALLVILAHLGCRIPASFCRLTPVDRVFSRLGASDRLLAGESTFMVELAETAAILRHCT 337
Query: 387 PEC--------RGTGTNDGCVIARVTL--------EKFLQIGCLTVFATHYHSVARRL-- 428
P RGT T+DG +A L ++ + G T+F+THYHS+ +
Sbjct: 338 PHSLVLMDELGRGTSTHDGAALASAVLHYLANPGADQLIGQGPRTLFSTHYHSLVDEVAL 397
Query: 429 ----REEPNVAFEYMSYIEDKRND---GIDTIVFLYKLVPGICPKSFGFNVAELAGIPED 481
+ +M+ + +++++ G++ I FLYK +PG CPKS+GFN A LA +P++
Sbjct: 398 GGQQSAVARIGLGHMACMVEEQSEAEAGLENITFLYKFIPGACPKSYGFNAARLAHLPDE 457
Query: 482 VVKFGTTVAFQME 494
V++ G A + E
Sbjct: 458 VIQLGLAKAKEFE 470
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 61/184 (33%), Positives = 89/184 (48%), Gaps = 23/184 (12%)
Query: 258 TGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEV 317
T + LL L E+ G FPD+ + +F AFD ++A G I P+ GVD++YDE
Sbjct: 15 TDSAPLLRALTKLEAD--GGQFPDLRPKIVFFMKAFDAEKAKRDGRITPEPGVDEDYDEA 72
Query: 318 MDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATK 377
+ EI++I E+ TYL FG + Y + ++ LEVP S+ + Q V ++
Sbjct: 73 VREIQTINSELDTYLIACGKRFGIRLAYWGTGR--NRFQLEVPDCAVSRVPRDWQLV-SQ 129
Query: 378 KKNVENYVTPECRGTGTNDGCVIAR-----VTLEKFLQIGCLTVFA------THYHSVAR 426
+K V+ Y T E T G +IA +L LQ T+FA T +HS R
Sbjct: 130 RKGVKRYRTDE---TTELLGRLIAAEDRKDASLRNILQ----TIFASFSDHFTLWHSAMR 182
Query: 427 RLRE 430
L E
Sbjct: 183 CLAE 186
>gi|354544901|emb|CCE41626.1| hypothetical protein CPAR2_801760 [Candida parapsilosis]
Length = 1244
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 36/75 (48%), Positives = 51/75 (68%), Gaps = 2/75 (2%)
Query: 169 HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFK 228
YQ+L +I DA++RSP P+Y+P+TLY+P K T Q+W IKS+ ++ V+FFK
Sbjct: 307 RYQWLV--NIKDAEKRSPDDPNYDPRTLYIPQSAWSKFTAFEKQYWEIKSKMWNTVVFFK 364
Query: 229 VGKFYELFHMDAVIG 243
GKFYEL+ DA+I
Sbjct: 365 KGKFYELYENDAIIA 379
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 37/115 (32%), Positives = 59/115 (51%), Gaps = 4/115 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L + L FATHY++++ + P + M+ + D+ +
Sbjct: 1079 RGGSSSDGFAIAEAVLHHLATHLQPLGFFATHYNTLSVSFKSHPQIKPMRMAIVVDQESR 1138
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
I FLYKL G P SFG NVA + GIP+++V A + E +L++ +
Sbjct: 1139 DI---TFLYKLESGTAPGSFGMNVALMCGIPKEIVDNAEVAAKKYEQVSSLKRTY 1190
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 34/113 (30%), Positives = 56/113 (49%), Gaps = 4/113 (3%)
Query: 279 FP-DMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCA 337
FP DM E + +E+AFD ++A + IIP GVD E+D+ I +E ++ L+
Sbjct: 777 FPQDMVEHISEWEDAFDRQQAVN-DIIIPAKGVDAEFDKSQGVIDGLENQLNELLKGYKK 835
Query: 338 HFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
F I+ K+ Y++E+P K + Q + K V+ Y +PE +
Sbjct: 836 DFKSHEIFYRDSGKE-IYLIELPVKLVKHVPQSWQTMGATSK-VKRYWSPEVK 886
>gi|410074455|ref|XP_003954810.1| hypothetical protein KAFR_0A02370 [Kazachstania africana CBS 2517]
gi|372461392|emb|CCF55675.1| hypothetical protein KAFR_0A02370 [Kazachstania africana CBS 2517]
Length = 1206
Score = 76.3 bits (186), Expect = 5e-11, Method: Compositional matrix adjust.
Identities = 35/75 (46%), Positives = 50/75 (66%), Gaps = 2/75 (2%)
Query: 169 HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFK 228
YQ+L + DA R P P+Y+P+TL++P K TP Q+W IKS+ +DCV+FFK
Sbjct: 243 RYQWLVNET--DAQGRPPTDPEYDPRTLHIPSSAWNKFTPFERQYWEIKSKMWDCVVFFK 300
Query: 229 VGKFYELFHMDAVIG 243
GKF+EL+ DA++G
Sbjct: 301 KGKFFELYEKDALLG 315
Score = 59.7 bits (143), Expect = 4e-06, Method: Compositional matrix adjust.
Identities = 43/145 (29%), Positives = 67/145 (46%), Gaps = 10/145 (6%)
Query: 241 VIGADELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASS 300
VI E C +K ++ L L Y SQ PS + D+ + N FD +AS
Sbjct: 684 VIQGFEDICDLLK---TISKTELEGALKQYISQVPSSLYDDVEN----WTNVFDRYKASE 736
Query: 301 AGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVI-YSEAQKKQKKYVLEV 359
G IIP G++ ++D+ +D+IK +E E+ L F C+ I Y ++ K+ Y +EV
Sbjct: 737 EGIIIPHRGIEADFDKSLDDIKELENELDIILNEYRKKFKCSSINYKDSGKEI--YTIEV 794
Query: 360 PSKYASKAKSNHQRVATKKKNVENY 384
P+ SN ++ K Y
Sbjct: 795 PTMIVKSIPSNWIQMGANKSTKRYY 819
Score = 59.3 bits (142), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 39/108 (36%), Positives = 52/108 (48%), Gaps = 8/108 (7%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI--EDKR 446
RG ++DG IA L + L FATHY ++ +E P V MS I E+ R
Sbjct: 1030 RGGSSSDGFAIAESVLHHVATHVQSLGFFATHYGTLGSSFKEHPQVRPLRMSIIVDEETR 1089
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
N + FLYKL G SFG +VA + GIP+ +V A +E
Sbjct: 1090 N-----VTFLYKLEDGESEGSFGMHVASMCGIPKSIVDNAQVAADNLE 1132
>gi|398409676|ref|XP_003856303.1| hypothetical protein MYCGRDRAFT_98500 [Zymoseptoria tritici IPO323]
gi|339476188|gb|EGP91279.1| hypothetical protein MYCGRDRAFT_98500 [Zymoseptoria tritici IPO323]
Length = 1199
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/66 (48%), Positives = 42/66 (63%)
Query: 178 ILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFH 237
+LDADR H DY+P+T+Y+PP K + Q+W IK D ++FFK GKFYEL+
Sbjct: 279 VLDADRNPTDHADYDPRTIYIPPMAWNKFSAFEKQYWEIKQNFMDTIVFFKKGKFYELYE 338
Query: 238 MDAVIG 243
DA IG
Sbjct: 339 NDATIG 344
Score = 62.4 bits (150), Expect = 6e-07, Method: Compositional matrix adjust.
Identities = 31/95 (32%), Positives = 50/95 (52%), Gaps = 4/95 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L +G L FATHYHS+A + P +A + M+ +
Sbjct: 1042 RGTSSYDGVAVAQSVLHHIATHVGSLGYFATHYHSLAAEFQSHPEIAAKRMAV---RVEH 1098
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
I + FLY+L G+ S+G + A + GI + ++
Sbjct: 1099 DIRDVTFLYQLEDGVAEGSYGMHCAAMCGISDKII 1133
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 31/112 (27%), Positives = 59/112 (52%), Gaps = 2/112 (1%)
Query: 278 CFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCA 337
P+++ L+++++AFD +A G IP+ GV++++DE + I ++ KE+ L
Sbjct: 737 AMPNLAGALEHWKDAFDRTKAKDEGLFIPQPGVEEDFDESQEVIDNVLKELNKLLVKARK 796
Query: 338 HFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPEC 389
G + I K+ Y LEVP K K N ++++ K+ + + +PE
Sbjct: 797 DIGSSSIKFTDNGKE-IYQLEVPIKACGKIPKNWKQMSATKQ-CKRWYSPEL 846
>gi|260940443|ref|XP_002614521.1| hypothetical protein CLUG_05299 [Clavispora lusitaniae ATCC 42720]
gi|238851707|gb|EEQ41171.1| hypothetical protein CLUG_05299 [Clavispora lusitaniae ATCC 42720]
Length = 1002
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 66/107 (61%), Gaps = 6/107 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGC--LTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGTGT+DG +A L ++ LT+F TH+ S++ E +V +M+++E KRN
Sbjct: 861 RGTGTSDGISLAYAILRYIIEDKKKPLTLFITHFPSLSTLETEFNDVKNFHMAFVEKKRN 920
Query: 448 DGIDT----IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
+G ++ ++FLYKLV G+ S+G NVA+LAGI + +++ V+
Sbjct: 921 EGKESEWPEVIFLYKLVSGVVSNSYGLNVAKLAGIDDSIIQSAYNVS 967
>gi|111226571|ref|XP_001134558.1| hypothetical protein DDB_G0281683 [Dictyostelium discoideum AX4]
gi|121962480|sp|Q1ZXH0.1|MSH3_DICDI RecName: Full=DNA mismatch repair protein Msh3; AltName: Full=MutS
protein homolog 3
gi|90970653|gb|EAS66875.1| hypothetical protein DDB_G0281683 [Dictyostelium discoideum AX4]
Length = 1428
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 60/101 (59%), Gaps = 7/101 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI-GCLTVFATHYHSVARRLREEP-NVAFEYMSYIEDKRN 447
RGT TNDG IA TL+ +++ C +F THY +A+ + P V +M Y+E+K++
Sbjct: 1262 RGTSTNDGVAIAYSTLKYIVEVMKCYCLFVTHYPLLAQLELQYPTQVGNFHMGYLEEKQD 1321
Query: 448 DG-----IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
I ++FLYKLV G S+G N+A LAG+P +V+
Sbjct: 1322 QQLQKSVIPKVIFLYKLVKGAAQNSYGLNIARLAGLPMEVI 1362
>gi|340518207|gb|EGR48449.1| DNA repair protein [Trichoderma reesei QM6a]
Length = 1205
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 46/71 (64%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+I D ++R P PDY+P+T+++PP K +P Q+W IK +D ++FFK GKFYEL+
Sbjct: 291 NIRDKEKRPPTDPDYDPRTIFIPPGAWAKFSPFEKQYWEIKQDLWDTIVFFKKGKFYELY 350
Query: 237 HMDAVIGADEL 247
DA IG E
Sbjct: 351 EKDATIGHQEF 361
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 53/112 (47%), Gaps = 4/112 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IGC+ FATHYHS+A P + M D D
Sbjct: 1052 RGTSSYDGVAVAQAVLHHVATHIGCIGFFATHYHSLATEFENHPEIRARRMQIHVD---D 1108
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR 500
I FLYKL G+ SFG + A + GI + V+K A + E L+
Sbjct: 1109 AQRRITFLYKLEDGVAEGSFGMHCAAMCGISDRVIKRAEIAAKEWEHTSRLK 1160
Score = 42.4 bits (98), Expect = 0.62, Method: Compositional matrix adjust.
Identities = 29/100 (29%), Positives = 51/100 (51%), Gaps = 4/100 (4%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
P++ E L Y+ AFD + A +IP++GVD+++D + I+ I+ ++ L +
Sbjct: 751 MPNLEEPLAYWSTAFDRRRAKEEKLMIPESGVDEDFDASVARIEEIKSQLDDLLAEKKTE 810
Query: 339 FGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATK 377
C T+ +++ K+ Y +E P K S Q ATK
Sbjct: 811 LKCKTLKFTDIGKEI--YQIEAP-KSVKIPSSWRQMSATK 847
>gi|449295288|gb|EMC91310.1| hypothetical protein BAUCODRAFT_39478 [Baudoinia compniacensis UAMH
10762]
Length = 1164
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 3/116 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFE--YMSYIEDKR 446
RGT T+DG IA L + ++ LT+F THY S+AR + P + +M + E +
Sbjct: 1020 RGTSTHDGVAIAEAVLNYIISKLKSLTLFITHYQSLARMAEQFPEGELKNVHMRFTEQQT 1079
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
G + FLY++ G+ +S+G NVA LAG+P ++ + QME + R+L
Sbjct: 1080 GSGETEVTFLYEVGDGVAHRSYGLNVARLAGLPGSLLDEARMRSSQMEEKERRRRL 1135
>gi|346321824|gb|EGX91423.1| DNA mismatch repair protein Msh3 [Cordyceps militaris CM01]
Length = 1099
Score = 75.9 bits (185), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 61/114 (53%), Gaps = 1/114 (0%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA+ L + + CLT+F THY ++AR + +M + D D
Sbjct: 958 RGTSTHDGAAIAQAVLHHVVAETRCLTLFITHYQNLARVADGLDGLTNVHMKFKADTGPD 1017
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
G + I FLY++ G+ +S+G NVA LA IP+ V+ + ME+ R+
Sbjct: 1018 GEEEITFLYEVGEGVAHRSYGLNVARLAHIPKKVIDVAAERSSAMESEMRTRRF 1071
>gi|393243806|gb|EJD51320.1| DNA mismatch repair protein Msh6 [Auricularia delicata TFB-10046
SS5]
Length = 1110
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
+ FL + D D R+P PDY+P+T+Y+P K TP Q+W IK +D VLFF+
Sbjct: 184 FSFLK--DVRDKDGRAPSDPDYDPRTIYIPKSAWKSFTPFERQFWEIKQNQYDTVLFFQK 241
Query: 230 GKFYELFHMDAVIGADEL 247
GKF+EL+ DA IG E
Sbjct: 242 GKFFELYENDARIGHQEF 259
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYM-SYIEDKRN 447
RGT T DG IA L + L+ FATHY S+ P + +M + ++D+R
Sbjct: 949 RGTSTYDGMAIAGAVLHEIATHTLALSCFATHYSSLTDDYAYHPQIRNMHMATRVDDERR 1008
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
+ +VFLYKLV G+ SFG +VA LAG+P DVV+ ++ A+
Sbjct: 1009 E----LVFLYKLVDGVATGSFGTHVASLAGVPSDVVERAEVISIDFAAK 1053
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 25/99 (25%), Positives = 51/99 (51%), Gaps = 2/99 (2%)
Query: 291 NAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQK 350
A + A +++P +G D+ YD+V++EI+ IE ++ L G + Y + +
Sbjct: 657 TAIEEMYALDDDSLLPASGKDETYDQVIEEIEDIEGNLERKLDKFADVVGTKLTYWHSAQ 716
Query: 351 KQKK-YVLEVPSKYASKAKSNHQRVATKKKNVENYVTPE 388
QK+ Y+++VP+ K S+ + + K ++ Y P+
Sbjct: 717 GQKEIYIVQVPAAKTKKVPSDWVQTNSTKA-MKRYDVPD 754
>gi|50306133|ref|XP_453028.1| hypothetical protein [Kluyveromyces lactis NRRL Y-1140]
gi|74660536|sp|Q6CSR1.1|MSH3_KLULA RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|49642161|emb|CAH01879.1| KLLA0C18590p [Kluyveromyces lactis]
Length = 1029
Score = 75.5 bits (184), Expect = 6e-11, Method: Compositional matrix adjust.
Identities = 56/181 (30%), Positives = 97/181 (53%), Gaps = 24/181 (13%)
Query: 367 AKSNHQRVATKKKNVENYVTPEC--------RGTGTNDGCVIARVTLEKFLQIG--C-LT 415
AKS Q ++ ++ N TP RGTGT+DG I+ L F+ + C L
Sbjct: 854 AKSTFQVEMSEVLHILNSSTPRSLLLLDEVGRGTGTHDGLSISFAILNYFVYLADNCPLV 913
Query: 416 VFATHYHSVARRLREEPNVAFEYMSYIEDKR-NDGIDTIVFLYKLVPGICPKSFGFNVAE 474
+F THY ++ + + +A +MSYIE + + ++FLYKLV G S+GFNVA+
Sbjct: 914 LFITHYSALCQI--DSKLIANYHMSYIEKHQPGEKWTNVIFLYKLVLGQAHNSYGFNVAK 971
Query: 475 LAGIPEDVVKFGTTVAFQ--MEARHNLRQLFIHKFASLVKSGEKVDVEELQK-ALESVKS 531
L+ IP +++ V+ + + ++H H F ++K+ ++V+ +L K AL+ +++
Sbjct: 972 LSNIPTEIINRAFEVSEEKILSSKH-------HNFLEIMKALKRVNERKLNKEALKKIQA 1024
Query: 532 F 532
F
Sbjct: 1025 F 1025
>gi|322706069|gb|EFY97651.1| DNA mismatch repair protein msh6 [Metarhizium anisopliae ARSEF 23]
Length = 1222
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 31/71 (43%), Positives = 47/71 (66%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+I D ++R+P P+Y+P+++Y+PP K +P Q+W IK +D ++FFK GKFYEL+
Sbjct: 309 NIRDKEKRAPSDPEYDPRSIYIPPMAWNKFSPFEKQYWEIKQNLWDTIVFFKKGKFYELY 368
Query: 237 HMDAVIGADEL 247
DA IG E
Sbjct: 369 ENDATIGHQEF 379
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/114 (32%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT + DG +A+ L IGC+ FATHYHS+A P + + M +++D+
Sbjct: 1069 RGTSSYDGVAVAQAVLHHVATHIGCVGFFATHYHSLATEFENHPEIRAKRMQIHVDDEER 1128
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLYKL G+ SFG + A + GI + V++ A E L++
Sbjct: 1129 ----KVTFLYKLEDGVAEGSFGMHCAAMCGISDRVIERAEVAARDWEHTSRLKE 1178
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 29/112 (25%), Positives = 58/112 (51%), Gaps = 6/112 (5%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD+ E L Y++ AFD ++A +IP G++ ++D+ ++ ++ I+ ++ L +
Sbjct: 768 MPDLEEPLTYWKTAFDRRKAREDKILIPSRGIEPDFDDSLNRMEEIKDQLNDLLSEKKGE 827
Query: 339 FGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPEC 389
C T+ +++ K + Y +E P K S Q AT K+V+ + P+
Sbjct: 828 LKCRTIKFTDVGK--EIYQMETP-KSVKVPSSWRQMSAT--KDVKRWYFPQL 874
>gi|195164888|ref|XP_002023278.1| GL21272 [Drosophila persimilis]
gi|194105363|gb|EDW27406.1| GL21272 [Drosophila persimilis]
Length = 887
Score = 75.5 bits (184), Expect = 7e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 82/172 (47%), Gaps = 18/172 (10%)
Query: 373 RVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREE 431
R AT K V + RGT T +GC IA E + C T+FATH+H + +
Sbjct: 705 RTATDKSLV--IIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAETL 762
Query: 432 PNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAF 491
P V +M+ + D D LY++ PG+ KSFG VA LA PEDVV+ V
Sbjct: 763 PTVKNCHMAALADA-----DNFTLLYQVRPGVMEKSFGIQVARLANFPEDVVQNAQEVYN 817
Query: 492 QMEARHNLRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQTKKDLEDL 543
+ E H A +K +E++Q A++ + + + T+ ++EDL
Sbjct: 818 EFEDEH----------ADKKNQEDKALLEKIQVAIQQLSTAGNNTEINVEDL 859
>gi|339499969|ref|YP_004698004.1| DNA mismatch repair protein mutS [Spirochaeta caldaria DSM 7334]
gi|338834318|gb|AEJ19496.1| DNA mismatch repair protein mutS [Spirochaeta caldaria DSM 7334]
Length = 890
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 45/95 (47%), Positives = 58/95 (61%), Gaps = 8/95 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGTGTNDG IA E+ L+ I C T+FATHYH ++R E P +A M +E D
Sbjct: 705 RGTGTNDGLSIAWAVCEELLEHIQCRTLFATHYHELSRI--EHPRLANRSMEVLE---QD 759
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
G I+FL KL G +S+G VA+LAG+PE V+
Sbjct: 760 G--RILFLRKLKEGATEESYGLFVAQLAGLPERVL 792
>gi|238878303|gb|EEQ41941.1| hypothetical protein CAWG_00132 [Candida albicans WO-1]
Length = 1214
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 2/101 (1%)
Query: 143 STPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEF 202
+TP + TP + + YQ+L I DA++R HPDY+P+TLY+P
Sbjct: 254 ATPKPKSTTIKSLTPPKKSFEKENEERYQWLV--DIRDAEKRPIDHPDYDPRTLYIPQSA 311
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
K T Q+W IKS+ ++ V+FF+ GKFYEL+ DAVI
Sbjct: 312 WSKFTAFEKQYWQIKSKMWNTVVFFQKGKFYELYENDAVIA 352
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/114 (35%), Positives = 53/114 (46%), Gaps = 4/114 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L + L FATHY ++ + P + M + D
Sbjct: 1050 RGGSSSDGFAIAESVLHHLATHVQSLGFFATHYGTLGLSFKTHPQIKQLRMGIVVDS--- 1106
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
G I FLYKL G PKSFG NVA + GIP+ +V A E L++L
Sbjct: 1107 GSRNITFLYKLETGTAPKSFGMNVASMCGIPDAIVDNAEIAAKAYEQTSKLKKL 1160
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 43/141 (30%), Positives = 76/141 (53%), Gaps = 17/141 (12%)
Query: 257 CTGESTLLTQLCNYESQTPSG---CFP-DMSELLKYFENAFDHKEASSAGNIIPKAGVDK 312
G S+ L N ES FP +M EL++ +E+AFD ++A + I+P AG D+
Sbjct: 725 IAGVSSKLVDFTNVESGMLYKYLKSFPHEMRELIQQWEDAFDREQAKN-DIIVPSAGTDE 783
Query: 313 EYDE---VMDEIKS-IEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAK 368
E+D M+++K+ ++K ++ Y RT + C Y ++ K+ Y++EVP K K
Sbjct: 784 EFDNSQASMEDLKTQLDKLLKEYKRTYKSQEIC---YRDSGKEI--YLIEVPFKL--KVP 836
Query: 369 SNHQRVATKKKNVENYVTPEC 389
+ +++ + K V+ Y +PE
Sbjct: 837 GDWKQMGSTSK-VKRYYSPEV 856
>gi|255539477|ref|XP_002510803.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
gi|223549918|gb|EEF51405.1| DNA mismatch repair protein MSH3, putative [Ricinus communis]
Length = 1100
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/164 (33%), Positives = 91/164 (55%), Gaps = 10/164 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVAR-RLREEPNVAFEYMSYI-EDKR 446
RGT T+DG IA TL L Q C+ +F THY +A R +V ++SY+ +K
Sbjct: 898 RGTSTHDGEAIAYATLCHLLEQKRCMVLFVTHYPKIANIRTGFLNSVGAYHVSYLMAEKN 957
Query: 447 NDGIDT------IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR 500
ND D+ + +LYKLVPG+ +SFGF VA+LA +P ++ T +A ++E + R
Sbjct: 958 NDATDSKFDNEDVTYLYKLVPGVSERSFGFKVAQLAQLPTSCIERATVMAARLEEAISCR 1017
Query: 501 QLFIHKFASLVKSGEKVDVEELQKAL-ESVKSFESQTKKDLEDL 543
+ L+K+ + ++E+Q+ + ES +F + ++ E+L
Sbjct: 1018 IRNRLDKSQLLKALQIDQLQEIQEKIPESPGNFHDKRIENYEEL 1061
>gi|198473172|ref|XP_001356195.2| GA18039 [Drosophila pseudoobscura pseudoobscura]
gi|198139335|gb|EAL33255.2| GA18039 [Drosophila pseudoobscura pseudoobscura]
Length = 914
Score = 75.5 bits (184), Expect = 8e-11, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 82/172 (47%), Gaps = 18/172 (10%)
Query: 373 RVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREE 431
R AT K V + RGT T +GC IA E + C T+FATH+H + +
Sbjct: 732 RTATDKSLV--IIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAETL 789
Query: 432 PNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAF 491
P V +M+ + D D LY++ PG+ KSFG VA LA PEDVV+ V
Sbjct: 790 PTVKNCHMAALADA-----DNFTLLYQVRPGVMEKSFGIQVARLANFPEDVVQNAQEVYN 844
Query: 492 QMEARHNLRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQTKKDLEDL 543
+ E H A +K +E++Q A++ + + + T+ ++EDL
Sbjct: 845 EFEDEH----------ADKKNQEDKALLEKIQVAIQQLSTAGNNTEINVEDL 886
>gi|417302906|ref|ZP_12089984.1| DNA mismatch repair protein MutS [Rhodopirellula baltica WH47]
gi|327540783|gb|EGF27349.1| DNA mismatch repair protein MutS [Rhodopirellula baltica WH47]
Length = 891
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A E QIG T+FATHYH +A P VA ++ E +
Sbjct: 715 RGTSTYDGLSLAWAITEHLHEQIGARTLFATHYHELAALQETLPRVANLSVAVKEWQ--- 771
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
D +VFL+++VPG KS+G VA LAGIP +V + V Q+EA H
Sbjct: 772 --DEVVFLHRIVPGSADKSYGIQVARLAGIPVEVNERAKDVLAQLEADHR 819
>gi|407844416|gb|EKG01956.1| mismatch repair protein MSH3, putative [Trypanosoma cruzi]
Length = 943
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/131 (35%), Positives = 66/131 (50%), Gaps = 8/131 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVA----RRLREEPNVAFEYMSYIEDK 445
RGT + DG +A TLE LQ G +F THY + E V+ YM + E++
Sbjct: 811 RGTSSFDGIAVAAATLEYLLQRGTTMLFVTHYSHLCEPYLHNTSEGKQVSCYYMGFSEEQ 870
Query: 446 ---RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
R D +VF YK PG+ P SFG VA +AG+P DVV ++ +ME R N+ ++
Sbjct: 871 DEERGDREPKLVFTYKPTPGVTPSSFGVRVARMAGLPHDVVAEAQRLS-EMEERENMTRM 929
Query: 503 FIHKFASLVKS 513
+ V +
Sbjct: 930 ALMLLRRFVNA 940
>gi|222529489|ref|YP_002573371.1| DNA mismatch repair protein MutS [Caldicellulosiruptor bescii DSM
6725]
gi|254766611|sp|B9MJU0.1|MUTS_ANATD RecName: Full=DNA mismatch repair protein MutS
gi|222456336|gb|ACM60598.1| DNA mismatch repair protein MutS [Caldicellulosiruptor bescii DSM
6725]
Length = 863
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 65/120 (54%), Gaps = 12/120 (10%)
Query: 390 RGTGTNDGCVIARVTLEKFL---QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG IA LE +IG T+FATHYH + P V +Y D +
Sbjct: 690 RGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELTELEERIPGVK----NYRVDVK 745
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA----RHNLRQL 502
+G I+FL K+V G C S+G +VA LAGIPE+V+K + Q+E R N+R+L
Sbjct: 746 EEG-KNIIFLRKIVRGGCDSSYGIHVARLAGIPEEVLKRAEEILKQLEEADINRKNIRKL 804
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+++ TP M Q+ IK + DC+LFF++G FYE+F DA++ + EL +
Sbjct: 1 MQELTPMMQQYMEIKQKVKDCILFFRLGDFYEMFFEDAIVASKELEIA 48
>gi|421611501|ref|ZP_16052641.1| DNA mismatch repair protein MutS [Rhodopirellula baltica SH28]
gi|408497744|gb|EKK02263.1| DNA mismatch repair protein MutS [Rhodopirellula baltica SH28]
Length = 891
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A E QIG T+FATHYH +A P VA ++ E +
Sbjct: 715 RGTSTYDGLSLAWAITEHLHEQIGARTLFATHYHELAALQETLPRVANLSVAVKEWQ--- 771
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
D +VFL+++VPG KS+G VA LAGIP +V + V Q+EA H
Sbjct: 772 --DEVVFLHRIVPGSADKSYGIQVARLAGIPVEVNERAKDVLAQLEADHR 819
>gi|32474719|ref|NP_867713.1| DNA mismatch repair protein MutS [Rhodopirellula baltica SH 1]
gi|44888173|sp|Q7UP05.1|MUTS_RHOBA RecName: Full=DNA mismatch repair protein MutS
gi|32445258|emb|CAD75260.1| DNA mismatch repair protein MUTS [Rhodopirellula baltica SH 1]
Length = 891
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A E QIG T+FATHYH +A P VA ++ E +
Sbjct: 715 RGTSTYDGLSLAWAITEHLHEQIGARTLFATHYHELAALQETLPRVANLSVAVKEWQ--- 771
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
D +VFL+++VPG KS+G VA LAGIP +V + V Q+EA H
Sbjct: 772 --DEVVFLHRIVPGSADKSYGIQVARLAGIPVEVNERAKDVLAQLEADHR 819
>gi|254876454|ref|ZP_05249164.1| DNA mismatch repair protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
gi|254842475|gb|EET20889.1| DNA mismatch repair protein [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 846
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 11/97 (11%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEP---NVAFEYMSYIEDKR 446
RGT T DG +A+ EKF +IG LT+FATHY + + + P N+ FE Y
Sbjct: 693 RGTSTFDGLSLAKACAEKFAKIGALTLFATHYFELTELVNQYPNTKNIHFEAKEY----- 747
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
D I F++K V G KS+G VA+LAGI +DV+
Sbjct: 748 ---KDNIYFMHKAVAGAAKKSYGIQVAKLAGISKDVL 781
Score = 46.2 bits (108), Expect = 0.047, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGES 261
TP + Q+ IKSQ D +LF+++G FYELF DA A+ L + G+S
Sbjct: 7 HTPMIQQYLKIKSQYPDILLFYRMGDFYELFFDDAKNAAELLDITLTARGKSNGDS 62
>gi|449137448|ref|ZP_21772774.1| DNA mismatch repair protein MutS [Rhodopirellula europaea 6C]
gi|448883900|gb|EMB14407.1| DNA mismatch repair protein MutS [Rhodopirellula europaea 6C]
Length = 891
Score = 75.1 bits (183), Expect = 9e-11, Method: Compositional matrix adjust.
Identities = 46/109 (42%), Positives = 60/109 (55%), Gaps = 6/109 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A E QIG T+FATHYH +A P VA ++ E +
Sbjct: 715 RGTSTYDGLSLAWAITEHLHEQIGARTLFATHYHELAALQETLPRVANLSVAVKEWQ--- 771
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARH 497
D +VFL+++VPG KS+G VA LAGIP +V + V Q+EA H
Sbjct: 772 --DEVVFLHRIVPGSADKSYGIQVARLAGIPVEVNERAKDVLAQLEADH 818
>gi|312127451|ref|YP_003992325.1| DNA mismatch repair protein muts [Caldicellulosiruptor
hydrothermalis 108]
gi|311777470|gb|ADQ06956.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
hydrothermalis 108]
Length = 863
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 65/120 (54%), Gaps = 12/120 (10%)
Query: 390 RGTGTNDGCVIARVTLEKFL---QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG IA LE +IG T+FATHYH + P V +Y D +
Sbjct: 690 RGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELTELEERIPGVK----NYRVDVK 745
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA----RHNLRQL 502
+G I+FL K+V G C S+G +VA LAGIPE+V+K + Q+E R N+R+L
Sbjct: 746 EEG-KNIIFLRKIVRGGCDSSYGIHVARLAGIPEEVLKRAEEILKQLEEADINRKNIRKL 804
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+++ TP M Q+ IK + DC+LFF++G FYE+F DA++ + EL +
Sbjct: 1 MQELTPMMQQYMEIKQKVRDCILFFRLGDFYEMFFEDAIVASKELEIA 48
>gi|440713279|ref|ZP_20893880.1| DNA mismatch repair protein MutS [Rhodopirellula baltica SWK14]
gi|436441745|gb|ELP34937.1| DNA mismatch repair protein MutS [Rhodopirellula baltica SWK14]
Length = 888
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/110 (41%), Positives = 60/110 (54%), Gaps = 6/110 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A E QIG T+FATHYH +A P VA ++ E +
Sbjct: 712 RGTSTYDGLSLAWAITEHLHEQIGARTLFATHYHELAALQETLPRVANLSVAVKEWQ--- 768
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
D +VFL+++VPG KS+G VA LAGIP +V + V Q+EA H
Sbjct: 769 --DEVVFLHRIVPGSADKSYGIQVARLAGIPVEVNERAKDVLAQLEADHR 816
>gi|303287829|ref|XP_003063203.1| predicted protein [Micromonas pusilla CCMP1545]
gi|226455035|gb|EEH52339.1| predicted protein [Micromonas pusilla CCMP1545]
Length = 290
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 59/116 (50%), Gaps = 21/116 (18%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSY-IEDKRN 447
RGT T DG +A +K L +GC T+FATH+H +AR R P+V +M+ + D
Sbjct: 175 RGTSTFDGYSVAFAAFKKLALGVGCRTMFATHFHGLAREFRASPDVQLAHMAATVADAGG 234
Query: 448 DGIDTI-------------------VFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
D FLYKL PG CPKS+G VA LA +P++V+K
Sbjct: 235 GEDDARGGGGGSAIASAAAPAPPPITFLYKLRPGACPKSYGVRVAALAAVPKEVLK 290
>gi|195973738|gb|ACG63434.1| DNA mismatch repair protein MutS [Francisella philomiragia]
Length = 776
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 15/113 (13%)
Query: 375 ATKKKNVENYVTPEC-RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEP- 432
ATKK V + E RGT T DG +A+ EKF +IG LT+FATHY + + + P
Sbjct: 658 ATKKSLV---IMDEIGRGTSTFDGLSLAKACAEKFAKIGALTLFATHYFELTELVNQYPN 714
Query: 433 --NVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
N+ FE Y D I F++K V G KS+G VA+LAGI +DV+
Sbjct: 715 TKNIHFEAKEY--------KDNIYFMHKAVAGAAKKSYGIQVAKLAGISKDVL 759
>gi|403416984|emb|CCM03684.1| predicted protein [Fibroporia radiculosa]
Length = 1089
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 62/223 (27%), Positives = 103/223 (46%), Gaps = 19/223 (8%)
Query: 318 MDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATK 377
M + +I +I +Y+ Q G E + + +++E+ + S+ ++AT
Sbjct: 875 MIALCAIMAQIGSYVPAQSMKIGLLDASDELARGRSTFMVEM------QQTSDILQLATP 928
Query: 378 KKNVENYVTPECRGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRL-REEP-NV 434
+ V + RGT T DG IA L+ ++ C T+F THY +A L R P +V
Sbjct: 929 RTLV--ILDELGRGTATFDGMAIASAVLQHLIEKTRCRTLFITHYPRLATDLERRFPLDV 986
Query: 435 AFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+M + ED R DG + FLY L G+ +SFG LAG+PE +++ + A +
Sbjct: 987 GNLHMGFAEDTRIDGTREVTFLYTLTHGLTEESFGVECGRLAGLPEQLLQVASERAQVLR 1046
Query: 495 A--RHNLRQLFIHKFASLV------KSGEKVDVEELQKALESV 529
A +RQ K L+ +G VEEL++ + +
Sbjct: 1047 AAITRRVRQNRFRKLTRLLSECINNSTGAARPVEELREYVAQI 1089
>gi|443726706|gb|ELU13785.1| hypothetical protein CAPTEDRAFT_157997 [Capitella teleta]
Length = 823
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/100 (42%), Positives = 60/100 (60%), Gaps = 7/100 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSV-ARRLREEPNVAFEYMSYIEDKRN 447
RGT T+DG IA TL +Q IGCL +F THY S+ A L +V +MS++ D
Sbjct: 689 RGTSTHDGQAIAHATLRHLVQEIGCLALFVTHYQSLSALELAFPSSVTNHHMSFLLD--- 745
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGT 487
+G+ T FLY+ V G +S+G NVA+LA IP+ ++ +
Sbjct: 746 EGVLT--FLYQCVRGAADRSYGLNVAKLADIPQSILSLAS 783
>gi|195973730|gb|ACG63430.1| DNA mismatch repair protein MutS [Francisella philomiragia subsp.
philomiragia ATCC 25015]
Length = 776
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 11/97 (11%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEP---NVAFEYMSYIEDKR 446
RGT T DG +A+ EKF +IG LT+FATHY + + + P N+ FE Y
Sbjct: 671 RGTSTFDGLSLAKACAEKFAKIGALTLFATHYFELTELVNQYPNTKNIHFEAKEY----- 725
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
D I F++K V G KS+G VA+LAGI +DV+
Sbjct: 726 ---KDNIYFMHKAVAGAAKKSYGIQVAKLAGISKDVL 759
>gi|387886386|ref|YP_006316685.1| DNA mismatch repair protein [Francisella noatunensis subsp.
orientalis str. Toba 04]
gi|386871202|gb|AFJ43209.1| DNA mismatch repair protein [Francisella noatunensis subsp.
orientalis str. Toba 04]
Length = 847
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 11/97 (11%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEP---NVAFEYMSYIEDKR 446
RGT T DG +A+ EKF +IG LT+FATHY + + + P N+ FE Y
Sbjct: 693 RGTSTFDGLSLAKACAEKFAKIGALTLFATHYFELTELVNQYPNTKNIHFEAKEY----- 747
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
D I F++K V G KS+G VA+LAGI +DV+
Sbjct: 748 ---KDNIYFMHKAVAGAAKKSYGIQVAKLAGISKDVL 781
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 30/56 (53%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGES 261
TP + Q+ IKSQ D +LF+++G FYELF DA + L + GES
Sbjct: 7 HTPMIQQYLKIKSQYPDILLFYRMGDFYELFFDDATNAVELLDITLTARGKSNGES 62
>gi|195973732|gb|ACG63431.1| DNA mismatch repair protein MutS [Francisella philomiragia]
Length = 776
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 11/97 (11%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEP---NVAFEYMSYIEDKR 446
RGT T DG +A+ EKF +IG LT+FATHY + + + P N+ FE Y
Sbjct: 671 RGTSTFDGLSLAKACAEKFAKIGALTLFATHYFELTELVNQYPNTKNIHFEAKEY----- 725
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
D I F++K V G KS+G VA+LAGI +DV+
Sbjct: 726 ---KDNIYFMHKAVAGAAKKSYGIQVAKLAGISKDVL 759
>gi|312793677|ref|YP_004026600.1| DNA mismatch repair protein muts [Caldicellulosiruptor
kristjanssonii 177R1B]
gi|312180817|gb|ADQ40987.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
kristjanssonii 177R1B]
Length = 863
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 65/120 (54%), Gaps = 12/120 (10%)
Query: 390 RGTGTNDGCVIARVTLEKFL---QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG IA LE +IG T+FATHYH + P V +Y D +
Sbjct: 690 RGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELTELEERIPGVK----NYRVDVK 745
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA----RHNLRQL 502
+G I+FL K+V G C S+G +VA LAGIPE+V+K + Q+E R N+R+L
Sbjct: 746 EEG-KNIIFLRKIVRGGCDSSYGIHVARLAGIPEEVLKRAEEILKQLEEADINRKNIRKL 804
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+++ TP M Q+ IK + DC+LFF++G FYE+F DA++ + EL +
Sbjct: 1 MQELTPMMQQYMEIKQKVKDCILFFRLGDFYEMFFEDAIVASKELEIA 48
>gi|195973734|gb|ACG63432.1| DNA mismatch repair protein MutS [Francisella philomiragia]
Length = 776
Score = 75.1 bits (183), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/113 (41%), Positives = 62/113 (54%), Gaps = 15/113 (13%)
Query: 375 ATKKKNVENYVTPEC-RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEP- 432
ATKK V + E RGT T DG +A+ EKF +IG LT+FATHY + + + P
Sbjct: 658 ATKKSLV---IMDEIGRGTSTFDGLSLAKACAEKFAKIGALTLFATHYFELTELVNQYPN 714
Query: 433 --NVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
N+ FE Y D I F++K V G KS+G VA+LAGI +DV+
Sbjct: 715 TKNIHFEAKEY--------KDNIYFMHKAVAGAAKKSYGIQVAKLAGISKDVL 759
>gi|390599126|gb|EIN08523.1| DNA mismatch repair protein Msh6 [Punctularia strigosozonata
HHB-11173 SS5]
Length = 1174
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 46/119 (38%), Positives = 64/119 (53%), Gaps = 10/119 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L + L+ FATHY S+ PN+ +M+ + D D
Sbjct: 998 RGTSTYDGMAIAGAVLHELATHTLALSFFATHYGSLTDDFAYHPNIRNMHMATMVD---D 1054
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA------FQMEARHNLRQ 501
+VFLYKLV GI SFG +VA+LAG+P DVV+ V+ F+ + +N+R+
Sbjct: 1055 EQQELVFLYKLVDGIASSSFGTHVAKLAGVPSDVVQRAAVVSEDFARQFKEKLANNVRK 1113
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/68 (47%), Positives = 42/68 (61%)
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
D D P P Y+P+TL++P + K+ TP Q+W IK +FD VLFF+ GKF EL+ D
Sbjct: 219 DRDGVRPGEPGYDPRTLHIPAKAWKEFTPFEKQFWEIKQNHFDTVLFFQKGKFLELYEDD 278
Query: 240 AVIGADEL 247
A IG E
Sbjct: 279 ARIGHREF 286
Score = 45.1 bits (105), Expect = 0.098, Method: Compositional matrix adjust.
Identities = 37/138 (26%), Positives = 63/138 (45%), Gaps = 7/138 (5%)
Query: 259 GESTLLTQLCNYESQTPSGCF---PDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYD 315
G S+L ++S+ +G PD++ LK ++ F K A +G + P G D+EYD
Sbjct: 670 GLSSLADVAAEFDSKMITGLLRSAPDLTPNLKNVQSMF-KKPAEGSGELEPMDGKDEEYD 728
Query: 316 EVMDEIKSIEKEIQTYLRTQCAHFGCTVIY-SEAQKKQKKYVLEVPSKYASKAKSNHQRV 374
VM EI +EK ++ L+ G + Y A + Y+++ + + + K +
Sbjct: 729 NVMSEIARLEKALEKKLKQLEDEVGTDLTYWHSALGTKDIYLVQTKASFKNIPKQWTKHG 788
Query: 375 ATKKKNVENYVTPECRGT 392
ATK + P GT
Sbjct: 789 ATKA--AARWTVPALAGT 804
>gi|312622277|ref|YP_004023890.1| DNA mismatch repair protein muts [Caldicellulosiruptor
kronotskyensis 2002]
gi|312202744|gb|ADQ46071.1| DNA mismatch repair protein MutS [Caldicellulosiruptor
kronotskyensis 2002]
Length = 863
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 65/120 (54%), Gaps = 12/120 (10%)
Query: 390 RGTGTNDGCVIARVTLEKFL---QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG IA LE +IG T+FATHYH + P V +Y D +
Sbjct: 690 RGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELTELEERIPGVK----NYRVDVK 745
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA----RHNLRQL 502
+G I+FL K+V G C S+G +VA LAGIPE+V+K + Q+E R N+R+L
Sbjct: 746 EEG-KNIIFLRKIVRGGCDSSYGIHVARLAGIPEEVLKRAEEILKQLEEADINRKNIRKL 804
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+++ TP M Q+ IK + DC+LFF++G FYE+F DA++ + EL +
Sbjct: 1 MQELTPMMQQYMEIKQKVKDCILFFRLGDFYEMFFEDAIVASKELEIA 48
>gi|401626342|gb|EJS44294.1| msh6p [Saccharomyces arboricola H-6]
Length = 1247
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/123 (33%), Positives = 67/123 (54%), Gaps = 6/123 (4%)
Query: 121 RGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILD 180
+ +S S + +PK + + P S TS+++ ++ YQ+L + D
Sbjct: 237 KSISQNSSRGGSRPKQVQRKSYTPPHSQKSATSKSSKFNKQNEE----RYQWLVDER--D 290
Query: 181 ADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDA 240
A RR P+Y+ +TLY+P K TP Q+W IKS+ +DC++FFK GKF+EL+ DA
Sbjct: 291 AQRRPKNDPEYDQRTLYIPSSAWNKFTPFEKQYWEIKSKMWDCIVFFKKGKFFELYEKDA 350
Query: 241 VIG 243
++
Sbjct: 351 LLA 353
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 38/113 (33%), Positives = 54/113 (47%), Gaps = 8/113 (7%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDK--R 446
RG ++DG IA L I L FATHY ++A + P V MS + D+ R
Sbjct: 1070 RGGSSSDGFAIAESVLHHVATHIQSLGFFATHYGTLALSFKHHPQVRSLKMSILVDEVTR 1129
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
N + FLYK++ G SFG +VA + GI +D++ A +E L
Sbjct: 1130 N-----VTFLYKMLEGQSEGSFGMHVASMCGISKDIIDNAQIAADNLELTSRL 1177
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 40/149 (26%), Positives = 74/149 (49%), Gaps = 6/149 (4%)
Query: 279 FP-DMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCA 337
FP ++ E ++ + NAF ++A I+P+ G D E+D+ +D+I+ +E ++ L +
Sbjct: 754 FPKELVECVENWTNAFQRQKAIDENIIVPQRGFDIEFDKSLDKIQELEDKLMEILMSYRK 813
Query: 338 HFGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRGTGTND 396
F C+ I Y ++ K + Y +E+P SN ++A K+ + Y + E R +
Sbjct: 814 QFKCSNIQYKDSGK--EIYTVEIPVSVTKNVPSNWIQMAA-NKSYKRYYSDEVRALARSM 870
Query: 397 G-CVIARVTLEKFLQIGCLTVFATHYHSV 424
TLE+ L+ F HY+S+
Sbjct: 871 AEAKELHKTLEEDLKNRLCQKFDAHYNSI 899
>gi|356575955|ref|XP_003556101.1| PREDICTED: DNA mismatch repair protein Msh3-like [Glycine max]
Length = 1070
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 67/117 (57%), Gaps = 6/117 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEP-NVAFEYMSYI---ED 444
RGT T+DG IA TL L Q + +F THY +A E P +VA ++S++ +
Sbjct: 874 RGTSTHDGMAIAHATLHYLLKQKRSMVLFVTHYPKIASLATEFPGSVAAYHVSHLISHDA 933
Query: 445 KRNDGID-TIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR 500
+N +D + +LYKLVPG+ +SFGF VA+LA +P + +A ++EA N R
Sbjct: 934 SKNSNLDHDVTYLYKLVPGVSERSFGFKVAQLAQLPSHCISRAIVMASKLEALVNSR 990
>gi|344996159|ref|YP_004798502.1| DNA mismatch repair protein mutS [Caldicellulosiruptor
lactoaceticus 6A]
gi|343964378|gb|AEM73525.1| DNA mismatch repair protein mutS [Caldicellulosiruptor
lactoaceticus 6A]
Length = 863
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/120 (40%), Positives = 65/120 (54%), Gaps = 12/120 (10%)
Query: 390 RGTGTNDGCVIARVTLEKFL---QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG IA LE +IG T+FATHYH + P V +Y D +
Sbjct: 690 RGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELTELEERIPGVK----NYRVDVK 745
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA----RHNLRQL 502
+G I+FL K+V G C S+G +VA LAGIPE+V+K + Q+E R N+R+L
Sbjct: 746 EEG-KNIIFLRKIVRGGCDSSYGIHVARLAGIPEEVLKRAGEILKQLEEADINRKNIRKL 804
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/45 (44%), Positives = 32/45 (71%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL 247
+++ TP M Q+ IK + DC+LFF++G FYE+F DA++ + EL
Sbjct: 1 MQELTPMMQQYMEIKQKVKDCILFFRLGDFYEMFFEDAIVASKEL 45
>gi|448116813|ref|XP_004203106.1| Piso0_000705 [Millerozyma farinosa CBS 7064]
gi|359383974|emb|CCE78678.1| Piso0_000705 [Millerozyma farinosa CBS 7064]
Length = 1008
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 44/107 (41%), Positives = 61/107 (57%), Gaps = 8/107 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGC--LTVFATHYHSVARRLREEPNVAFEY-MSYIED-K 445
RGTGTNDG IA L ++ LT+F TH+ S+ + + Y M Y+E+ K
Sbjct: 862 RGTGTNDGIAIAFSVLNYLIENPAKPLTLFITHFPSLHVFEQNYIGIVSNYHMGYVENYK 921
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQ 492
++ I+FLY LV G+ KS+G NVA LAGIP +V++ AFQ
Sbjct: 922 KDQEFPEILFLYNLVKGVVSKSYGLNVANLAGIPNSIVRY----AFQ 964
>gi|426230068|ref|XP_004009104.1| PREDICTED: DNA mismatch repair protein Msh3 [Ovis aries]
Length = 1119
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 81/146 (55%), Gaps = 14/146 (9%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLRE-EPNVAFEYMSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + V +M ++ E
Sbjct: 966 RGTSTHDGIAIAYATLEHFIRDVESLTLFVTHYPPVCELEKSYSQQVGNYHMGFLVNEDE 1025
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K++ G D+++FLY++ GI +S+G NVA+LA +P +++K + + ++E N
Sbjct: 1026 SKQDAGEEDQVPDSVIFLYQITRGIAARSYGLNVAKLADVPGEILKKAASKSKELEGLVN 1085
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQK 524
+++ + FA L D ++LQK
Sbjct: 1086 MKRKKLKSFAKLWTVN---DAKDLQK 1108
>gi|195973740|gb|ACG63435.1| DNA mismatch repair protein MutS [Francisella noatunensis subsp.
orientalis]
gi|225624837|gb|ACN96553.1| MutS [Francisella noatunensis subsp. orientalis]
Length = 776
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 11/97 (11%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEP---NVAFEYMSYIEDKR 446
RGT T DG +A+ EKF +IG LT+FATHY + + + P N+ FE Y
Sbjct: 671 RGTSTFDGLSLAKACAEKFAKIGALTLFATHYFELTELVNQYPNTKNIHFEAKEY----- 725
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
D I F++K V G KS+G VA+LAGI +DV+
Sbjct: 726 ---KDNIYFMHKAVAGAAKKSYGIQVAKLAGISKDVL 759
>gi|171687199|ref|XP_001908540.1| hypothetical protein [Podospora anserina S mat+]
gi|170943561|emb|CAP69213.1| unnamed protein product [Podospora anserina S mat+]
Length = 1118
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 47/151 (31%), Positives = 83/151 (54%), Gaps = 10/151 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLRE--EPNVAFEYMSYIEDKR 446
RGT T+DG IA L+ + ++GCLT+F THY ++AR + V +M + ++
Sbjct: 970 RGTSTHDGAAIAHAVLDYVVKEVGCLTLFITHYQNLARVAEGLGDGRVRCVHMKFRVERG 1029
Query: 447 NDGI---DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL- 502
DG + + FLY++ G+ +S+G NV LA +P+ V++ + +ME R+L
Sbjct: 1030 GDGDGQEEEVTFLYEVAEGVAHRSYGLNVGRLARLPKQVLEVAGVKSREMEEEVKERRLK 1089
Query: 503 -FIHKFASLVKSGEKVDVEELQKALESVKSF 532
+ L+ +GEK + EEL++ +E ++
Sbjct: 1090 GVVGLLGGLM-NGEKGE-EELEQLVEGIEQL 1118
>gi|451982372|ref|ZP_21930688.1| DNA mismatch repair protein mutS [Nitrospina gracilis 3/211]
gi|451760378|emb|CCQ91973.1| DNA mismatch repair protein mutS [Nitrospina gracilis 3/211]
Length = 882
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 60/184 (32%), Positives = 80/184 (43%), Gaps = 25/184 (13%)
Query: 330 TYLR-----TQCAHFGCTVIYSEAQKKQKKYVLEV--PSKYASKAKSNHQRVATKKKNVE 382
TYLR A GC V EA+ + + K +S + N+
Sbjct: 639 TYLRQVALIVLMAQIGCFVPAEEAEIGLVDRIFSRVGAQDHLQKGQSTFMVEMNETANIL 698
Query: 383 NYVTPEC--------RGTGTNDGCVIARVTLEKFLQ----IGCLTVFATHYHSVARRLRE 430
N T RGT T DG IA +E FLQ IG T+FATHYH + R
Sbjct: 699 NNATRRSLIVLDEIGRGTSTFDGISIAWAIVE-FLQGPGHIGAKTLFATHYHELTELER- 756
Query: 431 EPNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
F + + + D I+FL K+VPG KS+G +VA LAG+PE V++ V
Sbjct: 757 ----LFHSVKNYNVQIKEWNDQIIFLRKIVPGGADKSYGIHVARLAGLPEQVLQRANEVL 812
Query: 491 FQME 494
F +E
Sbjct: 813 FNLE 816
Score = 43.9 bits (102), Expect = 0.25, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 26/39 (66%)
Query: 202 FLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDA 240
L TP M Q+ +IK + D +LFF++G FYE+F+ DA
Sbjct: 10 LLDDDTPMMQQYQSIKKEFPDAILFFRMGDFYEMFNEDA 48
>gi|326668008|ref|XP_003198705.1| PREDICTED: DNA mismatch repair protein Msh3-like [Danio rerio]
Length = 1083
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 68/121 (56%), Gaps = 9/121 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEP-NVAFEYMSYI----- 442
RGT T+DG IA TLE F+ ++GC+T+F THY + P +V +M+++
Sbjct: 935 RGTSTHDGIAIAYATLESFIREVGCMTLFVTHYPPLCELEHLYPQHVGNYHMAFLLNEPE 994
Query: 443 --EDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR 500
D+ + I FLY+L+ G +S+G NVA LA IPE +++ + ++EA N R
Sbjct: 995 STSDEEEAQPEFITFLYQLIEGAAARSYGLNVARLAEIPESILRTAAFKSKELEALVNSR 1054
Query: 501 Q 501
+
Sbjct: 1055 R 1055
>gi|269836700|ref|YP_003318928.1| DNA mismatch repair protein MutS [Sphaerobacter thermophilus DSM
20745]
gi|269785963|gb|ACZ38106.1| DNA mismatch repair protein MutS [Sphaerobacter thermophilus DSM
20745]
Length = 871
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 8/109 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL---QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG IAR +E ++GC T+FATHYH + + P V +Y D
Sbjct: 702 RGTSTYDGLAIARAVVEHLHNSPRLGCKTLFATHYHELTELEKILPRV----RNYRVDVL 757
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
+G D +VFL+++VPG +S+G +VA+LAG+P VV+ + +E
Sbjct: 758 EEG-DEVVFLHRVVPGGADRSYGIHVAQLAGMPRAVVRRAGEILADLEG 805
>gi|346322336|gb|EGX91935.1| DNA mismatch repair protein msh6 [Cordyceps militaris CM01]
Length = 1207
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 70/247 (28%), Positives = 113/247 (45%), Gaps = 21/247 (8%)
Query: 14 DSESSTPASSKGKKTSKSPAKSEDDSPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSE 73
D S+PA K +K SEDD PV+ RR++ R + + + D + +
Sbjct: 126 DPAGSSPAR-KSRKAVSYAESSEDDEPVSTVNRRRT--RARLVVDDEDNYGDDGDADVQD 182
Query: 74 DEYVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKK 133
DE VE +S+ ++ + + PT + + ++P ++ + T
Sbjct: 183 DEDDIDDFVVEDDSDGATPRPKKRKRPSQPTTARKRSNISPPATKDELSDLNDDDVMTDI 242
Query: 134 PKLTAPSTPSTPSF-PVSDTSE--TTPSTSGAQD-----WSHN-----HYQFLHPDHILD 180
P P++ SF P S+ TTP+ A+D +H Y +L I D
Sbjct: 243 P---PPTSAKQWSFDPESEEKRPVTTPAERAAKDPKRKEKAHTKEPDERYSWLS--KIRD 297
Query: 181 ADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDA 240
++R P PDY+P+T+++PP +P Q+W IK +D ++FFK GKFYEL+ DA
Sbjct: 298 KEKREPGDPDYDPRTIFIPPLAWNNFSPFEKQYWEIKQNLWDTIVFFKKGKFYELYENDA 357
Query: 241 VIGADEL 247
IG E
Sbjct: 358 TIGHQEF 364
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 79/292 (27%), Positives = 113/292 (38%), Gaps = 45/292 (15%)
Query: 233 YELFHMDAVIGADELAC--SYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFE 290
YEL+ + A+ +L C S K S C GE + Q F D L FE
Sbjct: 892 YELW-LSAIQAIAQLDCLVSLAKASSCLGEPSCRPQ------------FVDQDRSLVEFE 938
Query: 291 NAFDHKEASSAGNIIP---KAGVDKEYDEVMDEIKSIEKEIQTYLRTQC-----AHFGCT 342
++ G+ IP K G ++ ++ + K T LR C A GC
Sbjct: 939 ELRHPCMLNTTGDFIPNDIKLGGEQANINLLTGANAAGK--STVLRMSCIAVIMAQIGC- 995
Query: 343 VIYSEAQKKQKKYVLEVPSKYASK-----AKSNHQRVATKKKNVENYVTPEC-------- 389
Y A + V + S+ + A+S ++ K + TP
Sbjct: 996 --YVPAVSAKLTPVDRIMSRLGANDNIFAAQSTFFVELSETKKILAEATPRSLVILDELG 1053
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IGC+ FATHYHS+A P + M D D
Sbjct: 1054 RGTSSYDGVAVAQAVLHHVATHIGCVGFFATHYHSLATEFENHPEIRARRMQIHVD---D 1110
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR 500
I FLYKL G+ SFG + A + GI V++ A + E L+
Sbjct: 1111 AERRITFLYKLEDGVAEGSFGMHCAAMCGISNTVIERAEVAAKEWEHTSRLK 1162
Score = 45.8 bits (107), Expect = 0.066, Method: Compositional matrix adjust.
Identities = 24/109 (22%), Positives = 58/109 (53%), Gaps = 5/109 (4%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
P + E L Y+ NAFD ++A +IP+ G+++++D ++ +++I+ ++Q L +
Sbjct: 753 MPSLEEPLAYWRNAFDRRKAKDEKILIPERGIEEDFDASLERMENIKSQLQELLTEKKGE 812
Query: 339 FGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVT 386
C + +++ K+ + ++ + A K S+ ++++ K Y T
Sbjct: 813 LKCKALKFTDVGKE----IFQIEAPKAIKVPSSWRQMSATKDVKRWYFT 857
>gi|444321562|ref|XP_004181437.1| hypothetical protein TBLA_0F03840 [Tetrapisispora blattae CBS 6284]
gi|387514481|emb|CCH61918.1| hypothetical protein TBLA_0F03840 [Tetrapisispora blattae CBS 6284]
Length = 1256
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 48/75 (64%), Gaps = 2/75 (2%)
Query: 169 HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFK 228
YQ+L +I DA PDY+P+TLY+P K TP Q+W IKS+ +DC++FFK
Sbjct: 295 RYQWLV--NIKDAQGHEESDPDYDPRTLYIPSSAWGKFTPFEKQYWEIKSKMWDCIVFFK 352
Query: 229 VGKFYELFHMDAVIG 243
GKF+EL+ DA++
Sbjct: 353 KGKFFELYEKDAILA 367
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 39/122 (31%), Positives = 58/122 (47%), Gaps = 5/122 (4%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L I L FATHY ++ + P + M + D D
Sbjct: 1085 RGGSSSDGFAIAESVLHHVATHIQSLGFFATHYGNLGLSFKSHPQIRELKMQILVD---D 1141
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL-RQLFIHKF 507
+ FLYKL+ G SFG +VA + GIP+++V A +E L +++ I K
Sbjct: 1142 KTRNVTFLYKLINGQSEGSFGMHVASMCGIPKEIVDRAQDAADNLEHTSKLFKEMQIQKG 1201
Query: 508 AS 509
A+
Sbjct: 1202 AA 1203
Score = 40.4 bits (93), Expect = 2.6, Method: Compositional matrix adjust.
Identities = 36/125 (28%), Positives = 58/125 (46%), Gaps = 8/125 (6%)
Query: 267 LCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEK 326
L + SQ P F D +K + NAFD ++A I GV+ E+D+ + I SIE
Sbjct: 762 LKTFLSQVPESLFND----VKNWSNAFDRRKALEEDIIELHLGVEPEFDQSRECILSIEN 817
Query: 327 EIQTYLRTQCAHFGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYV 385
E+ L F + I Y ++ K+ Y +EVP S+ ++ + K + + Y
Sbjct: 818 ELNDILSGYKRRFKTSNIKYKDSGKEL--YTIEVPISIVKSIPSDWVQMGSTKTS-KRYY 874
Query: 386 TPECR 390
+ E R
Sbjct: 875 SEEVR 879
>gi|237838321|ref|XP_002368458.1| DNA mismatch repair protein, putative [Toxoplasma gondii ME49]
gi|211966122|gb|EEB01318.1| DNA mismatch repair protein, putative [Toxoplasma gondii ME49]
Length = 1607
Score = 74.7 bits (182), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA +LE + C +FATHYH + ++ P+V +M + N+
Sbjct: 1426 RGTSTFDGTAIALASLEHITDNLQCRCLFATHYHLLCYEMQGHPHVVNVHM---KAAINE 1482
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
++ FLYKL G+CPKS G +VA LAGI +++ + +++ + +RQ +
Sbjct: 1483 EQQSLAFLYKLTKGVCPKSHGIHVARLAGIDPRILECAEEKSLRLQ-QEVVRQQRHWRLL 1541
Query: 509 SLVKSGEKVDVEELQKALESVKSFESQTKKDLEDL 543
+ K+ E D LQ S ++ + LEDL
Sbjct: 1542 GVAKTLEAADPATLQ-------SLFARKESVLEDL 1569
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 190 DYNPKTLYVP--------PEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAV 241
DY+ +L++P TP M Q+W IK ++FD ++ FK+GKFYEL + DA
Sbjct: 452 DYDFSSLWIPSPDSQLARAHARPHMTPGMAQYWEIKKEHFDKLILFKIGKFYELVYGDAC 511
Query: 242 IGADELACSYMKESG 256
L +M G
Sbjct: 512 AAHRILDLKWMGGGG 526
>gi|145547527|ref|XP_001459445.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124427270|emb|CAK92048.1| unnamed protein product [Paramecium tetraurelia]
Length = 1084
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 61/109 (55%), Gaps = 12/109 (11%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG +A L ++LQ I LT+FATHYH + N+ M Y ++K
Sbjct: 960 RGTSTYDGIALASAVL-RYLQEKIKPLTIFATHYHILLDEFELFKNINQCVMLYYQNK-- 1016
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
D ++F YKLV G+ +SF NVA AGIP++V++ A QME R
Sbjct: 1017 ---DQLIFRYKLVEGVAERSFSTNVALKAGIPQEVIQ----TAKQMETR 1058
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 44/73 (60%)
Query: 172 FLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGK 231
FL P++I D+ R P P+YNP TLY+ +K +P Q+W +K NF+ + FF+ G
Sbjct: 119 FLQPENIRDSKGRRPNEPNYNPSTLYISNYEYEKLSPIFKQYWNVKKNNFEFIAFFRCGS 178
Query: 232 FYELFHMDAVIGA 244
+ + + DA++ A
Sbjct: 179 WIAVLYNDAIVIA 191
>gi|397576511|gb|EJK50299.1| hypothetical protein THAOC_30749 [Thalassiosira oceanica]
Length = 874
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 56/168 (33%), Positives = 83/168 (49%), Gaps = 23/168 (13%)
Query: 373 RVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREE 431
R ATK+ + + RGT T DG +A+ E +Q IGC+TVFATH+H + +E
Sbjct: 694 RTATKRSLI--IIDELGRGTSTFDGYGLAKAISEHIVQKIGCITVFATHFHELTALEGQE 751
Query: 432 PNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAF 491
+V ++S D++ D + FLY++ PG C +SFG VAE+A +P VV
Sbjct: 752 ASVVNCHVSAHSDRQ----DGLTFLYEVRPGPCLESFGIAVAEMANMPPSVVN------- 800
Query: 492 QMEARHNLRQLFIHKFASLVKS-------GEKVDVEELQKALESVKSF 532
EA+ R L + VKS G+ E + A+E + F
Sbjct: 801 --EAKRKARMLENFDYRKRVKSSDEENECGDNESSETVSAAMECLHKF 846
>gi|344302555|gb|EGW32829.1| hypothetical protein SPAPADRAFT_70807 [Spathaspora passalidarum
NRRL Y-27907]
Length = 968
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 49/136 (36%), Positives = 69/136 (50%), Gaps = 9/136 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGC--LTVFATHYHSVARRLREEPNVAFEY-MSYIEDKR 446
RGTGT DG IA L+ ++ L F THY S+ E P Y M + E +
Sbjct: 828 RGTGTTDGIAIAYSVLKYLVECNQRPLVCFITHYPSLHVLEEEFPGQVVNYHMGFKEVAK 887
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV----KFGTTVAFQMEARHNLRQL 502
+ +VFLY LV G+ S+G NVA+LAG+P +++ K + ++EAR R
Sbjct: 888 DGEFPEVVFLYNLVRGVIGNSYGLNVAKLAGVPHEIIQGAYKVSEILRNKIEARDQHR-- 945
Query: 503 FIHKFASLVKSGEKVD 518
F K +KSGE +D
Sbjct: 946 FYMKLMQAIKSGEDLD 961
>gi|323454910|gb|EGB10779.1| hypothetical protein AURANDRAFT_71064 [Aureococcus anophagefferens]
Length = 1140
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 4/108 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIG-CLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA + + C +FATHYH + +V +M + D +D
Sbjct: 1028 RGTATWDGAAIAHAVVHHLVANSKCRALFATHYHDLVASWAGHSDVQLGHMDCLVDPESD 1087
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
T+VFLYKL G PKSFG NVA+LA +P+ V+ + + EA+
Sbjct: 1088 ---TVVFLYKLTDGCSPKSFGINVAKLAKLPKKVLDRAAAKSAEFEAK 1132
Score = 74.3 bits (181), Expect = 1e-10, Method: Compositional matrix adjust.
Identities = 36/88 (40%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFL----KKQTPCMGQWWTIKSQNFDCVL 225
Y F D DA P ++ +TL VP + K + QWW +KS +FDC+L
Sbjct: 285 YAFAGADR-RDAAGLRPGDAGFDCRTLKVPKDCAVYRGKGLSEVQRQWWAVKSTHFDCLL 343
Query: 226 FFKVGKFYELFHMDAVIGADELACSYMK 253
FFK+GKFYE++HMDA +G + YMK
Sbjct: 344 FFKIGKFYEMYHMDADVGVRDGGLVYMK 371
>gi|374110031|gb|AEY98936.1| FAGR116Wp [Ashbya gossypii FDAG1]
Length = 1167
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 33/72 (45%), Positives = 49/72 (68%), Gaps = 2/72 (2%)
Query: 169 HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFK 228
YQ+L + DA RSP P+Y+P+TL++P + + TP Q+W IKS+ +DC++FFK
Sbjct: 205 RYQWLVDER--DAAGRSPSDPEYDPRTLHIPAQAWARFTPFEKQYWQIKSKMWDCIVFFK 262
Query: 229 VGKFYELFHMDA 240
GKF+EL+ DA
Sbjct: 263 KGKFFELYEKDA 274
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L + L FATHY ++ + P V M+ + D +
Sbjct: 993 RGGSSSDGFAIAEGVLHHISTHVQSLGFFATHYGTLGQSFTHHPMVKPLQMAILVD---E 1049
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
G + FLYKL+ G SFG +VA + GIP VV+
Sbjct: 1050 GSKKVTFLYKLIEGQSEGSFGMHVAAMCGIPRSVVE 1085
Score = 45.4 bits (106), Expect = 0.078, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 9/134 (6%)
Query: 263 LLTQLCNYE-SQTPSGCFPDMSELLKY----FENAFDHKEASSAGNIIPKAGVDKEYDEV 317
L++ L YE S + S D+ LK + +D A S G ++P AGV+ ++D
Sbjct: 657 LISSLNEYELSGSLSRFLHDIPSTLKSDVESWTTLYDRNMAVSEGKVVPNAGVEPDFDVS 716
Query: 318 MDEIKSIEKEIQTYLRTQCAHFGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVAT 376
+ +++++E+E+ L F C+ I Y ++ K+ Y +E+P A SN ++
Sbjct: 717 LSKMRALEEELDAVLSEYKRSFKCSKIQYKDSGKEL--YTIELPISIAKSVPSNWTQLGA 774
Query: 377 KKKNVENYVTPECR 390
K+ + Y +P+ +
Sbjct: 775 -NKSTKRYYSPKVQ 787
>gi|221484273|gb|EEE22569.1| DNA mismatch repair protein, putative [Toxoplasma gondii GT1]
Length = 1676
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA +LE + C +FATHYH + ++ P+V +M + N+
Sbjct: 1495 RGTSTFDGTAIALASLEHITDNLQCRCLFATHYHLLCYEMQGHPHVVNVHM---KAAINE 1551
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
++ FLYKL G+CPKS G +VA LAGI +++ + +++ + +RQ +
Sbjct: 1552 EQQSLAFLYKLTKGVCPKSHGIHVARLAGIDPRILECAEEKSLRLQ-QEVVRQQRHWRLL 1610
Query: 509 SLVKSGEKVDVEELQKALESVKSFESQTKKDLEDL 543
+ K+ E D LQ S ++ + LEDL
Sbjct: 1611 GVAKTLEAADPATLQ-------SLFARKESVLEDL 1638
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 190 DYNPKTLYVP--------PEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAV 241
DY+ +L++P TP M Q+W IK ++FD ++ FK+GKFYEL + DA
Sbjct: 524 DYDFSSLWIPSPDSQLARAHARPHMTPGMAQYWEIKKEHFDKLILFKIGKFYELVYGDAC 583
Query: 242 IGADELACSYMKESG 256
L +M G
Sbjct: 584 AAHRILDLKWMGGGG 598
>gi|449267844|gb|EMC78740.1| DNA mismatch repair protein Msh3, partial [Columba livia]
Length = 660
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 52/149 (34%), Positives = 81/149 (54%), Gaps = 19/149 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEP-NVAFEYMSYI----- 442
RGT T+DG IA TLE F++ + LT+F THY SV + P V +M+++
Sbjct: 513 RGTSTHDGIAIAYATLEHFIRDVESLTLFVTHYPSVCDLEKVYPEKVGNYHMAFLVNEEE 572
Query: 443 -------EDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
ED N + I FLY++ G+ +S+G NVA+LA IPE+++K + ++E
Sbjct: 573 SAEQKGPEDGENP--EFITFLYQITKGVSARSYGLNVAKLADIPEEILKKAADKSKELET 630
Query: 496 RHNLRQLFIHKFASLVKSGEKVDVEELQK 524
N+++ + FA + K D +ELQK
Sbjct: 631 IVNMKRKKLKSFAEVWKIN---DSQELQK 656
>gi|221505747|gb|EEE31392.1| DNA mismatch repair protein, putative [Toxoplasma gondii VEG]
Length = 1682
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/155 (32%), Positives = 79/155 (50%), Gaps = 12/155 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA +LE + C +FATHYH + ++ P+V +M + N+
Sbjct: 1501 RGTSTFDGTAIALASLEHITDNLQCRCLFATHYHLLCYEMQGHPHVVNVHM---KAAINE 1557
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
++ FLYKL G+CPKS G +VA LAGI +++ + +++ + +RQ +
Sbjct: 1558 EQQSLAFLYKLTKGVCPKSHGIHVARLAGIDPRILECAEEKSLRLQ-QEVVRQQRHWRLL 1616
Query: 509 SLVKSGEKVDVEELQKALESVKSFESQTKKDLEDL 543
+ K+ E D LQ S ++ + LEDL
Sbjct: 1617 GVAKTLESADPATLQ-------SLFARKESVLEDL 1644
Score = 52.8 bits (125), Expect = 5e-04, Method: Compositional matrix adjust.
