Query psy13283
Match_columns 124
No_of_seqs 168 out of 969
Neff 6.7
Searched_HMMs 29240
Date Fri Aug 16 15:31:07 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13283.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13283hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 3edh_A Bone morphogenetic prot 100.0 4.1E-42 1.4E-46 258.6 9.5 96 1-96 102-201 (201)
2 3lqb_A Hatching enzyme, LOC792 100.0 3.5E-41 1.2E-45 253.4 8.9 91 1-94 108-199 (199)
3 3lq0_A Proastacin; metallopept 100.0 1.6E-40 5.4E-45 255.2 7.0 94 1-96 135-232 (235)
4 4gwm_A Meprin A subunit beta; 100.0 5.1E-39 1.7E-43 272.8 8.2 113 1-113 139-252 (592)
5 2y6d_A Matrilysin; hydrolase; 94.4 0.029 1E-06 40.2 3.3 21 78-98 151-171 (174)
6 1hv5_A Stromelysin 3; inhibiti 92.9 0.13 4.5E-06 36.2 4.5 19 77-95 146-164 (165)
7 1cge_A Fibroblast collagenase; 81.2 1.8 6E-05 30.4 4.0 18 78-95 145-162 (168)
8 1su3_A Interstitial collagenas 80.4 1.6 5.4E-05 35.6 4.0 37 42-97 210-246 (450)
9 2v52_M MKL/myocardin-like prot 57.4 0.64 2.2E-05 24.6 -2.1 18 2-22 11-28 (32)
10 3ba0_A Macrophage metalloelast 56.3 14 0.00048 29.0 4.6 18 78-95 143-160 (365)
11 2jsd_A Matrix metalloproteinas 56.1 11 0.00038 25.6 3.5 16 78-93 144-159 (160)
12 3ma2_D Matrix metalloproteinas 53.9 15 0.00053 26.1 4.1 20 78-97 158-177 (181)
13 1rm8_A MMP-16, matrix metallop 50.3 20 0.00068 24.7 4.1 16 78-93 153-168 (169)
14 1g9k_A Serralysin; beta jelly 48.9 19 0.00064 29.3 4.3 20 78-97 229-248 (463)
15 1sat_A Serratia protease; para 48.6 19 0.00065 29.3 4.3 20 78-97 232-251 (471)
16 1k7i_A PROC, secreted protease 43.6 25 0.00085 28.7 4.2 20 78-97 244-263 (479)
17 1kap_P Alkaline protease; calc 34.2 43 0.0015 27.3 4.2 20 78-97 241-260 (479)
18 2xs4_A Karilysin protease; hyd 27.9 34 0.0012 23.4 2.3 17 79-95 149-165 (167)
19 3mp7_B Preprotein translocase 27.8 6.6 0.00023 23.5 -1.3 11 5-15 23-33 (61)
20 1hy7_A Stromelysin-1, MMP-3; m 25.5 46 0.0016 23.0 2.6 18 78-95 150-167 (173)
21 3ayu_A 72 kDa type IV collagen 23.0 43 0.0015 23.1 2.0 18 78-95 148-165 (167)
22 2ovx_A Matrix metalloproteinas 21.5 50 0.0017 22.5 2.1 15 78-92 145-159 (159)
23 1y93_A Macrophage metalloelast 20.4 53 0.0018 22.4 2.1 16 78-93 144-159 (159)
24 1c7k_A NCNP, zinc endoprotease 20.2 95 0.0032 21.0 3.3 15 79-93 116-130 (132)
No 1
>3edh_A Bone morphogenetic protein 1; vicinal disulfide, alternative splicing, calcium, chondrogenesis, cleavage on PAIR of basic residues, cytokine; 1.25A {Homo sapiens} SCOP: d.92.1.0 PDB: 3edg_A 3edi_A
Probab=100.00 E-value=4.1e-42 Score=258.60 Aligned_cols=96 Identities=29% Similarity=0.445 Sum_probs=90.4
Q ss_pred CcccCCcCCCCceEEeccCcccchhhhhccccCCCccCCCcccccccCCCCCCCcccCC-CCCeEEecCCCC---ccCCc
