Query psy13265
Match_columns 245
No_of_seqs 114 out of 1114
Neff 9.5
Searched_HMMs 29240
Date Sat Aug 17 00:21:51 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13265.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13265hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 1egd_A Medium chain acyl-COA d 100.0 8.3E-49 2.8E-53 341.1 26.9 242 2-243 107-395 (396)
2 4hr3_A Putative acyl-COA dehyd 100.0 5.6E-49 1.9E-53 344.2 25.9 241 2-244 120-414 (415)
3 2vig_A Short-chain specific ac 100.0 2.4E-48 8.2E-53 337.7 27.9 240 2-244 98-384 (391)
4 2d29_A Acyl-COA dehydrogenase; 100.0 4.2E-48 1.4E-52 335.8 28.7 240 2-241 99-386 (387)
5 1ukw_A Acyl-COA dehydrogenase; 100.0 1.9E-48 6.5E-53 337.0 26.3 236 2-240 96-378 (379)
6 3pfd_A Acyl-COA dehydrogenase; 100.0 1E-48 3.5E-53 340.2 23.9 236 2-240 110-393 (393)
7 1buc_A Butyryl-COA dehydrogena 100.0 3.7E-48 1.3E-52 335.7 26.2 236 2-240 100-383 (383)
8 3r7k_A Probable acyl COA dehyd 100.0 8.6E-48 2.9E-52 335.4 27.1 233 2-238 122-401 (403)
9 1ivh_A Isovaleryl-COA dehydrog 100.0 3.6E-48 1.2E-52 336.9 24.6 240 2-242 107-393 (394)
10 2jif_A Short/branched chain sp 100.0 7.3E-48 2.5E-52 335.9 26.3 237 2-242 121-404 (404)
11 3nf4_A Acyl-COA dehydrogenase; 100.0 7.4E-48 2.5E-52 334.2 24.9 233 2-239 107-386 (387)
12 1rx0_A Acyl-COA dehydrogenase 100.0 1.3E-47 4.6E-52 333.2 26.5 235 2-240 110-392 (393)
13 3sf6_A Glutaryl-COA dehydrogen 100.0 9.5E-48 3.2E-52 335.1 25.7 233 2-242 122-400 (403)
14 2dvl_A Acyl-COA dehydrogenase; 100.0 1.6E-47 5.4E-52 330.6 26.7 231 2-240 95-372 (372)
15 2pg0_A Acyl-COA dehydrogenase; 100.0 1.6E-47 5.3E-52 332.0 26.7 236 2-238 101-383 (385)
16 3p4t_A Putative acyl-COA dehyd 100.0 1.8E-47 6.2E-52 333.4 27.0 233 2-238 119-399 (403)
17 3ii9_A Glutaryl-COA dehydrogen 100.0 3.3E-48 1.1E-52 337.3 22.2 237 2-242 111-393 (396)
18 2ix5_A Acyl-coenzyme A oxidase 100.0 1.8E-47 6.1E-52 336.1 26.1 234 2-241 146-425 (436)
19 3swo_A Glutaryl-COA dehydrogen 100.0 2.1E-47 7.1E-52 332.6 25.8 233 2-242 117-395 (399)
20 3owa_A Acyl-COA dehydrogenase; 100.0 3.9E-47 1.3E-51 344.6 26.2 236 2-244 125-428 (597)
21 2eba_A Putative glutaryl-COA d 100.0 1.2E-46 4.2E-51 326.3 27.2 233 2-241 103-382 (385)
22 2wbi_A Acyl-COA dehydrogenase 100.0 9.4E-47 3.2E-51 331.2 24.5 242 2-244 126-422 (428)
23 1r2j_A Protein FKBI; polyketid 100.0 5.2E-47 1.8E-51 326.6 22.3 231 2-241 85-364 (366)
24 1siq_A GCD, glutaryl-COA dehyd 100.0 2.9E-46 1E-50 324.7 26.2 233 2-241 105-385 (392)
25 3mpi_A Glutaryl-COA dehydrogen 100.0 1.3E-46 4.5E-51 327.4 23.0 235 2-241 100-384 (397)
26 2z1q_A Acyl-COA dehydrogenase; 100.0 3E-46 1E-50 338.5 21.7 234 2-242 120-416 (577)
27 2uxw_A VERY-long-chain specifi 100.0 6.9E-45 2.4E-49 330.6 24.1 239 2-240 140-430 (607)
28 3mkh_A Nitroalkane oxidase; ox 100.0 4.7E-44 1.6E-48 315.0 22.2 239 2-241 105-417 (438)
29 3djl_A Protein AIDB; alpha hel 100.0 2.9E-43 9.9E-48 315.7 22.5 229 3-241 145-442 (541)
30 2c12_A Nitroalkane oxidase; ox 100.0 1.4E-42 4.7E-47 305.7 24.1 238 2-239 103-418 (439)
31 2ddh_A Acyl-COA oxidase; beta 100.0 8.4E-43 2.9E-47 319.5 23.1 240 2-244 110-441 (661)
32 1w07_A Acyl-COA oxidase; oxido 100.0 4.8E-42 1.6E-46 314.8 25.3 240 2-244 109-444 (659)
33 3mxl_A Nitrososynthase; flavin 100.0 5E-41 1.7E-45 292.0 18.8 224 5-241 106-394 (395)
34 3m9v_A FAD-dependent oxidoredu 100.0 2.9E-40 1E-44 290.9 23.1 226 4-242 116-406 (439)
35 2rfq_A 3-HSA hydroxylase, oxyg 100.0 7.3E-39 2.5E-43 278.3 22.3 223 2-242 95-388 (394)
36 2or0_A Hydroxylase; APC7385, r 100.0 8.6E-39 2.9E-43 279.6 20.8 223 2-242 108-403 (414)
37 2jbr_A P-hydroxyphenylacetate 100.0 2.1E-38 7.1E-43 277.8 21.7 223 2-242 123-416 (422)
38 2yyk_A 4-hydroxyphenylacetate- 100.0 3.7E-33 1.3E-37 247.1 22.9 219 8-238 122-422 (481)
39 1u8v_A Gamma-aminobutyrate met 100.0 2.3E-33 7.7E-38 248.9 21.5 227 5-239 122-444 (490)
40 3hwc_A Chlorophenol-4-monooxyg 100.0 2.2E-27 7.5E-32 210.4 23.4 188 9-206 132-391 (515)
41 4g5e_A 2,4,6-trichlorophenol 4 99.9 1E-22 3.5E-27 180.8 20.0 188 10-205 134-391 (517)
42 3owa_A Acyl-COA dehydrogenase; 96.0 0.12 4.2E-06 46.7 13.2 108 132-241 482-592 (597)
43 2uxw_A VERY-long-chain specifi 85.2 15 0.0005 33.1 12.7 68 132-199 506-574 (607)
44 2z1q_A Acyl-COA dehydrogenase; 83.5 24 0.00082 31.4 15.8 100 134-241 470-570 (577)
No 1
>1egd_A Medium chain acyl-COA dehydrogenase; flavoprotein, electron transfer; HET: FAD; 2.40A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 1egc_A* 1ege_A* 1t9g_A* 2a1t_A* 1udy_A* 3mdd_A* 3mde_A*
Probab=100.00 E-value=8.3e-49 Score=341.12 Aligned_cols=242 Identities=73% Similarity=1.171 Sum_probs=225.0
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
+|+.+|+++||++|||++.+|+.++++++|||+.|||..++.+++++++|||+|||+|.|+|++.+||+++|++++++++
T Consensus 107 ~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~ 186 (396)
T 1egd_A 107 PIIIAGNDQQKKKYLGRMTEEPLMCAYCVTEPGAGSDVAGIKTKAEKKGDEYIINGQKMWITNGGKANWYFLLARSDPDP 186 (396)
T ss_dssp HHHHHCCHHHHHHHHHHHHHSCCCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEETTTTCSEEEEEEECCCCT
T ss_pred HHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcchhhCeeEEEEeCCEEEEEEEEEcccCCcccCEEEEEEEeCCCC
Confidence 47789999999999999999999999999999999999999999999999999999999999999999999999987542
Q ss_pred CCCCCCCeEEEEEeCCCCCcccchh-----------------------------------------------hhhhhHHH
Q psy13265 82 KCPASKAFTGFIVERDTPGLTPGRK-----------------------------------------------VAAGAVGL 114 (245)
Q Consensus 82 ~~~~~~~~~~f~V~~~~~Gv~~~~~-----------------------------------------------~~~~~lG~ 114 (245)
+.+++.++++|+||++.|||++.+. +++.++|+
T Consensus 187 ~~~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~ 266 (396)
T 1egd_A 187 KAPANKAFTGFIVEADTPGIQIGRKELNMGQRCSDTRGIVFEDVKVPKENVLIGDGAGFKVAMGAFDKERPVVAAGAVGL 266 (396)
T ss_dssp TSCGGGTEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGBSSSTTBHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred CCCCCCCeEEEEEeCCCCCeeeCCccccccccCCCeeEEEECcEEECHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHHH
Confidence 1111268999999999999998543 56788999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHH
Q psy13265 115 AQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRRNTLYASVAKALAADVANKCATD 194 (245)
Q Consensus 115 ~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~ 194 (245)
++++++.+++|++.|++||+|+.++|.+|++|+++.+.++++++++++++..++.+.+....++++|.++++.+.++++.
T Consensus 267 a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~ 346 (396)
T 1egd_A 267 AQRALDEATKYALERKTFGKLLVEHQAISFMLAEMAMKVELARMSYQRAAWEVDSGRRNTYYASIAKAFAGDIANQLATD 346 (396)
T ss_dssp HHHHHHHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999887666678999999999999999999
Q ss_pred HHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHHHhh
Q psy13265 195 AVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIEKAK 243 (245)
Q Consensus 195 ~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~~~ 243 (245)
+++++||.||.+++|++|+|||++...+++|++++++..|++.+|+.++
T Consensus 347 a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~~~~ 395 (396)
T 1egd_A 347 AVQILGGNGFNTEYPVEKLMRDAKIYQIYGGTSQIQRLIVAREHIDKYK 395 (396)
T ss_dssp HHHHHGGGTTBTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHTTC
T ss_pred HHHHhCcccccCCChHHHHHHHhhCeeecCCHHHHHHHHHHHHHHhhcC
Confidence 9999999999999999999999999999999999999999999998875
No 2
>4hr3_A Putative acyl-COA dehydrogenase; ssgcid, seattle structural genomics center for infectious DI niaid; HET: FAD; 1.80A {Mycobacterium abscessus}
Probab=100.00 E-value=5.6e-49 Score=344.16 Aligned_cols=241 Identities=30% Similarity=0.459 Sum_probs=225.0
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCC-CCCCCCCceeEEEEeCCeEEEeeeeecccCCCc--ccEEEEEEEeC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPG-AGSDVNGVKTKAVKKGDEWILNGQKMWITNGGV--ANWYFVLARTN 78 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~-~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~--ad~~lv~a~~~ 78 (245)
+|..+|+++||++|||++.+|++++++++|||+ .|||+..+.|++++++|||+|||+|.|+|++.+ ||+++|+++++
T Consensus 120 ~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~~gsd~~~~~t~A~~~g~g~~lnG~K~~is~a~~~~Ad~~~v~a~~~ 199 (415)
T 4hr3_A 120 VLHRYGSQEQKEVWLEPLLEGDIRSAFCMTEPDVASSDATNMAATAVVEGDEVVINGRKWWSTGVGHPDCKVIIFMGLTD 199 (415)
T ss_dssp HHHHHCCHHHHHHTHHHHHTTSCEEEEECCCTTSCTTSGGGCCCEEEEETTEEEEEEEEEEEETTTSTTEEEEEEEEECC
T ss_pred HHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCchhhCeeEEEEECCEEEEeeEEeeECCCCCCCCCEEEEEEEeC
Confidence 367799999999999999999999999999999 999999999999999999999999999999966 99999999987
Q ss_pred CCCCCCCCCCeEEEEEeCCCCCcccchh-------------------------------------------------hhh
Q psy13265 79 PDPKCPASKAFTGFIVERDTPGLTPGRK-------------------------------------------------VAA 109 (245)
Q Consensus 79 ~~~~~~~~~~~~~f~V~~~~~Gv~~~~~-------------------------------------------------~~~ 109 (245)
+++ ++++++++|+||++.|||++.+. +++
T Consensus 200 ~~~--~~~~g~~~flV~~~~pGv~v~~~~~~~g~r~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa 277 (415)
T 4hr3_A 200 PNA--HRYARHSMVLVPMDTPGITVERMLPTMGFYDEPGGHGVVSFDNVRLPADAFIAGPGKGFEIAQGRLGPGRVHHAM 277 (415)
T ss_dssp TTS--CTTSSEEEEEEETTSTTEEEEEECCBTTBCCTTTCEEEEEEEEEEEEGGGBSSCTTCHHHHHHHHCSHHHHHHHH
T ss_pred CCC--CCCCceEEEEEEcCCCceEecCCCCccccCCCCCCeeEEEEccEEECHHHcCCCCCchHHHHHHHHhHHHHHHHH
Confidence 653 25678999999999999988552 567
Q ss_pred hhHHHHHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--CCCchhHHHHHHHHHHHH
Q psy13265 110 GAVGLAQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDL--GRRNTLYASVAKALAADV 187 (245)
Q Consensus 110 ~~lG~~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~--~~~~~~~~~~~K~~~~~~ 187 (245)
.++|+++++++.+++|++.|++||+|+.++|.+|++++++...++++++++++++..++. ..+....++++|.++++.
T Consensus 278 ~~~G~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~aK~~a~e~ 357 (415)
T 4hr3_A 278 RLIGLAEVALEHACRRGLDRTAFGKPLVNLGGNRERIADARIAINQTRLLVLHAAWLLDTVGIMGALSAVSEIKVAAPNM 357 (415)
T ss_dssp HHHHHHHHHHHHHHHHHHHCEETTEEGGGSTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCGGGCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhcCccCCCcHHHhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCchHHHHHHHHHHHHHH
Confidence 899999999999999999999999999999999999999999999999999999999987 345566899999999999
Q ss_pred HHHHHHHHHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHHHhhc
Q psy13265 188 ANKCATDAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIEKAKN 244 (245)
Q Consensus 188 ~~~~~~~~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~~~~ 244 (245)
+.++++.+++++||.||.+++|++|+|||+++..+++|++++++..|++.+|+++++
T Consensus 358 a~~v~~~a~qi~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~l~~~~~ 414 (415)
T 4hr3_A 358 AQQVIDMAIQIHGGGGLSNDFPLAAAWVNARALRLADGPDEVHRGVVARIELAKYAN 414 (415)
T ss_dssp HHHHHHHHHHHTGGGGGSSSSSHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHhCccccCCCchHHHHHHHhhhheeecCcHHHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999999999999876
No 3
>2vig_A Short-chain specific acyl-COA dehydrogenase,; fatty acid metabolism, FAD, polymorphism, flavoprotein, mitochondrion, disease mutation; HET: FAD COS; 1.9A {Homo sapiens} PDB: 1jqi_A*
Probab=100.00 E-value=2.4e-48 Score=337.70 Aligned_cols=240 Identities=37% Similarity=0.623 Sum_probs=225.2
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
+|..+|+++||++|||++.+|+.++++++|||+.|||+..+.|++++++|||+|||+|.|+|++.+||+++|++++++++
T Consensus 98 ~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~ 177 (391)
T 2vig_A 98 PILKFGSKEQKQAWVTPFTSGDKIGCFALSEPGNGSDAGAASTTARAEGDSWVLNGTKAWITNAWEASAAVVFASTDRAL 177 (391)
T ss_dssp HHHHHCCHHHHHHHTGGGSSSSCCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECCSSS
T ss_pred HHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCCCcccceeEEEEeCCEEEEeeEEEeecCCCcCCEEEEEEEeCCCC
Confidence 46779999999999999999999999999999999999999999999999999999999999999999999999986432
Q ss_pred CCCCCCCeEEEEEeCCCCCcccchh-----------------------------------------------hhhhhHHH
Q psy13265 82 KCPASKAFTGFIVERDTPGLTPGRK-----------------------------------------------VAAGAVGL 114 (245)
Q Consensus 82 ~~~~~~~~~~f~V~~~~~Gv~~~~~-----------------------------------------------~~~~~lG~ 114 (245)
+++++++|+||++.|||++.+. +++.++|+
T Consensus 178 ---~~~g~~~flV~~~~pGv~v~~~~~~~g~r~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~ 254 (391)
T 2vig_A 178 ---QNKSISAFLVPMPTPGLTLGKKEDKLGIRGSSTANLIFEDCRIPKDSILGEPGMGFKIAMQTLDMGRIGIASQALGI 254 (391)
T ss_dssp ---TTSCEEEEEEESSCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCceEEEEEeCCCCCeEecCccccccCCCCCeeEEEECcEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4568999999999999988654 57788999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHH
Q psy13265 115 AQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRRNTLYASVAKALAADVANKCATD 194 (245)
Q Consensus 115 ~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~ 194 (245)
++++++.+++|++.|++||+|+.++|.+|++++++.+.++++++++++++..++.+.+....++++|.++++.+.++++.
T Consensus 255 a~~al~~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~ 334 (391)
T 2vig_A 255 AQTALDCAVNYAENRMAFGAPLTKLQVIQFKLADMALALESARLLTWRAAMLKDNKKPFIKEAAMAKLAASEAATAISHQ 334 (391)
T ss_dssp HHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccCCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999877666678999999999999999999
Q ss_pred HHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHHHhhc
Q psy13265 195 AVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIEKAKN 244 (245)
Q Consensus 195 ~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~~~~ 244 (245)
+++++||.||.+++|++|+|||+++..+++|++++++..|++.+++.++.
T Consensus 335 a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~G~~~~~~~~ia~~~l~~~~~ 384 (391)
T 2vig_A 335 AIQILGGMGYVTEMPAERHYRDARITEIYEGTSEIQRLVIAGHLLRSYRS 384 (391)
T ss_dssp HHHHHGGGGGBTTSSHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHC
T ss_pred HHHhhCCeEecCCChHHHHHHHhhcceeecCHHHHHHHHHHHHHHhhccc
Confidence 99999999999999999999999999999999999999999999988753
No 4
>2d29_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project protein structural and functional analyses; HET: FAD; 1.65A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1 PDB: 1ws9_A 2cx9_A*
Probab=100.00 E-value=4.2e-48 Score=335.78 Aligned_cols=240 Identities=45% Similarity=0.691 Sum_probs=222.8
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
+|..+|+++||++|||++++|+.++++++|||+.|||+..+.|++++++|||+|||+|.|+|++.+||+++|++++++++
T Consensus 99 ~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~ 178 (387)
T 2d29_A 99 HILLAGSEAQKEAFLPKLASGEALGAWGLTEPGSGSDAAALKTKAEKVEGGWRLNGTKQFITQGSVAGVYVVMARTDPPP 178 (387)
T ss_dssp HHHHHCCHHHHHHHHHHHHTSSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECSCCS
T ss_pred HHHHhCCHHHHHHHHHHHhCCCceEEEEeCCCCCCCCHhhCceEEEEeCCEEEEEeEEeccCCCCcCCEEEEEEEeCCcc
Confidence 46779999999999999999999999999999999999999999999999999999999999999999999999986431
Q ss_pred C-CCCCCCeEEEEEeCCCCCcccchh-----------------------------------------------hhhhhHH
Q psy13265 82 K-CPASKAFTGFIVERDTPGLTPGRK-----------------------------------------------VAAGAVG 113 (245)
Q Consensus 82 ~-~~~~~~~~~f~V~~~~~Gv~~~~~-----------------------------------------------~~~~~lG 113 (245)
+ .++++++++|+||++.|||++.+. +++.++|
T Consensus 179 ~~~~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G 258 (387)
T 2d29_A 179 SPERKHQGISAFAFFRPERGLKVGRKEEKLGLTASDTAQLILEDLFVPEEALLGERGKGFYDVLRVLDGGRIGIAAMAVG 258 (387)
T ss_dssp CGGGTTTTEEEEEEECCSSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTBHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCCCCCeEEEEEeCCCCCeeccCcccccCCCCCCeeEEEEeeEEECHHHcCCCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 0 013458999999999999998643 5778899
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHH
Q psy13265 114 LAQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRRNTLYASVAKALAADVANKCAT 193 (245)
Q Consensus 114 ~~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~ 193 (245)
+++++++.+++|++.|++||+|+.++|.+|++++++.++++++++++++++..++.+.+....++++|.++++.+.++++
T Consensus 259 ~a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~ 338 (387)
T 2d29_A 259 LGQAALDYALAYAKGREAFGRPIAEFEGVSFKLAEAATELEAARLLYLKAAELKDAGRPFTLEAAQAKLFASEAAVKACD 338 (387)
T ss_dssp HHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCccCCcchHhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988766667899999999999999999
Q ss_pred HHHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHHH
Q psy13265 194 DAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIEK 241 (245)
Q Consensus 194 ~~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~ 241 (245)
.+++++||.||.+++|++|+|||++...+++|++++++..|++.+|+.
T Consensus 339 ~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~G~~~i~~~~ia~~~l~~ 386 (387)
T 2d29_A 339 EAIQILGGYGYVKDYPVERYWRDARLTRIGEGTSEILKLVIARRLLEA 386 (387)
T ss_dssp HHHHHHGGGGGSTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHT
T ss_pred HHHHhcCCeecCCCChHHHHHHHhhCccccCCHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999999864
No 5
>1ukw_A Acyl-COA dehydrogenase; oxidoreductase, riken structural genomics/proteomics initiative, RSGI, structural genomics; HET: FAD; 2.40A {Thermus thermophilus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.9e-48 Score=337.04 Aligned_cols=236 Identities=49% Similarity=0.833 Sum_probs=222.0
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
+|..+|+++||++|||++.+|+.++++++|||+.|||..++.+++++++|||+|||+|.|+|++.+||+++|++++++++
T Consensus 96 ~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~ 175 (379)
T 1ukw_A 96 PVLLAGTEEQKERFLRPLTEKPALAAFALSEPGNGSDAAALKTRAIRQGDHYVLNGTKMWISNGGEAEWVVVFATVNPEL 175 (379)
T ss_dssp HHHHHCCHHHHHHHHGGGTSSSCEEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTEEEEEEEEESCGGG
T ss_pred HHHHhCCHHHHHHHHHHHhCCCceEEEEecCCCCCcChhhCeEEEEEeCCEEEEEEEEecccCCCcCCEEEEEEEcCCCC
Confidence 46779999999999999999999999999999999999999999999999999999999999999999999999986432
Q ss_pred CCCCCCCeEEEEEeCCCCCcccchh-----------------------------------------------hhhhhHHH
Q psy13265 82 KCPASKAFTGFIVERDTPGLTPGRK-----------------------------------------------VAAGAVGL 114 (245)
Q Consensus 82 ~~~~~~~~~~f~V~~~~~Gv~~~~~-----------------------------------------------~~~~~lG~ 114 (245)
+++++++|+||++.|||++.+. +++.++|+
T Consensus 176 ---~~~g~~~flV~~~~~Gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~ 252 (379)
T 1ukw_A 176 ---RHKGVVALVVERGTPGFKAIKIHGKMGQRASGTYELVFEDVKVPVENRLGEEGEGFKIAMQTLNKTRIPVAAGSVGV 252 (379)
T ss_dssp ---GGGGEEEEEEETTCTTEEEEECCCCSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCceEEEEEeCCCCCeEecCccccccCCCCCeeEEEEeeEEecHHhcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567999999999999988653 56788999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHH
Q psy13265 115 AQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRRNTLYASVAKALAADVANKCATD 194 (245)
Q Consensus 115 ~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~ 194 (245)
++++++.+++|++.|++||+|+.++|.+|++++++...++++++++++++..++.+.+....++++|.++++.+.++++.
