BLASTP 2.2.26 [Sep-21-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.


Reference for compositional score matrix adjustment: Altschul, Stephen F., 
John C. Wootton, E. Michael Gertz, Richa Agarwala, Aleksandr Morgulis,
Alejandro A. Schaffer, and Yi-Kuo Yu (2005) "Protein database searches
using compositionally adjusted substitution matrices", FEBS J. 272:5101-5109.

Query= psy13278
         (174 letters)

Database: swissprot 
           539,616 sequences; 191,569,459 total letters

Searching..................................................done



>sp|Q99104|MYO5A_MOUSE Unconventional myosin-Va OS=Mus musculus GN=Myo5a PE=1 SV=2
          Length = 1853

 Score =  107 bits (266), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 92/150 (61%), Gaps = 15/150 (10%)

Query: 37   EMCNKMSTNQVRAVSTSQV----RDLNRIKSVHKV-------ASQLLQARK-TQEDVNTV 84
            +MC+     Q+R  + SQ+    RD N + S  K        A+QLLQ +K T +D   +
Sbjct: 1707 DMCSWSKGMQIR-YNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDDDAEAI 1765

Query: 85   CEMCNKMSTNQIIKLLNLYTPADDYEERISQSFIHLIQEKLKERPQSEQSTLLMDTKFNF 144
            C MCN ++T QI+K+LNLYTP +++EER+S SFI  IQ +L++R  S Q  LLMD K  F
Sbjct: 1766 CSMCNALTTAQIVKVLNLYTPVNEFEERVSVSFIRTIQMRLRDRKDSPQ--LLMDAKHIF 1823

Query: 145  SVRFPFSASNIQLEHIEIPDVLQVPMLKKI 174
             V FPF+ S++ LE I+IP  L +  + ++
Sbjct: 1824 PVTFPFNPSSLALETIQIPASLGLGFIARV 1853


>sp|Q9QYF3|MYO5A_RAT Unconventional myosin-Va OS=Rattus norvegicus GN=Myo5a PE=1 SV=1
          Length = 1828

 Score =  107 bits (266), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 92/150 (61%), Gaps = 15/150 (10%)

Query: 37   EMCNKMSTNQVRAVSTSQV----RDLNRIKSVHKV-------ASQLLQARK-TQEDVNTV 84
            +MC+     Q+R  + SQ+    RD N + S  K        A+QLLQ +K T +D   +
Sbjct: 1682 DMCSWSKGMQIR-YNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDDDAEAI 1740

Query: 85   CEMCNKMSTNQIIKLLNLYTPADDYEERISQSFIHLIQEKLKERPQSEQSTLLMDTKFNF 144
            C MCN ++T QI+K+LNLYTP +++EER+S SFI  IQ +L++R  S Q  LLMD K  F
Sbjct: 1741 CSMCNALTTAQIVKVLNLYTPVNEFEERVSVSFIRTIQVRLRDRKDSPQ--LLMDAKHIF 1798

Query: 145  SVRFPFSASNIQLEHIEIPDVLQVPMLKKI 174
             V FPF+ S++ LE I+IP  L +  + ++
Sbjct: 1799 PVTFPFNPSSLALETIQIPASLGLGFIARV 1828


>sp|Q9Y4I1|MYO5A_HUMAN Unconventional myosin-Va OS=Homo sapiens GN=MYO5A PE=1 SV=2
          Length = 1855

 Score =  107 bits (266), Expect = 5e-23,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 92/150 (61%), Gaps = 15/150 (10%)

Query: 37   EMCNKMSTNQVRAVSTSQV----RDLNRIKSVHKV-------ASQLLQARK-TQEDVNTV 84
            +MC+     Q+R  + SQ+    RD N + S  K        A+QLLQ +K T +D   +
Sbjct: 1709 DMCSWSKGMQIR-YNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDDDAEAI 1767

Query: 85   CEMCNKMSTNQIIKLLNLYTPADDYEERISQSFIHLIQEKLKERPQSEQSTLLMDTKFNF 144
            C MCN ++T QI+K+LNLYTP +++EER+S SFI  IQ +L++R  S Q  LLMD K  F
Sbjct: 1768 CSMCNALTTAQIVKVLNLYTPVNEFEERVSVSFIRTIQMRLRDRKDSPQ--LLMDAKHIF 1825

