Query psy13284
Match_columns 230
No_of_seqs 339 out of 2427
Neff 6.4
Searched_HMMs 29240
Date Fri Aug 16 15:32:47 2013
Command hhsearch -i /work/01045/syshi/Psyhhblits/psy13284.a3m -d /work/01045/syshi/HHdatabase/pdb70.hhm -o /work/01045/syshi/hhsearch_pdb/13284hhsearch_pdb -cpu 12 -v 0
No Hit Prob E-value P-value Score SS Cols Query HMM Template HMM
1 2ej7_A HCG3 gene; HCG3 protein 99.9 2.3E-25 8E-30 163.0 8.3 76 25-100 6-81 (82)
2 2dmx_A DNAJ homolog subfamily 99.9 3.3E-25 1.1E-29 165.7 9.1 79 25-103 6-84 (92)
3 1bq0_A DNAJ, HSP40; chaperone, 99.9 1.1E-25 3.7E-30 171.9 4.5 74 28-102 3-76 (103)
4 2lgw_A DNAJ homolog subfamily 99.9 4E-25 1.4E-29 168.1 6.9 77 27-103 1-77 (99)
5 1hdj_A Human HSP40, HDJ-1; mol 99.9 1.5E-24 5.2E-29 157.0 7.2 73 28-102 3-75 (77)
6 2dn9_A DNAJ homolog subfamily 99.9 3.2E-24 1.1E-28 155.9 8.9 74 25-99 4-77 (79)
7 2ctr_A DNAJ homolog subfamily 99.9 2.7E-24 9.3E-29 159.7 7.4 77 25-103 4-80 (88)
8 2ctp_A DNAJ homolog subfamily 99.9 5E-24 1.7E-28 154.6 8.4 73 25-99 4-76 (78)
9 2cug_A Mkiaa0962 protein; DNAJ 99.9 8E-24 2.7E-28 157.2 8.1 77 21-99 10-86 (88)
10 2ctq_A DNAJ homolog subfamily 99.9 3.3E-24 1.1E-28 166.2 5.9 81 18-99 10-90 (112)
11 2och_A Hypothetical protein DN 99.9 4.4E-23 1.5E-27 148.0 7.8 66 28-97 8-73 (73)
12 2ctw_A DNAJ homolog subfamily 99.9 1.2E-22 4.2E-27 156.7 8.3 76 23-99 12-87 (109)
13 2yua_A Williams-beuren syndrom 99.9 1.4E-22 4.8E-27 153.7 8.1 70 25-95 14-83 (99)
14 3apq_A DNAJ homolog subfamily 99.9 2.2E-22 7.5E-27 168.7 9.9 75 27-102 1-75 (210)
15 1wjz_A 1700030A21RIK protein; 99.9 6.2E-23 2.1E-27 153.6 5.8 72 25-96 13-89 (94)
16 3lz8_A Putative chaperone DNAJ 99.9 8.9E-24 3E-28 191.4 0.0 71 25-97 25-95 (329)
17 2o37_A Protein SIS1; HSP40, J- 99.9 8.6E-23 2.9E-27 152.9 5.4 70 28-101 8-77 (92)
18 2qsa_A DNAJ homolog DNJ-2; J-d 99.8 5.9E-22 2E-26 152.5 5.8 72 25-96 12-86 (109)
19 2ys8_A RAB-related GTP-binding 99.8 9.1E-21 3.1E-25 141.4 7.0 62 27-90 26-87 (90)
20 2l6l_A DNAJ homolog subfamily 99.8 8.5E-21 2.9E-25 154.4 6.9 72 25-96 7-83 (155)
21 1iur_A KIAA0730 protein; DNAJ 99.8 5.1E-21 1.7E-25 142.6 4.9 65 25-89 13-77 (88)
22 1gh6_A Large T antigen; tumor 99.8 5.2E-21 1.8E-25 149.0 2.3 65 27-96 7-73 (114)
23 1faf_A Large T antigen; J doma 99.8 6.3E-20 2.2E-24 133.9 7.0 67 27-99 10-78 (79)
24 2pf4_E Small T antigen; PP2A, 99.8 2.8E-20 9.4E-25 154.6 1.9 64 28-96 11-76 (174)
25 1fpo_A HSC20, chaperone protei 99.8 3.2E-19 1.1E-23 147.8 6.7 69 28-96 1-75 (171)
26 3hho_A CO-chaperone protein HS 99.8 5.7E-19 1.9E-23 146.6 7.1 69 27-95 3-77 (174)
27 1n4c_A Auxilin; four helix bun 99.8 2.4E-19 8.1E-24 149.9 4.1 64 28-91 117-182 (182)
28 2qwo_B Putative tyrosine-prote 99.8 2.8E-19 9.5E-24 134.3 3.6 57 28-84 33-91 (92)
29 3bvo_A CO-chaperone protein HS 99.7 1.2E-18 4.2E-23 148.4 7.0 68 27-94 42-115 (207)
30 2guz_A Mitochondrial import in 99.7 4E-18 1.4E-22 121.8 5.6 58 26-88 12-70 (71)
31 3apo_A DNAJ homolog subfamily 99.7 1E-18 3.4E-23 171.8 2.5 76 27-103 20-95 (780)
32 3uo3_A J-type CO-chaperone JAC 99.7 1.8E-18 6.3E-23 144.5 3.6 68 24-95 7-81 (181)
33 3ag7_A Putative uncharacterize 99.7 1E-18 3.5E-23 134.4 1.2 58 28-86 41-104 (106)
34 2y4t_A DNAJ homolog subfamily 99.3 6.9E-13 2.4E-17 117.9 5.4 67 27-93 381-449 (450)
35 2guz_B Mitochondrial import in 99.0 4.8E-10 1.6E-14 78.7 5.3 54 27-85 3-59 (65)
36 2pzi_A Probable serine/threoni 93.5 0.035 1.2E-06 53.4 2.9 49 24-81 625-675 (681)
37 2lgw_A DNAJ homolog subfamily 75.1 5 0.00017 29.1 5.1 23 1-23 1-23 (99)
38 2o37_A Protein SIS1; HSP40, J- 69.5 1.5 5.1E-05 31.4 1.0 22 2-23 8-29 (92)
39 2dmx_A DNAJ homolog subfamily 68.3 9.4 0.00032 26.9 5.2 23 1-23 8-30 (92)
40 2ys8_A RAB-related GTP-binding 68.2 2.6 9E-05 30.0 2.1 47 2-54 27-81 (90)
41 2ctr_A DNAJ homolog subfamily 67.1 1.5 5.2E-05 31.1 0.7 22 2-23 7-28 (88)
42 2cug_A Mkiaa0962 protein; DNAJ 66.5 2.8 9.5E-05 29.6 2.0 22 2-23 17-38 (88)
43 2ctq_A DNAJ homolog subfamily 66.4 5.9 0.0002 29.3 3.9 22 2-23 20-41 (112)
44 1hdj_A Human HSP40, HDJ-1; mol 65.9 2.2 7.4E-05 29.3 1.3 22 2-23 3-24 (77)
45 2och_A Hypothetical protein DN 65.4 2.2 7.6E-05 29.0 1.2 22 2-23 8-29 (73)
46 2ej7_A HCG3 gene; HCG3 protein 61.9 3.2 0.00011 28.7 1.5 23 1-23 8-30 (82)
47 3apq_A DNAJ homolog subfamily 57.6 5.4 0.00018 31.9 2.4 25 1-25 1-25 (210)
48 1gh6_A Large T antigen; tumor 51.9 14 0.00047 27.6 3.7 46 2-53 8-60 (114)
49 2l6l_A DNAJ homolog subfamily 40.3 8.6 0.00029 29.9 0.9 22 2-23 10-31 (155)
50 2cqn_A Formin-binding protein 40.2 46 0.0016 23.1 4.7 55 40-95 6-62 (77)
51 2yua_A Williams-beuren syndrom 38.0 33 0.0011 24.4 3.8 22 2-23 17-38 (99)
52 3lz8_A Putative chaperone DNAJ 36.4 7.4 0.00025 34.5 0.0 26 2-27 28-53 (329)
53 1wjz_A 1700030A21RIK protein; 35.7 41 0.0014 23.4 4.0 22 2-23 16-37 (94)
54 4a3n_A Transcription factor SO 34.5 74 0.0025 20.6 4.9 41 46-92 14-54 (71)
55 2b7e_A PRE-mRNA processing pro 32.5 44 0.0015 22.3 3.3 49 43-95 3-56 (59)
56 1hry_A Human SRY; DNA, DNA-bin 32.2 88 0.003 20.6 5.1 41 46-92 16-56 (76)
57 2ctw_A DNAJ homolog subfamily 31.9 66 0.0022 23.3 4.7 22 2-23 17-38 (109)
58 1wz6_A HMG-box transcription f 31.5 81 0.0028 21.3 4.9 41 46-92 19-59 (82)
59 1uzc_A Hypothetical protein FL 29.2 62 0.0021 22.1 3.8 54 39-94 11-65 (71)
60 3f27_D Transcription factor SO 28.7 1.1E+02 0.0036 20.6 5.1 41 46-92 18-58 (83)
61 2cs1_A PMS1 protein homolog 1; 27.1 1.1E+02 0.0036 21.3 4.9 42 46-93 19-60 (92)
62 2kvo_A Photosystem II reaction 25.7 72 0.0025 24.2 3.9 27 204-230 60-86 (120)
63 2d7l_A WD repeat and HMG-box D 25.7 1.1E+02 0.0038 21.0 4.7 46 46-96 17-62 (81)
64 1ny9_A Transcriptional activat 23.1 85 0.0029 23.6 4.0 52 35-95 71-123 (143)
65 2eqz_A High mobility group pro 22.7 1.4E+02 0.0047 20.3 4.8 43 46-92 27-69 (86)
66 1qqr_A Streptokinase domain B; 22.5 34 0.0012 26.6 1.5 31 30-60 34-64 (138)
67 1i11_A Transcription factor SO 22.3 70 0.0024 21.5 3.1 41 46-92 16-56 (81)
68 1wgf_A Upstream binding factor 22.2 74 0.0025 22.1 3.2 42 46-93 32-73 (90)
69 2crj_A SWI/SNF-related matrix- 21.7 84 0.0029 21.8 3.5 39 46-90 19-57 (92)
70 4euw_A Transcription factor SO 20.7 91 0.0031 22.4 3.6 41 46-92 41-81 (106)
71 1cf7_A Protein (transcription 20.3 37 0.0013 23.6 1.2 43 39-93 9-51 (76)
72 3u2b_C Transcription factor SO 20.1 93 0.0032 20.6 3.3 40 46-91 14-53 (79)
No 1
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.92 E-value=2.3e-25 Score=163.00 Aligned_cols=76 Identities=64% Similarity=1.061 Sum_probs=71.3
Q ss_pred cCccchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCCCC
Q psy13284 25 SSMLDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRGKGGYE 100 (230)
Q Consensus 25 ~~~~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~~g~~ 100 (230)
..+.|||+||||+++|+.++||+|||+|+++||||+++...+.++++|++|++||+||+||.+|..||++|..++.