Q psy13283 1 MHLKKNLAWRTAVRLDIKFLVSAYWNDFGKASPKDVSDYGVPYDFQSVMHYPAKAFSKN-GKDTIVAKKDPK---AILGQ 76 (124)
Q Consensus 1 ~HEh~RpDRD~yV~I~~~NI~~~~~~nF~k~~~~~~~~~g~pYDy~SVMHY~~~afs~~-g~~Ti~~~~~~~---~~iGq 76 (124)
||||+|||||+||+|+|+||.|+.++||.|++..++.++|+||||+|||||+++|||++ ++|||+|+.+.. ..|||
T Consensus 102 ~HE~~R~DRD~yV~I~~~ni~~~~~~nF~k~~~~~~~~~g~~YDy~SvMHY~~~aFs~~~~~~Ti~p~~~~~~~~~~iGq 181 (201)
T 3edh_A 102 WHEHTRPDRDRHVSIVRENIQPGQEYNFLKMEPQEVESLGETYDFDSIMHYARNTFSRGIFLDTIVPKYEVNGVKPPIGQ 181 (201)
T ss_dssp CCGGGSTTGGGTEEECGGGBCTTCGGGGCCCCGGGBCCTTCCCCTTCTTCCCTTTTBSSTTSCSEEESSCBTTBCCCCCC
T ss_pred hhhhhhhccCcEEEEehhccCcchhHhhhcCChhhccccCCccCCCCcccCCCccccCCCCCCceEeCCCCCcccccCcc
Confidence 79999999999999999999999999999999988999999999999999999999997 699999976543 68999
Q ss_pred CCCCCHHHHHHHHhhCCCCC
Q psy13283 77 RRGATEGDLEKVRQMYCKKN 96 (124)
Q Consensus 77 r~~lS~~Di~~IN~lY~C~~ 96 (124)
|.+||+.||++||+||+|+.
T Consensus 182 r~~lS~~Di~~in~lY~C~~ 201 (201)
T 3edh_A 182 RTRLSKGDIAQARKLYKCPA 201 (201)
T ss_dssp CSSCCHHHHHHHHHHTTCCC
T ss_pred cCCCCHHHHHHHHHhcCCCC
Confidence 99999999999999999974
No 2
>3lqb_A Hatching enzyme, LOC792177 protein; hydrolase, metalloprotease, astacin, metal- protease; 1.10A {Danio rerio}
Probab=100.00 E-value=3.5e-41 Score=253.39 Aligned_cols=91 Identities=26% Similarity=0.450 Sum_probs=86.7
Q ss_pred CcccCCcCCCCceEEeccCcccchhhhhccccCCCccCCCcccccccCCCCCCCcccCC-CCCeEEecCCCCccCCcCCC
Q psy13283 1 MHLKKNLAWRTAVRLDIKFLVSAYWNDFGKASPKDVSDYGVPYDFQSVMHYPAKAFSKN-GKDTIVAKKDPKAILGQRRG 79 (124)
Q Consensus 1 ~HEh~RpDRD~yV~I~~~NI~~~~~~nF~k~~~~~~~~~g~pYDy~SVMHY~~~afs~~-g~~Ti~~~~~~~~~iGqr~~ 79 (124)
||||+|||||+||+|+|+||.|+.++||.|.. +.++|+||||+|||||+++|||++ |+|||+|+.++..+||||.+
T Consensus 108 ~HEh~R~DRD~yV~I~~~nI~~~~~~nF~k~~---~~~~~~pYDy~SvMHY~~~aFs~n~g~~Ti~~~~~~~~~iGqr~~ 184 (199)
T 3lqb_A 108 YHEQSRSDRDQYVRINWNNISPGMAYNFLKQK---TNNQNTPYDYGSLMHYGKTAFAIQPGLETITPIPDENVQIGQRQG 184 (199)
T ss_dssp CCGGGSTTGGGTEEECGGGBCTTCGGGGCCCC---BCCTTCCCCTTCTTCCCTTTTBSSTTCCSEEESSCTTSCCCCCSS
T ss_pred ceeeeccCcCceEEeehhhcCcchhhhccccc---ccccCCcCCCCcccCCCCcccccCCCCCeEEECCCCCCCcccccC
Confidence 79999999999999999999999999999986 367899999999999999999999 89999998677889999999
Q ss_pred CCHHHHHHHHhhCCC
Q psy13283 80 ATEGDLEKVRQMYCK 94 (124)
Q Consensus 80 lS~~Di~~IN~lY~C 94 (124)
||+.||++||+||+|
T Consensus 185 lS~~Di~~in~lY~C 199 (199)
T 3lqb_A 185 LSKIDILRINKLYGC 199 (199)
T ss_dssp CCHHHHHHHHHHHTC
T ss_pred CCHHHHHHHHHhcCC
Confidence 999999999999999
No 3