Identities = 26/75 (34%), Positives = 38/75 (50%), Gaps = 8/75 (10%)
Query: 190 DYNPKTLYVP--------PEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAV 241
DY+ +L++P TP M Q+W IK ++FD ++ FK+GKFYEL + DA
Sbjct: 530 DYDFSSLWIPSPDSQLARAHARPHMTPGMAQYWEIKKEHFDKLILFKIGKFYELVYGDAC 589
Query: 242 IGADELACSYMKESG 256
L +M G
Sbjct: 590 AAHRILDLKWMGGGG 604
>gi|194758569|ref|XP_001961534.1| GF14885 [Drosophila ananassae]
gi|190615231|gb|EDV30755.1| GF14885 [Drosophila ananassae]
Length = 917
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 55/172 (31%), Positives = 82/172 (47%), Gaps = 18/172 (10%)
Query: 373 RVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREE 431
R AT+K V + RGT T +GC IA E + C T+FATH+H + +
Sbjct: 735 RTATEKSLV--IIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAESL 792
Query: 432 PNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAF 491
V +M+ + D D LY++ PG+ KSFG VA LA PE VV+ V
Sbjct: 793 ATVKNCHMAAVADA-----DNFTLLYQVRPGVMEKSFGIQVARLASFPEHVVQNAQEVYN 847
Query: 492 QMEARHNLRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQTKKDLEDL 543
+ E H +Q K +K +E++Q A+E + + + T ++EDL
Sbjct: 848 EFEDEHAGKQ----------KEEDKALLEKIQVAIEQLSTAGNNTDINVEDL 889
>gi|164657614|ref|XP_001729933.1| hypothetical protein MGL_2919 [Malassezia globosa CBS 7966]
gi|159103827|gb|EDP42719.1| hypothetical protein MGL_2919 [Malassezia globosa CBS 7966]
Length = 1172
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 37/77 (48%), Positives = 47/77 (61%), Gaps = 2/77 (2%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
Y FL I D D P +Y+ +TLY+PP K TP Q+W IK Q++D VLFF+
Sbjct: 263 YDFLL--DIRDKDMNRPGDMNYDKRTLYIPPSAWKSFTPFEKQFWEIKQQHWDTVLFFQK 320
Query: 230 GKFYELFHMDAVIGADE 246
GKFYEL+ DA+IG E
Sbjct: 321 GKFYELYEEDALIGHRE 337
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 4/94 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L + + CL F THY ++A+ L P +A +M E + +D
Sbjct: 1032 RGTSTFDGQAIAYAVLYHLVARSQCLCFFMTHYTTMAQSLDTYPRLANRHM---EVRVDD 1088
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDV 482
+VF Y+LVPG+ S+G VA +AG+P D+
Sbjct: 1089 EHRHVVFTYRLVPGVAESSYGTQVAHIAGVPADI 1122
>gi|302692610|ref|XP_003035984.1| hypothetical protein SCHCODRAFT_52102 [Schizophyllum commune H4-8]
gi|300109680|gb|EFJ01082.1| hypothetical protein SCHCODRAFT_52102 [Schizophyllum commune H4-8]
Length = 1152
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 45/117 (38%), Positives = 64/117 (54%), Gaps = 5/117 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREE--PNVAFEYMSYIEDKR 446
RGT T DG IA T+ L + C T+F THY VA L ++ V +M+Y D R
Sbjct: 934 RGTSTFDGMAIADATMHYLLSEKHCKTLFITHYPLVATNLEQKFMKEVENLHMAYRADLR 993
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGT--TVAFQMEARHNLRQ 501
DG I FLY+L GI +SFG LAG+PE V++ + + +FQ+E +++
Sbjct: 994 IDGTREITFLYRLTSGITSESFGVECGRLAGLPETVLRTASQRSQSFQVEVEARMKR 1050
>gi|320593113|gb|EFX05522.1| DNA mismatch repair protein [Grosmannia clavigera kw1407]
Length = 1190
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 30/67 (44%), Positives = 45/67 (67%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+I+D +R P HPD++ T++VPP K +P Q+W IK + +D ++FFK GKF+EL+
Sbjct: 273 NIMDMNRNKPGHPDFDKSTVFVPPNAWNKFSPFEKQYWEIKQKLWDTIVFFKKGKFFELY 332
Query: 237 HMDAVIG 243
DA IG
Sbjct: 333 ENDATIG 339
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 38/112 (33%), Positives = 56/112 (50%), Gaps = 4/112 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IGC+ FATHYHS+A P + + M + D N
Sbjct: 1034 RGTSSYDGVAVAQAVLHHVASHIGCVGFFATHYHSLATEFENHPEICAKRMQILVDNEN- 1092
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR 500
+ FLY+L G+ SFG + A + GIP+ V++ A + E L+
Sbjct: 1093 --RRVTFLYRLEDGVAEGSFGMHCAAMCGIPDRVIEEAEVAAREWEHTSRLK 1142
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 28/85 (32%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 277 GCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQC 336
PD++E L Y++ AFD K A +IP+ G+D+++DE D I I+ ++Q+ L
Sbjct: 731 AAMPDLNEPLSYWKTAFDRKRAREDKLLIPERGIDEDFDECADAITGIKGKLQSVLERSK 790
Query: 337 AHFGC-TVIYSEAQKKQKKYVLEVP 360
A C +++ K + Y +EVP
Sbjct: 791 AELKCRNAKFTDVGK--EIYQVEVP 813
>gi|302823252|ref|XP_002993280.1| hypothetical protein SELMODRAFT_136810 [Selaginella moellendorffii]
gi|300138950|gb|EFJ05701.1| hypothetical protein SELMODRAFT_136810 [Selaginella moellendorffii]
Length = 942
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPN-VAFEYMSYIEDKRN 447
RGT T+DG IA TL LQ + C T+F THY +V ++ P V +MSY+ +
Sbjct: 778 RGTSTHDGVAIAYATLHHLLQEVQCFTLFVTHYLNVTEVVKLFPGRVQAYHMSYLAESPE 837
Query: 448 DGIDT---------IVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
+D + FLYKL PG +SFG NVA LA +PE V
Sbjct: 838 GDLDKSSVQEAAQKVTFLYKLQPGAASRSFGINVARLAKVPESCV 882
>gi|224136986|ref|XP_002322465.1| predicted protein [Populus trichocarpa]
gi|222869461|gb|EEF06592.1| predicted protein [Populus trichocarpa]
Length = 1092
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 46/115 (40%), Positives = 67/115 (58%), Gaps = 9/115 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEP-NVAFEYMSYIEDKRN 447
RGT T DG IA TL L Q C+ +F THY + E P +V ++SY+ +++
Sbjct: 898 RGTSTYDGEAIAYATLYHLLDQKRCMVLFVTHYPKIVEIKTEFPGSVGAYHVSYLTSEKS 957
Query: 448 DGI-----DT--IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
+G DT + +LYKLVPG+ KSFGF VA+LA +P ++ T +A ++EA
Sbjct: 958 EGAIESTCDTEDVTYLYKLVPGVSEKSFGFKVAQLAELPPSCIRRATIMAARLEA 1012
>gi|448119263|ref|XP_004203689.1| Piso0_000705 [Millerozyma farinosa CBS 7064]
gi|359384557|emb|CCE78092.1| Piso0_000705 [Millerozyma farinosa CBS 7064]
Length = 1008
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 60/107 (56%), Gaps = 8/107 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGC--LTVFATHYHSVARRLREEPNVAFEY-MSYIED-K 445
RGTGTNDG IA L ++ LT+F TH+ S+ + + Y M Y+E+ K
Sbjct: 862 RGTGTNDGIAIAFSVLNYLIEDSAKPLTLFITHFPSLHVFEQNYIGIVSNYHMGYVENYK 921
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQ 492
+ ++FLY LV G+ KS+G NVA LAGIP +V++ AFQ
Sbjct: 922 KGQEFPEVLFLYNLVKGVVSKSYGLNVANLAGIPNSIVRY----AFQ 964
>gi|195033817|ref|XP_001988769.1| GH11346 [Drosophila grimshawi]
gi|193904769|gb|EDW03636.1| GH11346 [Drosophila grimshawi]
Length = 918
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 56/177 (31%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 373 RVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREE 431
R AT K V + RGT T +GC IA E + C T+FATH+H + +
Sbjct: 736 RTATDKSLV--IIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAETL 793
Query: 432 PNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAF 491
P V +M+ + DK D LY++ G+ KSFG VA LA PE VV+ V
Sbjct: 794 PTVKNCHMAAVADK-----DNFTLLYQVRAGVMEKSFGIQVARLANFPEHVVQNAQEVYN 848
Query: 492 QMEARHNLRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQTKKDLEDLPGGVA 548
+ E H +Q +K ++++Q A+E + + + T ++EDL VA
Sbjct: 849 EFEDEHAGKQ----------SQEDKALLDKIQVAIEQLSTAGNNTDINVEDLTQLVA 895
>gi|71397186|ref|XP_802464.1| mismatch repair protein MSH3 [Trypanosoma cruzi strain CL Brener]
gi|70863233|gb|EAN81018.1| mismatch repair protein MSH3, putative [Trypanosoma cruzi]
Length = 571
Score = 74.3 bits (181), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/101 (41%), Positives = 54/101 (53%), Gaps = 7/101 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVA----RRLREEPNVAFEYMSYIEDK 445
RGT + DG +A TLE LQ G +F THY + E V+ YM + E++
Sbjct: 464 RGTSSFDGIAVAAATLEYLLQRGTTMLFVTHYSHLCEPYLHNTSEGKQVSCYYMGFSEEQ 523
Query: 446 RNDGIDT---IVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
DG D +VF YK PG+ P SFG VA +AG+P DVV
Sbjct: 524 DEDGGDGEPKLVFTYKPTPGVTPSSFGVRVARMAGLPHDVV 564
>gi|167627358|ref|YP_001677858.1| DNA mismatch repair protein MutS [Francisella philomiragia subsp.
philomiragia ATCC 25017]
gi|189030724|sp|B0TX99.1|MUTS_FRAP2 RecName: Full=DNA mismatch repair protein MutS
gi|167597359|gb|ABZ87357.1| DNA mismatch repair protein MutS [Francisella philomiragia subsp.
philomiragia ATCC 25017]
Length = 848
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 11/97 (11%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEP---NVAFEYMSYIEDKR 446
RGT T DG +A+ EKF +IG +T+FATHY + + + P N+ FE Y
Sbjct: 693 RGTSTFDGLSLAKACAEKFAKIGAMTLFATHYFELTELVNQYPNTKNIHFEAKEY----- 747
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
D I F++K V G KS+G VA+LAGI +DV+
Sbjct: 748 ---KDNIYFMHKAVAGAAKKSYGIQVAKLAGISKDVL 781
Score = 46.2 bits (108), Expect = 0.049, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 31/56 (55%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGES 261
TP + Q+ IKSQ D +LF+++G FYELF DA A+ L + G+S
Sbjct: 7 HTPMIQQYLKIKSQYPDILLFYRMGDFYELFFDDAKNAAELLDITLTARGKSNGDS 62
>gi|393238523|gb|EJD46059.1| hypothetical protein AURDEDRAFT_87246 [Auricularia delicata
TFB-10046 SS5]
Length = 960
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/94 (43%), Positives = 56/94 (59%), Gaps = 4/94 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEP--NVAFEYMSYIEDKR 446
RGT T DG IA LE F+ + C +F THY VA L+E+ +V+ +M ++E +
Sbjct: 843 RGTSTFDGMAIASAVLEHFVTETSCKVLFITHYPHVATSLQEKYPFDVSVAHMGFVESEG 902
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPE 480
DG+ TI FLY+L PG+ SFG LAG+PE
Sbjct: 903 LDGVRTIHFLYQLKPGLAG-SFGIECGRLAGLPE 935
>gi|190346907|gb|EDK39095.2| hypothetical protein PGUG_03193 [Meyerozyma guilliermondii ATCC
6260]
Length = 1198
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 72/248 (29%), Positives = 117/248 (47%), Gaps = 23/248 (9%)
Query: 10 EKKGDSESSTPASSKGKKTSKSPAKSEDDSPVTKRPRRKSAKRVKSA------IQSDSEP 63
E K E S+P S +G+ + DD VT +RK +R+ + +++
Sbjct: 112 EPKRPQEGSSPLSKRGRARKSTSYAESDDEDVT--VKRKKTRRIDDSDDDEDEFKAEDLS 169
Query: 64 DDMLQDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDP---TPSSSEAEVTPMKNGNK 120
DD + D+ P AE + E S EEE+ + + P +P +S + V+ + N
Sbjct: 170 DDDDDMSDFIDDEAEPSAEEAEDIEISDAEEEVVKPRKKPRKSSPKNSPSPVSTTETTNV 229
Query: 121 RGLSSKSGQP-TKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHIL 179
G K+G + +PK A V+ +++ P ++ YQ+L ++
Sbjct: 230 LGEKFKAGSSYSAQPKQVATKL-------VTKAAKSPPKNFAKEN--EERYQWLV--NVR 278
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
DA++R+ P+Y+P+TLY+P K T Q+W IK +D V+FFK GKFYEL+ D
Sbjct: 279 DAEKRTMDDPNYDPRTLYIPQSAWSKFTAFEKQYWEIKGVMWDTVVFFKKGKFYELYEND 338
Query: 240 AVIGADEL 247
A I E
Sbjct: 339 ATIANSEF 346
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L + L FATHY S+ P + M+ + D+ +
Sbjct: 1036 RGGSSSDGFAIAEAVLHHLATHVQPLGFFATHYGSLVLSFEGHPQIRPLRMAIVIDQNSR 1095
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
I FLYKL G P SFG NVA + GI ++V A + E
Sbjct: 1096 NI---TFLYKLEDGTAPGSFGMNVAAMCGISSEIVDQAEVAAIKYE 1138
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 32/114 (28%), Positives = 60/114 (52%), Gaps = 7/114 (6%)
Query: 279 FP-DMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCA 337
FP ++ + +E+AFD EA + ++P GVD+ +D D +K +E + +LR
Sbjct: 735 FPTELKSCVNEWEDAFDRSEALN-DVVVPATGVDESFDASSDRMKKLEDILNEHLRKYKK 793
Query: 338 HFGCT-VIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
+ + Y ++ K+ Y++EVP+K + HQ +T K V+ + +PE +
Sbjct: 794 EYRSNEICYKDSGKEI--YLIEVPNKVKNIPSDWHQMGSTSK--VKRFWSPEVK 843
>gi|320163391|gb|EFW40290.1| mismatch repair protein Msh6 [Capsaspora owczarzaki ATCC 30864]
Length = 1363
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 32/71 (45%), Positives = 44/71 (61%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
++ D R P P Y+P+TL++PP K TP Q+WTIK ++D V+FFK GKFYE +
Sbjct: 376 NVKDGSGRLPTDPAYDPRTLFIPPSAWAKFTPFEKQYWTIKKDHWDTVVFFKKGKFYEFY 435
Query: 237 HMDAVIGADEL 247
DA+I E
Sbjct: 436 EKDALIAHREF 446
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/119 (35%), Positives = 59/119 (49%), Gaps = 16/119 (13%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREE------------PNVAF 436
RGT T DG IA L +I C +F+THYH + + +E P V
Sbjct: 1224 RGTSTFDGYSIAYSVLHHLSHEIRCRALFSTHYHMLTDEVIDEQQREMQQTGSSVPIVGL 1283
Query: 437 EYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
+M+ + D +G + FLYKL G+C KS G NVA +AG+P +V+ A + EA
Sbjct: 1284 AHMACLVD---EGKREVTFLYKLTDGVCNKSHGMNVANMAGLPSEVIDRAEQKAAEFEA 1339
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 64/119 (53%), Gaps = 5/119 (4%)
Query: 277 GCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYL-RTQ 335
GCFPD+S LL + AFD + A G++IP AGVD++YD+ ++++ +E ++Q +L Q
Sbjct: 915 GCFPDLSGLLTELDAAFDQRLAKEQGSLIPFAGVDEDYDKACEDVRVLETKLQDHLVEVQ 974
Query: 336 CAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECRGTGT 394
T+ Y + +KY LEVP + + +TK V + TP R T T
Sbjct: 975 RLLKDRTIAYRDI--GNEKYQLEVPVRITDVPGDWDFKSSTKA--VRRFWTPLIRKTVT 1029
>gi|195973736|gb|ACG63433.1| DNA mismatch repair protein MutS [Francisella philomiragia]
Length = 776
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 55/97 (56%), Gaps = 11/97 (11%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEP---NVAFEYMSYIEDKR 446
RGT T DG +A+ EKF +IG +T+FATHY + + + P N+ FE Y
Sbjct: 671 RGTSTFDGLSLAKACAEKFAKIGAMTLFATHYFELTELVNQYPNTKNIHFEAKEY----- 725
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
D I F++K V G KS+G VA+LAGI +DV+
Sbjct: 726 ---KDNIYFMHKAVAGAAKKSYGIQVAKLAGISKDVL 759
>gi|302772959|ref|XP_002969897.1| hypothetical protein SELMODRAFT_30474 [Selaginella moellendorffii]
gi|300162408|gb|EFJ29021.1| hypothetical protein SELMODRAFT_30474 [Selaginella moellendorffii]
Length = 876
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 56/105 (53%), Gaps = 11/105 (10%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPN-VAFEYMSYIEDKRN 447
RGT T+DG IA TL LQ + C T+F THY +V ++ P V +MSY+ +
Sbjct: 755 RGTSTHDGVAIAYATLHHLLQEVQCFTLFVTHYLNVTEVVKLFPGRVQAYHMSYLAESPE 814
Query: 448 DGIDT---------IVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
+D + FLYKL PG +SFG NVA LA +PE V
Sbjct: 815 GDLDKSSVQEAAQKVTFLYKLQPGAASRSFGINVARLAKVPESCV 859
>gi|297569846|ref|YP_003691190.1| DNA mismatch repair protein MutS [Desulfurivibrio alkaliphilus
AHT2]
gi|296925761|gb|ADH86571.1| DNA mismatch repair protein MutS [Desulfurivibrio alkaliphilus
AHT2]
Length = 884
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/133 (37%), Positives = 65/133 (48%), Gaps = 22/133 (16%)
Query: 380 NVENYVTPEC--------RGTGTNDGCVIARVTLEKFLQIG---CLTVFATHYHSVARRL 428
N+ N TP+ RGT T DG IA E +Q G T+FATHYH +
Sbjct: 696 NILNNATPQSLVILDEIGRGTSTFDGLAIAWAVAEALVQKGGKGVKTMFATHYHELTELA 755
Query: 429 REEPNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTT 488
EP + +++ E DTIVFL+KL+PG +S+G VA LAG+P T
Sbjct: 756 ATEPRIHNFHIAVREWN-----DTIVFLHKLLPGGVSRSYGIQVAALAGVP------ATV 804
Query: 489 VAFQMEARHNLRQ 501
VA E HN+ Q
Sbjct: 805 VARAKELLHNIEQ 817
Score = 45.1 bits (105), Expect = 0.094, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 30/47 (63%)
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSY 251
K TP + Q+ IK+Q+ + +LF+++G FYE+F DAV A L +
Sbjct: 2 KITPMLQQYLEIKNQHSEAILFYRMGDFYEMFFDDAVEAARILGITL 48
>gi|223998478|ref|XP_002288912.1| predicted protein [Thalassiosira pseudonana CCMP1335]
gi|220976020|gb|EED94348.1| predicted protein [Thalassiosira pseudonana CCMP1335]
Length = 338
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 66/112 (58%), Gaps = 7/112 (6%)
Query: 373 RVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREE 431
R +TK+ + + RGT T DG +A+ E +Q IGC+TVFATH+H + +E
Sbjct: 219 RTSTKRSLI--IIDELGRGTSTFDGFGLAKAISEHVVQKIGCMTVFATHFHELTALEEQE 276
Query: 432 PNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
+V ++S DK+N + FLY++ PG C +SFG VAE+A +P +++
Sbjct: 277 ASVTNCHVSAHSDKQNG----LTFLYEVRPGPCLESFGIQVAEMANMPSNII 324
>gi|298242708|ref|ZP_06966515.1| DNA mismatch repair protein MutS [Ktedonobacter racemifer DSM
44963]
gi|297555762|gb|EFH89626.1| DNA mismatch repair protein MutS [Ktedonobacter racemifer DSM
44963]
Length = 893
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 43/106 (40%), Positives = 63/106 (59%), Gaps = 4/106 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IAR +E ++ T+FATHYH +A E P++ M+ I D+ D
Sbjct: 700 RGTSTYDGLAIARAVVEHLHSRLKARTLFATHYHELAALAEELPHLCVHAMA-ISDE--D 756
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+IVFL+K+V G KS+G +VA LAG+P +V+ + +Q+E
Sbjct: 757 EHASIVFLHKVVEGSAGKSYGVHVARLAGMPMSIVERAEEILYQLE 802
>gi|354491562|ref|XP_003507924.1| PREDICTED: DNA mismatch repair protein Msh3 [Cricetulus griseus]
Length = 1075
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 14/151 (9%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEP-NVAFEYMSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + P V +M ++ E
Sbjct: 923 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKCYPEQVGNYHMGFLVDEDE 982
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K+ G D++ FLY++ GI +S+G NVA+LA +P +++K + ++E N
Sbjct: 983 SKQESGNMEQVPDSVTFLYQITRGIASRSYGLNVAKLADVPGEILKKAAHKSKELEGLVN 1042
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQKALESV 529
LR+ + F L + DV++L +E +
Sbjct: 1043 LRRKRLKYFTDLWTTH---DVKDLHTCIEDL 1070
>gi|300088042|ref|YP_003758564.1| DNA mismatch repair protein MutS [Dehalogenimonas
lykanthroporepellens BL-DC-9]
gi|299527775|gb|ADJ26243.1| DNA mismatch repair protein MutS [Dehalogenimonas
lykanthroporepellens BL-DC-9]
Length = 852
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 51/164 (31%), Positives = 82/164 (50%), Gaps = 19/164 (11%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IAR +E IG T+FATHYH + V ++ ED+
Sbjct: 694 RGTSTYDGLAIARAVVEYIHDHIGARTLFATHYHELVGLGDSLEGVRNCNVAVSEDR--- 750
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN---------- 498
+VFL+++VPG +S+G +VA+LAG+P+ V++ V ++EAR
Sbjct: 751 --GEVVFLHRIVPGGVDRSYGIHVAKLAGLPKAVIRRANEVLLELEARKKSPMPPAKSPA 808
Query: 499 -LRQLFIHKFASLVKSGEKVDVEEL--QKALESVKSFESQTKKD 539
LF + V++ ++D++ L ++ALE + + Q D
Sbjct: 809 PQLALFAPTVSPAVEALRQLDIDALSPRQALEKLYELKEQADSD 852
>gi|353241684|emb|CCA73482.1| related to MSH6-DNA mismatch repair protein [Piriformospora indica
DSM 11827]
Length = 1265
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 34/74 (45%), Positives = 47/74 (63%), Gaps = 2/74 (2%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
Y FL + + D D R P Y+P++LY+P E K+ TP Q+W IK ++D +LFF+
Sbjct: 314 YGFL--EDVRDKDNRRPTDEGYDPRSLYIPKEAWKEFTPFETQFWEIKRDHYDTILFFQK 371
Query: 230 GKFYELFHMDAVIG 243
GKFYEL+ DA IG
Sbjct: 372 GKFYELYEDDARIG 385
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/102 (38%), Positives = 55/102 (53%), Gaps = 4/102 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L L+ FATHY ++ N++ +M+ D N
Sbjct: 1100 RGTSTFDGIAIAGAVLHHLATHTLALSFFATHYSTLTNDYAYHQNISMMHMATGFDDENR 1159
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
+++LYKLV G+ P SFG +VA LAG+P+DVV+ V+
Sbjct: 1160 ---ELIWLYKLVEGVAPSSFGTHVASLAGVPKDVVERADVVS 1198
>gi|453082233|gb|EMF10281.1| DNA mismatch repair protein MSH3 [Mycosphaerella populorum SO2202]
Length = 1135
Score = 73.9 bits (180), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 49/154 (31%), Positives = 79/154 (51%), Gaps = 15/154 (9%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI-GCLTVFATHYHSVARRLREEPNVA--------FEYMS 440
RGT T+DG IA+ L+ + + LT+F THY S+AR + + NVA +M+
Sbjct: 983 RGTSTHDGVAIAQSVLQHMVMVQKSLTLFITHYQSMAR-IADSMNVADGEAKPLKNVHMT 1041
Query: 441 YIED---KRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARH 497
+ E+ K + I FLY++ G+ +S+G NVA LAG+P+ ++ + ME
Sbjct: 1042 FTENTASKADAAEKEITFLYEVGEGVAHRSYGLNVARLAGLPKSLLDEAARRSKAMEEEE 1101
Query: 498 NLRQL--FIHKFASLVKSGEKVDVEELQKALESV 529
R++ A LV G +V +E L +E +
Sbjct: 1102 ARRRVTYLAKALAGLVSEGSEVALERLVNGIEQL 1135
>gi|403178118|ref|XP_003336563.2| hypothetical protein PGTG_17874 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
gi|375173346|gb|EFP92144.2| hypothetical protein PGTG_17874 [Puccinia graminis f. sp. tritici CRL
75-36-700-3]
Length = 1135
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 47/143 (32%), Positives = 70/143 (48%), Gaps = 21/143 (14%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L + CL FATHY ++ R N+A +YM D+
Sbjct: 967 RGTSTFDGHAIAFAVLHRLATHSNCLGFFATHYSALTEDFRAHANIATKYMLTNVDEVTR 1026
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME-------------A 495
+VFLYKL G+ P+S+G +VA++AGIP +V+ +++ + E +
Sbjct: 1027 ---EVVFLYKLSSGVSPRSYGPHVAKMAGIPSKIVQRAISISEKFEKETKDRTELSAKQS 1083
Query: 496 RHNLRQLFIHK----FASLVKSG 514
H L L + +LVK+G
Sbjct: 1084 NHRLLNLVLQADTAFLINLVKNG 1106
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 28/88 (31%), Positives = 39/88 (44%), Gaps = 13/88 (14%)
Query: 160 SGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQ 219
+G W + FL I DAD P+Y+P+TL++ + TP Q+W IK
Sbjct: 199 TGEAPWKQGPWAFLR--DIKDADGNPMGSPEYDPRTLFISKKDWASMTPFEVQFWEIKR- 255
Query: 220 NFDCVLFFKVGKFYELFHMDAVIGADEL 247
KF EL+ DA+IG E
Sbjct: 256 ----------SKFAELYEGDALIGHQEF 273
>gi|358377989|gb|EHK15672.1| hypothetical protein TRIVIDRAFT_56280 [Trichoderma virens Gv29-8]
Length = 1095
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 62/114 (54%), Gaps = 1/114 (0%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T+DG IA+ L + + CLT+F THY ++AR V +M + +D
Sbjct: 954 RGTSTHDGAAIAQSVLHYVVTETRCLTLFITHYQNLARVADGLLGVTNVHMKFNAQTGDD 1013
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
G + I FLY++ GI +S+G NVA LA IP+ V+ + ++E R+L
Sbjct: 1014 GEEEITFLYEVGEGIAHRSYGLNVARLARIPKKVLDVAADKSKELENEMRRRRL 1067
>gi|195338423|ref|XP_002035824.1| GM15583 [Drosophila sechellia]
gi|194129704|gb|EDW51747.1| GM15583 [Drosophila sechellia]
Length = 566
Score = 73.6 bits (179), Expect = 2e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 373 RVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREE 431
R AT K V + RGT T +GC IA E + C T+FATH+H + +
Sbjct: 384 RTATDKSLV--IIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAETL 441
Query: 432 PNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAF 491
P V +M+ + D D LY++ PG+ KSFG VA LA PE VV+ V
Sbjct: 442 PTVKNCHMAAVADA-----DDFTLLYQVRPGVMEKSFGIQVARLANFPEHVVQNAQEVYN 496
Query: 492 QMEARHNLRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQTKKDLEDL 543
+ E H +Q K +K +E++Q A++ + + + ++EDL
Sbjct: 497 EFEDEHVDKQ----------KKEDKALLEKIQVAIQQLSTAGNNVDINVEDL 538
>gi|255725426|ref|XP_002547642.1| hypothetical protein CTRG_01949 [Candida tropicalis MYA-3404]
gi|240135533|gb|EER35087.1| hypothetical protein CTRG_01949 [Candida tropicalis MYA-3404]
Length = 1015
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 50/145 (34%), Positives = 83/145 (57%), Gaps = 10/145 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYHSVARRLREEPN-VAFEYMSYIE--- 443
RGTGT DG +A L+ ++ + + F TH+ S++ E P VA +M Y E
Sbjct: 872 RGTGTTDGISLAYSILKYLIECELKPVLFFITHFPSISVLENEHPQEVANFHMGYEEVYN 931
Query: 444 DKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
D ++GI I+FLY L G+ S+G NVA+LAG+P++++ + ++ +++A L+ +
Sbjct: 932 DDESEGIPEIIFLYNLCRGVVNNSYGLNVAKLAGVPKELILKASVISEKLKADIELKDHW 991
Query: 504 IHKFASLVKSGEK--VDVEELQKAL 526
KFA +VK K +D++ L K L
Sbjct: 992 --KFAQMVKKFLKNELDIDSLLKYL 1014
>gi|312135299|ref|YP_004002637.1| DNA mismatch repair protein muts [Caldicellulosiruptor owensensis
OL]
gi|311775350|gb|ADQ04837.1| DNA mismatch repair protein MutS [Caldicellulosiruptor owensensis
OL]
Length = 863
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 65/120 (54%), Gaps = 12/120 (10%)
Query: 390 RGTGTNDGCVIARVTLEKFL---QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG IA LE +IG T+FATHYH + P V +Y D +
Sbjct: 690 RGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELTELEERIPGVK----NYRVDVK 745
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA----RHNLRQL 502
+G ++FL K+V G C S+G +VA LAGIPEDV+K + Q+E R ++R+L
Sbjct: 746 EEG-KNVIFLRKIVRGGCDSSYGIHVARLAGIPEDVLKRAEEILKQLEEADINRKSIRKL 804
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+++ TP M Q+ IK + DC+LFF++G FYE+F DA++ + EL +
Sbjct: 1 MQELTPMMQQYMEIKQKVKDCILFFRLGDFYEMFFEDAIVASKELEIA 48
>gi|156377857|ref|XP_001630862.1| predicted protein [Nematostella vectensis]
gi|156217891|gb|EDO38799.1| predicted protein [Nematostella vectensis]
Length = 886
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 44/115 (38%), Positives = 65/115 (56%), Gaps = 9/115 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEP-NVAFEYMSYIEDKRN 447
RGT T+DG IA TL F+ Q LT+F THY S+A R P +V +M+++ +
Sbjct: 766 RGTSTHDGVAIAYATLRHFIDQTHSLTLFVTHYPSLAELERIFPGHVTNNHMAFMTSDGD 825
Query: 448 D-----GIDT--IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
+DT + FLY+LV G+ +S+G NVA LAGIP ++V + +E+
Sbjct: 826 TELASVAMDTPAVTFLYELVRGVAARSYGLNVARLAGIPINIVAMAAGKSHDLES 880
>gi|403350104|gb|EJY74495.1| MutS domain III family protein [Oxytricha trifallax]
Length = 1292
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 49/71 (69%)
Query: 172 FLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGK 231
F ++I D + R P DY+P TL++P + LK TP M ++W IKS+NFD ++F++ G+
Sbjct: 317 FTWKEYIRDLEGRRPDEEDYDPSTLFIPDQDLKNMTPGMQKYWEIKSKNFDKIVFYRWGE 376
Query: 232 FYELFHMDAVI 242
++ L++ D+VI
Sbjct: 377 WFILYYQDSVI 387
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 53/100 (53%), Gaps = 7/100 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARR-LREEPNVAFEYM-SYIEDKR 446
RGT T DG IA L I C T+F THYH + + + V +M S E+K
Sbjct: 1173 RGTSTFDGYSIAHSVLSYIANTIKCRTLFTTHYHMLVDDFVHMQDRVGLYHMKSSFEEKE 1232
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
N + F YK +PG+ P+S+G VA+LAGI E V++
Sbjct: 1233 N----KVEFKYKFMPGVAPQSYGIYVAKLAGINERVLELA 1268
Score = 38.9 bits (89), Expect = 7.5, Method: Compositional matrix adjust.
Identities = 24/106 (22%), Positives = 48/106 (45%)
Query: 273 QTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYL 332
Q FPD +LK FE+ K P G+D+E+D D+++ ++++I+ ++
Sbjct: 843 QEEQSIFPDYRPILKEFEDMITWKTIGKKKIPEPIQGLDEEFDRANDKVERVKEKIEKHI 902
Query: 333 RTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK 378
+ I + +Y +EVP + K ++ + +T K
Sbjct: 903 EVVRKELKSSSINYSTGSMRFRYEIEVPEELTKKVPDHYTQTSTAK 948
>gi|309791040|ref|ZP_07685576.1| DNA mismatch repair protein MutS [Oscillochloris trichoides DG-6]
gi|308226895|gb|EFO80587.1| DNA mismatch repair protein MutS [Oscillochloris trichoides DG6]
Length = 996
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 42/109 (38%), Positives = 62/109 (56%), Gaps = 8/109 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL---QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG IAR +E Q+ C T+FATHYH + E V +M+ IE +
Sbjct: 825 RGTSTYDGMAIARAVVEYIHNEPQLQCRTLFATHYHELTALEHELDRVRNLHMAAIEQGK 884
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
+ +VFL++L G +S+G +VAELAGIP V++ + + ++EA
Sbjct: 885 H-----VVFLHQLREGGADRSYGIHVAELAGIPRPVIQRASELLAELEA 928
>gi|384495958|gb|EIE86449.1| hypothetical protein RO3G_11160 [Rhizopus delemar RA 99-880]
Length = 964
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 65/229 (28%), Positives = 107/229 (46%), Gaps = 29/229 (12%)
Query: 36 EDDSPVTKRPRRKSAKRVKSAIQSDSEPDD----------------MLQDNGSEDEYVPP 79
E D PVT ++++ RV S ++DSE ++ ++D+ S++E+ P
Sbjct: 2 EVDQPVTDHSQKRARGRV-SYKETDSEEENETIKPQSSGKRRRLVRRIEDD-SDEEFTPS 59
Query: 80 KAEVESESEHSS-----GEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKP 134
+ E E + + EL E D + ++ +TP+ +R S S
Sbjct: 60 AKDKEKADEDDAMFDDISDTELMEIERDYAATKNKTAMTPIAEKFER--VSVSSPSRPTT 117
Query: 135 KLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPK 194
S P PV+ S+ ++ + + YQ+L I DAD+ PDY+P+
Sbjct: 118 SSLFSSGGHKP--PVTTQSKQQDRNQKFKEKNESRYQWLQ--DIKDADKNPVDSPDYDPR 173
Query: 195 TLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
TL++P TP Q+W +K +++D V+FFK GKFYEL+ DA IG
Sbjct: 174 TLFIPSSAWSLFTPFEKQYWEVKCKHWDTVVFFKKGKFYELYEKDADIG 222
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%), Gaps = 1/51 (1%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYM 439
RGT T+DG IA L IGCL +FATHY ++ + P + +M
Sbjct: 914 RGTSTHDGYAIAYAVLHNLCTHIGCLGIFATHYQALCKEFERNPEINNMHM 964
Score = 42.4 bits (98), Expect = 0.70, Method: Compositional matrix adjust.
Identities = 29/116 (25%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Query: 246 ELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNII 305
E + +KES +S L++Q+ + Q P+ P + +L F A + +I
Sbjct: 594 ENVINILKESQSQLKSNLISQMID---QFPN-IDPILDDLNSLFITADVDMDYQKVKAMI 649
Query: 306 PKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVP 360
PK+G ++ +D++M++I +++ + Q++L + C +++Y + K Y +EVP
Sbjct: 650 PKSGKNEAWDDIMNQIDAVQNQFQSHLNSLKKQLKCPSILYRDLGK--DIYQIEVP 703
>gi|255954341|ref|XP_002567923.1| Pc21g08840 [Penicillium chrysogenum Wisconsin 54-1255]
gi|211589634|emb|CAP95781.1| Pc21g08840 [Penicillium chrysogenum Wisconsin 54-1255]
Length = 1130
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 63/110 (57%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFE--YMSYIE--D 444
RGT T+DG IA+ L+ ++ I LT+F THY ++R + P+ A +M + E +
Sbjct: 975 RGTSTHDGVAIAQAVLDHMVRSIQSLTLFITHYQHLSRMVHSFPDKALRNVHMRFTETGN 1034
Query: 445 KRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
K DG + I FLY++ G+ +S+G NVA LA +P V+ + ++E
Sbjct: 1035 KDKDGDEEITFLYEVAEGVAHRSYGLNVARLANLPPAVIDIARQKSAELE 1084
>gi|395511357|ref|XP_003759926.1| PREDICTED: DNA mismatch repair protein Msh3 [Sarcophilus harrisii]
Length = 1038
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/151 (31%), Positives = 84/151 (55%), Gaps = 12/151 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPN-VAFEYMSYI--ED- 444
RGT T+DG IA TLE F++ + LT+F THY V + P V +M ++ ED
Sbjct: 887 RGTSTHDGIAIAYATLEHFIRDVESLTLFVTHYPPVCELEKTYPQWVGNYHMGFLVNEDE 946
Query: 445 ------KRNDGI-DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARH 497
+ ++ I D + FLY++ G+ +S+G NVA+LA +PE+++K + ++E
Sbjct: 947 STQKPGQEDEEIPDFVTFLYQITRGVASRSYGLNVAKLADVPEEILKKAAYKSKELERLV 1006
Query: 498 NLRQLFIHKFASLVKSGEKVDVEELQKALES 528
N+++ + FA L + + +V+E +E+
Sbjct: 1007 NVKRKRLKSFAKLWNATDVTEVQEWTNTVET 1037
>gi|148668642|gb|EDL00961.1| mCG131439, isoform CRA_c [Mus musculus]
Length = 960
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 86/157 (54%), Gaps = 20/157 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEP-NVAFEYMSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + P V +M ++ E
Sbjct: 802 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKCYPEQVGNYHMGFLVNEDE 861
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K++ G D++ FLY++ GI +S+G NVA+LA +P +V++ + ++E +
Sbjct: 862 SKQDSGDMEQMPDSVTFLYQITRGIAARSYGLNVAKLADVPREVLQKAAHKSKELEGLVS 921
Query: 499 LRQLFIHKFASL-----VKS----GEKVDVEELQKAL 526
LR+ + F L VK +K+++EE+Q +L
Sbjct: 922 LRRKRLECFTDLWTTHSVKDLHTWADKLEMEEIQTSL 958
>gi|171679972|ref|XP_001904932.1| hypothetical protein [Podospora anserina S mat+]
gi|170939612|emb|CAP64839.1| unnamed protein product [Podospora anserina S mat+]
Length = 1230
Score = 73.6 bits (179), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 48/159 (30%), Positives = 73/159 (45%), Gaps = 22/159 (13%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IGC+ FATHYHS+A P + M D N
Sbjct: 1075 RGTSSYDGVAVAQAVLHHVASHIGCVGFFATHYHSLATEFENHPEIRARRMQIHVDGGNR 1134
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF----- 503
+ FLYKL G+ SFG + A + GIP V++ A + E L++
Sbjct: 1135 ---RVTFLYKLEDGVAEGSFGMHCAAMCGIPNKVIEEAEVAAKEWEHTSRLKESLERAKT 1191
Query: 504 --------IHKFASLVKSGEKVDVEE-----LQKALESV 529
+ ASL++ G + +V+E L +A+E++
Sbjct: 1192 GCYIPLGVLSDVASLLRVGGEAEVQERGVEVLLRAIEAL 1230
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 29/67 (43%), Positives = 45/67 (67%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+ILD +++ P P+++P ++Y+PP K+ + Q+W IK +D V+FFK GKFYEL+
Sbjct: 299 NILDGNKKPPTDPEFDPTSIYIPPAAEKQFSAFEKQYWDIKKNLWDTVVFFKKGKFYELY 358
Query: 237 HMDAVIG 243
DA IG
Sbjct: 359 ENDATIG 365
Score = 56.6 bits (135), Expect = 4e-05, Method: Compositional matrix adjust.
Identities = 29/84 (34%), Positives = 49/84 (58%), Gaps = 3/84 (3%)
Query: 278 CFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCA 337
C PD+ E L Y+E AFD K+A + +IP+ G++++YD DE+ I++E+ L Q
Sbjct: 756 CMPDLKEPLGYWETAFDRKKARDSKVLIPERGIEEDYDNSEDELNRIKEELAQLLEKQKT 815
Query: 338 HFGCTVI-YSEAQKKQKKYVLEVP 360
C + +++ K+ Y +EVP
Sbjct: 816 ALKCRQLKFTDVGKEV--YQIEVP 837
>gi|195115750|ref|XP_002002419.1| GI12901 [Drosophila mojavensis]
gi|193912994|gb|EDW11861.1| GI12901 [Drosophila mojavensis]
Length = 919
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 55/177 (31%), Positives = 83/177 (46%), Gaps = 18/177 (10%)
Query: 373 RVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREE 431
R AT K V + RGT T +GC IA E + C T+FATH+H + +
Sbjct: 736 RTATDKSLV--IIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAETL 793
Query: 432 PNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAF 491
V +M+ + D+ D LY++ PG+ KSFG VA LA PE VV V
Sbjct: 794 STVKNCHMAAVADE-----DNFTLLYQVRPGVMEKSFGIQVARLANFPEQVVHNAQEVYN 848
Query: 492 QMEARHNLRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQTKKDLEDLPGGVA 548
+ E H +Q +K ++++Q A+E + + + T+ ++EDL VA
Sbjct: 849 EFEDEHAGKQ----------NEADKALLDKIQVAIEQLSTAGNNTEINVEDLTQLVA 895
>gi|366990175|ref|XP_003674855.1| hypothetical protein NCAS_0B03980 [Naumovozyma castellii CBS 4309]
gi|342300719|emb|CCC68482.1| hypothetical protein NCAS_0B03980 [Naumovozyma castellii CBS 4309]
Length = 1184
Score = 73.2 bits (178), Expect = 3e-10, Method: Compositional matrix adjust.
Identities = 43/124 (34%), Positives = 63/124 (50%), Gaps = 10/124 (8%)
Query: 120 KRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHIL 179
K+ + KS P +K + P S P+ T P + Y +L +
Sbjct: 176 KKPIIKKSPTPMRKLPVPKPKRTSQPA--------TQPKAQKFNKQNEERYHWLVNEK-- 225
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
DA R+P P+Y+P+TL++P K T Q+W IKS+ +DCV+FFK GKFYEL+ D
Sbjct: 226 DAQGRAPTDPEYDPRTLHIPSSAWGKFTAFEKQYWEIKSKMWDCVVFFKKGKFYELYEKD 285
Query: 240 AVIG 243
A +
Sbjct: 286 AFLA 289
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 48/140 (34%), Positives = 64/140 (45%), Gaps = 9/140 (6%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG +NDG IA L I L FATHY S+ + P V MS + D D
Sbjct: 1009 RGGSSNDGFAIAESVLHHVATHIQSLGFFATHYASLGLSFKGHPQVKPMKMSILVD---D 1065
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
+ FLYKLVPG SFG +VA + GIP ++V A +E H R + K
Sbjct: 1066 ETRNVTFLYKLVPGQSEGSFGMHVASMCGIPSEIVDNAQVAADTLE--HTSR---LMKER 1120
Query: 509 SLVKSGEKVDVEELQKALES 528
++ G D+ + L+S
Sbjct: 1121 KMLNGGLNEDIITVPMGLQS 1140
Score = 51.6 bits (122), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 45/167 (26%), Positives = 74/167 (44%), Gaps = 25/167 (14%)
Query: 267 LCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEK 326
L Y SQ P D+ + NAFD +A IIP G++ E+D+ +D+I+ +E
Sbjct: 686 LSVYFSQIPKSLIDDVEN----WTNAFDRIKAVEENIIIPHRGIEPEFDKSLDDIQELED 741
Query: 327 EIQTYLRTQCAHF-GCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYV 385
++Q L F + Y ++ K+ Y +EVP + S+ ++A K+ + Y
Sbjct: 742 QLQDQLNLYKKRFKNSNIQYKDSGKEI--YTIEVPVSITKQIPSDWTQMAA-NKSTKRYY 798
Query: 386 TPECRGTGTNDGCVIARV---------TLEKFLQIGCLTVFATHYHS 423
+ E R V+AR LE L+I F HY++
Sbjct: 799 SEEVR--------VLARSMAEARELHKALENELKIRLCKKFDAHYNT 837
>gi|258405463|ref|YP_003198205.1| DNA mismatch repair protein MutS [Desulfohalobium retbaense DSM
5692]
gi|257797690|gb|ACV68627.1| DNA mismatch repair protein MutS [Desulfohalobium retbaense DSM
5692]
Length = 896
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 60/108 (55%), Gaps = 8/108 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIG---CLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG +A +E +Q G T+FATHYH + + P V Y +++ R
Sbjct: 705 RGTSTFDGLALAWAVVEDLVQRGHGGVRTLFATHYHELTDLEGQLPGVR-NYNIAVKEWR 763
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
D IVFL +LVPG +S+G V++LAG+P+ VVK + Q+E
Sbjct: 764 GD----IVFLRRLVPGPADRSYGIEVSQLAGVPQGVVKRAKAILAQLE 807
Score = 40.4 bits (93), Expect = 2.3, Method: Compositional matrix adjust.
Identities = 26/76 (34%), Positives = 36/76 (47%), Gaps = 12/76 (15%)
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGESTLL 264
K TP + Q+ IK D +LFF++G FYELF DA A L + TL
Sbjct: 5 KLTPMLEQYLRIKEDYPDALLFFRMGDFYELFFEDAETAARVL------------QITLT 52
Query: 265 TQLCNYESQTPSGCFP 280
++ N E++ P P
Sbjct: 53 SRNPNAETKVPMAGVP 68
>gi|426195177|gb|EKV45107.1| hypothetical protein AGABI2DRAFT_207943 [Agaricus bisporus var.
bisporus H97]
Length = 1263
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGC-LTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L + LT FATHY S+ + PN+ +MS + D D
Sbjct: 1090 RGTSTFDGMAIAGAVLHQLATHTLPLTFFATHYGSLTDDFAQHPNIRNMHMSTLVD---D 1146
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQM 493
+VFLYKL+ G+ SFG +VA LAG+P +VV+ V+ Q
Sbjct: 1147 EKKELVFLYKLIDGVAESSFGTHVANLAGVPFEVVERADIVSKQF 1191
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
Y FL + D D + P P Y+P+TL++P K+ TP Q+W IK ++D VLFF+
Sbjct: 302 YAFLQ--DVKDKDGKRPGEPGYDPRTLHIPSSAWKEFTPFEKQFWEIKQNHYDTVLFFQK 359
Query: 230 GKFYELFHMDAVIGADEL 247
GKF+EL+ DA IG E
Sbjct: 360 GKFFELYEDDARIGHQEF 377
Score = 40.8 bits (94), Expect = 1.7, Method: Compositional matrix adjust.
Identities = 35/127 (27%), Positives = 60/127 (47%), Gaps = 9/127 (7%)
Query: 270 YESQTPSGCF---PDMSELLKYFENAFDHKEAS--SAGNIIPKAGVDKEYDEVMDEIKSI 324
++S+T G P++ +K+ E F + S ++ ++P+ G D+EYD ++ EI +
Sbjct: 769 FKSKTILGLLRGAPNLIPHVKHIEEMFQRPDPSGKASDELLPQKGKDEEYDAIVAEINGV 828
Query: 325 EKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQR-VATKKKNVEN 383
E +++ L H G + Y + K L V + A KA S + TK KN
Sbjct: 829 EGKLEEALSELEDHVGFKLTYWHSATGHKDIYL-VETTVAKKAPSTWTKHSGTKAKN--R 885
Query: 384 YVTPECR 390
YV P +
Sbjct: 886 YVVPSLQ 892
>gi|387849|gb|AAB60711.1| MutS homologue; major mRNA product contains exon 1a and exon 9b;
alternative protein produced from exon 1b and exon 9b
[Mus musculus]
Length = 1091
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 86/157 (54%), Gaps = 20/157 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEP-NVAFEYMSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + P V +M ++ E
Sbjct: 933 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKCYPEQVGNYHMGFLVNEDE 992
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K++ G D++ FLY++ GI +S+G NVA+LA +P +V++ + ++E +
Sbjct: 993 SKQDSGDMEQMPDSVTFLYQITRGIAARSYGLNVAKLADVPREVLQKAAHKSKELEGLVS 1052
Query: 499 LRQLFIHKFASL-----VKS----GEKVDVEELQKAL 526
LR+ + F L VK +K+++EE+Q +L
Sbjct: 1053 LRRKRLECFTDLWMTHSVKDLHTWADKLEMEEIQTSL 1089
>gi|425772390|gb|EKV10794.1| DNA mismatch repair protein Msh3 [Penicillium digitatum Pd1]
gi|425773311|gb|EKV11670.1| DNA mismatch repair protein Msh3 [Penicillium digitatum PHI26]
Length = 1132
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 38/98 (38%), Positives = 58/98 (59%), Gaps = 4/98 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFE--YMSYIE-DK 445
RGT T+DG IA+ L+ ++ I LT+F THY ++R + P+ A +M + E DK
Sbjct: 978 RGTSTHDGVAIAQAVLDHMVRSIQSLTLFITHYQHLSRMVHSFPDHALRNVHMRFTETDK 1037
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
+G I FLY++ G+ +S+G NVA LA +P V+
Sbjct: 1038 DKEGDGEITFLYEVTEGVAHRSYGLNVARLASLPSAVI 1075
>gi|452837457|gb|EME39399.1| hypothetical protein DOTSEDRAFT_83160 [Dothistroma septosporum NZE10]
Length = 1249
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 44/147 (29%), Positives = 79/147 (53%), Gaps = 7/147 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFE--YMSYIEDK- 445
RGT T+DG IA+ L+ + Q+ T+F THY S+AR + P+ + +M + E +
Sbjct: 1103 RGTSTHDGVAIAQAVLQYVVSQLKSFTLFITHYQSLARVAEQYPDGELKNVHMRFTEKES 1162
Query: 446 -RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL-- 502
R + + FLY++ G+ +S+G NVA LAG+P+ +++ + + ME R+L
Sbjct: 1163 GRTESEQDVTFLYEVGEGVAHRSYGLNVARLAGLPQSLLEEASKRSKAMEEEEVRRRLGY 1222
Query: 503 FIHKFASLVKSGEKVDVEELQKALESV 529
L+ G+++ +E L +E +
Sbjct: 1223 LSGAVKGLLSGGDEMSLEYLVAGMEQL 1249
>gi|68299763|ref|NP_034959.2| DNA mismatch repair protein Msh3 [Mus musculus]
Length = 1095
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 86/157 (54%), Gaps = 20/157 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEP-NVAFEYMSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + P V +M ++ E
Sbjct: 937 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKCYPEQVGNYHMGFLVNEDE 996
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K++ G D++ FLY++ GI +S+G NVA+LA +P +V++ + ++E +
Sbjct: 997 SKQDSGDMEQMPDSVTFLYQITRGIAARSYGLNVAKLADVPREVLQKAAHKSKELEGLVS 1056
Query: 499 LRQLFIHKFASL-----VKS----GEKVDVEELQKAL 526
LR+ + F L VK +K+++EE+Q +L
Sbjct: 1057 LRRKRLECFTDLWTTHSVKDLHTWADKLEMEEIQTSL 1093
>gi|187956273|gb|AAI50760.1| MutS homolog 3 (E. coli) [Mus musculus]
Length = 1095
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 86/157 (54%), Gaps = 20/157 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEP-NVAFEYMSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + P V +M ++ E
Sbjct: 937 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKCYPEQVGNYHMGFLVNEDE 996
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K++ G D++ FLY++ GI +S+G NVA+LA +P +V++ + ++E +
Sbjct: 997 SKQDSGDMEQMPDSVTFLYQITRGIAARSYGLNVAKLADVPREVLQKAAHKSKELEGLVS 1056
Query: 499 LRQLFIHKFASL-----VKS----GEKVDVEELQKAL 526
LR+ + F L VK +K+++EE+Q +L
Sbjct: 1057 LRRKRLECFTDLWTTHSVKDLHTWADKLEMEEIQTSL 1093
>gi|336109998|gb|AEI16767.1| mutS protein 6 [Chamaeleo calyptratus]
Length = 339
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 28/44 (63%), Positives = 36/44 (81%)
Query: 210 MGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
M +WW +KSQ FDCV+F+KVGKFYEL+HMDAV G ++L +MK
Sbjct: 2 MRKWWELKSQYFDCVIFYKVGKFYELYHMDAVTGVNKLGLVFMK 45
>gi|363744798|ref|XP_003643127.1| PREDICTED: DNA mismatch repair protein Msh3-like [Gallus gallus]
Length = 1090
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 79/147 (53%), Gaps = 15/147 (10%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPN-VAFEYMSYIEDKRN 447
RGT T+DG IA TLE F+ + LT+F THY SV P V +M+++ +K
Sbjct: 932 RGTSTHDGIAIAYATLEHFITDVESLTLFVTHYPSVCELENVYPGKVGNYHMAFLVNKEE 991
Query: 448 ----------DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARH 497
+ + + FLY++ G+ +S+G NVA+LA IPE+++K + ++E
Sbjct: 992 SAEQKGSEEEENPEFVTFLYQITKGVTARSYGLNVAKLADIPEEILKKAAHKSKELERLV 1051
Query: 498 NLRQLFIHKFASLVKSGEKVDVEELQK 524
N+++ K S ++ + D +ELQK
Sbjct: 1052 NVKR---KKLKSFAEAWKINDFQELQK 1075
>gi|400971|sp|P13705.3|MSH3_MOUSE RecName: Full=DNA mismatch repair protein Msh3; AltName: Full=Protein
repair-1; Short=REP-1; AltName: Full=Protein repair-3;
Short=REP-3
gi|200706|gb|AAA40052.1| Citations 2 and 3 contain revisions to the original sequence in
Citation 1. The name of the gene was changed after
Citation 1 from Rep-1 to Rep-3 to avoid naming conflict
with an unrelated gene.; complete cds of major mRNA [Mus
musculus]
Length = 1091
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 86/157 (54%), Gaps = 20/157 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEP-NVAFEYMSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + P V +M ++ E
Sbjct: 933 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKCYPEQVGNYHMGFLVNEDE 992
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K++ G D++ FLY++ GI +S+G NVA+LA +P +V++ + ++E +
Sbjct: 993 SKQDSGDMEQMPDSVTFLYQITRGIAARSYGLNVAKLADVPREVLQKAAHKSKELEGLVS 1052
Query: 499 LRQLFIHKFASL-----VKS----GEKVDVEELQKAL 526
LR+ + F L VK +K+++EE+Q +L
Sbjct: 1053 LRRKRLECFTDLWMTHSVKDLHTWADKLEMEEIQTSL 1089
>gi|330790177|ref|XP_003283174.1| hypothetical protein DICPUDRAFT_52102 [Dictyostelium purpureum]
gi|325086855|gb|EGC40238.1| hypothetical protein DICPUDRAFT_52102 [Dictyostelium purpureum]
Length = 1030
Score = 73.2 bits (178), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 55/166 (33%), Positives = 90/166 (54%), Gaps = 20/166 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEY-MSYIEDK- 445
RGT T+DG +A TL KF+ + C +F THY +A+ PN+ Y M +IE K
Sbjct: 862 RGTSTHDGVALAYSTL-KFIVDEKKCFCLFVTHYPLLAQLESMYPNIIGNYHMGFIEKKV 920
Query: 446 ---RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
+ I ++FLY+LV G S+G NVA +AG+P +++K + + +M+
Sbjct: 921 ESDSENFIPKVIFLYQLVQGAAQNSYGLNVANMAGLPNEILKIASIKSNEMKET------ 974
Query: 503 FIHKFASLVKS---GEKVDVE-ELQKALES-VKSFESQTKKDLEDL 543
I K A+LV + EK +E E+++ +++ V++ S +K L L
Sbjct: 975 -ITKRANLVNNSNDNEKQKIEDEIKQTIKTWVQNSNSLSKDQLNQL 1019
>gi|289742221|gb|ADD19858.1| mismatch repair ATPase mSH6 [Glossina morsitans morsitans]
Length = 194
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 46/127 (36%), Positives = 68/127 (53%), Gaps = 22/127 (17%)
Query: 390 RGTGTNDGCVIARVTLEK--------FLQIGCLTVFATHYHS----VARRLR----EEPN 433
RGT T+DG +A + F G T+F+THYHS VA + R E+ N
Sbjct: 35 RGTSTHDGSALAGAVVSYLAKPNGRFFNGSGPRTLFSTHYHSLVDQVANKDRSTSDEDIN 94
Query: 434 ---VAFEYMSYI---EDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGT 487
+ +M+ + E + +G++ I FLYK +PG CPKS+GFN A LA +P+ V++ G
Sbjct: 95 HLCIGLGHMACMVEAESESTNGLENITFLYKFIPGACPKSYGFNAARLAMLPDKVIRLGL 154
Query: 488 TVAFQME 494
A + E
Sbjct: 155 AKAKEFE 161
>gi|171679627|ref|XP_001904760.1| hypothetical protein [Podospora anserina S mat+]
gi|170939439|emb|CAP64667.1| unnamed protein product [Podospora anserina S mat+]
Length = 925
Score = 72.8 bits (177), Expect = 4e-10, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVA-FEYMSYIEDKRN 447
RGT T DG +A E +Q IGC +FATH+H + + P V ++I R
Sbjct: 748 RGTSTYDGFGLAWAISEHIIQQIGCFALFATHFHELTALAEKYPQVQNLHVTAHITSDR- 806
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
D + LYKL PGIC +SFG +VAEL P+ VV+ A ++E
Sbjct: 807 DVKREVTLLYKLAPGICDQSFGIHVAELVRFPDKVVRMAKRKADELE 853
>gi|429963195|gb|ELA42739.1| hypothetical protein VICG_00054 [Vittaforma corneae ATCC 50505]
Length = 985
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 39/104 (37%), Positives = 57/104 (54%), Gaps = 10/104 (9%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG IAR L+ +GC+ +F+THYH + + V Y+ D+R+
Sbjct: 885 RGTSTRDGEAIARAVLDYLKTVGCMCLFSTHYHKLVENYED---VDKSYVGCKLDQRD-- 939
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK--FGTTVAF 491
I FLYK+ G+C S G +A +AGIP+++V+ FG A
Sbjct: 940 ---ITFLYKMQEGVCGDSHGLYIARMAGIPDEIVERAFGIRKAL 980
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/111 (34%), Positives = 61/111 (54%), Gaps = 7/111 (6%)
Query: 135 KLTAPSTPSTPS-FPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNP 193
K+ A + PS + DT+E + ++ Y+FL + D ++ Y+P
Sbjct: 145 KIVADYLDTNPSELTIIDTTELSSEMPQQEE----RYEFLVD--VRDKNKIRKGEDGYDP 198
Query: 194 KTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGA 244
TL++P ++ K TP Q+W IKS+ FD V+FFK GKFYEL+ DA++ +
Sbjct: 199 TTLHIPKKYYDKFTPFEKQFWDIKSKYFDTVIFFKKGKFYELYEDDAIVAS 249
>gi|74149495|dbj|BAE36392.1| unnamed protein product [Mus musculus]
Length = 259
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 85/157 (54%), Gaps = 20/157 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEP-NVAFEYMSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + P V +M ++ E
Sbjct: 101 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKCYPEQVGNYHMGFLVNEDE 160
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K++ G D++ FLY++ GI +S+G NVA+LA +P +V++ + ++E +
Sbjct: 161 SKQDSGDMEQMPDSVTFLYQITRGIAARSYGLNVAKLADVPREVLQKAAHKSKELEGLVS 220
Query: 499 LRQLFIHKFASLVKS---------GEKVDVEELQKAL 526
LR+ + F L + +K+++EE+Q +L
Sbjct: 221 LRRKRLECFTDLWTTHSVKDLHTWADKLEMEEIQTSL 257
>gi|195579202|ref|XP_002079451.1| GD23963 [Drosophila simulans]
gi|194191460|gb|EDX05036.1| GD23963 [Drosophila simulans]
Length = 879
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 373 RVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREE 431
R AT K V + RGT T +GC IA E + C T+FATH+H + +
Sbjct: 697 RTATDKSLV--IIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAETL 754
Query: 432 PNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAF 491
P V +M+ + D D LY++ PG+ KSFG VA LA PE VV+ V
Sbjct: 755 PTVKNCHMAAVADA-----DDFTLLYQVRPGVMEKSFGIQVARLANFPEHVVQNAQEVYN 809
Query: 492 QMEARHNLRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQTKKDLEDL 543
+ E H +Q K +K +E++Q A++ + + + ++EDL
Sbjct: 810 EFEDEHVDKQ----------KKEDKALLEKIQVAIQQLSTAGNNVDINVEDL 851
>gi|449705043|gb|EMD45176.1| mutS family protein [Entamoeba histolytica KU27]
Length = 934
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
Y FL +I D +++S Y+P TL++P L K TP Q+W IK N+D V+FF
Sbjct: 35 YSFL--INIKDKNQKSIGEQGYDPSTLFIPASCLMKMTPFEKQYWNIKKDNYDVVIFFAK 92
Query: 230 GKFYELFHMDAVIGADELA 248
GKFYEL+ DA IG EL
Sbjct: 93 GKFYELYENDADIGNKELG 111
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T+DG IA +E + +I L + +THYH + E +V +M I++ +
Sbjct: 807 RGTSTHDGLAIAHAVVEYTVSKIKPLMIVSTHYHQLCEEFEERGDVKLSHMGCTIQNNQ- 865
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
I+FLY L+ G CPKS+G VAE+AG+P +V +A
Sbjct: 866 -----IIFLYTLLDGACPKSYGMKVAEMAGLPTKIVHRAENIA 903
>gi|300794684|ref|NP_001178886.1| DNA mismatch repair protein Msh3 [Rattus norvegicus]
Length = 1105
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEP-NVAFEYMSYI--ED- 444
RGT T+DG IA TLE F++ + LT+F THY V + P V +M ++ ED
Sbjct: 937 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKRYPEQVGNYHMGFLVNEDG 996
Query: 445 -KRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K++ G D++ FLY++ GI +S+G NVA+LA +P ++++ + ++E N
Sbjct: 997 SKQDSGDMEQMPDSVTFLYQITRGIAARSYGLNVAKLADVPREILQKAAHKSKELEGLVN 1056
Query: 499 LRQLFIHKFASL 510
LR+ + F L
Sbjct: 1057 LRRKRLEYFIDL 1068
>gi|407038395|gb|EKE39107.1| mutS family protein [Entamoeba nuttalli P19]
Length = 934
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
Y FL +I D +++S Y+P TL++P L K TP Q+W IK N+D V+FF
Sbjct: 35 YSFL--INIKDKNQKSIGEQGYDPSTLFIPASCLMKMTPFEKQYWNIKKDNYDVVIFFAK 92
Query: 230 GKFYELFHMDAVIGADELA 248
GKFYEL+ DA IG EL
Sbjct: 93 GKFYELYENDADIGNKELG 111
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T+DG IA +E + +I L + +THYH + E +V +M I++ +
Sbjct: 807 RGTSTHDGLAIAHAVVEYTVSKIKPLMIVSTHYHQLCEEFEERGDVKLSHMGCTIQNNQ- 865
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
I+FLY L+ G CPKS+G VAE+AG+P +V +A
Sbjct: 866 -----IIFLYTLLDGACPKSYGMKVAEMAGLPTKIVHRAENIA 903
>gi|67472182|ref|XP_651951.1| mutS family protein [Entamoeba histolytica HM-1:IMSS]
gi|56468745|gb|EAL46564.1| mutS family protein [Entamoeba histolytica HM-1:IMSS]
Length = 934
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
Y FL +I D +++S Y+P TL++P L K TP Q+W IK N+D V+FF
Sbjct: 35 YSFL--INIKDKNQKSIGEQGYDPSTLFIPASCLMKMTPFEKQYWNIKKDNYDVVIFFAK 92
Query: 230 GKFYELFHMDAVIGADELA 248
GKFYEL+ DA IG EL
Sbjct: 93 GKFYELYENDADIGNKELG 111
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T+DG IA +E + +I L + +THYH + E +V +M I++ +
Sbjct: 807 RGTSTHDGLAIAHAVVEYTVSKIKPLMIVSTHYHQLCEEFEERGDVKLSHMGCTIQNNQ- 865
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
I+FLY L+ G CPKS+G VAE+AG+P +V +A
Sbjct: 866 -----IIFLYTLLDGACPKSYGMKVAEMAGLPTKIVHRAENIA 903
>gi|409076365|gb|EKM76737.1| hypothetical protein AGABI1DRAFT_78171 [Agaricus bisporus var.
burnettii JB137-S8]
Length = 1262
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 43/105 (40%), Positives = 57/105 (54%), Gaps = 4/105 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGC-LTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L + LT FATHY S+ + PN+ +MS + D D
Sbjct: 1089 RGTSTFDGMAIAGAVLHQLATHTLPLTFFATHYGSLTDDFAQHPNIRNMHMSTLVD---D 1145
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQM 493
+VFLYKL+ G+ SFG +VA LAG+P +VV+ V+ Q
Sbjct: 1146 EKKELVFLYKLIDGVAESSFGTHVANLAGVPFEVVERADIVSKQF 1190
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 34/78 (43%), Positives = 47/78 (60%), Gaps = 2/78 (2%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
Y FL + D D + P P Y+P+TL++P K+ TP Q+W IK ++D VLFF+
Sbjct: 301 YAFLQ--DVKDKDGKRPGEPGYDPRTLHIPSSVWKEFTPFEKQFWEIKQNHYDTVLFFQK 358
Query: 230 GKFYELFHMDAVIGADEL 247
GKF+EL+ DA IG E
Sbjct: 359 GKFFELYEDDARIGHQEF 376
Score = 40.0 bits (92), Expect = 3.7, Method: Compositional matrix adjust.
Identities = 34/129 (26%), Positives = 62/129 (48%), Gaps = 11/129 (8%)
Query: 269 NYESQTPSGCF---PDMSELLKYFENAFDHKEAS--SAGNIIPKAGVDKEYDEVMDEIKS 323
+++S+T G PD+ +K+ E F + S ++ ++P+ G D+EYD ++ EI
Sbjct: 767 DFKSKTILGLLRGAPDLIPHVKHIEEMFQRPDPSGKASDELLPQKGKDEEYDAIVAEING 826
Query: 324 IEKEIQTYLRTQCAHFGCTVIYSEAQKKQKK-YVLEVP-SKYASKAKSNHQRVATKKKNV 381
+E +++ L G + Y + K Y++E+ +K A + H TK KN
Sbjct: 827 VEGKLEEALSELEDQVGFKLTYWHSATGHKDIYLVEIAVAKKAPSTWTKHS--GTKAKN- 883
Query: 382 ENYVTPECR 390
YV P +
Sbjct: 884 -RYVVPSLQ 891
>gi|401827705|ref|XP_003888145.1| MutS-like mismatch repair ATPase [Encephalitozoon hellem ATCC
50504]
gi|392999345|gb|AFM99164.1| MutS-like mismatch repair ATPase [Encephalitozoon hellem ATCC
50504]
Length = 918
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/95 (43%), Positives = 53/95 (55%), Gaps = 8/95 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG IAR LE Q C +F+THYH + + E V+ YM + ++
Sbjct: 820 RGTSTKDGECIARAVLEYLKQKECHVLFSTHYHGI---IEEVEGVSNGYMGSVVKGKD-- 874
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
IVFLYKL+ GI S G VA +AG+PE VV+
Sbjct: 875 ---IVFLYKLMSGISRDSHGLYVARMAGVPEAVVR 906
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 47/76 (61%), Gaps = 2/76 (2%)
Query: 169 HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFK 228
Y F+ ++I D + R Y+P TL++P + + TP Q+W IK +FD ++FFK
Sbjct: 100 RYGFM--ENIRDKNGRKRGDEGYDPSTLFIPHDEYSRFTPFEKQFWDIKKDHFDTIVFFK 157
Query: 229 VGKFYELFHMDAVIGA 244
GKFYEL+ DA+IGA
Sbjct: 158 KGKFYELYENDALIGA 173
>gi|384109603|ref|ZP_10010474.1| DNA mismatch repair protein MutS [Treponema sp. JC4]
gi|383868827|gb|EID84455.1| DNA mismatch repair protein MutS [Treponema sp. JC4]
Length = 880
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/174 (32%), Positives = 84/174 (48%), Gaps = 25/174 (14%)
Query: 330 TYLRTQCAHFG------CTVIYSE-AQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVE 382
+Y+ + AH G C V S+ K + +++E+ +N ATK+ V
Sbjct: 646 SYIPAEKAHLGIVDRIFCRVGASDNLAKGESTFLVEMTET------ANILHAATKRSLV- 698
Query: 383 NYVTPEC-RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS 440
+ E RGT T DG IAR E L I C T FATHYH ++R E N+ F M
Sbjct: 699 --IMDEVGRGTSTEDGLAIARAVSEYLLDTIKCKTFFATHYHELSRM--EHSNLKFLCMD 754
Query: 441 YIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
E + ++VFL K+ G+ S+G +VA LAGIP+ V+ T+ ++
Sbjct: 755 VSEQQ-----GSVVFLRKIKEGVTENSYGIHVAALAGIPKTVIDRAKTILTHIQ 803
>gi|328866749|gb|EGG15132.1| mutS like protein [Dictyostelium fasciculatum]
Length = 1168
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 57/166 (34%), Positives = 79/166 (47%), Gaps = 11/166 (6%)
Query: 373 RVATKKKNVENYVTPEC-RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLRE 430
R ATK+ V + E RGT T DG IA L+ + I +FATHY S+A
Sbjct: 1008 RYATKRSLV---IMDELGRGTSTFDGYSIAYSVLKYIAETIKSTCIFATHYQSLANEPGI 1064
Query: 431 EPNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
+A +MS D D ++FLYKL GICP S+G +V +AGIP V++ A
Sbjct: 1065 RDTIATSHMSCHVD---DTAKKVIFLYKLCDGICPDSYGLHVGAMAGIPLQVIQVAEQKA 1121
Query: 491 FQMEARHNLRQLF---IHKFASLVKSGEKVDVEELQKALESVKSFE 533
Q E + IH+ ++ K E ++L E KSF+
Sbjct: 1122 RQFEKESTISSYVHGTIHRKEAIRKLKEAAANKDLNTITEIWKSFK 1167
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 31/62 (50%), Positives = 41/62 (66%)
Query: 188 HPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL 247
H Y+P+TLY+PP L TP Q+W IK +N+D V+FFK GKFYEL+ DA IG ++
Sbjct: 223 HEGYDPRTLYIPPVKLSTFTPFERQFWEIKMKNYDTVVFFKKGKFYELYENDADIGNEKF 282
Query: 248 AC 249
Sbjct: 283 GL 284
Score = 43.1 bits (100), Expect = 0.45, Method: Compositional matrix adjust.