Query: 145  SVRFPFSASNIQLEHIEIPDVLQVPMLKKI 174
             V FPF+ S++ LE I+IP  L +  + ++
Sbjct: 1826 PVTFPFNPSSLALETIQIPASLGLGFISRV 1855


>sp|Q02440|MYO5A_CHICK Unconventional myosin-Va OS=Gallus gallus GN=MYO5A PE=1 SV=1
          Length = 1829

 Score =  105 bits (262), Expect = 2e-22,   Method: Compositional matrix adjust.
 Identities = 63/150 (42%), Positives = 91/150 (60%), Gaps = 15/150 (10%)

Query: 37   EMCNKMSTNQVRAVSTSQV----RDLNRIKSVHKV-------ASQLLQARK-TQEDVNTV 84
            +MC+     Q+R  + SQ+    RD N + S  K        A+QLLQ +K T ED   +
Sbjct: 1683 DMCSWSKGMQIR-YNVSQLEEWLRDKNLMNSGAKETLEPLIQAAQLLQVKKKTDEDAEAI 1741

Query: 85   CEMCNKMSTNQIIKLLNLYTPADDYEERISQSFIHLIQEKLKERPQSEQSTLLMDTKFNF 144
            C MCN ++T QI+K+LNLYTP +++EER+  SFI  IQ +L++R  S Q  LLMD K  F
Sbjct: 1742 CSMCNALTTAQIVKVLNLYTPVNEFEERVLVSFIRTIQLRLRDRKDSPQ--LLMDAKHIF 1799

Query: 145  SVRFPFSASNIQLEHIEIPDVLQVPMLKKI 174
             V FPF+ S++ LE I+IP  L +  + ++
Sbjct: 1800 PVTFPFNPSSLALETIQIPASLGLGFISRV 1829


>sp|Q9ULV0|MYO5B_HUMAN Unconventional myosin-Vb OS=Homo sapiens GN=MYO5B PE=1 SV=3
          Length = 1848

 Score =  102 bits (253), Expect = 1e-21,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 93/150 (62%), Gaps = 15/150 (10%)

Query: 37   EMCNKMSTNQVRAVSTSQVRDLNRIKSVHKV-----------ASQLLQ-ARKTQEDVNTV 84
            ++C+  +  Q+R  + SQ+ +  R +++H+            A+QLLQ  +KTQED   +
Sbjct: 1702 DVCSWSTGMQLR-YNISQLEEWLRGRNLHQSGAVQTMEPLIQAAQLLQLKKKTQEDAEAI 1760

Query: 85   CEMCNKMSTNQIIKLLNLYTPADDYEERISQSFIHLIQEKLKERPQSEQSTLLMDTKFNF 144
            C +C  +ST QI+K+LNLYTP +++EER++ +FI  IQ +L+ER   +Q  LL+D K  F
Sbjct: 1761 CSLCTSLSTQQIVKILNLYTPLNEFEERVTVAFIRTIQAQLQERNDPQQ--LLLDAKHMF 1818

Query: 145  SVRFPFSASNIQLEHIEIPDVLQVPMLKKI 174
             V FPF+ S++ ++ I IP  L +  L ++
Sbjct: 1819 PVLFPFNPSSLTMDSIHIPACLNLEFLNEV 1848


>sp|P70569|MYO5B_RAT Unconventional myosin-Vb OS=Rattus norvegicus GN=Myo5b PE=1 SV=1
          Length = 1846

 Score =  101 bits (251), Expect = 3e-21,   Method: Compositional matrix adjust.
 Identities = 50/108 (46%), Positives = 73/108 (67%), Gaps = 3/108 (2%)

Query: 68   ASQLLQ-ARKTQEDVNTVCEMCNKMSTNQIIKLLNLYTPADDYEERISQSFIHLIQEKLK 126
            A+QLLQ  +KTQED   +C +C  +ST QI+K+LNLYTP + +EER++ SFI  IQ +L+
Sbjct: 1741 AAQLLQLKKKTQEDAEAICSLCTSLSTQQIVKILNLYTPLNGFEERVTVSFIRTIQAQLQ 1800

Query: 127  ERPQSEQSTLLMDTKFNFSVRFPFSASNIQLEHIEIPDVLQVPMLKKI 174
            ER   +Q  LL+D+K  F V FPF+ S + ++ I IP  L +  L ++
Sbjct: 1801 ERSDPQQ--LLLDSKHMFPVLFPFNPSALTMDSIHIPACLNLEFLNEV 1846