T Consensus 253 a~~al~~~~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK~~a~~~a~~~~~~ 332 (379)
T 1ukw_A 253 ARRALDEARKYAKEREAFGEPIANFQAIQFKLVDMLIGIETARMYTYYAAWLADQGLPHAHASAIAKAYASEIAFEAANQ 332 (379)
T ss_dssp HHHHHHHHHHHHHHCBSSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999877666678999999999999999999
Q ss_pred HHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHH
Q psy13265 195 AVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIE 240 (245)
Q Consensus 195 ~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~ 240 (245)
+++++||.||.+++|++|+|||++...+++|++++++..|++.+|+
T Consensus 333 a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 378 (379)
T 1ukw_A 333 AIQIHGGYGYVREFPVEKLLRDVKLNQIYEGTNEIQRLIIARHILA 378 (379)
T ss_dssp HHHHHGGGGGSTTSSHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHC
T ss_pred HHHhhCCeecCCCChHHHHHHHhcCceecCCHHHHHHHHHHHHHhc
Confidence 9999999999999999999999999999999999999999999874
No 6
>3pfd_A Acyl-COA dehydrogenase; structural genomics, seattle structural genomics center for infectious disease, ssgcid; HET: FDA; 2.10A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=1e-48 Score=340.20 Aligned_cols=236 Identities=48% Similarity=0.809 Sum_probs=220.3
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
+|..+|+++||++|||++.+|+.++++++|||+.|||+..+.|++++++|||+|||+|.|+|++.+||+++|++++++++
T Consensus 110 ~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~ 189 (393)
T 3pfd_A 110 GLILRGSEELKKQVLPAVASGEAMASYALSEREAGSDAASMRTRAVADGDDWILNGSKCWITNGGKSTWYTVMAVTDPDK 189 (393)
T ss_dssp HHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEESCGGG
T ss_pred HHHHhCCHHHHHHHHHHHhCCCceeEEEEcCCCCCCCcccCeeEEEEcCCEEEEeeEEEEecCCcccCEEEEEEEeCCCC
Confidence 46779999999999999999999999999999999999999999999999999999999999999999999999987542
Q ss_pred CCCCCCCeEEEEEeCCCCCcccchh-----------------------------------------------hhhhhHHH
Q psy13265 82 KCPASKAFTGFIVERDTPGLTPGRK-----------------------------------------------VAAGAVGL 114 (245)
Q Consensus 82 ~~~~~~~~~~f~V~~~~~Gv~~~~~-----------------------------------------------~~~~~lG~ 114 (245)
++.++++|+||++.|||++.+. +++.++|+
T Consensus 190 ---~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~ 266 (393)
T 3pfd_A 190 ---GANGISAFMVHKDDEGFTVGPKERKLGIKGSPTTELYFENCRIPGDRIIGEPGTGFKTALATLDHTRPTIGAQAVGI 266 (393)
T ss_dssp ---GGGGEEEEEEETTSTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHTTHHHHHHHHHHH
T ss_pred ---CCCceEEEEEECCCCCeEecCCCCcccCCCCCceEEEEccEEEcHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 5578999999999999998443 56789999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-chhHHHHHHHHHHHHHHHHHH
Q psy13265 115 AQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRR-NTLYASVAKALAADVANKCAT 193 (245)
Q Consensus 115 ~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~-~~~~~~~~K~~~~~~~~~~~~ 193 (245)
++++++.+++|++.|++||+|+.++|.+|++++++...++++++++++++..++.+.+ ....++++|.++++.+.++++
T Consensus 267 a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~aK~~a~~~a~~~~~ 346 (393)
T 3pfd_A 267 AQGALDAAIAYTKERKQFGRPVSDNQGVQFMLADMAMKIEAARLMVYSAAARAERGEGDLGFISAASKCFASDVAMEVTT 346 (393)
T ss_dssp HHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC----CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCccCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999987665 556789999999999999999
Q ss_pred HHHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHH
Q psy13265 194 DAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIE 240 (245)
Q Consensus 194 ~~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~ 240 (245)
.+++++||.||.+++|++|+|||+++..+++|++++++..|++.+|+
T Consensus 347 ~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~ll~ 393 (393)
T 3pfd_A 347 DAVQLFGGYGYTQDFPVERMMRDAKITQIYEGTNQIQRVVMSRALLR 393 (393)
T ss_dssp HHHHHTGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHTC
T ss_pred HHHHHhchhhccCCChHHHHHHhhcceeeecCHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999999874
No 7
>1buc_A Butyryl-COA dehydrogenase; acyl-COA dehydrogenase short-chain acyl-COA dehydrogenase, flavoprotein, oxidoreductase; HET: CAA FAD; 2.50A {Megasphaera elsdenii} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=3.7e-48 Score=335.70 Aligned_cols=236 Identities=44% Similarity=0.713 Sum_probs=221.9
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEe-CCeEEEeeeeecccCCCcccEEEEEEEeCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKK-GDEWILNGQKMWITNGGVANWYFVLARTNPD 80 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~-~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~ 80 (245)
+|..+|+++||++|||++.+|+.++++++|||+.|||+..+.++++++ +|||+|||+|.|+|++.+||+++|+++++++
T Consensus 100 ~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~ 179 (383)
T 1buc_A 100 PIWQFGTEAQKEKFLVPLVEGTKLGAFGLTEPNAGTDASGQQTIATKNDDGTYTLNGSKIFITNGGAADIYIVFAMTDKS 179 (383)
T ss_dssp HHHHHCCHHHHHHTHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEETTTTCSEEEEEEESCSS
T ss_pred HHHHhCCHHHHHHHHHHHhCCCeeEEEEeCCCCCCCChhhCEeEEEEcCCCEEEEEEEEeccCCCCcCCEEEEEEEeCCC
Confidence 466799999999999999999999999999999999999999999999 9999999999999999999999999998754
Q ss_pred CCCCCCCCeEEEEEeCCCCCcccchh-----------------------------------------------hhhhhHH
Q psy13265 81 PKCPASKAFTGFIVERDTPGLTPGRK-----------------------------------------------VAAGAVG 113 (245)
Q Consensus 81 ~~~~~~~~~~~f~V~~~~~Gv~~~~~-----------------------------------------------~~~~~lG 113 (245)
+ +++++++|+||++.|||++.+. +++.++|
T Consensus 180 ~---~~~g~~~flV~~~~~Gv~v~~~~~~~g~~~~~~~~v~f~~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G 256 (383)
T 1buc_A 180 K---GNHGITAFILEDGTPGFTYGKKEDKMGIHTSQTMELVFQDVKVPAENMLGEEGKGFKIAMMTLDGGRIGVAAQALG 256 (383)
T ss_dssp S---STTSEEEEEEETTCTTEEEEEECCCSSCTTSCEEEEEEEEEEECGGGEESCTTBHHHHHHHHHHHHHHHHHHHHHH
T ss_pred C---CCCceEEEEEECCCCCeEecCccccccccCCceeEEEEccEEeCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 2 4568999999999999998653 5678999
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHH
Q psy13265 114 LAQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRRNTLYASVAKALAADVANKCAT 193 (245)
Q Consensus 114 ~~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~ 193 (245)
+++++++.+++|++.|++||+|+.++|.+|++++++...++++++++++++..++.+.+....++++|.++++.+.++++
T Consensus 257 ~a~~al~~~~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~ 336 (383)
T 1buc_A 257 IAEAALADAVEYSKQRVQFGKPLCKFQSISFKLADMKMQIEAARNLVYKAACKKQEGKPFTVDAAIAKRVASDVAMRVTT 336 (383)
T ss_dssp HHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHhCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988766677899999999999999999
Q ss_pred HHHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHH
Q psy13265 194 DAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIE 240 (245)
Q Consensus 194 ~~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~ 240 (245)
.+++++||.||.+++|++|+|||++...+++|++++++..|++.+|+
T Consensus 337 ~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 383 (383)
T 1buc_A 337 EAVQIFGGYGYSEEYPVARHMRDAKITQIYEGTNEVQLMVTGGALLR 383 (383)
T ss_dssp HHHHHHGGGGGSTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHTC
T ss_pred HHHHhcCCeecCCCChHHHHHHHhhcccccCCHHHHHHHHHHHHHhC
Confidence 99999999999999999999999999999999999999999998763
No 8
>3r7k_A Probable acyl COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FDA; 2.50A {Mycobacterium abscessus}
Probab=100.00 E-value=8.6e-48 Score=335.42 Aligned_cols=233 Identities=30% Similarity=0.483 Sum_probs=221.1
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
+|..+|+++||++|||++++|++++++++|||+.|||+..+.|++++++|||+|||+|.|+|++.+||+++|+++++++
T Consensus 122 ~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~~~- 200 (403)
T 3r7k_A 122 HIAANGSDALIERYVRPTLAGKMIGSLGVTEPGAGSDVANLRTRAVREGDTYVVNGAKTFITSGVRADFVTTAVRTGGP- 200 (403)
T ss_dssp HHHHHCCHHHHHHHHHHHHTTSCCEEEECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEETTTTCSEEEEEEECSSS-
T ss_pred HHHHhCCHHHHHHHHHHHhCCCeeEEEEecCCCCCCChhhceEEEEEECCEEEEEEEEEcccCCccCCEEEEEEEcCCC-
Confidence 4677999999999999999999999999999999999999999999999999999999999999999999999998753
Q ss_pred CCCCCCCeEEEEEeCCCCCcccchh-----------------------------------------------hhhhhHHH
Q psy13265 82 KCPASKAFTGFIVERDTPGLTPGRK-----------------------------------------------VAAGAVGL 114 (245)
Q Consensus 82 ~~~~~~~~~~f~V~~~~~Gv~~~~~-----------------------------------------------~~~~~lG~ 114 (245)
++.++++|+||++.|||++.+. +++.++|+
T Consensus 201 ---~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~ 277 (403)
T 3r7k_A 201 ---GYGGVSLLVIDKNSPGFEVSRRLDKMGWRCSDTAELSFVDVRVPADNLVGAENSGFLQIMQQFQAERLGIAVQAYAT 277 (403)
T ss_dssp ---SGGGEEEEEEETTCTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ---CCCceEEEEEeCCCCCeEecCcccccCCCCCCceEEEEeeEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3468999999999999998553 57889999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHH
Q psy13265 115 AQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRRNTLYASVAKALAADVANKCATD 194 (245)
Q Consensus 115 ~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~ 194 (245)
++++++.+++|+++|++||+|+.++|.+|++++++...++++++++++++..++.+.+....++++|.++++.+.++++.
T Consensus 278 a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~v~~~ 357 (403)
T 3r7k_A 278 AGRALDLAKSWARERETFGRPLTGRQIIRHKLAEMARQVDVACTYTRAVMQRWLAGEDVVAEVSMAKNTAVYACDYVVNE 357 (403)
T ss_dssp HHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHcCccCCCchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987777778999999999999999999
Q ss_pred HHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHH
Q psy13265 195 AVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAI 238 (245)
Q Consensus 195 ~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~ 238 (245)
+++++||.||.+++|++|+|||+++..+++|++++++..|++.+
T Consensus 358 a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l 401 (403)
T 3r7k_A 358 AVQIFGGMGYMRESEIERHYRDCRILGIGGGTNEIMNEVIAKRI 401 (403)
T ss_dssp HHHHHGGGGGBTTSHHHHHHHHHTTTTTTTSCHHHHHHHHHHHH
T ss_pred HHHhcCCeEecCCchHHHHHHHhCcceeecCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999875
No 9
>1ivh_A Isovaleryl-COA dehydrogenase; oxidoreductase, acyl-COA dehydrogenase, flavoprotein, isovaleric acidemia; HET: FAD COS; 2.60A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=3.6e-48 Score=336.94 Aligned_cols=240 Identities=40% Similarity=0.628 Sum_probs=223.4
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
+|..+|+++||++|||++.+|++++++++|||+.|||...+.+++++++|||+|||+|.|+|++.+||+++|+++++++.
T Consensus 107 ~l~~~g~~~q~~~~l~~l~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~vs~~~~Ad~~~v~ar~~~~~ 186 (394)
T 1ivh_A 107 QLVRNGNEAQKEKYLPKLISGEYIGALAMSEPNAGSDVVSMKLKAEKKGNHYILNGNKFWITNGPDADVLIVYAKTDLAA 186 (394)
T ss_dssp HHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECSSEEEEEEEEEEEETGGGCSEEEEEEESCTTC
T ss_pred HHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCcCcccceEEEEEcCCEEEEEeEEEeeCCCCcCCEEEEEEEeCCcc
Confidence 46779999999999999999999999999999999999999999999999999999999999999999999999986431
Q ss_pred CCCCCCCeEEEEEeCCCCCcccchh-----------------------------------------------hhhhhHHH
Q psy13265 82 KCPASKAFTGFIVERDTPGLTPGRK-----------------------------------------------VAAGAVGL 114 (245)
Q Consensus 82 ~~~~~~~~~~f~V~~~~~Gv~~~~~-----------------------------------------------~~~~~lG~ 114 (245)
. +++.++++|+||++.|||++.+. +++.++|+
T Consensus 187 ~-~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~ 265 (394)
T 1ivh_A 187 V-PASRGITAFIVEKGMPGFSTSKKLDKLGMRGSNTCELIFEDCKIPAANILGHENKGVYVLMSGLDLERLVLAGGPLGL 265 (394)
T ss_dssp S-SGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHTHHHHHH
T ss_pred c-CCCCCeEEEEEeCCCCCeEeccccccccCCCCCeeEEEECcEEEcHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 0 13467899999999999988664 56789999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHH
Q psy13265 115 AQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRRNTLYASVAKALAADVANKCATD 194 (245)
Q Consensus 115 ~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~ 194 (245)
++++++.+++|++.|++||+|+.++|.+|++++++...++++++++++++..++.+.+....++++|.++++.+.++++.
T Consensus 266 a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~ 345 (394)
T 1ivh_A 266 MQAVLDHTIPYLHVREAFGQKIGHFQLMQGKMADMYTRLMACRQYVYNVAKACDEGHCTAKDCAGVILYSAECATQVALD 345 (394)
T ss_dssp HHHHHHHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCeeCCcchhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCcchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999887666678999999999999999999
Q ss_pred HHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHHHh
Q psy13265 195 AVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIEKA 242 (245)
Q Consensus 195 ~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~~ 242 (245)
+++++||.||.+++|++|+|||++...+++|++++++..|++.+++.+
T Consensus 346 a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~ll~~~ 393 (394)
T 1ivh_A 346 GIQCFGGNGYINDFPMGRFLRDAKLYEIGAGTSEVRRLVIGRAFNADF 393 (394)
T ss_dssp HHHHHGGGGGBTTSTHHHHHHHHHHTTTTTSCHHHHHHHHHHHHHTC-
T ss_pred HHHhcCCccccCCchHHHHHHhcccccccCChHHHHHHHHHHHHHhhc
Confidence 999999999999999999999999999999999999999999998765
No 10
>2jif_A Short/branched chain specific acyl-COA dehydrogen; mitochondrion, oxidoreductase, transit peptide, fatty acid metabolism, FAD, flavoprotein; HET: FAD COS; 2.0A {Homo sapiens}
Probab=100.00 E-value=7.3e-48 Score=335.85 Aligned_cols=237 Identities=39% Similarity=0.633 Sum_probs=221.0
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
+|..+|+++||++|||++.+|. ++++++|||+.|||...+.|++++++|||+|||+|.|+|++.+||+++|++++++++
T Consensus 121 ~l~~~g~~~qk~~~l~~~~~g~-~~~~a~tEp~~Gsd~~~~~t~A~~~g~g~vlnG~K~~is~a~~Ad~~~v~ar~~~~~ 199 (404)
T 2jif_A 121 LIRKHGTEEQKATYLPQLTTEK-VGSFCLSEAGAGSDSFALKTRADKEGDYYVLNGSKMWISSAEHAGLFLVMANVDPTI 199 (404)
T ss_dssp HHHHHCCHHHHHHHHHHHHHTC-CEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEESCGGG
T ss_pred HHHHhCCHHHHHHHHHHHhCCC-cceEEecCCCCCCChhhceeEEEEeCCEEEEEeEEEeecCCcccCEEEEEEEeCCCC
Confidence 4567999999999999999985 889999999999999999999999999999999999999999999999999986432
Q ss_pred CCCCCCCeEEEEEeCCCCCcccchh-----------------------------------------------hhhhhHHH
Q psy13265 82 KCPASKAFTGFIVERDTPGLTPGRK-----------------------------------------------VAAGAVGL 114 (245)
Q Consensus 82 ~~~~~~~~~~f~V~~~~~Gv~~~~~-----------------------------------------------~~~~~lG~ 114 (245)
++.++++|+||++.|||++.+. +++.++|+
T Consensus 200 ---~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~ 276 (404)
T 2jif_A 200 ---GYKGITSFLVDRDTPGLHIGKPENKLGLRASSTCPLTFENVKVPEANILGQIGHGYKYAIGSLNEGRIGIAAQMLGL 276 (404)
T ss_dssp ---GGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCceEEEEEecCCCCeEeccCcccccCCCCceEEEEEccEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4567999999999999988764 56778999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHH
Q psy13265 115 AQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRRNTLYASVAKALAADVANKCATD 194 (245)
Q Consensus 115 ~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~ 194 (245)
++++++.+++|++.|++||+|+.++|.+|++++++...++++++++++++..++.+.+....++++|.++++.+.++++.
T Consensus 277 a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~e~a~~v~~~ 356 (404)
T 2jif_A 277 AQGCFDYTIPYIKERIQFGKRLFDFQGLQHQVAHVATQLEAARLLTYNAARLLEAGKPFIKEASMAKYYASEIAGQTTSK 356 (404)
T ss_dssp HHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCcccCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCccHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999887666677899999999999999999
Q ss_pred HHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHHHh
Q psy13265 195 AVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIEKA 242 (245)
Q Consensus 195 ~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~~ 242 (245)
+++++||.||.+++|++|+|||+++..+++|++++++..|++.+++++
T Consensus 357 a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~~~~~ 404 (404)
T 2jif_A 357 CIEWMGGVGYTKDYPVEKYFRDAKIGTIYEGASNIQLNTIAKHIDAEY 404 (404)
T ss_dssp HHHHHGGGGGBTTSSHHHHHHHHGGGGTTTSCHHHHHHHHHHHHHHHC
T ss_pred HHHhcCcceecCCCcHHHHHhhccceeecCCHHHHHHHHHHHHHhhcC
Confidence 999999999999999999999999999999999999999999998753
No 11
>3nf4_A Acyl-COA dehydrogenase; seattle structural genomics center for infectious disease, S FAD, FADH, tuberculosis, oxidoredu; HET: FAD; 2.35A {Mycobacterium thermoresistibile}
Probab=100.00 E-value=7.4e-48 Score=334.22 Aligned_cols=233 Identities=46% Similarity=0.755 Sum_probs=213.7
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
+|..+|+++||++|||++.+|+.++++++|||+.|||+..+.+++++++|||+|||+|.|+|++.+||+++|++++++
T Consensus 107 ~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~-- 184 (387)
T 3nf4_A 107 PLLVFGTEEQKKRWLPGMLSGEQIGAYSLSEPQAGSDAAALRCAATPTDGGYVINGSKSWITHGGKADFYTLFARTGE-- 184 (387)
T ss_dssp HHHHHSCHHHHHHHHHHHTTSSCCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECC---
T ss_pred HHHHhCCHHHHHHHHHHHhCCCeeEEEEEcCCCCCCChhhCEEEEEEeCCEEEEEeEEecccCCcccCEEEEEEEeCC--
Confidence 467899999999999999999999999999999999999999999999999999999999999999999999999862
Q ss_pred CCCCCCCeEEEEEeCCCCCcccchh-----------------------------------------------hhhhhHHH
Q psy13265 82 KCPASKAFTGFIVERDTPGLTPGRK-----------------------------------------------VAAGAVGL 114 (245)
Q Consensus 82 ~~~~~~~~~~f~V~~~~~Gv~~~~~-----------------------------------------------~~~~~lG~ 114 (245)
+++++++|+||++.|||++.+. +++.++|+
T Consensus 185 ---~~~g~~~flV~~~~pGv~~~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~ 261 (387)
T 3nf4_A 185 ---GSRGVSCFLVPADQPGLSFGKPEEKMGLHAVPTTSAFYDNARIDADRRIGEEGQGLQIAFSALDSGRLGIAAVATGL 261 (387)
T ss_dssp ----CCCEEEEEEETTCTTEEECCCCCBSSCCSSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHTHHHHHHHHHHHHHHH
T ss_pred ---CCCceEEEEEECCCCCeEecCcccccccCCCCeeEEEEeeEEecHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4468999999999999998654 57889999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHH
Q psy13265 115 AQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRRNTLYASVAKALAADVANKCATD 194 (245)
Q Consensus 115 ~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~ 194 (245)
++++++.+++|++.|++||+|+.++|.+|++++++...++++++++++++..++.+.+.....+++|.++++.+.++++.