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~~ 81 (82)
T 2ej7_A 6 SGMVDYYEVLDVPRQASSEAIKKAYRKLALKWHPDKNPENKEEAERRFKQVAEAYEVLSDAKKRDIYDRYGSGPSS 81 (82)
T ss_dssp SSSCCHHHHTTCCTTCCHHHHHHHHHHHHTTSCTTTCSTTHHHHHHHHHHHHHHHHHHSSTTHHHHHHHTCCCSCC
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCcHHHHHHHHHHHHHHHHHHCCHHHHHHHHHcCccccC
Confidence 4578999999999999999999999999999999999987778999999999999999999999999999987754
No 2
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.92 E-value=3.3e-25 Score=165.74 Aligned_cols=79 Identities=63% Similarity=1.012 Sum_probs=73.8
Q ss_pred cCccchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCCCCCCC
Q psy13284 25 SSMLDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRGKGGYEDSR 103 (230)
Q Consensus 25 ~~~~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~~g~~~~~ 103 (230)
..+.|||+||||+++|+.++||+|||+|+++||||+++...+.++++|++|++||+||+||.+|..||++|.+++..++
T Consensus 6 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~~~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~~ 84 (92)
T 2dmx_A 6 SGMANYYEVLGVQASASPEDIKKAYRKLALRWHPDKNPDNKEEAEKKFKLVSEAYEVLSDSKKRSLYDRAGCDSWRAGG 84 (92)
T ss_dssp CCCCCHHHHHTCCTTCCTTHHHHHHHHHHHHTCTTTCSSCSHHHHHHHHHHHHHHHHHHSHHHHHHHHHHCSCSSCCCC
T ss_pred CCCcCHHHHcCCCCCCCHHHHHHHHHHHHHHHCCCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccCCC
Confidence 4578999999999999999999999999999999999987778999999999999999999999999999998887644
No 3
>1bq0_A DNAJ, HSP40; chaperone, heat shock, protein folding, DNAK; NMR {Escherichia coli} SCOP: a.2.3.1 PDB: 1xbl_A 1bqz_A
Probab=99.91 E-value=1.1e-25 Score=171.93 Aligned_cols=74 Identities=51% Similarity=0.942 Sum_probs=69.0
Q ss_pred cchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCCCCCC
Q psy13284 28 LDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRGKGGYEDS 102 (230)
Q Consensus 28 ~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~~g~~~~ 102 (230)
.|||+||||+++|+.++||+|||+|+++||||+++.+ +.++++|++|++||+||+||.+|..||++|.+++..+
T Consensus 3 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~~ 76 (103)
T 1bq0_A 3 QDYYEILGVSKTAEEREIRKAYKRLAMKYHPDRNQGD-KEAEAKFKEIKEAYEVLTDSQKRAAYDQYGHAAFEQG 76 (103)
T ss_dssp CCSTTTTSSCSSCCHHHHHHHHHHHHTTTCTTTCTTT-CTHHHHHHHHTTTTTSTTCSHHHHHTTTSTTTSSCSC
T ss_pred CCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHCCHHHHHHHHHHhhhhhccc
Confidence 5899999999999999999999999999999999864 4688999999999999999999999999999988753
No 4
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=99.91 E-value=4e-25 Score=168.09 Aligned_cols=77 Identities=58% Similarity=0.989 Sum_probs=68.7
Q ss_pred ccchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCCCCCCC
Q psy13284 27 MLDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRGKGGYEDSR 103 (230)
Q Consensus 27 ~~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~~g~~~~~ 103 (230)
|.|||+||||+++|+.++||+|||+|+++||||+++...+.++++|++|++||+||+||.+|..||++|.+++.+.+
T Consensus 1 M~d~Y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~~~~~a~~~f~~I~~AY~vL~d~~~R~~YD~~g~~~~~~~~ 77 (99)
T 2lgw_A 1 MASYYEILDVPRSASADDIKKAYRRKALQWHPDKNPDNKEFAEKKFKEVAEAYEVLSDKHKREIYDRYGREGLTGTG 77 (99)
T ss_dssp CCCHHHHSSSCTTSCHHHHHHHHHHHHHHTSTTTCCSCCHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHHC------
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCccHHHHHHHHHHHHHHHHHHCCHHHHHHHHHhCcccccCCC
Confidence 68999999999999999999999999999999999987778999999999999999999999999999998877543
No 5
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.90 E-value=1.5e-24 Score=156.99 Aligned_cols=73 Identities=52% Similarity=0.920 Sum_probs=68.1
Q ss_pred cchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCCCCCC
Q psy13284 28 LDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRGKGGYEDS 102 (230)
Q Consensus 28 ~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~~g~~~~ 102 (230)
.|||+||||+++|+.++||+|||+|+++||||+++. +.++++|++|++||++|+||.+|..||++|.+++.++
T Consensus 3 ~~~y~iLgv~~~as~~~Ik~ayr~l~~~~HPD~~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~ 75 (77)
T 1hdj_A 3 KDYYQTLGLARGASDEEIKRAYRRQALRYHPDKNKE--PGAEEKFKEIAEAYDVLSDPRKREIFDRYGEEGLKGS 75 (77)
T ss_dssp CCSHHHHTCCTTCCHHHHHHHHHHHHHTTCTTTCCC--TTHHHHHHHHHHHHHHTTCHHHHHHHHHTCGGGCCSS
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHHCCHHHHHHHHHHcccccccC
Confidence 589999999999999999999999999999999986 4678999999999999999999999999999887653
No 6
>2dn9_A DNAJ homolog subfamily A member 3; J-domain, TID1, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=99.90 E-value=3.2e-24 Score=155.91 Aligned_cols=74 Identities=53% Similarity=0.847 Sum_probs=68.0
Q ss_pred cCccchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCCC
Q psy13284 25 SSMLDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRGKGGY 99 (230)
Q Consensus 25 ~~~~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~~g~ 99 (230)
....|||+||||+++|+.++||+|||+|+++||||+++.+ +.++++|++|++||+||+||.+|..||++|..+.
T Consensus 4 ~~~~~~y~iLgv~~~a~~~~Ik~ayr~l~~~~HPD~~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 77 (79)
T 2dn9_A 4 GSSGDYYQILGVPRNASQKEIKKAYYQLAKKYHPDTNKDD-PKAKEKFSQLAEAYEVLSDEVKRKQYDAYGSGPS 77 (79)
T ss_dssp SCCSCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCSSC-TTHHHHHHHHHHHHHHHHSHHHHHHHHHSCCCCS
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHhccCcCC
Confidence 3457999999999999999999999999999999999865 4688999999999999999999999999997654
No 7
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.90 E-value=2.7e-24 Score=159.72 Aligned_cols=77 Identities=48% Similarity=0.826 Sum_probs=70.6
Q ss_pred cCccchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCCCCCCC
Q psy13284 25 SSMLDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRGKGGYEDSR 103 (230)
Q Consensus 25 ~~~~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~~g~~~~~ 103 (230)
....|||+||||+++|+.++||+|||+|+++||||+++. +.++++|++|++||+||+||.+|..||++|..++..+.
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~a~~~f~~i~~Ay~~L~d~~~R~~Yd~~~~~~~~~~~ 80 (88)
T 2ctr_A 4 GSSGSYYDILGVPKSASERQIKKAFHKLAMKYHPDKNKS--PDAEAKFREIAEAYETLSDANRRKEYDTLGHSAFTSGK 80 (88)
T ss_dssp CCCCSHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCCS--HHHHHHHHHHHHHHHHHHSSHHHHHHHHTCHHHHTCSS
T ss_pred CCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--hHHHHHHHHHHHHHHHHCCHHHHHHHHHhCccccccCC
Confidence 456799999999999999999999999999999999985 57899999999999999999999999999988776543
No 8
>2ctp_A DNAJ homolog subfamily B member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.90 E-value=5e-24 Score=154.62 Aligned_cols=73 Identities=52% Similarity=0.830 Sum_probs=67.9
Q ss_pred cCccchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCCC
Q psy13284 25 SSMLDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRGKGGY 99 (230)
Q Consensus 25 ~~~~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~~g~ 99 (230)
.+..|||+||||+++|+.++||+|||+|+++||||+++. +.++++|++|++||+||+||.+|..||++|.++.
T Consensus 4 ~~~~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~ 76 (78)
T 2ctp_A 4 GSSGDYYEILGVSRGASDEDLKKAYRRLALKFHPDKNHA--PGATEAFKAIGTAYAVLSNPEKRKQYDQFGSGPS 76 (78)
T ss_dssp SCSCCHHHHHTCCTTCCHHHHHHHHHHHHTTSCTTTCSS--HHHHHHHHHHHHHHHHHTSHHHHHHHHHTCSCSC
T ss_pred CCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHHCCHHHHHHHHHcCcccc
Confidence 456899999999999999999999999999999999986 5788999999999999999999999999997764
No 9
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=99.90 E-value=8e-24 Score=157.19 Aligned_cols=77 Identities=51% Similarity=0.827 Sum_probs=68.9
Q ss_pred hhhccCccchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCCC
Q psy13284 21 KASHSSMLDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRGKGGY 99 (230)
Q Consensus 21 ~~~~~~~~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~~g~ 99 (230)
+.......|||+||||+++|+.++||+|||+|+++||||+++. +.++++|++|++||++|+||.+|..||++|..+.
T Consensus 10 ~~~~~~~~d~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~~~ 86 (88)
T 2cug_A 10 QSLSALDFDPYRVLGVSRTASQADIKKAYKKLAREWHPDKNKD--PGAEDRFIQISKAYEILSNEEKRTNYDHYGSGPS 86 (88)
T ss_dssp CCCCSSSSCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCCS--TTHHHHHHHHHHHHHHHHSHHHHHHHHHHTTCCC
T ss_pred hhhccCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--hhHHHHHHHHHHHHHHHCCHHHHHHHHHcCCCCC
Confidence 3333445799999999999999999999999999999999986 4688999999999999999999999999997653
No 10
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.89 E-value=3.3e-24 Score=166.17 Aligned_cols=81 Identities=33% Similarity=0.569 Sum_probs=71.8
Q ss_pred hhhhhhccCccchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCC
Q psy13284 18 DIKKASHSSMLDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRGKG 97 (230)
Q Consensus 18 ~~~~~~~~~~~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~~ 97 (230)
.+..+......|||+||||+++|+.++||+|||+|+++||||+++.+ +.++++|++|++||+||+||.+|..||++|.+
T Consensus 10 ~i~~~~~~~~~d~Y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 88 (112)
T 2ctq_A 10 AILNYRSEDTEDYYTLLGCDELSSVEQILAEFKVRALECHPDKHPEN-PKAVETFQKLQKAKEILTNEESRARYDHWRRS 88 (112)
T ss_dssp CCCCCCCCCCCCHHHHTTCCTTSCHHHHHHHHHHHHHTTCTTTCTTC-STHHHHHHHHHHHHHHHHSHHHHHHHHHHHHH
T ss_pred HHHhccccCCCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHCCHHHHHHHHHhhhh
Confidence 34444445668999999999999999999999999999999999865 36889999999999999999999999999876
Q ss_pred CC
Q psy13284 98 GY 99 (230)
Q Consensus 98 g~ 99 (230)
++
T Consensus 89 ~~ 90 (112)
T 2ctq_A 89 QM 90 (112)
T ss_dssp TC
T ss_pred cc
Confidence 64
No 11
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=99.88 E-value=4.4e-23 Score=147.95 Aligned_cols=66 Identities=64% Similarity=1.063 Sum_probs=61.0
Q ss_pred cchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCC
Q psy13284 28 LDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRGKG 97 (230)
Q Consensus 28 ~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~~ 97 (230)
.|||+||||+++|+.++||+|||+|+++||||++++. .++|++|++||+||+||.+|..||++|++
T Consensus 8 ~~~y~iLgl~~~a~~~eIk~ayr~l~~~~HPD~~~~~----~~~f~~i~~Ay~~L~d~~~R~~YD~~g~~ 73 (73)
T 2och_A 8 TGYYDVLGVKPDASDNELKKAYRKMALKFHPDKNPDG----AEQFKQISQAYEVLSDEKKRQIYDQGGEE 73 (73)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHHHHHHHHTCTTTCTTC----HHHHHHHHHHHHHHTSHHHHHHHHHTC--
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCcCH----HHHHHHHHHHHHHHCCHHHHHHHHhcCCC
Confidence 6999999999999999999999999999999999864 46899999999999999999999999864
No 12
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=99.87 E-value=1.2e-22 Score=156.65 Aligned_cols=76 Identities=57% Similarity=0.872 Sum_probs=69.0
Q ss_pred hccCccchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCCC
Q psy13284 23 SHSSMLDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRGKGGY 99 (230)
Q Consensus 23 ~~~~~~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~~g~ 99 (230)
......|||+||||+++|+.++||+|||+|+++||||+++.+ +.++++|++|++||+||+||.+|..||++|..++
T Consensus 12 ~~~~~~~~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~~-~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~g~~~~ 87 (109)
T 2ctw_A 12 LSTSGESLYHVLGLDKNATSDDIKKSYRKLALKYHPDKNPDN-PEAADKFKEINNAHAILTDATKRNIYDKYGSLGL 87 (109)
T ss_dssp TTSCSCCHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTSTTC-HHHHHHHHHHHHHHHHHTCHHHHHHHHHTCHHHH
T ss_pred cCCCCCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCCc-HHHHHHHHHHHHHHHHHcCHHHHHHHHHhccccc
Confidence 344557999999999999999999999999999999999875 4788999999999999999999999999987654
No 13
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.87 E-value=1.4e-22 Score=153.66 Aligned_cols=70 Identities=37% Similarity=0.602 Sum_probs=64.5
Q ss_pred cCccchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcC
Q psy13284 25 SSMLDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRG 95 (230)
Q Consensus 25 ~~~~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g 95 (230)
....|||+||||+++|+.++||+|||+|+++||||+++.+ +.++++|++|++||+||+||.+|..||++.