>sp|P21271|MYO5B_MOUSE Unconventional myosin-Vb OS=Mus musculus GN=Myo5b PE=2 SV=2
          Length = 1818

 Score = 99.8 bits (247), Expect = 8e-21,   Method: Compositional matrix adjust.
 Identities = 56/150 (37%), Positives = 91/150 (60%), Gaps = 15/150 (10%)

Query: 37   EMCNKMSTNQVRAVSTSQVRDLNRIKSVHKV-----------ASQLLQ-ARKTQEDVNTV 84
            + C+  +  Q+R  + SQ+ +  R K++H+            A+QLLQ  +KT ED   +
Sbjct: 1672 DACSWSTGMQLR-YNISQLEEWLRGKNLHQSGAVQTMEPLIQAAQLLQLKKKTHEDAEAI 1730

Query: 85   CEMCNKMSTNQIIKLLNLYTPADDYEERISQSFIHLIQEKLKERPQSEQSTLLMDTKFNF 144
            C +C  +ST QI+K+LNLYTP +++EER++ SFI  IQ +L+ER   +Q  LL+D+K  F
Sbjct: 1731 CSLCTSLSTQQIVKILNLYTPLNEFEERVTVSFIRTIQAQLQERNDPQQ--LLLDSKHVF 1788

Query: 145  SVRFPFSASNIQLEHIEIPDVLQVPMLKKI 174
             V FP++ S + ++ I IP  L +  L ++
Sbjct: 1789 PVLFPYNPSALTMDSIHIPACLNLEFLNEV 1818


>sp|Q9NQX4|MYO5C_HUMAN Unconventional myosin-Vc OS=Homo sapiens GN=MYO5C PE=1 SV=2
          Length = 1742

 Score = 87.8 bits (216), Expect = 3e-17,   Method: Compositional matrix adjust.
 Identities = 46/108 (42%), Positives = 67/108 (62%), Gaps = 3/108 (2%)

Query: 68   ASQLLQARKTQE-DVNTVCEMCNKMSTNQIIKLLNLYTPADDYEERISQSFIHLIQEKLK 126
            A+ LLQ +KT + D   + E C  +S  QIIK+LN YTP DD+E+R++ SF+  +Q  L 
Sbjct: 1637 AAWLLQVKKTTDSDAKEIYERCTSLSAVQIIKILNSYTPIDDFEKRVTPSFVRKVQALLN 1696

Query: 127  ERPQSEQSTLLMDTKFNFSVRFPFSASNIQLEHIEIPDVLQVPMLKKI 174
             R  S Q  L++DTK+ F V FPF+ S   LE I+IP   ++  L ++
Sbjct: 1697 SREDSSQ--LMLDTKYLFQVTFPFTPSPHALEMIQIPSSFKLGFLNRL 1742


>sp|Q875Q8|MYO2_LACK1 Myosin-2 OS=Lachancea kluyveri (strain ATCC 58438 / CBS 3082 / CCRC
            21498 / NBRC 1685 / JCM 7257 / NCYC 543 / NRRL Y-12651)
            GN=MYO2 PE=3 SV=1
          Length = 1554

 Score = 43.5 bits (101), Expect = 7e-04,   Method: Compositional matrix adjust.
 Identities = 34/123 (27%), Positives = 60/123 (48%), Gaps = 22/123 (17%)

Query: 68   ASQLLQARKTQ-EDVNTVCEMCNKMSTNQIIKLLNLYTPADDYEERISQSFIHLIQEKLK 126
            AS+LLQ +K   ED+N + E+C+ +   QI KL++ Y  A DYE  I Q  ++ + +++K
Sbjct: 1421 ASKLLQLKKANLEDINIIWEICSSLKPAQIQKLISQYAVA-DYEVPIPQEILNFVADRVK 1479

Query: 127  E--------RPQSEQSTLLMDTKFNFSVRFPFSASNIQLEHIE-------IPDVLQVPML 171
            +        + Q+  S + +          PF     Q+E  E       IP  L +P+ 
Sbjct: 1480 KESSLSSDGKSQTHSSDIFLSVDSG-----PFEDPFGQIETREFGKIEAYIPAWLNLPIT 1534

