Query psy13279
Match_columns 287
No_of_seqs 195 out of 2227
Neff 6.7
Searched_HMMs 29240
Date Sat Aug 17 00:42:44 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13279.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13279hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2z6w_A Peptidyl-prolyl CIS-tra 100.0 1E-42 3.4E-47 297.3 12.5 144 1-284 8-163 (165)
2 2cmt_A Peptidyl-prolyl CIS-tra 100.0 9.8E-43 3.4E-47 299.1 12.5 144 1-284 15-170 (172)
3 2r99_A Peptidyl-prolyl CIS-tra 100.0 1E-42 3.4E-47 299.4 12.3 144 1-284 16-171 (173)
4 2haq_A Cyclophilin; rotamase, 100.0 1.2E-42 4.1E-47 298.5 11.9 143 1-284 16-171 (172)
5 1a58_A Cyclophilin; isomerase, 100.0 2.9E-42 9.8E-47 297.6 12.5 143 1-284 11-175 (177)
6 2wfi_A Peptidyl-prolyl CIS-tra 100.0 3.2E-42 1.1E-46 297.8 12.7 143 1-284 14-178 (179)
7 3pmp_A Cyclophilin A; peptidyl 100.0 3.5E-42 1.2E-46 293.7 12.5 144 1-284 7-162 (164)
8 2igv_A Peptidyl-prolyl CIS-tra 100.0 3.2E-42 1.1E-46 296.3 11.9 144 1-284 8-170 (173)
9 2poy_A Peptidyl-prolyl CIS-tra 100.0 4E-42 1.4E-46 298.6 12.2 144 1-284 24-186 (186)
10 3ich_A Peptidyl-prolyl CIS-tra 100.0 5.7E-42 1.9E-46 298.2 11.8 144 1-284 20-176 (188)
11 1qng_A Peptidyl-prolyl CIS-tra 100.0 6E-42 2E-46 293.8 11.0 143 1-284 8-169 (170)
12 2he9_A NK-tumor recognition pr 100.0 1.6E-41 5.4E-46 296.2 12.6 143 1-284 24-188 (192)
13 3rdd_A Peptidyl-prolyl CIS-tra 100.0 4.3E-41 1.5E-45 291.8 11.7 144 1-284 27-182 (184)
14 1mzw_A Cyclophilin H, U-snRNP- 100.0 4.4E-41 1.5E-45 290.1 11.6 144 1-284 15-176 (177)
15 4fru_A Cyclophilin B, peptidyl 100.0 7.8E-41 2.7E-45 290.5 11.8 144 1-284 17-173 (185)
16 3k2c_A Peptidyl-prolyl CIS-tra 100.0 1.1E-40 3.9E-45 291.1 12.6 144 1-284 32-189 (193)
17 2c3b_A Ppiase, cyclophilin; is 100.0 4.2E-41 1.4E-45 289.0 6.5 144 1-284 7-171 (172)
18 1z81_A Cyclophilin; structural 100.0 7.4E-40 2.5E-44 292.2 10.8 143 1-284 64-228 (229)
19 2fu0_A Cyclophilin, putative; 100.0 3.7E-39 1.3E-43 273.9 10.9 125 3-270 7-132 (160)
20 2x7k_A Peptidyl-prolyl CIS-tra 100.0 5E-39 1.7E-43 274.7 10.3 125 3-270 13-138 (166)
21 2poe_A Cyclophilin-like protei 100.0 7.5E-39 2.6E-43 277.9 10.6 125 2-270 18-147 (185)
22 2ok3_A Peptidyl-prolyl CIS-tra 100.0 1.9E-38 6.4E-43 269.9 10.9 123 5-270 4-127 (161)
23 2a2n_A Peptidylprolyl isomeras 100.0 1.6E-38 5.3E-43 273.9 10.5 126 2-270 22-148 (176)
24 2ose_A Probable peptidyl-proly 100.0 9.7E-39 3.3E-43 286.3 9.0 146 1-284 19-205 (234)
25 1zkc_A Peptidyl-prolyl CIS-tra 100.0 2.7E-38 9.2E-43 276.6 11.2 125 3-270 21-146 (197)
26 2b71_A Cyclophilin-like protei 100.0 2.6E-38 8.7E-43 276.6 10.5 124 4-270 41-165 (196)
27 1ihg_A Cyclophilin 40; ppiase 100.0 8.4E-38 2.9E-42 295.8 12.6 131 1-270 20-158 (370)
28 3bo7_A Peptidyl-prolyl CIS-tra 100.0 6.4E-38 2.2E-42 275.4 10.6 132 3-270 8-145 (201)
29 2k7n_A Peptidyl-prolyl CIS-tra 100.0 5.6E-38 1.9E-42 275.6 9.2 125 3-270 13-138 (203)
30 1w74_A Peptidyl-prolyl CIS-tra 100.0 2.4E-37 8.1E-42 269.6 10.9 123 4-270 26-164 (191)
31 2hq6_A Serologically defined c 100.0 3.6E-37 1.2E-41 267.3 10.1 126 3-272 26-152 (185)
32 3bkp_A Cyclophilin; malaria, i 100.0 7.8E-36 2.7E-40 267.1 9.6 125 3-270 23-163 (232)
33 1v9t_A Cyclophilin B; beta bar 100.0 1.6E-35 5.4E-40 253.0 10.9 123 3-270 6-134 (166)
34 1lop_A Cyclophilin A; rotamase 100.0 8.6E-36 2.9E-40 254.2 8.8 122 4-270 2-132 (164)
35 3s6m_A Peptidyl-prolyl CIS-tra 100.0 6E-35 2.1E-39 249.6 8.4 122 4-270 6-136 (167)
36 3rfy_A Peptidyl-prolyl CIS-tra 100.0 2.6E-32 8.9E-37 257.9 12.0 136 9-270 186-338 (369)
37 2igv_A Peptidyl-prolyl CIS-tra 99.6 3.6E-16 1.2E-20 134.0 4.5 69 130-198 82-154 (173)
38 1a58_A Cyclophilin; isomerase, 99.6 4E-16 1.4E-20 134.1 4.5 68 130-197 86-157 (177)
39 1qng_A Peptidyl-prolyl CIS-tra 99.6 4.1E-16 1.4E-20 133.2 4.4 69 130-198 81-153 (170)
40 2cmt_A Peptidyl-prolyl CIS-tra 99.6 5.3E-16 1.8E-20 132.8 4.9 69 130-198 82-154 (172)
41 2z6w_A Peptidyl-prolyl CIS-tra 99.6 4.7E-16 1.6E-20 132.3 4.4 68 131-198 76-147 (165)
42 2r99_A Peptidyl-prolyl CIS-tra 99.6 5E-16 1.7E-20 133.0 4.6 68 130-197 83-154 (173)
43 1mzw_A Cyclophilin H, U-snRNP- 99.6 4.9E-16 1.7E-20 133.6 4.5 68 130-197 87-158 (177)
44 2poy_A Peptidyl-prolyl CIS-tra 99.6 6.1E-16 2.1E-20 133.9 4.2 69 130-198 98-170 (186)
45 3ich_A Peptidyl-prolyl CIS-tra 99.6 7.2E-16 2.5E-20 133.7 4.4 68 130-197 87-158 (188)
46 2wfi_A Peptidyl-prolyl CIS-tra 99.6 7.5E-16 2.6E-20 132.6 4.4 68 130-197 89-160 (179)
47 2he9_A NK-tumor recognition pr 99.6 9.4E-16 3.2E-20 133.4 4.4 68 130-197 99-170 (192)
48 2haq_A Cyclophilin; rotamase, 99.6 1.4E-15 4.7E-20 130.2 4.3 67 130-197 83-153 (172)
49 3pmp_A Cyclophilin A; peptidyl 99.6 1.9E-15 6.5E-20 128.4 4.6 69 130-198 74-146 (164)
50 4fru_A Cyclophilin B, peptidyl 99.5 2E-15 6.8E-20 130.6 4.4 68 130-197 84-155 (185)
51 3rdd_A Peptidyl-prolyl CIS-tra 99.5 3.5E-15 1.2E-19 129.0 5.0 69 130-198 94-166 (184)
52 1z81_A Cyclophilin; structural 99.5 2E-15 6.8E-20 134.5 3.0 68 130-197 136-209 (229)
53 3k2c_A Peptidyl-prolyl CIS-tra 99.5 5.6E-15 1.9E-19 128.6 4.5 69 130-198 99-171 (193)
54 2c3b_A Ppiase, cyclophilin; is 99.5 7.6E-16 2.6E-20 131.8 -1.1 69 130-198 79-153 (172)
55 1ihg_A Cyclophilin 40; ppiase 99.5 1.4E-14 4.9E-19 136.4 4.5 68 130-197 95-166 (370)
56 2ose_A Probable peptidyl-proly 99.4 4.4E-14 1.5E-18 126.3 2.8 54 144-197 120-187 (234)
57 2fu0_A Cyclophilin, putative; 99.3 7.1E-13 2.4E-17 112.1 3.2 67 131-197 69-140 (160)
58 2x7k_A Peptidyl-prolyl CIS-tra 99.3 7.2E-13 2.5E-17 112.7 3.3 68 130-197 74-146 (166)
59 1lop_A Cyclophilin A; rotamase 99.3 7.3E-13 2.5E-17 112.4 2.7 64 134-197 64-140 (164)
60 2ok3_A Peptidyl-prolyl CIS-tra 99.3 9.2E-13 3.1E-17 111.5 3.1 68 130-197 63-135 (161)
61 2a2n_A Peptidylprolyl isomeras 99.3 1.1E-12 3.9E-17 112.4 3.2 68 130-197 84-156 (176)
62 2poe_A Cyclophilin-like protei 99.3 1.1E-12 3.7E-17 113.5 3.0 68 130-197 79-155 (185)
63 2b71_A Cyclophilin-like protei 99.3 1.5E-12 5E-17 113.5 3.1 68 130-197 101-173 (196)
64 1zkc_A Peptidyl-prolyl CIS-tra 99.2 1.9E-12 6.4E-17 112.9 3.0 68 130-197 82-154 (197)
65 3bo7_A Peptidyl-prolyl CIS-tra 99.2 2.6E-12 9E-17 112.4 2.9 63 135-197 86-153 (201)
66 2k7n_A Peptidyl-prolyl CIS-tra 99.2 3.6E-12 1.2E-16 111.6 1.5 67 130-196 74-145 (203)
67 1w74_A Peptidyl-prolyl CIS-tra 99.1 9.8E-12 3.4E-16 107.9 1.3 61 137-197 105-172 (191)
68 3rfy_A Peptidyl-prolyl CIS-tra 99.1 6E-11 2.1E-15 112.1 5.5 67 131-197 262-346 (369)
69 2hq6_A Serologically defined c 99.0 1.3E-10 4.6E-15 100.3 5.2 59 130-189 87-150 (185)
70 1v9t_A Cyclophilin B; beta bar 99.0 7.1E-11 2.4E-15 100.3 2.7 61 137-197 72-142 (166)
71 3s6m_A Peptidyl-prolyl CIS-tra 99.0 1.4E-10 4.7E-15 98.6 2.7 62 136-197 70-144 (167)
72 3bkp_A Cyclophilin; malaria, i 98.9 1.2E-09 4E-14 97.5 4.8 42 147-189 104-163 (232)
73 2nnz_A Hypothetical protein; b 53.3 7.7 0.00026 31.7 2.7 23 11-33 39-61 (153)
74 3kop_A Uncharacterized protein 53.2 7.2 0.00025 33.0 2.5 27 7-33 28-55 (188)
75 2k9u_B Filamin-binding LIM pro 22.6 45 0.0015 18.9 1.6 22 155-176 1-22 (26)
No 1
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=100.00 E-value=1e-42 Score=297.32 Aligned_cols=144 Identities=58% Similarity=1.048 Sum_probs=128.4
Q ss_pred CceEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCC
Q psy13279 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNR 80 (287)
Q Consensus 1 ~d~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 80 (287)
|||+|.+|++|+|+||||.+.||+||+||++||+|+++|+|+++.||||+|+|
T Consensus 8 ~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f--------------------------- 60 (165)
T 2z6w_A 8 LDVDANGKPLGRVVLELKADVVPKTAENFRALCTGEKGFGYKGSTFHRVIPSF--------------------------- 60 (165)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTT---------------------------
T ss_pred EEEEECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCCCccCcCCEEEEEECCC---------------------------
Confidence 69999999999999999999999999999999988899999999999999999
Q ss_pred ccCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceeccccCC
Q psy13279 81 TRHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSMANSGP 160 (287)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~ 160 (287)
|+|+||+...+
T Consensus 61 -----------------------------------~iQgGd~~~~~---------------------------------- 71 (165)
T 2z6w_A 61 -----------------------------------MCQAGDFTNHN---------------------------------- 71 (165)
T ss_dssp -----------------------------------EEEECCTTTSS----------------------------------
T ss_pred -----------------------------------EEEeCCccCCC----------------------------------
Confidence 89998876432
Q ss_pred CCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhhhhhcCCCCC
Q psy13279 161 NTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLSMANSGPNTN 240 (287)
Q Consensus 161 ~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~lsMA~~~p~s~ 240 (287)
|+++.++|+..|++|+..++|.++|+|||||++|+++
T Consensus 72 -------------------------------------------g~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~s~ 108 (165)
T 2z6w_A 72 -------------------------------------------GTGGKSIYGSRFPDENFTLKHVGPGVLSMANAGPNTN 108 (165)
T ss_dssp -------------------------------------------SSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCB
T ss_pred -------------------------------------------CCCCCcccCCcccCcccccccCCCCEEEEeeCCCCCc
Confidence 3344566677788888888999999999999999999
Q ss_pred CceEEEEcCCCCCCCCCccEEEEeeecccc------------ccceeeeeeecCCC
Q psy13279 241 GSQFFLCTTKQEICVKLLDLLASLDAGWET------------RGVWKCHQWNGCGE 284 (287)
Q Consensus 241 ~SQFFIt~g~~~~LD~~ytVfG~VieG~dv------------~~~~~~~~~~~~ge 284 (287)
+||||||++++||||++|||||+|++|||| +|+.+| .|..||+
T Consensus 109 ~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~~~~~P~~~v-~I~~~g~ 163 (165)
T 2z6w_A 109 GSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGSKSGRTSKKI-VITDCGQ 163 (165)
T ss_dssp CSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCCSSCE-EEEEEEE
T ss_pred ccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCCCcE-EEEEeEE
Confidence 999999999999999999999999999995 566777 7777775
No 2
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=100.00 E-value=9.8e-43 Score=299.14 Aligned_cols=144 Identities=58% Similarity=1.007 Sum_probs=128.4
Q ss_pred CceEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCC
Q psy13279 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNR 80 (287)
Q Consensus 1 ~d~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 80 (287)
|||+|.+|+.|+|+||||++.||+||+||++||++++||+|+++.||||+|+|
T Consensus 15 ~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f--------------------------- 67 (172)
T 2cmt_A 15 FDIRIGNGDAGRIVMELRSDIVPRTAENFRALCTGERGFGYHNCCFHRVIPQF--------------------------- 67 (172)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTT---------------------------
T ss_pred EEEEECCeecceEEEEEcCCCCCHHHHHHHHHhccCCCceECCCEEEEEECCC---------------------------
Confidence 68999999999999999999999999999999988789889999999999999
Q ss_pred ccCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceeccccCC
Q psy13279 81 TRHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSMANSGP 160 (287)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~ 160 (287)
|||+||+...
T Consensus 68 -----------------------------------~iQgGd~~~~----------------------------------- 77 (172)
T 2cmt_A 68 -----------------------------------MCQGGDFVKG----------------------------------- 77 (172)
T ss_dssp -----------------------------------EEEECCTTTS-----------------------------------
T ss_pred -----------------------------------EEEcCCccCC-----------------------------------
Confidence 8999887642
Q ss_pred CCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhhhhhcCCCCC
Q psy13279 161 NTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLSMANSGPNTN 240 (287)
Q Consensus 161 ~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~lsMA~~~p~s~ 240 (287)
+|+++.++|+.+|++|+..++|+++|+|||||++|+++
T Consensus 78 ------------------------------------------~G~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~ 115 (172)
T 2cmt_A 78 ------------------------------------------DGTGGKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTN 115 (172)
T ss_dssp ------------------------------------------SSSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCB
T ss_pred ------------------------------------------CCCCCCccCCCcccccccCcccCCceEEEEeeCCCCCc
Confidence 33445566777788888888999999999999999999
Q ss_pred CceEEEEcCCCCCCCCCccEEEEeeecccc------------ccceeeeeeecCCC
Q psy13279 241 GSQFFLCTTKQEICVKLLDLLASLDAGWET------------RGVWKCHQWNGCGE 284 (287)
Q Consensus 241 ~SQFFIt~g~~~~LD~~ytVfG~VieG~dv------------~~~~~~~~~~~~ge 284 (287)
+||||||++++||||++|||||+|++|||| +|+.+| .|..||+
T Consensus 116 gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~~~~~P~~~v-~I~~~g~ 170 (172)
T 2cmt_A 116 GSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGSKSGKVKEPV-IISRCGE 170 (172)
T ss_dssp CSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCCTTCCCSSCE-EEEEEEE
T ss_pred ccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCCCCE-EEEEeEe
Confidence 999999999999999999999999999995 566777 7777775
No 3
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=100.00 E-value=1e-42 Score=299.40 Aligned_cols=144 Identities=67% Similarity=1.132 Sum_probs=129.1
Q ss_pred CceEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCC
Q psy13279 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNR 80 (287)
Q Consensus 1 ~d~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 80 (287)
|||+|.+|++|+|+||||.+.||+||+||++||+|++||+|+++.||||+|+|
T Consensus 16 ~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f--------------------------- 68 (173)
T 2r99_A 16 MDIKIGNKPAGRIQMLLRSDVVPMTAENFRCLCTHEKGFGFKGSSFHRIIPQF--------------------------- 68 (173)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBEEEEETTT---------------------------
T ss_pred EEEEECCccceeEEEEECCCCCcHHHHHHHHHhcccCCceecCCEEEEeeCCC---------------------------
Confidence 68999999999999999999999999999999998899889999999999999
Q ss_pred ccCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceeccccCC
Q psy13279 81 TRHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSMANSGP 160 (287)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~ 160 (287)
|||+||+...
T Consensus 69 -----------------------------------~iQgGd~~~~----------------------------------- 78 (173)
T 2r99_A 69 -----------------------------------MCQGGDFTNH----------------------------------- 78 (173)
T ss_dssp -----------------------------------EEEECCTTTS-----------------------------------
T ss_pred -----------------------------------EEEeCCcCCC-----------------------------------
Confidence 8999887642
Q ss_pred CCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhhhhhcCCCCC
Q psy13279 161 NTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLSMANSGPNTN 240 (287)
Q Consensus 161 ~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~lsMA~~~p~s~ 240 (287)
+|+++.++|+.+|.+|+..++|+++|+|||||++||++
T Consensus 79 ------------------------------------------~g~gg~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~ 116 (173)
T 2r99_A 79 ------------------------------------------NGTGGKSIYGKKFDDENFILKHTGPGLLSMANSGPNTN 116 (173)
T ss_dssp ------------------------------------------SSSCCCBTTBSCBCCCCCCSCCCSSSEEEECCSSTTCB
T ss_pred ------------------------------------------CCCCCCccCCCcccCcccCcccCCCcEEEEccCCCCCc
Confidence 33445566777788888888999999999999999999
Q ss_pred CceEEEEcCCCCCCCCCccEEEEeeecccc------------ccceeeeeeecCCC
Q psy13279 241 GSQFFLCTTKQEICVKLLDLLASLDAGWET------------RGVWKCHQWNGCGE 284 (287)
Q Consensus 241 ~SQFFIt~g~~~~LD~~ytVfG~VieG~dv------------~~~~~~~~~~~~ge 284 (287)
+||||||++++||||++|||||+|++|||| +|+.+| .|..||+
T Consensus 117 gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~P~~~v-~I~~cG~ 171 (173)
T 2r99_A 117 GSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQGSKDGKPKQKV-IIADCGE 171 (173)
T ss_dssp CSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSSCE-EEEEEEE
T ss_pred ccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCCCCCCCCCCe-EEEEeee
Confidence 999999999999999999999999999994 567777 7888876
No 4
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=100.00 E-value=1.2e-42 Score=298.49 Aligned_cols=143 Identities=52% Similarity=0.790 Sum_probs=128.8
Q ss_pred CceEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCC
Q psy13279 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNR 80 (287)
Q Consensus 1 ~d~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 80 (287)
|||+|++|++|+|+||||++.||+||+||++||+|+++|+|+++.||||+|+|
T Consensus 16 ~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f--------------------------- 68 (172)
T 2haq_A 16 FDVMIDSEPLGRITIGLFGKDAPLTTENFRQLCTGEHGFGYKDSIFHRVIQNF--------------------------- 68 (172)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCCSTTCBCCEEETTT---------------------------
T ss_pred EEEEECCEecceEEEEEeCCCCcHHHHHHHHHhccCCCcccCCCEEEEEECCC---------------------------
Confidence 69999999999999999999999999999999999999999999999999999
Q ss_pred ccCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceeccccCC
Q psy13279 81 TRHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSMANSGP 160 (287)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~ 160 (287)
|||+||+...
T Consensus 69 -----------------------------------~iQgGd~~~~----------------------------------- 78 (172)
T 2haq_A 69 -----------------------------------MIQGGDFTNF----------------------------------- 78 (172)
T ss_dssp -----------------------------------EEEECCTTTS-----------------------------------
T ss_pred -----------------------------------EEecCCccCC-----------------------------------
Confidence 8999886542
Q ss_pred CCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhhhhhcCCCCC
Q psy13279 161 NTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLSMANSGPNTN 240 (287)
Q Consensus 161 ~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~lsMA~~~p~s~ 240 (287)
+|+++.|+||++|++|+..++|. +|+|||||.+|+++
T Consensus 79 ------------------------------------------~g~gg~si~g~~f~dE~~~l~h~-~G~lsmAn~gp~tn 115 (172)
T 2haq_A 79 ------------------------------------------DGTGGKSIYGEKFADENLNVKHF-VGALSMANAGPNTN 115 (172)
T ss_dssp ------------------------------------------SSSCCCCSSSSCBCCCCCCSCCC-TTEEEECCSSTTCB
T ss_pred ------------------------------------------CCCCCccccCCcccCcCCCcccC-ceEEEEccCCCCCc
Confidence 33445567777888888888999 99999999999999
Q ss_pred CceEEEEcCCCCCCCCCccEEEEeeecccc-------------ccceeeeeeecCCC
Q psy13279 241 GSQFFLCTTKQEICVKLLDLLASLDAGWET-------------RGVWKCHQWNGCGE 284 (287)
Q Consensus 241 ~SQFFIt~g~~~~LD~~ytVfG~VieG~dv-------------~~~~~~~~~~~~ge 284 (287)
+||||||++++||||++|||||+|++|||| +|+.+| .|..||+
T Consensus 116 gSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v-~I~~~g~ 171 (172)
T 2haq_A 116 GSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTKTNSHDRPVKPV-KIVASGE 171 (172)
T ss_dssp CSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCE-EEEEEEE
T ss_pred ccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCCcCCCCcCCCCe-EEEEeEE
Confidence 999999999999999999999999999994 677777 7777775
No 5
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=100.00 E-value=2.9e-42 Score=297.61 Aligned_cols=143 Identities=48% Similarity=0.825 Sum_probs=126.8
Q ss_pred CceEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCC---------ceecCceeEEeccCccccccccccccccccccc
Q psy13279 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKG---------FGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFR 71 (287)
Q Consensus 1 ~d~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g---------~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~ 71 (287)
|||+|.+|++|+|+||||.+.||+||+||++||+++++ | |+++.||||+|+|
T Consensus 11 ~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~~~~g~~~~-Y~g~~FhRvi~~f------------------ 71 (177)
T 1a58_A 11 LDVTIDGNLAGRIVMELYNDIAPRTCNNFLMLCTGMAGTGKISGKPLH-YKGSTFHRVIKNF------------------ 71 (177)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBCC-CTTCBEEEEETTT------------------
T ss_pred EEEEECCEeceeEEEEEcCCCCchHHHHHHHHhcCCcCcccccCCcce-eCCCEEEEEECCC------------------
Confidence 69999999999999999999999999999999986432 7 9999999999999
Q ss_pred cccccCCCCccCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCC
Q psy13279 72 FDFAAGGNRTRHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPG 151 (287)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G 151 (287)
|||+||+...