>3lq0_A Proastacin; metallopeptidase, zymogen activation, proenzyme, protease, D bond, hydrolase, metal-binding, metalloprotease, zymogen; 1.45A {Astacus astacus} PDB: 1iab_A 1iaa_A 1ast_A 1iac_A 1iad_A 1iae_A 1qji_A* 1qjj_A
Probab=100.00 E-value=1.6e-40 Score=255.22 Aligned_cols=94 Identities=15% Similarity=0.219 Sum_probs=88.3
Q ss_pred CcccCCcCCCCceEEeccCcccchhhhhccccCCCccCCCcccccccCCCCCCCcccCC-CCCeEEecCCCCc---cCCc
Q psy13283 1 MHLKKNLAWRTAVRLDIKFLVSAYWNDFGKASPKDVSDYGVPYDFQSVMHYPAKAFSKN-GKDTIVAKKDPKA---ILGQ 76 (124)
Q Consensus 1 ~HEh~RpDRD~yV~I~~~NI~~~~~~nF~k~~~~~~~~~g~pYDy~SVMHY~~~afs~~-g~~Ti~~~~~~~~---~iGq 76 (124)
||||+|||||+||+|+|+||.++.++||.|++.. .++|+||||+|||||+++|||++ |+|||+|++++.. +|||
T Consensus 135 ~HEhsR~DRD~yV~I~~~nI~~~~~~nF~k~~~~--~~~g~pYDy~SvMHY~~~aFs~n~g~~Ti~~~~~~~~~~~~iGq 212 (235)
T 3lq0_A 135 YHEHTRMDRDNYVTINYQNVDPSMTSNFDIDTYS--RYVGEDYQYYSIMHYGKYSFSIQWGVLETIVPLQNGIDLTDPYD 212 (235)
T ss_dssp CCGGGSTTGGGTEEECGGGBCTTSGGGGCCCTTS--CCCCSCCCTTCTTCCCTTTTBTTTTTSCSEEESSTTCCCCCGGG
T ss_pred ceeeecccccceeEeehhccCcchHHHhccCCcc--ccCCCcCCCCcccCCCCcccccCCCCCcEEECCCCCcccccccc
Confidence 7999999999999999999999999999999875 78999999999999999999999 8999999866655 8999
Q ss_pred CCCCCHHHHHHHHhhCCCCC
Q psy13283 77 RRGATEGDLEKVRQMYCKKN 96 (124)
Q Consensus 77 r~~lS~~Di~~IN~lY~C~~ 96 (124)
|.+||+.||++||+||+|+.
T Consensus 213 r~~lS~~Di~~in~lY~C~c 232 (235)
T 3lq0_A 213 KAHMLQTDANQINNLYTNEC 232 (235)
T ss_dssp CSSCCHHHHHHHHHHTHHHH
T ss_pred cCCCCHHHHHHHHHhcCCCC
Confidence 99999999999999999953
No 4
>4gwm_A Meprin A subunit beta; mulidomain structure, hydrolase; HET: NAG BMA FUC MAN; 1.85A {Homo sapiens} PDB: 4gwn_A*
Probab=100.00 E-value=5.1e-39 Score=272.76 Aligned_cols=113 Identities=26% Similarity=0.328 Sum_probs=94.0
Q ss_pred CcccCCcCCCCceEEeccCcccchhhhhccccCCCccCCCcccccccCCCCCCCcccCCCCCeEEecCC-CCccCCcCCC
Q psy13283 1 MHLKKNLAWRTAVRLDIKFLVSAYWNDFGKASPKDVSDYGVPYDFQSVMHYPAKAFSKNGKDTIVAKKD-PKAILGQRRG 79 (124)
Q Consensus 1 ~HEh~RpDRD~yV~I~~~NI~~~~~~nF~k~~~~~~~~~g~pYDy~SVMHY~~~afs~~g~~Ti~~~~~-~~~~iGqr~~ 79 (124)
||||+|||||+||+|+|+||.++.++||.|+....+.++|+||||+|||||+++|||++++|||+|+.. ...+||||.+
T Consensus 139 ~HEqsR~DRD~yV~I~~~NI~~~~~~nF~k~~~~~~~~~g~pYDy~SVMHY~~~aFs~~~~~Ti~~~~~~~~~~iGqr~~ 218 (592)
T 4gwm_A 139 WHEQSRSDRDDYVRIMWDRILSGREHNFNTYSDDISDSLNVPYDYTSVMHYSKTAFQNGTEPTIVTRISDFEDVIGQRMD 218 (592)
T ss_dssp CCSTTSTTGGGTEEECGGGBCTTCGGGGCCCCC------CCCCCTTCTTSCCTTTTBSSSSCSEEESSGGGTTTTTCCSS
T ss_pred cccccCcCccceEEEehhhcCcchhhHHhhcCccccccCCCCcCCCccCcCCCCccccCCcceEEecCCCccCCcccccc
Confidence 799999999999999999999999999999999888999999999999999999999999999999653 4678999999
Q ss_pred CCHHHHHHHHhhCCCCCCCCCCChhhhccCccch
Q psy13283 80 ATEGDLEKVRQMYCKKNANTDDGLDEVEDNRLLD 113 (124)