Query: 172  KKI 174
            +++
Sbjct: 1535 RRV 1537


>sp|Q875X3|MYO2A_NAUCC Myosin-2A OS=Naumovozyma castellii (strain ATCC 76901 / CBS 4309 /
            NBRC 1992 / NRRL Y-12630) GN=MYO2A PE=3 SV=2
          Length = 1567

 Score = 39.7 bits (91), Expect = 0.010,   Method: Compositional matrix adjust.
 Identities = 35/113 (30%), Positives = 60/113 (53%), Gaps = 12/113 (10%)

Query: 69   SQLLQARK-TQEDVNTVCEMCNKMSTNQIIKLLNLYTPADDYEERISQSFIHLIQEKLKE 127
            ++LLQ RK T ED++ V  +C+ +S  Q+ KL++ Y  A DYE  I Q  +  + + +K+
Sbjct: 1447 AKLLQLRKYTIEDIDMVRGICSSLSPAQLQKLISQYHVA-DYESPIPQDILKYVADIVKK 1505

Query: 128  RPQSEQSTLLMDTK---FNFSVRFPFSASNI-QLEHIE--IPDVLQVPMLKKI 174
               S  + + +  +   FN     PF A    + + +E  IP  L +P+ K+I
Sbjct: 1506 ESTSAHNDIFLHPETGPFN----DPFVAVKTRKFDQVEAYIPSWLVLPVTKRI 1554


>sp|Q876G9|MYO2_SACBA Myosin-2 OS=Saccharomyces bayanus GN=MYO2 PE=3 SV=2
          Length = 1568

 Score = 34.3 bits (77), Expect = 0.41,   Method: Compositional matrix adjust.
 Identities = 33/117 (28%), Positives = 56/117 (47%), Gaps = 12/117 (10%)

Query: 69   SQLLQARK-TQEDVNTVCEMCNKMSTNQIIKLLNLYTPADDYEERISQSFIHLIQEKLKE 127
            ++LLQ RK T ED++ +  +C  ++  Q+ KL++ Y  A DYE  I Q  +  + + +K+
Sbjct: 1440 AKLLQVRKYTIEDIDILRGICYSLTPAQLQKLISQYQVA-DYESPIPQEILRYVADIVKK 1498

Query: 128  RP-------QSEQSTLLMDTKFNFSVRFPFSASNI-QLEHIE--IPDVLQVPMLKKI 174
                       E S+ +  T        PFS     + + +E  IP  L +P  K+I
Sbjct: 1499 EAALSNDSKGHEHSSGIFITPETGPFTDPFSLIKTRKFDQVEAYIPAWLSLPATKRI 1555


>sp|Q6B966|NAL14_MOUSE NACHT, LRR and PYD domains-containing protein 14 OS=Mus musculus
           GN=Nlrp14 PE=2 SV=2
          Length = 993

 Score = 32.3 bits (72), Expect = 1.4,   Method: Compositional matrix adjust.
 Identities = 31/126 (24%), Positives = 57/126 (45%), Gaps = 12/126 (9%)

Query: 61  IKSVHKVASQLLQARKTQEDVNTVCEMCNKMSTNQIIKLL-NLYT---------PADDYE 110
           +K  H + +  L AR   +++    EMC + +  Q+I    +L++           D YE
Sbjct: 525 LKHCHTLKTMRLTARADLKNMLDTAEMCLEGAAVQVIHYWQDLFSVLHTNESLIEMDLYE 584

Query: 111 ERISQSFIHLIQEKLKERPQSEQSTLLMDTKF-NFSVRFPFSASNIQLEHIEIPDV-LQV 168
            R+ +S + ++ E+L       Q  +     F N    F F ASN ++ H+++ +  L V
Sbjct: 585 SRLDESLMKILNEELSHPKCKLQKLIFRAVDFLNGCQDFTFLASNKKVTHLDLKETDLGV 644

Query: 169 PMLKKI 174
             LK +
Sbjct: 645 NGLKTL 650


>sp|Q875X4|MYO2B_NAUCC Myosin-2B OS=Naumovozyma castellii (strain ATCC 76901 / CBS 4309 /
            NBRC 1992 / NRRL Y-12630) GN=MYO2B PE=3 SV=2
          Length = 1419