T Consensus 72 --------------------------------------------~iQgGd~~~~-------------------------- 81 (177)
T 1a58_A 72 --------------------------------------------MIQGGDFTKG-------------------------- 81 (177)
T ss_dssp --------------------------------------------EEEECCCSSS--------------------------
T ss_pred --------------------------------------------EEEeCCccCC--------------------------
Confidence 8998887542
Q ss_pred ceeccccCCCCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhh
Q psy13279 152 VLSMANSGPNTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLS 231 (287)
Q Consensus 152 ~l~ma~~~~~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~ls 231 (287)
+|+++.++|+.+|.+|+..++|+++|+||
T Consensus 82 ---------------------------------------------------~g~gg~si~g~~f~dE~~~~~h~~~G~ls 110 (177)
T 1a58_A 82 ---------------------------------------------------DGTGGESIYGGMFDDEEFVMKHDEPFVVS 110 (177)
T ss_dssp ---------------------------------------------------SSSCCCCTTSSCBCCCCCCSCCCSSSEEE
T ss_pred ---------------------------------------------------CCCCCCcccCCcccCcccCcccCCCeEEE
Confidence 33445567777788888888999999999
Q ss_pred hhhcCCCCCCceEEEEcCCCCCCCCCccEEEEeeecccc-------------ccceeeeeeecCCC
Q psy13279 232 MANSGPNTNGSQFFLCTTKQEICVKLLDLLASLDAGWET-------------RGVWKCHQWNGCGE 284 (287)
Q Consensus 232 MA~~~p~s~~SQFFIt~g~~~~LD~~ytVfG~VieG~dv-------------~~~~~~~~~~~~ge 284 (287)
|||++|++++||||||++++||||++|||||+|++|||| +|+.+| .|..||+
T Consensus 111 mAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v-~I~~~G~ 175 (177)
T 1a58_A 111 MANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLKTNSKNRPLADV-VILNCGE 175 (177)
T ss_dssp ECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCE-EEEEEEE
T ss_pred EeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCCCCCCCcCCCCe-EEEEeEE
Confidence 999999999999999999999999999999999999994 567777 7888876
No 6
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=100.00 E-value=3.2e-42 Score=297.76 Aligned_cols=143 Identities=45% Similarity=0.755 Sum_probs=126.9
Q ss_pred CceEECceEeeEEEEEEeCCCChHHHHHHHHHHccC---------CCceecCceeEEeccCccccccccccccccccccc
Q psy13279 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHE---------KGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFR 71 (287)
Q Consensus 1 ~d~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~---------~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~ 71 (287)
|||+|.+|++|+|+||||++.||+||+||++||+|+ .+| |+++.||||+|+|
T Consensus 14 ~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~~-Y~g~~FhRvi~~f------------------ 74 (179)
T 2wfi_A 14 FDIAINNQPAGRVVFELFSDVCPKTCENFRCLCTGEKGTGKSTQKPLH-YKSCLFHRVVKDF------------------ 74 (179)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSC-CTTCBEEEEETTT------------------
T ss_pred EEEEECCccceEEEEEEcCCCCChHHHHHHHHhcCCcCcccccccCCe-ECCCEEEEEECCC------------------
Confidence 699999999999999999999999999999999865 457 9999999999999
Q ss_pred cccccCCCCccCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCC
Q psy13279 72 FDFAAGGNRTRHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPG 151 (287)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G 151 (287)
|||+||+...
T Consensus 75 --------------------------------------------~iQgGd~~~~-------------------------- 84 (179)
T 2wfi_A 75 --------------------------------------------MVQGGDFSEG-------------------------- 84 (179)
T ss_dssp --------------------------------------------EEEECCTTTS--------------------------
T ss_pred --------------------------------------------EEEcccccCC--------------------------
Confidence 8999887542
Q ss_pred ceeccccCCCCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhh
Q psy13279 152 VLSMANSGPNTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLS 231 (287)
Q Consensus 152 ~l~ma~~~~~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~ls 231 (287)
+|+++.|||+..|++|++.++|+++|+||
T Consensus 85 ---------------------------------------------------~g~gg~si~g~~f~dE~~~~~h~~~G~ls 113 (179)
T 2wfi_A 85 ---------------------------------------------------NGRGGESIYGGFFEDESFAVKHNKEFLLS 113 (179)
T ss_dssp ---------------------------------------------------SSSCCCCTTSSCBCCCCCCSCCCSTTEEE
T ss_pred ---------------------------------------------------CCCCCCcccCCcccccccCcCcCCCeEEE
Confidence 33445567777788888888999999999
Q ss_pred hhhcCCCCCCceEEEEcCCCCCCCCCccEEEEeeecccc-------------ccceeeeeeecCCC
Q psy13279 232 MANSGPNTNGSQFFLCTTKQEICVKLLDLLASLDAGWET-------------RGVWKCHQWNGCGE 284 (287)
Q Consensus 232 MA~~~p~s~~SQFFIt~g~~~~LD~~ytVfG~VieG~dv-------------~~~~~~~~~~~~ge 284 (287)
|||.+|++++||||||++++||||++|||||+|++|||| +|+.+| .|..||+
T Consensus 114 MAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v-~I~~~G~ 178 (179)
T 2wfi_A 114 MANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQKTDAASKPFAEV-RILSCGE 178 (179)
T ss_dssp ECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCCBCTTSCBSSCE-EEEEEEE
T ss_pred EEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCCCCCCCCCCCCe-EEEeCee
Confidence 999999999999999999999999999999999999994 567777 7788875
No 7
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=100.00 E-value=3.5e-42 Score=293.68 Aligned_cols=144 Identities=51% Similarity=0.835 Sum_probs=129.1
Q ss_pred CceEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCC
Q psy13279 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNR 80 (287)
Q Consensus 1 ~d~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 80 (287)
|||+|.+|++|+|+||||++.||+||+||++||+|+++|+|+++.||||+|+|
T Consensus 7 ~di~i~~t~~G~i~ieL~~~~aP~t~~nF~~L~~g~~g~~Y~g~~fhRvi~~f--------------------------- 59 (164)
T 3pmp_A 7 FNISINDKPEGRIVFKLYDEAVPKTAKNFRELATGQHGFGYKDSIFHRVIPQF--------------------------- 59 (164)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBEEEEETTT---------------------------
T ss_pred EEEEECCEEeeEEEEEEeCCCCcHHHHHHHHHhcccCCCcccCCEEEEEECCC---------------------------
Confidence 79999999999999999999999999999999988899999999999999999
Q ss_pred ccCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceeccccCC
Q psy13279 81 TRHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSMANSGP 160 (287)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~ 160 (287)
|+|+||+...
T Consensus 60 -----------------------------------~iQgGd~~~~----------------------------------- 69 (164)
T 3pmp_A 60 -----------------------------------MLQGGDFTRH----------------------------------- 69 (164)
T ss_dssp -----------------------------------EEEECCTTTS-----------------------------------
T ss_pred -----------------------------------eEEeCCCCCC-----------------------------------
Confidence 8999886542
Q ss_pred CCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhhhhhcCCCCC
Q psy13279 161 NTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLSMANSGPNTN 240 (287)
Q Consensus 161 ~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~lsMA~~~p~s~ 240 (287)
+++++.++|+.+|.+|+..++|+++|+|||||.+|+++
T Consensus 70 ------------------------------------------~g~gg~si~g~~~~dE~~~l~h~~~G~lsma~~g~~t~ 107 (164)
T 3pmp_A 70 ------------------------------------------NGTGGKSIYGEKFADENFQVKHTKPGLLSMANAGANTN 107 (164)
T ss_dssp ------------------------------------------SSSCCCBTTBSCBCCCCCCSCCCSTTEEEECBSSTTCB
T ss_pred ------------------------------------------CCCCCcccCCccccccccccCcCCCcEEEEeeCCCCCc
Confidence 33455667777888888889999999999999999999
Q ss_pred CceEEEEcCCCCCCCCCccEEEEeeecccc------------ccceeeeeeecCCC
Q psy13279 241 GSQFFLCTTKQEICVKLLDLLASLDAGWET------------RGVWKCHQWNGCGE 284 (287)
Q Consensus 241 ~SQFFIt~g~~~~LD~~ytVfG~VieG~dv------------~~~~~~~~~~~~ge 284 (287)
+||||||++++||||++|||||||++|||| +|..+| .|..||+
T Consensus 108 ~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~~~~~P~~~v-~I~~cg~ 162 (164)
T 3pmp_A 108 GSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGSASGKTNATI-KITDCGT 162 (164)
T ss_dssp CSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSSCE-EEEEEEE
T ss_pred ccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCCCCCCcccCE-EEEeCeE
Confidence 999999999999999999999999999995 566677 7777775
No 8
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=100.00 E-value=3.2e-42 Score=296.25 Aligned_cols=144 Identities=59% Similarity=1.002 Sum_probs=127.6
Q ss_pred CceEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCce-------ecCceeEEeccCccccccccccccccccccccc
Q psy13279 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFG-------YQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFD 73 (287)
Q Consensus 1 ~d~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~-------Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~ 73 (287)
||++|.+|++|+|+||||.+.||+||+||++||++++|++ |+++.||||+|+|
T Consensus 8 ~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~g~~~~~~~Y~g~~FhRvi~~f-------------------- 67 (173)
T 2igv_A 8 FDITIGGKASGRIVMELYDDVVPKTAGNFRALCTGENGIGKSGKPLHFKGSKFHRIIPNF-------------------- 67 (173)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTT--------------------
T ss_pred EEEEECCEecceEEEEEeCCCCcHHHHHHHHHhcCCCCCCccCccceECCCEEEEEECCC--------------------
Confidence 6999999999999999999999999999999998877732 9999999999999
Q ss_pred cccCCCCccCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCce
Q psy13279 74 FAAGGNRTRHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVL 153 (287)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l 153 (287)
|||+||+...
T Consensus 68 ------------------------------------------~iQgGd~~~~---------------------------- 77 (173)
T 2igv_A 68 ------------------------------------------MIQGGDFTRG---------------------------- 77 (173)
T ss_dssp ------------------------------------------EEEECCTTTS----------------------------
T ss_pred ------------------------------------------EEEcCCCCCC----------------------------
Confidence 8999887542
Q ss_pred eccccCCCCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhhhh
Q psy13279 154 SMANSGPNTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLSMA 233 (287)
Q Consensus 154 ~ma~~~~~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~lsMA 233 (287)
+|+++.+||+.+|++|+..++|+++|+||||
T Consensus 78 -------------------------------------------------~G~gg~siyg~~f~dE~~~l~h~~~G~lsmA 108 (173)
T 2igv_A 78 -------------------------------------------------NGTGGESIYGEKFPDENFKEKHTGPGVLSMA 108 (173)
T ss_dssp -------------------------------------------------SSSCCCBTTBSCBCCCCCCSCCCSTTEEEEC
T ss_pred -------------------------------------------------CCCCCCccCCCcccCcccccCCCCCeEEEEe
Confidence 3344556677778888888899999999999
Q ss_pred hcCCCCCCceEEEEcCCCCCCCCCccEEEEeeecccc------------ccceeeeeeecCCC
Q psy13279 234 NSGPNTNGSQFFLCTTKQEICVKLLDLLASLDAGWET------------RGVWKCHQWNGCGE 284 (287)
Q Consensus 234 ~~~p~s~~SQFFIt~g~~~~LD~~ytVfG~VieG~dv------------~~~~~~~~~~~~ge 284 (287)
|++|++++||||||++++||||++|||||+|++|||| +|+.+| .|..||+
T Consensus 109 n~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~~~v-~I~~~g~ 170 (173)
T 2igv_A 109 NAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGSQSGKPVKDC-MIADCGQ 170 (173)
T ss_dssp CSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCSSCE-EEEEEEE
T ss_pred eCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCCCCCCCCCCE-EEEEeEE
Confidence 9999999999999999999999999999999999995 567777 7788875
No 9
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=100.00 E-value=4e-42 Score=298.60 Aligned_cols=144 Identities=53% Similarity=0.833 Sum_probs=128.3
Q ss_pred CceEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCce-------ecCceeEEeccCccccccccccccccccccccc
Q psy13279 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFG-------YQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFD 73 (287)
Q Consensus 1 ~d~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~-------Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~ 73 (287)
|||+|.+|+.|+|+||||++.||+||+||++||++++||+ |+++.||||+|+|
T Consensus 24 ~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~~~~Y~g~~FhRVi~~f-------------------- 83 (186)
T 2poy_A 24 FDISIGQTPAGRITMELFADKVPITAENFRALCTGEKGMGQSGKPLCYTGSFFHRIIPQF-------------------- 83 (186)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTCBCTTSSBSCCTTCBCCEEETTT--------------------
T ss_pred EEEeECCEecccEEEEEeCCCCcHHHHHHHHHhcccCCccccCccceECCCEEEEEeCCC--------------------
Confidence 6899999999999999999999999999999998888886 9999999999999
Q ss_pred cccCCCCccCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCce
Q psy13279 74 FAAGGNRTRHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVL 153 (287)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l 153 (287)
|||+||+...
T Consensus 84 ------------------------------------------~iQgGd~~~~---------------------------- 93 (186)
T 2poy_A 84 ------------------------------------------MIQGGDFTRG---------------------------- 93 (186)
T ss_dssp ------------------------------------------EEEECCTTTS----------------------------
T ss_pred ------------------------------------------EEEeCCCCCC----------------------------
Confidence 8999887542
Q ss_pred eccccCCCCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhhhh
Q psy13279 154 SMANSGPNTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLSMA 233 (287)
Q Consensus 154 ~ma~~~~~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~lsMA 233 (287)
+|+++.|||+.+|++|+..++|+++|+||||
T Consensus 94 -------------------------------------------------~G~gg~si~g~~f~dE~~~l~h~~~G~lsMA 124 (186)
T 2poy_A 94 -------------------------------------------------DGTGGESIYGSKFRDENFVYTHDAPFLLSMA 124 (186)
T ss_dssp -------------------------------------------------SSSCCCCTTC-CBCCCCCCSCCCSTTEEEEC
T ss_pred -------------------------------------------------CCCCCCccCCCcccCcccccccCCCcEEEEe
Confidence 3344556677778888888899999999999
Q ss_pred hcCCCCCCceEEEEcCCCCCCCCCccEEEEeeecccc------------ccceeeeeeecCCC
Q psy13279 234 NSGPNTNGSQFFLCTTKQEICVKLLDLLASLDAGWET------------RGVWKCHQWNGCGE 284 (287)
Q Consensus 234 ~~~p~s~~SQFFIt~g~~~~LD~~ytVfG~VieG~dv------------~~~~~~~~~~~~ge 284 (287)
|.+||+++||||||++++||||++|||||+|++|||| +|+.+| .|..|||
T Consensus 125 n~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~P~~~v-~I~~cG~ 186 (186)
T 2poy_A 125 NAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGSQNGKPTKSV-CITASGV 186 (186)
T ss_dssp CSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCCTTSCCSSCE-EEEEEEC
T ss_pred eCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCCCCCCCCCCE-EEEeCCC
Confidence 9999999999999999999999999999999999995 577778 8888875
No 10
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=5.7e-42 Score=298.22 Aligned_cols=144 Identities=50% Similarity=0.839 Sum_probs=128.6
Q ss_pred CceEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCC
Q psy13279 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNR 80 (287)
Q Consensus 1 ~d~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 80 (287)
|||+|.+|++|+|+||||.+.||+||+||++||+|++||+|+++.||||+|+|
T Consensus 20 ~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~FhRvi~~f--------------------------- 72 (188)
T 3ich_A 20 FDLRIGDEDVGRVIFGLFGKTVPKTVDNFVALATGEKGFGYKNSKFHRVIKDF--------------------------- 72 (188)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTTTSCSSTTCBCCEEETTT---------------------------
T ss_pred EEEEECCEeceeEEEEEcCCCCcHHHHHHHHHhcccCCccccCCEEEEEECCC---------------------------
Confidence 68999999999999999999999999999999998899999999999999999
Q ss_pred ccCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceeccccCC
Q psy13279 81 TRHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSMANSGP 160 (287)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~ 160 (287)
|||+||+...
T Consensus 73 -----------------------------------~iQgGd~~~~----------------------------------- 82 (188)
T 3ich_A 73 -----------------------------------MIQGGDFTRG----------------------------------- 82 (188)
T ss_dssp -----------------------------------EEEECCTTTS-----------------------------------
T ss_pred -----------------------------------EEEcCCccCC-----------------------------------
Confidence 8999886542
Q ss_pred CCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhhhhhcCCCCC
Q psy13279 161 NTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLSMANSGPNTN 240 (287)
Q Consensus 161 ~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~lsMA~~~p~s~ 240 (287)
+|+++.||||.+|.+|+..++|+++|+|||||.+|+++
T Consensus 83 ------------------------------------------~g~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tn 120 (188)
T 3ich_A 83 ------------------------------------------DGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTN 120 (188)
T ss_dssp ------------------------------------------SSSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCB
T ss_pred ------------------------------------------CCCCCccccCCcccccccCcccCCCeEEEEccCCCCCc
Confidence 33445567777788888888999999999999999999
Q ss_pred CceEEEEcCCCCCCCCCccEEEEeeecccc-------------ccceeeeeeecCCC
Q psy13279 241 GSQFFLCTTKQEICVKLLDLLASLDAGWET-------------RGVWKCHQWNGCGE 284 (287)
Q Consensus 241 ~SQFFIt~g~~~~LD~~ytVfG~VieG~dv-------------~~~~~~~~~~~~ge 284 (287)
+||||||++++||||++|||||+|++|||| +|+.+| .|..|++
T Consensus 121 gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~~~~P~~~v-~I~~~~~ 176 (188)
T 3ich_A 121 GSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTKTDSRDKPLKDV-IIADCGK 176 (188)
T ss_dssp CSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCE-EEEEEEE
T ss_pred ccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCeECCCE-EEEEeEE
Confidence 999999999999999999999999999994 566777 7777764
No 11
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=100.00 E-value=6e-42 Score=293.82 Aligned_cols=143 Identities=50% Similarity=0.833 Sum_probs=126.6
Q ss_pred CceEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCce-------ecCceeEEeccCccccccccccccccccccccc
Q psy13279 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFG-------YQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFD 73 (287)
Q Consensus 1 ~d~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~-------Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~ 73 (287)
|||+|.+|++|+|+||||.+.||+||+||++||+++ +|+ |+++.||||+|+|
T Consensus 8 ~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~-g~g~~~~~~~Y~g~~FhRvi~~f-------------------- 66 (170)
T 1qng_A 8 FDISIDNSNAGRIIFELFSDITPRTCENFRALCTGE-KIGSRGKNLHYKNSIFHRIIPQF-------------------- 66 (170)
T ss_dssp EEEEESSSEEEEEEEEECTTTCHHHHHHHHHHHHTC-EECTTSSEECCTTCBCCEEETTT--------------------
T ss_pred EEEeECCEeceeEEEEEcCCCCCHHHHHHHHHhccC-CcCccCccceECCCEEEEEECCC--------------------
Confidence 699999999999999999999999999999999654 665 9999999999999
Q ss_pred cccCCCCccCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCce
Q psy13279 74 FAAGGNRTRHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVL 153 (287)
Q Consensus 74 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l 153 (287)
|||+||+...
T Consensus 67 ------------------------------------------~iQgGd~~~~---------------------------- 76 (170)
T 1qng_A 67 ------------------------------------------MCQGGDITNG---------------------------- 76 (170)
T ss_dssp ------------------------------------------EEEECCTTTS----------------------------
T ss_pred ------------------------------------------EEEcCCccCC----------------------------
Confidence 8999887542
Q ss_pred eccccCCCCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhhhh
Q psy13279 154 SMANSGPNTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLSMA 233 (287)
Q Consensus 154 ~ma~~~~~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~lsMA 233 (287)
+|+++.+||+++|++|+..++|+++|+||||
T Consensus 77 -------------------------------------------------~g~gg~si~g~~f~dE~~~l~h~~~G~lsmA 107 (170)
T 1qng_A 77 -------------------------------------------------NGSGGESIYGRSFTDENFNMKHDQPGLLSMA 107 (170)
T ss_dssp -------------------------------------------------SSSCCCBTTBSCBCCCCCCSCCCSTTEEEEC
T ss_pred -------------------------------------------------CCCCCccccCCcccccccccccCCCCEEEEe
Confidence 3344556777778888888899999999999
Q ss_pred hcCCCCCCceEEEEcCCCCCCCCCccEEEEeeecccc------------ccceeeeeeecCCC
Q psy13279 234 NSGPNTNGSQFFLCTTKQEICVKLLDLLASLDAGWET------------RGVWKCHQWNGCGE 284 (287)
Q Consensus 234 ~~~p~s~~SQFFIt~g~~~~LD~~ytVfG~VieG~dv------------~~~~~~~~~~~~ge 284 (287)
|.+|++++||||||++++||||++|||||+|++|||| +|+.+| .|..||+
T Consensus 108 n~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t~~~~P~~~v-~I~~cG~ 169 (170)
T 1qng_A 108 NAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGAKSGYVKRSV-VITDCGE 169 (170)
T ss_dssp CSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCSSCE-EEEEEEE
T ss_pred ecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCCCCCCCCCCe-EEEecee
Confidence 9999999999999999999999999999999999995 567777 7777775
No 12
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=100.00 E-value=1.6e-41 Score=296.22 Aligned_cols=143 Identities=48% Similarity=0.799 Sum_probs=126.6
Q ss_pred CceEECceEeeEEEEEEeCCCChHHHHHHHHHHccC---------CCceecCceeEEeccCccccccccccccccccccc
Q psy13279 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHE---------KGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFR 71 (287)
Q Consensus 1 ~d~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~---------~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~ 71 (287)
|||+|.+|++|+|+||||++.||+||+||++||+|+ .+| |+++.||||+|+|
T Consensus 24 ~di~i~~t~~G~I~ieL~~~~aP~t~~NF~~L~~g~~g~~~~~~k~~~-Y~g~~FhRVi~~f------------------ 84 (192)
T 2he9_A 24 FDIEINREPVGRIMFQLFSDICPKTCKNFLCLCSGEKGLGKTTGKKLC-YKGSTFHRVVKNF------------------ 84 (192)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTCSBSC-CTTCBEEEEETTT------------------
T ss_pred EEEEECCEecceEEEEEcCCCCchHHHHHHHHhcCCCCcccccccCCe-ECCCEEEEEECCC------------------
Confidence 699999999999999999999999999999999865 457 9999999999999
Q ss_pred cccccCCCCccCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCC
Q psy13279 72 FDFAAGGNRTRHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPG 151 (287)
Q Consensus 72 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G 151 (287)
|||+||+...