T Consensus 262 a~~al~~a~~~a~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~aK~~a~~~a~~~~~~ 341 (387)
T 3nf4_A 262 AQAALDEAVAYANERTAFGRKIIDHQGLGFLLADMAAAVATARATYLDAARRRDQGRPYSQQASIAKLTATDAAMKVTTD 341 (387)
T ss_dssp HHHHHHHHHHHHHC------CTTTC-CHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCeeCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988777778999999999999999999
Q ss_pred HHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHH
Q psy13265 195 AVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAII 239 (245)
Q Consensus 195 ~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l 239 (245)
+++++||.||.+++|++|+|||++...+++|++++++..|++.++
T Consensus 342 a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l~ 386 (387)
T 3nf4_A 342 AVQVFGGVGYTRDYRVERYMREAKIMQIFEGTNQIQRLVIARGLT 386 (387)
T ss_dssp HHHHHGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHTTC
T ss_pred HHHhhCcHhhcCCCcHHHHHhHhhcCeeecChHHHHHHHHHHHHh
Confidence 999999999999999999999999999999999999999999775
No 12
>1rx0_A Acyl-COA dehydrogenase family member 8, mitochondrial; flavoprotein, coenzyme A, oxidoreductase; HET: FAD 2MC; 1.77A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=1.3e-47 Score=333.18 Aligned_cols=235 Identities=36% Similarity=0.593 Sum_probs=219.4
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
+|..+|+++||++|||++++|+.++++++|||+.|||...+.|++++++|||+|||+|.|+|++.+||+++|+++++++
T Consensus 110 ~l~~~g~~~qk~~~l~~~~~G~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~- 188 (393)
T 1rx0_A 110 MIDSFGNEEQRHKFCPPLCTMEKFASYCLTEPGSGSDAASLLTSAKKQGDHYILNGSKAFISGAGESDIYVVMCRTGGP- 188 (393)
T ss_dssp HHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSSGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEESSSS-
T ss_pred HHHHHCCHHHHHHHHHHHhCCCceEEEEecCCCCCcCcccceeEEEEcCCEEEEEeEEEeecCCccCCEEEEEEEcCCC-
Confidence 3567999999999999999999999999999999999999999999999999999999999999999999999998642
Q ss_pred CCCCCCCeEEEEEeCCCCCcccchh-----------------------------------------------hhhhhHHH
Q psy13265 82 KCPASKAFTGFIVERDTPGLTPGRK-----------------------------------------------VAAGAVGL 114 (245)
Q Consensus 82 ~~~~~~~~~~f~V~~~~~Gv~~~~~-----------------------------------------------~~~~~lG~ 114 (245)
+++++++|+||++.|||++.+. +++.++|+
T Consensus 189 ---~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~ 265 (393)
T 1rx0_A 189 ---GPKGISCIVVEKGTPGLSFGKKEKKVGWNSQPTRAVIFEDCAVPVANRIGSEGQGFLIAVRGLNGGRINIASCSLGA 265 (393)
T ss_dssp ---SGGGEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCceEEEEEeCCCCCeEecCcccccccCCCCceEEEEcCeEeCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 4468999999999999988653 56778999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-chhHHHHHHHHHHHHHHHHHH
Q psy13265 115 AQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRR-NTLYASVAKALAADVANKCAT 193 (245)
Q Consensus 115 ~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~-~~~~~~~~K~~~~~~~~~~~~ 193 (245)
++++++.+++|++.|++||+|+.++|.+|++++++..+++++++++++++..++.+.. ....++++|.++++.+.++++
T Consensus 266 a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~aK~~a~~~a~~v~~ 345 (393)
T 1rx0_A 266 AHASVILTRDHLNVRKQFGEPLASNQYLQFTLADMATRLVAARLMVRNAAVALQEERKDAVALCSMAKLFATDECFAICN 345 (393)
T ss_dssp HHHHHHHHHHHHHHCEETTEEGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTTHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchhHHHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999987643 355789999999999999999
Q ss_pred HHHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHH
Q psy13265 194 DAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIE 240 (245)
Q Consensus 194 ~~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~ 240 (245)
.+++++||.||.+++|++|+|||+++..+++|++++++..|++.+|+
T Consensus 346 ~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 392 (393)
T 1rx0_A 346 QALQMHGGYGYLKDYAVQQYVRDSRVHQILEGSNEVMRILISRSLLQ 392 (393)
T ss_dssp HHHHHTGGGGGBTTSTHHHHHHHHHHTTTSSSCHHHHHHHHHHHHHH
T ss_pred HHHHhcCCeeecCCChHHHHHHhccCceecCChHHHHHHHHHHHHhc
Confidence 99999999999999999999999999999999999999999999885
No 13
>3sf6_A Glutaryl-COA dehydrogenase; ssgcid, NIH, niaid, SBRI, UW, emerald biostructures, structu genomics; HET: FDA; 1.70A {Mycobacterium smegmatis}
Probab=100.00 E-value=9.5e-48 Score=335.14 Aligned_cols=233 Identities=33% Similarity=0.562 Sum_probs=221.9
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
+|..+|+++||++|||++.+|+.++++++|||++|||+.++.|++++++|||+|||+|.|+|++.+||+++|+++++
T Consensus 122 ~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~ar~~--- 198 (403)
T 3sf6_A 122 AIHAFGSDEQKDQWLPDMASGHRIGCFGLTEPDHGSDPAGMRTRATRSGDDWILTGTKMWITNGSVADVAVVWARTD--- 198 (403)
T ss_dssp HHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETGGGCSEEEEEEEET---
T ss_pred HHHHhCCHHHHHHHHHHHhCCCceEEEEEccCCCCCCchhcEEEEEEECCEEEEEEEEEeecCCcccCEEEEEEEeC---
Confidence 46779999999999999999999999999999999999999999999999999999999999999999999999985
Q ss_pred CCCCCCCeEEEEEeCCCCCcccchh----------------------------------------------hhhhhHHHH
Q psy13265 82 KCPASKAFTGFIVERDTPGLTPGRK----------------------------------------------VAAGAVGLA 115 (245)
Q Consensus 82 ~~~~~~~~~~f~V~~~~~Gv~~~~~----------------------------------------------~~~~~lG~~ 115 (245)
+++++|+||++.|||++.+. +++.++|++
T Consensus 199 -----~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~~~g~~~~~~~l~~~r~~~aa~~~G~a 273 (403)
T 3sf6_A 199 -----EGIRGFVVPTDTPGFTANTIKSKMSLRASVTSELVLDGVRLPDSARLPGATSLGAPLRCLNEARFGIVFGALGAA 273 (403)
T ss_dssp -----TEEEEEEEETTSTTEEEEECCSCSSCTTSCEEEEEEEEEEEEGGGBCTTCCSTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----CceEEEEEECCCCCeEecCCCCccCCCCCceeEEEEccEEEcHHHccCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 25899999999999988765 567789999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHH
Q psy13265 116 QRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRRNTLYASVAKALAADVANKCATDA 195 (245)
Q Consensus 116 ~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~~ 195 (245)
+++++.+++|++.|++||+|+.++|.+|++++++...++++++++++++..++.+.+....++++|.++++.+.++++.+
T Consensus 274 ~~al~~a~~ya~~R~~fg~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~v~~~a 353 (403)
T 3sf6_A 274 RDCLETALAYACSREQFDRPIGGFQLTQQKLADMTLEYGKGFLLALHLGRQKDAGELAPEQVSLGKLNNVREAIEIARTA 353 (403)
T ss_dssp HHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCcccCCcchhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999887777889999999999999999999
Q ss_pred HHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHHHh
Q psy13265 196 VQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIEKA 242 (245)
Q Consensus 196 ~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~~ 242 (245)
++++||.||.+++|++|+|||++...+++|++++++..|++.+|+..
T Consensus 354 ~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~llgl~ 400 (403)
T 3sf6_A 354 RTVLGASGITGEYPVMRHANNLESVLTYEGTSEMHTLIIGQALTGVG 400 (403)
T ss_dssp HHHHGGGGGSTTSSHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHSCC
T ss_pred HHhcCCeEccccCcHHHHHhhcccceeecCHHHHHHHHHHHHHhCcc
Confidence 99999999999999999999999999999999999999999998753
No 14
>2dvl_A Acyl-COA dehydrogenase; structural genomics, NPPSFA, national project on protein STR and functional analyses; HET: FAD; 2.50A {Thermus thermophilus}
Probab=100.00 E-value=1.6e-47 Score=330.55 Aligned_cols=231 Identities=45% Similarity=0.717 Sum_probs=219.3
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
+|..+|+++||++|||++.+|+.++++++|||+.|||...+.+++++++|||+|||+|.|+|++.+||+++|++++++
T Consensus 95 ~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~-- 172 (372)
T 2dvl_A 95 MLLRFGSEAQKRRYLVPLARGEWIGAFCLTEPQAGSDAKSLRAEARRVKGGFVLNGVKSWITSAGHAHLYVVMARTEK-- 172 (372)
T ss_dssp HHHHHCCHHHHHHTHHHHHTTSSCEEEECCCSSCSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEETT--
T ss_pred HHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCChhhCeeEEEEECCEEEEEeEEEeecCCCcCCEEEEEEEeCC--
Confidence 467799999999999999999999999999999999999999999999999999999999999999999999999852
Q ss_pred CCCCCCCeEEEEEeCCCCCcccchh-----------------------------------------------hhhhhHHH
Q psy13265 82 KCPASKAFTGFIVERDTPGLTPGRK-----------------------------------------------VAAGAVGL 114 (245)
Q Consensus 82 ~~~~~~~~~~f~V~~~~~Gv~~~~~-----------------------------------------------~~~~~lG~ 114 (245)
++++|+||++.|||++.+. +++.++|+
T Consensus 173 ------g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~ 246 (372)
T 2dvl_A 173 ------GISAFLVEKGTPGLSFGRPEEKMGLHAAHTAEVRLEEVFVPEENLLGEEGRGLAYALAGLDSGRVGVAAQAVGI 246 (372)
T ss_dssp ------EEEEEEEETTCTTEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ------CcEEEEEeCCCCCeEecCcccccccCcCCeeEEEECcEEeCHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 5899999999999988764 56778999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHH
Q psy13265 115 AQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRRNTLYASVAKALAADVANKCATD 194 (245)
Q Consensus 115 ~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~ 194 (245)
++++++.+++|++.|++||+|+.++|.+|++++++..+++++++++++++..++.+.+....++++|.++++.+.++++.
T Consensus 247 a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~g~~~~~~~~~aK~~a~~~a~~~~~~ 326 (372)
T 2dvl_A 247 ARGAFEIAKAYAEEREQFGKKLKEHQAIAFKIADMHVKIAAARALVLEAARKKDRGERFTLEASAAKLFASAAAVEVTRE 326 (372)
T ss_dssp HHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCcccCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999887666778999999999999999999
Q ss_pred HHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHH
Q psy13265 195 AVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIE 240 (245)
Q Consensus 195 ~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~ 240 (245)
+++++||.||.+++|++|+|||+++..+++|++++++..|++.+|+
T Consensus 327 a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~~l~ 372 (372)
T 2dvl_A 327 AVQVLGGYGYHRDYRVERYYRDAKVTEIYEGTSEIQRLVIARELYR 372 (372)
T ss_dssp HHHHTGGGGGSGGGSHHHHHHHHHGGGTTTSCHHHHHHHHHHHHHC
T ss_pred HHHhhcCeecCCCCcHHHHHHHhhcceecCCHHHHHHHHHHHHhhC
Confidence 9999999999999999999999999999999999999999998874
No 15
>2pg0_A Acyl-COA dehydrogenase; GK1316, geobacillus kaustophilus HTA structural genomics, PSI, protein structure initiative; HET: FAD; 1.80A {Geobacillus kaustophilus}
Probab=100.00 E-value=1.6e-47 Score=331.99 Aligned_cols=236 Identities=36% Similarity=0.567 Sum_probs=219.8
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
+|..+|+++||++|||++.+|+.++++++|||+.|||+..+.|++++++|||+|||+|.|+|++.+||+++|+++++++.
T Consensus 101 ~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~ 180 (385)
T 2pg0_A 101 YIASYGTEEQKQKWLPKCVTGELITAIAMTEPGAGSDLANISTTAVKDGDYYIVNGQKTFITNGIHADLIVVACKTDPQA 180 (385)
T ss_dssp HHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTCSEEEEEEESCTTC
T ss_pred HHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCCCcCHhhCeEEEEEcCCEEEEEeEEecccCCcccCEEEEEEEeCCcc
Confidence 46779999999999999999999999999999999999999999999999999999999999999999999999986431
Q ss_pred CCCCCCCeEEEEEeCCCCCcccchh-----------------------------------------------hhhhhHHH
Q psy13265 82 KCPASKAFTGFIVERDTPGLTPGRK-----------------------------------------------VAAGAVGL 114 (245)
Q Consensus 82 ~~~~~~~~~~f~V~~~~~Gv~~~~~-----------------------------------------------~~~~~lG~ 114 (245)
.+++.++++|+||++.|||++.+. +++.++|+
T Consensus 181 -~~~~~g~~~flV~~~~pGv~v~~~~~~~g~~~~~~~~v~fd~v~Vp~~~~lg~~g~g~~~~~~~l~~~r~~~aa~~~G~ 259 (385)
T 2pg0_A 181 -KPPHRGISLLVVERDTPGFTRGRKLEKVGLHAQDTAELFFQDAKVPAYNLLGEEGKGFYYLMEKLQQERLVVAIAAQTA 259 (385)
T ss_dssp -SSGGGGEEEEEEETTCTTEEECCCCCBSSCTTSCCEEEEEEEEEEEGGGEESCTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -CCCCCceEEEEEeCCCCCeEecCCccccccCCCceEEEEEcceEEcHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 013457899999999999998653 57788999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHH
Q psy13265 115 AQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRRNTLYASVAKALAADVANKCATD 194 (245)
Q Consensus 115 ~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~ 194 (245)
++++++.+++|++.|++||+|+.++|.+|++++++.+.++++++++++++..++.+.+....++++|.++++.+.++++.
T Consensus 260 a~~al~~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK~~a~e~a~~~~~~ 339 (385)
T 2pg0_A 260 AEVMFSLTKQYVKQRTAFGKRVSEFQTVQFRLAEMATEIALGRTFVDRVIEEHMAGKQIVTEVSMAKWWITEMAKRVAAE 339 (385)
T ss_dssp HHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhcCccCCCccchhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999887666778999999999999999999
Q ss_pred HHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHH
Q psy13265 195 AVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAI 238 (245)
Q Consensus 195 ~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~ 238 (245)
+++++||.||.+++|++|+|||++...+++|++++++..|++.+
T Consensus 340 a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~l 383 (385)
T 2pg0_A 340 AMQLHGGYGYMEEYEIARRYRDIPVSAIYAGTNEMMKTIIARQL 383 (385)
T ss_dssp HHHHTGGGGGBTTSHHHHHHHHGGGGGTTTSCHHHHHHHHHHHT
T ss_pred HHHHhCccccCCCCcHHHHHhhhcCceeecCHHHHHHHHHHHHh
Confidence 99999999999999999999999999999999999999999864
No 16
>3p4t_A Putative acyl-COA dehydrogenase; ssgcid, structural genomics, seattle structural genomics CEN infectious disease, oxidoreductase; HET: FAO; 1.70A {Mycobacterium smegmatis} PDB: 3oib_A*
Probab=100.00 E-value=1.8e-47 Score=333.39 Aligned_cols=233 Identities=32% Similarity=0.494 Sum_probs=221.0
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
+|..+|+++||++||+++++|+.++++++|||+.|||+.++.|++++++|||+|||+|.|+|++.+||+++|+++++++
T Consensus 119 ~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~~~- 197 (403)
T 3p4t_A 119 HMIASGDQRLIDTYVRPTLRGEKIGALAITEPGGGSDVGHLRTRADLDGDHYVINGAKTYITSGVRADYVVTAARTGGP- 197 (403)
T ss_dssp HHHHHTCHHHHHHTHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEECSSS-
T ss_pred HHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceEEEEEeCCEEEEEEEEEEecCCcccCEEEEEEEeCCC-
Confidence 4677999999999999999999999999999999999999999999999999999999999999999999999998753
Q ss_pred CCCCCCCeEEEEEeCCCCCcccchh-----------------------------------------------hhhhhHHH
Q psy13265 82 KCPASKAFTGFIVERDTPGLTPGRK-----------------------------------------------VAAGAVGL 114 (245)
Q Consensus 82 ~~~~~~~~~~f~V~~~~~Gv~~~~~-----------------------------------------------~~~~~lG~ 114 (245)
++.++++|+||++.|||++.+. +++.++|+
T Consensus 198 ---~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~l~~~r~~~aa~~~G~ 274 (403)
T 3p4t_A 198 ---GAGGVSLIVVDKGTPGFEVTRKLDKMGWRSSDTAELSYTDVRVPVANLVGSENTGFAQIAAAFVAERVGLATQAYAG 274 (403)
T ss_dssp ---SGGGEEEEEEETTCTTEEEEEECCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCceEEEEEeCCCCCeEecCCCCcccCCCCCeeEEEEcceEecHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 3568999999999999998653 56789999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-hhHHHHHHHHHHHHHHHHHH
Q psy13265 115 AQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRRN-TLYASVAKALAADVANKCAT 193 (245)
Q Consensus 115 ~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~~-~~~~~~~K~~~~~~~~~~~~ 193 (245)
++++++.+++|++.|++||+|+.++|.+|++++++...++++++++++++..++.+.+. ....+++|.++++.+.++++
T Consensus 275 a~~al~~a~~~a~~R~~fg~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~aK~~a~~~a~~v~~ 354 (403)
T 3p4t_A 275 AQRCLDLTVEWCRNRDTFGRPLISRQAVQNTLAGMARRIDVARVYTRHVVERQLAGETNLIAEVCFAKNTAVEAGEWVAN 354 (403)
T ss_dssp HHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhCccCCCcccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCchhHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999987766 67899999999999999999
Q ss_pred HHHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHH
Q psy13265 194 DAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAI 238 (245)
Q Consensus 194 ~~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~ 238 (245)
.+++++||.||.+++|++|+|||+++..+++|++++++..|++.+
T Consensus 355 ~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~l 399 (403)
T 3p4t_A 355 QAVQLFGGMGYMAESEVERQYRDMRILGIGGGTTEILTSLAAKTL 399 (403)
T ss_dssp HHHHHHGGGGGBTTSHHHHHHHHHTTTTTTTSCHHHHHHHHHHHH
T ss_pred HHHHhhChhhccCCCcHHHHHHHhhcceeccCHHHHHHHHHHHHc
Confidence 999999999999999999999999999999999999999999987
No 17
>3ii9_A Glutaryl-COA dehydrogenase; slipchip, microfluidics, screening, optimization, protein crystallization, structural genomics; HET: PGE PG4; 1.74A {Burkholderia pseudomallei 1710B} PDB: 3eon_A* 3eom_A* 3gqt_A* 3gnc_A* 3d6b_A
Probab=100.00 E-value=3.3e-48 Score=337.32 Aligned_cols=237 Identities=33% Similarity=0.515 Sum_probs=218.0
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
+|..+|+++||++|||++++|+.++++++|||++|||+..+.|++++++|||+|||+|.|+|++.+||+++|+++++++
T Consensus 111 ~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~~~- 189 (396)
T 3ii9_A 111 PIFEFGSDAQKEKYLPKLATGEWIGCFGLTEPNHGSDPGSMVTRARKVPGGYSLSGSKMWITNSPIADVFVVWAKLDED- 189 (396)
T ss_dssp HHHHHSCHHHHHHHHHHHHHTSSCEEEECCCCC------CCCCEEEEETTEEEEEEEEEEEETGGGCSEEEEEEEEEET-
T ss_pred HHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCChhhCeeEEEEeCCEEEEEEEEEeECCCccCCEEEEEEEecCC-
Confidence 4778999999999999999999999999999999999999999999999999999999999999999999999998632
Q ss_pred CCCCCCCeEEEEEeCCCCCcccchh----------------------------------------------hhhhhHHHH
Q psy13265 82 KCPASKAFTGFIVERDTPGLTPGRK----------------------------------------------VAAGAVGLA 115 (245)
Q Consensus 82 ~~~~~~~~~~f~V~~~~~Gv~~~~~----------------------------------------------~~~~~lG~~ 115 (245)
+.+++++|+||++.|||++.+. +++.++|++
T Consensus 190 ---g~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~Vp~~~~l~~~~g~~~~~~~l~~~r~~~aa~~~G~a 266 (396)
T 3ii9_A 190 ---GRDEIRGFILEKGCKGLSAPAIHGKVGLRASITGEIVLDEAFVPEENILPHVKGLRGPFTCLNSARYGIAWGALGAA 266 (396)
T ss_dssp ---TEEEEEEEEEETTCTTEECCBCCCCSSCTTSCEEEEEEEEEEEEGGGBCTTCCSTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCceEEEEEecCCCCeEeccccccccCCcCCeeEEEEccEEECHHHccCCChHHHHHHHHHHHHHHHHHHHHHHHH
Confidence 3457999999999999988765 567789999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHH
Q psy13265 116 QRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRRNTLYASVAKALAADVANKCATDA 195 (245)
Q Consensus 116 ~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~~ 195 (245)
+++++.+++|++.|++||+|+.++|.+|++|+++...++++++++++++..++.+.+.....+++|.++++.+.++++.+
T Consensus 267 ~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~~~~~a 346 (396)
T 3ii9_A 267 ESCWHIARQYVLDRKQFGRPLAANQLIQKKLADMQTEITLGLQGVLRLGRMKDEGTAAVEITSIMKRNSCGKALDIARLA 346 (396)
T ss_dssp HHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhhCeeCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999887777789999999999999999999
Q ss_pred HHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHHHh
Q psy13265 196 VQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIEKA 242 (245)
Q Consensus 196 ~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~~ 242 (245)
++++||.||.+++|++|+|||+++..+++|++++++..|++.+|+..
T Consensus 347 ~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~~~~~~ia~~llglp 393 (396)
T 3ii9_A 347 RDMLGGNGISDEFGVARHLVNLEVVNTYEGTHDIHALILGRAQTGIQ 393 (396)
T ss_dssp HHHHCSCSCSGGGHHHHHHHHHHHHHHHHCSSCHHHHHHHHHHHSCC
T ss_pred HHhhCcccccCCCcHHHHHhhhcCceeecCHHHHHHHHHHHHHhCcc
Confidence 99999999999999999999999999999999999999999998753
No 18
>2ix5_A Acyl-coenzyme A oxidase 4, peroxisomal; FAD, ACX4, flavin, peroxisome, glyoxysome, fatty acid metabo lipid metabolism, acyl-COA oxidase; HET: CAA FAD; 2.7A {Arabidopsis thaliana} PDB: 2ix6_A*
Probab=100.00 E-value=1.8e-47 Score=336.08 Aligned_cols=234 Identities=34% Similarity=0.516 Sum_probs=220.3
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
+|..+|+++||++|||++.+|+.++++++|||+.|||...+.|++++++|||+|||+|.|+|++.+|||++|+++++++
T Consensus 146 ~l~~~gt~~qk~~~l~~l~~G~~~~a~a~tEp~~GSd~~~~~t~A~~~gdg~vLnG~K~~is~a~~Ad~~lv~Ar~~~~- 224 (436)
T 2ix5_A 146 TIALCGSEAQKEKYLPSLAQLNTVACWALTEPDNGSDASGLGTTATKVEGGWKINGQKRWIGNSTFADLLIIFARNTTT- 224 (436)
T ss_dssp HHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEEETTT-
T ss_pred HHHHhCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCcccceEEEEEeCCEEEEeeeccCCCCCcccCEEEEEEEECCC-
Confidence 4667999999999999999999999999999999999999999999999999999999999999999999999998632
Q ss_pred CCCCCCCeEEEEEeCCCCCcccchh----------------------------------------------hhhhhHHHH
Q psy13265 82 KCPASKAFTGFIVERDTPGLTPGRK----------------------------------------------VAAGAVGLA 115 (245)
Q Consensus 82 ~~~~~~~~~~f~V~~~~~Gv~~~~~----------------------------------------------~~~~~lG~~ 115 (245)
.++++|+||++.|||++.+. +++.++|++
T Consensus 225 -----~~~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~g~~~~~~~l~~~r~~~aa~~~G~a 299 (436)
T 2ix5_A 225 -----NQINGFIVKKDAPGLKATKIPNKIGLRMVQNGDILLQNVFVPDEDRLPGVNSFQDTSKVLAVSRVMVAWQPIGIS 299 (436)
T ss_dssp -----SSEEEEEEETTCTTEEEEECCCBSSSTTSCEEEEEEEEEEEEGGGBCTTCSSHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----CcEEEEEEECCCCCeEeeccccccCCCcCCceeEEeccEEECHHHcCCccccHHHHHHHHHHHHHHHHHHHHHHH
Confidence 36899999999999988764 567789999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHH
Q psy13265 116 QRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRRNTLYASVAKALAADVANKCATDA 195 (245)
Q Consensus 116 ~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~~ 195 (245)
+++++.+++|++.|++||+|+.++|.+|++|+++...++++++++++++..++.+.+.....+++|.++++.+.++++.+
T Consensus 300 ~~al~~a~~ya~~R~qfG~pi~~~q~vq~~la~~~~~~~aar~l~~~aa~~~d~g~~~~~~as~aK~~a~e~a~~v~~~a 379 (436)
T 2ix5_A 300 MGIYDMCHRYLKERKQFGAPLAAFQLNQQKLVQMLGNVQAMFLMGWRLCKLYETGQMTPGQASLGKAWISSKARETASLG 379 (436)
T ss_dssp HHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCeeCCcchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999998876666678999999999999999999
Q ss_pred HHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHHH
Q psy13265 196 VQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIEK 241 (245)
Q Consensus 196 ~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~ 241 (245)
++++||.||.+++|++|+|||+++..+++|++++++..|++.+++.