 Score = 32.3 bits (72), Expect = 1.5,   Method: Compositional matrix adjust.
 Identities = 24/76 (31%), Positives = 40/76 (52%), Gaps = 12/76 (15%)

Query: 31   DVNTVCEMCNKMSTNQVRAVSTSQVRDLNRIKSVHKVASQLLQARKTQ-EDVNTVCEMCN 89
            ++  V + CN   ++++R  ST  +R++N+       A +LLQ R +   D   VCE C 
Sbjct: 1272 EIKKVLDWCN---SHKIRN-STEYLRNVNQ-------ACKLLQLRISNISDFQLVCEFCY 1320

Query: 90   KMSTNQIIKLLNLYTP 105
             +S+ Q+  LL  Y P
Sbjct: 1321 DLSSLQMHALLTKYRP 1336


>sp|P19524|MYO2_YEAST Myosin-2 OS=Saccharomyces cerevisiae (strain ATCC 204508 / S288c)
            GN=MYO2 PE=1 SV=1
          Length = 1574

 Score = 32.3 bits (72), Expect = 1.7,   Method: Compositional matrix adjust.
 Identities = 33/120 (27%), Positives = 56/120 (46%), Gaps = 15/120 (12%)

Query: 69   SQLLQARK-TQEDVNTVCEMCNKMSTNQIIKLLNLYTPADDYEERISQSFIHLIQEKLKE 127
            ++LLQ RK T ED++ +  +C  ++  Q+ KL++ Y  A DYE  I Q  +  + + +K+
Sbjct: 1443 AKLLQVRKYTIEDIDILRGICYSLTPAQLQKLISQYQVA-DYESPIPQEILRYVADIVKK 1501

Query: 128  RP----------QSEQSTLLMDTKFNFSVRFPFSASNI-QLEHIE--IPDVLQVPMLKKI 174
                          E S+ +  T        PFS     + + +E  IP  L +P  K+I
Sbjct: 1502 EAALSSSGNDSKGHEHSSSIFITPETGPFTDPFSLIKTRKFDQVEAYIPAWLSLPSTKRI 1561


>sp|Q86K80|U420_DICDI UPF0420 protein OS=Dictyostelium discoideum GN=DDB_G0277179 PE=3
           SV=1
          Length = 527

 Score = 32.0 bits (71), Expect = 1.8,   Method: Composition-based stats.
 Identities = 14/48 (29%), Positives = 29/48 (60%), Gaps = 2/48 (4%)

Query: 76  KTQEDVNTVCEMCNKMSTNQIIKLLNLYTPADDYEERISQSFIHLIQE 123
           K+Q+ +N +  +  K  +N II    + +P DDY++R+  +F+  I++
Sbjct: 6   KSQQSINKINCIIEKNQSNSIINKFQVASPYDDYDDRL--NFLETIEK 51


>sp|Q8K9Q6|FABI_BUCAP Enoyl-[acyl-carrier-protein] reductase [NADH] FabI OS=Buchnera
           aphidicola subsp. Schizaphis graminum (strain Sg)
           GN=fabI PE=3 SV=1
          Length = 260

 Score = 32.0 bits (71), Expect = 2.1,   Method: Compositional matrix adjust.
 Identities = 14/63 (22%), Positives = 34/63 (53%)

Query: 40  NKMSTNQVRAVSTSQVRDLNRIKSVHKVASQLLQARKTQEDVNTVCEMCNKMSTNQIIKL 99
           N +S+  ++  S+ Q+++ N+I+ +HK+ S       ++E  N    +C+ +S      +
Sbjct: 185 NAISSGPIKTTSSYQIKNFNKIQKIHKLFSLTKNHVSSEEIGNVAAFLCSDLSIGITGSI 244

Query: 100 LNL 102
           +N+
Sbjct: 245 INV 247


>sp|O03068|ATPB_DENPU ATP synthase subunit beta, chloroplastic (Fragment)
          OS=Dennstaedtia punctilobula GN=atpB PE=3 SV=2
          Length = 486

 Score = 31.2 bits (69), Expect = 3.2,   Method: Compositional matrix adjust.
 Identities = 13/31 (41%), Positives = 19/31 (61%)

Query: 30 EDVNTVCEMCNKMSTNQVRAVSTSQVRDLNR 60
          +D+N  CE+   +  N+VRAV+TS    L R
Sbjct: 39 QDINVTCEVQQLLGNNEVRAVATSATDGLMR 69