Identities = 30/111 (27%), Positives = 56/111 (50%), Gaps = 6/111 (5%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
FP++ + +K+ ++F A+ + + PK G K+YD E+ SIEK++ YL Q
Sbjct: 701 FPNLKKKIKFIRDSFSFDSATQS--LTPKPGRFKDYDAGQIEVDSIEKKLDEYLEEQRKF 758
Query: 339 FGCT-VIYSEAQKKQKKYVLEVPSKYASKAKSNHQ-RVATKKKNVENYVTP 387
F + ++Y K + Y LE+P ++ K + + + K + + TP
Sbjct: 759 FKTSGIVYKHMGK--EIYQLEIPVSVLNRVKITQEYSLKSDSKTFKRFHTP 807
>gi|302678711|ref|XP_003029038.1| hypothetical protein SCHCODRAFT_258263 [Schizophyllum commune H4-8]
gi|300102727|gb|EFI94135.1| hypothetical protein SCHCODRAFT_258263 [Schizophyllum commune H4-8]
Length = 1206
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
Y FL I D D + P Y+P+T+Y+P K+ TP Q+W IK ++D VLFF+
Sbjct: 252 YSFLQ--DIRDKDGKRPGEKGYDPRTIYIPKNAWKEFTPFERQFWEIKQNHYDTVLFFQK 309
Query: 230 GKFYELFHMDAVIGADEL 247
GKFYEL+ DA IG E
Sbjct: 310 GKFYELYEDDARIGHQEF 327
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 59/114 (51%), Gaps = 6/114 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGC-LTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L + LT FATHY ++ P++ +MS + D D
Sbjct: 1037 RGTSTYDGMAIAGAVLHELATHTLPLTFFATHYGTLTDDFAYHPSIRNMHMSTLVD---D 1093
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTV--AFQMEARHNLR 500
IVFL+KLV G+ SFG +VA LAG+P +VV V AF + + L+
Sbjct: 1094 EKKEIVFLFKLVEGVATSSFGTHVANLAGVPIEVVNRADVVSKAFAQQFQQRLQ 1147
Score = 42.4 bits (98), Expect = 0.75, Method: Compositional matrix adjust.
Identities = 38/142 (26%), Positives = 62/142 (43%), Gaps = 13/142 (9%)
Query: 259 GESTLLTQLCNYESQTPSGCF-------PDMSELLKYFENAFDHKEASSAGNIIPKAGVD 311
G + L +ES+T SG P++ ++ + FE KEA ++P G D
Sbjct: 708 GMNALADTAAEFESKTISGLLRGAPDVVPNIKQIEEMFERPASEKEAE---ELVPMEGKD 764
Query: 312 KEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKK-YVLEVPS--KYASKAK 368
YDEV+ EIK++EK + L+ G + Y + K Y++E + K +
Sbjct: 765 AVYDEVIAEIKALEKSLNRQLKKYEDVVGGDLSYWHSATGNKDIYLVETKASQKNIPRDW 824
Query: 369 SNHQRVATKKKNVENYVTPECR 390
+ H K + V + PE R
Sbjct: 825 TKHGGTKAKTRYVVPALQPEIR 846
>gi|148668641|gb|EDL00960.1| mCG131439, isoform CRA_b [Mus musculus]
Length = 708
Score = 72.8 bits (177), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 86/157 (54%), Gaps = 20/157 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEP-NVAFEYMSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + P V +M ++ E
Sbjct: 550 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKCYPEQVGNYHMGFLVNEDE 609
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K++ G D++ FLY++ GI +S+G NVA+LA +P +V++ + ++E +
Sbjct: 610 SKQDSGDMEQMPDSVTFLYQITRGIAARSYGLNVAKLADVPREVLQKAAHKSKELEGLVS 669
Query: 499 LRQLFIHKFASL-----VKS----GEKVDVEELQKAL 526
LR+ + F L VK +K+++EE+Q +L
Sbjct: 670 LRRKRLECFTDLWTTHSVKDLHTWADKLEMEEIQTSL 706
>gi|378725732|gb|EHY52191.1| DNA mismatch repair protein msh3 [Exophiala dermatitidis NIH/UT8656]
Length = 1108
Score = 72.4 bits (176), Expect = 5e-10, Method: Compositional matrix adjust.
Identities = 41/116 (35%), Positives = 61/116 (52%), Gaps = 7/116 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFE--YMSYIEDKR 446
RGT T+DG IA L+ ++ CLT+F THY +AR PN + +M + R
Sbjct: 957 RGTSTHDGVAIAASVLDYLVRDRKCLTLFITHYQMLARMANGFPNGELKNVHMRF----R 1012
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
D + + FLY++ G+ +S+G NVA LA I E V+ + ++E RQL
Sbjct: 1013 EDDDENVAFLYEVAEGVAHRSYGLNVARLANISESVIDVARQKSAELETETKARQL 1068
>gi|168702353|ref|ZP_02734630.1| DNA mismatch repair protein [Gemmata obscuriglobus UQM 2246]
Length = 861
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 57/183 (31%), Positives = 82/183 (44%), Gaps = 18/183 (9%)
Query: 329 QTYLRTQCAHFGCTVIYSEAQ--KKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVT 386
Q L T AH G V A+ + + S S+ +S T+ N+ N T
Sbjct: 620 QAALITLMAHVGSFVPAKSAKVGLTDRIFTRVGASDELSRGQSTFMVEMTEAANILNNAT 679
Query: 387 PEC--------RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYHSVARRLREEPNVAF 436
RGT T DG +A E +L + C T+FATHYH +A+ P +
Sbjct: 680 ARSLVILDEIGRGTSTYDGVSLAWAMTE-YLHDTLACRTLFATHYHELAQLAASLPRLR- 737
Query: 437 EYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
Y + + D IVFL+K+ PG +S+G +VA LAG+P V+ T V +E
Sbjct: 738 NYNVLVREL----ADEIVFLHKIAPGNAERSYGIHVARLAGVPGSVLARATAVLGTLEKG 793
Query: 497 HNL 499
H+L
Sbjct: 794 HDL 796
>gi|296034483|gb|ADG85113.1| mismatch repair protein [Solanum lycopersicum]
Length = 782
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSY-IEDKRN 447
RGT T DG IA ++ + C +FATHYH + + P+VA ++M+ + K
Sbjct: 616 RGTSTFDGYAIAYAVFRHLVETVNCRLLFATHYHPLTKEFASHPHVALQHMACSFKLKSQ 675
Query: 448 DGIDT---IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
T +VFLY+L G CP+S+G VA +AGIP+ VV+ + A M+
Sbjct: 676 SSSPTEQELVFLYRLTSGACPESYGMQVALMAGIPKTVVESALSAAQVMK 725
>gi|302871703|ref|YP_003840339.1| DNA mismatch repair protein MutS [Caldicellulosiruptor obsidiansis
OB47]
gi|302574562|gb|ADL42353.1| DNA mismatch repair protein MutS [Caldicellulosiruptor obsidiansis
OB47]
Length = 863
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 48/120 (40%), Positives = 66/120 (55%), Gaps = 12/120 (10%)
Query: 390 RGTGTNDGCVIARVTLEKFL---QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG IA LE +IG T+FATHYH + + P V +Y D +
Sbjct: 690 RGTSTYDGLSIAWAVLEYVADKSKIGAKTLFATHYHELTELEEKIPGVK----NYRVDVK 745
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA----RHNLRQL 502
+G +VFL K+V G C S+G +VA LAGIPE+V+K + Q+E R ++R+L
Sbjct: 746 EEG-KNVVFLRKIVRGGCDSSYGIHVARLAGIPEEVLKRAEEILKQLEEADINRKSIRKL 804
Score = 53.1 bits (126), Expect = 4e-04, Method: Compositional matrix adjust.
Identities = 20/48 (41%), Positives = 33/48 (68%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+++ TP M Q+ IK + DC+LFF++G FYE+F DA++ + EL +
Sbjct: 1 MQELTPMMQQYMEIKQKVKDCILFFRLGDFYEMFFEDAIVASKELEIA 48
>gi|429849425|gb|ELA24817.1| DNA mismatch repair protein msh6 [Colletotrichum gloeosporioides
Nara gc5]
Length = 1294
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 45/67 (67%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+I D ++ SP P+Y+P ++Y+PP K +P Q+W IK + +D V+FFK GKFYEL+
Sbjct: 380 NIQDINKNSPGDPEYDPSSVYIPPGAWNKFSPFEKQYWEIKQKLWDTVVFFKKGKFYELY 439
Query: 237 HMDAVIG 243
DA IG
Sbjct: 440 ENDATIG 446
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 46/157 (29%), Positives = 71/157 (45%), Gaps = 20/157 (12%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L +GC+ FATHYHS+A P + M D+
Sbjct: 1141 RGTSSYDGVAVAQAVLHHVATHVGCVGFFATHYHSLATEFENHPEIVPRRMQIHVDEEER 1200
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF----- 503
+ FLYKL G+ SFG + A + GI V++ A + E L++
Sbjct: 1201 ---RVTFLYKLEEGVAEGSFGMHCAAMCGISNRVIERAEVAAKEWEHTSRLKESLEKAKS 1257
Query: 504 --------IHKFASLVKSGEKV---DVEELQKALESV 529
+ ASL+ G++V VE L +A+E++
Sbjct: 1258 GCYIPLGVLSDVASLLNGGDEVGKRGVEVLLRAVEAL 1294
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 28/98 (28%), Positives = 59/98 (60%), Gaps = 5/98 (5%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
P+++E L Y++ AFD K+A +IP+ G+++++D D I+ I++E+Q+ L + +
Sbjct: 840 MPNLNEPLSYWKTAFDRKKARDEKLLIPERGIEEDFDNSQDRIEEIKEELQSLLGRKKSE 899
Query: 339 FGC-TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVA 375
C T+ +++ K + Y +E P A K +N ++++
Sbjct: 900 LKCKTIKFTDIGK--EIYQIEAPK--AVKVPNNWRQMS 933
>gi|19114864|ref|NP_593952.1| DNA mismatch repair protein [Schizosaccharomyces pombe 972h-]
gi|11230451|emb|CAB52164.2| MutS protein homolog 3 [Schizosaccharomyces pombe]
Length = 1004
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 13/144 (9%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVA---RRLREEPNVAFEYMSYI--- 442
RGT T DG I+ L Q I +F TH+ S+ RR E + +M Y+
Sbjct: 853 RGTSTIDGEAISYAVLHYLNQYIKSYLLFVTHFPSLGILERRF--EGQLRCFHMGYLKSK 910
Query: 443 EDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARH-NLRQ 501
ED +I FLYKLVPG+ KS+G NVA +AGIP ++ T ++ E +H N R+
Sbjct: 911 EDFETSVSQSISFLYKLVPGVASKSYGLNVARMAGIPFSILSRATEISENYEKKHRNARK 970
Query: 502 -LFIHKFASL--VKSGEKVDVEEL 522
+FI K A L + + E++D + L
Sbjct: 971 NVFIRKVAKLLMILNAEEIDFKRL 994
>gi|67522503|ref|XP_659312.1| hypothetical protein AN1708.2 [Aspergillus nidulans FGSC A4]
gi|40745672|gb|EAA64828.1| hypothetical protein AN1708.2 [Aspergillus nidulans FGSC A4]
gi|259487049|tpe|CBF85409.1| TPA: protein required for mismatch repair in mitosis and meiosis
(Eurofung) [Aspergillus nidulans FGSC A4]
Length = 1186
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 47/147 (31%), Positives = 79/147 (53%), Gaps = 13/147 (8%)
Query: 246 ELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNII 305
E S +K+SG +GE ++ QL PD++ELL+Y++ AFDH +A +G ++
Sbjct: 700 EYTMSLLKDSG-SGEG-VIGQLIK--------SMPDLTELLEYWKTAFDHNQAKESGILV 749
Query: 306 PKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYAS 365
PK GV++++D + I+ + +++ L+ G T I K+ Y +EVP K +
Sbjct: 750 PKPGVEEDFDSSQETIRQLHQDLDDLLKRTRRELGSTAICYRDNGKE-IYQMEVPIKVKN 808
Query: 366 KAKSNHQRVATKKKNVENYVTPECRGT 392
++ Q ATK+ V+ Y PE R T
Sbjct: 809 IPRNWDQMSATKQ--VKRYYFPELRTT 833
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/106 (35%), Positives = 51/106 (48%), Gaps = 4/106 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IG L FATHYHS+A P + + M D+
Sbjct: 1025 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLAAEFENHPEIKPKRMKIHVDENER 1084
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ FLYKL G+ SFG + A + GIP V++ A Q E
Sbjct: 1085 ---RVTFLYKLEDGVAEGSFGMHCAAMCGIPNKVIERAEVAAKQWE 1127
Score = 60.5 bits (145), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 57/223 (25%), Positives = 91/223 (40%), Gaps = 40/223 (17%)
Query: 44 RPRRKSAKRVK-----------------SAIQSDSEPDDMLQDNGSEDEYVP------PK 80
RP RK+++ K +A S+ E DD + + S+DE P P
Sbjct: 123 RPTRKNSRASKRRKLSPESDDEFEEEEGNAGYSEDEMDDFIVPDDSDDESRPSKKRKKPA 182
Query: 81 AEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPS 140
+++ +S ++E + P +S + L + + S
Sbjct: 183 VQLKRKSSSMPPPPAVDEDSDLILPEASSGSALKW-TYDPNNLEPREARAITTTTSKTSS 241
Query: 141 TPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPP 200
+ + P ++ + P W N I D D P+Y+P+TLY+PP
Sbjct: 242 SSAKPKAHTTEPEQRYP-------WLAN---------IRDIDGHPIGDPEYDPRTLYIPP 285
Query: 201 EFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
K +P Q+W IK + +D V+FFK GKFYEL+ DA IG
Sbjct: 286 LAWSKFSPFEKQYWEIKQKFWDTVVFFKKGKFYELYENDATIG 328
>gi|135075|sp|P26359.1|MSH3_SCHPO RecName: Full=DNA mismatch repair protein msh3; AltName:
Full=Mating-type switching protein swi4; AltName:
Full=MutS protein homolog 3
gi|5113|emb|CAA43603.1| Swi4 [Schizosaccharomyces pombe]
Length = 993
Score = 72.4 bits (176), Expect = 6e-10, Method: Compositional matrix adjust.
Identities = 53/144 (36%), Positives = 76/144 (52%), Gaps = 13/144 (9%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVA---RRLREEPNVAFEYMSYI--- 442
RGT T DG I+ L Q I +F TH+ S+ RR E + +M Y+
Sbjct: 842 RGTSTIDGEAISYAVLHYLNQYIKSYLLFVTHFPSLGILERRF--EGQLRCFHMGYLKSK 899
Query: 443 EDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARH-NLRQ 501
ED +I FLYKLVPG+ KS+G NVA +AGIP ++ T ++ E +H N R+
Sbjct: 900 EDFETSVSQSISFLYKLVPGVASKSYGLNVARMAGIPFSILSRATEISENYEKKHRNARK 959
Query: 502 -LFIHKFASL--VKSGEKVDVEEL 522
+FI K A L + + E++D + L
Sbjct: 960 NVFIRKVAKLLMILNAEEIDFKRL 983
>gi|167384705|ref|XP_001737066.1| hypothetical protein [Entamoeba dispar SAW760]
gi|165900342|gb|EDR26686.1| hypothetical protein, conserved [Entamoeba dispar SAW760]
Length = 934
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 36/79 (45%), Positives = 47/79 (59%), Gaps = 2/79 (2%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
Y FL +I D +++S Y+P TL++P L K TP Q+W IK N+D V+FF
Sbjct: 35 YSFL--INIKDKNQKSIGEQGYDPSTLFIPASCLMKMTPFEKQYWNIKKDNYDVVVFFAK 92
Query: 230 GKFYELFHMDAVIGADELA 248
GKFYEL+ DA IG EL
Sbjct: 93 GKFYELYENDADIGNKELG 111
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 38/103 (36%), Positives = 57/103 (55%), Gaps = 8/103 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T+DG IA +E + +I L + +THYH + E +V +M I++ +
Sbjct: 807 RGTSTHDGLAIAHAVVEYTVSKIKPLMIVSTHYHQLCEEFEERGDVKLSHMGCTIQNNQ- 865
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
I+FLY L+ G CPKS+G VAE+AG+P +V +A
Sbjct: 866 -----IIFLYTLLDGACPKSYGMKVAEMAGLPTKIVHRAENIA 903
>gi|389603249|ref|XP_001568836.2| putative mismatch repair protein MSH8 [Leishmania braziliensis
MHOM/BR/75/M2904]
gi|322505782|emb|CAM43968.2| putative mismatch repair protein MSH8 [Leishmania braziliensis
MHOM/BR/75/M2904]
Length = 1014
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 63/129 (48%), Gaps = 32/129 (24%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI---GCLTVFATHYHSVA----RRLREEPN------VAF 436
RGT T+DG IA TL LT+F+THYH++A RR + P V
Sbjct: 860 RGTSTHDGMAIAYATLHALTATNPAAPLTIFSTHYHALAMEQARRATQTPTDTRARAVQL 919
Query: 437 EYMSYI----------EDKRNDG---------IDTIVFLYKLVPGICPKSFGFNVAELAG 477
YM ++ ++K ND + ++ FLY+LV GIC +S+G VA +AG
Sbjct: 920 GYMDFVLKSETAAAFSDEKANDASCSCAQGSCVSSVAFLYRLVRGICSRSYGVEVAVMAG 979
Query: 478 IPEDVVKFG 486
IP +V+
Sbjct: 980 IPHTLVQLA 988
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P P T+ +P ++L Q+W IKS++++ V+FFK GKFYEL+ DAVI E
Sbjct: 25 PTAPPSTITIPQKYLDAMANMERQYWDIKSKHYNVVVFFKKGKFYELYDYDAVIANREFG 84
Query: 249 CSYMKESGCTGESTL 263
+ ++ G+ L
Sbjct: 85 LKMVFDTSNRGKMRL 99
>gi|410083765|ref|XP_003959460.1| hypothetical protein KAFR_0J02610 [Kazachstania africana CBS 2517]
gi|372466051|emb|CCF60325.1| hypothetical protein KAFR_0J02610 [Kazachstania africana CBS 2517]
Length = 1018
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 40/98 (40%), Positives = 62/98 (63%), Gaps = 6/98 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI-GC-LTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGTGT DG I+ L+ F+++ C L +F TH+ ++ L + F YM Y+E+K N
Sbjct: 873 RGTGTLDGRAISYALLKYFVELENCPLILFTTHFSKLSESLASKHIKNF-YMDYVEEK-N 930
Query: 448 DGID--TIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
DG + +++FLY L+PG SFG NVA+LA + +D++
Sbjct: 931 DGENWSSVIFLYNLIPGSSNDSFGLNVAKLANLDKDII 968
>gi|195474019|ref|XP_002089289.1| GE19033 [Drosophila yakuba]
gi|194175390|gb|EDW89001.1| GE19033 [Drosophila yakuba]
Length = 917
Score = 72.4 bits (176), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 373 RVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREE 431
R AT K V + RGT T +GC IA E + C T+FATH+H + +
Sbjct: 735 RTATDKSLV--IIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAETL 792
Query: 432 PNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAF 491
P V +M+ + D D LY++ PG+ KSFG VA LA P+ VV+ V
Sbjct: 793 PTVKNCHMAAVADA-----DNFTLLYQVRPGVMEKSFGIQVARLANFPDHVVQNAQEVYN 847
Query: 492 QMEARHNLRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQTKKDLEDL 543
+ E H +Q K +K +E++Q A++ + + + ++EDL
Sbjct: 848 EFEDEHVDKQ----------KKEDKALLEKIQVAIQQLSTAGNNVDINVEDL 889
>gi|194857041|ref|XP_001968883.1| GG25117 [Drosophila erecta]
gi|190660750|gb|EDV57942.1| GG25117 [Drosophila erecta]
Length = 917
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 54/172 (31%), Positives = 81/172 (47%), Gaps = 18/172 (10%)
Query: 373 RVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREE 431
R AT K V + RGT T +GC IA E + C T+FATH+H + +
Sbjct: 735 RTATDKSLV--IIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLADTL 792
Query: 432 PNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAF 491
P V +M+ + D D LY++ PG+ KSFG VA LA PE VV+ V
Sbjct: 793 PTVKNCHMAAVADA-----DHFTLLYQVRPGVMEKSFGIQVARLANFPEHVVQNAQEVYN 847
Query: 492 QMEARHNLRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQTKKDLEDL 543
+ E H +Q K +K +E++Q A++ + + + ++EDL
Sbjct: 848 EFEDEHVDKQ----------KKEDKALLEKIQVAIQQLSTAGNNVDINVEDL 889
>gi|26252149|gb|AAH40784.1| Msh3 protein [Mus musculus]
Length = 385
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 50/157 (31%), Positives = 85/157 (54%), Gaps = 20/157 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEP-NVAFEYMSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + P V +M ++ E
Sbjct: 227 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKCYPEQVGNYHMGFLVNEDE 286
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K++ G D++ FLY++ GI +S+G NVA+LA +P +V++ + ++E +
Sbjct: 287 SKQDSGDMEQMPDSVTFLYQITRGIAARSYGLNVAKLADVPREVLQKAAHKSKELEGLVS 346
Query: 499 LRQLFIHKFASLVKS---------GEKVDVEELQKAL 526
LR+ + F L + +K+++EE+Q +L
Sbjct: 347 LRRKRLECFTDLWTTHSVKDLHTWADKLEMEEIQTSL 383
>gi|311992451|gb|ADQ26783.1| putative mismatch repair protein [Tetrahymena thermophila]
Length = 1389
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 30/78 (38%), Positives = 49/78 (62%)
Query: 172 FLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGK 231
FL ++ DA+ R P+Y+P TL++P + LKK+TP Q+W IK ++FD V+FF+ G+
Sbjct: 302 FLTKKYLKDAEGRPVDDPEYDPSTLFIPIQELKKETPLFQQYWKIKVKHFDKVVFFRFGR 361
Query: 232 FYELFHMDAVIGADELAC 249
+ F+ DA++ C
Sbjct: 362 NFVCFYTDAILMKKLFDC 379
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 9/139 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L ++ + CLT+F+THYH + + NV M + +
Sbjct: 1249 RGTSTFDGVSIAYGVLRYLVENVKCLTLFSTHYHMLVDEFKLYKNVQSYVMDFDYCSQQK 1308
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARH----NLRQLFI 504
ID F YK + G KSFG NVA++AG+P+ V+ + M + N+R++
Sbjct: 1309 KID---FKYKYIKGSSEKSFGVNVAKMAGLPDSVIDKAHKMEHYMNSEDQNIGNVRRI-T 1364
Query: 505 HKFASLVKSGEKVDVEELQ 523
KF S++++ + D LQ
Sbjct: 1365 QKFNSIIEAQHQSDDTLLQ 1383
>gi|410584485|ref|ZP_11321588.1| DNA mismatch repair protein MutS [Thermaerobacter subterraneus DSM
13965]
gi|410504420|gb|EKP93931.1| DNA mismatch repair protein MutS [Thermaerobacter subterraneus DSM
13965]
Length = 1038
Score = 72.0 bits (175), Expect = 7e-10, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 61/114 (53%), Gaps = 6/114 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IAR +E +IG T+ +THYH + P + + +E+
Sbjct: 734 RGTSTFDGIAIARAVIEYIHDRIGARTLVSTHYHELTGLAATRPGIRNYHARVVEEG--- 790
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
D I FL+++ PG +S+G NVA LAG+P ++V+ + +++ R RQ+
Sbjct: 791 --DGIRFLWRIAPGGADRSYGINVARLAGLPVEIVERAKAILAELDRRAGPRQI 842
>gi|403217557|emb|CCK72051.1| hypothetical protein KNAG_0I02660 [Kazachstania naganishii CBS 8797]
Length = 1051
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 67/110 (60%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGC-LTVFATHYHSVARRLREEPNVAFE--YMSYIEDK 445
RGTGT DG I L+ +L+ + C L +F TH+ + ++LR+ A + YM Y+E++
Sbjct: 899 RGTGTIDGRAICYAILKYYLELVDCPLILFTTHFPDIGKQLRDTYQKAIKNFYMDYVEEQ 958
Query: 446 R-NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ + +++FLY+L G+ S+G NVA+LAGI +++ V+ +M+
Sbjct: 959 KPGESWQSVIFLYQLKEGLSEDSYGLNVAKLAGIDSEIINSAYQVSRKMK 1008
>gi|393212242|gb|EJC97743.1| DNA mismatch repair protein Msh6 [Fomitiporia mediterranea MF3/22]
Length = 1254
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 44/102 (43%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGC-LTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L + L FATHY S+ PN+ +MS I D D
Sbjct: 1090 RGTSTYDGMAIAGAVLHQLATHTLPLCFFATHYGSLTDDFAYHPNIRNMHMSTIID---D 1146
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
+VFLYKLV G+ SFG +VA LAG+P DVVK ++
Sbjct: 1147 EKCELVFLYKLVEGVAASSFGTHVANLAGVPMDVVKRAEVIS 1188
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/78 (44%), Positives = 46/78 (58%), Gaps = 2/78 (2%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
+ FL H D +R P P Y+P+TLY+P K TP Q+W IK+ ++D VLFF+
Sbjct: 315 FDFLRDVHDKDGNR--PGEPGYDPRTLYIPKSAWKTFTPFERQFWEIKANHYDTVLFFQK 372
Query: 230 GKFYELFHMDAVIGADEL 247
GKF EL+ DA IG E
Sbjct: 373 GKFLELYEDDARIGHREF 390
>gi|412985886|emb|CCO17086.1| DNA mismatch repair protein Msh3 [Bathycoccus prasinos]
Length = 1118
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 49/150 (32%), Positives = 79/150 (52%), Gaps = 15/150 (10%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREE--PNVAFEYMSYIEDKR 446
RGT T DG +A TL ++ + C TVF TH+ ++A++ +E V + S++ K
Sbjct: 964 RGTSTTDGIALATATLRMLVEKVQCATVFVTHFSNLAKQFKESNADEVFCCFPSHM--KT 1021
Query: 447 NDGIDT--IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF- 503
ND D+ I FLY L G+ +SFG NVA +AGIPE V++ + E + + +
Sbjct: 1022 NDEKDSKRIAFLYTLEEGVAHRSFGLNVASMAGIPEKVLEVAEVKSLAFEEKSSRKSAGS 1081
Query: 504 -------IHKFASLVKSGEKVDVEELQKAL 526
+ + A L++S ++E Q+AL
Sbjct: 1082 DEVVGDKMIRDALLLESSNIAQIKETQRAL 1111
>gi|302309404|ref|NP_986782.2| AGR116Wp [Ashbya gossypii ATCC 10895]
gi|299788343|gb|AAS54606.2| AGR116Wp [Ashbya gossypii ATCC 10895]
Length = 1167
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 32/72 (44%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Query: 169 HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFK 228
YQ+L + DA R P P+Y+P+TL++P + + TP Q+W IKS+ +DC++FFK
Sbjct: 205 RYQWLVDER--DAAGRPPSDPEYDPRTLHIPAQAWARFTPFEKQYWQIKSKMWDCIVFFK 262
Query: 229 VGKFYELFHMDA 240
GKF+EL+ DA
Sbjct: 263 KGKFFELYEKDA 274
Score = 57.8 bits (138), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 34/96 (35%), Positives = 48/96 (50%), Gaps = 4/96 (4%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L + L FATHY ++ + P V M+ + D +
Sbjct: 993 RGGSSSDGFAIAEGVLHHISTHVQSLGFFATHYGTLGQSFTHHPMVKPLQMAILVD---E 1049
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
G + FLYKL+ G SFG +VA + GIP VV+
Sbjct: 1050 GSKKVTFLYKLIEGQSEGSFGMHVAAMCGIPRSVVE 1085
Score = 45.4 bits (106), Expect = 0.074, Method: Compositional matrix adjust.
Identities = 35/134 (26%), Positives = 67/134 (50%), Gaps = 9/134 (6%)
Query: 263 LLTQLCNYE-SQTPSGCFPDMSELLKY----FENAFDHKEASSAGNIIPKAGVDKEYDEV 317
L++ L YE S + S D+ LK + +D A S G ++P AGV+ ++D
Sbjct: 657 LISSLNEYELSGSLSRFLHDIPSTLKSDVESWTTLYDRNMAVSEGKVVPNAGVEPDFDVS 716
Query: 318 MDEIKSIEKEIQTYLRTQCAHFGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVAT 376
+ +++++E+E+ L F C+ I Y ++ K+ Y +E+P A SN ++
Sbjct: 717 LSKMRALEEELDAVLSEYKRSFKCSKIQYKDSGKEL--YTIELPISIAKSVPSNWTQLGA 774
Query: 377 KKKNVENYVTPECR 390
K+ + Y +P+ +
Sbjct: 775 -NKSTKRYYSPKVQ 787
>gi|190359894|sp|Q0UXL8.3|MSH3_PHANO RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
Length = 1119
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 78/145 (53%), Gaps = 9/145 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFE--YMSYIEDKR 446
RGT T DG IA L+ ++ +G LT+F THY +AR L++ N + +MS+ E
Sbjct: 979 RGTSTFDGVAIAEAVLDYVIRDVGALTLFITHYQHLAR-LQDRFNGELKNVHMSFEE--- 1034
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL--FI 504
DG +VFLY++ G +S+G NVA LA +PE V++ + ++E + ++
Sbjct: 1035 RDGGKEVVFLYEVAEGTSHRSYGLNVARLAKVPEKVIETAEVKSSELEESMGISRVANMA 1094
Query: 505 HKFASLVKSGEKVDVEELQKALESV 529
L++ G + +E L + +E +
Sbjct: 1095 RMVKGLLEDGGEEGLERLIEGIEQL 1119
>gi|146418998|ref|XP_001485464.1| hypothetical protein PGUG_03193 [Meyerozyma guilliermondii ATCC
6260]
Length = 1198
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 71/248 (28%), Positives = 116/248 (46%), Gaps = 23/248 (9%)
Query: 10 EKKGDSESSTPASSKGKKTSKSPAKSEDDSPVTKRPRRKSAKRVKSA------IQSDSEP 63
E K E S+P S +G+ + DD VT +RK +R+ + +++
Sbjct: 112 EPKRPQEGSSPLSKRGRARKSTSYAESDDEDVT--VKRKKTRRIDDSDDDEDEFKAEDLS 169
Query: 64 DDMLQDNGSEDEYVPPKAEVESESEHSSGEEELEESVEDP---TPSSSEAEVTPMKNGNK 120
DD + D+ P AE + E EEE+ + + P +P +S + V+ + N
Sbjct: 170 DDDDDMSDFIDDEAEPSAEEAEDIEILDAEEEVVKPRKKPRKSSPKNSPSPVSTTETTNV 229
Query: 121 RGLSSKSGQP-TKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHIL 179
G K+G + +PK A V+ +++ P ++ YQ+L ++
Sbjct: 230 LGEKFKAGSSYSAQPKQVATKL-------VTKAAKSPPKNFAKEN--EERYQWLV--NVR 278
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMD 239
DA++R+ P+Y+P+TLY+P K T Q+W IK +D V+FFK GKFYEL+ D
Sbjct: 279 DAEKRTMDDPNYDPRTLYIPQSAWSKFTAFEKQYWEIKGVMWDTVVFFKKGKFYELYEND 338
Query: 240 AVIGADEL 247
A I E
Sbjct: 339 ATIANSEF 346
Score = 60.1 bits (144), Expect = 3e-06, Method: Compositional matrix adjust.
Identities = 36/106 (33%), Positives = 49/106 (46%), Gaps = 4/106 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L + L FATHY S+ P + M+ + D+ +
Sbjct: 1036 RGGSSSDGFAIAEAVLHHLATHVQPLGFFATHYGSLVLSFEGHPQIRPLRMAIVIDQNSR 1095
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
I FLYKL G P SFG NVA + GI ++V A + E
Sbjct: 1096 NI---TFLYKLEDGTAPGSFGMNVAAMCGISSEIVDQAEVAAIKYE 1138
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 30/103 (29%), Positives = 55/103 (53%), Gaps = 6/103 (5%)
Query: 289 FENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCT-VIYSE 347
+E+AFD EA + ++P GVD+ +D D +K +E + +LR + + Y +
Sbjct: 746 WEDAFDRSEALN-DVVVPATGVDESFDASSDRMKKLEDILNEHLRKYKKEYRSNEICYKD 804
Query: 348 AQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
+ K+ Y++EVP+K + HQ +T K V+ + +PE +
Sbjct: 805 SGKEI--YLIEVPNKVKNIPSDWHQMGSTSK--VKRFWSPEVK 843
>gi|440639711|gb|ELR09630.1| hypothetical protein GMDG_04121 [Geomyces destructans 20631-21]
Length = 1129
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 83/151 (54%), Gaps = 17/151 (11%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLR-----EEPNVAFEYMSYIE 443
RGT T+DG IA+ L+ ++ + CLT+F THY ++A R E NV +M + E
Sbjct: 985 RGTSTHDGVAIAQAVLDYVVRDLKCLTLFITHYQTLAGVARAFGSGELRNV---HMKFTE 1041
Query: 444 DKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF 503
R G + I FL+++ G+ +S+G NVA LA IP+ V++ + +ME + R+
Sbjct: 1042 HGRV-GDEDITFLFQIGEGVAHRSYGLNVARLARIPKGVLEVAKEKSSRMEEEN--RRTL 1098
Query: 504 IHKFASLVKS--GE---KVDVEELQKALESV 529
+ A L++ GE V+++ L K +E +
Sbjct: 1099 VGGLAGLLRRVVGEGIGDVELDALVKGIEQL 1129
>gi|169601270|ref|XP_001794057.1| hypothetical protein SNOG_03496 [Phaeosphaeria nodorum SN15]
gi|160705896|gb|EAT88701.2| hypothetical protein SNOG_03496 [Phaeosphaeria nodorum SN15]
Length = 1104
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 78/145 (53%), Gaps = 9/145 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFE--YMSYIEDKR 446
RGT T DG IA L+ ++ +G LT+F THY +AR L++ N + +MS+ E
Sbjct: 964 RGTSTFDGVAIAEAVLDYVIRDVGALTLFITHYQHLAR-LQDRFNGELKNVHMSFEE--- 1019
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL--FI 504
DG +VFLY++ G +S+G NVA LA +PE V++ + ++E + ++
Sbjct: 1020 RDGGKEVVFLYEVAEGTSHRSYGLNVARLAKVPEKVIETAEVKSSELEESMGISRVANMA 1079
Query: 505 HKFASLVKSGEKVDVEELQKALESV 529
L++ G + +E L + +E +
Sbjct: 1080 RMVKGLLEDGGEEGLERLIEGIEQL 1104
>gi|353237288|emb|CCA69264.1| related to DNA mismatch repair protein [Piriformospora indica DSM
11827]
Length = 1071
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 55/97 (56%), Gaps = 3/97 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREE-PN-VAFEYMSYIEDKR 446
RGT T DG IA L+ + I C T+F THY + L ++ P VA +M Y+E++
Sbjct: 920 RGTATWDGVAIATAVLDHMVSVIRCKTLFITHYPQIGVELSQKYPGLVANAHMGYLEEEL 979
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
DG I FLY+L G+ KSFG LAG+PE V+
Sbjct: 980 ADGRREIHFLYRLQDGVADKSFGVECGRLAGLPEVVL 1016
>gi|410948910|ref|XP_003981170.1| PREDICTED: DNA mismatch repair protein Msh3 [Felis catus]
Length = 1126
Score = 72.0 bits (175), Expect = 8e-10, Method: Compositional matrix adjust.
Identities = 43/131 (32%), Positives = 73/131 (55%), Gaps = 10/131 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARR----LREEPNVAFEYMSYIED 444
RGT T+DG IA TLE F++ + LT+F THY V L++ N ++ ++
Sbjct: 970 RGTSTHDGIAIAYATLEHFIKDVKSLTLFVTHYPPVCELEKSYLQQVGNYHMGFLVNEDE 1029
Query: 445 KRND-----GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
+ D D + FLY++ GI +S+G NVA+LA +PE+++K + + ++E N+
Sbjct: 1030 SKEDPGEEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPEEILKKAASKSKELEGLVNM 1089
Query: 500 RQLFIHKFASL 510
++ + FA L
Sbjct: 1090 KRKRLKCFAKL 1100
>gi|402086031|gb|EJT80929.1| DNA mismatch repair protein msh6 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1236
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 130 PTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHP 189
P +P AP P+ P ++ P T ++ + Y +L I D D P+
Sbjct: 264 PAPQPGDKAPRKPA-PKAAAFKHKDSKPHTKKSE--QDDRYVWLA--SIRDMDGNKPEDA 318
Query: 190 DYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
++NP T+Y+PP K +P Q+W IK + +D V+FFK GKFYEL+ DA IG
Sbjct: 319 EFNPATIYIPPSAWKNFSPFEKQYWEIKQKLWDTVVFFKKGKFYELYENDATIG 372
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 80/191 (41%), Gaps = 25/191 (13%)
Query: 330 TYLRTQC-----AHFGCTVIYSEAQKKQKKYVLEVPSKYASK-----AKSNHQRVATKKK 379
T LR C A GC Y A+ + V + S+ + A+S ++ K
Sbjct: 1004 TVLRMSCIAVIMAQIGC---YVPARSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETK 1060
Query: 380 NVENYVTPEC--------RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLRE 430
+ + TP RGT + DG +A+ L IGC+ FATHYHS+A
Sbjct: 1061 KILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVASHIGCVGFFATHYHSLATEFEG 1120
Query: 431 EPNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
P + M D +G + FLY+L G+ SFG + A + GI V++ A
Sbjct: 1121 HPEIRARRMQIQVD---EGRRRVTFLYRLEDGVAEGSFGMHCAAMCGISGRVIERAEVAA 1177
Query: 491 FQMEARHNLRQ 501
+ E L++
Sbjct: 1178 REWEHTSRLKE 1188
Score = 48.5 bits (114), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 277 GCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQC 336
G PD+ E L +++ AFD K+ ++P+ G+++++DE I I++E+ L Q
Sbjct: 776 GSMPDLKEPLGFWKGAFDRKKVRDQKLLVPEKGIEEDFDESAANIARIKRELHALLDRQK 835
Query: 337 AHFGC-TVIYSEAQKKQKKYVLEVP 360
A C T+ +++ K + Y +E P
Sbjct: 836 AALKCKTLKFTDVGK--EIYQVEAP 858
>gi|402086030|gb|EJT80928.1| DNA mismatch repair protein msh6, variant [Gaeumannomyces graminis
var. tritici R3-111a-1]
Length = 1235
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 60/114 (52%), Gaps = 5/114 (4%)
Query: 130 PTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHP 189
P +P AP P+ P ++ P T ++ + Y +L I D D P+
Sbjct: 263 PAPQPGDKAPRKPA-PKAAAFKHKDSKPHTKKSE--QDDRYVWLA--SIRDMDGNKPEDA 317
Query: 190 DYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
++NP T+Y+PP K +P Q+W IK + +D V+FFK GKFYEL+ DA IG
Sbjct: 318 EFNPATIYIPPSAWKNFSPFEKQYWEIKQKLWDTVVFFKKGKFYELYENDATIG 371
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/191 (27%), Positives = 80/191 (41%), Gaps = 25/191 (13%)
Query: 330 TYLRTQC-----AHFGCTVIYSEAQKKQKKYVLEVPSKYASK-----AKSNHQRVATKKK 379
T LR C A GC Y A+ + V + S+ + A+S ++ K
Sbjct: 1003 TVLRMSCIAVIMAQIGC---YVPARSARLTPVDRIMSRLGANDNIFAAQSTFFVELSETK 1059
Query: 380 NVENYVTPEC--------RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLRE 430
+ + TP RGT + DG +A+ L IGC+ FATHYHS+A
Sbjct: 1060 KILSEATPRSLVILDELGRGTSSYDGVAVAQAVLHHVASHIGCVGFFATHYHSLATEFEG 1119
Query: 431 EPNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
P + M D +G + FLY+L G+ SFG + A + GI V++ A
Sbjct: 1120 HPEIRARRMQIQVD---EGRRRVTFLYRLEDGVAEGSFGMHCAAMCGISGRVIERAEVAA 1176
Query: 491 FQMEARHNLRQ 501
+ E L++
Sbjct: 1177 REWEHTSRLKE 1187
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 25/85 (29%), Positives = 47/85 (55%), Gaps = 3/85 (3%)
Query: 277 GCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQC 336
G PD+ E L +++ AFD K+ ++P+ G+++++DE I I++E+ L Q
Sbjct: 775 GSMPDLKEPLGFWKGAFDRKKVRDQKLLVPEKGIEEDFDESAANIARIKRELHALLDRQK 834
Query: 337 AHFGC-TVIYSEAQKKQKKYVLEVP 360
A C T+ +++ K + Y +E P
Sbjct: 835 AALKCKTLKFTDVGK--EIYQVEAP 857
>gi|345452695|gb|AEN94559.1| DNA mismatch repair protein, partial [Francisella halioticida]
Length = 772
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 44/113 (38%), Positives = 59/113 (52%), Gaps = 14/113 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG +A EKF +IG T+FATHY + + + N+ + E K
Sbjct: 671 RGTSTFDGLSLAEACAEKFAKIGSFTLFATHYFELTELVDKYLNIKNIHFEAKEYK---- 726
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
D I F++K V G KS+G VA+LAGIP DV+K A+ NL +L
Sbjct: 727 -DNIYFMHKAVEGAAKKSYGIQVAKLAGIPSDVLK---------SAKQNLHKL 769
>gi|332019050|gb|EGI59582.1| DNA mismatch repair protein Msh2 [Acromyrmex echinatior]
Length = 857
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 38/99 (38%), Positives = 58/99 (58%), Gaps = 8/99 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T +GC IA E + I +FATH+H + + E P V ++++ +ED
Sbjct: 685 RGTSTYEGCGIAWSIAEHLARNIKSYCLFATHFHEITKLAEEIPAVKNQHVTALVED--- 741
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
D + LYK++PGIC +SFG +VA++A P DV++F
Sbjct: 742 ---DKLTLLYKVMPGICDQSFGLHVAKMANFPSDVIEFA 777
>gi|392589317|gb|EIW78648.1| DNA mismatch repair protein Msh6 [Coniophora puteana RWD-64-598 SS2]
Length = 1270
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 48/117 (41%), Positives = 60/117 (51%), Gaps = 8/117 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGC-LTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L + LT FATHY S+ PN+ +MS + D D
Sbjct: 1104 RGTSTYDGMAIAGAVLHQLATHTLPLTFFATHYGSLTDDFAYHPNIRNMHMSTLVD---D 1160
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTV----AFQMEARHNLRQ 501
+VFLYKLV G+ SFG +VA LAG+P VV+ V A Q +A+ RQ
Sbjct: 1161 EKRELVFLYKLVDGVATGSFGTHVANLAGVPSSVVERADVVSKDFAKQFKAKLEDRQ 1217
Score = 63.9 bits (154), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 34/77 (44%), Positives = 42/77 (54%), Gaps = 7/77 (9%)
Query: 178 ILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYE--- 234
+ D D P P Y+P+TLYVP K+ TP Q+W IK +FD VLFF+ GKF E
Sbjct: 316 VRDKDGIKPGEPGYDPRTLYVPKSAWKQFTPFEKQFWEIKQNHFDTVLFFQKGKFLEARS 375
Query: 235 ----LFHMDAVIGADEL 247
L+ DA IG E
Sbjct: 376 YQESLYEDDARIGHREF 392
>gi|344255402|gb|EGW11506.1| DNA mismatch repair protein Msh3 [Cricetulus griseus]
Length = 851
Score = 72.0 bits (175), Expect = 9e-10, Method: Compositional matrix adjust.
Identities = 50/151 (33%), Positives = 81/151 (53%), Gaps = 14/151 (9%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEP-NVAFEYMSYIED--- 444
RGT T+DG IA TLE F++ + LT+F THY V + P V +M ++ D
Sbjct: 699 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKCYPEQVGNYHMGFLVDEDE 758
Query: 445 -KRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K+ G D++ FLY++ GI +S+G NVA+LA +P +++K + ++E N
Sbjct: 759 SKQESGNMEQVPDSVTFLYQITRGIASRSYGLNVAKLADVPGEILKKAAHKSKELEGLVN 818
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQKALESV 529
LR+ + F L + DV++L +E +
Sbjct: 819 LRRKRLKYFTDLWTTH---DVKDLHTCIEDL 846
>gi|255728741|ref|XP_002549296.1| hypothetical protein CTRG_03593 [Candida tropicalis MYA-3404]
gi|240133612|gb|EER33168.1| hypothetical protein CTRG_03593 [Candida tropicalis MYA-3404]
Length = 1222
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 35/92 (38%), Positives = 56/92 (60%), Gaps = 2/92 (2%)
Query: 152 TSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMG 211
T TP+ + + Y++L +I DA++R+ P+Y+P+TLY+P K T
Sbjct: 271 TKSATPTKKSFEKENEERYEWLV--NIRDAEKRTVDDPEYDPRTLYIPQSAWSKFTNFEK 328
Query: 212 QWWTIKSQNFDCVLFFKVGKFYELFHMDAVIG 243
Q+W IKS+ ++ V+FF+ GKFYEL+ DA+I
Sbjct: 329 QYWGIKSKMWNTVVFFQKGKFYELYENDAIIA 360
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 44/140 (31%), Positives = 64/140 (45%), Gaps = 15/140 (10%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L + L FATHY ++ + P + M + D +
Sbjct: 1058 RGGSSSDGFSIAESVLHHLATHLQSLGFFATHYGTLGLSFKTHPQIKQLRMGIVVDNNSR 1117
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
I FLYKL G P+SFG NVA + GIPE++V A + E L++L
Sbjct: 1118 NI---TFLYKLEEGTAPRSFGMNVAAMCGIPEEIVDNAERAANEYEQTSKLKKL------ 1168
Query: 509 SLVKSGEKVDVEELQKALES 528
E+ DV ++ L+S
Sbjct: 1169 -----AEESDVHDISLGLQS 1183
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 74/128 (57%), Gaps = 17/128 (13%)
Query: 267 LCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDE---VMDEIKS 323
L NY S P +MSEL+ +E++FD ++A S IIP +GVD+++DE ++ +++S
Sbjct: 751 LYNYLSSFPH----EMSELIDQWEDSFDREQAKS-DVIIPASGVDEQFDESQTLLGDLES 805
Query: 324 -IEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVE 382
+ ++++ Y RT + C Y ++ K+ Y++EVP K + + Q AT K V+
Sbjct: 806 QLNQKLKEYKRTYKSQSIC---YRDSGKEI--YLIEVPVKL-NVPQDWQQMGATSK--VK 857
Query: 383 NYVTPECR 390
Y +PE +
Sbjct: 858 RYWSPEVK 865
>gi|380487441|emb|CCF38039.1| DNA mismatch repair protein msh6, partial [Colletotrichum
higginsianum]
Length = 141
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/67 (46%), Positives = 46/67 (68%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+I+D +++ P PD++P T+Y+PP K +P Q+W IK + +D V+FFK GKFYEL+
Sbjct: 59 NIVDINKKPPGDPDHDPSTVYIPPMAWNKFSPFEKQYWEIKQKLWDTVVFFKKGKFYELY 118
Query: 237 HMDAVIG 243
DA IG
Sbjct: 119 ENDATIG 125
>gi|170100210|ref|XP_001881323.1| predicted protein [Laccaria bicolor S238N-H82]
gi|164644002|gb|EDR08253.1| predicted protein [Laccaria bicolor S238N-H82]
Length = 1291
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/74 (43%), Positives = 46/74 (62%), Gaps = 2/74 (2%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
Y FL I D D R P P+Y+P+T+++P K TP Q+W IK ++D +LFF+
Sbjct: 341 YSFLA--DIKDKDGRRPGEPNYDPRTIFIPKSAWKDFTPFETQFWEIKQNHYDTILFFQK 398
Query: 230 GKFYELFHMDAVIG 243
GKF+EL+ DA +G
Sbjct: 399 GKFFELYEDDARVG 412
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/104 (39%), Positives = 57/104 (54%), Gaps = 8/104 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGC-LTVFATHYHSVARRLREEPNVAFEYMSYI--EDKR 446
RGT T DG IA L + L+ FATHY S+ PN+ +MS I E+KR
Sbjct: 1125 RGTSTFDGMAIAAAVLHQLATHTLPLSFFATHYSSLTDDFAYHPNIRNMHMSTIVDEEKR 1184
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
+ +VF++KLV G+ SFG +VA LAG+P VV+ ++
Sbjct: 1185 D-----LVFMFKLVEGVAESSFGTHVANLAGVPLPVVERADVIS 1223
>gi|431907876|gb|ELK11483.1| DNA mismatch repair protein Msh3 [Pteropus alecto]
Length = 1080
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/145 (33%), Positives = 80/145 (55%), Gaps = 13/145 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLRE-EPNVAFEYMSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + V +M ++ E
Sbjct: 924 RGTSTHDGIAIAYATLEHFIRDVKSLTLFVTHYPPVCELEKSYSQQVGNYHMGFLVNENE 983
Query: 444 DKRNDGIDTI----VFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
K++ G + + FLY++ GI +S+G NVA+LA +PE+++K + + ++E N+
Sbjct: 984 SKQDPGEEEVPEFVTFLYQITRGIAARSYGLNVAKLADVPEEILKKAASKSKELEGLVNM 1043
Query: 500 RQLFIHKFASLVKSGEKVDVEELQK 524
++ + FA L D ++LQK
Sbjct: 1044 KRKRLKCFAKLWTIN---DAKDLQK 1065
>gi|400602832|gb|EJP70430.1| MutS domain V [Beauveria bassiana ARSEF 2860]
Length = 1206
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 79/297 (26%), Positives = 116/297 (39%), Gaps = 55/297 (18%)
Query: 233 YELFHMDAVIGADELAC--SYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFE 290
YEL+ + A+ +L C S K S C GE + Q F D L FE
Sbjct: 891 YELW-LSAIQVIAQLDCLVSLAKASLCLGEPSCRPQ------------FVDQDRSLVEFE 937
Query: 291 NAFDHKEASSAGNIIP---KAGVDKEYDEVMDEIKSIEKEIQTYLRTQC-----AHFGCT 342
S+ G+ IP K G ++ ++ + K T LR C A GC
Sbjct: 938 ELRHPCMLSTNGDFIPNDIKLGGEQANINLLTGANAAGK--STVLRMSCIAVIMAQIGCY 995
Query: 343 VIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKK---------KNVENYVTPEC---- 389
V A+ L + S+ +N A++ K + + TP
Sbjct: 996 VPAISAK-------LTPVDRIMSRLGANDNIFASQSTFFVELSETKKILSEATPRSLVIL 1048
Query: 390 ----RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIE 443
RGT + DG +A+ L IGC+ FATHYHS+A P + M +++
Sbjct: 1049 DELGRGTSSYDGVAVAQAVLHHVATHIGCVGFFATHYHSIATEFENHPEIRARRMQIHVD 1108
Query: 444 DKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR 500
D+ I FLYKL G+ SFG + A + GI V++ A + E L+
Sbjct: 1109 DQER----RITFLYKLEDGVAEGSFGMHCAAMCGISNSVIERAEVAAKEWEHTSRLK 1161
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 33/137 (24%), Positives = 72/137 (52%), Gaps = 13/137 (9%)
Query: 243 GADELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAG 302
G +++ + S G + LL +L + PD+ E L Y+ NAFD +A
Sbjct: 724 GFEQIEYTMTLVSAFKGSNGLLDRLIS--------AMPDLEEPLAYWRNAFDRPKAKQDK 775
Query: 303 NIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGC-TVIYSEAQKKQKKYVLEVPS 361
+IP+ G+++++D ++ I++I+ ++Q L + C ++ +++ K + Y +E P
Sbjct: 776 ILIPERGIEEDFDASLERIETIKSQLQELLADKKVELKCKSLKFTDVGK--EIYQIEAPK 833
Query: 362 KYASKAKSNHQRVATKK 378
A+K S+ +++++ K
Sbjct: 834 --ATKVPSSWRQMSSTK 848
>gi|392562069|gb|EIW55250.1| DNA mismatch repair protein Msh6 [Trametes versicolor FP-101664
SS1]
Length = 1247
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%)
Query: 178 ILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFH 237
+ D D P P Y+P+TLY+PP TP Q+W IK +FD +LFF+ GKF EL+
Sbjct: 297 VRDKDEVRPGQPGYDPRTLYIPPRAWTSFTPFEKQFWEIKQNHFDTILFFQKGKFLELYE 356
Query: 238 MDAVIGADEL 247
DA +G E
Sbjct: 357 EDARVGHREF 366
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/103 (38%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYM-SYIEDKRN 447
RGT T DG IA L + L+ FATHY S+ PN+ +M + ++D++
Sbjct: 1079 RGTSTYDGMAIAAAVLHELATHTLSLSFFATHYGSLTDDFAYHPNIRNMHMQTLVDDEKR 1138
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
+ +VFLYKLV G+ SFG +VA LAG+P VV+ V+
Sbjct: 1139 E----LVFLYKLVEGVASSSFGTHVANLAGVPLAVVERAEVVS 1177
>gi|145480193|ref|XP_001426119.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124393192|emb|CAK58721.1| unnamed protein product [Paramecium tetraurelia]
Length = 1103
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/128 (33%), Positives = 72/128 (56%), Gaps = 11/128 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG +A L +FL + +T+FATHYH + N++ M + ++K
Sbjct: 979 RGTSTYDGVALASAVL-RFLSDKTKPMTLFATHYHILLDEFALFKNISQCVMKHYQEK-- 1035
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQM---EARHNLRQLFI 504
D +VF YKL+ G+ KSF NVA++AG+P++V+K + ++ E++ N + +
Sbjct: 1036 ---DQVVFKYKLIEGVAEKSFATNVAQIAGVPKEVIKKAKQMEAKITKEESKINKNREIL 1092
Query: 505 HKFASLVK 512
KF ++K
Sbjct: 1093 KKFNQIIK 1100
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 172 FLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGK 231
F+ P+HI D++ R P PDYNP T+ +P + +K P Q+W K + D ++FF+ G+
Sbjct: 128 FMQPEHIRDSEGRRPDEPDYNPSTIDIPNDQYQKLPPMFRQYWNAKKNHLDSMIFFRCGR 187
Query: 232 FYELFHMDAVIGA 244
+ + + DA+I A
Sbjct: 188 WIAVMYNDAIIVA 200
>gi|303391044|ref|XP_003073752.1| MutS-like DNA mismatch repair protein [Encephalitozoon intestinalis
ATCC 50506]
gi|303302900|gb|ADM12392.1| MutS-like DNA mismatch repair protein [Encephalitozoon intestinalis
ATCC 50506]
Length = 925
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 54/94 (57%), Gaps = 8/94 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG IAR L+ + GC +F+THYH + +RE V+ YM+ ++
Sbjct: 815 RGTSTRDGECIARAVLDYLKERGCHVLFSTHYHRI---IREVEGVSNGYMNSTVKGKD-- 869
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
IVFLYKL+ G S G VA +AG+PE++V
Sbjct: 870 ---IVFLYKLMDGTSWDSHGLYVARMAGVPEEIV 900
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/76 (43%), Positives = 45/76 (59%), Gaps = 2/76 (2%)
Query: 169 HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFK 228
Y+FL + I D + R Y+P TL +P + TP Q+W IK +FD ++FFK
Sbjct: 95 RYKFL--EDIRDRNGRRVGEEGYDPSTLLIPKSEYNRFTPFEKQFWDIKKDHFDTIVFFK 152
Query: 229 VGKFYELFHMDAVIGA 244
GKFYEL+ DA+IGA
Sbjct: 153 KGKFYELYENDALIGA 168
>gi|257457556|ref|ZP_05622723.1| DNA mismatch repair protein MutS [Treponema vincentii ATCC 35580]
gi|257444942|gb|EEV20018.1| DNA mismatch repair protein MutS [Treponema vincentii ATCC 35580]
Length = 880
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 43/99 (43%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IAR E LQ IG T+FATHYH +A+ + P + + E +
Sbjct: 720 RGTSTGDGFSIARAVSEYLLQTIGAKTLFATHYHELAQLI--HPRLQRLCLDVAETE--- 774
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGT 487
IVFL K++ GI S+G +VAELAG+PE V++ T
Sbjct: 775 --GKIVFLKKVIEGIAAHSYGVHVAELAGLPETVIRRAT 811
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 33/50 (66%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESG 256
TP M Q+ +IK+Q D VLFF++G FYE+F+ DA+ + L + + +G
Sbjct: 8 TPMMQQYLSIKAQYKDAVLFFRLGDFYEMFNDDAIEVSKLLNLTLTQRTG 57
>gi|269859802|ref|XP_002649625.1| DNA mismatch repair protein Msh6 [Enterocytozoon bieneusi H348]
gi|220066988|gb|EED44457.1| DNA mismatch repair protein Msh6 [Enterocytozoon bieneusi H348]
Length = 894
Score = 71.6 bits (174), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 52/96 (54%), Gaps = 10/96 (10%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT DG IA L+ IGC +F+THYH +A + +E + Y D
Sbjct: 798 RGTSIRDGTAIAESVLKYLQTIGCFVLFSTHYHVLANQFQEVDKYSMAY---------DL 848
Query: 450 IDT-IVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
I+ IVF YKL GI S+G VA+LAG+PE +++
Sbjct: 849 INNQIVFKYKLSSGIVDNSYGIYVAKLAGVPEKILQ 884
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 33/77 (42%), Positives = 48/77 (62%), Gaps = 2/77 (2%)
Query: 169 HY--QFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLF 226
HY +F +I D + +P HP+Y+P TL++ E K TP Q+W IK ++D ++F
Sbjct: 68 HYTDRFKFLINIRDKNGNAPDHPEYDPTTLFIDKESESKFTPFEKQFWEIKKNHWDKIVF 127
Query: 227 FKVGKFYELFHMDAVIG 243
FK GKFYEL+ +DA I
Sbjct: 128 FKKGKFYELYEIDADIA 144
>gi|351706766|gb|EHB09685.1| DNA mismatch repair protein Msh3, partial [Heterocephalus glaber]
Length = 1071
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEY-MSYIEDK-- 445
RGT T+DG IA TLE F++ I LT+F THY + R P Y M ++ K
Sbjct: 916 RGTSTHDGIAIAYATLEYFIRDIKSLTLFVTHYPPLCELERSYPGQVGNYHMGFLVTKDE 975
Query: 446 ------RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
+ + D + FLY++ G+ +S+G NVA+LA +P +V+K + ++E N+
Sbjct: 976 GQAGPGKEEVPDFVTFLYQITRGVAARSYGLNVAKLADVPGEVLKKAAHKSKELEGLINM 1035
Query: 500 RQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQT 536
++ + S +K E+L++ ++ + E+QT
Sbjct: 1036 KR---KRLKSFLKLWTTHSTEDLREWMDEFEVEETQT 1069
>gi|449329992|gb|AGE96258.1| DNA mismatch repair protein of the muts family [Encephalitozoon
cuniculi]
Length = 922
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG IAR LE + C +F+THYH + + E V+ YMS + R+
Sbjct: 819 RGTSTKDGGCIARAVLEYLKKKECHVLFSTHYHGI---IGEVEGVSNGYMSSVIKGRD-- 873
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
IVFLYKLV G+ S G VA +AG+P+ +V+
Sbjct: 874 ---IVFLYKLVAGVSGDSHGLYVARMAGVPDAIVE 905
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%)
Query: 191 YNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGA 244
Y+P TL +P KK TP Q+W IK FD ++FFK GKFYEL+ DA++GA
Sbjct: 121 YDPSTLLIPEHEYKKFTPFEKQFWDIKKDYFDTIVFFKKGKFYELYENDALVGA 174
>gi|328792194|ref|XP_001121207.2| PREDICTED: DNA mismatch repair protein Msh2 [Apis mellifera]
Length = 920
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 61/99 (61%), Gaps = 8/99 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T +GC IA ++ ++L +I C +FATH+H + + E V ++++ + D
Sbjct: 748 RGTSTYEGCGIAW-SIAEYLAKEIKCYCLFATHFHEITKLEEEISTVKNQHVTALVDN-- 804
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
+ + LYK+ PGIC +SFG +VA++A P+DV++F
Sbjct: 805 ---NKLTLLYKIKPGICDQSFGIHVAKMANFPQDVIEFA 840
>gi|291534090|emb|CBL07203.1| DNA mismatch repair protein MutS [Megamonas hypermegale ART12/1]
Length = 810
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/123 (37%), Positives = 71/123 (57%), Gaps = 9/123 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IAR +E IG T+FATHYH + L ++ +V Y +++K +D
Sbjct: 691 RGTSTYDGMSIARAVIEHIRDHIGAKTLFATHYHELTD-LEDDVHVK-NYCIAVKEKGSD 748
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME--ARHNLRQLFIHK 506
+ FL +++ G KS+G +VA+LAG+P++VVK T+ +E A + LF+ K
Sbjct: 749 ----VTFLRRIIRGSADKSYGIHVAKLAGLPQEVVKRAETILIDLENTAPTKEKLLFLKK 804
Query: 507 FAS 509
F +
Sbjct: 805 FLT 807
Score = 45.1 bits (105), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 19/47 (40%), Positives = 31/47 (65%)
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
M Q+ T+K+ + D +LFF++G FYE+F DA++ + EL + K S
Sbjct: 1 MMQQYQTVKNAHPDQILFFRLGDFYEMFLDDAILVSKELELTLTKRS 47
>gi|19074680|ref|NP_586186.1| DNA MISMATCH REPAIR PROTEIN OF THE MUTS FAMILY [Encephalitozoon
cuniculi GB-M1]
gi|19069322|emb|CAD25790.1| DNA MISMATCH REPAIR PROTEIN OF THE MUTS FAMILY [Encephalitozoon
cuniculi GB-M1]
Length = 922
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/95 (42%), Positives = 54/95 (56%), Gaps = 8/95 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG IAR LE + C +F+THYH + + E V+ YMS + R+
Sbjct: 819 RGTSTKDGGCIARAVLEYLKKKECHVLFSTHYHGI---IGEVEGVSNGYMSSVIKGRD-- 873
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
IVFLYKLV G+ S G VA +AG+P+ +V+
Sbjct: 874 ---IVFLYKLVAGVSGDSHGLYVARMAGVPDAIVE 905
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 28/54 (51%), Positives = 36/54 (66%)
Query: 191 YNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGA 244
Y+P TL +P KK TP Q+W IK FD ++FFK GKFYEL+ DA++GA
Sbjct: 121 YDPSTLLIPEHEYKKFTPFEKQFWDIKKDFFDTIVFFKKGKFYELYENDALVGA 174
>gi|167517301|ref|XP_001742991.1| hypothetical protein [Monosiga brevicollis MX1]
gi|163778090|gb|EDQ91705.1| predicted protein [Monosiga brevicollis MX1]
Length = 1502
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/125 (32%), Positives = 72/125 (57%), Gaps = 2/125 (1%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEP-NVAFEYMSYIEDKRN 447
RGT T+DG IA TL+ + ++ CL++F THY ++A P +V +M+++++ +
Sbjct: 891 RGTSTHDGLAIAYATLKHLVTRVRCLSLFVTHYTALAELATAFPEHVRCYHMAFLQEDED 950
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKF 507
D I FLY+L G+ +S+G NVA LA +P +++ + ++E ++L K
Sbjct: 951 GPNDHISFLYQLRQGLAARSYGLNVARLAQLPSTLLQRAGVKSEELEQEVAQKRLGGIKI 1010
Query: 508 ASLVK 512
SL++
Sbjct: 1011 HSLLR 1015
Score = 41.2 bits (95), Expect = 1.6, Method: Compositional matrix adjust.
Identities = 58/232 (25%), Positives = 88/232 (37%), Gaps = 13/232 (5%)
Query: 24 KGKKTSKSPAKSEDDSPVTKRPRRKS-AKRVKSAIQSDSEPDDMLQDNGSEDEYVPPKAE 82
K K +KS + + D +P TK + + + + S SE + + PP A+
Sbjct: 12 KAKALAKSGSSANDGAPPTKTKKVNTDSLNALAHSTSKSESSPTRKKDAPSALVTPPSAK 71
Query: 83 VESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTP 142
+ E S P SE P + S + P +P TA P
Sbjct: 72 PQVEQTPPQRRVAAVPSTGSPKTPKSEVLAQPRTPKRSKRQSEGTASPASQP--TASPAP 129
Query: 143 STPSFPVSDTSETTPSTSGAQDWSHNHYQFLHPDHI-LDADRRSPKHPDYNPKTLYVPPE 201
TP+T+ D S Q P+ + L A RR + + + +
Sbjct: 130 QVDDLDNLRRESLTPATASTDDASSLQAQL--PELLALPAARRQQR-----VRQVLMAQA 182
Query: 202 FLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA--CSY 251
K TP Q+ IK Q+ D +L +VG Y+LF DA I A L+ C+Y
Sbjct: 183 RSAKLTPLEKQFVDIKCQHPDALLLLEVGYKYQLFGEDAAIAAKILSIYCAY 234
>gi|118376906|ref|XP_001021635.1| MutS domain III family protein [Tetrahymena thermophila]
gi|89303401|gb|EAS01389.1| MutS domain III family protein [Tetrahymena thermophila SB210]
Length = 1368
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/139 (33%), Positives = 71/139 (51%), Gaps = 9/139 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L ++ + CLT+F+THYH + + NV M + +
Sbjct: 1228 RGTSTFDGVSIAYGVLRYLVENVKCLTLFSTHYHMLVDEFKLYKNVQSYVMDFDYCSQQK 1287
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARH----NLRQLFI 504
ID F YK + G KSFG NVA++AG+P+ V+ + M + N+R++
Sbjct: 1288 KID---FKYKYIKGSSEKSFGVNVAKMAGLPDSVIDKAHKMEHYMNSEDQNIGNVRRI-T 1343
Query: 505 HKFASLVKSGEKVDVEELQ 523
KF S++++ + D LQ
Sbjct: 1344 QKFNSIIEAQHQSDDTLLQ 1362
Score = 42.0 bits (97), Expect = 0.94, Method: Compositional matrix adjust.
Identities = 22/78 (28%), Positives = 37/78 (47%), Gaps = 17/78 (21%)
Query: 172 FLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGK 231
FL ++ DA+ R P+Y+P TL++P + LKK+TP F+ G+
Sbjct: 302 FLTKKYLKDAEGRPVDDPEYDPSTLFIPIQELKKETP-----------------LFQFGR 344
Query: 232 FYELFHMDAVIGADELAC 249
+ F+ DA++ C
Sbjct: 345 NFVCFYTDAILMKKLFDC 362
>gi|149234545|ref|XP_001523152.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
gi|146453261|gb|EDK47517.1| conserved hypothetical protein [Lodderomyces elongisporus NRRL
YB-4239]
Length = 968
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 40/124 (32%), Positives = 67/124 (54%), Gaps = 8/124 (6%)
Query: 374 VATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFLQIG-CLTVFATHYHSVARRLREEP 432
+AT +N + RGT T DG +A + +Q+ C+T+FATH+H + + ++ P
Sbjct: 774 LATATRNSLIIIDELGRGTSTYDGFGLAWSISDHLIQVKKCITLFATHFHELNQLAKKYP 833
Query: 433 NVA--FEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
++Y+E++ D I +YK+ PG+ KSFG NVAE+ PE ++K A
Sbjct: 834 LEVENLHVVAYVENQ-----DDITLMYKIEPGVSNKSFGINVAEMVNFPEKIIKMAKRKA 888
Query: 491 FQME 494
++E
Sbjct: 889 EELE 892
>gi|60688441|gb|AAH91283.1| Msh3 protein, partial [Rattus norvegicus]
Length = 265
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 46/132 (34%), Positives = 74/132 (56%), Gaps = 11/132 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEP-NVAFEYMSYI--ED- 444
RGT T+DG IA TLE F++ + LT+F THY V + P V +M ++ ED
Sbjct: 97 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKRYPEQVGNYHMGFLVNEDG 156
Query: 445 -KRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K++ G D++ FLY++ GI +S+G NVA+LA +P ++++ + ++E N
Sbjct: 157 SKQDSGDMEQMPDSVTFLYQITRGIAARSYGLNVAKLADVPREILQKAAHKSKELEGLVN 216
Query: 499 LRQLFIHKFASL 510
LR+ + F L
Sbjct: 217 LRRKRLEYFIDL 228
>gi|406701259|gb|EKD04409.1| DNA mismatch repair-related protein [Trichosporon asahii var.
asahii CBS 8904]
Length = 1161
Score = 71.2 bits (173), Expect = 1e-09, Method: Compositional matrix adjust.