T Consensus 14 ~~~~~~Y~vLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~-~~a~~~f~~i~~Ay~~L~d~~~R~~YD~~l 83 (99)
T 2yua_A 14 YSRTALYDLLGVPSTATQAQIKAAYYRQCFLYHPDRNSGS-AEAAERFTRISQAYVVLGSATLRRKYDRGL 83 (99)
T ss_dssp SCSSHHHHHHTCCTTCCHHHHHHHHHHHHHHSCTTTCSSC-SHHHHHHHHHHHHHHHTTSHHHHHHHHHTC
T ss_pred CCccCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-HHHHHHHHHHHHHHHHHCCHHHHHHHHHhc
Confidence 3457999999999999999999999999999999999865 468899999999999999999999999854
No 14
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=99.87 E-value=2.2e-22 Score=168.70 Aligned_cols=75 Identities=49% Similarity=0.880 Sum_probs=69.7
Q ss_pred ccchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCCCCCC
Q psy13284 27 MLDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRGKGGYEDS 102 (230)
Q Consensus 27 ~~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~~g~~~~ 102 (230)
|.|||+||||+++|+.++||+|||+|+++||||+++.+ ++|+++|++|++||++|+||.+|+.||++|..++...
T Consensus 1 ~~~~y~~l~~~~~a~~~~ik~ay~~l~~~~HPD~~~~~-~~~~~~f~~i~~Ay~~L~~~~~r~~yd~~~~~~~~~~ 75 (210)
T 3apq_A 1 IQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDN 75 (210)
T ss_dssp CCCHHHHHTCCTTCCHHHHHHHHHHHHHHHCGGGCTTC-TTHHHHHHHHHHHHHHHTSHHHHHHHHHHTTTTCCTT
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHHHHHHhCCHHHHHHHHHhcccccccc
Confidence 57999999999999999999999999999999999865 4688999999999999999999999999999887653
No 15
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=99.87 E-value=6.2e-23 Score=153.59 Aligned_cols=72 Identities=35% Similarity=0.675 Sum_probs=65.5
Q ss_pred cCccchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCc-----hHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCC
Q psy13284 25 SSMLDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDN-----QSEANKKFKEISEAYEVLSDEKKRRIYDDRGK 96 (230)
Q Consensus 25 ~~~~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~-----~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~ 96 (230)
....|||+||||+++|+.++||+|||+|+++||||+++.+ .+.++++|++|++||+||+||.+|..||++..
T Consensus 13 ~~~~~~y~iLgv~~~as~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~~~~~f~~i~~Ay~~L~d~~~R~~YD~~l~ 89 (94)
T 1wjz_A 13 TLKKDWYSILGADPSANMSDLKQKYQKLILLYHPDKQSADVPAGTMEECMQKFIEIDQAWKILGNEETKKKYDLQRS 89 (94)
T ss_dssp SSCSCHHHHTTCCTTCCHHHHHHHHHHTTSSSCSTTCCTTCCHHHHHHHHHHHHHHHHHHHHHSSSSHHHHHHHHSC
T ss_pred CCCCChHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCChhhhHHHHHHHHHHHHHHHHHCCHHHHHHHHHHcc
Confidence 3457999999999999999999999999999999998742 35788999999999999999999999999764
No 16
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=99.87 E-value=8.9e-24 Score=191.44 Aligned_cols=71 Identities=44% Similarity=0.753 Sum_probs=0.0
Q ss_pred cCccchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCC
Q psy13284 25 SSMLDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRGKG 97 (230)
Q Consensus 25 ~~~~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~~ 97 (230)
.++.|||+||||+++|+.+|||+|||+||++||||+|++ +.|+++|++|++||+||+||++|+.||+++..
T Consensus 25 m~~~d~Y~vLgv~~~as~~eIk~aYr~la~~~HPDk~~~--~~a~~~f~~i~~Ay~vL~d~~~R~~YD~~~~~ 95 (329)
T 3lz8_A 25 MELKDYYAILGVQPTDDLKTIKTAYRRLARKYHPDVSKE--NDAEAKFKDLAEAWEVLKDEQRRAEYDQLWQH 95 (329)
T ss_dssp -------------------------------------------------------------------------
T ss_pred ccccCHHHHcCcCCCCCHHHHHHHHHHHHHHHCCCCCCC--hHHHHHHHHHHHHHHHhhhhhhhcccchhhcc
Confidence 345799999999999999999999999999999999986 37889999999999999999999999998544
No 17
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=99.87 E-value=8.6e-23 Score=152.88 Aligned_cols=70 Identities=47% Similarity=0.800 Sum_probs=64.9
Q ss_pred cchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCCCCC
Q psy13284 28 LDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRGKGGYED 101 (230)
Q Consensus 28 ~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~~g~~~ 101 (230)
.|||+||||+++|+.++||+|||+|+++||||+++.+ .++|++|++||+||+||.+|..||++|.+++..
T Consensus 8 ~~~y~iLgv~~~as~~eIk~ayr~l~~~~HPDk~~~~----~~~f~~i~~Ay~~L~d~~~R~~YD~~~~~~~~~ 77 (92)
T 2o37_A 8 TKLYDLLGVSPSANEQELKKGYRKAALKYHPDKPTGD----TEKFKEISEAFEILNDPQKREIYDQYGLEAARS 77 (92)
T ss_dssp CHHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTSTTCC----HHHHHHHHHHHHHHTSHHHHHHHHHHCHHHHHT
T ss_pred CCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCh----HHHHHHHHHHHHHHCCHHHHHHHHHHCHHHhhc
Confidence 6999999999999999999999999999999999864 358999999999999999999999999877654
No 18
>2qsa_A DNAJ homolog DNJ-2; J-domain, HSP40, APC90001.8, structural genomics, PSI-2, Pro structure initiative; 1.68A {Caenorhabditis elegans}
Probab=99.85 E-value=5.9e-22 Score=152.48 Aligned_cols=72 Identities=33% Similarity=0.565 Sum_probs=65.8
Q ss_pred cCccchhhhhCCCCCC-CHHHHHHHHHHHHHHhCCCCCCC--chHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCC
Q psy13284 25 SSMLDYYKVLGVDKQS-STGDIKKAYRKLALKWHPDKNPD--NQSEANKKFKEISEAYEVLSDEKKRRIYDDRGK 96 (230)
Q Consensus 25 ~~~~dyY~iLgv~~~a-s~~eIKkaYrklalk~HPDkn~~--~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~ 96 (230)
....|||+||||+++| +.++||+|||+|+++||||+++. ..+.++++|++|++||+||+||.+|+.||+++.
T Consensus 12 ~~~~~~y~iLgv~~~a~s~~eIk~aYr~l~~~~HPDk~~~~~~~~~a~~~f~~i~~AY~~L~d~~~R~~YD~~~~ 86 (109)
T 2qsa_A 12 CGLENCYDVLEVNREEFDKQKLAKAYRALARKHHPDRVKNKEEKLLAEERFRVIATAYETLKDDEAKTNYDYYLD 86 (109)
T ss_dssp TTTSCHHHHTTCCGGGCCHHHHHHHHHHHHHHTCGGGCCSHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHHH
T ss_pred cCCCCHHHHcCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCccccHHHHHHHHHHHHHHHHHCCHHHHHHHHHhcc
Confidence 3457999999999999 99999999999999999999975 345789999999999999999999999999874
No 19
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=99.82 E-value=9.1e-21 Score=141.44 Aligned_cols=62 Identities=34% Similarity=0.477 Sum_probs=57.7
Q ss_pred ccchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhh
Q psy13284 27 MLDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRI 90 (230)
Q Consensus 27 ~~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~ 90 (230)
..|||+||||+++|+.++||+|||+|+++||||+++. +.++++|++|++||++|+|+.+|..
T Consensus 26 ~~~~y~iLgv~~~as~~eIk~aYr~la~~~HPDk~~~--~~~~~~f~~i~~Ay~~L~d~~~R~~ 87 (90)
T 2ys8_A 26 SKDSWDMLGVKPGASRDEVNKAYRKLAVLLHPDKCVA--PGSEDAFKAVVNARTALLKNIKSGP 87 (90)
T ss_dssp CSSHHHHHTCCTTCCHHHHHHHHHHHHHHHCTTTCCC--TTHHHHHHHHHHHHHHHHHHHCCSC
T ss_pred CCCHHHHcCcCCCCCHHHHHHHHHHHHHHHCcCCCCC--ccHHHHHHHHHHHHHHHCCcccccC
Confidence 4799999999999999999999999999999999986 4678899999999999999998863
No 20
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=99.82 E-value=8.5e-21 Score=154.36 Aligned_cols=72 Identities=36% Similarity=0.668 Sum_probs=64.9
Q ss_pred cCccchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCch-----HHHHHHHHHHHHHHHhhhhhhhhhhhhhcCC
Q psy13284 25 SSMLDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQ-----SEANKKFKEISEAYEVLSDEKKRRIYDDRGK 96 (230)
Q Consensus 25 ~~~~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~-----~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~ 96 (230)
..+.|||+||||+++|+.++||+|||+|++++||||++... +.|+++|++|++||+||+||.+|+.||..+.
T Consensus 7 ~~~~~~y~iLgv~~~a~~~eIk~aYr~l~~~~HPDk~~~~~~~~~~~~a~~~f~~i~~Ay~~L~dp~~R~~Yd~~~~ 83 (155)
T 2l6l_A 7 MPKKDWYSILGADPSANISDLKQKYQKLILMYHPDKQSTDVPAGTVEECVQKFIEIDQAWKILGNEETKREYDLQRC 83 (155)
T ss_dssp CCCSHHHHHHTCCTTCCHHHHHHHHHHHHHHHSCCCCCCCCTTHHHHHHHHHHHHHHHHHHHSSSHHHHCHHHHHHH
T ss_pred CCCCChhHhcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCchhHHHHHHHHHHHHHHHHHHcCCHHHHHHHHHHcc
Confidence 45689999999999999999999999999999999987542 3578999999999999999999999998653
No 21
>1iur_A KIAA0730 protein; DNAJ like domain, riken structural genomics/proteomics initiative, RSGI, structural genomics, unknown function; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=99.82 E-value=5.1e-21 Score=142.63 Aligned_cols=65 Identities=32% Similarity=0.477 Sum_probs=60.2
Q ss_pred cCccchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhh
Q psy13284 25 SSMLDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRR 89 (230)
Q Consensus 25 ~~~~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~ 89 (230)
....++|+||||+++|+.+|||+|||+|+++||||+++++.+.|+++|++|++||+||+|...|.
T Consensus 13 ~~~~~~y~vLgv~~~as~~eIKkaYrkla~~~HPDk~~~~~~~a~~~F~~I~~AYevL~~~~~r~ 77 (88)
T 1iur_A 13 SILKEVTSVVEQAWKLPESERKKIIRRLYLKWHPDKNPENHDIANEVFKHLQNEINRLEKQAFLD 77 (88)
T ss_dssp SCHHHHHHHHHHTTSSCSHHHHHHHHHHHHHTCTTTSSSCHHHHHHHHHHHHHHHHHHHHHTTCS
T ss_pred ccHHHHHHHhCCCCCCCHHHHHHHHHHHHHHHCCCCCCCchHHHHHHHHHHHHHHHHHHhhcccc
Confidence 44579999999999999999999999999999999999887789999999999999999987773
No 22
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=99.80 E-value=5.2e-21 Score=148.97 Aligned_cols=65 Identities=29% Similarity=0.460 Sum_probs=60.5
Q ss_pred ccchhhhhCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCC
Q psy13284 27 MLDYYKVLGVDKQSST--GDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRGK 96 (230)
Q Consensus 27 ~~dyY~iLgv~~~as~--~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~ 96 (230)
..|||+||||+++|+. ++||+|||+|++++||||+++ +++|++|++||+||+||.+|+.||.+|.