Q Consensus 80 lS~~Di~~IN~lY~C~~~~~~~g~~~~~~~~~~~ 113 (124)
||+.||++||+||+|+.+++....-+++...+|+
T Consensus 219 lS~~Di~~iN~lY~C~~~~~~~~~C~FE~~d~Cg 252 (592)
T 4gwm_A 219 FSDSDLLKLNQLYNCSSSLSFMDSCSFELENVCG 252 (592)
T ss_dssp CCHHHHHHHHHHTTCSCCSSEEEEECCCSTTGGG
T ss_pred CcHHHHHHHHHhcCCCCccccccCCCcccccccC
Confidence 9999999999999999998743333333334443
No 5
>2y6d_A Matrilysin; hydrolase; HET: TQJ; 1.60A {Homo sapiens} PDB: 2ddy_A* 1mmq_A* 1mmp_A* 1mmr_A* 2y6c_A*
Probab=94.42 E-value=0.029 Score=40.18 Aligned_cols=21 Identities=14% Similarity=0.438 Sum_probs=14.0
Q ss_pred CCCCHHHHHHHHhhCCCCCCC
Q psy13283 78 RGATEGDLEKVRQMYCKKNAN 98 (124)
Q Consensus 78 ~~lS~~Di~~IN~lY~C~~~~ 98 (124)
..|+..||..|+.||+|+...
T Consensus 151 ~~l~~~Di~~i~~lYg~~~~~ 171 (174)
T 2y6d_A 151 FKLSQDDIKGIQKLYGKRSNS 171 (174)
T ss_dssp CCCCHHHHHHHHHHC------
T ss_pred CCCCHHHHHHHHHHhCcCCCC
Confidence 469999999999999987754
No 6
>1hv5_A Stromelysin 3; inhibition, phosphinic inhibitor, hydrolase; HET: CPS RXP; 2.60A {Mus musculus} SCOP: d.92.1.11
Probab=92.87 E-value=0.13 Score=36.21 Aligned_cols=19 Identities=11% Similarity=0.274 Sum_probs=15.4
Q ss_pred CCCCCHHHHHHHHhhCCCC
Q psy13283 77 RRGATEGDLEKVRQMYCKK 95 (124)
Q Consensus 77 r~~lS~~Di~~IN~lY~C~ 95 (124)
...|+..||..|+.||+|+
T Consensus 146 ~~~l~~~Di~~iq~LYg~~ 164 (165)
T 1hv5_A 146 PLSLSPDDRRGIQHLYGRP 164 (165)
T ss_dssp SCCCCHHHHHHHHHHCC--
T ss_pred CCCCCHHHHHHHHHHhCCC
Confidence 3579999999999999875
No 7
>1cge_A Fibroblast collagenase; hydrolase (metalloprotease); 1.90A {Homo sapiens} SCOP: d.92.1.11 PDB: 2j0t_A 1ayk_A 1hfc_A* 2ayk_A 2tcl_A* 3ayk_A* 4ayk_A* 1cgl_A* 1cgf_A 966c_A* 3shi_A
Probab=81.16 E-value=1.8 Score=30.39 Aligned_cols=18 Identities=11% Similarity=0.423 Sum_probs=14.9
Q ss_pred CCCCHHHHHHHHhhCCCC
Q psy13283 78 RGATEGDLEKVRQMYCKK 95 (124)
Q Consensus 78 ~~lS~~Di~~IN~lY~C~ 95 (124)
..|+..||..|+.||..+
T Consensus 145 ~~l~~~Di~~i~~lYg~~ 162 (168)
T 1cge_A 145 VQLAQDDIDGIQAIYGRS 162 (168)
T ss_dssp CCCCHHHHHHHHHHHCC-
T ss_pred CCCCHHHHHHHHHHhCcC
Confidence 369999999999999654
No 8
>1su3_A Interstitial collagenase; prodomain, hemopexin domain, exocite, structural proteomics in europe, spine, structural genomics, hydrolase; HET: EPE; 2.20A {Homo sapiens} SCOP: a.20.1.2 b.66.1.1 d.92.1.11 PDB: 2clt_A 1fbl_A*
Probab=80.37 E-value=1.6 Score=35.61 Aligned_cols=37 Identities=24% Similarity=0.578 Sum_probs=26.7
Q ss_pred ccccccCCCCCCCcccCCCCCeEEecCCCCccCCcCCCCCHHHHHHHHhhCCCCCC
Q psy13283 42 PYDFQSVMHYPAKAFSKNGKDTIVAKKDPKAILGQRRGATEGDLEKVRQMYCKKNA 97 (124)
Q Consensus 42 pYDy~SVMHY~~~afs~~g~~Ti~~~~~~~~~iGqr~~lS~~Di~~IN~lY~C~~~ 97 (124)
.-|.+||| |+.+.++ + ...|+..||..|+.||.|...