Identities = 32/70 (45%), Positives = 43/70 (61%)
Query: 178 ILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFH 237
I D D P P+Y+P+T+Y+P + TP Q+W IK ++D VLFF+ GKFYEL+
Sbjct: 248 IKDKDGNRPGDPEYDPRTIYIPKKSWGSFTPFERQFWEIKQNHYDTVLFFQKGKFYELYE 307
Query: 238 MDAVIGADEL 247
DA IG E
Sbjct: 308 NDAAIGHQEF 317
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA L L FATHY S+ PN+ +M+ +++D
Sbjct: 1004 RGTSTYDGMAIAGAVLHHLSTHTLPLGFFATHYGSLTDDFAYHPNIRNMHMAVHVDDTAG 1063
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
+VFLYKL+ G S G +VA+LAG+P+ VV
Sbjct: 1064 -----VVFLYKLIKGHAESSHGTHVAKLAGVPDAVV 1094
>gi|337754746|ref|YP_004647257.1| DNA mismatch repair protein MutS [Francisella sp. TX077308]
gi|336446351|gb|AEI35657.1| DNA mismatch repair protein MutS [Francisella sp. TX077308]
Length = 818
Score = 71.2 bits (173), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 60/116 (51%), Gaps = 20/116 (17%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVA---FEYMSYIEDKR 446
RGT T DG +A+ EKF +I LT+FATHY + + + N+ FE Y +D
Sbjct: 664 RGTSTFDGLSLAKACAEKFAKISSLTLFATHYFELTELVNQYQNIKNIHFEAKEYKDD-- 721
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
I F++K + G KS+G VA+LAGI DV++ A+ NLR L
Sbjct: 722 ------IFFMHKAIAGAAKKSYGIQVAKLAGISADVLE---------SAKKNLRDL 762
>gi|403234715|ref|ZP_10913301.1| DNA mismatch repair protein MutS [Bacillus sp. 10403023]
Length = 351
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 62/106 (58%), Gaps = 6/106 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A+ +E Q IG T+F+THYH + + N+ ++S IE+
Sbjct: 175 RGTSTYDGMALAQAIIEYIHQNIGAHTLFSTHYHELTDLESKLENLVNVHVSAIEEN--- 231
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
D +VFL+K+ G KS+G +VA+LA +PE+++K + Q+E
Sbjct: 232 --DNVVFLHKIKEGAADKSYGIHVAKLAELPENLIKRANEILSQLE 275
>gi|157841276|ref|NP_001103184.1| DNA mismatch repair protein Msh3 [Danio rerio]
gi|123232732|emb|CAM16159.1| novel protein similar to vertebrate mutS homolog 3 (E. coli) (MSH3)
[Danio rerio]
Length = 1083
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/121 (34%), Positives = 67/121 (55%), Gaps = 9/121 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEP-NVAFEYMSYI----- 442
RGT T+DG IA TLE F+ ++ C+T+F THY + P +V +M+++
Sbjct: 935 RGTSTHDGIAIAYATLESFIREVRCMTLFVTHYPPLCELEHLYPQHVGNYHMAFLLNEPE 994
Query: 443 --EDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR 500
D+ + I FLY+L+ G +S+G NVA LA IPE +++ + ++EA N R
Sbjct: 995 STSDEEEAQPEFITFLYQLIEGAAARSYGLNVARLAEIPESILRTAAFKSKELEALVNSR 1054
Query: 501 Q 501
+
Sbjct: 1055 R 1055
>gi|350423484|ref|XP_003493495.1| PREDICTED: DNA mismatch repair protein Msh2-like [Bombus impatiens]
Length = 921
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 61/99 (61%), Gaps = 8/99 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T +GC IA ++ ++L +I C +FATH+H + + E V ++++ + D
Sbjct: 749 RGTSTYEGCGIAW-SIAEYLAKEIKCYCLFATHFHEITKLEEEVSAVKNQHVTALVDD-- 805
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
+ + LYK+ PGIC +SFG +VA++A P+DV++F
Sbjct: 806 ---NKLTLLYKVKPGICDQSFGIHVAKMANFPQDVIEFA 841
>gi|442570230|sp|Q1DQ73.2|MSH3_COCIM RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|392867658|gb|EAS29089.2| DNA mismatch repair protein MSH3 [Coccidioides immitis RS]
Length = 1125
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/148 (31%), Positives = 79/148 (53%), Gaps = 8/148 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFE--YMSYIEDKR 446
RGT T+DG IA+ L+ ++ I LT+F THY ++ R PN +M + E +
Sbjct: 981 RGTSTHDGVAIAQAVLDYMVRDIRSLTLFITHYQHLSNLARTFPNGELRNVHMKFTESGK 1040
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL--FI 504
DG D I FLY++ G+ +S+G NVA LA IP V+ T + ++E + + L
Sbjct: 1041 -DGQD-ITFLYEVGEGVAHRSYGLNVARLANIPSSVLDVAYTKSAELEEKIKRKNLEGIA 1098
Query: 505 HKFASLVKSGEKVDVEELQKALESVKSF 532
+ ++++GE + E +++ L V+
Sbjct: 1099 KGLSRVLENGEN-EGELMERLLSEVEQL 1125
>gi|338741596|ref|YP_004678558.1| DNA mismatch repair protein mutS [Hyphomicrobium sp. MC1]
gi|337762159|emb|CCB67994.1| DNA mismatch repair protein mutS [Hyphomicrobium sp. MC1]
Length = 947
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 12/109 (11%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIG-CLTVFATHYH---SVARRLREEPNVAFEYMSYIEDK 445
RGT T DG IA T+E + +FATHYH ++ARRL + NV + +
Sbjct: 771 RGTATFDGLSIAWATVEYLHGVTKARALFATHYHELTALARRLDDIANVTMDVAEWH--- 827
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
DTIVFL+K+ PG +S+G VA+LAG+P+ VV V ++E
Sbjct: 828 -----DTIVFLHKVKPGAADRSYGIQVAKLAGLPDPVVARARQVLARLE 871
Score = 52.0 bits (123), Expect = 8e-04, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 33/54 (61%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGE 260
TP M Q+ IK+ N D +L++++G FYELF DAVI ++ L+ K GE
Sbjct: 36 TPSMAQYLEIKAANPDSLLWYRMGDFYELFFDDAVIASEALSIVLTKRGKHRGE 89
>gi|300706132|ref|XP_002995367.1| hypothetical protein NCER_101770 [Nosema ceranae BRL01]
gi|239604422|gb|EEQ81696.1| hypothetical protein NCER_101770 [Nosema ceranae BRL01]
Length = 920
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 68/220 (30%), Positives = 96/220 (43%), Gaps = 48/220 (21%)
Query: 293 FDHKEASSAGNIIPKAGVDKEYDE---VMDEIKSIEKEIQTYLRTQCA-----HFGCTVI 344
F+ E GN I K V +Y E ++ S T++RT C H GC V
Sbjct: 706 FNKIEVRGLGNPIYKEYVKNDYIEDQRILILTGSNMAGKSTFMRTFCLNTILFHMGCNVF 765
Query: 345 YSEAQ------------------KKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVT 386
SE + + + +++E+ SN R AT K V +
Sbjct: 766 ASEFKCPVFDRLYSRMGASDNLVRGESTFMVELLET------SNILRNATSKSLV---IM 816
Query: 387 PEC-RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFE--YMSYIE 443
E RGT T DG IA+ L I C F+THY ++ N F +M+ I
Sbjct: 817 DELGRGTSTKDGKSIAKAVLSYLQNINCRVFFSTHYQNLV-----SLNNGFSTGFMN-IC 870
Query: 444 DKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
K N ++FLYKLV GIC S G +VA+LAG+PE+++
Sbjct: 871 IKNN----IVIFLYKLVNGICEDSNGIHVAKLAGVPEEIL 906
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 53/113 (46%), Gaps = 4/113 (3%)
Query: 134 PKLTAPSTPSTPSFPVSDTS--ETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDY 191
PK ST S F +S +S E Y+FL +I D + R DY
Sbjct: 65 PKKIHKSTLSFSDFQISKSSDIEDNSDIHNNTKIKDTRYEFLL--NIRDKEGRHVNDADY 122
Query: 192 NPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGA 244
+ TLY+ K TP Q+W IK +D ++FFK GKFYEL+ DA I +
Sbjct: 123 DNTTLYISDHDFYKMTPFEKQFWEIKKDYWDTIVFFKKGKFYELYEKDADIAS 175
>gi|70994396|ref|XP_751995.1| DNA mismatch repair protein Msh6 [Aspergillus fumigatus Af293]
gi|66849629|gb|EAL89957.1| DNA mismatch repair protein Msh6, putative [Aspergillus fumigatus
Af293]
Length = 1213
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 12/145 (8%)
Query: 246 ELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNII 305
E + +K++G + E + Q SG PD+S LL+Y++ AFD +A G ++
Sbjct: 727 EYTITLLKDNGSSSEGVI--------GQLISG-MPDLSSLLEYWKTAFDRTKAKENGILV 777
Query: 306 PKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYAS 365
PK GV++++D + I+ + +++ L+ Q G T I K+ Y LEVP K +
Sbjct: 778 PKPGVEEDFDTSQERIEQLHRDLDNLLKRQRRELGSTAICYRDNGKE-IYQLEVPIKVKN 836
Query: 366 KAKSNHQRVATKKKNVENYVTPECR 390
K+ Q ATK+ V+ Y PE R
Sbjct: 837 IPKNWDQMSATKQ--VKRYYFPELR 859
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT + DG +A+ L IG + FATHYHS+A P + + M +++D+
Sbjct: 1053 RGTSSYDGVAVAQAVLHHVATHIGAMGFFATHYHSLAAEFDGHPEITPKRMKIHVDDEER 1112
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
I FLYKL G+ SFG + A + GIP V++ A Q E L++
Sbjct: 1113 ----RITFLYKLEDGVAEGSFGMHCASMCGIPNKVIERAEVAAKQWEHTSRLKE 1162
>gi|340709839|ref|XP_003393508.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein
Msh2-like [Bombus terrestris]
Length = 921
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 61/99 (61%), Gaps = 8/99 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T +GC IA ++ ++L +I C +FATH+H + + E V ++++ + D
Sbjct: 749 RGTSTYEGCGIAW-SIAEYLAKEIKCYCLFATHFHEITKLEEEVSAVKNQHVTALVDD-- 805
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
+ + LYK+ PGIC +SFG +VA++A P+DV++F
Sbjct: 806 ---NKLTLLYKVKPGICDQSFGIHVAKMANFPQDVIEFA 841
>gi|119177119|ref|XP_001240377.1| hypothetical protein CIMG_07540 [Coccidioides immitis RS]
Length = 1181
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFE--YMSYIEDKR 446
RGT T+DG IA+ L+ ++ I LT+F THY ++ R PN +M + E +
Sbjct: 1037 RGTSTHDGVAIAQAVLDYMVRDIRSLTLFITHYQHLSNLARTFPNGELRNVHMKFTESGK 1096
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME---ARHNL 499
DG D I FLY++ G+ +S+G NVA LA IP V+ T + ++E R NL
Sbjct: 1097 -DGQD-ITFLYEVGEGVAHRSYGLNVARLANIPSSVLDVAYTKSAELEEKIKRKNL 1150
>gi|410297266|gb|JAA27233.1| mutS homolog 3 [Pan troglodytes]
Length = 1131
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEY-MSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + + Y M ++ E
Sbjct: 973 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDE 1032
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K + G D + FLY++ GI +S+G NVA+LA +P +++K + ++E N
Sbjct: 1033 SKLDPGAAEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAAHKSKELEGLIN 1092
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQT 536
++ + FA L + ++LQK E K E+QT
Sbjct: 1093 TKRKRLKYFAKLWTMH---NAQDLQKWTEEFKMEETQT 1127
>gi|159125092|gb|EDP50209.1| DNA mismatch repair protein Msh6, putative [Aspergillus fumigatus
A1163]
Length = 1213
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/145 (31%), Positives = 75/145 (51%), Gaps = 12/145 (8%)
Query: 246 ELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNII 305
E + +K++G + E + Q SG PD+S LL+Y++ AFD +A G ++
Sbjct: 727 EYTITLLKDNGSSSEGVI--------GQLISG-MPDLSSLLEYWKTAFDRTKAKENGILV 777
Query: 306 PKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYAS 365
PK GV++++D + I+ + +++ L+ Q G T I K+ Y LEVP K +
Sbjct: 778 PKPGVEEDFDTSQERIEQLHRDLDNLLKRQRRELGSTAICYRDNGKE-IYQLEVPIKVKN 836
Query: 366 KAKSNHQRVATKKKNVENYVTPECR 390
K+ Q ATK+ V+ Y PE R
Sbjct: 837 IPKNWDQMSATKQ--VKRYYFPELR 859
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/114 (34%), Positives = 57/114 (50%), Gaps = 6/114 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT + DG +A+ L IG + FATHYHS+A P + + M +++D+
Sbjct: 1053 RGTSSYDGVAVAQAVLHHVATHIGAMGFFATHYHSLAAEFDGHPEITPKRMKIHVDDEER 1112
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
I FLYKL G+ SFG + A + GIP V++ A Q E L++
Sbjct: 1113 ----RITFLYKLEDGVAEGSFGMHCASMCGIPNKVIERAEVAAKQWEHTSRLKE 1162
>gi|375084995|ref|ZP_09731788.1| DNA mismatch repair protein MutS [Megamonas funiformis YIT 11815]
gi|374567644|gb|EHR38853.1| DNA mismatch repair protein MutS [Megamonas funiformis YIT 11815]
Length = 912
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 63/106 (59%), Gaps = 7/106 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IAR +E IG T+FATHYH + L ++ +V Y +++K +D
Sbjct: 696 RGTSTYDGMSIARAVIEHIRDHIGAKTLFATHYHELTD-LEDDVHVK-NYCIAVKEKGSD 753
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ FL +++ G KS+G +VA+LAG+P++VVK T+ +E
Sbjct: 754 ----VTFLRRIIRGSADKSYGIHVAKLAGLPQEVVKRAETILIDLE 795
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 33/51 (64%)
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
K TP M Q+ +K+ + D +LFF++G FYE+F DA++ + EL + K S
Sbjct: 2 KLTPMMQQYQAVKNAHPDQILFFRLGDFYEMFLDDAILVSKELELTLTKRS 52
>gi|410667733|ref|YP_006920104.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM
12270]
gi|409105480|gb|AFV11605.1| DNA mismatch repair protein MutS [Thermacetogenium phaeum DSM
12270]
Length = 881
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/107 (42%), Positives = 61/107 (57%), Gaps = 6/107 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGTGT DG IA +E +IG T+FATHYH + + VA ++ E+ +N
Sbjct: 706 RGTGTFDGIGIAWAIIEYIHDKIGARTIFATHYHQLTQLADILHGVANCSVAVQEEGQN- 764
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
IVFL+K+VPG KS+G VA LA +PE++V+ VA ME
Sbjct: 765 ----IVFLHKVVPGGTDKSYGIQVARLAHLPEELVQRAQEVAASMEG 807
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 21/41 (51%), Positives = 30/41 (73%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL 247
TP M Q+ +IK++ DC+LFF++G FYELF DA+ + EL
Sbjct: 5 TPLMNQYQSIKNKYPDCLLFFRLGDFYELFGEDAIKASKEL 45
>gi|359689895|ref|ZP_09259896.1| DNA mismatch repair protein MutS [Leptospira licerasiae serovar
Varillal str. MMD0835]
gi|418748920|ref|ZP_13305212.1| DNA mismatch repair protein MutS [Leptospira licerasiae str.
MMD4847]
gi|418757610|ref|ZP_13313797.1| DNA mismatch repair protein MutS [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|384115387|gb|EIE01645.1| DNA mismatch repair protein MutS [Leptospira licerasiae serovar
Varillal str. VAR 010]
gi|404275989|gb|EJZ43303.1| DNA mismatch repair protein MutS [Leptospira licerasiae str.
MMD4847]
Length = 852
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 45/109 (41%), Positives = 58/109 (53%), Gaps = 8/109 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCL--TVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IA LE ++ TVFATHYH + L P V +M +E
Sbjct: 688 RGTSTYDGMSIAWAILESLSEMHPRPKTVFATHYHELTE-LSRLPGVWNLHMETVEKD-- 744
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
D ++FL K+ PG KSFG VA+LAG+P+ VVK + ME+R
Sbjct: 745 ---DKVIFLRKVKPGKAKKSFGIYVAQLAGVPDSVVKRAAEILTDMESR 790
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 29/47 (61%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
TP M Q+ IK++ D +LFF++G FYE+F DA I + L + K
Sbjct: 21 TPMMRQYLEIKAKFPDSILFFRMGDFYEMFLEDAKIASAILDIALTK 67
>gi|303316169|ref|XP_003068089.1| DNA mismatch repair family protein [Coccidioides posadasii C735 delta
SOWgp]
gi|240107765|gb|EER25944.1| DNA mismatch repair family protein [Coccidioides posadasii C735 delta
SOWgp]
Length = 1125
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 64/116 (55%), Gaps = 8/116 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFE--YMSYIEDKR 446
RGT T+DG IA+ L+ ++ I LT+F THY ++ R PN +M + E +
Sbjct: 981 RGTSTHDGVAIAQAVLDYMVRDIRSLTLFITHYQHLSNLARTFPNGELRNVHMKFTESGK 1040
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME---ARHNL 499
DG D I FLY++ G+ +S+G NVA LA IP V+ T + ++E R NL
Sbjct: 1041 -DGQD-ITFLYEVGEGVAHRSYGLNVARLANIPSSVLDVAYTKSAELEEKIKRKNL 1094
>gi|242207757|ref|XP_002469731.1| predicted protein [Postia placenta Mad-698-R]
gi|220731151|gb|EED84998.1| predicted protein [Postia placenta Mad-698-R]
Length = 825
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 39/103 (37%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYM-SYIEDKRN 447
RGT T DG IA L + L+ FATHY S+ PN+ +M + ++D++
Sbjct: 621 RGTSTYDGMAIAGAVLHQLATHTLALSFFATHYGSLTDDFAYHPNIRNMHMETMVDDEKR 680
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
+ +VFLYKL+ G SFG +VA LAG+P DVV+ ++
Sbjct: 681 E----LVFLYKLIGGAASSSFGTHVASLAGVPSDVVERADIIS 719
Score = 63.5 bits (153), Expect = 3e-07, Method: Compositional matrix adjust.
Identities = 50/178 (28%), Positives = 75/178 (42%), Gaps = 40/178 (22%)
Query: 166 SHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVL 225
S + + FL + D D P P Y+P+TLY+PP+ K+ TP Q
Sbjct: 277 SEDPFYFLQ--DVRDKDGVRPGQPGYDPRTLYIPPQAWKEFTPFEKQ------------- 321
Query: 226 FFKVGKFYELFHMDAVIGADELACSYMKESGCTGESTLLTQLCNYESQTPSGCFPDMSEL 285
GKF EL+ DA IG E LTQ P+M+
Sbjct: 322 ---KGKFLELYEEDARIGHSEFDLK-------------LTQRVKMSMV----GVPEMA-- 359
Query: 286 LKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHFGCTV 343
++ F K+A ++P+ G DK YD++MDEI+ +E+E+ L+ G +
Sbjct: 360 FNFWAAKFLAKDAD---ELVPEDGKDKVYDDIMDEIRGLEEELDDELKAMERKLGRAI 414
>gi|389747671|gb|EIM88849.1| DNA mismatch repair protein Msh6 [Stereum hirsutum FP-91666 SS1]
Length = 1195
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/104 (41%), Positives = 56/104 (53%), Gaps = 8/104 (7%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI--EDKR 446
RGT T DG IA L + LT FATHY S+ PN+ +M + E+KR
Sbjct: 1029 RGTSTYDGMAIAGAVLHQLATHTLALTFFATHYGSLTDDFAYHPNIRNMHMETMVNEEKR 1088
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
+VFLYKL+ GI SFG +VA LAG+P +VV+ V+
Sbjct: 1089 E-----LVFLYKLIDGIASSSFGTHVANLAGVPLEVVQRAEVVS 1127
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 30/69 (43%), Positives = 42/69 (60%)
Query: 179 LDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHM 238
+D D+ P Y+P+TLY+P K+ +P Q+W IK ++D VLFF+ GKF EL+
Sbjct: 233 MDKDQVHPGQKGYDPRTLYIPKSVWKEFSPFETQFWEIKQNHYDTVLFFQKGKFLELYEE 292
Query: 239 DAVIGADEL 247
DA IG E
Sbjct: 293 DARIGHREF 301
>gi|37520602|ref|NP_923979.1| DNA mismatch repair protein MutS [Gloeobacter violaceus PCC 7421]
gi|44888168|sp|Q7NLT8.1|MUTS_GLOVI RecName: Full=DNA mismatch repair protein MutS
gi|35211596|dbj|BAC88974.1| DNA mismatch repair protein [Gloeobacter violaceus PCC 7421]
Length = 890
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 47/128 (36%), Positives = 62/128 (48%), Gaps = 14/128 (10%)
Query: 376 TKKKNVENYVTPEC--------RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVAR 426
T+ N+ N+ TP RGT T DG IA E I C T+FATHYH
Sbjct: 746 TETANILNHATPRSLVLLDEIGRGTATFDGLAIAWAVAEYLASHIRCRTIFATHYHE--- 802
Query: 427 RLREEPNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
L E +V +Y + + D IVFL+++ PG +S+G V LAG+P VV
Sbjct: 803 -LNELASVVSGVANY-QVTVQELADRIVFLHRVTPGGADRSYGIEVGRLAGLPPSVVARA 860
Query: 487 TTVAFQME 494
TV Q+E
Sbjct: 861 RTVLAQVE 868
>gi|357039434|ref|ZP_09101228.1| DNA mismatch repair protein mutS [Desulfotomaculum gibsoniae DSM
7213]
gi|355358333|gb|EHG06101.1| DNA mismatch repair protein mutS [Desulfotomaculum gibsoniae DSM
7213]
Length = 884
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/108 (42%), Positives = 59/108 (54%), Gaps = 7/108 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI-GCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IAR +E I G T+F+THYH + L P V +S E+
Sbjct: 701 RGTSTYDGISIARALVEYIHDIIGARTLFSTHYHELTD-LDSLPGVVNCTVSVHEEN--- 756
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
D I+FL K++PG KS+G VA LAG+PE V+K V +ME R
Sbjct: 757 --DEIIFLRKVLPGKVDKSYGIQVARLAGLPEKVLKRAQDVLRRMEIR 802
Score = 44.3 bits (103), Expect = 0.20, Method: Compositional matrix adjust.
Identities = 19/54 (35%), Positives = 30/54 (55%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGE 260
TP M Q+ IK + +L F++G FYE+F DA++ + +L + G GE
Sbjct: 4 TPMMQQYLQIKQNYQNYILMFRMGDFYEMFFDDALVASKDLEIALTARDGGGGE 57
>gi|380027167|ref|XP_003697302.1| PREDICTED: DNA mismatch repair protein Msh2-like [Apis florea]
Length = 919
Score = 70.9 bits (172), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 8/99 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T +GC IA ++ ++L +I C +FATH+H + + E V ++++ + D
Sbjct: 747 RGTSTYEGCGIAW-SIAEYLAKEIKCYCLFATHFHEITKLEEEISTVKNQHVTALVDD-- 803
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
+ + LYK+ PGIC +SFG +VA++A P+D+++F
Sbjct: 804 ---NKLTLLYKIKPGICDQSFGIHVAKMANFPQDIIEFA 839
>gi|390334498|ref|XP_001193092.2| PREDICTED: DNA mismatch repair protein Msh3-like [Strongylocentrotus
purpuratus]
Length = 1242
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 64/109 (58%), Gaps = 4/109 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPN-VAFEYMSYI--EDK 445
RGT T+DG IA T ++ + CLT+F THY +A P V +MS++ + +
Sbjct: 1096 RGTSTHDGVAIAFATARHLIEEVKCLTLFVTHYPPLAELSDHYPTQVGNFHMSFLLHDAE 1155
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
D ++ + FLY+LV G+ +S+G NVA LA IP+ +++ ++ + +E
Sbjct: 1156 DEDPVEKLTFLYQLVDGVAGRSYGLNVARLADIPDAILEKASSKSHDLE 1204
>gi|320101926|ref|YP_004177517.1| DNA mismatch repair protein MutS [Isosphaera pallida ATCC 43644]
gi|319749208|gb|ADV60968.1| DNA mismatch repair protein MutS [Isosphaera pallida ATCC 43644]
Length = 896
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 61/111 (54%), Gaps = 8/111 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG +A E +L IGC +FATHYH + +P + +S +E
Sbjct: 704 RGTSTFDGVSLAWAIAE-YLHDVIGCRALFATHYHELVDLETVKPGLRNANVSVLEQN-- 760
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
IVFL+++VPG +S+G +VA LAG+P V++ + Q+EA+H
Sbjct: 761 ---GEIVFLHRIVPGGADQSYGIHVARLAGVPNPVLERAKAILAQLEAQHR 808
>gi|87310334|ref|ZP_01092464.1| DNA mismatch repair protein [Blastopirellula marina DSM 3645]
gi|87286833|gb|EAQ78737.1| DNA mismatch repair protein [Blastopirellula marina DSM 3645]
Length = 873
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 41/109 (37%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A +E +IGC T+FATHYH + P V ++ E
Sbjct: 701 RGTSTYDGVSLAWSIVEYLHDKIGCRTLFATHYHELTDLRSSLPGVVNLNVAVKEWD--- 757
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARH 497
D ++FL+K+VPG KS+G VA LAG+P +V + + Q+E+ H
Sbjct: 758 --DKVIFLHKIVPGAADKSYGIYVARLAGVPREVNERAKQILNQLESEH 804
>gi|153004969|ref|YP_001379294.1| DNA mismatch repair protein MutS [Anaeromyxobacter sp. Fw109-5]
gi|189030440|sp|A7HC64.1|MUTS_ANADF RecName: Full=DNA mismatch repair protein MutS
gi|152028542|gb|ABS26310.1| DNA mismatch repair protein MutS [Anaeromyxobacter sp. Fw109-5]
Length = 882
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA E Q+GC T+FATHYH + RE P V ++ E
Sbjct: 709 RGTSTFDGVSIAWAVAEHLHDQVGCRTLFATHYHELQDLARERPAVRNLTVAVREVG--- 765
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
D +VFL KLV G +S+G VA+LAG+P +V+ + +EA
Sbjct: 766 --DRVVFLRKLVQGGASRSYGIEVAKLAGLPAEVLARAREILKNLEA 810
Score = 43.9 bits (102), Expect = 0.21, Method: Compositional matrix adjust.
Identities = 18/45 (40%), Positives = 28/45 (62%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSY 251
TP M Q+ K++ D +LFF++G FYELF DA+ ++ L +
Sbjct: 8 TPMMRQYLETKARYPDALLFFRLGDFYELFFEDALTASEALQITL 52
>gi|151554455|gb|AAI49795.1| MSH3 protein [Bos taurus]
Length = 361
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 48/149 (32%), Positives = 80/149 (53%), Gaps = 14/149 (9%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLRE-EPNVAFEYMSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + V +M ++ E
Sbjct: 208 RGTSTHDGIAIAYATLEHFIRDVKSLTLFVTHYPPVCELEKSYSQQVGNYHMGFLVNEDE 267
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K++ G D+++FLY++ GI +S+G NVA+LA +P +++K + + ++E N
Sbjct: 268 SKQDAGEEDQVPDSVIFLYQITRGIAARSYGLNVAKLADVPGEILKKAASKSKELEGLVN 327
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQKALE 527
+++ K K D ++LQK E
Sbjct: 328 MKR---KKLKCFTKLWTVNDAKDLQKWTE 353
>gi|354547057|emb|CCE43790.1| hypothetical protein CPAR2_500160 [Candida parapsilosis]
Length = 890
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 374 VATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEP 432
+AT N + RGT T DG +A E +Q C +FATH+H + + + P
Sbjct: 712 LATATSNSLLIIDELGRGTSTYDGFGLAWSISEHLIQHKKCFALFATHFHELNKLAEKYP 771
Query: 433 NVA--FEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
N ++Y+E+K D I +YK+ PGI KSFG NVAE+ P ++ A
Sbjct: 772 NSVENLHVVAYVENK-----DDITLMYKIEPGISSKSFGINVAEMVKFPTKIINMAKRKA 826
Query: 491 FQMEARHNLRQ 501
+++ NL++
Sbjct: 827 DELQNNENLKK 837
>gi|426200534|gb|EKV50458.1| hypothetical protein AGABI2DRAFT_141320 [Agaricus bisporus var.
bisporus H97]
Length = 1124
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 46/120 (38%), Positives = 62/120 (51%), Gaps = 10/120 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRL-REEP----NVAFEYMSYIE 443
RGT T DG IA L+ ++ T+F THY A + R+ P N+ Y Y+
Sbjct: 1005 RGTSTFDGMAIAGAVLQHLVEHTRSKTLFITHYPLTASEIERKYPKDVENIHMGY--YVS 1062
Query: 444 DKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA--FQMEARHNLRQ 501
D R DG I FLYK+ PGI +SFG A LA +P +++ TT A FQ + +RQ
Sbjct: 1063 DTRIDGTRDITFLYKVEPGITTESFGIECARLAQLPAPLLEAATTYAQDFQHKTEERIRQ 1122
>gi|336109958|gb|AEI16747.1| mutS protein 6 [Cylindrophis ruffus]
Length = 325
Score = 70.5 bits (171), Expect = 2e-09, Method: Compositional matrix adjust.
Identities = 26/42 (61%), Positives = 35/42 (83%)
Query: 212 QWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
+WW +KS NFD V+F+KVGKFYEL+HMDAV+G ++L +MK
Sbjct: 1 KWWELKSXNFDAVIFYKVGKFYELYHMDAVVGVNKLGLVFMK 42
>gi|449446175|ref|XP_004140847.1| PREDICTED: DNA mismatch repair protein MSH3-like [Cucumis sativus]
Length = 1094
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 59/113 (52%), Gaps = 8/113 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIG-CLTVFATHYHSVARRLREEPNVAFEY-MSYIEDKRN 447
RGT T+DG IA L LQ CL +F THY VA +E P A Y +SY+ ++
Sbjct: 907 RGTSTHDGVAIAYAALHSLLQQKKCLVLFVTHYPKVAEIAKEFPASAGVYHVSYLTSHKS 966
Query: 448 DGI------DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ + + +LYKL+ G+ SFGF VA+LA IP + T + +E
Sbjct: 967 PSLSGPKSTEDVTYLYKLISGVAESSFGFKVAQLAQIPLSCIARATEMGVWLE 1019
>gi|378754905|gb|EHY64933.1| hypothetical protein NERG_01989 [Nematocida sp. 1 ERTm2]
Length = 904
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 36/89 (40%), Positives = 44/89 (49%), Gaps = 2/89 (2%)
Query: 168 NHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFF 227
H FL P D R P Y+ TLY+ L TPC Q+W IK + FD ++FF
Sbjct: 97 THALFLSPP--FDKFGRKPGDLGYDKSTLYISERDLSAMTPCEEQFWRIKMEYFDTIVFF 154
Query: 228 KVGKFYELFHMDAVIGADELACSYMKESG 256
K GKFYELF DAV+ A+ K
Sbjct: 155 KKGKFYELFAEDAVLSAELFGLRLTKRGA 183
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 27/94 (28%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T +G I+ E ++ C ++ATH+ S + + + +Y Y+ + +N
Sbjct: 803 RGTSTKEGSAISMAVKEYLKKLRCTALYATHFFSAIKP--TDVTMKMDY-KYVINSQNH- 858
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
I++LY LV GIC S G ++ ++ +P+ V+
Sbjct: 859 -QEILYLYNLVMGICKDSCGIDICKMTKVPDSVI 891
>gi|381180540|ref|ZP_09889379.1| DNA mismatch repair protein MutS [Treponema saccharophilum DSM
2985]
gi|380767528|gb|EIC01528.1| DNA mismatch repair protein MutS [Treponema saccharophilum DSM
2985]
Length = 881
Score = 70.5 bits (171), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 47/114 (41%), Positives = 61/114 (53%), Gaps = 12/114 (10%)
Query: 373 RVATKKKNVENYVTPEC-RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLRE 430
R AT+K V + E RGT T DG IA E L I C T+FATHYH + R +
Sbjct: 699 RGATRKSLV---IMDEVGRGTSTEDGLSIAWAVSEYLLNTIQCKTLFATHYHELTRMV-- 753
Query: 431 EPNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
P++ M +ED D +VFL K+ G S+G +VA LAGIP+ V+K
Sbjct: 754 HPSLKLMCMDVLEDG-----DKVVFLRKMKEGASENSYGIHVASLAGIPQTVIK 802
Score = 41.6 bits (96), Expect = 1.3, Method: Compositional matrix adjust.
Identities = 19/35 (54%), Positives = 24/35 (68%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAV 241
TP M Q+ +K D VLFF+VG FYE+F+ DAV
Sbjct: 21 TPLMRQYQEMKETYKDEVLFFRVGDFYEMFNDDAV 55
>gi|426384231|ref|XP_004058675.1| PREDICTED: DNA mismatch repair protein Msh3 [Gorilla gorilla gorilla]
Length = 1128
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEY-MSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + + Y M ++ E
Sbjct: 970 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDE 1029
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K + G D + FLY++ GI +S+G NVA+LA +P +++K + ++E N
Sbjct: 1030 SKLDPGAAEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAAHKSKELEGLIN 1089
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQT 536
++ + FA L + ++LQK E K E+QT
Sbjct: 1090 TKRKRLKYFAKL---WTMPNAQDLQKWTEEFKMEETQT 1124
>gi|220926842|ref|YP_002502144.1| DNA mismatch repair protein MutS [Methylobacterium nodulans ORS
2060]
gi|219951449|gb|ACL61841.1| DNA mismatch repair protein MutS [Methylobacterium nodulans ORS
2060]
Length = 929
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 56/109 (51%), Gaps = 12/109 (11%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI-GCLTVFATHYH---SVARRLREEPNVAFEYMSYIEDK 445
RGT T DG IA LE ++ GC +FATH+H +ARRL N + + D
Sbjct: 763 RGTATFDGLSIAWACLEHLHEVTGCRALFATHFHELTGLARRLERLSNATLKVTEWKGD- 821
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+VFL+++VPG +S+G VA LAG+P V+ + +E
Sbjct: 822 -------VVFLHEVVPGAADRSYGLQVARLAGLPASVIARAKVILADLE 863
>gi|355704534|gb|AES02259.1| mutS-like protein 3 [Mustela putorius furo]
Length = 418
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/148 (29%), Positives = 79/148 (53%), Gaps = 10/148 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARR----LREEPNVAFEYMSYIED 444
RGT T+DG IA TLE F++ + LT+F THY V L++ N ++ ++
Sbjct: 262 RGTSTHDGIAIAYATLEHFIRDVKSLTLFVTHYPPVCELEKSYLQQVGNYHMGFLITEDE 321
Query: 445 KRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
+ D D + FLY++ GI +S+G NVA+LA +P +++K + + ++E N+
Sbjct: 322 SKEDSGEEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAASKSKELEGLVNM 381
Query: 500 RQLFIHKFASLVKSGEKVDVEELQKALE 527
++ + FA L + D+++ + E
Sbjct: 382 KRKRLKYFAELWMINDAKDLQKWRNEFE 409
>gi|332654851|ref|ZP_08420593.1| DNA mismatch repair protein MutS [Ruminococcaceae bacterium D16]
gi|332516194|gb|EGJ45802.1| DNA mismatch repair protein MutS [Ruminococcaceae bacterium D16]
Length = 866
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 61/109 (55%), Gaps = 8/109 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL---QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG IAR LE ++GC T+FATHYH + E P V + + KR
Sbjct: 707 RGTSTYDGMAIARSVLEYCADKRRLGCKTLFATHYHELTVLEGEIPGV--KNYNIAAKKR 764
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
D ++FL K+V G +S+G VA+LAG+P+ V+K + ++EA
Sbjct: 765 KD---QVIFLRKIVRGGADQSYGIEVAQLAGVPDRVIKRAREILKELEA 810
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 19/45 (42%), Positives = 30/45 (66%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL 247
+ + TP M Q+ +K +N D +LFF++G FYE+F DA + + EL
Sbjct: 1 MAELTPMMKQYLEMKDRNPDSILFFRLGDFYEMFFDDAKLVSKEL 45
>gi|241950279|ref|XP_002417862.1| mismatch DNA repair protein, mutS homologue, putative [Candida
dubliniensis CD36]
gi|223641200|emb|CAX45579.1| mismatch DNA repair protein, mutS homologue, putative [Candida
dubliniensis CD36]
Length = 1222
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 57/114 (50%), Gaps = 4/114 (3%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RG ++DG IA L + L FATHY ++ + P + + M I D ND
Sbjct: 1058 RGGSSSDGFAIAESVLHHLATHVQSLGFFATHYGTLGLSFKTHPQIKQQRMGIIVD--ND 1115
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
+ I FLYKL G PKSFG NVA + GIP+++V A E L+++
Sbjct: 1116 SRN-ITFLYKLETGTAPKSFGMNVASMCGIPDEIVDNAEIAAKAYEQTSKLKKM 1168
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 71/257 (27%), Positives = 115/257 (44%), Gaps = 44/257 (17%)
Query: 10 EKKGDSESSTPASSKGKKTSKSPAKSEDDSPVTKRPRRKSAKRVKSAIQSDSEPDDMLQD 69
EK + +S+P +S + + A+S+D+ V S+++ + +Q DSE
Sbjct: 125 EKTTAALNSSPVASTRRGKKINYAESDDEEEVF------SSRKKRRIVQDDSE------- 171
Query: 70 NGSEDEYVPPKAEVESESEHSSGEEELEESVEDPTPSS---SEAEVTPMKNGNKRGLSS- 125
E+++ P + + + + S + ++ ED P S + EV KN K+ LS
Sbjct: 172 EEEEEDFKPTDSGSDDDDDMSDFVVDDDDKDEDMGPVSDDDDDDEVVAPKNKTKKPLSKD 231
Query: 126 -------------------KSGQPTKKPKLTAPSTPSTPSFPVSDTSETTPSTSGAQDWS 166
+G + + P TP S TP + +
Sbjct: 232 KPKSSKPNSSSVSGILGRFDAGSSRQSSSVATPKPKRTP------ISTLTPPKKSFEKEN 285
Query: 167 HNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLF 226
YQ+L I DA++R HPDY+P+TLY+P K T Q+W IKS+ ++ V+F
Sbjct: 286 EERYQWLV--DIRDAEKRPADHPDYDPRTLYIPQSAWSKFTAFEKQYWQIKSKMWNTVVF 343
Query: 227 FKVGKFYELFHMDAVIG 243
F+ GKFYEL+ DAVI
Sbjct: 344 FQKGKFYELYENDAVIA 360
Score = 43.5 bits (101), Expect = 0.31, Method: Compositional matrix adjust.
Identities = 37/116 (31%), Positives = 68/116 (58%), Gaps = 14/116 (12%)
Query: 279 FP-DMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDE---VMDEIK-SIEKEIQTYLR 333
FP +M EL++ +E+AFD ++A + I+P G D+E+D M+++K ++K ++ Y R
Sbjct: 758 FPHEMCELIQQWEDAFDREQAKT-DTIVPSPGTDEEFDNSQASMEDLKCQLDKLLKEYKR 816
Query: 334 TQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPEC 389
T + C Y ++ K + Y++EVP K K S+ +++ + K V+ Y +PE
Sbjct: 817 TYKSQEIC---YRDSGK--EIYLIEVPFKL--KVPSDWKQMGSTSK-VKRYYSPEV 864
>gi|191639175|ref|YP_001988341.1| DNA mismatch repair protein MutS [Lactobacillus casei BL23]
gi|385820920|ref|YP_005857307.1| DNA mismatch repair protein mutS [Lactobacillus casei LC2W]
gi|238693005|sp|B3W9W4.1|MUTS_LACCB RecName: Full=DNA mismatch repair protein MutS
gi|190713477|emb|CAQ67483.1| DNA mismatch repair protein mutS [Lactobacillus casei BL23]
gi|327383247|gb|AEA54723.1| DNA mismatch repair protein mutS [Lactobacillus casei LC2W]
Length = 857
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 14/111 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYH---SVARRLREEPNVAFEYMSYIED 444
RGT T DG +A+ +E FL + T+F+THYH S++ L + NV ++ +E+
Sbjct: 691 RGTATYDGMALAQAIIE-FLHDHVHAKTLFSTHYHELTSLSDSLAKLKNV---HVGAVEE 746
Query: 445 KRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
N +VFL+K++PG KS+G +VA+LAG+P D++ T+ Q+EA
Sbjct: 747 HGN-----LVFLHKMMPGPADKSYGIHVAKLAGLPADLLARADTILKQLEA 792
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+TP M Q+ IK+Q D LF+++G FYELF+ DA+ GA L +
Sbjct: 7 ETPMMQQYNEIKAQYPDAFLFYRIGDFYELFNDDAIKGAQLLELT 51
>gi|149727014|ref|XP_001503905.1| PREDICTED: DNA mismatch repair protein Msh3 [Equus caballus]
Length = 1128
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 48/146 (32%), Positives = 78/146 (53%), Gaps = 14/146 (9%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLRE-EPNVAFEYMSYI---ED 444
RGT T+DG IA TLE F++ + LT+F THY V R V +M ++ +D
Sbjct: 971 RGTSTHDGIAIAYATLEHFIRDVKSLTLFVTHYPPVCELERSYSQQVGNYHMGFLVNEDD 1030
Query: 445 KRNDGI------DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
+ D D + FLY++ GI +S+G NVA+LA +P +++K + + ++E N
Sbjct: 1031 SKPDQGEEEQVPDFVTFLYQITKGIAARSYGLNVAKLADVPGEILKKAASKSKELEGLVN 1090
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQK 524
+++ + FA L D E+L+K
Sbjct: 1091 MKRKRLKCFAKLWTIN---DAEDLRK 1113
>gi|348587534|ref|XP_003479522.1| PREDICTED: DNA mismatch repair protein Msh3-like [Cavia porcellus]
Length = 1122
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 11/132 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEP-NVAFEYMSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V R P V +M ++ E
Sbjct: 951 RGTSTHDGIAIAYATLEYFIRDVKALTLFVTHYPPVCELERSYPGQVGNHHMGFLVTEAE 1010
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
+ + G D + FLY++ GI +S+G NVA+LA +P +++K + ++E N
Sbjct: 1011 GETDPGAAEEVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAALKSKELEGLIN 1070
Query: 499 LRQLFIHKFASL 510
++ + F L
Sbjct: 1071 TKRKRLKSFVKL 1082
>gi|340924203|gb|EGS19106.1| hypothetical protein CTHT_0057300 [Chaetomium thermophilum var.
thermophilum DSM 1495]
Length = 1151
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 62/116 (53%), Gaps = 3/116 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFE--YMSYIEDKR 446
RGT T+DG IA L+ + + CLT+F THY S+AR + + +M +
Sbjct: 999 RGTSTHDGAAIAHAVLDHVVRETKCLTLFITHYQSLARVAAGLGDGLIKCVHMRFSATTN 1058
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
+G + I FLY++ G+ +S+G NVA LA IP V+ + +ME +++L
Sbjct: 1059 EEGEEEITFLYEVADGVAHRSYGLNVARLARIPRKVLDVAAQKSREMEDGMKVKRL 1114
>gi|116495688|ref|YP_807422.1| DNA mismatch repair protein MutS [Lactobacillus casei ATCC 334]
gi|301067238|ref|YP_003789261.1| mismatch repair ATPase (mutS family) [Lactobacillus casei str.
Zhang]
gi|122262910|sp|Q035Z2.1|MUTS_LACC3 RecName: Full=DNA mismatch repair protein MutS
gi|116105838|gb|ABJ70980.1| DNA mismatch repair protein MutS [Lactobacillus casei ATCC 334]
gi|300439645|gb|ADK19411.1| Mismatch repair ATPase (MutS family) [Lactobacillus casei str.
Zhang]
Length = 857
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 14/111 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYH---SVARRLREEPNVAFEYMSYIED 444
RGT T DG +A+ +E FL + T+F+THYH S++ L + NV ++ +E+
Sbjct: 691 RGTATYDGMALAQAIIE-FLHDHVHAKTLFSTHYHELTSLSDSLAKLKNV---HVGAVEE 746
Query: 445 KRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
N +VFL+K++PG KS+G +VA+LAG+P D++ T+ Q+EA
Sbjct: 747 HGN-----LVFLHKMMPGPADKSYGIHVAKLAGLPADLLARADTILKQLEA 792
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+TP M Q+ IK+Q D LF+++G FYELF+ DA+ GA L +
Sbjct: 7 ETPMMQQYNEIKAQYPDAFLFYRIGDFYELFNDDAIKGAQLLELT 51
>gi|418011601|ref|ZP_12651355.1| DNA mismatch repair protein [Lactobacillus casei Lc-10]
gi|410551859|gb|EKQ25899.1| DNA mismatch repair protein [Lactobacillus casei Lc-10]
Length = 860
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 14/111 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYH---SVARRLREEPNVAFEYMSYIED 444
RGT T DG +A+ +E FL + T+F+THYH S++ L + NV ++ +E+
Sbjct: 694 RGTATYDGMALAQAIIE-FLHDHVHAKTLFSTHYHELTSLSDSLAKLKNV---HVGAVEE 749
Query: 445 KRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
N +VFL+K++PG KS+G +VA+LAG+P D++ T+ Q+EA
Sbjct: 750 HGN-----LVFLHKMMPGPADKSYGIHVAKLAGLPADLLARADTILKQLEA 795
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+TP M Q+ IK+Q D LF+++G FYELF+ DA+ GA L +
Sbjct: 10 ETPMMQQYNEIKAQYPDAFLFYRIGDFYELFNDDAIKGAQLLELT 54
>gi|417997028|ref|ZP_12637295.1| DNA mismatch repair protein [Lactobacillus casei M36]
gi|410533734|gb|EKQ08400.1| DNA mismatch repair protein [Lactobacillus casei M36]
Length = 860
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 14/111 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYH---SVARRLREEPNVAFEYMSYIED 444
RGT T DG +A+ +E FL + T+F+THYH S++ L + NV ++ +E+
Sbjct: 694 RGTATYDGMALAQAIIE-FLHDHVHAKTLFSTHYHELTSLSDSLAKLKNV---HVGAVEE 749
Query: 445 KRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
N +VFL+K++PG KS+G +VA+LAG+P D++ T+ Q+EA
Sbjct: 750 HGN-----LVFLHKMMPGPADKSYGIHVAKLAGLPADLLARADTILKQLEA 795
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+TP M Q+ IK+Q D LF+++G FYELF+ DA+ GA L +
Sbjct: 10 ETPMMQQYNEIKAQYPDAFLFYRIGDFYELFNDDAIKGAQLLELT 54
>gi|87122440|ref|ZP_01078320.1| DNA mismatch repair protein MutS [Marinomonas sp. MED121]
gi|86162233|gb|EAQ63518.1| DNA mismatch repair protein MutS [Marinomonas sp. MED121]
Length = 868
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/170 (30%), Positives = 79/170 (46%), Gaps = 22/170 (12%)
Query: 329 QTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASK-----AKSNHQRVATKKKNVEN 383
Q L T AH GC V A+ V + ++ S +S T+ N+ N
Sbjct: 631 QIALITLLAHTGCFV---PAEAANLSLVDRIFTRMGSSDDLAGGRSTFMVEMTETANILN 687
Query: 384 YVTPEC--------RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNV 434
TP+ RGT T DG +A ++ Q+ C +FATHY + E N
Sbjct: 688 NATPKSLVLMDEVGRGTSTFDGLSLAWSAVDHLANQVKCNVLFATHYFELTLLADELKNA 747
Query: 435 AFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
A +++ E + D+IVFL+K+ G +S+G VA+LAG+P DV++
Sbjct: 748 ANVHLTATEYE-----DSIVFLHKVHDGAASQSYGLQVAQLAGVPRDVIQ 792
>gi|418005962|ref|ZP_12645931.1| DNA mismatch repair protein [Lactobacillus casei UW1]
gi|410544982|gb|EKQ19290.1| DNA mismatch repair protein [Lactobacillus casei UW1]
Length = 860
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 14/111 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYH---SVARRLREEPNVAFEYMSYIED 444
RGT T DG +A+ +E FL + T+F+THYH S++ L + NV ++ +E+
Sbjct: 694 RGTATYDGMALAQAIIE-FLHDHVHAKTLFSTHYHELTSLSDSLAKLKNV---HVGAVEE 749
Query: 445 KRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
N +VFL+K++PG KS+G +VA+LAG+P D++ T+ Q+EA
Sbjct: 750 HGN-----LVFLHKMMPGPADKSYGIHVAKLAGLPADLLARADTILKQLEA 795
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+TP M Q+ IK+Q D LF+++G FYELF+ DA+ GA L +
Sbjct: 10 ETPMMQQYNEIKAQYPDAFLFYRIGDFYELFNDDAIKGAQLLELT 54
>gi|417999868|ref|ZP_12640073.1| DNA mismatch repair protein [Lactobacillus casei T71499]
gi|410538424|gb|EKQ12978.1| DNA mismatch repair protein [Lactobacillus casei T71499]
Length = 860
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 14/111 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYH---SVARRLREEPNVAFEYMSYIED 444
RGT T DG +A+ +E FL + T+F+THYH S++ L + NV ++ +E+
Sbjct: 694 RGTATYDGMALAQAIIE-FLHDHVHAKTLFSTHYHELTSLSDSLAKLKNV---HVGAVEE 749
Query: 445 KRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
N +VFL+K++PG KS+G +VA+LAG+P D++ T+ Q+EA
Sbjct: 750 HGN-----LVFLHKMMPGPADKSYGIHVAKLAGLPADLLARADTILKQLEA 795
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+TP M Q+ IK+Q D LF+++G FYELF+ DA+ GA L +
Sbjct: 10 ETPMMQQYNEIKAQYPDAFLFYRIGDFYELFNDDAIKGAQLLELT 54
>gi|227533756|ref|ZP_03963805.1| DNA mismatch repair protein mutS [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|385824105|ref|YP_005860447.1| DNA mismatch repair protein mutS [Lactobacillus casei BD-II]
gi|409998037|ref|YP_006752438.1| DNA mismatch repair protein MutS [Lactobacillus casei W56]
gi|417990532|ref|ZP_12631008.1| DNA mismatch repair protein [Lactobacillus casei A2-362]
gi|227188592|gb|EEI68659.1| DNA mismatch repair protein mutS [Lactobacillus paracasei subsp.
paracasei ATCC 25302]
gi|327386432|gb|AEA57906.1| DNA mismatch repair protein mutS [Lactobacillus casei BD-II]
gi|406359049|emb|CCK23319.1| DNA mismatch repair protein MutS [Lactobacillus casei W56]
gi|410534682|gb|EKQ09322.1| DNA mismatch repair protein [Lactobacillus casei A2-362]
Length = 860
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 14/111 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYH---SVARRLREEPNVAFEYMSYIED 444
RGT T DG +A+ +E FL + T+F+THYH S++ L + NV ++ +E+
Sbjct: 694 RGTATYDGMALAQAIIE-FLHDHVHAKTLFSTHYHELTSLSDSLAKLKNV---HVGAVEE 749
Query: 445 KRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
N +VFL+K++PG KS+G +VA+LAG+P D++ T+ Q+EA
Sbjct: 750 HGN-----LVFLHKMMPGPADKSYGIHVAKLAGLPADLLARADTILKQLEA 795
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+TP M Q+ IK+Q D LF+++G FYELF+ DA+ GA L +
Sbjct: 10 ETPMMQQYNEIKAQYPDAFLFYRIGDFYELFNDDAIKGAQLLELT 54
>gi|428185652|gb|EKX54504.1| Msh6 mismatch repair muts-like protein, meiosis and mitosis
[Guillardia theta CCMP2712]
Length = 1322
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/160 (32%), Positives = 77/160 (48%), Gaps = 20/160 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L + Q L +F+THY S+ R +V+ +M + D +
Sbjct: 1176 RGTSTFDGYAIAYSVLCHLVKQNRPLLLFSTHYKSITDEFRASKDVSLCHMDCLVD---E 1232
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLF-IHKF 507
G T+ FLYK G+ S+G + A+ AG+P+ V+ +E R +LR L + F
Sbjct: 1233 GSQTVTFLYKFKRGVASDSYGLHCAKAAGLPQAVIARAQACKSSLETRGSLRGLRQLSLF 1292
Query: 508 ASLVKSGEKVDVEELQKALESVKSFESQTKKDLEDLPGGV 547
S++ E D +EL + L DLE+L G V
Sbjct: 1293 KSVI---ELADNQELPRHL------------DLEELVGDV 1317
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 34/82 (41%), Positives = 47/82 (57%), Gaps = 2/82 (2%)
Query: 166 SHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVL 225
+ Y++L + + D+ + P Y+P+TLY+P T Q+W IK +NFD VL
Sbjct: 350 NQERYKWL--EDVKDSSGKRPGEDGYDPRTLYIPSSAYSSFTQFERQFWDIKRENFDVVL 407
Query: 226 FFKVGKFYELFHMDAVIGADEL 247
FFK GKFYE+F DA IG L
Sbjct: 408 FFKKGKFYEMFEGDADIGHKHL 429
>gi|417981445|ref|ZP_12622113.1| DNA mismatch repair protein [Lactobacillus casei 12A]
gi|410522448|gb|EKP97396.1| DNA mismatch repair protein [Lactobacillus casei 12A]
Length = 860
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 14/111 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYH---SVARRLREEPNVAFEYMSYIED 444
RGT T DG +A+ +E FL + T+F+THYH S++ L + NV ++ +E+
Sbjct: 694 RGTATYDGMALAQAIIE-FLHDHVHAKTLFSTHYHELTSLSDSLAKLKNV---HVGAVEE 749
Query: 445 KRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
N +VFL+K++PG KS+G +VA+LAG+P D++ T+ Q+EA
Sbjct: 750 HGN-----LVFLHKMMPGPADKSYGIHVAKLAGLPADLLARADTILKQLEA 795
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+TP M Q+ IK+Q D LF+++G FYELF+ DA+ GA L +
Sbjct: 10 ETPMMQQYNEIKAQYPDAFLFYRIGDFYELFNDDAIKGAQLLELT 54
>gi|239630091|ref|ZP_04673122.1| DNA mismatch repair protein mutS [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|417984263|ref|ZP_12624887.1| DNA mismatch repair protein [Lactobacillus casei 21/1]
gi|417987530|ref|ZP_12628085.1| DNA mismatch repair protein [Lactobacillus casei 32G]
gi|239527703|gb|EEQ66704.1| DNA mismatch repair protein mutS [Lactobacillus paracasei subsp.
paracasei 8700:2]
gi|410522850|gb|EKP97788.1| DNA mismatch repair protein [Lactobacillus casei 32G]
gi|410525891|gb|EKQ00786.1| DNA mismatch repair protein [Lactobacillus casei 21/1]
Length = 860
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 14/111 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYH---SVARRLREEPNVAFEYMSYIED 444
RGT T DG +A+ +E FL + T+F+THYH S++ L + NV ++ +E+
Sbjct: 694 RGTATYDGMALAQAIIE-FLHDHVHAKTLFSTHYHELTSLSDSLAKLKNV---HVGAVEE 749
Query: 445 KRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
N +VFL+K++PG KS+G +VA+LAG+P D++ T+ Q+EA
Sbjct: 750 HGN-----LVFLHKMMPGPADKSYGIHVAKLAGLPADLLARADTILKQLEA 795
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+TP M Q+ IK+Q D LF+++G FYELF+ DA+ GA L +
Sbjct: 10 ETPMMQQYNEIKAQYPDAFLFYRIGDFYELFNDDAIKGAQLLELT 54
>gi|418002999|ref|ZP_12643103.1| DNA mismatch repair protein [Lactobacillus casei UCD174]
gi|410543134|gb|EKQ17522.1| DNA mismatch repair protein [Lactobacillus casei UCD174]
Length = 860
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 14/111 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYH---SVARRLREEPNVAFEYMSYIED 444
RGT T DG +A+ +E FL + T+F+THYH S++ L + NV ++ +E+
Sbjct: 694 RGTATYDGMALAQAIIE-FLHDHVHAKTLFSTHYHELTSLSDSLAKLKNV---HVGAVEE 749
Query: 445 KRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
N +VFL+K++PG KS+G +VA+LAG+P D++ T+ Q+EA
Sbjct: 750 HGN-----LVFLHKMMPGPADKSYGIHVAKLAGLPADLLARADTILKQLEA 795
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+TP M Q+ IK+Q D LF+++G FYELF+ DA+ GA L +
Sbjct: 10 ETPMMQQYNEIKAQYPDAFLFYRIGDFYELFNDDAIKGAQLLELT 54
>gi|417993383|ref|ZP_12633732.1| DNA mismatch repair protein [Lactobacillus casei CRF28]
gi|410531855|gb|EKQ06571.1| DNA mismatch repair protein [Lactobacillus casei CRF28]
Length = 860
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 14/111 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYH---SVARRLREEPNVAFEYMSYIED 444
RGT T DG +A+ +E FL + T+F+THYH S++ L + NV ++ +E+
Sbjct: 694 RGTATYDGMALAQAIIE-FLHDHVHAKTLFSTHYHELTSLSDSLAKLKNV---HVGAVEE 749
Query: 445 KRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
N +VFL+K++PG KS+G +VA+LAG+P D++ T+ Q+EA
Sbjct: 750 HGN-----LVFLHKMMPGPADKSYGIHVAKLAGLPADLLARADTILKQLEA 795
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+TP M Q+ IK+Q D LF+++G FYELF+ DA+ GA L +
Sbjct: 10 ETPMMQQYNEIKAQYPDAFLFYRIGDFYELFNDDAIKGAQLLELT 54
>gi|418012708|ref|ZP_12652401.1| DNA mismatch repair protein [Lactobacillus casei Lpc-37]
gi|410556603|gb|EKQ30485.1| DNA mismatch repair protein [Lactobacillus casei Lpc-37]
Length = 860
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 42/111 (37%), Positives = 67/111 (60%), Gaps = 14/111 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYH---SVARRLREEPNVAFEYMSYIED 444
RGT T DG +A+ +E FL + T+F+THYH S++ L + NV ++ +E+
Sbjct: 694 RGTATYDGMALAQAIIE-FLHDHVHAKTLFSTHYHELTSLSDSLAKLKNV---HVGAVEE 749
Query: 445 KRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
N +VFL+K++PG KS+G +VA+LAG+P D++ T+ Q+EA
Sbjct: 750 HGN-----LVFLHKMMPGPADKSYGIHVAKLAGLPADLLARADTILKQLEA 795
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+TP M Q+ IK+Q D LF+++G FYELF+ DA+ GA L +
Sbjct: 10 ETPMMQQYNEIKAQYPDAFLFYRIGDFYELFNDDAIKGAQLLELT 54
>gi|114599390|ref|XP_526872.2| PREDICTED: DNA mismatch repair protein Msh3, partial [Pan
troglodytes]
Length = 653
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 14/158 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPN-VAFEYMSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + + V +M ++ E
Sbjct: 495 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDE 554
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K + G D + FLY++ GI +S+G NVA+LA +P +++K + ++E N
Sbjct: 555 SKLDPGAAEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAAHKSKELEGLIN 614
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQT 536
++ + FA L + ++LQK E K E+QT
Sbjct: 615 TKRKRLKYFAKLWTMH---NAQDLQKWTEEFKMEETQT 649
>gi|336375399|gb|EGO03735.1| hypothetical protein SERLA73DRAFT_119383 [Serpula lacrymans var.
lacrymans S7.3]
gi|336388457|gb|EGO29601.1| hypothetical protein SERLADRAFT_365596 [Serpula lacrymans var.
lacrymans S7.9]
Length = 1215
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/102 (42%), Positives = 54/102 (52%), Gaps = 4/102 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGC-LTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L + L FATHY ++ PNV +M+ + D D
Sbjct: 1049 RGTSTYDGMAIAGAVLHQLATHTLPLAFFATHYGTLTSDFAYHPNVRNMHMATLLD---D 1105
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
+VFLYKLV GI SFG +VA LAG+P +VVK V+
Sbjct: 1106 EKCELVFLYKLVEGIAESSFGTHVASLAGVPTEVVKRAEVVS 1147
Score = 40.0 bits (92), Expect = 3.1, Method: Compositional matrix adjust.
Identities = 32/126 (25%), Positives = 58/126 (46%), Gaps = 6/126 (4%)
Query: 270 YESQTPSGCF---PDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEK 326
+ES+T + PD++ +K E+ F + + N++P G D YDEVM EI +E+
Sbjct: 743 FESKTITSLLRSAPDLTPHIKNVESRFIVDKDTD--NLLPVEGKDDVYDEVMAEITELEE 800
Query: 327 EIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVT 386
+ + LR G T+ + + + K+ L V +K K + + K ++
Sbjct: 801 TLDSQLRKFEKKLGITLTWWHSAQGNKEIYL-VQTKVGQKNIPDDWTKSGGTKAAARWLV 859
Query: 387 PECRGT 392
P + T
Sbjct: 860 PSLQST 865
>gi|405123347|gb|AFR98112.1| DNA mismatch repair protein msh6 [Cryptococcus neoformans var. grubii
H99]
Length = 1213
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 49/155 (31%), Positives = 78/155 (50%), Gaps = 10/155 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGC-LTVFATHYHSVARRLREEPNVAFEYM-SYIEDKRN 447
RGT T DG IA L L FATHY S+ PN+ +M ++++D++
Sbjct: 1038 RGTSTYDGMAIAGAVLHHIATHSLPLGFFATHYGSLTDDFAYHPNIRRMHMQTHVDDEQK 1097
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKF 507
+VFLYKL+PG+ S G +VA +AG+P DVV +V+ Q + N + I++
Sbjct: 1098 Q----VVFLYKLIPGVAESSHGTHVARMAGVPLDVVLRAESVSQQFFSAFNDK--LINRR 1151
Query: 508 ASLVKSGEKVDVEELQKALESVKS--FESQTKKDL 540
S + + D L + ++ ++ SQ KK +
Sbjct: 1152 QSKMPIVAQADFAWLMRVVKGLEGAVISSQNKKGI 1186
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 73/263 (27%), Positives = 115/263 (43%), Gaps = 25/263 (9%)
Query: 4 DSKESPEKKGDSESSTPA--SSKGKKTSKSPAKSEDDSPV-TKRPRRKSAKRVKSAIQSD 60
D + +P K D+ +T SS GKK + +D+SPV T + RR AKR + D
Sbjct: 91 DDELTPPPKSDASDATKVGESSSGKKQDEDEEMDDDESPVMTMKGRR--AKRKVVYVDPD 148
Query: 61 SEPDDMLQDNGSEDEYVPPKAEVESESEHSSGEEEL---EESVEDPTPSSSEAEVTPMKN 117
S+ D + N E P+ ++ +SE +E + + + + E
Sbjct: 149 SDDDSEGEVNPKESNGRRPRKSLKEDSE----DEYMFDEADDAAMVAAALDDFEANKFSP 204
Query: 118 GNKRGLSSKSGQPTKKPKLTAPSTPSTPSFP-----VSDTSETTPSTSGAQ--------D 164
K + KP ++ T STP P + SE+ + A+ D
Sbjct: 205 SKSPSPPRKIAKAKAKPSASSKKTISTPVRPGPKPIANKGSESNSFLTAAERKKIQAKED 264
Query: 165 WSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCV 224
+ F +I D D P PDY+ +++ +P + + TP Q+W IK ++D V
Sbjct: 265 KRESEQCFDFLVNIRDKDGNRPDDPDYDKRSILIPKKSWTEFTPFEKQFWEIKQNHYDTV 324
Query: 225 LFFKVGKFYELFHMDAVIGADEL 247
LFF+ GKFYEL+ DA+IG E
Sbjct: 325 LFFQKGKFYELYEDDALIGHQEF 347
Score = 40.4 bits (93), Expect = 2.4, Method: Compositional matrix adjust.
Identities = 27/111 (24%), Positives = 52/111 (46%), Gaps = 5/111 (4%)
Query: 280 PDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAHF 339
PD+S ++K+ + ++ I+P G D+E D E++ IE+E+ L
Sbjct: 736 PDLSGMIKHIRGMYTIEQNEKTIAILPNPGADEECDAADAEVERIEEELNDTLEHVKKTL 795
Query: 340 GC--TVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPE 388
C V + AQ ++ + +++P+ + A+ A+ K+ Y TPE
Sbjct: 796 KCKEAVFWHSAQGGKEIFQIQLPASVKAPARWTK---ASGTKSHNRYYTPE 843
>gi|402225420|gb|EJU05481.1| hypothetical protein DACRYDRAFT_74703 [Dacryopinax sp. DJM-731 SS1]
Length = 1011
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 43/108 (39%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREE--PNVAFEYMSYIEDKR 446
RGT T DG IA L +Q I T+F THY +A L ++ +A +M +IE+ +
Sbjct: 848 RGTSTFDGMAIASAVLTYLVQDIKTKTLFITHYPLLASELEKQFPTQIANNHMDFIEEDK 907
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
DG I FLYKL G S+G A LAGIPE V++ T + +M
Sbjct: 908 LDGTVEINFLYKLTEGSARGSYGIECARLAGIPEAVLQSATIRSGEMR 955
>gi|320032462|gb|EFW14415.1| DNA mismatch repair protein Msh3 [Coccidioides posadasii str.
Silveira]
Length = 1190
Score = 70.1 bits (170), Expect = 3e-09, Method: Compositional matrix adjust.
Identities = 44/116 (37%), Positives = 63/116 (54%), Gaps = 8/116 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFE--YMSYIEDKR 446
RGT T+DG IA+ L+ ++ I LT+F THY ++ R PN +M + E +
Sbjct: 1046 RGTSTHDGVAIAQAVLDYMVRDIRSLTLFITHYQHLSNLARTFPNGELRNVHMKFTESGK 1105
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME---ARHNL 499
DG D I FLY++ G+ +S+G NVA LA IP V+ T + +E R NL
Sbjct: 1106 -DGQD-ITFLYEVGEGVAHRSYGLNVARLANIPSSVLDVAYTKSADLEEKIKRKNL 1159
>gi|675456|gb|AAA62406.1| Spellchecker1, partial [Drosophila melanogaster]
Length = 913
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 18/172 (10%)
Query: 373 RVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREE 431
R AT K V + RGT T +GC IA E + C T+FATH+H + +
Sbjct: 731 RTATDKSLV--IIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAETL 788
Query: 432 PNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAF 491
V +M+ + D D LY++ PG+ KSFG VA LA PE VV+ V
Sbjct: 789 STVKNCHMAAVADA-----DDFTLLYQVRPGVMEKSFGIQVARLANFPEHVVQNAQEVYN 843
Query: 492 QMEARHNLRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQTKKDLEDL 543
+ E H +Q K +K +E++Q A++ + + + ++EDL
Sbjct: 844 EFEDEHVDKQ----------KKEDKALLEKIQVAIQQLSTAGNNVDINVEDL 885
>gi|448452617|ref|ZP_21593441.1| DNA mismatch repair protein MutS [Halorubrum litoreum JCM 13561]
gi|445808524|gb|EMA58588.1| DNA mismatch repair protein MutS [Halorubrum litoreum JCM 13561]
Length = 978
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 53/96 (55%), Gaps = 8/96 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IAR E FL ++G T+FATHYH + E V + + R
Sbjct: 755 RGTATTDGRAIARAAAE-FLHDELGATTLFATHYHGLTDLADERERV---FNLHFTATRE 810
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
DG + FL+++VPG S+G VAELAG+P VV
Sbjct: 811 DG--DVTFLHRVVPGASSSSYGVEVAELAGVPGPVV 844
>gi|109077790|ref|XP_001110439.1| PREDICTED: DNA mismatch repair protein Msh3 [Macaca mulatta]
Length = 1124
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEY-MSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + + Y M ++ E
Sbjct: 967 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDE 1026
Query: 444 DKRNDGI----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
K + G D + FLY++ GI +S+G NVA+LA IP +++K + ++E N
Sbjct: 1027 SKLDPGEEQVPDFVTFLYQITRGIAARSYGLNVAKLADIPGEILKKAAHKSKELEGLINT 1086
Query: 500 RQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQT 536
++ + FA L + ++LQK E + E+QT
Sbjct: 1087 KRKRLKYFAKLWTMH---NAQDLQKWTEEFEMEETQT 1120
>gi|76156711|gb|AAX27861.2| SJCHGC07751 protein [Schistosoma japonicum]
Length = 171
Score = 69.7 bits (169), Expect = 4e-09, Method: Composition-based stats.
Identities = 45/127 (35%), Positives = 66/127 (51%), Gaps = 22/127 (17%)
Query: 390 RGTGTNDGCVIARVTL-------EKFLQI-GCLTVFATHYHSVARRLREEPNVAFE---- 437
RGT T+DG +A L ++F G T+F+THYHS+ + +F
Sbjct: 12 RGTSTHDGSSLAGAVLSYLARPNDRFRNCSGPRTLFSTHYHSLVDQFANIDQTSFNEDMD 71
Query: 438 -------YMSYI--EDKRNDG-IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGT 487
+M+ + E +DG ++ I FLYK +PG CPKS+GFN A LA +P+ V + G
Sbjct: 72 HSCIGLGHMACMVEEQLESDGDLENITFLYKFIPGACPKSYGFNAARLALLPDKVTRLGL 131
Query: 488 TVAFQME 494
T A + E
Sbjct: 132 TKAKEFE 138
>gi|255711001|ref|XP_002551784.1| KLTH0A07480p [Lachancea thermotolerans]
gi|238933161|emb|CAR21342.1| KLTH0A07480p [Lachancea thermotolerans CBS 6340]
Length = 1035
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/147 (35%), Positives = 77/147 (52%), Gaps = 14/147 (9%)
Query: 390 RGTGTNDGCVIARVTLEKF--LQIGC-LTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGTGT DG I+ ++ F ++ C +F THY + P + +MS+IE++R
Sbjct: 891 RGTGTTDGVSISYAIIKHFTSMETKCPFILFITHYPILGSI--TSPLLDNYHMSFIEERR 948
Query: 447 -NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA----FQMEARHNLRQ 501
+ T VFLYKL G+ S+G NVA LA IP D++ ++ F+ME +LR
Sbjct: 949 PGERWPTAVFLYKLTRGLASDSYGLNVARLANIPTDIINKAFEISEQAKFEMEGDKHLR- 1007
Query: 502 LFIHKF-ASLVKSGEKVDVEELQKALE 527
FI A+L+ G E+L + LE
Sbjct: 1008 -FISAVKAALLDKGSSYK-EKLLRLLE 1032
>gi|355750038|gb|EHH54376.1| hypothetical protein EGM_15199, partial [Macaca fascicularis]
Length = 1121
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 82/157 (52%), Gaps = 13/157 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEY-MSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + + Y M ++ E
Sbjct: 964 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDE 1023
Query: 444 DKRNDGI----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
K + G D + FLY++ GI +S+G NVA+LA IP +++K + ++E N
Sbjct: 1024 SKLDPGEEQVPDFVTFLYQITRGIAARSYGLNVAKLADIPGEILKKAAHKSKELEGLINT 1083
Query: 500 RQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQT 536
++ + FA L + ++LQK E + E+QT
Sbjct: 1084 KRKRLKYFAKLWTMH---NAQDLQKWTEEFEMEETQT 1117
>gi|421076048|ref|ZP_15537050.1| DNA mismatch repair protein mutS [Pelosinus fermentans JBW45]
gi|392525907|gb|EIW49031.1| DNA mismatch repair protein mutS [Pelosinus fermentans JBW45]
Length = 864
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 63/109 (57%), Gaps = 6/109 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IAR +E + + T+FATHYH + L + + Y ++++ +D
Sbjct: 699 RGTSTFDGMSIARAVIEYIKERVKAKTLFATHYHELTE-LADYHKIVKNYSVAVKERGSD 757
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARH 497
+VFL +++PG KS+G +VA+LAG+P+ V+K + ++E H
Sbjct: 758 ----VVFLRRIIPGGADKSYGIHVAQLAGLPQKVIKRAQELLVELEQNH 802
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 32/52 (61%)
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESG 256
K TP M Q+ IKS++ + +LFF++G FYE+F DA + + EL + G
Sbjct: 4 KYTPMMEQYLEIKSKHENEILFFRMGDFYEMFFTDAELASRELEITLTARDG 55
>gi|291543951|emb|CBL17060.1| DNA mismatch repair protein MutS [Ruminococcus champanellensis
18P13]
Length = 715
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 47/121 (38%), Positives = 64/121 (52%), Gaps = 20/121 (16%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ---IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG IAR E IGC T+FATHYH + +A E+ +E R
Sbjct: 557 RGTSTFDGVSIARAVAEYIANSRLIGCKTLFATHYHEL---------IALEH--SVEGVR 605
Query: 447 NDGI------DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR 500
N I D+I FL K+VPG S+G +VA+LAG+P VV + ++E++ +R
Sbjct: 606 NLSIAVKKHGDSIRFLRKIVPGGVDDSYGIDVAKLAGLPPRVVTRAKELLKELESQAPVR 665
Query: 501 Q 501
Q
Sbjct: 666 Q 666
>gi|452823052|gb|EME30066.1| DNA mismatch repair protein MutS isoform 2 [Galdieria sulphuraria]
Length = 1048
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/119 (34%), Positives = 56/119 (47%), Gaps = 22/119 (18%)
Query: 160 SGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQ 219
+G + WS + I D R P DY+P TLY+PPE ++ +P Q+W +K +
Sbjct: 104 TGEEKWSETNRW---ATDIRDEQHRLPTDVDYDPSTLYIPPEAFRQLSPFQKQFWELKRK 160
Query: 220 NF---------------DCVLFFKVGKFYELFHMDAVIGADELACSYMK----ESGCTG 259
++ D VLFFK GKFYEL+ DA IG L +Y E C G
Sbjct: 161 HYGTLQFFDSHKAQKTLDIVLFFKKGKFYELYDCDADIGHSVLGLNYTAGGRVEMRCVG 219
Score = 45.8 bits (107), Expect = 0.059, Method: Compositional matrix adjust.