T Consensus 7 ~~~~Y~iLgv~~~as~~~~eIk~aYr~la~~~HPDk~~~-----~e~f~~I~~AYevL~d~~~R~~~~~~~~ 73 (114)
T 1gh6_A 7 SLQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGD-----EEKMKKMNTLYKKMEDGVKYAHQPDFGG 73 (114)
T ss_dssp HHHHHHHTTCCTTSCSCHHHHHHHHHHTTTTCCTTTCCT-----TTTTHHHHHHHHHHHHHHHSCCSSCCSC
T ss_pred hhhHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCCCCCcc-----HHHHHHHHHHHHHHCCHHHHHHhhhccc
Confidence 4699999999999999 999999999999999999986 3589999999999999999999998763
No 23
>1faf_A Large T antigen; J domain, HPD motif, anti-parallel hairpin of helices, viral protein; NMR {Murine polyomavirus} SCOP: a.2.3.1
Probab=99.80 E-value=6.3e-20 Score=133.89 Aligned_cols=67 Identities=21% Similarity=0.381 Sum_probs=59.7
Q ss_pred ccchhhhhCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCCC
Q psy13284 27 MLDYYKVLGVDKQ--SSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRGKGGY 99 (230)
Q Consensus 27 ~~dyY~iLgv~~~--as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~~g~ 99 (230)
..++|+||||+++ |+.++||+|||+|+++||||++++ +++|++|++||++|+|+.+|.. +.+|..++
T Consensus 10 ~~~~y~iLgl~~~~~a~~~eIk~aYr~la~~~HPDk~~~-----~~~f~~i~~AYe~L~~~~~r~~-~~~g~~~~ 78 (79)
T 1faf_A 10 KERLLELLKLPRQLWGDFGRMQQAYKQQSLLLHPDKGGS-----HALMQELNSLWGTFKTEVYNLR-MNLGGTGF 78 (79)
T ss_dssp HHHHHHHHTCCSSSTTCHHHHHHHHHHHHHHSSGGGSCC-----HHHHHHHHHHHHHHHHHHHHHT-TCCSSCCC
T ss_pred HHHHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCC-----HHHHHHHHHHHHHHhhHHHHHH-HhcCCccC
Confidence 3689999999999 999999999999999999999864 3689999999999999999988 55776553
No 24
>2pf4_E Small T antigen; PP2A, SV40, DNAJ, aalpha subunit, hydrolase regulat protein complex; 3.10A {Simian virus 40} PDB: 2pkg_C
Probab=99.78 E-value=2.8e-20 Score=154.62 Aligned_cols=64 Identities=30% Similarity=0.477 Sum_probs=57.5
Q ss_pred cchhhhhCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCC
Q psy13284 28 LDYYKVLGVDKQSS--TGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRGK 96 (230)
Q Consensus 28 ~dyY~iLgv~~~as--~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~ 96 (230)
.|||+||||+++|+ .++||+|||+||+++|||++++. ++|++|++||+||+||.+|+.||++|.
T Consensus 11 ~d~Y~vLGl~~~as~~~~eIKkAYRkLa~~~HPDk~~~~-----e~F~~I~~AYevLsdp~kR~~YD~~G~ 76 (174)
T 2pf4_E 11 LQLMDLLGLERSAWGNIPLMRKAYLKKCKEFHPDKGGDE-----EKMKKMNTLYKKMEDGVKYAHQPDFGG 76 (174)
T ss_dssp HHHHHTTTCCGGGTTCHHHHHHHHHHHGGGCSCC---CC-----TTTTHHHHHHHHHHHHHHHHTSCGGGG
T ss_pred ccHHHHcCCCCCCCcCHHHHHHHHHHHHHHHCcCCCCCH-----HHHHHHHHHHHHhCCHHHHHHHhccCC
Confidence 69999999999998 69999999999999999999762 589999999999999999999999985
No 25
>1fpo_A HSC20, chaperone protein HSCB; molecular chaperone; 1.80A {Escherichia coli} SCOP: a.2.3.1 a.23.1.1
Probab=99.77 E-value=3.2e-19 Score=147.78 Aligned_cols=69 Identities=22% Similarity=0.374 Sum_probs=62.5
Q ss_pred cchhhhhCCCCCC--CHHHHHHHHHHHHHHhCCCCCCCch----HHHHHHHHHHHHHHHhhhhhhhhhhhhhcCC
Q psy13284 28 LDYYKVLGVDKQS--STGDIKKAYRKLALKWHPDKNPDNQ----SEANKKFKEISEAYEVLSDEKKRRIYDDRGK 96 (230)
Q Consensus 28 ~dyY~iLgv~~~a--s~~eIKkaYrklalk~HPDkn~~~~----~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~ 96 (230)
+|||+||||++++ +.++||+|||+|+++||||+++... +.|.++|++|++||+||+||.+|..||....
T Consensus 1 ~d~y~lLgl~~~a~i~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l~ 75 (171)
T 1fpo_A 1 MDYFTLFGLPARYQLDTQALSLRFQDLQRQYHPDKFASGSQAEQLAAVQQSATINQAWQTLRHPLMRAEYLLSLH 75 (171)
T ss_dssp CHHHHHTTCCSSSCCCHHHHHHHHHHHHHHTCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHTT
T ss_pred CCHHHHCCCCCCCCCCHHHHHHHHHHHHHHhCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHcCchHHHHHHHHhc
Confidence 4899999999999 9999999999999999999987643 2467899999999999999999999998653
No 26
>3hho_A CO-chaperone protein HSCB homolog; structural genomics, IDP01304, center for structural genomics of infectious diseases, CSGI; 2.15A {Vibrio cholerae}
Probab=99.76 E-value=5.7e-19 Score=146.64 Aligned_cols=69 Identities=23% Similarity=0.412 Sum_probs=61.9
Q ss_pred ccchhhhhCCCCCCC--HHHHHHHHHHHHHHhCCCCCCCchH----HHHHHHHHHHHHHHhhhhhhhhhhhhhcC
Q psy13284 27 MLDYYKVLGVDKQSS--TGDIKKAYRKLALKWHPDKNPDNQS----EANKKFKEISEAYEVLSDEKKRRIYDDRG 95 (230)
Q Consensus 27 ~~dyY~iLgv~~~as--~~eIKkaYrklalk~HPDkn~~~~~----~a~~~F~~I~eAYevLsd~~kR~~YD~~g 95 (230)
..|||+||||+++++ .++||+|||+|+++||||+++...+ .|.++|++|++||+||+||.+|..||...
T Consensus 3 ~~d~Y~iLgl~~~a~id~~eIk~aYr~l~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vL~dp~~R~~Yd~~l 77 (174)
T 3hho_A 3 AMNYFELFGLPIQFELDGSLLSSQFRALQKRFHPDNFATASERDRLMAVQQAAQINDAYQTLKDPLRRAEYLLSL 77 (174)
T ss_dssp -CCHHHHTTCCSSSCCCHHHHHHHHHHHHHHHCGGGSTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCHHHHcCcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCcHHHHHHHHHHHHHHHHHHHHHcChHHHHHHHHHc
Confidence 469999999999988 9999999999999999999876532 37789999999999999999999999854
No 27
>1n4c_A Auxilin; four helix bundle, protein binding; NMR {Bos taurus} SCOP: a.2.3.1 PDB: 1xi5_J
Probab=99.76 E-value=2.4e-19 Score=149.92 Aligned_cols=64 Identities=27% Similarity=0.470 Sum_probs=59.1
Q ss_pred cchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchH--HHHHHHHHHHHHHHhhhhhhhhhhh
Q psy13284 28 LDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQS--EANKKFKEISEAYEVLSDEKKRRIY 91 (230)
Q Consensus 28 ~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~~--~a~~~F~~I~eAYevLsd~~kR~~Y 91 (230)
.|||+||||++.|+.++||+|||+|+++|||||++.... .|+++|++|++||+||+|+.+|+.|
T Consensus 117 ~d~Y~vLgv~~~As~~eIKkAYRklal~~HPDK~~~~~~e~~A~~~F~~I~eAYevLsD~~kR~~Y 182 (182)
T 1n4c_A 117 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPDKATGQPYEQYAKMIFMELNDAWSEFENQGQKPLY 182 (182)
T ss_dssp CCCCCCCCGGGGSSHHHHHHHHHHHHHHTCGGGGSSCTTHHHHHHHHHHHHHHHHHHHHHHSSCCC
T ss_pred cchhhcCCCCCCCCHHHHHHHHHHHHHHHCcCcCCCcchHHHHHHHHHHHHHHHHHHCCHHhhhhC
Confidence 589999999999999999999999999999999876432 3889999999999999999999987
No 28
>2qwo_B Putative tyrosine-protein phosphatase auxilin; chaperone-cochaperone complex, ATP-binding, nucleotide-bindi nucleus, phosphorylation, stress response; HET: ADP; 1.70A {Bos taurus} PDB: 2qwp_B* 2qwq_B* 2qwr_B* 2qwn_B* 1nz6_A
Probab=99.75 E-value=2.8e-19 Score=134.26 Aligned_cols=57 Identities=26% Similarity=0.409 Sum_probs=52.3
Q ss_pred cchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCch--HHHHHHHHHHHHHHHhhhh
Q psy13284 28 LDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQ--SEANKKFKEISEAYEVLSD 84 (230)
Q Consensus 28 ~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~--~~a~~~F~~I~eAYevLsd 84 (230)
.++|++|||++.|+.+|||+|||+||++||||||+++. ..|+++|++|++||+||.+
T Consensus 33 ~~~y~~Lgv~~~as~~eIKkAYRklal~~HPDK~~~~~~~~~A~~~F~~i~eAyevL~~ 91 (92)
T 2qwo_B 33 ETKWKPVGMADLVTPEQVKKVYRKAVLVVHPCKATGQPYEQYAKMIFMELNDAWSEFEN 91 (92)
T ss_dssp CCSCCCCCGGGSSSHHHHHHHHHHHHHHTCHHHHTTSTTHHHHHHHHHHHHHHHHHHHH
T ss_pred ccCCeecCCCCCCCHHHHHHHHHHHHHHHCcCCCCCchhHhHHHHHHHHHHHHHHHHHh
Confidence 48999999999999999999999999999999998653 2589999999999999986
No 29
>3bvo_A CO-chaperone protein HSCB, mitochondrial precurso; structural genomics medical relev protein structure initiative, PSI-2; 3.00A {Homo sapiens}
Probab=99.75 E-value=1.2e-18 Score=148.40 Aligned_cols=68 Identities=21% Similarity=0.383 Sum_probs=61.1
Q ss_pred ccchhhhhCCCCC--CCHHHHHHHHHHHHHHhCCCCCCCc----hHHHHHHHHHHHHHHHhhhhhhhhhhhhhc
Q psy13284 27 MLDYYKVLGVDKQ--SSTGDIKKAYRKLALKWHPDKNPDN----QSEANKKFKEISEAYEVLSDEKKRRIYDDR 94 (230)
Q Consensus 27 ~~dyY~iLgv~~~--as~~eIKkaYrklalk~HPDkn~~~----~~~a~~~F~~I~eAYevLsd~~kR~~YD~~ 94 (230)
..|||+||||+++ ++.++||+|||+|+++||||+++.. ++.|+++|++|++||+||+||.+|+.||..
T Consensus 42 ~~d~y~lLgv~~~~~a~~~eIk~aYr~L~~~~HPDk~~~~~~~e~~~a~~~f~~In~AY~vLsdp~~R~~Yd~~ 115 (207)
T 3bvo_A 42 TRDYFSLMDCNRSFRVDTAKLQHRYQQLQRLVHPDFFSQRSQTEKDFSEKHSTLVNDAYKTLLAPLSRGLYLLK 115 (207)
T ss_dssp TCCHHHHTTSCSCSCCCHHHHHHHHHHHHHHHCGGGGTTSCHHHHHHHHHHHHHHHHHHHHHHSHHHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCCCHHHHHHHHHHHHHHHCcCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHH
Confidence 4799999999996 7999999999999999999998754 234778999999999999999999999963
No 30
>2guz_A Mitochondrial import inner membrane translocase subunit TIM14; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=99.72 E-value=4e-18 Score=121.76 Aligned_cols=58 Identities=22% Similarity=0.293 Sum_probs=52.1
Q ss_pred CccchhhhhCCCC-CCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhh
Q psy13284 26 SMLDYYKVLGVDK-QSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKR 88 (230)
Q Consensus 26 ~~~dyY~iLgv~~-~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR 88 (230)
+..++|+||||++ +|+.++||+|||+|+++||||++.+ .++|++|++||++|+++..|
T Consensus 12 ~~~~~y~iLgl~~~~a~~~eIk~ayr~l~~~~HPDk~g~-----~~~f~~i~~Aye~L~~~~~r 70 (71)
T 2guz_A 12 NSKEALQILNLTENTLTKKKLKEVHRKIMLANHPDKGGS-----PFLATKINEAKDFLEKRGIS 70 (71)
T ss_dssp CHHHHHHHTTCCTTTCCHHHHHHHHHHHHHHHCGGGTCC-----HHHHHHHHHHHHHHHHHCCC
T ss_pred CHHHHHHHcCCCCCCCCHHHHHHHHHHHHHHHCCCCCCC-----HHHHHHHHHHHHHHhhhhhc
Confidence 4479999999999 7999999999999999999999754 25899999999999998765
No 31
>3apo_A DNAJ homolog subfamily C member 10; PDI family, thioredoxin, endoplasmic reticulum, oxidoreducta; 2.40A {Mus musculus}
Probab=99.72 E-value=1e-18 Score=171.80 Aligned_cols=76 Identities=49% Similarity=0.851 Sum_probs=40.9
Q ss_pred ccchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCCCCCCCCC
Q psy13284 27 MLDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRGKGGYEDSR 103 (230)
Q Consensus 27 ~~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~~g~~~~~ 103 (230)
..|||+||||+++|+.++||+|||+|+++||||+++.+ +.|+++|++|++||++|+||.+|+.||++|.+++....