T Consensus 85 --------------------------------------------miQgGd~~~~-------------------------- 94 (192)
T 2he9_A 85 --------------------------------------------MIQGGDFSEG-------------------------- 94 (192)
T ss_dssp --------------------------------------------EEEECCTTTS--------------------------
T ss_pred --------------------------------------------EEEcCcccCC--------------------------
Confidence 8999887542
Q ss_pred ceeccccCCCCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhh
Q psy13279 152 VLSMANSGPNTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLS 231 (287)
Q Consensus 152 ~l~ma~~~~~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~ls 231 (287)
+|+++.+|||..|++|++.++|+++|+||
T Consensus 95 ---------------------------------------------------~G~gg~siyg~~f~dE~~~l~h~~~G~ls 123 (192)
T 2he9_A 95 ---------------------------------------------------NGKGGESIYGGYFKDENFILKHDRAFLLS 123 (192)
T ss_dssp ---------------------------------------------------SSSCCCCTTSSCBCCCCCCSCCCSTTEEE
T ss_pred ---------------------------------------------------CCCCCCcccCCcccCccccCCCCCCeEEE
Confidence 33445567777788888888999999999
Q ss_pred hhhcCCCCCCceEEEEcCCCCCCCCCccEEEEeeecccc-------------ccceeeeeeecCCC
Q psy13279 232 MANSGPNTNGSQFFLCTTKQEICVKLLDLLASLDAGWET-------------RGVWKCHQWNGCGE 284 (287)
Q Consensus 232 MA~~~p~s~~SQFFIt~g~~~~LD~~ytVfG~VieG~dv-------------~~~~~~~~~~~~ge 284 (287)
|||.+|++|+||||||++++||||++|||||+|++|||| +|+.+| .|..||+
T Consensus 124 MAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~~~~P~~~v-~I~~~g~ 188 (192)
T 2he9_A 124 MANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLKTDAASRPYADV-RVIDCGV 188 (192)
T ss_dssp ECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCE-EEEEEEE
T ss_pred EEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCCcCCCCCCcCCe-EEEEeEE
Confidence 999999999999999999999999999999999999994 566777 7777775
No 13
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=100.00 E-value=4.3e-41 Score=291.82 Aligned_cols=144 Identities=61% Similarity=1.042 Sum_probs=129.1
Q ss_pred CceEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCC
Q psy13279 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNR 80 (287)
Q Consensus 1 ~d~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 80 (287)
||++|+++++|+|+||||++.||+||+||++||++++||+|+++.||||+|+|
T Consensus 27 ~di~i~~~~~G~I~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f--------------------------- 79 (184)
T 3rdd_A 27 FDIAVDGEPLGRVSFELFADKVPKTAENFRALSTGEKGFGYKGSCFHRIIPGF--------------------------- 79 (184)
T ss_dssp EEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCSSTTCBCCEEETTT---------------------------
T ss_pred EEEeECCEeeeEEEEEEeCCCCcHHHHHHHHHhccCcCcccCCCEEEEccCCc---------------------------
Confidence 68999999999999999999999999999999999899999999999999999
Q ss_pred ccCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceeccccCC
Q psy13279 81 TRHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSMANSGP 160 (287)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~ 160 (287)
|||+||+...
T Consensus 80 -----------------------------------~iQgGd~~~~----------------------------------- 89 (184)
T 3rdd_A 80 -----------------------------------MCQGGDFTRH----------------------------------- 89 (184)
T ss_dssp -----------------------------------EEEECCTTTS-----------------------------------
T ss_pred -----------------------------------EEEeCCCCCC-----------------------------------
Confidence 8999886542
Q ss_pred CCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhhhhhcCCCCC
Q psy13279 161 NTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLSMANSGPNTN 240 (287)
Q Consensus 161 ~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~lsMA~~~p~s~ 240 (287)
+|.++.++|+..|.+|++.++|+++|+|||||.+|+++
T Consensus 90 ------------------------------------------~g~gg~si~g~~~~de~~~l~h~~~G~lsmA~~gp~s~ 127 (184)
T 3rdd_A 90 ------------------------------------------NGTGGKSIYGEKFEDENFILKHTGPGILSMANAGPNTN 127 (184)
T ss_dssp ------------------------------------------SSSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCB
T ss_pred ------------------------------------------CCCCCcccCCCcccCcccccccCCCcEEEEEeCCCCCc
Confidence 23445566777788888888999999999999999999
Q ss_pred CceEEEEcCCCCCCCCCccEEEEeeecccc------------ccceeeeeeecCCC
Q psy13279 241 GSQFFLCTTKQEICVKLLDLLASLDAGWET------------RGVWKCHQWNGCGE 284 (287)
Q Consensus 241 ~SQFFIt~g~~~~LD~~ytVfG~VieG~dv------------~~~~~~~~~~~~ge 284 (287)
+||||||++++|+||++|||||+|++|||| +|..+| .|..||+
T Consensus 128 gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~~~g~P~~~v-~I~~cG~ 182 (184)
T 3rdd_A 128 GSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGSRNGKTSKKI-TIADCGQ 182 (184)
T ss_dssp SSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTSCCSSCE-EEEEEEE
T ss_pred ccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCCCCCCCcCCe-EEEeCeE
Confidence 999999999999999999999999999995 566777 8888875
No 14
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=100.00 E-value=4.4e-41 Score=290.15 Aligned_cols=144 Identities=51% Similarity=0.832 Sum_probs=125.6
Q ss_pred CceEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCC-----ceecCceeEEeccCccccccccccccccccccccccc
Q psy13279 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKG-----FGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFA 75 (287)
Q Consensus 1 ~d~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g-----~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~ 75 (287)
||++|.+|++|+|+||||.+.||+||+||++||+++.+ ++|+++.||||+|+|
T Consensus 15 ~di~i~~t~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~g~~~~Y~g~~FhRvi~~f---------------------- 72 (177)
T 1mzw_A 15 FDVSIGGQEVGRMKIELFADVVPKTAENFRQFCTGEFRKDGVPIGYKGSTFHRVIKDF---------------------- 72 (177)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCEETTEECSSTTCBCCEEETTT----------------------
T ss_pred EEEEECCeeceeEEEEEcCCCCcHHHHHHHHHHhcccCCcCccceECCCEEEEEECCC----------------------
Confidence 68999999999999999999999999999999955442 139999999999999
Q ss_pred cCCCCccCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceec
Q psy13279 76 AGGNRTRHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSM 155 (287)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~m 155 (287)
|||+||+...
T Consensus 73 ----------------------------------------~iQgGd~~~~------------------------------ 82 (177)
T 1mzw_A 73 ----------------------------------------MIQGGDFVNG------------------------------ 82 (177)
T ss_dssp ----------------------------------------EEEECCTTTS------------------------------
T ss_pred ----------------------------------------EEEcCCcccC------------------------------
Confidence 8999887542
Q ss_pred cccCCCCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhhhhhc
Q psy13279 156 ANSGPNTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLSMANS 235 (287)
Q Consensus 156 a~~~~~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~lsMA~~ 235 (287)
+|+++.+|||++|++|+..++|+++|+|||||+
T Consensus 83 -----------------------------------------------~G~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~ 115 (177)
T 1mzw_A 83 -----------------------------------------------DGTGVASIYRGPFADENFKLRHSAPGLLSMANS 115 (177)
T ss_dssp -----------------------------------------------SSCCCCCTTSSCBCCCCCCSCCCSTTEEEECCS
T ss_pred -----------------------------------------------CCCCCCccCCCcccCcccccccCCCCEEEEccC
Confidence 334455677777888888889999999999999
Q ss_pred CCCCCCceEEEEcCCCCCCCCCccEEEEeeecccc-------------ccceeeeeeecCCC
Q psy13279 236 GPNTNGSQFFLCTTKQEICVKLLDLLASLDAGWET-------------RGVWKCHQWNGCGE 284 (287)
Q Consensus 236 ~p~s~~SQFFIt~g~~~~LD~~ytVfG~VieG~dv-------------~~~~~~~~~~~~ge 284 (287)
+|++++||||||++++||||++|||||+|++|||| +|..+| .|..||+
T Consensus 116 gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v-~I~~cG~ 176 (177)
T 1mzw_A 116 GPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVPTGPNNKPKLPV-VISQCGE 176 (177)
T ss_dssp STTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCGGGCBSSCE-EEEEEEE
T ss_pred CCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCCCCCE-EEEecee
Confidence 99999999999999999999999999999999994 567777 7777775
No 15
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=100.00 E-value=7.8e-41 Score=290.54 Aligned_cols=144 Identities=50% Similarity=0.850 Sum_probs=127.7
Q ss_pred CceEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCC
Q psy13279 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNR 80 (287)
Q Consensus 1 ~d~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 80 (287)
|||.|.++++|+|+||||.+.||+||+||++||++++|++|+|+.||||+|+|
T Consensus 17 ~di~i~~~~~G~i~ieL~~~~aP~t~~NF~~L~~~~~g~~Y~g~~FhRvi~~f--------------------------- 69 (185)
T 4fru_A 17 FDLRIGDEDIGRVVIGLFGKTVPKTVDNFVALATGEKGFGYKDSKFHRVIKDF--------------------------- 69 (185)
T ss_dssp EEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHTTTSCCSTTCBCCEEETTT---------------------------
T ss_pred EEEEECCEecceEEEEEeCCCCcHHHHHHHHHHhcCCCCeEcCCEEEEeeCCC---------------------------
Confidence 69999999999999999999999999999999988778449999999999999
Q ss_pred ccCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceeccccCC
Q psy13279 81 TRHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSMANSGP 160 (287)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~ 160 (287)
|||+||+...
T Consensus 70 -----------------------------------~iQgGd~~~~----------------------------------- 79 (185)
T 4fru_A 70 -----------------------------------MIQGGDFTRG----------------------------------- 79 (185)
T ss_dssp -----------------------------------EEEECCTTTS-----------------------------------
T ss_pred -----------------------------------eEEECCCCCC-----------------------------------
Confidence 8999887542
Q ss_pred CCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhhhhhcCCCCC
Q psy13279 161 NTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLSMANSGPNTN 240 (287)
Q Consensus 161 ~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~lsMA~~~p~s~ 240 (287)
+|.++.++|+..|++|+..++|+++|+|||||.+|+++
T Consensus 80 ------------------------------------------~g~gg~si~g~~f~de~~~~~h~~~G~lsma~~gp~t~ 117 (185)
T 4fru_A 80 ------------------------------------------DGTGGKSIYGERFPDENFKLKHYGPGWVSMANAGKDTN 117 (185)
T ss_dssp ------------------------------------------SSSCCCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCB
T ss_pred ------------------------------------------CCCCCccccCCccCccccccCcCCCeEEEEeeCCCCCc
Confidence 34455667777888888889999999999999999999
Q ss_pred CceEEEEcCCCCCCCCCccEEEEeeecccc-------------ccceeeeeeecCCC
Q psy13279 241 GSQFFLCTTKQEICVKLLDLLASLDAGWET-------------RGVWKCHQWNGCGE 284 (287)
Q Consensus 241 ~SQFFIt~g~~~~LD~~ytVfG~VieG~dv-------------~~~~~~~~~~~~ge 284 (287)
+||||||++++||||++|||||||++|||| +|+.+| .|..||+
T Consensus 118 ~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~t~~~~~P~~~v-~I~~~g~ 173 (185)
T 4fru_A 118 GSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTKTDGRDKPLKDV-TIADCGK 173 (185)
T ss_dssp CSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSCBCTTSCBSSCE-EEEEEEE
T ss_pred ceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCCCCCCCcCCCCE-EEEEceE
Confidence 999999999999999999999999999995 566677 7777764
No 16
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=100.00 E-value=1.1e-40 Score=291.12 Aligned_cols=144 Identities=50% Similarity=0.882 Sum_probs=128.7
Q ss_pred CceEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCC
Q psy13279 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNR 80 (287)
Q Consensus 1 ~d~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~ 80 (287)
|||+|++|++|+|+||||++.||+||+||++||+++++|+|+++.||||+|+|
T Consensus 32 ~di~i~~t~~G~I~ieL~~~~aP~tv~NF~~L~~g~~g~~Y~g~~FhRvi~~f--------------------------- 84 (193)
T 3k2c_A 32 FDVYANEESLGRIVMKLEDDIVPKTAKNFRTLCERPKGEGYKGSTFHRIIPGF--------------------------- 84 (193)
T ss_dssp EEEEETTEEEEEEEEEECTTTSHHHHHHHHHHHHSCTTSSSTTCBEEEEETTT---------------------------
T ss_pred EEEeECCEEeeEEEEEEcCCCChHHHHHHHHHhccccCCcccCCEEEEEeCCC---------------------------
Confidence 69999999999999999999999999999999988799999999999999999
Q ss_pred ccCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceeccccCC
Q psy13279 81 TRHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSMANSGP 160 (287)
Q Consensus 81 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~ 160 (287)
|+|+||+...
T Consensus 85 -----------------------------------~iQgGd~~~~----------------------------------- 94 (193)
T 3k2c_A 85 -----------------------------------MVQGGDYTAH----------------------------------- 94 (193)
T ss_dssp -----------------------------------EEEECCTTTS-----------------------------------
T ss_pred -----------------------------------EEEeCCCCCC-----------------------------------
Confidence 8998886542
Q ss_pred CCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhhhhhcCCCCC
Q psy13279 161 NTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLSMANSGPNTN 240 (287)
Q Consensus 161 ~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~lsMA~~~p~s~ 240 (287)
+++++.++|+..|++|++.++|+++|+|||||.+|+++
T Consensus 95 ------------------------------------------~g~gg~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~t~ 132 (193)
T 3k2c_A 95 ------------------------------------------NGTGGRSIYGEKFPDENFELKHTKEGILSMANCGAHTN 132 (193)
T ss_dssp ------------------------------------------SSSCCCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCB
T ss_pred ------------------------------------------CCcCCcccCCCcccccccccccCCCcEEEEEeCCCCCC
Confidence 33455667777888888889999999999999999999
Q ss_pred CceEEEEcCCCCCCCCCccEEEEeeecccc------------ccc--eeeeeeecCCC
Q psy13279 241 GSQFFLCTTKQEICVKLLDLLASLDAGWET------------RGV--WKCHQWNGCGE 284 (287)
Q Consensus 241 ~SQFFIt~g~~~~LD~~ytVfG~VieG~dv------------~~~--~~~~~~~~~ge 284 (287)
+||||||++++||||++|||||+|++|||| +|. .+| .|..||+
T Consensus 133 gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t~~g~P~~~~~v-~I~~cG~ 189 (193)
T 3k2c_A 133 GSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGSESGQVKKGYRI-EIRDCGV 189 (193)
T ss_dssp CSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCCTTCCCCTTCCE-EEEEEEE
T ss_pred ccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCCCCCcCccCccE-EEEEceE
Confidence 999999999999999999999999999995 455 667 7788775
No 17
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=100.00 E-value=4.2e-41 Score=289.05 Aligned_cols=144 Identities=49% Similarity=0.814 Sum_probs=103.7
Q ss_pred CceEEC-----ceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccc
Q psy13279 1 MDIKIG-----KQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFA 75 (287)
Q Consensus 1 ~d~~i~-----~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~ 75 (287)
|||+|. .|++|+|+||||++.||+||+||++||+|++||+|+++.||||+|+|
T Consensus 7 ~di~i~~~~~~~T~~G~i~ieL~~~~aP~t~~NF~~L~~g~~g~~Y~g~~fhRvi~~f---------------------- 64 (172)
T 2c3b_A 7 FDVEYAPVGTAETKVGRIVFNLFDKDVPKTAKNFRELCKRPAGEGYRESTFHRIIPNF---------------------- 64 (172)
T ss_dssp EEEEECCTTCSCCEEEEEEEEECTTTSHHHHHHHHHHHHSCTTTSSTTCBCCEEETTT----------------------
T ss_pred EEEEeCCCCceecccccEEEEEcCCCCcHHHHHHHHHhccCCCcccCCCEEEEEeCCC----------------------
Confidence 688887 46779999999999999999999999988899999999999999999
Q ss_pred cCCCCccCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceec
Q psy13279 76 AGGNRTRHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSM 155 (287)
Q Consensus 76 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~m 155 (287)
|+|+||+...
T Consensus 65 ----------------------------------------~iQgGd~~~~------------------------------ 74 (172)
T 2c3b_A 65 ----------------------------------------MIQGGDFTRG------------------------------ 74 (172)
T ss_dssp ----------------------------------------EEEECC----------------------------------
T ss_pred ----------------------------------------EEEeCCcCCC------------------------------
Confidence 8999885432
Q ss_pred cccCCCCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhhhhhc
Q psy13279 156 ANSGPNTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLSMANS 235 (287)
Q Consensus 156 a~~~~~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~lsMA~~ 235 (287)
+|+++.|||+++|++|+..++|+++|+|||||+
T Consensus 75 -----------------------------------------------~g~gg~si~g~~f~dE~~~~~h~~~G~lsmA~~ 107 (172)
T 2c3b_A 75 -----------------------------------------------NGTGGRSIYGDKFADENFSRKHDKKGILSMANA 107 (172)
T ss_dssp -----------------------------------------------------------------CHHHHHTCEEEEC--
T ss_pred -----------------------------------------------CCCCCcccCCCcccCcccccccCCCeEEEEeeC
Confidence 234455677777888888889999999999999
Q ss_pred CCCCCCceEEEEcCCCCCCCCCccEEEEeee--cccc--------------ccceeeeeeecCCC
Q psy13279 236 GPNTNGSQFFLCTTKQEICVKLLDLLASLDA--GWET--------------RGVWKCHQWNGCGE 284 (287)
Q Consensus 236 ~p~s~~SQFFIt~g~~~~LD~~ytVfG~Vie--G~dv--------------~~~~~~~~~~~~ge 284 (287)
+|++++||||||++++||||++|||||+|++ |||| +|..+| .|..||+
T Consensus 108 gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t~~~~~~P~~~v-~I~~cG~ 171 (172)
T 2c3b_A 108 GPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGSSSGSVRSNTRP-KIVNCGE 171 (172)
T ss_dssp -------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCCTTSCCCSSSCC-EEEEEEE
T ss_pred CCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCCCCCCccCCCCe-EEEeCee
Confidence 9999999999999999999999999999999 9994 566777 7777775
No 18
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=7.4e-40 Score=292.20 Aligned_cols=143 Identities=47% Similarity=0.755 Sum_probs=125.1
Q ss_pred CceEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCC------ceecCceeEEeccCcccccccccccccccccccccc
Q psy13279 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKG------FGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDF 74 (287)
Q Consensus 1 ~d~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g------~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~ 74 (287)
||+.|.+|++|+|+||||.+.||+||+||++||+++++ + |+++.||||||+|
T Consensus 64 ~disi~~t~~G~I~ieL~~d~aP~tv~NF~~L~~~~~g~~g~~~~-Y~gt~FHRVi~~F--------------------- 121 (229)
T 1z81_A 64 MDINLGNNFLGKFKFELFQNIVPKTSENFRQFCTGEYKVNNLPVG-YKNTIFHRVIKEF--------------------- 121 (229)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHTCCBSSSSBCS-STTEECCEEETTT---------------------
T ss_pred EEEeECCeecccEEEEEcCCCCCHHHHHHHHHhhCCCCCcCCCce-ECCCEEEEEeCCC---------------------
Confidence 68999999999999999999999999999999976543 5 9999999999999
Q ss_pred ccCCCCccCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCcee
Q psy13279 75 AAGGNRTRHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLS 154 (287)
Q Consensus 75 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ 154 (287)
|||+||+...
T Consensus 122 -----------------------------------------miQgGD~~~g----------------------------- 131 (229)
T 1z81_A 122 -----------------------------------------MIQGGDFINH----------------------------- 131 (229)
T ss_dssp -----------------------------------------EEEECCTTTS-----------------------------
T ss_pred -----------------------------------------EEEcCCCcCC-----------------------------
Confidence 8999887542
Q ss_pred ccccCCCCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhhhhh
Q psy13279 155 MANSGPNTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLSMAN 234 (287)
Q Consensus 155 ma~~~~~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~lsMA~ 234 (287)
+|+++.+||+.+|++|+..++|+++|+|||||
T Consensus 132 ------------------------------------------------~G~Gg~siyg~~f~dE~~~l~h~~~G~LsMAn 163 (229)
T 1z81_A 132 ------------------------------------------------NGSGSLSIYGEKFDDENFDIKHDKEGLLSMAN 163 (229)
T ss_dssp ------------------------------------------------SSCCCCBTTBSCCCCCCCCSCCCSTTEEEECC
T ss_pred ------------------------------------------------CCCCCCccCCCcccccccccccCCCcEEEecc
Confidence 33445567777788888888999999999999
Q ss_pred cCCCCCCceEEEEcCCCCCCCCCccEEEEee--ecccc--------------ccceeeeeeecCCC
Q psy13279 235 SGPNTNGSQFFLCTTKQEICVKLLDLLASLD--AGWET--------------RGVWKCHQWNGCGE 284 (287)
Q Consensus 235 ~~p~s~~SQFFIt~g~~~~LD~~ytVfG~Vi--eG~dv--------------~~~~~~~~~~~~ge 284 (287)
++|++++||||||++++||||++|||||||+ +|||| +|+.+| .|..||+
T Consensus 164 ~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~t~~~~~~P~~~V-~I~~cG~ 228 (229)
T 1z81_A 164 SGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVSVTPYIYKPKIPI-NVVECGE 228 (229)
T ss_dssp SSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSCBCTTTCCBSSCE-EEEEEEE
T ss_pred CCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCCCCCCCCCCCCCe-EEEeCee
Confidence 9999999999999999999999999999999 99994 455667 7777775
No 19
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=100.00 E-value=3.7e-39 Score=273.91 Aligned_cols=125 Identities=42% Similarity=0.645 Sum_probs=112.2
Q ss_pred eEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCCcc
Q psy13279 3 IKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNRTR 82 (287)
Q Consensus 3 ~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 82 (287)
..+++|++|+|+||||++.||+||+||++|| +++| |+++.||||+|+|
T Consensus 7 ~v~~~T~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~fhRvi~~f----------------------------- 54 (160)
T 2fu0_A 7 SAIIYTTMGDIHISLFYKECKKTVQNFSVHS--INGY-YNNCIFHRVIKHF----------------------------- 54 (160)
T ss_dssp EEEEEETTEEEEEEECTTTCHHHHHHHHHHH--HTTT-TTTCBCCEEETTT-----------------------------
T ss_pred EEEEEecCccEEEEEeCCCChHHHHHHHHHh--ccCc-cCCCEEEEEECCC-----------------------------
Confidence 4677999999999999999999999999999 8999 9999999999999
Q ss_pred CCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceeccccCCCC
Q psy13279 83 HSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSMANSGPNT 162 (287)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s 162 (287)
|||+||+..