Identities = 30/97 (30%), Positives = 48/97 (49%), Gaps = 7/97 (7%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA+ L +IGCL F+THYH++ FE + +++++ D
Sbjct: 924 RGTSTYDGYAIAKAVLNDISTRIGCLCFFSTHYHNLIHEKLPSNIRFFEMQAEVDEEKKD 983
Query: 449 GIDTIVFLYKL--VPGICPKSFGFNVAELAGIPEDVV 483
+ FLY L S G A++A +P +++
Sbjct: 984 ----VTFLYTLKQTSTSFVSSRGVYCAKMANLPGEIL 1016
>gi|374581420|ref|ZP_09654514.1| DNA mismatch repair protein MutS [Desulfosporosinus youngiae DSM
17734]
gi|374417502|gb|EHQ89937.1| DNA mismatch repair protein MutS [Desulfosporosinus youngiae DSM
17734]
Length = 850
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 39/109 (35%), Positives = 61/109 (55%), Gaps = 8/109 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ---IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG IA E +Q T+FATHYH + + E P + F ++++
Sbjct: 685 RGTATYDGLSIAWAVAEHLVQDPQFNPKTLFATHYHELTQLQDEFPGL-FNLHVGVKERG 743
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
D IVFL+K++PG +S+G VA LAG+P D+++ T+ ++E+
Sbjct: 744 ED----IVFLHKILPGRADRSYGIQVARLAGLPHDLIQRAKTLLLKLES 788
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 18/38 (47%), Positives = 26/38 (68%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGA 244
TP M Q+ +IK + D +LFF++G FYE+F DA + A
Sbjct: 3 TPMMQQYRSIKEKAPDAILFFRLGDFYEMFGEDAEVAA 40
>gi|7513626|pir||S72437 DNA mismatch repair protein FR-3 - mouse (fragments)
Length = 100
Score = 69.7 bits (169), Expect = 4e-09, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLF 226
D RR P HP++NP TLYVP EFL TP M +WW +KSQNFD V+F
Sbjct: 4 DEHRRRPDHPEFNPTTLYVPEEFLNSCTPGMRKWWQLKSQNFDLVIF 50
>gi|257386429|ref|YP_003176202.1| DNA mismatch repair protein MutS [Halomicrobium mukohataei DSM
12286]
gi|257168736|gb|ACV46495.1| DNA mismatch repair protein MutS [Halomicrobium mukohataei DSM
12286]
Length = 918
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 41/101 (40%), Positives = 55/101 (54%), Gaps = 6/101 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IAR E +IG T+FATH+H + E P V + + R+D
Sbjct: 719 RGTSTADGLAIARAVTEHVHDEIGAYTLFATHHHELTAVADELPGVRNRHF----ETRHD 774
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTV 489
G D +VF + + PG S+G VA LAG+P+ VV+ TV
Sbjct: 775 G-DGVVFEHSVAPGAAAASYGIEVAALAGVPDSVVERSRTV 814
>gi|340057247|emb|CCC51590.1| putative mismatch repair protein MSH8 [Trypanosoma vivax Y486]
Length = 1002
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 44/111 (39%), Positives = 58/111 (52%), Gaps = 17/111 (15%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ---IGCLTVFATHYHSVA-----------RRLREE--PN 433
RGT T+DG IA TL ++ + L +F+THYHS+A R +E
Sbjct: 852 RGTSTHDGYAIAHATLSSIIRHKPLPPLLLFSTHYHSLALEQAEQEGMKPRNFQEHDVKR 911
Query: 434 VAFEYMSYIEDK-RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
V YM + + I TI FLY+LVPGIC +S+G VA LAGI +V
Sbjct: 912 VQLGYMDFASSSTKEHCIPTITFLYRLVPGICTRSYGVEVALLAGIKPAIV 962
Score = 58.2 bits (139), Expect = 1e-05, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P + P T+ +P + L+ Q+W IKS+ +D ++FFK GKFYEL+ +DA IG E
Sbjct: 26 PMHRPSTITIPAKDLEAMAAMERQYWDIKSKYYDVMIFFKKGKFYELYDVDAAIGHREFG 85
Query: 249 CSYMKESGCTGESTL 263
+ + G+ L
Sbjct: 86 LKLVFDCTNRGKMRL 100
>gi|301761694|ref|XP_002916275.1| PREDICTED: DNA mismatch repair protein Msh3-like, partial [Ailuropoda
melanoleuca]
Length = 1123
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 51/166 (30%), Positives = 86/166 (51%), Gaps = 22/166 (13%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARR----LREEPNVAFEYMSYIED 444
RGT T+DG IA TLE F++ + LT+F THY V L++ N ++ ++
Sbjct: 967 RGTSTHDGIAIAYATLEHFIRDVKSLTLFVTHYPPVCELEKSYLQQVGNYHMGFLVNEDE 1026
Query: 445 KRND-----GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
+ D D + FLY++ GI +S+G NVA+LA +P +++ + + ++E N+
Sbjct: 1027 SKEDPGEEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILTKAASKSKELEGLVNM 1086
Query: 500 RQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQTKKDLEDLPG 545
++ + FA L D ++LQK E FE +E++PG
Sbjct: 1087 KRKRLKCFAKLWMIN---DAKDLQKWRE---EFE------MEEIPG 1120
>gi|294940586|ref|XP_002782821.1| DNA mismatch repair protein MSH6-1, putative [Perkinsus marinus
ATCC 50983]
gi|239894872|gb|EER14617.1| DNA mismatch repair protein MSH6-1, putative [Perkinsus marinus
ATCC 50983]
Length = 616
Score = 69.7 bits (169), Expect = 4e-09, Method: Compositional matrix adjust.
Identities = 38/96 (39%), Positives = 55/96 (57%), Gaps = 5/96 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA LE+ + IGC T+FATHYH +A E+ ++ + + N
Sbjct: 487 RGTSTFDGAAIAHAVLERISESIGCRTLFATHYHQLA----EDESLHNTALYHQACLVNP 542
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
+ FLYK G CP+S +VA++AG+PE +V+
Sbjct: 543 ATREVTFLYKFTKGRCPQSHAMHVAKIAGLPEVIVE 578
>gi|403256359|ref|XP_003920848.1| PREDICTED: DNA mismatch repair protein Msh3 [Saimiri boliviensis
boliviensis]
Length = 1123
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEY-MSYIEDKRN 447
RGT T+DG IA TLE F++ + LT+F THY V + + Y M ++ +
Sbjct: 966 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDE 1025
Query: 448 DGI--------DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
+ D + FLY++ GI +S+G NVA+LA +P +++K + ++E N
Sbjct: 1026 SRLPPGEEQVPDFVTFLYQITRGIAERSYGLNVAKLADVPGEILKKAAHKSKELEGLINT 1085
Query: 500 RQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQT 536
++ + FA L + ++LQK E ++ E+QT
Sbjct: 1086 KRKRLKYFAKLWTMS---NAQDLQKWTEELEMEETQT 1119
>gi|387592825|gb|EIJ87849.1| hypothetical protein NEQG_01921 [Nematocida parisii ERTm3]
Length = 907
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 172 FLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGK 231
FL P +D RSP Y+ TLY+ + L TPC Q+W IK + FD ++FFK GK
Sbjct: 102 FLSPP--VDKFGRSPGDIGYDKSTLYISDKELSAMTPCEEQFWRIKMEYFDTIVFFKKGK 159
Query: 232 FYELFHMDAVIGADELACSYMK 253
FYELF DAV+ ++ K
Sbjct: 160 FYELFAEDAVLSSELFGLKLTK 181
Score = 57.4 bits (137), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 31/94 (32%), Positives = 52/94 (55%), Gaps = 5/94 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T +G I+ E +I C T++ATH+ S E ++ + M+Y ++
Sbjct: 805 RGTSTKEGSAISMAVKEYLKKIKCTTLYATHFFSAIV----EGDITMK-MNYKHITNSEE 859
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
IV+LYKLV GIC S G ++ ++ +P++V+
Sbjct: 860 EQEIVYLYKLVDGICSDSCGIDICKMTKVPKEVI 893
>gi|354545376|emb|CCE42104.1| hypothetical protein CPAR2_806530 [Candida parapsilosis]
Length = 1009
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/143 (35%), Positives = 71/143 (49%), Gaps = 11/143 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYHSVARRLREEPNVAFEY-MSYIE-DK 445
RGTGT DG +A L+ F++ + L +F THY S+ E P Y M + E DK
Sbjct: 867 RGTGTTDGIALAYAILKYFIESELKPLLLFITHYPSIHILEHEYPGEVVNYHMGFEEVDK 926
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV----KFGTTVAFQMEARHNLRQ 501
+ ++FLY L G+ S+G NVA+LAGIPE V+ K + ++E +L
Sbjct: 927 GSGKFPEVIFLYNLCRGVVGNSYGLNVAKLAGIPEQVIANAYKVSEDLKHEIELDDDLEL 986
Query: 502 LFIHKFASLVKSGEKVDVEELQK 524
L K V G+ DV L K
Sbjct: 987 L---KSVQSVVKGDDADVSNLLK 1006
>gi|30089006|gb|AAP13535.1| mutS homolog 3 (E. coli) [Homo sapiens]
Length = 1140
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEY-MSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + + Y M ++ E
Sbjct: 982 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDE 1041
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K + G D + FLY++ GI +S+G NVA+LA +P +++K + ++E N
Sbjct: 1042 SKLDPGTAEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAAHKSKELEGLIN 1101
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQT 536
++ + FA L + ++LQK E E+QT
Sbjct: 1102 TKRKRLKYFAKLWTMH---NAQDLQKWTEEFNMEETQT 1136
>gi|120660058|gb|AAI30437.1| MutS homolog 3 (E. coli) [Homo sapiens]
Length = 1137
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEY-MSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + + Y M ++ E
Sbjct: 979 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDE 1038
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K + G D + FLY++ GI +S+G NVA+LA +P +++K + ++E N
Sbjct: 1039 SKLDPGTAEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAAHKSKELEGLIN 1098
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQT 536
++ + FA L + ++LQK E E+QT
Sbjct: 1099 TKRKRLKYFAKLWTMH---NAQDLQKWTEEFNMEETQT 1133
>gi|401882497|gb|EJT46755.1| DNA mismatch repair-related protein [Trichosporon asahii var.
asahii CBS 2479]
Length = 1161
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 43/70 (61%)
Query: 178 ILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFH 237
I D + P P+Y+P+T+Y+P + TP Q+W IK ++D VLFF+ GKFYEL+
Sbjct: 248 IKDKEGNRPGDPEYDPRTIYIPKKSWGSFTPFERQFWEIKQNHYDTVLFFQKGKFYELYE 307
Query: 238 MDAVIGADEL 247
DA IG E
Sbjct: 308 NDAAIGHQEF 317
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 37/96 (38%), Positives = 50/96 (52%), Gaps = 7/96 (7%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA L L FATHY S+ PN+ +M+ +++D
Sbjct: 1004 RGTSTYDGMAIAGAVLHHLSTHTLPLGFFATHYGSLTDDFAYHPNIRNMHMAVHVDDTAG 1063
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
+VFLYKL+ G S G +VA+LAG+P+ VV
Sbjct: 1064 -----VVFLYKLIKGHAESSHGTHVAKLAGVPDAVV 1094
>gi|395331444|gb|EJF63825.1| DNA mismatch repair protein [Dichomitus squalens LYAD-421 SS1]
Length = 964
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 53/148 (35%), Positives = 75/148 (50%), Gaps = 17/148 (11%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVA-FEYMSYIEDKRN 447
RGT T DG +A E QI +FATH+H + +E +V ++++ D
Sbjct: 777 RGTSTYDGFGLAWAISEHIASQIHAFCMFATHFHELTALDQEISHVKNLHVVAHVSDSEE 836
Query: 448 DGIDT-IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
G D I LYK+ PG+C +SFG +VAELA PE VVK A ++E F H+
Sbjct: 837 GGGDRDITLLYKVEPGVCDQSFGIHVAELANFPESVVKLARKKAEELED-------FNHE 889
Query: 507 F------ASLVKSGEKVDVEELQKALES 528
A +V+ G K+ VEE+ +A S
Sbjct: 890 KAEPELPADVVEEGTKI-VEEMLRAWTS 916
>gi|448521652|ref|XP_003868541.1| Msh3 protein [Candida orthopsilosis Co 90-125]
gi|380352881|emb|CCG25637.1| Msh3 protein [Candida orthopsilosis]
Length = 1011
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 62/116 (53%), Gaps = 7/116 (6%)
Query: 372 QRVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFLQIGC--LTVFATHYHSVARRLR 429
QR+ T+ + + + RGTGT DG +A L+ F++ L +F THY S+
Sbjct: 855 QRLTTRSLVILDEI---GRGTGTTDGIALAYAILKYFIESESKPLLLFITHYPSIHILEH 911
Query: 430 EEPNVAFEY-MSYIE-DKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
E P Y M + E +K N ++FLY L G+ S+G NVA+LAGIPE V+
Sbjct: 912 EYPGEVINYHMGFEEINKENGKFPEVIFLYDLCRGVVNNSYGLNVAKLAGIPEQVI 967
>gi|94986680|ref|YP_594613.1| DNA mismatch repair protein MutS [Lawsonia intracellularis
PHE/MN1-00]
gi|442555502|ref|YP_007365327.1| DNA mismatch repair protein MutS [Lawsonia intracellularis N343]
gi|166232123|sp|Q1MRT4.1|MUTS_LAWIP RecName: Full=DNA mismatch repair protein MutS
gi|94730929|emb|CAJ54292.1| Mismatch repair ATPase (MutS family) [Lawsonia intracellularis
PHE/MN1-00]
gi|441492949|gb|AGC49643.1| DNA mismatch repair protein MutS [Lawsonia intracellularis N343]
Length = 893
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 56/111 (50%), Gaps = 8/111 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL---QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG +A E + G T+FATHYH + EE M+
Sbjct: 721 RGTSTFDGLALAWAVAEDLVCKDHDGVRTLFATHYHELTAL--EEKLTGVHTMTIAIRHW 778
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARH 497
ND +VFLY+L+PG +S+G VA LAG+P+ V++ + Q+E H
Sbjct: 779 ND---ELVFLYRLIPGPADRSYGIEVARLAGVPQSVIQRAKIILTQLEQTH 826
Score = 42.7 bits (99), Expect = 0.50, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 29/46 (63%)
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+ TP + Q+ +IKS D +LF+++G FYELF DA A EL +
Sbjct: 7 RITPMLEQYLSIKSNYPDTLLFYRMGDFYELFFEDAETAARELQIA 52
>gi|321263883|ref|XP_003196659.1| DNA mismatch repair-related protein [Cryptococcus gattii WM276]
gi|317463136|gb|ADV24872.1| DNA mismatch repair-related protein, putative [Cryptococcus gattii
WM276]
Length = 1210
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGC-LTVFATHYHSVARRLREEPNVAFEYM-SYIEDKRN 447
RGT T DG IA L L FATHY S+ PN+ +M ++++D++
Sbjct: 1035 RGTSTYDGMAIAGAVLHHLATHSLPLGFFATHYGSLTDDFAYHPNIRRMHMQTHVDDEQK 1094
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
+VFLYKL+PG+ S G +VA +AG+P DVV +V+ Q + N
Sbjct: 1095 Q----VVFLYKLIPGVAESSHGTHVARMAGVPLDVVLRAESVSQQFFSAFN 1141
Score = 65.9 bits (159), Expect = 6e-08, Method: Compositional matrix adjust.
Identities = 29/71 (40%), Positives = 44/71 (61%)
Query: 177 HILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
+I D + P PDY+ +++ +P + + TP Q+W IK ++D VLFF+ GKFYEL+
Sbjct: 274 NIRDKEGNRPDDPDYDRRSILIPKKSWAEFTPFEKQFWEIKQNHYDTVLFFQKGKFYELY 333
Query: 237 HMDAVIGADEL 247
DA+IG E
Sbjct: 334 EDDALIGHQEF 344
>gi|181842|gb|AAB47281.1| MSH3 [Homo sapiens]
gi|49615092|dbj|BAD27111.1| hMSH3 protein [Homo sapiens]
Length = 1137
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEY-MSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + + Y M ++ E
Sbjct: 979 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDE 1038
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K + G D + FLY++ GI +S+G NVA+LA +P +++K + ++E N
Sbjct: 1039 SKLDPGTAEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAAHKSKELEGLIN 1098
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQT 536
++ + FA L + ++LQK E E+QT
Sbjct: 1099 TKRKRLKYFAKLWTMH---NAQDLQKWTEEFNMEETQT 1133
>gi|149200634|ref|ZP_01877637.1| DNA mismatch repair protein [Lentisphaera araneosa HTCC2155]
gi|149136283|gb|EDM24733.1| DNA mismatch repair protein [Lentisphaera araneosa HTCC2155]
Length = 837
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/105 (37%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG +A E GCLT+FATHYH + + P V ++ E K
Sbjct: 703 RGTSTYDGLSLAWAIAEHLHDAGCLTLFATHYHELTKLGASLPKVKNWCVAVHESK---- 758
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
I+FL+K+ G +S+G VA+LAGIP+ V+K + +E
Sbjct: 759 -GKIIFLHKIQAGAADRSYGIYVAKLAGIPKSVIKRADNILQDLE 802
>gi|125550271|gb|EAY96093.1| hypothetical protein OsI_17969 [Oryza sativa Indica Group]
Length = 237
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 17/122 (13%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLRE-EPNVAFEYMSYIEDKR- 446
RGT T+DG IA TL L + C+ +F THY + LRE E +V ++SY+ ++
Sbjct: 41 RGTSTHDGVAIAYATLHYLLKEKKCMVIFVTHYPKILNILREFEGSVGAYHVSYLATRKL 100
Query: 447 --------------NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQ 492
+ I FLYKLV G +SFG NVA LA +P ++ + +A +
Sbjct: 101 LEVADRQMVINNTETKDLGEITFLYKLVAGASDRSFGLNVALLAQLPSSCIERASVMAAK 160
Query: 493 ME 494
++
Sbjct: 161 LQ 162
>gi|397503403|ref|XP_003822314.1| PREDICTED: DNA mismatch repair protein Msh3 [Pan paniscus]
Length = 1131
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 49/158 (31%), Positives = 80/158 (50%), Gaps = 14/158 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEY-MSYIEDKRN 447
RGT T+DG IA TLE F++ + LT+F THY V + + Y M ++ +
Sbjct: 973 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDE 1032
Query: 448 DGID---------TIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
+D + FLY++ GI +S+G NVA+LA +P +++K + ++E N
Sbjct: 1033 SKLDPDAAEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAAHKSKELEGLIN 1092
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQT 536
++ + FA L + ++LQK E K E+QT
Sbjct: 1093 TKRKRLKYFAKLWTMH---NAQDLQKWTEEFKMEETQT 1127
>gi|395324921|gb|EJF57352.1| DNA mismatch repair protein Msh6 [Dichomitus squalens LYAD-421 SS1]
Length = 1291
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 33/82 (40%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 166 SHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVL 225
+ + + FL + D D P P Y+P+TLY+P + TP Q+W IK +FD +L
Sbjct: 326 AEDAFSFLL--DVRDKDGVRPGEPGYDPRTLYIPKSAWNEFTPFEKQFWEIKQNHFDTIL 383
Query: 226 FFKVGKFYELFHMDAVIGADEL 247
FF+ GKF EL+ DA IG E
Sbjct: 384 FFQKGKFLELYEEDARIGHQEF 405
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 57/103 (55%), Gaps = 6/103 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYM-SYIEDKRN 447
RGT T DG IA L + L+ FATHY S+ PNV +M + ++D++
Sbjct: 1121 RGTSTYDGMAIAGAVLHQLATHTLSLSFFATHYGSLTDDYAYHPNVRNMHMETLVDDEKR 1180
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
+ +VFLYKLV G SFG +VA LAG+P +VV+ V+
Sbjct: 1181 E----LVFLYKLVDGAAGSSFGTHVANLAGVPLEVVERAEVVS 1219
Score = 53.5 bits (127), Expect = 3e-04, Method: Compositional matrix adjust.
Identities = 37/127 (29%), Positives = 66/127 (51%), Gaps = 6/127 (4%)
Query: 270 YESQTPSGCF---PDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEK 326
+ES+T SG PD++ LK+ ++ F E +S ++P+ G+D+ YD VM EI +E
Sbjct: 802 FESKTISGLLRTAPDLAPNLKHVKSMFQTPEENS-DELVPEDGMDEVYDTVMSEINELED 860
Query: 327 EIQTYLRTQCAHFGCTVIY-SEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYV 385
E++ L+T G Y AQ ++ Y++++ K KA ++ KN + ++
Sbjct: 861 ELKAELKTIRKKTGLDATYWHSAQGTKEIYLVQLQGKEKDKA-PKEWTLSGSTKNAKRFI 919
Query: 386 TPECRGT 392
P + T
Sbjct: 920 IPSLQTT 926
>gi|254432191|ref|ZP_05045894.1| DNA mismatch repair protein MutS [Cyanobium sp. PCC 7001]
gi|197626644|gb|EDY39203.1| DNA mismatch repair protein MutS [Cyanobium sp. PCC 7001]
Length = 1006
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 42/112 (37%), Positives = 60/112 (53%), Gaps = 6/112 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA E+ Q IG ++FATHYH + PNVA + +E+ +D
Sbjct: 812 RGTATFDGLSIAWAVAEELAQGIGARSIFATHYHELNELAELLPNVANAQV-LVEETGSD 870
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR 500
+ FL+++VPG +S+G A LAGIP V+ V ++EA +R
Sbjct: 871 ----LRFLHRVVPGGASRSYGIEAARLAGIPASVLLRARQVLSRIEANSQVR 918
>gi|320166046|gb|EFW42945.1| DNA mismatch repair protein Msh3 [Capsaspora owczarzaki ATCC 30864]
Length = 1139
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 39/120 (32%), Positives = 65/120 (54%), Gaps = 15/120 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEP-NVAFEYMSYIED--- 444
RGT T DG IA TL+ + + LT+F THY ++ P +V+ +M+++++
Sbjct: 1006 RGTSTFDGLAIAHATLDYLIAESKPLTLFVTHYPALGEFASTYPRHVSNHHMAFVDNGHT 1065
Query: 445 ----------KRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+D I +I FLY+L G+ +S+G NVA LAG+P DV+ + + ++E
Sbjct: 1066 DEEPEDANPPSESDDIQSIAFLYQLANGVAHRSYGLNVARLAGLPHDVLALASRKSAELE 1125
>gi|58260898|ref|XP_567859.1| mismatch repair-related protein [Cryptococcus neoformans var.
neoformans JEC21]
gi|57229940|gb|AAW46342.1| mismatch repair-related protein, putative [Cryptococcus neoformans
var. neoformans JEC21]
Length = 1205
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGC-LTVFATHYHSVARRLREEPNVAFEYM-SYIEDKRN 447
RGT T DG IA L L FATHY S+ PN+ +M ++++D++
Sbjct: 1030 RGTSTYDGMAIAGAVLHHIATHSLPLGFFATHYGSLTDDFAYHPNIRRMHMQTHVDDEQK 1089
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
+VFLYKL+PG+ S G +VA +AG+P DVV +V+ Q + N
Sbjct: 1090 Q----VVFLYKLIPGVAESSHGTHVARMAGVPLDVVLRAESVSQQFFSAFN 1136
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 35 SEDDSPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPP---KAEVESESEHSS 91
S+DDS +P+ + +R + +++ DSE + M + +A S S+ S
Sbjct: 142 SDDDSEGEVKPKASNGRRPRKSLKEDSEDEYMFDEADDAAMAAALDDFEANKLSPSKSPS 201
Query: 92 GEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSD 151
++ ++ P+ SS + TP++ G PK A + SF +
Sbjct: 202 PPRKITKAKATPSASSKKPTTTPIRPG---------------PKPVANKGSESNSFLTAA 246
Query: 152 TSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMG 211
+ + ++ S + FL +I D + P PDY+ +++ +P + + TP
Sbjct: 247 ERKKIQAKEDKRE-SEQCFDFLV--NIRDKEGNRPDDPDYDKRSILIPKKSWAEFTPFEK 303
Query: 212 QWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL 247
Q+W IK ++D VLFF+ GKFYEL+ DA+IG E
Sbjct: 304 QFWEIKQNHYDTVLFFQKGKFYELYEDDALIGHQEF 339
>gi|284813531|ref|NP_002430.3| DNA mismatch repair protein Msh3 [Homo sapiens]
gi|317373576|sp|P20585.4|MSH3_HUMAN RecName: Full=DNA mismatch repair protein Msh3; Short=hMSH3; AltName:
Full=Divergent upstream protein; Short=DUP; AltName:
Full=Mismatch repair protein 1; Short=MRP1
Length = 1137
Score = 69.3 bits (168), Expect = 5e-09, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEY-MSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + + Y M ++ E
Sbjct: 979 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDE 1038
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K + G D + FLY++ GI +S+G NVA+LA +P +++K + ++E N
Sbjct: 1039 SKLDPGAAEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAAHKSKELEGLIN 1098
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQT 536
++ + FA L + ++LQK E E+QT
Sbjct: 1099 TKRKRLKYFAKLWTMH---NAQDLQKWTEEFNMEETQT 1133
>gi|367009658|ref|XP_003679330.1| hypothetical protein TDEL_0A07870 [Torulaspora delbrueckii]
gi|359746987|emb|CCE90119.1| hypothetical protein TDEL_0A07870 [Torulaspora delbrueckii]
Length = 995
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 57/97 (58%), Gaps = 5/97 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGC-LTVFATHYHSVARRLREEPNVAFEYMSYIEDKR- 446
RGTGT DG IA LE FL + C L +F THY + + E P + +M Y+E++R
Sbjct: 844 RGTGTEDGKAIASTLLEYFLTEKECPLILFTTHYTMLG--MIESPILRNYFMDYVEERRE 901
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
+ ++V LYKL PG+ S+G NVA LA I + ++
Sbjct: 902 GENWPSVVLLYKLKPGMTSNSYGLNVARLAHIDKAII 938
>gi|325110084|ref|YP_004271152.1| DNA mismatch repair protein MutS [Planctomyces brasiliensis DSM
5305]
gi|324970352|gb|ADY61130.1| DNA mismatch repair protein MutS [Planctomyces brasiliensis DSM
5305]
Length = 925
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 39/110 (35%), Positives = 61/110 (55%), Gaps = 8/110 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG +A E +L IG T+FATHYH + L + + + + +K
Sbjct: 762 RGTSTYDGLSLAWAVTE-YLHDTIGARTLFATHYHELTE-LEQTLSAVRNWNVSVYEKDG 819
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARH 497
D ++FL+K+VPG +S+G +VA LAG+P DV++ + +E+ H
Sbjct: 820 D----VIFLHKIVPGAADRSYGIHVARLAGVPTDVLRRAGEILSTLESDH 865
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 21/47 (44%), Positives = 31/47 (65%)
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSY 251
K TP M +++ +K Q+ D +L F++G FYELF+ DAVI A L +
Sbjct: 50 KLTPMMERFFEVKRQHPDSLLLFRMGDFYELFYDDAVIAAKILGLTL 96
>gi|120660370|gb|AAI30435.1| MutS homolog 3 (E. coli) [Homo sapiens]
Length = 1137
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEY-MSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + + Y M ++ E
Sbjct: 979 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDE 1038
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K + G D + FLY++ GI +S+G NVA+LA +P +++K + ++E N
Sbjct: 1039 SKLDPGTAEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAAHKSKELEGLIN 1098
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQT 536
++ + FA L + ++LQK E E+QT
Sbjct: 1099 TKRKRLKYFAKLWTMH---NAQDLQKWTEEFNMEETQT 1133
>gi|387595446|gb|EIJ93070.1| hypothetical protein NEPG_02026 [Nematocida parisii ERTm1]
Length = 605
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/82 (42%), Positives = 46/82 (56%), Gaps = 2/82 (2%)
Query: 172 FLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGK 231
FL P +D RSP Y+ TLY+ + L TPC Q+W IK + FD ++FFK GK
Sbjct: 102 FLSPP--VDKFGRSPGDIGYDKSTLYISDKELSAMTPCEEQFWRIKMEYFDTIVFFKKGK 159
Query: 232 FYELFHMDAVIGADELACSYMK 253
FYELF DAV+ ++ K
Sbjct: 160 FYELFAEDAVLSSELFGLKLTK 181
>gi|158260735|dbj|BAF82545.1| unnamed protein product [Homo sapiens]
Length = 1128
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEY-MSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + + Y M ++ E
Sbjct: 970 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDE 1029
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K + G D + FLY++ GI +S+G NVA+LA +P +++K + ++E N
Sbjct: 1030 SKLDPGTAEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAAHKSKELEGLIN 1089
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQT 536
++ + FA L + ++LQK E E+QT
Sbjct: 1090 TKRKRLKYFAKLWTMH---NAQDLQKWTEEFNMEETQT 1124
>gi|134116991|ref|XP_772722.1| hypothetical protein CNBK0960 [Cryptococcus neoformans var.
neoformans B-3501A]
gi|50255340|gb|EAL18075.1| hypothetical protein CNBK0960 [Cryptococcus neoformans var.
neoformans B-3501A]
Length = 1205
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 59/111 (53%), Gaps = 6/111 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGC-LTVFATHYHSVARRLREEPNVAFEYM-SYIEDKRN 447
RGT T DG IA L L FATHY S+ PN+ +M ++++D++
Sbjct: 1030 RGTSTYDGMAIAGAVLHHIATHSLPLGFFATHYGSLTDDFAYHPNIRRMHMQTHVDDEQK 1089
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
+VFLYKL+PG+ S G +VA +AG+P DVV +V+ Q + N
Sbjct: 1090 Q----VVFLYKLIPGVAESSHGTHVARMAGVPLDVVLRAESVSQQFFSAFN 1136
Score = 66.2 bits (160), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 57/216 (26%), Positives = 100/216 (46%), Gaps = 21/216 (9%)
Query: 35 SEDDSPVTKRPRRKSAKRVKSAIQSDSEPDDMLQDNGSEDEYVPP---KAEVESESEHSS 91
S+DDS +P+ + +R + +++ DSE + M + +A S S+ S
Sbjct: 142 SDDDSEGEVKPKASNGRRPRKSLKEDSEDEYMFDEADDAAMAAALDDFEANKLSPSKSPS 201
Query: 92 GEEELEESVEDPTPSSSEAEVTPMKNGNKRGLSSKSGQPTKKPKLTAPSTPSTPSFPVSD 151
++ ++ P+ SS + TP++ G PK A + SF +
Sbjct: 202 PPRKITKAKATPSASSKKPTTTPIRPG---------------PKPIANKGSESSSFLTAA 246
Query: 152 TSETTPSTSGAQDWSHNHYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMG 211
+ + ++ S + FL +I D + P PDY+ +++ +P + + TP
Sbjct: 247 ERKKIQAKEDKRE-SEQCFDFLV--NIRDKEGNRPDDPDYDKRSILIPKKSWAEFTPFEK 303
Query: 212 QWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL 247
Q+W IK ++D VLFF+ GKFYEL+ DA+IG E
Sbjct: 304 QFWEIKQNHYDTVLFFQKGKFYELYEDDALIGHQEF 339
>gi|169350633|ref|ZP_02867571.1| hypothetical protein CLOSPI_01405 [Clostridium spiroforme DSM 1552]
gi|169292687|gb|EDS74820.1| DNA mismatch repair protein MutS [Clostridium spiroforme DSM 1552]
Length = 837
Score = 69.3 bits (168), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 47/141 (33%), Positives = 74/141 (52%), Gaps = 10/141 (7%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA+ +E I C+T+F+THYH + EE N+ + + ND
Sbjct: 682 RGTATFDGMAIAQSMIEYIATSIKCITLFSTHYHELT--FLEEKNLGIKNVHASASIEND 739
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
+ VFLY++ PG KS+G NVA+LA +P+ ++ T+ +E +N+ H +
Sbjct: 740 NL---VFLYRIKPGRSNKSYGINVAKLAKLPDAILNRANTLLKSLE-ENNIEH---HLSS 792
Query: 509 SLVKSGEKVDVEELQKALESV 529
VK V E++K L+ +
Sbjct: 793 DKVKEAPIVTRSEVEKYLDKI 813
Score = 47.0 bits (110), Expect = 0.030, Method: Compositional matrix adjust.
Identities = 22/62 (35%), Positives = 37/62 (59%), Gaps = 6/62 (9%)
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGESTLL 264
K +P M Q+ +IK +N D ++ F++G FYE+F DA++ + EL E TG++ +
Sbjct: 4 KYSPMMMQYLSIKEENQDSIVMFRLGDFYEMFFDDAILVSKEL------EIALTGKNAGV 57
Query: 265 TQ 266
Q
Sbjct: 58 AQ 59
>gi|58040303|ref|YP_192267.1| DNA mismatch repair protein MutS [Gluconobacter oxydans 621H]
gi|58002717|gb|AAW61611.1| DNA mismatch repair protein MutS [Gluconobacter oxydans 621H]
Length = 883
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 60/106 (56%), Gaps = 6/106 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA TLE Q+G T+FATH+H + P +A Y +++ R +
Sbjct: 714 RGTATLDGLSIAWATLEALHTQLGSRTIFATHFHELGALTEFLPRLA-PYTMAVKEWRGE 772
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++F +++ PG KS+G +VA+LAGIP+ VV + + Q E
Sbjct: 773 ----VIFQHEVRPGAARKSWGLHVAKLAGIPQSVVNRASRLLTQFE 814
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 29/54 (53%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGE 260
+P M QW+ +K Q D +LFF++G FYELF DA A L + GE
Sbjct: 10 SPAMAQWFDLKHQEPDALLFFRMGDFYELFFSDAQAAAMALDIALTARGTHQGE 63
>gi|383861845|ref|XP_003706395.1| PREDICTED: DNA mismatch repair protein Msh2-like [Megachile
rotundata]
Length = 920
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/99 (35%), Positives = 61/99 (61%), Gaps = 8/99 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T +GC IA ++ ++L +I C +FATH+H + + E V ++++ + D
Sbjct: 748 RGTSTYEGCGIAW-SIAEYLAKEIKCYCLFATHFHEITKLEEEVSAVKNQHVTALVDD-- 804
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
+ + LYK+ PGIC +SFG +VA++A P++V++F
Sbjct: 805 ---NKLTLLYKVKPGICDQSFGIHVAKMANFPQNVIEFA 840
>gi|15639319|ref|NP_218768.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189025561|ref|YP_001933333.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pallidum SS14]
gi|378972827|ref|YP_005221431.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pertenue str. SamoaD]
gi|378973894|ref|YP_005222500.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pertenue str. Gauthier]
gi|378974956|ref|YP_005223564.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pallidum DAL-1]
gi|378981803|ref|YP_005230108.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pertenue str. CDC2]
gi|384421853|ref|YP_005631212.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pallidum str. Chicago]
gi|408502210|ref|YP_006869654.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pallidum str. Mexico A]
gi|6093453|sp|O83348.1|MUTS_TREPA RecName: Full=DNA mismatch repair protein MutS
gi|238689318|sp|B2S2S5.1|MUTS_TREPS RecName: Full=DNA mismatch repair protein MutS
gi|3322604|gb|AAC65315.1| DNA mismatch repair protein (mutS) [Treponema pallidum subsp.
pallidum str. Nichols]
gi|189018136|gb|ACD70754.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pallidum SS14]
gi|291059719|gb|ADD72454.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pallidum str. Chicago]
gi|374677150|gb|AEZ57443.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pertenue str. SamoaD]
gi|374678220|gb|AEZ58512.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pertenue str. CDC2]
gi|374679289|gb|AEZ59580.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pertenue str. Gauthier]
gi|374680354|gb|AEZ60644.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pallidum DAL-1]
gi|408475573|gb|AFU66338.1| DNA mismatch repair protein MutS [Treponema pallidum subsp.
pallidum str. Mexico A]
Length = 900
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 57/108 (52%), Gaps = 8/108 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA+ E L + T+FATHYH ++R P + + +E
Sbjct: 709 RGTATEDGLSIAQAVSEYLLHHVRAKTLFATHYHELSRL--AHPQLEHLKLDVLETD--- 763
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
+TIVFL K+ PG C S+G VA LAG+PE V+ + Q++ R
Sbjct: 764 --NTIVFLKKVTPGSCGSSYGIYVARLAGLPESVLARACELLKQLQQR 809
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESG 256
L TP M Q+ I++Q+ D VLFF++G FYE+F DA+ + L + K +G
Sbjct: 4 LASDTPLMRQYHAIRAQHPDAVLFFRLGDFYEMFDSDALHVSTLLGLTLTKRNG 57
>gi|258509230|ref|YP_003171981.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus GG]
gi|257149157|emb|CAR88130.1| DNA mismatch repair protein mutS [Lactobacillus rhamnosus GG]
Length = 857
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 12/110 (10%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYH---SVARRLREEPNVAFEYMSYIEDK 445
RGT T DG +A+ +E + T+F+THYH S++ L + NV ++ +E+
Sbjct: 691 RGTATYDGMALAQAIIEYLHDHVHAKTLFSTHYHELTSLSDSLAKLKNV---HVGAVEEH 747
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
N +VFL+K++PG KS+G +VA+LAG+P D++ T+ Q+EA
Sbjct: 748 GN-----LVFLHKMMPGPADKSYGIHVAKLAGLPADLLSRADTILKQLEA 792
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
TP M Q+ IK+Q D LF+++G FYELF+ DA+ GA L +
Sbjct: 8 TPMMQQYNAIKAQYPDAFLFYRIGDFYELFNDDAIKGAQLLELT 51
>gi|390459821|ref|XP_002744847.2| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh3
[Callithrix jacchus]
Length = 1126
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/157 (30%), Positives = 81/157 (51%), Gaps = 13/157 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEY-MSYIEDKRN 447
RGT T+DG IA TLE F++ + LT+F THY V + + Y M ++ +
Sbjct: 969 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDE 1028
Query: 448 DGI--------DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
+ D + FLY++ GI +S+G NVA+LA +P +++K + ++E N
Sbjct: 1029 SRLPPGEEQVPDFVTFLYQITRGIAERSYGLNVAKLADVPGEILKKAAHKSKELEGLINT 1088
Query: 500 RQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQT 536
++ + FA L + ++LQK E ++ E+QT
Sbjct: 1089 KRKRLKYFAKLWTMH---NAQDLQKWTEELEMEETQT 1122
>gi|332224846|ref|XP_003261579.1| PREDICTED: LOW QUALITY PROTEIN: DNA mismatch repair protein Msh3
[Nomascus leucogenys]
Length = 1125
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 83/158 (52%), Gaps = 14/158 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPN-VAFEYMSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + + V +M ++ E
Sbjct: 967 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDE 1026
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K + G D + FLY++ GI +S+G NVA+LA +P +++K + ++E N
Sbjct: 1027 SKLDPGAEEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAAHKSKELEGLIN 1086
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQT 536
++ + FA L + ++LQK E + E+QT
Sbjct: 1087 TKRKRLKYFAELWTMH---NAQDLQKWTEEFEMEETQT 1121
>gi|68483133|ref|XP_714501.1| hypothetical protein CaO19.11091 [Candida albicans SC5314]
gi|68483234|ref|XP_714452.1| hypothetical protein CaO19.3608 [Candida albicans SC5314]
gi|74656248|sp|Q59Y41.1|MSH3_CANAL RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|46436018|gb|EAK95388.1| hypothetical protein CaO19.3608 [Candida albicans SC5314]
gi|46436074|gb|EAK95443.1| hypothetical protein CaO19.11091 [Candida albicans SC5314]
Length = 1037
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 8/133 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYHSVARRLREEPN--VAFEYMSYIEDK 445
RGTGT DG +A L+ ++ L +F THY S+ +E PN V +M Y E K
Sbjct: 883 RGTGTIDGISLAYSILKYLIESEFKPLVLFITHYPSIHVLEQEYPNQLVVNYHMGYQEIK 942
Query: 446 RND--GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL- 502
N I I+FLY L G+ S+G NVA+LAGI D++K V+ ++++ L++
Sbjct: 943 NNTPGEIPEIIFLYNLCRGVVNNSYGLNVAKLAGISHDIIKQAYRVSEKVKSDIELKEYW 1002
Query: 503 -FIHKFASLVKSG 514
F H +K G
Sbjct: 1003 KFAHSLNKALKEG 1015
>gi|1490521|gb|AAB06045.1| hMSH3 [Homo sapiens]
gi|119616268|gb|EAW95862.1| mutS homolog 3 (E. coli), isoform CRA_b [Homo sapiens]
Length = 1128
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 81/158 (51%), Gaps = 14/158 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEY-MSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + + Y M ++ E
Sbjct: 970 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDE 1029
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K + G D + FLY++ GI +S+G NVA+LA +P +++K + ++E N
Sbjct: 1030 SKLDPGAAEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAAHKSKELEGLIN 1089
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQT 536
++ + FA L + ++LQK E E+QT
Sbjct: 1090 TKRKRLKYFAKLWTMH---NAQDLQKWTEEFNMEETQT 1124
>gi|400286455|ref|ZP_10788487.1| DNA mismatch repair protein MutS [Psychrobacter sp. PAMC 21119]
Length = 1037
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 35/96 (36%), Positives = 55/96 (57%), Gaps = 3/96 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLRE-EPNVAFEYMSYIEDKRND 448
RGT T DG IA + + ++IGCLT+FATHY + + ++ E N A ++ D
Sbjct: 839 RGTATTDGLAIAHACVNRLVEIGCLTLFATHYFELTQLSKDGEANHANIRNVHVAASEVD 898
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
G ++ L+++ G SFG +VA++AGIP V+
Sbjct: 899 G--QLLLLHQIREGAASSSFGLHVAKMAGIPIQVLN 932
>gi|168334525|ref|ZP_02692686.1| DNA mismatch repair protein MutS [Epulopiscium sp. 'N.t. morphotype
B']
Length = 846
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 63/108 (58%), Gaps = 7/108 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IA+ +E ++G T+F+THYH + + + + N+ Y ++ +N
Sbjct: 686 RGTSTLDGLSIAQAVIEYIAINKVGAKTLFSTHYHELPQLVNQYANIK-NYCVTVQQNKN 744
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
+++FL+K+ G+ KSFG VA+LAG+P DV+ + +++A
Sbjct: 745 ----SLIFLHKIAEGVAGKSFGLEVAKLAGLPVDVLHRAGQILSKLDA 788
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/51 (43%), Positives = 33/51 (64%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESG 256
TP + Q++ IK + DC+LFF++G FYE+F DAV + EL + K +G
Sbjct: 1 MTPMLKQYFEIKKKYSDCLLFFRLGDFYEMFFDDAVFASQELELTLTKRNG 51
>gi|392562297|gb|EIW55477.1| DNA mismatch repair protein [Trametes versicolor FP-101664 SS1]
Length = 967
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVA-FEYMSYIEDKRN 447
RGT T DG +A E QI +FATH+H + +E +V ++++ D
Sbjct: 778 RGTSTYDGFGLAWAISEHIASQIHAFCMFATHFHELTALDQEIKHVKNLHVVAHVSDADA 837
Query: 448 DGIDT-IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+G D I LYK+ PG+C +SFG +VAELA PE VVK A ++E
Sbjct: 838 EGRDRDITLLYKVEPGVCDQSFGIHVAELANFPESVVKLARRKADELE 885
>gi|333997850|ref|YP_004530462.1| DNA mismatch repair protein MutS [Treponema primitia ZAS-2]
gi|333739864|gb|AEF85354.1| DNA mismatch repair protein MutS [Treponema primitia ZAS-2]
Length = 906
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 43/96 (44%), Positives = 57/96 (59%), Gaps = 8/96 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGTGT DG IA E+ L +I C T+FATHYH +A L P++A M + N
Sbjct: 689 RGTGTYDGLSIAWAVCEELLDRIKCRTLFATHYHELA--LLSHPHLANRSMEVL----NQ 742
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
G IVFL KL G +S+G +VA LAG+ E+V++
Sbjct: 743 G-GEIVFLRKLKEGPAAESYGLHVARLAGLSEEVLR 777
>gi|199597365|ref|ZP_03210795.1| Mismatch repair ATPase (MutS family) protein [Lactobacillus
rhamnosus HN001]
gi|258540414|ref|YP_003174913.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus Lc 705]
gi|385836052|ref|YP_005873827.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus ATCC
8530]
gi|418072689|ref|ZP_12709959.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus R0011]
gi|199591625|gb|EDY99701.1| Mismatch repair ATPase (MutS family) protein [Lactobacillus
rhamnosus HN001]
gi|257152090|emb|CAR91062.1| DNA mismatch repair protein mutS [Lactobacillus rhamnosus Lc 705]
gi|355395544|gb|AER64974.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus ATCC
8530]
gi|357537086|gb|EHJ21113.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus R0011]
Length = 857
Score = 68.9 bits (167), Expect = 6e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 12/110 (10%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYH---SVARRLREEPNVAFEYMSYIEDK 445
RGT T DG +A+ +E + T+F+THYH S++ L + NV ++ +E+
Sbjct: 691 RGTATYDGMALAQAIIEYLHDHVHAKTLFSTHYHELTSLSDSLAKLKNV---HVGAVEEH 747
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
N +VFL+K++PG KS+G +VA+LAG+P D++ T+ Q+EA
Sbjct: 748 GN-----LVFLHKMMPGPADKSYGIHVAKLAGLPADLLSRADTILKQLEA 792
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
TP M Q+ IK+Q D LF+++G FYELF+ DA+ GA L +
Sbjct: 8 TPMMQQYNAIKAQYPDAFLFYRIGDFYELFNDDAIKGAQLLELT 51
>gi|421768634|ref|ZP_16205345.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus LRHMDP2]
gi|421772450|ref|ZP_16209105.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus LRHMDP3]
gi|411183650|gb|EKS50786.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus LRHMDP3]
gi|411186307|gb|EKS53432.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus LRHMDP2]
Length = 860
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 12/110 (10%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYH---SVARRLREEPNVAFEYMSYIEDK 445
RGT T DG +A+ +E + T+F+THYH S++ L + NV ++ +E+
Sbjct: 694 RGTATYDGMALAQAIIEYLHDHVHAKTLFSTHYHELTSLSDSLAKLKNV---HVGAVEEH 750
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
N +VFL+K++PG KS+G +VA+LAG+P D++ T+ Q+EA
Sbjct: 751 GN-----LVFLHKMMPGPADKSYGIHVAKLAGLPADLLSRADTILKQLEA 795
Score = 49.3 bits (116), Expect = 0.006, Method: Compositional matrix adjust.
Identities = 22/44 (50%), Positives = 29/44 (65%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
TP M Q+ IK+Q D LF+++G FYELF+ DAV GA L +
Sbjct: 11 TPMMQQYNAIKAQYPDAFLFYRIGDFYELFNDDAVKGAQLLELT 54
>gi|303257833|ref|ZP_07343843.1| DNA mismatch repair protein MutS [Burkholderiales bacterium 1_1_47]
gi|330998745|ref|ZP_08322473.1| DNA mismatch repair protein MutS [Parasutterella excrementihominis
YIT 11859]
gi|302859436|gb|EFL82517.1| DNA mismatch repair protein MutS [Burkholderiales bacterium 1_1_47]
gi|329576242|gb|EGG57758.1| DNA mismatch repair protein MutS [Parasutterella excrementihominis
YIT 11859]
Length = 881
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/109 (36%), Positives = 61/109 (55%), Gaps = 8/109 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGC--LTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG +A E L + C LT+FATHY + + + P+V +++ E +N
Sbjct: 710 RGTSTFDGLSLAAAIAED-LVVNCRSLTLFATHYFELTQLEKTLPDVVNVHVAAAESSKN 768
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
IVFL+++ PG +S+G VA+LAGIP V++ V ++E R
Sbjct: 769 -----IVFLHEIRPGAANQSYGIAVAKLAGIPRSVIRGAQKVLLKLEER 812
>gi|444315884|ref|XP_004178599.1| hypothetical protein TBLA_0B02380 [Tetrapisispora blattae CBS 6284]
gi|387511639|emb|CCH59080.1| hypothetical protein TBLA_0B02380 [Tetrapisispora blattae CBS 6284]
Length = 959
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 38/101 (37%), Positives = 55/101 (54%), Gaps = 4/101 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVA-FEYMSYIE--DK 445
RGT T DG +A E +IGC +FATH+H + PNV +++IE D+
Sbjct: 768 RGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTSLADNLPNVKNMHVVAHIEQGDE 827
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
+ D I LYK+ PGI +SFG +VAE+ P+ ++K
Sbjct: 828 SHSNSDDITLLYKVEPGISDQSFGIHVAEVVNFPQKIIKMA 868
>gi|207341422|gb|EDZ69483.1| YOL090Wp-like protein [Saccharomyces cerevisiae AWRI1631]
Length = 872
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/103 (39%), Positives = 59/103 (57%), Gaps = 7/103 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVA-FEYMSYIE---- 443
RGT T DG +A E +IGC +FATH+H + + PNV +++IE
Sbjct: 771 RGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELSEKLPNVKNMHVVAHIEKNLK 830
Query: 444 DKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
++++D D I LYK+ PGI +SFG +VAE+ PE +VK G
Sbjct: 831 EQKHDDED-ITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMG 872
>gi|162451401|ref|YP_001613768.1| DNA mismatch repair protein [Sorangium cellulosum So ce56]
gi|189083194|sp|A9GIM9.1|MUTS_SORC5 RecName: Full=DNA mismatch repair protein MutS
gi|161161983|emb|CAN93288.1| DNA mismatch repair protein [Sorangium cellulosum So ce56]
Length = 918
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/106 (38%), Positives = 54/106 (50%), Gaps = 6/106 (5%)
Query: 390 RGTGTNDGCVIARVTLEK-FLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA E F IGC +FATHYH + P +A +Y R
Sbjct: 745 RGTSTYDGLAIAWAVAEHLFDAIGCRALFATHYHELTELSARAPGIA----NYSVAAREH 800
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
G D ++FL+KL G +S+G VA LAG+PE V+ + +E
Sbjct: 801 G-DDVIFLHKLEAGPASRSYGVAVARLAGVPEGVLARARAILATLE 845
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/43 (46%), Positives = 29/43 (67%)
Query: 200 PEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVI 242
P KK TP M Q+ K+ + D +LFF++G FYE+F+ DAV+
Sbjct: 7 PAARKKLTPVMRQYEDAKALHPDAILFFRMGDFYEMFNDDAVL 49
>gi|229552974|ref|ZP_04441699.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus LMS2-1]
gi|423080063|ref|ZP_17068731.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus ATCC
21052]
gi|229313663|gb|EEN79636.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus LMS2-1]
gi|357544583|gb|EHJ26586.1| DNA mismatch repair protein MutS [Lactobacillus rhamnosus ATCC
21052]
Length = 848
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 12/110 (10%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYH---SVARRLREEPNVAFEYMSYIEDK 445
RGT T DG +A+ +E + T+F+THYH S++ L + NV ++ +E+
Sbjct: 682 RGTATYDGMALAQAIIEYLHDHVHAKTLFSTHYHELTSLSDSLAKLKNV---HVGAVEEH 738
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
N +VFL+K++PG KS+G +VA+LAG+P D++ T+ Q+EA
Sbjct: 739 GN-----LVFLHKMMPGPADKSYGIHVAKLAGLPADLLSRADTILKQLEA 783
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 19/42 (45%), Positives = 27/42 (64%)
Query: 209 CMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
M Q+ IK+Q D LF+++G FYELF+ DA+ GA L +
Sbjct: 1 MMQQYNAIKAQYPDAFLFYRIGDFYELFNDDAIKGAQLLELT 42
>gi|145532012|ref|XP_001451767.1| hypothetical protein [Paramecium tetraurelia strain d4-2]
gi|124419433|emb|CAK84370.1| unnamed protein product [Paramecium tetraurelia]
Length = 1111
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 39/96 (40%), Positives = 53/96 (55%), Gaps = 6/96 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A L Q I T+FATHYH + N+ M + ++
Sbjct: 987 RGTSTYDGVALASAVLRYLSQKIKPKTIFATHYHILLDEFALFKNIQQCVMKHYQE---- 1042
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
+D +VF YKL+ G+ KSF NVA++AGIP DV+K
Sbjct: 1043 -MDKVVFEYKLINGVAEKSFATNVAKIAGIPSDVIK 1077
Score = 65.5 bits (158), Expect = 8e-08, Method: Compositional matrix adjust.
Identities = 27/73 (36%), Positives = 45/73 (61%)
Query: 172 FLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGK 231
F+ PD I DA+ R P P+Y+P TL +P +K +P Q+W K ++D ++FF+ G+
Sbjct: 127 FVQPDFIRDAEGRRPNDPNYDPSTLDIPIAQYQKLSPMFRQYWNAKKAHYDSLVFFRCGR 186
Query: 232 FYELFHMDAVIGA 244
+ + + DA+I A
Sbjct: 187 WINVMYNDAIIIA 199
>gi|398347395|ref|ZP_10532098.1| DNA mismatch repair protein MutS [Leptospira broomii str. 5399]
Length = 854
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 44/109 (40%), Positives = 59/109 (54%), Gaps = 8/109 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCL--TVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IA LE ++ TVFATHYH + L P V +M +E +
Sbjct: 687 RGTSTYDGMSIAWAILEYLSEMSVRPKTVFATHYHELTE-LSRLPGVWNIHMETLEKE-- 743
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
D ++FL K+ PG KSFG VA+LAG+P+ VVK + +E+R
Sbjct: 744 ---DKVLFLRKVRPGKAKKSFGIYVAQLAGVPDPVVKRAGEILSDLESR 789
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
TP M Q+ IK++ D +LFF++G FYE+F DA I ++ L + K
Sbjct: 20 TPMMRQYLDIKARFKDSILFFRMGDFYEMFLEDAKIASNILDIALTK 66
>gi|448440866|ref|ZP_21588864.1| DNA mismatch repair protein MutS [Halorubrum saccharovorum DSM
1137]
gi|445689774|gb|ELZ42000.1| DNA mismatch repair protein MutS [Halorubrum saccharovorum DSM
1137]
Length = 965
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/97 (43%), Positives = 55/97 (56%), Gaps = 8/97 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IAR E F+ ++G +FATHYH + L EE AF + R
Sbjct: 756 RGTATTDGRAIARAAAE-FIHDELGATALFATHYHDLTD-LAEERERAFNL--HFTATRE 811
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
DG + FL+++VPG S+G VAELAG+P VV+
Sbjct: 812 DG--DVTFLHRVVPGASSSSYGVEVAELAGVPAPVVE 846
>gi|261878911|ref|ZP_06005338.1| DNA mismatch repair protein MutS [Prevotella bergensis DSM 17361]
gi|270334493|gb|EFA45279.1| DNA mismatch repair protein MutS [Prevotella bergensis DSM 17361]
Length = 888
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 59/180 (32%), Positives = 81/180 (45%), Gaps = 18/180 (10%)
Query: 329 QTYLRTQCAHFGCTVIYSEAQKK--QKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVT 386
QT L A GC V A+ K + S S+ +S T+ N+ N VT
Sbjct: 644 QTALIVLLAQIGCFVPAERARVGLVDKIFTRVGASDNLSQGESTFMVEMTEASNILNNVT 703
Query: 387 PEC--------RGTGTNDGCVIARVTLEKFLQ---IGCLTVFATHYHSVARRLREEPNVA 435
P RGT T DG IA +E + T+FATHYH + E + A
Sbjct: 704 PHSLVLFDELGRGTSTYDGISIAWAIVEYLHEQPKAQARTLFATHYHELNEM---EKHFA 760
Query: 436 FEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
+ K DG ++FL KL+PG SFG +VAE+AG+P +V+ T+ Q+EA
Sbjct: 761 RIKNFNVSVKEVDG--KVIFLRKLMPGGSEHSFGIHVAEIAGMPPSIVRRSNTILKQLEA 818
>gi|340354919|ref|ZP_08677615.1| DNA mismatch repair protein MutS [Sporosarcina newyorkensis 2681]
gi|339622933|gb|EGQ27444.1| DNA mismatch repair protein MutS [Sporosarcina newyorkensis 2681]
Length = 855
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 36/96 (37%), Positives = 59/96 (61%), Gaps = 6/96 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A+ +E Q+G T+F+THYH + + E +A ++ K +
Sbjct: 688 RGTSTYDGMALAQAMMEHIHEQVGANTLFSTHYHELTKL---EDVLARLLNVHVAAKEQN 744
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
G +VFL+K++PG +S+G +VAELAG+P ++V+
Sbjct: 745 G--KVVFLHKVLPGAADRSYGIHVAELAGLPAELVE 778
Score = 45.1 bits (105), Expect = 0.10, Method: Compositional matrix adjust.
Identities = 18/39 (46%), Positives = 25/39 (64%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAV 241
+ + TP + Q+ IK Q D LFF++G FYE+F DAV
Sbjct: 1 MSQHTPMIQQYLQIKEQYTDAFLFFRLGDFYEMFFEDAV 39
>gi|385828869|ref|YP_005866641.1| DNA mismatch repair protein [Lactobacillus rhamnosus GG]
gi|259650514|dbj|BAI42676.1| DNA mismatch repair protein [Lactobacillus rhamnosus GG]
Length = 860
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 12/110 (10%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYH---SVARRLREEPNVAFEYMSYIEDK 445
RGT T DG +A+ +E + T+F+THYH S++ L + NV ++ +E+
Sbjct: 694 RGTATYDGMALAQAIIEYLHDHVHAKTLFSTHYHELTSLSDSLAKLKNV---HVGAVEEH 750
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
N +VFL+K++PG KS+G +VA+LAG+P D++ T+ Q+EA
Sbjct: 751 GN-----LVFLHKMMPGPADKSYGIHVAKLAGLPADLLSRADTILKQLEA 795
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
TP M Q+ IK+Q D LF+++G FYELF+ DA+ GA L +
Sbjct: 11 TPMMQQYNAIKAQYPDAFLFYRIGDFYELFNDDAIKGAQLLELT 54
>gi|238883741|gb|EEQ47379.1| conserved hypothetical protein [Candida albicans WO-1]
Length = 1030
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 48/133 (36%), Positives = 70/133 (52%), Gaps = 8/133 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYHSVARRLREEPN--VAFEYMSYIEDK 445
RGTGT DG +A L+ ++ L +F THY S+ +E PN V +M Y E K
Sbjct: 876 RGTGTIDGISLAYSILKYLIESEFKPLVLFITHYPSIHVLEQEYPNQLVVNYHMGYQEIK 935
Query: 446 RND--GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL- 502
N I I+FLY L G+ S+G NVA+LAGI D++K V+ ++++ L++
Sbjct: 936 NNTPGEIPEIIFLYNLCRGVVNNSYGLNVAKLAGISHDIIKQAYRVSEKVKSDIELKEYW 995
Query: 503 -FIHKFASLVKSG 514
F H +K G
Sbjct: 996 KFAHSLNKALKEG 1008
>gi|90086235|dbj|BAE91670.1| unnamed protein product [Macaca fascicularis]
Length = 583
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 52/157 (33%), Positives = 83/157 (52%), Gaps = 13/157 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPN-VAFEYMSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + + V +M ++ E
Sbjct: 426 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDE 485
Query: 444 DKRNDGI----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
K + G D + FLY++ GI +S+G NVA+LA IP +++K + ++E N
Sbjct: 486 SKLDPGEEQVPDFVTFLYQITRGIAARSYGLNVAKLADIPGEILKKAAHKSKELEGLINT 545
Query: 500 RQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQT 536
++ + FA L + ++LQK E + E+QT
Sbjct: 546 KRKRLKYFAKLWTMH---NAQDLQKWTEEFEMEETQT 579
>gi|449543819|gb|EMD34794.1| hypothetical protein CERSUDRAFT_125339 [Ceriporiopsis subvermispora
B]
Length = 971
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 42/108 (38%), Positives = 59/108 (54%), Gaps = 3/108 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVA-FEYMSYIEDKRN 447
RGT T DG +A E QI +FATH+H + +E P+V ++++ +
Sbjct: 781 RGTSTYDGFGLAWAISEHIASQIHAFCLFATHFHELTALDQEVPHVKNLHVVAHVSNSDE 840
Query: 448 DGIDT-IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
D I LYK+ PGIC +SFG +VAELA PE+VVK A ++E
Sbjct: 841 AARDREITLLYKVEPGICDQSFGIHVAELANFPENVVKLAKRKADELE 888
>gi|338706293|ref|YP_004673061.1| DNA mismatch repair protein MutS [Treponema paraluiscuniculi
Cuniculi A]
gi|335344354|gb|AEH40270.1| DNA mismatch repair protein MutS [Treponema paraluiscuniculi
Cuniculi A]
Length = 900
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA+ E L + T+FATHYH ++R +A + +++ +
Sbjct: 709 RGTATEDGLSIAQAVSEYLLHHVRAKTLFATHYHELSR-------LAHPRLEHLKLDVLE 761
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
+TIVFL K+ PG C S+G VA LAG+PE V+ + Q++ R
Sbjct: 762 TDNTIVFLKKVTPGSCGSSYGIYVARLAGLPESVLARACELLKQLQQR 809
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/54 (40%), Positives = 33/54 (61%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESG 256
L TP M Q+ I++Q+ D VLFF++G FYE+F DA+ + L + K +G
Sbjct: 4 LASDTPLMRQYHAIRAQHPDAVLFFRLGDFYEMFDSDALHVSTLLGLTLTKRNG 57
>gi|448414956|ref|ZP_21577905.1| DNA mismatch repair protein MutS [Halosarcina pallida JCM 14848]
gi|445681653|gb|ELZ34083.1| DNA mismatch repair protein MutS [Halosarcina pallida JCM 14848]
Length = 941
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 41/98 (41%), Positives = 56/98 (57%), Gaps = 5/98 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IAR T E F+ ++G T+FATHYH + L E+ + AF +E
Sbjct: 727 RGTSTTDGLAIARATTE-FVHDEVGATTLFATHYHDLT-ALVEDLSDAFNLHFTVEKTEG 784
Query: 448 D-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
D G + FL+++ G S+G VAELAG+P VV+
Sbjct: 785 DGGTPDVTFLHRVADGASSSSYGVEVAELAGVPPAVVE 822
>gi|339448738|ref|ZP_08652294.1| DNA mismatch repair protein MutS [Lactobacillus fructivorans KCTC
3543]
Length = 885
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 37/106 (34%), Positives = 61/106 (57%), Gaps = 6/106 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A+ +E IG T+F+THYH + E ++ ++ +E N
Sbjct: 691 RGTSTYDGMALAQAIIEYIHDNIGAKTLFSTHYHELTDLDHELKHLKNVHVGAVEKNGN- 749
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+VFL+K++ G +S+G NVA+LAG+P+ ++K TV ++E
Sbjct: 750 ----LVFLHKIMNGPADRSYGINVAKLAGLPDQLLKRANTVLEKLE 791
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/52 (44%), Positives = 32/52 (61%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
K+ TP M Q+ +K Q D LF+++G FYELF+ DAV GA L + + S
Sbjct: 5 KQTTPMMQQYQEVKDQYPDAFLFYRIGDFYELFNEDAVKGAQLLELTLTQRS 56
>gi|395825567|ref|XP_003785999.1| PREDICTED: DNA mismatch repair protein Msh3 [Otolemur garnettii]
Length = 1126
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 43/132 (32%), Positives = 72/132 (54%), Gaps = 11/132 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEY-MSYI----E 443
RGT T+DG IA TLE F+ + LT+F THY V + P Y M ++ E
Sbjct: 968 RGTSTHDGIAIAYATLEYFITDVKSLTLFVTHYPPVCELEKSYPQQVGNYHMGFLVSEDE 1027
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
+++ G D + FLY++ GI +S+G NVA+LA +P ++++ + ++E N
Sbjct: 1028 SEQDPGKEEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILQKAAHKSKELEGLVN 1087
Query: 499 LRQLFIHKFASL 510
+++ + FA+L
Sbjct: 1088 MKRKRLKYFANL 1099
>gi|116748176|ref|YP_844863.1| DNA mismatch repair protein MutS [Syntrophobacter fumaroxidans
MPOB]
gi|171460791|sp|A0LG76.1|MUTS_SYNFM RecName: Full=DNA mismatch repair protein MutS
gi|116697240|gb|ABK16428.1| DNA mismatch repair protein MutS [Syntrophobacter fumaroxidans
MPOB]
Length = 889
Score = 68.9 bits (167), Expect = 7e-09, Method: Compositional matrix adjust.
Identities = 54/182 (29%), Positives = 79/182 (43%), Gaps = 18/182 (9%)
Query: 329 QTYLRTQCAHFGCTVIYSEAQKK--QKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVT 386
Q L H G V SEA + + S ++ +S + N+ ++ T
Sbjct: 632 QAALIVLMGHIGSFVPASEAHIGLVDRIFTRVGASDDLARGRSTFMVEMQETANILHHAT 691
Query: 387 PEC--------RGTGTNDGCVIARVT---LEKFLQIGCLTVFATHYHSVARRLREEPNVA 435
P RGT T DG IA L F + G T+FATHYH + R P V
Sbjct: 692 PRSLIILDEIGRGTSTYDGLSIAWAVAEHLHDFQEKGIKTLFATHYHELTELARSRPRVR 751
Query: 436 FEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
+ I + + + I+F +KLV G +S+G VA LAG+PE+V + Q+E+
Sbjct: 752 -NFNVAIREWQQE----ILFFHKLVQGGASRSYGIQVARLAGLPEEVTGRAREILQQLES 806
Query: 496 RH 497
H
Sbjct: 807 GH 808
>gi|413920016|gb|AFW59948.1| hypothetical protein ZEAMMB73_053204 [Zea mays]
Length = 223
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 18/122 (14%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLRE-EPNVAFEYMSYIEDKR- 446
RGT T+DG IA TL L + C+ +F THY + RE E +V ++SY+ ++
Sbjct: 24 RGTSTHDGVAIAYSTLHYLLKEKKCIVIFVTHYPKILDIQREFEGSVGAYHVSYLATRKL 83
Query: 447 --------------NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQ 492
ND + I+FLYKLV G +SFG NVA LA +P +K + +A +
Sbjct: 84 LEVTDKQVETSPEAND-LGEIIFLYKLVAGASDRSFGLNVALLAQLPSRCIKRASVMAAK 142
Query: 493 ME 494
++
Sbjct: 143 LQ 144
>gi|197122562|ref|YP_002134513.1| DNA mismatch repair protein MutS [Anaeromyxobacter sp. K]
gi|238689851|sp|B4UCY7.1|MUTS_ANASK RecName: Full=DNA mismatch repair protein MutS
gi|196172411|gb|ACG73384.1| DNA mismatch repair protein MutS [Anaeromyxobacter sp. K]
Length = 882
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI-GCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA E + GC T+FATHYH + RE P V ++ R
Sbjct: 710 RGTSTFDGVSIAWAVAEHLHDVTGCRTLFATHYHELQDLARERPAVRNLTVAV----REV 765
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
G D +VFL KLV G +S+G VA+LAG+P +V+ + +EA
Sbjct: 766 G-DRVVFLRKLVQGGASRSYGIEVAKLAGLPAEVLARAREILKNLEA 811
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 200 PEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
PE + TP M Q+ K++ D +LFF++G FYE+F DA+ ++ L + S
Sbjct: 2 PEIAQAHTPMMRQYLETKARYPDAILFFRLGDFYEMFFEDALTASEALQITLTARS 57
>gi|32488645|emb|CAE03438.1| OSJNBa0032F06.21 [Oryza sativa Japonica Group]
Length = 1085
Score = 68.9 bits (167), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 42/122 (34%), Positives = 61/122 (50%), Gaps = 17/122 (13%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLRE-EPNVAFEYMSY------ 441
RGT T+DG IA TL L + C+ +F THY + LRE E +V ++SY
Sbjct: 889 RGTSTHDGVAIAYATLHYLLKEKKCMVIFVTHYPKILNILREFEGSVGAYHVSYLATRKL 948
Query: 442 ---------IEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQ 492
I + + I FLYKLV G +SFG NVA LA +P ++ + +A +
Sbjct: 949 LEVADRQMVINNTETKDLGEITFLYKLVAGASDRSFGLNVALLAQLPSSCIERASVMAAK 1008
Query: 493 ME 494
++
Sbjct: 1009 LQ 1010
>gi|170744569|ref|YP_001773224.1| DNA mismatch repair protein MutS [Methylobacterium sp. 4-46]
gi|168198843|gb|ACA20790.1| DNA mismatch repair protein MutS [Methylobacterium sp. 4-46]
Length = 962
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 56/109 (51%), Gaps = 12/109 (11%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI-GCLTVFATHYH---SVARRLREEPNVAFEYMSYIEDK 445
RGT T DG IA LE ++ GC +FATH+H +A+RL N + + D
Sbjct: 796 RGTATFDGLSIAWACLEHLHEVTGCRALFATHFHELTGLAKRLERLSNATLKVTEWEGD- 854
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+VFL+++VPG +S+G VA LAG+P V+ + +E
Sbjct: 855 -------VVFLHEVVPGAADRSYGLQVARLAGLPASVIARAKVILADLE 896
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 22/61 (36%), Positives = 30/61 (49%)
Query: 199 PPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCT 258
PP +P M Q+ IKS N +LF+++G FYELF DA I + L +
Sbjct: 55 PPPAEAVASPMMAQYIEIKSANPGLLLFYRMGDFYELFFEDAEIASRALGIVLTRRGKHA 114
Query: 259 G 259
G
Sbjct: 115 G 115
>gi|396082264|gb|AFN83874.1| MutS-like DNA mismatch repair protein [Encephalitozoon romaleae
SJ-2008]
Length = 914
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 52/94 (55%), Gaps = 8/94 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG IAR +E + C +F+THYH + + V+ YM + ++
Sbjct: 816 RGTSTKDGECIARAVIEYLKRKECHVLFSTHYHGIIENV---EGVSNGYMGSVVKGKD-- 870
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
IVFLY+L+ G+ S G VA +AG+PED+V
Sbjct: 871 ---IVFLYRLMSGVSRDSHGLYVARMAGVPEDIV 901
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 32/76 (42%), Positives = 46/76 (60%), Gaps = 2/76 (2%)
Query: 169 HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFK 228
Y+F+ + I D + R Y+P TL +P + TP Q+W IK ++FD ++FFK
Sbjct: 96 RYRFM--EDIRDKNGRKKGDEGYDPSTLLIPENEYNRLTPFEKQFWDIKKEHFDTIVFFK 153
Query: 229 VGKFYELFHMDAVIGA 244
GKFYEL+ DA+IGA
Sbjct: 154 KGKFYELYENDALIGA 169
>gi|449669906|ref|XP_002164261.2| PREDICTED: DNA mismatch repair protein Msh3-like [Hydra
magnipapillata]
Length = 916
Score = 68.6 bits (166), Expect = 8e-09, Method: Compositional matrix adjust.