T Consensus 20 ~~~~y~~lg~~~~a~~~~i~~ay~~l~~~~hpd~~~~~-~~~~~~f~~i~~ay~~L~~~~~r~~yd~~~~~~~~~~~ 95 (780)
T 3apo_A 20 DQNFYSLLGVSKTASSREIRQAFKKLALKLHPDKNPNN-PNAHGDFLKINRAYEVLKDEDLRKKYDKYGEKGLEDNQ 95 (780)
T ss_dssp ---CHHHHTCCTTCCHHHHHHHHCC------------------------CTHHHHHHSHHHHHHHTTC---------
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHHHHHHHCcCCCCCC-hHHHHHHHHHHHHHHHHcChHHHHHHHhhcccccccCC
Confidence 37999999999999999999999999999999999765 47889999999999999999999999999999887543
No 32
>3uo3_A J-type CO-chaperone JAC1, mitochondrial; structural genomics, PSI-biology, midwest center for structu genomics, MCSG, J-protein; 1.85A {Saccharomyces cerevisiae} PDB: 3uo2_A
Probab=99.71 E-value=1.8e-18 Score=144.51 Aligned_cols=68 Identities=21% Similarity=0.397 Sum_probs=61.4
Q ss_pred ccCccchhhhh------CCCC-CCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcC
Q psy13284 24 HSSMLDYYKVL------GVDK-QSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRG 95 (230)
Q Consensus 24 ~~~~~dyY~iL------gv~~-~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g 95 (230)
.+.+.|||+|| |+++ +|+.++||+|||+|+++||||+++. +.++|++|++||+||+||.+|..||...
T Consensus 7 ~~~~~d~y~ll~~~~p~~~~~~~a~~~eIk~aYr~la~~~HPDk~~~----a~~~f~~i~~AY~vL~dp~~R~~Yd~~l 81 (181)
T 3uo3_A 7 RRFTSTFYELFPKTFPKKLPIWTIDQSRLRKEYRQLQAQHHPDMAQQ----GSEQSSTLNQAYHTLKDPLRRSQYMLKL 81 (181)
T ss_dssp CCCSCCTGGGCTTTCTTCSCCSCCCHHHHHHHHHHHHHTCCTTSCCS----CSSGGGSHHHHHHHHHSHHHHHHHHHHH
T ss_pred CCCCCCHHHHhccccccCCCCCCCCHHHHHHHHHHHHHHhCcCCCcc----HHHHHHHHHHHHHHHcChHHHHHHHHHH
Confidence 45678999999 5765 9999999999999999999999986 5678999999999999999999999844
No 33
>3ag7_A Putative uncharacterized protein F9E10.5; J-domain, AN auxilin-like J-domain containing protein, JAC1, chloroplast accumulation response; 1.80A {Arabidopsis thaliana}
Probab=99.71 E-value=1e-18 Score=134.35 Aligned_cols=58 Identities=24% Similarity=0.345 Sum_probs=51.9
Q ss_pred cchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCC------chHHHHHHHHHHHHHHHhhhhhh
Q psy13284 28 LDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPD------NQSEANKKFKEISEAYEVLSDEK 86 (230)
Q Consensus 28 ~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~------~~~~a~~~F~~I~eAYevLsd~~ 86 (230)
.|||+||+++. |+.++||+|||+|+++|||||++. .++.|+++|++|++||+||+|+.
T Consensus 41 ~d~Y~vl~~~~-As~~eIKkAYRklal~~HPDK~~~~~~~~e~~~~A~~~F~~I~~AYevLsd~~ 104 (106)
T 3ag7_A 41 SGWKPVPLMDM-IEGNAVRKSYQRALLILHPDKLQQKGASANQKYMAEKVFELLQEAWDHFNTLG 104 (106)
T ss_dssp SCCCCCCGGGS-CSHHHHHHHHHHHHHHHCHHHHHHTTCCHHHHHHHHHHHHHHHHHHHHHTTTC
T ss_pred CCHHHHcCCCC-CCHHHHHHHHHHHHHHHCcCcCCCcccchhhHHHHHHHHHHHHHHHHHHcCcc
Confidence 69999999996 999999999999999999999763 12357899999999999999975
No 34
>2y4t_A DNAJ homolog subfamily C member 3; chaperone, endoplasmic reticulum, protein folding, tetratricopeptiderepeat, J domain, unfolded protein respons; 3.00A {Homo sapiens} PDB: 2y4u_A
Probab=99.33 E-value=6.9e-13 Score=117.92 Aligned_cols=67 Identities=51% Similarity=0.869 Sum_probs=58.0
Q ss_pred ccchhhhhCCCCCCCHHHHHHHHHHHHHHhCCCCCCCch--HHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q psy13284 27 MLDYYKVLGVDKQSSTGDIKKAYRKLALKWHPDKNPDNQ--SEANKKFKEISEAYEVLSDEKKRRIYDD 93 (230)
Q Consensus 27 ~~dyY~iLgv~~~as~~eIKkaYrklalk~HPDkn~~~~--~~a~~~F~~I~eAYevLsd~~kR~~YD~ 93 (230)
..++|++||+.+.++.++|+++|+++++++|||+.+.+. +.++++|++|.+||++|+|+++|..||+
T Consensus 381 ~~~~y~~lg~~~~~~~~~~~~~y~~~~l~~~pd~~~~~~~~~~a~~~~~~i~~ay~~L~d~~~r~~yd~ 449 (450)
T 2y4t_A 381 KRDYYKILGVKRNAKKQEIIKAYRKLALQWHPDNFQNEEEKKKAEKKFIDIAAAKEVLSDPEMRKKFDD 449 (450)
T ss_dssp SCCSGGGSCSSTTCCTTHHHHHHHHHHHHSCGGGCCSHHHHHHHHHHHHHHHHHHHHSSGGGGC-----
T ss_pred chhHHHHhCCCccCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHHHHhCCHHHHHhccC
Confidence 359999999999999999999999999999999998754 6789999999999999999999999996
No 35
>2guz_B Mitochondrial import inner membrane translocase subunit TIM16; DNAJ-fold, chaperone, protein transport; HET: FLC; 2.00A {Saccharomyces cerevisiae}
Probab=98.99 E-value=4.8e-10 Score=78.69 Aligned_cols=54 Identities=17% Similarity=0.126 Sum_probs=46.6
Q ss_pred ccchhhhhCCCCC---CCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhh
Q psy13284 27 MLDYYKVLGVDKQ---SSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDE 85 (230)
Q Consensus 27 ~~dyY~iLgv~~~---as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~ 85 (230)
..+.|.||||++. ++.++|+++||+|...+|||+.... -....|++|+++|...
T Consensus 3 ~~EA~~ILgv~~~~~~a~~~~Ik~~yr~Lm~~nhPDkGGS~-----yl~~ki~~Ake~l~~~ 59 (65)
T 2guz_B 3 LDESCKILNIEESKGDLNMDKINNRFNYLFEVNDKEKGGSF-----YLQSKVYRAAERLKWE 59 (65)
T ss_dssp HHHHHHHTTCCGGGTCCSHHHHHHHHHHHHHHTCGGGTCCH-----HHHHHHHHHHHHHHHH
T ss_pred HHHHHHHhCCCCCcCcCCHHHHHHHHHHHHHHhCCCCCCCH-----HHHHHHHHHHHHHHHH
Confidence 3578999999999 9999999999999999999997652 2566799999999754
No 36
>2pzi_A Probable serine/threonine-protein kinase PKNG; ATP-recognition, kinase-INH complex, rubredoxin fold, TPR domain, transferase; HET: AXX; 2.40A {Mycobacterium tuberculosis}
Probab=93.47 E-value=0.035 Score=53.37 Aligned_cols=49 Identities=16% Similarity=0.175 Sum_probs=37.8
Q ss_pred ccCccchhhhhCCCCCCCH--HHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHh
Q psy13284 24 HSSMLDYYKVLGVDKQSST--GDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEV 81 (230)
Q Consensus 24 ~~~~~dyY~iLgv~~~as~--~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYev 81 (230)
.....|||.+||++.++.. .+|++|||+||+..+++ +++++.|..|..|
T Consensus 625 ~~~~~~~~~~lG~~~~~~~lr~~~~~ayr~la~~~~~~---------~~r~~lvd~a~~v 675 (681)
T 2pzi_A 625 KDNKASTNHILGFPFTSHGLRLGVEASLRSLARVAPTQ---------RHRYTLVDMANKV 675 (681)
T ss_dssp TSCCCSSSEETTEESSHHHHHHHHHHHHHHHHHHCSSH---------HHHHHHHHHHHHH
T ss_pred HccCCCCcccCCCCCChHHHHHHHHHHHHHHHHhCCCh---------HHHHHHHHHhccc
Confidence 3444679999999776655 67999999999976543 3578888888876
No 37
>2lgw_A DNAJ homolog subfamily B member 2; J domain, HSJ1A, CO-chaperon, chaperone; NMR {Homo sapiens}
Probab=75.07 E-value=5 Score=29.14 Aligned_cols=23 Identities=48% Similarity=0.765 Sum_probs=19.9
Q ss_pred CccHHHHhccCCCCChhhhhhhh
Q psy13284 1 MLDYYKVLGVDKQSSTGDIKKAS 23 (230)
Q Consensus 1 ~~d~~~i~~~~~~~~~~~~~~~~ 23 (230)
|.||++||++....+.++|++.-
T Consensus 1 M~d~Y~iLgv~~~as~~eIk~aY 23 (99)
T 2lgw_A 1 MASYYEILDVPRSASADDIKKAY 23 (99)
T ss_dssp CCCHHHHSSSCTTSCHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCHHHHHHHH
Confidence 78999999999998888887754
No 38
>2o37_A Protein SIS1; HSP40, J-domain, cochaperone, APC90055.5, structural genomics, PSI-2, protein structure initiative; 1.25A {Saccharomyces cerevisiae}
Probab=69.48 E-value=1.5 Score=31.44 Aligned_cols=22 Identities=27% Similarity=0.528 Sum_probs=18.5
Q ss_pred ccHHHHhccCCCCChhhhhhhh
Q psy13284 2 LDYYKVLGVDKQSSTGDIKKAS 23 (230)
Q Consensus 2 ~d~~~i~~~~~~~~~~~~~~~~ 23 (230)
.||++||++......++|++.-
T Consensus 8 ~~~y~iLgv~~~as~~eIk~ay 29 (92)
T 2o37_A 8 TKLYDLLGVSPSANEQELKKGY 29 (92)
T ss_dssp CHHHHHHTCCTTCCHHHHHHHH
T ss_pred CCHHHHcCCCCCCCHHHHHHHH
Confidence 4899999999988888887754
No 39
>2dmx_A DNAJ homolog subfamily B member 8; DNAJ J domain, helix-turn-helix motif, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.29 E-value=9.4 Score=26.91 Aligned_cols=23 Identities=57% Similarity=0.846 Sum_probs=18.9
Q ss_pred CccHHHHhccCCCCChhhhhhhh
Q psy13284 1 MLDYYKVLGVDKQSSTGDIKKAS 23 (230)
Q Consensus 1 ~~d~~~i~~~~~~~~~~~~~~~~ 23 (230)
+.||++||+|......++|++.-
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ay 30 (92)
T 2dmx_A 8 MANYYEVLGVQASASPEDIKKAY 30 (92)
T ss_dssp CCCHHHHHTCCTTCCTTHHHHHH
T ss_pred CcCHHHHcCCCCCCCHHHHHHHH
Confidence 46899999999888888887643
No 40
>2ys8_A RAB-related GTP-binding protein RABJ; DNAJ domain, RAS-associated protein RAP1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=68.16 E-value=2.6 Score=30.03 Aligned_cols=47 Identities=19% Similarity=0.226 Sum_probs=29.8
Q ss_pred ccHHHHhccCCCCChhhhhhhhccCccchhhhhCCCCCC--------CHHHHHHHHHHHHH