T Consensus 380 ~q~~Gg~G~~~e~~l~r~~Rda~~~~i~~Gt~ei~~~~iar~llgl 425 (436)
T 2ix5_A 380 RELLGGNGILADFLVAKAFCDLEPIYTYEGTYDINTLVTGREVTGI 425 (436)
T ss_dssp HHHTGGGGGBGGGSHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHSC
T ss_pred HHHhCccccccCChHHHHHHHhhcceeecCHHHHHHHHHHHHHhCC
Confidence 9999999999999999999999999999999999999999999864
No 19
>3swo_A Glutaryl-COA dehydrogenase; ssgcid, glutaryl-COA dehdrogenase, mycobacerium smegmatis, S genomics; HET: FDA; 1.45A {Mycobacterium smegmatis}
Probab=100.00 E-value=2.1e-47 Score=332.62 Aligned_cols=233 Identities=30% Similarity=0.496 Sum_probs=221.6
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
+|..+|+++||++|||++.+|+.++++++|||+.|||+.++.|++++++|||+|||+|.|+|++.+||+++|+++++
T Consensus 117 ~l~~~g~~~q~~~~l~~~~~G~~~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~vs~a~~Ad~~~v~a~~~--- 193 (399)
T 3swo_A 117 SIYRYGSEEQKNEWLPRLAAGDAIGCFGLTEPDFGSNPAGMRTRARRDGSDWILNGTKMWITNGNLADVATVWAQTD--- 193 (399)
T ss_dssp HHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEEETTTTCSEEEEEEBCT---
T ss_pred HHHhcCCHHHHHHHHHHHhCCCeeeEEEecCCCCCCCCccceEEEEEeCCEEEEEEEEEeECCCCccCEEEEEEEeC---
Confidence 46779999999999999999999999999999999999999999999999999999999999999999999999975
Q ss_pred CCCCCCCeEEEEEeCCCCCcccchh----------------------------------------------hhhhhHHHH
Q psy13265 82 KCPASKAFTGFIVERDTPGLTPGRK----------------------------------------------VAAGAVGLA 115 (245)
Q Consensus 82 ~~~~~~~~~~f~V~~~~~Gv~~~~~----------------------------------------------~~~~~lG~~ 115 (245)
+++++|+||++.|||++.+. +++.++|++
T Consensus 194 -----~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~fd~v~Vp~~~~lg~~~g~~~~~~~l~~~r~~~aa~~~G~a 268 (399)
T 3swo_A 194 -----DGIRGFLVPTDTPGFTANEIHRKLSLRASVTSELVLDNVRLPASAQLPLAEGLSAPLSCLNEARFGIVFGALGAA 268 (399)
T ss_dssp -----TSCEEEEEETTSTTEEEEECCCBSSCCSSCEEEEEEEEEEECGGGBCTTCCSTHHHHHHHHHHHHHHHHHHHHHH
T ss_pred -----CceEEEEEeCCCCCeEeecCcCcccCCCCceeEEEEccEEEcHHHcCCCChhHHHHHHHHHHHHHHHHHHHHHHH
Confidence 25899999999999988765 567789999
Q ss_pred HHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHH
Q psy13265 116 QRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRRNTLYASVAKALAADVANKCATDA 195 (245)
Q Consensus 116 ~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~~ 195 (245)
+++++.+++|++.|++||+|+.++|.+|++++++...++++++++++++..++.+.+....++++|.++++.+.++++.+
T Consensus 269 ~~al~~a~~~a~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~aK~~a~~~a~~v~~~a 348 (399)
T 3swo_A 269 RDSLETTIAYTQSREVFDKPLSNYQLTQEKLANMTVELGKGMLLAIHLGRIKDAEGVRPEQISLGKLNNVREAIAIAREC 348 (399)
T ss_dssp HHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhcCeeCCcchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999887777789999999999999999999
Q ss_pred HHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHHHh
Q psy13265 196 VQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIEKA 242 (245)
Q Consensus 196 ~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~~ 242 (245)
++++||.||.+++|++|+|||+++..+++|++++++..|++.+|+..
T Consensus 349 ~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~~i~~~~ia~~llg~p 395 (399)
T 3swo_A 349 RTLLGGSGITLEYSPLRHANNLESVLTYEGTSEMHLLSIGKALTGKA 395 (399)
T ss_dssp HHHHGGGGGBSSSTHHHHHHHHHHHHHSSSCHHHHHHHHHHHHHSCC
T ss_pred HHhhCcccccCCCcHHHHHHHhhcceeecCHHHHHHHHHHHHHcCcc
Confidence 99999999999999999999999999999999999999999999753
No 20
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=100.00 E-value=3.9e-47 Score=344.55 Aligned_cols=236 Identities=36% Similarity=0.624 Sum_probs=219.1
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEe--CCeEEEeeeeecccCCCcccEEEEEEEeCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKK--GDEWILNGQKMWITNGGVANWYFVLARTNP 79 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~--~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~ 79 (245)
+|+.+|+++||++|||++++|++++++++|||++|||+.++.|+|+++ +++|+|||+|.|+|++.+||+++|+|++++
T Consensus 125 ~l~~~Gt~eQk~~~Lp~la~Ge~~~a~alTEp~aGSD~~~~~T~A~~~~dG~~yvLnG~K~~is~a~~Ad~~lV~Art~~ 204 (597)
T 3owa_A 125 PIVLFGNEEQKKKYLPLLATGEKLAAYALTEPGSGSDALGAKTTARLNAEGTHYVLNGEKQWITNSAFADVFIVYAKIDG 204 (597)
T ss_dssp HHHHHCCHHHHHHHHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEETT
T ss_pred HHHHcCCHHHHHHHHHHHhCCCcceeeEecCCCCCCCcccceeEEEEeCCCCEEEEeeEEEEeCCCccCCEEEEEEEeCC
Confidence 477899999999999999999999999999999999999999999985 446999999999999999999999999863
Q ss_pred CCCCCCCCCeEEEEEeCCCCCcccchh-----------------------------------------------hhhhhH
Q psy13265 80 DPKCPASKAFTGFIVERDTPGLTPGRK-----------------------------------------------VAAGAV 112 (245)
Q Consensus 80 ~~~~~~~~~~~~f~V~~~~~Gv~~~~~-----------------------------------------------~~~~~l 112 (245)
.++++|+||++.|||++.+. +++.++
T Consensus 205 -------~g~s~flV~~~~pGv~v~~~~~~~Glrgs~t~~v~fddV~VP~~~lLG~~g~G~~~~~~~l~~~R~~~aa~~l 277 (597)
T 3owa_A 205 -------EHFSAFIVEKDYAGVSTSPEEKKMGIKCSSTRTLILEDALVPKENLLGEIGKGHIIAFNILNIGRYKLGVGTV 277 (597)
T ss_dssp -------TEEEEEEEETTSTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHH
T ss_pred -------CceEEEEEeCCCCCeEEecccccccCCCCCceEEEEeceeecHHHhcCcccchHHHHHHhhHhHHHHHHHHHH
Confidence 26899999999999988765 578899
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCC-------------------Cc
Q psy13265 113 GLAQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGR-------------------RN 173 (245)
Q Consensus 113 G~~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~-------------------~~ 173 (245)
|+++++++.+++|++.|++||+|+.++|.+|+++++|.+.++++++++++++..++... +.
T Consensus 278 G~a~~al~~a~~ya~~R~qfG~pi~~~q~vq~~LA~m~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~~ 357 (597)
T 3owa_A 278 GSAKRAVEISAQYANQRQQFKQPIARFPLIQEKLANMAAKTYAAESSVYRTVGLFESRMSTLSEEEVKDGKAVAASIAEY 357 (597)
T ss_dssp HHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCHHHHHHCHHHHHHHHTT
T ss_pred HHHHHHHHHHHHHHHhCeeCCccccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCccccccccchhhhhhhhhHHH
Confidence 99999999999999999999999999999999999999999999999999999887532 12
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHHHhhc
Q psy13265 174 TLYASVAKALAADVANKCATDAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIEKAKN 244 (245)
Q Consensus 174 ~~~~~~~K~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~~~~ 244 (245)
...++++|.++++.+.++++.+++++||.||.+++|++|+|||++...+++|++++++..|++.+|+++.+
T Consensus 358 ~~~~s~aK~~ase~a~~v~~~a~qi~GG~G~~~e~~ler~~RDar~~~i~eGt~ei~r~~Ia~~ll~~~~k 428 (597)
T 3owa_A 358 AIECSLNKVFGSEVLDYTVDEGVQIHGGYGFMAEYEIERMYRDSRINRIFEGTNEINRLIVPGTFLRKAMK 428 (597)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTSHHHHHHHHHGGGGTSSSCHHHHHHHHHHHHHHHHHT
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCccccccChHHHHHHHhhhhheeCcHHHHHHHHHHHHHHHHHhc
Confidence 34688999999999999999999999999999999999999999999999999999999999999998764
No 21
>2eba_A Putative glutaryl-COA dehydrogenase; thermus thermophilius, FAD, STRU genomics, NPPSFA; HET: FAD; 2.21A {Thermus thermophilus}
Probab=100.00 E-value=1.2e-46 Score=326.34 Aligned_cols=233 Identities=33% Similarity=0.531 Sum_probs=216.8
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCC-CCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDV-NGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPD 80 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~-~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~ 80 (245)
+|..+|+++||++|||++.+|+.++++++|||+.|||+ ..+.|++++++|||+|||+|.|+|++.+||+++|+++++ +
T Consensus 103 ~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~Gsd~~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~-~ 181 (385)
T 2eba_A 103 PIYAYGSEEQKREFLPKLARGEMVGCFGLTEPDGGSDPYGNMKTRARREGDTWVLNGTKMWITNGNLAHLAVIWAKDE-G 181 (385)
T ss_dssp HHHHHSCHHHHHHHHHHHHTTSSCEEEECCCTTCTTSTTTTCCCEEEC--CEEEEEEEEEEEETTTTCSEEEEEEECC--
T ss_pred HHHHhCCHHHHHHHHHHHhCCCeEEEEEeCCCCcCCCccccCeeEEEEeCCEEEEEeeeeccCCCcccCEEEEEEEeC-C
Confidence 46779999999999999999999999999999999999 899999999999999999999999999999999999975 2
Q ss_pred CCCCCCCCeEEEEEeCCCCCcccchh----------------------------------------------hhhhhHHH
Q psy13265 81 PKCPASKAFTGFIVERDTPGLTPGRK----------------------------------------------VAAGAVGL 114 (245)
Q Consensus 81 ~~~~~~~~~~~f~V~~~~~Gv~~~~~----------------------------------------------~~~~~lG~ 114 (245)
+ + +++|+||++.|||++.+. +++.++|+
T Consensus 182 ----g-~-~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~f~~v~Vp~~~~l~~~~g~~~~~~~l~~~r~~~aa~~~G~ 255 (385)
T 2eba_A 182 ----G-E-VLGFLVPTDTPGFQAREVKRKMSLRASVTSELVLEEVRVPESLRLPKALGLKAPLSCLTQARFGIAWGAMGA 255 (385)
T ss_dssp --------EEEEEEETTSTTEEEEECCSBSSSCSSCEEEEEEEEEEEEGGGBCTTCCSTHHHHHHHHHHHHHHHHHHHHH
T ss_pred ----C-c-EEEEEEeCCCCCeEecccccccccccCceeEEEEccEEEcHHHccCCCchHHHHHHHHHHHHHHHHHHHHHH
Confidence 2 2 889999999999988764 56778999
Q ss_pred HHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHH
Q psy13265 115 AQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRRNTLYASVAKALAADVANKCATD 194 (245)
Q Consensus 115 ~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~ 194 (245)
++++++.+++|++.|++||+|+.++|.+|++++++...++++++++++++..++.+.+.....+++|.++++.+.++++.
T Consensus 256 a~~al~~a~~ya~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~g~~~~~~~~~aK~~a~~~a~~v~~~ 335 (385)
T 2eba_A 256 LEAVYEEAVAFAKSRSTFGEPLAKKQLVQAKLAEMLAWHTEGLLLAWRLARLKDEGKLTPAQVSLAKRQNVWKALQAARM 335 (385)
T ss_dssp HHHHHHHHHHHHHHCBSSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhhCeeCCeeHHhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999887666678899999999999999999
Q ss_pred HHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHHH
Q psy13265 195 AVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIEK 241 (245)
Q Consensus 195 ~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~ 241 (245)
+++++||.||.+++|++|+|||+++..+++|++++++..|++.+|+.
T Consensus 336 a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~~~~~~~~ia~~llgl 382 (385)
T 2eba_A 336 ARDILGGSGITLEYHAIRHMLNLETVYTYEGTHDVHTLVLGREITGL 382 (385)
T ss_dssp HHHHHGGGGGBTTSSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHSC
T ss_pred HHHHhCCcccCCcChHHHHHHhccCceeeCChHHHHHHHHHHHHhCc
Confidence 99999999999999999999999999999999999999999999864
No 22
>2wbi_A Acyl-COA dehydrogenase family member 11; human, phosphoprotein, oxidoreducta; HET: FAD; 2.80A {Homo sapiens}
Probab=100.00 E-value=9.4e-47 Score=331.19 Aligned_cols=242 Identities=28% Similarity=0.455 Sum_probs=220.7
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCC-CCCCCCCceeEEEEeCCeEEEeeeeecccCCCc--ccEEEEEEEeC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPG-AGSDVNGVKTKAVKKGDEWILNGQKMWITNGGV--ANWYFVLARTN 78 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~-~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~--ad~~lv~a~~~ 78 (245)
+|..+|+++||++|||++++|++++++++|||+ +|||..++.|++++++|||+|||+|+|+|++.+ ||+++|+++++
T Consensus 126 ~l~~~g~~~qk~~~l~~l~~G~~~~~~a~tEp~~aGsd~~~~~t~A~~~~~g~~lnG~K~~is~a~~~~Ad~~~v~art~ 205 (428)
T 2wbi_A 126 VLHLYGSEEQKKQWLEPLLQGNITSCFCMTEPDVASSDATNIECSIQRDEDSYVINGKKWWSSGAGNPKCKIAIVLGRTQ 205 (428)
T ss_dssp HHHHHCCHHHHHHTHHHHHHTSSEEEEECCCTTSCTTSGGGCCCEEEEETTEEEEEEEEEEEETTTSTTEEEEEEEEECC
T ss_pred HHHHhCCHHHHHHHHHHHhCCCeEEEEEEecCCcCCCCcccceEEEEEeCCEEEEEeEEeccCCCCCCcCCEEEEEEEeC
Confidence 356799999999999999999999999999999 999999999999999999999999999999988 99999999986
Q ss_pred CCCCCCCCCCeEEEEEeCCCCCcccch--------------h------------------------------------hh
Q psy13265 79 PDPKCPASKAFTGFIVERDTPGLTPGR--------------K------------------------------------VA 108 (245)
Q Consensus 79 ~~~~~~~~~~~~~f~V~~~~~Gv~~~~--------------~------------------------------------~~ 108 (245)
++++ +++.++++|+||++.|||++.+ . ++
T Consensus 206 ~~~~-~~~~g~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~~~~v~fddv~VP~~~~lg~~g~g~~~~~~~l~~~r~~~a 284 (428)
T 2wbi_A 206 NTSL-SRHKQHSMILVPMNTPGVKIIRPLSVFGYTDNFHGGHFEIHFNQVRVPATNLILGEGRGFEISQGRLGPGRIHHC 284 (428)
T ss_dssp CTTS-CGGGCEEEEEEETTSTTEEEEEECCBTTBCCGGGCCEEEEEEEEEEEEGGGBCSCTTCHHHHHHHHHHHHHHHHH
T ss_pred CccC-CCCCceEEEEEECCCCcEEecCCCCccccCCCCCCCeEEEEeCceEECHHHhcCCccchHHHHHHHHHhHHHHHH
Confidence 4310 1346789999999999987631 2 56
Q ss_pred hhhHHHHHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-C-CCchhHHHHHHHHHHH
Q psy13265 109 AGAVGLAQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDL-G-RRNTLYASVAKALAAD 186 (245)
Q Consensus 109 ~~~lG~~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~-~-~~~~~~~~~~K~~~~~ 186 (245)
+.++|+++++++.+++|++.|++||+|+.++|.+|++++++...++++++++++++..++. + .+....++++|.++++
T Consensus 285 a~~~G~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~g~~~~~~~~~~aK~~a~e 364 (428)
T 2wbi_A 285 MRTVGLAERALQIMCERATQRIAFKKKLYAHEVVAHWIAESRIAIEKIRLLTLKAAHSMDTLGSAGAKKEIAMIKVAAPR 364 (428)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHhhCcccCCChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCCcchHHHHHHHHHHHHH
Confidence 7899999999999999999999999999999999999999999999999999999998876 2 2345578999999999
Q ss_pred HHHHHHHHHHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHHHhhc
Q psy13265 187 VANKCATDAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIEKAKN 244 (245)
Q Consensus 187 ~~~~~~~~~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~~~~ 244 (245)
.+.++++.+++++||.||.+++|++|+|||+++..+++|++++++..|++.+|+.+++
T Consensus 365 ~a~~v~~~a~q~~Gg~G~~~~~~~~r~~Rda~~~~i~~G~~~~~~~~ia~~~l~~~~~ 422 (428)
T 2wbi_A 365 AVSKIVDWAIQVCGGAGVSQDYPLANMYAITRVLRLADGPDEVHLSAIATMELRDQAK 422 (428)
T ss_dssp HHHHHHHHHHHHTGGGGGSTTSSHHHHHHHHHHHTTTTSCHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHhCCcccCCCCcHHHHHHHHhhcEecCChHHHHHHHHHHHHHHHhhh
Confidence 9999999999999999999999999999999999999999999999999999988653
No 23
>1r2j_A Protein FKBI; polyketide synthase, polyketide, acyl-COA dehydrogenase, , aldehyde dehydrogenase, oxidoreductase; HET: FAD; 2.10A {Streptomyces hygroscopicus} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=5.2e-47 Score=326.61 Aligned_cols=231 Identities=29% Similarity=0.401 Sum_probs=209.5
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
+|. +|+++||++|||++.+|+ ++++++|||+.|||+..+.|++++++|||+|||+|.|+|++.+||+++|++++++
T Consensus 85 ~l~-~g~~~q~~~~l~~~~~G~-~~~~a~tEp~~Gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~-- 160 (366)
T 1r2j_A 85 VQR-LGDAGQRATFLKELTSGK-LAAVGFSERQAGSDLSAMRTRVRLDGDTAVVDGHKVWTTAAAYADHLVVFGLQED-- 160 (366)
T ss_dssp HHH-HSCHHHHHHHHHHTTCC--CEEEECCBTTBSSCGGGCCCEEEEETTEEEEEEEEEEETTTTTCSEEEEEEBCSS--
T ss_pred HHH-hCCHHHHHHHHHHHhCCC-eeEEEeCCCCCCCchhhCEeEEEEeCCEEEEEEEEecccCCcccCEEEEEEEeCC--
Confidence 466 999999999999999999 9999999999999999999999999999999999999999999999999998752
Q ss_pred CCCCCCCeEEEEEeCCCCCcccchh------------------------------------------------hhhhhHH
Q psy13265 82 KCPASKAFTGFIVERDTPGLTPGRK------------------------------------------------VAAGAVG 113 (245)
Q Consensus 82 ~~~~~~~~~~f~V~~~~~Gv~~~~~------------------------------------------------~~~~~lG 113 (245)
+ ++++|+||++.|||++.+. +++.++|
T Consensus 161 ---~--g~~~flV~~~~~Gv~~~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~~~~~~~~l~~~r~~~aa~~~G 235 (366)
T 1r2j_A 161 ---G--SGAVVVVPADTPGVRVERVPKPSGCRAAGHADLHLDQVRVPAGAVLAGSGASLPMLVAASLAYGRKSVAWGCVG 235 (366)
T ss_dssp ---S--CCEEEEEETTSTTEEEEECSSCSSSTTSCCEEEEEEEEEEEGGGBCTTTTSCTTTTTHHHHHHHHHHHHHHHHH
T ss_pred ---C--ceEEEEEECCCCCeEecCCcCCccCCCCCeeEEEEeeEEEcHHHcCCCCCccHHHHHHHHhhHHHHHHHHHHHH
Confidence 1 6899999999999988764 4566899
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCchhHHHHHHHHHHHHHHHHH
Q psy13265 114 LAQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLG-RRNTLYASVAKALAADVANKCA 192 (245)
Q Consensus 114 ~~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~-~~~~~~~~~~K~~~~~~~~~~~ 192 (245)
+++++++.+++|++.|++||+|+.++|.+|++++++..+++++++++++++..++.+ .+....++++|.++++.+.+++
T Consensus 236 ~a~~al~~a~~ya~~R~~fg~~i~~~q~v~~~la~~~~~~~~ar~~~~~aa~~~~~g~~~~~~~~~~aK~~a~~~a~~~~ 315 (366)
T 1r2j_A 236 ILRACRTAAVAHARTREQFGRPLGDHQLVAGHIADLWTAEQIAARVCEYASDHWDEGSPEMVPATILAKHVAAERAAAGA 315 (366)
T ss_dssp HHHHHHHHHHHHHTTCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHC-------CHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCcchHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999988876 5556689999999999999999
Q ss_pred HHHHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHHH
Q psy13265 193 TDAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIEK 241 (245)
Q Consensus 193 ~~~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~ 241 (245)
+.+++++||.||.+++|++|+|||+++..+++|++++++..|++.+|+.
T Consensus 316 ~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~~~~G~~~~~~~~ia~~~lgl 364 (366)
T 1r2j_A 316 ATAAQVLASAGAREGHVVERAYRDAKLMEIIEGSSEMCRVMLAQHALAL 364 (366)
T ss_dssp HHHHHHHGGGGC--CCHHHHHHHHHHHHHHSSSCHHHHHHHHHHHHTTC
T ss_pred HHHHHhhCCeeecCCCcHHHHHHhccCceecCCHHHHHHHHHHHHHhcC
Confidence 9999999999999999999999999999999999999999999998864
No 24
>1siq_A GCD, glutaryl-COA dehydrogenase; acyl-COA dehydrogenase, decarboxylation, flavin protein, oxidoreductase; HET: FAD; 2.10A {Homo sapiens} SCOP: a.29.3.1 e.6.1.1 PDB: 2r0n_A* 1sir_A* 2r0m_A*
Probab=100.00 E-value=2.9e-46 Score=324.67 Aligned_cols=233 Identities=33% Similarity=0.534 Sum_probs=218.5
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEe--CCeEEEeeeeecccCCCcccEEEEEEEeCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKK--GDEWILNGQKMWITNGGVANWYFVLARTNP 79 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~--~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~ 79 (245)
+|..+|+++||++|||++.+|+.++++++|||+.|||+..+.|+++++ +|||+|||+|.|+|++.+||+++|++++++
T Consensus 105 ~l~~~g~~~q~~~~l~~l~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~~~g~~lnG~K~~vs~~~~Ad~~~v~a~~~~ 184 (392)
T 1siq_A 105 PIYAYGSEEQRQKYLPQLAKGELLGCFGLTEPNSGSDPSSMETRAHYNSSNKSYTLNGTKTWITNSPMADLFVVWARCED 184 (392)
T ss_dssp HHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEEEEEEEEETGGGCSEEEEEEEETT
T ss_pred HHHHhCCHHHHHHHHHHHhCCCeEEEEEECCCCCCcCccccEEEEEEeCCCCEEEEEEEEEeecCCcccCEEEEEEEECC
Confidence 467799999999999999999999999999999999999999999999 999999999999999999999999999852
Q ss_pred CCCCCCCCCeEEEEEeCCCCCcccchh----------------------------------------------hhhhhHH
Q psy13265 80 DPKCPASKAFTGFIVERDTPGLTPGRK----------------------------------------------VAAGAVG 113 (245)
Q Consensus 80 ~~~~~~~~~~~~f~V~~~~~Gv~~~~~----------------------------------------------~~~~~lG 113 (245)
.++++|+||++.|||++.+. +++.++|
T Consensus 185 -------g~~~~flV~~~~pGv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~g~~~~~~~l~~~r~~~aa~~~G 257 (392)
T 1siq_A 185 -------GCIRGFLLEKGMRGLSAPRIQGKFSLRASATGMIIMDGVEVPEENVLPGASSLGGPFGCLNNARYGIAWGVLG 257 (392)
T ss_dssp -------SCEEEEEEETTCTTEECCBCCCCSSSTTSCEEEEEEEEEEEEGGGBCTTCCSSHHHHHHHHHHHHHHHHHHHH
T ss_pred -------CCEEEEEEeCCCCCeEeccccccccccCCceEEEEEccEEECHHHcCCcccCHHHHHHHHHHHHHHHHHHHHH
Confidence 14789999999999988664 4566899
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHH
Q psy13265 114 LAQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRRNTLYASVAKALAADVANKCAT 193 (245)
Q Consensus 114 ~~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~ 193 (245)
+++++++.+++|++.|++||+|+.++|.+|++++++.+.++++++++++++..++.+.+....++++|.++++.+.++++
T Consensus 258 ~a~~al~~a~~ya~~R~~fG~~i~~~q~vq~~la~~~~~~~~ar~~~~~aa~~~d~~~~~~~~~~~aK~~~~~~a~~v~~ 337 (392)
T 1siq_A 258 ASEFCLHTARQYALDRMQFGVPLARNQLIQKKLADMLTEITLGLHACLQLGRLKDQDKAAPEMVSLLKRNNCGKALDIAR 337 (392)
T ss_dssp HHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCHHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhcCeeCCcchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHH
Confidence 99999999999999999999999999999999999999999999999999999988766666789999999999999999
Q ss_pred HHHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHHH
Q psy13265 194 DAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIEK 241 (245)
Q Consensus 194 ~~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~ 241 (245)
.+++++||.||.+++|++|+|||+++..+++|++++++..|++.+++.