T Consensus 210 ~~~~~svM-~p~y~~~-----------------~-~~~l~~~Di~~i~~lYg~~~~ 246 (450)
T 1su3_A 210 STDIGALM-YPSYTFS-----------------G-DVQLAQDDIDGIQAIYGRSQN 246 (450)
T ss_dssp CSCTTSTT-SSBCCCC-----------------S-SCCCCHHHHHHHHHHHCCCSC
T ss_pred CCCCccee-ccccccC-----------------C-cCCCCHHHHHHHHHHhCCCCC
Confidence 34778888 6655431 1 346899999999999988643
No 9
>2v52_M MKL/myocardin-like protein 1; structural protein/contractIle protein, structural protein, contractIle protein, nucleotide-binding; HET: LAB ATP; 1.45A {Mus musculus}
Probab=57.44 E-value=0.64 Score=24.61 Aligned_cols=18 Identities=11% Similarity=0.226 Sum_probs=12.5
Q ss_pred cccCCcCCCCceEEeccCccc
Q psy13283 2 HLKKNLAWRTAVRLDIKFLVS 22 (124)
Q Consensus 2 HEh~RpDRD~yV~I~~~NI~~ 22 (124)
|-.+||||++-|. .||.+
T Consensus 11 kl~~RPdR~eLV~---~~IL~ 28 (32)
T 2v52_M 11 KIRSRPERAELVR---MHILE 28 (32)
T ss_dssp HHHTCCCHHHHHH---TTSSC
T ss_pred HHHcCCCHHHHHH---hcCCC
Confidence 4568999998765 45544
No 10
>3ba0_A Macrophage metalloelastase; FULL-length MMP-12, hemopexin domain, catalytic domain, domain interaction., calcium, extracellular matrix; 3.00A {Homo sapiens} PDB: 2jxy_A
Probab=56.31 E-value=14 Score=28.97 Aligned_cols=18 Identities=11% Similarity=0.303 Sum_probs=15.6
Q ss_pred CCCCHHHHHHHHhhCCCC
Q psy13283 78 RGATEGDLEKVRQMYCKK 95 (124)
Q Consensus 78 ~~lS~~Di~~IN~lY~C~ 95 (124)
..|+..||..|+.||.++
T Consensus 143 ~~l~~~Di~~iq~lYg~~ 160 (365)
T 3ba0_A 143 FRLSADDIRGIQSLYGDP 160 (365)
T ss_dssp CCCCHHHHHHHHSSSCSC
T ss_pred CCCCHHHHHHHHHhhCCC
Confidence 468999999999999873
No 11
>2jsd_A Matrix metalloproteinase-20; MMP-NNGH, structural genomics, structural proteomics in europe, spine, spine-2, spine2-complexes, hydrolase; HET: NGH; NMR {Homo sapiens}
Probab=56.06 E-value=11 Score=25.62 Aligned_cols=16 Identities=13% Similarity=0.318 Sum_probs=14.0
Q ss_pred CCCCHHHHHHHHhhCC
Q psy13283 78 RGATEGDLEKVRQMYC 93 (124)
Q Consensus 78 ~~lS~~Di~~IN~lY~ 93 (124)
..|+..||..|+.||.