Q psy13284 2 LDYYKVLGVDKQSSTGDIKKASHSSMLDYYKVLGVDKQS--------STGDIKKAYRKLAL 54 (230)
Q Consensus 2 ~d~~~i~~~~~~~~~~~~~~~~~~~~~dyY~iLgv~~~a--------s~~eIKkaYrklal 54 (230)
.||++||+|......++|++.-.... |-..|+. -..+|.+||.-|.-
T Consensus 27 ~~~y~iLgv~~~as~~eIk~aYr~la------~~~HPDk~~~~~~~~~f~~i~~Ay~~L~d 81 (90)
T 2ys8_A 27 KDSWDMLGVKPGASRDEVNKAYRKLA------VLLHPDKCVAPGSEDAFKAVVNARTALLK 81 (90)
T ss_dssp SSHHHHHTCCTTCCHHHHHHHHHHHH------HHHCTTTCCCTTHHHHHHHHHHHHHHHHH
T ss_pred CCHHHHcCcCCCCCHHHHHHHHHHHH------HHHCcCCCCCccHHHHHHHHHHHHHHHCC
Confidence 48999999999888888877443222 1222221 23467777777654
No 41
>2ctr_A DNAJ homolog subfamily B member 9; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=67.09 E-value=1.5 Score=31.05 Aligned_cols=22 Identities=50% Similarity=0.684 Sum_probs=18.5
Q ss_pred ccHHHHhccCCCCChhhhhhhh
Q psy13284 2 LDYYKVLGVDKQSSTGDIKKAS 23 (230)
Q Consensus 2 ~d~~~i~~~~~~~~~~~~~~~~ 23 (230)
.||++||+|......++|++.-
T Consensus 7 ~~~y~iLgv~~~as~~eIk~ay 28 (88)
T 2ctr_A 7 GSYYDILGVPKSASERQIKKAF 28 (88)
T ss_dssp CSHHHHHTCCTTCCHHHHHHHH
T ss_pred CCHHHHcCcCCCCCHHHHHHHH
Confidence 5899999999988888887744
No 42
>2cug_A Mkiaa0962 protein; DNAJ-like domain, structural genomics, molecular chaperone, NPPSFA; NMR {Mus musculus}
Probab=66.54 E-value=2.8 Score=29.65 Aligned_cols=22 Identities=55% Similarity=0.819 Sum_probs=18.0
Q ss_pred ccHHHHhccCCCCChhhhhhhh
Q psy13284 2 LDYYKVLGVDKQSSTGDIKKAS 23 (230)
Q Consensus 2 ~d~~~i~~~~~~~~~~~~~~~~ 23 (230)
.||++||++......++|++.-
T Consensus 17 ~d~y~iLgv~~~as~~eIk~ay 38 (88)
T 2cug_A 17 FDPYRVLGVSRTASQADIKKAY 38 (88)
T ss_dssp SCHHHHHTCCTTCCHHHHHHHH
T ss_pred CCHHHHcCcCCCCCHHHHHHHH
Confidence 4899999999988888887643
No 43
>2ctq_A DNAJ homolog subfamily C member 12; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=66.42 E-value=5.9 Score=29.28 Aligned_cols=22 Identities=41% Similarity=0.569 Sum_probs=18.6
Q ss_pred ccHHHHhccCCCCChhhhhhhh
Q psy13284 2 LDYYKVLGVDKQSSTGDIKKAS 23 (230)
Q Consensus 2 ~d~~~i~~~~~~~~~~~~~~~~ 23 (230)
.||++||++......++|++.-
T Consensus 20 ~d~Y~iLgv~~~as~~eIk~ay 41 (112)
T 2ctq_A 20 EDYYTLLGCDELSSVEQILAEF 41 (112)
T ss_dssp CCHHHHTTCCTTSCHHHHHHHH
T ss_pred CCHHHHcCCCCCCCHHHHHHHH
Confidence 5899999999998888887744
No 44
>1hdj_A Human HSP40, HDJ-1; molecular chaperone; NMR {Homo sapiens} SCOP: a.2.3.1
Probab=65.89 E-value=2.2 Score=29.29 Aligned_cols=22 Identities=41% Similarity=0.744 Sum_probs=18.4
Q ss_pred ccHHHHhccCCCCChhhhhhhh
Q psy13284 2 LDYYKVLGVDKQSSTGDIKKAS 23 (230)
Q Consensus 2 ~d~~~i~~~~~~~~~~~~~~~~ 23 (230)
.||++||++....+.++|++.-
T Consensus 3 ~~~y~iLgv~~~as~~~Ik~ay 24 (77)
T 1hdj_A 3 KDYYQTLGLARGASDEEIKRAY 24 (77)
T ss_dssp CCSHHHHTCCTTCCHHHHHHHH
T ss_pred CCHHHHcCCCCCCCHHHHHHHH
Confidence 4899999999988888887743
No 45
>2och_A Hypothetical protein DNJ-12; HSP40, J-domain, chaperone, APC90013.2, structural genomics, protein structure initiative; 1.86A {Caenorhabditis elegans} PDB: 2lo1_A
Probab=65.41 E-value=2.2 Score=28.98 Aligned_cols=22 Identities=45% Similarity=0.745 Sum_probs=18.1
Q ss_pred ccHHHHhccCCCCChhhhhhhh
Q psy13284 2 LDYYKVLGVDKQSSTGDIKKAS 23 (230)
Q Consensus 2 ~d~~~i~~~~~~~~~~~~~~~~ 23 (230)
.||++||++....+.++|++.-
T Consensus 8 ~~~y~iLgl~~~a~~~eIk~ay 29 (73)
T 2och_A 8 TGYYDVLGVKPDASDNELKKAY 29 (73)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHH
T ss_pred CCHHHHcCCCCCCCHHHHHHHH
Confidence 4799999999988888887643
No 46
>2ej7_A HCG3 gene; HCG3 protein, DNAJ domain, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens}
Probab=61.95 E-value=3.2 Score=28.72 Aligned_cols=23 Identities=57% Similarity=0.837 Sum_probs=19.0
Q ss_pred CccHHHHhccCCCCChhhhhhhh
Q psy13284 1 MLDYYKVLGVDKQSSTGDIKKAS 23 (230)
Q Consensus 1 ~~d~~~i~~~~~~~~~~~~~~~~ 23 (230)
+.||++||++......++|++.-
T Consensus 8 ~~~~y~iLgv~~~as~~eIk~ay 30 (82)
T 2ej7_A 8 MVDYYEVLDVPRQASSEAIKKAY 30 (82)
T ss_dssp SCCHHHHTTCCTTCCHHHHHHHH
T ss_pred CcCHHHHcCCCCCCCHHHHHHHH
Confidence 46899999999988888887743
No 47
>3apq_A DNAJ homolog subfamily C member 10; thioredoxin fold, DNAJ domain, endoplasmic reticulum, oxidor; 1.84A {Mus musculus}
Probab=57.57 E-value=5.4 Score=31.89 Aligned_cols=25 Identities=32% Similarity=0.675 Sum_probs=20.5
Q ss_pred CccHHHHhccCCCCChhhhhhhhcc
Q psy13284 1 MLDYYKVLGVDKQSSTGDIKKASHS 25 (230)
Q Consensus 1 ~~d~~~i~~~~~~~~~~~~~~~~~~ 25 (230)
|.||++||++....+.++++++-..
T Consensus 1 ~~~~y~~l~~~~~a~~~~ik~ay~~ 25 (210)
T 3apq_A 1 IQNFYSLLGVSKTASSREIRQAFKK 25 (210)
T ss_dssp CCCHHHHHTCCTTCCHHHHHHHHHH
T ss_pred CCCHHHHcCCCCCCCHHHHHHHHHH
Confidence 6799999999999888888775433
No 48
>1gh6_A Large T antigen; tumor suppressor, oncoprotein, antitumor protein; 3.20A {Simian virus 40} SCOP: a.2.3.1
Probab=51.87 E-value=14 Score=27.64 Aligned_cols=46 Identities=15% Similarity=0.283 Sum_probs=30.2
Q ss_pred ccHHHHhccCCCCCh--hhhhhhhccCccchhhhhCCCC-----CCCHHHHHHHHHHHH
Q psy13284 2 LDYYKVLGVDKQSST--GDIKKASHSSMLDYYKVLGVDK-----QSSTGDIKKAYRKLA 53 (230)
Q Consensus 2 ~d~~~i~~~~~~~~~--~~~~~~~~~~~~dyY~iLgv~~-----~as~~eIKkaYrkla 53 (230)
.||+.||+|...... ++|++.-....+ -..| ..-..+|.+||.-|.
T Consensus 8 ~~~Y~iLgv~~~as~~~~eIk~aYr~la~------~~HPDk~~~~e~f~~I~~AYevL~ 60 (114)
T 1gh6_A 8 LQLMDLLGLERSAWGNIPLMRKAYLKKCK------EFHPDKGGDEEKMKKMNTLYKKME 60 (114)
T ss_dssp HHHHHHTTCCTTSCSCHHHHHHHHHHTTT------TCCTTTCCTTTTTHHHHHHHHHHH
T ss_pred hhHHHHcCCCCCCCcCHHHHHHHHHHHHH------HHCCCCCccHHHHHHHHHHHHHHC
Confidence 479999999988877 777775433221 1222 234567888888875
No 49
>2l6l_A DNAJ homolog subfamily C member 24; DPH4, Zn-CSL, J-domain, chaperone; NMR {Homo sapiens}
Probab=40.30 E-value=8.6 Score=29.90 Aligned_cols=22 Identities=32% Similarity=0.673 Sum_probs=18.4
Q ss_pred ccHHHHhccCCCCChhhhhhhh
Q psy13284 2 LDYYKVLGVDKQSSTGDIKKAS 23 (230)
Q Consensus 2 ~d~~~i~~~~~~~~~~~~~~~~ 23 (230)
.||++||++....+.++|++.-
T Consensus 10 ~~~y~iLgv~~~a~~~eIk~aY 31 (155)
T 2l6l_A 10 KDWYSILGADPSANISDLKQKY 31 (155)
T ss_dssp SHHHHHHTCCTTCCHHHHHHHH
T ss_pred CChhHhcCCCCCCCHHHHHHHH
Confidence 5899999999988888887744
No 50
>2cqn_A Formin-binding protein 3; FF domain, structural genomics, NPPSFA, national project on protein structural and functional analyses; NMR {Homo sapiens} SCOP: a.159.2.1
Probab=40.21 E-value=46 Score=23.09 Aligned_cols=55 Identities=18% Similarity=0.304 Sum_probs=37.4
Q ss_pred CCHHHHHHHHHHHHHHhCCCCCCCc-hHHHHHHHHHHHHHHHhhhh-hhhhhhhhhcC
Q psy13284 40 SSTGDIKKAYRKLALKWHPDKNPDN-QSEANKKFKEISEAYEVLSD-EKKRRIYDDRG 95 (230)
Q Consensus 40 as~~eIKkaYrklalk~HPDkn~~~-~~~a~~~F~~I~eAYevLsd-~~kR~~YD~~g 95 (230)
.-+..++.+++.+.+...|...... =+.+..+|.... +|..|.+ ..++.+|+.|-
T Consensus 6 ~r~rrl~~~F~~mLk~~~p~I~~~s~We~vr~~~e~~~-~fkav~~E~eR~~lFeeYi 62 (77)
T 2cqn_A 6 SGMKRKESAFKSMLKQAAPPIELDAVWEDIRERFVKEP-AFEDITLESERKRIFKDFM 62 (77)
T ss_dssp CSHHHHHHHHHHHHHTCSSCCCTTCCHHHHHHHHTTSH-HHHTCCCHHHHHHHHHHHH
T ss_pred HHHHHHHHHHHHHHHhcCCCCCCCCCHHHHHHHHccCH-HHHhcCCHHHHHHHHHHHH
Confidence 3466788889988888777665443 245666666554 7888855 56677888763
No 51
>2yua_A Williams-beuren syndrome chromosome region 18 protein; J domain, all helix protein, chaperone, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=37.99 E-value=33 Score=24.44 Aligned_cols=22 Identities=32% Similarity=0.504 Sum_probs=18.6
Q ss_pred ccHHHHhccCCCCChhhhhhhh
Q psy13284 2 LDYYKVLGVDKQSSTGDIKKAS 23 (230)
Q Consensus 2 ~d~~~i~~~~~~~~~~~~~~~~ 23 (230)
.||++||+|......++|++.-
T Consensus 17 ~~~Y~vLgv~~~as~~eIk~ay 38 (99)
T 2yua_A 17 TALYDLLGVPSTATQAQIKAAY 38 (99)
T ss_dssp SHHHHHHTCCTTCCHHHHHHHH
T ss_pred cCHHHHcCCCCCCCHHHHHHHH
Confidence 5799999999988888887754
No 52
>3lz8_A Putative chaperone DNAJ; structure genomics, structural genomics, PSI-2, protein STRU initiative; 2.90A {Klebsiella pneumoniae subsp} PDB: 2kqx_A
Probab=36.43 E-value=7.4 Score=34.46 Aligned_cols=26 Identities=35% Similarity=0.503 Sum_probs=0.0
Q ss_pred ccHHHHhccCCCCChhhhhhhhccCc
Q psy13284 2 LDYYKVLGVDKQSSTGDIKKASHSSM 27 (230)
Q Consensus 2 ~d~~~i~~~~~~~~~~~~~~~~~~~~ 27 (230)
.||++||++....+.++|+++-....