T Consensus 338 ~a~q~~Gg~g~~~~~~l~r~~Rd~~~~~~~~G~~~~~~~~i~~~llgl 385 (392)
T 1siq_A 338 QARDMLGGNGISDEYHVIRHAMNLEAVNTYEGTHDIHALILGRAITGI 385 (392)
T ss_dssp HHHHHTGGGGGSGGGSHHHHHHHHHHHTTSSSCHHHHHHHHHHHHHSC
T ss_pred HHHHHhCCccccCCCcHHHHHhhCcCCeeecCcHHHHHHHHHHHHhCc
Confidence 999999999999999999999999999999999999999999999863
No 25
>3mpi_A Glutaryl-COA dehydrogenase; alpha-beta fold, oxidoreductase; HET: FAD GRA; 2.05A {Desulfococcus multivorans} PDB: 3mpj_A*
Probab=100.00 E-value=1.3e-46 Score=327.40 Aligned_cols=235 Identities=40% Similarity=0.679 Sum_probs=219.8
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
+|+.+|+++||++|||++.+|+.++++++|||+.|||...+.+++++++|||+|||+|.|+|++.+||+++|++++++++
T Consensus 100 ~l~~~g~~~q~~~~l~~~~~g~~~~~~a~tEp~~gsd~~~~~t~A~~~~~g~~lnG~K~~~s~~~~Ad~~~v~a~~~~~~ 179 (397)
T 3mpi_A 100 TILTYGSEALKKKYVPKLSSAEFLGGFGITEPDAGSDVMAMSSTAEDKGDHWLLNGSKTWISNAAQADVLIYYAYTDKAA 179 (397)
T ss_dssp HHHHHSCHHHHHHHHHHHHTTSSCCCEECCBTTBSSCGGGCCCEEEECSSEEEEEEEEEEEETTTTCSSEEEEEESCGGG
T ss_pred HHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeEEEEEeCCEEEEEEEEEeeCCCcccCEEEEEEEcCCCC
Confidence 56789999999999999999999999999999999999999999999999999999999999999999999999987542
Q ss_pred CCCCCCCeEEEEE-eCCCCCcccchh-----------------------------------------------hhhhhHH
Q psy13265 82 KCPASKAFTGFIV-ERDTPGLTPGRK-----------------------------------------------VAAGAVG 113 (245)
Q Consensus 82 ~~~~~~~~~~f~V-~~~~~Gv~~~~~-----------------------------------------------~~~~~lG 113 (245)
+..++++|+| |++.|||++ +. +++.++|
T Consensus 180 ---~~~g~~~flV~~~~~~Gv~v-~~~~~~G~~~~~~~~v~fddv~Vp~~~~lg~~~~g~~~~~~~~~~~r~~~aa~~lG 255 (397)
T 3mpi_A 180 ---GSRGLSAFVIEPRNFPGIKT-SNLEKLGSHASPTGELFLDNVKVPKENILGKPGDGARIVFGSLNHTRLSAAAGGVG 255 (397)
T ss_dssp ---GGGSEEEEEECTTTSTTEEE-EECCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ---CCCceEEEEEEcCCCCCeEe-ccCccccCcCCceeEEEEeeEEECHHHcCCCCCchHHHHHHHHHHHHHHHHHHHHH
Confidence 4568999999 999999987 33 5677899
Q ss_pred HHHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC-CCchhHHHHHHHHHHHHHHHHH
Q psy13265 114 LAQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLG-RRNTLYASVAKALAADVANKCA 192 (245)
Q Consensus 114 ~~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~-~~~~~~~~~~K~~~~~~~~~~~ 192 (245)
+++++++.+++|++.|++||+++.++|.+|++++++...++++++++++++..++.+ .+.....+++|.++++.+.+++
T Consensus 256 ~a~~al~~a~~~a~~R~~fg~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~~~~~~~~aK~~a~~~a~~~~ 335 (397)
T 3mpi_A 256 LAQACLDAAIKYCNERRQFGKPIGDFQMNQDMIAQMAVEVEAARLLAYKAAAAKDEGRLNNGLDVAMAKYAAGEAVSKCA 335 (397)
T ss_dssp HHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCTEEHHHHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHhhCcccCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCCccHHHHHHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999999999999887 5556689999999999999999
Q ss_pred HHHHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHH-HHHHHH
Q psy13265 193 TDAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVS-RAIIEK 241 (245)
Q Consensus 193 ~~~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~-~~~l~~ 241 (245)
+.+++++||.||.+++|++|+|||+++..+++|++++++..|+ +.+ +.
T Consensus 336 ~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~i~~Gt~ei~~~~ia~~~l-gl 384 (397)
T 3mpi_A 336 NYAMRILGAYGYSTEYPVARFYRDAPTYYMVEGSANICKMIIALDQL-GV 384 (397)
T ss_dssp HHHHHHHGGGGGSTTSHHHHHHHHTTHHHHSSSCHHHHHHHHHHHHH-TS
T ss_pred HHHHHHhCCeeecCCCCHHHHHhhccceeeecCHHHHHHHHHHHHhc-CC
Confidence 9999999999999999999999999999999999999999999 665 53
No 26
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=100.00 E-value=3e-46 Score=338.50 Aligned_cols=234 Identities=40% Similarity=0.707 Sum_probs=215.9
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEe--CCeEEEeeeeecccCCCcccEEEEEEEeCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKK--GDEWILNGQKMWITNGGVANWYFVLARTNP 79 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~--~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~ 79 (245)
+|..+|+++||++|||++++|++++++++|||++|||+.++.|+|+++ +++|+|||+|+|+|+++.||+++|++++++
T Consensus 120 ~l~~~Gt~eQk~~~Lp~l~~G~~~~a~alTEp~aGSD~~~~~t~A~~~~dG~~~vLnG~K~~it~a~~Ad~~~V~Ar~~g 199 (577)
T 2z1q_A 120 PLVYFGTEEQKRKYLPKLASGEWIAAYCLTEPGSGSDALAAKTRATLSEDGKHYILNGVKQWISNAGFAHLFTVFAKVDG 199 (577)
T ss_dssp HHHHHCCHHHHHTTHHHHHHTSSCEEEECCBTTBSSSGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEETT
T ss_pred HHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccCeeEEEEeCCCCEEEEEEEeeCCCCCCccCEEEEEEEeCC
Confidence 577899999999999999999999999999999999999999999984 558999999999999999999999999852
Q ss_pred CCCCCCCCCeEEEEEeCCCCCcccchh-----------------------------------------------hhhhhH
Q psy13265 80 DPKCPASKAFTGFIVERDTPGLTPGRK-----------------------------------------------VAAGAV 112 (245)
Q Consensus 80 ~~~~~~~~~~~~f~V~~~~~Gv~~~~~-----------------------------------------------~~~~~l 112 (245)
.++++|+||++.|||++.+. +++.++
T Consensus 200 -------~gis~flVp~~~pGv~v~~~~~~~G~~~~~~~~v~fddv~VP~~~llg~~g~g~~~~~~~l~~~R~~~aa~~~ 272 (577)
T 2z1q_A 200 -------EHFTAFLVERDTPGLSFGPEEKKMGIKASSTRQVILEDVKVPVENVLGEIGKGHKIAFNVLNVGRYKLGAGAV 272 (577)
T ss_dssp -------TEEEEEEEETTCTTEEECCCCCBSSCTTSCEEEEEEEEEEEEGGGEESCTTCTHHHHHHHHHHHHHHHHHHHH
T ss_pred -------CeeEEEEEeCCCCCeEecCCCCCCCCCCCceeEEEecceeccHHHccCCCCchHHHHHHHHHHHHHHHHHHHH
Confidence 47899999999999988765 567889
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcC--------------CCchhHHH
Q psy13265 113 GLAQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLG--------------RRNTLYAS 178 (245)
Q Consensus 113 G~~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~--------------~~~~~~~~ 178 (245)
|+++++++.+++|++.|++||+|+.++|.+|++|+++.+.++++++++++++..++.+ .+....++
T Consensus 273 G~a~~al~~a~~ya~~R~qfg~pi~~~q~vq~~La~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~a 352 (577)
T 2z1q_A 273 GGAKRALELSAQYATQRVQFGRPIGRFGLIQQKLGEMASRIYAAESAVYRTVGLIDEALLGKKGPEAVMAGIEEYAVEAS 352 (577)
T ss_dssp HHHHHHHHHHHHHHHHCBCSSSBGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSHHHHHHHHHTTHHHHH
T ss_pred HHHHHHHHHHHHHHHhCccCCCchhhhHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCcccccchhhhhcchhhHHHHH
Confidence 9999999999999999999999999999999999999999999999999999888754 12345688
Q ss_pred HHHHHHHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHHHh
Q psy13265 179 VAKALAADVANKCATDAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIEKA 242 (245)
Q Consensus 179 ~~K~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~~ 242 (245)
++|.++++.+.++++.+++++||.||..++|++|+|||++...+++|++++++..|++.++++.
T Consensus 353 ~aK~~ase~a~~v~~~a~qi~GG~G~~~e~~l~r~~Rda~~~~i~eGt~~i~~~~ia~~~l~~~ 416 (577)
T 2z1q_A 353 IIKVLGSEVLDYVVDEGVQIHGGYGYSQEYPIERAYRDARINRIFEGTNEINRLLIPGMLLRRA 416 (577)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHGGGGGBTTSHHHHHHHHHGGGGTTTSCHHHHHHHTTGGGSCC-
T ss_pred HHHHHHHHHHHHHHHHHHHHhCCeeecCCChHHHHHhhCcceeeeCcHHHHHHHHHHHHHHHHH
Confidence 9999999999999999999999999999999999999999999999999999999998887553
No 27
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=100.00 E-value=6.9e-45 Score=330.60 Aligned_cols=239 Identities=33% Similarity=0.526 Sum_probs=216.8
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeC--CeEEEeeeeecccCCCcccEEEEEEEeCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKG--DEWILNGQKMWITNGGVANWYFVLARTNP 79 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~--~g~~l~G~K~~~s~~~~ad~~lv~a~~~~ 79 (245)
+|..+|+++||++|||++++|++++++++|||+.|||+..+.|+|++++ ++|+|||+|+|+|+++.||+++|+|++++
T Consensus 140 ~l~~~Gt~eqk~~~Lp~l~~G~~~~~~alTEp~aGSD~~~~~t~A~~~~dG~~y~LnG~K~~is~~~~Ad~~lV~Ar~~~ 219 (607)
T 2uxw_A 140 GILLFGTKAQKEKYLPKLASGETVAAFCLTEPSSGSDAASIRTSAVPSPCGKYYTLNGSKLWISNGGLADIFTVFAKTPV 219 (607)
T ss_dssp HHHHHCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEECTTSSEEEEEEEEEEEETTTTCSEEEEEEEEEE
T ss_pred HHHHhCCHHHHHHHHHHHhCCCeEEEEEecCCCCCCCcccceeEEEEeCCCCEEEEEeEEEeecCCcccCEEEEEEEecC
Confidence 4677999999999999999999999999999999999999999999873 47999999999999999999999999853
Q ss_pred CCC--CCCCCCeEEEEEeCCCCCcccchh-----------------------------------------------hhhh
Q psy13265 80 DPK--CPASKAFTGFIVERDTPGLTPGRK-----------------------------------------------VAAG 110 (245)
Q Consensus 80 ~~~--~~~~~~~~~f~V~~~~~Gv~~~~~-----------------------------------------------~~~~ 110 (245)
.+. .++.+++++|+||++.|||++.+. +++.
T Consensus 220 ~~~~~g~~~~gis~flVp~~~~Gv~v~~~~~~~G~rg~~t~~v~fddv~VP~~~llG~~g~G~~~~~~~l~~~Rl~~aa~ 299 (607)
T 2uxw_A 220 TDPATGAVKEKITAFVVERGFGGITHGPPEKKMGIKASNTAEVFFDGVRVPSENVLGEVGSGFKVAMHILNNGRFGMAAA 299 (607)
T ss_dssp ECTTTCCEEEEEEEEEEEGGGSSEEECCCCCCSSCTTSCEEEEEEEEEEEEGGGEESSTTCHHHHHHHHHHHHHHHHHHH
T ss_pred CCcccCCCCCceEEEEEeCCCCCeEEecCccccCCCCCCeeEEEeccEEecHHHhcCCCCchHHHHHHHHHHHHHHHHHH
Confidence 210 011458999999999999988765 5778
Q ss_pred hHHHHHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC-chhHHHHHHHHHHHHHH
Q psy13265 111 AVGLAQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRR-NTLYASVAKALAADVAN 189 (245)
Q Consensus 111 ~lG~~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~-~~~~~~~~K~~~~~~~~ 189 (245)
++|+++++++.+++|++.|++||+|++++|.+|++|++|.+.+++++++++.++..++.+.+ ......++|.++++.+.
T Consensus 300 ~~G~a~~al~~a~~ya~~R~qfG~pi~~~~~vq~~La~~~~~~eaaral~~~aa~~~d~~~~~~~~~~~~aK~~~se~a~ 379 (607)
T 2uxw_A 300 LAGTMRGIIAKAVDHATNRTQFGEKIHNFGLIQEKLARMVMLQYVTESMAYMVSANMDQGATDFQIEAAISKIFGSEAAW 379 (607)
T ss_dssp HHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCSCCHHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHhccccCCchhhcHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcCCccHHHHHHHHHHHHHHHHH
Confidence 89999999999999999999999999999999999999999999999999999998887543 34678999999999999
Q ss_pred HHHHHHHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHH
Q psy13265 190 KCATDAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIE 240 (245)
Q Consensus 190 ~~~~~~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~ 240 (245)
++++.+++++||.||.+++|++|+|||++...+++|++++++..|++..+.
T Consensus 380 ~v~~~a~qv~GG~G~~~e~~l~r~~Rda~~~~i~eGt~~i~~~~ia~~glq 430 (607)
T 2uxw_A 380 KVTDECIQIMGGMGFMKEPGVERVLRDLRIFRIFEGTNDILRLFVALQGCM 430 (607)
T ss_dssp HHHHHHHHHHTHHHHSSTTSHHHHHHHHGGGGTSSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHhCCccccCccHHHHHHHhcccceeeCChHHHHHHHHHHHHHH
Confidence 999999999999999999999999999999999999999999999766654
No 28
>3mkh_A Nitroalkane oxidase; oxidoreductase flavoenzyme, acyl-COA dehydrogen flavoprotein, oxidoreductase; HET: FAD; 2.00A {Podospora anserina}
Probab=100.00 E-value=4.7e-44 Score=314.99 Aligned_cols=239 Identities=28% Similarity=0.443 Sum_probs=214.5
Q ss_pred hhhhcCCHHHHHHHhhhhhcC--CceeEEEecCCCCCC-----CCCCceeEEEEeCCeEEEeeeeecccCCC-----ccc
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEE--PIVAAYCVTEPGAGS-----DVNGVKTKAVKKGDEWILNGQKMWITNGG-----VAN 69 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g--~~~~~~~~tE~~~gs-----d~~~~~~~a~~~~~g~~l~G~K~~~s~~~-----~ad 69 (245)
+|+.+|+++ |++||+++++| +.++++++|||+.|| |+.++.|+|++++|||+|||+|.|+|++. .||
T Consensus 105 ~l~~~g~~~-~~~~l~~~~~G~g~~~~~~a~tEp~~gs~~~~sd~~~~~t~A~~~g~g~~lnG~K~~is~a~~~~~~~Ad 183 (438)
T 3mkh_A 105 PINLAAGPQ-HAEFLAPFLSGEGSPLASLVFSEPGGVANALEKGAPGFQTTARLEGDEWVINGEKMWATNCAGWDFKGCD 183 (438)
T ss_dssp HHHHHCCGG-GHHHHGGGSSSCSCCCEEEECCCTTCCTTTTCTTSCCCSCEEEEETTEEEEEEEECSCTTTTCTTSSCCS
T ss_pred HHHhhCCHH-HHHHHHHHhcCCCCceEEEEEccCCCCCCccccccccceeEEEEeCCEEEEEeEEEEecCCCccccccCc
Confidence 467899999 99999999996 589999999999998 57889999999999999999999999998 899
Q ss_pred EEEEEEEeCCC---CCCCCCCCeEEEEEeCCC-----CC-cccchh----------------------------------
Q psy13265 70 WYFVLARTNPD---PKCPASKAFTGFIVERDT-----PG-LTPGRK---------------------------------- 106 (245)
Q Consensus 70 ~~lv~a~~~~~---~~~~~~~~~~~f~V~~~~-----~G-v~~~~~---------------------------------- 106 (245)
+++|+++++.. ...+...++++|+||++. || |++.+.
T Consensus 184 ~~~v~a~~~~~~~~~~~~~~~g~~~flV~~~~~~~~~pG~v~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~g~ 263 (438)
T 3mkh_A 184 LACVVCRDATTPLEEGQDPENKVMIILVTRADLDRNGEGSFEVLRHVATPGHTSVSGPHVRYTNVRVPTKNVLCPAGQGA 263 (438)
T ss_dssp EEEEEEEECSSCCCTTCCGGGGEEEEEEEHHHHHHHCTTSEEEEECCCCSSCTTCCCCEEEEEEEEEEGGGEEECTTTHH
T ss_pred EEEEEEEecCcccCcccCCCCceEEEEEecCccccCCCCcEEecCcCCCcCCcCCCceEEEECcEEECHHHcCCCCCchH
Confidence 99999998641 101234679999999875 88 877543
Q ss_pred -------------hhhhhHHHHHHHHHHHHHHHHHhhhcC-CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCC
Q psy13265 107 -------------VAAGAVGLAQRCLDEATKYALERKAFG-VPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRR 172 (245)
Q Consensus 107 -------------~~~~~lG~~~~al~~~~~~~~~r~~~g-~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~ 172 (245)
+++.++|+++++++.+++|++.|++|| +|+.++|.+|++|+++.++++++++++++++..++.+..
T Consensus 264 ~~~~~~l~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~g~~pi~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~ 343 (438)
T 3mkh_A 264 KVAFGAFDGSAVLVGAMGVGLMRAAFDAALKFAKEDNRGGAVPLLERQAFADLLSGVKIQTEAARALTWKAAHAMENGPG 343 (438)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTCSSCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSS
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhcEeCCCeeccccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCC
Confidence 678899999999999999999999998 999999999999999999999999999999999987654
Q ss_pred c---hh-HHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHhhccccccCChH-HHHHHHHHHHHHHH
Q psy13265 173 N---TL-YASVAKALAADVANKCATDAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTA-QIQRLIVSRAIIEK 241 (245)
Q Consensus 173 ~---~~-~~~~~K~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~-~~~~~~i~~~~l~~ 241 (245)
. .. .++++|.++++.+.++++.+++++||.||.+++|++|+|||+++..+++|++ ++++.+|++.+|++
T Consensus 344 ~~~~~~~~~~~aK~~a~e~a~~~~~~a~q~~Gg~G~~~~~~l~r~~Rda~~~~i~~Gt~~~v~~~~i~r~ll~~ 417 (438)
T 3mkh_A 344 DYDARRELALAAKVFCSEAAVKACTDVINAVGISAYDLQRPFSDLLNTAVVLPIFDGGNVGIRRRHLQQLMLKP 417 (438)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGCTTSSHHHHHHHHTHHHHSSSCTTTTHHHHHHHHHHST
T ss_pred cchhHHHHHHHHHHHHHHHHHHHHHHHHHHhchhhccCCCcHHHHHHHhheeeeecCChHHHHHHHHHHHHHhc
Confidence 3 12 3678999999999999999999999999999999999999999999999998 99999999999986
No 29
>3djl_A Protein AIDB; alpha helix, beta-barrel, FAD, flavoprotein, oxidoreductase; HET: FAD; 1.70A {Escherichia coli} PDB: 3u33_A*
Probab=100.00 E-value=2.9e-43 Score=315.67 Aligned_cols=229 Identities=24% Similarity=0.342 Sum_probs=213.2
Q ss_pred hhhcCCHHHHHHHhhhhhcCCc-------------eeEEEecCCCCCCCCCCceeEEEEe-CCeEEEeeeeecccCCCcc
Q psy13265 3 VVIAGNEAQQKKYLGRLVEEPI-------------VAAYCVTEPGAGSDVNGVKTKAVKK-GDEWILNGQKMWITNGGVA 68 (245)
Q Consensus 3 l~~~g~~~~k~~~l~~~~~g~~-------------~~~~~~tE~~~gsd~~~~~~~a~~~-~~g~~l~G~K~~~s~~~~a 68 (245)
|..+| ++||++|+|++.+|+. ++++++|||++|||+.++.|+|+++ +|+|+|||+|+|+| +.+|
T Consensus 145 L~~~g-~eqk~~~lp~l~sge~~p~~~~~~~~~g~~~~~a~TEp~~GSDl~~~~T~A~~~~~g~y~LnG~K~f~S-a~~A 222 (541)
T 3djl_A 145 LLQML-PAPFQDWTTPLLSDRYDSHLLPGGQKRGLLIGMGMTEKQGGSDVMSNTTRAERLEDGSYRLVGHKWFFS-VPQS 222 (541)
T ss_dssp HHHHC-CGGGGGGHHHHTCSCCCCCSSCGGGSSSCCEEEECCBTTBSSCGGGCCCEEEECTTSCEEEEEEEEEEE-CTTS
T ss_pred HHHcC-HHHHHHHHHHHhCCCcccccccccccccceeEEEeccCCcCCCcccceeEEEEcCCCeEEEEEEEEeec-cccc
Confidence 56688 9999999999999998 8999999999999999999999999 78999999999999 9999
Q ss_pred cEEEEEEEeCCCCCCCCCCCeEEEEEeCCCC-----Ccccchh-------------------------------------
Q psy13265 69 NWYFVLARTNPDPKCPASKAFTGFIVERDTP-----GLTPGRK------------------------------------- 106 (245)
Q Consensus 69 d~~lv~a~~~~~~~~~~~~~~~~f~V~~~~~-----Gv~~~~~------------------------------------- 106 (245)
|+++|+|+++ .++++|+||++.| ||++.+.
T Consensus 223 d~~lVlArt~--------~Gis~flVp~~~p~~~~~Gv~i~~~~~~~G~rgt~s~~v~fddv~~~llG~~g~G~~~~~~~ 294 (541)
T 3djl_A 223 DAHLVLAQTA--------GGLSCFFVPRFLPDGQRNAIRLERLKDKLGNRSNASCEVEFQDAIGWLLGLEGEGIRLILKM 294 (541)
T ss_dssp SEEEEEEEET--------TEEEEEEEESBCTTSCBCSEEEEEECCCSSCTTSCEEEEEEEEEEEEEESSTTCHHHHTHHH
T ss_pred CEEEEEEEEC--------CceEEEEEecCCCCCCcCCeEEeeccccCCCcCCceeEEEEccceeeeeecCCchHHHHHHH
Confidence 9999999985 3689999999998 9988665
Q ss_pred -------hhhhhHHHHHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc------
Q psy13265 107 -------VAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRRN------ 173 (245)
Q Consensus 107 -------~~~~~lG~~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~~------ 173 (245)
+++.++|+++++++.+++|++.|++||+++.++|.+|++|+++.+.++++++++++++..++...+.
T Consensus 295 l~~~Rl~~aa~~~G~a~~al~~a~~ya~~R~~fG~~i~~~p~vq~~La~~~~~~eaaral~~~aa~~~d~~~~~~~~~~~ 374 (541)
T 3djl_A 295 GGMTRFDCALGSHAMMRRAFSLAIYHAHQRHVFGNPLIQQPLMRHVLSRMALQLEGQTALLFRLARAWDRRADAKEALWA 374 (541)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEETTEEGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTTSHHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhhCccCCCchhhCHHHHHHHHHHHHHHHHHHHHHHHHHHHHhccCChhhHHHH
Confidence 5678999999999999999999999999999999999999999999999999999999999876432
Q ss_pred hhHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHhhccccccCChHHHHHHHHHHHHHHH
Q psy13265 174 TLYASVAKALAADVANKCATDAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQIQRLIVSRAIIEK 241 (245)
Q Consensus 174 ~~~~~~~K~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~~~~~i~~~~l~~ 241 (245)
...++++|.++++.+.++++.+++++||.||.+++|++|+|||++...+++|++++++..|+|.+++.