Identities = 40/126 (31%), Positives = 72/126 (57%), Gaps = 4/126 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVAR-RLREEPNVAFEYMSYIEDKRN 447
RGT T+DG IA TLE F++ I C +F THY ++ + + +++ +M+++ + +
Sbjct: 781 RGTSTHDGTAIAYATLEHFIEKIQCFLLFITHYPTLCELKCKYTKSLSLYHMTFMSNDVD 840
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKF 507
++ IV LYKL G +S+G NVA +AGI E ++ ++ ++E +++L F
Sbjct: 841 --VNAIVLLYKLTKGKENRSYGINVARMAGIDETILNKAAYMSKELETSTFMKRLLKRVF 898
Query: 508 ASLVKS 513
V+S
Sbjct: 899 NQQVRS 904
>gi|170727679|ref|YP_001761705.1| DNA mismatch repair protein MutS [Shewanella woodyi ATCC 51908]
gi|238688717|sp|B1KPS7.1|MUTS_SHEWM RecName: Full=DNA mismatch repair protein MutS
gi|169813026|gb|ACA87610.1| DNA mismatch repair protein MutS [Shewanella woodyi ATCC 51908]
Length = 858
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 58/189 (30%), Positives = 83/189 (43%), Gaps = 24/189 (12%)
Query: 329 QTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYAS-----KAKSNHQRVATKKKNVEN 383
Q L T AH GC Y AQ V + ++ + +S T+ N+ +
Sbjct: 630 QVALITLMAHIGC---YVPAQSATIGPVDRIFTRIGAADDLASGRSTFMVEMTETANILH 686
Query: 384 YVTPEC--------RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNV 434
TP+ RGT T DG +A E Q I +T+FATHY + + NV
Sbjct: 687 NATPKSLVLMDEIGRGTSTYDGLSLAWSAAEYLAQKIEAMTLFATHYFELTQLPELISNV 746
Query: 435 AFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
A ++ IE DTIVF++ + G KS+G VA LAG+P V+ +E
Sbjct: 747 ANVHLDAIEHG-----DTIVFMHAVQDGAASKSYGLQVAALAGVPNPVILAAKHKLHHLE 801
Query: 495 AR--HNLRQ 501
+R HN +Q
Sbjct: 802 SRDNHNTQQ 810
Score = 52.4 bits (124), Expect = 7e-04, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 36/58 (62%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGE 260
L+K TP M Q+ T+K++N D +LF+++G FYELF+ DA ++ L S G+
Sbjct: 9 LEKHTPMMRQYLTLKAENPDVLLFYRMGDFYELFYDDAKKASELLGISLTARGKSGGD 66
>gi|402080962|gb|EJT76107.1| DNA mismatch repair protein MSH3 [Gaeumannomyces graminis var.
tritici R3-111a-1]
Length = 1148
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/127 (32%), Positives = 62/127 (48%), Gaps = 14/127 (11%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVAR-------------RLREEPNVA 435
RGT T+DG IA L+ + + CLT+F THY S+AR +R + A
Sbjct: 990 RGTSTHDGAAIAHAVLDHVVRETRCLTLFITHYQSLARVAEGLGRDLVRNVHMRFTSSRA 1049
Query: 436 FEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
+ D +D + I FLY++ G+ +S+G NVA LA IP ++ + ME
Sbjct: 1050 EKAGGDTADAEDDVDEEITFLYEVTDGVAHRSYGLNVARLARIPRKILDVAARKSRHMED 1109
Query: 496 RHNLRQL 502
+R+L
Sbjct: 1110 EVKMRRL 1116
>gi|220917347|ref|YP_002492651.1| DNA mismatch repair protein MutS [Anaeromyxobacter dehalogenans
2CP-1]
gi|254766610|sp|B8JA66.1|MUTS_ANAD2 RecName: Full=DNA mismatch repair protein MutS
gi|219955201|gb|ACL65585.1| DNA mismatch repair protein MutS [Anaeromyxobacter dehalogenans
2CP-1]
Length = 882
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI-GCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA E + GC T+FATHYH + RE P V ++ R
Sbjct: 710 RGTSTFDGVSIAWAVAEHLHDVTGCRTLFATHYHELQDLARERPAVRNLTVAV----REV 765
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
G D +VFL KLV G +S+G VA+LAG+P +V+ + +EA
Sbjct: 766 G-DRVVFLRKLVQGGASRSYGIEVAKLAGLPAEVLARAREILKNLEA 811
Score = 48.5 bits (114), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 200 PEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
PE + TP M Q+ K++ D +LFF++G FYE+F DA+ ++ L + S
Sbjct: 2 PEIAQAHTPMMRQYLETKARYPDAILFFRLGDFYEMFFEDALTASEALQITLTARS 57
>gi|340518853|gb|EGR49093.1| DNA mismatch repair protein [Trichoderma reesei QM6a]
Length = 922
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/112 (35%), Positives = 58/112 (51%), Gaps = 7/112 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVA-FEYMSYIEDKRN 447
RGT T DG +A E + +IGC +FATH+H + + P V ++I +
Sbjct: 738 RGTSTYDGFGLAWAISEHIVKEIGCFAMFATHFHELTALADQYPQVKNMHVTAHISGTNS 797
Query: 448 DGIDT-----IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
G D + LYK+ PGIC +SFG +VAEL P+ VV+ A ++E
Sbjct: 798 GGDDVNAKREVTLLYKVEPGICDQSFGIHVAELVRFPDKVVRMAKRKADELE 849
>gi|154293501|ref|XP_001547279.1| hypothetical protein BC1G_13901 [Botryotinia fuckeliana B05.10]
Length = 737
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 54/106 (50%), Gaps = 4/106 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IGC+ FATHYHS+A P V + M+ D +
Sbjct: 569 RGTSSYDGVSVAQAVLHHVASHIGCIGFFATHYHSLALEFDSHPEVINKRMAIEVDNESR 628
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+++FLYKL G+ SFG + A + GIP VV A + E
Sbjct: 629 ---SVLFLYKLENGVAEGSFGMHCASMCGIPRKVVDRAEVAAREWE 671
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 18/55 (32%), Positives = 37/55 (67%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLR 333
PD++E L++++ AFD K+A ++P+ GV++++D D I+ I +E+ + L+
Sbjct: 268 IPDLAEPLQWWKTAFDRKKAKEHKILVPERGVEEDFDASQDRIEEINQELASLLK 322
>gi|448474840|ref|ZP_21602628.1| DNA mismatch repair protein MutS [Halorubrum aidingense JCM 13560]
gi|445817103|gb|EMA66980.1| DNA mismatch repair protein MutS [Halorubrum aidingense JCM 13560]
Length = 955
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IAR E F+ +G T+FATHYH + E V + + R
Sbjct: 761 RGTATTDGRAIARAAAE-FIHDDLGATTLFATHYHELTDLAAERERV---FNLHFTATRE 816
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
DG + FL+++VPG S+G VAELAG+P VV+
Sbjct: 817 DG--DVTFLHRIVPGASSSSYGVEVAELAGVPAPVVE 851
>gi|343425332|emb|CBQ68868.1| related to DNA mismatch repair protein [Sporisorium reilianum SRZ2]
Length = 1162
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 47/124 (37%), Positives = 61/124 (49%), Gaps = 15/124 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLRE-EPNVAFEYMSYIEDKR 446
RGT T+DG IA LE L + VF THY + R V +M+++E
Sbjct: 1002 RGTSTHDGVCIASGVLEWLLARERAPNVVFITHYLQLGEMERRFARKVRNMHMAFVETSP 1061
Query: 447 ND-----GIDT-------IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
D G+D I FLYKL GI KSFG + A LAG+PE ++K V+ Q+E
Sbjct: 1062 ADFAEFGGLDDDDAATGHIEFLYKLRAGIASKSFGIHCARLAGLPEGILKSAARVSAQLE 1121
Query: 495 ARHN 498
RH
Sbjct: 1122 QRHR 1125
>gi|238859677|ref|NP_001154964.1| mutS homolog 2 [Nasonia vitripennis]
Length = 919
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 39/100 (39%), Positives = 57/100 (57%), Gaps = 11/100 (11%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEY--MSYIEDKR 446
RGT T DGC IA E ++ +FATH+H + R L E+ + A Y + + DK
Sbjct: 748 RGTSTYDGCGIAWAIAEHLAKEVKAYCLFATHFHEITR-LAEDVSTASNYHVTAMVGDK- 805
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
+ LYK+ PGIC +SFG +VA++A PE+V++F
Sbjct: 806 ------LTLLYKVKPGICDQSFGIHVAKMADFPEEVIEFA 839
>gi|389640915|ref|XP_003718090.1| DNA mismatch repair protein msh-2 [Magnaporthe oryzae 70-15]
gi|351640643|gb|EHA48506.1| DNA mismatch repair protein msh-2 [Magnaporthe oryzae 70-15]
gi|440475156|gb|ELQ43857.1| DNA mismatch repair protein msh-2 [Magnaporthe oryzae Y34]
gi|440487085|gb|ELQ66891.1| DNA mismatch repair protein msh-2 [Magnaporthe oryzae P131]
Length = 924
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 59/193 (30%), Positives = 86/193 (44%), Gaps = 24/193 (12%)
Query: 330 TYLR-----TQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVA--TKKKNVE 382
TY+R A GC V SEA+ +L S+ K +A + N+
Sbjct: 666 TYIRQIGVIALMAQIGCFVPCSEAELTIFDAILARVGASDSQLKGVSTFMAEMLETANIL 725
Query: 383 NYVTPEC--------RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPN 433
T E RGT T DG +A E + +IGC +FATH+H + +
Sbjct: 726 KSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVVEIGCSALFATHFHELTALAEQHKQ 785
Query: 434 VA-FEYMSYI----EDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTT 488
VA ++I +D + D + LYK+ PGIC +SFG +VAEL P+ VV+
Sbjct: 786 VANLHVTAHISGTGDDAKADEKREVTLLYKVEPGICDQSFGIHVAELVRFPDKVVRMAKR 845
Query: 489 VAFQME---ARHN 498
A ++E +HN
Sbjct: 846 KADELEDFTTKHN 858
>gi|90399078|emb|CAJ86300.1| H0124B04.17 [Oryza sativa Indica Group]
Length = 2505
Score = 68.6 bits (166), Expect = 9e-09, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 17/122 (13%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLRE-EPNVAFEYMSYIEDKR- 446
RGT T+DG IA TL L + C+ +F THY + LRE E +V ++SY+ ++
Sbjct: 1126 RGTSTHDGVAIAYATLHYLLKEKKCMVIFVTHYPKILNILREFEGSVGAYHVSYLATRKL 1185
Query: 447 --------------NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQ 492
+ I FLYKLV G +SFG NVA LA +P ++ + +A +
Sbjct: 1186 LEVADRQMVINNTETKDLGEITFLYKLVAGASDRSFGLNVALLAQLPSSCIERASVMAAK 1245
Query: 493 ME 494
++
Sbjct: 1246 LQ 1247
>gi|1439600|gb|AAB39930.1| G/T mismatch binding protein homolog, partial [Mus musculus]
Length = 50
Score = 68.6 bits (166), Expect = 1e-08, Method: Composition-based stats.
Identities = 29/47 (61%), Positives = 34/47 (72%)
Query: 180 DADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLF 226
D RR P HP++NP TLYVP EFL TP M +WW +KSQNFD V+F
Sbjct: 4 DEHRRRPDHPEFNPTTLYVPEEFLNSCTPGMRKWWQLKSQNFDLVIF 50
>gi|218195849|gb|EEC78276.1| hypothetical protein OsI_17972 [Oryza sativa Indica Group]
Length = 2246
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 17/122 (13%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLRE-EPNVAFEYMSYIEDKR- 446
RGT T+DG IA TL L + C+ +F THY + LRE E +V ++SY+ ++
Sbjct: 892 RGTSTHDGVAIAYATLHYLLKEKKCMVIFVTHYPKILNILREFEGSVGAYHVSYLATRKL 951
Query: 447 --------------NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQ 492
+ I FLYKLV G +SFG NVA LA +P ++ + +A +
Sbjct: 952 LEVADRQMVINNTETKDLGEITFLYKLVAGASDRSFGLNVALLAQLPSSCIERASVMAAK 1011
Query: 493 ME 494
++
Sbjct: 1012 LQ 1013
>gi|115299208|sp|Q5QUB6.2|MUTS_IDILO RecName: Full=DNA mismatch repair protein MutS
Length = 871
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A + Q+ CLT+FATHY + E P ++ D +
Sbjct: 703 RGTSTYDGLSLAWSCADYLSRQLQCLTLFATHYFELTELAEELPATVNVHV----DAKEH 758
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
G DTI FL+K+ PG +SFG VA+LAG+PE V+ ++E H+
Sbjct: 759 G-DTIAFLHKVSPGAASQSFGLQVAKLAGVPEHVIHKAKQKLSELEHTHH 807
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 27/65 (41%), Positives = 35/65 (53%), Gaps = 4/65 (6%)
Query: 200 PEFLKKQ----TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
PEF KQ TP M Q+ IK+++ D +LF+++G FYELF DA A L S
Sbjct: 2 PEFSDKQIQSHTPMMQQYLRIKAEHADMLLFYRMGDFYELFFEDAKRSAQLLDISLTARG 61
Query: 256 GCTGE 260
GE
Sbjct: 62 QSNGE 66
>gi|348026753|ref|YP_004766558.1| DNA mismatch repair protein mutS [Megasphaera elsdenii DSM 20460]
gi|341822807|emb|CCC73731.1| DNA mismatch repair protein mutS [Megasphaera elsdenii DSM 20460]
Length = 857
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/106 (36%), Positives = 59/106 (55%), Gaps = 6/106 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IAR +E L+ I LT+FATHYH + + P + ++ E +N
Sbjct: 693 RGTSTFDGMSIARAVIEYCLKHIHALTLFATHYHELIAMADDSPKIKNYTVAVKERGKN- 751
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
I FL +++PG +S+G +VA LAG+PE ++K + +E
Sbjct: 752 ----IKFLRRIIPGGADRSYGLHVARLAGLPESLLKRADVILEDLE 793
>gi|47226649|emb|CAG07808.1| unnamed protein product [Tetraodon nigroviridis]
Length = 633
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/123 (34%), Positives = 68/123 (55%), Gaps = 11/123 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEP-NVAFEYMSYIEDKRN 447
RGT T+DG IA TLE F++ + LT+F THY + R P +V+ +M+++ ++ +
Sbjct: 510 RGTSTHDGIAIAYATLEYFIRDVKALTLFVTHYPPLCELERVYPEHVSNYHMAFLLNEPD 569
Query: 448 DGIDT---------IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
DT I FLY+L G +S+G NVA LA IP+ ++ A ++E+ N
Sbjct: 570 VAADTDGAEVAPEFITFLYQLTQGAAGRSYGLNVARLADIPDPILHTAARKAQELESTVN 629
Query: 499 LRQ 501
R+
Sbjct: 630 ARR 632
>gi|407405377|gb|EKF30408.1| mismatch repair protein MSH3, putative [Trypanosoma cruzi
marinkellei]
Length = 946
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVA----RRLREEPNVAFEYMSYIEDK 445
RGT + DG +A T E LQ G +F THY + E V YM + E++
Sbjct: 814 RGTSSFDGIAVAAATFEYLLQRGTTMLFVTHYSHLCEPYLHNTSEGKQVLCYYMGFSEER 873
Query: 446 RNDGIDT---IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
+ + +VF YK PG+ P SFG VA +AG+P DVV ++ +ME R ++ ++
Sbjct: 874 DEEEGNKEPKLVFTYKPTPGVTPSSFGVRVARMAGLPHDVVAEAQRLS-EMEEREHMTRM 932
Query: 503 FIHKFASLVKS 513
+ + V +
Sbjct: 933 ALMRLRRFVNA 943
>gi|86158123|ref|YP_464908.1| DNA mismatch repair protein MutS [Anaeromyxobacter dehalogenans
2CP-C]
gi|123497694|sp|Q2IIJ3.1|MUTS_ANADE RecName: Full=DNA mismatch repair protein MutS
gi|85774634|gb|ABC81471.1| DNA mismatch repair protein MutS [Anaeromyxobacter dehalogenans
2CP-C]
Length = 882
Score = 68.6 bits (166), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/107 (40%), Positives = 57/107 (53%), Gaps = 6/107 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI-GCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA E + GC T+FATHYH + RE P V ++ R
Sbjct: 710 RGTSTFDGVSIAWAVAEHLHDVTGCRTLFATHYHELQDLARERPAVRNLTVAV----REV 765
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
G D +VFL KLV G +S+G VA+LAG+P +V+ + +EA
Sbjct: 766 G-DRVVFLRKLVQGGASRSYGIEVAKLAGLPAEVLARAREILKNLEA 811
Score = 48.1 bits (113), Expect = 0.012, Method: Compositional matrix adjust.
Identities = 20/56 (35%), Positives = 32/56 (57%)
Query: 200 PEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
PE + TP M Q+ K++ D +LFF++G FYE+F DA+ ++ L + S
Sbjct: 2 PEIAQAHTPMMRQYLETKARYPDAILFFRLGDFYEMFFEDALTASEALQITLTARS 57
>gi|365919700|ref|ZP_09444072.1| DNA mismatch repair protein MutS [Cardiobacterium valvarum F0432]
gi|364578932|gb|EHM56114.1| DNA mismatch repair protein MutS [Cardiobacterium valvarum F0432]
Length = 866
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIG-CLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGTGT DG +A E+ + LT+FATHY + N+ +++ +E
Sbjct: 697 RGTGTYDGLSLAWAAAERLARDNRALTLFATHYFELTELAETHKNIKNIHLAAVEHH--- 753
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
D IVFL+ + G KS+G VA LAG+P D + T Q+E R +
Sbjct: 754 --DNIVFLHHVEEGAASKSYGLQVARLAGVPLDTIHAATAKLRQLETRRD 801
>gi|326432823|gb|EGD78393.1| MSH2-Ex5 isoform [Salpingoeca sp. ATCC 50818]
Length = 904
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A E + I C +FATH+H + E PNV +++ ++
Sbjct: 735 RGTSTYDGFGLAWAISEHVAKHIHCFCLFATHFHELTAMSSELPNVT---NLHVDAMTSN 791
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
G + LYK+ PG+C +SFG +VAELA PE VV+ A ++E
Sbjct: 792 G--ALTLLYKIKPGVCDRSFGIHVAELADFPEQVVQMAKDKAAELE 835
>gi|398345415|ref|ZP_10530118.1| DNA mismatch repair protein MutS [Leptospira inadai serovar Lyme
str. 10]
Length = 854
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 59/109 (54%), Gaps = 8/109 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCL--TVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IA LE ++ TVFATHYH + L P V +M +E +
Sbjct: 687 RGTSTYDGMSIAWAILEYLSEMSVRPKTVFATHYHELTE-LSRLPGVWNIHMETLEKE-- 743
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
D ++FL K+ PG KSFG VA+LAG+P+ VV+ + +E+R
Sbjct: 744 ---DKVLFLRKVRPGKAKKSFGIYVAQLAGVPDPVVRRAGEILSDLESR 789
Score = 45.4 bits (106), Expect = 0.072, Method: Compositional matrix adjust.
Identities = 20/47 (42%), Positives = 30/47 (63%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
TP M Q+ IK++ D +LFF++G FYE+F DA I ++ L + K
Sbjct: 20 TPMMRQYLDIKARFTDSILFFRMGDFYEMFLEDAKIASNILDIALTK 66
>gi|344272419|ref|XP_003408029.1| PREDICTED: DNA mismatch repair protein Msh3 [Loxodonta africana]
Length = 1111
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 14/146 (9%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLRE-EPNVAFEYMSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + V +M ++ E
Sbjct: 954 RGTSTHDGIAIAYATLEHFIRDVKSLTLFVTHYPPVCELEKSYSQQVGNYHMGFLVNEDE 1013
Query: 444 DKRNDGID-----TIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K + G + ++ FLY++ GI +S+G NVA+LA +P +++K + +E N
Sbjct: 1014 SKEDPGKEEQIPSSVTFLYQITRGIAGRSYGLNVAKLADVPGEILKTAARKSKDLEGLVN 1073
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQK 524
+++ + FA L D ++LQK
Sbjct: 1074 MKRKRLKHFAKLWTVN---DAKDLQK 1096
>gi|56459853|ref|YP_155134.1| DNA mismatch repair protein MutS [Idiomarina loihiensis L2TR]
gi|56178863|gb|AAV81585.1| Mismatch repair ATPase [Idiomarina loihiensis L2TR]
Length = 843
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A + Q+ CLT+FATHY + E P ++ D +
Sbjct: 675 RGTSTYDGLSLAWSCADYLSRQLQCLTLFATHYFELTELAEELPATVNVHV----DAKEH 730
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
G DTI FL+K+ PG +SFG VA+LAG+PE V+ ++E H+
Sbjct: 731 G-DTIAFLHKVSPGAASQSFGLQVAKLAGVPEHVIHKAKQKLSELEHTHH 779
>gi|346327086|gb|EGX96682.1| DNA mismatch repair protein MSH2 [Cordyceps militaris CM01]
Length = 930
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 60/113 (53%), Gaps = 8/113 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVA-FEYMSYI--EDK 445
RGT T DG +A E + +I C +FATH+H + + PNVA ++I D
Sbjct: 745 RGTSTYDGFGLAWAISEHIVKEIRCFALFATHFHELTALADQHPNVANLHVTAHIGGADG 804
Query: 446 RNDGIDT----IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+G D + LYK+ PGIC +SFG +VAEL P+ VV+ A ++E
Sbjct: 805 GKNGDDGAKREVTLLYKVEPGICDQSFGIHVAELVRFPDKVVRMAKRKADELE 857
>gi|254578468|ref|XP_002495220.1| ZYRO0B06160p [Zygosaccharomyces rouxii]
gi|238938110|emb|CAR26287.1| ZYRO0B06160p [Zygosaccharomyces rouxii]
Length = 957
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/110 (37%), Positives = 61/110 (55%), Gaps = 6/110 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVA-FEYMSYIE---D 444
RGT T DG +A E +IGC +FATH+H + + PNV + ++++E D
Sbjct: 767 RGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTALADKLPNVKNMQVVAHLEKDQD 826
Query: 445 KRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+N+ D I LYK+ PGI +SFG VAE+ P+ +VK A ++E
Sbjct: 827 GQNES-DDITLLYKVEPGISDQSFGIYVAEVVQFPQKIVKMAKRKANELE 875
>gi|392960659|ref|ZP_10326125.1| DNA mismatch repair protein mutS [Pelosinus fermentans DSM 17108]
gi|421054583|ref|ZP_15517550.1| DNA mismatch repair protein MutS [Pelosinus fermentans B4]
gi|421057355|ref|ZP_15520199.1| DNA mismatch repair protein mutS [Pelosinus fermentans B3]
gi|421065506|ref|ZP_15527247.1| DNA mismatch repair protein mutS [Pelosinus fermentans A12]
gi|421071446|ref|ZP_15532564.1| DNA mismatch repair protein mutS [Pelosinus fermentans A11]
gi|392440685|gb|EIW18354.1| DNA mismatch repair protein MutS [Pelosinus fermentans B4]
gi|392447073|gb|EIW24336.1| DNA mismatch repair protein mutS [Pelosinus fermentans A11]
gi|392454795|gb|EIW31614.1| DNA mismatch repair protein mutS [Pelosinus fermentans DSM 17108]
gi|392458760|gb|EIW35254.1| DNA mismatch repair protein mutS [Pelosinus fermentans A12]
gi|392463263|gb|EIW39233.1| DNA mismatch repair protein mutS [Pelosinus fermentans B3]
Length = 864
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 62/109 (56%), Gaps = 6/109 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IAR +E + + T+FATHYH + L + Y ++++ +D
Sbjct: 699 RGTSTFDGMSIARAVIEYIKERVKAKTLFATHYHELTE-LADYHKTVKNYSVAVKERGSD 757
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARH 497
+VFL +++PG KS+G +VA+LAG+P+ V+K + ++E H
Sbjct: 758 ----VVFLRRIIPGGADKSYGIHVAQLAGLPQKVIKRAQELLVELEQNH 802
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/52 (42%), Positives = 32/52 (61%)
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESG 256
K TP M Q+ IKSQ+ + +LFF++G FYE+F DA + + EL + G
Sbjct: 4 KYTPMMEQYLEIKSQHENEILFFRMGDFYEMFFTDAELASRELEITLTARDG 55
>gi|242077718|ref|XP_002448795.1| hypothetical protein SORBIDRAFT_06g033320 [Sorghum bicolor]
gi|241939978|gb|EES13123.1| hypothetical protein SORBIDRAFT_06g033320 [Sorghum bicolor]
Length = 280
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/128 (32%), Positives = 65/128 (50%), Gaps = 16/128 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLRE-EPNVAFEYMSYIEDKR- 446
RGT T+DG IA TL L + C+ +F THY + RE E +V ++SY+ +
Sbjct: 81 RGTSTHDGVAIAYATLHYLLKEKKCIVIFVTHYPKILDIQREFEGSVGAYHVSYLATMKL 140
Query: 447 -------------NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQM 493
+ + I+FLYKLV G +SFG NVA LA +P +K + +A ++
Sbjct: 141 LEVTDKPVETSPEANNLGEIIFLYKLVAGASDRSFGLNVALLAQLPSRCIKRASVMAAKL 200
Query: 494 EARHNLRQ 501
+ + R+
Sbjct: 201 QEELSARE 208
>gi|384914572|ref|ZP_10015356.1| DNA mismatch repair protein mutS [Methylacidiphilum fumariolicum
SolV]
gi|384527457|emb|CCG91224.1| DNA mismatch repair protein mutS [Methylacidiphilum fumariolicum
SolV]
Length = 837
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 58/107 (54%), Gaps = 6/107 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIG-CLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A +E + LT+FATHYH +A+ P + M+ +E N
Sbjct: 707 RGTSTFDGLSLAWAIVEDLYKTNKSLTLFATHYHELAKLADFYPEIKNYSMAVVETTEN- 765
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
+VFL K+V G KS+G VA+LAGIPE V++ + ME+
Sbjct: 766 ----VVFLRKVVQGSMNKSYGIQVAKLAGIPERVIEKAKKILSLMES 808
>gi|167630634|ref|YP_001681133.1| DNA mismatch repair protein muts [Heliobacterium modesticaldum
Ice1]
gi|167593374|gb|ABZ85122.1| DNA mismatch repair protein muts [Heliobacterium modesticaldum
Ice1]
Length = 910
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/94 (41%), Positives = 50/94 (53%), Gaps = 5/94 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG IA E ++G ++FATHYH + R P V Y R G
Sbjct: 703 RGTSTFDGMAIAWAVAEAIQRLGAKSLFATHYHELVRLEETLPGV----RCYTIAVRESG 758
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
D IVFL+++ PG KS+G VA LAG+P V+
Sbjct: 759 -DDIVFLHQIRPGGVNKSYGIQVARLAGLPSSVI 791
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 37/56 (66%), Gaps = 1/56 (1%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYM-KESGC 257
+K TP M Q+ IK+++ D +LFF++G FYE+F DA++ + EL + +E+G
Sbjct: 1 MKAVTPMMKQYQEIKNRHPDAILFFRLGDFYEMFGPDALLASRELEITLTGREAGL 56
>gi|222480636|ref|YP_002566873.1| DNA mismatch repair protein MutS [Halorubrum lacusprofundi ATCC
49239]
gi|222453538|gb|ACM57803.1| DNA mismatch repair protein MutS [Halorubrum lacusprofundi ATCC
49239]
Length = 956
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IAR E F+ ++G +FATHYH + E V + + R
Sbjct: 741 RGTATTDGRAIARAAAE-FIHDELGATAIFATHYHDLTDLAAERERV---FNLHFTATRE 796
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
DG + FL+++VPG S+G VAELAG+P VV+
Sbjct: 797 DG--DVTFLHRIVPGASSSSYGVEVAELAGVPAPVVE 831
>gi|418008776|ref|ZP_12648627.1| DNA mismatch repair protein [Lactobacillus casei UW4]
gi|410545732|gb|EKQ20019.1| DNA mismatch repair protein [Lactobacillus casei UW4]
Length = 860
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 66/111 (59%), Gaps = 14/111 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYH---SVARRLREEPNVAFEYMSYIED 444
RGT T DG +A+ +E FL + T+F+THYH S++ L + NV ++ +E+
Sbjct: 694 RGTATYDGMALAQAIIE-FLHDHVHAKTLFSTHYHELTSLSDSLAKLKNV---HVGAVEE 749
Query: 445 KRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
N +VFL+K++PG KS+G +VA+LAG+P D++ + Q+EA
Sbjct: 750 HGN-----LVFLHKMMPGPADKSYGIHVAKLAGLPADLLARADMILKQLEA 795
Score = 48.5 bits (114), Expect = 0.009, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 30/45 (66%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+TP M Q+ IK+Q D LF+++G FYELF+ DA+ GA L +
Sbjct: 10 ETPMMQQYNEIKAQYPDAFLFYRIGDFYELFNDDAIKGAQLLELT 54
>gi|333994679|ref|YP_004527292.1| DNA mismatch repair protein MutS [Treponema azotonutricium ZAS-9]
gi|333735187|gb|AEF81136.1| DNA mismatch repair protein MutS [Treponema azotonutricium ZAS-9]
Length = 884
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/107 (39%), Positives = 58/107 (54%), Gaps = 8/107 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGTGTNDG IA E L +I C T+FATHYH +++ ++ MS + +D
Sbjct: 703 RGTGTNDGLSIAWAVCEDLLDRIKCRTLFATHYHELSQ-------ISHPRMSNRSMEVSD 755
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
IVFL KL G S+G + A LAG+PE V++ + +EA
Sbjct: 756 NNGEIVFLRKLKEGSTSNSYGLHAARLAGLPETVLERAGEILETLEA 802
>gi|14009831|gb|AAK51796.1|AF350880_1 putative mismatch repair protein MSH8 [Trypanosoma brucei]
gi|261332699|emb|CBH15694.1| mismatch repair protein [Trypanosoma brucei gambiense DAL972]
Length = 997
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 56/110 (50%), Gaps = 16/110 (14%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ---IGCLTVFATHYHSVARR------------LREEPNV 434
RGT T+DG IA L + + L +F+THYH++A+ E V
Sbjct: 851 RGTSTHDGYTIAHAMLAAMKKRHPVPPLLLFSTHYHALAQEEHKSMQKSTSSAASETGGV 910
Query: 435 AFEYMSYIEDKRND-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
YM + +D I TI FLY+LVPGIC +S+G VA LAGI VV
Sbjct: 911 QLGYMDFAVSAASDSNIPTITFLYRLVPGICARSYGVEVALLAGISPGVV 960
Score = 57.0 bits (136), Expect = 2e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 186 PKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGAD 245
PK P P ++ +PP L+ Q+W +KS+++D V+FFK GKFYEL+ DA +
Sbjct: 26 PKRP---PSSITIPPRDLEAMAAMERQYWEVKSKHYDVVIFFKKGKFYELYDQDAAMAHR 82
Query: 246 ELACSYMKESGCTGESTL 263
E + ++ G+ L
Sbjct: 83 EFGLKLVVDTTNRGKMRL 100
>gi|374107480|gb|AEY96388.1| FADR168Cp [Ashbya gossypii FDAG1]
Length = 1032
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 10/114 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI--GC-LTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGTGT+DG I+ L F+++ C L +F THY S+ P + +MSYIE+KR
Sbjct: 879 RGTGTHDGISISYALLRYFIELHNACPLILFITHYASLGSI--RSPILGNYHMSYIEEKR 936
Query: 447 -NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV----KFGTTVAFQMEA 495
+ ++VFLYKL G S+G NVA+LA I ++ K T + +ME+
Sbjct: 937 PGENWPSVVFLYKLKEGRAHNSYGLNVAKLADIQTGIINRAYKISTMLKQEMES 990
>gi|359780473|ref|ZP_09283699.1| DNA mismatch repair protein MutS [Pseudomonas psychrotolerans L19]
gi|359371785|gb|EHK72350.1| DNA mismatch repair protein MutS [Pseudomonas psychrotolerans L19]
Length = 858
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/113 (35%), Positives = 62/113 (54%), Gaps = 14/113 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG +A E+ ++ T+FATHY + +P+VA +++ E
Sbjct: 696 RGTSTFDGLSLAWAAAEQLARLRAWTLFATHYFELTVLPDGQPSVANVHLNATEHN---- 751
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
D IVFL+ ++PG +S+G VA+LAG+PEDV+ + AR +L +L
Sbjct: 752 -DRIVFLHHVLPGPASQSYGLAVAQLAGVPEDVI---------LRAREHLARL 794
Score = 44.7 bits (104), Expect = 0.12, Method: Compositional matrix adjust.
Identities = 22/60 (36%), Positives = 32/60 (53%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGEST 262
L TP M Q+ IK Q+ + +LF+++G FYELF+ DA A L + G+S
Sbjct: 4 LSAHTPMMQQYLKIKHQHPEQLLFYRMGDFYELFYDDARRAAKLLDITLTARGASAGKSI 63
>gi|345798537|ref|XP_536307.3| PREDICTED: DNA mismatch repair protein Msh3 [Canis lupus familiaris]
Length = 1066
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/131 (32%), Positives = 71/131 (54%), Gaps = 10/131 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARR----LREEPNVAFEYMSYIED 444
RGT T+DG IA TLE F++ + LT+F THY V L+E N ++ ++
Sbjct: 910 RGTSTHDGIAIAYATLEHFIRDVKSLTLFVTHYPPVCELEKSYLQEVGNYHMGFLVNEDE 969
Query: 445 KRND-----GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNL 499
+ D D + FLY++ GI +S+G NVA+LA +P +++K + + ++E N+
Sbjct: 970 NKEDPGEEPVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAASKSKELEGLVNM 1029
Query: 500 RQLFIHKFASL 510
++ + F L
Sbjct: 1030 KRKRLKCFTKL 1040
>gi|448490537|ref|ZP_21607995.1| DNA mismatch repair protein MutS [Halorubrum californiensis DSM
19288]
gi|445693655|gb|ELZ45797.1| DNA mismatch repair protein MutS [Halorubrum californiensis DSM
19288]
Length = 977
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/97 (41%), Positives = 53/97 (54%), Gaps = 8/97 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IAR E FL ++G +FATHYH + E V + + R
Sbjct: 757 RGTATTDGRAIARAAAE-FLHDELGATALFATHYHGLTDLADERERV---FNLHFTATRE 812
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
DG + FL+++VPG S+G VAELAG+P VV+
Sbjct: 813 DG--DVTFLHRVVPGASSSSYGVEVAELAGVPGPVVE 847
>gi|443702178|gb|ELU00339.1| hypothetical protein CAPTEDRAFT_184281 [Capitella teleta]
Length = 848
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 82/169 (48%), Gaps = 21/169 (12%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A E QI +FATH+H + P V +++ +
Sbjct: 667 RGTSTYDGFGLAWAISEHIATQIKAFCLFATHFHELTSLADVVPTVKNSHVTALTSN--- 723
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR-------- 500
DT+ LYK+ PG+C +SFG +VAELA P+ V++F A ++E N+
Sbjct: 724 --DTLTLLYKVKPGVCDQSFGIHVAELAHFPKQVIEFAKKKASELEDYQNVSLQGSELEG 781
Query: 501 --QLFIHKFASLVKSGEKVDVEELQKALESVKSFESQTKKDLEDLPGGV 547
+ + K + + GE++ ++ L+ VK SQT KD +L G+
Sbjct: 782 QDEPAVKKRKVVREDGEQL----IESFLKEVKDLASQT-KDANELYAGI 825
>gi|345568246|gb|EGX51143.1| hypothetical protein AOL_s00054g519 [Arthrobotrys oligospora ATCC
24927]
Length = 926
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 54/179 (30%), Positives = 86/179 (48%), Gaps = 29/179 (16%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVA-FEYMSYIEDKR- 446
RGT T DG +A E + QI C +FATH+H + + E P V ++++ DK
Sbjct: 738 RGTSTYDGFGLAWAISEYIVKQIKCFAMFATHFHELTALVEEYPVVKNLHVVAHVGDKNG 797
Query: 447 NDG--IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME---ARHN--- 498
NDG + LYK+ G+C +SFG +VAEL P+ VV A ++E +H+
Sbjct: 798 NDGERKREVTLLYKVSEGVCDQSFGIHVAELVRFPQKVVNMAKRKADELEDFKGKHDRDA 857
Query: 499 ----------------LRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQTKKDLE 541
L++L I + +GEK++ E+ K ++ + E + K+ LE
Sbjct: 858 MNDRFSKEEVAEGSRLLKELLIEWKKKVESNGEKMEAAEMTKVMKGL--VEGEWKERLE 914
>gi|258542749|ref|YP_003188182.1| DNA mismatch repair protein MutS [Acetobacter pasteurianus IFO
3283-01]
gi|384042670|ref|YP_005481414.1| DNA mismatch repair protein MutS [Acetobacter pasteurianus IFO
3283-12]
gi|384051187|ref|YP_005478250.1| DNA mismatch repair protein MutS [Acetobacter pasteurianus IFO
3283-03]
gi|384054295|ref|YP_005487389.1| DNA mismatch repair protein MutS [Acetobacter pasteurianus IFO
3283-07]
gi|384057529|ref|YP_005490196.1| DNA mismatch repair protein MutS [Acetobacter pasteurianus IFO
3283-22]
gi|384060170|ref|YP_005499298.1| DNA mismatch repair protein MutS [Acetobacter pasteurianus IFO
3283-26]
gi|384063462|ref|YP_005484104.1| DNA mismatch repair protein MutS [Acetobacter pasteurianus IFO
3283-32]
gi|384119472|ref|YP_005502096.1| DNA mismatch repair protein MutS [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256633827|dbj|BAH99802.1| DNA mismatch repair protein MutS [Acetobacter pasteurianus IFO
3283-01]
gi|256636886|dbj|BAI02855.1| DNA mismatch repair protein MutS [Acetobacter pasteurianus IFO
3283-03]
gi|256639939|dbj|BAI05901.1| DNA mismatch repair protein MutS [Acetobacter pasteurianus IFO
3283-07]
gi|256642995|dbj|BAI08950.1| DNA mismatch repair protein MutS [Acetobacter pasteurianus IFO
3283-22]
gi|256646050|dbj|BAI11998.1| DNA mismatch repair protein MutS [Acetobacter pasteurianus IFO
3283-26]
gi|256649103|dbj|BAI15044.1| DNA mismatch repair protein MutS [Acetobacter pasteurianus IFO
3283-32]
gi|256652090|dbj|BAI18024.1| DNA mismatch repair protein MutS [Acetobacter pasteurianus IFO
3283-01-42C]
gi|256655147|dbj|BAI21074.1| DNA mismatch repair protein MutS [Acetobacter pasteurianus IFO
3283-12]
Length = 884
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA LE + C +FATH+H ++R + P ++ M+ E +
Sbjct: 719 RGTATLDGLAIAWAVLEALHSSVRCRAIFATHFHELSRLVDTLPRLSLHTMAVREWR--- 775
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
IVFL++++ G KS+G +VA LAG+P VV + ++E N
Sbjct: 776 --GQIVFLHEVLAGSAKKSWGVHVARLAGVPHAVVDRAGRLLRELERAEN 823
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
K TP M QW+T+K++N + +LFF++G FYELF
Sbjct: 7 KGATPAMAQWFTLKAENPEALLFFRMGDFYELF 39
>gi|222629796|gb|EEE61928.1| hypothetical protein OsJ_16670 [Oryza sativa Japonica Group]
Length = 2115
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 41/122 (33%), Positives = 62/122 (50%), Gaps = 17/122 (13%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLRE-EPNVAFEYMSYIEDKR- 446
RGT T+DG IA TL L + C+ +F THY + LRE E +V ++SY+ ++
Sbjct: 741 RGTSTHDGVAIAYATLHYLLKEKKCMVIFVTHYPKILNILREFEGSVGAYHVSYLATRKL 800
Query: 447 --------------NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQ 492
+ I FLYKLV G +SFG NVA LA +P ++ + +A +
Sbjct: 801 LEVADRQMVINNTETKDLGEITFLYKLVAGASDRSFGLNVALLAQLPSSCIERASVMAAK 860
Query: 493 ME 494
++
Sbjct: 861 LQ 862
>gi|45188042|ref|NP_984265.1| ADR168Cp [Ashbya gossypii ATCC 10895]
gi|74694200|sp|Q759V4.1|MSH3_ASHGO RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
gi|44982859|gb|AAS52089.1| ADR168Cp [Ashbya gossypii ATCC 10895]
Length = 1032
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/114 (38%), Positives = 64/114 (56%), Gaps = 10/114 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI--GC-LTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGTGT+DG I+ L F+++ C L +F THY S+ P + +MSYIE+KR
Sbjct: 879 RGTGTHDGISISYALLRYFIELHNACPLILFITHYASLGSI--RSPILGNYHMSYIEEKR 936
Query: 447 -NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV----KFGTTVAFQMEA 495
+ ++VFLYKL G S+G NVA+LA I ++ K T + +ME+
Sbjct: 937 PGENWPSVVFLYKLKEGRAHNSYGLNVAKLADIQTGIINRAYKISTMLKQEMES 990
>gi|366087626|ref|ZP_09454111.1| DNA mismatch repair protein MutS [Lactobacillus zeae KCTC 3804]
Length = 857
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 65/110 (59%), Gaps = 12/110 (10%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYH---SVARRLREEPNVAFEYMSYIEDK 445
RGT T DG +A+ +E + T+F+THYH S++ L + NV ++ +E+
Sbjct: 691 RGTATYDGMALAQAIIEYLHDHVHAKTLFSTHYHELTSLSDSLAKLKNV---HVGAVEEH 747
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
N +VFL+K++PG KS+G +VA+LAG+P D++ T+ Q+EA
Sbjct: 748 GN-----LVFLHKMMPGPADKSYGIHVAKLAGLPPDLLDRADTILQQLEA 792
Score = 48.9 bits (115), Expect = 0.008, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
TP M Q+ IK+Q D LF+++G FYELF+ DA+ GA L +
Sbjct: 8 TPMMQQYNAIKAQYPDAFLFYRIGDFYELFNDDAIKGAQLLELT 51
>gi|157876856|ref|XP_001686770.1| putative mismatch repair protein MSH8 [Leishmania major strain
Friedlin]
gi|68129845|emb|CAJ09151.1| putative mismatch repair protein MSH8 [Leishmania major strain
Friedlin]
Length = 1014
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 61/129 (47%), Gaps = 32/129 (24%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI---GCLTVFATHYHSVA----RRLREEPN------VAF 436
RGT T+DG IA TL LT+F+THYHS+A R P V
Sbjct: 860 RGTSTHDGMAIAYATLHALATAKPAAPLTIFSTHYHSLAMEQARTATPTPTGAHASAVQL 919
Query: 437 EYMSYI----------EDKRNDG---------IDTIVFLYKLVPGICPKSFGFNVAELAG 477
YM ++ +++ ND + +VFLY+LV GIC +S+G VA +AG
Sbjct: 920 GYMDFVLKSETAAAFADEETNDTRRSCAPGSCVSNVVFLYRLVRGICARSYGVEVAVMAG 979
Query: 478 IPEDVVKFG 486
IP +V+
Sbjct: 980 IPHTLVQLA 988
Score = 58.9 bits (141), Expect = 6e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P P T+ +P ++L Q+W IKS++++ V+FFK GKFYEL+ DAVI E
Sbjct: 25 PTAPPSTISIPHKYLDAMANMERQYWDIKSKHYNVVIFFKKGKFYELYDYDAVIANREFG 84
Query: 249 CSYMKESGCTGESTL 263
+ ++ G+ L
Sbjct: 85 LKMVLDTSNRGKMRL 99
>gi|448484950|ref|ZP_21606336.1| DNA mismatch repair protein MutS [Halorubrum arcis JCM 13916]
gi|445819292|gb|EMA69139.1| DNA mismatch repair protein MutS [Halorubrum arcis JCM 13916]
Length = 982
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IAR E FL ++G +FATHYH + E V + + R
Sbjct: 755 RGTATTDGRAIARAAAE-FLHDELGATALFATHYHGLTDLADERERV---FNLHFTATRE 810
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
DG + FL+++VPG S+G VAELAG+P VV
Sbjct: 811 DG--DVTFLHRVVPGASSSSYGVEVAELAGVPGPVV 844
>gi|242795788|ref|XP_002482664.1| DNA mismatch repair protein Msh3 [Talaromyces stipitatus ATCC 10500]
gi|218719252|gb|EED18672.1| DNA mismatch repair protein Msh3 [Talaromyces stipitatus ATCC 10500]
Length = 1113
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 39/116 (33%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFE--YMSYIEDKR 446
RGT T+DG IA+ L+ ++ I LT+F THY +++ + PN +M + E
Sbjct: 966 RGTSTHDGVAIAQAVLDYMVRSIRSLTLFITHYQNLSVMTKSFPNNELRNVHMRFTESGE 1025
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
G + I FLY++ G+ +S+G NVA LA +P V+ ++ ++E R R+L
Sbjct: 1026 PGGEEEITFLYEVGEGVAHRSYGLNVARLANLPPSVLDLAKLMSSELEERIKRRRL 1081
>gi|71747656|ref|XP_822883.1| mismatch repair protein MSH8 [Trypanosoma brucei brucei strain
927/4 GUTat10.1]
gi|70832551|gb|EAN78055.1| mismatch repair protein MSH8, putative [Trypanosoma brucei brucei
strain 927/4 GUTat10.1]
Length = 997
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/110 (39%), Positives = 56/110 (50%), Gaps = 16/110 (14%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ---IGCLTVFATHYHSVARR------------LREEPNV 434
RGT T+DG IA L + + L +F+THYH++A+ E V
Sbjct: 851 RGTSTHDGYTIAHAMLAAMKKRHPVPPLLLFSTHYHALAQEEHKSMQKSTSSAASETGGV 910
Query: 435 AFEYMSYIEDKRND-GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
YM + +D I TI FLY+LVPGIC +S+G VA LAGI VV
Sbjct: 911 QLGYMDFAVSAASDSNIPTITFLYRLVPGICARSYGVEVALLAGISPGVV 960
Score = 57.0 bits (136), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 27/78 (34%), Positives = 43/78 (55%), Gaps = 3/78 (3%)
Query: 186 PKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGAD 245
PK P P ++ +PP L+ Q+W +KS+++D V+FFK GKFYEL+ DA +
Sbjct: 26 PKRP---PSSITIPPRDLEAMAAMERQYWEVKSKHYDVVIFFKKGKFYELYDQDAAMAHR 82
Query: 246 ELACSYMKESGCTGESTL 263
E + ++ G+ L
Sbjct: 83 EFGLKLVVDTTNRGKMRL 100
>gi|328872398|gb|EGG20765.1| mutS like protein [Dictyostelium fasciculatum]
Length = 1237
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 63/107 (58%), Gaps = 9/107 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEP-NVAFEYMSYIEDKRN 447
RGT T+DG IA +L + Q+ C +F THY +++ P NV+ +MS++E+++N
Sbjct: 1074 RGTSTHDGVAIAYSSLLYIVEQLKCFCLFVTHYPLLSQIENMYPQNVSNYHMSFLEEQQN 1133
Query: 448 DGID-------TIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGT 487
+ + ++FLYK+V G S+G NVA LA +P+ V++ T
Sbjct: 1134 NPDNGQYQQQPKVIFLYKVVRGAAKNSYGINVATLANLPQPVIQSAT 1180
>gi|322785419|gb|EFZ12092.1| hypothetical protein SINV_12798 [Solenopsis invicta]
Length = 895
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/99 (37%), Positives = 57/99 (57%), Gaps = 8/99 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T +GC IA E + I +FATH+H + + E P V ++++ +ED
Sbjct: 723 RGTSTYEGCGIAWSIAEHLARDIKSYCLFATHFHEITKLAEEIPIVKNQHVTALVED--- 779
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
D + LY++ PGIC +SFG +VA++A P DV++F
Sbjct: 780 ---DKLTLLYQVKPGICDQSFGLHVAKMANFPLDVIEFA 815
>gi|448425960|ref|ZP_21583068.1| DNA mismatch repair protein MutS [Halorubrum terrestre JCM 10247]
gi|445679921|gb|ELZ32374.1| DNA mismatch repair protein MutS [Halorubrum terrestre JCM 10247]
Length = 978
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IAR E FL ++G +FATHYH + E V + + R
Sbjct: 755 RGTATTDGRAIARAAAE-FLHDELGATALFATHYHGLTDLADERERV---FNLHFTATRE 810
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
DG + FL+++VPG S+G VAELAG+P VV
Sbjct: 811 DG--DVTFLHRVVPGASSSSYGVEVAELAGVPGPVV 844
>gi|364506056|pdb|3THW|B Chain B, Human Mutsbeta Complexed With An Idl Of 4 Bases (Loop4)
And Adp
gi|364506059|pdb|3THX|B Chain B, Human Mutsbeta Complexed With An Idl Of 3 Bases (Loop3)
And Adp
gi|364506063|pdb|3THY|B Chain B, Human Mutsbeta Complexed With An Idl Of 2 Bases (Loop2)
And Adp
gi|364506067|pdb|3THZ|B Chain B, Human Mutsbeta Complexed With An Idl Of 6 Bases (Loop6)
And Adp
Length = 918
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 82/158 (51%), Gaps = 14/158 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPN-VAFEYMSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + + V +M ++ E
Sbjct: 763 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDE 822
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K + G D + FLY++ GI +S+G NVA+LA +P +++K + ++E N
Sbjct: 823 SKLDPGAAEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAAHKSKELEGLIN 882
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQT 536
++ + FA L + ++LQK E E+QT
Sbjct: 883 TKRKRLKYFAKLWTMH---NAQDLQKWTEEFNMEETQT 917
>gi|398024318|ref|XP_003865320.1| mismatch repair protein MSH8, putative [Leishmania donovani]
gi|322503557|emb|CBZ38643.1| mismatch repair protein MSH8, putative [Leishmania donovani]
Length = 1014
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 32/129 (24%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI---GCLTVFATHYHSVA----RRLREEPN------VAF 436
RGT T+DG IA TL LT+F+THYH++A R P V
Sbjct: 860 RGTSTHDGMAIAHATLHALTTAKPAAPLTIFSTHYHALAIEQARTATTTPTGAHARAVQL 919
Query: 437 EYMSYI----------EDKRNDG---------IDTIVFLYKLVPGICPKSFGFNVAELAG 477
YM ++ +++ ND + +VFLY+LV GIC +S+G VA +AG
Sbjct: 920 GYMDFVLKFETAAAFADEEANDRSRSFAPGSCVSNVVFLYRLVRGICARSYGVEVAVMAG 979
Query: 478 IPEDVVKFG 486
IP +V+
Sbjct: 980 IPNTLVQLA 988
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P P T+ +P ++L Q+W IKS++++ V+FFK GKFYEL+ DAVI E
Sbjct: 25 PTAPPSTISIPHKYLDAMANMERQYWDIKSKHYNVVIFFKKGKFYELYDYDAVIANREFG 84
Query: 249 CSYMKESGCTGESTL 263
+ ++ G+ L
Sbjct: 85 LKMVLDTSNRGKMRL 99
>gi|313884208|ref|ZP_07817974.1| DNA mismatch repair protein MutS [Eremococcus coleocola
ACS-139-V-Col8]
gi|312620655|gb|EFR32078.1| DNA mismatch repair protein MutS [Eremococcus coleocola
ACS-139-V-Col8]
Length = 866
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 35/108 (32%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A+ +E ++ LT+F+THYH + E N+ ++ E
Sbjct: 695 RGTATYDGMALAQGIIEYIADKVRALTIFSTHYHELTNLATESSNIRNIHVGASEKN--- 751
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
++FL+K+ G KS+G +VA LAG+PE +++ + F++EA+
Sbjct: 752 --GELIFLHKIFDGPADKSYGIHVARLAGLPESLIQNSQAILFRLEAK 797
Score = 44.3 bits (103), Expect = 0.18, Method: Compositional matrix adjust.
Identities = 17/37 (45%), Positives = 27/37 (72%)
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAV 241
K+TP M Q+ +K + DC +FF++G FYE+F+ DA+
Sbjct: 5 KKTPMMEQYDAVKERYPDCFIFFRLGDFYEMFNEDAL 41
>gi|374813461|ref|ZP_09717198.1| DNA mismatch repair protein MutS [Treponema primitia ZAS-1]
Length = 906
Score = 68.2 bits (165), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/95 (44%), Positives = 56/95 (58%), Gaps = 8/95 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGTGTNDG IA E+ L +I C T+FATHYH ++ + P +A M ++ D
Sbjct: 709 RGTGTNDGLSIAWAVSEELLNRIKCRTLFATHYHELS--MLAHPGLANRSMEVLD---RD 763
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
G IVFL KL G +S+G +VA LAG+ E V+
Sbjct: 764 G--EIVFLRKLKEGPAAESYGLHVARLAGLSEGVL 796
>gi|240281683|gb|EER45186.1| DNA mismatch repair protein [Ajellomyces capsulatus H143]
Length = 519
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 42/113 (37%), Positives = 54/113 (47%), Gaps = 4/113 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT + DG +A+ L IG L FATHYHS+A P +A M D+
Sbjct: 357 RGTSSYDGVAVAQAVLHHVATHIGALGFFATHYHSLASEFEGHPEIAPRRMRIHVDEEER 416
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+ FLYKL GI SFG + A + GIP VV+ A Q E L++
Sbjct: 417 ---RVTFLYKLEEGIAEGSFGMHCASMCGIPNKVVERAEIAAKQWEHTSRLKE 466
Score = 56.6 bits (135), Expect = 3e-05, Method: Compositional matrix adjust.
Identities = 36/112 (32%), Positives = 57/112 (50%), Gaps = 3/112 (2%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYLRTQCAH 338
PD+S L+Y++ AFD +A + ++P+AGV++++D D I IE ++ L+
Sbjct: 55 MPDLSGYLQYWKTAFDRTKAKDSSILVPEAGVEEDFDASHDRISEIESDLDRLLKEVRKK 114
Query: 339 FGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVTPECR 390
G I K+ Y LEVP K + K Q ATK+ + + PE R
Sbjct: 115 LGSNAIVYRDNGKE-IYQLEVPIKIKNVPKDWDQMSATKQ--AKRFYFPELR 163
>gi|146104291|ref|XP_001469786.1| putative mismatch repair protein MSH8 [Leishmania infantum JPCM5]
gi|134074156|emb|CAM72898.1| putative mismatch repair protein MSH8 [Leishmania infantum JPCM5]
Length = 1014
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/129 (33%), Positives = 61/129 (47%), Gaps = 32/129 (24%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI---GCLTVFATHYHSVA----RRLREEPN------VAF 436
RGT T+DG IA TL LT+F+THYH++A R P V
Sbjct: 860 RGTSTHDGMAIAHATLHALTTAKPAAPLTIFSTHYHALAIEQARTATTTPTGAHARAVQL 919
Query: 437 EYMSYI----------EDKRNDG---------IDTIVFLYKLVPGICPKSFGFNVAELAG 477
YM ++ +++ ND + +VFLY+LV GIC +S+G VA +AG
Sbjct: 920 GYMDFVLKFETAAAFADEEANDRSRSFAPGSCVSNVVFLYRLVRGICARSYGVEVAVMAG 979
Query: 478 IPEDVVKFG 486
IP +V+
Sbjct: 980 IPNTLVQLA 988
Score = 58.9 bits (141), Expect = 7e-06, Method: Compositional matrix adjust.
Identities = 27/75 (36%), Positives = 42/75 (56%)
Query: 189 PDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELA 248
P P T+ +P ++L Q+W IKS++++ V+FFK GKFYEL+ DAVI E
Sbjct: 25 PTAPPSTISIPHKYLDAMANMERQYWDIKSKHYNVVIFFKKGKFYELYDYDAVIANREFG 84
Query: 249 CSYMKESGCTGESTL 263
+ ++ G+ L
Sbjct: 85 LKMVLDTSNRGKMRL 99
>gi|365830823|ref|ZP_09372386.1| DNA mismatch repair protein MutS [Coprobacillus sp. 3_3_56FAA]
gi|374627242|ref|ZP_09699649.1| DNA mismatch repair protein MutS [Coprobacillus sp. 8_2_54BFAA]
gi|365262833|gb|EHM92705.1| DNA mismatch repair protein MutS [Coprobacillus sp. 3_3_56FAA]
gi|373913265|gb|EHQ45103.1| DNA mismatch repair protein MutS [Coprobacillus sp. 8_2_54BFAA]
Length = 836
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA+ +E +I C+T+F+THYH + EE N+ + + ND
Sbjct: 682 RGTATFDGMAIAQAMIEYIAAKIKCITLFSTHYHELT--FLEEKNLGIKNVHASASIEND 739
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
+ VFLY++ PG KS+G NVA+LA +P+ V+
Sbjct: 740 DL---VFLYRIKPGRSNKSYGVNVAKLAKLPDAVL 771
Score = 46.2 bits (108), Expect = 0.045, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
K +P M Q+ +IK +N D ++ F++G FYE+F DA++ + EL +
Sbjct: 4 KYSPMMMQYLSIKEENQDSIVMFRLGDFYEMFFDDAIMVSKELEIA 49
>gi|399216563|emb|CCF73250.1| unnamed protein product [Babesia microti strain RI]
Length = 1197
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 31/80 (38%), Positives = 47/80 (58%), Gaps = 8/80 (10%)
Query: 172 FLHPDHILDADRRSPKHPDYNPKTLYVPPEFLK--------KQTPCMGQWWTIKSQNFDC 223
++ P I D+ R P YNP T+ +PP K TP M Q+W+IK+ +FD
Sbjct: 278 WIQPQFIKDSSGRRPDCTSYNPSTMLIPPPTHKWINEYRNVHYTPTMKQYWSIKATHFDK 337
Query: 224 VLFFKVGKFYELFHMDAVIG 243
++ FK+G+FYE+F++DA I
Sbjct: 338 LVLFKMGRFYEIFYIDACIA 357
Score = 63.2 bits (152), Expect = 4e-07, Method: Compositional matrix adjust.
Identities = 36/110 (32%), Positives = 57/110 (51%), Gaps = 6/110 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA +L ++ C +F+THYH + + +++ +M+ +
Sbjct: 1060 RGTSTFDGMAIASSSLIYIANKLACRCIFSTHYHLICNEAKLVDSISLYHMA-----SSI 1114
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
+ FL+K G C KS G ++A+LAGIPE V+ +A ME + N
Sbjct: 1115 MSGDVKFLFKFTKGQCLKSQGLHIAKLAGIPECVLSVAQNIAESMEIKVN 1164
>gi|421853163|ref|ZP_16285842.1| DNA mismatch repair protein MutS [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
gi|371478623|dbj|GAB31045.1| DNA mismatch repair protein MutS [Acetobacter pasteurianus subsp.
pasteurianus LMG 1262 = NBRC 106471]
Length = 892
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA LE + C +FATH+H ++R + P ++ M+ E +
Sbjct: 727 RGTATLDGLAIAWAVLEALHSSVRCRAIFATHFHELSRLVDTLPRLSLHTMAVREWR--- 783
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
IVFL++++ G KS+G +VA LAG+P VV + ++E N
Sbjct: 784 --GQIVFLHEVLAGSAKKSWGVHVARLAGVPHAVVDRAGRLLRELERAEN 831
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
K TP M QW+T+K++N + +LFF++G FYELF
Sbjct: 15 KGATPAMAQWFTLKAENPEALLFFRMGDFYELF 47
>gi|339627924|ref|YP_004719567.1| DNA mismatch repair protein MutS [Sulfobacillus acidophilus TPY]
gi|379007557|ref|YP_005257008.1| DNA mismatch repair protein MutS [Sulfobacillus acidophilus DSM
10332]
gi|339285713|gb|AEJ39824.1| DNA mismatch repair protein MutS [Sulfobacillus acidophilus TPY]
gi|361053819|gb|AEW05336.1| DNA mismatch repair protein MutS [Sulfobacillus acidophilus DSM
10332]
Length = 842
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 33/109 (30%), Positives = 59/109 (54%), Gaps = 6/109 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI-GCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A +E+ G +T+FATHYH + + P++ + +E R
Sbjct: 686 RGTSTYDGMALALAVMERLATADGPITLFATHYHELTDLAEQHPHMTNLTVEVVETARQP 745
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARH 497
+F ++++PG +S+G +VA++AG+P V+ ++E+RH
Sbjct: 746 -----IFTHRVIPGRASRSYGIHVAQMAGLPPTVIARAKAYLKELESRH 789
Score = 42.4 bits (98), Expect = 0.60, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 29/52 (55%)
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESG 256
K TP + Q++ +K++ D +L F++G FYELF DA + A L G
Sbjct: 6 KTTPMLDQYYRLKAEQPDALLLFRLGDFYELFGPDAELAAPLLDLQLTSRDG 57
>gi|237733849|ref|ZP_04564330.1| DNA mismatch repair protein mutS [Mollicutes bacterium D7]
gi|229383187|gb|EEO33278.1| DNA mismatch repair protein mutS [Coprobacillus sp. D7]
Length = 837
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA+ +E +I C+T+F+THYH + EE N+ + + ND
Sbjct: 683 RGTATFDGMAIAQAMIEYIAAKIKCITLFSTHYHELT--FLEEKNLGIKNVHASASIEND 740
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
+ VFLY++ PG KS+G NVA+LA +P+ V+
Sbjct: 741 DL---VFLYRIKPGRSNKSYGVNVAKLAKLPDAVL 772
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
K +P M Q+ +IK +N D ++ F++G FYE+F DA++ + EL +
Sbjct: 5 KYSPMMMQYLSIKEENQDSIVMFRLGDFYEMFFDDAIMVSKELEIA 50
>gi|448508042|ref|ZP_21615276.1| DNA mismatch repair protein MutS [Halorubrum distributum JCM 9100]
gi|448518492|ref|ZP_21617569.1| DNA mismatch repair protein MutS [Halorubrum distributum JCM 10118]
gi|445697619|gb|ELZ49679.1| DNA mismatch repair protein MutS [Halorubrum distributum JCM 9100]
gi|445705073|gb|ELZ56977.1| DNA mismatch repair protein MutS [Halorubrum distributum JCM 10118]
Length = 978
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IAR E FL ++G +FATHYH + E V + + R
Sbjct: 755 RGTATTDGRAIARAAAE-FLHDELGATALFATHYHGLTDLADERERV---FNLHFTATRE 810
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
DG + FL+++VPG S+G VAELAG+P VV
Sbjct: 811 DG--DVTFLHRVVPGASSSSYGVEVAELAGVPGPVV 844
>gi|256996831|dbj|BAI22706.1| DNA mismatch repair protein [Acetobacter pasteurianus]
Length = 884
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA LE + C +FATH+H ++R + P ++ M+ E +
Sbjct: 719 RGTATLDGLAIAWAVLEALHSSVRCRAIFATHFHELSRLVDTLPRLSLHTMAVREWR--- 775
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
IVFL++++ G KS+G +VA LAG+P VV + ++E N
Sbjct: 776 --GQIVFLHEVLAGSAKKSWGVHVARLAGVPHAVVDRAGRLLRELERAEN 823
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
K TP M QW+T+K++N + +LFF++G FYELF
Sbjct: 7 KGATPAMAQWFTLKAENPEALLFFRMGDFYELF 39
>gi|388543737|ref|ZP_10147027.1| DNA mismatch repair protein MutS [Pseudomonas sp. M47T1]
gi|388278294|gb|EIK97866.1| DNA mismatch repair protein MutS [Pseudomonas sp. M47T1]
Length = 855
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/94 (39%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG +A E+ Q+ T+FATHY + EP VA ++S E K
Sbjct: 696 RGTSTFDGLSLAWAAAERLAQLKAYTLFATHYFELTVLPENEPLVANVHLSATEHK---- 751
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
+ IVFL+ ++PG +S+G VA+LAG+P V+
Sbjct: 752 -ERIVFLHHVLPGPASQSYGLAVAQLAGVPNAVI 784
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/60 (35%), Positives = 34/60 (56%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGEST 262
L TP M Q+W +K+Q+ D ++F+++G FYE+F+ DA A L + G+S
Sbjct: 4 LSSHTPMMQQYWKLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQSI 63
>gi|167754512|ref|ZP_02426639.1| hypothetical protein CLORAM_00013 [Clostridium ramosum DSM 1402]
gi|167705344|gb|EDS19923.1| DNA mismatch repair protein MutS [Clostridium ramosum DSM 1402]
Length = 836
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/95 (40%), Positives = 56/95 (58%), Gaps = 6/95 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA+ +E +I C+T+F+THYH + EE N+ + + ND
Sbjct: 682 RGTATFDGMAIAQAMIEYIAAKIKCITLFSTHYHELT--FLEEKNLGIKNVHASASIEND 739
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
+ VFLY++ PG KS+G NVA+LA +P+ V+
Sbjct: 740 DL---VFLYRIKPGRSNKSYGVNVAKLAKLPDAVL 771
Score = 46.2 bits (108), Expect = 0.046, Method: Compositional matrix adjust.
Identities = 18/46 (39%), Positives = 31/46 (67%)
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
K +P M Q+ +IK +N D ++ F++G FYE+F DA++ + EL +
Sbjct: 4 KYSPMMMQYLSIKEENQDSIVMFRLGDFYEMFFDDAIMVSKELEIA 49
>gi|71064824|ref|YP_263551.1| DNA mismatch repair protein MutS [Psychrobacter arcticus 273-4]
gi|90109854|sp|Q4FV41.1|MUTS_PSYA2 RecName: Full=DNA mismatch repair protein MutS
gi|71037809|gb|AAZ18117.1| DNA mismatch repair protein MutS [Psychrobacter arcticus 273-4]
Length = 1058
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 54/101 (53%), Gaps = 9/101 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEP------NVAFEYMSYIE 443
RGT T DG IA + + L+IGCLT+FATHY + +L + P N ++
Sbjct: 850 RGTATTDGLAIAHACVNRLLEIGCLTLFATHYFELT-KLAQNPKESSGSNDKLIRNVHVA 908
Query: 444 DKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
DG ++ L+++ G SFG +VA++AGIP V+
Sbjct: 909 ASEVDG--QLLLLHQIKEGAASSSFGLHVAKMAGIPTQVLN 947
>gi|448082468|ref|XP_004195147.1| Piso0_005692 [Millerozyma farinosa CBS 7064]
gi|359376569|emb|CCE87151.1| Piso0_005692 [Millerozyma farinosa CBS 7064]
Length = 1245
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 75/254 (29%), Positives = 114/254 (44%), Gaps = 19/254 (7%)
Query: 8 SPEKKGDSESSTPASSKGKKTSKSPAKSEDDSPVTKRPRRKS-AKRVKSAIQSDSEPDDM 66
S EK+ +ESS S+G +T KS S DS + S A++ + ++SD + D+
Sbjct: 137 SAEKRAGAESS---KSRGLRTRKSQPVSYADSDSDQEGESVSGARKRRRIVESDDDSDEF 193
Query: 67 L-QDNGSEDE-----YVPPKAEVESESEHSSGEEELEESVEDPTPSSSEAEVTPMKNGNK 120
+ QD +E E +V +VES+SE + E ++ SS + + +
Sbjct: 194 MPQDENAESEDDMSDFVVDDEDVESQSEPEEESDY--EDIKKIKKSSGNGKSARSSSSST 251
Query: 121 RGLSSKSGQPTKKP-------KLTAPSTPSTPSFPVSDTSETTPSTSGAQDWSHNHYQFL 173
S+ KK K TA S+ S S P +TS N ++
Sbjct: 252 SPNVSEKPNSAKKTPNKDLAEKFTANSSYSVDSKPEVSRKPVPVATSKKSFTKENEERYQ 311
Query: 174 HPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFY 233
+I DA +R P+Y+ +TLY+P T Q+W IK + +D V+FFK GKFY
Sbjct: 312 WLVNIKDAQKRPADDPEYDSRTLYIPQSAWSSFTAFEKQYWEIKCKMWDTVVFFKKGKFY 371
Query: 234 ELFHMDAVIGADEL 247
EL+ DA I E
Sbjct: 372 ELYENDAEIANTEF 385
Score = 64.3 bits (155), Expect = 2e-07, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 55/115 (47%), Gaps = 8/115 (6%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI--EDKR 446
RG ++DG IA L I L FATH+ S+ R P + M + E+ R
Sbjct: 1080 RGGSSSDGFSIAEAVLHHIATHIQSLGFFATHFGSLGLSFRNHPQIRPMRMGILVDENTR 1139
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
N I FLYKL G P SFG NVA + GI E++V A + E + +++
Sbjct: 1140 N-----ITFLYKLEEGTAPGSFGMNVAAMCGIAEEIVSNAERAAEEYEKQSRIKR 1189
Score = 55.5 bits (132), Expect = 9e-05, Method: Compositional matrix adjust.