T Consensus 55 ---------------------------------~iQgGd~~~-------------------------------------- 63 (160)
T 2fu0_A 55 ---------------------------------MVQTGDPSG-------------------------------------- 63 (160)
T ss_dssp ---------------------------------EEEECCTTS--------------------------------------
T ss_pred ---------------------------------EEEeCCcCC--------------------------------------
Confidence 899988642
Q ss_pred CCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCccccccc-ccccCchhhhhhhhcCCCCCC
Q psy13279 163 NGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENF-ILKHTGPGVLSMANSGPNTNG 241 (287)
Q Consensus 163 ~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~-~~~h~~~G~lsMA~~~p~s~~ 241 (287)
+|+++.++||.+|++|+. .++|+++|+|||||.+|++++
T Consensus 64 ----------------------------------------~g~gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~~ 103 (160)
T 2fu0_A 64 ----------------------------------------DGTGGESIWGNEFEDEFFDHLNHSKPFMVSMANCGPNTNG 103 (160)
T ss_dssp ----------------------------------------SSSCCCCTTSSCBCCCCBTTBCSSSSSEEEECCSSTTCBC
T ss_pred ----------------------------------------CCCCCCcccCCCccccccCCcccCCceEEEEecCCCCCcc
Confidence 233445677777888876 588888999999999999999
Q ss_pred ceEEEEcCCCCCCCCCccEEEEeeecccc
Q psy13279 242 SQFFLCTTKQEICVKLLDLLASLDAGWET 270 (287)
Q Consensus 242 SQFFIt~g~~~~LD~~ytVfG~VieG~dv 270 (287)
||||||++++||||++|||||+|++||||
T Consensus 104 SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dv 132 (160)
T 2fu0_A 104 SQFFITTVPCPWLDFKHTVFGKVTQGSKI 132 (160)
T ss_dssp SCEEEESSCCGGGTTTSCEEEEEEECHHH
T ss_pred cEEEEECCCCCccCCCcEEEEEEEcCHHH
Confidence 99999999999999999999999999996
No 20
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=100.00 E-value=5e-39 Score=274.67 Aligned_cols=125 Identities=43% Similarity=0.714 Sum_probs=111.9
Q ss_pred eEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCCcc
Q psy13279 3 IKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNRTR 82 (287)
Q Consensus 3 ~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 82 (287)
..++.|++|+|+||||++.||+||+||++|| +++| |+++.||||+|+|
T Consensus 13 ~v~l~t~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~fhRvi~~f----------------------------- 60 (166)
T 2x7k_A 13 NVYLETSMGIIVLELYWKHAPKTCKNFAELA--RRGY-YNGTKFHRIIKDF----------------------------- 60 (166)
T ss_dssp EEEEEETTEEEEEEECTTTCHHHHHHHHHHH--HHTT-TTTEECCEEETTT-----------------------------
T ss_pred EEEEEeCCCcEEEEEccCCCCHHHHHHHHHH--hcCC-CCCCEEEEEECCC-----------------------------
Confidence 4567899999999999999999999999999 8999 9999999999999
Q ss_pred CCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceeccccCCCC
Q psy13279 83 HSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSMANSGPNT 162 (287)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s 162 (287)
|+|+||+..
T Consensus 61 ---------------------------------~iQgGd~~~-------------------------------------- 69 (166)
T 2x7k_A 61 ---------------------------------MIQGGDPTG-------------------------------------- 69 (166)
T ss_dssp ---------------------------------EEEECCTTS--------------------------------------
T ss_pred ---------------------------------EEEcCCCCC--------------------------------------
Confidence 899988653
Q ss_pred CCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccc-cccccCchhhhhhhhcCCCCCC
Q psy13279 163 NGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDEN-FILKHTGPGVLSMANSGPNTNG 241 (287)
Q Consensus 163 ~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~-~~~~h~~~G~lsMA~~~p~s~~ 241 (287)
+|.++.++|+..|++|. ..++|.++|+|||||.+|++++
T Consensus 70 ----------------------------------------~g~gg~si~g~~~~dE~~~~l~h~~~G~lsmAn~gp~s~g 109 (166)
T 2x7k_A 70 ----------------------------------------TGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNG 109 (166)
T ss_dssp ----------------------------------------SSSCCCCTTSSCBCCCCCTTSCCCSTTEEEECBSSTTCBC
T ss_pred ----------------------------------------CCCCCCccCCCccccccccccCCCCCeEEEEeeCCCCCcc
Confidence 23345566777788886 4788889999999999999999
Q ss_pred ceEEEEcCCCCCCCCCccEEEEeeecccc
Q psy13279 242 SQFFLCTTKQEICVKLLDLLASLDAGWET 270 (287)
Q Consensus 242 SQFFIt~g~~~~LD~~ytVfG~VieG~dv 270 (287)
||||||++++||||++|||||+|++||||
T Consensus 110 SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dv 138 (166)
T 2x7k_A 110 SQFFVTLAPTQWLDGKHTIFGRVCQGIGM 138 (166)
T ss_dssp SCEEEESSCCGGGTTTSCEEEEEEECHHH
T ss_pred ceEEEECCCCCccCCCeeEEEEEEcCHHH
Confidence 99999999999999999999999999996
No 21
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=100.00 E-value=7.5e-39 Score=277.90 Aligned_cols=125 Identities=39% Similarity=0.653 Sum_probs=109.5
Q ss_pred ceEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCCc
Q psy13279 2 DIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNRT 81 (287)
Q Consensus 2 d~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 81 (287)
++.+ .|++|+|+||||++.||+||+||++|| +++| |+++.||||+|+|
T Consensus 18 ~v~i-~t~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~FhRvi~~f---------------------------- 65 (185)
T 2poe_A 18 GVRI-ITNYGDLKFELFCSQCPKACKNFLALS--ASGY-YKNTIFHKNIKGF---------------------------- 65 (185)
T ss_dssp EEEE-EETTEEEEEEECTTTCHHHHHHHHHHH--HTTT-TTTEEEEEECTTS----------------------------
T ss_pred EEEE-EecCccEEEEEeCCCCcHHHHHHHHHh--ccCC-CCCCEEEEEECCC----------------------------
Confidence 3444 499999999999999999999999999 8999 9999999999999
Q ss_pred cCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceeccccCCC
Q psy13279 82 RHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSMANSGPN 161 (287)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~ 161 (287)
|||+||+..
T Consensus 66 ----------------------------------~iQgGd~~~------------------------------------- 74 (185)
T 2poe_A 66 ----------------------------------IIQGGDPTG------------------------------------- 74 (185)
T ss_dssp ----------------------------------EEEEEETTS-------------------------------------
T ss_pred ----------------------------------EEEcCCCCC-------------------------------------
Confidence 888887642
Q ss_pred CCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccc-cccccCchhhhhhhhcC----
Q psy13279 162 TNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDEN-FILKHTGPGVLSMANSG---- 236 (287)
Q Consensus 162 s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~-~~~~h~~~G~lsMA~~~---- 236 (287)
+|+++.++||.+|++|+ ..++|+++|+|||||++
T Consensus 75 -----------------------------------------~g~gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~g~~~~ 113 (185)
T 2poe_A 75 -----------------------------------------TGKGGESIYGRYFDDEIYPELKYDRRGILSMASKGASKK 113 (185)
T ss_dssp -----------------------------------------SSSCCCBTTBSCBCCCCCTTSCCCSTTEEEECCSCC-CC
T ss_pred -----------------------------------------CCCCCCccCCCcccccccCCCccCCCeEEEEecCCCCCC
Confidence 23344556677777776 67788889999999998
Q ss_pred CCCCCceEEEEcCCCCCCCCCccEEEEeeecccc
Q psy13279 237 PNTNGSQFFLCTTKQEICVKLLDLLASLDAGWET 270 (287)
Q Consensus 237 p~s~~SQFFIt~g~~~~LD~~ytVfG~VieG~dv 270 (287)
|++++||||||++++||||++|||||+|++||||
T Consensus 114 p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdv 147 (185)
T 2poe_A 114 PNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFET 147 (185)
T ss_dssp CSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH
T ss_pred CCCccceEEEECCCCCccCCCeeEEEEEeCCHHH
Confidence 9999999999999999999999999999999995
No 22
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=100.00 E-value=1.9e-38 Score=269.90 Aligned_cols=123 Identities=47% Similarity=0.726 Sum_probs=109.9
Q ss_pred ECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCCccCC
Q psy13279 5 IGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNRTRHS 84 (287)
Q Consensus 5 i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~ 84 (287)
+.+|++|+|+||||++.||+||+||++|| +.+| |+++.||||+|+|
T Consensus 4 ~~~T~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~fhRvi~~f------------------------------- 49 (161)
T 2ok3_A 4 TLHTDVGDIKIEVFCERTPKTCENFLALC--ASNY-YNGCIFHRNIKGF------------------------------- 49 (161)
T ss_dssp EEEETTEEEEEEECTTTCHHHHHHHHHHH--HTTT-TTTCBCCEEETTT-------------------------------
T ss_pred EEEeCCccEEEEEcCCCCcHHHHHHHHHh--hhcc-cCCCEEEEEECCC-------------------------------
Confidence 44699999999999999999999999999 8899 9999999999999
Q ss_pred CCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceeccccCCCCCC
Q psy13279 85 FPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSMANSGPNTNG 164 (287)
Q Consensus 85 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~~ 164 (287)
|+|+||+..
T Consensus 50 -------------------------------~iQgGd~~~---------------------------------------- 58 (161)
T 2ok3_A 50 -------------------------------MVQTGDPTG---------------------------------------- 58 (161)
T ss_dssp -------------------------------EEEECCTTS----------------------------------------
T ss_pred -------------------------------EEecCCCCC----------------------------------------
Confidence 899888653
Q ss_pred CceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCccccccc-ccccCchhhhhhhhcCCCCCCce
Q psy13279 165 SQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENF-ILKHTGPGVLSMANSGPNTNGSQ 243 (287)
Q Consensus 165 SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~-~~~h~~~G~lsMA~~~p~s~~SQ 243 (287)
+|+++.++|+.+|++|.. .++|+++|+|||||.+|++++||
T Consensus 59 --------------------------------------~g~gg~si~g~~~~dE~~~~l~h~~~G~lsma~~gp~s~~SQ 100 (161)
T 2ok3_A 59 --------------------------------------TGRGGNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQ 100 (161)
T ss_dssp --------------------------------------SSSCCCCTTSSCBCCCCCTTCCSCSTTEEEECCSSTTCBCSC
T ss_pred --------------------------------------CCCCCCcccCCccccccCcCcCcCCCeEEEEecCCCCCcceE
Confidence 223445667777888864 67898999999999999999999
Q ss_pred EEEEcCCCCCCCCCccEEEEeeecccc
Q psy13279 244 FFLCTTKQEICVKLLDLLASLDAGWET 270 (287)
Q Consensus 244 FFIt~g~~~~LD~~ytVfG~VieG~dv 270 (287)
||||++++||||++|||||+|++||||
T Consensus 101 FfI~~~~~~~Ldg~~tvFG~Vv~G~dv 127 (161)
T 2ok3_A 101 FFITYGKQPHLDMKYTVFGKVIDGLET 127 (161)
T ss_dssp EEEESSCCGGGTTTSCEEEEEEECHHH
T ss_pred EEEEcCCCCccCCCEeEEEEEeCCHHH
Confidence 999999999999999999999999996
No 23
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=1.6e-38 Score=273.88 Aligned_cols=126 Identities=42% Similarity=0.646 Sum_probs=113.4
Q ss_pred ceEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCCc
Q psy13279 2 DIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNRT 81 (287)
Q Consensus 2 d~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~ 81 (287)
+..+++|++|+|+||||.+.||+||+||++|| +.+| |+++.||||+|+|
T Consensus 22 ~~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~FhRvi~~f---------------------------- 70 (176)
T 2a2n_A 22 DSAIIHTSMGDIHTKLFPVECPKTVENFCVHS--RNGY-YNGHTFHRIIKGF---------------------------- 70 (176)
T ss_dssp SEEEEEETTEEEEEEECTTTCHHHHHHHHHHH--HTTT-TTTCBCCEEETTT----------------------------
T ss_pred CEEEEEecCccEEEEEeCCCChHHHHHHHHHh--hcCc-cCCCEEEEEECCc----------------------------
Confidence 46788999999999999999999999999999 8999 9999999999999
Q ss_pred cCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceeccccCCC
Q psy13279 82 RHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSMANSGPN 161 (287)
Q Consensus 82 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~ 161 (287)
|||+||+..
T Consensus 71 ----------------------------------~iQgGd~~~------------------------------------- 79 (176)
T 2a2n_A 71 ----------------------------------MIQTGDPTG------------------------------------- 79 (176)
T ss_dssp ----------------------------------EEEECCTTS-------------------------------------
T ss_pred ----------------------------------EEEccCCCC-------------------------------------
Confidence 899888642
Q ss_pred CCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCccccccc-ccccCchhhhhhhhcCCCCC
Q psy13279 162 TNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENF-ILKHTGPGVLSMANSGPNTN 240 (287)
Q Consensus 162 s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~-~~~h~~~G~lsMA~~~p~s~ 240 (287)
+|+++.++||.+|++|+. .++|+++|+|||||.+|+++
T Consensus 80 -----------------------------------------~g~gg~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~ 118 (176)
T 2a2n_A 80 -----------------------------------------TGMGGESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTN 118 (176)
T ss_dssp -----------------------------------------SSSCCCCTTSSCBCCCCCTTCCSCSSSEEEECCSSTTCB
T ss_pred -----------------------------------------CCCCCCcccCCccccccccccccCCceEEEEEeCCCCCc
Confidence 233455677777888876 58888899999999999999
Q ss_pred CceEEEEcCCCCCCCCCccEEEEeeecccc
Q psy13279 241 GSQFFLCTTKQEICVKLLDLLASLDAGWET 270 (287)
Q Consensus 241 ~SQFFIt~g~~~~LD~~ytVfG~VieG~dv 270 (287)
+||||||++++||||++|||||+|++||||
T Consensus 119 gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdv 148 (176)
T 2a2n_A 119 GSQFFITVVPTPWLDNKHTVFGRVTKGMEV 148 (176)
T ss_dssp CSCEEEESSCCGGGTTTSCEEEEEEECHHH
T ss_pred ccEEEEECCCCCccCCCeeEEEEEeCCHHH
Confidence 999999999999999999999999999996
No 24
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=100.00 E-value=9.7e-39 Score=286.35 Aligned_cols=146 Identities=25% Similarity=0.430 Sum_probs=119.4
Q ss_pred CceEECceEeeEEEEEEeCCCChHHHHHHHHHHccC-----------C----C--ceecCceeEEeccCccccccccccc
Q psy13279 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHE-----------K----G--FGYQGSSFHRIIPDFVSFMTKRQSL 63 (287)
Q Consensus 1 ~d~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~-----------~----g--~~Y~g~~f~rvi~~~~~~~g~~~~~ 63 (287)
|||+|.+|++|+|+||||.+.||+||+||++||+++ + | |+|+|+.|||||++|
T Consensus 19 ~di~i~~t~~G~I~ieL~~d~aP~tv~NF~~L~~g~~~~~~p~~~~~~~~~~G~~~~Y~gt~FHRVi~~F---------- 88 (234)
T 2ose_A 19 MDIVLNNEIIGRLQIKLFRDAFPAGVENFVQLTNGKTYRVNSNGTGKYKYNRHINRTYEGCKFHNVLHNN---------- 88 (234)
T ss_dssp EEEEETTEEEEEEEEEECGGGCHHHHHHHHHHHHTCCCC---------------CCCSTTCBCCEEETTT----------
T ss_pred EEEEECCcccceEEEEEcCCCCcHHHHHHHHHhcCCccccccccccccccccCCceEECCcEEEEEECCC----------
Confidence 689999999999999999999999999999999876 4 5 779999999999999
Q ss_pred cccccccccccccCCCCccCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcc-cccCc
Q psy13279 64 KSRFSKFRFDFAAGGNRTRHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNK-FEDEN 142 (287)
Q Consensus 64 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~-~~~e~ 142 (287)
||||||+...+|+|+.++|+.. ++.|
T Consensus 89 ----------------------------------------------------miQgGd~~~g~G~Gg~siyg~~~~p~~- 115 (234)
T 2ose_A 89 ----------------------------------------------------YIVSGDIYNSNGSSAGTVYCDEPIPPV- 115 (234)
T ss_dssp ----------------------------------------------------EEEECCCC----CCCCCTTTTCCBCCC-
T ss_pred ----------------------------------------------------EEEcCCccCCCCCCCccccCCccCccc-
Confidence 9999997766777766555443 1000
Q ss_pred ccccccCCCceeccccCCCCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCccccccccc
Q psy13279 143 FVLKHTGPGVLSMANSGPNTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFIL 222 (287)
Q Consensus 143 ~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~ 222 (287)
|+ ++.+
T Consensus 116 ------------------------------------------------------------------------f~--~~~l 121 (234)
T 2ose_A 116 ------------------------------------------------------------------------FG--DYFY 121 (234)
T ss_dssp ------------------------------------------------------------------------CC--SCCC
T ss_pred ------------------------------------------------------------------------cc--CcCc
Confidence 22 2357
Q ss_pred ccCchhhhhhhh----cCCCCCCceEEEEcCC------CCCCCCCccEEEEeeecccc-------------ccceeeeee
Q psy13279 223 KHTGPGVLSMAN----SGPNTNGSQFFLCTTK------QEICVKLLDLLASLDAGWET-------------RGVWKCHQW 279 (287)
Q Consensus 223 ~h~~~G~lsMA~----~~p~s~~SQFFIt~g~------~~~LD~~ytVfG~VieG~dv-------------~~~~~~~~~ 279 (287)
+|+++|+||||| .+|++++||||||+++ +||||++|||||+|++|||| +|+.+| .|
T Consensus 122 ~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~tVFG~Vv~GmdVv~~I~~~~t~~~~~P~~~V-~I 200 (234)
T 2ose_A 122 PHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQVVIGQVYGGLDVLDKINSMIKPYAGRKYPTF-SI 200 (234)
T ss_dssp CSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSEEEEEEEECHHHHHHHHHHTCCCTTCCCCCE-EE
T ss_pred cCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCeeEEEEEeCCHHHHHHHHhCCcCCCCCccCCE-EE
Confidence 888999999999 8899999999999999 99999999999999999995 566677 77
Q ss_pred ecCCC
Q psy13279 280 NGCGE 284 (287)
Q Consensus 280 ~~~ge 284 (287)
..|+.
T Consensus 201 ~~~~~ 205 (234)
T 2ose_A 201 GKCGA 205 (234)
T ss_dssp EEEEE
T ss_pred EEEEE
Confidence 77764
No 25
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=100.00 E-value=2.7e-38 Score=276.57 Aligned_cols=125 Identities=43% Similarity=0.724 Sum_probs=112.2
Q ss_pred eEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCCcc
Q psy13279 3 IKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNRTR 82 (287)
Q Consensus 3 ~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 82 (287)
..++.|++|+|+||||++.||+||+||++|| ++|| |+|+.||||+|+|
T Consensus 21 ~v~l~T~~G~I~ieL~~~~aP~tv~NF~~L~--~~g~-Ydg~~FhRVi~~f----------------------------- 68 (197)
T 1zkc_A 21 YVRLHTNKGDLNLELHCDLTPKTCENFIRLC--KKHY-YDGTIFHRSIRNF----------------------------- 68 (197)
T ss_dssp EEEEEETTEEEEEEECTTTSHHHHHHHHHHH--HTTT-TTTEEEEEEETTT-----------------------------
T ss_pred EEEEEeCCccEEEEEcCCCCcHHHHHHHHHH--hcCC-CCCCEEEEEeCCC-----------------------------
Confidence 4677999999999999999999999999999 8999 9999999999999
Q ss_pred CCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceeccccCCCC
Q psy13279 83 HSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSMANSGPNT 162 (287)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s 162 (287)
|||+||+..
T Consensus 69 ---------------------------------~iQgGd~~~-------------------------------------- 77 (197)
T 1zkc_A 69 ---------------------------------VIQGGDPTG-------------------------------------- 77 (197)
T ss_dssp ---------------------------------EEEECCTTS--------------------------------------
T ss_pred ---------------------------------EEEcCCCCC--------------------------------------
Confidence 899888643
Q ss_pred CCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCccccc-ccccccCchhhhhhhhcCCCCCC
Q psy13279 163 NGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDE-NFILKHTGPGVLSMANSGPNTNG 241 (287)
Q Consensus 163 ~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E-~~~~~h~~~G~lsMA~~~p~s~~ 241 (287)
+|.|+.++||.+|++| +..++|+++|+|||||.+|++++
T Consensus 78 ----------------------------------------~g~Gg~si~g~~f~dE~~~~l~h~~~G~lsMAn~gp~sng 117 (197)
T 1zkc_A 78 ----------------------------------------TGTGGESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNR 117 (197)
T ss_dssp ----------------------------------------SSSCCCBTTBSCBCCCCCTTCCSCSTTEEEECCSSTTCBC
T ss_pred ----------------------------------------CCCCCCccCCCccccccCcCcCCCCceEEEEecCCCCCcc
Confidence 2334556677778888 46788989999999999999999
Q ss_pred ceEEEEcCCCCCCCCCccEEEEeeecccc
Q psy13279 242 SQFFLCTTKQEICVKLLDLLASLDAGWET 270 (287)
Q Consensus 242 SQFFIt~g~~~~LD~~ytVfG~VieG~dv 270 (287)
||||||++++||||++|||||+|++||||
T Consensus 118 SQFFIt~~~~~~LDg~~tVFG~Vv~Gmdv 146 (197)
T 1zkc_A 118 SQFFITFRSCAYLDKKHTIFGRVVGGFDV 146 (197)
T ss_dssp SCEEEESSCCGGGTTTSCEEEEEEECHHH
T ss_pred cEEEEEcCCCCccCCCccEEEEEEcCHHH
Confidence 99999999999999999999999999995
No 26
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=100.00 E-value=2.6e-38 Score=276.60 Aligned_cols=124 Identities=44% Similarity=0.718 Sum_probs=111.1
Q ss_pred EECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCCccC
Q psy13279 4 KIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNRTRH 83 (287)
Q Consensus 4 ~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (287)
.++.|++|+|+||||++.||+||+||++|| ++|| |+|+.||||+|+|
T Consensus 41 V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~--~~g~-Y~g~~FhRVi~~f------------------------------ 87 (196)
T 2b71_A 41 ITIYTNLGDFEVELYWYHSPKTCLNFYTLC--EMGF-YDNTIFHRVIPNF------------------------------ 87 (196)
T ss_dssp EEEEETTEEEEEEECTTTSHHHHHHHHHHH--HTTT-TTTEEEEEEETTT------------------------------
T ss_pred EEEEeCCCCEEEEEeCCCCcHHHHHHHHHh--hcCC-cCCCEEEEEeCCc------------------------------
Confidence 567899999999999999999999999999 8999 9999999999999
Q ss_pred CCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceeccccCCCCC
Q psy13279 84 SFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSMANSGPNTN 163 (287)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~ 163 (287)
|||+||+..