>sp|P59415|TRPD_BUCBP Anthranilate phosphoribosyltransferase OS=Buchnera aphidicola
           subsp. Baizongia pistaciae (strain Bp) GN=trpD PE=3 SV=1
          Length = 331

 Score = 30.4 bits (67), Expect = 5.9,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 37/76 (48%), Gaps = 4/76 (5%)

Query: 53  SQVRDLNRIKSVHKVASQLLQARKTQEDVNTVCEMCNKMSTNQIIKLLNLYTP----ADD 108
           +QVR + RIK++  + + LL     +  V  VC     +   Q++K LN +      +D+
Sbjct: 162 TQVRKILRIKTIFNIIAPLLNPAMPKLTVMGVCNFKLMLPIAQVLKTLNYHHAIIVCSDN 221

Query: 109 YEERISQSFIHLIQEK 124
            +E    SF  +I+ K
Sbjct: 222 IDEVTLHSFTKIIELK 237


>sp|P87060|POP1_SCHPO WD repeat-containing protein pop1 OS=Schizosaccharomyces pombe
           (strain 972 / ATCC 24843) GN=pop1 PE=1 SV=1
          Length = 775

 Score = 30.4 bits (67), Expect = 6.7,   Method: Compositional matrix adjust.
 Identities = 21/76 (27%), Positives = 35/76 (46%), Gaps = 1/76 (1%)

Query: 94  NQIIKLLNLYTPADDYEERISQSFI-HLIQEKLKERPQSEQSTLLMDTKFNFSVRFPFSA 152
           N ++KL  L +  +   E + Q  + HL+    K   Q+    LL   + NF   FP   
Sbjct: 249 NAVLKLAQLISSFEKLPESVRQYLLFHLLSRCGKHAVQNIHKILLPIFQKNFLTGFPAEI 308

Query: 153 SNIQLEHIEIPDVLQV 168
           +N+ L H++ P +  V
Sbjct: 309 TNLVLTHLDAPSLCAV 324


>sp|Q75A03|DIA2_ASHGO Protein DIA2 OS=Ashbya gossypii (strain ATCC 10895 / CBS 109.51 /
           FGSC 9923 / NRRL Y-1056) GN=DIA2 PE=3 SV=2
          Length = 685

 Score = 30.0 bits (66), Expect = 7.9,   Method: Compositional matrix adjust.
 Identities = 22/92 (23%), Positives = 48/92 (52%), Gaps = 2/92 (2%)

Query: 54  QVRDLNRIKSVHKVAS--QLLQARKTQEDVNTVCEMCNKMSTNQIIKLLNLYTPADDYEE 111
           ++ D N +K +  + +  +L   R T  + + +     ++   + ++ L    P + + +
Sbjct: 441 RLGDRNNLKWISDMPNLQELWLERNTGIEFHELITQIVQVGAPKTLRHLTFREPPNRHFD 500

Query: 112 RISQSFIHLIQEKLKERPQSEQSTLLMDTKFN 143
           R+ QS + L +E L+E  QS +S  LM+T+F+
Sbjct: 501 RMDQSQLGLGEEALREVFQSLESLDLMNTRFD 532


  Database: swissprot
    Posted date:  Mar 23, 2013  2:32 AM
  Number of letters in database: 191,569,459
  Number of sequences in database:  539,616
  
Lambda     K      H
   0.317    0.127    0.341 

Lambda     K      H
   0.267   0.0410    0.140 


Matrix: BLOSUM62
Gap Penalties: Existence: 11, Extension: 1
Number of Hits to DB: 50,068,553
Number of Sequences: 539616
Number of extensions: 1632842
Number of successful extensions: 7067
Number of sequences better than 100.0: 45
Number of HSP's better than 100.0 without gapping: 13
Number of HSP's successfully gapped in prelim test: 32
Number of HSP's that attempted gapping in prelim test: 7025
Number of HSP's gapped (non-prelim): 67
length of query: 174
length of database: 191,569,459
effective HSP length: 109
effective length of query: 65
effective length of database: 132,751,315
effective search space: 8628835475
effective search space used: 8628835475
T: 11
A: 40
X1: 16 ( 7.3 bits)
X2: 38 (14.6 bits)
X3: 64 (24.7 bits)
S1: 41 (21.7 bits)
S2: 57 (26.6 bits)