Identities = 41/125 (32%), Positives = 67/125 (53%), Gaps = 10/125 (8%)
Query: 267 LCNYESQTPSGCFPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEK 326
L +Y S P ++ + ++E+AFD EA S NI+P GVD E+D + + S+E
Sbjct: 772 LYSYISNIP----KELETCISHWEDAFDRTEALS-DNIVPMKGVDSEFDNSSEALASLEA 826
Query: 327 EIQTYLRTQCAHFGCTVI-YSEAQKKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYV 385
+++ +LRT F I Y ++ K+ Y++EVP+K + Q +T K V+ Y
Sbjct: 827 QLEEHLRTYRKEFKSNEICYKDSGKEV--YLIEVPNKIKNIPHDWQQMGSTSK--VKRYW 882
Query: 386 TPECR 390
+PE R
Sbjct: 883 SPEVR 887
>gi|260902365|ref|ZP_05910760.1| DNA mismatch repair protein MutS [Vibrio parahaemolyticus AQ4037]
gi|308110566|gb|EFO48106.1| DNA mismatch repair protein MutS [Vibrio parahaemolyticus AQ4037]
Length = 319
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 53/177 (29%), Positives = 78/177 (44%), Gaps = 16/177 (9%)
Query: 329 QTYLRTQCAHFGCTVIYSEAQ--KKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVT 386
QT L AH G V AQ + + S + +S T+ N+ + T
Sbjct: 91 QTALIALMAHIGSYVPAESAQIGSLDRIFTRIGASDDLASGRSTFMVEMTETANILHNAT 150
Query: 387 PEC--------RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFE 437
RGT T DG +A + E QIG +T+FATHY + PN+A
Sbjct: 151 KNSLVLMDEIGRGTSTYDGLSLAWASAEWLATQIGAMTLFATHYFELTELPNLLPNLANV 210
Query: 438 YMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++ +E D+I F++ + G KS+G VA LAG+P+ V+K T Q+E
Sbjct: 211 HLDAVEHG-----DSIAFMHAVQEGAASKSYGLAVAGLAGVPKTVIKNARTKLSQLE 262
>gi|258543981|ref|ZP_05704215.1| DNA mismatch repair protein MutS [Cardiobacterium hominis ATCC
15826]
gi|258520759|gb|EEV89618.1| DNA mismatch repair protein MutS [Cardiobacterium hominis ATCC
15826]
Length = 862
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 37/110 (33%), Positives = 55/110 (50%), Gaps = 6/110 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGTGT DG +A E+ Q LT+FATHY + N+ +++ +E
Sbjct: 696 RGTGTYDGLSLAWAAAERLASQNHALTLFATHYFELTELAETHKNIKNIHLAAVEHH--- 752
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
D I+F++ + G KS+G VA LAG+P D + T Q+E R +
Sbjct: 753 --DNIIFMHHVEEGAASKSYGLQVARLAGVPVDTIHAATAKLRQLETRRD 800
>gi|421849577|ref|ZP_16282555.1| DNA mismatch repair protein MutS [Acetobacter pasteurianus NBRC
101655]
gi|371459638|dbj|GAB27758.1| DNA mismatch repair protein MutS [Acetobacter pasteurianus NBRC
101655]
Length = 892
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 38/110 (34%), Positives = 58/110 (52%), Gaps = 6/110 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA LE + C +FATH+H ++R + P ++ M+ E +
Sbjct: 727 RGTATLDGLAIAWAVLEALHSSVRCRAIFATHFHELSRLVDTLPRLSLHTMAVREWR--- 783
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
IVFL++++ G KS+G +VA LAG+P VV + ++E N
Sbjct: 784 --GQIVFLHEVLAGSAKKSWGVHVARLAGVPHAVVDRAGRLLRELERAEN 831
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 18/33 (54%), Positives = 26/33 (78%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELF 236
K TP M QW+T+K++N + +LFF++G FYELF
Sbjct: 15 KGATPAMAQWFTLKAENPEALLFFRMGDFYELF 47
>gi|315259983|gb|ADT92190.1| DNA mismatch repair protein [Zea mays]
Length = 981
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 43/122 (35%), Positives = 64/122 (52%), Gaps = 18/122 (14%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLRE-EPNVAFEYMSYIEDKR- 446
RGT T+DG IA TL L + C+ +F THY + RE E +V ++SY+ ++
Sbjct: 782 RGTSTHDGVAIAYSTLHYLLKEKKCIVIFVTHYPKILDIQREFEGSVGAYHVSYLATRKL 841
Query: 447 --------------NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQ 492
ND + I+FLYKLV G +SFG NVA LA +P +K + +A +
Sbjct: 842 LEVTDKQVETSPEAND-LGEIIFLYKLVAGASDRSFGLNVALLAQLPSRCIKRASVMAAK 900
Query: 493 ME 494
++
Sbjct: 901 LQ 902
>gi|448437428|ref|ZP_21587451.1| DNA mismatch repair protein MutS [Halorubrum tebenquichense DSM
14210]
gi|445681155|gb|ELZ33594.1| DNA mismatch repair protein MutS [Halorubrum tebenquichense DSM
14210]
Length = 947
Score = 67.8 bits (164), Expect = 1e-08, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IAR E FL ++G +FATHYH + E V + + R
Sbjct: 730 RGTATTDGRAIARAAAE-FLHDELGATALFATHYHELTDLADERERV---FNLHFTATRE 785
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
DG + FL+++VPG S+G VAELAG+P VV
Sbjct: 786 DG--DVTFLHRIVPGASSSSYGVEVAELAGVPGPVV 819
>gi|325859897|ref|ZP_08173027.1| DNA mismatch repair protein MutS [Prevotella denticola CRIS 18C-A]
gi|325482823|gb|EGC85826.1| DNA mismatch repair protein MutS [Prevotella denticola CRIS 18C-A]
Length = 887
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 79/179 (44%), Gaps = 18/179 (10%)
Query: 329 QTYLRTQCAHFGCTVIYSEAQKKQ--KKYVLEVPSKYASKAKSNHQRVATKKKNVENYVT 386
QT L A GC V A+ K + S S +S T+ N+ N VT
Sbjct: 644 QTALIVLLAQIGCFVPAERARIGMVDKIFTRVGASDNISLGESTFMVEMTEASNILNNVT 703
Query: 387 PEC--------RGTGTNDGCVIARVTLEKFLQ---IGCLTVFATHYHSVARRLREEPNVA 435
P RGT T DG IA +E + + T+FATHYH + + P +
Sbjct: 704 PRSLVLFDELGRGTSTYDGISIAWAIVEYLHEHPRVQARTLFATHYHELNEMEKSFPRIR 763
Query: 436 FEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+S K DG I+FL KL PG SFG +VAE+AG+P +VK + ++E
Sbjct: 764 NFNVSV---KEVDG--KIIFLRKLEPGGSEHSFGIHVAEIAGMPRSIVKRANVILKELE 817
>gi|452980203|gb|EME79964.1| hypothetical protein MYCFIDRAFT_204401 [Pseudocercospora fijiensis
CIRAD86]
Length = 1143
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 37/98 (37%), Positives = 58/98 (59%), Gaps = 7/98 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFE--YMSYIEDKR 446
RGT T+DG IA+ L+ ++ CLT+F THY ++AR PN +M + E
Sbjct: 1002 RGTSTHDGVAIAQSVLQHVVEEKKCLTLFITHYQTLARLADSFPNHELRNVHMKFTE--- 1058
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
+G + I FLY++ G+ +S+G NVA LAG+P +++
Sbjct: 1059 REGAE-ITFLYEVGEGVAHRSYGLNVARLAGLPRSLLE 1095
>gi|374301359|ref|YP_005052998.1| DNA mismatch repair protein mutS [Desulfovibrio africanus str.
Walvis Bay]
gi|332554295|gb|EGJ51339.1| DNA mismatch repair protein mutS [Desulfovibrio africanus str.
Walvis Bay]
Length = 884
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/108 (37%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIG---CLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG +A +E+F + G T+FATHYH + P V Y I++ +
Sbjct: 707 RGTSTFDGLALAWAVVEEFARRGKGAIRTLFATHYHELTALEGRIPGVR-NYTVAIKEWK 765
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
D I+FL +LVPG +S+G VA LAG+P+ VV+ + ++E
Sbjct: 766 GD----IIFLRRLVPGPSDRSYGIEVARLAGVPDSVVRRAREILSELE 809
Score = 42.7 bits (99), Expect = 0.48, Method: Compositional matrix adjust.
Identities = 20/46 (43%), Positives = 28/46 (60%)
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
K TP Q+ IK + D +LF+++G FYE+F DA I A EL +
Sbjct: 6 KLTPMFEQYLGIKQEYPDALLFYRMGDFYEVFFEDAQIAARELQIA 51
>gi|327312778|ref|YP_004328215.1| DNA mismatch repair protein MutS [Prevotella denticola F0289]
gi|326945312|gb|AEA21197.1| DNA mismatch repair protein MutS [Prevotella denticola F0289]
Length = 887
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 58/179 (32%), Positives = 79/179 (44%), Gaps = 18/179 (10%)
Query: 329 QTYLRTQCAHFGCTVIYSEAQKKQ--KKYVLEVPSKYASKAKSNHQRVATKKKNVENYVT 386
QT L A GC V A+ K + S S +S T+ N+ N VT
Sbjct: 644 QTALIVLLAQIGCFVPAERARIGMVDKIFTRVGASDNISLGESTFMVEMTEASNILNNVT 703
Query: 387 PEC--------RGTGTNDGCVIARVTLEKFLQ---IGCLTVFATHYHSVARRLREEPNVA 435
P RGT T DG IA +E + + T+FATHYH + + P +
Sbjct: 704 PRSLVLFDELGRGTSTYDGISIAWAIVEYLHEHPRVQARTLFATHYHELNEMEKSFPRIR 763
Query: 436 FEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+S K DG I+FL KL PG SFG +VAE+AG+P +VK + ++E
Sbjct: 764 NFNVSV---KEVDG--KIIFLRKLEPGGSEHSFGIHVAEIAGMPRSIVKRANVILKELE 817
>gi|358385712|gb|EHK23308.1| hypothetical protein TRIVIDRAFT_36626 [Trichoderma virens Gv29-8]
Length = 925
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A E + +IGC +FATH+H + + P V +++ N
Sbjct: 745 RGTSTYDGFGLAWAISEHIVKEIGCFAMFATHFHELTALADQYPQVKNMHVTAHISGTNG 804
Query: 449 GIDT---IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++ + LYK+ PGIC +SFG +VAEL P+ VV+ A ++E
Sbjct: 805 DVNAKREVTLLYKVEPGICDQSFGIHVAELVRFPDKVVRMAKRKADELE 853
>gi|164656521|ref|XP_001729388.1| hypothetical protein MGL_3423 [Malassezia globosa CBS 7966]
gi|159103279|gb|EDP42174.1| hypothetical protein MGL_3423 [Malassezia globosa CBS 7966]
Length = 799
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 48/147 (32%), Positives = 74/147 (50%), Gaps = 12/147 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLT---VFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG +A L FL+ G +F THY + R P ++ R
Sbjct: 657 RGTSTFDGMALAYAVLRSFLERGPAMPTLLFITHYVPLTRLAHLFPQQLMNVHMQVQIMR 716
Query: 447 NDGI-DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIH 505
+ G D +VFL++++PG +SFG + A L+GIP +++ + A ++E L IH
Sbjct: 717 HQGKEDEVVFLHRVLPGAASRSFGIHAAALSGIPTTIIERAKSKALELEEAERL----IH 772
Query: 506 KFASLVKSGEKVDVEELQKALESVKSF 532
+A +VK + D E ALES++S
Sbjct: 773 -YAHVVKLLGQGDAE---AALESIQSI 795
>gi|93005104|ref|YP_579541.1| DNA mismatch repair protein MutS [Psychrobacter cryohalolentis K5]
gi|122416020|sp|Q1QE46.1|MUTS_PSYCK RecName: Full=DNA mismatch repair protein MutS
gi|92392782|gb|ABE74057.1| DNA mismatch repair protein MutS [Psychrobacter cryohalolentis K5]
Length = 1040
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/101 (35%), Positives = 55/101 (54%), Gaps = 9/101 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEP------NVAFEYMSYIE 443
RGT T DG IA + + ++IGCLT+FATHY + +L + P N F ++
Sbjct: 842 RGTATTDGLAIAHACVNRLVEIGCLTLFATHYFELT-KLAQNPKESSGSNDKFIRNVHVA 900
Query: 444 DKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
DG ++ L+++ G SFG +VA++AGIP V+
Sbjct: 901 ASEIDG--QLLLLHQIKDGAASSSFGLHVAKMAGIPIQVLN 939
>gi|452840462|gb|EME42400.1| hypothetical protein DOTSEDRAFT_54773 [Dothistroma septosporum
NZE10]
Length = 923
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/194 (32%), Positives = 88/194 (45%), Gaps = 32/194 (16%)
Query: 330 TYLR-----TQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAK------------SNHQ 372
TY+R A GC V SEA+ +L S+ K SN
Sbjct: 661 TYIRQIGVIALMAQIGCFVPCSEAELTLFDCILARVGASDSQLKGVSTFMAEMLETSNIL 720
Query: 373 RVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYH---SVARRL 428
+ ATK+ V + RGT T DG +A E + +IGC ++FATH+H S+
Sbjct: 721 KTATKESLV--IIDELGRGTSTYDGFGLAYAISEHIIKEIGCYSMFATHFHELTSLVATY 778
Query: 429 REEPNV-AFEYMSYIEDKRNDGIDT-------IVFLYKLVPGICPKSFGFNVAELAGIPE 480
R+ N+ +M ED DG D+ + LYK+VPGI +SFG +VAEL P+
Sbjct: 779 RQVQNLHVVAHMGDGEDSVMDG-DSHTSRRREVTLLYKVVPGISDQSFGIHVAELVRFPQ 837
Query: 481 DVVKFGTTVAFQME 494
VV A ++E
Sbjct: 838 KVVNMAKRKADELE 851
>gi|327352357|gb|EGE81214.1| DNA mismatch repair protein Msh3 [Ajellomyces dermatitidis ATCC
18188]
Length = 1162
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 7/132 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFE--YMSYIEDKR 446
RGT T+DG IA+ L+ ++ + LT+F THY +++ RE P +M + E
Sbjct: 1014 RGTSTHDGVAIAQAVLDYMVRNLRSLTLFITHYQNLSSLAREFPKGELRNVHMKFTESGM 1073
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
DG D I FLY++ G+ +S+G NVA LA +P V+ T + ++E + ++L
Sbjct: 1074 -DGRD-ITFLYEVGEGVAHRSYGLNVARLAHVPTSVLDVARTKSAELEEKIRKKKLL--A 1129
Query: 507 FASLVKSGEKVD 518
A +VK D
Sbjct: 1130 LAKVVKGAIDTD 1141
>gi|239614918|gb|EEQ91905.1| DNA mismatch repair protein Msh3 [Ajellomyces dermatitidis ER-3]
Length = 1162
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 7/132 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFE--YMSYIEDKR 446
RGT T+DG IA+ L+ ++ + LT+F THY +++ RE P +M + E
Sbjct: 1014 RGTSTHDGVAIAQAVLDYMVRNLRSLTLFITHYQNLSSLAREFPKGELRNVHMKFTESGM 1073
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
DG D I FLY++ G+ +S+G NVA LA +P V+ T + ++E + ++L
Sbjct: 1074 -DGRD-ITFLYEVGEGVAHRSYGLNVARLAHVPTSVLDVARTKSAELEEKIRKKKLL--A 1129
Query: 507 FASLVKSGEKVD 518
A +VK D
Sbjct: 1130 LAKVVKGAIDTD 1141
>gi|71018553|ref|XP_759507.1| hypothetical protein UM03360.1 [Ustilago maydis 521]
gi|46098995|gb|EAK84228.1| hypothetical protein UM03360.1 [Ustilago maydis 521]
Length = 1716
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
Y FL + D D P +Y+ +T+Y+P K TP Q+W IK ++D VLFF+
Sbjct: 350 YSFLL--DLRDRDGNRPGDAEYDSRTVYIPKSAWKDFTPFERQFWEIKQNHWDTVLFFQK 407
Query: 230 GKFYELFHMDAVIGADEL 247
GKFYEL+ DA+IG E
Sbjct: 408 GKFYELYEEDALIGHREF 425
Score = 62.8 bits (151), Expect = 5e-07, Method: Compositional matrix adjust.
Identities = 36/107 (33%), Positives = 54/107 (50%), Gaps = 8/107 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYI--EDKR 446
RGT T DG IA L + + CL F THY ++A V+ ++M + +DKR
Sbjct: 1126 RGTSTFDGQAIAFAVLHHLVSRTRCLAFFLTHYTNLAYDFDSYSRVSNKHMQVLVDDDKR 1185
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQM 493
++F Y+L+ GI S+G VA LAG+P ++ V+ Q
Sbjct: 1186 E-----VIFTYRLIDGIAESSYGTQVAALAGVPHEICDRAAVVSKQF 1227
>gi|261188295|ref|XP_002620563.1| DNA mismatch repair protein Msh3 [Ajellomyces dermatitidis SLH14081]
gi|239593242|gb|EEQ75823.1| DNA mismatch repair protein Msh3 [Ajellomyces dermatitidis SLH14081]
Length = 1143
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/132 (33%), Positives = 70/132 (53%), Gaps = 7/132 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFE--YMSYIEDKR 446
RGT T+DG IA+ L+ ++ + LT+F THY +++ RE P +M + E
Sbjct: 995 RGTSTHDGVAIAQAVLDYMVRNLRSLTLFITHYQNLSSLAREFPKGELRNVHMKFTESGM 1054
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
DG D I FLY++ G+ +S+G NVA LA +P V+ T + ++E + ++L
Sbjct: 1055 -DGRD-ITFLYEVGEGVAHRSYGLNVARLAHVPTSVLDVARTKSAELEEKIRKKKLL--A 1110
Query: 507 FASLVKSGEKVD 518
A +VK D
Sbjct: 1111 LAKVVKGAIDTD 1122
>gi|225872379|ref|YP_002753834.1| DNA mismatch repair protein MutS [Acidobacterium capsulatum ATCC
51196]
gi|225791956|gb|ACO32046.1| DNA mismatch repair protein MutS [Acidobacterium capsulatum ATCC
51196]
Length = 893
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 55/185 (29%), Positives = 83/185 (44%), Gaps = 29/185 (15%)
Query: 330 TYLR-----TQCAHFGCTVIYSEAQKKQKKYVLEVPSKYAS-----KAKSNHQRVATKKK 379
TYLR A GC + A++ + V V ++ + + +S T+
Sbjct: 654 TYLRQAALLVILAQMGC---FVPAERMRFGLVDRVYTRIGASDNVARGRSTFMVEMTETA 710
Query: 380 NVENYVTPEC--------RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLR 429
+ N T RGT T DG +A TLE FL ++G T+FATHYH +
Sbjct: 711 TILNTATVRSLILLDEMGRGTATFDGLALAWATLE-FLHAEVGARTLFATHYHELTMLAE 769
Query: 430 EEPNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTV 489
+ P + ++ E + IVFL+++ PG KS+G VA LAG+P V++ V
Sbjct: 770 QLPRLGNLRVAVKESPKG-----IVFLHRMEPGAASKSYGIEVARLAGLPPRVIQRARQV 824
Query: 490 AFQME 494
Q E
Sbjct: 825 LKQHE 829
Score = 48.1 bits (113), Expect = 0.013, Method: Compositional matrix adjust.
Identities = 21/44 (47%), Positives = 29/44 (65%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
TP M Q+ K ++ D +LFF++G FYELF+ DA I A EL +
Sbjct: 14 TPLMRQYQAAKREHPDALLFFRMGDFYELFYEDAKIAARELQIT 57
>gi|399006214|ref|ZP_10708742.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM17]
gi|398122673|gb|EJM12259.1| DNA mismatch repair protein MutS [Pseudomonas sp. GM17]
Length = 859
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG +A E+ Q+ T+FATHY + EP VA +++ E
Sbjct: 700 RGTSTFDGLSLAWAAAERLAQLRAYTLFATHYFELTVLPENEPLVANVHLNATEHN---- 755
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
+ IVFL+ ++PG +S+G VA+LAG+P DV+
Sbjct: 756 -ERIVFLHHVLPGPASQSYGLAVAQLAGVPSDVI 788
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGES 261
L TP M Q+W +K+Q+ D ++F+++G FYE+F+ DA A L + G++
Sbjct: 8 LSSHTPMMQQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQA 66
>gi|425897835|ref|ZP_18874426.1| DNA mismatch repair protein MutS [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
gi|397892101|gb|EJL08579.1| DNA mismatch repair protein MutS [Pseudomonas chlororaphis subsp.
aureofaciens 30-84]
Length = 859
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG +A E+ Q+ T+FATHY + EP VA +++ E
Sbjct: 700 RGTSTFDGLSLAWAAAERLAQLRAYTLFATHYFELTVLPENEPLVANVHLNATEHN---- 755
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
+ IVFL+ ++PG +S+G VA+LAG+P DV+
Sbjct: 756 -ERIVFLHHVLPGPASQSYGLAVAQLAGVPSDVI 788
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGES 261
L TP M Q+W +K+Q+ D ++F+++G FYE+F+ DA A L + G++
Sbjct: 8 LSSHTPMMQQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQA 66
>gi|242216709|ref|XP_002474160.1| predicted protein [Postia placenta Mad-698-R]
gi|220726705|gb|EED80646.1| predicted protein [Postia placenta Mad-698-R]
Length = 949
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A E +I +FATH+H + +E P+V ++ K +D
Sbjct: 758 RGTSTYDGFGLAWAISEHVASEIHAFCLFATHFHELTALDQEIPHVKNLHVVAHVSKSDD 817
Query: 449 GID--TIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
I LYK+ PG+C +SFG +VAELA PE+VVK A ++E
Sbjct: 818 SARERDITLLYKVEPGVCDQSFGIHVAELANFPENVVKLAKRTADELE 865
>gi|357639667|ref|ZP_09137540.1| DNA mismatch repair protein MutS [Streptococcus urinalis 2285-97]
gi|418416981|ref|ZP_12990179.1| DNA mismatch repair protein mutS [Streptococcus urinalis
FB127-CNA-2]
gi|357588121|gb|EHJ57529.1| DNA mismatch repair protein MutS [Streptococcus urinalis 2285-97]
gi|410873037|gb|EKS20973.1| DNA mismatch repair protein mutS [Streptococcus urinalis
FB127-CNA-2]
Length = 851
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/95 (37%), Positives = 59/95 (62%), Gaps = 6/95 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A+ +E +G T+FATHYH + +E P++ ++S IE N+
Sbjct: 685 RGTATYDGMSLAQAIIEHIHHYVGAKTLFATHYHELTALEKELPHLVNVHVSTIE---NN 741
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
G + FL+K+ G KS+G +VA++AG+P+D++
Sbjct: 742 G--EVTFLHKIAEGPADKSYGIHVAKIAGLPDDLL 774
>gi|328866866|gb|EGG15249.1| mutS like protein [Dictyostelium fasciculatum]
Length = 1062
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/105 (34%), Positives = 55/105 (52%), Gaps = 5/105 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG IAR +E T+FATH+H + PN+ ++ E+
Sbjct: 950 RGTSTLDGAAIARAVIEHLYANKTRTLFATHHHELTSLASHMPNIQCYALAVKEED---- 1005
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
D ++F +K++PGI KS+G A LAG+P V++ + Q+E
Sbjct: 1006 -DDLLFTHKVMPGISNKSYGIFCARLAGVPLSVIQRSQQILEQLE 1049
>gi|47198543|emb|CAF88159.1| unnamed protein product [Tetraodon nigroviridis]
Length = 212
Score = 67.8 bits (164), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/97 (35%), Positives = 54/97 (55%), Gaps = 6/97 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A + +IGC +FATH+H + ++P V +++ + +
Sbjct: 108 RGTSTYDGFGLAWAISQHVASRIGCFCLFATHFHELTALAAQQPAVHNLHVTALTSQ--- 164
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKF 485
D + LY++ PG+C +SFG +VAE+AG P VV
Sbjct: 165 --DALTMLYRVRPGVCDQSFGIHVAEMAGFPPAVVAM 199
>gi|428225913|ref|YP_007110010.1| DNA mismatch repair protein MutS [Geitlerinema sp. PCC 7407]
gi|427985814|gb|AFY66958.1| DNA mismatch repair protein MutS [Geitlerinema sp. PCC 7407]
Length = 892
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/124 (35%), Positives = 62/124 (50%), Gaps = 14/124 (11%)
Query: 380 NVENYVTPEC--------RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLRE 430
N+ N+ TP+ RGT T DG IA E +IG T+FATHYH +
Sbjct: 731 NILNHATPQSLVLLDEIGRGTATFDGLAIAWSVAEYLAGEIGARTIFATHYHELNELASL 790
Query: 431 EPNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
PNVA Y +++ D IVFL+++ PG +S+G LAG+P V++ V
Sbjct: 791 LPNVA-NYQVVVKELP----DQIVFLHQVQPGGADRSYGIEAGRLAGLPAVVIQRARQVM 845
Query: 491 FQME 494
Q+E
Sbjct: 846 SQIE 849
>gi|389683302|ref|ZP_10174634.1| DNA mismatch repair protein MutS [Pseudomonas chlororaphis O6]
gi|388552815|gb|EIM16076.1| DNA mismatch repair protein MutS [Pseudomonas chlororaphis O6]
Length = 855
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/94 (38%), Positives = 53/94 (56%), Gaps = 5/94 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRNDG 449
RGT T DG +A E+ Q+ T+FATHY + EP VA +++ E
Sbjct: 696 RGTSTFDGLSLAWAAAERLAQLRAYTLFATHYFELTVLPESEPLVANVHLNATEHN---- 751
Query: 450 IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
+ IVFL+ ++PG +S+G VA+LAG+P DV+
Sbjct: 752 -ERIVFLHHVLPGPASQSYGLAVAQLAGVPSDVI 784
Score = 48.1 bits (113), Expect = 0.011, Method: Compositional matrix adjust.
Identities = 20/59 (33%), Positives = 34/59 (57%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGES 261
L TP M Q+W +K+Q+ D ++F+++G FYE+F+ DA A L + G++
Sbjct: 4 LSSHTPMMQQYWRLKNQHPDQLMFYRMGDFYEIFYEDAKKAAKLLDITLTARGQSAGQA 62
>gi|357162750|ref|XP_003579511.1| PREDICTED: DNA mismatch repair protein Msh3-like [Brachypodium
distachyon]
Length = 968
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/121 (35%), Positives = 65/121 (53%), Gaps = 16/121 (13%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLRE-EPNVAFEYMSYI----- 442
RGT T+DG IA TL+ L + C+ +F THY + RE E +V ++SY+
Sbjct: 773 RGTSTHDGVAIAYATLQYLLKEKKCIVIFVTHYPKILDIQREFEGSVGAYHVSYLSTRKL 832
Query: 443 ----EDKRNDGIDT-----IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQM 493
++K G +T I FLYKLV G +SFG NVA LA +P ++ + +A ++
Sbjct: 833 LEITDEKMEIGTETEDLGEITFLYKLVAGASDRSFGLNVALLAQLPLSCIRRASVMAAKL 892
Query: 494 E 494
+
Sbjct: 893 Q 893
>gi|284048549|ref|YP_003398888.1| DNA mismatch repair protein MutS [Acidaminococcus fermentans DSM
20731]
gi|283952770|gb|ADB47573.1| DNA mismatch repair protein MutS [Acidaminococcus fermentans DSM
20731]
Length = 869
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 59/97 (60%), Gaps = 8/97 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IAR +E F+ +I T+FATHYH + + +P + Y +++K
Sbjct: 701 RGTSTYDGMSIARAVVE-FINDKIRAKTLFATHYHELIELEQLDPGIK-NYSVAVKEKGK 758
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
+ +VFL ++VPG KS+G +VA LAG+PE VVK
Sbjct: 759 E----VVFLRRIVPGGTDKSYGIHVARLAGLPEKVVK 791
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 22/50 (44%), Positives = 33/50 (66%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESG 256
TP + Q+ IK Q+ D +LFF++G FYELF+ DA+ + EL + K +G
Sbjct: 5 TPMLQQYLEIKEQHKDELLFFRLGDFYELFNEDALTASRELNLTLTKRAG 54
>gi|312863960|ref|ZP_07724197.1| DNA mismatch repair protein MutS [Streptococcus vestibularis F0396]
gi|322517652|ref|ZP_08070517.1| DNA mismatch repair protein HexA [Streptococcus vestibularis ATCC
49124]
gi|311100526|gb|EFQ58732.1| DNA mismatch repair protein MutS [Streptococcus vestibularis F0396]
gi|322123729|gb|EFX95314.1| DNA mismatch repair protein HexA [Streptococcus vestibularis ATCC
49124]
Length = 852
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 65/108 (60%), Gaps = 8/108 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG +A+ +E F+ ++G T+FATHYH + P++ +++ +E
Sbjct: 685 RGTATYDGMALAQSIIE-FIHDKVGAKTMFATHYHELTALSNSLPHLVNVHVATLE---K 740
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
DG + FL+K+V G KS+G +VA++AG+P D+++ T+ Q+E
Sbjct: 741 DG--EVTFLHKIVDGPADKSYGIHVAKIAGLPADLLERAGTILTQLEG 786
>gi|421099771|ref|ZP_15560415.1| DNA mismatch repair protein MutS [Leptospira borgpetersenii str.
200901122]
gi|410797195|gb|EKR99310.1| DNA mismatch repair protein MutS [Leptospira borgpetersenii str.
200901122]
Length = 848
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 390 RGTGTNDGCVIARVTLEKF--LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IA LE F L + T+FATHYH L E ++ + Y+E
Sbjct: 688 RGTSTYDGMSIAWSILEYFSSLSVKPKTIFATHYHE----LTELSRLSGIFNLYLETLEK 743
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
+ D ++FL K+ G KSFG VA++AGIPE +VK T + +E++
Sbjct: 744 E--DKVLFLRKVKVGKAKKSFGIYVAKIAGIPESIVKRATELLIDLESK 790
Score = 45.1 bits (105), Expect = 0.11, Method: Compositional matrix adjust.
Identities = 21/52 (40%), Positives = 28/52 (53%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCT 258
TP M Q+ TIK D +LFF++G FYE+F DA I + L + K
Sbjct: 22 TPMMKQFLTIKKDFPDTILFFRMGDFYEMFLEDAKIASSILDIALTKRQNAV 73
>gi|358394352|gb|EHK43745.1| hypothetical protein TRIATDRAFT_127655 [Trichoderma atroviride IMI
206040]
Length = 925
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 58/109 (53%), Gaps = 4/109 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A E + +IGC +FATH+H + + P V +++ N
Sbjct: 745 RGTSTYDGFGLAWAISEHIVKEIGCFAMFATHFHELTALADQYPQVKNMHVTAHISGTNG 804
Query: 449 GIDT---IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++ + LYK+ PGIC +SFG +VAEL P+ VV+ A ++E
Sbjct: 805 DVNAKREVTLLYKVEPGICDQSFGIHVAELVRFPDKVVRMAKRKADELE 853
>gi|349581080|dbj|GAA26238.1| K7_Msh2p [Saccharomyces cerevisiae Kyokai no. 7]
Length = 964
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVA-FEYMSYIE---- 443
RGT T DG +A E +IGC +FATH+H + + PNV +++IE
Sbjct: 771 RGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELSEKLPNVKNMHVVAHIEKNLK 830
Query: 444 DKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++++D D I LYK+ PGI +SFG +VAE+ PE +VK A +++
Sbjct: 831 EQKHDDED-ITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELD 880
>gi|195436947|ref|XP_002066407.1| GK18274 [Drosophila willistoni]
gi|194162492|gb|EDW77393.1| GK18274 [Drosophila willistoni]
Length = 917
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/172 (30%), Positives = 80/172 (46%), Gaps = 18/172 (10%)
Query: 373 RVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREE 431
R AT K V + RGT T +GC IA E + C T+FATH+H + +
Sbjct: 734 RTATDKSLV--IIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLADNL 791
Query: 432 PNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAF 491
V +M+ + D N LY++ PG KSFG VA LA PE VV+ V
Sbjct: 792 STVKNCHMAAVADTTN-----FTLLYQVKPGCMEKSFGIQVARLANFPEHVVQNAQEVYH 846
Query: 492 QMEARHNLRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQTKKDLEDL 543
+ E H +Q +K ++++Q+A+E + + + T+ + EDL
Sbjct: 847 EFEDEHAEKQ----------TKADKELLDKIQEAIEQLSTAGNNTEINEEDL 888
>gi|365763167|gb|EHN04697.1| Msh2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 964
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVA-FEYMSYIE---- 443
RGT T DG +A E +IGC +FATH+H + + PNV +++IE
Sbjct: 771 RGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELSEKLPNVKNMHVVAHIEKNLK 830
Query: 444 DKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++++D D I LYK+ PGI +SFG +VAE+ PE +VK A +++
Sbjct: 831 EQKHDDED-ITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELD 880
>gi|448464317|ref|ZP_21598418.1| DNA mismatch repair protein MutS, partial [Halorubrum kocurii JCM
14978]
gi|445815736|gb|EMA65657.1| DNA mismatch repair protein MutS, partial [Halorubrum kocurii JCM
14978]
Length = 432
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/97 (42%), Positives = 54/97 (55%), Gaps = 8/97 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IAR E F+ ++G +FATHYH + L E AF + R
Sbjct: 223 RGTATTDGRAIARAAAE-FIHDELGATALFATHYHDLTD-LAAERERAFNL--HFTATRE 278
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
DG + FL+++VPG S+G VAELAG+P VV+
Sbjct: 279 DG--DVTFLHRVVPGASSSSYGVEVAELAGVPAPVVE 313
>gi|406862019|gb|EKD15071.1| MutS domain V [Marssonina brunnea f. sp. 'multigermtubi' MB_m1]
Length = 916
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/107 (35%), Positives = 58/107 (54%), Gaps = 3/107 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNV-AFEYMSYIEDKRN 447
RGT T DG +A E + +IGC ++FATH+H + + + P V +++I+D
Sbjct: 739 RGTSTYDGFGLAWAISEHIVKEIGCFSMFATHFHELTALVEQYPQVHNLHVVAHIDDN-G 797
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ LYK+ G+C +SFG +VAEL PE VV A ++E
Sbjct: 798 KAKREVTLLYKVEEGVCDQSFGIHVAELVRFPEKVVNMAKRKADELE 844
>gi|350272990|ref|YP_004884298.1| DNA mismatch repair protein MutS [Oscillibacter valericigenes
Sjm18-20]
gi|348597832|dbj|BAL01793.1| DNA mismatch repair protein MutS [Oscillibacter valericigenes
Sjm18-20]
Length = 866
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 45/108 (41%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL---QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG IAR +E ++G T+FATHYH L E N ++Y +
Sbjct: 708 RGTSTFDGMSIARAVVEYCADPKKLGAKTLFATHYHE----LTELENTLPGTVNYNIAVK 763
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
G D I+FL K+VPG +S+G VA LAG+P+ VV TV Q+E
Sbjct: 764 TRGED-IIFLRKIVPGGADRSYGIEVARLAGLPDKVVARARTVLEQLE 810
Score = 48.9 bits (115), Expect = 0.007, Method: Compositional matrix adjust.
Identities = 21/45 (46%), Positives = 29/45 (64%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL 247
+ + TP M Q+ IK QN D +LFF++G FYE+F DA + EL
Sbjct: 1 MAELTPMMKQYLKIKEQNPDSILFFRLGDFYEMFDTDARTASREL 45
>gi|190407259|gb|EDV10526.1| DNA mismatch repair protein MSH2 [Saccharomyces cerevisiae RM11-1a]
gi|323335633|gb|EGA76916.1| Msh2p [Saccharomyces cerevisiae Vin13]
Length = 964
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVA-FEYMSYIE---- 443
RGT T DG +A E +IGC +FATH+H + + PNV +++IE
Sbjct: 771 RGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELSEKLPNVKNMHVVAHIEKNLK 830
Query: 444 DKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++++D D I LYK+ PGI +SFG +VAE+ PE +VK A +++
Sbjct: 831 EQKHDDED-ITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELD 880
>gi|85712118|ref|ZP_01043171.1| DNA mismatch repair protein [Idiomarina baltica OS145]
gi|85694108|gb|EAQ32053.1| DNA mismatch repair protein [Idiomarina baltica OS145]
Length = 853
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 53/170 (31%), Positives = 80/170 (47%), Gaps = 22/170 (12%)
Query: 329 QTYLRTQCAHFGCTVIYSEAQKK--QKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVT 386
Q L AH GC V EA+ + + S + +S T+ N+ + T
Sbjct: 629 QAALIVILAHMGCFVPAREAEIGFVDRIFTRIGASDDIASGRSTFMVEMTETANILHNAT 688
Query: 387 PEC--------RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSV---ARRLREEPNV 434
E RGT T DG +A E+ ++ CLT+FATHY + A RL NV
Sbjct: 689 SESLVLMDEIGRGTSTYDGLSLAWSVAEQLASKLDCLTLFATHYFELTELAERLENSCNV 748
Query: 435 AFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
++E + ++ D IVFL+ + G +SFG VA+LAG+P +V++
Sbjct: 749 ------HVEAQEHN--DHIVFLHTVAEGSANRSFGLQVAKLAGVPNNVIE 790
Score = 50.4 bits (119), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/58 (39%), Positives = 34/58 (58%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGE 260
++ TP M Q+ IK+++ D +LF+++G FYELF+ DA A L S K GE
Sbjct: 11 IQAHTPMMQQYLRIKAEHPDMLLFYRMGDFYELFYDDAKRAAQLLDISLTKRGASNGE 68
>gi|242215157|ref|XP_002473396.1| predicted protein [Postia placenta Mad-698-R]
gi|220727493|gb|EED81410.1| predicted protein [Postia placenta Mad-698-R]
Length = 215
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYM-SYIEDKRN 447
RGT T DG IA L + L+ FATHY S+ PN+ +M + ++D++
Sbjct: 35 RGTSTYDGMAIAGAVLHQLATHTLALSFFATHYGSLTDDFAYHPNIRNMHMETMVDDEKR 94
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
+ +VFLYKL+ G SFG +VA LAG+P DVV+
Sbjct: 95 E----LVFLYKLIGGAASSSFGTHVASLAGVPSDVVE 127
>gi|323352314|gb|EGA84849.1| Msh2p [Saccharomyces cerevisiae VL3]
Length = 964
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVA-FEYMSYIE---- 443
RGT T DG +A E +IGC +FATH+H + + PNV +++IE
Sbjct: 771 RGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELSEKLPNVKNMHVVAHIEKNLK 830
Query: 444 DKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++++D D I LYK+ PGI +SFG +VAE+ PE +VK A +++
Sbjct: 831 EQKHDDED-ITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELD 880
>gi|401840373|gb|EJT43216.1| MSH2-like protein [Saccharomyces kudriavzevii IFO 1802]
Length = 964
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVA-FEYMSYIEDKRN 447
RGT T DG +A E +IGC +FATH+H + + PNV +++IE N
Sbjct: 771 RGTSTYDGFGLAWAIAEHIADKIGCFALFATHFHELTELSEKLPNVKNMHVVAHIEKNSN 830
Query: 448 D---GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ + I LYK+ PGI +SFG +VAE+ PE +VK A +++
Sbjct: 831 EQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELD 880
>gi|259149396|emb|CAY86200.1| Msh2p [Saccharomyces cerevisiae EC1118]
Length = 964
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVA-FEYMSYIE---- 443
RGT T DG +A E +IGC +FATH+H + + PNV +++IE
Sbjct: 771 RGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELSEKLPNVKNMHVVAHIEKNLK 830
Query: 444 DKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++++D D I LYK+ PGI +SFG +VAE+ PE +VK A +++
Sbjct: 831 EQKHDDED-ITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELD 880
>gi|410943920|ref|ZP_11375661.1| DNA mismatch repair protein MutS [Gluconobacter frateurii NBRC
101659]
Length = 876
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA TLE Q+G T+FATH+H + P +A Y +++ R +
Sbjct: 710 RGTATLDGLSIAWATLEALHTQLGSRTIFATHFHELGALTEFLPRLA-PYTMAVKEWRGE 768
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAF-----QMEARHNL 499
++F +++ PG KS+G +VA+LAGIP+ VV + + Q EAR +L
Sbjct: 769 ----VIFQHEVRPGSARKSWGLHVAKLAGIPQSVVNRASRLLATFEREQAEARSSL 820
Score = 51.2 bits (121), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGE 260
TP M QW+ +K Q D +LFF++G FYELF DA A L + GE
Sbjct: 10 TPSMAQWFDLKHQEPDALLFFRMGDFYELFFGDAQAAAMALDIALTARGNHNGE 63
>gi|343516975|ref|ZP_08753993.1| DNA mismatch repair protein MutS [Vibrio sp. N418]
gi|342794787|gb|EGU30541.1| DNA mismatch repair protein MutS [Vibrio sp. N418]
Length = 855
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 24/181 (13%)
Query: 329 QTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASK-----AKSNHQRVATKKKNVEN 383
QT L AH G Y A+ Q + + ++ + +S T+ N+ +
Sbjct: 625 QTALIALMAHIGS---YVPAESAQIGLIDRIFTRIGASDDLASGRSTFMVEMTETANILH 681
Query: 384 YVTPEC--------RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPN 433
T RGT T DG +A + E FL QIG LT+FATHY + + P+
Sbjct: 682 NATERSLVLMDEIGRGTSTYDGLSLAWASAE-FLAKQIGALTLFATHYFELTELPNQIPH 740
Query: 434 VAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQM 493
+A ++ +E D+I F++ + G KS+G VA LAG+P+ V+K T Q+
Sbjct: 741 LANVHLDAVEHG-----DSIAFMHAVQEGAASKSYGLAVAGLAGVPKTVIKQARTKLTQL 795
Query: 494 E 494
E
Sbjct: 796 E 796
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGE 260
+K TP M Q+ +K++N + +LF+++G FYELF+ DA + L S K GE
Sbjct: 5 QKHTPMMQQYLKLKAENPEIMLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGE 61
>gi|330800615|ref|XP_003288330.1| hypothetical protein DICPUDRAFT_55353 [Dictyostelium purpureum]
gi|325081628|gb|EGC35137.1| hypothetical protein DICPUDRAFT_55353 [Dictyostelium purpureum]
Length = 979
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/107 (38%), Positives = 62/107 (57%), Gaps = 6/107 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T DG IA L + + L +FATHY S+A EP++ E + Y+ + +
Sbjct: 824 RGTSTFDGYSIAYSVLNYITKNLKSLCIFATHYQSLAM----EPSIRNEISTGYMTCQVD 879
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ ++FLYKL GIC KS+G +VA +AG+P+++V + QME
Sbjct: 880 EEEKRVIFLYKLAKGICQKSYGLHVAAMAGLPKEIVAKAEKKSEQME 926
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/75 (45%), Positives = 45/75 (60%), Gaps = 2/75 (2%)
Query: 169 HYQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFK 228
Y FL + D + PDY+P+TL +P L K +P Q+W IKS+ +D V+FFK
Sbjct: 60 RYSFLVD--VKDGNGNKKGSPDYDPRTLQIPASCLTKFSPFERQFWDIKSKYYDTVVFFK 117
Query: 229 VGKFYELFHMDAVIG 243
GKFYEL+ DA IG
Sbjct: 118 KGKFYELYENDADIG 132
Score = 43.5 bits (101), Expect = 0.33, Method: Compositional matrix adjust.
Identities = 37/123 (30%), Positives = 61/123 (49%), Gaps = 9/123 (7%)
Query: 269 NYESQTPSGCFPDMSELLKYFENAFDHKEASSA--GNIIPKAGVDKEYDEVMDEIKSIEK 326
++E + +G + LL+Y KE+ IIP G+ KE+DE +I+ IE+
Sbjct: 503 DFEQEQINGNYSGYPNLLRYITTI---KESFKVEQDKIIPSKGLFKEFDECQKKIQQIEQ 559
Query: 327 EIQTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAK--SNHQRVATKKKNVENY 384
++ +L Q +F C I + K+ Y +EVP ++AK N+Q + +K K Y
Sbjct: 560 SLEEHLTEQKTYFSCRNIEFKHMGKE-IYQIEVPVSALNRAKLPKNYQ-LKSKTKAACRY 617
Query: 385 VTP 387
TP
Sbjct: 618 HTP 620
>gi|172002|gb|AAA34802.1| homologue of bacterial MutS protein [Saccharomyces cerevisiae]
Length = 966
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVA-FEYMSYIE---- 443
RGT T DG +A E +IGC +FATH+H + + PNV +++IE
Sbjct: 771 RGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELSEKLPNVKNMHVVAHIEKNLK 830
Query: 444 DKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++++D D I LYK+ PGI +SFG +VAE+ PE +VK A +++
Sbjct: 831 EQKHDDED-ITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELD 880
>gi|407070453|ref|ZP_11101291.1| DNA mismatch repair protein MutS [Vibrio cyclitrophicus ZF14]
Length = 853
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 79/178 (44%), Gaps = 16/178 (8%)
Query: 329 QTYLRTQCAHFGCTVIYSEAQ--KKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVT 386
QT L AH GC V A + + S + +S T+ N+ + T
Sbjct: 625 QTALIALMAHIGCYVPAESATIGSIDRIFTRIGASDDLASGRSTFMVEMTETANILHNAT 684
Query: 387 PEC--------RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFE 437
P RGT T DG +A + E QI +T+FATHY + + P +A
Sbjct: 685 PNSLVLMDEIGRGTSTYDGLSLAWASAEWLANQINAMTLFATHYFELTELPNQLPTLANV 744
Query: 438 YMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
++ +E D+I F++ + G KS+G VA LAG+P+ V+K T Q+E+
Sbjct: 745 HLDAVEHG-----DSIAFMHAVQEGAASKSYGLAVAGLAGVPKAVIKNARTKLTQLES 797
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGE 260
+K TP M Q+ +K++N + +LF+++G FYELF+ DA + L S K GE
Sbjct: 5 QKHTPMMQQYLKLKAENPEILLFYRMGDFYELFYDDAKKASQLLDISLTKRGSSNGE 61
>gi|365758493|gb|EHN00331.1| Msh2p [Saccharomyces cerevisiae x Saccharomyces kudriavzevii VIN7]
Length = 964
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/110 (36%), Positives = 59/110 (53%), Gaps = 5/110 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVA-FEYMSYIEDKRN 447
RGT T DG +A E +IGC +FATH+H + + PNV +++IE N
Sbjct: 771 RGTSTYDGFGLAWAIAEHIADKIGCFALFATHFHELTELSEKLPNVKNMHVVAHIEKNSN 830
Query: 448 D---GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ + I LYK+ PGI +SFG +VAE+ PE +VK A +++
Sbjct: 831 EQKHDDEDITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELD 880
>gi|225556119|gb|EEH04409.1| DNA mismatch repair protein msh3 [Ajellomyces capsulatus G186AR]
Length = 1166
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFE--YMSYIEDKR 446
RGT T+DG IA+ L+ ++ + LT+F THY +++ RE P +M + E
Sbjct: 1018 RGTSTHDGVAIAQAVLDYMVRNLRSLTLFITHYQNLSSMAREFPGGELRNVHMKFTESGM 1077
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
DG D I FLY++ G+ +S+G NVA LA +P+ V++ + ++E
Sbjct: 1078 -DGQD-ITFLYEVGEGVAHRSYGLNVARLANVPDSVLEVARAKSAELE 1123
>gi|6324482|ref|NP_014551.1| mismatch repair ATPase MSH2 [Saccharomyces cerevisiae S288c]
gi|2506880|sp|P25847.2|MSH2_YEAST RecName: Full=DNA mismatch repair protein MSH2; AltName: Full=MutS
protein homolog 2
gi|600468|emb|CAA58189.1| orf 00935 [Saccharomyces cerevisiae]
gi|1419934|emb|CAA99102.1| MSH2 [Saccharomyces cerevisiae]
gi|285814801|tpg|DAA10694.1| TPA: mismatch repair ATPase MSH2 [Saccharomyces cerevisiae S288c]
gi|392296738|gb|EIW07840.1| Msh2p [Saccharomyces cerevisiae CEN.PK113-7D]
Length = 964
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVA-FEYMSYIE---- 443
RGT T DG +A E +IGC +FATH+H + + PNV +++IE
Sbjct: 771 RGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELSEKLPNVKNMHVVAHIEKNLK 830
Query: 444 DKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++++D D I LYK+ PGI +SFG +VAE+ PE +VK A +++
Sbjct: 831 EQKHDDED-ITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELD 880
>gi|150017427|ref|YP_001309681.1| DNA mismatch repair protein MutS [Clostridium beijerinckii NCIMB
8052]
gi|189030761|sp|A6LWJ5.1|MUTS_CLOB8 RecName: Full=DNA mismatch repair protein MutS
gi|149903892|gb|ABR34725.1| DNA mismatch repair protein MutS [Clostridium beijerinckii NCIMB
8052]
Length = 928
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/137 (31%), Positives = 71/137 (51%), Gaps = 13/137 (9%)
Query: 390 RGTGTNDGCVIARVTLEKFL---QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG IA +E + C T+FATHYH + + P V Y ++ +
Sbjct: 696 RGTSTYDGLSIAWSVIEYITGNENLRCKTLFATHYHELVKLEGVLPGVK-NYSVAVKKMK 754
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHK 506
D+++FL K+V G +S+G VA+LAG+P+DV+ + +E +N IHK
Sbjct: 755 ----DSVIFLRKIVEGGADESYGIEVAKLAGLPDDVINRAKEILLGLEGENNFD---IHK 807
Query: 507 FAS--LVKSGEKVDVEE 521
+ ++++ VD+ +
Sbjct: 808 VTNTEIIENEVAVDINQ 824
Score = 45.1 bits (105), Expect = 0.097, Method: Compositional matrix adjust.
Identities = 24/74 (32%), Positives = 37/74 (50%), Gaps = 12/74 (16%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGESTLLTQ 266
TP M ++ K + DC+LF+++G FYE+F DA+ + EL E TG++
Sbjct: 4 TPMMVEYMKTKEEYSDCILFYRLGDFYEMFFDDAITVSREL------ELVLTGKN----- 52
Query: 267 LCNYESQTPSGCFP 280
C E + P P
Sbjct: 53 -CGLEERAPMCGIP 65
>gi|452822105|gb|EME29128.1| DNA mismatch repair protein MutS [Galdieria sulphuraria]
Length = 1007
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 63/107 (58%), Gaps = 8/107 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IA ++ ++L I CL++FATHYH + E F ++ ++ K
Sbjct: 824 RGTTTLDGLSIAW-SVAEYLSSNIQCLSIFATHYHEM-----NELASVFPWVINLQVKVI 877
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ D ++FL+K++PG KS+G VA L+G+P+ VV+ TV +E
Sbjct: 878 EKDDQVIFLHKVIPGGANKSYGIQVAGLSGLPDVVVERARTVWRTLE 924
Score = 40.0 bits (92), Expect = 3.4, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESG 256
K +P + +W KS++ D +L ++VG FYE F DA I A+ L + + G
Sbjct: 72 KLSPMLRHYWDTKSEHPDYLLLYRVGDFYESFFDDAQILAETLEVTLTSKGG 123
>gi|242218509|ref|XP_002475044.1| predicted protein [Postia placenta Mad-698-R]
gi|220725769|gb|EED79742.1| predicted protein [Postia placenta Mad-698-R]
Length = 1044
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A E +I +FATH+H + +E P+V ++ K +D
Sbjct: 853 RGTSTYDGFGLAWAISEHIASEIHAFCLFATHFHELTALDQESPHVKNLHVVAHVSKSDD 912
Query: 449 GID--TIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
I LYK+ PG+C +SFG +VAELA PE+VVK A ++E
Sbjct: 913 STHERDITLLYKVEPGVCDQSFGIHVAELANFPENVVKLAKRTADELE 960
>gi|417939187|ref|ZP_12582480.1| DNA mismatch repair protein MutS [Streptococcus infantis SK970]
gi|343390632|gb|EGV03212.1| DNA mismatch repair protein MutS [Streptococcus infantis SK970]
Length = 843
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/108 (33%), Positives = 62/108 (57%), Gaps = 6/108 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A+ +E + IG T+FATHYH + ++ E++ + +
Sbjct: 685 RGTATYDGMALAQSIIEYIHEHIGAKTLFATHYHELT-----SLEISLEHLVNVHVATLE 739
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
+ FL+K+ PG KS+G +VA++AG+P D++K T+ Q+E++
Sbjct: 740 QNGQVTFLHKIEPGPADKSYGIHVAKIAGLPVDLLKRADTILTQLESQ 787
Score = 44.7 bits (104), Expect = 0.14, Method: Compositional matrix adjust.
Identities = 22/47 (46%), Positives = 28/47 (59%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+K +P M Q+ IK Q D L F++G FYELF+ DAV A L S
Sbjct: 4 EKLSPGMQQYVDIKKQYPDAFLLFRMGDFYELFYEDAVNAAQILEIS 50
>gi|242229340|ref|XP_002477719.1| predicted protein [Postia placenta Mad-698-R]
gi|220722290|gb|EED77082.1| predicted protein [Postia placenta Mad-698-R]
Length = 235
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/97 (40%), Positives = 55/97 (56%), Gaps = 6/97 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYM-SYIEDKRN 447
RGT T DG IA L + L+ FATHY S+ PN+ +M + ++D++
Sbjct: 65 RGTSTYDGMAIAGAVLHQLATHTLALSFFATHYGSLTDDFAYHPNIRNMHMETMVDDEKR 124
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
+ +VFLYKL+ G SFG +VA LAG+P DVV+
Sbjct: 125 E----LVFLYKLIGGAASSSFGTHVASLAGVPSDVVE 157
>gi|325090698|gb|EGC44008.1| DNA mismatch repair protein [Ajellomyces capsulatus H88]
Length = 1166
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFE--YMSYIEDKR 446
RGT T+DG IA+ L+ ++ + LT+F THY +++ RE P +M + E
Sbjct: 1018 RGTSTHDGVAIAQAVLDYMVRNLRSLTLFITHYQNLSSMAREFPKGELRNVHMKFTESGM 1077
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
DG D I FLY++ G+ +S+G NVA LA +P+ V++ + ++E
Sbjct: 1078 -DGQD-ITFLYEVGEGVAHRSYGLNVARLANVPDSVLEVARAKSAELE 1123
>gi|410923475|ref|XP_003975207.1| PREDICTED: DNA mismatch repair protein Msh3-like [Takifugu rubripes]
Length = 1084
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/121 (33%), Positives = 66/121 (54%), Gaps = 9/121 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEP-NVAFEYMSYIEDKRN 447
RGT T+DG IA TLE F++ + LT+F THY + P +V+ +M+++ ++ +
Sbjct: 938 RGTSTHDGIAIAHATLEHFIRDVKALTLFVTHYPPLCELEHVYPEHVSNYHMAFLLNEPD 997
Query: 448 DGIDT-------IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLR 500
D I FLY+L G +S+G NVA LA IP+ ++ A ++E+ N R
Sbjct: 998 IAADADEVTPEFITFLYQLTEGAAGRSYGLNVARLADIPDPILHTAAGKARELESAVNAR 1057
Query: 501 Q 501
+
Sbjct: 1058 R 1058
>gi|343509704|ref|ZP_08746967.1| DNA mismatch repair protein MutS [Vibrio scophthalmi LMG 19158]
gi|342803886|gb|EGU39233.1| DNA mismatch repair protein MutS [Vibrio scophthalmi LMG 19158]
Length = 855
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 54/181 (29%), Positives = 83/181 (45%), Gaps = 24/181 (13%)
Query: 329 QTYLRTQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASK-----AKSNHQRVATKKKNVEN 383
QT L AH G Y A+ Q + + ++ + +S T+ N+ +
Sbjct: 625 QTALIALMAHIGS---YVPAESAQIGLIDRIFTRIGASDDLASGRSTFMVEMTETANILH 681
Query: 384 YVTPEC--------RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPN 433
T RGT T DG +A + E FL QIG LT+FATHY + + P+
Sbjct: 682 NATERSLVLMDEIGRGTSTYDGLSLAWASAE-FLAKQIGALTLFATHYFELTELPNQIPH 740
Query: 434 VAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQM 493
+A ++ +E D+I F++ + G KS+G VA LAG+P+ V+K T Q+
Sbjct: 741 LANVHLDAVEHG-----DSIAFMHAVQEGAASKSYGLAVAGLAGVPKAVIKQARTKLTQL 795
Query: 494 E 494
E
Sbjct: 796 E 796
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGE 260
+K TP M Q+ +K++N + +LF+++G FYELF+ DA + L S K GE
Sbjct: 5 QKHTPMMQQYLKLKAENPEIMLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGE 61
>gi|398332805|ref|ZP_10517510.1| DNA mismatch repair protein MutS [Leptospira alexanderi serovar
Manhao 3 str. L 60]
Length = 848
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 390 RGTGTNDGCVIARVTLEKF--LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IA LE F L + T+FATHYH L E ++ + Y+E
Sbjct: 688 RGTSTYDGMSIAWSILEYFSSLSVKPKTIFATHYHE----LTELSRLSGIFNLYLETLEK 743
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
+ D ++FL K+ G KSFG VA++AGIPE +VK T + +E++
Sbjct: 744 E--DKVLFLRKVKVGKAKKSFGIYVAKIAGIPESIVKRATELLIDLESK 790
Score = 43.1 bits (100), Expect = 0.42, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCT 258
TP M Q+ IK D +LFF++G FYE+F DA I + L + K
Sbjct: 22 TPMMKQFLAIKKDFPDTILFFRMGDFYEMFLEDAKIASSILDIALTKRQNAV 73
>gi|361131040|gb|EHL02770.1| putative DNA mismatch repair protein msh-2 [Glarea lozoyensis
74030]
Length = 783
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 57/107 (53%), Gaps = 3/107 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVA-FEYMSYIEDKRN 447
RGT T DG +A E + +IGC ++FATH+H + + P V +++I+D
Sbjct: 606 RGTSTYDGFGLAWAISEHIIKEIGCFSMFATHFHELTALVDTYPQVQNLHVVAHIDDN-G 664
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ LYK+ GIC +SFG +VAEL PE VV A ++E
Sbjct: 665 KAKREVTLLYKVEDGICDQSFGIHVAELVRFPEKVVNMAKRKADELE 711
>gi|359726497|ref|ZP_09265193.1| DNA mismatch repair protein MutS [Leptospira weilii str.
2006001855]
Length = 848
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 390 RGTGTNDGCVIARVTLEKF--LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IA LE F L + T+FATHYH L E ++ + Y+E
Sbjct: 688 RGTSTYDGMSIAWSILEYFSSLSVKPKTIFATHYHE----LTELSRLSGIFNLYLETLEK 743
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
+ D ++FL K+ G KSFG VA++AGIPE +VK T + +E++
Sbjct: 744 E--DKVLFLRKVKVGKAKKSFGIYVAKIAGIPESIVKRATELLIDLESK 790
Score = 43.1 bits (100), Expect = 0.44, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCT 258
TP M Q+ IK D +LFF++G FYE+F DA I + L + K
Sbjct: 22 TPMMKQFLAIKKDFPDTILFFRMGDFYEMFLEDAKIASSILDIALTKRQNAV 73
>gi|319411719|emb|CBQ73763.1| related to MSH6-DNA mismatch repair protein (N-terminal fragment)
[Sporisorium reilianum SRZ2]
Length = 1279
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
Y FL + D D P +Y+ +T+Y+P K TP Q+W IK ++D VLFF+
Sbjct: 345 YSFLL--DLRDKDGNRPGDVEYDSRTVYIPKSAWKDFTPFEKQFWEIKQNHWDTVLFFQK 402
Query: 230 GKFYELFHMDAVIGADEL 247
GKFYEL+ DA+IG E
Sbjct: 403 GKFYELYEEDALIGHREF 420
Score = 65.1 bits (157), Expect = 1e-07, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L + + CLT F THY ++A V+ ++M + D D
Sbjct: 1121 RGTSTFDGQAIAFAVLHHLVSRTRCLTFFLTHYTNLAYDFDSYSRVSNKHMQVLVD---D 1177
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQM 493
++F Y+LV GI S+G VA LAG+P ++ V+ Q
Sbjct: 1178 AKREVIFTYRLVDGIAESSYGTQVAALAGVPLEICDRAAVVSKQF 1222
>gi|359490375|ref|XP_002263286.2| PREDICTED: DNA mismatch repair protein Msh3-like [Vitis vinifera]
Length = 1137
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/128 (32%), Positives = 64/128 (50%), Gaps = 22/128 (17%)
Query: 390 RGTGTNDGCVIARVTLEKFLQIG-CLTVFATHYHSVARRLREEP-NVAFEYMSYIEDKRN 447
RGT T+DG IA TL L+ C+ +F THY + E P +V ++SY+ +R
Sbjct: 907 RGTSTHDGVAIAYATLHYLLEHKRCMVLFVTHYPKIVDVKNEFPGSVGAYHVSYMMSQRA 966
Query: 448 DGI--------------------DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGT 487
+ + + +LYKLVPG+ +SFGF VA+LA +P ++
Sbjct: 967 MDMDTDTDKTDSKSDKNAQTMDHEDVTYLYKLVPGVSERSFGFKVAQLAQLPSSCIRRAN 1026
Query: 488 TVAFQMEA 495
+A ++EA
Sbjct: 1027 VMAAELEA 1034
>gi|45199121|ref|NP_986150.1| AFR603Cp [Ashbya gossypii ATCC 10895]
gi|44985261|gb|AAS53974.1| AFR603Cp [Ashbya gossypii ATCC 10895]
gi|374109382|gb|AEY98288.1| FAFR603Cp [Ashbya gossypii FDAG1]
Length = 956
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 39/107 (36%), Positives = 59/107 (55%), Gaps = 3/107 (2%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVA-FEYMSYIEDKRN 447
RGT T DG +A E + IGC +FATH+H + + PNV ++++E+K +
Sbjct: 766 RGTSTYDGFGLAWSISEHIAKNIGCFALFATHFHELTALADDCPNVTNLHVVAHVEEKSH 825
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
D I LYK+ PGI +SFG +VAE+ P +VK A +++
Sbjct: 826 KS-DDITLLYKVEPGISDQSFGIHVAEVVQFPSKIVKMAKRKATELD 871
>gi|456865646|gb|EMF83980.1| DNA mismatch repair protein MutS [Leptospira weilii serovar Topaz
str. LT2116]
Length = 848
Score = 67.4 bits (163), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 390 RGTGTNDGCVIARVTLEKF--LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IA LE F L + T+FATHYH L E ++ + Y+E
Sbjct: 688 RGTSTYDGMSIAWSILEYFSSLSVKPKTIFATHYHE----LTELSRLSGIFNLYLETLEK 743
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
+ D ++FL K+ G KSFG VA++AGIPE +VK T + +E++
Sbjct: 744 E--DKVLFLRKVKVGKAKKSFGIYVAKIAGIPESIVKRATELLIDLESK 790
Score = 43.1 bits (100), Expect = 0.41, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCT 258
TP M Q+ IK D +LFF++G FYE+F DA I + L + K
Sbjct: 22 TPMMKQFLAIKKDFPDTILFFRMGDFYEMFLEDAKIASSILDIALTKRQNAV 73
>gi|432329250|ref|YP_007247394.1| DNA mismatch repair protein MutS [Aciduliprofundum sp. MAR08-339]
gi|432135959|gb|AGB05228.1| DNA mismatch repair protein MutS [Aciduliprofundum sp. MAR08-339]
Length = 829
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 47/112 (41%), Positives = 60/112 (53%), Gaps = 18/112 (16%)
Query: 390 RGTGTNDGCVIA-RVTLEKFLQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA +T +I T+FATHYH L E NV +E+ RN
Sbjct: 670 RGTSTYDGLAIAWSITEHIHNKIKARTIFATHYHH----LIELENV-------LENVRNY 718
Query: 449 GI------DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
I D +VF+ K++PG KS+G VA+LAG+PEDVVK V +E
Sbjct: 719 HIAVKETPDGLVFVRKVMPGGMSKSYGIEVAKLAGVPEDVVKRAKNVLEMIE 770
Score = 47.4 bits (111), Expect = 0.020, Method: Compositional matrix adjust.
Identities = 22/49 (44%), Positives = 29/49 (59%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
TP M Q+ IK++ D +LFF+VG FYE F DA I + EL + S
Sbjct: 3 TPLMRQYHKIKAKYRDAILFFRVGDFYETFEEDAKIVSKELNIVLTRRS 51
>gi|348527286|ref|XP_003451150.1| PREDICTED: DNA mismatch repair protein Msh3-like [Oreochromis
niloticus]
Length = 1114
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 44/130 (33%), Positives = 70/130 (53%), Gaps = 15/130 (11%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEP-NVAFEYMSYIEDKRN 447
RGT T+DG IA TLE F++ + LT+F THY + R P +V+ +M+++ ++ +
Sbjct: 966 RGTSTHDGIAIAYATLEYFIKDVKALTLFVTHYPPLCELERVYPEHVSNYHMAFLLNEPD 1025
Query: 448 DGIDT---------IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQM----E 494
DT I FLY+L G +S+G NVA LA IP+ ++ A ++ E
Sbjct: 1026 ISADTDDGEVQPEFITFLYQLTEGAAGRSYGLNVARLADIPDPILHTAAHKARELEKMVE 1085
Query: 495 ARHNLRQLFI 504
AR ++L +
Sbjct: 1086 ARRKNKKLLL 1095
>gi|453330894|dbj|GAC87221.1| DNA mismatch repair protein MutS [Gluconobacter thailandicus NBRC
3255]
Length = 876
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA TLE Q+G T+FATH+H + P +A Y +++ R +
Sbjct: 710 RGTATLDGLSIAWATLEALHTQLGSRTIFATHFHELGALTEFLPRLA-PYTMAVKEWRGE 768
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAF-----QMEARHNL 499
++F +++ PG KS+G +VA+LAGIP+ VV + + Q EAR +L
Sbjct: 769 ----VIFQHEVRPGSARKSWGLHVAKLAGIPQSVVNRASRLLATFEREQAEARSSL 820
Score = 50.8 bits (120), Expect = 0.002, Method: Compositional matrix adjust.
Identities = 23/54 (42%), Positives = 29/54 (53%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGE 260
TP M QW+ +K Q D +LFF++G FYELF DA A L + GE
Sbjct: 10 TPSMAQWFDLKHQEPDALLFFRMGDFYELFFGDAQAAAMALDIALTARGNHNGE 63
>gi|359405902|ref|ZP_09198629.1| DNA mismatch repair protein MutS [Prevotella stercorea DSM 18206]
gi|357557252|gb|EHJ38804.1| DNA mismatch repair protein MutS [Prevotella stercorea DSM 18206]
Length = 878
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 63/182 (34%), Positives = 81/182 (44%), Gaps = 22/182 (12%)
Query: 329 QTYLRTQCAHFGCTVIYSEAQKK--QKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVT 386
QT L T A GC V A K + S S +S T+ N+ N VT
Sbjct: 635 QTALITLMAQMGCFVPADSAHVGVVDKIFTRVGASDNISLGESTFMVEMTEASNILNNVT 694
Query: 387 PEC--------RGTGTNDGCVIARVTLEKFLQ---IGCLTVFATHYHSVARRLREEPNVA 435
P RGT T DG IA +E Q T+FATHYH + E
Sbjct: 695 PRSLVLFDELGRGTSTYDGISIAWAIVEYLHQNPKAQARTLFATHYHEL-----NEMEKN 749
Query: 436 FEYM-SY-IEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQM 493
FE + +Y + K DG ++FL KL+ G SFG +VAE+AG+P VVK + Q+
Sbjct: 750 FERIKNYNVSVKELDG--KVIFLRKLMRGGSEHSFGIHVAEIAGMPRSVVKRAENILKQL 807
Query: 494 EA 495
EA
Sbjct: 808 EA 809
Score = 40.4 bits (93), Expect = 2.5, Method: Compositional matrix adjust.
Identities = 19/49 (38%), Positives = 28/49 (57%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
TP M Q++T K ++ D +L F+ G FYE + DAV A L + + S
Sbjct: 11 TPMMRQFYTFKKEHPDALLLFRCGDFYETYADDAVEAAKILGITLTRRS 59
>gi|269926487|ref|YP_003323110.1| DNA mismatch repair protein MutS [Thermobaculum terrenum ATCC
BAA-798]
gi|269790147|gb|ACZ42288.1| DNA mismatch repair protein MutS [Thermobaculum terrenum ATCC
BAA-798]
Length = 862
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/158 (32%), Positives = 79/158 (50%), Gaps = 15/158 (9%)
Query: 390 RGTGTNDGCVIARVTLEKF---LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG IA+ +E + T+FATHYH + P V M +E+
Sbjct: 699 RGTSTYDGMAIAQAVVEYLHNNTRTRARTLFATHYHELTSLEEFLPRVKNFRMEVLEEG- 757
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR-------HNL 499
ND +VFL K+VPG KS+G +VA+LAGIP+ V++ + ++EA+ N
Sbjct: 758 ND----VVFLRKVVPGGADKSYGIHVAKLAGIPKSVIRRAQELLKELEAQLKKEEEDDNP 813
Query: 500 RQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQTK 537
+ F++ L++ +DVE + K FE + +
Sbjct: 814 QLTFLNPDDGLLQELADLDVESMTPVEALTKLFEIRQR 851
Score = 43.1 bits (100), Expect = 0.39, Method: Compositional matrix adjust.
Identities = 20/41 (48%), Positives = 25/41 (60%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL 247
TP Q+ IK Q D +LFF++G FYE F DA I + EL
Sbjct: 3 TPARQQYLRIKQQYPDAILFFRLGDFYETFDEDAKIVSSEL 43
>gi|197097574|ref|NP_001125043.1| DNA mismatch repair protein Msh3 [Pongo abelii]
gi|55726784|emb|CAH90153.1| hypothetical protein [Pongo abelii]
Length = 1023
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/158 (32%), Positives = 83/158 (52%), Gaps = 14/158 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEY-MSYI--ED- 444
RGT T+DG IA TLE F++ + LT+F THY V + + Y M ++ ED
Sbjct: 865 RGTSTHDGIAIAYATLEYFIRDVKSLTLFVTHYPPVCELEKNYSHQVGNYHMGFLVSEDA 924
Query: 445 -KRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K + G D + FLY++ GI +S+G NVA+LA +P +++K + ++E N
Sbjct: 925 SKLDPGTEEQVPDFVTFLYQITRGIAARSYGLNVAKLADVPGEILKKAAHKSKELEGLIN 984
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQT 536
++ + FA L + ++LQK E + E+QT
Sbjct: 985 TKRKRLKYFAKLWTMH---NAQDLQKWTEEFEMEETQT 1019
>gi|417780464|ref|ZP_12428225.1| DNA mismatch repair protein MutS [Leptospira weilii str.