T Consensus 88 --------------------------------~iQgGd~~~--------------------------------------- 96 (196)
T 2b71_A 88 --------------------------------VIQGGDPTG--------------------------------------- 96 (196)
T ss_dssp --------------------------------EEEEEETTS---------------------------------------
T ss_pred --------------------------------EEEcCCCCC---------------------------------------
Confidence 888887642
Q ss_pred CCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccc-cccccCchhhhhhhhcCCCCCCc
Q psy13279 164 GSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDEN-FILKHTGPGVLSMANSGPNTNGS 242 (287)
Q Consensus 164 ~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~-~~~~h~~~G~lsMA~~~p~s~~S 242 (287)
+|+++.++||.+|++|. ..++|+++|+|||||.+|++++|
T Consensus 97 ---------------------------------------~g~gg~si~g~~~~dE~~~~l~h~~~G~lsMAn~gpns~gS 137 (196)
T 2b71_A 97 ---------------------------------------TGKGGKSIYGEYFEDEINKELKHTGAGILSMSNNGPNTNSS 137 (196)
T ss_dssp ---------------------------------------SSSCCCBTTBSCBCCCCCTTCCCCSTTEEEECCSSTTCBSS
T ss_pred ---------------------------------------CCCCCCccCCCcccccccCCcCcCCCeEEEEccCCCCCccc
Confidence 23445566777788884 57889899999999999999999
Q ss_pred eEEEEcCCCCCCCCCccEEEEeeecccc
Q psy13279 243 QFFLCTTKQEICVKLLDLLASLDAGWET 270 (287)
Q Consensus 243 QFFIt~g~~~~LD~~ytVfG~VieG~dv 270 (287)
|||||++++||||++|||||+|++||||
T Consensus 138 QFFIt~~~~~~LDg~~tVFG~Vv~Gmdv 165 (196)
T 2b71_A 138 QFFITLAPLPHLDGKHTIFARVSKNMTC 165 (196)
T ss_dssp CEEEESSCCGGGTTTSCEEEEEEECHHH
T ss_pred EEEEECCCCCccCCCEeEEEEEecCHHH
Confidence 9999999999999999999999999995
No 27
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=100.00 E-value=8.4e-38 Score=295.82 Aligned_cols=131 Identities=55% Similarity=0.900 Sum_probs=118.1
Q ss_pred CceEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCc--------eecCceeEEeccCcccccccccccccccccccc
Q psy13279 1 MDIKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGF--------GYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRF 72 (287)
Q Consensus 1 ~d~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~--------~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~ 72 (287)
||+.|++++.|+|+||||++.||+||+||++||++++++ .|+|+.||||||+|
T Consensus 20 ~~~~~~~~~~G~i~~~l~~~~~P~t~~nf~~l~~~~~~~~~~~g~~~~y~~~~fhrv~~~f------------------- 80 (370)
T 1ihg_A 20 FDVDIGGERVGRIVLELFADIVPKTAENFRALCTGEKGIGPTTGKPLHFKGCPFHRIIKKF------------------- 80 (370)
T ss_dssp EEEEETTEEEEEEEEEECTTTCHHHHHHHHHHHHCTTCBCTTTSSBSCCTTCBEEEEETTT-------------------
T ss_pred EEEEECCEecccEEEEEcCCCCchHHHHHHHHcCCCcCcCccCCCcceeCCcEeEEEECCc-------------------
Confidence 689999999999999999999999999999999875542 29999999999999
Q ss_pred ccccCCCCccCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCc
Q psy13279 73 DFAAGGNRTRHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGV 152 (287)
Q Consensus 73 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~ 152 (287)
||||||++..
T Consensus 81 -------------------------------------------~~q~Gd~~~~--------------------------- 90 (370)
T 1ihg_A 81 -------------------------------------------MIQGGDFSNQ--------------------------- 90 (370)
T ss_dssp -------------------------------------------EEEECCTTTS---------------------------
T ss_pred -------------------------------------------EEECCCCCCC---------------------------
Confidence 8998887642
Q ss_pred eeccccCCCCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhhh
Q psy13279 153 LSMANSGPNTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLSM 232 (287)
Q Consensus 153 l~ma~~~~~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~lsM 232 (287)
+|+|+.+|||.+|.+|++.++|+++|+|||
T Consensus 91 --------------------------------------------------~g~g~~~~~~~~~~~e~~~~~~~~~g~l~m 120 (370)
T 1ihg_A 91 --------------------------------------------------NGTGGESIYGEKFEDENFHYKHDKEGLLSM 120 (370)
T ss_dssp --------------------------------------------------SSSCCCBTTBSCBCCCCCCBCCCSTTEEEE
T ss_pred --------------------------------------------------CCCCCCCCCCCCcCCCcCCcCCCCCeEEEE
Confidence 345566777888888888889999999999
Q ss_pred hhcCCCCCCceEEEEcCCCCCCCCCccEEEEeeecccc
Q psy13279 233 ANSGPNTNGSQFFLCTTKQEICVKLLDLLASLDAGWET 270 (287)
Q Consensus 233 A~~~p~s~~SQFFIt~g~~~~LD~~ytVfG~VieG~dv 270 (287)
||.+|+|++||||||++++||||++|||||+|++||+|
T Consensus 121 a~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v 158 (370)
T 1ihg_A 121 ANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGV 158 (370)
T ss_dssp CCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHH
T ss_pred eeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHH
Confidence 99999999999999999999999999999999999995
No 28
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=100.00 E-value=6.4e-38 Score=275.44 Aligned_cols=132 Identities=31% Similarity=0.445 Sum_probs=109.0
Q ss_pred eEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCCcc
Q psy13279 3 IKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNRTR 82 (287)
Q Consensus 3 ~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 82 (287)
..++.|+.|+|+||||++.||+||+||++|| +.|| |+|+.||||+|+|
T Consensus 8 ~v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Ydg~~FhRvi~~f----------------------------- 55 (201)
T 3bo7_A 8 YLRIVTTQGSLNIELHADMAPRACDSFLRLC--AVKY-FDDTIFHRCIRNF----------------------------- 55 (201)
T ss_dssp EEEEEETTEEEEEEECTTTCHHHHHHHHHHH--HTTT-TTTCBEEEEETTT-----------------------------
T ss_pred EEEEEeCCCCEEEEEcCCCCcHHHHHHHHHH--hcCc-cCCCEEEEeeCCC-----------------------------
Confidence 3567899999999999999999999999999 8999 9999999999999
Q ss_pred CCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeC-----CCCCCCCCCCccccCcccccCcccccccCCCceeccc
Q psy13279 83 HSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGG-----DFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSMAN 157 (287)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g-----~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ma~ 157 (287)
|||+| |+.. +|+|+.++|...
T Consensus 56 ---------------------------------~iQgG~~~~~Dp~~-~g~gg~si~~~~-------------------- 81 (201)
T 3bo7_A 56 ---------------------------------MIQGGRAELRQPSK-KKEVQQSPRSIS-------------------- 81 (201)
T ss_dssp ---------------------------------EEEECCGGGCCC--------CCSSCCC--------------------
T ss_pred ---------------------------------EEEcCcccccCCCC-CCCCCccccccc--------------------
Confidence 99999 7653 455544333110
Q ss_pred cCCCCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCccccc-ccccccCchhhhhhhhcC
Q psy13279 158 SGPNTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDE-NFILKHTGPGVLSMANSG 236 (287)
Q Consensus 158 ~~~~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E-~~~~~h~~~G~lsMA~~~ 236 (287)
+ + . .+.+|.+| +..++|+++|+|||||++
T Consensus 82 -------------------------------------~-~---------~---~g~~f~dE~~~~l~h~~~G~lsmA~~g 111 (201)
T 3bo7_A 82 -------------------------------------G-F---------P---GGAPFEDEFDNRLVHQGIGVLSMANDG 111 (201)
T ss_dssp -------------------------------------S-S---------T---TCCCBCCCCCTTCCCCSTTEEEECCSS
T ss_pred -------------------------------------c-c---------c---CCCcccCcccCCCCcCCCcEEEEeeCC
Confidence 0 0 0 15568888 478899999999999999
Q ss_pred CCCCCceEEEEcCCCCCCCCCccEEEEeeecccc
Q psy13279 237 PNTNGSQFFLCTTKQEICVKLLDLLASLDAGWET 270 (287)
Q Consensus 237 p~s~~SQFFIt~g~~~~LD~~ytVfG~VieG~dv 270 (287)
|++++||||||++++||||++|||||+|++||||
T Consensus 112 p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdv 145 (201)
T 3bo7_A 112 KHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDV 145 (201)
T ss_dssp TTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHH
T ss_pred CCCcccEEEEECCCCcccCCCceEEEEEecCHHH
Confidence 9999999999999999999999999999999995
No 29
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=100.00 E-value=5.6e-38 Score=275.59 Aligned_cols=125 Identities=43% Similarity=0.714 Sum_probs=111.7
Q ss_pred eEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCCcc
Q psy13279 3 IKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNRTR 82 (287)
Q Consensus 3 ~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 82 (287)
..++.|++|+|+||||.+.||+||+||++|| +++| |+++.||||+|+|
T Consensus 13 ~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~--~~g~-Ydg~~FhRVi~~F----------------------------- 60 (203)
T 2k7n_A 13 NVYLETSMGIIVLELYWKHAPKTCKNFAELA--RRGY-YNGTKFHRIIKDF----------------------------- 60 (203)
T ss_dssp EEEEEESSCEEEEEECTTTCTTHHHHHHHHH--HHTC-GGGCEEEEEETTT-----------------------------
T ss_pred EEEEEeCCCcEEEEEccCCCcHHHHHHHHHH--hcCc-cCCCEEEEEeCCc-----------------------------
Confidence 4577899999999999999999999999999 8899 9999999999999
Q ss_pred CCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceeccccCCCC
Q psy13279 83 HSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSMANSGPNT 162 (287)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s 162 (287)
|||+||+..
T Consensus 61 ---------------------------------~iQgGd~~~-------------------------------------- 69 (203)
T 2k7n_A 61 ---------------------------------MIQGGDPTG-------------------------------------- 69 (203)
T ss_dssp ---------------------------------EEEEECSSS--------------------------------------
T ss_pred ---------------------------------EEEcCCCCC--------------------------------------
Confidence 888888643
Q ss_pred CCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccc-cccccCchhhhhhhhcCCCCCC
Q psy13279 163 NGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDEN-FILKHTGPGVLSMANSGPNTNG 241 (287)
Q Consensus 163 ~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~-~~~~h~~~G~lsMA~~~p~s~~ 241 (287)
++.++.++|+..|++|+ ..++|.++|+|||||.+||+++
T Consensus 70 ----------------------------------------~g~gg~si~g~~f~dE~~~~l~h~~~G~lsMAn~gpnsng 109 (203)
T 2k7n_A 70 ----------------------------------------TGRGGASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNG 109 (203)
T ss_dssp ----------------------------------------SSSCCCTTSCSCBCCCCCCSSCCCSSCEEEEEESSTTCEE
T ss_pred ----------------------------------------CCCCCCccCCCcccccccccccCCCCeEEEEeeCCCCCcc
Confidence 22344566777788886 4788989999999999999999
Q ss_pred ceEEEEcCCCCCCCCCccEEEEeeecccc
Q psy13279 242 SQFFLCTTKQEICVKLLDLLASLDAGWET 270 (287)
Q Consensus 242 SQFFIt~g~~~~LD~~ytVfG~VieG~dv 270 (287)
||||||++++||||++|||||||++||||
T Consensus 110 SQFFIt~~~~~~LDg~~tVFG~VveGmdv 138 (203)
T 2k7n_A 110 SQFFVTLAPTQWLDGKHTIFGRVCQGIGM 138 (203)
T ss_dssp EEEEEESSCCCSSTTTSCEEEEEESCHHH
T ss_pred cEEEEEcCCCCccCCCeeEEEEEEcCHHH
Confidence 99999999999999999999999999995
No 30
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=100.00 E-value=2.4e-37 Score=269.57 Aligned_cols=123 Identities=38% Similarity=0.566 Sum_probs=107.9
Q ss_pred EECceEeeEEEEEEeCCCChHHHHHHHHHHccC-------------CCceecCceeEEeccCcccccccccccccccccc
Q psy13279 4 KIGKQEVGRITIQLRYDLVPRTAENFRCLCTHE-------------KGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKF 70 (287)
Q Consensus 4 ~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~-------------~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~ 70 (287)
.++.|++|+|+||||.+.||+||+||++||+|+ .+| |+|+.||||+|+|
T Consensus 26 v~l~t~~G~I~ieL~~~~aP~tv~NF~~L~tG~~~~~~~~~g~~~~~~~-Y~g~~FhRVi~~f----------------- 87 (191)
T 1w74_A 26 ATLHTNRGDIKIALFGNHAPKTVANFVGLAQGTKDYSTQNASGGPSGPF-YDGAVFHRVIQGF----------------- 87 (191)
T ss_dssp EEEEETTEEEEEEECTTTSHHHHHHHHHHHHTCSCCSSCCTTBSSSSCS-STTEEEEEEETTT-----------------
T ss_pred EEEEecceeEEEEEcCCCChHHHHHHHHHhcCCcccccccccccccCCc-cCCCEEEEEeCCC-----------------
Confidence 567899999999999999999999999999774 367 9999999999999
Q ss_pred ccccccCCCCccCCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCC
Q psy13279 71 RFDFAAGGNRTRHSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGP 150 (287)
Q Consensus 71 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~ 150 (287)
|||+||+.. +|+|
T Consensus 88 ---------------------------------------------miQgGd~~g-~G~g--------------------- 100 (191)
T 1w74_A 88 ---------------------------------------------MIQGGDPTG-TGRG--------------------- 100 (191)
T ss_dssp ---------------------------------------------EEEECCTTS-SSSC---------------------
T ss_pred ---------------------------------------------EEecCCCCC-CCCC---------------------
Confidence 999999642 2221
Q ss_pred CceeccccCCCCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCccccc-ccccccCchhh
Q psy13279 151 GVLSMANSGPNTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDE-NFILKHTGPGV 229 (287)
Q Consensus 151 G~l~ma~~~~~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E-~~~~~h~~~G~ 229 (287)
+ ||+.|++| +..++|+++|+
T Consensus 101 --------------------------------------------------------g---~g~~f~dE~~~~l~h~~~G~ 121 (191)
T 1w74_A 101 --------------------------------------------------------G---PGYKFADEFHPELQFDKPYL 121 (191)
T ss_dssp --------------------------------------------------------C---SSCCBCCCCCTTCCSCSSSE
T ss_pred --------------------------------------------------------C---CCCccccccccCCCcCCCcE
Confidence 1 25567788 46788999999
Q ss_pred hhhhhcCCCCCCceEEEEcCCCCCCCCCccEEEEeee--cccc
Q psy13279 230 LSMANSGPNTNGSQFFLCTTKQEICVKLLDLLASLDA--GWET 270 (287)
Q Consensus 230 lsMA~~~p~s~~SQFFIt~g~~~~LD~~ytVfG~Vie--G~dv 270 (287)
|||||++||+|+||||||++++||||++|||||||++ ||||
T Consensus 122 lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdv 164 (191)
T 1w74_A 122 LAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRV 164 (191)
T ss_dssp EEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHH
T ss_pred EEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHH
Confidence 9999999999999999999999999999999999999 9995
No 31
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=100.00 E-value=3.6e-37 Score=267.27 Aligned_cols=126 Identities=35% Similarity=0.635 Sum_probs=110.7
Q ss_pred eEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCCcc
Q psy13279 3 IKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNRTR 82 (287)
Q Consensus 3 ~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 82 (287)
..++.|++|+|+||||++.||+||+||++|| +.+| |+++.||||+|+|
T Consensus 26 ~V~l~T~~G~I~ieL~~~~aP~tv~NF~~L~--~~g~-Y~g~~FhRvi~~f----------------------------- 73 (185)
T 2hq6_A 26 KVLLKTTAGDIDIELWSKEAPKACRNFIQLC--LEAY-YDNTIFHRVVPGF----------------------------- 73 (185)
T ss_dssp EEEEEETTEEEEEEEBTTTCHHHHHHHHHHH--HTTT-TTTEECCEEETTT-----------------------------
T ss_pred EEEEEeCCccEEEEEeCCCCcHHHHHHHHHh--hcCc-cCCCEEEEEECCC-----------------------------
Confidence 3567899999999999999999999999999 8899 9999999999999
Q ss_pred CCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceeccccCCCC
Q psy13279 83 HSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSMANSGPNT 162 (287)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s 162 (287)
|||+||+..
T Consensus 74 ---------------------------------~iQgGd~~~-------------------------------------- 82 (185)
T 2hq6_A 74 ---------------------------------IVQGGDPTG-------------------------------------- 82 (185)
T ss_dssp ---------------------------------EEEECCTTS--------------------------------------
T ss_pred ---------------------------------EEEcCCCCC--------------------------------------
Confidence 899988642
Q ss_pred CCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCccccccc-ccccCchhhhhhhhcCCCCCC
Q psy13279 163 NGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENF-ILKHTGPGVLSMANSGPNTNG 241 (287)
Q Consensus 163 ~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~-~~~h~~~G~lsMA~~~p~s~~ 241 (287)
+|.++.++||.+|++|.. .++|+++|+|||||++|++++
T Consensus 83 ----------------------------------------~g~gg~si~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~g 122 (185)
T 2hq6_A 83 ----------------------------------------TGSGGESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNG 122 (185)
T ss_dssp ----------------------------------------SSSCCCCTTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBC
T ss_pred ----------------------------------------CCCCCCcccCCccccccccCcccCCCeEEEEccCCCCCcc
Confidence 233445667777888864 678889999999999999999
Q ss_pred ceEEEEcCCCCCCCCCccEEEEeeecccccc
Q psy13279 242 SQFFLCTTKQEICVKLLDLLASLDAGWETRG 272 (287)
Q Consensus 242 SQFFIt~g~~~~LD~~ytVfG~VieG~dv~~ 272 (287)
||||||++++||||++|||||||+ ||++..
T Consensus 123 SQFFIt~~~~~~LDg~~tVFG~V~-G~~v~~ 152 (185)
T 2hq6_A 123 SQFFFTLGRADELNNKHTIFGKVT-GDTVYN 152 (185)
T ss_dssp SCEEEESSCCGGGTTTSCEEEEEC-GGGHHH
T ss_pred ceEEEECCCCCccCCCceEEEEEE-eCeeeh
Confidence 999999999999999999999999 887643
No 32
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=100.00 E-value=7.8e-36 Score=267.09 Aligned_cols=125 Identities=31% Similarity=0.570 Sum_probs=100.2
Q ss_pred eEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCCcc
Q psy13279 3 IKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNRTR 82 (287)
Q Consensus 3 ~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 82 (287)
..++.|++|+|+||||.+.||+||+||++|| +.|| |+++.||||+|+|
T Consensus 23 ~V~l~T~~G~I~ieL~~d~aP~tv~NF~~L~--~~g~-Ydgt~FhRVi~~F----------------------------- 70 (232)
T 3bkp_A 23 KVVLHTSLGDLDVELWARECPLACRNFVQLC--LEGY-YVNTIFHRVVKDF----------------------------- 70 (232)
T ss_dssp EEEEEETTEEEEEEEBTTTCHHHHHHHHHHH--HHTT-TTTCBEEEEETTT-----------------------------
T ss_pred EEEEEECCCcEEEEEcCCCCcHHHHHHHHHh--hcCc-cCCCEEEEEeCCC-----------------------------
Confidence 3567899999999999999999999999999 8899 9999999999999
Q ss_pred CCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCcccc--CcccccCcccccccCCCceeccccCC
Q psy13279 83 HSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIY--GNKFEDENFVLKHTGPGVLSMANSGP 160 (287)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~--~~~~~~e~~~~~h~~~G~l~ma~~~~ 160 (287)
|||+||+.. +|+|+.++| +..+++|+.