T Consensus 144 ~~l~~~Di~~iq~LYg 159 (160)
T 2jsd_A 144 FHLPKDDVKGIQALYG 159 (160)
T ss_dssp CCCCSHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHcC
Confidence 4588999999999994
No 12
>3ma2_D Matrix metalloproteinase-14; protein - protein complex, cleavage on PAIR of basic residue disulfide bond, membrane, metal-binding; 2.05A {Homo sapiens} SCOP: d.92.1.11 PDB: 1bqq_M 1buv_M
Probab=53.85 E-value=15 Score=26.05 Aligned_cols=20 Identities=15% Similarity=0.242 Sum_probs=15.4
Q ss_pred CCCCHHHHHHHHhhCCCCCC
Q psy13283 78 RGATEGDLEKVRQMYCKKNA 97 (124)
Q Consensus 78 ~~lS~~Di~~IN~lY~C~~~ 97 (124)
..|+..||..|..||+++..
T Consensus 158 ~~l~~dDi~~i~~lYg~~~~ 177 (181)
T 3ma2_D 158 FVLPDDDRRGIQQLYGGESG 177 (181)
T ss_dssp CCCCHHHHHHHHHHHCC---
T ss_pred CCCCHHHHHHHHHHhCCCCC
Confidence 46999999999999987654
No 13
>1rm8_A MMP-16, matrix metalloproteinase-16, MT3-MMP; membrane type - matrix metalloproteinase, batimastat, hydroxamate inhibitor, protease, hydrolase; HET: BAT; 1.80A {Homo sapiens} SCOP: d.92.1.11
Probab=50.31 E-value=20 Score=24.72 Aligned_cols=16 Identities=19% Similarity=0.403 Sum_probs=14.2
Q ss_pred CCCCHHHHHHHHhhCC
Q psy13283 78 RGATEGDLEKVRQMYC 93 (124)
Q Consensus 78 ~~lS~~Di~~IN~lY~ 93 (124)
..|+..||..|+.||.
T Consensus 153 ~~l~~~Di~~iq~lYg 168 (169)
T 1rm8_A 153 FKLPNDDLQGIQKIYG 168 (169)
T ss_dssp CCCCHHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHHhC
Confidence 3689999999999995
No 14
>1g9k_A Serralysin; beta jelly roll, hydrolase; 1.96A {Pseudomonas} SCOP: b.80.7.1 d.92.1.6 PDB: 1o0q_A 1o0t_A 1om6_A 1om7_A 1om8_A 1omj_A 1h71_P
Probab=48.90 E-value=19 Score=29.34 Aligned_cols=20 Identities=15% Similarity=0.270 Sum_probs=16.8
Q ss_pred CCCCHHHHHHHHhhCCCCCC
Q psy13283 78 RGATEGDLEKVRQMYCKKNA 97 (124)
Q Consensus 78 ~~lS~~Di~~IN~lY~C~~~ 97 (124)
..|...||..|+.||..+..
T Consensus 229 ~~~~~~DI~aiQ~LYG~~~~ 248 (463)
T 1g9k_A 229 SAPLLDDIAAVQKLYGANLE 248 (463)
T ss_dssp SSCCHHHHHHHHHHHCBCTT
T ss_pred cCcchhhhhhhhcccccccc
Confidence 45889999999999987654
No 15
>1sat_A Serratia protease; parallel beta helix, parallel beta roll, hydrolase (serine protease); 1.75A {Serratia marcescens} SCOP: b.80.7.1 d.92.1.6 PDB: 1af0_A* 1smp_A 1srp_A
Probab=48.63 E-value=19 Score=29.31 Aligned_cols=20 Identities=10% Similarity=0.272 Sum_probs=16.6
Q ss_pred CCCCHHHHHHHHhhCCCCCC
Q psy13283 78 RGATEGDLEKVRQMYCKKNA 97 (124)
Q Consensus 78 ~~lS~~Di~~IN~lY~C~~~ 97 (124)
..+...||..|+.||.+...
T Consensus 232 ~~~~~~Di~aiQ~LYG~~~~ 251 (471)
T 1sat_A 232 AAPLLDDIAAIQHLYGANLS 251 (471)
T ss_dssp CSCCHHHHHHHHHHHCBCTT
T ss_pred CCCCcchhhhhhcccccccc
Confidence 35789999999999987754
No 16
>1k7i_A PROC, secreted protease C; metalloprotease, hydrolase; 1.59A {Erwinia chrysanthemi} SCOP: b.80.7.1 d.92.1.6 PDB: 1k7g_A 1k7q_A 1go8_P 3hbv_P 3hda_P 3hbu_P 1go7_P 3hb2_P
Probab=43.61 E-value=25 Score=28.72 Aligned_cols=20 Identities=10% Similarity=0.288 Sum_probs=16.5
Q ss_pred CCCCHHHHHHHHhhCCCCCC
Q psy13283 78 RGATEGDLEKVRQMYCKKNA 97 (124)
Q Consensus 78 ~~lS~~Di~~IN~lY~C~~~ 97 (124)
..+...||..|..||..+..