T Consensus 28 ~d~Y~vLgv~~~as~~eIk~aYr~la 53 (329)
T 3lz8_A 28 KDYYAILGVQPTDDLKTIKTAYRRLA 53 (329)
T ss_dssp --------------------------
T ss_pred cCHHHHcCcCCCCCHHHHHHHHHHHH
Confidence 58999999999888888877554433
No 53
>1wjz_A 1700030A21RIK protein; J-domain, DNAJ like protein, structural genomics, riken structural genomics/proteomics initiative, RSGI, chaperone; NMR {Mus musculus} SCOP: a.2.3.1
Probab=35.69 E-value=41 Score=23.40 Aligned_cols=22 Identities=32% Similarity=0.673 Sum_probs=18.5
Q ss_pred ccHHHHhccCCCCChhhhhhhh
Q psy13284 2 LDYYKVLGVDKQSSTGDIKKAS 23 (230)
Q Consensus 2 ~d~~~i~~~~~~~~~~~~~~~~ 23 (230)
.||++||+|......++|++.-
T Consensus 16 ~~~y~iLgv~~~as~~eIk~aY 37 (94)
T 1wjz_A 16 KDWYSILGADPSANMSDLKQKY 37 (94)
T ss_dssp SCHHHHTTCCTTCCHHHHHHHH
T ss_pred CChHHHcCCCCCCCHHHHHHHH
Confidence 4899999999988888887754
No 54
>4a3n_A Transcription factor SOX-17; 2.40A {Homo sapiens} SCOP: a.21.1.0
Probab=34.50 E-value=74 Score=20.57 Aligned_cols=41 Identities=22% Similarity=0.278 Sum_probs=29.0
Q ss_pred HHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy13284 46 KKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYD 92 (230)
Q Consensus 46 KkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD 92 (230)
.+.+|...+.-||+... .+.-+.|.+.|..|++.+|....+
T Consensus 14 ~~~~r~~~~~~~p~~~~------~eisk~lg~~Wk~ls~~eK~~y~~ 54 (71)
T 4a3n_A 14 AKDERKRLAQQNPDLHN------AELSKMLGKSWKALTLAEKRPFVE 54 (71)
T ss_dssp HHHHHHHHHTTCTTSCH------HHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCH------HHHHHHHHHHHhcCCHHHHHHHHH
Confidence 45667777778887652 346778899999999877655443
No 55
>2b7e_A PRE-mRNA processing protein PRP40; structural protein; NMR {Saccharomyces cerevisiae} SCOP: a.159.2.1
Probab=32.55 E-value=44 Score=22.26 Aligned_cols=49 Identities=12% Similarity=0.202 Sum_probs=32.7
Q ss_pred HHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHH---HHHHHhhhh-hh-hhhhhhhcC
Q psy13284 43 GDIKKAYRKLALKWHPDKNPDNQSEANKKFKEI---SEAYEVLSD-EK-KRRIYDDRG 95 (230)
Q Consensus 43 ~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I---~eAYevLsd-~~-kR~~YD~~g 95 (230)
+|..+||.+|.+...-|-+=. =++..+.| ..-|.+|.| |. +++.|+.|-
T Consensus 3 eEae~aF~~lL~~~~V~s~ws----weqamr~i~i~DPrY~al~d~~~eRK~~Fe~Y~ 56 (59)
T 2b7e_A 3 MEAEKEFITMLKENQVDSTWS----FSRIISELGTRDPRYWMVDDDPLWKKEMFEKYL 56 (59)
T ss_dssp THHHHHHHHHHHHTTCCSSCC----HHHHHHHHHHHCTHHHHSCCCHHHHHHHHHHHH
T ss_pred hHHHHHHHHHHHHcCCCCCCc----HHHHHHHhccCCCccccccCCHHHHHHHHHHHH
Confidence 577889999988775444322 23445555 467899996 65 567788763
No 56
>1hry_A Human SRY; DNA, DNA-binding protein, DNA binding protein/DNA complex; HET: DNA; NMR {Homo sapiens} SCOP: a.21.1.1 PDB: 1hrz_A*
Probab=32.19 E-value=88 Score=20.64 Aligned_cols=41 Identities=12% Similarity=0.248 Sum_probs=28.3
Q ss_pred HHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy13284 46 KKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYD 92 (230)
Q Consensus 46 KkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD 92 (230)
.+.+|...+.-||+.... +.-+.|.+.|..|++.+|....+
T Consensus 16 ~~~~r~~~~~~~p~~~~~------eisk~lg~~Wk~ls~~eK~~y~~ 56 (76)
T 1hry_A 16 SRDQRRKMALENPRMRNS------EISKQLGYQWKMLTEAEKWPFFQ 56 (76)
T ss_dssp HHHHHHHHHHHCSCCSSS------HHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHCcCCCHH------HHHHHHHhHHHhCCHHHHHHHHH
Confidence 455666677789987543 34678899999998776654433
No 57
>2ctw_A DNAJ homolog subfamily C member 5; J-domain, chaperone, helix-turn-helix, structural genomics, NPPSFA; NMR {Mus musculus}
Probab=31.89 E-value=66 Score=23.28 Aligned_cols=22 Identities=45% Similarity=0.742 Sum_probs=18.2
Q ss_pred ccHHHHhccCCCCChhhhhhhh
Q psy13284 2 LDYYKVLGVDKQSSTGDIKKAS 23 (230)
Q Consensus 2 ~d~~~i~~~~~~~~~~~~~~~~ 23 (230)
.||++||+|......++|++.-
T Consensus 17 ~~~Y~vLgv~~~as~~eIk~aY 38 (109)
T 2ctw_A 17 ESLYHVLGLDKNATSDDIKKSY 38 (109)
T ss_dssp CCHHHHHTCCTTCCHHHHHHHH
T ss_pred CCHHHHcCcCCCCCHHHHHHHH
Confidence 4799999999988888887743
No 58
>1wz6_A HMG-box transcription factor BBX; bobby SOX homolog, HMG_BOX domain, structural genomics, NPPSFA, riken structural genomics/proteomics initiative; NMR {Mus musculus}
Probab=31.48 E-value=81 Score=21.26 Aligned_cols=41 Identities=24% Similarity=0.300 Sum_probs=29.1
Q ss_pred HHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy13284 46 KKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYD 92 (230)
Q Consensus 46 KkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD 92 (230)
.+.+|...+.-||+.... +.-+.|.+.|..|++.+|....+
T Consensus 19 ~~~~r~~~~~~~p~~~~~------eisk~lg~~Wk~ls~~eK~~y~~ 59 (82)
T 1wz6_A 19 CKRHRSLVRQEHPRLDNR------GATKILADWWAVLDPKEKQKYTD 59 (82)
T ss_dssp HHHHHHHHHHHCSSSCTT------HHHHHHHHHHHTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCHH------HHHHHHHHHHhhCCHHHHHHHHH
Confidence 456677777889986543 35678899999999877654443
No 59
>1uzc_A Hypothetical protein FLJ21157; nuclear protein, structure, transcription, phosphopeptide recognition, RNA polymerase II carboxyl- terminal domain; NMR {Homo sapiens} SCOP: a.159.2.1 PDB: 2kzg_A 2lks_A 2l9v_A
Probab=29.19 E-value=62 Score=22.09 Aligned_cols=54 Identities=17% Similarity=0.254 Sum_probs=31.5
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhh-hhhhhhhhhc
Q psy13284 39 QSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSD-EKKRRIYDDR 94 (230)
Q Consensus 39 ~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd-~~kR~~YD~~ 94 (230)
-++.+|.+.+|++|....+-+-.-.- +.+.+++. =..-|.+|.+ ..++++|+.|
T Consensus 11 ~~t~eea~~~F~~LL~e~~V~~~~tW-e~~~~~i~-~DpRY~al~~~~eRk~~F~ey 65 (71)
T 1uzc_A 11 WNTKEEAKQAFKELLKEKRVPSNASW-EQAMKMII-NDPRYSALAKLSEKKQAFNAY 65 (71)
T ss_dssp CCSHHHHHHHHHHHHHHTTCCTTCCH-HHHHHHHH-TSGGGGGCSSHHHHHHHHHHH
T ss_pred CCCHHHHHHHHHHHHHHcCcCCCCCH-HHHHHHHc-cCccccccCCHHHHHHHHHHH
Confidence 46899999999999988754333221 11111111 1235667765 3555667765
No 60
>3f27_D Transcription factor SOX-17; protein-DNA complex, HMG domain, endodermal, activator, DNA- nucleus, transcription regulation, transcrip complex; HET: DNA; 2.75A {Mus musculus} SCOP: a.21.1.1 PDB: 2yul_A
Probab=28.73 E-value=1.1e+02 Score=20.58 Aligned_cols=41 Identities=22% Similarity=0.278 Sum_probs=29.4
Q ss_pred HHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy13284 46 KKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYD 92 (230)
Q Consensus 46 KkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD 92 (230)
.+.+|...+.-||+... .+.-+.|.+.|..|++.++....+
T Consensus 18 ~~~~r~~~~~~~p~~~~------~eisk~lg~~Wk~ls~~eK~~y~~ 58 (83)
T 3f27_D 18 AKDERKRLAQQNPDLHN------AELSKMLGKSWKALTLAEKRPFVE 58 (83)
T ss_dssp HHHHHHHHHHHCSSSCH------HHHHHHHHHHHHHSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCH------HHHHHHHHHHHhcCCHHHHHHHHH
Confidence 45677777888998652 346778899999998877654433
No 61
>2cs1_A PMS1 protein homolog 1; DNA mismatch repair protein PMS1, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=27.11 E-value=1.1e+02 Score=21.28 Aligned_cols=42 Identities=21% Similarity=0.253 Sum_probs=28.7
Q ss_pred HHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q psy13284 46 KKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDD 93 (230)
Q Consensus 46 KkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~ 93 (230)
.+..|...+.-||+.. ..+.-+.|.+.|..|++.+|....+.