T Consensus 71 ---------------------------------miQgGdp~~-~G~Gg~si~~~g~~f~dE~~----------------- 99 (232)
T 3bkp_A 71 ---------------------------------IVQGGDPTG-TGRGGADTTFDGKPFDVETH----------------- 99 (232)
T ss_dssp ---------------------------------EEEECCTTS-SSSCCCCCTTTTCCBCCCCC-----------------
T ss_pred ---------------------------------EEEcCCCCC-CCCCCCccccCCCccCCccc-----------------
Confidence 999999864 555555555 444444432
Q ss_pred CCCCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhhhhhcCC---
Q psy13279 161 NTNGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLSMANSGP--- 237 (287)
Q Consensus 161 ~s~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~lsMA~~~p--- 237 (287)
..++|+++|+|||||.++
T Consensus 100 -----------------------------------------------------------~~l~h~~~G~lsMA~~g~~~~ 120 (232)
T 3bkp_A 100 -----------------------------------------------------------PRLKFRYRGLVGVANLGRSSK 120 (232)
T ss_dssp -----------------------------------------------------------TTCCCCSTTEEEECCCC----
T ss_pred -----------------------------------------------------------cCcCcCCCeEEEEeccCCccc
Confidence 234455555555555553
Q ss_pred -----------CCCCceEEEEcCCCCCCCCCccEEEEeeecccc
Q psy13279 238 -----------NTNGSQFFLCTTKQEICVKLLDLLASLDAGWET 270 (287)
Q Consensus 238 -----------~s~~SQFFIt~g~~~~LD~~ytVfG~VieG~dv 270 (287)
++++||||||++++||||++|||||+|+ ||++
T Consensus 121 ~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~v 163 (232)
T 3bkp_A 121 DAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHTL 163 (232)
T ss_dssp ------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGGH
T ss_pred ccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCch
Confidence 7999999999999999999999999999 8875
No 33
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=100.00 E-value=1.6e-35 Score=253.02 Aligned_cols=123 Identities=24% Similarity=0.410 Sum_probs=105.8
Q ss_pred eEECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCCcc
Q psy13279 3 IKIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNRTR 82 (287)
Q Consensus 3 ~~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~ 82 (287)
..++.|++|+|+||||++.||+||+||++|| +++| |+++.||||+|+|
T Consensus 6 ~v~~~t~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~FhRvi~~f----------------------------- 53 (166)
T 1v9t_A 6 HVLLTTSAGNIELELDKQKAPVSVQNFVDYV--NSGF-YNNTTFHRVIPGF----------------------------- 53 (166)
T ss_dssp EEEEEETTEEEEEEECTTTCHHHHHHHHHHH--HTTT-TTTCBEEEEETTT-----------------------------
T ss_pred EEEEEeCCccEEEEEcCCCCcHHHHHHHHHh--ccCC-CCCCEEEEEECCc-----------------------------
Confidence 3567899999999999999999999999999 8999 9999999999999
Q ss_pred CCCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceeccccCCCC
Q psy13279 83 HSFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSMANSGPNT 162 (287)
Q Consensus 83 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s 162 (287)
|||+||+....+ +
T Consensus 54 ---------------------------------~iQgGd~~~~~~-~--------------------------------- 66 (166)
T 1v9t_A 54 ---------------------------------MIQGGGFTEQMQ-Q--------------------------------- 66 (166)
T ss_dssp ---------------------------------EEEESSBCTTCC-B---------------------------------
T ss_pred ---------------------------------EEEcCCcCcCCC-C---------------------------------
Confidence 999999764110 0
Q ss_pred CCCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhhhhhc-CCCCCC
Q psy13279 163 NGSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLSMANS-GPNTNG 241 (287)
Q Consensus 163 ~~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~lsMA~~-~p~s~~ 241 (287)
+.++.+|.+|....+++++|+|||||+ +|||++
T Consensus 67 ----------------------------------------------~~~g~~~~dE~~~~l~~~~G~lsmA~~~~p~t~g 100 (166)
T 1v9t_A 67 ----------------------------------------------KKPNPPIKNEADNGLRNTRGTIAMARTADKDSAT 100 (166)
T ss_dssp ----------------------------------------------CCCCCCBCCCGGGSCCCCTTEEEECCCSSTTCBC
T ss_pred ----------------------------------------------CCCCCcccccccccccCCceEEEEeecCCCCCcc
Confidence 011344777766556778999999997 499999
Q ss_pred ceEEEEcCCCCCCCCC-----ccEEEEeeecccc
Q psy13279 242 SQFFLCTTKQEICVKL-----LDLLASLDAGWET 270 (287)
Q Consensus 242 SQFFIt~g~~~~LD~~-----ytVfG~VieG~dv 270 (287)
||||||++++||||++ |||||+|++||||
T Consensus 101 SQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dv 134 (166)
T 1v9t_A 101 SQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDV 134 (166)
T ss_dssp SCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHH
T ss_pred ceEEEEeCCccccCCccCcCCeeEEEEEecCHHH
Confidence 9999999999999998 9999999999996
No 34
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=100.00 E-value=8.6e-36 Score=254.18 Aligned_cols=122 Identities=27% Similarity=0.422 Sum_probs=104.7
Q ss_pred EECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCCccC
Q psy13279 4 KIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNRTRH 83 (287)
Q Consensus 4 ~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (287)
.++.|++|+|+||||++.||+||+||++|| ++|| |+++.||||+|+|
T Consensus 2 v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~FhRvi~~f------------------------------ 48 (164)
T 1lop_A 2 VTFHTNHGDIVIKTFDDKAPETVKNFLDYC--REGF-YNNTIFHRVINGF------------------------------ 48 (164)
T ss_dssp EEEEETTEEEEEEECTTTSHHHHHHHHHHH--HTTT-TTTEECCEEETTT------------------------------
T ss_pred EEEEeCCCCEEEEEeCCCCcHHHHHHHHHH--hcCC-CCCCEEEEEeCCc------------------------------
Confidence 467899999999999999999999999999 8999 9999999999999
Q ss_pred CCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceeccccCCCCC
Q psy13279 84 SFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSMANSGPNTN 163 (287)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~ 163 (287)
|||+||+....
T Consensus 49 --------------------------------~iQgGd~~~~~------------------------------------- 59 (164)
T 1lop_A 49 --------------------------------MIQGGGFEPGM------------------------------------- 59 (164)
T ss_dssp --------------------------------EEEESSEETTT-------------------------------------
T ss_pred --------------------------------eEecCCcccCC-------------------------------------
Confidence 99999865310
Q ss_pred CCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhhhhhc-CCCCCCc
Q psy13279 164 GSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLSMANS-GPNTNGS 242 (287)
Q Consensus 164 ~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~lsMA~~-~p~s~~S 242 (287)
+.++|+.+|++|.....++++|+|||||+ +|+|++|
T Consensus 60 -------------------------------------------g~~~~g~~~~dE~~~~l~~~~G~lsmA~~~~p~s~gS 96 (164)
T 1lop_A 60 -------------------------------------------KQKATKEPIKNEANNGLKNTRGTLAMARTQAPHSATA 96 (164)
T ss_dssp -------------------------------------------EECCCCCCBCCCCCSSCCCCTTEEEECCCSSTTCBCS
T ss_pred -------------------------------------------CcCCCCCccccccccccccCccEEEEeecCCCCCccc
Confidence 11234556777865434446999999985 6999999
Q ss_pred eEEEEcCCCCCCCCC--------ccEEEEeeecccc
Q psy13279 243 QFFLCTTKQEICVKL--------LDLLASLDAGWET 270 (287)
Q Consensus 243 QFFIt~g~~~~LD~~--------ytVfG~VieG~dv 270 (287)
|||||++++||||++ |||||+|++||||
T Consensus 97 QFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dv 132 (164)
T 1lop_A 97 QFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDE 132 (164)
T ss_dssp CEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHH
T ss_pred eEEEEcCCccccCCccccccCCceEEEEEEecCHHH
Confidence 999999999999998 9999999999996
No 35
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=100.00 E-value=6e-35 Score=249.61 Aligned_cols=122 Identities=25% Similarity=0.383 Sum_probs=103.6
Q ss_pred EECceEeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCCccC
Q psy13279 4 KIGKQEVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNRTRH 83 (287)
Q Consensus 4 ~i~~t~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~ 83 (287)
.++.|++|+|+||||.+.||+||+||++|| +++| |+++.||||+|+|
T Consensus 6 v~l~T~~G~i~ieL~~~~aP~t~~NF~~L~--~~g~-Y~g~~FhRvi~~f------------------------------ 52 (167)
T 3s6m_A 6 VELHTNHGVIKLELDEAKAPKTVENFLNYV--KKGH-YDGTIFHRVINGF------------------------------ 52 (167)
T ss_dssp EEEEETTEEEEEEECTTTCHHHHHHHHHHH--HHTT-TTTEECCEEETTT------------------------------
T ss_pred EEEEeCCceEEEEEeCCCCcHHHHHHHHHh--hhcc-cCCCEeEEecCCc------------------------------
Confidence 466899999999999999999999999999 8899 9999999999999
Q ss_pred CCCCCCCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCccccCcccccCcccccccCCCceeccccCCCCC
Q psy13279 84 SFPIPLPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIYGNKFEDENFVLKHTGPGVLSMANSGPNTN 163 (287)
Q Consensus 84 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~ 163 (287)
|||+||+....+
T Consensus 53 --------------------------------~iQgGd~~~~~~------------------------------------ 64 (167)
T 3s6m_A 53 --------------------------------MIQGGGFEPGLK------------------------------------ 64 (167)
T ss_dssp --------------------------------EEEESSEETTTE------------------------------------
T ss_pred --------------------------------EEEeccccCCCC------------------------------------
Confidence 999998653100
Q ss_pred CCceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccccccccCchhhhhhhh-cCCCCCCc
Q psy13279 164 GSQFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDENFILKHTGPGVLSMAN-SGPNTNGS 242 (287)
Q Consensus 164 ~SqFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~~~~~h~~~G~lsMA~-~~p~s~~S 242 (287)
.+.++.++.+|.....++++|+||||| .+|++++|
T Consensus 65 --------------------------------------------~~~~~~~~~~E~~~~l~~~~G~lsmA~~~~p~t~gS 100 (167)
T 3s6m_A 65 --------------------------------------------QKPTDAPIANEANNGLKNDTYTIAMARTNDPHSATA 100 (167)
T ss_dssp --------------------------------------------ECCCCCCBCCCGGGCCCCCTTEEEECCCSSTTCBCS
T ss_pred --------------------------------------------CCCCCCccCCcccccccCCccEEEEecCCCCCCccc
Confidence 011244466665444455899999999 56999999
Q ss_pred eEEEEcCCCCCCCCC--------ccEEEEeeecccc
Q psy13279 243 QFFLCTTKQEICVKL--------LDLLASLDAGWET 270 (287)
Q Consensus 243 QFFIt~g~~~~LD~~--------ytVfG~VieG~dv 270 (287)
|||||+++++|||++ |||||+|++||||
T Consensus 101 QFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dv 136 (167)
T 3s6m_A 101 QFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDI 136 (167)
T ss_dssp CEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHH
T ss_pred eEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHH
Confidence 999999999999998 9999999999996
No 36
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=99.97 E-value=2.6e-32 Score=257.86 Aligned_cols=136 Identities=24% Similarity=0.286 Sum_probs=109.5
Q ss_pred EeeEEEEEEeCCCChHHHHHHHHHHccCCCceecCceeEEeccCccccccccccccccccccccccccCCCCccCCCCCC
Q psy13279 9 EVGRITIQLRYDLVPRTAENFRCLCTHEKGFGYQGSSFHRIIPDFVSFMTKRQSLKSRFSKFRFDFAAGGNRTRHSFPIP 88 (287)
Q Consensus 9 ~~G~i~ieL~~~~aP~~~~nF~~L~~~~~g~~Y~g~~f~rvi~~~~~~~g~~~~~~~~~~~~~~~~~~~~~~~~~~~~~~ 88 (287)
+.|+|+||||.+.||+||+||++|| ++|| |+|+.|||| ++|
T Consensus 186 ~~G~I~IeL~~d~AP~Tv~NFl~L~--~~Gf-YdGt~FHRV-~gF----------------------------------- 226 (369)
T 3rfy_A 186 EDCVFRIVLDGYNAPVTAGNFVDLV--ERHF-YDGMEIQRS-DGF----------------------------------- 226 (369)
T ss_dssp SEEEEEEEEETTTCHHHHHHHHHHH--HTTT-TTTEECEEE-EEE-----------------------------------
T ss_pred cceEEEEEEeCCCCcHHHHHHHHHh--hcCC-cCCCeeeee-CCe-----------------------------------
Confidence 4999999999999999999999999 8999 999999999 999
Q ss_pred CCcccccCCCCCCCCCccccccCccCcEEeeCCCCCCCCCCCcccc---CcccccCcccccccCCCceeccccCCCCCCC
Q psy13279 89 LPMKYIRPCLDCGSKGTFQSHSSRINKMCQGGDFTNHNGTGGKSIY---GNKFEDENFVLKHTGPGVLSMANSGPNTNGS 165 (287)
Q Consensus 89 ~~~~~~~~~~~~~~~~~~~~~~~~~~~~~q~g~~~~~~~~g~~~~~---~~~~~~e~~~~~h~~~G~l~ma~~~~~s~~S 165 (287)
|||+||+.. +++|..... +..++.|.
T Consensus 227 ---------------------------mIQgGDp~g-~G~G~~~~~~g~~~~iP~E~----------------------- 255 (369)
T 3rfy_A 227 ---------------------------VVQTGDPEG-PAEGFIDPSTEKTRTVPLEI----------------------- 255 (369)
T ss_dssp ---------------------------EECCCCCCC-CCSCCCSCCCCCCCSSSSSS-----------------------
T ss_pred ---------------------------eEecCCCCC-CCCCccCcccCcCcccCccc-----------------------
Confidence 999999875 555532100 01111111
Q ss_pred ceeEEeeeccceeeeEEEEEEeeeeeeeeeccccccCCCCCcccccCCcccccc-----cccccCchhhhhhhhc--CCC
Q psy13279 166 QFFLCTTSINKHYYYYYYYIFLTRFTQMCQGGDFTNHNGTGGKSIYGNKFEDEN-----FILKHTGPGVLSMANS--GPN 238 (287)
Q Consensus 166 qFfI~l~~~g~~~vfG~v~~g~~vi~~m~QgGd~~~~~G~gg~si~g~~~~~E~-----~~~~h~~~G~lsMA~~--~p~ 238 (287)
.. .| .+.++|+..+.+|+ ..++|+++|+|||||+ +||
T Consensus 256 ---------------------------~~--------~G-~g~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPn 299 (369)
T 3rfy_A 256 ---------------------------MV--------TG-EKTPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFEND 299 (369)
T ss_dssp ---------------------------CS--------SS-SCCSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCC
T ss_pred ---------------------------cc--------cC-CCCCcCCCccccccccccccccccCCCceEEEeecCCCCC
Confidence 00 11 13467888888875 3789999999999998 799
Q ss_pred CCCceEEEEc-------CCCCCCCCCccEEEEeeecccc
Q psy13279 239 TNGSQFFLCT-------TKQEICVKLLDLLASLDAGWET 270 (287)
Q Consensus 239 s~~SQFFIt~-------g~~~~LD~~ytVfG~VieG~dv 270 (287)
|++||||||+ ++.+|||++|||||+|++||||
T Consensus 300 SngSQFFItl~d~~L~~~~~~~LDgkytVFG~VveGmdV 338 (369)
T 3rfy_A 300 SGSSQVFWLLKESELTPSNSNILDGRYAVFGYVTDNEDF 338 (369)
T ss_dssp CSSCCCCCCCEEEEECSCCCSSSCSCEEEEEEEEESTTG
T ss_pred CccceEEEEecccccCCCCCcccCCCeeEEEEEecCHHH
Confidence 9999999999 4789999999999999999997
No 37
>2igv_A Peptidyl-prolyl CIS-trans isomerase 3; rotamase; 1.67A {Caenorhabditis elegans} SCOP: b.62.1.1 PDB: 1e3b_A 1e8k_A 1dyw_A 2igw_A 2hqj_A
Probab=99.60 E-value=3.6e-16 Score=133.95 Aligned_cols=69 Identities=58% Similarity=0.867 Sum_probs=62.5
Q ss_pred CccccCcccccCcccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeeccc
Q psy13279 130 GKSIYGNKFEDENFVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGGD 198 (287)
Q Consensus 130 ~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgGd 198 (287)
+.++|+.++++|++.++|+++|+||||+.+|++++|||||++.+. ++|++||+|+++++++++|.+.+.
T Consensus 82 g~siyg~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~t 154 (173)
T 2igv_A 82 GESIYGEKFPDENFKEKHTGPGVLSMANAGPNTNGSQFFLCTVKTEWLDGKHVVFGRVVEGLDVVKAVESNGS 154 (173)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC
T ss_pred CCccCCCcccCcccccCCCCCeEEEEeeCCCCCcceEEEEEcCCccccCCCeeEEEEEecCHHHHHHHHhCCC
Confidence 456889999999999999999999999999999999999999987 899999999999999988876543
No 38
>1a58_A Cyclophilin; isomerase, ppiase; 1.95A {Brugia malayi} SCOP: b.62.1.1 PDB: 1a33_A 1c5f_A*
Probab=99.59 E-value=4e-16 Score=134.10 Aligned_cols=68 Identities=49% Similarity=0.652 Sum_probs=62.1
Q ss_pred CccccCcccccCcccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeecc
Q psy13279 130 GKSIYGNKFEDENFVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGG 197 (287)
Q Consensus 130 ~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgG 197 (287)
+.++|+..+++|+..++|+++|+||||+.+|++++|||||++.+. ++|++||+|+++++++++|.+.+
T Consensus 86 g~si~g~~f~dE~~~~~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~ 157 (177)
T 1a58_A 86 GESIYGGMFDDEEFVMKHDEPFVVSMANKGPNTNGSQFFITTTPAPHLNNIHVVFGKVVSGQEVVTKIEYLK 157 (177)
T ss_dssp CCCTTSSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSC
T ss_pred CCcccCCcccCcccCcccCCCeEEEEeeCCCCCceeEEEEECCCCCccCCCEEEEEEEEcCHHHHHHHHhCC
Confidence 456889999999999999999999999999999999999999987 89999999999999998777654
No 39
>1qng_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, cyclophilin-cyclosporin complex, immunosuppressant, cyclophilin; HET: BMT; 2.1A {Plasmodium falciparum} SCOP: b.62.1.1 PDB: 1qnh_A*
Probab=99.59 E-value=4.1e-16 Score=133.23 Aligned_cols=69 Identities=46% Similarity=0.721 Sum_probs=62.8
Q ss_pred CccccCcccccCcccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeeccc
Q psy13279 130 GKSIYGNKFEDENFVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGGD 198 (287)
Q Consensus 130 ~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgGd 198 (287)
+.++|+..+++|++.++|+++|+||||+.+|++++|||||++.+. ++|++||+|+++++++++|.+.+.
T Consensus 81 g~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~t 153 (170)
T 1qng_A 81 GESIYGRSFTDENFNMKHDQPGLLSMANAGPNTNSSQFFITLVPCPWLDGKHVVFGKVIEGMNVVREMEKEGA 153 (170)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC
T ss_pred CccccCCcccccccccccCCCCEEEEeecCCCCcccEEEEECCCCcccCCCeeEEEEEECCHHHHHHHHhCCC
Confidence 457889999999999999999999999999999999999999987 899999999999999988877653
No 40
>2cmt_A Peptidyl-prolyl CIS-trans isomerase E; rotamase activity, rotamase, RNA-binding, cyclosporin, cyclophilin, beta-barrel; 1.50A {Schistosoma mansoni} PDB: 2ck1_A
Probab=99.59 E-value=5.3e-16 Score=132.81 Aligned_cols=69 Identities=58% Similarity=0.835 Sum_probs=62.5
Q ss_pred CccccCcccccCcccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeeccc
Q psy13279 130 GKSIYGNKFEDENFVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGGD 198 (287)
Q Consensus 130 ~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgGd 198 (287)
+.++|+..+++|+..++|+++|+||||+.+|++++|||||++.+. ++|++||+|.++++++++|.+.+.
T Consensus 82 g~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~G~dvv~~I~~~~~ 154 (172)
T 2cmt_A 82 GKSIYGRKFDDENFQLRHEGFGVLSMANSGPNTNGSQFFICTTKCDWLDGKHVVFGRVVDGQNVVKKMESVGS 154 (172)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHGGGGCC
T ss_pred CCccCCCcccccccCcccCCceEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCCC
Confidence 456889999999999999999999999999999999999999987 899999999999999988876543
No 41
>2z6w_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin D; HET: BMT MLE CIT; 0.96A {Homo sapiens} SCOP: b.62.1.1 PDB: 3rcg_A* 3r49_A* 3r54_A 3r56_A* 3r57_A* 3r59_A* 3rcf_A* 3r4g_A* 3rci_X* 3rck_X* 3rcl_A* 3rd9_X* 3rda_X* 3rdb_A* 3rdc_A* 2bit_X 2biu_X 3qyu_A 3k0m_A 1ak4_A* ...
Probab=99.59 E-value=4.7e-16 Score=132.29 Aligned_cols=68 Identities=54% Similarity=0.854 Sum_probs=61.9
Q ss_pred ccccCcccccCcccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeeccc
Q psy13279 131 KSIYGNKFEDENFVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGGD 198 (287)
Q Consensus 131 ~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgGd 198 (287)
.++|+.++++|++.++|+++|+||||+.+|++++|||||++.+. ++|++||+|.++++++++|.+.++
T Consensus 76 ~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~~vFG~Vv~G~dvv~~I~~~~~ 147 (165)
T 2z6w_A 76 KSIYGSRFPDENFTLKHVGPGVLSMANAGPNTNGSQFFICTIKTDWLDGKHVVFGHVIEGMDVVKKIESFGS 147 (165)
T ss_dssp CBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC
T ss_pred CcccCCcccCcccccccCCCCEEEEeeCCCCCcccEEEEEcCCCcccCCCeeEEEEEEcCHHHHHHHHhCCC
Confidence 46788899999999999999999999999999999999999986 899999999999999988877653
No 42
>2r99_A Peptidyl-prolyl CIS-trans isomerase E; CIS-trans isomerization, structural genomics consortium, SGC, alternative splicing, mRNA processing; 1.61A {Homo sapiens} SCOP: b.62.1.1 PDB: 3uch_A 1zmf_A
Probab=99.59 E-value=5e-16 Score=133.05 Aligned_cols=68 Identities=60% Similarity=0.892 Sum_probs=62.3
Q ss_pred CccccCcccccCcccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeecc
Q psy13279 130 GKSIYGNKFEDENFVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGG 197 (287)
Q Consensus 130 ~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgG 197 (287)
+.++|+..+++|+..++|+++|+||||+.+|++++|||||++.+. ++|++||+|+++++++++|.+.+
T Consensus 83 g~si~g~~f~dE~~~l~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~ 154 (173)
T 2r99_A 83 GKSIYGKKFDDENFILKHTGPGLLSMANSGPNTNGSQFFLTCDKTDWLDGKHVVFGEVTEGLDVLRQIEAQG 154 (173)
T ss_dssp CCBTTBSCBCCCCCCSCCCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTC
T ss_pred CCccCCCcccCcccCcccCCCcEEEEccCCCCCcccEEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHhCC
Confidence 457889999999999999999999999999999999999999986 89999999999999998887654
No 43
>1mzw_A Cyclophilin H, U-snRNP-ASSOCIATED cyclophilin; cyclophilin, peptidyl-prolyl-CIS/trans isomerase, spliceosome, U4/U6-60K protein, WD protein; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1qoi_A
Probab=99.59 E-value=4.9e-16 Score=133.55 Aligned_cols=68 Identities=43% Similarity=0.614 Sum_probs=62.0
Q ss_pred CccccCcccccCcccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeecc
Q psy13279 130 GKSIYGNKFEDENFVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGG 197 (287)
Q Consensus 130 ~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgG 197 (287)
+.++|+..+++|+..++|+++|+||||+.+|++++|||||++.+. ++|++||+|+++++++++|.+.+
T Consensus 87 g~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~VFG~Vv~G~dvv~~I~~~~ 158 (177)
T 1mzw_A 87 VASIYRGPFADENFKLRHSAPGLLSMANSGPSTNGCQFFITCSKCDWLDGKHVVFGKIIDGLLVMRKIENVP 158 (177)
T ss_dssp CCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSC
T ss_pred CCccCCCcccCcccccccCCCCEEEEccCCCCCcceEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCC
Confidence 356889999999999999999999999999999999999999987 89999999999999998777654
No 44
>2poy_A Peptidyl-prolyl CIS-trans isomerase; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, isomerase, S genomics, structural genomics consortium; HET: BMT; 1.80A {Cryptosporidium parvum iowa II} PDB: 2plu_A*
Probab=99.58 E-value=6.1e-16 Score=133.94 Aligned_cols=69 Identities=48% Similarity=0.722 Sum_probs=61.8
Q ss_pred CccccCcccccCcccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeeccc
Q psy13279 130 GKSIYGNKFEDENFVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGGD 198 (287)
Q Consensus 130 ~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgGd 198 (287)
+.++|+..+++|+..++|+++|+||||+.+|++++|||||++.+. ++|++||+|+++++++++|.+.+.