T Consensus 244 ~~~~~~Di~aIQ~LYG~~~~ 263 (479)
T 1k7i_A 244 GAPMIDDIAAIQRLYGANMT 263 (479)
T ss_dssp CSCCHHHHHHHHHHHCBCTT
T ss_pred CCCccchhhhhhheeccccc
Confidence 45789999999999987643
No 17
>1kap_P Alkaline protease; calcium binding protein, zinc metalloprotease; 1.64A {Pseudomonas aeruginosa} SCOP: b.80.7.1 d.92.1.6 PDB: 1jiw_P 1akl_A
Probab=34.17 E-value=43 Score=27.32 Aligned_cols=20 Identities=10% Similarity=0.275 Sum_probs=16.7
Q ss_pred CCCCHHHHHHHHhhCCCCCC
Q psy13283 78 RGATEGDLEKVRQMYCKKNA 97 (124)
Q Consensus 78 ~~lS~~Di~~IN~lY~C~~~ 97 (124)
..+...||..|..||..+..
T Consensus 241 ~~~~~~Di~aiq~lYG~~~~ 260 (479)
T 1kap_P 241 SAPLLDDIAAIQKLYGANLT 260 (479)
T ss_dssp SSCCHHHHHHHHHHHCBCTT
T ss_pred CCCCcchhhhhhcccccccc
Confidence 45789999999999987654
No 18
>2xs4_A Karilysin protease; hydrolase, bacterial MMP, virulence factor, metalloprotease, dependent, peptidase; 1.70A {Tannerella forsythia} PDB: 2xs3_A
Probab=27.89 E-value=34 Score=23.40 Aligned_cols=17 Identities=18% Similarity=0.147 Sum_probs=15.3
Q ss_pred CCCHHHHHHHHhhCCCC
Q psy13283 79 GATEGDLEKVRQMYCKK 95 (124)
Q Consensus 79 ~lS~~Di~~IN~lY~C~ 95 (124)
.|+..||..|+.||+.+
T Consensus 149 ~l~~~Di~~iq~lYg~~ 165 (167)
T 2xs4_A 149 QLDNDDCLAVWDLYGYP 165 (167)
T ss_dssp SCCHHHHHHHHHHHCCC
T ss_pred CCCHHHHHHHHHHhCCC
Confidence 79999999999999754
No 19
>3mp7_B Preprotein translocase subunit SECE; protein transport, membrane protein complex, preprotein TRAN membrane insertion,; 2.90A {Pyrococcus furiosus}
Probab=27.76 E-value=6.6 Score=23.46 Aligned_cols=11 Identities=36% Similarity=0.519 Sum_probs=8.7
Q ss_pred CCcCCCCceEE
Q psy13283 5 KNLAWRTAVRL 15 (124)
Q Consensus 5 ~RpDRD~yV~I 15 (124)
+.|||++|..|
T Consensus 23 ~KPd~~Ef~~i 33 (61)
T 3mp7_B 23 KKPNWATYKRA 33 (61)
T ss_dssp CCCCTTHHHHH
T ss_pred cCCCHHHHHHH
Confidence 57999988765
No 20
>1hy7_A Stromelysin-1, MMP-3; mixed alpha beta structure, zinc protease, inhibited, hydrol; HET: MBS; 1.50A {Homo sapiens} SCOP: d.92.1.11 PDB: 1biw_A* 1bm6_A* 1bqo_A* 1b3d_A* 1cqr_A 1d5j_A* 1d7x_A* 1d8f_A* 1d8m_A* 1g05_A* 1g49_A* 1c3i_A* 1sln_A* 1uea_A 2srt_A* 1ums_A* 1umt_A* 2d1o_A* 3oho_A* 1ciz_A* ...