2006001853]
gi|410779173|gb|EKR63790.1| DNA mismatch repair protein MutS [Leptospira weilii str.
2006001853]
Length = 848
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 43/109 (39%), Positives = 60/109 (55%), Gaps = 8/109 (7%)
Query: 390 RGTGTNDGCVIARVTLEKF--LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IA LE F L + T+FATHYH L E ++ + Y+E
Sbjct: 688 RGTSTYDGMSIAWSILEYFSSLSVKPKTIFATHYHE----LTELSRLSGIFNLYLETLEK 743
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
+ D ++FL K+ G KSFG VA++AGIPE +VK T + +E++
Sbjct: 744 E--DKVLFLRKVKVGKAKKSFGIYVAKIAGIPESIVKRATELLIDLESK 790
Score = 43.1 bits (100), Expect = 0.43, Method: Compositional matrix adjust.
Identities = 20/52 (38%), Positives = 27/52 (51%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCT 258
TP M Q+ IK D +LFF++G FYE+F DA I + L + K
Sbjct: 22 TPMMKQFLAIKKDFPDTILFFRMGDFYEMFLEDAKIASSILDIALTKRQNAV 73
>gi|295696238|ref|YP_003589476.1| DNA mismatch repair protein MutS [Kyrpidia tusciae DSM 2912]
gi|295411840|gb|ADG06332.1| DNA mismatch repair protein MutS [Kyrpidia tusciae DSM 2912]
Length = 879
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 59/108 (54%), Gaps = 8/108 (7%)
Query: 390 RGTGTNDGCVIARVTLEKF---LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKR 446
RGT T DG IAR +E ++G T+FATHYH + E P V ++ + R
Sbjct: 690 RGTSTYDGMSIARAAVEYIHDPTRVGARTLFATHYHELTGLADELPGV----HNFSTEVR 745
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
D IVFL++LV +S+G +VA LAG+PED+++ + ME
Sbjct: 746 EDS-GGIVFLHRLVDRPADRSYGIHVARLAGLPEDLLERAEAILTSME 792
Score = 44.7 bits (104), Expect = 0.15, Method: Compositional matrix adjust.
Identities = 21/53 (39%), Positives = 28/53 (52%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTG 259
TP M Q+ +K + D +L F++G FYELF DA I A EL + G
Sbjct: 4 TPMMQQYLDVKGRCPDALLMFRLGDFYELFFEDAEIAARELEITLTGRDAGGG 56
>gi|451848741|gb|EMD62046.1| hypothetical protein COCSADRAFT_147401 [Cochliobolus sativus ND90Pr]
Length = 1144
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L+ ++ + LT+F THY +AR P+ + + +++N
Sbjct: 1003 RGTSTFDGVAIAEAVLDYVIRDLQSLTLFITHYQHLARVPSRFPDGQLKNVHMRFEEQNG 1062
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
G + +VFLY+ GI +S+G NVA LA +P+ V+ + ++E + + HK A
Sbjct: 1063 GRE-VVFLYEATEGISHRSYGLNVARLARVPDKVIDVAEVKSAELE-----QSMEAHKLA 1116
Query: 509 SL 510
+L
Sbjct: 1117 NL 1118
>gi|324506957|gb|ADY42957.1| DNA mismatch repair protein MSH2 [Ascaris suum]
Length = 414
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 36/103 (34%), Positives = 56/103 (54%), Gaps = 18/103 (17%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A + L +I CL +FATH+H ++ PN RN
Sbjct: 278 RGTSTYDGFGLAWAIADDILARIKCLCIFATHFHEMSALHERYPNAL----------RNI 327
Query: 449 GIDT-------IVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
++T ++ LYK++PGI +SFG N+A+L GI +D+++
Sbjct: 328 RVETQIDENGELILLYKVMPGIAERSFGINIAKLVGISDDIIE 370
>gi|415886657|ref|ZP_11548437.1| DNA mismatch repair protein MutS [Bacillus methanolicus MGA3]
gi|387587344|gb|EIJ79667.1| DNA mismatch repair protein MutS [Bacillus methanolicus MGA3]
Length = 870
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 60/108 (55%), Gaps = 6/108 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A+ +E +IG T+F+THYH + E P V ++S IE
Sbjct: 690 RGTSTYDGMALAQAIIEYIHNRIGAKTLFSTHYHELTVLEEELPKVKNVHVSAIEQN--- 746
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEAR 496
+VFL+K+ G KS+G +VA+LA +PED++ + ++E +
Sbjct: 747 --GKVVFLHKIKEGAADKSYGIHVAQLAELPEDLINRANEILQELEQK 792
Score = 45.1 bits (105), Expect = 0.099, Method: Compositional matrix adjust.
Identities = 20/54 (37%), Positives = 29/54 (53%)
Query: 207 TPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGE 260
TP + Q+ IK+ D LFF++G FYE+F DA+ + EL + G E
Sbjct: 5 TPMIQQYLQIKADYQDAFLFFRLGDFYEMFFDDAIKASQELEITLTSRDGGGDE 58
>gi|375091619|ref|ZP_09737908.1| DNA mismatch repair protein MutS [Helcococcus kunzii ATCC 51366]
gi|374563141|gb|EHR34463.1| DNA mismatch repair protein MutS [Helcococcus kunzii ATCC 51366]
Length = 869
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 52/169 (30%), Positives = 84/169 (49%), Gaps = 22/169 (13%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA+ +E + I C T+FATHYH + NV + E+K
Sbjct: 707 RGTSTYDGYSIAKSIIEYISKNINCKTLFATHYHELTDLEDSMENVENLKVEIYEEK--- 763
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
D IVFL K+V G +S+G VA+L+G+P++++ F V ++ L + FA
Sbjct: 764 --DNIVFLRKIVRGKTDRSYGIEVAKLSGLPDEIL-FRANVILSSLDKNILEENKQLSFA 820
Query: 509 S-------------LVKSGEKVDVEEL--QKALESVKSFESQTKKDLED 542
S ++K + +D++ L AL+ + SF+++ K +D
Sbjct: 821 SVNEDNENEIKRDLIIKELKSIDIDNLTPMDALQLINSFKNKAKDITDD 869
Score = 53.9 bits (128), Expect = 2e-04, Method: Compositional matrix adjust.
Identities = 22/45 (48%), Positives = 30/45 (66%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADEL 247
+ K TP M Q+ IK QN D +LF+++G FYE+F DA I + EL
Sbjct: 6 INKLTPMMQQYMKIKQQNMDKILFYRLGDFYEMFFDDAKIASKEL 50
>gi|170589733|ref|XP_001899628.1| MutS domain III family protein [Brugia malayi]
gi|158593841|gb|EDP32436.1| MutS domain III family protein [Brugia malayi]
Length = 877
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 34/110 (30%), Positives = 62/110 (56%), Gaps = 4/110 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A E + ++ C ++ATHYH +A R P + S + D
Sbjct: 736 RGTSTYDGFGLAWAIAEDIVSRVKCFCIYATHYHDLAGLSRVYPK---QLKSVCTASQVD 792
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
++ LYK++PG+ +SFG N+ ++ G+PE+V++ + + +EA+++
Sbjct: 793 ENGQLILLYKIIPGVAGRSFGLNIGKMVGLPENVLQTASDMLESLEAKNS 842
>gi|401883891|gb|EJT48075.1| hypothetical protein A1Q1_02991 [Trichosporon asahii var. asahii
CBS 2479]
Length = 987
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 10/176 (5%)
Query: 365 SKAKSNHQRVATKKKNVENYVTPEC--------RGTGTNDGCVIARVTLEKFLQIGCLTV 416
S+ KS T+ ++ VTP RGT T DG IA TL + T+
Sbjct: 802 SRGKSTFMVEMTETSDILRTVTPRTLVVLDELGRGTSTFDGVAIAYATLSHLAALDIPTL 861
Query: 417 FATHYHSVARRLREEPNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELA 476
F THY ++R E V+ +M++ E G + I FLYKL G+ SFG A LA
Sbjct: 862 FVTHYPLLSRLEAEYSTVSNWHMAFTEMPGPSGPE-ITFLYKLRRGLADASFGIWCARLA 920
Query: 477 GIPEDVVKFGTTVAFQM-EARHNLRQLFIHKFASLVKSGEKVDVEELQKALESVKS 531
G+P+++++ + +M E + + + K+ + G+ E+L+ A+ V +
Sbjct: 921 GLPDELLETAQEKSERMREETRDRGRAAVGKYLRALVGGDLTAAEKLEGAMAYVDA 976
>gi|388851859|emb|CCF54453.1| related to MSH6-DNA mismatch repair protein [Ustilago hordei]
Length = 1313
Score = 67.0 bits (162), Expect = 2e-08, Method: Compositional matrix adjust.
Identities = 33/78 (42%), Positives = 45/78 (57%), Gaps = 2/78 (2%)
Query: 170 YQFLHPDHILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKV 229
Y FL + D D P +Y+ +T+Y+P K TP Q+W IK ++D VLFF+
Sbjct: 351 YSFLV--DLRDKDGNRPGDGEYDSRTVYIPKSAWKDFTPFEEQFWRIKQNHWDTVLFFQK 408
Query: 230 GKFYELFHMDAVIGADEL 247
GKFYEL+ DA+IG E
Sbjct: 409 GKFYELYEEDALIGHREF 426
Score = 66.2 bits (160), Expect = 5e-08, Method: Compositional matrix adjust.
Identities = 37/105 (35%), Positives = 53/105 (50%), Gaps = 4/105 (3%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L + + CLT F THY ++A V+ ++M + D D
Sbjct: 1127 RGTSTFDGQAIAFAVLHHLVSRTRCLTFFLTHYTNLAYDFDSYSRVSNKHMQVLVD---D 1183
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQM 493
++F Y+LV GI S+G VA LAG+P ++ V+ Q
Sbjct: 1184 AKREVIFTYRLVDGIAESSYGTQVAALAGVPHEICDRAAVVSKQF 1228
>gi|448514859|ref|XP_003867187.1| Msh2 DNA mismatch repair factor [Candida orthopsilosis Co 90-125]
gi|380351526|emb|CCG21749.1| Msh2 DNA mismatch repair factor [Candida orthopsilosis]
Length = 894
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Query: 374 VATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFLQIG-CLTVFATHYHSVARRLREEP 432
+AT N + RGT T DG +A E +Q C +FATH+H + + + P
Sbjct: 713 LATATSNSLLIIDELGRGTSTYDGFGLAWSISEHLIQTKKCFALFATHFHELNKLAEKYP 772
Query: 433 NVA--FEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
+ ++Y+E+K D I +YK+ PGI KSFG NVAE+ P ++ A
Sbjct: 773 HSVENLHVVAYVENK-----DDITLMYKIEPGISSKSFGINVAEMVKFPPKIINMAKRKA 827
Query: 491 FQMEARHNLRQ 501
+++ NL++
Sbjct: 828 DELQNDGNLKK 838
>gi|312873745|ref|ZP_07733790.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF 2052A-d]
gi|311090743|gb|EFQ49142.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF 2052A-d]
Length = 854
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG +A + K+L ++G T+FATHYH + +E ++ ++ ++ +
Sbjct: 690 RGTATYDGMALAGAII-KYLHDKVGAKTLFATHYHELTDLDQELAHLKNIHVGATQENGH 748
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKF 507
++FL+K++PG +S+G +VA+LAG+P V++ EA H L+QL H
Sbjct: 749 -----LIFLHKILPGAADQSYGIHVAQLAGLPTKVLR---------EATHMLKQLEKHSD 794
Query: 508 ASLVKSGEKVDV 519
S E++D+
Sbjct: 795 NQAAFSDEQLDL 806
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
+K TP M Q++ IK Q D LF++VG FYELF DAV GA L + S
Sbjct: 3 EKITPMMEQYYKIKQQYPDAFLFYRVGDFYELFEDDAVKGAKLLELTLTHRS 54
>gi|424047693|ref|ZP_17785251.1| DNA mismatch repair protein MutS [Vibrio cholerae HENC-03]
gi|408883657|gb|EKM22436.1| DNA mismatch repair protein MutS [Vibrio cholerae HENC-03]
Length = 853
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 15/114 (13%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A + E QIG +T+FATHY + PN+A ++ +E
Sbjct: 696 RGTSTYDGLSLAWASAEWLATQIGAMTLFATHYFELTELPNLLPNLANVHLDAVEHG--- 752
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
D+I F++ + G KS+G VA LAG+P+ V+K ARH L QL
Sbjct: 753 --DSIAFMHAVQEGAASKSYGLAVAGLAGVPKPVIK---------NARHKLSQL 795
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGE 260
+K TP M Q+ +K++N + +LF+++G FYELF+ DA + L S K GE
Sbjct: 5 QKHTPMMQQYLKLKAENPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGE 61
>gi|424034012|ref|ZP_17773422.1| DNA mismatch repair protein MutS [Vibrio cholerae HENC-01]
gi|408873756|gb|EKM12945.1| DNA mismatch repair protein MutS [Vibrio cholerae HENC-01]
Length = 853
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 15/114 (13%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A + E QIG +T+FATHY + PN+A ++ +E
Sbjct: 696 RGTSTYDGLSLAWASAEWLATQIGAMTLFATHYFELTELPNLLPNLANVHLDAVEHG--- 752
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
D+I F++ + G KS+G VA LAG+P+ V+K ARH L QL
Sbjct: 753 --DSIAFMHAVQEGAASKSYGLAVAGLAGVPKPVIK---------NARHKLSQL 795
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGE 260
+K TP M Q+ +K++N + +LF+++G FYELF+ DA + L S K GE
Sbjct: 5 QKHTPMMQQYLKLKAENPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGE 61
>gi|315653064|ref|ZP_07905992.1| DNA mismatch repair protein HexA [Lactobacillus iners ATCC 55195]
gi|315489599|gb|EFU79233.1| DNA mismatch repair protein HexA [Lactobacillus iners ATCC 55195]
Length = 854
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG +A + K+L ++G T+FATHYH + +E ++ ++ ++ +
Sbjct: 690 RGTATYDGMALAGAII-KYLHDKVGAKTLFATHYHELTDLDQELAHLKNIHVGATQENGH 748
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKF 507
++FL+K++PG +S+G +VA+LAG+P V++ EA H L+QL H
Sbjct: 749 -----LIFLHKILPGAADQSYGIHVAQLAGLPTKVLR---------EATHMLKQLEKHSD 794
Query: 508 ASLVKSGEKVDV 519
S E++D+
Sbjct: 795 NQAAFSDEQLDL 806
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
+K TP M Q++ IK Q D LF++VG FYELF DAV GA L + S
Sbjct: 3 EKITPMMEQYYKIKQQYPDAFLFYRVGDFYELFEDDAVKGAKLLELTLTHRS 54
>gi|256271408|gb|EEU06469.1| Msh2p [Saccharomyces cerevisiae JAY291]
Length = 964
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVA-FEYMSYIE---- 443
RGT T DG +A E +IGC +FATH+H + + PN+ +++IE
Sbjct: 771 RGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELSEKLPNIKNMHVVAHIEKNLK 830
Query: 444 DKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++++D D I LYK+ PGI +SFG +VAE+ PE +VK A +++
Sbjct: 831 EQKHDDED-ITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELD 880
>gi|451998559|gb|EMD91023.1| hypothetical protein COCHEDRAFT_1176734 [Cochliobolus heterostrophus
C5]
Length = 1096
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/122 (32%), Positives = 66/122 (54%), Gaps = 7/122 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA L+ ++ + LT+F THY +A+ PN + + +++N
Sbjct: 955 RGTSTFDGVAIAEAVLDYVIRDLQSLTLFITHYQHLAKVPSRFPNGQLKNVHMRFEEQNG 1014
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKFA 508
G + +VFLY+ G+ +S+G NVA LA +PE V+ + ++E + + HK A
Sbjct: 1015 GRE-VVFLYEATEGMSHRSYGLNVARLARVPEKVIDVAQVKSTELE-----QSMEAHKLA 1068
Query: 509 SL 510
+L
Sbjct: 1069 NL 1070
>gi|312870746|ref|ZP_07730853.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF 3008A-a]
gi|329919600|ref|ZP_08276589.1| DNA mismatch repair protein MutS [Lactobacillus iners SPIN 1401G]
gi|311093758|gb|EFQ52095.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF 3008A-a]
gi|328937405|gb|EGG33827.1| DNA mismatch repair protein MutS [Lactobacillus iners SPIN 1401G]
Length = 854
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG +A + K+L ++G T+FATHYH + +E ++ ++ ++ +
Sbjct: 690 RGTATYDGMALAGAII-KYLHDKVGAKTLFATHYHELTDLDQELAHLKNIHVGATQENGH 748
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKF 507
++FL+K++PG +S+G +VA+LAG+P V++ EA H L+QL H
Sbjct: 749 -----LIFLHKILPGAADQSYGIHVAQLAGLPTKVLR---------EATHMLKQLEKHSD 794
Query: 508 ASLVKSGEKVDV 519
S E++D+
Sbjct: 795 NQAAFSDEQLDL 806
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
+K TP M Q++ IK Q D LF++VG FYELF DAV GA L + S
Sbjct: 3 EKITPMMEQYYKIKQQYPDAFLFYRVGDFYELFEDDAVKGAKLLELTLTHRS 54
>gi|84390123|ref|ZP_00991385.1| DNA mismatch repair protein [Vibrio splendidus 12B01]
gi|84376777|gb|EAP93652.1| DNA mismatch repair protein [Vibrio splendidus 12B01]
Length = 861
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 16/178 (8%)
Query: 329 QTYLRTQCAHFGCTVIYSEAQ--KKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVT 386
QT L AH GC V A + + S + +S T+ N+ + T
Sbjct: 633 QTALIALMAHIGCYVPAESATIGSIDRIFTRIGASDDLASGRSTFMVEMTETANILHNAT 692
Query: 387 PEC--------RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFE 437
P RGT T DG +A + E QI +T+FATHY + + P +A
Sbjct: 693 PNSLVLMDEIGRGTSTYDGLSLAWASAEWLANQINAMTLFATHYFELTELPNQIPTLANV 752
Query: 438 YMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
++ +E D+I F++ + G KS+G VA LAG+P+ V+K Q+EA
Sbjct: 753 HLDAVEHG-----DSIAFMHAVQEGAASKSYGLAVAGLAGVPKAVIKNARAKLTQLEA 805
Score = 47.4 bits (111), Expect = 0.022, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 32/55 (58%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGE 260
TP M Q+ +K++N + +LF+++G FYELF+ DA + L S K GE
Sbjct: 15 HTPMMQQYLKLKAENPEILLFYRMGDFYELFYDDAKKASQLLDISLTKRGSSNGE 69
>gi|444426187|ref|ZP_21221611.1| DNA mismatch repair protein MutS [Vibrio campbellii CAIM 519 = NBRC
15631]
gi|444240600|gb|ELU52138.1| DNA mismatch repair protein MutS [Vibrio campbellii CAIM 519 = NBRC
15631]
Length = 853
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 15/114 (13%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A + E QIG +T+FATHY + PN+A ++ +E
Sbjct: 696 RGTSTYDGLSLAWASAEWLATQIGAMTLFATHYFELTELPNLLPNLANVHLDAVEHG--- 752
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
D+I F++ + G KS+G VA LAG+P+ V+K ARH L QL
Sbjct: 753 --DSIAFMHAVQEGAASKSYGLAVAGLAGVPKPVIK---------NARHKLSQL 795
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGE 260
+K TP M Q+ +K++N + +LF+++G FYELF+ DA + L S K GE
Sbjct: 5 QKHTPMMQQYLKLKAENPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGE 61
>gi|365540870|ref|ZP_09366045.1| DNA mismatch repair protein MutS [Vibrio ordalii ATCC 33509]
Length = 862
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 80/177 (45%), Gaps = 16/177 (9%)
Query: 329 QTYLRTQCAHFGCTVIYSEAQ--KKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVT 386
QT L T AH GC V A+ + + S + +S T+ N+ + T
Sbjct: 633 QTALITLLAHIGCYVPAEAARIGSIDRIFTRIGASDDLASGRSTFMVEMTETANILHNAT 692
Query: 387 PEC--------RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFE 437
RGT T DG +A + + QIG LT+FATHY + + P++A
Sbjct: 693 QNSLVLMDEIGRGTSTYDGLSLAWASAQWLASQIGALTLFATHYFELTELPNQLPHLANV 752
Query: 438 YMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++ +E D+I F++ + G KS+G VA LAG+P+ V+K Q+E
Sbjct: 753 HLDAVEHG-----DSIAFMHAVQEGAASKSYGLAVAGLAGVPKAVIKNARAKLSQLE 804
Score = 50.4 bits (119), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGE 260
+ TP M Q+ +K++N D +LF+++G FYELF+ DA + L S K GE
Sbjct: 14 QHTPMMRQYLQLKAENPDILLFYRMGDFYELFYDDAKRASQLLEISLTKRGASAGE 69
>gi|349612127|ref|ZP_08891354.1| DNA mismatch repair protein mutS [Lactobacillus sp. 7_1_47FAA]
gi|348609143|gb|EGY59104.1| DNA mismatch repair protein mutS [Lactobacillus sp. 7_1_47FAA]
Length = 854
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG +A + K+L ++G T+FATHYH + +E ++ ++ ++ +
Sbjct: 690 RGTATYDGMALAGAII-KYLHDKVGAKTLFATHYHELTDLDQELAHLKNIHVGATQENGH 748
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKF 507
++FL+K++PG +S+G +VA+LAG+P V++ EA H L+QL H
Sbjct: 749 -----LIFLHKILPGAADQSYGIHVAQLAGLPTKVLR---------EATHMLKQLEKHSD 794
Query: 508 ASLVKSGEKVDV 519
S E++D+
Sbjct: 795 NQAAFSDEQLDL 806
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
+K TP M Q++ IK Q D LF++VG FYELF DAV GA L + S
Sbjct: 3 EKITPMMEQYYKIKQQYPDAFLFYRVGDFYELFEDDAVKGAKLLELTLTHRS 54
>gi|332685817|ref|YP_004455591.1| DNA mismatch repair protein MutS [Melissococcus plutonius ATCC
35311]
gi|332369826|dbj|BAK20782.1| DNA mismatch repair protein MutS [Melissococcus plutonius ATCC
35311]
Length = 862
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/114 (33%), Positives = 68/114 (59%), Gaps = 6/114 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A+ +E Q + T+F+THYH + + P++ ++ IE K N+
Sbjct: 692 RGTATYDGMALAQAIIEYIHQNVRAKTLFSTHYHELTILDQSLPDLKNVHVGAIE-KNNE 750
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
++FL+K++ G KS+G +VA++AG+P +++ T V +E+ +NL +L
Sbjct: 751 ----VIFLHKIMEGPADKSYGIHVAKIAGLPNGLLERATVVLSSLESENNLTKL 800
Score = 47.4 bits (111), Expect = 0.019, Method: Compositional matrix adjust.
Identities = 21/46 (45%), Positives = 28/46 (60%)
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
K TP M Q+ TIK Q D LF+++G FYE+F+ DA A L +
Sbjct: 6 KNTPMMEQYLTIKEQYSDAFLFYRLGDFYEMFYDDATQAAQLLELT 51
>gi|190359869|sp|A6R7S1.2|MSH3_AJECN RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
Length = 1166
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFE--YMSYIEDKR 446
RGT T+DG IA+ L+ ++ + LT+F THY +++ RE P +M + E
Sbjct: 1018 RGTSTHDGVAIAQAVLDYMVRNLRSLTLFITHYQNLSSMAREFPKGELRNVHMKFTESGM 1077
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
DG D I FLY++ G+ +S+G NVA LA +P+ V++ + ++E
Sbjct: 1078 -DGQD-ITFLYEVGEGVAHRSYGLNVARLANVPDSVLEVARAKSAELE 1123
>gi|406696248|gb|EKC99541.1| hypothetical protein A1Q2_06157 [Trichosporon asahii var. asahii
CBS 8904]
Length = 987
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 51/176 (28%), Positives = 83/176 (47%), Gaps = 10/176 (5%)
Query: 365 SKAKSNHQRVATKKKNVENYVTPEC--------RGTGTNDGCVIARVTLEKFLQIGCLTV 416
S+ KS T+ ++ VTP RGT T DG IA TL + T+
Sbjct: 802 SRGKSTFMVEMTETSDILRTVTPRTLVVLDELGRGTSTFDGVAIAYATLSHLAALDIPTL 861
Query: 417 FATHYHSVARRLREEPNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELA 476
F THY ++R E V+ +M++ E G + I FLYKL G+ SFG A LA
Sbjct: 862 FVTHYPLLSRLEAEYSTVSNWHMAFTEMPGPSGPE-ITFLYKLRRGLADASFGIWCARLA 920
Query: 477 GIPEDVVKFGTTVAFQM-EARHNLRQLFIHKFASLVKSGEKVDVEELQKALESVKS 531
G+P+++++ + +M E + + + K+ + G+ E+L+ A+ V +
Sbjct: 921 GLPDELLETAQEKSERMREETRDRGRAAVGKYLRALVGGDLTAAEKLEGAMAYVDA 976
>gi|375110985|ref|ZP_09757199.1| DNA mismatch repair protein MutS [Alishewanella jeotgali KCTC
22429]
gi|374569017|gb|EHR40186.1| DNA mismatch repair protein MutS [Alishewanella jeotgali KCTC
22429]
Length = 853
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/114 (35%), Positives = 59/114 (51%), Gaps = 15/114 (13%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A ++ Q+ LT+FATHY + ++ P VA ++ +E
Sbjct: 700 RGTSTYDGLSLAWACVDYLANQLQALTLFATHYFELTSLAQQLPAVANVHLDAVEHG--- 756
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
D IVF++ + G KSFG VA+LAG+P V++ AR LRQL
Sbjct: 757 --DGIVFMHHVQEGAASKSFGLQVAQLAGVPRPVIQL---------ARQKLRQL 799
Score = 51.2 bits (121), Expect = 0.001, Method: Compositional matrix adjust.
Identities = 25/62 (40%), Positives = 34/62 (54%)
Query: 199 PPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCT 258
P + L TP M Q+ +KSQ+ +LF+++G FYELF+ DA A L S K
Sbjct: 7 PEQALSNHTPMMQQYLALKSQHPQILLFYRMGDFYELFYEDAKKAAALLDISLTKRGQSA 66
Query: 259 GE 260
GE
Sbjct: 67 GE 68
>gi|298528739|ref|ZP_07016143.1| DNA mismatch repair protein MutS [Desulfonatronospira thiodismutans
ASO3-1]
gi|298512391|gb|EFI36293.1| DNA mismatch repair protein MutS [Desulfonatronospira thiodismutans
ASO3-1]
Length = 877
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 60/107 (56%), Gaps = 7/107 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFLQI--GCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG +A +E+ + G T+FATHYH + + L +E +V Y +++ +
Sbjct: 691 RGTSTYDGLALAWAVVEELARKHEGIRTLFATHYHELTK-LEQEFSVLKNYNIAVKEWKK 749
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
+ IVFL +LVPG KS+G VA LAG+P+ VV + +E
Sbjct: 750 E----IVFLRRLVPGPADKSYGIEVARLAGVPDRVVDRARNILEDLE 792
>gi|190359895|sp|A3LU10.3|MSH3_PICST RecName: Full=DNA mismatch repair protein MSH3; AltName: Full=MutS
protein homolog 3
Length = 1025
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/133 (33%), Positives = 71/133 (53%), Gaps = 6/133 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ--IGCLTVFATHYHSVARRLREEPNVAFEY-MSYIEDKR 446
RGTGT+DG +A L ++ + L +F THY S+ P V Y M + + +
Sbjct: 875 RGTGTSDGIALAYSILRYLIESPLRPLVLFITHYPSLHVLEDSFPTVVTNYHMGFQQIHK 934
Query: 447 NDG-IDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ--LF 503
+D I+FLY LV G+ S+G NVA+LAG+P V+ V+ ++ + ++Q F
Sbjct: 935 DDNDFPEIIFLYNLVKGVINNSYGLNVAKLAGLPVSVISGAHRVSESLKYKVEIQQKEQF 994
Query: 504 IHKFASLVKSGEK 516
KF S+++ +K
Sbjct: 995 TMKFGSILQMLKK 1007
>gi|151945544|gb|EDN63785.1| MutS-like protein [Saccharomyces cerevisiae YJM789]
Length = 964
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/111 (36%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVA-FEYMSYIE---- 443
RGT T DG +A E +IGC +FATH+H + + PN+ +++IE
Sbjct: 771 RGTSTYDGFGLAWAIAEHIASKIGCFALFATHFHELTELSEKLPNIKNMHVVAHIEKNLK 830
Query: 444 DKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++++D D I LYK+ PGI +SFG +VAE+ PE +VK A +++
Sbjct: 831 EQKHDDED-ITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELD 880
>gi|414341138|ref|YP_006982659.1| DNA mismatch repair protein MutS [Gluconobacter oxydans H24]
gi|411026472|gb|AFV99726.1| DNA mismatch repair protein MutS [Gluconobacter oxydans H24]
Length = 864
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 43/116 (37%), Positives = 64/116 (55%), Gaps = 11/116 (9%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA TLE Q+G T+FATH+H + P +A Y +++ R +
Sbjct: 698 RGTATLDGLSIAWATLEALHTQLGSRTIFATHFHELGALTEFLPRLA-PYTMAVKEWRGE 756
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAF-----QMEARHNL 499
++F +++ PG KS+G +VA+LAGIP+ VV + + Q EAR +L
Sbjct: 757 ----VIFQHEVRPGSARKSWGLHVAKLAGIPQSVVNRASRLLATFEREQAEARSSL 808
Score = 46.6 bits (109), Expect = 0.036, Method: Compositional matrix adjust.
Identities = 21/51 (41%), Positives = 27/51 (52%)
Query: 210 MGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGE 260
M QW+ +K Q D +LFF++G FYELF DA A L + GE
Sbjct: 1 MAQWFDLKHQEPDALLFFRMGDFYELFFGDAQAAAMALDIALTARGNHNGE 51
>gi|424042871|ref|ZP_17780538.1| DNA mismatch repair protein MutS [Vibrio cholerae HENC-02]
gi|408885865|gb|EKM24573.1| DNA mismatch repair protein MutS [Vibrio cholerae HENC-02]
Length = 853
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/114 (36%), Positives = 59/114 (51%), Gaps = 15/114 (13%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A + E QIG +T+FATHY + PN+A ++ +E
Sbjct: 696 RGTSTYDGLSLAWASAEWLATQIGAMTLFATHYFELTELPNLLPNLANVHLDAVEHG--- 752
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQL 502
D+I F++ + G KS+G VA LAG+P+ V+K ARH L QL
Sbjct: 753 --DSIAFMHAVQEGAASKSYGLAVAGLAGVPKPVIK---------NARHKLSQL 795
Score = 50.1 bits (118), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGE 260
+K TP M Q+ +K++N + +LF+++G FYELF+ DA + L S K GE
Sbjct: 5 QKHTPMMQQYLKLKAENPEILLFYRMGDFYELFYDDAKRASQLLDISLTKRGASAGE 61
>gi|375088944|ref|ZP_09735281.1| DNA mismatch repair protein MutS [Dolosigranulum pigrum ATCC 51524]
gi|374561111|gb|EHR32460.1| DNA mismatch repair protein MutS [Dolosigranulum pigrum ATCC 51524]
Length = 868
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/109 (34%), Positives = 65/109 (59%), Gaps = 12/109 (11%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSV---ARRLREEPNVAFEYMSYIEDK 445
RGT T DG +A +E +IG T+F+THYH + ++RL + N+ ++ +E++
Sbjct: 694 RGTATYDGMALAEAIIEYVHNRIGAKTLFSTHYHELTELSKRLDKLENI---HVGAVEER 750
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++VFL+K+ PG KS+G VA+LAG+PED++ + + +E
Sbjct: 751 -----GSLVFLHKIKPGPGDKSYGVQVAQLAGLPEDLLDRASMILRDLE 794
Score = 45.4 bits (106), Expect = 0.075, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 24/36 (66%)
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDA 240
K TP M Q+ T+K + D LFF++G FYELF DA
Sbjct: 7 KHTPMMQQYLTMKENHPDAFLFFRLGDFYELFFEDA 42
>gi|336125122|ref|YP_004567170.1| MutS [Vibrio anguillarum 775]
gi|335342845|gb|AEH34128.1| MutS [Vibrio anguillarum 775]
Length = 866
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/177 (29%), Positives = 79/177 (44%), Gaps = 16/177 (9%)
Query: 329 QTYLRTQCAHFGCTVIYSEAQ--KKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVT 386
QT L T AH GC V A + + S + +S T+ N+ + T
Sbjct: 637 QTALITLLAHIGCYVPAEAAHIGSIDRIFTRIGASDDLASGRSTFMVEMTETANILHNAT 696
Query: 387 PEC--------RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFE 437
RGT T DG +A + + QIG LT+FATHY + + P++A
Sbjct: 697 QNSLVLMDEIGRGTSTYDGLSLAWASAQWLASQIGALTLFATHYFELTELPNQLPHLANV 756
Query: 438 YMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++ +E D+I F++ + G KS+G VA LAG+P+ V+K Q+E
Sbjct: 757 HLDAVEHG-----DSIAFMHAVQEGAASKSYGLAVAGLAGVPKTVIKNARAKLSQLE 808
Score = 50.1 bits (118), Expect = 0.003, Method: Compositional matrix adjust.
Identities = 22/56 (39%), Positives = 33/56 (58%)
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGE 260
+ TP M Q+ +K++N D +LF+++G FYELF+ DA + L S K GE
Sbjct: 18 QHTPMMRQYLQLKAENPDILLFYRMGDFYELFYDDAKRASQLLEISLTKRGASAGE 73
>gi|86146340|ref|ZP_01064664.1| DNA mismatch repair protein [Vibrio sp. MED222]
gi|85835819|gb|EAQ53953.1| DNA mismatch repair protein [Vibrio sp. MED222]
Length = 853
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 16/178 (8%)
Query: 329 QTYLRTQCAHFGCTVIYSEAQ--KKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVT 386
QT L AH GC V A + + S + +S T+ N+ + T
Sbjct: 625 QTALIALMAHIGCYVPAESATIGSIDRIFTRIGASDDLASGRSTFMVEMTETANILHNAT 684
Query: 387 PEC--------RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFE 437
P RGT T DG +A + E QI +T+FATHY + + P +A
Sbjct: 685 PNSLVLMDEIGRGTSTYDGLSLAWASAEWLANQINAMTLFATHYFELTELPNQIPTLANV 744
Query: 438 YMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
++ +E D+I F++ + G KS+G VA LAG+P+ V+K Q+EA
Sbjct: 745 HLDAVEHG-----DSIAFMHAVQEGAASKSYGLAVAGLAGVPKAVIKNARAKLTQLEA 797
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGE 260
+K TP M Q+ +K++N + +LF+++G FYELF+ DA + L S K GE
Sbjct: 5 QKHTPMMQQYLKLKAENPEILLFYRMGDFYELFYDDAKKASQLLDISLTKRGSSNGE 61
>gi|402219240|gb|EJT99314.1| DNA mismatch repair protein [Dacryopinax sp. DJM-731 SS1]
Length = 951
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/108 (37%), Positives = 58/108 (53%), Gaps = 3/108 (2%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVA-FEYMSYIEDKRN 447
RGT T DG +A E QI +FATH+H + +E +V ++++ + +
Sbjct: 764 RGTSTYDGFGLAWAISENIATQIHAFCLFATHFHELTALAQEVSHVKNLHVVAHVTQRGS 823
Query: 448 DGIDT-IVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
D I LYK+ PGIC +SFG +VAELA PE VVK A ++E
Sbjct: 824 SNHDRDITLLYKVEPGICDQSFGIHVAELANFPESVVKLAKRKADELE 871
>gi|357030937|ref|ZP_09092881.1| DNA mismatch repair protein MutS [Gluconobacter morbifer G707]
gi|356415631|gb|EHH69274.1| DNA mismatch repair protein MutS [Gluconobacter morbifer G707]
Length = 863
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/106 (37%), Positives = 57/106 (53%), Gaps = 6/106 (5%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA TLE Q+G T+FATH+H + P +A Y + + R +
Sbjct: 698 RGTATLDGLAIAWATLEALHTQLGSRTIFATHFHELGALTEFLPRLA-PYTMAVREWRGE 756
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++F +++ PG KS+G +VA+LAGIP VV + Q E
Sbjct: 757 ----VIFQHEVRPGAARKSWGLHVAKLAGIPPSVVSRAGRLLTQFE 798
Score = 43.9 bits (102), Expect = 0.22, Method: Compositional matrix adjust.
Identities = 20/51 (39%), Positives = 27/51 (52%)
Query: 210 MGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGE 260
M QW+ +K Q + +LFF++G FYELF DA A L + GE
Sbjct: 1 MAQWFELKHQEPEALLFFRMGDFYELFFGDAQAAAMALDIALTARGNHDGE 51
>gi|312875171|ref|ZP_07735184.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF 2053A-b]
gi|311089278|gb|EFQ47709.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF 2053A-b]
Length = 854
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG +A + K+L ++G T+FATHYH + +E ++ ++ ++ +
Sbjct: 690 RGTATYDGMALAGAII-KYLHDKVGAKTLFATHYHELTDLDQELAHLKNIHVGATQENGH 748
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKF 507
++FL+K++PG +S+G +VA+LAG+P V++ EA H L+QL H
Sbjct: 749 -----LIFLHKILPGAADQSYGIHVAQLAGLPTKVLR---------EATHMLKQLEKHSD 794
Query: 508 ASLVKSGEKVDV 519
S E++D+
Sbjct: 795 NQAAFSDEQLDL 806
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
+K TP M Q++ IK Q D LF++VG FYELF DAV GA L + S
Sbjct: 3 EKITPMMEQYYKIKQQYPDAFLFYRVGDFYELFEDDAVKGAKLLELTLTHRS 54
>gi|47210390|emb|CAF91023.1| unnamed protein product [Tetraodon nigroviridis]
Length = 958
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 34/95 (35%), Positives = 54/95 (56%), Gaps = 6/95 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A + +IGC +FATH+H + ++P V +++ + +
Sbjct: 782 RGTSTYDGFGLAWAISQHVASRIGCFCLFATHFHELTALAAQQPAVHNLHVTALTSQ--- 838
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
D + LY++ PG+C +SFG +VAE+AG P VV
Sbjct: 839 --DALTMLYRVRPGVCDQSFGIHVAEMAGFPPAVV 871
>gi|345571284|gb|EGX54098.1| hypothetical protein AOL_s00004g131 [Arthrobotrys oligospora ATCC
24927]
Length = 1266
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/115 (34%), Positives = 56/115 (48%), Gaps = 8/115 (6%)
Query: 390 RGTGTNDGCVIARVTLEKF-LQIGCLTVFATHYHSVARRLREEPNVAFEYMSYI--EDKR 446
RGT + DG IA+ L IG + FATHY S+A ++ P + M + +D+R
Sbjct: 1110 RGTSSYDGVAIAQAVLHHVATHIGAIGYFATHYGSLATEFQDHPEIQPRRMKILVDDDQR 1169
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
N I FLYKL G+ KSFG A + GI + ++ A E LR+
Sbjct: 1170 N-----ITFLYKLEEGVAEKSFGMYCAAMCGIDKKIIDKAEEAAAMFEHTSRLRE 1219
Score = 66.6 bits (161), Expect = 4e-08, Method: Compositional matrix adjust.
Identities = 31/70 (44%), Positives = 41/70 (58%)
Query: 178 ILDADRRSPKHPDYNPKTLYVPPEFLKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFH 237
I D D P +++P+TL++P K +P Q+W IK FD V+FFK GKFYEL+
Sbjct: 354 IQDKDGNRPGDEEHDPRTLFIPKYAWNKFSPFEKQYWEIKQDLFDTVVFFKKGKFYELYE 413
Query: 238 MDAVIGADEL 247
DA IG E
Sbjct: 414 NDATIGHQEF 423
Score = 45.4 bits (106), Expect = 0.085, Method: Compositional matrix adjust.
Identities = 21/54 (38%), Positives = 35/54 (64%), Gaps = 1/54 (1%)
Query: 279 FPDMSELLKYFENAFDHKEASSAGNIIPKAGVDKEYDEVMDEIKSIEKEIQTYL 332
PD+ LL+ + AF+ KEA G +IP+ GV++++D+ D + IEK++Q L
Sbjct: 810 MPDLDGLLEPWNTAFNRKEAKD-GKLIPEHGVEQDFDDSQDNVDQIEKDLQDLL 862
>gi|448534841|ref|ZP_21621938.1| DNA mismatch repair protein MutS [Halorubrum hochstenium ATCC
700873]
gi|445703992|gb|ELZ55912.1| DNA mismatch repair protein MutS [Halorubrum hochstenium ATCC
700873]
Length = 981
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/96 (41%), Positives = 52/96 (54%), Gaps = 8/96 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG IAR E FL ++G +FATHYH + E V + + R
Sbjct: 742 RGTATTDGRAIARAAAE-FLHDELGATALFATHYHELTDLADERERV---FNLHFTATRE 797
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVV 483
DG + FL+++VPG S+G VAELAG+P VV
Sbjct: 798 DG--DVTFLHRVVPGASSSSYGVEVAELAGVPGPVV 831
>gi|24584320|ref|NP_523565.2| spellchecker1, isoform A [Drosophila melanogaster]
gi|386769639|ref|NP_001246031.1| spellchecker1, isoform D [Drosophila melanogaster]
gi|83304687|sp|P43248.4|MSH2_DROME RecName: Full=DNA mismatch repair protein spellchecker 1
gi|22946491|gb|AAF53392.2| spellchecker1, isoform A [Drosophila melanogaster]
gi|383291497|gb|AFH03705.1| spellchecker1, isoform D [Drosophila melanogaster]
Length = 917
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 373 RVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREE 431
R AT K V + RGT T +GC IA E + C T+FATH+H + +
Sbjct: 735 RTATDKSLV--IIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAETL 792
Query: 432 PNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAF 491
V +M+ + D D LY++ G+ KSFG VA LA PE VV+ V
Sbjct: 793 STVKNCHMAAVADA-----DDFTLLYQVRSGVMEKSFGIQVARLANFPEHVVQNAQEVYN 847
Query: 492 QMEARHNLRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQTKKDLEDL 543
+ E H +Q K +K +E++Q A++ + + + ++EDL
Sbjct: 848 EFEDEHVDKQ----------KKEDKALLEKIQVAIQQLSTAGNNVDINVEDL 889
>gi|325913769|ref|ZP_08176130.1| DNA mismatch repair protein MutS [Lactobacillus iners UPII 60-B]
gi|325476969|gb|EGC80120.1| DNA mismatch repair protein MutS [Lactobacillus iners UPII 60-B]
Length = 854
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG +A + K+L ++G T+FATHYH + +E ++ ++ ++ +
Sbjct: 690 RGTATYDGMALAGAII-KYLHDKVGAKTLFATHYHELTDLDQELAHLKNIHVGATQENGH 748
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKF 507
++FL+K++PG +S+G +VA+LAG+P V++ EA H L+QL H
Sbjct: 749 -----LIFLHKILPGAADQSYGIHVAQLAGLPTKVLR---------EATHMLKQLEKHSD 794
Query: 508 ASLVKSGEKVDV 519
S E++D+
Sbjct: 795 NQAAFSDEQLDL 806
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
+K TP M Q++ IK Q D LF++VG FYELF DAV GA L + S
Sbjct: 3 EKITPMMEQYYKIKQQYPDAFLFYRVGDFYELFEDDAVKGAKLLELTLTHRS 54
>gi|154275824|ref|XP_001538757.1| hypothetical protein HCAG_06362 [Ajellomyces capsulatus NAm1]
gi|150413830|gb|EDN09195.1| hypothetical protein HCAG_06362 [Ajellomyces capsulatus NAm1]
Length = 1132
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFE--YMSYIEDKR 446
RGT T+DG IA+ L+ ++ + LT+F THY +++ RE P +M + E
Sbjct: 984 RGTSTHDGVAIAQAVLDYMVRNLRSLTLFITHYQNLSSMAREFPKGELRNVHMKFTESGM 1043
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
DG D I FLY++ G+ +S+G NVA LA +P+ V++ + ++E
Sbjct: 1044 -DGQD-ITFLYEVGEGVAHRSYGLNVARLANVPDSVLEVARAKSAELE 1089
>gi|401623755|gb|EJS41843.1| msh2p [Saccharomyces arboricola H-6]
Length = 964
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/111 (36%), Positives = 62/111 (55%), Gaps = 7/111 (6%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVA-FEYMSYIE---- 443
RGT T DG +A E +IGC +FATH+H + + PNV +++IE
Sbjct: 771 RGTSTYDGFGLAWAIAEHIAGKIGCFALFATHFHELTELSEKLPNVKNMHVVAHIEKDTN 830
Query: 444 DKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
++++D D I LYK+ PGI +SFG +VAE+ PE +VK A +++
Sbjct: 831 EQKHDDED-ITLLYKVEPGISDQSFGIHVAEVVQFPEKIVKMAKRKANELD 880
>gi|240278385|gb|EER41891.1| DNA mismatch repair protein [Ajellomyces capsulatus H143]
Length = 1114
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 38/108 (35%), Positives = 62/108 (57%), Gaps = 5/108 (4%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFE--YMSYIEDKR 446
RGT T+DG IA+ L+ ++ + LT+F THY +++ RE P +M + E
Sbjct: 966 RGTSTHDGVAIAQAVLDYMVRNLRSLTLFITHYQNLSSMAREFPKGELRNVHMKFTESGM 1025
Query: 447 NDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
DG D I FLY++ G+ +S+G NVA LA +P+ V++ + ++E
Sbjct: 1026 -DGQD-ITFLYEVGEGVAHRSYGLNVARLANVPDSVLEVARAKSAELE 1071
>gi|225871419|ref|YP_002747366.1| DNA mismatch repair protein MutS [Streptococcus equi subsp. equi
4047]
gi|254766638|sp|C0MAS5.1|MUTS_STRE4 RecName: Full=DNA mismatch repair protein MutS
gi|225700823|emb|CAW95529.1| DNA mismatch repair protein MutS [Streptococcus equi subsp. equi
4047]
Length = 851
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 65/116 (56%), Gaps = 12/116 (10%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSV---ARRLREEPNVAFEYMSYIEDK 445
RGT T DG +A+ +E ++G T+FATHYH + + +L + NV ++
Sbjct: 685 RGTATYDGMALAQSIIEYIHDRVGAKTMFATHYHELTELSTKLTKLVNV------HVATL 738
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
DG + FL+K+ G KS+G +VA +AG+PED++ TV ++EA+ R+
Sbjct: 739 EKDG--NVTFLHKIAEGPADKSYGIHVARIAGLPEDLLARADTVLTKLEAQSQARE 792
>gi|312872874|ref|ZP_07732936.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF
2062A-h1]
gi|311091608|gb|EFQ49990.1| DNA mismatch repair protein MutS [Lactobacillus iners LEAF
2062A-h1]
Length = 854
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG +A + K+L ++G T+FATHYH + +E ++ ++ ++ +
Sbjct: 690 RGTATYDGMALAGAII-KYLHDKVGAKTLFATHYHELTDLDQELAHLKNIHVGATQENGH 748
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKF 507
++FL+K++PG +S+G +VA+LAG+P V++ EA H L+QL H
Sbjct: 749 -----LIFLHKILPGAADQSYGIHVAQLAGLPTKVLR---------EATHMLKQLEKHSD 794
Query: 508 ASLVKSGEKVDV 519
S E++D+
Sbjct: 795 NQAAFSDEQLDL 806
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
+K TP M Q++ IK Q D LF++VG FYELF DAV GA L + S
Sbjct: 3 EKITPMMEQYYKIKQQYPDAFLFYRVGDFYELFEDDAVKGAKLLELTLTHRS 54
>gi|309805987|ref|ZP_07700013.1| DNA mismatch repair protein MutS [Lactobacillus iners LactinV
03V1-b]
gi|308167590|gb|EFO69743.1| DNA mismatch repair protein MutS [Lactobacillus iners LactinV
03V1-b]
Length = 854
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG +A + K+L ++G T+FATHYH + +E ++ ++ ++ +
Sbjct: 690 RGTATYDGMALAGAII-KYLHDKVGAKTLFATHYHELTDLDQELAHLKNIHVGATQENGH 748
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKF 507
++FL+K++PG +S+G +VA+LAG+P V++ EA H L+QL H
Sbjct: 749 -----LIFLHKILPGAADQSYGIHVAQLAGLPTKVLR---------EATHMLKQLEKHSD 794
Query: 508 ASLVKSGEKVDV 519
S E++D+
Sbjct: 795 NQAAFSDEQLDL 806
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
+K TP M Q++ IK Q D LF++VG FYELF DAV GA L + S
Sbjct: 3 EKITPMMEQYYKIKQQYPDAFLFYRVGDFYELFEDDAVKGAKLLELTLTHRS 54
>gi|307718809|ref|YP_003874341.1| DNA mismatch repair protein MutS [Spirochaeta thermophila DSM 6192]
gi|306532534|gb|ADN02068.1| DNA mismatch repair protein MutS [Spirochaeta thermophila DSM 6192]
Length = 867
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 8/96 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGTGT DG IA +E L+ + T+FATH+H + + P V M+ ED+
Sbjct: 703 RGTGTIDGLSIAWAVVEYLLERVKARTLFATHFHELTKI--THPAVFNLSMAVREDR--- 757
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
D IVFL ++ G KS+G +VA LAG+PE VVK
Sbjct: 758 --DGIVFLKRVRAGAAEKSYGIHVARLAGVPEAVVK 791
Score = 45.4 bits (106), Expect = 0.079, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGC 257
QTP M Q+W K + + +LFF++G FYE+F DA + L + + +G
Sbjct: 5 QTPMMQQYWEFKKRYREEILFFRLGDFYEMFADDAKEASRILGITLTQRNGI 56
>gi|307184088|gb|EFN70623.1| DNA mismatch repair protein Msh2 [Camponotus floridanus]
Length = 895
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 36/99 (36%), Positives = 55/99 (55%), Gaps = 8/99 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMS-YIEDKRN 447
RGT T +GC IA E + I +FATH+H + R E P + +++ +ED +
Sbjct: 722 RGTSTYEGCGIAWSIAEHLAKDIRSYCLFATHFHEITRLAEEVPTIQNHHVTALVEDNK- 780
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFG 486
+ LY + PGIC +SFG +VA++A P DV++F
Sbjct: 781 -----LTLLYTVKPGICDQSFGLHVAKMANFPPDVIEFA 814
>gi|218710549|ref|YP_002418170.1| DNA mismatch repair protein MutS [Vibrio splendidus LGP32]
gi|254766647|sp|B7VK59.1|MUTS_VIBSL RecName: Full=DNA mismatch repair protein MutS
gi|218323568|emb|CAV19791.1| DNA mismatch repair protein mutS [Vibrio splendidus LGP32]
Length = 853
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/178 (29%), Positives = 78/178 (43%), Gaps = 16/178 (8%)
Query: 329 QTYLRTQCAHFGCTVIYSEAQ--KKQKKYVLEVPSKYASKAKSNHQRVATKKKNVENYVT 386
QT L AH GC V A + + S + +S T+ N+ + T
Sbjct: 625 QTALIALMAHIGCYVPAESATIGSIDRIFTRIGASDDLASGRSTFMVEMTETANILHNAT 684
Query: 387 PEC--------RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFE 437
P RGT T DG +A + E QI +T+FATHY + + P +A
Sbjct: 685 PNSLVLMDEIGRGTSTYDGLSLAWASAEWLANQINAMTLFATHYFELTELPNQIPTLANV 744
Query: 438 YMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
++ +E D+I F++ + G KS+G VA LAG+P+ V+K Q+EA
Sbjct: 745 HLDAVEHG-----DSIAFMHAVQEGAASKSYGLAVAGLAGVPKAVIKNARAKLTQLEA 797
Score = 49.3 bits (116), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 22/57 (38%), Positives = 34/57 (59%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTGE 260
+K TP M Q+ +K++N + +LF+++G FYELF+ DA + L S K GE
Sbjct: 5 QKHTPMMQQYLKLKAENPEILLFYRMGDFYELFYDDAKKASQLLDISLTKRGSSNGE 61
>gi|442804336|ref|YP_007372485.1| DNA mismatch repair protein MutS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
gi|442740186|gb|AGC67875.1| DNA mismatch repair protein MutS [Clostridium stercorarium subsp.
stercorarium DSM 8532]
Length = 870
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 46/134 (34%), Positives = 67/134 (50%), Gaps = 22/134 (16%)
Query: 376 TKKKNVENYVTPEC--------RGTGTNDGCVIARVTLEKF---LQIGCLTVFATHYHSV 424
T+ N+ N TP RGT T+DG IA +E ++GC T+FATHYH +
Sbjct: 680 TEVANILNNATPRSLLILDEIGRGTSTHDGLAIAWSVIEYINDKSRLGCRTLFATHYHEL 739
Query: 425 AR---RLREEPNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPED 481
+L N E KR D I+FL K++PG +S+G VA LAG+PE
Sbjct: 740 TELEDKLTGIKNCCIEV-----KKRGD---EIIFLRKIIPGGADQSYGIEVAGLAGVPEL 791
Query: 482 VVKFGTTVAFQMEA 495
V++ + +++A
Sbjct: 792 VIERAKHILNELDA 805
Score = 49.7 bits (117), Expect = 0.004, Method: Compositional matrix adjust.
Identities = 23/46 (50%), Positives = 29/46 (63%)
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
K TP M Q+ K Q DC+LFF++G FYELF DA I + EL +
Sbjct: 2 KLTPMMQQYIETKKQYQDCLLFFRLGDFYELFFEDAEIASRELEIA 47
>gi|325911928|ref|ZP_08174331.1| DNA mismatch repair protein MutS [Lactobacillus iners UPII 143-D]
gi|325476230|gb|EGC79393.1| DNA mismatch repair protein MutS [Lactobacillus iners UPII 143-D]
Length = 854
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 42/132 (31%), Positives = 73/132 (55%), Gaps = 17/132 (12%)
Query: 390 RGTGTNDGCVIARVTLEKFL--QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRN 447
RGT T DG +A + K+L ++G T+FATHYH + +E ++ ++ ++ +
Sbjct: 690 RGTATYDGMALAGAII-KYLHDKVGAKTLFATHYHELTDLDQELAHLKNIHVGATQENGH 748
Query: 448 DGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQLFIHKF 507
++FL+K++PG +S+G +VA+LAG+P V++ EA H L+QL H
Sbjct: 749 -----LIFLHKILPGAADQSYGIHVAQLAGLPTKVLR---------EATHMLKQLEKHSD 794
Query: 508 ASLVKSGEKVDV 519
S E++D+
Sbjct: 795 NQAAFSDEQLDL 806
Score = 49.7 bits (117), Expect = 0.005, Method: Compositional matrix adjust.
Identities = 25/52 (48%), Positives = 31/52 (59%)
Query: 204 KKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
+K TP M Q++ IK Q D LF++VG FYELF DAV GA L + S
Sbjct: 3 EKITPMMEQYYKIKQQYPDAFLFYRVGDFYELFEDDAVKGAKLLELTLTHRS 54
>gi|311249783|ref|XP_003123799.1| PREDICTED: DNA mismatch repair protein Msh3 [Sus scrofa]
Length = 1094
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 47/146 (32%), Positives = 77/146 (52%), Gaps = 14/146 (9%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLRE-EPNVAFEYMSYI----E 443
RGT T+DG IA TLE F++ + LT+F THY V + V +M ++ E
Sbjct: 937 RGTSTHDGIAIAYATLEHFIRDVKSLTLFVTHYPPVCELEKSYSQQVGNYHMGFLVNEDE 996
Query: 444 DKRNDGI-----DTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHN 498
K++ G D + FLY++ G +S+G NVA+LA +P +++K + + ++E N
Sbjct: 997 SKQDPGEEDKVPDFVTFLYQITRGSAARSYGLNVAKLADVPGEILKKAASKSKELEGLVN 1056
Query: 499 LRQLFIHKFASLVKSGEKVDVEELQK 524
++ + FA L D ++LQK
Sbjct: 1057 RKRKRLKSFAKLWTIN---DAKDLQK 1079
>gi|113204903|gb|ABI34185.1| RE64551p [Drosophila melanogaster]
Length = 917
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 52/172 (30%), Positives = 79/172 (45%), Gaps = 18/172 (10%)
Query: 373 RVATKKKNVENYVTPECRGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREE 431
R AT K V + RGT T +GC IA E + C T+FATH+H + +
Sbjct: 735 RTATDKSLV--IIDELGRGTSTYEGCGIAWSIAEHLAKETKCFTLFATHFHEITKLAETL 792
Query: 432 PNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAF 491
V +M+ + D D LY++ G+ KSFG VA LA PE VV+ V
Sbjct: 793 STVKNCHMAAVADA-----DDFTLLYQVRSGVMEKSFGIQVARLANFPEHVVQNAQEVYN 847
Query: 492 QMEARHNLRQLFIHKFASLVKSGEKVDVEELQKALESVKSFESQTKKDLEDL 543
+ E H +Q K +K +E++Q A++ + + + ++EDL
Sbjct: 848 EFEDEHVDKQ----------KKEDKALLEKIQVAIQQLSTAGNNVDINVEDL 889
>gi|367047841|ref|XP_003654300.1| hypothetical protein THITE_2117183 [Thielavia terrestris NRRL 8126]
gi|347001563|gb|AEO67964.1| hypothetical protein THITE_2117183 [Thielavia terrestris NRRL 8126]
Length = 925
Score = 67.0 bits (162), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 55/184 (29%), Positives = 82/184 (44%), Gaps = 19/184 (10%)
Query: 330 TYLR-----TQCAHFGCTVIYSEAQKKQKKYVLEVPSKYASKAKSNHQRVA--TKKKNVE 382
TY+R A GC V SEA+ +L S+ K +A + N+
Sbjct: 667 TYIRQIGVIALMAQIGCFVPCSEAELTIFDSILARVGASDSQLKGVSTFMAEMLETANIL 726
Query: 383 NYVTPEC--------RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPN 433
T E RGT T DG +A E + +IGC +FATH+H + + P
Sbjct: 727 KSATAESLIIIDELGRGTSTYDGFGLAWAISEHIVKEIGCFALFATHFHELTALADQYPQ 786
Query: 434 VA-FEYMSYI--EDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVA 490
V ++I D ++ + LYK+ PG+C +SFG +VAEL P+ VV+ A
Sbjct: 787 VRNLHVTAHIGGADSKSKARREVTLLYKVEPGVCDQSFGIHVAELVRFPDKVVRMAKRKA 846
Query: 491 FQME 494
++E
Sbjct: 847 DELE 850
>gi|345303113|ref|YP_004825015.1| DNA mismatch repair protein mutS [Rhodothermus marinus
SG0.5JP17-172]
gi|345112346|gb|AEN73178.1| DNA mismatch repair protein mutS [Rhodothermus marinus
SG0.5JP17-172]
Length = 898
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 64/129 (49%), Gaps = 16/129 (12%)
Query: 380 NVENYVTPEC--------RGTGTNDGCVIARVTLEKFLQ---IGCLTVFATHYHSVARRL 428
N+ N TP RGT T DG IA +E + + T+FATHYH +
Sbjct: 694 NILNNATPRSLILLDEVGRGTSTFDGLSIAWALVEYLHETPSVAARTLFATHYHELNELA 753
Query: 429 REEPNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTT 488
P V + +E+ +DG ++FL+KLVPG S+G VA +AG+PE V+
Sbjct: 754 ERFPRVK-NFRVQVEE--HDG--RVIFLHKLVPGGADHSYGIEVARMAGLPEPVIARARE 808
Query: 489 VAFQMEARH 497
+ +EA+H
Sbjct: 809 ILRHLEAQH 817
Score = 46.2 bits (108), Expect = 0.053, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
QTP M Q++ IKS+ + +L F++G FYE F DA I + L + K S
Sbjct: 12 QTPLMRQYYKIKSRYPNAILLFRMGDFYETFDEDAHIVSRVLGITLTKRS 61
>gi|386346893|ref|YP_006045142.1| DNA mismatch repair protein mutS [Spirochaeta thermophila DSM 6578]
gi|339411860|gb|AEJ61425.1| DNA mismatch repair protein mutS [Spirochaeta thermophila DSM 6578]
Length = 867
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 41/96 (42%), Positives = 55/96 (57%), Gaps = 8/96 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFLQ-IGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGTGT DG IA +E L+ + T+FATH+H + + P V M+ ED+
Sbjct: 703 RGTGTIDGLSIAWAVVEYLLERVKARTLFATHFHELTKI--THPAVFNLSMAVREDR--- 757
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVK 484
D IVFL ++ G KS+G +VA LAG+PE VVK
Sbjct: 758 --DGIVFLKRVRAGAAEKSYGIHVARLAGVPEAVVK 791
Score = 45.4 bits (106), Expect = 0.081, Method: Compositional matrix adjust.
Identities = 19/52 (36%), Positives = 30/52 (57%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGC 257
QTP M Q+W K + + +LFF++G FYE+F DA + L + + +G
Sbjct: 5 QTPMMQQYWEFKKRYREEILFFRLGDFYEMFADDAKEASRILGITLTQRNGI 56
>gi|336109982|gb|AEI16759.1| mutS protein 6 [Sphenodon punctatus]
Length = 283
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 27/38 (71%), Positives = 32/38 (84%)
Query: 216 IKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMK 253
+KSQNFDCV+F+KVGKFYEL+HMDAV G EL +MK
Sbjct: 2 LKSQNFDCVIFYKVGKFYELYHMDAVTGVSELGLVFMK 39
>gi|408789864|ref|ZP_11201505.1| DNA mismatch repair protein MutS [Lactobacillus florum 2F]
gi|408520886|gb|EKK20908.1| DNA mismatch repair protein MutS [Lactobacillus florum 2F]
Length = 856
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 35/106 (33%), Positives = 58/106 (54%), Gaps = 6/106 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG +A+ +E + T+F+THYH + P + ++ +E
Sbjct: 685 RGTSTYDGVALAQAIIEYIHNHVHAKTLFSTHYHELTDLANHLPQLQNVHVGAVEKD--- 741
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQME 494
D +VFL+K++PG KS+G NVA+LAG+P +++ + Q+E
Sbjct: 742 --DQLVFLHKILPGPADKSYGINVAKLAGLPSPLLQRAQVILNQLE 785
Score = 46.2 bits (108), Expect = 0.044, Method: Compositional matrix adjust.
Identities = 21/48 (43%), Positives = 29/48 (60%)
Query: 203 LKKQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACS 250
+ +T M Q+ IK Q D LF+++G FYELF+ DAV GA L +
Sbjct: 1 MAAKTAMMAQYQKIKDQYPDAFLFYRIGDFYELFNDDAVKGAQLLELT 48
>gi|20089412|ref|NP_615487.1| DNA mismatch repair protein MutS [Methanosarcina acetivorans C2A]
gi|44888230|sp|Q8TTB4.1|MUTS_METAC RecName: Full=DNA mismatch repair protein MutS
gi|19914310|gb|AAM03967.1| DNA mismatch repair protein [Methanosarcina acetivorans C2A]
Length = 900
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/116 (34%), Positives = 63/116 (54%), Gaps = 10/116 (8%)
Query: 390 RGTGTNDGCVIARVTLEKFL----QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDK 445
RGT T DG IA+ +E FL ++G +FATHYH + + V +++ ED
Sbjct: 720 RGTSTYDGYSIAKAVVE-FLHNRGKVGIRALFATHYHQLTALEEKLKRVKNYHIAVKEDG 778
Query: 446 RNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEARHNLRQ 501
+VFL K+VPG +S+G +VA LAG+PE V++ + ++E + L +
Sbjct: 779 HE-----LVFLRKIVPGATDRSYGIHVARLAGVPEKVIERANEILKELERENVLEE 829
>gi|268317098|ref|YP_003290817.1| DNA mismatch repair protein MutS [Rhodothermus marinus DSM 4252]
gi|262334632|gb|ACY48429.1| DNA mismatch repair protein MutS [Rhodothermus marinus DSM 4252]
Length = 898
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 44/129 (34%), Positives = 64/129 (49%), Gaps = 16/129 (12%)
Query: 380 NVENYVTPEC--------RGTGTNDGCVIARVTLEKFLQ---IGCLTVFATHYHSVARRL 428
N+ N TP RGT T DG IA +E + + T+FATHYH +
Sbjct: 694 NILNNATPRSLILLDEVGRGTSTFDGLSIAWALVEYLHETPSVAARTLFATHYHELNELA 753
Query: 429 REEPNVAFEYMSYIEDKRNDGIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTT 488
P V + +E+ +DG ++FL+KLVPG S+G VA +AG+PE V+
Sbjct: 754 ERFPRVK-NFRVQVEE--HDG--RVIFLHKLVPGGADHSYGIEVARMAGLPEPVIARARE 808
Query: 489 VAFQMEARH 497
+ +EA+H
Sbjct: 809 ILRHLEAQH 817
Score = 45.8 bits (107), Expect = 0.054, Method: Compositional matrix adjust.
Identities = 21/50 (42%), Positives = 30/50 (60%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKES 255
QTP M Q++ IKS+ + +L F++G FYE F DA I + L + K S
Sbjct: 12 QTPLMRQYYKIKSRYPNAILLFRMGDFYETFDEDAHIVSRVLGITLTKRS 61
>gi|320537296|ref|ZP_08037252.1| DNA mismatch repair protein MutS [Treponema phagedenis F0421]
gi|320145866|gb|EFW37526.1| DNA mismatch repair protein MutS [Treponema phagedenis F0421]
Length = 882
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/101 (39%), Positives = 57/101 (56%), Gaps = 8/101 (7%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IAR E L +IG T+FATHYH ++ E P + + +E +
Sbjct: 716 RGTSTEDGLSIARAVSEYLLNKIGAKTLFATHYHELS--YLEHPRLKNFCLDVLETE--- 770
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTV 489
+ IVFL K++ G+ S+G +VA LAG+PE V+ T+
Sbjct: 771 --EKIVFLKKVIEGVSNNSYGIHVARLAGVPESVLARAQTL 809
Score = 48.5 bits (114), Expect = 0.010, Method: Compositional matrix adjust.
Identities = 19/36 (52%), Positives = 28/36 (77%)
Query: 206 QTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAV 241
QTP M Q+ IK+++ D VLFF++G FYE+F+ DA+
Sbjct: 5 QTPMMRQYQEIKAEHRDAVLFFRLGDFYEMFNEDAI 40
>gi|316931934|ref|YP_004106916.1| DNA mismatch repair protein MutS [Rhodopseudomonas palustris DX-1]
gi|315599648|gb|ADU42183.1| DNA mismatch repair protein MutS [Rhodopseudomonas palustris DX-1]
Length = 907
Score = 66.6 bits (161), Expect = 3e-08, Method: Compositional matrix adjust.
Identities = 40/107 (37%), Positives = 60/107 (56%), Gaps = 6/107 (5%)
Query: 390 RGTGTNDGCVIARVTLEKFL-QIGCLTVFATHYHSVARRLREEPNVAFEYMSYIEDKRND 448
RGT T DG IA +E Q C T+FATHYH + + P + F +++ R +
Sbjct: 739 RGTATFDGLSIAWAAIEHLHEQNRCRTLFATHYHELTALSAKLPRL-FNATVRVKEWRGE 797
Query: 449 GIDTIVFLYKLVPGICPKSFGFNVAELAGIPEDVVKFGTTVAFQMEA 495
+VFL++++PG +S+G VA+LAG+P VV TV ++EA
Sbjct: 798 ----VVFLHEVLPGSADRSYGIQVAKLAGLPASVVARAKTVLAKLEA 840
Score = 44.7 bits (104), Expect = 0.13, Method: Compositional matrix adjust.
Identities = 21/55 (38%), Positives = 30/55 (54%)
Query: 205 KQTPCMGQWWTIKSQNFDCVLFFKVGKFYELFHMDAVIGADELACSYMKESGCTG 259
K +P M Q+ IK+ N +LF+++G FYELF DA I + L + K G
Sbjct: 22 KMSPMMEQYHEIKAANPGLLLFYRMGDFYELFFEDAEIASRALGITLTKRGKHLG 76
Database: nr
Posted date: Mar 3, 2013 10:45 PM
Number of letters in database: 999,999,864
Number of sequences in database: 2,912,245
Database: /local_scratch/syshi//blastdatabase/nr.01
Posted date: Mar 3, 2013 10:52 PM
Number of letters in database: 999,999,666
Number of sequences in database: 2,912,720
Database: /local_scratch/syshi//blastdatabase/nr.02
Posted date: Mar 3, 2013 10:58 PM
Number of letters in database: 999,999,938
Number of sequences in database: 3,014,250
Database: /local_scratch/syshi//blastdatabase/nr.03
Posted date: Mar 3, 2013 11:03 PM
Number of letters in database: 999,999,780
Number of sequences in database: 2,805,020
Database: /local_scratch/syshi//blastdatabase/nr.04
Posted date: Mar 3, 2013 11:08 PM
Number of letters in database: 999,999,551
Number of sequences in database: 2,816,253
Database: /local_scratch/syshi//blastdatabase/nr.05
Posted date: Mar 3, 2013 11:13 PM
Number of letters in database: 999,999,897
Number of sequences in database: 2,981,387
Database: /local_scratch/syshi//blastdatabase/nr.06
Posted date: Mar 3, 2013 11:18 PM
Number of letters in database: 999,999,649
Number of sequences in database: 2,911,476
Database: /local_scratch/syshi//blastdatabase/nr.07
Posted date: Mar 3, 2013 11:24 PM
Number of letters in database: 999,999,452
Number of sequences in database: 2,920,260
Database: /local_scratch/syshi//blastdatabase/nr.08
Posted date: Mar 3, 2013 11:25 PM
Number of letters in database: 64,230,274
Number of sequences in database: 189,558
Lambda K H
0.311 0.128 0.375
Lambda K H
0.267 0.0410 0.140
Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 9,514,627,126
Number of Sequences: 23463169
Number of extensions: 426264495
Number of successful extensions: 2133032
Number of sequences better than 100.0: 1000
Number of HSP's better than 100.0 without gapping: 5779
Number of HSP's successfully gapped in prelim test: 17293
Number of HSP's that attempted gapping in prelim test: 1974042
Number of HSP's gapped (non-prelim): 125263
length of query: 577
length of database: 8,064,228,071
effective HSP length: 148
effective length of query: 429
effective length of database: 8,886,646,355
effective search space: 3812371286295
effective search space used: 3812371286295
T: 11
A: 40
X1: 16 ( 7.2 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 42 (21.8 bits)
S2: 80 (35.4 bits)