T Consensus 375 ~~~~~~aK~~ase~a~~~~~~a~q~~Gg~G~~~e~~l~r~~Rda~~~~i~eGt~ei~~~~i~r~l~~~ 442 (541)
T 3djl_A 375 RLFTPAAKFVICKRGMPFVAEAMEVLGGIGYCEESELPRLYREMPVNSIWEGSGNIMCLDVLRVLNKQ 442 (541)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGSTTSHHHHHHHHHHHHHHGGGHHHHHHHHHHHHHHHC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHhhCCeeecCCCcHHHHHHhhhhhheeCCcHHHHHHHHHHHHHhC
Confidence 23478999999999999999999999999999999999999999999999999999999999998754
No 30
>2c12_A Nitroalkane oxidase; oxidoreductase, flavoenzyme, acyl-COA dehydrogenase, long cell EDGE, FAD, inhibitor, flavoprotein; HET: SPM FAD PE4; 2.07A {Fusarium oxysporum} SCOP: a.29.3.1 e.6.1.1 PDB: 2c0u_A* 2zaf_A* 2reh_A* 3d9g_A* 3d9f_A* 3d9d_A* 3d9e_A* 3fcj_A*
Probab=100.00 E-value=1.4e-42 Score=305.71 Aligned_cols=238 Identities=27% Similarity=0.444 Sum_probs=210.2
Q ss_pred hhhhcCCHHHHHHHhhhhh--cCCceeEEEecCCCCCC-----CCCCceeEEEEeCCeEEEeeeeecccCCC-----ccc
Q psy13265 2 PVVIAGNEAQQKKYLGRLV--EEPIVAAYCVTEPGAGS-----DVNGVKTKAVKKGDEWILNGQKMWITNGG-----VAN 69 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~--~g~~~~~~~~tE~~~gs-----d~~~~~~~a~~~~~g~~l~G~K~~~s~~~-----~ad 69 (245)
+|..+|+++||++|||++. +|+.++++++|||+.|| |...+.|++++++|||+|||+|.|+|++. +||
T Consensus 103 ~l~~~g~~~q~~~~l~~~~~~~G~~~~~~a~tEp~~Gs~~~~sd~~~~~t~A~~~~~g~~lnG~K~~is~~~~~~~~~Ad 182 (439)
T 2c12_A 103 PVILCDSPSLQEKFLKPFISGEGEPLASLMHSEPNGTANWLQKGGPGLQTTARKVGNEWVISGEKLWPSNSGGWDYKGAD 182 (439)
T ss_dssp HHHHSSCHHHHHHHTGGGGSSCSCCCEEEECCCTTCSTTTTCTTSCCCSCEEEEETTEEEEEEEEECCTTTTTTTSSCCS
T ss_pred HHHHhCCHHHHHHHHHHHhhcCCCEEEEEEecCCCCCCCccccccccceeEEEEcCCEEEEEeEEEeecCCCccccccCc
Confidence 4677999999999999999 69999999999999987 47778999999999999999999999997 899
Q ss_pred EEEEEEEe-C----CCC-CCCCCCCeEEEEEeCCCC------Ccccchh-------------------------------
Q psy13265 70 WYFVLART-N----PDP-KCPASKAFTGFIVERDTP------GLTPGRK------------------------------- 106 (245)
Q Consensus 70 ~~lv~a~~-~----~~~-~~~~~~~~~~f~V~~~~~------Gv~~~~~------------------------------- 106 (245)
+++|++++ + ++. ..+++.++++|+||++.| |+++.+.
T Consensus 183 ~~~v~ar~~~~~~~~~~~~~~~~~g~~~flV~~~~pGv~~~~Gv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~ 262 (439)
T 2c12_A 183 LACVVCRVSDDPSKPQDPNVDPATQIAVLLVTRETIANNKKDAYQILGEPELAGHITTSGPHTRFTEFHVPHENLLCTPG 262 (439)
T ss_dssp EEEEEEEECSCTTSCCCTTSCGGGGEEEEEECHHHHHTSCGGGEEEEECCCBSSCTTCCCCEEEEEEEEEEGGGBCSCTT
T ss_pred EEEEEEEcCCcccCccccccCCCCceEEEEEECCCCcccCCCceEeCCcccccccCCCCceEEEEccEEecHHHcCCCCC
Confidence 99999998 5 220 001345789999999999 5555543
Q ss_pred -----------------hhhhhHHHHHHHHHHHHHHHHH-hhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Q psy13265 107 -----------------VAAGAVGLAQRCLDEATKYALE-RKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVD 168 (245)
Q Consensus 107 -----------------~~~~~lG~~~~al~~~~~~~~~-r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~ 168 (245)
+++.++|+++++++.+++|++. |.+||+|+.++|.+|++|+++.+.++++++++++++..++
T Consensus 263 ~g~~~~~~~~l~~~r~~~aa~~~G~a~~al~~a~~ya~~rr~~~G~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~ 342 (439)
T 2c12_A 263 LKAQGLVETAFAMSAALVGAMAIGTARAAFEEALVFAKSDTRGGSKHIIEHQSVADKLIDCKIRLETSRLLVWKAVTTLE 342 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCTTSSSCGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHHHT
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhceeeCCeehhccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 4677899999999999999997 6788999999999999999999999999999999999998
Q ss_pred cCCCc----hhHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHhhccccccCChH-HHHHHHHHHHHH
Q psy13265 169 LGRRN----TLYASVAKALAADVANKCATDAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTA-QIQRLIVSRAII 239 (245)
Q Consensus 169 ~~~~~----~~~~~~~K~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~-~~~~~~i~~~~l 239 (245)
.+.+. ...++++|.++++.+.++++.+++++||.||.+++|++|+|||+++..+++|++ ++++..|++.+.
T Consensus 343 ~~~~~~~~~~~~~~~aK~~a~~~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~i~~G~~~~~~~~~i~~~l~ 418 (439)
T 2c12_A 343 DEALEWKVKLEMAMQTKIYTTDVAVECVIDAMKAVGMKSYAKDMSFPRLLNEVMCYPLFDGGNIGLRRRQMQRVMA 418 (439)
T ss_dssp CTTSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCGGGGBTTSSHHHHHHHHTTTTTSSSCTTTTHHHHHHHHHT
T ss_pred CCCccchhhHHHHHHHHHHHHHHHHHHHHHHHHhcCceEEcCCChHHHHHHhhhcceeecCChHHHHHHHHHHHHh
Confidence 76543 235789999999999999999999999999999999999999999999999988 699988887654
No 31
>2ddh_A Acyl-COA oxidase; beta barrel, alpha UP-DOWN bundle, oxidoreductase; HET: FAD HXD; 2.07A {Rattus norvegicus} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 1is2_A*
Probab=100.00 E-value=8.4e-43 Score=319.46 Aligned_cols=240 Identities=20% Similarity=0.260 Sum_probs=216.2
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEe--CCeEEEe-----eeeecccC-CCcccEEEE
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKK--GDEWILN-----GQKMWITN-GGVANWYFV 73 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~--~~g~~l~-----G~K~~~s~-~~~ad~~lv 73 (245)
+|+.+|+++||++|||++.+|++++|+++|||++|||+.+++|+|+++ +|||+|| |+|+|+|+ +.+||+++|
T Consensus 110 ~i~~~Gt~eq~~~~L~~i~~Ge~~g~~a~TE~g~GSd~~~l~TtA~~d~~~~~~vLntP~~~G~K~wis~~a~~Ad~~vV 189 (661)
T 2ddh_A 110 TLLHQATAEQQERFFMPAWNLEITGTYAQTEMGHGTHLRGLETTATYDPKTQEFILNSPTVTSIKWWPGGLGKTSNHAIV 189 (661)
T ss_dssp HHC-CCCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSSTTSEECCTTTTTTCSEEEE
T ss_pred HHHHhCCHHHHHHHHHHHhCCCeeEEEeeccCCcCcCcccceeEEEEcCCCCeEEEcCCCCCeEEEecCCCcccCCEEEE
Confidence 577899999999999999999999999999999999999999999998 7899999 99999999 789999999
Q ss_pred EEEeCCCCCCCCCCCeEEEEEeC-C------CCCcccchh----------------------------------------
Q psy13265 74 LARTNPDPKCPASKAFTGFIVER-D------TPGLTPGRK---------------------------------------- 106 (245)
Q Consensus 74 ~a~~~~~~~~~~~~~~~~f~V~~-~------~~Gv~~~~~---------------------------------------- 106 (245)
+|+++.++ ++.|+++|+||+ + .|||++.+.
T Consensus 190 ~Ar~~~~~---~~~G~~~FlVp~rd~~~~~~~pGV~v~~~~~k~Gl~g~~~~~v~Fd~VrVP~~~lLg~~~~v~~~G~~~ 266 (661)
T 2ddh_A 190 LAQLITQG---ECYGLHAFVVPIREIGTHKPLPGITVGDIGPKFGYEEMDNGYLKMDNYRIPRENMLMKYAQVKPDGTYV 266 (661)
T ss_dssp EEEEEETT---EEEEEEEEEEECBCTTTCCBCTTEEEEECCCCSSCTTCCCEEEEESSEEEEGGGBCCSSCEECTTCCEE
T ss_pred EEEEccCC---CCCceEEEEEecccccCCCCCCCeEEecCcccccCCCCcceEEEeccEEECHHHhcCcccccCCCCcee
Confidence 99986432 456899999995 4 799988775
Q ss_pred ------------------hhhhhHHHHHHHHHHHHHHHHHhhhcCC-------CCcccHHHHHHHHHHHHHHHHHHHHHH
Q psy13265 107 ------------------VAAGAVGLAQRCLDEATKYALERKAFGV-------PIAAHQAVAFMLADMAIGIEASRLTWM 161 (245)
Q Consensus 107 ------------------~~~~~lG~~~~al~~~~~~~~~r~~~g~-------~~~~~~~~q~~lae~~~~l~~~~al~~ 161 (245)
+++.++|+++++++.+++|++.|++||. ++.++|.+|++|+++.+.+++++++++
T Consensus 267 ~~~~~~~~~~~l~~~R~~iaa~~~G~a~~al~~a~~ya~~R~qfg~~~~~~e~~i~~~q~vq~rLa~~~a~~~aar~~~~ 346 (661)
T 2ddh_A 267 KPLSNKLTYGTMVFVRSFLVGNAAQSLSKACTIAIRYSAVRRQSEIKQSEPEPQILDFQTQQYKLFPLLATAYAFHFVGR 346 (661)
T ss_dssp CCC--------CHHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCSSTTSCCCBGGGSHHHHHHHHHHHHHHHHHHHHHH
T ss_pred ccchHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhCcccCCCCCCccccccccHHHHHHHHHHHHHHHHHHHHHH
Confidence 2345789999999999999999999997 899999999999999999999999999
Q ss_pred HHHHHHhc-------CCC-----chhHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHhhccccccCChHHH
Q psy13265 162 KAAAEVDL-------GRR-----NTLYASVAKALAADVANKCATDAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTAQI 229 (245)
Q Consensus 162 ~~~~~~~~-------~~~-----~~~~~~~~K~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~~~ 229 (245)
.++..++. +.. ....++++|.++++.+.++++.|+++|||+||..+++++|+|||+++..+++|++++
T Consensus 347 ~aa~~~~~~~~~~~~g~~~~~~~~~~~aa~aK~~at~~a~~~~~~a~q~~GG~G~~~~~~l~r~~rda~~~~~~eG~~~v 426 (661)
T 2ddh_A 347 YMKETYLRINESIGQGDLSELPELHALTAGLKAFTTWTANAGIEECRMACGGHGYSHSSGIPNIYVTFTPACTFEGENTV 426 (661)
T ss_dssp HHHHHHHC----------CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTHHHHSGGGSHHHHHHHHGGGGTSSSCHHH
T ss_pred HHHHHHHHHHHHhhcCCchhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhCcccccccCcHHHHHHhcceeeEecCchHH
Confidence 99988863 221 134688999999999999999999999999999999999999999999999999999
Q ss_pred HHHHHHHHHHHHhhc
Q psy13265 230 QRLIVSRAIIEKAKN 244 (245)
Q Consensus 230 ~~~~i~~~~l~~~~~ 244 (245)
++.++++.+|+.+++
T Consensus 427 l~~~iar~lL~~~~~ 441 (661)
T 2ddh_A 427 MMLQTARFLMKIYDQ 441 (661)
T ss_dssp HHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHH
Confidence 999999999988753
No 32
>1w07_A Acyl-COA oxidase; oxidoreductase, peroxisomal beta-oxidation, FAD cofactor; HET: FAD; 2.0A {Arabidopsis thaliana} SCOP: a.29.3.2 a.29.3.2 e.6.1.2 PDB: 2fon_A*
Probab=100.00 E-value=4.8e-42 Score=314.75 Aligned_cols=240 Identities=24% Similarity=0.307 Sum_probs=215.5
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEe--CCeEEEe-----eeeecccC-CCcccEEEE
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKK--GDEWILN-----GQKMWITN-GGVANWYFV 73 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~--~~g~~l~-----G~K~~~s~-~~~ad~~lv 73 (245)
+|+.+|+++||++|||++.+|++++|+++|||++|||+.+++|+|+++ +|||+|| |+|+|+|+ +.+||+++|
T Consensus 109 ~l~~~Gt~eqk~~~L~~i~~Ge~~~~~a~TEp~~GSd~~~l~TtA~~d~~~~g~vLntP~~~G~K~~is~~a~~Ad~~lV 188 (659)
T 1w07_A 109 AIKGQGTEEQQKKWLSLANKMQIIGCYAQTELGHGSNVQGLETTATLDPKTDEFVIHTPTQTASKWWPGGLGKVSTHAVV 188 (659)
T ss_dssp HHHHHSCHHHHHHHHHHHHTTSSCEEEECCBTTBSSCGGGCCCEEEEETTTTEEEEECCSGGGSEECCTTTTTTCSEEEE
T ss_pred HHHHcCCHHHHHHHhhHHhcCCEEEEEEecCCCCCCCcccceeEEEEcCCCCEEEEcCCCCCeEEEeecCCCCCCCEEEE
Confidence 467799999999999999999999999999999999999999999998 6899999 99999999 899999999
Q ss_pred EEEeCCCCCCCCCCCeEEEEEeC-C------CCCcccchh----------------------------------------
Q psy13265 74 LARTNPDPKCPASKAFTGFIVER-D------TPGLTPGRK---------------------------------------- 106 (245)
Q Consensus 74 ~a~~~~~~~~~~~~~~~~f~V~~-~------~~Gv~~~~~---------------------------------------- 106 (245)
+|++++++ ++.++++|+||+ + .|||++.+.
T Consensus 189 ~Ar~~~~~---~~~G~~~flVp~r~~~~~~~~pGV~v~~~~~~~G~~~~~g~~~~~v~fd~VrVP~~~lLg~~~~v~~~g 265 (659)
T 1w07_A 189 YARLITNG---KDYGIHGFIVQLRSLEDHSPLPNITVGDIGTKMGNGAYNSMDNGFLMFDHVRIPRDQMLMRLSKVTREG 265 (659)
T ss_dssp EEEEEETT---EEEEEEEEEEECBCTTTCCBCTTEEEEECCCBSSSSGGGGSCCEEEEESSEEEEGGGBCCSSEEECTTC
T ss_pred EEEECCCC---CCCCeEEEEEEccccCCCCCCCCeEEecCccCccccccCCCCceEEEeccEEECHHHhcCCcCccCCCC
Confidence 99986532 445899999995 4 689876542
Q ss_pred ----------------------hhhhhHHHHHHHHHHHHHHHHHhhhcCC-------CCcccHHHHHHHHHHHHHHHHHH
Q psy13265 107 ----------------------VAAGAVGLAQRCLDEATKYALERKAFGV-------PIAAHQAVAFMLADMAIGIEASR 157 (245)
Q Consensus 107 ----------------------~~~~~lG~~~~al~~~~~~~~~r~~~g~-------~~~~~~~~q~~lae~~~~l~~~~ 157 (245)
+++.++|+++++++.+++|++.|++||. ++.++|.+|++++++.+.+++++
T Consensus 266 ~~~~~~~~~~~~~~~l~~~R~~~aa~~~G~a~~al~~a~~ya~~R~qfg~~~~~~e~pi~~~q~vq~rLa~~~a~~~a~~ 345 (659)
T 1w07_A 266 EYVPSDVPKQLVYGTMVYVRQTIVADASNALSRAVCIATRYSAVRRQFGAHNGGIETQVIDYKTQQNRLFPLLASAYAFR 345 (659)
T ss_dssp CEEECSSCGGGCTTTTTHHHHHHHHHHHHHHHHHHHHHHHHHHHCBCSCC---CCCCBGGGSHHHHHHHHHHHHHHHHHH
T ss_pred ceecCCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccCCCCCCcccchhccHHHHHHHHHHHHHHHHHH
Confidence 2344789999999999999999999997 89999999999999999999999
Q ss_pred HHHHHHHHHHh-------cCCC-----chhHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHhhccccccCC
Q psy13265 158 LTWMKAAAEVD-------LGRR-----NTLYASVAKALAADVANKCATDAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEG 225 (245)
Q Consensus 158 al~~~~~~~~~-------~~~~-----~~~~~~~~K~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g 225 (245)
++++.++..++ .+.. ....++++|.++++.+.++++.|+++|||+||..+++++|+|||+++..+++|
T Consensus 346 ~~~~~aa~~~~~~~~~~~~g~~~~~~~~~~~~a~aK~~at~~a~~~~~~a~q~~GG~G~~~~~~l~r~~rda~~~~~~eG 425 (659)
T 1w07_A 346 FVGEWLKWLYTDVTERLAASDFATLPEAHACTAGLKSLTTTATADGIEECRKLCGGHGYLWCSGLPELFAVYVPACTYEG 425 (659)
T ss_dssp HHHHHHHHHHHHHHHHTTTTCCTTHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTGGGGGBGGGSHHHHHHHHGGGGTTTS
T ss_pred HHHHHHHHHHHHHHHhhhcCChhhhhhHHHHHHHHHHHHHHHHHHHHHHHHHHhcCcccccccCHHHHHHhcceeEEEeC
Confidence 99999888763 2222 13468999999999999999999999999999999999999999999999999
Q ss_pred hHHHHHHHHHHHHHHHhhc
Q psy13265 226 TAQIQRLIVSRAIIEKAKN 244 (245)
Q Consensus 226 ~~~~~~~~i~~~~l~~~~~ 244 (245)
++++++..+++.+|+.+++
T Consensus 426 ~~~v~~~~iar~lL~~~~~ 444 (659)
T 1w07_A 426 DNVVLQLQVARFLMKTVAQ 444 (659)
T ss_dssp CHHHHHHHHHHHHHHHHTT
T ss_pred ChHHHHHHHHHHHHHHHHH
Confidence 9999999999999998764
No 33
>3mxl_A Nitrososynthase; flavin monooxygenase, acyl-COA dehydrogenas oxidoreductase; 3.15A {Micromonospora carbonacea}
Probab=100.00 E-value=5e-41 Score=291.95 Aligned_cols=224 Identities=20% Similarity=0.248 Sum_probs=197.8
Q ss_pred hcCCHHHH---HHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 5 IAGNEAQQ---KKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 5 ~~g~~~~k---~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
.+|+++|| ++|||++.+|+.++++++|||++|+ .... ++++|||+|||+|.|+|++.+||+++|++++++++
T Consensus 106 ~~g~~~qk~~~~~~l~~~~~g~~~~~~a~tEp~~~~--~~~~---t~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~~ 180 (395)
T 3mxl_A 106 QHGTPPVRAMAERLLRAMAEGEAAVCGALKDAPGVV--TELH---SDGAGGWLLSGRKVLVSMAPIATHFFVHAQRRDDD 180 (395)
T ss_dssp HSSCHHHHHHHHHHHHHHHHTSCCEECCCSBCTTCC--CEEE---ECSSSCEEEEEEEEEETTGGGCSEECCCEEEECTT
T ss_pred hcCCHHHHhHHHHHHHHHhcCCcEEEEEecCCCCCC--CceE---EecCCEEEEeeEEEEecCccccCEEEEEEEeCCCC
Confidence 56999999 9999999999999999999998753 2222 23788999999999999999999999999987543
Q ss_pred CCCCCCCeEEEEEeCCCCCcccchh-------------------------------------------------hhhhhH
Q psy13265 82 KCPASKAFTGFIVERDTPGLTPGRK-------------------------------------------------VAAGAV 112 (245)
Q Consensus 82 ~~~~~~~~~~f~V~~~~~Gv~~~~~-------------------------------------------------~~~~~l 112 (245)
+++++++|+||++.|||++.+. +++.++
T Consensus 181 ---~~~g~~~flV~~~~pGv~v~~~~~~~G~r~~~~~~v~f~~v~Vp~~~~lg~~~~g~g~~~~~~~~~~~r~~~aa~~~ 257 (395)
T 3mxl_A 181 ---GSVFLAVPVVHRDAPGLTVLDNWDGLGMRASGTLEVVFDRCPVRADELLERGPVGARRDAVLAGQTVSSITMLGIYA 257 (395)
T ss_dssp ---SCEEEECCCEETTCTTEEEECCCCBSSCTTSCCEEEEEEEEEECGGGCCEEEESSCCCTTHHHHHHHHHGGGHHHHH
T ss_pred ---CCCceEEEEEECCCCceEeCCCchhcCCCCCCcceEEEcceEcCHHHhcCCCCCCccHHHHHhhhHHHHHHHHHHHH
Confidence 4567899999999999998764 456789
Q ss_pred HHHHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc------CCCc------hhHHHHH
Q psy13265 113 GLAQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDL------GRRN------TLYASVA 180 (245)
Q Consensus 113 G~~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~------~~~~------~~~~~~~ 180 (245)
|+++++++.+++|++ ++++.++|.+|++++++...++++++++++++..++. ..+. ...+.++
T Consensus 258 G~a~~al~~a~~~a~-----~r~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~a 332 (395)
T 3mxl_A 258 GIAQAARDIAVGFCA-----GRGGEPRAGARALVAGLDTRLYALRTTVGAALTNADAASVDLSGDPDERGRRMMTPFQYA 332 (395)
T ss_dssp HHHHHHHHHHHHHHH-----TTCSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCSCTTHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHc-----CCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcccccccCccccchhHHHHHHHH
Confidence 999999999999998 4588999999999999999999999999999988764 1111 1356789
Q ss_pred HHHHHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHhhcccc-ccCChHHHHHHHHHHHHHHH
Q psy13265 181 KALAADVANKCATDAVQVFGGNGFNSDYPVEKLMRDAKIYQ-IYEGTAQIQRLIVSRAIIEK 241 (245)
Q Consensus 181 K~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~r~~rd~~~~~-~~~g~~~~~~~~i~~~~l~~ 241 (245)
|.++++.+.++++.+++++||.||.+++|++|+|||+++.. +++|++++++..|++.+|+.