Probab=25.55 E-value=46 Score=22.95 Aligned_cols=18 Identities=11% Similarity=0.324 Sum_probs=15.7
Q ss_pred CCCCHHHHHHHHhhCCCC
Q psy13283 78 RGATEGDLEKVRQMYCKK 95 (124)
Q Consensus 78 ~~lS~~Di~~IN~lY~C~ 95 (124)
..|+..||..|+.||..+
T Consensus 150 ~~l~~~Di~~iq~lYg~~ 167 (173)
T 1hy7_A 150 FRLSQDDINGIQSLYGPP 167 (173)
T ss_dssp CCCCHHHHHHHHHHHCSC
T ss_pred CCCCHHHHHHHHHHhCcC
Confidence 458999999999999765
No 21
>3ayu_A 72 kDa type IV collagenase; protease, hydrolase-hydrolase inhibitor complex; 2.00A {Homo sapiens} PDB: 1qib_A 1hov_A*
Probab=22.95 E-value=43 Score=23.11 Aligned_cols=18 Identities=11% Similarity=0.374 Sum_probs=15.5
Q ss_pred CCCCHHHHHHHHhhCCCC
Q psy13283 78 RGATEGDLEKVRQMYCKK 95 (124)
Q Consensus 78 ~~lS~~Di~~IN~lY~C~ 95 (124)
..|+..||..|+.||+.+
T Consensus 148 ~~l~~~Di~~iq~lYg~~ 165 (167)
T 3ayu_A 148 FRLSQDDIKGIQELYGAS 165 (167)
T ss_dssp CCCCHHHHHHHHHHHCCC
T ss_pred CCCCHHHHHHHHHHhCcC
Confidence 469999999999999654
No 22
>2ovx_A Matrix metalloproteinase-9 (EC 3.4.24.35) (MMP-9) type IV collagenase) (92 kDa gelatinase)...; S1-prime pocket, hydrolase-hydrola inhibitor complex; HET: 4MR; 2.00A {Homo sapiens} SCOP: d.92.1.11 PDB: 2ovz_A* 2ow0_A* 2ow1_A* 2ow2_A* 1gkd_A* 1gkc_A*
Probab=21.51 E-value=50 Score=22.50 Aligned_cols=15 Identities=20% Similarity=0.516 Sum_probs=13.8
Q ss_pred CCCCHHHHHHHHhhC
Q psy13283 78 RGATEGDLEKVRQMY 92 (124)
Q Consensus 78 ~~lS~~Di~~IN~lY 92 (124)
..|+..||..|+.||
T Consensus 145 ~~l~~~Di~~iq~LY 159 (159)
T 2ovx_A 145 PPLHKDDVNGIRHLY 159 (159)
T ss_dssp CSCCHHHHHHHHHHC
T ss_pred CCCCHHHHHHHHHhC
Confidence 479999999999998
No 23
>1y93_A Macrophage metalloelastase; matrix metalloproteinase, MMP12, complex (elastase inhibitor), acetohydroxamic acid, hydrola; 1.03A {Homo sapiens} SCOP: d.92.1.11 PDB: 1rmz_A 1ycm_A* 1z3j_A* 2hu6_A* 2oxu_A 2oxw_A 2oxz_A 3lik_A* 3lil_A* 3lir_A* 3ljg_A* 1os9_A 1os2_A 3f17_A* 3ehy_A* 3ehx_A* 3f15_A* 3f16_A* 3f18_A* 3f19_A* ...
Probab=20.37 E-value=53 Score=22.40 Aligned_cols=16 Identities=13% Similarity=0.343 Sum_probs=14.2
Q ss_pred CCCCHHHHHHHHhhCC
Q psy13283 78 RGATEGDLEKVRQMYC 93 (124)
Q Consensus 78 ~~lS~~Di~~IN~lY~ 93 (124)
..|+..||..|+.||+
T Consensus 144 ~~l~~~Di~~iq~lYG 159 (159)
T 1y93_A 144 FRLSADDIRGIQSLYG 159 (159)
T ss_dssp CCCCHHHHHHHHTTCC
T ss_pred CCCCHHHHHHHHHhcC
Confidence 4689999999999994
No 24
>1c7k_A NCNP, zinc endoprotease; alpha and beta protein, metalloproteinase, hydrolase; 1.00A {Streptomyces caespitosus} SCOP: d.92.1.1 PDB: 1kuh_A
Probab=20.17 E-value=95 Score=21.01 Aligned_cols=15 Identities=7% Similarity=0.226 Sum_probs=13.2
Q ss_pred CCCHHHHHHHHhhCC
Q psy13283 79 GATEGDLEKVRQMYC 93 (124)
Q Consensus 79 ~lS~~Di~~IN~lY~ 93 (124)
.+...|+..|+.+|.
T Consensus 116 ~p~~~d~a~Vq~ly~ 130 (132)
T 1c7k_A 116 YPNAQERSRVNALWA 130 (132)
T ss_dssp SCCHHHHHHHHHHTT
T ss_pred CCCHHHHHHHHHHhc
Confidence 388899999999994
Done!