T Consensus 98 g~si~g~~f~dE~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t 170 (186)
T 2poy_A 98 GESIYGSKFRDENFVYTHDAPFLLSMANAGPNTNGSQFFITTVPCPWLDGKHVVFGKVLEGMEVVKSIEKCGS 170 (186)
T ss_dssp CCCTTC-CBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHTCC
T ss_pred CCccCCCcccCcccccccCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCeeEEEEEecCHHHHHHHHhCCC
Confidence 456889999999999999999999999999999999999999987 899999999999999988877653
No 45
>3ich_A Peptidyl-prolyl CIS-trans isomerase B; beta sandwich, cyclosporin, endoplasmic reticulum, glycoprot isomerase, rotamase; 1.20A {Homo sapiens} PDB: 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=99.58 E-value=7.2e-16 Score=133.72 Aligned_cols=68 Identities=47% Similarity=0.703 Sum_probs=62.4
Q ss_pred CccccCcccccCcccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeecc
Q psy13279 130 GKSIYGNKFEDENFVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGG 197 (287)
Q Consensus 130 ~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgG 197 (287)
+.++|+..+++|+..++|+++|+||||+.+|++++|||||++.+. ++|++||+|+++++++++|.+.+
T Consensus 87 g~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~ 158 (188)
T 3ich_A 87 GKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVESTK 158 (188)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSC
T ss_pred CccccCCcccccccCcccCCCeEEEEccCCCCCcccEEEEECCCCcccCCCeeEEEEEeCCHHHHHHHHhCC
Confidence 457889999999999999999999999999999999999999987 89999999999999998777754
No 46
>2wfi_A Peptidyl-prolyl CIS-trans isomerase G; phosphoprotein, PRE-mRNA splicing, alternative splicing, nucleus, rotamase, cyclosporin; HET: OCS; 0.75A {Homo sapiens} PDB: 2wfj_A* 2gw2_A
Probab=99.58 E-value=7.5e-16 Score=132.63 Aligned_cols=68 Identities=40% Similarity=0.547 Sum_probs=61.9
Q ss_pred CccccCcccccCcccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeecc
Q psy13279 130 GKSIYGNKFEDENFVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGG 197 (287)
Q Consensus 130 ~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgG 197 (287)
+.++|+..+++|++.++|+++|+||||+.+|++++|||||++.+. ++|++||+|+++++++++|.+..
T Consensus 89 g~si~g~~f~dE~~~~~h~~~G~lsMAn~gp~tngSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~ 160 (179)
T 2wfi_A 89 GESIYGGFFEDESFAVKHNKEFLLSMANRGKDTNGSQFFITTKPTPHLDGHHVVFGQVISGQEVVREIENQK 160 (179)
T ss_dssp CCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCC
T ss_pred CCcccCCcccccccCcCcCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCeeEEEEEeCCHHHHHHHHcCC
Confidence 457889999999999999999999999999999999999999987 89999999999999998776653
No 47
>2he9_A NK-tumor recognition protein; cyclosporin, isomerase, membrane, repeat, rotamase, peptidylprolyl isomerase, structural genomics; 2.00A {Homo sapiens}
Probab=99.57 E-value=9.4e-16 Score=133.38 Aligned_cols=68 Identities=43% Similarity=0.585 Sum_probs=62.1
Q ss_pred CccccCcccccCcccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeecc
Q psy13279 130 GKSIYGNKFEDENFVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGG 197 (287)
Q Consensus 130 ~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgG 197 (287)
+.++|+..+++|++.++|+++|+||||+.+|++++|||||++.+. ++|++||+|+++++++++|.+.+
T Consensus 99 g~siyg~~f~dE~~~l~h~~~G~lsMAn~gp~tngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~ 170 (192)
T 2he9_A 99 GESIYGGYFKDENFILKHDRAFLLSMANRGKHTNGSQFFITTKPAPHLDGVHVVFGLVISGFEVIEQIENLK 170 (192)
T ss_dssp CCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSC
T ss_pred CCcccCCcccCccccCCCCCCeEEEEEeCCCCCcceEEEEEcCCCcccCCCccEEEEEEeCHHHHHHHHcCC
Confidence 457889999999999999999999999999999999999999987 89999999999999998777654
No 48
>2haq_A Cyclophilin; rotamase, proline, isomerase, CIS-trans, protozoa, KAla-AZAR.; 1.97A {Leishmania donovani} PDB: 3eov_A* 3bt8_A
Probab=99.56 E-value=1.4e-15 Score=130.22 Aligned_cols=67 Identities=46% Similarity=0.675 Sum_probs=61.1
Q ss_pred CccccCcccccCcccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeecc
Q psy13279 130 GKSIYGNKFEDENFVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGG 197 (287)
Q Consensus 130 ~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgG 197 (287)
+.++|+.++++|+..++|. +|+||||+.+|++++|||||++.+. ++|++||+|.++++++++|.+.+
T Consensus 83 g~si~g~~f~dE~~~l~h~-~G~lsmAn~gp~tngSQFfIt~~~~~~LDg~~~vFG~Vv~G~dvv~~I~~~~ 153 (172)
T 2haq_A 83 GKSIYGEKFADENLNVKHF-VGALSMANAGPNTNGSQFFITTAPTPWLDGRHVVFGKVLDGMDVVLRIEKTK 153 (172)
T ss_dssp CCCSSSSCBCCCCCCSCCC-TTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSC
T ss_pred CccccCCcccCcCCCcccC-ceEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEeCCHHHHHHHHhCC
Confidence 4578899999999899999 9999999999999999999999987 89999999999999998777654
No 49
>3pmp_A Cyclophilin A; peptidyl prolyl isomerase, isomerase-immunosuppressant compl; HET: BMT; 1.47A {Moniliophthora perniciosa} SCOP: b.62.1.1 PDB: 3o7t_A
Probab=99.55 E-value=1.9e-15 Score=128.37 Aligned_cols=69 Identities=52% Similarity=0.749 Sum_probs=62.8
Q ss_pred CccccCcccccCcccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeeccc
Q psy13279 130 GKSIYGNKFEDENFVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGGD 198 (287)
Q Consensus 130 ~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgGd 198 (287)
+.++|+.++++|++.++|+++|+||||+.+|++++|||||++.+. ++|++||+|+++++++++|.+.+.
T Consensus 74 g~si~g~~~~dE~~~l~h~~~G~lsma~~g~~t~~SQFfIt~~~~~~Ld~~~~vFG~Vv~G~~vv~~I~~~~~ 146 (164)
T 3pmp_A 74 GKSIYGEKFADENFQVKHTKPGLLSMANAGANTNGSQFFITTVPTSWLDGKHVVFGEVIEGLDIVRKVEGKGS 146 (164)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC
T ss_pred CcccCCccccccccccCcCCCcEEEEeeCCCCCcccEEEEECCCChhhCCCccEEEEEeCCHHHHHHHHhCCC
Confidence 457889999999999999999999999999999999999999986 899999999999999988876543
No 50
>4fru_A Cyclophilin B, peptidyl-prolyl CIS-trans isomerase; cyclophilin-type ppiase, peptidyl-prolyl CIS-trans isomerase chaperone, foldase; HET: ME2 PEG; 1.10A {Equus caballus} PDB: 4frv_A* 3ich_A 3ici_A* 1cyn_A* 2esl_A* 2rmc_A* 1h0p_A 1xo7_A 1xq7_A*
Probab=99.55 E-value=2e-15 Score=130.61 Aligned_cols=68 Identities=47% Similarity=0.702 Sum_probs=62.4
Q ss_pred CccccCcccccCcccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeecc
Q psy13279 130 GKSIYGNKFEDENFVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGG 197 (287)
Q Consensus 130 ~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgG 197 (287)
+.++|+..+++|+..++|+++|+||||+.++++++|||||++.+. ++|++||+|+++++++++|.+.+
T Consensus 84 g~si~g~~f~de~~~~~h~~~G~lsma~~gp~t~~SQFfI~~~~~~~Ld~~~~vFG~Vv~G~dvv~~I~~~~ 155 (185)
T 4fru_A 84 GKSIYGERFPDENFKLKHYGPGWVSMANAGKDTNGSQFFITTVKTAWLDGKHVVFGKVLEGMEVVRKVETTK 155 (185)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSC
T ss_pred CccccCCccCccccccCcCCCeEEEEeeCCCCCcceEEEEEeCCCcccCCCccEEEEEeCCHHHHHHHHhCC
Confidence 457889999999999999999999999999999999999999887 89999999999999998777654
No 51
>3rdd_A Peptidyl-prolyl CIS-trans isomerase A; beta barrel, cytosolic, inhibito isomerase-isomerase inhibitor complex; HET: EA4; 2.14A {Homo sapiens}
Probab=99.54 E-value=3.5e-15 Score=129.00 Aligned_cols=69 Identities=59% Similarity=0.927 Sum_probs=63.1
Q ss_pred CccccCcccccCcccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeeccc
Q psy13279 130 GKSIYGNKFEDENFVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGGD 198 (287)
Q Consensus 130 ~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgGd 198 (287)
+.++|+..+++|++.++|+++|+||||+.+|++++|||||++.+. ++|++||+|+++++++++|.+.++
T Consensus 94 g~si~g~~~~de~~~l~h~~~G~lsmA~~gp~s~gSQFfIt~~~~~~LDg~~tVFG~Vv~G~dvv~~I~~~~~ 166 (184)
T 3rdd_A 94 GKSIYGEKFEDENFILKHTGPGILSMANAGPNTNGSQFFICTAKTEWLDGKHVVFGKVKEGMNIVEAMERFGS 166 (184)
T ss_dssp CCBTTBSCBCCCCCCSCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC
T ss_pred CcccCCCcccCcccccccCCCcEEEEEeCCCCCcccEEEEEeCCchhhCCCceEEEEEecCHHHHHHHHhcCC
Confidence 457889999999999999999999999999999999999999987 899999999999999988877654
No 52
>1z81_A Cyclophilin; structural genomics, structural genomics consortium, SGC, isomerase; 2.80A {Plasmodium yoelii yoelii} SCOP: b.62.1.1
Probab=99.53 E-value=2e-15 Score=134.50 Aligned_cols=68 Identities=46% Similarity=0.655 Sum_probs=62.3
Q ss_pred CccccCcccccCcccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEE--EEeeeeeeeeecc
Q psy13279 130 GKSIYGNKFEDENFVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYY--IFLTRFTQMCQGG 197 (287)
Q Consensus 130 ~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~--~g~~vi~~m~QgG 197 (287)
+.++|+..+++|++.++|+++|+||||+.+|++++|||||++.+. ++|++||+|+ .+++++++|.+.+
T Consensus 136 g~siyg~~f~dE~~~l~h~~~G~LsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~eGmdVv~~I~~~~ 209 (229)
T 1z81_A 136 SLSIYGEKFDDENFDIKHDKEGLLSMANSGPNTNGCQFFITTKKCEWLDGKNVVFGRIIDNDSLLLLKKIENVS 209 (229)
T ss_dssp CCBTTBSCCCCCCCCSCCCSTTEEEECCSSSSCCCSCEEEESSCCGGGBTTBCEEEEECSHHHHHHHHHHHHSC
T ss_pred CCccCCCcccccccccccCCCcEEEeccCCCCCcccEEEEECCCCcccCCCeeEEEEEEecCcHHHHHHHHhCC
Confidence 457889999999999999999999999999999999999999987 8999999999 9999998777654
No 53
>3k2c_A Peptidyl-prolyl CIS-trans isomerase; ssgcid, NIH, niaid, SBRI, UW, decode, cytoplasm, rotamase, structural genomics; HET: PG5; 1.95A {Encephalitozoon cuniculi}
Probab=99.51 E-value=5.6e-15 Score=128.59 Aligned_cols=69 Identities=46% Similarity=0.693 Sum_probs=62.8
Q ss_pred CccccCcccccCcccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeeccc
Q psy13279 130 GKSIYGNKFEDENFVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGGD 198 (287)
Q Consensus 130 ~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgGd 198 (287)
+.++|+..+++|++.++|+++|+||||+.+|++++|||||++.+. ++|++||+|+++++++++|.+.+.
T Consensus 99 g~si~g~~f~dE~~~l~h~~~G~lsmAn~gp~t~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~t 171 (193)
T 3k2c_A 99 GRSIYGEKFPDENFELKHTKEGILSMANCGAHTNGSQFFITLGKTQWLDEKHVVFGEVVEGMDVVHKIAKYGS 171 (193)
T ss_dssp CCCTTSSCBCCCCCCSCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTTCC
T ss_pred CcccCCCcccccccccccCCCcEEEEEeCCCCCCccEEEEECCCCcccCCCccEEEEEeCCHHHHHHHHhcCC
Confidence 457889999999999999999999999999999999999999987 899999999999999988876554
No 54
>2c3b_A Ppiase, cyclophilin; isomerase, 3D domain swapping, misfolding, Asp F 11, allergen, rotamase; 1.85A {Aspergillus fumigatus} SCOP: b.62.1.1
Probab=99.51 E-value=7.6e-16 Score=131.81 Aligned_cols=69 Identities=48% Similarity=0.706 Sum_probs=41.9
Q ss_pred CccccCcccccCcccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEE--Eeeeeeeeeeccc
Q psy13279 130 GKSIYGNKFEDENFVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYI--FLTRFTQMCQGGD 198 (287)
Q Consensus 130 ~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~--g~~vi~~m~QgGd 198 (287)
+.++|+.++++|+..++|+++|+||||+.+|++++|||||++.+. ++|++||+|.. +++++++|.+.+.
T Consensus 79 g~si~g~~f~dE~~~~~h~~~G~lsmA~~gp~t~gSQFfIt~~~~~~LDg~~tvFG~Vv~~~G~dvv~~I~~~~t 153 (172)
T 2c3b_A 79 GRSIYGDKFADENFSRKHDKKGILSMANAGPNTNGSQFFITTAVTSWLDGKHVVFGEVADEKSYSVVKEIEALGS 153 (172)
T ss_dssp --------------CHHHHHTCEEEEC---------CEEEECSCCTTCCSCCEEEEEECSHHHHHHHHHHHTTCC
T ss_pred CcccCCCcccCcccccccCCCeEEEEeeCCCCCcccEEEEECCCCCccCCCeeEEEEEEecCCHHHHHHHHhCCC
Confidence 356889999999999999999999999999999999999999987 89999999999 9999988876543
No 55
>1ihg_A Cyclophilin 40; ppiase immunophilin tetratricopeptide, isomerase; 1.80A {Bos taurus} SCOP: a.118.8.1 b.62.1.1 PDB: 1iip_A
Probab=99.48 E-value=1.4e-14 Score=136.43 Aligned_cols=68 Identities=47% Similarity=0.642 Sum_probs=61.3
Q ss_pred CccccCcccccCcccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeecc
Q psy13279 130 GKSIYGNKFEDENFVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGG 197 (287)
Q Consensus 130 ~~~~~~~~~~~e~~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgG 197 (287)
+.++|+..+++|++.++|+++|+||||+.+|++++|||||++.+. ++|++||+|+.++.++..+.+.+
T Consensus 95 ~~~~~~~~~~~e~~~~~~~~~g~l~ma~~~~~~~~sqffi~~~~~~~ld~~~~vfG~v~~g~~v~~~i~~~~ 166 (370)
T 1ihg_A 95 GESIYGEKFEDENFHYKHDKEGLLSMANAGSNTNGSQFFITTVPTPHLDGKHVVFGQVIKGMGVAKILENVE 166 (370)
T ss_dssp CCBTTBSCBCCCCCCBCCCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSC
T ss_pred CCCCCCCCcCCCcCCcCCCCCeEEEEeeCCCCCCCceEEEeCCCCcccCCCceEEEEEecCHHHHHHHHcCC
Confidence 457899999999999999999999999999999999999999987 89999999999998886665543
No 56
>2ose_A Probable peptidyl-prolyl CIS-trans isomerase; cyclophilin; 2.04A {Mimivirus}
Probab=99.41 E-value=4.4e-14 Score=126.31 Aligned_cols=54 Identities=19% Similarity=0.191 Sum_probs=49.4
Q ss_pred cccccCCCceeccc----cCCCCCCCceeEEeee------c----cceeeeEEEEEEeeeeeeeeecc
Q psy13279 144 VLKHTGPGVLSMAN----SGPNTNGSQFFLCTTS------I----NKHYYYYYYYIFLTRFTQMCQGG 197 (287)
Q Consensus 144 ~~~h~~~G~l~ma~----~~~~s~~SqFfI~l~~------~----g~~~vfG~v~~g~~vi~~m~QgG 197 (287)
.++|+++|+||||+ .+|++++|||||++.+ . ++|++||+|+.+++++++|.+.+
T Consensus 120 ~l~h~~~G~lsMAn~~~~~gpntngSQFFIt~~~~~~~~g~p~LDg~~tVFG~Vv~GmdVv~~I~~~~ 187 (234)
T 2ose_A 120 FYPHESKGLLSLVPYTDESGNRYYDSTFMITLDDIRPSNVLDELDRDQVVIGQVYGGLDVLDKINSMI 187 (234)
T ss_dssp CCCSCSTTEEEECCEECTTSCEEBCSCEEEESSCCCTTSSGGGSCTTSEEEEEEEECHHHHHHHHHHT
T ss_pred CccCCCCCEEEEecccccCCCCCccceEEEEecCccccCCCcccCCCeeEEEEEeCCHHHHHHHHhCC
Confidence 68898999999999 8899999999999998 5 89999999999999998887754
No 57
>2fu0_A Cyclophilin, putative; PFE0505W, cyclosporin-binding domain, structura genomics, structural genomics consortium, SGC, unknown FUNC; 1.80A {Plasmodium falciparum} SCOP: b.62.1.1
Probab=99.30 E-value=7.1e-13 Score=112.06 Aligned_cols=67 Identities=43% Similarity=0.556 Sum_probs=60.5
Q ss_pred ccccCcccccCcc-cccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeecc
Q psy13279 131 KSIYGNKFEDENF-VLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGG 197 (287)
Q Consensus 131 ~~~~~~~~~~e~~-~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgG 197 (287)
.++|+.++++|+. .++|+++|+||||+.+|++++|||||++.+. ++|++||+|+++++++++|.+.+
T Consensus 69 ~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~ 140 (160)
T 2fu0_A 69 ESIWGNEFEDEFFDHLNHSKPFMVSMANCGPNTNGSQFFITTVPCPWLDFKHTVFGKVTQGSKIVLDIEKVR 140 (160)
T ss_dssp CCTTSSCBCCCCBTTBCSSSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSC
T ss_pred CcccCCCccccccCCcccCCceEEEEecCCCCCcccEEEEECCCCCccCCCcEEEEEEEcCHHHHHHHHhCC
Confidence 4678899999987 6899989999999999999999999999986 89999999999999998777654
No 58
>2x7k_A Peptidyl-prolyl CIS-trans isomerase-like 1; isomerase-immunosuppressant complex, immunosuppressant; HET: MLE MVA BMT ABA SAR; 1.15A {Homo sapiens} PDB: 1xwn_A
Probab=99.30 E-value=7.2e-13 Score=112.67 Aligned_cols=68 Identities=43% Similarity=0.608 Sum_probs=60.9
Q ss_pred CccccCcccccCc-ccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeecc
Q psy13279 130 GKSIYGNKFEDEN-FVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGG 197 (287)
Q Consensus 130 ~~~~~~~~~~~e~-~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgG 197 (287)
+.++|+..+++|+ ..++|+++|+||||+.+|++++|||||++.+. ++|++||+|.++++++++|.+.+
T Consensus 74 g~si~g~~~~dE~~~~l~h~~~G~lsmAn~gp~s~gSQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~ 146 (166)
T 2x7k_A 74 GASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMVE 146 (166)
T ss_dssp CCCTTSSCBCCCCCTTSCCCSTTEEEECBSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTSC
T ss_pred CCccCCCccccccccccCCCCCeEEEEeeCCCCCccceEEEECCCCCccCCCeeEEEEEEcCHHHHHHHHcCC
Confidence 4568899999997 58899999999999999999999999999987 89999999999999998777654
No 59
>1lop_A Cyclophilin A; rotamase, isomerase-isomerase inhibitor complex; HET: NIT; 1.80A {Escherichia coli} SCOP: b.62.1.1 PDB: 2nul_A 2rs4_A
Probab=99.29 E-value=7.3e-13 Score=112.39 Aligned_cols=64 Identities=14% Similarity=0.113 Sum_probs=53.4
Q ss_pred cCcccccCcccccccCCCceecccc-CCCCCCCceeEEeeec----cc--------eeeeEEEEEEeeeeeeeeecc
Q psy13279 134 YGNKFEDENFVLKHTGPGVLSMANS-GPNTNGSQFFLCTTSI----NK--------HYYYYYYYIFLTRFTQMCQGG 197 (287)
Q Consensus 134 ~~~~~~~e~~~~~h~~~G~l~ma~~-~~~s~~SqFfI~l~~~----g~--------~~vfG~v~~g~~vi~~m~QgG 197 (287)
|+.++++|+...+++++|+||||+. +|++++|||||++.+. ++ |++||+|.++++++++|.+.+
T Consensus 64 ~g~~~~dE~~~~l~~~~G~lsmA~~~~p~s~gSQFfI~~~~~~~Ld~~~~~~~~~~~tvFG~Vv~G~dvv~~I~~~~ 140 (164)
T 1lop_A 64 TKEPIKNEANNGLKNTRGTLAMARTQAPHSATAQFFINVVDNDFLNFSGESLQGWGYCVFAEVVDGMDEVDKIKGVA 140 (164)
T ss_dssp CCCCBCCCCCSSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTSCCCEEEEEEECHHHHHHHHTSC
T ss_pred CCCccccccccccccCccEEEEeecCCCCCccceEEEEcCCccccCCccccccCCceEEEEEEecCHHHHHHHHhCC
Confidence 3667889986544456999999975 6999999999999986 55 999999999999998777654
No 60
>2ok3_A Peptidyl-prolyl CIS-trans isomerase-like 3; beta-barrel, helix, disulfide bridge; 2.00A {Homo sapiens} SCOP: b.62.1.1 PDB: 1xyh_A 2oju_A*
Probab=99.29 E-value=9.2e-13 Score=111.45 Aligned_cols=68 Identities=44% Similarity=0.544 Sum_probs=60.8
Q ss_pred CccccCcccccCcc-cccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeecc
Q psy13279 130 GKSIYGNKFEDENF-VLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGG 197 (287)
Q Consensus 130 ~~~~~~~~~~~e~~-~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgG 197 (287)
+.++|+..+++|+. .++|+++|+||||+.+|++++|||||++.+. ++|++||+|.++++++++|.+..