T Consensus 333 k~~~~~~a~~~~~~a~q~~Gg~g~~~~~~~~r~~Rda~~~~~~~~g~~~~~~~~ia~~~Lgl 394 (395)
T 3mxl_A 333 KMTVNELAPAVVDDCLSLVGGLAYTAGHPLSRLYRDVRAGGFMQPYSYVDAVDYLSGQALGL 394 (395)
T ss_dssp HHHHHHHHHHHHHHHHHHHCGGGGBTTSHHHHHHHHGGGGGGCSSCCHHHHHHHHHHHHSCC
T ss_pred HHHHHHHHHHHHHHHHHHhChHhccCCCcHHHHHHHHHhccccCCCCHHHHHHHHHHHHhCC
Confidence 99999999999999999999999999999999999999999 99999999999999999863
No 34
>3m9v_A FAD-dependent oxidoreductase; KIJD3, fatty acyl-COA dehydrogenase family, kijanose, kijani FAD, flavoprotein; HET: TYD; 2.05A {Actinomadura kijaniata}
Probab=100.00 E-value=2.9e-40 Score=290.89 Aligned_cols=226 Identities=21% Similarity=0.264 Sum_probs=196.7
Q ss_pred hhcCCHHH---HHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCC
Q psy13265 4 VIAGNEAQ---QKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPD 80 (245)
Q Consensus 4 ~~~g~~~~---k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~ 80 (245)
+.+|+++| |++||+++.+|+.++++++|||+++ ...+. ++++|||+|||+|+|+|++.+|||++|+++++++
T Consensus 116 ~~~gt~~q~~~k~~~l~~l~~g~~~~~~a~tEp~~~--~~~~~---t~~~~g~vlnG~K~~~s~a~~Ad~~~v~art~~~ 190 (439)
T 3m9v_A 116 WRHGDERARTLAERILRGMVAGDAVVCSGIKDHHTA--VTTLR---PDGAGGWLLSGRKTLVSMAPVGTHFVINARTDGT 190 (439)
T ss_dssp HHHSCHHHHHHHHHHHHHHHHTCCCEEEECEECTTC--CCEEE---ECSSSCEEEEEEEEEETTGGGCSEEEECEEECC-
T ss_pred HhcCCHHHHHHHHHHHHHHhCCCceEEEeecCCCCC--CCcee---eccCCEEEEEeEEEeecCccccCEEEEEEEecCC
Confidence 35799999 9999999999999999999999853 32222 2378899999999999999999999999999764
Q ss_pred CCCCCCCCeEEEEEeCCCCCcccchh-------------------------------------------------hhhhh
Q psy13265 81 PKCPASKAFTGFIVERDTPGLTPGRK-------------------------------------------------VAAGA 111 (245)
Q Consensus 81 ~~~~~~~~~~~f~V~~~~~Gv~~~~~-------------------------------------------------~~~~~ 111 (245)
+ ++.++++|+||++.|||++.+. +++.+
T Consensus 191 ~---~~~g~~~flVp~~~pGv~i~~~~~~~G~~~~~~~~v~fddv~VP~~~~lg~~~~g~g~~~~~~~~~~~r~~~aa~~ 267 (439)
T 3m9v_A 191 D---GPPRLASPVVTRDTPGFTVLDNWDGLGMRASGTVDIVFDDCPIPADHVLMRDPVGARNDAVLAGQTVSSVSVLGVY 267 (439)
T ss_dssp ----CCCCEEEEEEETTCTTEEECCCCCCSSCTTSCCEEEEEEEEEECGGGEEECCC--CCCGGGHHHHHHHHGGGHHHH
T ss_pred C---CCceeEEEEEECCCCCeEECCCcccCCcCCCCceeEEEeeeEcCHHHccCCCCCCchHHHHhhchHHHHHHHHHHH
Confidence 3 4568999999999999998765 45678
Q ss_pred HHHHHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---C---C------CchhHHHH
Q psy13265 112 VGLAQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDL---G---R------RNTLYASV 179 (245)
Q Consensus 112 lG~~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~---~---~------~~~~~~~~ 179 (245)
+|+++++++.+++|++. +++.++|.+|++|+++.+.++++++++++++..++. . . .....+.+
T Consensus 268 ~G~a~~al~~a~~~a~~-----r~i~~~~~vq~~la~~~~~~~aar~l~~~aa~~~d~~~~~~~~~~~~~~~~~~~~~~~ 342 (439)
T 3m9v_A 268 VGVAQAAYDTAVAALER-----RPEPPQAAALTLVAEIDSRLYALRATAGSALTAADALSADLSGDMDERGRQMMRHFQC 342 (439)
T ss_dssp HHHHHHHHHHHHHHHHT-----CSSCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCSSCHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHcC-----CCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccccccchhhhhHHHHHHH
Confidence 99999999999999984 478999999999999999999999999988877653 1 0 11234678
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHhhcccc-ccCChHHHHHHHHHHHHHHHh
Q psy13265 180 AKALAADVANKCATDAVQVFGGNGFNSDYPVEKLMRDAKIYQ-IYEGTAQIQRLIVSRAIIEKA 242 (245)
Q Consensus 180 ~K~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~r~~rd~~~~~-~~~g~~~~~~~~i~~~~l~~~ 242 (245)
+|.++++.+.++++.+++++||.||.+++|++|+|||+++.. +|+|++++.+..+++.+|++.
T Consensus 343 ak~~a~~~a~~v~~~a~q~~Gg~G~~~~~~l~r~~Rda~~~~~~~~gt~~~~~~~i~~~~lg~~ 406 (439)
T 3m9v_A 343 AKLAVNRLAPEIVSDCLSLVGGASYTAGHPLARLLRDVQAGRFMQPYAYVDAVDFLSAQALGIE 406 (439)
T ss_dssp HHHHHHHHHHHHHHHHHHHHCGGGGSTTSHHHHHHHHTTGGGTSSSCCHHHHHHHHHHHHTTC-
T ss_pred HHHHHHHHHHHHHHHHHHHhCHHHhcCCChHHHHHHHHHhhhhhCCCchHHHHHHHHHHHhCCc
Confidence 899999999999999999999999999999999999999999 999999999999999998754
No 35
>2rfq_A 3-HSA hydroxylase, oxygenase; rhodococcus SP. RHA1, structural genomics protein structure initiative, midwest center for structural genomics, MCSG; HET: 1PS; 1.65A {Rhodococcus SP} PDB: 3aff_A 3afe_A
Probab=100.00 E-value=7.3e-39 Score=278.28 Aligned_cols=223 Identities=15% Similarity=0.185 Sum_probs=197.8
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
+|..+|+++||++|++ +|+.+++++++ | .+++++++|||+|||+|.|+|++.+||+++|++++++++
T Consensus 95 ~l~~~g~~~q~~~~l~---~g~~~~~~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~g 161 (394)
T 2rfq_A 95 HLALFSQQAQEDVWGN---DTDVRISSSYA-P---------MGAGQVVDGGYTVNGAWAWSSGCDHASWAVLGGPVIKDG 161 (394)
T ss_dssp HHTTSCHHHHHHHHSS---CTTCCEEEECS-C---------SEEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEEEETT
T ss_pred HHHhCCHHHHHHHhCC---CCCeEEEeccC-C---------CceEEEeCCeEEEeeeEeccCCCcccceEEEeeeecCCC
Confidence 4567999999999999 68899999987 3 588999999999999999999999999999999984321
Q ss_pred CCCCCCCeEEEEEeCCCCCcccchh-------------------------------------------------------
Q psy13265 82 KCPASKAFTGFIVERDTPGLTPGRK------------------------------------------------------- 106 (245)
Q Consensus 82 ~~~~~~~~~~f~V~~~~~Gv~~~~~------------------------------------------------------- 106 (245)
.++++++|+||++ ||++.+.
T Consensus 162 ---~~~~~~~flV~~~--gv~v~~~~~~~G~~~~~~~~v~fd~v~Vp~~~~lg~~~~~~g~~~g~~~~~g~~~~~~~~~~ 236 (394)
T 2rfq_A 162 ---RPVDFVSFLIPRE--DYRIDDVWNVVGLRGTGSNTVVVEDVFVPTHRVLSFKAMSNLTAPGLERNTAPVYKMPWGTI 236 (394)
T ss_dssp ---EEEEEEEEEEEGG--GCEEECCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHTTCCGGGTTCCCGGGGSCHHHH
T ss_pred ---CCCceeEEEEEhh--hcEEeCCccccccccCCCCceEEcceEcChHHhcccccccccCCCCcccCCCccccccHHHH
Confidence 2347899999986 5655442
Q ss_pred ----hhhhhHHHHHHHHHHHHHHHHHhh---hcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCc--
Q psy13265 107 ----VAAGAVGLAQRCLDEATKYALERK---AFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVD----LGRRN-- 173 (245)
Q Consensus 107 ----~~~~~lG~~~~al~~~~~~~~~r~---~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~----~~~~~-- 173 (245)
+++.++|+++++++.+++|++.|+ +||+++.++|.+|++++++...++++++++++++..++ .+.+.
T Consensus 237 ~r~~~aa~~~G~a~~al~~a~~ya~~R~~~~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~~~~~~~g~~~~~ 316 (394)
T 2rfq_A 237 HPTTISAPIVGMAYGAYDAHVEHQGKRVRAAFAGEKAKDDPFAKVRIAEASSDIDAAWRQLSGNVADEYALLVAGEEVPF 316 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHSCTTCGGGSCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHhccCCcCCCCCcccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCH
Confidence 234578999999999999999999 99999999999999999999999999999999999998 55442
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHhhccccccCC-hHHHHHHHHHHHHHHHh
Q psy13265 174 --TLYASVAKALAADVANKCATDAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEG-TAQIQRLIVSRAIIEKA 242 (245)
Q Consensus 174 --~~~~~~~K~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g-~~~~~~~~i~~~~l~~~ 242 (245)
...+.++|.++++.+.++++.+++++||.||.+++|++|+|||+++..+++| ++++++..|++.+|+..
T Consensus 317 ~~~~~~~~aK~~a~~~a~~~~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~g~~~~~~~~~i~~~llg~~ 388 (394)
T 2rfq_A 317 ELRLRARRDQVRATGRAISSIDKLFESSGATALANGTPLQRFWRDAHAGRVHAANDPERAYVMYGTGEFGLP 388 (394)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGGBTTCHHHHHHHHHHHHTTSGGGCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhChhhhhcCCcHHHHHHHHHHHHcccccCchhHHHHHHHHHhCCC
Confidence 2368899999999999999999999999999999999999999999999999 99999999999998754
No 36
>2or0_A Hydroxylase; APC7385, rhodococcus SP. RHA1, structu genomics, PSI-2, protein structure initiative, midwest CENT structural genomics, MCSG; HET: MSE; 2.10A {Rhodococcus SP}
Probab=100.00 E-value=8.6e-39 Score=279.55 Aligned_cols=223 Identities=17% Similarity=0.179 Sum_probs=197.2
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
+|..+|+++||++|+| +|+.++++++| | .+++++++|||+|||+|.|+|++.+||+++|++++++++
T Consensus 108 ~l~~~g~~~q~~~~l~---~g~~~~a~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~~ 174 (414)
T 2or0_A 108 ELAFADPQVQEEIWGE---DNDTWMASPYA-P---------MGVATPVDGGYVLKGRWSFSSGTDHCQWAFLGAMVGDGE 174 (414)
T ss_dssp HHTTSCHHHHHHHHSS---CTTCCEECCCS-C---------CEEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEECC--
T ss_pred HHHhCCHHHHHHHHcc---CCCeEEEeccC-C---------CceeEEECCeEEEEeeEeccCCCchhhEEEEEEEecCCC
Confidence 4567999999999999 69999999988 4 588999999999999999999999999999999987432
Q ss_pred CCCCCC---CeEEEEEeCCCCCcccc-hh---------------------------------------------------
Q psy13265 82 KCPASK---AFTGFIVERDTPGLTPG-RK--------------------------------------------------- 106 (245)
Q Consensus 82 ~~~~~~---~~~~f~V~~~~~Gv~~~-~~--------------------------------------------------- 106 (245)
+++ ++++|+||++ ||++. +.
T Consensus 175 ---g~~~~~g~~~flV~~~--gv~v~~~~~~~~G~r~~~~~~v~fd~v~VP~~~~lg~~~~~~g~~~g~~~~~g~~~~~~ 249 (414)
T 2or0_A 175 ---GGIATPSSLHVILPRT--DYQIVEDTWDVIGLRGTGSKDLIVDGAFVPGYRTLNAAKVMDGRAQKEAGRPEPLFNMP 249 (414)
T ss_dssp ------CCCSEEEEEEEGG--GCEEETTCCCBSSCGGGCCEEEEEEEEEEEGGGEEEHHHHHHSHHHHHHTCSCSGGGSC
T ss_pred ---CCcccceeEEEEEEhh--hcEEecCCCccccCcccCCCcEEEccEEecHHHeeccccccccCCCccccCCCcccccc
Confidence 223 8899999986 67766 43
Q ss_pred --------hhhhhHHHHHHHHHHHHHHHHHhhhc-CCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCc
Q psy13265 107 --------VAAGAVGLAQRCLDEATKYALERKAF-GVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVD----LGRRN 173 (245)
Q Consensus 107 --------~~~~~lG~~~~al~~~~~~~~~r~~~-g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~----~~~~~ 173 (245)
+++.++|+++++++.+++|++.|++| |+|+.++|.+|++|+++.+.++++++++++++..++ .+...
T Consensus 250 ~~~~~r~~~aa~~lG~a~~al~~a~~ya~~R~~f~G~~i~~~q~vq~~la~~~~~~~aar~l~~~aa~~~~~~~~~g~~~ 329 (414)
T 2or0_A 250 YSCMFPLGITAAVIGITEGALACHIAVQKDRVAITGQKIKEDPYVLSAIGESAAEINASRVSLIETADRFYDKVDAGKEI 329 (414)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCBCTTSCBGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCC
Confidence 12346899999999999999999999 999999999999999999999999999999999988 55442
Q ss_pred ----hhHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHhhccccccCC-hHHHHHHHHHHHHHHHh
Q psy13265 174 ----TLYASVAKALAADVANKCATDAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEG-TAQIQRLIVSRAIIEKA 242 (245)
Q Consensus 174 ----~~~~~~~K~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g-~~~~~~~~i~~~~l~~~ 242 (245)
...+.++|.++++.+.++++.+++++||.||.+++|++|+|||+++..+++| ++++++..|++.+|+..
T Consensus 330 ~~~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~t~~~~~~~ia~~~lg~~ 403 (414)
T 2or0_A 330 TFEERAIGRRTQIAAAWRAVRAADEIFARAGGGALHYKTPMQRFWRDAHAGLAHAVHVPGPTNHASALTQLGGE 403 (414)
T ss_dssp CHHHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGGBTTSSHHHHHHHHHHHHTSGGGCCHHHHHHHHHHHTTCC
T ss_pred CHHHHHHHHHHHHHHHHHHHHHHHHHHHhhChHhhccCCchhHHHHHHHHHHcCCcccchHHHHHHHHHHhCCC
Confidence 2368899999999999999999999999999999999999999999999999 99999999999998653
No 37
>2jbr_A P-hydroxyphenylacetate hydroxylase C2 oxygenase C; flavoenzyme hydroxylase, oxidoreductase; 2.3A {Acinetobacter baumannii} PDB: 2jbs_A* 2jbt_A*
Probab=100.00 E-value=2.1e-38 Score=277.75 Aligned_cols=223 Identities=16% Similarity=0.193 Sum_probs=198.4
Q ss_pred hhhhcCCHHHHHHHhhhhhcCCceeEEEecCCCCCCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCC
Q psy13265 2 PVVIAGNEAQQKKYLGRLVEEPIVAAYCVTEPGAGSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPDP 81 (245)
Q Consensus 2 ~l~~~g~~~~k~~~l~~~~~g~~~~~~~~tE~~~gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~ 81 (245)
+|..+|+++||++|+++ |+.++++++| | .+++++++|||+|||+|.|+|++.+||+++|++++++++
T Consensus 123 ~l~~~g~~~q~~~~l~~---g~~~~a~a~t-p---------~t~A~~~~~g~~lnG~K~~is~a~~Ad~~~v~a~~~~~~ 189 (422)
T 2jbr_A 123 QIAMFSKQLQDEIWLKD---PDATASSSIA-P---------FGKVEEVEGGIILNGDYGWSSGCDHAEYAIVGFNRFDAD 189 (422)
T ss_dssp HHTTSCHHHHHHHHTTC---TTCCEEEECS-C---------CSEEEEETTEEEEEEEEEEETTGGGCSEEEEEEEEECTT
T ss_pred HHHhCCHHHHHHHHccC---CCeEEEeecC-C---------CeeEEEeCCEEEEeeeEeeecCCccccEEEEEEEecCCC
Confidence 45679999999999997 8889999988 3 578999999999999999999999999999999986432
Q ss_pred CCCCCCCeEEEEEeCCCCCcccchh-------------------------------------------------------
Q psy13265 82 KCPASKAFTGFIVERDTPGLTPGRK------------------------------------------------------- 106 (245)
Q Consensus 82 ~~~~~~~~~~f~V~~~~~Gv~~~~~------------------------------------------------------- 106 (245)
+++++++|+||++ ||++.+.
T Consensus 190 ---g~~g~~~flV~~~--gv~v~~~~~~~G~r~~~~~~v~fddv~VP~~~~lg~~~~~~g~~~g~g~~~~~~~~~~~~~~ 264 (422)
T 2jbr_A 190 ---GNKIYSFGVIPRS--DYEIVDNWYAQAIKSSGSKMLKLVNVFIPEYRISKAKDMMEGKSAGFGLYPDSKIFYTPYRP 264 (422)
T ss_dssp ---SCEEEEEEEEEGG--GCEEECCCCBSSSGGGCCEEEEEEEEEEEGGGEEEHHHHHHTCSTTTTSCTTCSSSSSCHHH
T ss_pred ---CCceeEEEEEEcC--ceEEeCCccccCcCCCCCCcEEEeeEEecHHHeecccccccCCCCcccccCCCcccccchHH
Confidence 3458899999986 5655442
Q ss_pred -----hhhhhHHHHHHHHHHHHHHHHHhh--hcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHh----cCCCc--
Q psy13265 107 -----VAAGAVGLAQRCLDEATKYALERK--AFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVD----LGRRN-- 173 (245)
Q Consensus 107 -----~~~~~lG~~~~al~~~~~~~~~r~--~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~----~~~~~-- 173 (245)
+++.++|+++++++.+++|++.|+ +||+++.++|.+|++++++.++++++++++++++..++ .+.+.
T Consensus 265 ~~r~~~aa~~lG~a~~al~~a~~ya~~R~~~~fG~~i~~~q~vq~~la~~~~~~~aar~~~~~aa~~~d~~~~~g~~~~~ 344 (422)
T 2jbr_A 265 YFASGFSAVSLGIAERMIEAFKEKQRNRVRAYTGANVGLATPALMRIAESTHQVAAARALLEKTWEDHRIHGLNHQYPNK 344 (422)
T ss_dssp HHTTHHHHHHHHHHHHHHHHHHHHHTTCBCTTTCCBCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTTCCCCH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCCCCccccCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCCCH
Confidence 234478999999999999999998 99999999999999999999999999999999999988 55442
Q ss_pred --hhHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHhhccccccCChH-HHHHHHHHHHHHHHh
Q psy13265 174 --TLYASVAKALAADVANKCATDAVQVFGGNGFNSDYPVEKLMRDAKIYQIYEGTA-QIQRLIVSRAIIEKA 242 (245)
Q Consensus 174 --~~~~~~~K~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~r~~rd~~~~~~~~g~~-~~~~~~i~~~~l~~~ 242 (245)
...++++|.++++.+.++++.+++++||.||.+++|++|+|||+++..+++|++ ++++..|++.+|+..
T Consensus 345 ~~~~~~~~aK~~a~e~a~~v~~~a~q~~Gg~g~~~~~~l~r~~Rda~~~~~~~G~~~e~~~~~ia~~~lg~~ 416 (422)
T 2jbr_A 345 ETLAFWRTNQAYAVKMCIEAVDRLMAAAGATSFMDNSELQRLFRDAHMTGAHAYTDYDVCAQILGRELMGME 416 (422)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHTTSCGGGGBTTCHHHHHHHHHHHHTSSTTTCHHHHHHHHHHHHTTCC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHHHhCHHhhhcCCcHHHHHHHHHHHhcCCccchhHHHHHHHHHHhCCC
Confidence 236899999999999999999999999999999999999999999999999999 999999999998754
No 38
>2yyk_A 4-hydroxyphenylacetate-3-hydroxylase; structurome, riken spring-8 center, oxygnase component, 4- hydroxyphenylacetate 3-monooxygenase; 1.60A {Thermus thermophilus} PDB: 2yyl_A* 2yym_A* 2yyi_A* 2yyg_A* 2yyj_A*
Probab=100.00 E-value=3.7e-33 Score=247.12 Aligned_cols=219 Identities=17% Similarity=0.152 Sum_probs=173.3
Q ss_pred CHHHHHHHhhhhhcCCceeEEEecCCCCC--------CCCCCceeEEE-EeCCeEEEeeeeecccCCCcccEEEEEEEeC
Q psy13265 8 NEAQQKKYLGRLVEEPIVAAYCVTEPGAG--------SDVNGVKTKAV-KKGDEWILNGQKMWITNGGVANWYFVLARTN 78 (245)
Q Consensus 8 ~~~~k~~~l~~~~~g~~~~~~~~tE~~~g--------sd~~~~~~~a~-~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~ 78 (245)
.++||++|||++++|++++++++|||+.| ||+. ..++++ +++|||+|||+|+|+|+ +.||+++|+++++
T Consensus 122 ~~eqk~~~L~~l~~Ge~~~a~a~TEP~~grs~~~s~gsd~~-~~~~~~~~~gdg~VlnG~K~~iT~-~~Ad~~iV~art~ 199 (481)
T 2yyk_A 122 FAENVRNYYRYLRDQDLATTHALTNPQVNRARPPSGQPDPY-IPVGVVKQTEKGIVVRGARMTATF-PLADEVLIFPSIL 199 (481)
T ss_dssp GHHHHHHHHHHHHHHTCCEEEEECCCCCCTTC----CCCSC-SBCEEEEECSSEEEEEEEEEEEEC-CCSSEEEECCCSC
T ss_pred HHHHHHHHHHHHHcCCeEEEEeeECCCCCCCCCccccCCcc-cceEEEEEECCEEEEEeEEEEecc-ccccEEEEEEecC
Confidence 47999999999999999999999999876 5553 456664 78899999999999999 9999999999986
Q ss_pred CCCCCCCCCCeEEEEEeCCCCCcccc--h------------------h-----------------h--------------
Q psy13265 79 PDPKCPASKAFTGFIVERDTPGLTPG--R------------------K-----------------V-------------- 107 (245)
Q Consensus 79 ~~~~~~~~~~~~~f~V~~~~~Gv~~~--~------------------~-----------------~-------------- 107 (245)
++++ .+.++++|+||++.|||++. + . +
T Consensus 200 ~~~~--~~~~~s~flVp~dtpGv~v~~r~~~~~~~s~~d~~lg~r~~~~~~~v~FddV~VP~e~vl~~G~~~~g~~~~~~ 277 (481)
T 2yyk_A 200 LQAG--SEKYALAFALPTSTPGLHFVCREALVGGDSPFDHPLSSRVEEMDCLVIFDDVLVPWERVFILGNVELCNNAYGA 277 (481)
T ss_dssp CCTT--CGGGCEEEEEETTCTTEEEEECCCCCCCSCTTTCTTTTTCCCCEEEEEEEEEEEEGGGEEEESCHHHHHHHHHH
T ss_pred CCCC--CCCeEEEEEEECCCCCEEEEeccccccCCccccccccccCCCCeEEEEEccEEECHHHccCCCCccHHHHHHHH
Confidence 4321 23468999999999999882 1 1 1
Q ss_pred -----------hhhhHHHHHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CC--
Q psy13265 108 -----------AAGAVGLAQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDL---GR-- 171 (245)
Q Consensus 108 -----------~~~~lG~~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~---~~-- 171 (245)
++..+|.++.++..+..++.. + +++++|.+|++|++|.+.++++|+++++++..++. +.