T Consensus 19 ~~~~r~~~~~~~p~~~------~~eisk~lg~~Wk~ls~eeK~~y~~~ 60 (92)
T 2cs1_A 19 VQDHRPQFLIENPKTS------LEDATLQIEELWKTLSEEEKLKYEEK 60 (92)
T ss_dssp HHHHHHHHHHHCCSSC------HHHHHHHHHHHHHSSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCC------HHHHHHHHHHHHhcCCHHHHHHHHHH
Confidence 4455666777788864 23567788999999988776554443
No 62
>2kvo_A Photosystem II reaction center PSB28 protein; membrane, photosynthesis, thylakoid, structural genom 2, protein structure initiative; NMR {Synechocystis SP}
Probab=25.72 E-value=72 Score=24.25 Aligned_cols=27 Identities=22% Similarity=0.460 Sum_probs=21.1
Q ss_pred CeEEeeecceeecCeEEEEEEEEeecC
Q psy13284 204 AVKTTSTSTRFIDGKKVTTKKMAFMNS 230 (230)
Q Consensus 204 ~~~~~stst~~vnG~~~~tk~~~~~~~ 230 (230)
-...+-.+.|+||||.....-+.+|+|
T Consensus 60 ei~t~~v~aKFvnGkp~~iEa~y~m~s 86 (120)
T 2kvo_A 60 EIITREVKGKFINGRPTAIEATVILNS 86 (120)
T ss_dssp EEEECCEEEEEETTEEEEEEEEEEECS
T ss_pred cEEEEecceEEECCceeEEEEEEEECC
Confidence 455666788999999988887777764
No 63
>2d7l_A WD repeat and HMG-box DNA binding protein 1; high mobility group box domain, helix-turn-helix, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=25.72 E-value=1.1e+02 Score=21.00 Aligned_cols=46 Identities=24% Similarity=0.214 Sum_probs=33.6
Q ss_pred HHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcCC
Q psy13284 46 KKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRGK 96 (230)
Q Consensus 46 KkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g~ 96 (230)
-+.+|...+.-||+.. + ..+.-+.|.+.|..|++.+|....+..-.
T Consensus 17 ~~e~R~~ik~~~P~~~-~----~~eisK~lge~Wk~ls~eeK~~y~~~A~~ 62 (81)
T 2d7l_A 17 LEENRSNILSDNPDFS-D----EADIIKEGMIRFRVLSTEERKVWANKAKG 62 (81)
T ss_dssp HHHHHHHHHHHCTTCC-S----HHHHHHHHHHHHSSSCHHHHHHHHHHTTS
T ss_pred HHHHHHHHHHHCCCCc-h----hHHHHHHHHHHHHcCCHHHHHHHHHHHHH
Confidence 4567777888899875 2 23467889999999998887766655433
No 64
>1ny9_A Transcriptional activator TIPA-S; all alpha, globin like; NMR {Streptomyces lividans} SCOP: a.181.1.1
Probab=23.14 E-value=85 Score=23.59 Aligned_cols=52 Identities=25% Similarity=0.193 Sum_probs=30.7
Q ss_pred CCCCCC-CHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhhcC
Q psy13284 35 GVDKQS-STGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDDRG 95 (230)
Q Consensus 35 gv~~~a-s~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~~g 95 (230)
|++++. ...+|-+.++.+...+.++..+ +.+..|.+-|. .||.-+..||++|
T Consensus 71 g~~p~s~eaq~l~~~h~~~l~~~~~~~s~-------e~~~~L~~mYv--~D~rF~~~~d~~~ 123 (143)
T 1ny9_A 71 GEPADSEGAMDAAEDHRQGIARNHYDCGY-------EMHTCLGEMYV--SDERFTRNIDAAK 123 (143)
T ss_dssp TCCTTCHHHHHHHHHHHHHHHHHSSCCCH-------HHHHHHHHHTT--STHHHHHHHGGGS
T ss_pred CCCCCCHHHHHHHHHHHHHHHHhCCCCCH-------HHHHHHHHHHh--cCHHHHHhHcccC
Confidence 554432 3333344455554454555432 35677777763 6899999999975
No 65
>2eqz_A High mobility group protein B3; HMG-box domain, mobility group protein 2A, structural genomics, NPPSFA; NMR {Homo sapiens}
Probab=22.72 E-value=1.4e+02 Score=20.30 Aligned_cols=43 Identities=19% Similarity=0.231 Sum_probs=29.2
Q ss_pred HHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy13284 46 KKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYD 92 (230)
Q Consensus 46 KkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD 92 (230)
-+..|...+.-||+.... ..+.-+.|.+.|..|++.++....+
T Consensus 27 ~~~~r~~~k~~~p~~~~~----~~eisk~lg~~Wk~ls~~eK~~y~~ 69 (86)
T 2eqz_A 27 VQTCREEHKKKNPEVPVN----FAEFSKKCSERWKTMSGKEKSKFDE 69 (86)
T ss_dssp HHHHHHHHHHHCTTSCCC----HHHHHHHHHHHHHSSCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCCc----HHHHHHHHHHHHHhCCHHHHHHHHH
Confidence 345566667778886532 1346778999999999877655443
No 66
>1qqr_A Streptokinase domain B; non-proteolytic, plasminogen activation, fibrinolysis, hydrolase activator; 2.30A {Streptococcus dysgalactiae subsp} SCOP: d.15.5.1 PDB: 1c4p_A
Probab=22.52 E-value=34 Score=26.65 Aligned_cols=31 Identities=16% Similarity=0.255 Sum_probs=27.5
Q ss_pred hhhhhCCCCCCCHHHHHHHHHHHHHHhCCCC
Q psy13284 30 YYKVLGVDKQSSTGDIKKAYRKLALKWHPDK 60 (230)
Q Consensus 30 yY~iLgv~~~as~~eIKkaYrklalk~HPDk 60 (230)
.+..|-|....+.+|++++-..+..++||+-
T Consensus 34 ~l~~k~ig~~Its~eL~~~AqeiL~q~hp~Y 64 (138)
T 1qqr_A 34 LLKTLAIGDTITSQELLAQAQSILNKNHPGY 64 (138)
T ss_dssp EEEEECTTCEEEHHHHHHHHHHHHHHHSTTE
T ss_pred hhcccccCcccCHHHHHHHHHHHHHhcCCCc
Confidence 3788888889999999999999999999985
No 67
>1i11_A Transcription factor SOX-5; HMG BOX, DNA bending, DNA recognition, chromatin, DNA binding protein, DNA sequence specific, testis determining.; NMR {Mus musculus} SCOP: a.21.1.1
Probab=22.29 E-value=70 Score=21.53 Aligned_cols=41 Identities=20% Similarity=0.337 Sum_probs=27.5
Q ss_pred HHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy13284 46 KKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYD 92 (230)
Q Consensus 46 KkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD 92 (230)
.+.+|...+.-||+... .+.-+.|.+.|..|++.++...++
T Consensus 16 ~~~~r~~~~~~~p~~~~------~eisk~lg~~Wk~ls~eeK~~y~~ 56 (81)
T 1i11_A 16 AKDERRKILQAFPDMHN------SNISKILGSRWKAMTNLEKQPYYE 56 (81)
T ss_dssp HHHHHHHHHTTCSSCCH------HHHHHHHHHHHTTSCSGGGHHHHH
T ss_pred HHHHHHHHHHHCCCCCH------HHHHHHHHhhhhhCCHHHHHHHHH
Confidence 34556666677887542 346778899999998877655444
No 68
>1wgf_A Upstream binding factor 1; transcription factor, DNA binding, structural genomics, riken structural genomics/proteomics initiative, RSGI; NMR {Mus musculus} SCOP: a.21.1.1
Probab=22.19 E-value=74 Score=22.07 Aligned_cols=42 Identities=14% Similarity=0.215 Sum_probs=30.0
Q ss_pred HHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q psy13284 46 KKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDD 93 (230)
Q Consensus 46 KkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~ 93 (230)
.+.+|...+.-||+... .+.-+.|.+.|..|++.++....+.
T Consensus 32 ~~~~r~~~k~~~P~~~~------~eisk~lg~~Wk~ls~eeK~~Y~~~ 73 (90)
T 1wgf_A 32 SEEKRRQLQEERPELSE------SELTRLLARMWNDLSEKKKAKYKAR 73 (90)
T ss_dssp HHHTHHHHHHHCTTSCH------HHHHHHHHHHHHHSCHHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCH------HHHHHHHHHHHHhCCHHHHHHHHHH
Confidence 45566677778888542 3567889999999998877655554
No 69
>2crj_A SWI/SNF-related matrix-associated actin- dependent regulator of chromatin subfamily...; structural DNA-binding protein BRAF35, DNA-bending; NMR {Mus musculus}
Probab=21.70 E-value=84 Score=21.80 Aligned_cols=39 Identities=21% Similarity=0.212 Sum_probs=25.5
Q ss_pred HHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhh
Q psy13284 46 KKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRI 90 (230)
Q Consensus 46 KkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~ 90 (230)
.+..|...+.-||+... .+.-+.|.+.|..|++.+|...
T Consensus 19 ~~~~r~~~~~~~p~~~~------~eisk~lg~~Wk~ls~eeK~~Y 57 (92)
T 2crj_A 19 LNERREQIRTRHPDLPF------PEITKMLGAEWSKLQPAEKQRY 57 (92)
T ss_dssp HHHHHHHHHHHCTTCCH------HHHHHHHHHHHHTCCTTHHHHH
T ss_pred HHHHHHHHHHHCCCCCH------HHHHHHHHHHHHcCCHHHHHHH
Confidence 34566666777887542 3456778888888887765443
No 70
>4euw_A Transcription factor SOX-9; protein-DNA complex, HMG domain, activator, DNA-binding, NUC transcription; HET: DNA; 2.77A {Homo sapiens}
Probab=20.75 E-value=91 Score=22.41 Aligned_cols=41 Identities=17% Similarity=0.272 Sum_probs=29.8
Q ss_pred HHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhh
Q psy13284 46 KKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYD 92 (230)
Q Consensus 46 KkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD 92 (230)
.+.+|...+.-||+... .+.-+.|.+.|..|++.+|....+
T Consensus 41 ~~~~r~~~k~~~P~~~~------~eisk~lg~~Wk~ls~eeK~~Y~~ 81 (106)
T 4euw_A 41 AQAARRKLADQYPHLHN------AELSKTLGKLWRLLNESEKRPFVE 81 (106)
T ss_dssp HHHHHHHHHHHCTTSCH------HHHHHHHHHHHTTCCHHHHHHHHH
T ss_pred HHHHHHHHHHHCCCCCH------HHHHHHHHHHHHcCCHHHHHHHHH
Confidence 56777778888997642 256778899999998877655444
No 71
>1cf7_A Protein (transcription factor E2F-4); E2F, winged-helix, DNA-binding domain, cell cycle, transcription/DNA complex; HET: DNA; 2.60A {Homo sapiens} SCOP: a.4.5.17
Probab=20.25 E-value=37 Score=23.56 Aligned_cols=43 Identities=28% Similarity=0.360 Sum_probs=28.4
Q ss_pred CCCHHHHHHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhhhh
Q psy13284 39 QSSTGDIKKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIYDD 93 (230)
Q Consensus 39 ~as~~eIKkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~YD~ 93 (230)
+.+...+-+.+-+|... +|+..- .|++|.+.|.-.++|++||-
T Consensus 9 ~~SL~~lt~kFi~l~~~-~~~~~i-----------~l~~aa~~L~v~~kRRiYDI 51 (76)
T 1cf7_A 9 EKSLGLLTTKFVSLLQE-AKDGVL-----------DLKLAADTLAVRQKRRIYDI 51 (76)
T ss_dssp TTCHHHHHHHHHHHHHH-SSTTEE-----------EHHHHHHHTTTCCTHHHHHH
T ss_pred cCcHHHHHHHHHHHHHh-CCCCcC-----------cHHHHHHHhCCccceehhhH
Confidence 45777778888887654 344322 25666677765478999995
No 72
>3u2b_C Transcription factor SOX-4; HMG domain, transcriptional regulation, transcription-DNA CO; HET: DNA; 2.40A {Mus musculus} SCOP: a.21.1.1
Probab=20.09 E-value=93 Score=20.64 Aligned_cols=40 Identities=18% Similarity=0.294 Sum_probs=26.9
Q ss_pred HHHHHHHHHHhCCCCCCCchHHHHHHHHHHHHHHHhhhhhhhhhhh
Q psy13284 46 KKAYRKLALKWHPDKNPDNQSEANKKFKEISEAYEVLSDEKKRRIY 91 (230)
Q Consensus 46 KkaYrklalk~HPDkn~~~~~~a~~~F~~I~eAYevLsd~~kR~~Y 91 (230)
.+.+|...+.-||+... .+.-+.|.+.|..|++.++....
T Consensus 14 ~~~~r~~~~~~~p~~~~------~eisk~lg~~Wk~ls~~eK~~y~ 53 (79)
T 3u2b_C 14 SQIERRKIMEQSPDMHN------AEISKRLGKRWKLLKDSDKIPFI 53 (79)
T ss_dssp HHHHHHHHHTTSTTSCH------HHHHHHHHHHHHHSCHHHHHHHH
T ss_pred HHHHHHHHHHHCcCCCH------HHHHHHHHHHHHhCCHHHHHHHH
Confidence 45566667777887542 24677788888888877655443
Done!