T Consensus 63 g~si~g~~~~dE~~~~l~h~~~G~lsma~~gp~s~~SQFfI~~~~~~~Ldg~~tvFG~Vv~G~dvv~~I~~~~ 135 (161)
T 2ok3_A 63 GNSIWGKKFEDEYSEYLKHNVRGVVSMANNGPNTNGSQFFITYGKQPHLDMKYTVFGKVIDGLETLDELEKLP 135 (161)
T ss_dssp CCCTTSSCBCCCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTCC
T ss_pred CCcccCCccccccCcCcCcCCCeEEEEecCCCCCcceEEEEEcCCCCccCCCEeEEEEEeCCHHHHHHHHhCC
Confidence 35688999999975 7889999999999999999999999999987 89999999999999998777654
No 61
>2a2n_A Peptidylprolyl isomerase domain and WD repeat CON; CIS-trans isomerization, protein-folding, peptidylprolyl ISO structural genomics; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=99.28 E-value=1.1e-12 Score=112.45 Aligned_cols=68 Identities=41% Similarity=0.589 Sum_probs=61.0
Q ss_pred CccccCcccccCcc-cccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeecc
Q psy13279 130 GKSIYGNKFEDENF-VLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGG 197 (287)
Q Consensus 130 ~~~~~~~~~~~e~~-~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgG 197 (287)
+.++|+..+++|+. .++|+++|+||||+.+|++++|||||++.+. ++|++||+|+++++++++|.+.+
T Consensus 84 g~si~g~~~~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~ 156 (176)
T 2a2n_A 84 GESIWGGEFEDEFHSTLRHDRPYTLSMANAGSNTNGSQFFITVVPTPWLDNKHTVFGRVTKGMEVVQRISNVK 156 (176)
T ss_dssp CCCTTSSCBCCCCCTTCCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSC
T ss_pred CCcccCCccccccccccccCCceEEEEEeCCCCCcccEEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHcCC
Confidence 34688999999987 6899999999999999999999999999986 89999999999999998777654
No 62
>2poe_A Cyclophilin-like protein, putative; cryptosporidium parvum cyclophilin isomerase, structural genomics; 2.01A {Cryptosporidium parvum iowa II} PDB: 2qer_A
Probab=99.27 E-value=1.1e-12 Score=113.46 Aligned_cols=68 Identities=38% Similarity=0.528 Sum_probs=61.4
Q ss_pred CccccCcccccCc-ccccccCCCceeccccC----CCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeecc
Q psy13279 130 GKSIYGNKFEDEN-FVLKHTGPGVLSMANSG----PNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGG 197 (287)
Q Consensus 130 ~~~~~~~~~~~e~-~~~~h~~~G~l~ma~~~----~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgG 197 (287)
+.++|+.++++|+ ..++|+++|+||||+.+ |++++|||||++.+. ++|++||+|.++++++++|.+.+
T Consensus 79 g~si~g~~~~dE~~~~l~h~~~G~lsmA~~g~~~~p~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~ 155 (185)
T 2poe_A 79 GESIYGRYFDDEIYPELKYDRRGILSMASKGASKKPNTNGSQFFITYSSLPQLNGEYVIFGKLIDGFETLNTLENCP 155 (185)
T ss_dssp CCBTTBSCBCCCCCTTSCCCSTTEEEECCSCC-CCCSCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSC
T ss_pred CCccCCCcccccccCCCccCCCeEEEEecCCCCCCCCCccceEEEECCCCCccCCCeeEEEEEeCCHHHHHHHHhCC
Confidence 3468899999997 78899999999999998 999999999999987 89999999999999998887754
No 63
>2b71_A Cyclophilin-like protein; structural genomics, structural genomics consortium, SGC, isomerase; 2.50A {Plasmodium yoelii} SCOP: b.62.1.1
Probab=99.26 E-value=1.5e-12 Score=113.55 Aligned_cols=68 Identities=47% Similarity=0.689 Sum_probs=60.8
Q ss_pred CccccCcccccCc-ccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeecc
Q psy13279 130 GKSIYGNKFEDEN-FVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGG 197 (287)
Q Consensus 130 ~~~~~~~~~~~e~-~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgG 197 (287)
+.++|+.++++|. ..++|+++|+||||+.+|++++|||||++.+. ++|++||+|+.+++++++|.+.+
T Consensus 101 g~si~g~~~~dE~~~~l~h~~~G~lsMAn~gpns~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~ 173 (196)
T 2b71_A 101 GKSIYGEYFEDEINKELKHTGAGILSMSNNGPNTNSSQFFITLAPLPHLDGKHTIFARVSKNMTCIENIASVQ 173 (196)
T ss_dssp CCBTTBSCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHTSC
T ss_pred CCccCCCcccccccCCcCcCCCeEEEEccCCCCCcccEEEEECCCCCccCCCEeEEEEEecCHHHHHHHHhCC
Confidence 4568899999994 67899899999999999999999999999987 89999999999999998777654
No 64
>1zkc_A Peptidyl-prolyl CIS-trans isomerase like 2; CIS-trans isomerization, peptidylprolyl isomerase, protein- folding, structural genomics consortium; 1.65A {Homo sapiens} SCOP: b.62.1.1
Probab=99.25 E-value=1.9e-12 Score=112.93 Aligned_cols=68 Identities=44% Similarity=0.575 Sum_probs=61.1
Q ss_pred CccccCcccccC-cccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeecc
Q psy13279 130 GKSIYGNKFEDE-NFVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGG 197 (287)
Q Consensus 130 ~~~~~~~~~~~e-~~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgG 197 (287)
+.++|+.++++| +..++|+++|+||||+.+|++++|||||++.+. ++|++||+|+.+++++++|.+.+
T Consensus 82 g~si~g~~f~dE~~~~l~h~~~G~lsMAn~gp~sngSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~ 154 (197)
T 1zkc_A 82 GESYWGKPFKDEFRPNLSHTGRGILSMANSGPNSNRSQFFITFRSCAYLDKKHTIFGRVVGGFDVLTAMENVE 154 (197)
T ss_dssp CCBTTBSCBCCCCCTTCCSCSTTEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHHHSC
T ss_pred CCccCCCccccccCcCcCCCCceEEEEecCCCCCcccEEEEEcCCCCccCCCccEEEEEEcCHHHHHHHHcCC
Confidence 456889999999 478899999999999999999999999999986 89999999999999998777654
No 65
>3bo7_A Peptidyl-prolyl CIS-trans isomerase cyclophilin-T; isomerase-immunosuppressant complex, immunosuppressant, cyclophilin, structural G structural genomics consortium, SGC; HET: BMT; 2.35A {Toxoplasma gondii}
Probab=99.22 E-value=2.6e-12 Score=112.36 Aligned_cols=63 Identities=41% Similarity=0.451 Sum_probs=56.3
Q ss_pred CcccccC-cccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeecc
Q psy13279 135 GNKFEDE-NFVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQGG 197 (287)
Q Consensus 135 ~~~~~~e-~~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~QgG 197 (287)
+..+++| +..++|+++|+||||+.+|++++|||||++.+. ++|++||+|+.+++++++|.+.+
T Consensus 86 g~~f~dE~~~~l~h~~~G~lsmA~~gp~s~gSQFFIt~~~~~~LDg~~tVFG~Vv~Gmdvv~~I~~~~ 153 (201)
T 3bo7_A 86 GAPFEDEFDNRLVHQGIGVLSMANDGKHSNLSEFFITFKSCEHLNNKHTIFGRVVGGLDVLRQWEKLE 153 (201)
T ss_dssp CCCBCCCCCTTCCCCSTTEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEEEECHHHHHHHTTCC
T ss_pred CCcccCcccCCCCcCCCcEEEEeeCCCCCcccEEEEECCCCcccCCCceEEEEEecCHHHHHHHHhCC
Confidence 5678889 468889899999999999999999999999986 89999999999999997777654
No 66
>2k7n_A Peptidyl-prolyl CIS-trans isomerase-like 1; beta barrel, disorder-order transition, HOOK-like, mRNA processing, mRNA splicing, rotamase; NMR {Homo sapiens}
Probab=99.18 E-value=3.6e-12 Score=111.56 Aligned_cols=67 Identities=43% Similarity=0.621 Sum_probs=59.6
Q ss_pred CccccCcccccCc-ccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeeeeeeeeec
Q psy13279 130 GKSIYGNKFEDEN-FVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTRFTQMCQG 196 (287)
Q Consensus 130 ~~~~~~~~~~~e~-~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~vi~~m~Qg 196 (287)
+.++|+..+++|+ ..++|+++|+|+||+.+|++++|||||++.+. ++|++||+|+++++++++|.+.
T Consensus 74 g~si~g~~f~dE~~~~l~h~~~G~lsMAn~gpnsngSQFFIt~~~~~~LDg~~tVFG~VveGmdvv~kI~~~ 145 (203)
T 2k7n_A 74 GASIYGKQFEDELHPDLKFTGAGILAMANAGPDTNGSQFFVTLAPTQWLDGKHTIFGRVCQGIGMVNRVGMV 145 (203)
T ss_dssp CCTTSCSCBCCCCCCSSCCCSSCEEEEEESSTTCEEEEEEEESSCCCSSTTTSCEEEEEESCHHHHHHHHSC
T ss_pred CCccCCCcccccccccccCCCCeEEEEeeCCCCCcccEEEEEcCCCCccCCCeeEEEEEEcCHHHHHHHHcC
Confidence 3467889999997 58899999999999999999999999999986 8999999999999988766654
No 67
>1w74_A Peptidyl-prolyl CIS-trans isomerase A; cyclophilin, ppiase, RV0009, rotamase, structural proteomics in europe, spine; 2.6A {Mycobacterium tuberculosis} SCOP: b.62.1.1
Probab=99.12 E-value=9.8e-12 Score=107.89 Aligned_cols=61 Identities=33% Similarity=0.457 Sum_probs=54.6
Q ss_pred ccccC-cccccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEE--Eeeeeeeeeecc
Q psy13279 137 KFEDE-NFVLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYI--FLTRFTQMCQGG 197 (287)
Q Consensus 137 ~~~~e-~~~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~--g~~vi~~m~QgG 197 (287)
.+++| ++.++|+++|+||||+.+|++++|||||++.+. ++|++||+|+. +++++++|.+.+
T Consensus 105 ~f~dE~~~~l~h~~~G~lsMAn~gpntngSQFFIt~~~~~~LDg~~tVFG~Vv~~~Gmdvv~~I~~~~ 172 (191)
T 1w74_A 105 KFADEFHPELQFDKPYLLAMANAGPGTNGSQFFITVGKTPHLNRRHTIFGEVIDAESQRVVEAISKTA 172 (191)
T ss_dssp CBCCCCCTTCCSCSSSEEEECCSSTTCBSSCEEEESSCCGGGTTTSCEEEEECSHHHHHHHHHHHTSC
T ss_pred ccccccccCCCcCCCcEEEEeeCCCCCccceEEEEcCCCcccCCCeeEEEEEEECCCHHHHHHHHcCC
Confidence 36788 468899999999999999999999999999987 89999999999 999998777654
No 68
>3rfy_A Peptidyl-prolyl CIS-trans isomerase CYP38, chloro; cyclophilin, peptidyl prolyl isomerase, ppiase, TLP,; 2.39A {Arabidopsis thaliana}
Probab=99.09 E-value=6e-11 Score=112.09 Aligned_cols=67 Identities=18% Similarity=0.272 Sum_probs=58.0
Q ss_pred ccccCcccccCcc-----cccccCCCceecccc--CCCCCCCceeEEeee-------c----cceeeeEEEEEEeeeeee
Q psy13279 131 KSIYGNKFEDENF-----VLKHTGPGVLSMANS--GPNTNGSQFFLCTTS-------I----NKHYYYYYYYIFLTRFTQ 192 (287)
Q Consensus 131 ~~~~~~~~~~e~~-----~~~h~~~G~l~ma~~--~~~s~~SqFfI~l~~-------~----g~~~vfG~v~~g~~vi~~ 192 (287)
.++|+..+++|++ .++|+++|+||||+. +||+++|||||++.+ . ++|++||+|+.+++++++
T Consensus 262 ~piyg~~fedegf~~~~~~L~h~~~G~LsMAns~~gPnSngSQFFItl~d~~L~~~~~~~LDgkytVFG~VveGmdVVdk 341 (369)
T 3rfy_A 262 TPFYGSTLEELGLYKAQVVIPFNAFGTMAMAREEFENDSGSSQVFWLLKESELTPSNSNILDGRYAVFGYVTDNEDFLAD 341 (369)
T ss_dssp CSCCCSSTGGGTEEEEEEEECCCCCCCCCCSSCCCCCCCSSCCCCCCCEEEEECSCCCSSSCSCEEEEEEEEESTTGGGG
T ss_pred CCcCCCccccccccccccccccCCCceEEEeecCCCCCCccceEEEEecccccCCCCCcccCCCeeEEEEEecCHHHHHH
Confidence 4578888888853 788999999999998 799999999999953 1 899999999999999988
Q ss_pred eeecc
Q psy13279 193 MCQGG 197 (287)
Q Consensus 193 m~QgG 197 (287)
|.++.
T Consensus 342 I~~GD 346 (369)
T 3rfy_A 342 LKVGD 346 (369)
T ss_dssp CCTTC
T ss_pred HhCCC
Confidence 87753
No 69
>2hq6_A Serologically defined colon cancer antigen 10; protein folding, peptidyl-prolyl CIS-trans isomerase, struct genomics; 1.75A {Homo sapiens}
Probab=99.04 E-value=1.3e-10 Score=100.28 Aligned_cols=59 Identities=41% Similarity=0.567 Sum_probs=51.9
Q ss_pred CccccCcccccCcc-cccccCCCceeccccCCCCCCCceeEEeeec----cceeeeEEEEEEeee
Q psy13279 130 GKSIYGNKFEDENF-VLKHTGPGVLSMANSGPNTNGSQFFLCTTSI----NKHYYYYYYYIFLTR 189 (287)
Q Consensus 130 ~~~~~~~~~~~e~~-~~~h~~~G~l~ma~~~~~s~~SqFfI~l~~~----g~~~vfG~v~~g~~v 189 (287)
+.++|+.++++|+. .++|+++|+||||+.++++++|||||++.+. ++|++||+|. ++.+
T Consensus 87 g~si~g~~~~dE~~~~l~h~~~G~lsMA~~g~~s~gSQFFIt~~~~~~LDg~~tVFG~V~-G~~v 150 (185)
T 2hq6_A 87 GESIYGAPFKDEFHSRLRFNRRGLVAMANAGSHDNGSQFFFTLGRADELNNKHTIFGKVT-GDTV 150 (185)
T ss_dssp CCCTTSSCBCCCCBTTBCSCSSSEEEECCSSTTCBCSCEEEESSCCGGGTTTSCEEEEEC-GGGH
T ss_pred CCcccCCccccccccCcccCCCeEEEEccCCCCCccceEEEECCCCCccCCCceEEEEEE-eCee
Confidence 34678999999975 6889999999999999999999999999986 8999999998 6544
No 70
>1v9t_A Cyclophilin B; beta barrel, isomerase-isomerase inhibitor complex; HET: NIT; 1.70A {Escherichia coli} SCOP: b.62.1.1 PDB: 1j2a_A* 1vai_A* 1clh_A
Probab=99.02 E-value=7.1e-11 Score=100.28 Aligned_cols=61 Identities=15% Similarity=0.092 Sum_probs=52.4
Q ss_pred ccccCcccccccCCCceecccc-CCCCCCCceeEEeeec----cc-----eeeeEEEEEEeeeeeeeeecc
Q psy13279 137 KFEDENFVLKHTGPGVLSMANS-GPNTNGSQFFLCTTSI----NK-----HYYYYYYYIFLTRFTQMCQGG 197 (287)
Q Consensus 137 ~~~~e~~~~~h~~~G~l~ma~~-~~~s~~SqFfI~l~~~----g~-----~~vfG~v~~g~~vi~~m~QgG 197 (287)
++++|+...+|+++|+||||+. +|++++|||||++.+. ++ |++||+|+++++++++|.+.+
T Consensus 72 ~~~dE~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~tvFG~Vv~G~dvv~~I~~~~ 142 (166)
T 1v9t_A 72 PIKNEADNGLRNTRGTIAMARTADKDSATSQFFINVADNAFLDHGQRDFGYAVFGKVVKGMDVADKISQVP 142 (166)
T ss_dssp CBCCCGGGSCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSCCCCCEEEEEEECHHHHHHHHTSC
T ss_pred cccccccccccCCceEEEEeecCCCCCccceEEEEeCCccccCCccCcCCeeEEEEEecCHHHHHHHHhCC
Confidence 4778876666777999999997 5999999999999987 55 999999999999998777654
No 71
>3s6m_A Peptidyl-prolyl CIS-trans isomerase; seattle structural genomics center for infectious disease; 1.65A {Burkholderia pseudomallei} SCOP: b.62.1.1 PDB: 3t1u_A*
Probab=98.98 E-value=1.4e-10 Score=98.55 Aligned_cols=62 Identities=11% Similarity=0.036 Sum_probs=51.4
Q ss_pred cccccCcccccccCCCceeccc-cCCCCCCCceeEEeeec----cc--------eeeeEEEEEEeeeeeeeeecc
Q psy13279 136 NKFEDENFVLKHTGPGVLSMAN-SGPNTNGSQFFLCTTSI----NK--------HYYYYYYYIFLTRFTQMCQGG 197 (287)
Q Consensus 136 ~~~~~e~~~~~h~~~G~l~ma~-~~~~s~~SqFfI~l~~~----g~--------~~vfG~v~~g~~vi~~m~QgG 197 (287)
.++++|....+++++|+||||+ .+|++++|||||++.+. ++ |++||+|.++++++++|.+.+
T Consensus 70 ~~~~~E~~~~l~~~~G~lsmA~~~~p~t~gSQFfI~~~~~~~Ld~~~~~~~~~~~~VFG~Vv~G~dvv~~I~~~~ 144 (167)
T 3s6m_A 70 APIANEANNGLKNDTYTIAMARTNDPHSATAQFFINVNDNEFLNHSSPTPQGWGYAVFGKVVEGQDIVDKIKAVK 144 (167)
T ss_dssp CCBCCCGGGCCCCCTTEEEECCCSSTTCBCSCEEEESSCCGGGSCCSSSTTTCCCCEEEEEEECHHHHHHHTTSC
T ss_pred CccCCcccccccCCccEEEEecCCCCCCccceEEEEcCCchhcCCcccccCCCCceEEEEEEcCHHHHHHHHcCC
Confidence 3567776555555799999999 56999999999999886 55 999999999999998777754
No 72
>3bkp_A Cyclophilin; malaria, isomerase, structural GENO structural genomics consortium, SGC; 1.80A {Toxoplasma gondii}
Probab=98.87 E-value=1.2e-09 Score=97.48 Aligned_cols=42 Identities=29% Similarity=0.294 Sum_probs=35.4
Q ss_pred ccCCCceeccccCC--------------CCCCCceeEEeeec----cceeeeEEEEEEeee
Q psy13279 147 HTGPGVLSMANSGP--------------NTNGSQFFLCTTSI----NKHYYYYYYYIFLTR 189 (287)
Q Consensus 147 h~~~G~l~ma~~~~--------------~s~~SqFfI~l~~~----g~~~vfG~v~~g~~v 189 (287)
|+.+|+||||+.++ ++++|||||++.+. ++|++||+|. ++.+
T Consensus 104 h~~~G~lsMA~~g~~~~~~~n~e~g~~~~sngSQFFIt~~~~p~LDg~~tVFG~Vv-g~~v 163 (232)
T 3bkp_A 104 FRYRGLVGVANLGRSSKDAENDERGRSLGTNGNQFFITLARADVLNNAYTLFGKVT-GHTL 163 (232)
T ss_dssp CCSTTEEEECCCC----------------CBCSCEEEESSCCGGGTTTSCEEEEEC-GGGH
T ss_pred cCCCeEEEEeccCCcccccccccccccCCCcCCEEEEECCCCcccCCCccEEEEEE-eCch
Confidence 66799999999986 69999999999986 8999999998 5543
No 73
>2nnz_A Hypothetical protein; beta-barrel, structural genomics, ontario centre for structu proteomics, OCSP, unknown function; NMR {Archaeoglobus fulgidus}
Probab=53.32 E-value=7.7 Score=31.73 Aligned_cols=23 Identities=13% Similarity=0.166 Sum_probs=21.0
Q ss_pred eEEEEEEeCCCChHHHHHHHHHH
Q psy13279 11 GRITIQLRYDLVPRTAENFRCLC 33 (287)
Q Consensus 11 G~i~ieL~~~~aP~~~~nF~~L~ 33 (287)
..++++|+.+.||+||+.|+++-
T Consensus 39 ~~~~a~L~D~~aP~Ta~~f~~~L 61 (153)
T 2nnz_A 39 AECEVELYEEWAPETVRAIADAL 61 (153)
T ss_dssp EEEEECCCTTSCHHHHHHHHHTC
T ss_pred EEEEEEEcCCCCHHHHHHHHHhC
Confidence 56999999999999999999975
No 74
>3kop_A Uncharacterized protein; protein with A cyclophilin-like fold, structural genomics, J center for structural genomics, JCSG; 1.90A {Arthrobacter SP}
Probab=53.24 E-value=7.2 Score=32.96 Aligned_cols=27 Identities=22% Similarity=0.187 Sum_probs=22.2
Q ss_pred ceEeeE-EEEEEeCCCChHHHHHHHHHH
Q psy13279 7 KQEVGR-ITIQLRYDLVPRTAENFRCLC 33 (287)
Q Consensus 7 ~t~~G~-i~ieL~~~~aP~~~~nF~~L~ 33 (287)
-+..|- ++.+|..|.||+||+.|.++-
T Consensus 28 l~~~g~~~~A~Lldd~APkTcaA~~~~L 55 (188)
T 3kop_A 28 LEKRGVTCKALLLDDVAPRTSKAVWDAL 55 (188)
T ss_dssp ETTTTEEEEEEECTTTSHHHHHHHHHHC
T ss_pred EecCCeEEEEEEccccChHHHHHHHHhC
Confidence 334453 889999999999999999975
No 75
>2k9u_B Filamin-binding LIM protein 1; cytoskeletal complex, alternative splicing, cell adhesion, cell junction, cell shape, cytoplasm, cytoskeleton; NMR {Homo sapiens}
Probab=22.64 E-value=45 Score=18.88 Aligned_cols=22 Identities=18% Similarity=0.250 Sum_probs=13.9
Q ss_pred ccccCCCCCCCceeEEeeeccc
Q psy13279 155 MANSGPNTNGSQFFLCTTSINK 176 (287)
Q Consensus 155 ma~~~~~s~~SqFfI~l~~~g~ 176 (287)
||+.......|..||+|.+..+
T Consensus 1 ma~kpeKR~aSSvFITLapp~r 22 (26)
T 2k9u_B 1 MASKPEKRVASSVFITLAPPRR 22 (26)
T ss_dssp CCCCSSSSCEEEEEEEECCSSC
T ss_pred CCCcchhheeeeEEEEecCccc
Confidence 4443344556778999987643
Done!