T Consensus 278 ~~~l~~~r~~~~~~~~g~a~~~lg~a~~~~~~---~--gi~~~q~vq~~laem~~~leaar~l~~~aa~~~d~~~~G~~~ 352 (481)
T 2yyk_A 278 TGALNHMAHQVVALKTAKTEAFLGVAALMAEG---I--GADVYGHVQEKIAEIIVYLEAMRAFWTRAEEEAKENAYGLLV 352 (481)
T ss_dssp HTHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---T--TGGGSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTSCEE
T ss_pred hhcchhHHHHHHHHHHHHHHHHHHHHHHHHHh---c--ChhhhHHHHHHHHHHHHHHHHHHHHHHHHHHcccccccCCcC
Confidence 122335555566666555543 3 38999999999999999999999999999998863 32
Q ss_pred CchhHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCChHHHHHHhhcccc------ccCChHHHHHHHHHHHH
Q psy13265 172 RNTLYASVAKALAADVANKCATDAVQVFGGNGFNSDYPVEKLMRDAKIYQ------IYEGTAQIQRLIVSRAI 238 (245)
Q Consensus 172 ~~~~~~~~~K~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~r~~rd~~~~~------~~~g~~~~~~~~i~~~~ 238 (245)
+....++++|.++++.+.++++.+++++||.++. .|+++.| |..... ...|++++.+..|+|.+
T Consensus 353 ~~~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~--~p~e~~~-~~~i~~~l~~~l~~~g~~~~~r~~i~rl~ 422 (481)
T 2yyk_A 353 PDRGALDGARNLYPRLYPRIREILEQIGASGLIT--LPSEKDF-KGPLGPFLEKFLQGAALEAKERVALFRLA 422 (481)
T ss_dssp CCHHHHHHHHHHHHHHHHHHHHHHHHHHGGGGSC--CCCHHHH-HSTTHHHHHHHSCBTTBCHHHHHHHHHHH
T ss_pred ccHHHHHHHHHHHHHHHHHHHHHHHHHhCccccc--CccHHHh-ChhhhHHHHHHHhcCCCCHHHHHHHHHHH
Confidence 3345799999999999999999999999997776 7888888 773322 22388888888888654
No 39
>1u8v_A Gamma-aminobutyrate metabolism dehydratase/isomerase; ALFA-helixes, beta-strands, lyase; HET: FAD; 1.60A {Clostridium aminobutyricum} SCOP: a.29.3.1 e.6.1.1
Probab=100.00 E-value=2.3e-33 Score=248.87 Aligned_cols=227 Identities=16% Similarity=0.089 Sum_probs=175.8
Q ss_pred hcCC--HHHHHHHhhhhhcCCceeEEEecCCCCC--------CCC-CCceeEEEEeCCeEEEeeeeecccCCCcccEEEE
Q psy13265 5 IAGN--EAQQKKYLGRLVEEPIVAAYCVTEPGAG--------SDV-NGVKTKAVKKGDEWILNGQKMWITNGGVANWYFV 73 (245)
Q Consensus 5 ~~g~--~~~k~~~l~~~~~g~~~~~~~~tE~~~g--------sd~-~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv 73 (245)
.||+ ++||++|||++++|++++++++|||+.| ||+ .... ++++++|||+|||+|+|+|++..||+++|
T Consensus 122 ~~Gt~~~eqk~~~L~~l~~Ge~~~a~a~TEP~~~rs~~~~~gSD~~~~~~-~a~r~gdg~vlnG~K~~iT~a~~Ad~~iV 200 (490)
T 1u8v_A 122 KYGTNYHKNFTEYLKYIQENDLIVDGAMTDPKGDRGLAPSAQKDPDLFLR-IVEKREDGIVVRGAKAHQTGSINSHEHII 200 (490)
T ss_dssp HHCCCHHHHHHHHHHHHHHHTCCEEEECCCCCSCTTSCGGGCSSTTSSCE-EEEECSSEEEEEEEECSCTTCTTCSEEEE
T ss_pred HhCCCHHHHHHHHHHHHHhCCceeeeeeeCCCCCCcccccccCCcccceE-EEEEECCEEEEEeEEEEeeCCcccCEEEE
Confidence 6999 9999999999999999999999999864 664 3334 78899999999999999999999999999
Q ss_pred EEEeCCCCCCCCCCCeEEEEEeCCCCCcccch---------------------h--------------------------
Q psy13265 74 LARTNPDPKCPASKAFTGFIVERDTPGLTPGR---------------------K-------------------------- 106 (245)
Q Consensus 74 ~a~~~~~~~~~~~~~~~~f~V~~~~~Gv~~~~---------------------~-------------------------- 106 (245)
+++++.+++ ...+.++|+||++.|||++.+ .
T Consensus 201 ~art~~~~~--~~~~~s~flVp~d~pGv~v~~~r~~~~~~~~~~~~d~~lg~~r~~~~~~~v~FddV~VP~e~vl~~g~~ 278 (490)
T 1u8v_A 201 MPTIAMTEA--DKDYAVSFACPSDADGLFMIYGRQSCDTRKMEEGADIDLGNKQFGGQEALVVFDNVFIPNDRIFLCQEY 278 (490)
T ss_dssp CCSSCCCGG--GGGGCEEEEEETTCTTEEEEECCCTTGGGGGSTTCCGGGSSSSCCCCCEEEEEEEEEEEGGGEEEESCG
T ss_pred EEecCCCCC--CCCeEEEEEEECCCCCEEEEecccccccccccccccCCccccccCCceEEEEECceEeCHHHccCCCCh
Confidence 999863211 224588999999999998831 1
Q ss_pred -----------------hhhhhHHHHHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc
Q psy13265 107 -----------------VAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDL 169 (245)
Q Consensus 107 -----------------~~~~~lG~~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~ 169 (245)
++++++|.++.++..+...+. .+ ++.++|.+|++|++|.+.++++++++++++..++.
T Consensus 279 ~~g~~~~~~~~~~~r~~~~a~~~~~~~~~lG~a~~~~~---~~--gi~~~q~vq~~laem~~~leaar~l~~~aa~~~d~ 353 (490)
T 1u8v_A 279 DFAGMMVERFAGYHRQSYGGCKVGVGDVVIGAAALAAD---YN--GAQKASHVKDKLIEMTHLNETLYCCGIACSAEGYP 353 (490)
T ss_dssp GGHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---HH--TCTTCHHHHHHHHHHHHHHHHHHHHHHHHHHTCEE
T ss_pred hHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH---hc--CchhcHHHHHHHHHHHHHHHHHHHHHHHHHHcccc
Confidence 111122333333333333222 23 38899999999999999999999999999998864
Q ss_pred ---CC--CchhHHHHHHHHHHHHHHHHHHHHHHhhCCCCCC-------CCC--------hHHHHHHhhccccccCChHHH
Q psy13265 170 ---GR--RNTLYASVAKALAADVANKCATDAVQVFGGNGFN-------SDY--------PVEKLMRDAKIYQIYEGTAQI 229 (245)
Q Consensus 170 ---~~--~~~~~~~~~K~~~~~~~~~~~~~~~~~~G~~~~~-------~~~--------~l~r~~rd~~~~~~~~g~~~~ 229 (245)
+. +....++++|.++++.+.++++.+++++||.++. ++. ++++++|+......+.++.+.
T Consensus 354 ~~~g~~~~~~~~~s~aK~~a~e~a~~v~~~a~qi~Gg~g~~~p~er~~rd~~~~~~~~~~~~~~l~~~~~g~~~~~~~dr 433 (490)
T 1u8v_A 354 TAAGNYQIDLLLANVCKQNITRFPYEIVRLAEDIAGGLMVTMPSEADFKSETVVGRDGETIGDFCNKFFAAAPTCTTEER 433 (490)
T ss_dssp CTTSCEECCHHHHHHHHHHHTTHHHHHHHHHHHHHCTHHHHCCCHHHHTCCCBCSTTSCBHHHHHHHHTCCSTTSCHHHH
T ss_pred cccCCcCccHHHHHHHHHHHHHHHHHHHHHHHHHhCcchhcChHHHHHhCchhccccchhHHHHHHHHhCCCCCCCHHHH
Confidence 22 3345789999999999999999999999999987 333 377777777777777777776
Q ss_pred HHHH-HHHHHH
Q psy13265 230 QRLI-VSRAII 239 (245)
Q Consensus 230 ~~~~-i~~~~l 239 (245)
++.. +++.+.
T Consensus 434 ~~~~rl~~~~~ 444 (490)
T 1u8v_A 434 MRVLRFLENIC 444 (490)
T ss_dssp HHHHHHHHHHH
T ss_pred HHHHHHHHHHh
Confidence 6665 666654
No 40
>3hwc_A Chlorophenol-4-monooxygenase component 2; beta barrel, helix bundle, oxidoreductase; 2.50A {Burkholderia cepacia}
Probab=99.96 E-value=2.2e-27 Score=210.43 Aligned_cols=188 Identities=16% Similarity=0.115 Sum_probs=148.2
Q ss_pred HHHHHHHhhhhhcCCceeEEEecCCCC--------CCCCCCceeEEEEeCCeEEEeeeeecccCCCcccEEEEEEEeCCC
Q psy13265 9 EAQQKKYLGRLVEEPIVAAYCVTEPGA--------GSDVNGVKTKAVKKGDEWILNGQKMWITNGGVANWYFVLARTNPD 80 (245)
Q Consensus 9 ~~~k~~~l~~~~~g~~~~~~~~tE~~~--------gsd~~~~~~~a~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~ 80 (245)
.+||++|||++++|++++++++|||+. |||+ ...+ +++++|||+|||+|.|+|++..||+++|++++++.
T Consensus 132 ~eq~~~~L~~l~~Ge~~~a~AltEP~~~rs~~~~~GSD~-~~~~-~~~~gdg~VlnG~K~~iT~a~~Ad~~lV~a~t~~~ 209 (515)
T 3hwc_A 132 TQNIHNFLKLLREKDLNCPLNFVDPQTDRSSDAAQARSP-NLRI-VEKTDDGIIVNGVKAVGTGIAFGDYMHIGCLYRPG 209 (515)
T ss_dssp HHHHHHHHHHHHHTTCCCCEECCCCCCCCCSCTTTSCCS-BCEE-EEECSSEEEEEEEEEEEESGGGCSEEEECCCCCTT
T ss_pred HHHHHHHHHHHHcCCcEEEEEeeCCCCCcccccccCCCc-ceEE-EEEECCEEEEEEEEEEECCccccCEEEEEEEecCC
Confidence 588999999999999999999999986 4676 4333 34568899999999999999999999999987332
Q ss_pred CCCCCCCCeEEEEEeCCCCCcccch---------------------h---------------h-------hh--------
Q psy13265 81 PKCPASKAFTGFIVERDTPGLTPGR---------------------K---------------V-------AA-------- 109 (245)
Q Consensus 81 ~~~~~~~~~~~f~V~~~~~Gv~~~~---------------------~---------------~-------~~-------- 109 (245)
. +++. +++|+||++.|||++.+ . + +.
T Consensus 210 ~--~~~~-~s~FlVp~d~pGv~v~~~~~~~G~~~~d~~ls~~~~~~~a~v~FddV~VP~e~vl~~Ge~g~g~~~~~~~~~ 286 (515)
T 3hwc_A 210 I--PGEQ-VIFAAIPTNTPGVTVFCRESTVKNDPAEHPLASQGDELDSTTVFDNVFIPWEQVFHIGNPEHAKLYPQRIFD 286 (515)
T ss_dssp C--CGGG-CEEEEEETTCTTEEEEECCCCCCSCTTTCTTTTSCCCCEEEEEEEEEEEEGGGEEEESCTTGGGTHHHHHHH
T ss_pred C--CCCe-EEEEEEECCCCCeEEeecccccCccccccccccccCCceEEEEECceEECHHHccCCCCccHHHHHHHHHHH
Confidence 1 1223 89999999999998731 1 1 10
Q ss_pred --------hhHHHHHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---CC--CchhH
Q psy13265 110 --------GAVGLAQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDL---GR--RNTLY 176 (245)
Q Consensus 110 --------~~lG~~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~---~~--~~~~~ 176 (245)
..+|.+..++..+...+. .+ ++.++|.+|++|+||.+.++++++++++++...+. +. +....
T Consensus 287 ~~~r~~~~~~~~~a~~~lG~A~~~~e---~~--gI~~fQ~Vq~kLAem~~~lEaaR~l~~~Aa~~~d~~~~G~~~p~~~~ 361 (515)
T 3hwc_A 287 WVHYHILIRQVLRAELIVGLAILITE---HI--GTSKLPTVSARVAKLVAFHLAMQAHLIASEETGFHTKGGRYKPNPLI 361 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHHH---HH--TCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTCCEECCHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHHH---Hc--CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhhccccCCCCCCCHHH
Confidence 112344444444444433 23 38899999999999999999999999999998764 22 34567
Q ss_pred HHHHHHHHHHHHHHHHHHHHHhhCCCCCCC
Q psy13265 177 ASVAKALAADVANKCATDAVQVFGGNGFNS 206 (245)
Q Consensus 177 ~~~~K~~~~~~~~~~~~~~~~~~G~~~~~~ 206 (245)
++++|.++++.+.++++.+++++||.++..
T Consensus 362 as~AK~~ase~~~rv~~~a~qi~GG~~i~~ 391 (515)
T 3hwc_A 362 YDFGRAHFLQNQMSVMYELLDLAGRSSLMI 391 (515)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHGGGGTSC
T ss_pred HHHHHHHHHHHHHHHHHHHHHHcCCCeeeC
Confidence 999999999999999999999999999874
No 41
>4g5e_A 2,4,6-trichlorophenol 4-monooxygenase; oxidoreductase; 2.50A {Cupriavidus necator JMP134}
Probab=99.90 E-value=1e-22 Score=180.78 Aligned_cols=188 Identities=14% Similarity=0.046 Sum_probs=147.6
Q ss_pred HHHHHHhhhhhcCCceeEEEecCCCCCCC-----CCCceeEE-EEeCCeEEEeeeeecccCCCcccEEEEEEEeCCCCCC
Q psy13265 10 AQQKKYLGRLVEEPIVAAYCVTEPGAGSD-----VNGVKTKA-VKKGDEWILNGQKMWITNGGVANWYFVLARTNPDPKC 83 (245)
Q Consensus 10 ~~k~~~l~~~~~g~~~~~~~~tE~~~gsd-----~~~~~~~a-~~~~~g~~l~G~K~~~s~~~~ad~~lv~a~~~~~~~~ 83 (245)
+-..+|++.+.++++..+.++++|...-. ..++-..+ ++.++||+|||.|.|+|+++.||+++|++++++..
T Consensus 134 ~n~~~y~~~~~~~DL~~~~a~~dPk~dRs~~~~~q~d~~l~Vve~~~dGiVVnGaK~~~T~a~~Ad~i~V~a~t~~~~-- 211 (517)
T 4g5e_A 134 KNIVDFVNFAKKHDLNCAPQFVDPQMDRSNPDAQQRSPGLRVIEKNDKGIVVSGVKAIGTGVAFADWIHIGVFFRPGI-- 211 (517)
T ss_dssp HHHHHHHHHHHHHTCCEEEECCCCCC-----------CBCEEEEECSSEEEEEEEEEEEESGGGCSEEEECCCCCTTC--
T ss_pred HHHHHHHHHHHhcCceeeeeeeCCCCCCCCCchhcCCCceEEEEEcCCeEEEeeEehhhcCccccCEEEEEeecCCCC--
Confidence 55678999999999999999999963211 11222344 45678999999999999999999999999887553
Q ss_pred CCCCCeEEEEEeCCCCCcccchh---------------------------------------------------------
Q psy13265 84 PASKAFTGFIVERDTPGLTPGRK--------------------------------------------------------- 106 (245)
Q Consensus 84 ~~~~~~~~f~V~~~~~Gv~~~~~--------------------------------------------------------- 106 (245)
+.++.+.|+||+++|||++...
T Consensus 212 -~~d~~~~F~VP~dtPGv~~i~r~~~~~~~~~d~pl~~r~~e~da~vvFDdV~VP~e~Vf~~Ge~~~~~~~~~~~~~~~~ 290 (517)
T 4g5e_A 212 -PGDQIIFAATPVNTPGVTIVCRESVVKEDPIEHPLASQGDELDGMTVFDNVFIPWSHVFHLGNPEHAKLYPQRVFDWLH 290 (517)
T ss_dssp -CGGGCEEEEEETTCTTEEEEECCCCCCSCTTTCTTGGGCCCCEEEEEEEEEEEEGGGEEEESCTTHHHHHHHHHHHHHH
T ss_pred -CccceEEEEEecCCCCeEEEecccccCCCccccccccccCCcceEEEecceeccHHHccccCChhHHHHHHHHHHHHHH
Confidence 4466889999999999987321
Q ss_pred --hhhhhHHHHHHHHHHHHHHHHHhhhcCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc---C--CCchhHHHH
Q psy13265 107 --VAAGAVGLAQRCLDEATKYALERKAFGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDL---G--RRNTLYASV 179 (245)
Q Consensus 107 --~~~~~lG~~~~al~~~~~~~~~r~~~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~---~--~~~~~~~~~ 179 (245)
.++..+|.++.++..+..+++.. .+.++|+||+.|+||...+++++++++++...... + .++...+++
T Consensus 291 ~~~~~~~~~~~~~~~g~a~~~ae~~-----Gi~~fq~Vq~kLaEm~~~~E~~ral~~aaa~~a~~~~~G~~~P~~~~a~~ 365 (517)
T 4g5e_A 291 YHALIRQSVRAELMAGLAILITEHI-----GTNKIPAVQTRVAKLIGFHQAMLAHIVASEELGFHTPGGAYKPNILIYDF 365 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHHHHHHHH-----TCTTSHHHHHHHHHHHHHHHHHHHHHHHHHHTCEECTTCCEECCHHHHHH
T ss_pred HHHHHHHHHHHHHHHHHHHHHHHHh-----CCcccHHHHHHHHHHHHHHHHHHHHHHHHHHhcccCCCCCcCcCHHHHHH
Confidence 22344566666666666666543 27899999999999999999999999988765432 2 144567899
Q ss_pred HHHHHHHHHHHHHHHHHHhhCCCCCC
Q psy13265 180 AKALAADVANKCATDAVQVFGGNGFN 205 (245)
Q Consensus 180 ~K~~~~~~~~~~~~~~~~~~G~~~~~ 205 (245)
+|.++++...++++++++++||.++.
T Consensus 366 aK~~a~~~~~rv~~eaiqi~GG~g~~ 391 (517)
T 4g5e_A 366 GRALYLENFSQMIYELVDLSGRSALI 391 (517)
T ss_dssp HHHHHHHHHHHHHHHHHHHHGGGTTC
T ss_pred HHHHHHHHHHHHHHHHHHHhCCcccc
Confidence 99999999999999999999999997
No 42
>3owa_A Acyl-COA dehydrogenase; structural genomics, center for structural genomics of infec diseases, csgid, alpha-structure, beta-barrel; HET: MSE FAD 1PE; 1.97A {Bacillus anthracis}
Probab=95.98 E-value=0.12 Score=46.67 Aligned_cols=108 Identities=9% Similarity=0.152 Sum_probs=87.2
Q ss_pred cCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc-CCCc-hhHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCCh
Q psy13265 132 FGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDL-GRRN-TLYASVAKALAADVANKCATDAVQVFGGNGFNSDYP 209 (245)
Q Consensus 132 ~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~-~~~~-~~~~~~~K~~~~~~~~~~~~~~~~~~G~~~~~~~~~ 209 (245)
+|+.+.+.|.+..+++++...++++.+.+.++...+.. +.+. ..+..+++.|+.+...++-..+.++. .++.++..
T Consensus 482 ~~~~~~~~q~~l~~~ad~~~~~y~~~~~~~r~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~--~~~~~~~~ 559 (597)
T 3owa_A 482 YGKALDKEQEILVNIADIVSNLYAMESAVLRTEKAIKTTGLEKNKQKVLYTEVFCQEAFNEIEAHAKETL--IAVENGDM 559 (597)
T ss_dssp HGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCSGGGHHHHHHHHHHHHHHHHHHHHHHHHHH--HHHCCHHH
T ss_pred hCCcHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhhhcCccchHHHHHHHHHHHHHHHHHHHHHHHHHH--HhhccchH
Confidence 46788899999999999999999999999999988874 4443 55789999999999999999999998 56667777
Q ss_pred HHHHHHhhccccccCC-hHHHHHHHHHHHHHHH
Q psy13265 210 VEKLMRDAKIYQIYEG-TAQIQRLIVSRAIIEK 241 (245)
Q Consensus 210 l~r~~rd~~~~~~~~g-~~~~~~~~i~~~~l~~ 241 (245)
+..++..++-+..+.+ ....++..|++.++..
T Consensus 560 ~~~~~~~~~~~~~~~~~~~~~~~~~~a~~~~~~ 592 (597)
T 3owa_A 560 LRMMLSSLRKLTRHTPLNVIPKKREIAAKILED 592 (597)
T ss_dssp HHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHhCCCCCchHHHHHHHHHHHHHc
Confidence 7777777776665555 3455666888887753
No 43
>2uxw_A VERY-long-chain specific acyl-COA dehydrogenase; fatty acid metabolism, transit peptide, disease mutation, LI metabolism, coenzyme A dehydrogenase; HET: FAD TH3; 1.45A {Homo sapiens} PDB: 3b96_A*
Probab=85.20 E-value=15 Score=33.12 Aligned_cols=68 Identities=16% Similarity=0.109 Sum_probs=54.7
Q ss_pred cCCCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCc-hhHHHHHHHHHHHHHHHHHHHHHHhh
Q psy13265 132 FGVPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRRN-TLYASVAKALAADVANKCATDAVQVF 199 (245)
Q Consensus 132 ~g~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~~-~~~~~~~K~~~~~~~~~~~~~~~~~~ 199 (245)
.+..+.+.+.+..+|+++...++.+.+.+.++...++.+.+. ..+..+++.|+.+...++-..+..+.
T Consensus 506 ~~~~~~~~~~~~~rl~d~~~~~y~~~~~l~r~~~~~~~g~~~~~~~~~~a~~~~~~~~~~~~~~~~~~~ 574 (607)
T 2uxw_A 506 HKKGIVNEQFLLQRLADGAIDLYAMVVVLSRASRSLSEGHPTAQHEKMLCDTWCIEAAARIREGMAALQ 574 (607)
T ss_dssp HGGGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHTCTTHHHHHHHHHHHHHHHHHHHHHHHHHHH
T ss_pred hCccHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhCCCcchHHHHHHHHHHHHHHHHHHHHHHHHHh
Confidence 345677889999999999999999999999988777665554 34688899999888888877777744
No 44
>2z1q_A Acyl-COA dehydrogenase; FAD, structural genomics, NPPSFA, Na project on protein structural and functional analyses; HET: FAD; 2.30A {Thermus thermophilus}
Probab=83.47 E-value=24 Score=31.42 Aligned_cols=100 Identities=17% Similarity=0.145 Sum_probs=72.0
Q ss_pred CCCcccHHHHHHHHHHHHHHHHHHHHHHHHHHHHhcCCCchhHHHHHHHHHHHHHHHHHHHHHHhhCCCCCCCCChHHHH
Q psy13265 134 VPIAAHQAVAFMLADMAIGIEASRLTWMKAAAEVDLGRRNTLYASVAKALAADVANKCATDAVQVFGGNGFNSDYPVEKL 213 (245)
Q Consensus 134 ~~~~~~~~~q~~lae~~~~l~~~~al~~~~~~~~~~~~~~~~~~~~~K~~~~~~~~~~~~~~~~~~G~~~~~~~~~l~r~ 213 (245)
..+.+.+.+..+++++.+.++.+++.+.++... .+. ...+++.|+.+...++...+.+++ .++.++.|.-.+
T Consensus 470 ~~l~~~q~~l~~lad~~~~~~~~~~~l~r~~~~--~~~----~~~l~~~~~~~~~~~~~~~~~~~~--~~~~~~~~~~~~ 541 (577)
T 2z1q_A 470 QGVEEEQEVLGAVADILIDAYAAESALLRARRL--GGL----APVLARIYLAQALDRAQAGALSVL--PRLVEGDEARVV 541 (577)
T ss_dssp GGGGGCHHHHHHHHHHHHHHHHHHHHHHHHHHH--CTT----HHHHHHHHHHHHHHHHHHHHHHHG--GGTCCTTTTHHH
T ss_pred hhHHHHHHHHHHHHHHHHHHHHHHHHHHHHHhc--cCc----HHHHHHHHHHHHHHHHHHHHHHHH--HHHHcCCchhHH
Confidence 344456788999999999999999998888765 221 788899999999999888887777 445566554443
Q ss_pred HHhhcccc-ccCChHHHHHHHHHHHHHHH
Q psy13265 214 MRDAKIYQ-IYEGTAQIQRLIVSRAIIEK 241 (245)
Q Consensus 214 ~rd~~~~~-~~~g~~~~~~~~i~~~~l~~ 241 (245)
...++.+. ....+++.+...|++.++..
T Consensus 542 ~~~~~~~~~~~~~~~~~~~~~ia~~~~~~ 570 (577)
T 2z1q_A 542 YSAARRLTKREPGDLVALRRQAAEAVLEA 570 (577)
T ss_dssp HHHHHHHTCCCCCCHHHHHHHHHHHHHHH
T ss_pred HHHHHHhcccCCCChHHHHHHHHHHHHhc
Confidence 33333333 33446777888999988754
Done!